BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781066|ref|YP_003065479.1| putative lysyl-tRNA synthetase
protein [Candidatus Liberibacter asiaticus str. psy62]
         (355 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|300857281|ref|YP_003782265.1| lysyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437396|gb|ADK17163.1| lysyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 503

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 171/369 (46%), Gaps = 24/369 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              LKR  I  S+RE+     +IE+++ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQRYVDLIINSDVRDTFLKRTAIIKSIREFLDNKDYIEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F+T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILSSIAGGAA-AKPFTTH---HNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKCFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PE+T +E Y A   Y  +M+   N+I     +V       +++   +      
Sbjct: 260 GMDIRHNPEYTSIELYEAFADYNDMMEITENMIAYVCEKVLGTTKVVYEDTEIDFKPPWN 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ EA  ++AN+D     D+ +  +         +  ++   D +  DI   +  E  
Sbjct: 320 RITMVEAVKKFANVDFDEVKDDEEAREIAKGKHIELKKELK---DCSKGDILDAMFEEFC 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E        T +  YP   S L      +P+FT+RFE +    E+CNA  EL DPI QR 
Sbjct: 377 EEK--FIQPTFVMDYPVEISPLTKKKRGNPKFTERFEGFIFGREICNAYSELNDPIVQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E++   +E Y +DEDFL  L   MP + G+ +G DRLVM +T A +I +VI  
Sbjct: 435 RFMQQLKERELGDDEAYMMDEDFLNALEIGMPPTGGLGIGVDRLVMFLTNATSIRDVILF 494

Query: 346 PFSQSNQEE 354
           P  + NQ++
Sbjct: 495 PTMKPNQQQ 503


>gi|323703647|ref|ZP_08115289.1| lysyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531362|gb|EGB21259.1| lysyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 509

 Score =  362 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 165/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y  +  F+E+++ 
Sbjct: 155 LRPLPEKWHGLKDVDLRYRQRYVDLIVNPEVKQTFVIRSRIVRAIRNYLDQRGFLEVETP 214

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ +PE   K+LL  G +K++     +RN 
Sbjct: 215 MMHPIAGGAS-ARPFITH---HNALDMNLYMRIAPELYLKRLLVGGFDKVYEINRNFRNE 270

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y+A+  Y  +M    ++I   A  V       ++ V  +      
Sbjct: 271 GISTKHNPEFTSLELYQAYGDYHDMMDLTEDLISHVAREVLGTTTLEYEGVEISLAKPWR 330

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + E    ++ +D           D    Y  A+  G+ +     W DI + +  E +
Sbjct: 331 RVPMLEIVKEHSGLD------FTQLKDDQAAYDAAKGLGLEIEPGAKWGDILNTVFEEMV 384

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA  +   P  T RFEL+    E+ NA  EL DPI+Q+ 
Sbjct: 385 EEK--LIQPTFVIDYPVEISPLAKRHKEHPELTYRFELFIYGREMANAFSELNDPIDQKG 442

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++++++   +E    DEDF+  L   MP + G+ +G DRLVML+T +++I +VI  
Sbjct: 443 RFLAQVEKREAGDDEAQMYDEDFVQALEYGMPPAGGLGIGIDRLVMLLTNSSSIRDVILF 502

Query: 346 PFSQSN 351
           P  +  
Sbjct: 503 PLMRPR 508


>gi|302388757|ref|YP_003824578.1| lysyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199385|gb|ADL06955.1| lysyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 490

 Score =  362 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 171/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y     FIE+++ 
Sbjct: 136 LRPLPEKWHGLKDVDTRYRQRYLDLIVNPDVRRTFVTRSKIIRAIRNYLDSRGFIEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 196 VLTPLAGGAA-ARPFITH---HNALDIDLYLRIATELYLKRLIVGGFEKVYEIGKDFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  Y+ +M+   ++I   A+ V       +Q    +      
Sbjct: 252 GISIKHNPEFTMIELYQAYADYQDMMELTEDMISHVAKEVLGTTKVVYQGEEIDLTPPWT 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +YA +D        +          A++ G+ V  +DT   + + I  EK+
Sbjct: 312 RMTMVEAVKKYAGVDFN------ELKTDEEARAVARKLGLEVGDNDTRGKVLNTIFEEKV 365

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     +P FT RFEL+    E  NA  EL DPI+QR 
Sbjct: 366 EEH--LVQPTFILDYPIEISPLAKRKEDNPDFTYRFELFITRRETANAFSELNDPIDQRE 423

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E++    E +  DEDF+  L   MP + G+ +G DRLVML+T + +I +VI  
Sbjct: 424 RFLQQLKEREAGDEEAHAFDEDFINALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVILF 483

Query: 346 PFSQSN 351
           P  +  
Sbjct: 484 PTMRPK 489


>gi|220930923|ref|YP_002507831.1| Lysyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992233|gb|ACL68836.1| Lysyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 491

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 171/367 (46%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I   +R+Y  +  F+E+++ 
Sbjct: 137 LRPLPEKWHGLRDKELRYRQRYLDLIVNPEVRKTFITRSKIIREIRKYLEDKGFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G   + R F T     + +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 197 MMHPIAGGA-NARPFITH---HNALDIDLYLRIAPELYLKRLIVGGFERVFEINRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y+A   Y  +M    ++I   A+ V      S+Q    +      
Sbjct: 253 GMSYKHNPEFTMLELYQAQADYHDMMDLTEDLIYNVAKKVLGTTKISYQGQEIDLTPPWN 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA   +  +D        +          A+  GI +    +   + + I  EK+
Sbjct: 313 RVTMVEAVKEHTGVDFN------EIKSDEEARKAAEGLGIELEGKPSRGKVLNEIFEEKV 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P FT RFE +  + E+ NA  EL +PI+QR 
Sbjct: 367 EDK--LVQPTFIMDYPIEVSPLAKRKDDNPDFTYRFEAFINSWEIANAFSELNNPIDQRE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++++++ +  +E   +DED++  L   MP + G+ +G DRL+M++T + +I +VI  
Sbjct: 425 RFEEQVKQRAQGDDEAQMMDEDYVRALEYGMPPTGGLGIGIDRLIMVLTDSPSIRDVILF 484

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 485 PTMRPEK 491


>gi|312134580|ref|YP_004001918.1| lysyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774631|gb|ADQ04118.1| lysyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 495

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 173/366 (47%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR++I  S+R++  +  F+E+++ 
Sbjct: 141 LRPLPEKWHGLKDVDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 201 VLSPIAGGAA-ARPFITH---HNALDIDLYLRIATELHLKRLIVGGFDKVYELGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     +I   A+ V      ++Q    +     +
Sbjct: 257 GISIKHNPEFTTIEVYQAYADYKDMMDLTEELITTVAQEVLGTLKITYQGQEIDLTPPWQ 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y  +D        +          A+  GI V  +     I + +  +K+
Sbjct: 317 RLTMVEAIKKYVGVD------FENISSLDEAKKIAKDIGIEVEENWQVGHIINEVFEKKV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P+FT+RFEL+    E+ NA  EL DP +Q+ 
Sbjct: 371 ED--FLIQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANAFSELNDPFDQKE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E+++   E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 429 RFLEQLKERQRGNQEAHMMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PTMRPK 494


>gi|222528674|ref|YP_002572556.1| lysyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455521|gb|ACM59783.1| lysyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 497

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 174/366 (47%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR++I  S+R++  +  F+E+++ 
Sbjct: 143 LRPLPEKWHGLKDVDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 203 VLSPVAGGAA-ARPFITH---HNALDIDLYLRIATELHLKRLIVGGFDKVYELGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     +I   A+ V      ++Q    +  +  +
Sbjct: 259 GISIKHNPEFTTIEIYQAYADYKDMMDLTEKLITTVAQEVLGTLKITYQGQEIDLTAPWQ 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y  +D        +          A+  GI V  +     I + I  +K+
Sbjct: 319 RLTMVEAIKKYVGVD------FENVTSLDEARKIAKDLGIEVEENWQIGHIINEIFEKKV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P+FT+RFEL+    E+ NA  EL DP +Q+ 
Sbjct: 373 ED--FLVQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANAFSELNDPFDQKE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E+++   E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 431 RFLEQLKERQRGNQEAHMMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLF 490

Query: 346 PFSQSN 351
           P  +  
Sbjct: 491 PTMRPK 496


>gi|312793712|ref|YP_004026635.1| lysyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180852|gb|ADQ41022.1| lysyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 497

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 174/366 (47%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR++I  S+R++  +  F+E+++ 
Sbjct: 143 LRPLPEKWHGLKDVDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 203 VLSPIAGGAA-ARPFITH---HNALDIDLYLRIATELHLKRLIVGGFDKVYELGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M+    +I   A+ V      ++Q    +     +
Sbjct: 259 GISIKHNPEFTTIEIYQAYADYKDMMELTEKLITTVAQEVLGTLKITYQGQEIDLTPPWQ 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y  +D        +          A+  GI V  +     I + +  +K+
Sbjct: 319 RLTMVEAIKKYVGVD------FENVTSLDEARKIAKDLGIEVEENWQVGHIINEVFEKKV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P+FT+RFEL+    E+ NA  EL DP +Q+ 
Sbjct: 373 ED--FLVQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANAFSELNDPFDQKE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E+++   E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 431 RFLEQLKERQRGNQEAHMMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLF 490

Query: 346 PFSQSN 351
           P  +  
Sbjct: 491 PTMRPK 496


>gi|312623017|ref|YP_004024630.1| lysyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203484|gb|ADQ46811.1| lysyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 497

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 173/366 (47%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR++I  S+R++  +  F+E+++ 
Sbjct: 143 LRPLPEKWHGLKDVDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 203 VLSPVAGGAA-ARPFITH---HNALDIDLYLRIATELHLKRLIVGGFDKVYELGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     +I   A+ V      ++Q    +     +
Sbjct: 259 GISIKHNPEFTTIEIYQAYADYKDMMDLTEKLITTVAQEVLGTLKITYQGQEIDLTPPWQ 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y  +D        +          A+  GI V  +     I + I  +K+
Sbjct: 319 RLTMVEAINKYVGVD------FENVTSLDEARKIAKDLGIEVEENWQIGHIINEIFEKKV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P+FT+RFEL+    E+ NA  EL DP +Q+ 
Sbjct: 373 ED--FLVQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANAFSELNDPFDQKE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E+++   E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 431 RFLEQLKERQRGNQEAHMMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLF 490

Query: 346 PFSQSN 351
           P  +  
Sbjct: 491 PTMRPK 496


>gi|312128201|ref|YP_003993075.1| lysyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778220|gb|ADQ07706.1| lysyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 497

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 173/366 (47%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    RD    YR+R              +KR++I  S+R++  +  F+E+++ 
Sbjct: 143 LRPLPEKWHGLRDIDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 203 VLSPVAGGAA-ARPFITH---HNALDIDLYLRIATELHLKRLIVGGFDKVYELGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     +I   A+ V      ++Q    +     +
Sbjct: 259 GISIKHNPEFTTIEIYQAYADYKDMMNLTEELITTVAKEVLGTLKITYQGQEIDLTPPWQ 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y  +D        +          A+  GI V  +     I + I  +K+
Sbjct: 319 RLTMVEAIKKYVGVD------FENVNSIDEARKIAKDLGIEVEENWQVGHIINEIFEKKV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P+FT+RFEL+    EL NA  EL DP +Q+ 
Sbjct: 373 ED--FLVQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCRELANAFSELNDPFDQKE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E+++   E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 431 RFLEQLKERQRGNQEAHMMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLF 490

Query: 346 PFSQSN 351
           P  +  
Sbjct: 491 PTMRPK 496


>gi|134298053|ref|YP_001111549.1| lysyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134050753|gb|ABO48724.1| lysyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 510

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 167/367 (45%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ +   +R Y  +  F+E+++ 
Sbjct: 155 LRPLPEKWHGLKDVDLRYRQRYVDLIVNPEVKQTFITRSRVVRGIRNYLDQRGFLEVETP 214

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ +PE   K+LL  G +K++     +RN 
Sbjct: 215 MMHPIAGGAS-ARPFITH---HNTLDMNLYMRIAPELYLKRLLVGGFDKVYEINRNFRNE 270

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M    ++I   A+ V    +  ++ V  +      
Sbjct: 271 GISTRHNPEFTTIELYQAYADYNDMMDLTEDLISQVAQDVLGTTMVEYEGVEISLAKPWR 330

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + E    ++ +D           D    +  A+  G+ V    +W DI + +  EK+
Sbjct: 331 RVPMLEIVKEHSGLDFSQ------LKDAKEAFEAAKGLGLDVEPSASWGDILNTVFEEKV 384

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFEL+    EL NA  EL DPI+Q+ 
Sbjct: 385 EDK--LIQPTFVIDYPVDISPLAKRQQENPELTYRFELFIYGRELANAFSELNDPIDQKG 442

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++++     E    DEDF+  L   MP + G+ +G DRLVML+T +++I +VI  
Sbjct: 443 RFMSQVEKRNAGDEEAQMYDEDFIQALEYGMPPAGGLGIGIDRLVMLLTNSSSIRDVILF 502

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 503 PLMRPKE 509


>gi|326391795|ref|ZP_08213313.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992153|gb|EGD50627.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 547

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 163/368 (44%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              LKR  I  ++RE+     F+E+++ 
Sbjct: 192 LQILPEKWHGLKDPDLRYRQRYTDLIINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETP 251

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 252 ILHTIAGGAA-ARPFITH---HNALDIDMYLRIALELHLKRLIVGGLEKVYEMGRVFRNE 307

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y A+  Y  +M+    +    A+         +Q    +     +
Sbjct: 308 GMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQGTEIDLTPPWK 367

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   Y  +D      + +          A++  +         ++ + +  E +
Sbjct: 368 RITMVDAIKEYVGVDFNEVKTDAE------AVEIAKRLNLETKEGMQKGEVIALVFDELV 421

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     +P FT RFE +    E+ NA  EL DPI+Q+ 
Sbjct: 422 EQH--LIQPTFVMDYPVEISPLAKRKHDNPAFTSRFEAFIYGREVANAFSELNDPIDQKE 479

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++++    E + +DEDF+  L   MP + G+ +G DRLVM +T A +I +VI  
Sbjct: 480 RFLEQLKQREAGDEEAHMMDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILF 539

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 540 PTMKPRND 547


>gi|188587577|ref|YP_001919618.1| lysyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|188497858|gb|ACD50994.1| lysyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 501

 Score =  357 bits (916), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 165/370 (44%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I S +RE+     F+E+++ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQREVDIITNPEVKETFIKRSKIISGIREFLDNRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+ AG EK++     +RN 
Sbjct: 204 ILSPIAGGAA-AKPFITH---HNTLDMDMYLRIATELYLKRLIVAGFEKVYEIGRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN-VNCNPFSEPE 166
                H PEFT++E Y A+  Y  +M+   N++    E  N            +      
Sbjct: 260 GMSVRHNPEFTVIELYEAYSDYNDMMEITENMVAYVCEKVNGTTKVMYEGTEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD---DTWSDIFSRILI 223
            IT+ +    YA +D      N +          A++  +  A      T  ++ + +  
Sbjct: 320 RITMVDVVKEYAGVDFNEVKTNEE------AQAIAKEKHLEFAKPLNTITKGEVLNSLYE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E N+     T +  YP   S L      +P  T+RFE +    E+CNA  EL DPI 
Sbjct: 374 EFGEANM--IQPTFVTDYPVEVSPLTKKKRGNPELTERFEGFVFGREICNAYSELNDPIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE++ ++++   +E Y +DE F++ L   MP + G+ +G DRL+M +T + +I +V
Sbjct: 432 QRQRFEQQEKDRELGDDEAYMMDEQFMSALETGMPPTGGLGIGIDRLIMFLTDSTSIRDV 491

Query: 343 IWTPFSQSNQ 352
           +  P  +  +
Sbjct: 492 LLFPTMRPQK 501


>gi|312877912|ref|ZP_07737856.1| lysyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795304|gb|EFR11689.1| lysyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 497

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 175/366 (47%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    RD    YR+R              +KR++I  S+R++  +  F+E+++ 
Sbjct: 143 LRPLPEKWHGLRDIDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 203 VLSPVAGGAA-ARPFITH---HNALDIDLYLRIATELHLKRLIVGGFDKVYELGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+++M+    +I   A+ V      ++Q    +     +
Sbjct: 259 GISIKHNPEFTTIEIYQAYADYKEMMELTEKLITTVAQEVLGTLKITYQRQEIDLTPPWQ 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y  +D        +          A+  GI V  +     I + +  +K+
Sbjct: 319 RLTMVEAIKKYVGVD------FENVTSLDEARKIAKDLGIEVEENWQVGHIINEVFEKKV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P+FT+RFEL+    E+ NA  EL DP +Q+ 
Sbjct: 373 ED--FLVQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANAFSELNDPFDQKE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E+++   E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 431 RFLEQLKERQRGNQEAHMMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLF 490

Query: 346 PFSQSN 351
           P  +  
Sbjct: 491 PTMRPK 496


>gi|302871283|ref|YP_003839919.1| lysyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574142|gb|ADL41933.1| lysyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 495

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 172/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    RD    YR+R              +KR++I  S+R++  +  F+E+++ 
Sbjct: 141 LRPLPEKWHGLRDVDTRYRKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 201 VLSPIAGGAA-ARPFITH---HNALDIDLYLRIATELHLKRLIVGGFDKVYELGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     +I   A+        ++Q    +     +
Sbjct: 257 GISIKHNPEFTTIEIYQAYADYKDMMDLTEELITTVAQEVLSTLKITYQGQEIDLTPPWQ 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y  +D        +          A+  GI V  +     I + +  +K+
Sbjct: 317 RLTMVEAIKKYVGVD------FENVSSLDEARKIAKDLGIEVEENWQVGHIINEVFEKKV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P+FT+RFEL+    E+ NA  EL DP +Q+ 
Sbjct: 371 ED--FLIQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANAFSELNDPFDQKE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E+++   E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 429 RFLEQLKERQRGNQEAHMMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PTMRPK 494


>gi|289579208|ref|YP_003477835.1| lysyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528921|gb|ADD03273.1| lysyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 499

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 163/368 (44%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              LKR  I  ++RE+  +  F+E+++ 
Sbjct: 144 LQILPEKWHGLKDPDLRYRQRYTDLIINPEVKEIFLKRTKIIKAIREFLDDRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILHTIAGGAA-ARPFITH---HNALDIDMYLRIALELHLKRLIVGGLEKVYEMGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y A+  Y  +M+    +    A+         +Q    +     +
Sbjct: 260 GMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQGTEIDLTPPWK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   Y  +D        +          A++  +         ++ + +  E +
Sbjct: 320 RITMVDAIKEYVGVDFN------EVKTDEEAIEIAKKLNLETKEGMKKGEVIALVFDELV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     +P FT RFE +    E+ NA  EL DPI+Q+ 
Sbjct: 374 EQH--LIQPTFVMDYPVEISPLAKRKHDNPEFTSRFEAFIYGREVANAFSELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++++    E + +DEDF+  L   MP + G+ +G DRLVM +T A +I +VI  
Sbjct: 432 RFLEQLKQREAGDEEAHMMDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILF 491

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 492 PTMKPKND 499


>gi|332798251|ref|YP_004459750.1| Lysyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332695986|gb|AEE90443.1| Lysyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 493

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 173/368 (47%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              L R+ I S++R++  +  F+E+++ 
Sbjct: 138 LRPLPEKWHGLKDTDIRYRQRYLDLIVNPEVKQTFLTRSKIISAMRQFLDDKGFVEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 198 VLSPIAGGAA-ARPFVT---YHNALDMQLYLRIATELYLKRLIVGGFEKVYELGKDFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  Y+ +MK   ++I   A +V      ++Q    +      
Sbjct: 254 GISIKHNPEFTMVELYQAYADYKDMMKLAEDMIAYIAEKVLGTTKITYQGEEIDLTPPWT 313

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
            +T+ EA   +  ID  +   + +          A++  I    D DT   + + I  EK
Sbjct: 314 RMTMVEAVKHFTGIDFDSIASDEE------ARKVARELHIEEIKDCDTKGKVLNLIFEEK 367

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E N  +   T +  YP   S LA     +P  T RFE +    E+ NA  EL DPI+QR
Sbjct: 368 VEQN--LVQPTFIYDYPIEISPLAKKKEDNPDLTYRFEAFVTGREIANAFSELNDPIDQR 425

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF ++++E++    E +  DED++  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 426 ERFLQQLKEREAGDEEAHAFDEDYINALEYGMPPTGGMGIGVDRLVMLLTDSYSIRDVIL 485

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 486 FPTMRPKQ 493


>gi|251780464|ref|ZP_04823384.1| lysine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243084779|gb|EES50669.1| lysine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 501

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 165/370 (44%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I S +RE+     F+E+++ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQREVDIITNPEVKETFIKRSKIISGIREFLDNKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+ AG EK++     +RN 
Sbjct: 204 ILSPIAGGAA-AKPFITH---HNTLDMDMYLRIATELYLKRLIVAGFEKVYEIGRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN-VNCNPFSEPE 166
                H PEFT++E Y A+  Y  +M+   N++    E  N            +      
Sbjct: 260 GMSVRHNPEFTVIELYEAYSDYNDMMEITENMVAYVCEKVNGTTKVMYEGTEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD---DTWSDIFSRILI 223
            IT+ +    YA +D      N +          A++  +  A      T  ++ + +  
Sbjct: 320 RITMVDVVKEYAGVDFNEVKTNEE------AQAIAKEKHLEFAKPLNTITKGEVLNSLYE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E N+     T +  YP   S L      +P  T+RFE +    E+CNA  EL DPI 
Sbjct: 374 EFGEANM--IQPTFVTDYPVEVSPLTKKKRGNPELTERFEGFVFGREICNAYSELNDPIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE++ ++++   +E Y +DE F++ L   MP + G+ +G DRL+M +T + +I +V
Sbjct: 432 QRQRFEQQEKDRELGDDEAYMMDEQFMSALETGMPPTGGLGIGIDRLIMFLTDSTSIRDV 491

Query: 343 IWTPFSQSNQ 352
           +  P  +  +
Sbjct: 492 LLFPTMRPQK 501


>gi|239825660|ref|YP_002948284.1| lysyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239805953|gb|ACS23018.1| lysyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 494

 Score =  357 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y   + ++E+++ 
Sbjct: 141 LRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKNTFITRSRIIQAMRRYLDSHGYLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +  PLY++ + E   K+L+  G EK++     +RN 
Sbjct: 201 MMHSIAGGAA-ARPFITH---HNALDMPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +MK   N+I   A+ V       +     +   E +
Sbjct: 257 GISTRHNPEFTMLELYEAYADFRDIMKLTENLIAHIAQEVLGTTKIQYGEHTVDLTPEWK 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   Y  +D    + +            A++ G+ +A   T+  I +    +K+
Sbjct: 317 RLHMVDAIKEYVGVDFWKQMSD------EEARELAKEHGVEIAPHMTFGHIVNEFFEQKV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 371 EDK--LIQPTFIYGHPVEISPLAKKNPDDPRFTDRFELFIVGREHANAFTELNDPIDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 429 RFEAQLKEREQGNDEAHEMDEDFIEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLF 488

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 489 PQMRNK 494


>gi|311070729|ref|YP_003975652.1| lysyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310871246|gb|ADP34721.1| lysyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 499

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 102/364 (28%), Positives = 174/364 (47%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y  ++ ++E+++ 
Sbjct: 146 LRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKNTFIARSKIIQAMRRYLDDHGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++   PG  +  R F T     + +  PLY++ + E   K+L+  G EK++     +RN 
Sbjct: 206 TMHSIPGGAS-ARPFITH---HNALDMPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N+I   A+ V       +     +   E +
Sbjct: 262 GVSTRHNPEFTMIELYEAYADYQDIMSLTENLIAHIAQEVLGSTTIQYGEEQIDLKPEWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +      D       A++ G+ +    T   I +    +KI
Sbjct: 322 RLHMVDAVKEATGVDFWNEVTVEQARD------YAKEHGVEITKSMTVGHIINEFFEQKI 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EET--LIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +DEDF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 493

Query: 346 PFSQ 349
           P  +
Sbjct: 494 PQMR 497


>gi|147676598|ref|YP_001210813.1| lysyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|259511529|sp|A5D5Q4|SYK_PELTS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146272695|dbj|BAF58444.1| lysyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 506

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 104/367 (28%), Positives = 167/367 (45%), Gaps = 25/367 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    RD    YR+R                R+ I  + R +     F+E+++ 
Sbjct: 150 LRPLPEKWHGLRDVELRYRQRYVDLIVNPEVKEVFETRSKIIRACRNFLDGKGFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   LYL+ +PE   K+LL  G EK++     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDMDLYLRIAPELYLKRLLVGGFEKVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y+A+  Y  +M     +I   A E        +Q    +      
Sbjct: 266 GISTKHNPEFTMLELYQAYADYTDMMNLTEELISAVAVEALGTTKIEYQGTEIDLAPPWP 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + E    +A +D G         +     ++    G+ +   D+W  I +++  E +
Sbjct: 326 RIPMLETIKVHAGLDFGAL----KSAEEAFKAVEQAGIGLELDPSDSWGTIVNKVFEEVV 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  YP   S LA     DP  T RFEL+    E+ NA  EL DPI+Q+ 
Sbjct: 382 EPK--LIQPTFVVDYPVEISPLAKRKAEDPELTYRFELFIYGREIANAFSELNDPIDQKG 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++++K    E + +DED++  L   MP + G+ +G DRLVML+T + +I +VI  
Sbjct: 440 RFLKQVEKRKAGDEEAHMMDEDYINALEYGMPPAGGLGIGIDRLVMLLTNSASIRDVILF 499

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 500 PLMKPRE 506


>gi|78044571|ref|YP_361162.1| lysyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123756728|sp|Q3A9M2|SYK_CARHZ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|77996686|gb|ABB15585.1| lysyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 488

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 168/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I  ++RE+  +  F+E+++ 
Sbjct: 134 LRPLPEKWHGLTDVELRYRQRYVDLIVNPEVRETFILRSRIVKTIREFLDQKGFLEVETP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LYL+ +PE   K+LL  G EK++     +RN 
Sbjct: 194 MMHPIAGGAA-ARPFITH---HNALDMKLYLRIAPELYLKRLLVGGFEKVYEINRNFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y+A+  Y  +M     +I   A +V      ++Q    N     +
Sbjct: 250 GISTKHNPEFTMLELYQAYADYHDMMDITEELITHVAEKVLGTLEITYQGTPINLHRPWK 309

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D           D    Y +A++ G+ V     W +I + +  EK+
Sbjct: 310 RIPMLKAIEEATGVDFAGV------KDPVQAYAKAKELGVPVEEGMGWGEIITAVFEEKV 363

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  YP   S LA     +P  T RFEL+    E+ NA  EL DPI+Q+ 
Sbjct: 364 EPT--LINPTFVIDYPVEVSPLAKRQKENPDLTYRFELFIYGREMANAFSELNDPIDQKE 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++ + K   E + +DED++  L   MP + G+ +G DRLVML+T   +I +VI  
Sbjct: 422 RFLKQLEARAKGNEEAHMMDEDYITALEYGMPPAGGLGIGIDRLVMLLTDQASIRDVILF 481

Query: 346 PFSQSN 351
           P  +  
Sbjct: 482 PLMRPR 487


>gi|168206860|ref|ZP_02632865.1| lysyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168211213|ref|ZP_02636838.1| lysyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170661760|gb|EDT14443.1| lysyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170710776|gb|EDT22958.1| lysyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 647

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 165/369 (44%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I  ++RE+     F+E+D+ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+ AG EK++     +RN 
Sbjct: 204 ILSPIAGGAA-ARPFITH---HNALDIDMYLRIATELYLKRLIVAGFEKVYEMGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N+I    E        +++    +      
Sbjct: 260 GVSVRHNPEFTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD---DTWSDIFSRILI 223
            IT+ +A   +A ID        +          A++  +         T  ++ + +  
Sbjct: 320 RITMVDAVKEFAGIDFN------EIKSDEEAQAIAKEKNLEFPKPLDKVTKGEVLNMLFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T L  YP   S L      +  FT+RFE +    E+CNA  EL DPI 
Sbjct: 374 EYGEDK--LIQPTFLIDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCNAYSELNDPIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE++ +E++   +E Y +DE+F++ L   MP + G+ +G DR++M +T +++I +V
Sbjct: 432 QRERFEQQAREREYGDDEAYMLDEEFMSALETGMPPTGGLGIGIDRMIMFLTDSSSIRDV 491

Query: 343 IWTPFSQSN 351
           I  P  +  
Sbjct: 492 ILFPTMKPQ 500


>gi|297545388|ref|YP_003677690.1| lysyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843163|gb|ADH61679.1| lysyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 499

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 163/368 (44%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              LKR  I  ++RE+  +  F+E+++ 
Sbjct: 144 LQILPEKWHGLKDPDLRYRQRYTDLIINPEVKEVFLKRTKIIKAIREFLDDRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILHTIAGGAA-ARPFITH---HNALDIDMYLRIALELHLKRLIVGGLEKVYEMGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y A+  Y  +M+    +    A+         +Q    +     +
Sbjct: 260 GMDVRHNPEFTLLELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQGTEIDLTPPWK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   Y  +D        +          A++  +         ++ + +  E +
Sbjct: 320 RITMVDAIKEYVGVDFN------EVKTDEEAIEIAKKLNLEAKEGMKKGEVIALVFDELV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     +P FT RFE +    E+ NA  EL DPI+Q+ 
Sbjct: 374 EQH--LIQPTFVMDYPVEISPLAKRKHDNPEFTSRFEAFIYGREVANAFSELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++++    E + +DEDF+  L   MP + G+ +G DRLVM +T A +I +VI  
Sbjct: 432 RFLEQLKQREAGDEEAHMMDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILF 491

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 492 PTMKPKND 499


>gi|182626013|ref|ZP_02953776.1| lysyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177908720|gb|EDT71231.1| lysyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 647

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 165/369 (44%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I  ++RE+     F+E+D+ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+ AG EK++     +RN 
Sbjct: 204 ILSPIAGGAA-ARPFITH---HNALDIDMYLRIATELYLKRLIVAGFEKVYEMGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N+I    E        +++    +      
Sbjct: 260 GVSVRHNPEFTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD---DTWSDIFSRILI 223
            IT+ +A   +A ID        +          A++  +         T  ++ + +  
Sbjct: 320 RITMVDAVKEFAGIDFN------EIKSDEEAQAIAKEKNLEFPKPLDKVTKGEVLNMLFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T L  YP   S L      +  FT+RFE +    E+CNA  EL DPI 
Sbjct: 374 EYGEDK--LIQPTFLIDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCNAYSELNDPIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE++ +E++   +E Y +DE+F++ L   MP + G+ +G DR++M +T +++I +V
Sbjct: 432 QRERFEQQAREREYGDDEAYMLDEEFMSALETGMPPTGGLGIGIDRMIMFLTDSSSIRDV 491

Query: 343 IWTPFSQSN 351
           I  P  +  
Sbjct: 492 ILFPTMKPQ 500


>gi|296131772|ref|YP_003639019.1| lysyl-tRNA synthetase [Thermincola sp. JR]
 gi|296030350|gb|ADG81118.1| lysyl-tRNA synthetase [Thermincola potens JR]
          Length = 489

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 168/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y  +  F+E+++ 
Sbjct: 135 LRPLPEKWHGLKDVELRYRQRYIDLIVNPEVKEVFVTRSKIIRAIRNYLDKLGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  R F T     + +   LYL+ +PE   K+L+  G EK++     +RN 
Sbjct: 195 MMHPIAGGAT-ARPFITH---HNALDMDLYLRIAPELYLKRLIVGGLEKVYEINRNFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  YE +M    N++   A+ V       +Q    +  +   
Sbjct: 251 GISTKHNPEFTMLELYEAYADYEDMMVLTENLVSTVAKEVLGTDKIVYQGTEIDLAAPWR 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + EA      +D      + +          AQ+ GI++    +   + + +    +
Sbjct: 311 RVPMLEAIKEETGVDFSVINTDAE------AIEAAQKLGIKLEEGVSKGTVINEVFETFV 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  YP   S LA     +P +T RFE +  + E  NA  EL DPI+Q  
Sbjct: 365 EPK--LVQPTFVIDYPIEISPLAKRKKDNPAYTYRFEAFIYSRETANAFSELNDPIDQEE 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++++ K  +E + +DED++  L   +P + G+ +G DRLVML+T + +I +V+  
Sbjct: 423 RFRKQVEKRAKGDDEAHMMDEDYINALQIGLPPTGGLGIGIDRLVMLLTDSASIRDVLLF 482

Query: 346 PFSQSN 351
           P  +  
Sbjct: 483 PLMRPR 488


>gi|297616356|ref|YP_003701515.1| lysyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144193|gb|ADI00950.1| lysyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 487

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 105/367 (28%), Positives = 178/367 (48%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +    +D    YR+R              +KR+ I   +R Y  E  F+E+++ 
Sbjct: 133 LNPLPEKWHGLKDVELRYRQRYVDLIVNPPVREVFVKRSQIIREMRRYLDERGFLEVETP 192

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   LYL+ +PE   K+LL  G EK++     +RN 
Sbjct: 193 MMQPIPGGAA-ARPFITH---HNALGIDLYLRIAPELYLKRLLVGGFEKVYEINRNFRNE 248

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPE 166
                H PEFTMLE Y+A+  ++ +M+   ++I    +     +   +Q    +     +
Sbjct: 249 GISTKHNPEFTMLELYQAYADFQDMMRLTEDLISSVVKSVFGTMVVEYQGSRLDFTPPWQ 308

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + EA  +YA +D        D          A+  G+ V  + T  ++ + +  E +
Sbjct: 309 RLPMLEAVKKYAGVD------FTDLKSDEEAQEAARSLGLEVEAEATRGEVINLVFEEFV 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP+  +     +  +P   S LA     +P FT RFE++  N E+ NA  EL DPI+QR 
Sbjct: 363 EPH--LVQPVFVYGHPVDVSPLAKRNRENPEFTDRFEVFIMNREIANAFSELNDPIDQRS 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFEK++ +++K   E + +DED++  L   MP + G+ +G DRLVML+T + +I +VI  
Sbjct: 421 RFEKQVAKREKGDTEAHMMDEDYINALEYGMPPAGGLGIGIDRLVMLLTDSPSIRDVILF 480

Query: 346 PFSQSNQ 352
           P  +  Q
Sbjct: 481 PTLRPTQ 487


>gi|146295866|ref|YP_001179637.1| lysyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145409442|gb|ABP66446.1| lysyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 495

 Score =  355 bits (910), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 172/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    RD    YR+R              +KR+++  S+R+Y  +  F+E+++ 
Sbjct: 141 LRPLPEKWHGLRDVDTRYRKRYLDLIVNHQVRDTFIKRSLMIRSIRKYLDDRGFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 201 VLSPIAGGAA-ARPFITH---HNALDIDLYLRIATELHLKRLIVGGFDKVYELGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     +I   A+ V      ++Q    +     +
Sbjct: 257 GISIKHNPEFTTIEIYQAYADYKDMMNLTEELITTVAKEVLGTLKITYQGQEIDLTPPWQ 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y  +D                   A+  GI V  +     I + +  +K+
Sbjct: 317 RLTMIDAIKKYVGVDFSQVSS------LDEARKIAKDLGIEVEENWQVGHIINEVFEQKV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P+FT+RFEL+    E+ NA  EL DP +Q+ 
Sbjct: 371 ED--FLVQPTFIMDYPVEVSPLAKRKKDNPQFTERFELFITCREIANAFSELNDPFDQKE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E+++   E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 429 RFLEQLKERQRGNQEAHMMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PTMRPK 494


>gi|296329584|ref|ZP_06872070.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672781|ref|YP_003864452.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296153327|gb|EFG94190.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305411024|gb|ADM36142.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 499

 Score =  355 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 102/364 (28%), Positives = 173/364 (47%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y  ++ ++E+++ 
Sbjct: 146 LRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFIARSKIIQAMRRYLDDHGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++   PG  +  R F T     + +  PLY++ + E   K+L+  G EK++     +RN 
Sbjct: 206 TMHSIPGGAS-ARPFITH---HNALDIPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N++   A+ V       +     +   E +
Sbjct: 262 GVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQIDLKPEWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D        ++         A++ GI +    T   I +    +KI
Sbjct: 322 RIHMVDAVKEATGVDFW------EEVTVEQAREYAKEHGIEIKDSMTVGHIINEFFEQKI 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EET--LIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E++   +E + +DEDF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEAQLKEREAGNDEAHLMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 493

Query: 346 PFSQ 349
           P  +
Sbjct: 494 PQMR 497


>gi|321313752|ref|YP_004206039.1| lysyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|291482454|dbj|BAI83529.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
 gi|320020026|gb|ADV95012.1| lysyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 499

 Score =  355 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 173/364 (47%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y  ++ ++E+++ 
Sbjct: 146 LRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYLDDHGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++   PG  +  R F T     + +  PLY++ + E   K+L+  G EK++     +RN 
Sbjct: 206 TMHSIPGGAS-ARPFITH---HNALDIPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N++   A+ V       +     +   E +
Sbjct: 262 GVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQIDLKPEWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D        ++         A++ G+ +    T   I +    +KI
Sbjct: 322 RIHMVDAVKEATGVDFW------EEVTVEQAREYAKEHGVEIKDSMTVGHIINEFFEQKI 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EET--LIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E++   +E + +DEDF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEAQLKEREAGNDEAHLMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 493

Query: 346 PFSQ 349
           P  +
Sbjct: 494 PQMR 497


>gi|256751868|ref|ZP_05492740.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749275|gb|EEU62307.1| lysyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 499

 Score =  354 bits (909), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 162/368 (44%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              LKR  I  ++RE+     F+E+++ 
Sbjct: 144 LQILPEKWHGLKDPDLRYRQRYTDLIINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILHTIAGGAA-ARPFITH---HNALDIDMYLRIALELHLKRLIVGGLEKVYEMGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y A+  Y  +M+    +    A+         +Q    +     +
Sbjct: 260 GMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQGTEIDLTPPWK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   Y  +D        +          A++  +         ++ + +  E +
Sbjct: 320 RITMVDAIKEYVGVDFN------EVKTDEEAIEIAKKLNLETKEGMKKGEVIALVFDELV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     +P FT RFE +    E+ NA  EL DPI+Q+ 
Sbjct: 374 EQH--LIQPTFVMDYPVEISPLAKRKHDNPAFTSRFEAFIYGREVANAFSELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++++    E + +DEDF+  L   MP + G+ +G DRLVM +T A +I +VI  
Sbjct: 432 RFLEQLKQREAGDEEAHMMDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILF 491

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 492 PTMKPKND 499


>gi|167036745|ref|YP_001664323.1| lysyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115168|ref|YP_004185327.1| lysyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|238687706|sp|B0KCE4|SYK_THEP3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166855579|gb|ABY93987.1| lysyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928259|gb|ADV78944.1| lysyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 499

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 163/368 (44%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              LKR  I  ++RE+     F+E+++ 
Sbjct: 144 LQILPEKWHGLKDPDLRYRQRYTDLIINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILHTIAGGAA-ARPFITH---HNALDIDMYLRIALELHLKRLIVGGLEKVYEMGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y A+  Y  +M+    +    A+  N      +Q    +     +
Sbjct: 260 GMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAYVAQKVNGITKIVYQGTEIDLTPPWK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   Y  +D        +          A++  +         ++ + +  E +
Sbjct: 320 RITMVDAIKEYVGVDFN------EVKTDEEAIEIAKKLNLETKEGMKKGEVIALVFDELV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     +P FT RFE +    E+ NA  EL DPI+Q+ 
Sbjct: 374 EQH--LIQPTFVMDYPVEISPLAKRKHDNPAFTSRFEAFIYGREVANAFSELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++++    E + +DEDF+  L   MP + G+ +G DRLVM +T A +I +VI  
Sbjct: 432 RFLEQLKQREAGDEEAHMMDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILF 491

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 492 PTMKPKND 499


>gi|218245720|ref|YP_002371091.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|218166198|gb|ACK64935.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 573

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 106/367 (28%), Positives = 165/367 (44%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +S+R Y  EN FIEI++ 
Sbjct: 156 LLPLPDKWHGLTDTEKRYRQRYVDLIVNPQVRQTFRRRAQITASIRRYLDENGFIEIETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 216 VLQSEAGGA-EARPFIT---YHNTLDMELYLRIATELHLKRLIIGGFEKVFELGRIFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M+    +I  AA+        ++Q    +  +   
Sbjct: 272 GVSTKHNPEFTSIEVYQAYADYFDMMELTEALITNAAQTVLGTLKLTYQETEIDLSTPWR 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            +T+ +       +D  +        D       A++AGI V  D      + +    +K
Sbjct: 332 RVTMTDIVKEKTGLDFDSF------TDFESAKEAAKKAGIDVPDDCPSLGKLMNEAFEQK 385

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA  + +     +RFELY    EL N+  EL DPI+QR
Sbjct: 386 VEET--LIQPTFILDFPVEISPLAKPHRSKKGLVERFELYIVGRELANSFSELTDPIDQR 443

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R EK+ ++K     E   +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 444 ERLEKQAEQKAAGDLEAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 503

Query: 345 TPFSQSN 351
            P  +S 
Sbjct: 504 FPLLKSQ 510


>gi|15612661|ref|NP_240964.1| lysyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|11387139|sp|Q9KGG4|SYK_BACHD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|10172710|dbj|BAB03817.1| lysyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 501

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 171/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y  +  ++E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEQRYRQRYLDLIVNPEVRDTFVLRSKILQSMRRYLDDRGYLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++   PG  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 TMHSIPGGAS-ARPFVTH---HNALDMTLYMRIAIELHLKRLIVGGMEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M+    +I   A +V      ++     N   +  
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYNDIMELTELLIAHIAKDVLGTTTITYGEHEVNLEPKWR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + EA      +D    + + +          A++  + V    T+  + +      +
Sbjct: 318 RVHMVEAIKEETGVDFWNEMSDEE------ARALAKEHNVPVKETMTYGHVVNEFFEHFV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QRH
Sbjct: 372 EEK--LIQPTFVYGHPVAISPLAKKNPDDPRFTDRFELFIVGREHANAFSELNDPIDQRH 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE+++ E+++  +E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEQQLVEREQGDDEAHMMDEDFVESLEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 489

Query: 346 PFSQSN 351
           P  +  
Sbjct: 490 PQMRHK 495


>gi|315644404|ref|ZP_07897544.1| lysyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315280281|gb|EFU43573.1| lysyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 503

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 177/367 (48%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +    +D    YR+R              + R+ I  S+R Y     ++E+++ 
Sbjct: 149 LYPLPEKFHGLKDVELRYRQRYVDLIINPDVQKTFITRSRIIQSMRRYLDSLGYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 209 TLHSIAGGAA-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVYRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N+I   A+ V   ++ S+Q    +   +  
Sbjct: 265 GISTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTQVISYQGHEVDLTPQWR 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +A      +D G  + N +       +  A++  + V    T+  I +    + +
Sbjct: 325 RVSMVDAVKEIVGVDFGVEMSNEE------AHRLAKEHKVPVEPHMTFGHILNAFFEQFV 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 379 EET--LIQPTFVTGHPVEISPLAKKNDVDPRFTDRFELFIVAREHANAFSELNDPIDQRQ 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+EK++  +E + +DEDFL  L   MP + G+ +G DRL+ML+T A +I +V+  
Sbjct: 437 RFEAQMKEKEQGNDEAHEMDEDFLRALEYGMPPTGGLGIGIDRLIMLLTNAPSIRDVLLF 496

Query: 346 PFSQSNQ 352
           P  ++ +
Sbjct: 497 PHMRNKE 503


>gi|295401954|ref|ZP_06811916.1| lysyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109229|ref|YP_003987545.1| lysyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294975956|gb|EFG51572.1| lysyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214330|gb|ADP72934.1| lysyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 494

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y   + ++E+++ 
Sbjct: 141 LRPLPEKYHGLKDIEQRYRQRYLDLIMNPDSKNTFITRSRIIQSMRRYLDSHGYLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +  PLY++ + E   K+L+  G EK++     +RN 
Sbjct: 201 MMHNIAGGAA-ARPFITH---HNALDMPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M    N+I   A+ V       +     +   E +
Sbjct: 257 GVSTRHNPEFTMLELYEAYADFRDIMTLTENLIAHIAQEVLGTTKIQYGEHKVDLTPEWK 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   Y  +D    + + +          A++ G+ +A   T+  I +    +K+
Sbjct: 317 RLHMVDAIKEYVGVDFWKQMSDEE------ARELAKEHGVEIAPHMTFGHIVNEFFEQKV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 371 EDK--LIQPTFIYGHPVEISPLAKKNPDDPRFTDRFELFIVGREHANAFTELNDPIDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 429 RFEAQLKEREQGNDEAHEMDEDFIEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLF 488

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 489 PQMRNK 494


>gi|146308389|ref|YP_001188854.1| lysyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166229818|sp|A4XXQ6|SYK_PSEMY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145576590|gb|ABP86122.1| lysyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 505

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 155/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R +  E  F+E+++ 
Sbjct: 150 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEETRHTFRVRSQVIAHIRRFLNERGFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 210 MLQTIPGGAA-AKPFETH---HNALDMQMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y   M     + R  A          + +   +      
Sbjct: 266 GVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELALAVLGTTDVPYGDKVFHFGEPFV 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        +   D  D       A++AG +V   +    +   I  E +
Sbjct: 326 RLSVYDSILKY-----NPDITEADLNDVDKARAIAKKAGAKVLGHEGLGKLQVMIFEELV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 381 ESK--LEQPHFITEYPFEVSPLARRNDQNPAVTDRFELFIGGREIANAYSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 439 RFHAQVAEKDAGDDEAMHFDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 498

Query: 346 PFSQSN 351
           P  +  
Sbjct: 499 PHMRPQ 504


>gi|18311447|ref|NP_563381.1| lysyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|168218225|ref|ZP_02643850.1| lysyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|169343177|ref|ZP_02864198.1| lysyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|39932227|sp|Q8XHL8|SYK_CLOPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|18146131|dbj|BAB82171.1| lysine-tRNA ligase [Clostridium perfringens str. 13]
 gi|169298729|gb|EDS80805.1| lysyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|182379764|gb|EDT77243.1| lysyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 501

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 166/370 (44%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I  ++RE+     F+E+D+ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+ AG EK++     +RN 
Sbjct: 204 ILSPIAGGAA-ARPFITH---HNALDIDMYLRIATELYLKRLIVAGFEKVYEMGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N+I    E        +++    +      
Sbjct: 260 GVSVRHNPEFTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD---DTWSDIFSRILI 223
            IT+ +A   +A ID        +          A++  +         T  ++ + +  
Sbjct: 320 RITMVDAVKEFAGIDFN------EIKSDEEAQAIAKEKNLEFPKPLDKVTKGEVLNMLFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T L  YP   S L      +  FT+RFE +    E+CNA  EL DPI 
Sbjct: 374 EYGEDK--LIQPTFLIDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCNAYSELNDPIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE++ +E++   +E Y +DE+F++ L   MP + G+ +G DR++M +T +++I +V
Sbjct: 432 QRERFEQQAREREYGDDEAYMLDEEFMSALETGMPPTGGLGIGIDRMIMFLTDSSSIRDV 491

Query: 343 IWTPFSQSNQ 352
           I  P  +  +
Sbjct: 492 ILFPTMKPQK 501


>gi|330504611|ref|YP_004381480.1| lysyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328918897|gb|AEB59728.1| lysyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 500

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 155/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R +  +  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEETRHTFRVRSQVIAHIRRFLNDRGFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMAMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y   M     + R  A          + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELALAVLGTTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        +   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVYDSILKY-----NPDITEADLNDVDKARSIAKKAGAKVLGHEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 ESK--LEQPHFITEYPFEVSPLARRNDQNPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|110800440|ref|YP_697153.1| lysyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|123344474|sp|Q0TMI7|SYK_CLOP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|110675087|gb|ABG84074.1| lysyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 501

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 166/370 (44%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I  ++RE+     F+E+D+ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+ AG EK++     +RN 
Sbjct: 204 ILSPIAGGAA-ARPFITH---HNALDIDMYLRIATELYLKRLIVAGFEKVYEMGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N+I    E        +++    +      
Sbjct: 260 GVSVRHNPEFTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD---DTWSDIFSRILI 223
            IT+ +A   +A ID        +          A++  +         T  ++ + +  
Sbjct: 320 RITMVDAVKEFAGIDFN------EIKSDEEAQAIAKEKNLEFPKPLDKVTKGEVLNMLFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T L  YP   S L      +  FT+RFE +    E+CNA  EL DPI 
Sbjct: 374 EYGEDK--LIQPTFLIDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCNAYSELNDPIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE++ +E++   +E Y +DE+F++ L   MP + G+ +G DR++M +T +++I +V
Sbjct: 432 QRERFEQQAREREYGDDEAYMLDEEFMSALETGMPPTGGLGIGIDRMIMFLTDSSSIRDV 491

Query: 343 IWTPFSQSNQ 352
           I  P  +  +
Sbjct: 492 ILFPTMKPQK 501


>gi|261403949|ref|YP_003240190.1| lysyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261280412|gb|ACX62383.1| lysyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 503

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 176/367 (47%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +    +D    YR+R              + R+ I  S+R Y     ++E+++ 
Sbjct: 149 LYPLPEKFHGLKDVELRYRQRYVDLIINPDVQKTFITRSRIIQSMRRYLDSQGYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 209 TLHSIAGGAA-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVYRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N+I   A+ V   ++ S+Q    +   +  
Sbjct: 265 GISTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTQVISYQGHEVDLTPQWR 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +A      +D    + N +       +  A++  + V    T+  I +    + +
Sbjct: 325 RVSMVDAVKEVVGVDFSVDMSNEE------AHRLAKEHKVPVEPHMTFGHILNAFFEQFV 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 379 EET--LIQPTFVTGHPVEISPLAKKNDVDPRFTDRFELFIVAREHANAFSELNDPIDQRQ 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+EK++  +E + +DEDFL  L   MP + G+ +G DRL+ML+T + +I +V+  
Sbjct: 437 RFEAQMKEKEQGNDEAHEMDEDFLRALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLF 496

Query: 346 PFSQSNQ 352
           P  ++ +
Sbjct: 497 PHMRNKE 503


>gi|229496852|ref|ZP_04390561.1| lysyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316263|gb|EEN82187.1| lysyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 581

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 112/373 (30%), Positives = 169/373 (45%), Gaps = 35/373 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YRRR              LKRN I +S+R +F E+ 
Sbjct: 147 LRPLPIVKEKDGKVFDGFTDPEQRYRRRYVDLLVNDGVRDIFLKRNKIFTSMRNFFNEHG 206

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           ++E+++  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G E ++ F
Sbjct: 207 YLEVETPILQSIPGGAA-ARPFITH---HNALDIPLYLRIANELYLKRLIVGGFEGVYEF 262

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNC 159
           +  +RN      H PEFT +E Y A++ Y  LM    +++ R A EV         +   
Sbjct: 263 SRNFRNEGMDRTHNPEFTCMEIYVAYKDYNWLMDFTESMLSRIAQEVLGTTEVKVGDHEI 322

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I + EA   +  ID+          D   L    +Q GI          +  
Sbjct: 323 SFRPPFKRIPILEAIKEHTGIDISGM-------DEDQLREVCKQLGIETTPSMGKGKLID 375

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  EK E        T +  YP   S L   +  +P  T+RFEL     EL NA  EL 
Sbjct: 376 EIFGEKCEGKY--IQPTFITDYPKEMSPLTKEHRTNPELTERFELMVNGKELANAYSELN 433

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+QR RFE ++   +K  +E   ID+DFL  L   MP ++G+ +G DRLVML+TG  +
Sbjct: 434 DPIDQRKRFEDQLALSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGMDRLVMLLTGQES 493

Query: 339 INEVIWTPFSQSN 351
           I EV++ P  +  
Sbjct: 494 IQEVLFFPQMKPE 506


>gi|257058766|ref|YP_003136654.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256588932|gb|ACU99818.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 573

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 106/367 (28%), Positives = 167/367 (45%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +S+R Y  EN FIEI++ 
Sbjct: 156 LLPLPDKWHGLTDTEKRYRQRYVDLIVNPQVRQTFRRRAQITASIRRYLDENGFIEIETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 216 VLQSEAGGA-EARPFIT---YHNTLDMELYLRIATELHLKRLIIGGFEKVFELGRIFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M+    +I  AA+        ++Q +  +  +   
Sbjct: 272 GVSTKHNPEFTSIEVYQAYADYFDMMELTEALITNAAQAVLGTLKLTYQEIEIDLSTPWR 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            +T+ +       +D  +        D       A++AGI V +D      + +    +K
Sbjct: 332 RVTMTDIVKEKTGLDFDSF------TDFESAKEAAKKAGIDVPNDCPSLGKLMNEAFEQK 385

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA  + +     +RFELY    EL N+  EL DPI+QR
Sbjct: 386 VEET--LIQPTFILDFPVEISPLAKPHRSKKGLVERFELYIVGRELANSFSELTDPIDQR 443

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R EK+ ++K     E   +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 444 ERLEKQAEQKASGDLEAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 503

Query: 345 TPFSQSN 351
            P  +S 
Sbjct: 504 FPLLKSQ 510


>gi|307266257|ref|ZP_07547798.1| lysyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918707|gb|EFN48940.1| lysyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 499

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 163/368 (44%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              LKR  I  ++RE+     F+E+++ 
Sbjct: 144 LQILPEKWHGLKDPDLRYRQRYTDLIINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILHTIAGGAA-ARPFITH---HNALDIDMYLRIALELHLKRLIVGGLEKVYEMGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y A+  Y  +M+    +    A+         +Q    +     +
Sbjct: 260 GMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQGTEIDLTPPWK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   Y  +D      + +          A++  +         ++ + +  E +
Sbjct: 320 RITMVDAIKEYVGVDFNEVKTDAE------AVEIAKRLNLETKEGMKKGEVIALVFDELV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     +P FT RFE +    E+ NA  EL DPI+Q+ 
Sbjct: 374 EQH--LIQPTFVMDYPVEISPLAKRKHDNPAFTSRFEAFIYGREVANAFSELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++++    E + +DEDF+  L   MP + G+ +G DRLVM +T A +I +VI  
Sbjct: 432 RFLEQLKQREAGDEEAHMMDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILF 491

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 492 PTMKPRND 499


>gi|168215147|ref|ZP_02640772.1| lysyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170713448|gb|EDT25630.1| lysyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 501

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 166/370 (44%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I  ++RE+     F+E+D+ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+ AG EK++     +RN 
Sbjct: 204 ILSPIAGGAA-ARPFITH---HNALDIDMYLRIATELYLKRLIVAGFEKVYEMGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N+I    E        +++    +      
Sbjct: 260 GVSVRHNPEFTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD---DTWSDIFSRILI 223
            IT+ +A   +A ID        +          A++  +         T  ++ + +  
Sbjct: 320 RITMVDAVKEFAGIDFN------EIKSDEEAQAIAKEKNLEFPKPLDKVTKGEVLNMLFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T L  YP   S L      +  FT+RFE +    E+CNA  EL DPI 
Sbjct: 374 EYGEDK--LIQPTFLIDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCNAYSELNDPIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE++ +E++   +E Y +DE+F++ L   MP + G+ +G DR++M +T +++I +V
Sbjct: 432 QRERFEQQAREREYGDDEAYMLDEEFMSALETGMPPTGGLGIGIDRMIMFLTDSSSIRDV 491

Query: 343 IWTPFSQSNQ 352
           I  P  +  +
Sbjct: 492 ILFPTMKPQK 501


>gi|110803200|ref|YP_699721.1| lysyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123047148|sp|Q0SQ86|SYK_CLOPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|110683701|gb|ABG87071.1| lysine--tRNA ligase [Clostridium perfringens SM101]
          Length = 501

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 166/370 (44%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I  ++RE+     F+E+D+ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQREVDIITNPEVKDTFIKRSQIVKAIREFLDNRGFLEVDTP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+ AG EK++     +RN 
Sbjct: 204 ILSPIAGGAA-ARPFITH---HNALDIDMYLRIATELYLKRLIVAGFEKVYEMGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N+I    E        +++    +      
Sbjct: 260 GVSVRHNPEFTAIELYEAYADYNDMMEIMENMIAYVCEKVNGSTKVTYEGTEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD---DTWSDIFSRILI 223
            IT+ +A   +A ID        +          A++  +         T  ++ + +  
Sbjct: 320 RITMVDAVKEFAGIDFN------EIKSDEEAQAIAKEKNLEFPKPLDKVTKGEVLNMLFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T L  YP   S L      +  FT+RFE +    E+CNA  EL DPI 
Sbjct: 374 EYGEDK--LIQPTFLVDYPVEISPLTKKKRGNEMFTERFEGFVYGREVCNAYSELNDPIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE++ +E++   +E Y +DE+F++ L   MP + G+ +G DR++M +T +++I +V
Sbjct: 432 QRERFEQQAREREYGDDEAYMLDEEFMSALETGMPPTGGLGIGIDRMIMFLTDSSSIRDV 491

Query: 343 IWTPFSQSNQ 352
           I  P  +  +
Sbjct: 492 ILFPTMKPQK 501


>gi|167039464|ref|YP_001662449.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300915430|ref|ZP_07132743.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725210|ref|YP_003904961.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|238687610|sp|B0K5C0|SYK_THEPX RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166853704|gb|ABY92113.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300888490|gb|EFK83639.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582271|gb|ADN55670.1| lysyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 499

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 162/368 (44%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              LKR  I  ++RE+     F+E+++ 
Sbjct: 144 LQILPEKWHGLKDPDLRYRQRYTDLIINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILHTIAGGAA-ARPFITH---HNALDIDMYLRIALELHLKRLIVGGLEKVYEMGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y A+  Y  +M+    +    A+         +Q    +     +
Sbjct: 260 GMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQGTEIDLTPPWK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   Y  +D        +          A++  +         ++ + +  E +
Sbjct: 320 RITMVDAIKEYVGVDFN------EVKADAEAVEIAKRLNLETKEGMKKGEVIALVFDELV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     +P FT RFE +    E+ NA  EL DPI+Q+ 
Sbjct: 374 EQH--LIQPTFVMDYPVEISPLAKRKHDNPAFTSRFEAFIYGREVANAFSELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++++    E + +DEDF+  L   MP + G+ +G DRLVM +T A +I +VI  
Sbjct: 432 RFLEQLKQREAGDEEAHMMDEDFINALEVGMPPTGGLGIGVDRLVMFMTDAYSIRDVILF 491

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 492 PTMKPKND 499


>gi|329925492|ref|ZP_08280366.1| lysine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328939775|gb|EGG36115.1| lysine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 505

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 176/367 (47%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +    +D    YR+R              + R+ I  S+R Y     ++E+++ 
Sbjct: 151 LYPLPEKFHGLKDVELRYRQRYVDLIINPDVQKTFITRSRIIQSMRRYLDSQGYLEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 211 TLHSIAGGAA-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVYRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N+I   A+ V   ++ S+Q    +   +  
Sbjct: 267 GISTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTQVISYQGHEVDLTPQWR 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +A      +D    + N +       +  A++  + V    T+  I +    + +
Sbjct: 327 RVSMVDAVKEVVGVDFSVDMSNEE------AHRLAKEHKVPVEPHMTFGHILNAFFEQFV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 381 EET--LIQPTFVTGHPVEISPLAKKNDVDPRFTDRFELFIVAREHANAFSELNDPIDQRQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+EK++  +E + +DEDFL  L   MP + G+ +G DRL+ML+T + +I +V+  
Sbjct: 439 RFEAQMKEKEQGNDEAHEMDEDFLRALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLF 498

Query: 346 PFSQSNQ 352
           P  ++ +
Sbjct: 499 PHMRNKE 505


>gi|114565688|ref|YP_752842.1| lysyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122319141|sp|Q0B0N3|SYK_SYNWW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|114336623|gb|ABI67471.1| lysyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 493

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 105/369 (28%), Positives = 173/369 (46%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I   +R Y  +  F+E+++ 
Sbjct: 136 LTPLPEKWHGLKDVELRYRQRYVDLIVNPEVKEVFVKRSRIIKEMRNYLDDRGFLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F T     + +   LYL+ +PE   K+L+  G EK++     +RN 
Sbjct: 196 MMQPIPGGAT-ARPFITH---HNALDMELYLRIAPELYLKRLIVGGLEKVYEINRNFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y+A+  YE +M+ C ++I     +V       F+    +      
Sbjct: 252 GISTRHNPEFTMLEIYQAYGDYEVMMQLCEDLISAVMLKVNGSMQIDFEGEQLDFTPPWR 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A    A +D      + D          A Q G+ V    +  ++ + I  + +
Sbjct: 312 RVTMLDAIKEAAGLDFSLIKSDED------ACQAAWQLGLEVKAGASRGELINEIFEQFV 365

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA      P FT RFEL+    E+ NA  EL DPI+Q+ 
Sbjct: 366 EDK--LIQPTFVYGHPVEVSPLAKRNLETPEFTDRFELFIMQREIANAFSELNDPIDQKE 423

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++++     E + +DED++  L   MP + G+ +G DRLVML+TG+ +I +VI  
Sbjct: 424 RFIKQVEKRAGGDAEAHMMDEDYINALEYGMPPAGGMGIGIDRLVMLMTGSPSIRDVILF 483

Query: 346 PFSQSNQEE 354
           P  +    E
Sbjct: 484 PTLRPRSSE 492


>gi|182420117|ref|ZP_02951351.1| lysyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669572|ref|ZP_04529552.1| lysine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376154|gb|EDT73741.1| lysyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655016|gb|EEP52576.1| lysine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 501

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 165/370 (44%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I S++RE+     F+E+++ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQRELDIITNSEVKDTFVKRSRIISAMREFLDNRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   ++L+ +PE   K+L+ AG EK++     +RN 
Sbjct: 204 ILSPIAGGAA-AKPFVTH---HNTLDMDMFLRIAPELYLKRLIVAGFEKVYEIGRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N++     ++      ++Q    +      
Sbjct: 260 GMSVRHNPEFTAIELYEAYSDYNDMMEITENMVAYVCEKINGTTKVTYQGTEIDFMPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT---WSDIFSRILI 223
            IT+ +A   YA +D  T   + +          A++  +            ++ + +  
Sbjct: 320 RITMVDAVKEYAGVDFTTINSDEE------AQAIAKEKNLEFPKPLNTVTKGEVLNALYE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E  +     T +  YP   S L      +  FT+RFE +    EL NA  EL DPI 
Sbjct: 374 EFGEEKM--IQPTFIMDYPVENSPLTKKKRGNAEFTERFEAFVFGRELGNAYSELNDPIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE++   ++   +E Y +DE F++ L   MP + G+ +G DRL+M +T + +I +V
Sbjct: 432 QRERFEQQANARELGDDEAYMLDEQFMSALETGMPPTGGLGIGIDRLIMFLTDSASIRDV 491

Query: 343 IWTPFSQSNQ 352
           I  P  +  +
Sbjct: 492 ILFPTMKPQK 501


>gi|319654915|ref|ZP_08008989.1| lysyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317393340|gb|EFV74104.1| lysyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 496

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 170/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y   + ++E+++ 
Sbjct: 143 LRPLPDKFHGLKDVEQRYRQRYLDLIMSEESKQTFITRSRIIQSMRRYLDSHGYLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 203 MMHSIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    N+I   A+ V       +     +   E +
Sbjct: 259 GVSTRHNPEFTMIELYEAYADYRDIMSLTENLIAHIAQEVLGTTSVQYGEYEVDLKPEWK 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   Y  +D         +  +      A++ G+ +  +  +  I +    +K+
Sbjct: 319 RLHMVDAIKEYTGVDFWK------ETSKEEAQQLAKEHGVEIKDNMEYGHIVNEFFEQKV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 373 EEK--LIQPTFIYGHPVEISPLAKKNEEDPRFTDRFELFIVAREHANAFTELNDPIDQRE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+DF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 431 RFEAQLKEREEGNDEAHMMDDDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 490

Query: 346 PFSQSN 351
           P  +  
Sbjct: 491 PLMRHR 496


>gi|107103214|ref|ZP_01367132.1| hypothetical protein PaerPA_01004283 [Pseudomonas aeruginosa PACS2]
 gi|218890023|ref|YP_002438887.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254236610|ref|ZP_04929933.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|254242395|ref|ZP_04935717.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|226736753|sp|B7V0Z5|SYK_PSEA8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126168541|gb|EAZ54052.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126195773|gb|EAZ59836.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218770246|emb|CAW26011.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 501

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R +  E  F+E+++ 
Sbjct: 146 LRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVIAHIRRFLSERGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 206 MLQTIPGGAA-AKPFETH---HNALDMAMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+         + +   +      
Sbjct: 262 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGTTDVPYGDKVFHFGEPFV 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        +   D  D       A++AG +V   +    +   I  E +
Sbjct: 322 RLSVFDSILKY-----NPEITAADLNDVEKARAIAKKAGAKVLGHEGLGKLQVMIFEELV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + RYP   S LA     DP  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 377 EHK--LEQPHFITRYPFEVSPLARRNDEDPSVTDRFELFIGGREIANAYSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++EK    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 435 RFMLQVKEKDAGDDEAMHYDADFINALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 494

Query: 346 PFSQSN 351
           P  +  
Sbjct: 495 PHMRPQ 500


>gi|116051697|ref|YP_789464.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296387793|ref|ZP_06877268.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|313109106|ref|ZP_07795078.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|122260840|sp|Q02RH2|SYK_PSEAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|115586918|gb|ABJ12933.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310881580|gb|EFQ40174.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 501

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R +  E  F+E+++ 
Sbjct: 146 LRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVIAHIRRFLSERGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 206 MLQTIPGGAA-AKPFETH---HNALDMAMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+         + +   +      
Sbjct: 262 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGTTDVPYGDKVFHFGEPFV 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        +   D  D       A++AG +V   +    +   I  E +
Sbjct: 322 RLSVFDSILKY-----NPEISAADLNDVEKARAIAKKAGAKVLGHEGLGKLQVMIFEELV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + RYP   S LA     DP  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 377 EHK--LEQPHFITRYPFEVSPLARRNDEDPSVTDRFELFIGGREIANAYSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++EK    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 435 RFMLQVKEKDAGDDEAMHYDADFINALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 494

Query: 346 PFSQSN 351
           P  +  
Sbjct: 495 PHMRPQ 500


>gi|308171972|ref|YP_003918677.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307604836|emb|CBI41207.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328551783|gb|AEB22275.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328910043|gb|AEB61639.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 499

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y  ++ ++E+++ 
Sbjct: 146 LRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYLDDHGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++   PG  +  R F T     + +  PLY++ + E   K+L+  G EK++     +RN 
Sbjct: 206 TMHSIPGGAS-ARPFITH---HNALDMPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N++   A+ V       +     +   E +
Sbjct: 262 GVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQIDLKPEWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +              A++ GI + +  T   I +    +KI
Sbjct: 322 RLHMVDAVKEATGVDFWNEMTV------EEARSHAKEHGIEITNSMTVGHIINEFFEQKI 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EET--LIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +DEDF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PQMRHR 499


>gi|16077150|ref|NP_387963.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221307892|ref|ZP_03589739.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221312214|ref|ZP_03594019.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221317147|ref|ZP_03598441.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321410|ref|ZP_03602704.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|586058|sp|P37477|SYK_BACSU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|467470|dbj|BAA05316.1| lysyl-tRNA thynthetase [Bacillus subtilis]
 gi|2632349|emb|CAB11858.1| lysyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 499

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 100/364 (27%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y  ++ ++E+++ 
Sbjct: 146 LRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYLDDHGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++   PG  +  R F T     + +  PLY++ + E   K+L+  G EK++     +RN 
Sbjct: 206 TMHSIPGGAS-ARPFITH---HNALDIPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N++   A+ V       +     +   E +
Sbjct: 262 GVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQIDLKPEWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D        ++         A++  + +    T   I +    +KI
Sbjct: 322 RIHMVDAVKEATGVDFW------EEVTVEQAREYAKEHEVEIKDSMTVGHIINEFFEQKI 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EET--LIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E++   +E + +DEDF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEAQLKEREAGNDEAHLMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 493

Query: 346 PFSQ 349
           P  +
Sbjct: 494 PQMR 497


>gi|15598896|ref|NP_252390.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|38258401|sp|Q9HXU0|SYK_PSEAE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|9949865|gb|AAG07088.1|AE004789_8 lysyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
          Length = 501

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 160/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R +  E  F+E+++ 
Sbjct: 146 LRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVIAHIRRFLSERGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 206 MLQTIPGGAA-AKPFETH---HNALDMAMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 262 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQSVLGTTDVPYGDKVFHFGEPFV 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        +   D  D       A++AG +V   +    +   I  E +
Sbjct: 322 RLSVFDSILKY-----NPEITAADLNDVEKARAIAKKAGAKVLGHEGLGKLQVMIFEELV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + RYP   S LA     DP  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 377 EHK--LEQPHFITRYPFEVSPLARRNDEDPSVTDRFELFIGGREIANAYSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++EK    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 435 RFMLQVKEKDAGDDEAMHYDADFINALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 494

Query: 346 PFSQSN 351
           P  +  
Sbjct: 495 PHMRPQ 500


>gi|187935723|ref|YP_001884425.1| lysyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187723876|gb|ACD25097.1| lysine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 501

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 167/370 (45%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I S +RE+     F+E+++ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQREVDIITNPEVKETFIKRSKIISGIREFLDTKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+ AG EK++     +RN 
Sbjct: 204 ILAPIAGGAA-AKPFVTH---HNTLDIDMYLRIATELYLKRLVVAGFEKVYEIGRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N++    E        ++Q    +      
Sbjct: 260 GMSVRHNPEFTAIELYEAYSDYNDMMEITENMVAYVCEKVNGTTKVTYQGTEIDFMPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT---WSDIFSRILI 223
            +T+ +    +A +D  T   + +          A++  +  A         ++ + +  
Sbjct: 320 RVTMVDVVKEHAGVDFTTIKSDEE------AQAIAKEKHLEFAKPLNTVTKGEVLNALYE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E N+     T +  YP   S L      +  FT+RFE +    ELCNA  EL DP+ 
Sbjct: 374 EFGEANM--IQPTFVMDYPVEISPLTKKKRGNEEFTERFEGFVFGRELCNAYSELNDPVV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE++ +E++   +E Y +DE F++ L   MP + G+ MG DRL+M +T A++I +V
Sbjct: 432 QRQRFEQQAKERELGDDEAYMLDEQFMSALETGMPPTGGMGMGIDRLIMFLTDASSIRDV 491

Query: 343 IWTPFSQSNQ 352
           I  P  +  +
Sbjct: 492 ILFPTMKPQK 501


>gi|83589024|ref|YP_429033.1| lysyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123739358|sp|Q2RM49|SYK_MOOTA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|83571938|gb|ABC18490.1| lysyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 489

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 162/368 (44%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R +     F+E+++ 
Sbjct: 134 LRPLPEKWHGLKDVDLRYRQRYLDLIVNPEVKQVFITRARIIRAIRSFLDNRGFLEVETP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++    G     R F T     + +   LYL+ + E   K+LL  G EK++     +RN 
Sbjct: 194 TMHPIAGGAA-ARPFITH---HNALDIDLYLRIALELHLKRLLVGGLEKVYEMGRIFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y+A+  Y  +M     ++   A       + ++Q    +      
Sbjct: 250 GISTKHNPEFTMLELYQAYADYYVMMDLLEEMVAYVAREALGTTVVTYQGDRLDLTPPWP 309

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y  +D          P        A   G+ +        I + +    +
Sbjct: 310 RLTMLEAIKKYYGVDFDQ------LPTAEDARRAAISLGLEIEPGMERGKIINEVFEATV 363

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP+  +   T +  YP   S LA     +P FT RFE +    EL NA  EL DPI+QR 
Sbjct: 364 EPH--LIQPTFILDYPVAISPLAKRKKENPDFTYRFEAFIAGRELANAFSELNDPIDQRR 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+     E + +DEDFL  L   MP + G+ +G DRLVM++T + +I +VI  
Sbjct: 422 RFEAQMAERAAGDEEAHMMDEDFLQALEYGMPPAGGMGIGIDRLVMVLTDSPSIRDVILF 481

Query: 346 PFSQSNQE 353
           P  +  +E
Sbjct: 482 PTMRPKEE 489


>gi|256831144|ref|YP_003159872.1| lysyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256580320|gb|ACU91456.1| lysyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 502

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +    +D    YR+R               KR  I   +R +  E  F+E+++ 
Sbjct: 146 MRPLPEKYHGLKDVETRYRQRYVDLLVNDRARDIFRKRTAIVQFIRNFLNERGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G  T  + F T     + +   L+L+ +PE   K+LL  G ++++     +RN 
Sbjct: 206 MMQPIAGGAT-AKPFRTH---HNALDMDLFLRIAPELYLKRLLVGGFDRVYEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE-PE 166
                H PEFTM+E+Y A+ ++  LM     ++   A+            N     +   
Sbjct: 262 GIDTRHNPEFTMIEFYWAYATFVDLMDLTQELLGDLAKSVCGTHLVEYQGNVIDLQDGWV 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +   E+      +            D       AQ+ G  V   +    + +++    +
Sbjct: 322 RMPFHESLEIIGGVSPEIYR------DYDKCKDLAQKLGEAVHPKEKLGKLQAKLFDNLV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +     +  YP   S L+    A+P  T RFEL+ C  E+ NA  EL DP +Q+ 
Sbjct: 376 EPK--LIQPHFIYHYPTDISPLSRKNDANPEITDRFELFICGQEMANAFSELNDPYDQKD 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++++EK    +E + +DED++  L   MP ++G  +G DRLVML+T + +I EVI  
Sbjct: 434 RFEEQVREKAAGDDEAHAMDEDYIRALEYGMPPAAGQGIGIDRLVMLLTDSPSIREVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PLLRPE 499


>gi|154684600|ref|YP_001419761.1| lysyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154350451|gb|ABS72530.1| LysS [Bacillus amyloliquefaciens FZB42]
          Length = 499

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 174/364 (47%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y  ++ ++E+++ 
Sbjct: 146 LRPLPDKYHGLKDVEQRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYLDDHGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++   PG  +  R F T     + +  PLY++ + E   K+L+  G EK++     +RN 
Sbjct: 206 TMHSIPGGAS-ARPFITH---HNALDMPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N++   A+ V       +     +   E +
Sbjct: 262 GVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQIDLKPEWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +              A++ GI + +  T   I +    +KI
Sbjct: 322 RLHMVDAVKEATGVDFWNEMTV------EEARGHAKEHGIEITNSMTVGHIINEFFEQKI 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EET--LIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +DEDF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 493

Query: 346 PFSQ 349
           P  +
Sbjct: 494 PQMR 497


>gi|304315888|ref|YP_003851033.1| lysyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302777390|gb|ADL67949.1| lysyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 506

 Score =  352 bits (902), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 97/369 (26%), Positives = 165/369 (44%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  ++RE+     FIE+++ 
Sbjct: 142 LQVLPDKWHGLKDPDLRYRQRYVDLIINPGVKETFIKRTAIIKAIREFLDSRGFIEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 202 ILHTIAGGAA-ARPFITH---HNALDIDMYLRIALELHLKRLIVGGLEKVYEMGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y A+  Y  +M    N+    AE     K   +Q    +      
Sbjct: 258 GMDIRHNPEFTLLELYEAYTDYHGMMDITENLFAYVAEKVNGSKKIVYQGTEIDLTPPWR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A   + +ID      + +          A++  + V       DI + +  E  
Sbjct: 318 RLTMIDAIKEFLDIDFNKVSSDEE------AIEIAKKNHLEVKEGMKKGDIIALVFDELC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     +P  T RFE +    E+ NA  EL DPI+Q+ 
Sbjct: 372 ESH--LIQPTFIMDYPVEISPLAKRKHDNPALTSRFEAFIYGREVANAFSELNDPIDQKE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++++   +E + +DEDF+  L   MP + G+ +G DRL+M +T A +I +VI  
Sbjct: 430 RFIEQLKQREAGNDEAHMMDEDFINALEVGMPPTGGLGIGVDRLIMFMTDAYSIRDVILF 489

Query: 346 PFSQSNQEE 354
           P  +   E+
Sbjct: 490 PTMKPKAEQ 498


>gi|311029015|ref|ZP_07707105.1| lysyl-tRNA synthetase [Bacillus sp. m3-13]
 gi|311032311|ref|ZP_07710401.1| lysyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 496

 Score =  352 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 171/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y  ++ ++E+++ 
Sbjct: 143 LRPLPEKYHGLKDVEQRYRQRYLDLITNPESRETFIARSKIIQAMRRYLDDHGYLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 203 MMHSIAGGAS-ARPFITH---HNTLDMTLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N++   A+ V       + +   +   E +
Sbjct: 259 GVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAKEVLGSTKVQYADSEIDLTPEWK 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    + +            A++ GI++     +  I +    +K+
Sbjct: 319 RLHMVDAVKEATGVDFWQQMTD------EEARALAKEHGIQITEHMQFGHILNEFFEQKV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 373 EET--LIQPTFIYGHPVEISPLAKKNAEDPRFTDRFELFIVGREHANAFTELNDPIDQKE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++EK++  +E + +D DF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 431 RFEAQLKEKEQGNDEAHEMDHDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 490

Query: 346 PFSQSN 351
           P  +  
Sbjct: 491 PQMRHR 496


>gi|254524293|ref|ZP_05136348.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219721884|gb|EED40409.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 489

 Score =  352 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 160/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +     F+E+++ 
Sbjct: 134 LRPLPDKWHGLADVEQRYRQRYVDLIVTPESRAVFIKRSKIIRAMRAWLDNRDFLEVETP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG     + F+T     + +   LYL+ +PE   K+L   G E+++     +RN 
Sbjct: 194 MMHYIPGGAA-AKPFTTH---HNALDLDLYLRVAPELYLKRLTVGGLERVYEINRNFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+ +Y ++M     +IR  A+         +     +      
Sbjct: 250 GVSTRHNPEFTMMELYEAYATYNEIMDLTEGVIRDVAQAVNGGTEVEWDGAKIDLGPAFR 309

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  I+V     W  +   I    +
Sbjct: 310 RWRMDEAVRHH-----NPEISAADCTDRDALLRHCERLKIKVKPSYGWGKLLLEIFEATV 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DP +T RFEL+    EL N   EL DP +Q  
Sbjct: 365 EHT--LIQPTFITDHPVEVSPLARANDNDPGYTDRFELFVNGKELANGFSELNDPEDQAQ 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    D D++  L   M  + G+ +G DRLVML+TG+++I +V+  
Sbjct: 423 RFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPTGGLGIGVDRLVMLLTGSSSIRDVLLF 482

Query: 346 PFSQSNQ 352
           P+ +  Q
Sbjct: 483 PYMRPEQ 489


>gi|291279545|ref|YP_003496380.1| lysyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754247|dbj|BAI80624.1| lysyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 488

 Score =  352 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 173/366 (47%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R++F+EN+FIE+++ 
Sbjct: 133 LRDLPEKWHGLKDVEKRYRQRYVDLIVNDEIRELFILRSKIIQRMRQFFIENEFIEVETP 192

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G  T  R F T     + +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 193 MMQPIAGGAT-ARPFITH---HNALDMTLYLRIAPELYLKRLVIGGLERVFEINRNFRNE 248

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+EWY A+  Y   M    N++   A +V  +   +F     +     +
Sbjct: 249 GISTKHNPEFTMVEWYMAYADYYDQMAFTENMLYTIAKDVLGKTTITFGEYEIDLTPPWD 308

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ ++  +Y +I         D  D       A+   I++  +     I   I  + +
Sbjct: 309 KLTLEDSIEKYTDIKKD------DLKDFDSAKQVAKNLEIKLEKNWGRGKIVLEIFEKTV 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T+RFEL+   +E+ N  +EL DPI+Q+ 
Sbjct: 363 EHK--LIQPTFIIDYPKEVSPLAKSKFDNPDVTERFELFIAGMEVANGFNELNDPIDQKE 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFEK+++ K+    E + +D D++  L   +P ++G  +G DRLVML T  N+I EVI  
Sbjct: 421 RFEKQVEAKEAGDEEAHMMDHDYIRALEYGLPPTAGQGLGVDRLVMLFTNKNSIREVILF 480

Query: 346 PFSQSN 351
           P  +  
Sbjct: 481 PHMRPE 486


>gi|196250797|ref|ZP_03149484.1| lysyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196209747|gb|EDY04519.1| lysyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 447

 Score =  352 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 170/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R++I  S+R Y     ++E+++ 
Sbjct: 94  LRPLPEKYHGLKDVEQRYRQRYLDLTMNPQSKQTFITRSLIIQSMRRYLDSQGYLEVETP 153

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 154 MMHAIAGGAA-ARPFITH---HNALDMTLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 209

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +MK   N+I   A  V       +     +   E  
Sbjct: 210 GISTRHNPEFTMLELYEAYADFRDIMKLTENLIAHIATEVLGTTKIQYGEHTVDLTPEWR 269

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   Y  +D    +      D       A++ G+ +A   T+  I +    +K+
Sbjct: 270 RLHMVDAIKEYVGVDFWRHM------DDEEARALAKEHGVEIAPHMTFGHIVNEFFEQKV 323

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 324 ESQ--LIQPTFIYGHPVEISPLAKKNPDDPRFTDRFELFIVGREHANAFTELNDPIDQRQ 381

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +DEDFL  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 382 RFEAQLKEREQGNDEAHEMDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLF 441

Query: 346 PFSQSN 351
           P  +  
Sbjct: 442 PQMRHK 447


>gi|152984795|ref|YP_001346822.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166229817|sp|A6V187|SYK_PSEA7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|150959953|gb|ABR81978.1| lysyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 501

 Score =  351 bits (901), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R +  E  F+E+++ 
Sbjct: 146 LRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVIAHIRRFLSERGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 206 MLQTIPGGAA-AKPFETH---HNALDMAMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+         + +   +      
Sbjct: 262 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGSTDVPYGDKVFHFGEPFV 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        +   D  D       A++AG +V   +    +   I  E +
Sbjct: 322 RLSVYDSILKY-----NPQITPADLNDVEKARAIARKAGAKVLGHEGLGKLQVMIFEELV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + RYP   S LA     DP  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 377 EHK--LEQPHFITRYPFEVSPLARRNDEDPSVTDRFELFIGGREIANAYSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++EK    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 435 RFMLQVKEKDAGDDEAMHYDADFINALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 494

Query: 346 PFSQSN 351
           P  +  
Sbjct: 495 PHMRPQ 500


>gi|303228849|ref|ZP_07315662.1| lysine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516469|gb|EFL58398.1| lysine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 503

 Score =  351 bits (901), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 94/370 (25%), Positives = 170/370 (45%), Gaps = 27/370 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I + +REY + + F+E+++ 
Sbjct: 140 LRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFIKRSKIVAKIREYMMNDGFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   +Y++ +PE   K+L+  G E++F     +RN 
Sbjct: 200 MMHPIPGGAA-ARPFITH---HNALDIDIYMRIAPELYLKRLIVGGMERVFEMNRCFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   E  ++   N++   A+ V   +  ++Q    N      
Sbjct: 256 GIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEINLTPPWN 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+AE   +Y   D                   A +  +    +D    I +    + +
Sbjct: 316 RITMAEGVKKYTGEDFDAV------TTVEEARAIADRLNVEYTDNDGIGKILNACFEDYV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   TI+  +P   S LA     +P  T+RFE +    EL N   EL DPI+Q+ 
Sbjct: 370 EEN--LIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSELNDPIDQKQ 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E++   +E + +DEDF+  L   +P ++G+ +G DRLVM +T + +I +V+  
Sbjct: 428 RFLDQLKEREAGDDEAHRMDEDFVNALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLF 487

Query: 346 PFSQSNQEEI 355
           P  +    ++
Sbjct: 488 PLMKPETSQV 497


>gi|225009991|ref|ZP_03700463.1| lysyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005470|gb|EEG43420.1| lysyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 564

 Score =  351 bits (901), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 101/378 (26%), Positives = 171/378 (45%), Gaps = 36/378 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  I +S+R++F + 
Sbjct: 136 LRPLPLPKVDADGKVHDEFNDPELRYRQRYVDLIVNPQVKDTFIKRTKITNSIRKFFNDK 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ  PG  +  R F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 196 GYLEVETPILQPIPGGAS-ARPFITH---HNALNMPLYLRVANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVN 158
           F+  +RN      H PEFT++E Y A++ Y  +M     ++   A  +      +     
Sbjct: 252 FSKDFRNEGMDRTHNPEFTVMELYVAYKDYHWMMDTTEKLLETIAMESNGSSKITVGKNA 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
               +    + + EA   +   D+          +R+ L   A+   I V        + 
Sbjct: 312 IEFKAPYPRVPILEAIKIHTGHDVAG-------LNRNELAGVAKSLDIEVTDSMGVGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  E+ E +      T +  YP   S L   + ++P  T+RFEL     EL NA  EL
Sbjct: 365 DEIFGERCEHHYV--QPTFITDYPKEMSPLTKEHRSNPALTERFELMVNGKELANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE ++   +K  +E   ID+DFL  L   MP +SGI +G DRLVML+T   
Sbjct: 423 NDPIDQRARFEDQLALSEKGDDEAMFIDQDFLRALEYGMPPTSGIGIGIDRLVMLMTNNA 482

Query: 338 NINEVIWTPFSQSNQEEI 355
           +I EV++ P  +  ++ +
Sbjct: 483 SIQEVLFFPQMRPEKKAV 500


>gi|104780460|ref|YP_606958.1| lysyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123079246|sp|Q1IDW1|SYK_PSEE4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|95109447|emb|CAK14148.1| lysyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 500

 Score =  351 bits (901), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + S +R++ +E  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMAMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y   M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDVDRAREIAKKAGAKVLGHEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITEYPFEVSPLARRNDDNPAVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|309389964|gb|ADO77844.1| lysyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 493

 Score =  351 bits (901), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 168/369 (45%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     ++D  YR+R              + R+ I   +R Y  +  F+E+++ 
Sbjct: 137 LRPLPEKFHGLKDKDIRYRQRYLDLIVNPDVKETFVIRSKIIKEMRRYLEDKGFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  R F T     + +   LYL+ +PE   KKL+  G EK+F     +RN 
Sbjct: 197 MMHPIAGGAT-ARPFVTH---HNALDMDLYLRIAPELYLKKLIVGGFEKVFEINRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPE 166
                H PEFT +E Y+A   Y  +M+   N+I   A          ++    +  +  +
Sbjct: 253 GMSYKHNPEFTTMELYQAQADYHDMMELTENLISYLAAEVLDTQVVEYEETEIDFTAPWD 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D                Y  A   G++     ++ ++ + +  E++
Sbjct: 313 RITMVDAIKKYAKVDFSAI------ESAEEAYELAASVGVKPEPGLSYGEVINEVFEERV 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DPRFT RFE +    E+ NA  EL DP EQ+ 
Sbjct: 367 EEK--LIQPTFIMDYPIEVSPLAKKMDEDPRFTYRFEAFVYGREIANAFSELNDPEEQKR 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFEK+++ ++    E   +D DF+  L   MP + G+ +G DRL+M +T +++I +VI  
Sbjct: 425 RFEKQVEMREAGDEEAQMMDYDFIRALEYGMPPTGGLGIGIDRLIMFLTNSSSIRDVILF 484

Query: 346 PFSQSNQEE 354
           P  +    E
Sbjct: 485 PTMRPESNE 493


>gi|168187058|ref|ZP_02621693.1| lysyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169295090|gb|EDS77223.1| lysyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 510

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 163/370 (44%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  ++RE+     F+E+++ 
Sbjct: 153 LKPLPEKFHGLKDPDLRYRQRYVDLIMNEEVKETFMKRTAIIKAIREFLDNRDFLEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 213 ILSPIAGGAA-ARPFVTH---HNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKNFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N++    E         ++    +      
Sbjct: 269 GIDVRHNPEFTAIELYEAYADYNDMMEITENMVAYVCEKVNGTTKVMYEGTEIDFKPPWR 328

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILI 223
            +T+ +A   YA +D        +          A++ G+ +     D T  DI   +  
Sbjct: 329 RVTMVDAVKEYAGVDFN------EVKTDEEAREVAKEKGLELKKELKDCTKGDILVALFE 382

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T +  YP   S L      +   T+RFE +    E+CNA  EL DPI 
Sbjct: 383 EFGEEK--LMQPTFICDYPKENSPLTKKKRGNDELTERFEGFVYGREICNAYSELNDPIV 440

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RF ++++E++   +E Y +D+DF+  L   MP + G+ +G DRL+M +T +++I +V
Sbjct: 441 QKERFMQQLKERELGDDEAYMMDDDFINALEIGMPPTGGLGIGIDRLIMFLTDSSSIRDV 500

Query: 343 IWTPFSQSNQ 352
           I  P  +  +
Sbjct: 501 ILFPTMKPTK 510


>gi|319787301|ref|YP_004146776.1| lysyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465813|gb|ADV27545.1| lysyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 509

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 160/366 (43%), Gaps = 24/366 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +  E +F+E+++ 
Sbjct: 152 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFVKRSKIIRAIRSWLDERRFLEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  R F T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 212 MMHYIPGGAT-ARPFVTH---HNALDLQLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE Y A+ +Y ++M    N+IR  A                       
Sbjct: 268 GVSTRHNPEFTMLELYEAYATYHEVMDLTENVIRDTARSVLGTTEVEWEGQRIDLGPAFR 327

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
               +   R+        +   D  DR  L    ++ GI+V     W  +   I    +E
Sbjct: 328 RWRMDEAVRH----HNPEISAADCTDREALLRHCERLGIKVKPAWGWGKLLLEIFEATVE 383

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  R
Sbjct: 384 HT--LIQPTFITDHPVEVSPLARASDTEPGYTDRFELFINGKELANGFSELNDPEDQAAR 441

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+ ++  K+   +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  P
Sbjct: 442 FQAQVAAKEGGDDEAMHYDADYIRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 501

Query: 347 FSQSNQ 352
           + +  Q
Sbjct: 502 YMRPGQ 507


>gi|52078577|ref|YP_077368.1| lysyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52783938|ref|YP_089767.1| lysyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52001788|gb|AAU21730.1| lysyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346440|gb|AAU39074.1| LysS [Bacillus licheniformis ATCC 14580]
          Length = 499

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 176/366 (48%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y  ++ ++E+++ 
Sbjct: 146 LRPLPDKYHGLKDIEQRYRQRYLDLIVNPESKNTFITRSKIIQSMRRYLDDHGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++   PG  +  R F T     + +  PLY++ + E   K+L+  G EK++     +RN 
Sbjct: 206 TMHAIPGGAS-ARPFITH---HNALDMPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M+   N+I   A+ V       + +   +   E +
Sbjct: 262 GVSTRHNPEFTMIELYEAYADYKDIMRLTENLIAHIAQEVLGTTTVQYGDYEVDLKPEWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +              A++ GI ++   +   I +    +K+
Sbjct: 322 RLHMVDAVKEATGVDFWKEVSV------EEARAYAKEHGIEISEGMSVGHIINEFFEQKV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 376 EET--LIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +DEDF+  L   MP + G+ +G DRL+ML+T + +I +V+  
Sbjct: 434 RFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PQMRHR 499


>gi|303230964|ref|ZP_07317707.1| lysine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514346|gb|EFL56345.1| lysine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 504

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 94/370 (25%), Positives = 170/370 (45%), Gaps = 27/370 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I + +REY + + F+E+++ 
Sbjct: 140 LRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFIKRSKIVAKIREYMMNDGFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   +Y++ +PE   K+L+  G E++F     +RN 
Sbjct: 200 MMHPIPGGAA-ARPFITH---HNALDIDIYMRIAPELYLKRLIVGGMERVFEMNRCFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   E  ++   N++   A+ V   +  ++Q    N      
Sbjct: 256 GIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEINLTPPWN 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+AE   +Y   D                   A +  +    +D    I +    + +
Sbjct: 316 RITMAEGVKKYTGEDFDAV------TTVEEARAIADRLNVEYTENDGIGKILNACFEDYV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   TI+  +P   S LA     +P  T+RFE +    EL N   EL DPI+Q+ 
Sbjct: 370 EEN--LIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSELNDPIDQKQ 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E++   +E + +DEDF+  L   +P ++G+ +G DRLVM +T + +I +V+  
Sbjct: 428 RFLDQLKEREAGDDEAHRMDEDFVNALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLF 487

Query: 346 PFSQSNQEEI 355
           P  +    ++
Sbjct: 488 PLMKPETSQV 497


>gi|330959167|gb|EGH59427.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 500

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDVDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|253681352|ref|ZP_04862150.1| lysine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562590|gb|EES92041.1| lysine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 510

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 162/370 (43%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  ++RE+     F+E+++ 
Sbjct: 153 LKPLPEKFHGLKDPDLRYRQRYVDLIMNEDVRETFMKRTAIIKAIREFLDNRDFLEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 213 ILSPIAGGAA-AKPFITH---HNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKNFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN-VNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N++    E  N            +      
Sbjct: 269 GIDIRHNPEFTAIELYEAYADYNDMMEITENMVAYVCEKVNGTTKVMYEGTEIDFKPPWR 328

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILI 223
            IT+ +A   +A +D      +            A++ G+ +     D T  DI   +  
Sbjct: 329 RITMVDAVKEFAGVDFNEVNTD------EEAREIAKEKGLELKKELKDCTKGDILVALFE 382

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T +  YP   S L      +   T+RFE +    E+CNA  EL DPI 
Sbjct: 383 EFGEEK--LMQPTFVCDYPKENSPLTKKKRGNDALTERFEGFVYGREICNAYSELNDPIV 440

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RF ++++E++   +E Y +D+DF+  L   MP + G+ +G DRL+M +T +++I +V
Sbjct: 441 QKERFVQQLKERELGDDEAYMMDDDFINALEIGMPPTGGLGIGIDRLIMFLTDSSSIRDV 500

Query: 343 IWTPFSQSNQ 352
           I  P  +  +
Sbjct: 501 ILFPTMKPTK 510


>gi|205371965|ref|ZP_03224783.1| lysyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 498

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 172/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y   N ++E+++ 
Sbjct: 144 LRPLPEKYHGLKDVEQRYRQRYLDLITNQESRETFIARSRIIQSMRRYLDSNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F+T     + +  PL+++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHSIAGGAS-ARPFTTH---HNALDMPLFMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M+   N++   A+ V       + + +     +  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYNDIMELTENLVAHIAQEVLGTTTVPYGDYSVELAPKWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   +  +D    + +            A++ GI +     +  + +    +++
Sbjct: 320 RLHMVDAVKEHTGVDFWKEMTD------EEARALAKEHGIEIKDTMQYGHVVNEFFEQRV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+DF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 432 RFEAQLKEREEGNDEAHMMDDDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PLMRHR 497


>gi|331002786|ref|ZP_08326300.1| hypothetical protein HMPREF0491_01162 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330413275|gb|EGG92643.1| hypothetical protein HMPREF0491_01162 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 647

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 163/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I + +R++     F+E+++ 
Sbjct: 142 LKPLPEKFHGLTDTDTRYRQRYVDLIMNEDVKDTFIKRSKIITEIRKFLDGQGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F+T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 202 MLVSNAGGAA-ARPFNTHF---NALDEDVKLRISLELYLKRLIVGGMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  AEV        +     +     E
Sbjct: 258 GVDTRHNPEFTLMELYQAYTDYHGMMDLTENMFRHLAEVVCGSTTIPYAEAMIDLGKPFE 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y+ ID        +          A++ GI      T  DI +    E +
Sbjct: 318 RITMVDAIKKYSGID------FEEIETTEAAKALAKEKGIEFEERHTRGDIINLFFEEFV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P DPR+ +RFEL+    E+ NA  EL DPI+QR 
Sbjct: 372 EDK--LIQPTFVMDHPIEVSPLTKKKPRDPRYVERFELFIYGREMANAYSELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +       E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 430 RFLAQEEAFAAGDEEANHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLF 489

Query: 346 PFSQS 350
           P  +S
Sbjct: 490 PTMKS 494


>gi|295702317|ref|YP_003595392.1| lysyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294799976|gb|ADF37042.1| lysyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 494

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 99/364 (27%), Positives = 169/364 (46%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y   + ++E+++ 
Sbjct: 141 LRPLPDKYHGLKDIEQRYRQRYLDLITNPESKQTFISRSRIIQSMRRYLDNHGYLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 201 MMHSIAGGAA-ARPFVTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N+I   A+ V       + N   +   E  
Sbjct: 257 GVSTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTTKIQYGNQEVDLTPEWT 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +Y  +D         +         A++ G+ +     +  I +    +K+
Sbjct: 317 RLHMVDAIKQYTGVDFWG------ETSVEEARALAKEHGVEITEHMQYGHIVNEFFEQKV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 371 EEQ--LIQPTFIYGHPVEISPLAKKNAEDPRFTDRFELFIVAREHANAFTELNDPIDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++EK++  +E + +D+DF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 429 RFEAQLKEKEQGNDEAHEMDDDFIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 488

Query: 346 PFSQ 349
           P  +
Sbjct: 489 PHMR 492


>gi|71733658|ref|YP_276011.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|123747561|sp|Q48F26|SYK_PSE14 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71554211|gb|AAZ33422.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 500

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPDLTAADLQDVDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LKQPHFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|148549432|ref|YP_001269534.1| lysyl-tRNA synthetase [Pseudomonas putida F1]
 gi|166229819|sp|A5W890|SYK_PSEP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148513490|gb|ABQ80350.1| lysyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 500

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + S +R++ +E  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMAMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y   M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDVDRAREIAKKAGAKVLGHEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITEYPFEVSPLARRNDDNPAVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|229542254|ref|ZP_04431314.1| lysyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326674|gb|EEN92349.1| lysyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 495

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 167/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    RD    YR+R              + R+ I  S+R Y  +N ++E+++ 
Sbjct: 141 LRPLPDKFHGLRDIEQRYRQRYLDLIMSEESKNTFITRSRIIQSIRNYLDKNGYLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 201 MMHAIAGGAA-ARPFITH---HNALDIDLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M+   N+I   A+ V       +     N   E  
Sbjct: 257 GIDTRHNPEFTMLELYEAYADFNDIMQLTENMIVHTAKEVLGTTTIRYGEHEVNLEPEWR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   Y  +D        +          A++  I +     +  I +    +++
Sbjct: 317 RLHMVDAIKEYTGVDFWNVTSTEE------ARALAKEHHIEITEHMEYGHIVNEFFEQRV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 371 EEK--LIQPTFVYGHPVEISPLARKNEKDPRFTDRFELFIVGREHANAFTELNDPIDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E+++  +E + +DEDF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 429 RFVNQLKEREQGNDEAHQMDEDFIEALEYGMPPTGGLGIGVDRLVMLLTNAPSIRDVLLF 488

Query: 346 PFSQSN 351
           P  +S 
Sbjct: 489 PLMKSR 494


>gi|319648606|ref|ZP_08002820.1| lysyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|317389373|gb|EFV70186.1| lysyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 500

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 176/366 (48%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y  ++ ++E+++ 
Sbjct: 147 LRPLPDKYHGLKDIEQRYRQRYLDLIVNPESKNTFITRSKIIQSMRRYLDDHGYLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++   PG  +  R F T     + +  PLY++ + E   K+L+  G EK++     +RN 
Sbjct: 207 TMHAIPGGAS-ARPFITH---HNALDMPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M+   N+I   A+ V       + +   +   E +
Sbjct: 263 GVSTRHNPEFTMIELYEAYADYKDIMRLTENLIAHIAQEVLGTTTVQYGDYEVDLKPEWK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +              A++ GI ++   +   I +    +K+
Sbjct: 323 RLHMVDAVKEATGVDFWKEVSV------EEARAYAKEHGIEISEGMSVGHIINEFFEQKV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 377 EET--LIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +DEDF+  L   MP + G+ +G DRL+ML+T + +I +V+  
Sbjct: 435 RFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLF 494

Query: 346 PFSQSN 351
           P  +  
Sbjct: 495 PQMRHR 500


>gi|320329577|gb|EFW85566.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330878327|gb|EGH12476.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 500

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPDLTAADLQDVDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|66044559|ref|YP_234400.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75503030|sp|Q4ZWW0|SYK_PSEU2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|63255266|gb|AAY36362.1| Lysyl-tRNA synthetase, class-2 [Pseudomonas syringae pv. syringae
           B728a]
          Length = 500

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTVADLQDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|258513605|ref|YP_003189827.1| lysyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777310|gb|ACV61204.1| lysyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 499

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 103/368 (27%), Positives = 173/368 (47%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    RD    YR+R              + R+ I   +R    E  F+E+++ 
Sbjct: 144 LRPLPEKWHGLRDVELRYRQRYVDLIVNPEVKNQFVARSQIVRCIRNLLDEKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G     R F T     + +   LYL+ +PE   K+LL  G +K++     +RN 
Sbjct: 204 MMQSIAGGAA-ARPFITH---HNALDMELYLRIAPELYLKRLLVGGFDKVYEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPE 166
                H PEFTMLE Y+A+  Y  +M+    ++   +   N     S+Q    N      
Sbjct: 260 GISTKHNPEFTMLELYQAYADYYDMMEMAEYLVYNTSLRVNGTPVISYQEQEINLVPPWN 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEK 225
            + + EA  +Y+ +D      + +          AQ  G+ V    DTW ++ +++  E 
Sbjct: 320 RMPMLEAVKKYSGLDFSMLKSDQE------AVKAAQGLGLGVVQPSDTWGEVLNKVFEEM 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP   S LA     D   T RFEL+    E+ NA  EL DPI+Q+
Sbjct: 374 VEPK--LIQPTFIIDYPVEISPLAKKKDDDASLTYRFELFIYGREMANAFSELNDPIDQK 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+K++++++   +E + +DED++  L   MP + G+ +G DRLVML+T A +I ++I 
Sbjct: 432 ARFQKQVEQRRSGDDEAHMMDEDYIQALEYGMPPAGGLGIGIDRLVMLLTNAASIRDIIL 491

Query: 345 TPFSQSNQ 352
            P  +  +
Sbjct: 492 FPLLKPRE 499


>gi|330950713|gb|EGH50973.1| lysyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 500

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|138893753|ref|YP_001124206.1| lysyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134265266|gb|ABO65461.1| Lysyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 494

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 170/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R++I  S+R Y     ++E+++ 
Sbjct: 141 LRPLPEKYHGLKDVEQRYRQRYLDLTMNPQSKQTFITRSLIIQSMRRYLDSQGYLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 201 MMHAIAGGAA-ARPFITH---HNALDMTLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +MK   N+I   A  V       +     +   E  
Sbjct: 257 GISTRHNPEFTMLELYEAYADFRDIMKLTENLIAHIATEVLGTTKIQYGEHTVDLTPEWR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   Y  +D    +      D       A++ G+ +A   T+  I +    +K+
Sbjct: 317 RLHMVDAIKEYVGVDFWRHM------DDEEARALAKEHGVEIAPHMTFGHIVNEFFEQKV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 371 ESQ--LIQPTFIYGHPVEISPLAKKNPDDPRFTDRFELFIVGREHANAFTELNDPIDQRQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +DEDFL  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 429 RFEAQLKEREQGNDEAHEMDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PQMRHK 494


>gi|327438059|dbj|BAK14424.1| lysyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 497

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 161/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              ++R+ I  ++R Y   N ++E+++ 
Sbjct: 142 LRPLPDKFHGLTDVEQRYRQRYVDLMTNDESKTTFIQRSKIIRAIRNYLDNNGYLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MLHTIAGGAA-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    N+I   A+ V       +           +
Sbjct: 258 GISTRHNPEFTMIELYEAYADYNDIMDLTENLIAHVAQDVLGTTSVQYGEDTIELGVGWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +   +          A + G+ +        I +    +K+
Sbjct: 318 RVHMVDAVKEATGVDFWAPMTVEE------ARKLAAEHGVEIKDAHEVGHIINEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EET--LVQPTFVTGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANAFTELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M EK+   +E + +D DF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQMAEKEAGNDEAHEMDNDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 489

Query: 346 PFSQ 349
           P  +
Sbjct: 490 PTMR 493


>gi|172056108|ref|YP_001812568.1| lysyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171988629|gb|ACB59551.1| lysyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 497

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 100/368 (27%), Positives = 167/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ +   +R+Y     ++E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEQRYRQRYLDLITNTESRETFIARSKVIRGIRQYLDSLGYLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MLHTIAGGAS-ARPFITH---HNALDMTLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    N+I   A+ V      ++     +     +
Sbjct: 258 GISTRHNPEFTMIELYEAYADYNDIMNLTENLIAHVAQEVLGTTQVTYGEDVIDLSVGWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              +A+       +D        ++  +   +  A + G+ V    T   I +    +KI
Sbjct: 318 RAHMADLVKEATGVD------FFEEISKERAHELAHEHGVEVQAHMTTGHILNEFFEQKI 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EES--LVQPTFVYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANAFTELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK+   +E + +D DF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 430 RFEAQLVEKEAGNDEAHEMDNDFIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 489

Query: 346 PFSQSNQE 353
           P  +  Q 
Sbjct: 490 PTMRHQQN 497


>gi|289675204|ref|ZP_06496094.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 500

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|167032114|ref|YP_001667345.1| lysyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189082963|sp|B0KRL5|SYK_PSEPG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166858602|gb|ABY97009.1| lysyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 500

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + S +R++ +E  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMAMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y   M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDVDRARDIAKKAGAKVLGHEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITEYPFEVSPLARRNDDNPAVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|312959347|ref|ZP_07773864.1| lysyl-tRNA synthetase, class II [Pseudomonas fluorescens WH6]
 gi|311286064|gb|EFQ64628.1| lysyl-tRNA synthetase, class II [Pseudomonas fluorescens WH6]
          Length = 500

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 160/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMQRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTADDLNDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|330968991|gb|EGH69057.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 500

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGVDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|320323151|gb|EFW79240.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076]
          Length = 500

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPDLTAADLQDVDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDTDFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|170759400|ref|YP_001788859.1| lysyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|238688747|sp|B1KTC1|SYK_CLOBM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169406389|gb|ACA54800.1| lysine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 504

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 94/369 (25%), Positives = 162/369 (43%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  S+RE+     F+E+++ 
Sbjct: 144 LRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKSMREFLDNRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILSPIAGGAA-AKPFITH---HNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N+I     +V       ++    +      
Sbjct: 260 GIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILI 223
            +T+ +A   YA +D     D+ +          A++  I       D T  D+   +  
Sbjct: 320 RLTMVDAVKEYAGVDFNIIKDDIE------ARAIAKEKHIEFKKELKDCTKGDVLIGLFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T +  YP   S L      +  FT+RFE +    E+CNA  EL D I 
Sbjct: 374 EFCEDK--LMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNAYSELNDSIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RF ++++E++   +E Y +D+DF+  L   MP + G+ +G DRL+M +T  ++I +V
Sbjct: 432 QKERFMQQLKERELGDDEAYMMDDDFITSLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDV 491

Query: 343 IWTPFSQSN 351
           I  P  +  
Sbjct: 492 ILFPTMKPQ 500


>gi|330807739|ref|YP_004352201.1| lysyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375847|gb|AEA67197.1| lysyl-tRNA synthetase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 500

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 160/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTADDLNDIEKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|255527651|ref|ZP_05394511.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296186916|ref|ZP_06855317.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508664|gb|EET85044.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048630|gb|EFG88063.1| lysyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 502

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 92/371 (24%), Positives = 165/371 (44%), Gaps = 30/371 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  ++R +  + +++E+++ 
Sbjct: 144 LRPLPEKWHGLKDPDLRYRQRYVDLIVNQDVKDTFIKRTKIIKAIRTFLDDKEYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+  G E+++     +RN 
Sbjct: 204 ILSTIAGGAA-AKPFITH---HNALSLDMYLRIATELYLKRLIVGGFERVYEIGRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A   Y  +M+   N++     +V      ++++   +      
Sbjct: 260 GMDVRHNPEFTCMELYQAFADYNDMMELTENMVAFVCEKVLGTTKVTYEDTEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI---RVAHDDTWSDIFSRILI 223
            IT+ +A   Y  +D           D       A++  I   +   D T  DI   +  
Sbjct: 320 RITMVDAVKEYTGVDFNVI------SDDEEARGIAKEKHINMKKQLKDCTKGDILIALFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T +  YP   S L      +  FT+RFE +    E+CNA  EL DPI 
Sbjct: 374 EFCEDK--LMQPTFVCDYPVENSPLTKKKRGNAAFTERFEGFVYGREVCNAYSELNDPIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RF ++++E++   +E Y +D DF+  L   MP + G+ +G DRL+M +T  ++I +V
Sbjct: 432 QKDRFLQQLRERELGDDEAYMMDNDFINALEIGMPPTGGLGIGIDRLIMFLTNTSSIRDV 491

Query: 343 IWTPFSQSNQE 353
           I  P  +  Q+
Sbjct: 492 ILFPTMKPEQQ 502


>gi|190574184|ref|YP_001972029.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190012106|emb|CAQ45729.1| putative lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
          Length = 503

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 160/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +     F+E+++ 
Sbjct: 148 LRPLPDKWHGLADVEQRYRQRYVDLIVTPESRAVFIKRSKIIRAMRAWLDNRDFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG     + F+T     + +   LYL+ +PE   K+L   G E+++     +RN 
Sbjct: 208 MMHYIPGGAA-AKPFTTH---HNALDLDLYLRVAPELYLKRLTVGGLERVYEINRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+ +Y ++M     +IR  A+         +     +      
Sbjct: 264 GVSTRHNPEFTMMELYEAYATYNEIMDLTEGVIRDVAKAVNGGTEVEWDGAKIDLGPAFR 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  IRV     W  +   I    +
Sbjct: 324 RWRMDEAVRHH-----NPEISAADCTDRDALLRHCERLKIRVKPSYGWGKLLLEIFEATV 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DP +T RFEL+    EL N   EL DP +Q  
Sbjct: 379 EHT--LIQPTFITDHPVEVSPLARANDNDPGYTDRFELFVNGKELANGFSELNDPEDQAQ 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    D D++  L   M  + G+ +G DRLVML+TG+++I +V+  
Sbjct: 437 RFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPTGGLGIGVDRLVMLLTGSSSIRDVLLF 496

Query: 346 PFSQSNQ 352
           P+ +  Q
Sbjct: 497 PYMRPEQ 503


>gi|294496950|ref|YP_003560650.1| lysyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294346887|gb|ADE67216.1| lysyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 494

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 169/364 (46%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y   + ++E+++ 
Sbjct: 141 LRPLPDKYHGLKDIEQRYRQRYLDLITNPESKQTFISRSRIIQSMRRYLDNHGYLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 201 MMHSIAGGAA-ARPFVTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N+I   A+ V       + +   +   E  
Sbjct: 257 GVSTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTTKIQYGDQEVDLTPEWT 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +Y  +D         +         A++ G+ +     +  I +    +K+
Sbjct: 317 RLHMVDAIKQYTGVDFWG------ETSVEEARALAKEHGVEITEHMQYGHIVNEFFEQKV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 371 EEQ--LIQPTFIYGHPVEISPLAKKNAEDPRFTDRFELFIVAREHANAFTELNDPIDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++EK++  +E + +D+DF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 429 RFEAQLKEKEQGNDEAHEMDDDFIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 488

Query: 346 PFSQ 349
           P  +
Sbjct: 489 PHMR 492


>gi|21231301|ref|NP_637218.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66768647|ref|YP_243409.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|39932239|sp|Q9L3G6|SYK_XANCP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81305381|sp|Q4UU84|SYK_XANC8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|7688055|emb|CAB89697.1| putative lysyl tRNA synthetase [Xanthomonas campestris pv.
           campestris]
 gi|21112955|gb|AAM41142.1| putative lysyl tRNA synthetase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573979|gb|AAY49389.1| putative lysyl tRNA synthetase [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 505

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAIRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y ++M     +IR  A+ V      S+   + +      
Sbjct: 266 GVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQGVLGTTQVSWDGADIDLAPAFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  I+V     W  +   I    +
Sbjct: 326 RWRMDEAVRHH-----NPEISAADCTDRAALLRHCERLKIKVKPSYGWGKLLLEIFESTV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  
Sbjct: 381 EHT--LVQPTFITDHPVEVSPLARASDTEPGYTDRFELFINGKELANGFSELNDPEDQAA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K    +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 439 RFQAQVQAKDGGDDEAMHYDADYIRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLF 498

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 499 PYMRPE 504


>gi|289626067|ref|ZP_06459021.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289646234|ref|ZP_06477577.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330867550|gb|EGH02259.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330894560|gb|EGH27221.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
 gi|330985077|gb|EGH83180.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 500

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPDLTAADLQDVDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|326792441|ref|YP_004310262.1| lysyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326543205|gb|ADZ85064.1| Lysyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 509

 Score =  350 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 164/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              LKR+ I  S+R +     FIE+++ 
Sbjct: 154 LQILPEKYHGLKDTEMRYRQRYVDLIVNPEVKDTFLKRSAIIRSMRNFLDNKDFIEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 214 VLHSIAGGAA-ARPFVTH---HNALDIDMYMRIAPELKLKRLIVGGFDRVYEIGRVFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A   Y  +M     +IR   +  N   +  +  V  +      
Sbjct: 270 GMSIRHNPEFTIMELYQAFADYNDMMDITEEMIRHVCKEVNGTAVIEYDGVTIDLDKPFA 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ +A  +Y  +D           D       A++  +         DI +    E +
Sbjct: 330 RISMVDAVKQYTGVDFRAI------KDLEEARAIAKEKHVAFEEHHMKGDILNLFFEEFV 383

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +P   S L+   P DP +T+RFEL+    E  NA  EL DPI+QR 
Sbjct: 384 EEH--LIQPTFLTEHPVEISPLSKRKPLDPEYTERFELFIVGREHANAFSELNDPIDQRG 441

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+++ + +    +E   IDEDFL  L   +P + G+ +G DRLVML+T + +I +V+  
Sbjct: 442 RFKRQEELRAAGDDEACEIDEDFLTALEYGLPPTGGLGVGVDRLVMLLTNSASIRDVLLF 501

Query: 346 PFSQS 350
           P  + 
Sbjct: 502 PTMKP 506


>gi|188991535|ref|YP_001903545.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|229559863|sp|B0RSQ8|SYK_XANCB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|167733295|emb|CAP51494.1| lysyl-tRNA synthetase heat inducible [Xanthomonas campestris pv.
           campestris]
          Length = 505

 Score =  350 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAIRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y ++M     +IR  A+ V      S+   + +      
Sbjct: 266 GVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQGVLGTTQVSWDGADIDLAPAFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  I+V     W  +   I    +
Sbjct: 326 RWRMDEAVRHH-----NPEISAADCTDRAALLRHCERLKIKVKPSYGWGKLLLEIFEATV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  
Sbjct: 381 EHT--LVQPTFITDHPVEVSPLARASDTEPGYTDRFELFINGKELANGFSELNDPEDQAA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K    +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 439 RFQAQVQAKDGGDDEAMHYDADYIRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLF 498

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 499 PYMRPE 504


>gi|56961899|ref|YP_173621.1| lysyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81367474|sp|Q5WLU5|SYK_BACSK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56908133|dbj|BAD62660.1| lysyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 502

 Score =  350 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 168/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  E  F+E+++ 
Sbjct: 145 LRPLPDKYHGLKDVEQRYRQRYLDLITSPESRTAFITRSKIIQVMRRYLDEKGFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 205 MMHSIPGGAS-ARPFVTH---HNTLDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M+    +I   A+ V       +           +
Sbjct: 261 GISTRHNPEFTMIELYEAYADYHDIMELTEGVIAHIAKEVLGTTTVQYGEHTVELAPSWK 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    + + +          A++ G+ V    T+  + +      I
Sbjct: 321 RVHMVDAIKEKTGVDFWQQMSDGE------ARALAKEHGVPVKETMTFGHVVNEFFEHFI 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 375 EET--LIQPTFVYGHPLAISPLAKKNEEDPRFTDRFELFIVGREHANAFSELNDPIDQRK 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E+++  +E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +VI  
Sbjct: 433 RFEAQLIEREQGDDEAHRMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVILF 492

Query: 346 PFSQSNQE 353
           P  ++ ++
Sbjct: 493 PQMRNREQ 500


>gi|256821964|ref|YP_003145927.1| lysyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256795503|gb|ACV26159.1| lysyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 499

 Score =  350 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ +  ++R++     F+E+++ 
Sbjct: 145 LRPLPDKWSGLSDQETRYRQRYVDLIVNEESRETFIIRSKVVKAIRDFLESRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PLYL+ +PE   K+L+  G EK++     +RN 
Sbjct: 205 MMHVIPGGAS-ARPFETH---HNALDMPLYLRVAPELYLKRLVVGGLEKVYEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y  +  Y  LM     ++R   E    + +F       +      
Sbjct: 261 GLSTRHNPEFTMLEFYWGYADYNDLMDLTEAMLRHTVETVLGKTVFESSGETYDFGKPFA 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV EA  +Y        +      D       A++  I+         +   I  E  
Sbjct: 321 RMTVLEAITKY-----QPEITLEQLSDLDKARDVAKRLKIKTEKSWGLGKVQIEIFEEVA 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     DP  T RFE +A   EL N   EL D  +Q  
Sbjct: 376 EHK--LIQPTFITAYPAEVSPLARRNDEDPFVTDRFEFFAGGRELANGFSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +++ K    +E    D D++  L   +P ++G  +G DRLVML+T + +I +V+  
Sbjct: 434 RFKAQVEAKDAGDDEAMHYDADYIRALEYGLPPTAGEGIGIDRLVMLLTDSPSIRDVLLF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPE 499


>gi|77457287|ref|YP_346792.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123605817|sp|Q3KHF3|SYK_PSEPF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|77381290|gb|ABA72803.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 499

 Score =  350 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 160/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 144 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMKRDFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 204 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 260 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 320 RLSVFDSILKY-----NPELTADDLNDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 375 EHK--LEQPHFITQYPFEVSPLARRNDDNPNVTDRFELFIGGREIANAYSELNDAEDQAE 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 433 RFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 492

Query: 346 PFSQSN 351
           P  +  
Sbjct: 493 PHMRPQ 498


>gi|325278150|ref|ZP_08143659.1| lysyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324096725|gb|EGB95062.1| lysyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 500

 Score =  350 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + S +R++ +E  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMAMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y   M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFA 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDVDRARDIAKKAGAKVLGHEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITEYPFEVSPLARRNDDNPAVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|330964103|gb|EGH64363.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 500

 Score =  350 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSRVIAHIRSFLMQRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDLEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDVDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDDNPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|28868707|ref|NP_791326.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213969084|ref|ZP_03397223.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301384022|ref|ZP_07232440.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302058728|ref|ZP_07250269.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302131690|ref|ZP_07257680.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|38258314|sp|Q886S6|SYK_PSESM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28851946|gb|AAO55021.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213926082|gb|EEB59638.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|331016329|gb|EGH96385.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 500

 Score =  350 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMQRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDLEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDVDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDDNPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|194365604|ref|YP_002028214.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194348408|gb|ACF51531.1| lysyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 503

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 159/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +     F+E+++ 
Sbjct: 148 LRPLPDKWHGLADVEQRYRQRYVDLIVTPESRAVFIKRSKIIRAMRAWLDNRDFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG     + F+T     + +   LYL+ +PE   K+L   G E+++     +RN 
Sbjct: 208 MMHYIPGGAA-AKPFTTH---HNALDLDLYLRVAPELYLKRLTVGGLERVYEINRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+ +Y ++M     +IR  A          +     +      
Sbjct: 264 GVSTRHNPEFTMMELYEAYATYNEIMDLTEGVIRDVATTVNGGTEVEWDGAKIDLGPAFR 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  IRV     W  +   I    +
Sbjct: 324 RWRMDEAVRHH-----NPEISAADCTDREALLRHCERLKIRVKPSYGWGKLLLEIFEATV 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DP +T RFEL+    EL N   EL DP +Q  
Sbjct: 379 EHT--LIQPTFITDHPVEVSPLARANDNDPGYTDRFELFVNGKELANGFSELNDPEDQAQ 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    D D++  L   M  + G+ +G DRLVML+TG+++I +V+  
Sbjct: 437 RFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPTGGLGIGVDRLVMLLTGSSSIRDVLLF 496

Query: 346 PFSQSNQ 352
           P+ +  Q
Sbjct: 497 PYMRPEQ 503


>gi|187777499|ref|ZP_02993972.1| hypothetical protein CLOSPO_01074 [Clostridium sporogenes ATCC
           15579]
 gi|187774427|gb|EDU38229.1| hypothetical protein CLOSPO_01074 [Clostridium sporogenes ATCC
           15579]
          Length = 504

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 163/369 (44%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  ++RE+     F+E+++ 
Sbjct: 144 LRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKAMREFLDNRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILSPIAGGAA-AKPFITH---HNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N++     +V       ++    +      
Sbjct: 260 GIDIRHNPEFTAIELYEAYADYNDMMEITENMVAYICEKVLGTTKVQYEGTEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILI 223
            +T+ +A   YA +D  +  D+ +          A++  +       D T  D+   +  
Sbjct: 320 RLTMVDAVKEYAGVDFNSIKDDIE------ARTIAKEKHVEFKKELKDCTKGDVLIGLFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T +  YP   S L      +  FT+RFE +    E+CNA  EL D I 
Sbjct: 374 EFCEDK--LMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNAYSELNDSIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RF ++++E++   +E Y +D+DF+  L   MP + G+ +G DRL+M +T  ++I +V
Sbjct: 432 QKERFMQQLKERELGDDEAYMMDDDFITSLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDV 491

Query: 343 IWTPFSQSN 351
           I  P  +  
Sbjct: 492 ILFPTMKPQ 500


>gi|242279993|ref|YP_002992122.1| lysyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242122887|gb|ACS80583.1| lysyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 508

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 159/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +    +D    YR+R               KR +I  ++R Y     F+E+++ 
Sbjct: 146 MRPLPEKYHGLKDVETRYRQRYVDLIVTPRAREIFQKRTLIVRAIRNYLDSKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F+T     + +   LY++ +PE   K+LL  G EK++     +RN 
Sbjct: 206 MMHPIAGGAA-ARPFTTH---HNALDMQLYMRIAPELYLKRLLVGGFEKVYEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--P 165
                H PEFTMLE+Y A+ ++E LM     +I    +  N              +    
Sbjct: 262 GISVRHNPEFTMLEFYWAYANFENLMDLTEEMISSVCKEVNGDTVIDYQDERIDLTPGAW 321

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +   E+  +   +            D        ++ G +    +    + +++    
Sbjct: 322 HRMAFHESLEKVGGVSP------EVYNDYDKCKELVKKLGEKAVEGEKLGKLQAKLFDAL 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +     +  YP   S L+     +P  T RFEL+    EL NA  EL DP++QR
Sbjct: 376 VEPK--LIQPHFIYHYPTDISPLSRRNEENPDITDRFELFIYGRELANAFSELNDPVDQR 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF +++ EK    +E + +DED++  L   MP ++G  +G DRLVML+T + +I EVI 
Sbjct: 434 CRFMEQVAEKDAGDDEAHNMDEDYVRALEYGMPPAAGQGIGIDRLVMLLTDSASIREVIL 493

Query: 345 TPFSQSN 351
            P  ++ 
Sbjct: 494 FPLLRTE 500


>gi|313672325|ref|YP_004050436.1| lysyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939081|gb|ADR18273.1| lysyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 490

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 169/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D   R+R                 KR++I   +R++F    F+E+++ 
Sbjct: 133 LRDLPEKWHGLKDIEIRQRQRYVDLIVNPEVKEVFKKRSLIIKHIRDFFYNKDFLEVETP 192

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 193 MMHPIAGGAT-AKPFITH---HNTLDMKLYLRIAPELYLKRLVVGGFERVFEINRNFRNE 248

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPE 166
                H PEFTM+EWY+A+  Y  LMK    +I   A   N     +F +   N     E
Sbjct: 249 GISTKHNPEFTMIEWYQAYADYFDLMKMTEELIYEIALKINGTPIITFGDYEINLTPPWE 308

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA I        P+         +A++  I+V        I   I    +
Sbjct: 309 KLTLEQAIEKYARI------PEPELSSYEFALNKAKELNIKVEDGWGRGKIVLTIFETLV 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     +P  T+RFEL+   +E+ N  +EL DPI+Q  
Sbjct: 363 EDK--LIQPTFIIDYPKEVSPLSKSKKDNPEITERFELFIAGMEVANGFNELNDPIDQYE 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFEK+++ K+    E + +D+D++  L   +P ++G  +G DRLVML+T   +I EVI  
Sbjct: 421 RFEKQVKAKEAGDEEAHMMDKDYIRALEYGLPPTAGEGLGVDRLVMLLTDTKSIREVILF 480

Query: 346 PFSQSN 351
           P  +  
Sbjct: 481 PQLRPE 486


>gi|323491012|ref|ZP_08096206.1| lysyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395368|gb|EGA88220.1| lysyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 494

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 166/367 (45%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y     F+E+++ 
Sbjct: 140 LRPLPEKFHGLKDVEQRYRQRYLDLLTSEESKETFILRSRIIQSMRRYLDNEGFLEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 200 MLHSIAGGAA-AKPFITH---HNALDMELYIRIAIELHLKRLIVGGLEKVYEIGRVFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y  +M    N++   A+ V       +     +     +
Sbjct: 256 GISTRHNPEFTMLELYEAYADYNDIMALTENLVAHIAQEVLGTTTVQYGEDQIDLAVGWK 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + +A+A   Y  +D    +       +      A++ GI +        I +    +K+
Sbjct: 316 RLHMADAVKEYTGVDFWKHIT------KEEAQALAKEHGIEIKSTMEVGHILNEFFEQKV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 370 EEQ--LVQPTFIYGHPVEISPLAKKNPEDERFTDRFELFIVRREHANAFTELNDPIDQRQ 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DEDF+  L   +P + G+ +G DRL+ML+T +++I +V+  
Sbjct: 428 RFEAQLVEKAEGNDEAHEMDEDFIEALEYGLPPTGGLGIGIDRLIMLLTNSSSIRDVLLF 487

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 488 PQMRPKE 494


>gi|88797977|ref|ZP_01113564.1| lysyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88779174|gb|EAR10362.1| lysyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 510

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 168/369 (45%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R Y     F+E+++ 
Sbjct: 152 LRPLPDKYHGLADQEAKYRQRYVDLIINDQTRSVFEVRSKVVSGIRNYLSSRDFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + + + LYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 212 MLQVIPGGAT-ARPFITH---HNAMDRDLYLRIAPELYLKRLVVGGLERVFEINRSYRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLEWY+A+  Y  LM    +++R  A +        +Q  + +     E
Sbjct: 268 GVSTRHNPEFTMLEWYQAYADYNDLMDMTEDMLRTVAKDALGTTEIHYQGRDYDFAQPFE 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  ++        +      DR      A+  GI V        + + I  E +
Sbjct: 328 RVTMFDAILKH-----NPEVTAEQLKDRDAAAAIAKALGINVQDGWGLGKLQTEIFEETV 382

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  YPA  S LA    A+P  T RFE +    E+ N   EL DPI+Q  
Sbjct: 383 EEQ--LFGPVFITEYPAEVSPLARRNDANPDVTDRFEFFLGGREIANGFSELNDPIDQAE 440

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ EK    +E    D D++  L   +P ++G  +G DRLVM +T + +I +VI  
Sbjct: 441 RFQAQVAEKDAGDDEAMFYDADYINALEYGLPPTAGEGIGIDRLVMFLTDSPSIKDVILF 500

Query: 346 PFSQSNQEE 354
           P  +  QEE
Sbjct: 501 PHMKPKQEE 509


>gi|224475661|ref|YP_002633267.1| lysyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420268|emb|CAL27082.1| lysyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 497

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 166/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 144 LRPLPDKFHGLQDVEQRYRQRYLDLITNQESTQTFINRSKIIQEMRNYLNSKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA-AEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  +  +M      IR    +V    +  +     +  S  +
Sbjct: 260 GVSTRHNPEFTMIELYEAYADFHDIMDLTEGTIRHISKKVLGTAVVPYGEYEVDLDSPWK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      ++        D          A++ GI +    T+  I +    +K+
Sbjct: 320 RVHIVDAVKEATGVN------FFDVKSDEEARELAKEHGIEITDHMTYGHILNEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EET--LIQPTFVYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++EK++  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 432 RFEAQLKEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 491

Query: 346 PFSQ 349
           P+ +
Sbjct: 492 PYMR 495


>gi|237800111|ref|ZP_04588572.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022967|gb|EGI03024.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 500

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDLEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPDLTAADLQDVDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDDNPSVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|168830126|gb|ACA34354.1| lysyl-tRNA synthetase [Paenibacillus polymyxa]
          Length = 506

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 173/367 (47%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +    +D    YR+R              + R+ I  S+R Y     ++E+++ 
Sbjct: 152 LYPLPEKYHGLKDVELRYRQRYVDLVMNPEVQKTFITRSRIIQSMRRYLDSLGYLEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G     + F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 212 TLHSIAGGAA-AKPFVTH---HNALDMQLYMRIAIELHLKRLIVGGMEKVYEIGRVYRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M+   N++   A+ V   +   +Q    +   +  
Sbjct: 268 GISTRHNPEFTMIELYEAYADYKDIMQLTENMVAHIAQEVLGTQHIQYQGQEVDLTPQWR 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +A      +D    + N +       +  A++  + V    T+  I +    + +
Sbjct: 328 RVSMVDAVKEVTGVDFSVQMSNEE------AHRLAKEHKVSVEPHMTFGHILNAFFEQFV 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 382 EET--LIQPTFITGHPVEISPLAKKNEQDPRFTDRFELFVVAREHANAFTELNDPIDQRQ 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E++   +E + +D+DF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 440 RFEAQLLEREHGNDEAHEMDDDFIRALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 499

Query: 346 PFSQSNQ 352
           P  ++ Q
Sbjct: 500 PHMRNQQ 506


>gi|330872775|gb|EGH06924.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 500

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMQRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDLEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDVDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDDNPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|226950975|ref|YP_002806066.1| lysine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226841230|gb|ACO83896.1| lysine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 504

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 162/369 (43%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  S+RE+     F+E+++ 
Sbjct: 144 LRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKSMREFLDNRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILSPIAGGAA-AKPFITH---HNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N+I     +V       ++    +      
Sbjct: 260 GIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILI 223
            +T+ +A   YA +D     ++ +          A++  I       D T  D+   +  
Sbjct: 320 RLTMVDAVKEYAGVDFNIIKNDIE------ARTIAKEKHIEFKKELKDCTKGDVLIGLFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T +  YP   S L      +  FT+RFE +    E+CNA  EL D I 
Sbjct: 374 EFCEDK--LMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNAYSELNDSIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RF ++++E++   +E Y +D+DF+  L   MP + G+ +G DRL+M +T  ++I +V
Sbjct: 432 QKERFMQQLKERELGDDEAYMMDDDFITSLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDV 491

Query: 343 IWTPFSQSN 351
           I  P  +  
Sbjct: 492 ILFPTMKPQ 500


>gi|308066909|ref|YP_003868514.1| lysyl-tRNA synthetase (lysine--tRNA ligase) [Paenibacillus polymyxa
           E681]
 gi|305856188|gb|ADM67976.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) [Paenibacillus polymyxa
           E681]
          Length = 506

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 172/367 (46%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +    +D    YR+R              + R+ I  S+R Y     ++E+++ 
Sbjct: 152 LYPLPEKYHGLKDVELRYRQRYVDLVMNPEVQKTFITRSRIIQSMRRYLDSLGYLEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G     + F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 212 TLHSIAGGAA-AKPFITH---HNALDMQLYMRIAIELHLKRLIVGGMEKVYEIGRVYRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M+   N++   A+ V   +   +Q    +   +  
Sbjct: 268 GISTRHNPEFTMIELYEAYADYKDIMQLTENMVAHIAQEVLGTQHIQYQGQEVDLTPQWR 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +A      +D    + N         +  A++  + V    T+  I +    + +
Sbjct: 328 RVSMVDAVKEVTGVDFSVQMSN------EEAHRLAKEHKVPVEPHMTFGHILNAFFEQFV 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 382 EET--LIQPTFITGHPVEISPLAKKNEQDPRFTDRFELFVVAREHANAFTELNDPIDQRQ 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E++   +E + +D+DF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 440 RFEAQLLEREHGNDEAHEMDDDFIRALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 499

Query: 346 PFSQSNQ 352
           P  ++ Q
Sbjct: 500 PHMRNQQ 506


>gi|168183599|ref|ZP_02618263.1| lysine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796980|ref|YP_002864532.1| lysyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673242|gb|EDT85203.1| lysine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262564|gb|ACQ53597.1| lysine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 504

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 92/369 (24%), Positives = 160/369 (43%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  ++RE+     F+E+++ 
Sbjct: 144 LRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKAMREFLDNRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILSPIAGGAA-AKPFITH---HNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N+I     +V       ++    +      
Sbjct: 260 GIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILI 223
            +T+ +A   YA +D           +       A++  I       D T  D+   +  
Sbjct: 320 RLTMVDAVKEYAGVDFNII------KNDEEARTIAKEKHIEFKKELKDCTKGDVLIGLFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T +  YP   S L      +  FT+RFE +    E+CNA  EL D I 
Sbjct: 374 EFCEDK--LMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNAYSELNDSIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RF ++++E++   +E Y +D+DF+  L   MP + G+ +G DRL+M +T  ++I +V
Sbjct: 432 QKERFMQQLKERELGDDEAYMMDDDFITSLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDV 491

Query: 343 IWTPFSQSN 351
           I  P  +  
Sbjct: 492 ILFPTMKPQ 500


>gi|170723282|ref|YP_001750970.1| lysyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229559861|sp|B1JD39|SYK_PSEPW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169761285|gb|ACA74601.1| lysyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 500

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + S +R++ ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIDRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMAMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y   M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDVDRARDIAKKAGAKVLGHEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITEYPFEVSPLARRNDDNPAVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|84624383|ref|YP_451755.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|123752737|sp|Q2P1U6|SYK_XANOM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|84368323|dbj|BAE69481.1| lysyl-tRNA synthetase heat inducible [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 505

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 165/366 (45%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y ++M     +IR  A+ V      S+   + +      
Sbjct: 266 GVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  IRV     W  +   I    +
Sbjct: 326 RWRMDEAVRHH-----NPEISAADCTDRDALLRHCERLKIRVKPSYGWGKLLLEIFEATV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  
Sbjct: 381 EHT--LVQPTFITDHPVEVSPLARSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K    +E    D D++  L   MP + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 439 RFQAQVQAKDGGDDEAMHFDADYIRALEYGMPPTGGLGIGIDRLVMLLTGSTSIRDVLLF 498

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 499 PYMRPE 504


>gi|256820313|ref|YP_003141592.1| lysyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581896|gb|ACU93031.1| lysyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 562

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 103/378 (27%), Positives = 173/378 (45%), Gaps = 36/378 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR R              +KR  + +++R++F + 
Sbjct: 135 LRPLPMPKVDADGKVHDAFTDPEQRYRMRYVDLVVNPQVKEVFIKRTKLFNAMRQFFNDA 194

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ  PG  +  R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 195 GYLEVETPILQAIPGGAS-ARPFITH---HNALDIPLYMRIANELYLKRLIVGGFDGVYE 250

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M     +I   A   N     +F    
Sbjct: 251 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYHWMMDFTERLIEHCAMAVNGTTKATFGKHT 310

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    +T+ +A  ++   D+              L   AQ  GI V        + 
Sbjct: 311 VDFKAPYPRLTMTDAIKQFTGFDITA-------KTEDELRAFAQSIGIAVDEAMGKGKLI 363

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 364 DEIFGEKCEGN--FIQPTFITDYPKEMSPLTKEHRDNPDLTERFELMVCGKEIANAYSEL 421

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE++++  +K  +E   ID+DFL  L   MP +SG+ +G DRLVM +T   
Sbjct: 422 NDPIDQRERFEEQLRLSEKGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLVMFLTNNE 481

Query: 338 NINEVIWTPFSQSNQEEI 355
           +I EV++ P  +  ++E+
Sbjct: 482 SIQEVLFFPQMRPEKKEV 499


>gi|229588762|ref|YP_002870881.1| lysyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|229360628|emb|CAY47486.1| lysyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 500

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 160/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMQRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDLEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTADDLNDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDDNPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|251794120|ref|YP_003008851.1| lysyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247541746|gb|ACS98764.1| lysyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 505

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 167/369 (45%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y     ++E+++ 
Sbjct: 149 LLPLPDKYHGLKDVELRYRQRYVDLIVNPDVQQTFITRSRIIQSMRRYLDSKGYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 209 TLHSIAGGAA-ARPFITH---HNALDMQLYMRIAIELHLKRLIVGGLEKVYEIGRVYRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N+I   A+ V      S+Q    +   +  
Sbjct: 265 GISTRHNPEFTMIELYEAYADYKDIMALTENLIAHIAQEVLGTMKISYQGQEIDLTPQWR 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +       +D    + +         +  A+   + V    T+  I +       
Sbjct: 325 RVSMVDLVKEVTGVDFSVEMSD------EEAHALAKVHKVPVEPHMTFGHILNAFFETHC 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 379 EHT--LIQPTFVTGHPVAISPLAKKNPVDPRFTDRFELFVVAREHANAFTELNDPIDQRQ 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK++  +E + +D+DF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 437 RFEAQLVEKEQGNDEAHEMDDDFIRALEYGMPPTGGLGIGVDRLVMLLTDAPSIRDVLLF 496

Query: 346 PFSQSNQEE 354
           P  +    E
Sbjct: 497 PHMRERAGE 505


>gi|319891471|ref|YP_004148346.1| class II Lysyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161167|gb|ADV04710.1| class II Lysyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 495

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  E  F+E+++ 
Sbjct: 142 LRPLPDKHHGLQDIEQRYRQRYLDLITNEESTQTFINRSRILQEMRNYLNEKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-AKPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M     ++   A  V       + +   N   +  
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYKDIMSLTEELVAHIARRVLGTTSVQYGDETINLEPQWR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        +       +  A+  GI V  +  +  I +    +K+
Sbjct: 318 RLHMVDAVKEATGVD------FYEVKSDKEAHELAKAHGIEVDDNMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EET--LIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK++  +E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKEQGNDEAHEMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|227486473|ref|ZP_03916789.1| possible lysine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235654|gb|EEI85669.1| possible lysine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 637

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 165/365 (45%), Gaps = 29/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              ++R+ I S++RE+     F+E+++ 
Sbjct: 136 LQMLPEKWHGLKDPDLRYRQRYIDLIVNPEVKEVFVQRSRIISAIREFLDGRGFLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F T     + +   +YL+ + E   K+L+  G ++++     +RN 
Sbjct: 196 ILNTIAGGAT-ARPFITH---HNTLDIDMYLRIANELYLKRLIVGGFDRVYEIGRMFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PE+T +E Y+A+  YE +M+   N++   A+      +  F        +  +
Sbjct: 252 GMDATHNPEYTAMELYQAYGDYEDMMEITENMVEHVAKKVKGTTLVEFDGHEIELKAPWK 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + EA   Y+ +D        +          A++ G+ V    T  +I +    E +
Sbjct: 312 RIPMIEAVKEYSGVDFN------EIKTDEEAKAIAKEKGVEVKE--TRGEIIAEFFDEFV 363

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     D   T RFE +    E+ NA  EL D  +QR 
Sbjct: 364 EDK--LIQPTFITDYPVEISPLAKRKNDDRSLTYRFEAFVSGAEIGNAFSELNDAEDQRA 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++++++   +E   +D DF+  L   +P + G+ +G DRL+M++TG ++I +V+  
Sbjct: 422 RFEDQVRKREAGDDEAQMMDYDFVNALEVGLPPTGGLGIGIDRLIMILTGQHSIRDVLLF 481

Query: 346 PFSQS 350
           P  + 
Sbjct: 482 PTMKP 486


>gi|70728520|ref|YP_258269.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|123734892|sp|Q4KHL4|SYK_PSEF5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|68342819|gb|AAY90425.1| lysyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 500

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 160/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFA 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTADDLNDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDDNPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|58582495|ref|YP_201511.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58427089|gb|AAW76126.1| lysyl-tRNA synthetase heat inducible [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 528

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 165/366 (45%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 173 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETP 232

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 233 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 288

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y ++M     +IR  A+ V      S+   + +      
Sbjct: 289 GVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFR 348

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  IRV     W  +   I    +
Sbjct: 349 RWRMDEAVRHH-----NPEISAADCTDRDALLRHCERLKIRVKPSYGWGKLLLEIFEATV 403

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  
Sbjct: 404 EHT--LVQPTFITDHPVEVSPLARSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAA 461

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K    +E    D D++  L   MP + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 462 RFQAQVQAKDGGDDEAMHFDADYIRALEYGMPPTGGLGIGIDRLVMLLTGSTSIRDVLLF 521

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 522 PYMRPE 527


>gi|153940179|ref|YP_001392873.1| lysyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|168180988|ref|ZP_02615652.1| lysyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|170757532|ref|YP_001783159.1| lysyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|189082955|sp|A7GJB3|SYK_CLOBL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|229559856|sp|B1IGJ2|SYK_CLOBK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|152936075|gb|ABS41573.1| lysine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|169122744|gb|ACA46580.1| lysyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|182668060|gb|EDT80039.1| lysyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|295320850|gb|ADG01228.1| lysine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 504

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 162/369 (43%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  S+RE+     F+E+++ 
Sbjct: 144 LRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKSMREFLDNRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILSPIAGGAA-AKPFITH---HNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N+I     +V       ++    +      
Sbjct: 260 GIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGAEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILI 223
            +T+ +A   YA +D     ++ +          A++  I       D T  D+   +  
Sbjct: 320 RLTMVDAVKEYAGVDFNIIKNDIE------ARTIAKEKHIEFKKELKDCTKGDVLIGLFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T +  YP   S L      +  FT+RFE +    E+CNA  EL D I 
Sbjct: 374 EFCEDK--LMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNAYSELNDSIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RF ++++E++   +E Y +D+DF+  L   MP + G+ +G DRL+M +T  ++I +V
Sbjct: 432 QKERFMQQLKERELGDDEAYMMDDDFITSLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDV 491

Query: 343 IWTPFSQSN 351
           I  P  +  
Sbjct: 492 ILFPTMKPQ 500


>gi|323465359|gb|ADX77512.1| lysyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 495

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  E  F+E+++ 
Sbjct: 142 LRPLPDKHHGLQDIEQRYRQRYLDLITNEESTQTFINRSRILQEMRNYLNEKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-AKPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M     ++   A  V       + +   N   +  
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYKDIMSLTEELVAHIARRVLGTTSVQYGDETINLEPQWR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        +       +  A+  GI V  +  +  I +    +K+
Sbjct: 318 RLHMVDAVKEATGVD------FYEVKSDKEAHELAKAHGIEVDDNMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EET--LIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK++  +E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKEQGNDEAHEMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|332707653|ref|ZP_08427681.1| lysyl-tRNA synthetase, class II [Lyngbya majuscula 3L]
 gi|332353562|gb|EGJ33074.1| lysyl-tRNA synthetase, class II [Lyngbya majuscula 3L]
          Length = 572

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 162/366 (44%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +S+R Y  +  FIEI++ 
Sbjct: 155 LLPLPDKWHGLTDTEKRYRQRYVDLIVNPDVRETFRRRAKITASIRHYLNQQDFIEIETP 214

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + ++  LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 215 VLQSEAGGA-DARPFIT---YHNTLQMDLYLRIATELHLKRLIVGGFEKVYELGRVFRNE 270

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  Y Q+M    N+I  AA+ V      ++Q    +      
Sbjct: 271 GISTRHNPEFTMIEIYQAYADYNQMMVLTENLISNAAKEVLGTLTINYQGEVIDLTPPWR 330

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            +T+ E       +D           +       A+ AG+ V +D      + +    +K
Sbjct: 331 KVTMQELVKDQIGLDFDKF------TNIEQAKAAAKDAGVEVPNDCYSIGKLLNEAFEQK 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S L   + +     +RFEL+    E  N+  EL DPI+QR
Sbjct: 385 VEET--LIQPTFVLDYPVEISPLTKPHRSKSGLVERFELFIVGRETANSYSELTDPIDQR 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   K     E   +DEDFLA L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 443 QRLEAQAARKAAGDLEAQDVDEDFLAALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIA 502

Query: 345 TPFSQS 350
            P  +S
Sbjct: 503 FPLLKS 508


>gi|253576832|ref|ZP_04854157.1| lysyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843699|gb|EES71722.1| lysyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 502

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 174/367 (47%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +    +D    YR+R              +KR+ I  S+R Y     ++E+++ 
Sbjct: 148 LYPLPDKYHGLKDVELRYRQRYVDLIVNPEVQQTFIKRSQIIRSMRRYLDSLGYLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 208 TLHNIAGGAA-ARPFITH---HNALDMQLYMRIAIELHLKRLIVGGLEKVYEIGRVYRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N+I   A+ V   ++  +Q    N   +  
Sbjct: 264 GISTRHNPEFTMIELYEAYADYKDIMALTENLISHIAQEVLGTQVVHYQGHEVNLKPQWR 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +A      +D    + N         +  A++  + V    T+  I +    + +
Sbjct: 324 RVSMVDAVKEVTGVDFSVQMSN------EEAHRLAKEHNVPVEPHMTYGHILNAFFEQFV 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 378 EET--LIQPTFVYGHPVEISPLAKKNEQDPRFTDRFELFIVAREHANAFTELNDPIDQRQ 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E+++  +E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 436 RFEAQLLEREQGNDEAHEMDEDFIRALEYGMPPTGGLGIGVDRLVMLLTDSASIRDVLLF 495

Query: 346 PFSQSNQ 352
           P  +S +
Sbjct: 496 PHMRSAE 502


>gi|20808736|ref|NP_623907.1| lysyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|254478749|ref|ZP_05092118.1| lysyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|39932223|sp|Q8R7N1|SYK_THETN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|20517378|gb|AAM25511.1| Lysyl-tRNA synthetase class II [Thermoanaerobacter tengcongensis
           MB4]
 gi|214035314|gb|EEB76019.1| lysyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 499

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              LKR  I  ++RE+     F+E+++ 
Sbjct: 144 LQVLPEKWHGLKDPDLRYRQRYVDLIINPSVREVFLKRTKIIKAIREFLDNRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 VLHTIAGGAA-ARPFITH---HNALDIDMYLRIALELHLKRLIVGGFEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y A+  Y  +M+    +    AE         +Q    +     +
Sbjct: 260 GMDIRHNPEFTLLELYEAYTDYHGMMELTEQLFAYVAEKVNGSTKIIYQGTEIDLTPPWK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
            IT+ +A   Y  ID      + +          A+   + +   D    ++ + +  E 
Sbjct: 320 RITMVDAIKEYVGIDFEKVATDEE------ARKIAKDLNLELKKPDMKKGEVIALVFDEL 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E +  +   T +  YP   S LA     +P FT RFE +    E+ NA  EL DPI+Q+
Sbjct: 374 VEKH--LIQPTFVMDYPVEVSPLAKRKRDNPAFTSRFEAFIYGREVANAFSELNDPIDQK 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF +++++++    E + +DEDF+  L   MP + G+ +G DRLVM +T + +I +VI 
Sbjct: 432 ERFLEQLRQREAGDEEAHMMDEDFINALEVGMPPTGGLGIGVDRLVMFMTDSYSIRDVIL 491

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 492 FPTMKPK 498


>gi|30018348|ref|NP_829979.1| lysyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206972583|ref|ZP_03233526.1| lysyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218232500|ref|YP_002364927.1| lysyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228919027|ref|ZP_04082407.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228950625|ref|ZP_04112760.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228956518|ref|ZP_04118315.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229039982|ref|ZP_04189746.1| Lysyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229107763|ref|ZP_04237400.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229125594|ref|ZP_04254627.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229142883|ref|ZP_04271325.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229176677|ref|ZP_04304082.1| Lysyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|229188362|ref|ZP_04315411.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|296500912|ref|YP_003662612.1| lysyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|39932142|sp|Q81J70|SYK_BACCR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226737091|sp|B7HJ16|SYK_BACC4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29893888|gb|AAP07180.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206732485|gb|EDZ49664.1| lysyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218160457|gb|ACK60449.1| lysine--tRNA ligase [Bacillus cereus B4264]
 gi|228595161|gb|EEK52931.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228606844|gb|EEK64260.1| Lysyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228640595|gb|EEK96983.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228657911|gb|EEL13716.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228675736|gb|EEL30943.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228727390|gb|EEL78583.1| Lysyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228803208|gb|EEM50029.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228809100|gb|EEM55584.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228840676|gb|EEM85937.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|296321964|gb|ADH04892.1| lysyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 499

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 171/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F+T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFTTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   +++   A+         + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +Y+  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKQYSGADFWNPMSV------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|26988228|ref|NP_743653.1| lysyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|38258322|sp|Q88MS3|SYK_PSEPK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24982968|gb|AAN67117.1|AE016340_8 lysyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|313500279|gb|ADR61645.1| LysS [Pseudomonas putida BIRD-1]
          Length = 500

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + S +R++ +E  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMAMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y   M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDVDRAREIARKAGAKVLGHEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITEYPFEVSPLARRNDDNPAVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|229067841|ref|ZP_04201159.1| Lysyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228715325|gb|EEL67183.1| Lysyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 499

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 171/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F+T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFTTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   +++   A+         + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +Y+  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKQYSGADFWNPMSI------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|315223369|ref|ZP_07865228.1| lysine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314946700|gb|EFS98689.1| lysine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 562

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 103/378 (27%), Positives = 173/378 (45%), Gaps = 36/378 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR R              +KR  + +++R++F + 
Sbjct: 135 LRPLPMPKVDADGKVHDAFTDPEQRYRMRYVDLVVNPQVKEVFIKRTKLFNAMRQFFNDA 194

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ  PG  +  R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 195 GYLEVETPILQAIPGGAS-ARPFITH---HNALDIPLYMRIANELYLKRLIVGGFDGVYE 250

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M     +I   A   N     +F    
Sbjct: 251 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYHWMMDFTERLIEHCAIAVNGTTKATFGKHT 310

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    +T+ +A  ++   D+              L   AQ  GI V        + 
Sbjct: 311 VDFKAPYPRLTMTDAIKQFTGFDITG-------KTEDELRAFAQSIGIVVDEAMGKGKLI 363

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 364 DEIFGEKCEGN--FIQPTFITDYPKEMSPLTKEHRYNPDLTERFELMVCGKEIANAYSEL 421

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE++++  +K  +E   ID+DFL  L   MP +SG+ +G DRLVM +T   
Sbjct: 422 NDPIDQRERFEEQLRLSEKGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLVMFLTNNE 481

Query: 338 NINEVIWTPFSQSNQEEI 355
           +I EV++ P  +  ++E+
Sbjct: 482 SIQEVLFFPQMRPEKKEV 499


>gi|229015479|ref|ZP_04172478.1| Lysyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229021688|ref|ZP_04178271.1| Lysyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228739624|gb|EEL90037.1| Lysyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228745822|gb|EEL95825.1| Lysyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 499

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 171/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F+T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFTTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +MK   N++   A+ V       + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +++  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKQHSGADFWNPMSV------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDQDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|322807845|emb|CBZ05420.1| lysyl-tRNA synthetase (class II) [Clostridium botulinum H04402 065]
          Length = 504

 Score =  348 bits (894), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 162/369 (43%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  S+RE+     F+E+++ 
Sbjct: 144 LRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFIKRTAIIKSMREFLDNRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILSPIAGGAA-AKPFITH---HNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N+I     +V       ++    +      
Sbjct: 260 GIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGEEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILI 223
            +T+ +A   YA +D     ++ +          A++  I       D T  D+   +  
Sbjct: 320 RLTMVDAVKEYAGVDFNIIKNDIE------ARTIAKEKHIEFKKELKDCTKGDVLIGLFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T +  YP   S L      +  FT+RFE +    E+CNA  EL D I 
Sbjct: 374 EFCEDK--LMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNAYSELNDSIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RF ++++E++   +E Y +D+DF+  L   MP + G+ +G DRL+M +T  ++I +V
Sbjct: 432 QKERFMQQLKERELGDDEAYMMDDDFITSLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDV 491

Query: 343 IWTPFSQSN 351
           I  P  +  
Sbjct: 492 ILFPTMKPQ 500


>gi|229083395|ref|ZP_04215745.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228699931|gb|EEL52566.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 499

 Score =  348 bits (894), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   N+I   A +V       +     N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTENMIAHIAKQVLGTTTIQYGEQEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +Y+  D    +              A++ G+ +        I +    +K+
Sbjct: 320 RLHMVDAIKQYSGADFWNPMSV------EEARALAKEHGVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EEE--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQ 352
           P  +  Q
Sbjct: 492 PAMRHKQ 498


>gi|325922146|ref|ZP_08183936.1| lysyl-tRNA synthetase (class II) [Xanthomonas gardneri ATCC 19865]
 gi|325547381|gb|EGD18445.1| lysyl-tRNA synthetase (class II) [Xanthomonas gardneri ATCC 19865]
          Length = 505

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 162/365 (44%), Gaps = 24/365 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE Y A+ +Y ++M     +IR  A+          +      +    
Sbjct: 266 GVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVNWDGADIDLAPAFR 325

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
               +   R+ N D+       D  DR  L    ++  I+V     W  +   I    +E
Sbjct: 326 RWRMDEAVRHHNPDISAA----DCTDRAALLGHCERLKIKVKPSYGWGKLLLEIFEATVE 381

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  R
Sbjct: 382 HT--LVQPTFITDHPVEVSPLARSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAAR 439

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+ ++Q K    +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  P
Sbjct: 440 FQAQVQAKDGGDDEAMHYDADYIRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499

Query: 347 FSQSN 351
           + +  
Sbjct: 500 YMRPE 504


>gi|330896020|gb|EGH28243.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 500

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNPLDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|298529246|ref|ZP_07016649.1| lysyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510682|gb|EFI34585.1| lysyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 508

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +    +D    YR+R              L RN I   +R++     FIE+++  
Sbjct: 152 RPLPEKYHGLKDVETRYRQRYVDLIVNPSSKQIFLARNRIIRYIRDFLDARDFIEVETPM 211

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +Q  PG  T  R F+T     + +   LYL+ +PE   K+LL  G EK++     +RN  
Sbjct: 212 MQAIPGGAT-ARPFNTH---HNALDMKLYLRVAPELYLKRLLVGGFEKVYEINRNFRNEG 267

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEY 167
               H PEFTMLE+YRA+  Y  LM     +I      +      ++Q    +       
Sbjct: 268 ISTQHNPEFTMLEFYRAYVDYWDLMDFTEEMISGLCRHMTGGTQITYQGNTIDFTPPWTR 327

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I   ++      +         D  D        ++ G  V   +  + + +++    +E
Sbjct: 328 IPFFKSLEEIGGL------APEDYQDPEKAKALVKRLGENVVPGEKQAKVQAKLFDLLVE 381

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P   +     +  YP   S L+     DP  T RFEL+    E+ NA  EL DP +Q+ R
Sbjct: 382 PR--LQQPHFIYHYPTEISPLSRRNDKDPAITDRFELFIAGREIANAFSELNDPQDQKGR 439

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F++++Q+K+    E + +DED++  L   MP + G  +G DRLVML T + +I EVI  P
Sbjct: 440 FQEQVQDKEAGDVEAHYMDEDYIRALEYGMPPAGGEGIGIDRLVMLFTNSASIREVILFP 499

Query: 347 FSQSN 351
             +  
Sbjct: 500 LLRPE 504


>gi|23097543|ref|NP_691009.1| lysyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|39932206|sp|Q8EU10|SYK_OCEIH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|22775766|dbj|BAC12044.1| lysine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 493

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 172/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+REY     F+E+++ 
Sbjct: 140 LRPLPEKYHGLKDIEQRYRQRYLDLITNPDSRGTFVSRSKIIQSMREYLNGQGFLEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 200 MMHSIPGGAS-ARPFITH---HNALDIELYMRIAIELHLKRLMVGGLEKVYEIGRVFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M+   N++   A +V      ++     N   +  
Sbjct: 256 GVSTRHNPEFTMIELYEAYADYHDIMELTENLVAHIAKQVHGSTTITYGEHEINLEPKWT 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    + + +          A++ G++V    ++  + +    +K+
Sbjct: 316 RLHIVDAVKDATGVDFWKEVSDEE------ARALAKEHGVQVTESMSYGHVVNEFFEQKV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 370 EET--LIQPTFIHGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRA 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+ +  +E + +DEDFL  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 428 RFEAQVKERAEGNDEAHYMDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLF 487

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 488 PQMRTK 493


>gi|301051815|ref|YP_003790026.1| lysyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300373984|gb|ADK02888.1| lysyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 499

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   N++   A +V       + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKYIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   ++  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKEHSGADFWNPMSV------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|285018128|ref|YP_003375839.1| lysine-tRNA ligase (lysyl-tRNA synthetase) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473346|emb|CBA15851.1| probable lysine-trna ligase (lysyl-trna synthetase) protein
           [Xanthomonas albilineans]
          Length = 505

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 160/365 (43%), Gaps = 24/365 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVSPEARAVFVKRSKIIRAMRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E Y A+ +Y ++M    ++IR  A           +           
Sbjct: 266 GVSTRHNPEFTMMELYEAYATYHEVMDLTESVIRDVARDVLGTTQVHWDGVDIDLGPAFR 325

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
               +   R+        +   D  DR  L    ++  IR      W  +   I    +E
Sbjct: 326 RWRMDEAVRH----HNPQISTADCTDREALIRHCERLKIRTKPSYGWGKLLLEIFEATVE 381

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P   +   T +  +P   S LA     +P +T RFEL+    E+ N   EL DP +Q  R
Sbjct: 382 PT--LIQPTFITDHPVEVSPLARSSDTEPGYTDRFELFINGKEIANGFSELNDPEDQAAR 439

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+ ++  K+   +E    D D++  L   +P + G+ +G DRLVML+TG+ +I +V+  P
Sbjct: 440 FQAQVAAKEGGDDEAMHFDADYIRALEVGLPPTGGLGIGIDRLVMLLTGSASIRDVLLFP 499

Query: 347 FSQSN 351
           + +  
Sbjct: 500 YMRPQ 504


>gi|258510227|ref|YP_003183661.1| lysyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257476953|gb|ACV57272.1| lysyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 495

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 169/369 (45%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R +     F+E+++ 
Sbjct: 139 LRPLPEKWHGLKDVETRYRQRYLDLIVNPDVRQIFIARSRIIQEIRRFLDGQGFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L        H R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 199 TLHTVASGA-HARPFITH---HNALDMDLYLRIAIELHLKRLIVGGLERVYEIGRVYRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y+A+  +  +M    N++R AA+    +    + +   +  S  +
Sbjct: 255 GVSTRHNPEFTMLELYQAYADFHDIMDLTENMVRHAAKAVIGKLHLPYGDHVVDLESPFK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              +A+    +  +D      +            A + G+++    T+  I +    +++
Sbjct: 315 RAHIADLVLEHTGVDFRRVTSD------EEARRLAAEHGVKIEPHMTYGHILNEFFEQRV 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 369 EDK--LIQPTFVYGHPVEISPLAKKNADDPRFTDRFELFIVGREHANAFSELNDPIDQRE 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++EK+    E   +DEDFL  L   MP + G+ +G DRLVML+TG  +I +V+  
Sbjct: 427 RFLAQLREKEAGNEEAQALDEDFLTALEHGMPPTGGLGVGIDRLVMLLTGQPSIRDVLLF 486

Query: 346 PFSQSNQEE 354
           P  +  Q++
Sbjct: 487 PLMRERQDD 495


>gi|163938085|ref|YP_001642969.1| lysyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229009586|ref|ZP_04166813.1| Lysyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229053923|ref|ZP_04195358.1| Lysyl-tRNA synthetase [Bacillus cereus AH603]
 gi|229165065|ref|ZP_04292861.1| Lysyl-tRNA synthetase [Bacillus cereus AH621]
 gi|226710882|sp|A9VN90|SYK_BACWK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|163860282|gb|ABY41341.1| lysyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228618450|gb|EEK75479.1| Lysyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228721464|gb|EEL72984.1| Lysyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228751730|gb|EEM01529.1| Lysyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 499

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 172/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F+T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFTTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +MK   N++   A+ V       + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +++  D    +              A++  + + +      I +    +K+
Sbjct: 320 RLHMVDAIKQHSGADFWNPMSV------EEARELAKEHNVEIKNTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|229094798|ref|ZP_04225804.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228688666|gb|EEL42538.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 499

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 170/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSIESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F+T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFTTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +MK   N++   A+         + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +++  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKQHSGADFWNPMSV------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|73663548|ref|YP_302329.1| lysyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123761498|sp|Q49V26|SYK_STAS1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|72496063|dbj|BAE19384.1| lysyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 495

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 102/364 (28%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I   +R Y  +  F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTQTFIKRSKILQEMRNYLNQQGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA-AEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    N+IR    +V      ++     +  S+ +
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDITENMIRHISEKVLGTAKVTYGEETIDLESKWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A      +D      + D        + A++ GI +  +  +  I +    +K+
Sbjct: 318 RIHMADAVKEETGVDFFNIQSDED------AKIAAKEHGIEITDNMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EET--LIQPTFVYGHPIEISPLAKKNAEDPRFTDRFELFIVGREHGNAFTELNDPIDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK++  +E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKEQGNDEAHEMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|330975435|gb|EGH75501.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 500

 Score =  348 bits (892), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTASPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|228905873|ref|ZP_04069771.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228853813|gb|EEM98572.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 499

 Score =  348 bits (892), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 170/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F+T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFTTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +MK   N++   A+         + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +++  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKQHSGADFWNPMSV------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDQDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|56418609|ref|YP_145927.1| lysyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|261417575|ref|YP_003251257.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|297528449|ref|YP_003669724.1| lysyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|319765233|ref|YP_004130734.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|56378451|dbj|BAD74359.1| lysyl-tRNA synthetase (lysine--tRNA ligase) [Geobacillus
           kaustophilus HTA426]
 gi|261374032|gb|ACX76775.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|297251701|gb|ADI25147.1| lysyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|317110099|gb|ADU92591.1| lysyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 494

 Score =  348 bits (892), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 171/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R++I  S+R Y     ++E+++ 
Sbjct: 141 LRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFITRSLIIQSMRRYLDSRGYLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 201 MMHAVAGGAA-ARPFITH---HNALDMTLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M+   N+I   A  V       +     +   E  
Sbjct: 257 GISTRHNPEFTMLELYEAYADFRDIMELTENLIAHIATEVLGTTKIQYGEHVVDLTPEWR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   Y  +D    + +            A++ G+ VA   T+  I +    +K+
Sbjct: 317 RLHMVDAIKEYVGVDFWRQMSD------EEARELAKEHGVEVAPHMTFGHIVNEFFEQKV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 371 ESH--LIQPTFIYGHPVEISPLAKKNPDDPRFTDRFELFIVGREHANAFTELNDPIDQRQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +DEDFL  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 429 RFEAQLKEREQGNDEAHEMDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PQMRHK 494


>gi|218901279|ref|YP_002449113.1| lysyl-tRNA synthetase [Bacillus cereus AH820]
 gi|226737089|sp|B7JK84|SYK_BACC0 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|218535399|gb|ACK87797.1| lysyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 499

 Score =  348 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 170/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   N++   A +V       + +   N   +  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPKWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   ++  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKEHSGADFWNPMSV------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|225011412|ref|ZP_03701850.1| lysyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225003915|gb|EEG41887.1| lysyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 564

 Score =  348 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 104/378 (27%), Positives = 176/378 (46%), Gaps = 36/378 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              L+R+ I +++R++  E 
Sbjct: 137 LRPLPLPKTDADGNSFDEFNDPELRYRQRYVDLIVNPKVKNTFLQRSKITTAIRDFLTEK 196

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
           +++E+++  LQ  PG  T  R F T     + +  PLYL+ + E   K+L+  G E +F 
Sbjct: 197 EYLEVETPILQPIPGGAT-ARPFVTH---HNALNTPLYLRIANELYLKRLIVGGFEGVFE 252

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVN 158
           FA  +RN      H PEFT++E Y A++ Y  +M+    ++   A   +     +  +  
Sbjct: 253 FAKDFRNEGMDRTHNPEFTVMELYVAYKDYFWMMETTEELLEKIAMEVHGTPDVTVGDHQ 312

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  S    + + +A   +   D+          +   L   A++ G+ V        + 
Sbjct: 313 ISFKSPYPRVPILQAIHTHTGFDVSGM-------NEDQLRETAKKLGLEVNETMGEGKLI 365

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E +      T +  YP   S L   + ++ + T+RFEL     EL NA  EL
Sbjct: 366 DEIFGEKCEHHY--IQPTFITDYPKSMSPLTKEHRSNAKLTERFELMVNGKELANAYSEL 423

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE ++   +K  +E   ID+DFL  L   MP +SGI +G DRLVML+T  +
Sbjct: 424 NDPIDQRERFEAQLSLSEKGDDEAMFIDQDFLRALEYGMPPTSGIGIGIDRLVMLMTNNS 483

Query: 338 NINEVIWTPFSQSNQEEI 355
           +I EV++ P  +  Q+ +
Sbjct: 484 SIQEVLFFPQMKPEQKAV 501


>gi|118444238|ref|YP_877136.1| lysyl-tRNA synthetase [Clostridium novyi NT]
 gi|259511525|sp|A0PXN4|SYK_CLONN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|118134694|gb|ABK61738.1| lysyl-tRNA synthetase [Clostridium novyi NT]
          Length = 510

 Score =  348 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 160/367 (43%), Gaps = 24/367 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  ++RE+     F+E+++ 
Sbjct: 153 LKPLPEKFHGLKDPDLRYRQRYVDLIMNEDVKETFMKRTAIIKAIREFLDNRDFLEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 213 ILSPIAGGAA-ARPFITH---HNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKNFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN-VNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N++    E  N            +      
Sbjct: 269 GIDVRHNPEFTAIELYEAYADYNDMMEITENMVAYVCEKVNGTTKVMYEGTEIDFKPPWR 328

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   YA +D      + +      +    +    +   D T  DI   +  E  
Sbjct: 329 RITMVDAVKEYAGVDFNEVKTDEEA---REIAKSKELELKKELKDCTKGDILVALFEEFG 385

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L      +   T+RFE +    E+CNA  EL DPI Q+ 
Sbjct: 386 EEK--LMQPTFVCDYPKENSPLTKKKRGNDELTERFEGFVYGREICNAYSELNDPIVQKE 443

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E++   +E Y +D+DF+  L   MP + G+ +G DRL+M +T +++I +VI  
Sbjct: 444 RFMQQLKERELGDDEAYMMDDDFINALEIGMPPTGGLGIGIDRLIMFLTDSSSIRDVILF 503

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 504 PTMKPTK 510


>gi|228989284|ref|ZP_04149277.1| Lysyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|229003090|ref|ZP_04160942.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228758173|gb|EEM07366.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228770494|gb|EEM19065.1| Lysyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 497

 Score =  348 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 170/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   N+I   A +V       +     N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTENMIAHIAKQVLGTTTIQYGEQEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +Y+  D  + +              A++ G+ +        I +    +K+
Sbjct: 320 RLHMVDAIKQYSGADFWSPMSV------EEARALAKEHGVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EEK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PAMRHK 497


>gi|153952825|ref|YP_001393590.1| lysyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219853490|ref|YP_002470612.1| hypothetical protein CKR_0147 [Clostridium kluyveri NBRC 12016]
 gi|189082956|sp|A5N4L1|SYK_CLOK5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146345706|gb|EDK32242.1| LysS [Clostridium kluyveri DSM 555]
 gi|219567214|dbj|BAH05198.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 502

 Score =  348 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 165/368 (44%), Gaps = 24/368 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              LKR  +  ++RE+     +IE+++ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFLKRTAVIRAIREFLDGRDYIEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILSSIAGGAA-AKPFITH---HNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A   Y  +M+   N++     +V       +Q+   +      
Sbjct: 260 GIDVRHNPEFTAMELYEAFSDYNDMMELTENMLAYVCEKVLGTTKVIYQDTEIDFKPPWN 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  ++  +D      + +     +      +  ++   D T  DI   +  E  
Sbjct: 320 RITMVDAVKQFTKVDFNEVESDDEARKIAVEKNIELKKELK---DCTKGDILVGMFEEFC 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E        T +  YP   S L      + ++T+RFE +    E+CNA  EL DPI QR 
Sbjct: 377 EHK--FIQPTFVMDYPVEISPLTKKKRGNDKYTERFEGFIFGREVCNAYSELNDPIVQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E++   +E Y +DEDF+  L   MP + G+ +G DR++M +T + +I +VI  
Sbjct: 435 RFMQQIRERELGDDEAYMMDEDFINALEIGMPPTGGLGIGLDRIIMFLTNSYSIRDVILF 494

Query: 346 PFSQSNQE 353
           P  + +Q+
Sbjct: 495 PTMKPSQQ 502


>gi|229153855|ref|ZP_04281986.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228629659|gb|EEK86355.1| Lysyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 499

 Score =  348 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 171/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   N++   A +V       + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   ++  D    +   D          A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKEHSGADFWNPMSVED------ARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|228937379|ref|ZP_04100026.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228970265|ref|ZP_04130925.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228976835|ref|ZP_04137248.1| Lysyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228782931|gb|EEM31096.1| Lysyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228789500|gb|EEM37419.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228822337|gb|EEM68318.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326937869|gb|AEA13765.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 499

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 171/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F+T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFTTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +MK   N++   A+         + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +++  D  T +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKQHSGADFWTPMSV------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|313894590|ref|ZP_07828153.1| lysine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313440780|gb|EFR59209.1| lysine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 507

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 168/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I + +REY + + F+E+++ 
Sbjct: 141 LRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSQIVAKIREYMMRDGFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   +Y++ +PE   K+L+  G +++F     +RN 
Sbjct: 201 MMHAIPGGAA-ARPFITH---HNALDIDIYMRIAPELYLKRLIVGGMDRVFEMNRCFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   E  ++   N++   A+ V   +  ++Q    N      
Sbjct: 257 GIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEINLTPPWN 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+AE   +Y   D                   A +  +    +D    I +    + +
Sbjct: 317 RITMAEGVKKYTGEDFDAV------TTVEEARAIADRLNVEYTENDGIGKILNLCFEDYV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   TI+  +P   S LA     +P  T+RFE +    EL N   EL DPI+Q+ 
Sbjct: 371 EEN--LIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSELNDPIDQKQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E++   +E + +DEDF+  L   +P ++G+ +G DRLVM +T + +I +V+  
Sbjct: 429 RFLDQLKEREAGDDEAHRMDEDFVTALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PLMKPE 494


>gi|30260268|ref|NP_842645.1| lysyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47525330|ref|YP_016679.1| lysyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183111|ref|YP_026363.1| lysyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49481679|ref|YP_034430.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52145139|ref|YP_081689.1| lysyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65317538|ref|ZP_00390497.1| COG1190: Lysyl-tRNA synthetase (class II) [Bacillus anthracis str.
           A2012]
 gi|118475848|ref|YP_892999.1| lysyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165872546|ref|ZP_02217178.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635062|ref|ZP_02393379.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641503|ref|ZP_02399751.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170688911|ref|ZP_02880113.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707537|ref|ZP_02897990.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655622|ref|ZP_02936985.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190568953|ref|ZP_03021854.1| lysyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196036416|ref|ZP_03103813.1| lysyl-tRNA synthetase [Bacillus cereus W]
 gi|196041753|ref|ZP_03109043.1| lysine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196047399|ref|ZP_03114612.1| lysyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225862130|ref|YP_002747508.1| lysyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227812751|ref|YP_002812760.1| lysyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228912816|ref|ZP_04076464.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228925330|ref|ZP_04088427.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931579|ref|ZP_04094486.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943883|ref|ZP_04106269.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229089208|ref|ZP_04220490.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229119739|ref|ZP_04249001.1| Lysyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229182471|ref|ZP_04309723.1| Lysyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229604711|ref|YP_002864729.1| lysine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254682296|ref|ZP_05146157.1| lysyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724218|ref|ZP_05186003.1| lysyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254735479|ref|ZP_05193187.1| lysyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744619|ref|ZP_05202298.1| lysyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254756324|ref|ZP_05208353.1| lysyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254762380|ref|ZP_05214222.1| lysyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|300119172|ref|ZP_07056873.1| lysyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|39932145|sp|Q81VW3|SYK_BACAN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81397490|sp|Q6HPU0|SYK_BACHK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81689861|sp|Q63HC2|SYK_BACCZ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229793|sp|A0R8E9|SYK_BACAH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|30253589|gb|AAP24131.1| lysine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47500478|gb|AAT29154.1| lysyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177038|gb|AAT52414.1| lysyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49333235|gb|AAT63881.1| lysine--tRNA ligase (lysyl-tRNA synthetase) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|51978608|gb|AAU20158.1| lysine--tRNA ligase (lysyl-tRNA synthetase) [Bacillus cereus E33L]
 gi|118415073|gb|ABK83492.1| lysine--tRNA ligase [Bacillus thuringiensis str. Al Hakam]
 gi|164711674|gb|EDR17219.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510488|gb|EDR85886.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529536|gb|EDR92286.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170127533|gb|EDS96407.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170667135|gb|EDT17896.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080033|gb|EDT65132.1| lysyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190559877|gb|EDV13861.1| lysyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195991046|gb|EDX55017.1| lysyl-tRNA synthetase [Bacillus cereus W]
 gi|196021801|gb|EDX60495.1| lysyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196027373|gb|EDX65990.1| lysine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|225790233|gb|ACO30450.1| lysine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227006353|gb|ACP16096.1| lysine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228601051|gb|EEK58619.1| Lysyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228663764|gb|EEL19342.1| Lysyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228694171|gb|EEL47852.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228815840|gb|EEM62075.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228828131|gb|EEM73858.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834377|gb|EEM79917.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228846876|gb|EEM91880.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229269119|gb|ACQ50756.1| lysine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|298723494|gb|EFI64235.1| lysyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 499

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   N++   A +V       + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   ++  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKEHSGADFWNPMSV------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|315660315|ref|ZP_07913168.1| lysine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315494604|gb|EFU82946.1| lysine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 522

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 169 LRPLPDKFHGLQDIEQRYRQRYLDLITNKESTQTFIHRSKIIQEMRNYLNNKGFLEVETP 228

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 229 MMHQIPGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 284

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  +  +M    ++IR  A+         +     +  S   
Sbjct: 285 GVSTRHNPEFTMIELYEAYADFHDIMDLTESLIRHIAQEVFGSAKVQYNGEEIDLESSWT 344

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D      + +          A++ GI +  +  +  I +    +K+
Sbjct: 345 RLHIVDAVKEATGVDFYQVKSDEE------AKALAKEHGIEIKENMKYGHILNEFFEQKV 398

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 399 EET--LIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 456

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 457 RFEAQLVEKAQGNDEAHEMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 516

Query: 346 PFSQ 349
           P+ +
Sbjct: 517 PYMR 520


>gi|118602601|ref|YP_903816.1| lysyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|259511534|sp|A1AWN8|SYK_RUTMC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|118567540|gb|ABL02345.1| lysyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 497

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 166/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               +R+ I S +R +F  + FIE+++ 
Sbjct: 141 LRPLPEKFHGLSDQETRYRQRYVDLIMNKTSRNTFKRRSQIVSYIRNFFNNHDFIEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     ++F T     + +  P+YL+ +PE   K+L+  G +++F  +  +RN 
Sbjct: 201 MLQTIPGGAI-AKSFETH---HNALDMPMYLRIAPELYLKRLIVGGMDRVFEVSRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ +Y  LM     + R  A          +Q  + +     E
Sbjct: 257 GLSTRHNPEFTMIEFYQAYATYHDLMNLTEKLFRGIAFDVYGSANIHYQGNDFDFSKPFE 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I+V ++  +Y               ++      A++ GI+V  +     I   I    +
Sbjct: 317 CISVFDSILQY------NPNLTATNLNQDNAKKIAEKLGIQVKENWGLGKIQIEIFEATV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFEL+    E+ N   EL D   Q  
Sbjct: 371 EEK--LIQPTFITEYPTEVSPLARCNDDNPFITDRFELFIGGREIANGFSELNDAENQAE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+K+++EK    +E    D D++  L   MP ++G  +G DRLVML T + +I +V+  
Sbjct: 429 RFKKQVEEKDASDDEAMQYDADYIRALEYGMPPTAGEGIGIDRLVMLFTNSPSIRDVLLF 488

Query: 346 PFSQSN 351
           P  +S 
Sbjct: 489 PHMRSE 494


>gi|218895213|ref|YP_002443624.1| lysyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228898830|ref|ZP_04063113.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228963177|ref|ZP_04124347.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|229074138|ref|ZP_04207185.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229113753|ref|ZP_04243189.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|226737090|sp|B7ISY7|SYK_BACC2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|218541672|gb|ACK94066.1| lysyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228669750|gb|EEL25156.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228709032|gb|EEL61158.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228796562|gb|EEM44000.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228860855|gb|EEN05232.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 499

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 170/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F+T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFTTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +MK   N++   A+         + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +++  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKQHSGADFWNPMSV------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|254220959|pdb|3E9H|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysylsulfamoyl Adenosine
 gi|254220960|pdb|3E9H|B Chain B, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysylsulfamoyl Adenosine
 gi|254220961|pdb|3E9H|C Chain C, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysylsulfamoyl Adenosine
 gi|254220962|pdb|3E9H|D Chain D, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysylsulfamoyl Adenosine
 gi|254220963|pdb|3E9I|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysine Hydroxamate-Amp
 gi|254220964|pdb|3E9I|B Chain B, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysine Hydroxamate-Amp
 gi|254220965|pdb|3E9I|C Chain C, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysine Hydroxamate-Amp
 gi|254220966|pdb|3E9I|D Chain D, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With L-Lysine Hydroxamate-Amp
 gi|307568117|pdb|3A74|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With Diadenosine Tetraphosphate (Ap4a)
 gi|307568118|pdb|3A74|B Chain B, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With Diadenosine Tetraphosphate (Ap4a)
 gi|307568119|pdb|3A74|C Chain C, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With Diadenosine Tetraphosphate (Ap4a)
 gi|307568120|pdb|3A74|D Chain D, Lysyl-Trna Synthetase From Bacillus Stearothermophilus
           Complexed With Diadenosine Tetraphosphate (Ap4a)
          Length = 493

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 172/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R++I  S+R Y   + ++E+++ 
Sbjct: 140 LRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFITRSLIIQSMRRYLDSHGYLEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 200 MMHAVAGGAA-ARPFITH---HNALDMTLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +MK   N+I   A  V       +     +   E  
Sbjct: 256 GISTRHNPEFTMLELYEAYADFRDIMKLTENLIAHIATEVLGTTKIQYGEHLVDLTPEWR 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   Y  +D    + +            A++ G+ VA   T+  I +    +K+
Sbjct: 316 RLHMVDAIKEYVGVDFWRQMSD------EEARELAKEHGVEVAPHMTFGHIVNEFFEQKV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 370 EDK--LIQPTFIYGHPVEISPLAKKNPDDPRFTDRFELFIVGREHANAFTELNDPIDQRQ 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++++E+++  +E + +DEDFL  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 428 RFEEQLKEREQGNDEAHEMDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLF 487

Query: 346 PFSQSN 351
           P  +  
Sbjct: 488 PQMRHK 493


>gi|42779156|ref|NP_976403.1| lysyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206977926|ref|ZP_03238813.1| lysyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217957653|ref|YP_002336195.1| lysyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222093847|ref|YP_002527896.1| lysyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229136923|ref|ZP_04265551.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229194467|ref|ZP_04321271.1| Lysyl-tRNA synthetase [Bacillus cereus m1293]
 gi|81411375|sp|Q73FD1|SYK_BACC1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226737092|sp|B7HPY8|SYK_BACC7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|42735071|gb|AAS39011.1| lysyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206743832|gb|EDZ55252.1| lysyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217064281|gb|ACJ78531.1| lysyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221237894|gb|ACM10604.1| lysyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228589057|gb|EEK47071.1| Lysyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228646588|gb|EEL02794.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|324324067|gb|ADY19327.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 499

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   N++   A +V       + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   ++  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKEHSGADFWNPMSV------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|229131084|ref|ZP_04259997.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228652421|gb|EEL08345.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 499

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 171/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F+T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFTTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +MK   N++   A+         + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +++  D    +              A++  + + +      I +    +K+
Sbjct: 320 RLHMVDAIKQHSGADFWNPMSV------EEARELAKEHNVEIKNTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|56459930|ref|YP_155211.1| lysyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81363138|sp|Q5QYV9|SYK_IDILO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56178940|gb|AAV81662.1| Lysyl-tRNA synthetase class II [Idiomarina loihiensis L2TR]
          Length = 503

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 170/368 (46%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I   +R +  + QF+E+++ 
Sbjct: 147 LRPLPDKFHGLSDQEMRYRQRYLDLITNEESRSTFMARSKIIDYIRRFLSDRQFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R FST     + +   L+L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 207 MMQAIPGGAA-ARPFSTH---HNALDMELFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM     ++R AAE V     F+ Q V+ +     E
Sbjct: 263 GLSTRHNPEFTMLEFYWAYADYHDLMDLTEQMLRGAAESVLGSAQFTSQGVDYDFGKPFE 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV EA  +Y        +      D +     A+Q G+ V        +   I     
Sbjct: 323 RMTVLEAIVKYM-----PEVSLEQLNDMNTATEIAEQVGVSVKPSWGLGKVQIEIFETVA 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA  +  +P  T RFE +A   EL N   EL D  +Q  
Sbjct: 378 EHR--LIQPTFITAYPAEVSPLARRHDDNPFVTDRFEFFAGGRELANGFSELNDAEDQAE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++K+   +E    DED++  L   MP ++G  +G DRLVML+T + +I +V+  
Sbjct: 436 RFREQVEQKEAGDDEAMFYDEDYVTALEHGMPPTAGQGIGIDRLVMLLTDSASIRDVLLF 495

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 496 PHMRPKAD 503


>gi|229159250|ref|ZP_04287275.1| Lysyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228624265|gb|EEK81066.1| Lysyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 499

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   N++   A +V       + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   ++  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKEHSGADFWKPMSV------EEARELAKEHNVDIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|152973925|ref|YP_001373442.1| lysyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|189082695|sp|A7GJY9|SYK_BACCN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|152022677|gb|ABS20447.1| lysyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 499

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 168/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDIEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHTIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   N+I   A  V       +     N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTENMIAHIAKRVLGTTTIQYGEHEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +Y  +D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKQYCGVDFWKPMSV------EEARALAKEHDVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EEK--LIQPTFIYGHPVEISPLAKKNDEDSRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PTMRHKQD 499


>gi|298488302|ref|ZP_07006334.1| Lysyl-tRNA synthetase (class II) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157124|gb|EFH98212.1| Lysyl-tRNA synthetase (class II) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 500

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHNGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPDLTAADLQDVDKARAIAKKAGAKVFGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|228995467|ref|ZP_04155137.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228764328|gb|EEM13205.1| Lysyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 497

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 169/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   N+I   A  V       +     N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTENMIAHIAKRVLGTTTIQYGEQEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +Y+  D  + +              A++ G+ +        I +    +K+
Sbjct: 320 RLHMVDAIKQYSGADFWSPMSV------EEARALAKEHGVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EEK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PAMRHK 497


>gi|238019653|ref|ZP_04600079.1| hypothetical protein VEIDISOL_01527 [Veillonella dispar ATCC 17748]
 gi|237863694|gb|EEP64984.1| hypothetical protein VEIDISOL_01527 [Veillonella dispar ATCC 17748]
          Length = 507

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 168/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I + +REY + + F+E+++ 
Sbjct: 141 LRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSQIVAKIREYMMRDGFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   +Y++ +PE   K+L+  G +++F     +RN 
Sbjct: 201 MMHAIPGGAA-ARPFITH---HNALDIDIYMRIAPELYLKRLIVGGMDRVFEMNRCFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   E  ++   N++   A+ V   +  ++Q    N      
Sbjct: 257 GIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEINLTPPWN 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+AE   +Y   D                   A +  +    +D    I +    + +
Sbjct: 317 RITMAEGVKKYTGEDFDAV------TTVEEARAIADRLNVEYTENDGIGKILNLCFEDYV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   TI+  +P   S LA     +P  T+RFE +    EL N   EL DPI+Q+ 
Sbjct: 371 EEN--LIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSELNDPIDQKQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E++   +E + +DEDF+  L   +P ++G+ +G DRLVM +T + +I +V+  
Sbjct: 429 RFLDQLKEREAGDDEAHRMDEDFVTALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PLMKPE 494


>gi|47570201|ref|ZP_00240855.1| lysyl-tRNA synthetase [Bacillus cereus G9241]
 gi|228983332|ref|ZP_04143546.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|47553145|gb|EAL11542.1| lysyl-tRNA synthetase [Bacillus cereus G9241]
 gi|228776446|gb|EEM24798.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 499

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   N++   A +V       + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   ++  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKEHSGADFWNPMSV------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|325280339|ref|YP_004252881.1| Lysyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324312148|gb|ADY32701.1| Lysyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 573

 Score =  347 bits (890), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 166/375 (44%), Gaps = 35/375 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  + +++R +F    
Sbjct: 142 LRPLPIVKEKEGKVFDAFTDPEQRYRQRYLDLIVNPQVKEVFVKRTRMINAIRNFFNSKG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           ++E+++  LQ  PG  +  R F T     + +  PLYL+ + E   K+L+  G E ++ F
Sbjct: 202 YLEVETPVLQAIPGGAS-ARPFITH---HNALDIPLYLRIANELYLKRLIVGGFEGVYEF 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNC 159
           +  +RN      H PEFT +E Y A++ Y  +M     +I  AA   N            
Sbjct: 258 SRNFRNEGMDRTHNPEFTCMEIYVAYKDYLWMMNFTEEMIETAALAINGTTKAVIGENEI 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       + +A+A   Y   D+       ++     LY    +  I V        +  
Sbjct: 318 DFKRPFRRVRMADAIKEYTGYDI-------EKMSEEELYEACVKMEIPVDKTMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  EK E +      T +  YP   S L   +  +P  T+RFEL+    E+ NA  EL 
Sbjct: 371 EIFGEKCEGHY--IQPTFIYDYPKEMSPLTKKHRENPELTERFELFVNGKEVANAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+ +++ +++  +E   ID DF+  L   MP +SG+ +G DRL M +T + +
Sbjct: 429 DPIDQLERFQDQLKLQERGDDEAMYIDYDFVRALEYGMPPTSGMGIGIDRLCMFLTNSAS 488

Query: 339 INEVIWTPFSQSNQE 353
           I +V++ P  +  ++
Sbjct: 489 IQDVLFFPQMKPEKK 503


>gi|239908486|ref|YP_002955228.1| lysyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239798353|dbj|BAH77342.1| lysyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 510

 Score =  347 bits (890), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 103/368 (27%), Positives = 165/368 (44%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +    +D    YR+R                R  I   LR +   + F+E+++ 
Sbjct: 152 MRPLPEKYHGLKDVETRYRQRYVDLIVTPRSVEIFKARTTIIRELRAFLDSSGFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F T     + +   LY++ +PE   K+LL  G EK++     +RN 
Sbjct: 212 MMQAIPGGAT-ARPFVTH---HNALDMGLYMRIAPELYLKRLLVGGFEKVYEVGRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM E+Y A+  Y  LM     +  R A  V   +  S+Q    N      
Sbjct: 268 GVSTRHNPEFTMCEFYWAYARYTDLMDLTERLFARLAKAVTGSEAVSYQGQEINLAPGWA 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++  E+  +   ID           D        +++G +V   D    + +++    +
Sbjct: 328 RLSFHESIEKVGGIDPEIIR------DYDKAKSLVEKSGEKVLKGDKLGKVQAKLFDIFV 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +     +  YP   S L+     +P  T RFEL+    E+ NA  EL DP++QR 
Sbjct: 382 EPK--LIQPHFIYHYPTEISPLSRRNTENPEITDRFELFIAGREMANAFSELNDPVDQRQ 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++EK+   +E + +DED++  L   MP ++G  +G DRLVML+T   +I EVI  
Sbjct: 440 RFEDQVREKEAGDDEAHRMDEDYVRALEYGMPPAAGEGIGIDRLVMLLTDQASIREVILF 499

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 500 PLLRPEGQ 507


>gi|11387152|sp|Q9RHV9|SYK_BACST RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|6681368|dbj|BAA88691.1| lysyl-tRNA synthetase [Geobacillus stearothermophilus]
          Length = 494

 Score =  347 bits (890), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 173/366 (47%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R++I  S+R Y   + ++E+++ 
Sbjct: 141 LRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFITRSLIIQSMRRYLDSHGYLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 201 MMHAVAGGAA-ARPFITH---HNALDMTLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +MK   N+I   A  V       +     +   E  
Sbjct: 257 GISTRHNPEFTMLELYEAYADFRDIMKLTENLIAHIATEVLGTTKIQYGEHLVDLTPEWR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   Y  +D    + + +          A++ G+ VA   T+  I +    +K+
Sbjct: 317 RLHMVDAIKEYVGVDFWRQMSDEE------ARELAKEHGVEVAPHMTFGHIVNEFFEQKV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 371 EDK--LIQPTFIYGHPVEISPLAKKNPDDPRFTDRFELFIVGREHANAFTELNDPIDQRQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++++E+++  +E + +DEDFL  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 429 RFEEQLKEREQGNDEAHEMDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSPSIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PQMRHK 494


>gi|327481445|gb|AEA84755.1| lysyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 500

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 160/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R++  E  F+E+++ 
Sbjct: 145 LRPLPDKFHGLTDTEQRYRQRYVDLMVNEEVRETFRVRSKVIAHIRKFLAERDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +  P++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDMPMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+         + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGSTDVPYGDKVFHFGEPFA 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  ++        +   D  D       A++AG ++   +    +   I  E +
Sbjct: 321 RLSVFDSILKF-----NPEISAADLNDLEKARAIAKKAGAKLLGHEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHK--LEQPTFITEYPFEVSPLARRNDRNPNVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFHAQVADKDAGDDEAMHFDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPE 499


>gi|218437352|ref|YP_002375681.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218170080|gb|ACK68813.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 573

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 105/367 (28%), Positives = 164/367 (44%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +S+R Y  +  F+EI++ 
Sbjct: 156 LLPLPDKFHGLTDIEKRYRQRYVDLIINPEVRETFRRRAQITASIRRYLEQEGFLEIETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 216 VLQSEAGGA-DARPFIT---YHNTLEMDLYLRIATELHLKRLIVGGFEKVFEMGRIFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M    NII  AA +V      ++Q    +      
Sbjct: 272 GVSTRHNPEFTSIEIYQAYADYHDMMVLTENIITTAAKDVVGTLKITYQEEEIDLTPPWR 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            +T+ E       +DL                  A++AGI V  D      + +    +K
Sbjct: 332 RVTMHELVEEKTGLDLNKF------KTFEEARTAAKKAGIDVPEDCKTLGKLLNEAFEQK 385

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E +  +   T +  +P   S LA  + +     +RFELY    EL N+  EL DPI+QR
Sbjct: 386 VEES--LIQPTFVLDFPVEISPLAKPHRSKSGLVERFELYIVGRELANSFSELTDPIDQR 443

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E + ++K     E + +DEDFL  L   MP + G+ +G DRL+ML+T + +I +VI 
Sbjct: 444 KRLEAQAEKKAAGDLEAHGVDEDFLTALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVIA 503

Query: 345 TPFSQSN 351
            P  +S 
Sbjct: 504 FPLLKSQ 510


>gi|258424447|ref|ZP_05687326.1| lysyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845316|gb|EEV69351.1| lysyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 515

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 162 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETP 221

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 222 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 277

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A  V       +     +  S   
Sbjct: 278 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWT 337

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        +          A++ GI +     +  I +    +K+
Sbjct: 338 RLHIVDAVKEATGVD------FYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKV 391

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 392 EET--LIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKG 449

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 450 RFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 509

Query: 346 PFSQ 349
           P+ +
Sbjct: 510 PYMR 513


>gi|148266976|ref|YP_001245919.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393023|ref|YP_001315698.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151220691|ref|YP_001331513.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|253730985|ref|ZP_04865150.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253735252|ref|ZP_04869417.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257424629|ref|ZP_05601057.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257427295|ref|ZP_05603696.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257429932|ref|ZP_05606318.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257432634|ref|ZP_05608996.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257435538|ref|ZP_05611588.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257794243|ref|ZP_05643222.1| lysyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258407240|ref|ZP_05680385.1| lysyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420792|ref|ZP_05683728.1| lysyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258429634|ref|ZP_05688308.1| lysyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258446096|ref|ZP_05694257.1| lysyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448004|ref|ZP_05696134.1| lysyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258452802|ref|ZP_05700797.1| lysyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258453850|ref|ZP_05701823.1| lysyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|282895125|ref|ZP_06303345.1| lysyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282903103|ref|ZP_06310995.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282904892|ref|ZP_06312752.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282907839|ref|ZP_06315677.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910155|ref|ZP_06317961.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913345|ref|ZP_06321136.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282915835|ref|ZP_06323603.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282918298|ref|ZP_06326038.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282923049|ref|ZP_06330735.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282925592|ref|ZP_06333245.1| lysyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|283768952|ref|ZP_06341861.1| lysyl-tRNA synthetase class II [Staphylococcus aureus subsp. aureus
           H19]
 gi|283957307|ref|ZP_06374765.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500394|ref|ZP_06666246.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293509333|ref|ZP_06668049.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293515921|ref|ZP_06670611.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|297591571|ref|ZP_06950208.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|304380535|ref|ZP_07363211.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|147740045|gb|ABQ48343.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945475|gb|ABR51411.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150373491|dbj|BAF66751.1| lysyl-tRNA synthetase, class-2 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|253725297|gb|EES94026.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253726812|gb|EES95541.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257272656|gb|EEV04776.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275946|gb|EEV07414.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257279448|gb|EEV10043.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257282499|gb|EEV12632.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257285175|gb|EEV15292.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|257788215|gb|EEV26555.1| lysyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257841198|gb|EEV65647.1| lysyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843184|gb|EEV67597.1| lysyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257849693|gb|EEV73660.1| lysyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257855073|gb|EEV78015.1| lysyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858694|gb|EEV81567.1| lysyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257859488|gb|EEV82341.1| lysyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257864021|gb|EEV86776.1| lysyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|282314568|gb|EFB44955.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317864|gb|EFB48233.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282320326|gb|EFB50668.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282322816|gb|EFB53136.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282326003|gb|EFB56309.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328315|gb|EFB58590.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282332009|gb|EFB61518.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282592496|gb|EFB97508.1| lysyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282596529|gb|EFC01489.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282762543|gb|EFC02683.1| lysyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|283461133|gb|EFC08219.1| lysyl-tRNA synthetase class II [Staphylococcus aureus subsp. aureus
           H19]
 gi|283791231|gb|EFC30041.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921329|gb|EFD98387.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096354|gb|EFE26614.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467878|gb|EFF10388.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|297575440|gb|EFH94157.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|302750408|gb|ADL64585.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340939|gb|EFM06863.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312436392|gb|ADQ75463.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|320139396|gb|EFW31274.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320144173|gb|EFW35941.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 515

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 162 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETP 221

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 222 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 277

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A  V       +     +  S   
Sbjct: 278 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWT 337

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        +          A++ GI +     +  I +    +K+
Sbjct: 338 RLHIVDAVKEATGVD------FYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKV 391

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 392 EET--LIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKG 449

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 450 RFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 509

Query: 346 PFSQ 349
           P+ +
Sbjct: 510 PYMR 513


>gi|330752584|emb|CBL87530.1| lysyl-tRNA synthetase [uncultured Flavobacteria bacterium]
          Length = 567

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 109/376 (28%), Positives = 175/376 (46%), Gaps = 36/376 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR+ I +++R++  E 
Sbjct: 137 LRPLPLPKTDSEGNIYDAFNDPELRYRQRYVDLIVNPNVKETFIKRSKITTTIRDFLTEK 196

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ  PG     R F T     +     LYL+ + E   K+L+  G E +F 
Sbjct: 197 GYLEVETPILQPIPGGAA-ARPFVTH---HNAHNTKLYLRIANELYLKRLIVGGFEGVFE 252

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVN 158
           FA  +RN      H PEFT++E Y A++ Y  +M+   N++   +   ++K   SF +  
Sbjct: 253 FAKDFRNEGMDRTHNPEFTVMELYVAYKDYFWMMETTENLLESISYAIHKKTEISFGDQK 312

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N  +    + + EA  +Y  ID+        Q D   L   A +  + V        + 
Sbjct: 313 INFKAPYPRVPIFEAIKKYTGIDIS-------QMDEKELRKTAAKLNVEVDETMGEGKLI 365

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E +      T +  YP   S L   +  +   T+RFEL     EL NA  EL
Sbjct: 366 EEIFGEKCESHFV--QPTFIIDYPKSMSPLTKEHRTNKNLTERFELLVDGKELANAYSEL 423

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q++RFE ++   +K  +E   ID+DFL  L   MP +SGI +G DRLVML+T   
Sbjct: 424 NDPIDQKNRFESQLALSEKGDDEAMFIDQDFLRALEYGMPPTSGIGIGIDRLVMLMTNNT 483

Query: 338 NINEVIWTPFSQSNQE 353
           +I EV++ P  ++ QE
Sbjct: 484 SIQEVLFFPQMKAEQE 499


>gi|330752109|emb|CBL87070.1| Lysyl-tRNA synthetase [uncultured Flavobacteria bacterium]
          Length = 563

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 103/378 (27%), Positives = 173/378 (45%), Gaps = 36/378 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  I +S+REYF   
Sbjct: 137 LRPLPLPKTDSEGNTFDEFNDPELRYRQRYVDLIVNPKVKETFIKRTKITNSIREYFNAK 196

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ  PG  +  R F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 197 DYLEVETPILQPIPGGAS-ARPFMTH---HNALDIPLYLRVANELYLKRLIVGGFDGVYE 252

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVN 158
           F+  +RN      H PEFT++E Y A++ Y  +M+    ++   A +             
Sbjct: 253 FSKDFRNEGMDRTHNPEFTVMELYVAYKDYFWMMETTEALLEKVAVDSNGSSAVPVGEHT 312

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    I + +A   +  ID+          D   L   A+  GI V        + 
Sbjct: 313 IDFKAPYPRIAILKAIEIHTGIDVSNM-------DEVTLRAAAKGLGIEVDETMGVGKLI 365

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I   K E +      T +  YP   S L   + ++P+ T+RFEL     EL NA  EL
Sbjct: 366 DEIFGGKCEHHY--IQPTFITDYPKEMSPLTKEHRSNPKLTERFELIVNGKELANAYSEL 423

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q+ RF ++++  +K  +E   ID+DFL  L   MP +SGI +G DRLVML+T  +
Sbjct: 424 NDPIDQKERFGEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTSGIGIGIDRLVMLMTNNS 483

Query: 338 NINEVIWTPFSQSNQEEI 355
           +I EV++ P  +  ++ +
Sbjct: 484 SIQEVLFFPQMRPEKKAV 501


>gi|229148486|ref|ZP_04276743.1| Lysyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228635028|gb|EEK91600.1| Lysyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 499

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 170/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F+T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFTTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   +++   A+         + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +Y+  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKQYSGADFWNPMSV------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDSRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|312144280|ref|YP_003995726.1| lysyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904931|gb|ADQ15372.1| lysyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 491

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 172/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     ++D  YR+R              + R+ I   +R +  E  F+E+++ 
Sbjct: 135 LRPLPEKFHGLKDKDIRYRQRYLDLIVNPDVKETFVIRSKIIREMRNFLEEKGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  R F T     + +   LYL+ +PE   K+L+  G EK+F     +RN 
Sbjct: 195 MMHPIAGGAT-ARPFVTH---HNTLDMDLYLRIAPELYLKRLIVGGFEKVFEINRNFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y+A   Y  +M+   N+I   + +V ++ +  ++    +  +   
Sbjct: 251 GMSYKHNPEFTTLELYQAQADYHDMMELTENLIYSLSKKVLDKTVVEYEGTELDLTTPWR 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ EA   YA +D        +       Y  A   GI+     ++ ++ + I  E++
Sbjct: 311 RITMVEAVKEYAGVD------FTEIDSAAEAYELANSIGIKPEEGLSYGEVLNEIFEERV 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DPRFT RFE +    E+ NA  EL DP EQ+ 
Sbjct: 365 EEK--LIQPTFVMDYPIEVSPLAKKIADDPRFTYRFEGFIYGREIANAFSELNDPEEQKS 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFEK+++ ++    E   +D DF+  L   MP + G+ +G DRL+ML+T +++I +VI  
Sbjct: 423 RFEKQVEMREAGDEEAQMMDFDFIRALEYGMPPTGGLGIGIDRLIMLLTDSSSIRDVILF 482

Query: 346 PFSQSN 351
           P  +  
Sbjct: 483 PTMRPE 488


>gi|332970948|gb|EGK09922.1| lysine--tRNA ligase [Desmospora sp. 8437]
          Length = 499

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 161/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D   R R                + R+ I S++R Y     ++E+++ 
Sbjct: 145 LRPLPEKFHGLKDVELRYRKRYLDLIMNPEVKNTFITRSRIISTIRRYLDGRGYLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L   PG     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 205 TLHNIPGGAA-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGIEKVYEIGRVYRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A   +  +M     +I   A  V       +            
Sbjct: 261 GISTRHNPEFTMLELYEAFADFHDIMDLTEQLITHVAREVLGSDTLRYGEHTVELGKPWA 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +    +  ID    + +            A++ G+ +    T+  I +    +K+
Sbjct: 321 RKHMVDLVKEHTGIDFWQGVSD------EEARSLAREYGVELKPGMTFGHIVNEFFEQKV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DP++QR 
Sbjct: 375 EEK--LIQPTFVYGHPVEISPLARKNEKDPRFTDRFELFIVGREHANAFTELNDPLDQRE 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++EK +  +E +P+DEDFL  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 433 RFEAQVREKSQGNDEAHPMDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTLR 496


>gi|297207380|ref|ZP_06923819.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300910339|ref|ZP_07127792.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|296887943|gb|EFH26837.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300888328|gb|EFK83515.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 515

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 162 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETP 221

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 222 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 277

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A  V       +     +  S   
Sbjct: 278 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWT 337

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        +          A++ GI +     +  I +    +K+
Sbjct: 338 RLHIVDAVKEATGVD------FYEVKSDDEAKALAKEHGIEIKDTMKYGHILNEFFEQKV 391

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 392 EET--LIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKG 449

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 450 RFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 509

Query: 346 PFSQ 349
           P+ +
Sbjct: 510 PYMR 513


>gi|158522857|ref|YP_001530727.1| lysyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158511683|gb|ABW68650.1| lysyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 484

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 170/367 (46%), Gaps = 28/367 (7%)

Query: 2   HQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     + +  YR+R              ++R+    ++R + +E  F+E+++  
Sbjct: 125 RPLPEKFHGLKDPEKRYRKRYLDLIMNSATRDVFIRRSRAIQAIRTFLLERDFLEVETPM 184

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +Q  PG     R F T     + +   L+L+ +PE   K+L+  G E++F     +RN  
Sbjct: 185 MQPIPGGA-EARPFVTH---HNALDMDLFLRIAPELYLKRLVVGGFERVFEINRNFRNEG 240

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEY 167
               H PEFTMLE+Y+A+  Y+ LM    ++    AE     +   +Q    +       
Sbjct: 241 ISTRHNPEFTMLEFYQAYADYQGLMAMTEDLFCHVAEAVTGSRQVVYQAHTIDFSGPWPR 300

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEKI 226
           + + EA  R   +D G         DR  L   A   G+++A  D +   + +++    +
Sbjct: 301 VPLLEALQRIGGVDAGI------LNDREALLAHAAARGVQIARTDTSTGKVITKLFDALV 354

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP+  +   T +  YP   S L+      P F  RFEL+    E+ N   EL DP EQR 
Sbjct: 355 EPH--LIQPTFITGYPVEVSPLSKASAQAPGFVDRFELFIAGNEIANGFSELNDPEEQRQ 412

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  +K   +E + +DED++  L   MP ++G  +G DRLVML+T A +I EVI  
Sbjct: 413 RFAAQVAARKAGDDEAHFMDEDYIEALEYGMPPTAGEGIGIDRLVMLLTDAPSIREVILF 472

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 473 PHMRREE 479


>gi|28209978|ref|NP_780922.1| lysyl-tRNA synthetase [Clostridium tetani E88]
 gi|39932178|sp|Q899G7|SYK_CLOTE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28202413|gb|AAO34859.1| lysyl-tRNA synthetase [Clostridium tetani E88]
          Length = 502

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 169/365 (46%), Gaps = 24/365 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I   +RE+     +IE+++ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQRYVDLIVNEDVRDTFMKRTKIIKYMREFLDAKDYIEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F+T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 VLSPIAGGAA-ARPFTTH---HNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M+   N++   A +V       ++          +
Sbjct: 260 GIDIRHNPEFTMIELYEAYADYNDMMEITENMVAYIAEKVCGNTKVKYEETEIEFRPPWK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ ++   Y+ +D      + +  +         +  +    D T +DI +    E +
Sbjct: 320 RITMVDSVKEYSGVDFNEIKTDEEARELVKGKDFELKKKLE---DCTKADILNLFFEEYV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   T +  YP   S L+     +P +T+RFE +    ELCNA  EL DPI Q+ 
Sbjct: 377 EKN--LIQPTFVCDYPVEISPLSKKKNDNPEYTERFEGFVYGRELCNAYTELNDPIVQKE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E++   +E + +DEDF+  L   MP + G+ +G DRLVM +T +++I +VI  
Sbjct: 435 RFIQQLKERELGDDEAFMMDEDFINALEIGMPPTGGLGIGVDRLVMFLTDSHSIRDVILF 494

Query: 346 PFSQS 350
           P  + 
Sbjct: 495 PTMKP 499


>gi|229027923|ref|ZP_04184078.1| Lysyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|229170927|ref|ZP_04298530.1| Lysyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228612593|gb|EEK69812.1| Lysyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228733437|gb|EEL84264.1| Lysyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 499

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   N++   A +V       + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   ++  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKEHSGADFWNPMSV------EEARELAKEHNVGIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 492 PAMRHKQD 499


>gi|49482744|ref|YP_039968.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|295427052|ref|ZP_06819689.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|56749426|sp|Q6GJF4|SYK_STAAR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|49240873|emb|CAG39540.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|295129055|gb|EFG58684.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
          Length = 495

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A  V       +     +  S   
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWT 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        +          A++ GI +     +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVD------FYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 372 EET--LIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKG 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLAEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|303248492|ref|ZP_07334750.1| lysyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302490112|gb|EFL50032.1| lysyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 529

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 157/366 (42%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +    +D    YR+R                R  I   LR +     F+E+++ 
Sbjct: 171 MRPLPEKYHGLKDVETRYRQRYVDLIVTPKAVEIFKARTKIVRELRAFLDTAGFMEVETP 230

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   LY++ +PE   K+LL  G E+++     +RN 
Sbjct: 231 MMQAIPGGAT-AKPFITH---HNALDMSLYMRIAPELYLKRLLVGGFERVYEVGRNFRNE 286

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM E+Y A   Y  LM     +    A          +Q    +      
Sbjct: 287 GISTRHNPEFTMCEFYWAFARYNDLMDLTERLFGHIARAVTGSDAVEYQGQTIHLGPGWA 346

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +   E+      ID           D        +++G +V   +    + +++    +
Sbjct: 347 RVPFHESLQTIGGIDPAV------YNDFDAAKALVEKSGEKVLKGEKLGKVQAKLFDIFV 400

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +     +  YP   S L+     DP  T RFEL+    E+ NA  EL DP++QR 
Sbjct: 401 EPK--LIEPHFIYHYPTEISPLSRRNTDDPTITDRFELFIAGREMANAFSELNDPVDQRQ 458

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++++EK+   +E + +D+D++  L   MP ++G  +G DRLVML+T   +I EVI  
Sbjct: 459 RFEEQVREKEAGDDEAHRMDDDYVRALEYGMPPAAGEGIGIDRLVMLLTDQASIREVILF 518

Query: 346 PFSQSN 351
           P  +  
Sbjct: 519 PLLRPE 524


>gi|315652679|ref|ZP_07905654.1| lysine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485057|gb|EFU75464.1| lysine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 496

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I + +R++     FIE+++ 
Sbjct: 142 LKPLPEKFHGLTDTDTRYRQRYVDLIMNEDVKDTFVKRSRIITEIRKFLDGQGFIEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F+T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 202 MLVSNAGGAA-ARPFNTHY---NALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V       +     +     E
Sbjct: 258 GVDTRHNPEFTLMELYQAYTDYHGMMDLTENMFRYLAQTVCGSTTIPYAEAMIDLGKPFE 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ EA  +Y+ +D        +          A++  I      T  DI +    E +
Sbjct: 318 RTTMVEAIKKYSGVDFDKVETTKE------AKALAKEKKIEFEERHTRGDIINLFFEEFV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P DPR+ +RFEL+    E+ NA  EL DPI+QR 
Sbjct: 372 EEK--LIQPTFVMDHPIEVSPLTKKKPGDPRYVERFELFIYGREMANAYSELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +         E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 430 RFKAQEAAFAAGDEEANHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLF 489

Query: 346 PFSQS 350
           P  +S
Sbjct: 490 PTLKS 494


>gi|16330075|ref|NP_440803.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501021|sp|P73443|SYK_SYNY3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1652562|dbj|BAA17483.1| lysyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 510

 Score =  347 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 165/368 (44%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +++R Y  +  FIEI++ 
Sbjct: 150 LLPLPDKWHGLTDTEKRYRQRYVDLIVNPTVRQTFRRRAQITAAIRRYLDKQGFIEIETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 210 VLQGESGGA-EARPFITH---HNTLGMPLYLRIATELHLKRLVVGGFEKVFELGRIFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y ++M     ++  AA+        ++Q    +     +
Sbjct: 266 GVSTRHNPEFTSIEVYQAYVDYNEMMALTEALVTTAAQAVLGTLKITYQGEEIDLTPPWK 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            IT+ EA      ID           D       A +AGI V  D      + +    +K
Sbjct: 326 RITMHEAVQLETGIDFSQF------TDLETAKQAATKAGIGVPEDCPSLGHLLNHAFEQK 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA  + + P   +RFEL+    EL N+  EL DPI+QR
Sbjct: 380 VEGT--LMQPTFIIDFPVEISPLAKPHRSKPGLVERFELFVYGRELANSFSELTDPIDQR 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +  +K     E + +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 438 SRLEAQAAKKAAGDLEAHSVDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 497

Query: 345 TPFSQSNQ 352
            P  ++ +
Sbjct: 498 FPLLKNQE 505


>gi|288554692|ref|YP_003426627.1| lysyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288545852|gb|ADC49735.1| lysyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 499

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 171/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y     F+E+++ 
Sbjct: 142 LRPLPDKFHGLKDIEQRYRQRYVDLIMNPEVRDTFVLRSKILQSMRRYLDNRGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 TMHSIAGGAS-ARPFVTH---HNALDMTLYMRIAIELHLKRLIVGGMEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M+    ++   A  V      ++     +   +  
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYQDIMELTEELVAHIAREVLGTTKVTYGEYEVDLEPKWT 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A    + +D    + +            A++  + V    T+  + +      +
Sbjct: 318 RVHMVDAIKEKSGVDFWPEMTD------EEARALAKEHKVPVKETMTYGHVVNEFFEHFV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EES--LIQPTFIYGHPTAISPLAKKNPEDERFTDRFELFIVGREHANAFSELNDPIDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE+++ E+++  +E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEQQLVEREQGDDEAHMMDEDFVESLEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 489

Query: 346 PFSQSNQE 353
           P  ++ ++
Sbjct: 490 PQMRNREQ 497


>gi|166365564|ref|YP_001657837.1| lysyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166087937|dbj|BAG02645.1| lysyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 573

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 107/371 (28%), Positives = 166/371 (44%), Gaps = 28/371 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +++R Y  +  FIEI++ 
Sbjct: 156 LLPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRQTFRRRAQITAAIRRYLDQEGFIEIETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 216 VLQSEAGGA-DARPFIT---YHNTLEMELYLRIATELHLKRLIVGGFEKVFELGRIFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M+   NII  AA+ V      ++Q+   +      
Sbjct: 272 GVSTKHNPEFTSIEIYQAYADYYDMMELTENIIVNAAQDVLGTLKITYQDREIDLTPPWR 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            +T+ E       +DL +        D     + A+ AGI V  D      + +    +K
Sbjct: 332 RVTMHELVQEITGVDLNSF------EDFESARIAAENAGIGVPEDCKTIGKLLNEAFEQK 385

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA  + +     +RFELY    EL N+  EL DPI+QR
Sbjct: 386 VEET--LIQPTFVLDFPVEISPLAKPHRSKTDLVERFELYVVGRELANSFSELTDPIDQR 443

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +  +K     E   +DEDFL  L   MP + G+ +G DRL+ML+T + +I +VI 
Sbjct: 444 QRLEAQALKKAAGDLEAQGVDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIA 503

Query: 345 TPFSQSNQEEI 355
            P  +S    I
Sbjct: 504 FPLLKSQSTAI 514


>gi|119511071|ref|ZP_01630191.1| lysyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119464322|gb|EAW45239.1| lysyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 467

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 156/367 (42%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I + +R Y  E  F+EI++ 
Sbjct: 50  LLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLTERDFLEIETP 109

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 110 VLQSEAGGA-DARPFVT---YHNTLDMQLYLRIATELHLKRLIVGGFEKVFELGRIFRNE 165

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II   A+ V      ++Q    +  +   
Sbjct: 166 GVSTRHNPEFTSIEVYQAYADYHDMMALTEGIITTVAQEVLGTLQITYQGTPIDLSAPWR 225

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
            +T+ +    Y  +D  +                ++ AG+    D  +   + +    +K
Sbjct: 226 RVTMHDLVKEYTGLDFNSFST------LEEAKAASKNAGLHGIEDVPSMGKLLNAAFEQK 279

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           IE N  +   T +  YP   S LA  + + P   +RFEL+    E  N+  EL DP++QR
Sbjct: 280 IEEN--LIQPTFVIDYPVEISPLAKPHRSQPGLVERFELFIVGRETANSFSELTDPVDQR 337

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   K     E   +DEDF+  L   MP + G+ +G DRLVML+T   +I + I 
Sbjct: 338 ERLEAQAALKAAGDLEAQGVDEDFITALEYGMPPTGGLGIGIDRLVMLLTDCASIRDAIA 397

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 398 FPLLKPE 404


>gi|241667456|ref|ZP_04755034.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254876004|ref|ZP_05248714.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842025|gb|EET20439.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 560

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 163/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R YF +  F+E+++ 
Sbjct: 206 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDKLDFMEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 266 MMHVLQGGAA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   +I  +     N   + E
Sbjct: 322 GVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYE 381

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 382 RISMVDSIVKY-----NDDITKEDLATFESAKALAEKLKIKVEAYHELGHLINEIFEETV 436

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 437 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFVGAREIANGFSELNDAEDQAE 494

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 495 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 554

Query: 346 PFSQSN 351
           P  +  
Sbjct: 555 PHMKPE 560


>gi|269469084|gb|EEZ80637.1| lysyl-tRNA synthetase, class II [uncultured SUP05 cluster
           bacterium]
          Length = 496

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 165/368 (44%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               +R+ I + +R +F E+ FIE+++ 
Sbjct: 141 LRPLPEKFHGLADQEIRYRQRYVDLIVSEDSRNVFKRRSQIVAYIRNFFNESDFIEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  + F T     + +   +YL+ +PE   K+L+  G +K+F     +RN 
Sbjct: 201 MLQTIPGGAT-AKPFETH---HNALDIGMYLRIAPELYLKRLIVGGMDKVFEINRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ +Y  LM     + R  A +V       +Q  + +     +
Sbjct: 257 GLSTRHNPEFTMIEFYQAYATYHDLMDLTEQLFRGIAVDVCGNSSIHYQGDDFDFSKSFD 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I+V ++  +Y           PD          A++ GI+V  +         I    +
Sbjct: 317 RISVFDSILKY------NPKLIPDNLSEANARATAEKLGIQVKDNWGLGKTQIEIFEATV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 371 EEK--LIQPTFITEYPTEVSPLARRNDNNPFITDRFELFIGGREIANGFSELNDAEDQAT 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ EK    +E    D D++  L   MP ++G  +G DRLVML T + +I +V+  
Sbjct: 429 RFKAQVAEKDAGDDEAMHYDADYIRALEYGMPPTAGEGIGIDRLVMLFTDSPSIRDVLLF 488

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 489 PHMRPEVK 496


>gi|229077367|ref|ZP_04210034.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228705946|gb|EEL58265.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 499

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 170/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F+T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 204 MMHAIAGGAS-ARPFTTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +MK   +++   A+         + +   N   E  
Sbjct: 260 GVSTRHNPEFTMIELYEAYADYKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEINLEPEWT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +Y+  D    +              A++  + +        I +    +K+
Sbjct: 320 RLHMVDAIKQYSGADFWNPMSI------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P     Q+
Sbjct: 492 PAMHHKQD 499


>gi|294624918|ref|ZP_06703573.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292600797|gb|EFF44879.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 505

 Score =  346 bits (887), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y Q+M     +IR  A+ V      S+   + +      
Sbjct: 266 GVSTRHNPEFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  IRV     W  +   I    +
Sbjct: 326 RWRMDEAVRHH-----NPEISAADCTDREALLRHCERLKIRVKPSYGWGKLLLEIFEATV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  
Sbjct: 381 EHT--LVQPTFITDHPVEVSPLARSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K    +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 439 RFQAQVQAKDGGDDEAMHFDADYIRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLF 498

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 499 PYMRPE 504


>gi|269797573|ref|YP_003311473.1| lysyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094202|gb|ACZ24193.1| lysyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 506

 Score =  346 bits (887), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 168/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I + +REY + + F+E+++ 
Sbjct: 141 LRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSQIVAKIREYMMRDGFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   +Y++ +PE   K+L+  G +++F     +RN 
Sbjct: 201 MMHAIPGGAA-ARPFITH---HNALDIDIYMRIAPELYLKRLIVGGMDRVFEMNRCFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   E  ++   N++   A+ V   +  ++Q    N      
Sbjct: 257 GIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEINLTPPWN 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+AE   +Y   D                   A +  +    +D    I +    + +
Sbjct: 317 RITMAEGVKKYTGEDFDAV------TTVEEARAIADRLNVEYTENDGIGKILNLCFEDYV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   TI+  +P   S LA     +P  T+RFE +    EL N   EL DPI+Q+ 
Sbjct: 371 EEN--LIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSELNDPIDQKQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E++   +E + +DEDF+  L   +P ++G+ +G DRLVM +T + +I +V+  
Sbjct: 429 RFLDQLKEREAGDDEAHRMDEDFVTALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PLMKPE 494


>gi|304405774|ref|ZP_07387432.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304345017|gb|EFM10853.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 505

 Score =  346 bits (887), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 167/369 (45%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y     ++E+++ 
Sbjct: 149 LLPLPDKHHGLKDVELRYRQRYVDLITNPDVQQTFIARSRIIQSMRRYLDSLGYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 209 TLHAIAGGAS-ARPFITH---HNALDMQLYMRIAIELHLKRLIVGGLEKVYEIGRVYRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N+++  A+ V    +  +Q    +  +   
Sbjct: 265 GISTRHNPEFTMIELYEAYADYKDIMALTENLVKHIAQEVLGTTVIDYQGSEVDLGTPWR 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +       +D    + N +       +  A+Q  + V        I +    +  
Sbjct: 325 RVSMVDLVKEATGVDFAAQISNEE------AHEAARQHKVPVEKHWAAGHILNAFFEQFC 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 379 EHT--LIQPTFVTGHPVDISPLAKKNEQDPRFTDRFELFIVAREHANAFTELNDPIDQRE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E++   +E + +D+DF+  L   MP + G+ +G DRLVML+T   +I +V+  
Sbjct: 437 RFEAQLLEREHGNDEAHEMDDDFIRALEYGMPPTGGLGIGIDRLVMLLTNQPSIRDVLLF 496

Query: 346 PFSQSNQEE 354
           P  +    E
Sbjct: 497 PHMRHRAGE 505


>gi|302037376|ref|YP_003797698.1| lysyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300605440|emb|CBK41773.1| Lysyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 493

 Score =  346 bits (887), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 166/367 (45%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ I S +R + +E  F+E+++ 
Sbjct: 139 LRPLPEKWHGLTDVETRYRQRYVDLIANPQVHQIFALRSRIVSGIRAFLIERGFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 199 MMHPIPGGAA-AKPFVTH---HNALGAELYLRIAPELYLKRLIVGGFPRVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
               +H PEFTMLE+Y ++  Y  L+     +  R A ++       +Q  + N  S   
Sbjct: 255 GISTIHNPEFTMLEFYVSYADYHDLIVLTEELFGRLAQDILGTTTIDYQGTHINLGSPWR 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             +  ++     ++            +R      AQ+ G+ V+  ++  +I + I  E +
Sbjct: 315 RWSYHQSILEVNSLPPSV------LTNRDEALAAAQRLGVEVSPKESLVNILNEIFEETV 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  YP   S LA    +DP  T RFELY    E+ NA  EL DP++QR 
Sbjct: 369 EPR--LQQPTFITDYPIEISPLARRKDSDPSLTDRFELYIAGREIANAFSELNDPLDQRE 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  +      E + +DEDFL  L   MP ++G  +G DRLVML T  ++I +V+  
Sbjct: 427 RFEAQAAKHAAGDEEAHRVDEDFLRALEYGMPPTAGEGIGIDRLVMLFTNQSSIRDVVLF 486

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 487 PQLRPEK 493


>gi|227112637|ref|ZP_03826293.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 505

 Score =  346 bits (887), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + +++R + V++ F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFRIRSKVMAAIRSFMVDHGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+    N+ R    +V       + +   +     E
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGSTTVQYGDQTFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       AQ  GI++        I + I  E  
Sbjct: 326 KLTMREAICKY-----RPETNVADLDDLEKATAIAQSLGIKIEKSWGLGRIVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESS--LIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFAQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PTMRPQK 505


>gi|298693848|gb|ADI97070.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 495

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A  V       +     +  S   
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWT 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        +          A++ GI +     +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVD------FYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 372 EET--LIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKG 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|227499307|ref|ZP_03929419.1| possible lysine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227218658|gb|EEI83892.1| possible lysine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 632

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 166/369 (44%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              ++R++I S +R +     F+E+++ 
Sbjct: 135 LQMLPEKWHGLKDQDLRYRQRYLDLIVNPEVKDVFVQRSLIISEIRRFLDGKGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F T     + +   +YL+ + E   K+L+  G +K++     +RN 
Sbjct: 195 ILNTIAGGAT-ARPFITH---HNSLDIGMYLRIASELYLKRLIVGGFDKVYEIGRMFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +E +M+    ++   A+    + +           +  +
Sbjct: 251 GMDATHNPEFTTMELYQAYADFEDMMEITETMVEAVAQKVKGKTLVELDGNEIELKAPWK 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ EA   Y+ +D        +  D       A++  + V    +  +I +    E +
Sbjct: 311 RISMIEAVKEYSGVDFN------EITDYEAAVEIAKEKNVEVK--GSRGEIIAEFFDEFV 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFE +    E+ NA  EL D ++Q+ 
Sbjct: 363 EDK--LIQPTFIIDYPVEISPLAKRKNDDPSLTYRFEAFINGAEIANAFSELNDALDQKQ 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +++   +E   +D DF+  L   MP + G+ +G DRL+M++TG ++I +V+  
Sbjct: 421 RFLDQVAKREAGDDEAQMMDYDFVNALEIGMPPTGGLGIGIDRLIMILTGQHSIRDVLLF 480

Query: 346 PFSQSNQEE 354
           P  +   +E
Sbjct: 481 PTMKPIGKE 489


>gi|89100492|ref|ZP_01173353.1| lysyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084758|gb|EAR63898.1| lysyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 496

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 168/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y   + ++E+++ 
Sbjct: 143 LRPLPEKFHGLKDVEQRYRQRYLDLIMSQESKKTFITRSRIIQSMRRYLDSHGYLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 203 MMHSIAGGAS-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    N++   AE V       + +   N   E  
Sbjct: 259 GVSTRHNPEFTMIELYEAYADYRDIMSLTENLVAHIAEEVLGTTTVQYGDYEVNLKPEWT 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   +  +D    +       +      A++  + +     +  I +    +K+
Sbjct: 319 RLHMVDAIKEHTGVDFWKQMS------KEEAQALAKEHNVEIKETMEYGHIVNEFFEQKV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 373 EEK--LIQPTFIYGHPVEISPLAKKNEEDPRFTDRFELFIVAREHANAFTELNDPIDQRE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+DF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 431 RFEAQLKEREQGNDEAHMMDDDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 490

Query: 346 PFSQSN 351
           P  +  
Sbjct: 491 PLMRHR 496


>gi|258406354|ref|YP_003199096.1| lysyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798581|gb|ACV69518.1| lysyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 504

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 103/368 (27%), Positives = 163/368 (44%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +    +D    YR+R              +KR  I   LR +     F+E+++ 
Sbjct: 147 MRPLPEKYHGLKDVETRYRQRYVDLIVTPQARDIFVKRTRIVQGLRHFLDNRGFMEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q+ PG  T  R F T     + +   LYL+ +PE   K+LL  G E+++     +RN 
Sbjct: 207 MMQHIPGGAT-ARPFVTH---HNALDMELYLRIAPELYLKRLLVGGLERVYEINRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+     LM     +  + A +V      ++Q           
Sbjct: 263 GISTQHNPEFTMLEFYWAYADVYDLMDLTEEMFAQLAQDVCGTTRITYQGQEIELGGRWN 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T  +A      ++           D        Q+ G  V   +      +++    +
Sbjct: 323 RLTFHQALEEIGGLEPQQYQ------DHDQAQALVQRLGENVQTGEQLGKTQAKLFDLLV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +     +  YP   S L+     +P  T RFEL+ C  E+ NA  EL DP +QR 
Sbjct: 377 EPK--LIQPHFISHYPTDISPLSRRNEENPELTDRFELFICGREMANAFSELNDPFDQRQ 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE+++QEK    +E + +DED+L  L   MP ++G  +G DRLVML+T + +I EVI  
Sbjct: 435 RFEQQVQEKSAGDDEAHAMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSASIREVILF 494

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 495 PLLRPETK 502


>gi|310639546|ref|YP_003944304.1| lysyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309244496|gb|ADO54063.1| Lysyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 508

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 97/369 (26%), Positives = 172/369 (46%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +    +D    YR+R              + R+ I  S+R Y     ++E+++ 
Sbjct: 152 LYPLPEKYHGLKDVELRYRQRYVDLVMNPEVQKTFITRSRIIQSMRRYLDSLGYLEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G     + F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 212 TLHAIAGGAA-AKPFVTH---HNALDTQLYMRIAIELHLKRLIVGGMEKVYEIGRVYRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y A+  Y+ +M+   N+I   A+ V   +   +Q    +   +  
Sbjct: 268 GVSTRHNPEFTLIELYEAYADYKDIMQLTENLIAHIAQEVLGTQHIQYQGQEVDLTPQWR 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +A      +D    + N +       +  A++  + V    T+  I +      +
Sbjct: 328 RVSMVDAVKEVTGVDFSAQMSNEE------AHRLAKEHKVPVEPHMTFGHILNAFFEHFV 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 382 EET--LIQPTFITGHPVEISPLAKKNEQDPRFTDRFELFVVAREHANAFTELNDPIDQRQ 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E++   +E + +D+DF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 440 RFEAQLLEREHGNDEAHQMDDDFIRALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 499

Query: 346 PFSQSNQEE 354
           P  ++   E
Sbjct: 500 PHMRNRTVE 508


>gi|15923507|ref|NP_371041.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926194|ref|NP_373727.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|57651394|ref|YP_185450.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82750224|ref|YP_415965.1| lysyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87161440|ref|YP_493205.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194278|ref|YP_499070.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|156978845|ref|YP_001441104.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|221142291|ref|ZP_03566784.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253315214|ref|ZP_04838427.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|255005310|ref|ZP_05143911.2| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|262050002|ref|ZP_06022861.1| lysyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262052543|ref|ZP_06024740.1| lysyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269202138|ref|YP_003281407.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|284023526|ref|ZP_06377924.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294850378|ref|ZP_06791111.1| lysyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295407408|ref|ZP_06817205.1| lysyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296276170|ref|ZP_06858677.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297246488|ref|ZP_06930328.1| lysyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|54039675|sp|P67610|SYK_STAAN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|54042058|sp|P67609|SYK_STAAM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71153565|sp|Q5HIF7|SYK_STAAC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123098061|sp|Q2G0Q3|SYK_STAA8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123727449|sp|Q2YVW8|SYK_STAAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123749646|sp|Q2FJC3|SYK_STAA3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230591|sp|A7WYS8|SYK_STAA1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|13700407|dbj|BAB41705.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14246285|dbj|BAB56679.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|57285580|gb|AAW37674.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82655755|emb|CAI80154.1| lysyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87127414|gb|ABD21928.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201836|gb|ABD29646.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|156720980|dbj|BAF77397.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|259159590|gb|EEW44637.1| lysyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259161937|gb|EEW46520.1| lysyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262074428|gb|ACY10401.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269940088|emb|CBI48464.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|283469809|emb|CAQ49020.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
 gi|285816216|gb|ADC36703.1| Lysyl-tRNA synthetase (class II) [Staphylococcus aureus 04-02981]
 gi|294822802|gb|EFG39238.1| lysyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294967765|gb|EFG43797.1| lysyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297176675|gb|EFH35937.1| lysyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|312829012|emb|CBX33854.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315128646|gb|EFT84649.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315193880|gb|EFU24274.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315196201|gb|EFU26557.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|329313236|gb|AEB87649.1| Lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329725054|gb|EGG61549.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329729791|gb|EGG66188.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|329731092|gb|EGG67464.1| lysine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 495

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A  V       +     +  S   
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWT 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        +          A++ GI +     +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVD------FYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 372 EET--LIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKG 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|115315489|ref|YP_764212.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156503376|ref|YP_001429441.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|115130388|gb|ABI83575.1| lysine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156253979|gb|ABU62485.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 576

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R YF    F+E+++ 
Sbjct: 222 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETP 281

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 282 MMHVLQGGAA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 337

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   +I  +     N   + E
Sbjct: 338 GISSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYE 397

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 398 RISMVDSIVKY-----NDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETV 452

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 453 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFIGAREVANGFSELNDAEDQAE 510

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 511 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 570

Query: 346 PFSQSN 351
           P  +  
Sbjct: 571 PHMKPE 576


>gi|294666712|ref|ZP_06731948.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292603537|gb|EFF46952.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 505

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y Q+M     +IR  A+ V      S+   + +      
Sbjct: 266 GVSTRHNPEFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  IRV     W  +   I    +
Sbjct: 326 RWRMDEAVRHH-----NPEISAADCTDREALLRHCERLKIRVKPSYGWGKLLLEIFEATV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  
Sbjct: 381 EHT--LVQPTFITDHPVEVSPLARSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K    +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 439 RFQAQVQAKDGGDDEAMHFDADYIRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLF 498

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 499 PYMRPE 504


>gi|325925183|ref|ZP_08186596.1| lysyl-tRNA synthetase (class II) [Xanthomonas perforans 91-118]
 gi|325544437|gb|EGD15807.1| lysyl-tRNA synthetase (class II) [Xanthomonas perforans 91-118]
          Length = 505

 Score =  345 bits (886), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y Q+M     +IR  A+        S+   + +      
Sbjct: 266 GVSTRHNPEFTMLELYEAYATYHQIMDLTEQVIRDTAQTVLGTTQVSWDGADIDLAPAFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  IRV     W  +   I    +
Sbjct: 326 RWRMDEAVRHH-----NPEISAADCTDREALLRHCERLKIRVKPSYGWGKLLLEIFEATV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  
Sbjct: 381 EHT--LVQPTFITDHPVEVSPLARSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K    +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 439 RFQAQVQAKDGGDDEAMHFDADYIRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLF 498

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 499 PYMRPE 504


>gi|323705606|ref|ZP_08117180.1| lysyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535083|gb|EGB24860.1| lysyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 506

 Score =  345 bits (886), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 94/369 (25%), Positives = 165/369 (44%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  ++RE+     FIE+++ 
Sbjct: 142 LQILPDKWHGLKDPDLRYRQRYVDLIINPTVKETFIKRTAIIKAIREFLDSRGFIEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 202 ILHTIAGGAA-ARPFITH---HNALDIDMYLRIALELHLKRLIVGGLEKVYEMGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y A+  Y  +M    N+    AE     K   +Q    +      
Sbjct: 258 GMDIRHNPEFTLLELYEAYTDYHGMMDITENLFAYVAEKVNGSKKIIYQGTEIDLTPPWR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A   + +ID      + +          A++  + V       D+ + +  E  
Sbjct: 318 RLTMIDAIKEFLDIDFNKVSSDEE------AIEIAKRHHLEVKEGMKKGDVIALVFDELC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     +P  T RFE +    E+ NA  EL DPI+Q+ 
Sbjct: 372 ESH--LIQPTFIIDYPVEISPLAKRKHDNPALTSRFEAFIYGREIANAFSELNDPIDQKE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++++   +E + +D+DF+  L   MP + G+ +G DRL+M +T A +I +VI  
Sbjct: 430 RFIEQLKQREAGNDEAHMMDDDFINALEVGMPPTGGLGIGIDRLIMFMTDAYSIRDVILF 489

Query: 346 PFSQSNQEE 354
           P  +   ++
Sbjct: 490 PTMKPRTDQ 498


>gi|21242620|ref|NP_642202.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|39932221|sp|Q8PLC6|SYK_XANAC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21108084|gb|AAM36738.1| lysyl-tRNA synthetase heat inducible [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 505

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y Q+M     +IR  A+ V      S+   + +      
Sbjct: 266 GVSTRHNPEFTMLELYEAYATYHQIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  IRV     W  +   I    +
Sbjct: 326 RWRMDEAVRHH-----NPEISAADCTDREALLRHCERLKIRVKPSYGWGKLLLEIFEATV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  
Sbjct: 381 EHT--LVQPTFITDHPVEVSPLARSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K    +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 439 RFQAQVQAKDGGDDEAMHFDADYIRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLF 498

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 499 PYMRPE 504


>gi|254368388|ref|ZP_04984405.1| lysine-tRNA ligase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121282|gb|EDO65483.1| lysine-tRNA ligase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 576

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R YF    F+E+++ 
Sbjct: 222 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETP 281

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 282 MMHVLQGGAA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 337

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   +I  +     N   + E
Sbjct: 338 GISSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYE 397

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 398 RISMVDSIVKY-----NDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETV 452

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 453 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFIGAREVANGFSELNDAEDQAE 510

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 511 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 570

Query: 346 PFSQSN 351
           P  +  
Sbjct: 571 PHMKPE 576


>gi|78047472|ref|YP_363647.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|123771380|sp|Q3BUB6|SYK_XANC5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78035902|emb|CAJ23593.1| lysyl-tRNA synthetase heat inducible [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 505

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y Q+M     +IR  A+        S+   + +      
Sbjct: 266 GVSTRHNPEFTMLELYEAYATYHQIMDLTEQVIRDTAQTVLGTTQVSWDGADIDLAPAFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  IRV     W  +   I    +
Sbjct: 326 RWRMDEAVRHH-----NPEISAADCTDREALLRHCERLKIRVKPSYDWGKLLLEIFEATV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  
Sbjct: 381 EHT--LVQPTFITDHPVEVSPLARSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K    +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 439 RFQAQVQAKDGGDDEAMHFDADYIRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLF 498

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 499 PYMRPE 504


>gi|253687050|ref|YP_003016240.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511528|sp|C6D8Z6|SYK_PECCP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|251753628|gb|ACT11704.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 505

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + +++R + V++ F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFRIRSKVMAAIRSFMVDHGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+    N+ R    +V       + +   +     E
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGSTTVEYGDQTFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       AQ  GI++        I + I  E  
Sbjct: 326 KLTMREAICKY-----RPETNVADLDDLEKATAIAQSLGIKIEKSWGLGRIVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESS--LIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFAQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|21282201|ref|NP_645289.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49485381|ref|YP_042602.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|38258393|sp|Q8NXZ0|SYK_STAAW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56749397|sp|Q6GBX1|SYK_STAAS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21203637|dbj|BAB94337.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49243824|emb|CAG42249.1| lysyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
          Length = 495

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A  V       +     +  S   
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWT 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        +          A++ GI +     +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVD------FYEVKSDDEAKALAKEHGIEIKDTMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 372 EET--LIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKG 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|312898248|ref|ZP_07757639.1| lysyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620745|gb|EFQ04314.1| lysyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 502

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 89/368 (24%), Positives = 161/368 (43%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I   +REY     F+E+++ 
Sbjct: 147 LRPLPEKFHGLTDKETRYRQRYLDLIVNPEVKNTFIMRSRIIKGIREYLDARNFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   ++L+ +PE   K+LL  G E+++     +RN 
Sbjct: 207 MLHNIAGGAA-ARPFVTH---HNALDMDIFLRIAPELHLKRLLVGGLERVYEMNRCFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A    E +++    ++   A ++      ++ +      +   
Sbjct: 263 GIDTRHNPEFTTVELYQAFGDLEDVIRITEELVSELALKLYGTTKITYIDKEIELAAPWN 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y   D                   A +  +     D    I +    + +
Sbjct: 323 RMTMIEAVEKYTGKDFSKV------ETVEEARKIADELHVEYGEYDGIGKIINACFEDYV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   T++  +P   S L     ++P  T RFE +    EL N   EL DP++QR 
Sbjct: 377 EEN--LIQPTVITGHPLEISPLTKQDASNPLLTHRFEAFIYGRELANGFSELNDPLDQRD 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+M+E+    +E + +DED+   L   MP + G+ +G DRLVM +T + +I +V+  
Sbjct: 435 RFIKQMEERAHGDDEAHQMDEDYCRALEYGMPPAGGLGIGIDRLVMFLTNSPSIRDVLLF 494

Query: 346 PFSQSNQE 353
           P S+  Q+
Sbjct: 495 PLSRPEQK 502


>gi|70727492|ref|YP_254408.1| lysyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|123762274|sp|Q4L3H5|SYK_STAHJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|68448218|dbj|BAE05802.1| Lysyl-tRNA synthetase class II [Staphylococcus haemolyticus
           JCSC1435]
          Length = 496

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 167/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +  F+E+++ 
Sbjct: 143 LRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTQTFINRSKIIQEMRNYLNKQGFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 203 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A+         +     +  S   
Sbjct: 259 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQEVFGSAKVQYNEEEIDLESAWT 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D      + +          A++ GI + ++  +  I +    +K+
Sbjct: 319 RLHIVDAVKEATGVDFYQIKSDEE------AIAAAKEHGIEITNNMKYGHILNEFFEQKV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 373 EET--LIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 431 RFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 490

Query: 346 PFSQ 349
           P+ +
Sbjct: 491 PYMR 494


>gi|307243777|ref|ZP_07525911.1| lysine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492853|gb|EFM64872.1| lysine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 636

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 169/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              L R     +LR Y  E  F+E+++ 
Sbjct: 142 LQVLPEKYHGLKDVDLRYRQRYVDLIVNPEVKDAFLTRTKALKALRSYLDERGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +  P+YL+ + E   K+L+  G +K++     +RN 
Sbjct: 202 ILNTIAGGA-NARPFITH---HNTLDIPMYLRIANELYLKRLIVGGFDKVYEMGRMFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PE+T +E Y+A+  Y+ +M    N+I   A+VA      ++Q    +     +
Sbjct: 258 GMDMKHNPEYTAIELYQAYADYKDMMDITENVISHMAQVATGSMKINYQGTEIDFTPPWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E    YA +D      + +          A++ GI +       ++ +    E  
Sbjct: 318 RMTMEECVKEYAGVDFSEINTDEEAL------AIAREKGIEITPGMRRGEVINAFFEEFG 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPR T RFE +A   EL NA  EL DPI+QR 
Sbjct: 372 EDK--LIQPTFITHHPVEVSPLAKRNVEDPRRTDRFEAFANKWELANAFSELNDPIDQRG 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++++++   +E   +DEDF+  L   +P + G+ +G DR++ML+T +  I +V+  
Sbjct: 430 RFEDQVRKRELGDDEACEMDEDFINALEVGLPPTGGLGIGIDRVIMLLTDSTTIRDVLLF 489

Query: 346 PFSQSNQE 353
           P  +  ++
Sbjct: 490 PTMKPLRD 497


>gi|166711948|ref|ZP_02243155.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 505

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y ++M     +IR  A+ V      S+   + +      
Sbjct: 266 GVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  IRV     W  +   I    +
Sbjct: 326 RWRMDEAVRHH-----NPEISAADCTDRDALLRHCERLKIRVKPSYGWGKLLLEIFEATV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  
Sbjct: 381 EHT--LVQPTFITDHPVEVSPLARSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K    +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 439 RFQAQVQAKDGGDDEAMHFDADYIRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLF 498

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 499 PYMRPE 504


>gi|294795203|ref|ZP_06760337.1| lysine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294453995|gb|EFG22370.1| lysine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 505

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 168/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I + +REY + + F+E+++ 
Sbjct: 141 LRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSQIVAKIREYMMRDGFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   +Y++ +PE   K+L+  G +++F     +RN 
Sbjct: 201 MMHAIPGGAA-ARPFITH---HNALDIDIYMRIAPELYLKRLIVGGMDRVFEMNRCFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   E  ++   N++   A+ V   +  ++Q    N      
Sbjct: 257 GIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEINLTPPWN 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+AE   +Y   D                   A +  +    +D    I +    + +
Sbjct: 317 RITMAEGVKKYTGEDFDAV------TTIEEARAIADRLNVEYTENDGIGKILNLCFEDYV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   TI+  +P   S LA     +P  T+RFE +    EL N   EL DPI+Q+ 
Sbjct: 371 EEN--LIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSELNDPIDQKQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E++   +E + +DEDF+  L   +P ++G+ +G DRLVM +T + +I +V+  
Sbjct: 429 RFLDQLKEREAGDDEAHRMDEDFVTALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PLMKPE 494


>gi|149183582|ref|ZP_01862003.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848698|gb|EDL62927.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 405

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 168/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y   N ++E+++ 
Sbjct: 51  LRPLPEKFHGLKDVEQRYRQRYLDLITSQESKQTFIARSKIIQSMRRYLDNNGYLEVETP 110

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 111 MMHAIAGGAS-ARPFITH---HNALDMQLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 166

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    N+I   A+         + +   N   +  
Sbjct: 167 GVSTRHNPEFTMIELYEAYADYRDIMALTENLIAHIAKEVFGSTTVQYGDYEVNLEPQWA 226

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   +   D    + + +       +  A++ GI V     +  I +    +K+
Sbjct: 227 RLHMVDAVKEHTGADFWKEMSDEE------AHALAKEHGIEVKPTMQYGHILNEFFEQKV 280

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 281 EDK--LIQPTFIYGHPVEISPLAKKNDEDGRFTDRFELFIVGREHANAFTELNDPIDQRE 338

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+DF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 339 RFESQLKEREEGNDEAHMMDDDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 398

Query: 346 PFSQSN 351
           P  +  
Sbjct: 399 PLMRHR 404


>gi|323141547|ref|ZP_08076432.1| lysine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413959|gb|EFY04793.1| lysine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 656

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 91/370 (24%), Positives = 163/370 (44%), Gaps = 27/370 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I  S+RE    + F+E+++ 
Sbjct: 151 LRPLPEKWHGLKDVETRYRQRYVDLIVNPEVRDTFVKRSQIIRSVREVLDSHDFLEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F       + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 211 ILNTIAGGAA-ARPFI---SYHNALDMQVYMRIAPELYLKRLIVGGMDRVYEMGRVFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A   Y  +M     ++ + A +V      +++       S  +
Sbjct: 267 GIDNRHNPEFTSVEIYQAFADYRDMMDLTEEVVVKTAEKVLGTTTINYEGTTIELASPWK 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA   Y+  D           D       A++  + V        I +    E +
Sbjct: 327 RMSMIEAVKEYSGKDFTNV------TDLEEARAIAKELNVAVEPSFGIGKIINACFEEYV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P +P  T RFE Y    E+CN   EL DPI+Q+ 
Sbjct: 381 EDK--LIQPTFITGHPKEISPLAKSNPENPEITDRFEAYIYGREICNGFTELNDPIDQKE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++E+     E   +DEDF+  L   +P + G+ +G DRLVM +T ++ I +V++ 
Sbjct: 439 RFLKQVEERANGDEEANMMDEDFVNALEYGLPPTGGLGIGIDRLVMFLTNSSTIRDVLFF 498

Query: 346 PFSQSNQEEI 355
           P  +   + +
Sbjct: 499 PTMKPLGKAV 508


>gi|302332230|gb|ADL22423.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 495

 Score =  345 bits (885), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A  V       +     +  S   
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWT 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        +          A++ GI +     +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVD------FYEVKSDEEAKALAKEYGIEIKDTMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 372 EET--LIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKG 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|169825711|ref|YP_001695869.1| lysyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|259511527|sp|B1HSY5|SYK_LYSSC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|168990199|gb|ACA37739.1| Lysyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 500

 Score =  345 bits (885), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 161/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y     ++E+++ 
Sbjct: 145 LRPMPEKFHGLQDVEQRYRQRYLDLMTNEDSKLTFIARSKIIRAIRNYLDNAGYLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 205 MLHTIAGGAA-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N+I   A+ V       +     N     +
Sbjct: 261 GISTRHNPEFTMIELYEAYADYQDIMSLTENLIAHVAQEVLGTTTVQYGEDEINLAVGWK 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +       +      A++ G+ V        I +    +KI
Sbjct: 321 RVHMVDAVKEATGVDFWQPMT------KEQAQALAKEHGVEVKDVHEVGHIINEFFEQKI 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 375 EET--LVQPTFVYGHPVEISPLAKKNPEDERFTDRFELFIVRREHANAFTELNDPIDQRQ 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK    +E + +D DF+  L   MP + G+ +G DRL+ML+T + +I +V+  
Sbjct: 433 RFEAQLAEKAAGNDEAHEMDNDFIEALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMR 496


>gi|194017974|ref|ZP_03056581.1| lysyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010311|gb|EDW19886.1| lysyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 499

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 171/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y     ++E+++ 
Sbjct: 146 LRPLPDKYHGLKDVEQRYRQRYLDLIVNPESKQTFIMRSKIIQSMRRYLDSKGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++   PG  +  R F T     + +  PLY++ + E   K+L+  G EK++     +RN 
Sbjct: 206 TMHSIPGGAS-ARPFITH---HNALDMPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N+I   AE V       +     +   E +
Sbjct: 262 GVSTRHNPEFTMIELYEAYADYKDIMNLTENLIAHIAEEVLGTTTIQYGEDEIDLKPEWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + EA      +D    +              A   GI +  + T   I +    +K+
Sbjct: 322 RLHMVEAVKEATGVDFWQEMSI------EEAKQHAADHGIEITKNMTVGHIINEFFEQKV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EET--LVQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANAFTELNDPIDQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+DF+  L   MP + G+ +G DRL+ML+T + +I +V+  
Sbjct: 434 RFEAQLKEREEGNDEAHLMDDDFVEALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLF 493

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 494 PQMRNR 499


>gi|294793384|ref|ZP_06758529.1| lysine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294455815|gb|EFG24180.1| lysine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 505

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 168/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I + +REY + + F+E+++ 
Sbjct: 141 LRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSQIVAKIREYMMRDGFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   +Y++ +PE   K+L+  G +++F     +RN 
Sbjct: 201 MMHAIPGGAA-ARPFITH---HNALDIDIYMRIAPELYLKRLIVGGMDRVFEMNRCFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   E  ++   N++   A+ V   +  ++Q    N      
Sbjct: 257 GIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEINLTPPWN 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+AE   +Y   D                   A +  +    +D    I +    + +
Sbjct: 317 RITMAEGVKKYTGEDFDAV------TTIEEARAIADRLNVEYTENDGIGKILNLCFEDYV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   TI+  +P   S LA     +P  T+RFE +    EL N   EL DPI+Q+ 
Sbjct: 371 EEN--LIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSELNDPIDQKQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E++   +E + +DEDF+  L   +P ++G+ +G DRLVM +T + +I +V+  
Sbjct: 429 RFLDQLKEREAGDDEAHRMDEDFVTALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PLMKPE 494


>gi|157690864|ref|YP_001485326.1| lysyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157679622|gb|ABV60766.1| lysine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 499

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 171/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y     ++E+++ 
Sbjct: 146 LRPLPDKYHGLKDVEQRYRQRYLDLIVNPESKQTFIMRSKIIQSMRRYLDSKGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++   PG  +  R F T     + +  PLY++ + E   K+L+  G EK++     +RN 
Sbjct: 206 TMHSIPGGAS-ARPFITH---HNALDMPLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N+I   AE V       +     +   E +
Sbjct: 262 GVSTRHNPEFTMIELYEAYADYKDIMNLTENLIAHIAEEVLGTTTIQYGEDEIDLKPEWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + EA      +D    +              A   GI +  + T   I +    +K+
Sbjct: 322 RLHMVEAVKEATGVDFWQEMSV------EEAQQHAADHGIEITKNMTVGHIINEFFEQKV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EET--LVQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVRREHANAFTELNDPIDQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+DF+  L   MP + G+ +G DRL+ML+T + +I +V+  
Sbjct: 434 RFEAQLKEREEGNDEAHLMDDDFVEALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLF 493

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 494 PQMRNR 499


>gi|289663373|ref|ZP_06484954.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289668829|ref|ZP_06489904.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 505

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y ++M     +IR  A+ V      S+   + +      
Sbjct: 266 GVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  IRV     W  +   I    +
Sbjct: 326 RWRMDEAVRHH-----NPEISAADCTDRDALLRHCERLKIRVKPSYGWGKLLLEIFEATV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  
Sbjct: 381 EHT--LVQPTFITDHPVEVSPLARSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K    +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 439 RFQAQVQAKDGGDDEAMHFDADYIRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLF 498

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 499 PYMRPE 504


>gi|317126822|ref|YP_004093104.1| lysyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315471770|gb|ADU28373.1| lysyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 499

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 168/369 (45%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y     ++E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEQRYRQRYVDLIVNPEVRETFILRSKILQSMRRYLDNQGYLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 TMHAIAGGAS-ARPFVTH---HNALDMTLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M+   N+I   AE V      ++  V+ +     +
Sbjct: 258 GISTRHNPEFTMIELYEAYADYNDIMELTENLIAHIAEEVLGTTTVNYNGVDVDLKPRWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   Y  +D    + +            A++  + V     +  + +      +
Sbjct: 318 RVHMVDAIKEYTGVDFWEEMTD------EEARALAKEHNVPVKDTMKYGHVVNEFFETFV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EEK--LVQPTFIYGHPVDISPLAKKNADDERFTDRFELFIVAREHANAFTELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E+++  +E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEREQGDDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNSQSIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +    E
Sbjct: 490 PQMRHRDAE 498


>gi|325916712|ref|ZP_08178969.1| lysyl-tRNA synthetase (class II) [Xanthomonas vesicatoria ATCC
           35937]
 gi|325537061|gb|EGD08800.1| lysyl-tRNA synthetase (class II) [Xanthomonas vesicatoria ATCC
           35937]
          Length = 505

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 159/365 (43%), Gaps = 24/365 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE Y A+ +Y ++M     +IR  A+          +      +    
Sbjct: 266 GVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVNWDGAAIDLAPAFR 325

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
               +   R+        +   D  DR  L    ++  IR      W  +   I    +E
Sbjct: 326 RWRMDEAVRH----HNPEITAADCTDREALLRHCERLKIRTKPSYGWGKLLLEIFEATVE 381

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  R
Sbjct: 382 HT--LVQPTFITDHPVEVSPLARSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAAR 439

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+ ++Q K    +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  P
Sbjct: 440 FQAQVQAKDGGDDEAMHYDADYIRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLFP 499

Query: 347 FSQSN 351
           + +  
Sbjct: 500 YMRPE 504


>gi|254373628|ref|ZP_04989112.1| lysine-tRNA ligase [Francisella novicida GA99-3548]
 gi|151571350|gb|EDN37004.1| lysine-tRNA ligase [Francisella novicida GA99-3548]
          Length = 576

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R YF    F+E+++ 
Sbjct: 222 IRPLPDKFHGLADQEMRYRQRYVDLITNEKARGVFKVRSKVVSFIRNYFDRLDFMEVETP 281

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 282 MMHVLQGGAA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 337

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   +I  +     N   + E
Sbjct: 338 GVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYE 397

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 398 RISMVDSIVKY-----NDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETV 452

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 453 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFIGAREVANGFSELNDAEDQAE 510

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 511 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 570

Query: 346 PFSQSN 351
           P  +  
Sbjct: 571 PHMKPE 576


>gi|188575994|ref|YP_001912923.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|238689562|sp|B2SV97|SYK_XANOP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|188520446|gb|ACD58391.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 505

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R +    +F+E+++ 
Sbjct: 150 LRPLPDKWHGLSDVEQRYRQRYVDLIVTPEAREVFIKRSKIIRAMRAWLDARRFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG  T  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 210 MMHYIPGGAT-AKPFTTH---HNALDLDLYLRVAPELYLKRLVVGGLERVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y ++M     +IR  A+ V      S+   + +      
Sbjct: 266 GVSTRHNPEFTMLELYEAYATYHEIMDLTEQVIRDTAQSVLGTTQVSWDGADIDLAPAFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   D  DR  L    ++  IRV     W  +   I    +
Sbjct: 326 RWRMDEAVRHH-----NPEISAADCTDRDALLRHCERLKIRVKPSYDWGKLLLEIFEATV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    EL N   EL DP +Q  
Sbjct: 381 EHT--LVQPTFITDHPVEVSPLARSSDTEPGYTDRFELFINGKELANGFSELNDPEDQAA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K    +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 439 RFQAQVQAKDGGDDEAMHFDADYIRALEYGMAPTGGLGIGIDRLVMLLTGSTSIRDVLLF 498

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 499 PYMRPE 504


>gi|325849665|ref|ZP_08170868.1| lysine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480006|gb|EGC83084.1| lysine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 637

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 87/365 (23%), Positives = 161/365 (44%), Gaps = 29/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              + R+ I S +R +     F+E+++ 
Sbjct: 136 LQILPEKWHGLKDPDIRYRQRYVDLIVNPEVKDVFVLRSKIISEIRRFLENRGFLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F T     + +   +YL+ + E   K+L+  G +K++     +RN 
Sbjct: 196 ILNTIAGGAT-ARPFITH---HNSLDIGMYLRIASELYLKRLIVGGFDKVYEIGRMFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +E +M+    ++   A       +  F        +   
Sbjct: 252 GMDATHNPEFTTMELYQAYGDFEDMMEITETMVEYVANKVKGSTVVEFDGNEIELKAPWR 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +A   ++ +D     +  D          A++  I V   D+  +I +    E +
Sbjct: 312 RVSMIDAVKEFSGVDFNEITEYED------AVKIAKEKNIEVK--DSRGEIIAEFFDEFV 363

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFE +    E+ NA  EL D ++Q+ 
Sbjct: 364 EEK--LIQPTFIVDYPVEISPLAKRKNDDPSLTYRFEAFINGSEIANAFSELNDAVDQKE 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +++   +E   +D DF+  L   MP + G+ +G DRL+M++TG ++I +V+  
Sbjct: 422 RFLDQVAKREAGDDEAQMMDYDFVNALEVGMPPTGGLGIGIDRLIMILTGQHSIRDVLLF 481

Query: 346 PFSQS 350
           P  + 
Sbjct: 482 PTMKP 486


>gi|282850021|ref|ZP_06259403.1| lysine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282580210|gb|EFB85611.1| lysine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 505

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 168/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I + +REY + + F+E+++ 
Sbjct: 141 LRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSQIVAKIREYMMRDGFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   +Y++ +PE   K+L+  G +++F     +RN 
Sbjct: 201 MMHAIPGGAA-ARPFITH---HNALDIDIYMRIAPELYLKRLIVGGMDRVFEMNRCFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   E  ++   N++   A+ V   +  ++Q    N      
Sbjct: 257 GIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQEITYQGTEINLTPPWN 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+AE   +Y   D                   A +  +    +D    I +    + +
Sbjct: 317 RITMAEGVKKYTGEDFDAV------TTIEEARAIADRLNVEYTENDGIGKILNLCFEDYV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   TI+  +P   S LA     +P  T+RFE +    EL N   EL DPI+Q+ 
Sbjct: 371 EEN--LIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSELNDPIDQKQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E++   +E + +DEDF+  L   +P ++G+ +G DRLVM +T + +I +V+  
Sbjct: 429 RFLDQLKEREAGDDEAHRMDEDFVTALEYGLPPTAGLGVGIDRLVMFLTDSASIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PLMKPE 494


>gi|307153161|ref|YP_003888545.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306983389|gb|ADN15270.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 573

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 106/367 (28%), Positives = 163/367 (44%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +S+R Y     F+EI++ 
Sbjct: 156 LLPLPDKFHGLTDIEKRYRQRYVDLIINPEVRETFRRRAQITASIRRYLEGEGFLEIETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 216 VLQSEAGGA-DARPFIT---YHNTLEMDLYLRIATELHLKRLIVGGFEKVFEMGRIFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M    NII  AA +       ++Q+   +      
Sbjct: 272 GVSTRHNPEFTSIEIYQAYADYHDMMVLTENIITNAAKDALGTLKVTYQDQEIDLTPPWR 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            +T+ +       ID                   AQ+AGI+V+ D      +      +K
Sbjct: 332 RLTMHQLVEEKTGIDFNQFQT------FEEGKKAAQKAGIQVSEDCKTLGKLLYESFEQK 385

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E +  +   T +  +P   S LA  +   P   +RFELY    EL N+  EL DPI+QR
Sbjct: 386 VEES--LIEPTFVLDFPVEISPLAKPHRNKPGLVERFELYIVGRELANSFSELTDPIDQR 443

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E + ++K     E + +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 444 ERLEAQAEKKAAGDLEAHSVDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIA 503

Query: 345 TPFSQSN 351
            P  +S 
Sbjct: 504 FPLLKSQ 510


>gi|218549238|ref|YP_002383029.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218356779|emb|CAQ89407.1| lysine tRNA synthetase, inducible [Escherichia fergusonii ATCC
           35469]
 gi|324114245|gb|EGC08218.1| lysyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|325497656|gb|EGC95515.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 505

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRKFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQDVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDDFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|332982217|ref|YP_004463658.1| lysyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699895|gb|AEE96836.1| lysyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 497

 Score =  345 bits (884), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 90/369 (24%), Positives = 163/369 (44%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YRRR              + R+ I  ++R +     ++E+++ 
Sbjct: 141 LRPLPEKWHGLQDPDLRYRRRYLDLIMNDKVKETFVTRSRIIKTMRNFLDARGYLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G  T  R F T     + +   +YL+ + E   K+L+  G E+++     +RN 
Sbjct: 201 VLQTTAGGAT-ARPFITH---HNALDIDMYLRIATELHLKRLIIGGFERVYEIGRIFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M     +I   A+ V      ++Q    +      
Sbjct: 257 GMDIKHNPEFTTIELYEAYCDYHDMMDLTEQLITYIAQEVLGTLKITYQGQEIDLALPWR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   +   D      +            A++ G+ +   DT  ++ + +    +
Sbjct: 317 RMRMVDAIKEFTGEDFEAVASD------DQARALARRLGVEIKDSDTRGNVINAVFETFV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     DP   +RFEL+    E+ NA  EL DP++QR 
Sbjct: 371 EEH--LVQPTFILDYPIEVSPLAKRTDYDPMMAERFELFITGREIANAFSELNDPLDQRQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +++     E + +DEDF+  +   MP + G+ +G DRLVML+T + +I +VI  
Sbjct: 429 RFIMQAKQRAAGDEEAHMMDEDFVMAMEYGMPPTGGLGIGVDRLVMLLTDSYSIRDVILF 488

Query: 346 PFSQSNQEE 354
           P  +    +
Sbjct: 489 PTMRPKTSQ 497


>gi|118496782|ref|YP_897832.1| lysyl-tRNA synthetase [Francisella tularensis subsp. novicida U112]
 gi|194324537|ref|ZP_03058309.1| lysyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
 gi|118422688|gb|ABK89078.1| lysyl-tRNA synthetase [Francisella novicida U112]
 gi|194321372|gb|EDX18858.1| lysyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
          Length = 576

 Score =  345 bits (884), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R YF    F+E+++ 
Sbjct: 222 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETP 281

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 282 MMHVLQGGAA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 337

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   +I  +     N   + E
Sbjct: 338 GVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYE 397

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 398 RISMVDSIVKY-----NDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETV 452

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 453 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFIGAREVANGFSELNDAEDQAE 510

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 511 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 570

Query: 346 PFSQSN 351
           P  +  
Sbjct: 571 PHMKPE 576


>gi|330686072|gb|EGG97694.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 495

 Score =  345 bits (884), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 169/364 (46%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +  F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTRTFINRSKIIQEMRNYLNQKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A+ V       +     +  S  +
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQEVLGSAKVQYNGTEIDLESSWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D      + +          A++ GI +  +  +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVDFYNVKSDEE------AKALAKEHGIEITDNMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 372 EET--LIQPTFIYGHPIDISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK++  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|126653301|ref|ZP_01725412.1| lysyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589975|gb|EAZ84104.1| lysyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 500

 Score =  345 bits (884), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 161/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y   + ++E+++ 
Sbjct: 145 LRPMPEKFHGLQDVEQRYRQRYLDLMTNEESKLTFIARSKIIRAIRNYLDNSGYLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 205 MLHTIAGGAA-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M    N+I   A+ V       +     N      
Sbjct: 261 GISTRHNPEFTMIELYEAYADYQDIMSLTENLIAHVAQEVLGTTTVQYGEDEINLAVGWR 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +       +      A++ G+ V        I +    +KI
Sbjct: 321 RVHMVDAVKEATGVDFWQPMT------KEQAQALAKEHGVEVKDVHEVGHIINEFFEQKI 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 375 EET--LVQPTFVYGHPVEISPLAKKNPEDERFTDRFELFIVRREHANAFTELNDPIDQRQ 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK    +E + +D DF+  L   MP + G+ +G DRL+ML+T + +I +V+  
Sbjct: 433 RFEAQLAEKAAGNDEAHEMDNDFIEALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMR 496


>gi|289551683|ref|YP_003472587.1| Lysyl-tRNA synthetase (class II) [Staphylococcus lugdunensis
           HKU09-01]
 gi|289181214|gb|ADC88459.1| Lysyl-tRNA synthetase (class II) [Staphylococcus lugdunensis
           HKU09-01]
          Length = 495

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 165/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNKESTQTFIHRSKIIQEMRNYLNNKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIPGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  +  +M    ++IR  A+         +     +  S   
Sbjct: 258 GVSTRHNPEFTMIELYEAYADFHDIMDLTESLIRHIAQEVFGSAKVQYNGEEIDLESSWT 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D      +            A++ GI +  +  +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVDFYQVKSD------EEAKALAKEHGIEIKENMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EET--LIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKAQGNDEAHEMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|299536697|ref|ZP_07050007.1| lysyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298727811|gb|EFI68376.1| lysyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 497

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 161/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y     ++E+++ 
Sbjct: 142 LRPMPEKFHGLQDVEQRYRQRYLDLMTNEDSKKTFITRSKIIRAIRNYLDNAGYLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MLHTIAGGAA-ARPFITH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A   Y+ +M    N+I   A+ V       +     N     +
Sbjct: 258 GISTRHNPEFTMIELYEAFADYQDIMSLTENLIAHVAQEVLGTTSVQYGEDEINLAVGWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +       +      A++ G+ V        I +    +K+
Sbjct: 318 RVHMVDAVKEATGVDFWQPMT------KEQAQALAKEHGVEVKDVHEVGHIINEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EET--LVQPTFVYGHPVEISPLAKKNPEDERFTDRFELFIVRREHANAFTELNDPIDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M EK+   +E + +D DF+  L   MP + G+ +G DRL+ML+T + +I +V+  
Sbjct: 430 RFEAQMAEKEAGNDEAHEMDNDFIEALEYGMPPTGGLGIGIDRLIMLLTNSPSIRDVLLF 489

Query: 346 PFSQ 349
           P  +
Sbjct: 490 PTMR 493


>gi|89257151|ref|YP_514513.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|167011048|ref|ZP_02275979.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368375|ref|ZP_04984393.1| lysyl-tRNA ligase [Francisella tularensis subsp. holarctica 257]
 gi|290954113|ref|ZP_06558734.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295312498|ref|ZP_06803266.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144982|emb|CAJ80342.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|134254183|gb|EBA53277.1| lysyl-tRNA ligase [Francisella tularensis subsp. holarctica 257]
          Length = 560

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R YF    F+E+++ 
Sbjct: 206 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 266 MMHVLQGGAA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   +I  +     N   + E
Sbjct: 322 GISSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYE 381

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 382 RISMVDSIVKY-----NDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETV 436

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 437 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFIGAREVANGFSELNDAEDQAE 494

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 495 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 554

Query: 346 PFSQSN 351
           P  +  
Sbjct: 555 PHMKPE 560


>gi|92115113|ref|YP_575041.1| lysyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|122990398|sp|Q1QT66|SYK_CHRSD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|91798203|gb|ABE60342.1| lysyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 502

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 156/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R+ + S +R + VE  F+E+++ 
Sbjct: 146 LRPLPDKYHGLTDTEARYRQRYVDLIMNPESRRVFEVRSRVISGIRRFLVERGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQQIPGGAT-ARPFVTH---HNALDIDMYLRVAPELYLKRLVVGGFERVFEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  L+     +IR  A  V       +Q          +
Sbjct: 262 GLSTRHNPEFTMLEFYWAYADYRDLLDLTEAMIRDVAHEVLGTTTVEYQGARYELGEPFQ 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ ++   Y     G  L   D           ++ GI V        + + I     
Sbjct: 322 RLTLRQSILEY-----GDGLGESDIDTFDGARATCERLGIPVKPSWGLGKLQTEIFEAVA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    ++  T +  YPA  S LA     +P  T RFE +    EL N   EL D  +Q  
Sbjct: 377 EDK--LDRPTFITEYPAEVSPLARRNDTNPHVTDRFEFFVGGRELANGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +  EK     E    D D++  L   MP ++G  +G DRLVML+T + +I +V+  
Sbjct: 435 RFAAQAAEKDAGDLEAMYYDADYVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLF 494

Query: 346 PFSQSNQE 353
           P  + + +
Sbjct: 495 PAMRPSAD 502


>gi|269469091|gb|EEZ80642.1| lysyl-tRNA synthetase, class II [uncultured SUP05 cluster
           bacterium]
          Length = 496

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 165/368 (44%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               +R+ I + +R +F E  FIE+++ 
Sbjct: 141 LRPLPEKFHGLADQEIRYRQRYVDLIVSEDSRNVFKRRSQIVAYIRNFFNEFDFIEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  + F T     + +   +YL+ +PE   K+L+  G +K+F     +RN 
Sbjct: 201 MLQTIPGGAT-AKPFETH---HNALDIGMYLRIAPELYLKRLIVGGMDKVFEINRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ +Y  LM     + R  A +V       +Q  + +     +
Sbjct: 257 GLSTRHNPEFTMIEFYQAYATYHDLMDLTEQLFRGIAVDVCGNSSIHYQGDDFDFSKSFD 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I+V ++  +Y           PD      +   A++ GI+V  +         I    +
Sbjct: 317 RISVFDSILKY------NPKLTPDDLSEANVKATAEKLGIQVKDNWGLGKTQIEIFEATV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 371 EEK--LIQPTFITEYPTEVSPLARRNDNNPFITDRFELFIGGREIANGFSELNDAEDQAT 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ EK    +E    D D++  L   MP ++G  +G DRLVML T + +I +V+  
Sbjct: 429 RFKAQVAEKDAGDDEAMHYDADYIRALEYGMPPTAGEGIGIDRLVMLFTDSPSIRDVLLF 488

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 489 PHMRPEVK 496


>gi|328676242|gb|AEB27112.1| Lysyl-tRNA synthetase (class II) [Francisella cf. novicida Fx1]
          Length = 560

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R YF    F+E+++ 
Sbjct: 206 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 266 MMHVLQGGAA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   +I  +     N   + E
Sbjct: 322 GVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYE 381

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 382 RISMVDSIVKY-----NDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETV 436

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 437 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFIGAREVANGFSELNDAEDQAE 494

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 495 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 554

Query: 346 PFSQSN 351
           P  +  
Sbjct: 555 PHMKPE 560


>gi|297582413|ref|YP_003698193.1| lysyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297140870|gb|ADH97627.1| lysyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 503

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 171/367 (46%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y  ++ ++E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEQRYRQRYLDLIVNPEVRDTFVLRSKILQSMRRYLDDHGYLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  + F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHAIPGGAS-AKPFITH---HNALDMTLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    N+I   A+ V       + +   +   +  
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDVMALTENLIAHIAQDVLGTTKVHYGDSEIDLEPKWR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    + + +  D       A++ G+       +  I +      I
Sbjct: 318 RLHMVDAIKEETGVDFWQEMTDEEARD------LAKKHGVPHKDTMKFGHIVNEFFEHFI 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DP++QR 
Sbjct: 372 EEK--LIEPTFVYGHPLDISPLAKKNDEDPRFTDRFELFIVGREHANAFSELNDPVDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E+++  +E + +DEDF+  L   +P + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLLEREQGDDEAHMMDEDFVESLEYGLPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 489

Query: 346 PFSQSNQ 352
           P  +++Q
Sbjct: 490 PQMRNSQ 496


>gi|192359674|ref|YP_001982939.1| lysyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190685839|gb|ACE83517.1| lysyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 532

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+   S +R Y     F+E+++ 
Sbjct: 178 LRPLPDKYHGLSDQEIRYRQRYVDLIVNPEVRDTFRLRSQCISFIRNYMSGRGFMEVETP 237

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  +  R F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 238 MLHVIPGGAS-ARPFVTH---HNALDMDMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 293

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    +++R    +V       +Q+   +      
Sbjct: 294 GVSTRHNPEFTMMEFYQAYADYKDLMDLTEDLLRKLCIDVTGGTTLKYQDSEYDFGKPFV 353

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++   Y        +              A++ G++V        I + I  E +
Sbjct: 354 RLSVFDSILHY-----NPDVTAEQISSVAGATQVAERLGLKVKPGTPLGKIQTEIFEETV 408

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    ++  T +  YP   S LA     +P  T RFE +    EL N   EL D  +Q  
Sbjct: 409 EHK--LDQPTFITEYPTEVSPLARRSDTNPAVTDRFEFFIGGRELANGFSELNDAEDQAE 466

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++ K    +E    D DF+  L   +P ++G  +G DRL+ML   A +I +V+  
Sbjct: 467 RFLEQVKAKDAGDDEAMYYDADFVRALEYGLPPTAGEGIGIDRLIMLFANAPSIRDVLLF 526

Query: 346 PFSQSN 351
           P  +  
Sbjct: 527 PHMRPE 532


>gi|186685281|ref|YP_001868477.1| lysyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|238689252|sp|B2J384|SYK_NOSP7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|186467733|gb|ACC83534.1| lysyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 561

 Score =  345 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 158/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I + +R Y  +  F+EI++ 
Sbjct: 144 LLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 204 VLQSEAGGA-DARPFITH---HNTLEMELYLRIATELHLKRLIVGGFEKVFELGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II   A+ V      ++Q    +      
Sbjct: 260 GISTRHNPEFTTIEVYQAYADYNDMMALTEGIITTVAQEVLGTLQITYQGEPIDLTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEK 225
            +T+ +    +  +D  +                ++ AGI  V    +   + +    EK
Sbjct: 320 RVTMHDLVKEFTGLDFNSFQT------LEEAKTASKNAGIPGVDEAKSIGKLLNLAFEEK 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E N  +   T +  YP   S LA  + + P   +RFEL+    E  N+  EL DPI+QR
Sbjct: 374 VEAN--LIQPTFVIDYPVEISPLAKPHRSQPGLVERFELFIVGRETGNSFSELTDPIDQR 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E + + K     E   +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 432 ERLEAQAERKAAGDLEAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIA 491

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 492 FPLLKPE 498


>gi|284929667|ref|YP_003422189.1| lysyl-tRNA synthetase (class II) [cyanobacterium UCYN-A]
 gi|284810111|gb|ADB95808.1| lysyl-tRNA synthetase (class II) [cyanobacterium UCYN-A]
          Length = 514

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 103/370 (27%), Positives = 159/370 (42%), Gaps = 28/370 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +R+  YR+R                R+ + SS+R++  E  F+EI++ 
Sbjct: 156 LLPLPDKWHGLTDREKRYRQRYIDLIVNPSTRETFRCRSKVISSIRKFLEERGFLEIETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 216 VLQSEAGGA-DARPFITH---HNTLNMDLYLRIATELHLKRLIVGGFEKVFEIGRIFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+    II        Q  I   Q    N      
Sbjct: 272 GISTKHNPEFTSIEIYEAYSDYYGMMELTEKIITRIIHDIGQDTIIECQGQKINFSQPWR 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            IT+ E      N+D                 +   + GI++         + + +  + 
Sbjct: 332 KITMNEIVKEKNNLD------FESFKTFEEAKIAVNKLGIQIPEACRTIGKLLNEVFEQT 385

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    I   T +  +P   S LA  +       +RFELY    EL N+  EL DPI+QR
Sbjct: 386 VEET--IIQPTFILDFPVEISPLAKPHRTKGNVVERFELYIMGRELANSFSELTDPIDQR 443

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R EK+  +K     E + IDEDFL  L   MP + G+ +G DRL+ML+T + +I +VI 
Sbjct: 444 ERLEKQAIKKAAGDLEAHNIDEDFLTALEYGMPPTGGLGIGIDRLIMLLTNSASIRDVIA 503

Query: 345 TPFSQSNQEE 354
            P  ++   E
Sbjct: 504 FPLLKNQNVE 513


>gi|187932242|ref|YP_001892227.1| lysyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|187713151|gb|ACD31448.1| lysyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 576

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + + +R YF    F+E+++ 
Sbjct: 222 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETP 281

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 282 MMHVLQGGAA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 337

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   +I  +     N   + E
Sbjct: 338 GVSSRHNPEFTMLEFYIAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYE 397

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 398 RISMVDSIVKY-----NDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETV 452

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 453 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFIGAREVANGFSELNDAEDQAE 510

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 511 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 570

Query: 346 PFSQSN 351
           P  +  
Sbjct: 571 PHMKPE 576


>gi|254372145|ref|ZP_04987637.1| hypothetical protein FTCG_01528 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569875|gb|EDN35529.1| hypothetical protein FTCG_01528 [Francisella novicida GA99-3549]
          Length = 575

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R YF    F+E+++ 
Sbjct: 221 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETP 280

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 281 MMHVLQGGAA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 336

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   +I  +     N   + E
Sbjct: 337 GVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYE 396

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 397 RISMVDSIVKY-----NDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETV 451

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 452 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFIGAREVANGFSELNDAEDQAE 509

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 510 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 569

Query: 346 PFSQSN 351
           P  +  
Sbjct: 570 PHMKPE 575


>gi|260061783|ref|YP_003194863.1| lysyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785915|gb|EAR17084.1| lysyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 563

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 105/376 (27%), Positives = 167/376 (44%), Gaps = 36/376 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR R              +KR  I +S+R +F E 
Sbjct: 136 LRPLPLPKKDAEGKVFDEFNDPEQRYRMRYVDLVVNPNVRETFVKRTKITNSIRRFFNEK 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 196 GYLEVETPILQPIPGGAA-ARPFQTH---HNALGIPLYLRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVN 158
           FA  +RN      H PEFT++E Y A++ Y  +M+    ++   A         S     
Sbjct: 252 FAKDFRNEGMDRTHNPEFTVMELYVAYKDYNWMMETTEQLLERVAREANGSTRVSAGGET 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    + + +A   +  ID        D  D   L   A   GI V        + 
Sbjct: 312 IDFKAPYPRVPILDAIREHTGID-------VDGMDEAALRDAAAGLGIEVDESMGVGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  E  E +      T +  YP   S L   + + P  T+RFEL     E+ NA  EL
Sbjct: 365 DEIFGECCEHHYV--QPTFIIDYPKEMSPLTKAHRSKPGLTERFELLVNGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE++++  +K  +E   ID DFL  L   MP +SGI +G DRLVML+T  +
Sbjct: 423 NDPIDQRERFEEQLKLSEKGDDEAMFIDRDFLRALEFGMPPTSGIGIGIDRLVMLLTDNS 482

Query: 338 NINEVIWTPFSQSNQE 353
           +I EV++ P  +  ++
Sbjct: 483 SIQEVLFFPQMKPEKK 498


>gi|89892965|ref|YP_516452.1| hypothetical protein DSY0219 [Desulfitobacterium hafniense Y51]
 gi|219666232|ref|YP_002456667.1| lysyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|89332413|dbj|BAE82008.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219536492|gb|ACL18231.1| lysyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 488

 Score =  345 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 173/369 (46%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +       +  YR+R              + R+ I  S+R +     F+E+++ 
Sbjct: 132 MRPLPEKFHGLTNVELRYRQRYVDLIMNPEVRNVFVMRSKIIRSMRNFLEGQGFLEVETP 191

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L   PG     R F T     + +   LYL+ + E   K+L+  G +K+F     +RN 
Sbjct: 192 TLHTIPGGAA-ARPFITH---HNTLDMDLYLRIALELPLKRLIVGGFDKVFEIGRNFRNE 247

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+ ++E +M+   N+I   A+ V      ++Q    +  +   
Sbjct: 248 GISIKHNPEFTMMELYQAYANFEDIMELTENMISAIAKEVHGTTEVTYQGQMIDFKTPWR 307

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + E    Y  +D      +            A++ G++V    +   I +    E +
Sbjct: 308 RLPMLEGILEYGGVDFSQIHTD------EEAQQAAKEKGLKVEPGSSRGKIINEFFEEFV 361

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EPN  +   T +  +P   S LA      P +T RFE +A   EL NA  EL DPI+QR 
Sbjct: 362 EPN--LIQPTFVIGHPVEISPLAKRNAEHPEYTDRFEAFAYGRELGNAFSELNDPIDQRQ 419

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E+ K  +E + +DEDF+  L   +P + G+ +G DRLVML+T + +I +VI  
Sbjct: 420 RFEAQVAERDKGDDEAHMMDEDFVQALEYGLPPTGGLGIGIDRLVMLLTDSASIRDVILF 479

Query: 346 PFSQSNQEE 354
           P  +  +++
Sbjct: 480 PTMRPREDD 488


>gi|146283093|ref|YP_001173246.1| lysyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145571298|gb|ABP80404.1| lysyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 426

 Score =  344 bits (883), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 160/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R++  E  F+E+++ 
Sbjct: 71  LRPLPDKFHGLTDTEQRYRQRYVDLMVNEEVRETFRVRSKVIAHIRKFLAERDFLEVETP 130

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +  P++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 131 MLQTIPGGAA-AKPFETH---HNALDMPMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 186

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+         + +   +      
Sbjct: 187 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGSTDVPYGDKVFHFGEPFA 246

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  ++        +   D  D       A++AG ++   +    +   I  E +
Sbjct: 247 RLSVFDSILKF-----NPEISASDLNDLEKARAIAKKAGAKLLGHEGLGKLQVMIFEELV 301

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 302 EHK--LEQPTFITEYPFEVSPLARRNDRNPNVTDRFELFIGGREIANAYSELNDAEDQAE 359

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 360 RFHAQVADKDAGDDEAMHFDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILF 419

Query: 346 PFSQSN 351
           P  +  
Sbjct: 420 PHMRPE 425


>gi|319952351|ref|YP_004163618.1| lysyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421011|gb|ADV48120.1| Lysyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 563

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 96/378 (25%), Positives = 168/378 (44%), Gaps = 36/378 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  I +S+R++F + 
Sbjct: 136 LRPLPLPKVDPDGKVHDEFNDPELRYRQRYVDLIVNPSVKQTFIKRTKITNSIRQFFNDR 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
           +++E+++  LQ  PG  +  R F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 196 EYLEVETPILQPIPGGAS-ARPFLTH---HNALNIPLYLRVANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVN 158
           F+  +RN      H PEFT++E Y A++ Y  +M     ++   A +             
Sbjct: 252 FSKDFRNEGMDRTHNPEFTVMELYVAYKDYNWMMDMTEQLLEKVAVDANGTSKVPVGENQ 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
               +    + +  A   +   D+          +   L   A++ G+ V        + 
Sbjct: 312 IEFKAPYPRVPILGAIKEHTGYDVAGM-------EEVELRGVAKKLGLEVDETMGIGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E        T +  YP   S L   +  +P  T+RFEL     EL N   EL
Sbjct: 365 DEIFGEKCEHLY--IQPTFITDYPKEMSPLTKQHRDNPALTERFELMVNGKELANCYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            D I+QR RFE++++   K  +E   ID+DF+  L   MP ++GI +G DRLVML+T  +
Sbjct: 423 NDAIDQRERFEEQLKLSAKGDDEAMFIDQDFIRALEYGMPPTAGIGIGIDRLVMLMTNNS 482

Query: 338 NINEVIWTPFSQSNQEEI 355
           +I EV++ P  +  ++ +
Sbjct: 483 SIQEVLFFPQMRPEKKAL 500


>gi|239637503|ref|ZP_04678477.1| lysyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596948|gb|EEQ79471.1| lysyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 495

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 169/364 (46%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +  F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTRTFINRSKIIQEMRNYLNQKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A+ V       +     +  S  +
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQEVLGSAKVQYNGTEIDLESSWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D      + +          A++ GI +  +  +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVDFYNVKSDEE------AKALAKEHGIEITDNMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 372 EET--LIQPTFIYGHPIDISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK++  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|311747795|ref|ZP_07721580.1| lysine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126575786|gb|EAZ80096.1| lysine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 568

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 96/360 (26%), Positives = 164/360 (45%), Gaps = 26/360 (7%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
           + + +  YR+R                R+ I S++R YF ++ ++E+++  LQ   G   
Sbjct: 159 FTDPELRYRQRYVDLTVNPEVKATFKTRSKIISTMRRYFDDHGWLEVETPILQAVHGGAA 218

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F+T     + +  PL+L+ + E   K+L+  G + ++ F   +RN      H PEF
Sbjct: 219 -ARPFATH---HNTLDMPLFLRIANELYLKRLIVGGFDGVYEFGKMFRNEGMDRTHNPEF 274

Query: 118 TMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           T +E Y A++ Y  +M+    +I      +  +                  +T+ ++   
Sbjct: 275 TSMEIYVAYKDYVWMMEMVEELIEQVTESIHGKTKIKVGANEIEFAGPYRRLTMYDSIKE 334

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           YA ID+          D   L     + GI V        +   I  EK+E N  +   T
Sbjct: 335 YAGIDVSKM-------DEEGLRKVCSEMGIAVDDSMGKGKLVDEIFGEKVEAN--LIQPT 385

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            +  YP   + LA  +  +P   +RFEL+    E+ NA  EL DPI+QR RFE +++   
Sbjct: 386 YITDYPIEMTPLAKKHRTEPGLVERFELFVNGKEIANAYTELNDPIDQRERFEDQLKLAA 445

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
           +  +E   +D DFL  L   MP +SG+ +G DRL ML+T    I EV++ P  +  ++++
Sbjct: 446 RGDDEAMAMDTDFLRALEYGMPPTSGLGIGIDRLTMLLTNKTTIQEVLFFPQMRPEKKQV 505


>gi|167758612|ref|ZP_02430739.1| hypothetical protein CLOSCI_00952 [Clostridium scindens ATCC 35704]
 gi|167663808|gb|EDS07938.1| hypothetical protein CLOSCI_00952 [Clostridium scindens ATCC 35704]
          Length = 656

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I S++R Y     F+E+++ 
Sbjct: 148 LQILPEKYHGLTNTDMRYRQRYVDLIMNTESRDTFIKRSRIVSAIRRYLDGQGFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G E+++     +RN 
Sbjct: 208 MLVSNAGGAA-ARPFETHF---NALDEDFKLRISLELYLKRLIVGGLERVYEIGRVFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V    I ++  V  +     E
Sbjct: 264 GLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTTIITYNGVEMDLGKPFE 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D        +          A +  +         DI S    E  
Sbjct: 324 RITMIDAVKKYAGVDWN------EVSTLEEARALADKHHVEYEDRHKKGDILSLFFEEFA 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P DP + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 378 EEH--LIQPTFVMDHPIEISPLTKKKPEDPNYVERFEFFMNGWEMANAYSELNDPIDQRE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDFL  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 436 RFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLMTDSAAIRDVLLF 495

Query: 346 PFSQS 350
           P  +S
Sbjct: 496 PTMKS 500


>gi|291541637|emb|CBL14747.1| Lysyl-tRNA synthetase (class II) [Ruminococcus bromii L2-63]
          Length = 637

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 162/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I  S+R Y     F+E+++ 
Sbjct: 139 LKPLPEKYHGLTNTDLRYRQRYVDLIMNPEVKDTFVKRSKIIGSIRRYLDNQGFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G  +  R F T     + + + L L+ S E   K+L+  G EK++     +RN 
Sbjct: 199 MLVANAGGAS-ARPFLTHF---NALDEDLKLRISLELYLKRLIVGGLEKVYEIGRVFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V      ++  +  +     E
Sbjct: 255 GVDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTTTITYNGIEMDLGKPFE 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y+ +D      + +          A++ G+         DI +    E  
Sbjct: 315 RITMLDAVKKYSGVDFNEIHSDEE------AKAIAKEKGVEFEERHKKGDILNLFFEEFA 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E ++     T +  +P   S L    P +P + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 369 EEHM--IQPTFVMDHPIEISPLTKKKPENPDYVERFEFFMNGWEMANAYSELNDPIDQRE 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +     +  +E    DEDFL  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 427 RFKAQEALLAQGDDEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLF 486

Query: 346 PFSQS 350
           P  +S
Sbjct: 487 PTMKS 491


>gi|222055188|ref|YP_002537550.1| lysyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221564477|gb|ACM20449.1| lysyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 494

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 177/368 (48%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ + + +RE+ V+N F+E+++ 
Sbjct: 139 LLPLPEKFHGLTDVETRYRQRYVDLIVNPEVRELFVKRSRVINLIREFMVKNDFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F T     + +   L+L+ +PE   K+L+  G +++F     +RN 
Sbjct: 199 MMQQIPGGAT-ARPFVTH---HNALDMELFLRIAPELYLKRLVVGGLDRVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ ++E LM     ++   A+ V     FS+Q +  +     +
Sbjct: 255 GISVRHNPEFTMMEFYQAYATFEDLMNYTEELLCHVAQNVLGTLDFSYQGMPISFQRPWK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             TV EA   Y +ID  +        DR + Y  A++ G+ +  D  +  + + I  E  
Sbjct: 315 RFTVKEAILEYGDIDAKS------LEDRDMAYAYAKKIGLDLPEDIGYGKLITEIFEEVA 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     DP    RFE +    E+ NA  EL DP++Q+ 
Sbjct: 369 ETK--LIQPTFITAYPTEVSPLSRKSDHDPEIVDRFEFFCAGREMANAFSELNDPVDQKE 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K K   E + +DED++  L   MP ++G  +G DRLVML+  A +I +VI  
Sbjct: 427 RFLAQVAAKAKGDEEAHYMDEDYIRALEYGMPPTAGEGIGIDRLVMLLCDAPSIRDVILF 486

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 487 PQLRKEVK 494


>gi|325678473|ref|ZP_08158089.1| lysine--tRNA ligase [Ruminococcus albus 8]
 gi|324109841|gb|EGC04041.1| lysine--tRNA ligase [Ruminococcus albus 8]
          Length = 525

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 162/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I S++R Y  E  F+E+++ 
Sbjct: 171 LQPLPEKWHGLKDQDTRYRQRYTDLICNPEVKDTFIKRSKIISTIRRYLDERGFMEVETP 230

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 231 MLVSNAGGAA-ARPFETHY---NALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 286

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    ++ R  A+ V       +     +     E
Sbjct: 287 GVDARHNPEFTLMELYQAYTDYHGMMDLTEDMFRHLAQTVCGGTTIPYGEHEIDLGKPFE 346

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA +D        +          A++  I         DI +    E +
Sbjct: 347 RLTMIDAVKKYAGVDFN------EIKTTEEAKALAKEKHIEFEDRHKRGDILNLFFEEYV 400

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P  P + +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 401 EEH--LIQPTFIMDHPIEISPLTKKKPDAPDYVERFELFINGWEMCNAYSELNDPIDQRE 458

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +       E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 459 RFKAQEEALSSGDEEANRTDEDFLRALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLF 518

Query: 346 PFSQS 350
           P  +S
Sbjct: 519 PTMKS 523


>gi|290969241|ref|ZP_06560766.1| lysine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290780747|gb|EFD93350.1| lysine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 510

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 160/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I   +R Y  E  F+E+++ 
Sbjct: 147 LRPLPEKFHGLTDKETRYRQRYLDLIVNPEVKDTFIKRSKIIKGIRRYLDERGFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T       +   +YL+ +PE   K+LL  G E+++     +RN 
Sbjct: 207 MLHTIAGGAA-ARPFKT---YHHALDMDMYLRIAPELHLKRLLVGGLERVYEMNRCFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A    E ++    +I+   A+        ++ +   +     +
Sbjct: 263 GIDTRHNPEFTTVELYQAFGDLEDVIAITEDIVATLAKQLYGTTKITYLDTEIDLTPPWK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA A +   D           D       A +  +     D    I +    E +
Sbjct: 323 RMTMIEAVAEFTGKDFTGV------TDLAAAQAIADELQVPYGKFDGIGKIINACFEEYV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   TI+  +P   S L      +P  T RFE +    EL N   EL DP++QR 
Sbjct: 377 EEK--LIQPTIITGHPLEISPLTKQQRENPLLTYRFEAFIYGRELANGFSELNDPLDQRR 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +M+E+++  +E + +DED+   L   +P + G+ +G DRLVM +T + +I +V+  
Sbjct: 435 RFTAQMEERERGDDEAHQMDEDYCRALEYGLPPTGGLGIGIDRLVMFLTDSASIRDVLLF 494

Query: 346 PFSQSNQEE 354
           P  +   +E
Sbjct: 495 PTMKPIGKE 503


>gi|67920132|ref|ZP_00513652.1| Lysyl-tRNA synthetase, class-2 [Crocosphaera watsonii WH 8501]
 gi|67857616|gb|EAM52855.1| Lysyl-tRNA synthetase, class-2 [Crocosphaera watsonii WH 8501]
          Length = 573

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 164/367 (44%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +S+R Y     FIEI++ 
Sbjct: 156 LLPLPDKWHGLTDTEKRYRQRYVDLIVNPQVRQTFRRRAQITASIRRYLDNQGFIEIETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 216 VLQSEAGGA-EARPFIT---YHNTLEMDLYLRIATELHLKRLIVGGFEKVFEMGRIFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M+    II  AAE V      ++Q    +  +   
Sbjct: 272 GVSTKHNPEFTSIELYQAYADYNDMMELTEAIITTAAEEVLGTLNITYQGEQIDLSTPWR 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            +T+ +     + +D           D      + ++AG+ V         + + +  + 
Sbjct: 332 RVTMNDIVKEKSGLDFEAF------TDFETAKTEVKKAGLEVPETCQSLGKLLNEVFEQT 385

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E +  +   T +  +P   S LA  +       +RFELY    EL N+  EL DPI+QR
Sbjct: 386 VEES--LIQPTFILDFPVEISPLAKPHRDKQGLVERFELYIVGRELANSFSELTDPIDQR 443

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R EK+ ++K     E + +DEDFL  L   MP + G+ +G DRL+ML+T + +I +VI 
Sbjct: 444 ERLEKQAEQKAAGDLEAHSVDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIA 503

Query: 345 TPFSQSN 351
            P  ++ 
Sbjct: 504 FPLLKNQ 510


>gi|148381459|ref|YP_001256000.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932316|ref|YP_001385834.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936702|ref|YP_001389241.1| lysyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|229559854|sp|A7FZA5|SYK_CLOB1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|229559855|sp|A5I7P4|SYK_CLOBH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148290943|emb|CAL85079.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152928360|gb|ABS33860.1| lysyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932616|gb|ABS38115.1| lysine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 504

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 164/369 (44%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  ++REY     F+E+++ 
Sbjct: 144 LRPLPEKWHGLKDPDLRYRQRYVDLIINQDVRDTFMKRTAIIKTMREYLDNKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILSPIAGGAA-AKPFITH---HNALNIDMYLRIATELYLKRLIVGGFEKVYEIGRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y A+  Y  +M+   N+I     +V       ++    +      
Sbjct: 260 GMDIRHNPEFTVIELYEAYADYNDMMEITENMIAYICEKVLGTTKVQYEGTEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILI 223
            +T+ +A   YA +D  T  D+ +          A++  I       D T  D+   +  
Sbjct: 320 RLTMVDAVREYAGVDFNTIKDDIE------ARTIAKEKHIEFKKELKDCTKGDVLIGLFE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T +  YP   S L      +  FT+RFE +    E+CNA  EL D I 
Sbjct: 374 EFCEDK--LMQPTFICDYPVENSPLTKKKRGNEAFTERFEGFVFGREVCNAYSELNDSIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RF ++++E++   +E Y +D+DF+  L   MP + G+ +G DRL+M +T  ++I +V
Sbjct: 432 QKERFMQQLKERELGDDEAYMMDDDFITSLEVGMPPTGGLGIGIDRLIMFLTDTHSIRDV 491

Query: 343 IWTPFSQSN 351
           I  P  +  
Sbjct: 492 ILFPTMKPQ 500


>gi|113461618|ref|YP_719687.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|112823661|gb|ABI25750.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 502

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 171/366 (46%), Gaps = 24/366 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 145 LRPLPNKFHGLSDQETRYRQRYLDLIANEDSRRTFIIRSKVIAGIREYFISKGFMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 205 MLQIIPGGAS-ARPFITH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  + ++  +     E
Sbjct: 261 GVSIRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLALDILGTTIVPYGDLKFDFGKPFE 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ EA  +Y        +   D  D       AQ+ GI V        + + I  E  
Sbjct: 321 RITMHEAILKYG---AEQGIVKEDLYDFDRAVAIAQKLGIEVQKSWGLGSLVNAIFEEVA 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 378 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   AN+I +VI  
Sbjct: 436 RFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPTAGEGLGIDRLAMLFANANSIRDVILF 495

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 496 PAMKTK 501


>gi|85712972|ref|ZP_01044011.1| Lysyl-tRNA synthetase class II [Idiomarina baltica OS145]
 gi|85693210|gb|EAQ31169.1| Lysyl-tRNA synthetase class II [Idiomarina baltica OS145]
          Length = 503

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 164/368 (44%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              L R+ +   +R Y  E+QF+E+++ 
Sbjct: 147 LRPLPDKFHGLADQETRYRQRYLDLITNEESRNTFLVRSRVIDYIRRYLNEHQFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R FST     + +   L+L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 207 MMQTIPGGAA-ARPFSTH---HNALDMELFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y  +  Y  LM    +++R  A+ V     F    V  +     E
Sbjct: 263 GLSTRHNPEFTMLEFYWGYADYFDLMDMTEDMLRGIAQDVLGSTTFESGGVTYDFGQRFE 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV EA  +Y        +      DR      A+Q G+ V        I   I     
Sbjct: 323 RMTVLEAIIKYM-----PEVTEEQLNDREQATAIAEQVGVDVNSAWGLGKIQIEIFETVA 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P  T RFE +A   EL N   EL D  +Q  
Sbjct: 378 EHR--LIQPTFITAYPAEVSPLARRNDENPFVTDRFEFFAGGRELANGFSELNDAEDQAQ 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++ K+   +E    DED++  L   MP ++G  +G DRLVML+T ++ I +V+  
Sbjct: 436 RFRDQVEAKEAGDDEAMFYDEDYVTALEHGMPPTAGEGIGIDRLVMLLTDSSTIRDVLLF 495

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 496 PHMRPKAD 503


>gi|39997369|ref|NP_953320.1| lysyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|39984260|gb|AAR35647.1| lysyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298506306|gb|ADI85029.1| lysyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 491

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 106/367 (28%), Positives = 178/367 (48%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I + +RE+ V   F+E+++ 
Sbjct: 137 LQPLPEKFHGLTDVETRYRQRYVDLIVNPEVREVFVKRSRIVNLIREFMVRKDFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F T     + +   L+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 197 MMQPIPGGAT-ARPFVTH---HNALDMQLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ ++E LM     ++   A+ V     F++Q +  +     +
Sbjct: 253 GISVRHNPEFTMMEFYQAYATFEDLMDFTEELLCHVAQEVLGTLDFTYQEMPISFQRPWK 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + V EA   Y +ID  +        DR L Y  AQ+ G+ +  D  +  + + I  E  
Sbjct: 313 RLAVVEAILEYGDIDAKS------LADRDLAYAYAQRLGLDLPADVGYGKLITEIFEEVA 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     DP    RFEL+    E+ NA  EL DP++Q+ 
Sbjct: 367 ETK--LIQPTFITAYPTEVSPLSRKSDKDPEIVDRFELFIAGREMANAFSELNDPVDQKE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K K  +E + +DED++  L   +P ++G  +G DRLVML+T + +I +VI  
Sbjct: 425 RFLAQVAAKAKGDDEAHYMDEDYIRALEFGLPPTAGEGIGIDRLVMLLTDSPSIRDVILF 484

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 485 PQLRKEK 491


>gi|170718674|ref|YP_001783868.1| lysyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189082960|sp|B0URW9|SYK_HAES2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|168826803|gb|ACA32174.1| lysyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 502

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 171/366 (46%), Gaps = 24/366 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 145 LRPLPNKFHGLSDQETRYRQRYLDLIANEDSRRTFIIRSKVIAGIREYFISKGFMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 205 MLQIIPGGAS-ARPFITH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  + ++  +     E
Sbjct: 261 GVSIRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLALDILGTTIVPYGDLKFDFGKPFE 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ EA  +Y        +   D  D       AQ+ GI V        + + I  E  
Sbjct: 321 RITMHEAILKYG---AEQGIVKEDLYDFDRAVAVAQKLGIEVQKSWGLGSLVNAIFEEVA 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 378 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   AN+I +VI  
Sbjct: 436 RFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPTAGEGLGIDRLAMLFANANSIRDVILF 495

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 496 PAMKTK 501


>gi|305666391|ref|YP_003862678.1| lysyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88708383|gb|EAR00620.1| lysyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 564

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 100/379 (26%), Positives = 166/379 (43%), Gaps = 37/379 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  I +S+RE+    
Sbjct: 136 LRPLPLPKKDGEGNVYDEFNDPELRYRQRYIDLVVNPSVRETFIKRTKITNSIREFLNNK 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 196 GYLEVETPILQPIPGGAA-ARPFLTH---HNALNIPLYLRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVN 158
           FA  +RN      H PEFTM+E Y A++ Y  +M     ++   A +       +  +  
Sbjct: 252 FAKDFRNEGMDRTHNPEFTMIELYVAYKDYNWMMGMTEQLLEKVAKDATGSTKVTVGDKE 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    + + +A   +   D+          +   L    ++  + V        + 
Sbjct: 312 IDFKAPYPRVPILDAIKTHTGFDVSAM-------NEAQLREVCKKLHLEVDESFGRGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E        T +  YP   S L   + + P  T+RFEL     EL NA  EL
Sbjct: 365 DEIFGEKCEHLYV--QPTFITDYPKEMSPLTKAHRSKPGLTERFELMVNGSELANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPI+QR RFE ++   +K  +E    ID DFL  L   MP +SGI +G DRLVM +T  
Sbjct: 423 NDPIDQRERFEHQLALAQKGDDEATQFIDYDFLRALEYGMPPTSGIGIGIDRLVMFMTNN 482

Query: 337 NNINEVIWTPFSQSNQEEI 355
           ++I EV++ P  +  +++I
Sbjct: 483 SSIQEVLFFPQMRPEKKQI 501


>gi|289450735|ref|YP_003475258.1| lysine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185282|gb|ADC91707.1| lysine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 660

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 168/370 (45%), Gaps = 27/370 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR               KR++I  +LR Y     F+E+++ 
Sbjct: 142 IRPLPEKFHGLQDMDTRYRRRYLDLIVNPEVRQTFAKRSIIIRTLRNYLDNIDFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LYL+ +PE   K+L+  G ++++     +RN 
Sbjct: 202 ILNVIPGGAA-ARPFITH---HNAMNIDLYLRIAPELYLKRLIVGGMDRVYEIGRQFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y+A   Y+ +M+    +I   A     +   +++ V+ +      
Sbjct: 258 GMDTKHNPEFTLLELYQAFTDYKGMMELTETLIYECAMAACGKTTVTWRGVDVDLKPPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y+ +D     D P           A +  + V       DIF+      +
Sbjct: 318 RLTMRDAVLQYSGVDFDQIKDLP------AAVAVATEHNLPVEPGMGRGDIFNLFFETYV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L    P  P  T+RFEL+ C  E  NA  EL DPI+QR 
Sbjct: 372 EDK--LVQPTFIYDYPIEISPLTKKKPGRPELTERFELFICGAEFANAYSELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++++++    E   +DED+   L   +P + G+ MG DRL ML+T + +I +V+  
Sbjct: 430 RFKAQLRKRELGDEEANRMDEDYCMALEYGLPPTGGMGMGIDRLTMLLTDSESIRDVLLF 489

Query: 346 PFSQSNQEEI 355
           P  +   + +
Sbjct: 490 PTMKPLSDGV 499


>gi|329896806|ref|ZP_08271722.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC3088]
 gi|328921561|gb|EGG28941.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC3088]
          Length = 494

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 155/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++     F+E+++ 
Sbjct: 140 LRPLPDKYHGLADQELRYRQRYVDLIVNDDVRARFKLRSKIVAYIRDFMEARGFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   +YL+ +PE   K+L   G E++F     +RN 
Sbjct: 200 MMQVIPGGAT-AKPFVTH---HNALDLDMYLRIAPELYLKRLTVGGFERVFEINRNFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y   M     +++    +V       +Q    +   E +
Sbjct: 256 GLSTRHNPEFTMLEYYWAYADYRDAMLLTEQMLQGLVGDVLGATTIDYQGHTLDFSGEFD 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             TV ++      +    TL      D       A+  GI V        +   I  + +
Sbjct: 316 RFTVFDSI-----LAHNPTLSAEQLADMAQACAFAESLGIDVKPTWGLGKVQIEIFEKTV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    +DP  T RFE +    EL N   EL D  +Q  
Sbjct: 371 EHR--LIQPTFITAYPTEVSPLARRSDSDPFVTDRFEFFVAGRELANGFSELNDAEDQAE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ EK     E    D D++  L   MP ++G  +G DRLVML+T + +I +V+  
Sbjct: 429 RFKAQVAEKDAGDEEAMHFDADYIRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PHMRPE 494


>gi|257066135|ref|YP_003152391.1| lysyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798015|gb|ACV28670.1| lysyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 631

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 89/372 (23%), Positives = 167/372 (44%), Gaps = 32/372 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              ++R+ I S +R +     F+E+++ 
Sbjct: 135 LQMLPEKWHGLKDPDLRYRQRYLDLIVNPEVKSVFVQRSQIISEIRRFLDGQGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F+T     + +   +YL+ + E   K+L+  G ++++     +RN 
Sbjct: 195 ILNTIAGGAT-ARPFTTH---HNSLNIGMYLRIASELYLKRLIVGGFDRVYEIGRMFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +E +M+   N++   A       +  F        +  +
Sbjct: 251 GMDATHNPEFTTMELYQAYGDFEDMMEITENMVEHVANKVKGTTVVEFDGNEIELKAPWK 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ +A   ++ +D        +          A++ G+ V    T  +I +    E +
Sbjct: 311 RISMIDAVKEHSGVDFN------EIKTDEEAIAIAKEKGVEVKE--TRGEIIAEFFDEFV 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFE +    E+ NA  EL D ++Q+ 
Sbjct: 363 EDK--LIQPTFIVDYPVEISPLAKRKNDDPSLTYRFEAFINGAEIANAFSELNDALDQKQ 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +++   +E   +D DF+  L   MP + G+ +G DRL+M++TG ++I +V+  
Sbjct: 421 RFLDQVAKREAGDDEAQMMDYDFVNALEIGMPPTGGLGIGIDRLIMILTGQHSIRDVLLF 480

Query: 346 PFSQS---NQEE 354
           P  +     +EE
Sbjct: 481 PTMKPIGLEKEE 492


>gi|320540120|ref|ZP_08039775.1| lysine tRNA synthetase, constitutive [Serratia symbiotica str.
           Tucson]
 gi|320029786|gb|EFW11810.1| lysine tRNA synthetase, constitutive [Serratia symbiotica str.
           Tucson]
          Length = 505

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 161/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I +S+R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANEGSRNTFKVRSQIMASMRNFMVERGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF-SEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  AE                F    E
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYNDLIELTESLFRTLAEKVLGTSLVQYGDEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA  +Y         D  D  D       A+  GI+V        + + I  E  
Sbjct: 326 KLSMTEAIKKY-----RPETDLADLADMGKTVAIAESIGIKVVKSWGLGRVVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDLNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +M  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQMNAKDAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|328675335|gb|AEB28010.1| Lysyl-tRNA synthetase (class II) [Francisella cf. novicida 3523]
          Length = 560

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R YF +  F+E+++ 
Sbjct: 206 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDKLDFMEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 266 MMHVLQGGAA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   ++  +     N   + E
Sbjct: 322 GVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEVLEYGEYKINFGGKYE 381

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 382 RISMVDSIVKY-----NDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETV 436

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA    ++P FT RFE +    E+ N   EL D  +Q  
Sbjct: 437 EHQ--LIQPTFITDYPAVVSPLARRQDSNPEFTDRFEFFIGAREVANGFSELNDAEDQAE 494

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   +P ++G  +G DRLVM +T + +I +VI  
Sbjct: 495 RFRKQVEAAASGDDEAMPYDKDYIRALEYGLPPTAGQGIGIDRLVMYLTNSQSIRDVILF 554

Query: 346 PFSQSN 351
           P  +  
Sbjct: 555 PHMKPE 560


>gi|242240699|ref|YP_002988880.1| lysyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242132756|gb|ACS87058.1| lysyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 505

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDDSRQTFRVRSQILAGIRQFMVGRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       + +   +     E
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTEVPYGDQTFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D          A+  G++V        I + I  +  
Sbjct: 326 KLTMREAIKKY-----RPETNLADLDSFDAAKAIAESIGVKVEKSWGLGRIVTEIFEDVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DRLVML T ++ I +VI  
Sbjct: 439 RFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRLVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|134302700|ref|YP_001122668.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134050477|gb|ABO47548.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 560

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + + +R YF    F+E+++ 
Sbjct: 206 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 266 MMHVLQGGAA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   +I  +     N   + E
Sbjct: 322 GVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYE 381

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 382 RISMVDSIVKY-----NDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETV 436

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 437 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFIGAREVANGFSELNDAEDQAE 494

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 495 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 554

Query: 346 PFSQSN 351
           P  +  
Sbjct: 555 PHMKPE 560


>gi|208780603|ref|ZP_03247942.1| lysyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743578|gb|EDZ89883.1| lysyl-tRNA synthetase [Francisella novicida FTG]
          Length = 560

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R YF    F+E+++ 
Sbjct: 206 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 266 MMHVLQGGAA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   +I  +     N   + E
Sbjct: 322 GVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYE 381

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 382 RISMVDSIVKY-----NDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETV 436

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 437 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFIGAREVANGFSELNDAEDQAE 494

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 495 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 554

Query: 346 PFSQSN 351
           P  +  
Sbjct: 555 PHMKPE 560


>gi|229917390|ref|YP_002886036.1| lysyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229468819|gb|ACQ70591.1| lysyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 496

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 163/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I S +R +  +  ++E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEQRYRQRYLDLITNQDSRQTFILRSRIISEIRNFLNQKGYLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LY++ + E   K+L+  G E+++     +RN 
Sbjct: 202 MLHTIAGGAA-ARPFLTH---HNALDMELYMRIAIELHLKRLIVGGLERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M     ++   A+ V       +     +     +
Sbjct: 258 GISTRHNPEFTMIELYEAYADYNDIMDLTEELVAHVAKEVLGTTDVQYGEDTIHLGIGWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +       +D    + + +          A++ G+ V    T+  I +    +K+
Sbjct: 318 RAHMVDLVKEETGVDFWQQMSDEE------ARALAKEHGVEVQDHMTFGHIVNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EET--LLQPTFVTGHPVEVSPLAKKNETDPRFTDRFELFIVRREHANAFTELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK+   +E + +D DFL  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 430 RFEAQLLEKEAGNDEAHELDNDFLEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 489

Query: 346 PFSQSNQ 352
           P  +  Q
Sbjct: 490 PTMRHQQ 496


>gi|22297756|ref|NP_681003.1| lysyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|34222748|sp|Q8DMA9|SYK_THEEB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|22293933|dbj|BAC07765.1| lysyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 506

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 162/367 (44%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR +I +++R Y  E  FIEI++ 
Sbjct: 146 LLPLPDKWHGLTDVEKRYRQRYVDLIVNPQVRDTFRKRALITAAIRRYLNEQGFIEIETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 206 VLQVEAGGA-EARPFIT---YHNTLEMQLYLRIATELHLKRLIVGGFEKVYELGRIFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II   A  V      ++Q    +      
Sbjct: 262 GISTKHNPEFTSIEVYQAYADYNDMMTLTEAIITTGAMEVLGTLKITYQGETIDLTPPWR 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
            +T+ +A      ID           D     + AQ+ G++     DT   + + +  + 
Sbjct: 322 RVTMHDAVLAATGIDFRQLG------DLTAAKIAAQKVGVKDLDTCDTIGRVLNEVFEQI 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP   S LA  + + P   +RFEL+    E  N+  EL DP++QR
Sbjct: 376 VEPT--LIQPTFVLDYPVEISPLAKPHRSQPGLVERFELFIVGREHANSFSELTDPLDQR 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E++ + K       + +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 434 QRLEEQARRKAAGDLAAHSVDEDFLTALEHGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 493

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 494 FPLLRPE 500


>gi|319639579|ref|ZP_07994326.1| lysyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399150|gb|EFV79824.1| lysyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 503

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     S+     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRAVNGTAKISYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDEEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    + P  T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIIDYPVEVSPLARASDSKPGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|227328401|ref|ZP_03832425.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 505

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + +++R + V+N F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFRIRSNVMAAIRRFMVDNGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+    N+ R    +V       + +   +     E
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGSTTVEYGDQTFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       AQ  GI++        I + I  E  
Sbjct: 326 KLTMREAICKY-----RPETNVADLDDLEKATAIAQSLGIKIEKSWGLGRIVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESS--LIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFAQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|255522650|ref|ZP_05389887.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
          Length = 429

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 75  LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETP 134

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 135 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 190

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      ++   N +      
Sbjct: 191 GTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYNVDLTPNWR 250

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A   Y  +D      + +          A++  + V    T+  I +      +
Sbjct: 251 RIHMADAVKEYVGVDFWNVTSDEE------ARELAKKHNVPVTEHMTYGHILNEFFETYV 304

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 305 EEK--LIQPTFVYGHPVEISPLAKKNKEDDRFTDRFELFIVGREHANAFSELNDPIDQRE 362

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  
Sbjct: 363 RFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLF 422

Query: 346 PFSQSN 351
           P  +  
Sbjct: 423 PTMKHR 428


>gi|167769659|ref|ZP_02441712.1| hypothetical protein ANACOL_00993 [Anaerotruncus colihominis DSM
           17241]
 gi|167668020|gb|EDS12150.1| hypothetical protein ANACOL_00993 [Anaerotruncus colihominis DSM
           17241]
          Length = 657

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 27/360 (7%)

Query: 6   SQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +    +D    YR+R              +KR+ I +++R +     +IE+++  L   
Sbjct: 155 EKWHGLKDTELRYRQRYVDLIVNPEVKDTFVKRSKIITAIRSFLEAKGYIEVETPVLHAI 214

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
            G     R F T     + +   +Y++ + E   K+L+  G +K++     +RN      
Sbjct: 215 AGGAA-ARPFITH---HNALDIDMYMRIALELHLKRLIVGGFDKVYEIGRVFRNEGIDTR 270

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVA 171
           H PEFT+LE Y A+  Y  +M     ++R  A          + +V  +     E +++ 
Sbjct: 271 HNPEFTLLELYEAYTDYHGMMDITEGLVRHCAHAVLGTGKIVYGDVEIDLDKPFERLSMR 330

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           EA  +Y+ +D                   A++  I         DI S    E  E +  
Sbjct: 331 EAVKKYSGVDFAQI------ETLEQARAIAKEHHIEYEQRHGKGDILSLFFEEYCEKH-- 382

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +     +  +P   S L+   P +P +T+RFEL+    E  NA  EL DPI+QR RFE +
Sbjct: 383 LIQPVFITDHPVDISPLSKRKPEEPEYTERFELFILGREHANAFSELNDPIDQRGRFEHQ 442

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              K    +E   IDEDFL  L   MP + G+ +G DRLVML+T + +I +V+  P  ++
Sbjct: 443 AALKAAGDDEANDIDEDFLTALEYGMPPTGGLGIGVDRLVMLLTNSASIRDVLLFPTMKT 502


>gi|78223563|ref|YP_385310.1| lysyl-tRNA synthetase, class-2 [Geobacter metallireducens GS-15]
 gi|78194818|gb|ABB32585.1| Lysyl-tRNA synthetase, class-2 [Geobacter metallireducens GS-15]
          Length = 491

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 106/365 (29%), Positives = 176/365 (48%), Gaps = 27/365 (7%)

Query: 3   QIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R              +KR+ I + +RE+ V + F+E+++  +
Sbjct: 139 PLPEKFHGLTDVETRYRQRYVDLIVNPEVREVFIKRSRIVNLIREFMVRHDFLEVETPMM 198

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q  PG  T  R F T     + +   L+L+ +PE   K+L+  G E++F     +RN   
Sbjct: 199 QPIPGGAT-ARPFVTH---HNALDMELFLRIAPELYLKRLVVGGFERVFEINRNFRNEGI 254

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYI 168
              H PEFTM+E+Y+A+ ++E LM     ++    + V     F++Q V  +     + +
Sbjct: 255 SVRHNPEFTMMEFYQAYATFEDLMDFTEELLCHVTQEVLGTLDFTYQGVEISFQRPWKRL 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           TV EA   Y +ID  +        DR L Y  A+  G+ +  D  +  + + I  E  E 
Sbjct: 315 TVKEAILEYGDIDAKS------LEDRDLAYAYARSIGLDLPTDVGYGKLITEIFEEVAEV 368

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP   S L+     DP    RFE +    E+ NA  EL DP++Q+ RF
Sbjct: 369 K--LIQPTFITAYPTEVSPLSRKSDKDPDIVDRFEFFCAGREMANAFSELNDPVDQKERF 426

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             ++ +K K   E + +DED++  L   MP ++G  +G DRLVML+T + +I +VI  P 
Sbjct: 427 LGQVAQKAKGDEEAHYMDEDYIRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPQ 486

Query: 348 SQSNQ 352
            +  +
Sbjct: 487 LRKEK 491


>gi|298207686|ref|YP_003715865.1| lysyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83850323|gb|EAP88191.1| lysyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 563

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 99/375 (26%), Positives = 169/375 (45%), Gaps = 36/375 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  + +++R +F + 
Sbjct: 136 LRPLPLPKKDKDGNVYDEFNDPELRYRQRYVDLVVNPKVKEVFVKRTKLFNAMRNFFNDA 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            + E+++  LQ  PG     + F +     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 196 GYFEVETPILQPIPGGAA-AKPFISH---HNALDIPLYMRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M+   N++   A   N K   +F    
Sbjct: 252 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMEFTENLLEHCAVAVNGKTEATFGEHT 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N  +    +T+ ++   +   D+              LY  A+  GI V        + 
Sbjct: 312 VNFKAPYARVTMTDSIKHFTGFDISG-------KTEKELYEAAKGMGIDVDETMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGEKCEGNY--IQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE +++   +  +E   ID+DFL  L   MP +SG+ +G DRL+M +T   
Sbjct: 423 NDPIDQRERFEAQLKLADRGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNQ 482

Query: 338 NINEVIWTPFSQSNQ 352
           +I EV++ P  +  +
Sbjct: 483 SIQEVLFFPQMKPEK 497


>gi|331268358|ref|YP_004394850.1| lysyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329124908|gb|AEB74853.1| lysyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 510

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 91/367 (24%), Positives = 160/367 (43%), Gaps = 24/367 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  ++RE+    +F+E+++ 
Sbjct: 153 LKPLPEKFHGLKDPDLRYRQRYVDLIMNEDVRETFMKRTAIIKAIREFLDNREFLEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 213 ILSPIAGGAA-AKPFITH---HNALDIDMYLRIATELYLKRLIVGGFEKVYEIGKNFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN-VNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N++    E  N            +      
Sbjct: 269 GIDIRHNPEFTAIELYEAYADYNDMMEITENMVAYVCEKVNGTTKVMYEGTEIDFKPPWR 328

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   +A +D      + +  +             +   D T  DI   +  E  
Sbjct: 329 RITMVDAVKEFAGVDFNEVNTDEEAREIAKGKEL---ELKKELKDCTKGDILVALFEEFG 385

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L      +   T+RFE +    E+CNA  EL DPI Q+ 
Sbjct: 386 EEK--LMQPTFVCDYPKENSPLTKKKRGNDALTERFEGFVYGREICNAYSELNDPIVQKE 443

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E++   +E Y +D+DF+  L   MP + G+ +G DRL+M +T +++I +VI  
Sbjct: 444 RFVQQLKERELGDDEAYMMDDDFINALEIGMPPTGGLGIGIDRLIMFLTDSSSIRDVILF 503

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 504 PTMKPTK 510


>gi|322831510|ref|YP_004211537.1| lysyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321166711|gb|ADW72410.1| lysyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 509

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 94/369 (25%), Positives = 160/369 (43%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R + VEN F+E+++ 
Sbjct: 152 LRPLPDKFHGLQDQEARYRQRYLDLIANEDSRKTFKIRSQIMSGIRSFMVENGFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 212 MMQVIPGGAA-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R     V    +  + +   +      
Sbjct: 268 GVSPRHNPEFTMMELYMAYADYKDLIVLTETLFRTLTESVLGSSVVQYGDQTFDFGKPFA 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  GI++        I + I  E  
Sbjct: 328 KLTMREAICKY-----RPETNVADLDDLAKATAIAESLGIKIEKSWGLGRIVTEIFEETA 382

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 383 EAQ--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 440

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 441 RFADQVSAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 500

Query: 346 PFSQSNQEE 354
           P  +   ++
Sbjct: 501 PAMRPQTQK 509


>gi|212637922|ref|YP_002314442.1| lysyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212559402|gb|ACJ32457.1| Lysyl-tRNA synthetase (class II) [Anoxybacillus flavithermus WK1]
          Length = 494

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R++I  S+R Y  +  ++E+++ 
Sbjct: 141 LRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFITRSLIIQSMRRYLDQKGYLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 201 MMHSIAGGAA-ARPFITH---HNALDMTLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y  +M+   ++I   A+ V       +     +     +
Sbjct: 257 GISTRHNPEFTMLELYEAYADYTDIMRLTEDMIAHIAQEVLGTTKIQYGEHEVDLTPSWK 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A   Y  +D    + + +          A++ G+ VA   T+  I +    +K+
Sbjct: 317 RLHMVDAIKDYVGVDFWKHMSDEE------ARQLAKEHGVEVAPHMTFGHIVNEFFEQKV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 371 EQH--LIQPTFIYGHPVEISPLAKKNPEDPRFTDRFELFIVAREHANAFTELNDPIDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++EK++  +E + +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 429 RFEAQLREKEQGNDEAHEMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PQMRHK 494


>gi|323438751|gb|EGA96491.1| lysyl-tRNA synthetase [Staphylococcus aureus O11]
          Length = 495

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 162/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A  V       +     +  S   
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWT 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        +          A++ GI +     +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVD------FYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 372 EET--LIQPTFIYGHPTEISPLAKKNPEDTRFTDRFELFIVGREHANAFTELNDPIDQKG 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|302876581|ref|YP_003845214.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307687256|ref|ZP_07629702.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302579438|gb|ADL53450.1| lysyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 508

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 168/367 (45%), Gaps = 30/367 (8%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I +++REY  ++ +IE+++ 
Sbjct: 151 LRPLPEKYHGLKDTDLRYRQRYVDLIMNPEVKETFMKRSAIITAMREYLDQHAYIEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 211 ILSPIAGGAA-ARPFVTH---HNSLDIDMYLRIATELYLKRLIVGGFEKVYEIGRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    N++     +V      ++Q    +      
Sbjct: 267 GISVRHNPEFTMIELYEAYADYNDMMVLTENMVAYICKKVLGTTKVTYQGTEIDFTPPWR 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD---DTWSDIFSRILI 223
            IT+ +A   YA +D        +          A++  + +  +    T  +I + +  
Sbjct: 327 RITMVDAVKEYAGVDFN------EIKTDEEARQIAKEKHLELKKELKYYTKGEILNELYE 380

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
              E ++     T +  YP   S L      +  FT+RFE +    ELCNA  EL DPI 
Sbjct: 381 AFGEEHM--IQPTFIYDYPVEISPLTKKKRGNEAFTERFEGFVFGRELCNAYSELNDPIV 438

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RF ++++E++   +E Y +D+DF+  L   MP + G+ MG DRLVM +T + +I +V
Sbjct: 439 QKERFLQQLKEREHGDDEAYMMDDDFITALEIGMPPTGGMGMGIDRLVMFLTDSASIRDV 498

Query: 343 IWTPFSQ 349
           +  P  +
Sbjct: 499 LLFPTMK 505


>gi|254468124|ref|ZP_05081530.1| lysyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207086934|gb|EDZ64217.1| lysyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 503

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 167/366 (45%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              L R+    S+RE+ V N+F+E+++ 
Sbjct: 149 LRPMPEKFHGLQDQEMKYRQRYVDLMVNQETKDTFLTRSKAIQSIREFMVSNKFLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  +  + F T     + +   ++++ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MLHPIPGGAS-AKPFVTH---HNALDMEMFMRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM    + IR +          ++Q+   +     +
Sbjct: 265 GLSVRHNPEFTMMEFYAAYADYQWLMTFTEDCIRSSITGCGVDLKLTYQDKEIDFSQPFD 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y          + D  +   +    Q+ G  +  + +   +   +     
Sbjct: 325 RLTLVQAIEKY-----NNQFKSEDLLNAEFIEQTLQKMGEELPPNRSLGSLQLALFEVVA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     DP  T+RFEL+    E+ N   EL DP EQ  
Sbjct: 380 EEH--LWNPTFIIDYPTEVSPLARASDNDPTITERFELFIAGREIANGFSELNDPEEQSE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+K++++K+   +E    D DF+  L   MP + G  +G DRL+ML+T   +I +VI  
Sbjct: 438 RFKKQVEQKEAGDDEAMYYDADFIRALEYGMPPTGGCGIGIDRLIMLITNKPSIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PHMRPE 503


>gi|313886734|ref|ZP_07820441.1| lysine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923775|gb|EFR34577.1| lysine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 579

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 104/373 (27%), Positives = 161/373 (43%), Gaps = 35/373 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YRRR              +KR  I  S+R +F    
Sbjct: 144 LRPLPIVKAKDDQVFDGFTDPELRYRRRYVDLIVNDEVKGIFIKRTKIFQSMRNFFNARG 203

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           ++E+D+  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G E ++ F
Sbjct: 204 YLEVDTPVLQSIPGGAA-ARPFVTH---HNALDIPLYLRIANELYLKRLIVGGFEGVYEF 259

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNC 159
           +  +RN      H PEFT +E Y A++ Y  +M+    +I    + V             
Sbjct: 260 SRNFRNEGMDRTHNPEFTCMEIYVAYKDYRWMMQMTEQMIEHICQEVLGSTTIQVGEHTI 319

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                   +T+ +A   Y  +       N D  D   L    Q  G+ +        +  
Sbjct: 320 EFKPPYRRLTMIDAIQEYGGV-------NIDGMDEAELRKVCQSKGVEIDDTMGIGKLID 372

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            +     EP+  +   T +  YP   S L   +      T+RFEL+    EL NA  EL 
Sbjct: 373 ELFGAVAEPH--LVQPTFIIDYPKAMSPLTKEHRDRSDLTERFELFVNGKELANAYSELN 430

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+QRHRFE +++  ++  +E   ID DFL  L   MP +SG+ +G DRLVML+TG  +
Sbjct: 431 DPIDQRHRFEDQLRLSERGDDEAMYIDHDFLRALEFGMPPTSGMGIGMDRLVMLLTGQES 490

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 491 IQEVLLFPQMRPE 503


>gi|213961690|ref|ZP_03389956.1| lysyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213955479|gb|EEB66795.1| lysyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 562

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 99/378 (26%), Positives = 170/378 (44%), Gaps = 36/378 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR R              +KR  + +++R++F + 
Sbjct: 135 LRPLPMPKVDADGKVHDAFTDPEQRYRMRYVDLVVNPHVKEVFIKRTKLFNAMRQFFNDA 194

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ  PG  +  R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 195 GYLEVETPVLQAIPGGAS-ARPFITH---HNALDIPLYMRIANELYLKRLIVGGFDGVYE 250

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M     ++   A   N     +F    
Sbjct: 251 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYHWMMNFTERLLEHCAMAVNGTTKATFGKHE 310

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    +T+ +A   +   D+              L   A   GI V        + 
Sbjct: 311 VDFKAPYPRVTMTDAIKHFTGFDITG-------KTEEELRAFAHSIGIAVDETMGKGKLI 363

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 364 DEIFGEKCEGN--FIQPTFITDYPKEMSPLTKEHRDNPALTERFELMVCGKEIANAYSEL 421

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE++++  +K  +E   ID+DFL  L   MP +SG+ +G DRL+M +T   
Sbjct: 422 NDPIDQRERFEEQLRLSEKGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNE 481

Query: 338 NINEVIWTPFSQSNQEEI 355
           +I EV++ P  +  ++ +
Sbjct: 482 SIQEVLFFPQMRPEKKAV 499


>gi|254520542|ref|ZP_05132598.1| lysyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914291|gb|EEH99492.1| lysyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 501

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 24/367 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I   +RE+     FIE+++ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQREVDMISNPEVKTNFMKRATILKGVREFLDNRGFIEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     + +   +YL+ +PE   K+ + AG EK++     +RN 
Sbjct: 204 MLAPIAGGAS-ARPFITH---HNTLDIDMYLRIAPELYLKRCIVAGLEKVYDMGRTFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A   Y  +M+   N+I     +V      ++Q    +      
Sbjct: 260 GMSVRHNPEFTMIELYEAFSDYNDMMEIAENMIASVCEKVNGTTKVNYQGTEIDFAPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   +  ID      + +            +  I+     T  ++ + +  E  
Sbjct: 320 RITMVDAVKEHTGIDFNEIKSDEEAQAIAKEKNLEFKKNIK---HVTKGEVLNVLFEEYA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E ++     T +  YP   S L      + +FT+RFE +    E+CNA  EL DPI QR 
Sbjct: 377 EQHM--IQPTFICDYPVEISPLTKKKRGNDKFTERFEGFVFGREICNAYSELNDPIVQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ +E++   +E Y IDE+F++ L   MP + G+ +G DR++M +T + +I +VI  
Sbjct: 435 RFNQQEKERELGDDEAYMIDEEFMSALETGMPPTGGLGIGIDRVIMFLTDSASIRDVIMF 494

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 495 PTMKPQK 501


>gi|325955446|ref|YP_004239106.1| Lysyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323438064|gb|ADX68528.1| Lysyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 564

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 95/377 (25%), Positives = 167/377 (44%), Gaps = 36/377 (9%)

Query: 1   MHQIPS----------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR R               KR  +  ++R++F   
Sbjct: 133 LRPLPIVKTDDDGHVFDAFVDPELRYRMRYVDLVVNPHVKTIFQKRTKLFQAMRDFFNAR 192

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 193 GYLEVETPILQSIPGGAA-ARPFITH---HNALDIPLYLRIANELYLKRLIVGGFDGVYE 248

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M     ++   A         +F    
Sbjct: 249 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTEQLLEHCAIAVNGSTKATFGEHE 308

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +  + +T+ ++   +   D+       +      L   A + GI V        + 
Sbjct: 309 IDFKAPYKRVTMRQSIIDFTGFDI-------EGKTEEELRKAALEMGIAVDETMGKGKLI 361

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  + + T+RFEL  C  E+ N+  EL
Sbjct: 362 DEIFGEKCEGNY--IQPTFITDYPKAMSPLTKKHRDNEQLTERFELMVCGKEIANSYSEL 419

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE++++  +K  +E   ID+DFL  L   MP ++G+ +G DRL+M +T   
Sbjct: 420 NDPIDQRERFEEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGMDRLLMYLTNNP 479

Query: 338 NINEVIWTPFSQSNQEE 354
           +I EV++ P  +  ++ 
Sbjct: 480 SIQEVLFFPQMRPEKKA 496


>gi|314937276|ref|ZP_07844618.1| lysine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654572|gb|EFS18322.1| lysine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 496

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 167/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +  ++E+++ 
Sbjct: 143 LRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTRTFINRSKIIQEMRNYLNQRGYLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 203 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A+         +     +  S+ +
Sbjct: 259 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRYIAQTVLGSAKVQYNGEEIDLESDWK 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      ++      +            A+  GI +  +  +  I +    +K+
Sbjct: 319 RLHIVDAVKEATGVNFYNVKTD------EEAKALAKAHGIEITENMRYGHILNEFFEQKV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 373 EET--LIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK++  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 431 RFEAQLVEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 490

Query: 346 PFSQ 349
           P+ +
Sbjct: 491 PYMR 494


>gi|289422449|ref|ZP_06424292.1| lysine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289157021|gb|EFD05643.1| lysine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 637

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 169/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              L R     +LR Y  +  F+E+++ 
Sbjct: 142 LQVLPEKYHGLKDVDLRYRQRYVDLIVNPEVKEAFLTRTKALKALRSYLDDRGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +  P+YL+ + E   K+L+  G +K++     +RN 
Sbjct: 202 ILNTIAGGA-NARPFITH---HNTLDIPMYLRIANELYLKRLIVGGFDKVYEMGRMFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PE+T +E Y+A+  Y+ +M+   N+I   AEVA       +Q    +     +
Sbjct: 258 GMDMKHNPEYTAIELYQAYADYKDMMEITENVISHMAEVATGSMKIDYQGTEIDFTPPWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E    YA +D      + +          A++ GI +       ++ +    E  
Sbjct: 318 RMTMEECVKEYAGVDFSEINTDEEAL------AIAREKGIEITPGMRRGEVINAFFEEFG 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPR T RFE +A   EL NA  EL DPI+QR 
Sbjct: 372 EDQ--LIQPTFITHHPVEVSPLAKRNVEDPRRTDRFEAFANRWELANAFSELNDPIDQRG 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++++++   +E   +DEDFL  L   +P + G+ +G DR++ML+T +  I +V+  
Sbjct: 430 RFEDQVRKRELGDDEACEMDEDFLNALEVGLPPTGGLGIGIDRVIMLLTNSTTIRDVLLF 489

Query: 346 PFSQSNQE 353
           P  +  ++
Sbjct: 490 PTMKPLRD 497


>gi|74314615|ref|YP_313034.1| lysyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|73858092|gb|AAZ90799.1| lysine tRNA synthetase, inducible [Shigella sonnei Ss046]
          Length = 505

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIITEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|261392312|emb|CAX49838.1| lysyl-tRNA synthetase (lysine--tRNA ligase; LysRS) [Neisseria
           meningitidis 8013]
          Length = 503

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRAVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILDAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    + P  T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIIDYPVEVSPLARASDSKPGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|160881676|ref|YP_001560644.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160430342|gb|ABX43905.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 503

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 105/365 (28%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R Y     FIE+++ 
Sbjct: 148 LQVLPEKFHGLTDTDTRYRQRYVDLMMNPEVKETFIKRSAIIREIRNYLDGEDFIEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + L L+ S E   K+L+  G E+++     +RN 
Sbjct: 208 VLVKNAGGAA-ARPFMTH---HNSLDEDLNLRISLELYLKRLIVGGLERVYEIGRVFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y+A+  Y  +M     + R  AE        S++ V  +     E
Sbjct: 264 GLSVRHNPEFTLLELYQAYTDYNGMMDLTEKLFRTVAEKVIGTTKISYEGVEIDLGKPFE 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ EA  +Y  ID                   A++  +         DI S    E +
Sbjct: 324 RITMVEAVKKYKGIDFDQV------KTEEEAKALAKEHHVSFEDRHKKGDILSLFFEEFV 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFEL+    E+ NA  EL DPI+QR 
Sbjct: 378 EEH--LIQPTFVIDHPVEISPLTKKKPENPEYTERFELFVTKREMANAYSELNDPIDQRE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +   K     E   +DEDFL  L   MP + GI +G DRLVML+T ++ I +V+  
Sbjct: 436 RFVAQEALKAAGDEEANSMDEDFLNALAYGMPPTGGIGIGIDRLVMLLTDSSAIRDVLLF 495

Query: 346 PFSQS 350
           P  +S
Sbjct: 496 PTMKS 500


>gi|222152138|ref|YP_002561298.1| lysyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222121267|dbj|BAH18602.1| lysyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 495

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 163/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITSDESTQTFITRSKIIQEMRSYLNAKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHTIAGGAA-ARPFVTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M     ++   AE        ++         +  
Sbjct: 258 GISTRHNPEFTMIELYEAYADYNDIMDLTEEMVAYIAEKVTGSTTVTYDGEEIQLAPKWR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +A   +  +D      +         +  A++ G+ V  +  +  + +    +K+
Sbjct: 318 RWHMVDAVKEFTGVDFYNVNTD------EEAHTLAKEHGVEVKPNMKYGHVLNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 372 EEH--LVQPTFIYGHPVEVSPLAKQNPEDKRFTDRFELFIVRREHANAFTELNDPIDQKQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +M+EK +  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFLAQMEEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVLLF 489

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 490 PYMRHK 495


>gi|212696519|ref|ZP_03304647.1| hypothetical protein ANHYDRO_01057 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676455|gb|EEB36062.1| hypothetical protein ANHYDRO_01057 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 639

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 87/365 (23%), Positives = 161/365 (44%), Gaps = 29/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              + R+ I S +R +     F+E+++ 
Sbjct: 138 LQILPEKWHGLKDPDIRYRQRYVDLIVNPEVKNVFVLRSKIISEIRRFLENRGFLEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F T     + +   +YL+ + E   K+L+  G +K++     +RN 
Sbjct: 198 ILNTIAGGAT-ARPFITH---HNSLDIGMYLRIASELYLKRLIVGGFDKVYEIGRMFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +E +M+    ++   A       +  F        +   
Sbjct: 254 GMDATHNPEFTTMELYQAYGDFEDMMEITETMVEDVANKVKGSTVVEFDGNEIELKAPWR 313

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +A   Y+ +D     +  D          A++  + V   D+  +I +    E +
Sbjct: 314 RVSMIDAVKEYSGVDFNEITEYED------AVKIAKEKDVEVK--DSRGEIIAEFFDEFV 365

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFE +    E+ NA  EL D ++Q+ 
Sbjct: 366 EDK--LIQPTFIVDYPVEISPLAKRKNDDPSLTYRFEAFINGSEIANAFSELNDAVDQKE 423

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +++   +E   +D DF+  L   MP + G+ +G DRL+M++TG ++I +V+  
Sbjct: 424 RFLDQVAKREAGDDEAQMMDYDFVNALEVGMPPTGGLGIGIDRLIMILTGQHSIRDVLLF 483

Query: 346 PFSQS 350
           P  + 
Sbjct: 484 PTMKP 488


>gi|289433583|ref|YP_003463455.1| lysyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169827|emb|CBH26365.1| lysyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 498

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 165/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      ++   + +   +  
Sbjct: 260 GTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCEQVNGTTKITYGEYDVDLTPKWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A   Y  +D      + +       +  A++  + V    T+  I +      +
Sbjct: 320 RIHMADAVKEYVGVDFWNVTSDEE------AHQLAKEHNVPVTKHMTYGHILNEFFETFV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  
Sbjct: 432 RFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PTMKHR 497


>gi|56707357|ref|YP_169253.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669827|ref|YP_666384.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254370939|ref|ZP_04986944.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874191|ref|ZP_05246901.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56603849|emb|CAG44825.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320160|emb|CAL08208.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569182|gb|EDN34836.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840190|gb|EET18626.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
          Length = 576

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + + +R YF    F+E+++ 
Sbjct: 222 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETP 281

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 282 MMHVLQGGGA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 337

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   +I  +     N   + E
Sbjct: 338 GVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYE 397

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 398 RISMVDSIVKY-----NDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETV 452

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 453 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFIGAREVANGFSELNDAEDQAE 510

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 511 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 570

Query: 346 PFSQSN 351
           P  +  
Sbjct: 571 PHMKPE 576


>gi|284041217|ref|YP_003391147.1| lysyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283820510|gb|ADB42348.1| lysyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 583

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 96/381 (25%), Positives = 174/381 (45%), Gaps = 40/381 (10%)

Query: 1   MHQIP--------------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREY 35
           +  +P                 + + +  YR+R              +KR  + +S+R++
Sbjct: 148 LRPLPVVKEVVNEKGEKETYDAFTDPEQRYRQRYVDLIVNPQVRDVFIKRTKLVNSIRQF 207

Query: 36  FVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEE 95
             E  ++E+++  LQ   G     R F T     + +   LY++ + E   K+L+  G +
Sbjct: 208 LSEKGYLEVETPILQPIHGGAA-ARPFRTH---HNSLDMTLYMRIANELYLKRLIVGGYD 263

Query: 96  KIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSF 154
            +F FA  +RN      H PEFT +E+Y A++ Y  +M     ++ + A +VA     + 
Sbjct: 264 GVFEFAKDFRNEGMDRTHNPEFTQVEFYVAYKDYLWMMDTIEEMVEKVALDVAGTTKVTV 323

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
                +     + +T+ EA   Y  +D+          +   L   A+Q GI+V      
Sbjct: 324 GENVIDFKRPWKRLTMFEAIQEYTGVDVSAM-------EEDELRQVAEQRGIKVDSTMGK 376

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
           S +   +  +  EPN  +   T +  YP   S L   + + P   +RFE      E+ NA
Sbjct: 377 SKLIDELFGDACEPN--LIQPTFITDYPVEMSPLTKKHRSKPGLVERFEAICNGKEIANA 434

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLV 333
             EL DPI+QR RFE++++  ++   E   +DEDFL  L   MP ++G+ +G DRL M++
Sbjct: 435 YSELNDPIDQRERFEEQLRLAERGDEEAMALDEDFLRALEYGMPPTAGVGLGIDRLSMIM 494

Query: 334 TGANNINEVIWTPFSQSNQEE 354
           T  ++I +V++ P  +  +++
Sbjct: 495 TNQSSIQDVLFFPQMRPEKKQ 515


>gi|228476210|ref|ZP_04060913.1| lysine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228269695|gb|EEK11194.1| lysine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 496

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 168/364 (46%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +  ++E+++ 
Sbjct: 143 LRPLPDKFHGLQDIEQRYRQRYLDLITNQDSTRTFINRSKIIQEMRNYLNQRGYLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 203 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A+         +     +  S+ +
Sbjct: 259 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQTVLGSAKVQYNGEEIDLESDWK 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      ++      + +          A+  GI +  +  +  I +    +K+
Sbjct: 319 RLHIVDAVKEATGVNFYNVKTDEE------AKALAKAHGIEITENMKYGHILNEFFEQKV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 373 EET--LIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK++  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 431 RFEAQLVEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 490

Query: 346 PFSQ 349
           P+ +
Sbjct: 491 PYMR 494


>gi|88706909|ref|ZP_01104608.1| Lysyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88698831|gb|EAQ95951.1| Lysyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 499

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R++    +F+E+++ 
Sbjct: 145 LRPLPDKYHGLADQELRYRQRYVDLIVNESSRDVFRTRSKVISYIRKFMDAREFMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     + F T     + +   +YL+ +PE   K+L   G E+++     +RN 
Sbjct: 205 MMQPIPGGAA-AKPFVTH---HNALDLTMYLRIAPELYLKRLTVGGFERVYEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y   M     ++R    EV   +  ++Q    +      
Sbjct: 261 GLSTRHNPEFTMLEYYWAYADYRDAMDLTEAMLRGLTEEVLGTQQVTYQGQVFDFSKPFA 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV +     A +    +L   D  +R      A+  GI V+       I   I  +  
Sbjct: 321 RMTVID-----AILAHNPSLSAADIAERETAKGVAEGLGIEVSDAWGLGKIQIEIFEKTA 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFE +    EL N   EL D  +Q  
Sbjct: 376 EHR--LEQPTFITAYPTEVSPLARRNDEDPFVTDRFEFFVAGRELANGFSELNDAEDQAQ 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++++K     E    D D++  L   MP ++G  +G DRLVML+T + +I +V+  
Sbjct: 434 RFQEQVEQKDAGDEEAMHFDADYVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPE 499


>gi|303242487|ref|ZP_07328967.1| lysyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302589955|gb|EFL59723.1| lysyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 506

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 171/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              + R+MI  ++R++  E  F+E+D+ 
Sbjct: 152 LQPLPEKWHGLTNVDLRYRQRYVDLIVNPEVRDTFIVRSMIIKAIRKFLDERGFLEVDTP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 212 LLNTIPGGAA-AKPFITH---HNTLDIDMYLRIAPELYLKRLIVGGLERVYEMGRMFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y A+  Y+ +M     +I   A+ V      ++Q    +      
Sbjct: 268 GMSVKHNPEFTLMEVYEAYTDYKGMMDLSEQLISTVAKEVLGTTKINYQGQEIDLTPPWN 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +YA ++      +            A++  + +  + T  ++ + +  E  
Sbjct: 328 RMTMIEAVEKYAGVNFNNITSD------EEARNIAKEKKLHIEGNPTKGEVLNLMFEEFA 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S L    P  P FT+RFEL+  + E+ NA  EL DPI+Q+ 
Sbjct: 382 EEH--LIQPTFIMDYPVEVSPLTKRKPDMPSFTERFELFITSREMANAYSELNDPIDQKG 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++++++    E   +DEDF+  L   MP + G+ +G DRL+ML+T + +I +++  
Sbjct: 440 RFLSQVEKREAGDEEANMMDEDFITALEYGMPPTGGLGIGIDRLIMLLTDSYSIRDILLF 499

Query: 346 PFSQSN 351
           P  +  
Sbjct: 500 PTMKPR 505


>gi|254513974|ref|ZP_05126035.1| lysyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219676217|gb|EED32582.1| lysyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 499

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 158/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R++     F+E+++ 
Sbjct: 145 LRPLPDKYHGLADQELRYRQRYVDLIVNERSREVFRIRSRVISYIRKFMDGRDFMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     + F T     + +   +YL+ +PE   K+L   G E+++     +RN 
Sbjct: 205 MMQPIPGGAA-AKPFVTH---HNALDLTMYLRIAPELYLKRLTVGGFERVYEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y+  M    +++R    EV   +  ++Q    +      
Sbjct: 261 GLSTRHNPEFTMLEYYWAYADYQDAMDLTEHMLRGLTQEVLGSQQVNYQGQVFDFSQPFA 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV EA   Y       +L   D  +R L    A+  GI V        I   I  +  
Sbjct: 321 RMTVTEAILAY-----NPSLSMADIAERELARRVAEGLGIEVHTSWGLGKIQIEIFEKTA 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFE +    EL N   EL D  +Q  
Sbjct: 376 EHR--LEQPTFITAYPTEVSPLARRNDDDPFVTDRFEFFVAGRELANGFSELNDAEDQAQ 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K     E    D D++  L   MP ++G  +G DRLVML+T + +I +V+  
Sbjct: 434 RFKDQVAQKDAGDEEAMHFDADYVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPE 499


>gi|46906461|ref|YP_012850.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|226222857|ref|YP_002756964.1| lysyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254826414|ref|ZP_05231415.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254854616|ref|ZP_05243964.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254933690|ref|ZP_05267049.1| lysyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254992593|ref|ZP_05274783.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|300766503|ref|ZP_07076451.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|67461802|sp|Q724I4|SYK_LISMF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|46879725|gb|AAT03027.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225875319|emb|CAS04016.1| lysyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|258608011|gb|EEW20619.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293585254|gb|EFF97286.1| lysyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293595655|gb|EFG03416.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300512785|gb|EFK39884.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|332310639|gb|EGJ23734.1| Lysyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 498

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      ++   N +      
Sbjct: 260 GTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYNVDLTPNWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A   Y  +D      + +          A++  + V    T+  I +      +
Sbjct: 320 RIHMADAVKEYVGVDFWNVTSDEE------ARELAKKHNVPVTEHMTYGHILNEFFETYV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LIQPTFVYGHPVEISPLAKKNKEDDRFTDRFELFIVGREHANAFSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  
Sbjct: 432 RFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PTMKHR 497


>gi|193067810|ref|ZP_03048776.1| lysyl-tRNA synthetase LysU [Escherichia coli E110019]
 gi|192958785|gb|EDV89222.1| lysyl-tRNA synthetase LysU [Escherichia coli E110019]
          Length = 505

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|332882681|ref|ZP_08450293.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679481|gb|EGJ52466.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 562

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 100/378 (26%), Positives = 171/378 (45%), Gaps = 36/378 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR R              +KR  + +++R++F E 
Sbjct: 135 LRPLPMPKVDADGKVHDAFTDPEQRYRMRYVDLVVNPQVKEVFIKRTKLFNAMRQFFNEA 194

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ  PG  +  R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 195 GYLEVETPVLQAIPGGAS-ARPFITH---HNALDIPLYMRIANELYLKRLIVGGFDGVYE 250

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M     ++   A   N     +F    
Sbjct: 251 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTERLLEHCAIAVNGTTKATFGAHT 310

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    +T+ +A  ++   D+              L   A   GI V        + 
Sbjct: 311 VDFKAPYPRVTMTDAIKQFTGFDITG-------KTEEELRAFAHSIGIAVDETMGKGKLI 363

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 364 DEIFGEKCEGN--FIQPTFITDYPKEMSPLTKEHRDNPELTERFELMVCGKEIANAYSEL 421

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE++++  +K  +E   ID+DFL  L   MP +SG+ +G DRL+M +T   
Sbjct: 422 NDPIDQRERFEEQLRLSEKGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNE 481

Query: 338 NINEVIWTPFSQSNQEEI 355
           +I EV++ P  +  ++ +
Sbjct: 482 SIQEVLFFPQMRPEKKGV 499


>gi|254360791|ref|ZP_04976939.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153091361|gb|EDN73335.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 500

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 162/364 (44%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R++F+E  FIE+++ 
Sbjct: 146 LRPLPDKHHGLTDLETRYRQRYLDLISNEESRRTFMIRSQVVSGIRKFFLERDFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-AKPFITH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++       + +   +     E
Sbjct: 262 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRQLALDILGTTDVPYGDYVFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y N      +   D          A+  GI +        + + I  E  
Sbjct: 322 RITMHDAIVKYGN-----GIQREDLDSFEKSVEIAKGLGIEIQKSWGLGSVVNAIFEEVA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 377 EHQ--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DEDF+  L   +P ++G  +G DRLVM+   A +I +VI  
Sbjct: 435 RFDAQVAAKDAGDDEAMFKDEDFIVALEHGLPPTAGEGLGIDRLVMIFANAPSIRDVILF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PAMR 498


>gi|1311301|pdb|1LYL|A Chain A, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
           Lysine
 gi|1311303|pdb|1LYL|B Chain B, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
           Lysine
 gi|1311305|pdb|1LYL|C Chain C, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
           Lysine
 gi|9954996|pdb|1E1O|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal For, Complexed With
           L
 gi|9954997|pdb|1E1T|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
           T Lysyl_adenylate Intermediate
 gi|9954998|pdb|1E22|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
           Lysine And The Non-Hydrolysable Atp Analogue Amp-Pcp
 gi|9954999|pdb|1E24|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
           Lysine And Atp And Mn2+
          Length = 504

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 149 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 265 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 325 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 380 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 438 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 497

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 498 PAMRPQK 504


>gi|283853281|ref|ZP_06370531.1| lysyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571321|gb|EFC19331.1| lysyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 529

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 160/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +    +D    YR+R                R  I   LR +     F+E+++ 
Sbjct: 171 MRPLPEKFHGLKDVETRYRQRYVDLIVTPKAVEIFKARTTIVRELRAFLDTAGFMEVETP 230

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   L+L+ +PE   K+LL  G EK++     +RN 
Sbjct: 231 MMQAIPGGAT-AKPFVTH---HNALDMGLFLRIAPELYLKRLLVGGFEKVYEVGRNFRNE 286

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM E+Y A+  Y  LM     +    A       + ++Q    N      
Sbjct: 287 GVSTRHNPEFTMCEFYWAYARYTDLMDLTERLFSHLARAVTGGDVVTYQGQEINLGLGWT 346

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +   ++  +   I            D        +++G +V   +    + +++    +
Sbjct: 347 RLAFHDSLEKVGGISPDVYR------DFDAAKALVEKSGEKVLKGEKLGKVQAKLFDIFV 400

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +     +  YP   S L+     DP  T RFEL+ C  E+ NA  EL DP++QR 
Sbjct: 401 EPK--LLQPHFIYHYPTEISPLSRRNSEDPTITDRFELFICGREMANAFSELNDPVDQRL 458

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++EK+   +E + +D+D++  L   MP ++G  +G DRLVML+T   +I EVI  
Sbjct: 459 RFEDQVREKEAGDDEAHRMDDDYVRALEYGMPPAAGEGIGIDRLVMLLTDQASIREVILF 518

Query: 346 PFSQSN 351
           P  +  
Sbjct: 519 PLLRPE 524


>gi|75909357|ref|YP_323653.1| lysyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|123731434|sp|Q3M8C8|SYK_ANAVT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|75703082|gb|ABA22758.1| Lysyl-tRNA synthetase, class-2 [Anabaena variabilis ATCC 29413]
          Length = 561

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 159/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I + +R Y  +  F+EI++ 
Sbjct: 144 LLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 204 VLQSETGGA-DARPFIT---YHNTLEMELYLRIATELHLKRLIVGGFEKVFELGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II   A+ V      ++Q    +      
Sbjct: 260 GISTRHNPEFTSIEIYQAYADYNDMMALTEGIITTVAQDVLGTLQITYQGETVDLTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEK 225
            +T+ +    Y  +D  +     +          ++ AGI  V    T   I +    EK
Sbjct: 320 RVTMHDLVKEYTGLDFHSFQTLEEAKS------ASKNAGIPGVDEAQTIGKILNLAFEEK 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E N  +   T +  YP   S LA  + + P   +RFEL+    E  N+  EL DPI+QR
Sbjct: 374 VEAN--LIQPTFVIDYPVEISPLAKPHRSQPGLVERFELFIVGRETANSFSELTDPIDQR 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +  +K     E   +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 432 ERLEAQAAKKAAGDLEAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIA 491

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 492 FPLLKPE 498


>gi|17231563|ref|NP_488111.1| lysyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|39932230|sp|Q8YPW9|SYK_ANASP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|17133206|dbj|BAB75770.1| lysyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 561

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 157/367 (42%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I + +R Y  +  F+EI++ 
Sbjct: 144 LLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 204 VLQSEAGGA-DARPFVT---YHNTLEMELYLRIATELHLKRLIVGGFEKVFELGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II   A+ V      ++Q    +      
Sbjct: 260 GISTRHNPEFTSIEVYQAYADYNDMMALTEGIITTVAQDVLGTLQITYQGETVDLTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEK 225
            +T+ +    Y  +D  +     +           + AGI  V    T   I +    EK
Sbjct: 320 RVTMHDLVKEYTGLDFHSFQTLEEAKS------AGKNAGIPGVDEAQTIGKILNLAFEEK 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  + + P   +RFEL+    E  N+  EL DPI+QR
Sbjct: 374 VETK--LIQPTFVIDYPVEISPLAKPHRSQPGLVERFELFIVGRETANSFSELTDPIDQR 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +  +K     E   +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 432 ERLEAQAAKKAAGDLEAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIA 491

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 492 FPLLKPE 498


>gi|86605053|ref|YP_473816.1| lysyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86553595|gb|ABC98553.1| lysyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 508

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 154/369 (41%), Gaps = 25/369 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    RD    YR+R             LL R  I  SLR+   E  F+EI++ 
Sbjct: 148 LLPLPDKWHGLRDVEKRYRQRYVDLIVNPEVKQTLLDRAKIVRSLRQTLEERGFVEIETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 208 VLQVIPGGA-EARPFITH---HNALDLDLYLRIATELHLKRLVVGGIERVYEIGRVFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y+A   Y  +M+    ++  AA         ++Q    +      
Sbjct: 264 GISTRHNPEFTSLEAYQAFADYHTMMELTEALVCNAALAVRGSLQITYQGETIDLTPPWR 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E       I     +D        LL   AQQ    ++  D+   +  +      
Sbjct: 324 RVTIQELVEEATGI----FIDVEKGSTAELLPALAQQGIPDLSPHDSPGKLLVKAFEHCC 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP     L   + + P   +RFEL+    E  NA  EL DP++QR 
Sbjct: 380 ESR--LRQPTFVLDYPLEVCPLTKPHRSKPGLAERFELFIVGRETANAYSELTDPVDQRQ 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R E +   K     E + +DEDFL  L   +P + G+ +G DRL ML+  A +I +VI  
Sbjct: 438 RLEAQAALKAAGDEEAHFLDEDFLTALEYGLPPTGGLGIGIDRLAMLLCDAASIRDVIAF 497

Query: 346 PFSQSNQEE 354
           P  +    E
Sbjct: 498 PLLRPETGE 506


>gi|157158511|ref|YP_001465628.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|170021873|ref|YP_001726827.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|300924404|ref|ZP_07140378.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301330484|ref|ZP_07223100.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|312974064|ref|ZP_07788235.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|157080541|gb|ABV20249.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169756801|gb|ACA79500.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|300419399|gb|EFK02710.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300843567|gb|EFK71327.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|310331598|gb|EFP98854.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
          Length = 505

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|126697148|ref|YP_001092034.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166229814|sp|A3PFA8|SYK_PROM0 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126544191|gb|ABO18433.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 512

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 160/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R    S +R++     F+EI++ 
Sbjct: 142 LQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNVFKTRAKCISFIRKWLDNRNFLEIETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+++  G EK++     +RN 
Sbjct: 202 ILQSEAGGA-EARPFITH---HNTLDIPLYLRIATELHLKRMVVGGFEKVYELGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA-AEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M     +I+   A+       ++QN   +      
Sbjct: 258 GISTRHNPEFTSVEIYEAYSDYVDMMNLTEELIKDILADACGSLTINYQNKEIDFSKPWL 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
            I++ +   +Y  ID  +        D        +   +  ++  +T   + + +  +K
Sbjct: 318 RISMKDIVKKYTGIDFHSFNG-----DFLAAKKAVKNINVDFSNKVNTIGRLLNEVFEQK 372

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  +  +    +RFEL+    EL NA  EL+DP++QR
Sbjct: 373 VESK--LIEPTFVIDYPVEISPLARPHFDNKEIVQRFELFIVGRELANAFSELIDPVDQR 430

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R + +   + K   E + IDEDFL  L   MP + G+ +G DRL+ML+T + +I +VI 
Sbjct: 431 ERMQLQQSLRDKGDLEAHCIDEDFLNALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIP 490

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 491 FPLLKPE 497


>gi|242371652|ref|ZP_04817226.1| lysyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242350601|gb|EES42202.1| lysyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 495

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 166/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +  F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNKQGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A+         +     +  S   
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQEVFGSAKVQYNGEEIDLESSWR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      ++        D          A++ GI +  +  +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVN------FYDVQSDEEAVALAKEHGIEITENMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EET--LIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK++  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|260893493|ref|YP_003239590.1| lysyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865634|gb|ACX52740.1| lysyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 489

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 168/366 (45%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R +  E  F+E+++ 
Sbjct: 136 LRPLPEKWHGLKDVDLRYRQRYLDLIVNPEVKRIFILRSQIIRAIRRFLDERGFLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   LYL+ +PE   K+LL  G EK++     +RN 
Sbjct: 196 MMQPVPGGAA-ARPFIT---YHNALEMQLYLRIAPELYLKRLLVGGFEKVYEINRNFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPE 166
                H PEFTMLE Y+A+  Y+ ++K    +I   A+         +     +      
Sbjct: 252 GISTRHNPEFTMLELYQAYADYQDMLKLTEELITWVAKEVLGTWQIKYGEAEIDLSPPWR 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ EA  +   ID  +   +  +     L       G+ +     W +I + +  E +
Sbjct: 312 RISLLEAVRQKTGIDFASLEADEAREAAERL-------GVELKGKTLWGEIVNEVFEELV 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  YP   S LA     DPR T RFEL+    E+ NA  EL DP++QR 
Sbjct: 365 EPE--LINPTFVLDYPVDISPLAKRKKEDPRLTYRFELFIGGREIANAFSELNDPLDQRE 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++ ++    E +  DEDFL  L   MP + G+ +G DRLVML+T + +I EVI  
Sbjct: 423 RFLQQLERRRAGDEEAHMFDEDFLVALEYGMPPAGGLGIGIDRLVMLLTNSPSIREVILF 482

Query: 346 PFSQSN 351
           P  +  
Sbjct: 483 PLHRPR 488


>gi|254037141|ref|ZP_04871218.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226840247|gb|EEH72249.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
          Length = 514

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 159 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 218

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 219 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 274

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 275 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 334

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 335 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 389

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 390 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 447

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 448 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 507

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 508 PAMRPQK 514


>gi|121535048|ref|ZP_01666865.1| lysyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306298|gb|EAX47223.1| lysyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 498

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 167/367 (45%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++R Y     F+E+++ 
Sbjct: 143 LRPLPEKWHGLKDVETRYRQRYLDLIVNPEVRNTFVLRSRIIQAMRRYLDSKGFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ +PE   K+L+  G E+++     +RN 
Sbjct: 203 MMHPIAGGAA-ARPFIT---YHNALDMNLYMRIAPELYLKRLIVGGFERVYEIGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y+ +MK    II + A +V      ++Q    +      
Sbjct: 259 GISIRHNPEFTLMELYQAYADYQDIMKITEEIIAQVALDVLGTTKITYQGQEIDLTPPWT 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y+ +D  T                A + G+     D   +I + +  E  
Sbjct: 319 RMTMTEAILKYSGVDFSTV------KTVEEARAIADRLGVVYEKKDGIGNILNNVFEEVA 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S LA     +P  T RFE +    E+ N   EL DPI+Q+ 
Sbjct: 373 EKH--LIQPTFIIGHPVEISPLAKRNKDNPAITDRFEAFIFAREMANGFSELNDPIDQKE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +++   +E + +DED++  L   MP + G+ +G DRLVML+T + +I +VI  
Sbjct: 431 RFLAQVAQRESGDDEAHMMDEDYVIALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDVILF 490

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 491 PHMRHRE 497


>gi|170766125|ref|ZP_02900936.1| lysyl-tRNA synthetase LysS [Escherichia albertii TW07627]
 gi|170125271|gb|EDS94202.1| lysyl-tRNA synthetase LysS [Escherichia albertii TW07627]
          Length = 505

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 167/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVAAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|323171560|gb|EFZ57206.1| lysyl-tRNA synthetase [Escherichia coli LT-68]
          Length = 505

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKELAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|2501020|sp|Q53638|SYK_STAAU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|567884|gb|AAA53114.1| lysyl-tRNA synthetase [Staphylococcus aureus]
          Length = 495

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 162/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A  V       +     +  S   
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWT 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        +          A++ GI +     +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVD------FYEVKSDEERKALAKEHGIEIKDTMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  N   EL DPI+Q+ 
Sbjct: 372 EET--LIQPTFIYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANRFTELNDPIDQKG 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK +  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|170766869|ref|ZP_02901322.1| lysyl-tRNA synthetase LysU [Escherichia albertii TW07627]
 gi|170124307|gb|EDS93238.1| lysyl-tRNA synthetase LysU [Escherichia albertii TW07627]
          Length = 505

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQDVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|331655961|ref|ZP_08356949.1| lysine--tRNA ligase [Escherichia coli M718]
 gi|331046315|gb|EGI18405.1| lysine--tRNA ligase [Escherichia coli M718]
          Length = 505

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVIRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|317055780|ref|YP_004104247.1| lysyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315448049|gb|ADU21613.1| lysyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 525

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I S++R Y  E  F+E+++ 
Sbjct: 171 LQPLPEKWHGLKDQDTRYRQRYTDLICNPEVKDTFIKRSKIISTIRRYLDERGFMEVETP 230

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 231 MLVSNAGGAA-ARPFETHY---NALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 286

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    ++ R  A  V       +     +     E
Sbjct: 287 GVDARHNPEFTLMELYQAYTDYHGMMDLTEDMFRHLAETVCGGTTIPYGEHQIDLGKPFE 346

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +YA +D        +          A++  I         DI +    E +
Sbjct: 347 RLTMIEAVKKYAGVDFN------EIKTTEEAKALAKEKHIEFEDRHKRGDILNLFFEEYV 400

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P  P + +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 401 EEH--LIQPTFIMDHPIEISPLTKKKPDAPDYVERFELFINGWEMCNAYSELNDPIDQRE 458

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +       E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 459 RFKAQEEALSNGDEEANRTDEDFLRALEIGMPPTGGIGYGIDRLVMLLTNSPAIRDVLLF 518

Query: 346 PFSQS 350
           P  +S
Sbjct: 519 PTMKS 523


>gi|300936045|ref|ZP_07150993.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300458837|gb|EFK22330.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 505

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|193213961|ref|YP_001995160.1| lysyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087438|gb|ACF12713.1| lysyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 517

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 100/377 (26%), Positives = 170/377 (45%), Gaps = 39/377 (10%)

Query: 1   MHQIPSQP-------------WWNRDFHYRRR-----------PFLLKRNMIQSSLREYF 36
           +  +P                + +++  YR+R              LKR  + +S+R + 
Sbjct: 154 LRPMPIAKQKEVDGKTVTYDAFSDKELRYRQRYVDLIVNPEVKTVFLKRTKMINSIRNFL 213

Query: 37  VENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
            E  ++E+++  LQ   G  +  R F T     + +  PLYL+ + E   K+L+  G + 
Sbjct: 214 NERGYLEVETPILQPIYGGAS-ARPFVTH---HNTLDMPLYLRIANELYLKRLIVGGFDG 269

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQ 155
           ++ FA  +RN      H PEFT +E Y A++ Y  +M     ++   AE      +  F 
Sbjct: 270 VYEFAKDFRNEGMDRFHNPEFTQIELYVAYKDYAWMMNLVEEMLSKTAEAVNGSTVVEFA 329

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
               +     + +T+ ++   Y   D+       D      L   A++ GI +  +   S
Sbjct: 330 GHKIDLKPPFKRMTITDSIKEYTGKDI-------DGKSEAELRQIAKELGIEIEANLGSS 382

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            I   I  E +EP   +   T +  YP   S LA  +   P F +RFEL A   E+CN+ 
Sbjct: 383 KIIDEIFGEYVEPK--LIDPTFIMDYPVEMSPLAKKHREKPGFVERFELIAAGKEICNSF 440

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP++QR R E++   + +  +E   +DEDFL  L   MP  +G+ +G DRL M++T
Sbjct: 441 SELNDPLDQRARLEEQASLRARGDDEAMAVDEDFLRALEYGMPPCAGLGIGIDRLAMILT 500

Query: 335 GANNINEVIWTPFSQSN 351
           G  +I +V++ P  +  
Sbjct: 501 GQESIRDVLFFPQMKPE 517


>gi|47093173|ref|ZP_00230948.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47018480|gb|EAL09238.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|328467946|gb|EGF38976.1| lysyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 498

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 163/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      ++   N +      
Sbjct: 260 GTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYNVDLTPNWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A   Y  +D      + +          A++  + V    T+  I +      +
Sbjct: 320 RIHMADAVKEYVGVDFWNVTSDEE------ARELAKKHNVPVTEHMTYGHILNEFFETYV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LIQPTFVYGHPVEISPLAKKNKEDDRFTDRFELFIVGREHANAFSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  
Sbjct: 432 RFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLF 491

Query: 346 PFSQ 349
           P  +
Sbjct: 492 PTMK 495


>gi|15804722|ref|NP_290763.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15834365|ref|NP_313138.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|16131955|ref|NP_418553.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. MG1655]
 gi|89110851|ref|AP_004631.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. W3110]
 gi|157163595|ref|YP_001460913.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|168748011|ref|ZP_02773033.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4113]
 gi|168755314|ref|ZP_02780321.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4401]
 gi|168760993|ref|ZP_02786000.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4501]
 gi|168766403|ref|ZP_02791410.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4486]
 gi|168774502|ref|ZP_02799509.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4196]
 gi|168780556|ref|ZP_02805563.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4076]
 gi|168784761|ref|ZP_02809768.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC869]
 gi|168798195|ref|ZP_02823202.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC508]
 gi|170083579|ref|YP_001732899.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. DH10B]
 gi|188493779|ref|ZP_03001049.1| lysyl-tRNA synthetase LysU [Escherichia coli 53638]
 gi|193063048|ref|ZP_03044140.1| lysyl-tRNA synthetase LysU [Escherichia coli E22]
 gi|194426817|ref|ZP_03059370.1| lysyl-tRNA synthetase LysU [Escherichia coli B171]
 gi|195935919|ref|ZP_03081301.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208807103|ref|ZP_03249440.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4206]
 gi|208813962|ref|ZP_03255291.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4045]
 gi|208819932|ref|ZP_03260252.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4042]
 gi|209400647|ref|YP_002273676.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4115]
 gi|209921620|ref|YP_002295704.1| lysyl-tRNA synthetase [Escherichia coli SE11]
 gi|217326188|ref|ZP_03442272.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. TW14588]
 gi|218556682|ref|YP_002389596.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218697832|ref|YP_002405499.1| lysyl-tRNA synthetase [Escherichia coli 55989]
 gi|238903238|ref|YP_002929034.1| lysine tRNA synthetase, inducible [Escherichia coli BW2952]
 gi|254796152|ref|YP_003080989.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|260846924|ref|YP_003224702.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O103:H2
           str. 12009]
 gi|260858233|ref|YP_003232124.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O26:H11
           str. 11368]
 gi|261225251|ref|ZP_05939532.1| lysine tRNA synthetase, inducible [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255497|ref|ZP_05948030.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O157:H7
           str. FRIK966]
 gi|291285546|ref|YP_003502364.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli O55:H7 str.
           CB9615]
 gi|293417636|ref|ZP_06660258.1| lysyl-tRNA synthetase [Escherichia coli B185]
 gi|293476442|ref|ZP_06664850.1| lysyl-tRNA synthetase [Escherichia coli B088]
 gi|300818053|ref|ZP_07098266.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300821220|ref|ZP_07101368.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300906460|ref|ZP_07124156.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300920874|ref|ZP_07137270.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300947711|ref|ZP_07161878.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300954178|ref|ZP_07166643.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301027934|ref|ZP_07191223.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301306056|ref|ZP_07212135.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301644736|ref|ZP_07244713.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|307140823|ref|ZP_07500179.1| lysyl-tRNA synthetase [Escherichia coli H736]
 gi|307312033|ref|ZP_07591670.1| lysyl-tRNA synthetase [Escherichia coli W]
 gi|331644878|ref|ZP_08345995.1| lysine--tRNA ligase [Escherichia coli H736]
 gi|331670994|ref|ZP_08371828.1| lysine--tRNA ligase [Escherichia coli TA271]
 gi|331680261|ref|ZP_08380920.1| lysine--tRNA ligase [Escherichia coli H591]
 gi|67473144|sp|P0A8N5|SYK2_ECOLI RecName: Full=Lysyl-tRNA synthetase, heat inducible; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|67473145|sp|P0A8N6|SYK2_ECO57 RecName: Full=Lysyl-tRNA synthetase, heat inducible; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|12519106|gb|AAG59329.1|AE005646_8 lysine tRNA synthetase, inducible; heat shock protein [Escherichia
           coli O157:H7 str. EDL933]
 gi|398703|emb|CAA34542.1| unnamed protein product [Escherichia coli]
 gi|536974|gb|AAA97029.1| lysyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|1790571|gb|AAC77090.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. MG1655]
 gi|13364588|dbj|BAB38534.1| lysine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|85676882|dbj|BAE78132.1| lysine tRNA synthetase, inducible [Escherichia coli str. K12
           substr. W3110]
 gi|157069275|gb|ABV08530.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|169891414|gb|ACB05121.1| lysine tRNA synthetase, inducible [Escherichia coli str. K-12
           substr. DH10B]
 gi|187769884|gb|EDU33728.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4196]
 gi|188017408|gb|EDU55530.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4113]
 gi|188488978|gb|EDU64081.1| lysyl-tRNA synthetase LysU [Escherichia coli 53638]
 gi|189001831|gb|EDU70817.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4076]
 gi|189357458|gb|EDU75877.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4401]
 gi|189364021|gb|EDU82440.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4486]
 gi|189368520|gb|EDU86936.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4501]
 gi|189375037|gb|EDU93453.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC869]
 gi|189379164|gb|EDU97580.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC508]
 gi|192931307|gb|EDV83909.1| lysyl-tRNA synthetase LysU [Escherichia coli E22]
 gi|194415153|gb|EDX31422.1| lysyl-tRNA synthetase LysU [Escherichia coli B171]
 gi|208726904|gb|EDZ76505.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4206]
 gi|208735239|gb|EDZ83926.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4045]
 gi|208740055|gb|EDZ87737.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4042]
 gi|209162047|gb|ACI39480.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. EC4115]
 gi|209750618|gb|ACI73616.1| lysine tRNA synthetase [Escherichia coli]
 gi|209750620|gb|ACI73617.1| lysine tRNA synthetase [Escherichia coli]
 gi|209750622|gb|ACI73618.1| lysine tRNA synthetase [Escherichia coli]
 gi|209750624|gb|ACI73619.1| lysine tRNA synthetase [Escherichia coli]
 gi|209750626|gb|ACI73620.1| lysine tRNA synthetase [Escherichia coli]
 gi|209914879|dbj|BAG79953.1| lysyl-tRNA synthase [Escherichia coli SE11]
 gi|217322409|gb|EEC30833.1| lysyl-tRNA synthetase LysU [Escherichia coli O157:H7 str. TW14588]
 gi|218354564|emb|CAV01470.1| lysine tRNA synthetase, inducible [Escherichia coli 55989]
 gi|218363451|emb|CAR01105.1| lysine tRNA synthetase, inducible [Escherichia coli IAI1]
 gi|238861695|gb|ACR63693.1| lysine tRNA synthetase, inducible [Escherichia coli BW2952]
 gi|254595552|gb|ACT74913.1| lysine tRNA synthetase, inducible [Escherichia coli O157:H7 str.
           TW14359]
 gi|257756882|dbj|BAI28384.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O26:H11
           str. 11368]
 gi|257762071|dbj|BAI33568.1| lysine tRNA synthetase LysU, inducible [Escherichia coli O103:H2
           str. 12009]
 gi|260451041|gb|ACX41463.1| lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|290765419|gb|ADD59380.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli O55:H7 str.
           CB9615]
 gi|291320895|gb|EFE60337.1| lysyl-tRNA synthetase [Escherichia coli B088]
 gi|291430354|gb|EFF03352.1| lysyl-tRNA synthetase [Escherichia coli B185]
 gi|299878984|gb|EFI87195.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300318762|gb|EFJ68546.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300401741|gb|EFJ85279.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300412180|gb|EFJ95490.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300452701|gb|EFK16321.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300526109|gb|EFK47178.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300529463|gb|EFK50525.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300838698|gb|EFK66458.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301076963|gb|EFK91769.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|306907840|gb|EFN38341.1| lysyl-tRNA synthetase [Escherichia coli W]
 gi|309704599|emb|CBJ03949.1| lysyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|315063447|gb|ADT77774.1| lysine tRNA synthetase, inducible [Escherichia coli W]
 gi|315138686|dbj|BAJ45845.1| lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|315253814|gb|EFU33782.1| lysyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|320190736|gb|EFW65386.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320638889|gb|EFX08535.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320644258|gb|EFX13323.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320649576|gb|EFX18100.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320654972|gb|EFX22933.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320660479|gb|EFX27940.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320665749|gb|EFX32786.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|323162115|gb|EFZ47984.1| lysyl-tRNA synthetase [Escherichia coli E128010]
 gi|323182237|gb|EFZ67647.1| lysyl-tRNA synthetase [Escherichia coli 1357]
 gi|323380483|gb|ADX52751.1| lysyl-tRNA synthetase [Escherichia coli KO11]
 gi|323935444|gb|EGB31782.1| lysyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940049|gb|EGB36243.1| lysyl-tRNA synthetase [Escherichia coli E482]
 gi|323946124|gb|EGB42159.1| lysyl-tRNA synthetase [Escherichia coli H120]
 gi|324017207|gb|EGB86426.1| lysyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324118698|gb|EGC12590.1| lysyl-tRNA synthetase [Escherichia coli E1167]
 gi|326341816|gb|EGD65599.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346608|gb|EGD70342.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|331035853|gb|EGI08091.1| lysine--tRNA ligase [Escherichia coli H736]
 gi|331061908|gb|EGI33833.1| lysine--tRNA ligase [Escherichia coli TA271]
 gi|331071724|gb|EGI43060.1| lysine--tRNA ligase [Escherichia coli H591]
          Length = 505

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|332280912|ref|ZP_08393325.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|332103264|gb|EGJ06610.1| lysyl-tRNA synthetase [Shigella sp. D9]
          Length = 514

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 159 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 218

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 219 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 274

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 275 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 334

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 335 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESVGITVEKSWGLGRIVTEIFDEVA 389

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 390 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 447

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 448 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 507

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 508 PAMRPQK 514


>gi|299820637|ref|ZP_07052526.1| lysine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817658|gb|EFI84893.1| lysine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 498

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 169/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +REY  +  ++E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNDESQKRFVMRSKILRYIREYMDKEDYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIPGGAA-AKPFITH---HNALDMDLYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA-AEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A E+YE +M+    ++     ++       +     +   +  
Sbjct: 260 GISTRHNPEFTMLESYAAFENYEDVMELVEGLVAYVSEKLHGTTKIQYGEYEVDLTPKWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + +A+A   YA +D  T   + +          A++  + +    T+  I +      +
Sbjct: 320 RLHMADAVKEYAGVDFWTVKTDEE------AKALAKEHNVAITEHMTYGHILNEFFETFV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRQ 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +DEDFL  L   +P + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEGQVKEREQGNDEAHSMDEDFLESLEYGLPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PTMKHR 497


>gi|322418264|ref|YP_004197487.1| lysyl-tRNA synthetase [Geobacter sp. M18]
 gi|320124651|gb|ADW12211.1| lysyl-tRNA synthetase [Geobacter sp. M18]
          Length = 492

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 169/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR+ I   +RE+     F+E+++ 
Sbjct: 137 LLPLPEKFHGLTDVETRYRQRYVDLIVSPEVREVFYKRSRIVQLIREFMTRKDFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   L+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 197 MMQQIPGGAT-AKPFVTH---HNALDMELFLRIAPELYLKRLVVGGFERVFEINRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ ++E LM     ++    +       F++     +     +
Sbjct: 253 GISVRHNPEFTMMEFYQAYATFEDLMNFTEELLCHVTQELLGTLDFTYGGEPISFQRPWK 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             TV EA   Y +ID  +        DR L Y  AQ+ G+ +  D  +  + + I  E  
Sbjct: 313 RFTVKEAILEYGDIDAKS------LEDRDLAYAYAQKIGLELPEDIGYGKLITEIFEEVA 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     DP +  RFE +    E+ NA  EL DP +Q+ 
Sbjct: 367 EAK--LIQPTFITNYPTEVSPLSRKSDHDPEYVDRFEFFCAGREMANAFSELNDPRDQKE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K K   E + +DED++  L   +P ++G  +G DRLVML+T + +I +VI  
Sbjct: 425 RFLAQVAAKDKGDEEAHYMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDSPSIRDVILF 484

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 485 PQLRKEGK 492


>gi|237703720|ref|ZP_04534201.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|26111378|gb|AAN83560.1|AE016771_71 Lysyl-tRNA synthetase, heat inducible [Escherichia coli CFT073]
 gi|91075253|gb|ABE10134.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli UTI89]
 gi|226901632|gb|EEH87891.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
          Length = 514

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 159 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 218

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 219 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 274

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 275 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 334

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 335 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 389

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 390 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 447

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 448 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 507

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 508 PAMRPQK 514


>gi|95929407|ref|ZP_01312150.1| lysyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95134523|gb|EAT16179.1| lysyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 494

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 172/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR+ I S +R +  E  ++E+++ 
Sbjct: 139 LQPLPEKWHGLTDVETRYRQRYLDLIVNPEVGDVFKKRSQIISLMRAFMQERDYLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G  T  + F T     + ++  L+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMQPVAGGAT-AKPFVTH---HNTLKMDLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ +Y  LM     +I   A +V   ++ S+   + +  +  +
Sbjct: 255 GISIQHNPEFTMMEFYQAYATYHDLMDMTEEMIGSIAEKVCGSRVISYGGKDVDLTAPWD 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV EA  +Y +I         D  D       A   G+       +  + + +  E  
Sbjct: 315 RLTVKEAIVKYGDI------SLEDLEDPDKALAYANSIGLEFEGTIGYGKLLTELFDEVA 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  YP   S L+      P    RFEL+    EL NA  EL DP++Q+ 
Sbjct: 369 EPK--LWNPTFVTEYPTEVSPLSRRNDERPEVVDRFELFVVGRELANAFSELNDPVDQKG 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE+++ EK+   +E + +DED++  L   +P ++G  +G DRLVML+T + +I +VI  
Sbjct: 427 RFEQQLVEKEAGDDEAHAMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDSASIRDVILF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PQLRKE 492


>gi|194437248|ref|ZP_03069346.1| lysyl-tRNA synthetase LysU [Escherichia coli 101-1]
 gi|253775242|ref|YP_003038073.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254164062|ref|YP_003047170.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|194423804|gb|EDX39793.1| lysyl-tRNA synthetase LysU [Escherichia coli 101-1]
 gi|242379656|emb|CAQ34479.1| lysyl-tRNA synthetase, subunit of lysyl-tRNA synthetase / Ap[4]A
           synthetase / Ap[3]A synthetase [Escherichia coli
           BL21(DE3)]
 gi|253326286|gb|ACT30888.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975963|gb|ACT41634.1| lysine tRNA synthetase, inducible [Escherichia coli B str. REL606]
 gi|253980119|gb|ACT45789.1| lysine tRNA synthetase, inducible [Escherichia coli BL21(DE3)]
 gi|323960364|gb|EGB56002.1| lysyl-tRNA synthetase [Escherichia coli H489]
 gi|323969887|gb|EGB65165.1| lysyl-tRNA synthetase [Escherichia coli TA007]
          Length = 505

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|313639775|gb|EFS04521.1| lysyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 498

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 164/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      +    + +   +  
Sbjct: 260 GTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCEQVNGTTKITXXEYDVDLTPKWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A   Y  +D      + +       +  A++  + V    T+  I +      +
Sbjct: 320 RIHMADAVKEYVGVDFWNVTSDEE------AHQLAKEHNVPVTKHMTYGHILNEFFETFV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  
Sbjct: 432 RFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PTMKHR 497


>gi|331665797|ref|ZP_08366691.1| lysine--tRNA ligase [Escherichia coli TA143]
 gi|331056848|gb|EGI28842.1| lysine--tRNA ligase [Escherichia coli TA143]
          Length = 505

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|170682016|ref|YP_001746526.1| lysyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|170519734|gb|ACB17912.1| lysyl-tRNA synthetase LysU [Escherichia coli SMS-3-5]
          Length = 505

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|75764905|ref|ZP_00744256.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74487607|gb|EAO51472.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 430

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 168/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +N ++E+++ 
Sbjct: 75  LRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETP 134

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F+T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 135 MMHAIAGGAS-ARPFTTH---HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 190

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +MK   N++   A+         + +   N   E  
Sbjct: 191 GVSTRHNPEFTMIELYEAYADYNDIMKLTENMVAHIAKKVLGTTTILYGDYEINLEPEWT 250

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +++  D    +              A++  + +        I +    +K+
Sbjct: 251 RLHMVDAIKQHSGADFWNPMSV------EEARELAKEHNVEIKDTMEVGHIINEFFEQKV 304

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E  L      +   +P   S LA     DPRFT RFEL+    E  NA  EL DPI+ + 
Sbjct: 305 EDKLIHQ--HLFTGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDPKE 362

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 363 RFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF 422

Query: 346 PFSQSNQE 353
           P  +  Q+
Sbjct: 423 PAMRHKQD 430


>gi|256019775|ref|ZP_05433640.1| lysyl-tRNA synthetase [Shigella sp. D9]
          Length = 505

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESVGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|169830349|ref|YP_001716331.1| lysyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|169637193|gb|ACA58699.1| lysyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 490

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D   R              R   + R+ I +++R Y  EN F+E+++ 
Sbjct: 136 LRPLPEKWHGLKDVELRYRQRYLDLIINPQSREVFVTRSRIIAAIRRYLDENGFLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G     R F T     + +   L+L+ +PE   K+LL  G +K++     +RN 
Sbjct: 196 MMQTLAGGAV-ARPFKT---YHNALGISLFLRIAPELYLKRLLVGGFDKVYEINRNFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y  +M     +I    E         +     +      
Sbjct: 252 GISTRHNPEFTMLEIYEAYADYHDMMNLTERLISSVIEQVFTDHIFPYGEHRLDFNIPWP 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             ++ E       +D        +        + A+ AG+    + +W++  + +  +K+
Sbjct: 312 RYSMLEVVREKTGLDF-------ENLSPEEAAVAARDAGLEFDSEPSWAEALNAVFEDKV 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P   +   T +  YP   S LA  +   P    RFEL+    E+ NA  EL DP++QR 
Sbjct: 365 QPQ--LVQPTFIYDYPLELSPLAKRHEDAPHLVYRFELFIAGREIANAFSELNDPVDQRE 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +++++K+   E +  DEDF+  L   MP + G+ +G DRL+ML+T + +I +VI  
Sbjct: 423 RFQAQLEKRKRGDEEAHVFDEDFVTALEYGMPPAGGLGIGIDRLIMLLTDSPSIRDVILF 482

Query: 346 PFSQSNQE 353
           P  +  ++
Sbjct: 483 PLLRPRED 490


>gi|282882559|ref|ZP_06291180.1| lysine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297701|gb|EFA90176.1| lysine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 637

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 167/369 (45%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              LKR  I  ++R+Y  E  FIE+++ 
Sbjct: 137 LQILPEKFHGLKDPDLRYRQRYVDLIVNPEIKEVFLKRTKIIKAIRQYLDEKGFIEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   + L+ + E   K+L+  G +K++     +RN 
Sbjct: 197 ILGTVAGGA-NARPFLTH---HNTLDIDMQLRIANELFLKRLIVGGFDKVYEMGKMFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   +++M    NI   AA+        ++Q    +  +   
Sbjct: 253 GMDTRHNPEFTNIELYQAYVDMDEMMAITENIFEYAAQKVLGTDKITYQGTEISLKAPWR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA   YA +D      +            A++ G+ V    +W  I S       
Sbjct: 313 RMSMIEAVKEYAGVDFDKVETD------EQAQQLAKEKGVEVEEGSSWGKILSEFFETFC 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D R T+RFE +    E  NA  EL DPI+QR 
Sbjct: 367 EEK--LVQPTFITGHPVDISPLAKKDPKDKRLTRRFEAFINTWEFANAFSELNDPIDQRE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E +K   E +P+D DF+  +   +P + G+ +G DR++ML+T   +I ++I  
Sbjct: 425 RFEAQVREHEKGDEEAHPMDSDFINAIEVGLPPTGGLGIGVDRMIMLLTDQPSIRDIILF 484

Query: 346 PFSQSNQEE 354
           P  +   +E
Sbjct: 485 PTMKPIGKE 493


>gi|270264899|ref|ZP_06193163.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270041197|gb|EFA14297.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 505

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + + +R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQVMAGIRNFMVERGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R    +V  +    + +   +     E
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLTQDVLGKTQVQYGDEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       A+  GI++        + + I  E  
Sbjct: 326 KLTMTEAIKKY-----RPETDLADLADMGKAVAIAESIGIKIEKSWGLGRVVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|224456425|ref|ZP_03664898.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158489|gb|ADA77880.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 560

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + + +R YF    F+E+++ 
Sbjct: 206 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVNFIRNYFDRLDFMEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 266 MMHVLQGGGA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++ +   EV   +I  +     N   + E
Sbjct: 322 GVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYE 381

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 382 RISMVDSIVKY-----NDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETV 436

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 437 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFIGAREVANGFSELNDAEDQAE 494

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 495 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 554

Query: 346 PFSQSN 351
           P  +  
Sbjct: 555 PHMKPE 560


>gi|325267116|ref|ZP_08133785.1| lysine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981469|gb|EGC17112.1| lysine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 504

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 150 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNEHYLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 210 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     S+     +  S  E
Sbjct: 266 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 326 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEVVKHGESLPPSPGIGSLQLALFEGCA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 381 ESK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 439 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 498

Query: 346 PFSQSN 351
           P  +  
Sbjct: 499 PQMRPE 504


>gi|86608981|ref|YP_477743.1| lysyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557523|gb|ABD02480.1| lysyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 511

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 156/370 (42%), Gaps = 25/370 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    RD    YR+R             LL R  I  SLR+   E  F+EI++ 
Sbjct: 148 LLPLPDKWHGLRDVEKRYRQRYVDLIVNPEVKQTLLDRAQIIRSLRQTLEERGFVEIETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 208 VLQVIPGGA-EARPFVTH---HNALDLDLYLRIATELHLKRLVVGGIERVYEIGRVFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y+A   Y  +M+    ++  AA         ++Q    +      
Sbjct: 264 GISTRHNPEFTSLEAYQAFADYHTMMELTETLVCNAALAVRGSLQLTYQGEAIDLTPPWR 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E       I +      P+     LL   A Q    ++  D+   +  +      
Sbjct: 324 RVTMQELVEEATGIFIDVEKGCPE----ELLPALAAQGIPDLSPQDSPGQLLVKAFEHCC 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP     L   + + P   +RFEL+    E  NA  EL DP++QR 
Sbjct: 380 ESR--LRQPTFVLDYPLEVCPLTKPHRSKPGLAERFELFIVGRETANAYSELTDPVDQRQ 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R E +   K     E + +DEDFL  L   +P + G+ +G DRLVML+  A +I +VI  
Sbjct: 438 RLEAQAALKAAGDEEAHFLDEDFLTALEYGLPPTGGLGVGIDRLVMLLCDAPSIRDVIAF 497

Query: 346 PFSQSNQEEI 355
           P  +    E+
Sbjct: 498 PLLRPETGEV 507


>gi|309785303|ref|ZP_07679934.1| lysyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308926423|gb|EFP71899.1| lysyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 505

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y      +  D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RSETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|11513774|pdb|1BBU|A Chain A, Lysyl-Trna Synthetase (Lyss) Complexed With Lysine
 gi|11513776|pdb|1BBW|A Chain A, Lysyl-Trna Synthetase (Lyss)
          Length = 504

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 149 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 265 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 325 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 380 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 438 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 497

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 498 PAMRPVK 504


>gi|333031523|ref|ZP_08459584.1| Lysyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332742120|gb|EGJ72602.1| Lysyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 576

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 99/357 (27%), Positives = 164/357 (45%), Gaps = 26/357 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +  YRRR              +KR  I +S+R++F    +IE+++  LQ  PG     
Sbjct: 162 DPEMRYRRRYVDLAVNEGIKDIFIKRTKIYNSMRDFFNTRGYIEVETPVLQPIPGGAA-A 220

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F T     + +  PLYL+ + E   K+L+  G + ++ F+  +RN      H PEFT+
Sbjct: 221 RPFITH---HNALDMPLYLRIANELYIKRLVVGGFDGVYEFSRNFRNEGMDRTHNPEFTV 277

Query: 120 LEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           +E Y A++ Y  +M     +I     +V             +  +  + IT+ ++   + 
Sbjct: 278 MEIYVAYKDYNWMMCFTEQMIEKICLDVNGTTKVKVGENEIDFKAPFKRITMLDSIKEFT 337

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             DL              +    ++  + +        +   I  E  E N      T +
Sbjct: 338 GYDLNG-------KSEDEIREICKKLNLEIDETMGKGKLIDEIFGEFCEGNY--IQPTFI 388

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L   +  +P  T+RFEL A   ELCNA  EL DPI+Q  RF+ +++  +K 
Sbjct: 389 TDYPIEMSPLTKKHRDNPDLTERFELMANGKELCNAYSELNDPIDQLARFQDQLKLSEKG 448

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
            +E   ID DF+  L   MP ++G+ +G DRLVML+TG  +I EV++ P  +  ++E
Sbjct: 449 DDEAMFIDMDFVRALEYGMPPTAGMGIGMDRLVMLLTGQESIQEVLFFPQMRPEKKE 505


>gi|117626414|ref|YP_859737.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|161486020|ref|NP_756986.2| lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|162138308|ref|YP_543665.2| lysyl-tRNA synthetase [Escherichia coli UTI89]
 gi|218561217|ref|YP_002394130.1| lysyl-tRNA synthetase [Escherichia coli S88]
 gi|218707745|ref|YP_002415264.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
 gi|227886830|ref|ZP_04004635.1| lysine--tRNA ligase [Escherichia coli 83972]
 gi|293402762|ref|ZP_06646859.1| lysS [Escherichia coli FVEC1412]
 gi|293407855|ref|ZP_06651695.1| lysyl-tRNA synthetase [Escherichia coli B354]
 gi|298378291|ref|ZP_06988175.1| lysS [Escherichia coli FVEC1302]
 gi|300897550|ref|ZP_07115962.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300940610|ref|ZP_07155175.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300988376|ref|ZP_07178640.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301021726|ref|ZP_07185698.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301047649|ref|ZP_07194712.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|331650168|ref|ZP_08351241.1| lysine--tRNA ligase [Escherichia coli M605]
 gi|331660708|ref|ZP_08361640.1| lysine--tRNA ligase [Escherichia coli TA206]
 gi|39932415|sp|Q8FAT5|SYK2_ECOL6 RecName: Full=Lysyl-tRNA synthetase, heat inducible; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|115515538|gb|ABJ03613.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218367986|emb|CAR05786.1| lysine tRNA synthetase, inducible [Escherichia coli S88]
 gi|218434842|emb|CAR15778.1| lysine tRNA synthetase, inducible [Escherichia coli UMN026]
 gi|227836172|gb|EEJ46638.1| lysine--tRNA ligase [Escherichia coli 83972]
 gi|281181228|dbj|BAI57558.1| lysyl-tRNA synthetase [Escherichia coli SE15]
 gi|284924217|emb|CBG37317.1| lysyl-tRNA synthetase [Escherichia coli 042]
 gi|291429677|gb|EFF02691.1| lysS [Escherichia coli FVEC1412]
 gi|291472106|gb|EFF14588.1| lysyl-tRNA synthetase [Escherichia coli B354]
 gi|294491540|gb|ADE90296.1| lysyl-tRNA synthetase LysU [Escherichia coli IHE3034]
 gi|298280625|gb|EFI22126.1| lysS [Escherichia coli FVEC1302]
 gi|300300455|gb|EFJ56840.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300358698|gb|EFJ74568.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300397909|gb|EFJ81447.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300407476|gb|EFJ91014.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300454610|gb|EFK18103.1| lysyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|307556300|gb|ADN49075.1| lysyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307629201|gb|ADN73505.1| lysyl-tRNA synthetase [Escherichia coli UM146]
 gi|315287968|gb|EFU47370.1| lysyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315294016|gb|EFU53368.1| lysyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315296081|gb|EFU55390.1| lysyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|320193511|gb|EFW68148.1| lysyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|323189988|gb|EFZ75266.1| lysyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|323950305|gb|EGB46186.1| lysyl-tRNA synthetase [Escherichia coli H252]
 gi|323954384|gb|EGB50168.1| lysyl-tRNA synthetase [Escherichia coli H263]
 gi|323965518|gb|EGB60972.1| lysyl-tRNA synthetase [Escherichia coli M863]
 gi|323975529|gb|EGB70630.1| lysyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324008622|gb|EGB77841.1| lysyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|327250072|gb|EGE61791.1| lysyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|330908475|gb|EGH36994.1| lysyl-tRNA synthetase (class 2) [Escherichia coli AA86]
 gi|331041113|gb|EGI13270.1| lysine--tRNA ligase [Escherichia coli M605]
 gi|331051750|gb|EGI23789.1| lysine--tRNA ligase [Escherichia coli TA206]
          Length = 505

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|82778344|ref|YP_404693.1| lysyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|123728505|sp|Q32BV3|SYK_SHIDS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81242492|gb|ABB63202.1| lysine tRNA synthetase, constitutive [Shigella dysenteriae Sd197]
          Length = 505

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|167626876|ref|YP_001677376.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|167596877|gb|ABZ86875.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 560

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R YF +  F+E+++ 
Sbjct: 206 IRPLPDKFHGLADQEMRYRQRYVDLITNEKAREVFKVRSKVVSFIRNYFDKLDFMEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +  PLYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 266 MMHVLQGGAA-AKPFKTH---HNALDMPLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    N++ +   EV   +I  +     N   + E
Sbjct: 322 GVSSRHNPEFTMLEFYMAYADYNDLMDLTENMLSKLVQEVIGSEILEYGEYKINFGGKYE 381

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++  +Y        +   D          A++  I+V        + + I  E +
Sbjct: 382 RISMVDSIVKY-----NDDITKEDLATFESAKALAEKLKIKVEAYHELGHLINEIFEETV 436

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 437 EHQ--LIQPTFITDYPAVVSPLARRQDGNPEFTDRFEFFVGAREIANGFSELNDAEDQAE 494

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++      +E  P D+D++  L   MP ++G  +G DRLVM +T + +I +VI  
Sbjct: 495 RFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTNSQSIRDVILF 554

Query: 346 PFSQSN 351
           P  +  
Sbjct: 555 PHMKRE 560


>gi|215489478|ref|YP_002331909.1| lysyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|215267550|emb|CAS12004.1| lysine tRNA synthetase, inducible [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 505

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGIMVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|90020864|ref|YP_526691.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
           [Saccharophagus degradans 2-40]
 gi|89950464|gb|ABD80479.1| lysyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 502

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 89/372 (23%), Positives = 160/372 (43%), Gaps = 28/372 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ +   +R Y  E  F+E+++ 
Sbjct: 138 LRPLPDKFHGLADQEMRYRQRYVDLIANPEVRKTFVTRSRVVQFIRNYLNEKAFLEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 198 MLQTIPGGAS-ARPFITH---HNALDMDMYLRIAPELYLKRLVVGGFERVYEINRNFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE+Y+A+  Y  LM    +++R  A+           +      EPE 
Sbjct: 254 GLSTRHNPEFTMLEFYQAYADYNDLMDLTEDMLRNLAQTVLGDTKVVNTLPSKGDDEPET 313

Query: 168 ITVAEAFARYANID-------LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
           +T  +    +  +            L   +          A+  G+++        +   
Sbjct: 314 VTY-DFAQPFTRLSVFNSILQYNPELKAENIDTLEAAREVAKNLGVQLKDSYGLGKVQIE 372

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           I  + +E    +   T +  YP   S LA    ++P  T RFE +    E+ N   EL D
Sbjct: 373 IFEKTVEHR--LIQPTFITEYPTEVSPLARRSDSNPFVTDRFEFFVGGREIANGFSELND 430

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
             +Q  RF++++ EK    +E    D D++  L   +P ++G  +G DRLVML+T + +I
Sbjct: 431 AEDQAQRFKEQVAEKDAGDDEAMHYDADYVRALEYGLPPTAGEGIGIDRLVMLLTDSPSI 490

Query: 340 NEVIWTPFSQSN 351
            +V+  P  +  
Sbjct: 491 RDVLLFPHMRPE 502


>gi|148265268|ref|YP_001231974.1| lysyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146398768|gb|ABQ27401.1| lysyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 494

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 175/368 (47%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR+ I + +R + V+N F+E+++ 
Sbjct: 139 LLPLPEKFHGLTDVETRYRQRYVDLIVNPEVREVFAKRSRIVNLIRAFMVKNDFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F T     + +   L+L+ +PE   K+L+  G +++F     +RN 
Sbjct: 199 MMQQIPGGAT-ARPFVTH---HNALDMELFLRIAPELYLKRLVVGGLDRVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ ++E LM     ++   A  V     FS+Q +  +     +
Sbjct: 255 GISVRHNPEFTMMEFYQAYATFEDLMNFTEELLCHVAHDVLGTLDFSYQGMPISFQRPWK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             TV EA   Y +ID  +        DR + +  A++ G+ +  D  +  + + I  E  
Sbjct: 315 RFTVKEAILEYGDIDAKS------LEDRDMAFAYAKRIGLDLPEDIGYGKLVTEIFEEVA 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     DP    RFE +    E+ NA  EL DP++Q+ 
Sbjct: 369 ETK--LIQPTFITAYPTEVSPLSRKNDHDPEIVDRFEFFCAGREMANAFSELNDPVDQKE 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K K   E + +DED++  L   +P ++G  +G DRLVML+T A +I +VI  
Sbjct: 427 RFLAQVAAKAKGDEEAHYMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDAPSIRDVILF 486

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 487 PQLRKEVK 494


>gi|188534902|ref|YP_001908699.1| lysyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238689741|sp|B2VF45|SYK_ERWT9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|188029944|emb|CAO97828.1| Lysyl tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 506

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 166/368 (45%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R + V+  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDDSRNTFKIRSQIMAGIRSFMVDRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MMQAIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V    +  + +   +     E
Sbjct: 266 GISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGSTVVPYGDQQFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       AQ  GI+V        + + I  E  
Sbjct: 326 KLTMKEAILKY-----RPQTDLADLADFDKSVAIAQSLGIKVEKSWGLGRLVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     DP  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDMDPEITDRFEFFIGGREIGNGFSELNDAQDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 499 PALRPGSK 506


>gi|191165676|ref|ZP_03027516.1| lysyl-tRNA synthetase LysU [Escherichia coli B7A]
 gi|309796860|ref|ZP_07691262.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|190904371|gb|EDV64080.1| lysyl-tRNA synthetase LysU [Escherichia coli B7A]
 gi|308119501|gb|EFO56763.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 505

 Score =  342 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|254527072|ref|ZP_05139124.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221538496|gb|EEE40949.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 512

 Score =  342 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 162/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R    S +R++     F+EI++ 
Sbjct: 142 LQPLPDKWHGLTDIEKRYRQRYLDLIVNPNSKNVFKTRAKCISFIRKWLDNRNFLEIETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+++  G EK++     +RN 
Sbjct: 202 ILQSEAGGA-EARPFITH---HNTLDIPLYLRIATELHLKRMVVGGFEKVYELGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M     +I+   A+     I ++QN   +      
Sbjct: 258 GISTRHNPEFTSVEIYEAYSDYFDMMNLTEELIKDVVADSCGSLIINYQNKEIDFSKPWL 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
            I++ +   +Y  ID  +        D        +   + +++  +T   + + +  +K
Sbjct: 318 RISMKDIVKKYTGIDFDSFSG-----DFLAAKQAVKNINVDLSNKVNTMGRLLNEVFEQK 372

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  +  +    +RFEL+    EL NA  EL+DP++QR
Sbjct: 373 VESK--LIEPTFVIDYPVEISPLARPHLDNKEIVQRFELFIVGRELANAFSELIDPVDQR 430

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R + +   + +   E + IDEDFL  L   MP + G+ +G DRL+ML+T + +I +VI 
Sbjct: 431 ERMQLQQSLRDEGDLEAHCIDEDFLNALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIP 490

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 491 FPLLKPE 497


>gi|218702794|ref|YP_002410423.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218372780|emb|CAR20658.1| lysine tRNA synthetase, inducible [Escherichia coli IAI39]
          Length = 505

 Score =  342 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|33152397|ref|NP_873750.1| lysyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|39932104|sp|Q7VLU5|SYK_HAEDU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33148620|gb|AAP96139.1| lysyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 498

 Score =  342 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 166/366 (45%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     +++  YR+R              + R+ + S +R++F+E  F+E+++ 
Sbjct: 144 LRPLPNKHQGLVDQEMRYRQRYLDLIANEQSRRTFVIRSQVVSGIRQFFLERGFMEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 204 MLQVIPGGAA-AKPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++       +     +     E
Sbjct: 260 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEQLLRKLALDILGTTAVPYGEYQFDFGQPFE 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y N      +   D  D       A++ GI V        + + I  E  
Sbjct: 320 RITMHDAIVKYGN-----GIAREDLDDIEKAVEIAKKLGIEVQKSWGLGAVVNAIFEEVA 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 375 EHQ--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAA 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    D+DF+  L   +P ++G  +G DRLVM+   A +I +VI  
Sbjct: 433 RFDAQVAAKDAGDDEAMFKDDDFVVALEHGLPPTAGEGLGIDRLVMIFANAPSIRDVILF 492

Query: 346 PFSQSN 351
           P  +  
Sbjct: 493 PAMRHK 498


>gi|47097268|ref|ZP_00234828.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254829645|ref|ZP_05234332.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254901220|ref|ZP_05261144.1| lysyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254914105|ref|ZP_05264117.1| lysyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254938415|ref|ZP_05270112.1| lysyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014368|gb|EAL05341.1| lysyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258602063|gb|EEW15388.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258611029|gb|EEW23637.1| lysyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293592703|gb|EFG00464.1| lysyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 498

 Score =  342 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 163/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      ++     +      
Sbjct: 260 GTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A   Y  +D      + +  +       A++  + V    T+  I +      +
Sbjct: 320 RIHMADAVKEYVGVDFWNVTSDEEALE------LAKKHDVPVTEHMTYGHILNEFFETYV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  
Sbjct: 432 RFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PTMKHR 497


>gi|323188712|gb|EFZ73997.1| lysyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 505

 Score =  342 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|16802274|ref|NP_463759.1| lysyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224500853|ref|ZP_03669202.1| lysyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224503815|ref|ZP_03672122.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|284803032|ref|YP_003414897.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284996173|ref|YP_003417941.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|38258394|sp|Q8YAB8|SYK_LISMO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|16409593|emb|CAD00755.1| lysyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|284058594|gb|ADB69535.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061640|gb|ADB72579.1| lysyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 498

 Score =  342 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 162/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      ++     +      
Sbjct: 260 GTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A   Y  +D      + +          A++  + V    T+  I +      +
Sbjct: 320 RIHMADAVKEYVGVDFWNVTSDEE------ARELAKKHDVPVTEHMTYGHILNEFFETYV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  
Sbjct: 432 RFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PTMKHR 497


>gi|332300671|ref|YP_004442592.1| Lysyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177734|gb|AEE13424.1| Lysyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 579

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 104/373 (27%), Positives = 161/373 (43%), Gaps = 35/373 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YRRR              +KR  I  S+R +F    
Sbjct: 144 LRPLPIVKAKDDQVFDGFTDPELRYRRRYVDLIVNDEVKGIFVKRTKIFQSMRNFFNARG 203

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           ++E+D+  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G E ++ F
Sbjct: 204 YLEVDTPVLQSIPGGAA-ARPFVTH---HNALDIPLYLRIANELYLKRLIVGGFEGVYEF 259

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNC 159
           +  +RN      H PEFT +E Y A++ Y  +M+    +I    + V             
Sbjct: 260 SRNFRNEGMDRTHNPEFTCMEIYVAYKDYRWMMQMTEQMIEHICQEVLGSTTIQVGEHTI 319

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                   +T+ +A   Y  +       N D  D   L    Q  G+ +        +  
Sbjct: 320 EFKPPYRRLTMIDAIQEYGGV-------NIDGMDEAELRKMCQSKGVEIDDTMGVGKLID 372

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            +     EP+  +   T +  YP   S L   +      T+RFEL+    EL NA  EL 
Sbjct: 373 ELFGAVAEPH--LVQPTFIIDYPKAMSPLTKEHRDRSDLTERFELFVNGKELANAYSELN 430

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+QRHRFE +++  ++  +E   ID DFL  L   MP +SG+ +G DRLVML+TG  +
Sbjct: 431 DPIDQRHRFEDQLRLSERGDDEAMYIDHDFLRALEFGMPPTSGMGIGMDRLVMLLTGQES 490

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 491 IQEVLLFPQMRPE 503


>gi|228471340|ref|ZP_04056141.1| lysyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228306841|gb|EEK15954.1| lysyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 579

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 105/373 (28%), Positives = 161/373 (43%), Gaps = 35/373 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YRRR              +KR  I  S+R +F    
Sbjct: 144 LRPLPIVKAKDDQVFDGFTDPELRYRRRYVDLIVNEEVKGIFMKRTKIFQSMRNFFNSRG 203

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           ++E+D+  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G E ++ F
Sbjct: 204 YLEVDTPVLQSIPGGAA-ARPFVTH---HNALDIPLYLRIANELYLKRLIVGGFEGVYEF 259

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNC 159
           +  +RN      H PEFT +E Y A++ Y  +M+    +I    + V             
Sbjct: 260 SRNFRNEGMDRTHNPEFTCMEIYVAYKDYRWMMQMTEQMIEHICQEVLGSTTIQVGEHTI 319

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                   +T+ +A   Y  +       N D  D   L    Q  G+ +        +  
Sbjct: 320 EFKPPYRRLTMIDAIQEYGGV-------NIDGMDEAELRKVCQAKGVEIDETMGVGKLID 372

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            +     EPN  +   T +  YP   S L   +      T+RFEL+    EL NA  EL 
Sbjct: 373 ELFGAVAEPN--LVQPTFIIDYPKAMSPLTKEHRDRSDLTERFELFVNGKELANAYSELN 430

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+QRHRFE +++  ++  +E   ID DFL  L   MP +SG+ +G DRLVML+TG  +
Sbjct: 431 DPIDQRHRFEDQLRLSERGDDEAMYIDHDFLRALEFGMPPTSGMGIGMDRLVMLLTGQES 490

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 491 IQEVLLFPQMRPE 503


>gi|193063477|ref|ZP_03044566.1| lysyl-tRNA synthetase LysS [Escherichia coli E22]
 gi|192930754|gb|EDV83359.1| lysyl-tRNA synthetase LysS [Escherichia coli E22]
          Length = 505

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLEQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|254832543|ref|ZP_05237198.1| lysyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 498

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 163/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      ++     +      
Sbjct: 260 GTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A   Y  +D      + +  +       A++  + V    T+  I +      +
Sbjct: 320 RIHMADAVKEYVGVDFWNVTSDEEALE------LAKKHDVPVTEHMTYGHILNEFFETYV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LVQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  
Sbjct: 432 RFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PTMKHR 497


>gi|323966690|gb|EGB62122.1| lysyl-tRNA synthetase [Escherichia coli M863]
 gi|327251652|gb|EGE63338.1| lysyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 505

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|157372123|ref|YP_001480112.1| lysyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980070|sp|A8GIP4|SYK_SERP5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157323887|gb|ABV42984.1| lysyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 505

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 161/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I +++R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRKTFQVRSQIMAAMRNFMVERGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R     V       + +   +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLTQNVLGNTQVQYGDEVFDFGKPFV 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       A+  GI+V        + + I  E  
Sbjct: 326 KLTMTEAIKKY-----RPETDLADLADMGKAVAIAESIGIKVEKSWGLGRVVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +   K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQANAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|226309769|ref|YP_002769663.1| lysyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226092717|dbj|BAH41159.1| lysyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 506

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 168/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I +S+R Y     ++E+++ 
Sbjct: 152 LRPLPEKYHGLKDIETRYRKRYVDLIVNPEVRDTFITRSRILTSMRRYLDNLGYLEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 212 TLHAIAGGAS-ARPFITH---HNALDMQLYMRIAIELHLKRLIVGGLEKVYEIGRVYRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M     ++   A+ V       +Q    +   +  
Sbjct: 268 GISTRHNPEFTMIELYEAYADYQDIMSLTEEMVAHIAQEVLGTMKIQYQGNEIDLTPKWR 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    + +            A++ G+ V    T+  + +    +K+
Sbjct: 328 RVHMVDLIKENLGVDFWKEMSD------DEARALAKEHGVSVEPHHTFGHVVNEFFEQKL 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 382 EHT--LIQPTFVYGHPVAISPLAKKNDQDPRFTDRFELFIVAREHANAFTELNDPIDQRE 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK+   +E + +D+DF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 440 RFEAQLLEKEAGNDEAHDMDDDFIEALEYGMPPTGGLGIGIDRLVMLLTNSPSIRDVLLF 499

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 500 PHMRNR 505


>gi|223044407|ref|ZP_03614440.1| lysyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|314932739|ref|ZP_07840109.1| lysine--tRNA ligase [Staphylococcus caprae C87]
 gi|222442196|gb|EEE48308.1| lysyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|313654569|gb|EFS18321.1| lysine--tRNA ligase [Staphylococcus caprae C87]
          Length = 495

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 168/364 (46%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +  F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNKQGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A+        S+ +   +  S   
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIAQEVFGSAKVSYNDEEIDLESSWR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      ++        D          A++ GI +  +  +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVNF------YDVKTDEEAVSLAKEHGIEITENMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EET--LIQPTFIYGHPIEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK++  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKEQGNDEAHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|300921221|ref|ZP_07137594.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300411827|gb|EFJ95137.1| lysyl-tRNA synthetase [Escherichia coli MS 115-1]
          Length = 505

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|307129434|ref|YP_003881450.1| Lysyl-tRNA synthetase (class II) [Dickeya dadantii 3937]
 gi|306526963|gb|ADM96893.1| Lysyl-tRNA synthetase (class II) [Dickeya dadantii 3937]
          Length = 505

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANEESRHTFRVRSQIMAGIRQFMVGRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       + +   +     E
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGATEVQYGDQVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D          A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETNMADLDSFDAAKAIAESIGIKVEKSWGLGRIVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DRLVML T ++ I +VI  
Sbjct: 439 RFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRLVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|215488190|ref|YP_002330621.1| lysyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|215266262|emb|CAS10691.1| lysine tRNA synthetase, constitutive [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 505

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y      +  D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RSETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|301057954|ref|ZP_07199011.1| lysine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300447921|gb|EFK11629.1| lysine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 493

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 169/367 (46%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +     D    YR+R              + R+ I  ++R++F+   F+E+++ 
Sbjct: 139 MRPLPEKWHGLTDVETRYRQRYVDLIMNDPVRDVFVTRSRIIQAIRQFFISRDFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F T     + +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMQPIPGGAT-ARPFITH---HNALDMDLYLRVAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +YE LM     +      +VA  ++  +Q    +      
Sbjct: 255 GLSIKHNPEFTMMEFYMAYATYEDLMVLTEEVFGYLLDQVAGGQVIEYQGKRIDFTPPWN 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + ++      I+            R      A+   I V   D    I +++    +
Sbjct: 315 RIPLFDSLRETGEIEENIF------EGREPAAALARSLAIPVQERDGHGQILTKLFDHLV 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP+  ++  T +  YP   S L+     DP  T RFEL+    E+ NA  EL DP++Q+ 
Sbjct: 369 EPH--LSNPTFVTGYPTEVSPLSRRNDRDPTLTDRFELFIGGREIANAFTELNDPVDQKA 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++  +     E   +DED++  L   MP ++G  +G DR+VML+T + +I +VI  
Sbjct: 427 RFESQVALRDAGDKEALFMDEDYVTALEYGMPPTAGEGIGIDRVVMLLTDSPSIRDVILF 486

Query: 346 PFSQSNQ 352
           P  ++ +
Sbjct: 487 PQMRARE 493


>gi|258646083|ref|ZP_05733552.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403458|gb|EEW97005.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 631

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 94/369 (25%), Positives = 170/369 (46%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR  +  ++R ++  + F+E+++ 
Sbjct: 135 LRPLPEKWHGLTDKEQRYRQRYLDLIANPDVRKTFIKRANMLQAIRNWYTAHGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + R F T     + +   +YL+ +PE   K+LL  G E+IF     +RN 
Sbjct: 195 VLQPLYGGA-NARPFMTHF---NALDMTMYLRIAPELYLKRLLVGGYERIFEITRNFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   + ++     I+   A        F+++    +      
Sbjct: 251 GMDTRHNPEFTAIETYQAYGDIDDVIDQTEQIVAACAMASYGTTKFTYEGTEIDVAGPWP 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+AEA  +Y   D                     +  +     D +  + +    + +
Sbjct: 311 RLTMAEAVKKYTGEDFDAC------KTIEEARAICDRLHVEYGEFDGFGKLLAAAFDDYV 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +     +  +P   S L+ + P DPR+T RFE Y    EL N   EL DP++QR 
Sbjct: 365 EEH--LIQPVHITEHPIEVSPLSKLDPKDPRYTIRFESYIYGRELANGFSELNDPLDQRA 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E++   +E +PIDEDFL  L   MP + G+ +G DRL ML+T +++I +V+  
Sbjct: 423 RFEMQVEEREHGDDEAHPIDEDFLTALEYGMPPTGGLGIGLDRLFMLMTNSSSIRDVLLF 482

Query: 346 PFSQSNQEE 354
           P  +   ++
Sbjct: 483 PAMRPEGDQ 491


>gi|218550137|ref|YP_002383928.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218357678|emb|CAQ90319.1| lysine tRNA synthetase, constitutive [Escherichia fergusonii ATCC
           35469]
 gi|323978819|gb|EGB73900.1| lysyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324115094|gb|EGC09059.1| lysyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|325498451|gb|EGC96310.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 505

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|254416475|ref|ZP_05030227.1| lysyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196176679|gb|EDX71691.1| lysyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 516

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 154/366 (42%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +++R Y  +  FIEI++ 
Sbjct: 154 LLPLPDKWHGLTDTEKRYRQRYVDLMVNPTVRETFRRRAKITAAIRRYLEDRGFIEIETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
                 G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 214 VFSTEAGGA-EARPFIT---YHNTLEMELYLRIATELHLKRLIVGGFEKVFELGRIFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M    N+I    + +      ++Q    +      
Sbjct: 270 GISTRHNPEFTSIEVYQAYADYNDMMTLTENLITTVTQESLTTLEITYQGETIDFTPPWR 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            +T+ E       +D                 + A++ GI    D      + +    +K
Sbjct: 330 RVTMHELVQEVTGLDFNQF------KTFDEAKIAAKKVGIEGVEDCPSLGKLLNECFEQK 383

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S LA  + + P   +RFEL+    E  N+  EL DPI+QR
Sbjct: 384 CEET--LIQPTFIVDFPIEISPLAKPHRSKPGLVERFELFMAGRETANSFSELTDPIDQR 441

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   K     E   +DEDFLA L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 442 ERLEAQAARKAAGDLEAQGVDEDFLAALEYGMPPTGGLGIGIDRLVMLLTDSASIRDVIA 501

Query: 345 TPFSQS 350
            P  +S
Sbjct: 502 FPLLKS 507


>gi|261820185|ref|YP_003258291.1| lysyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261604198|gb|ACX86684.1| lysyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 505

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + +++R + V++ F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFRIRSNVMAAIRRFMVDHGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQAIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+    N+ R    +V       + +   +     E
Sbjct: 266 GISPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGSTTVVYGDQTFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D          AQ  GI++        I + I  E  
Sbjct: 326 KLTMREAICKY-----RPETNVADLDCLEKATAIAQSLGIKIEKSWGLGRIVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESS--LIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFAQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|16799337|ref|NP_469605.1| lysyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|38258397|sp|Q92F47|SYK_LISIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|16412689|emb|CAC95493.1| lysyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 498

 Score =  342 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 164/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      ++   + +      
Sbjct: 260 GTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTKITYGEYDVDLTPNWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A   Y  +D      + +       +  A++  + V    T+  I +      +
Sbjct: 320 RIHMADAVKEYVGVDFWNVTSDEE------AHELAKKHDVAVTEHMTYGHILNEFFETYV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  
Sbjct: 432 RFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PTMKHR 497


>gi|332086814|gb|EGI91950.1| lysyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 505

 Score =  342 bits (876), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMHEAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|256025006|ref|ZP_05438871.1| lysyl-tRNA synthetase [Escherichia sp. 4_1_40B]
          Length = 505

 Score =  342 bits (876), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EVH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|253999564|ref|YP_003051627.1| lysyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|313201598|ref|YP_004040256.1| lysyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|253986243|gb|ACT51100.1| lysyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|312440914|gb|ADQ85020.1| lysyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 504

 Score =  341 bits (875), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R + + N+F+E+++ 
Sbjct: 149 LRPLPEKFHGLSDQETKYRQRYVDLIVSDDTRQTFIARSKIVAAIRSFMLGNEFLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  +  + F T     + +   +Y++ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAS-AKPFITH---HNALDMQMYMRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM    N IR AA  A    +  +Q    +     +
Sbjct: 265 GVSVRHNPEFTMMEFYAAYTDYKWLMDFTENCIRAAAIAARGTAVLEYQGRTLDLSQPFQ 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+  A  +YA              D   L  + ++ G+          +   +  E  
Sbjct: 325 RLTIVGAIQKYA-----PAYTLEQLNDAAFLRTELKKFGVEAFAHAGLGALQLALFEETA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T+RFEL+    E+ N   EL D  +Q  
Sbjct: 380 ESQ--LWEPTYIIDYPVEVSPLARASDTNPEITERFELFVTGREIANGFSELNDAEDQAA 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    D DF+  L   MP + G  +G DRLVML+T + +I +VI  
Sbjct: 438 RFHAQVAAKEAGDDEAMYYDADFIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PHMRPE 503


>gi|312965748|ref|ZP_07779977.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312289722|gb|EFR17613.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
          Length = 505

 Score =  341 bits (875), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGIMVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|260857013|ref|YP_003230904.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O26:H11
           str. 11368]
 gi|257755662|dbj|BAI27164.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O26:H11
           str. 11368]
 gi|323154770|gb|EFZ40968.1| lysyl-tRNA synthetase [Escherichia coli EPECa14]
          Length = 505

 Score =  341 bits (875), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|157414225|ref|YP_001485091.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166980068|sp|A8G7C4|SYK_PROM2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157388800|gb|ABV51505.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 512

 Score =  341 bits (875), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 162/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R    S +R++     F+EI++ 
Sbjct: 142 LQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNVFKTRAKCISFIRKWLDNRNFLEIETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+++  G EK++     +RN 
Sbjct: 202 ILQSEAGGA-EARPFITH---HNTLDIPLYLRIATELHLKRMVVGGFEKVYEMGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M     +I+   A+     I ++QN   +      
Sbjct: 258 GISTRHNPEFTSVEIYEAYSDYFDMMNLTEELIKDVVADSCGSLIINYQNKEIDFSKPWL 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
            I++ +   +Y  ID  +        D        +   + +++  +T   + + +  +K
Sbjct: 318 RISMKDIVKKYTGIDFDSFSG-----DFLAAKQAVKNINVDLSNKVNTMGRLLNEVFEQK 372

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  +  +    +RFEL+    EL NA  EL+DP++QR
Sbjct: 373 VESK--LIEPTFVIDYPVEISPLARPHFDNKEIVQRFELFIVGRELANAFSELIDPVDQR 430

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R + +   + +   E + IDEDFL  L   MP + G+ +G DRL+ML+T + +I +VI 
Sbjct: 431 ERMQLQQSLRDEGDLEAHCIDEDFLNALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIP 490

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 491 FPLLKPE 497


>gi|16130792|ref|NP_417366.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. MG1655]
 gi|26249304|ref|NP_755344.1| lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|89109669|ref|AP_003449.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. W3110]
 gi|91212268|ref|YP_542254.1| lysyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110643038|ref|YP_670768.1| lysyl-tRNA synthetase [Escherichia coli 536]
 gi|117625121|ref|YP_854109.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|157162350|ref|YP_001459668.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|170018864|ref|YP_001723818.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170082451|ref|YP_001731771.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. DH10B]
 gi|188493495|ref|ZP_03000765.1| lysyl-tRNA synthetase LysS [Escherichia coli 53638]
 gi|191173251|ref|ZP_03034782.1| lysyl-tRNA synthetase [Escherichia coli F11]
 gi|194436902|ref|ZP_03069002.1| lysyl-tRNA synthetase LysS [Escherichia coli 101-1]
 gi|209920344|ref|YP_002294428.1| lysyl-tRNA synthetase [Escherichia coli SE11]
 gi|218559883|ref|YP_002392796.1| lysyl-tRNA synthetase [Escherichia coli S88]
 gi|218691015|ref|YP_002399227.1| lysyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218701599|ref|YP_002409228.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218706396|ref|YP_002413915.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
 gi|227888438|ref|ZP_04006243.1| lysine tRNA synthetase, constitutive [Escherichia coli 83972]
 gi|237706467|ref|ZP_04536948.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|238902015|ref|YP_002927811.1| lysine tRNA synthetase, constitutive [Escherichia coli BW2952]
 gi|253772269|ref|YP_003035100.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254037933|ref|ZP_04871991.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|254162802|ref|YP_003045910.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256024600|ref|ZP_05438465.1| lysyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|291284210|ref|YP_003501028.1| Lysyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|293406388|ref|ZP_06650314.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293412248|ref|ZP_06654971.1| lysyl-tRNA synthetase [Escherichia coli B354]
 gi|293416143|ref|ZP_06658783.1| lysyl-tRNA synthetase [Escherichia coli B185]
 gi|298382124|ref|ZP_06991721.1| lysS [Escherichia coli FVEC1302]
 gi|300896215|ref|ZP_07114764.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300925130|ref|ZP_07141044.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300928175|ref|ZP_07143717.1| lysyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300947610|ref|ZP_07161782.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300954271|ref|ZP_07166734.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300980317|ref|ZP_07174971.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300995679|ref|ZP_07181207.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301027418|ref|ZP_07190755.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301027813|ref|ZP_07191118.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301049327|ref|ZP_07196297.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|301643761|ref|ZP_07243799.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|306812208|ref|ZP_07446406.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|307139577|ref|ZP_07498933.1| lysyl-tRNA synthetase [Escherichia coli H736]
 gi|312972869|ref|ZP_07787042.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331643579|ref|ZP_08344710.1| lysine--tRNA ligase [Escherichia coli H736]
 gi|331648635|ref|ZP_08349723.1| lysine--tRNA ligase [Escherichia coli M605]
 gi|331659019|ref|ZP_08359961.1| lysine--tRNA ligase [Escherichia coli TA206]
 gi|331664462|ref|ZP_08365368.1| lysine--tRNA ligase [Escherichia coli TA143]
 gi|331684515|ref|ZP_08385107.1| lysine--tRNA ligase [Escherichia coli H299]
 gi|67473140|sp|P0A8N3|SYK1_ECOLI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|67473141|sp|P0A8N4|SYK1_ECOL6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|26109712|gb|AAN81917.1|AE016766_5 Lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|146341|gb|AAA23959.1| herC protein [Escherichia coli]
 gi|887840|gb|AAA83071.1| lysyl tRNA synthetase (LysRS), constitutive [Escherichia coli]
 gi|1789256|gb|AAC75928.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. MG1655]
 gi|85675702|dbj|BAE76955.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K12
           substr. W3110]
 gi|91073842|gb|ABE08723.1| lysine tRNA synthetase [Escherichia coli UTI89]
 gi|110344630|gb|ABG70867.1| lysyl-tRNA synthetase [Escherichia coli 536]
 gi|115514245|gb|ABJ02320.1| lysine tRNA synthetase, constitutive [Escherichia coli APEC O1]
 gi|157068030|gb|ABV07285.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|169753792|gb|ACA76491.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|169890286|gb|ACB03993.1| lysine tRNA synthetase, constitutive [Escherichia coli str. K-12
           substr. DH10B]
 gi|188488694|gb|EDU63797.1| lysyl-tRNA synthetase LysS [Escherichia coli 53638]
 gi|190906502|gb|EDV66110.1| lysyl-tRNA synthetase [Escherichia coli F11]
 gi|194424384|gb|EDX40371.1| lysyl-tRNA synthetase LysS [Escherichia coli 101-1]
 gi|209760614|gb|ACI78619.1| lysine tRNA synthetase [Escherichia coli]
 gi|209913603|dbj|BAG78677.1| lysyl-tRNA synthase [Escherichia coli SE11]
 gi|218366652|emb|CAR04406.1| lysine tRNA synthetase, constitutive [Escherichia coli S88]
 gi|218371585|emb|CAR19424.1| lysine tRNA synthetase, constitutive [Escherichia coli IAI39]
 gi|218428579|emb|CAR09360.1| lysine tRNA synthetase, constitutive [Escherichia coli ED1a]
 gi|218433493|emb|CAR14396.1| lysine tRNA synthetase, constitutive [Escherichia coli UMN026]
 gi|222034585|emb|CAP77327.1| Lysyl-tRNA synthetase [Escherichia coli LF82]
 gi|226839557|gb|EEH71578.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226899507|gb|EEH85766.1| lysyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|227834707|gb|EEJ45173.1| lysine tRNA synthetase, constitutive [Escherichia coli 83972]
 gi|238861694|gb|ACR63692.1| lysine tRNA synthetase, constitutive [Escherichia coli BW2952]
 gi|242378422|emb|CAQ33202.1| lysyl tRNA synthetase (LysRSs), constitutive, subunit of lysyl-tRNA
           synthetase, constitutive [Escherichia coli BL21(DE3)]
 gi|253323313|gb|ACT27915.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974703|gb|ACT40374.1| lysine tRNA synthetase, constitutive [Escherichia coli B str.
           REL606]
 gi|253978869|gb|ACT44539.1| lysine tRNA synthetase, constitutive [Escherichia coli BL21(DE3)]
 gi|260448064|gb|ACX38486.1| lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|281179895|dbj|BAI56225.1| lysyl-tRNA synthetase [Escherichia coli SE15]
 gi|284922838|emb|CBG35927.1| lysyl-tRNA synthetase [Escherichia coli 042]
 gi|290764083|gb|ADD58044.1| Lysyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|291426394|gb|EFE99426.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291432332|gb|EFF05314.1| lysyl-tRNA synthetase [Escherichia coli B185]
 gi|291469019|gb|EFF11510.1| lysyl-tRNA synthetase [Escherichia coli B354]
 gi|294492859|gb|ADE91615.1| lysyl-tRNA synthetase LysS [Escherichia coli IHE3034]
 gi|298277264|gb|EFI18780.1| lysS [Escherichia coli FVEC1302]
 gi|299879075|gb|EFI87286.1| lysyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300298926|gb|EFJ55311.1| lysyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300304787|gb|EFJ59307.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300318732|gb|EFJ68516.1| lysyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300359949|gb|EFJ75819.1| lysyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300394926|gb|EFJ78464.1| lysyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300409325|gb|EFJ92863.1| lysyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300418732|gb|EFK02043.1| lysyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300452807|gb|EFK16427.1| lysyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300463815|gb|EFK27308.1| lysyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|301077860|gb|EFK92666.1| lysyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|305854246|gb|EFM54684.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|307554866|gb|ADN47641.1| lysine tRNA synthetase [Escherichia coli ABU 83972]
 gi|307625537|gb|ADN69841.1| lysyl-tRNA synthetase [Escherichia coli UM146]
 gi|309703250|emb|CBJ02585.1| lysyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310332811|gb|EFQ00025.1| lysyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|312947423|gb|ADR28250.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315137489|dbj|BAJ44648.1| lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|315289448|gb|EFU48843.1| lysyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315293878|gb|EFU53230.1| lysyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315295677|gb|EFU54997.1| lysyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|315614955|gb|EFU95593.1| lysyl-tRNA synthetase [Escherichia coli 3431]
 gi|320195008|gb|EFW69637.1| lysyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|320656576|gb|EFX24472.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320662096|gb|EFX29497.1| lysyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|323935879|gb|EGB32178.1| lysyl-tRNA synthetase [Escherichia coli E1520]
 gi|323941590|gb|EGB37770.1| lysyl-tRNA synthetase [Escherichia coli E482]
 gi|323951672|gb|EGB47547.1| lysyl-tRNA synthetase [Escherichia coli H252]
 gi|323957390|gb|EGB53112.1| lysyl-tRNA synthetase [Escherichia coli H263]
 gi|323960814|gb|EGB56435.1| lysyl-tRNA synthetase [Escherichia coli H489]
 gi|324005541|gb|EGB74760.1| lysyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324011761|gb|EGB80980.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324017286|gb|EGB86505.1| lysyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|330908922|gb|EGH37436.1| lysyl-tRNA synthetase (class 2) [Escherichia coli AA86]
 gi|331037050|gb|EGI09274.1| lysine--tRNA ligase [Escherichia coli H736]
 gi|331042382|gb|EGI14524.1| lysine--tRNA ligase [Escherichia coli M605]
 gi|331053601|gb|EGI25630.1| lysine--tRNA ligase [Escherichia coli TA206]
 gi|331058393|gb|EGI30374.1| lysine--tRNA ligase [Escherichia coli TA143]
 gi|331078130|gb|EGI49336.1| lysine--tRNA ligase [Escherichia coli H299]
 gi|332344785|gb|AEE58119.1| lysyl-tRNA synthetase LysS [Escherichia coli UMNK88]
          Length = 505

 Score =  341 bits (875), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|194431772|ref|ZP_03064063.1| lysyl-tRNA synthetase LysS [Shigella dysenteriae 1012]
 gi|194420128|gb|EDX36206.1| lysyl-tRNA synthetase LysS [Shigella dysenteriae 1012]
 gi|320182208|gb|EFW57111.1| lysyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|332087728|gb|EGI92855.1| lysyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 505

 Score =  341 bits (875), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMHEAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|332826946|gb|EGJ99743.1| lysyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 575

 Score =  341 bits (875), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 101/374 (27%), Positives = 168/374 (44%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  + +S+RE+   + 
Sbjct: 142 LRPLPVVKVKDGVTYDGFTDPEQRYRQRYVDLIVNEGVKDTFIKRTKVFNSMREFLNGHG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           +IE+D+  LQ  PG  T  R F T     + +  PLYL+ + E   K+L+  G + ++ F
Sbjct: 202 YIEVDTPVLQSIPGGAT-ARPFITH---HNALDIPLYLRIANELYLKRLIVGGFDGVYEF 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNC 159
           +  +RN      H PEFT++E+Y A++ Y  +M     ++      V             
Sbjct: 258 SRNFRNEGMDRTHNPEFTVMEFYAAYKDYNWMMDFTERMLEKICMDVHGTTKVKMGKNEI 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    +T+ ++   +  +D+    +         L    +Q G+          +  
Sbjct: 318 DYKAPYPRVTMIDSIKHFTGVDISGMNEV-------QLRDVCKQLGVEQDETMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  +K E N      T +  YP   S L   +  +P  T+RFEL     EL NA  EL 
Sbjct: 371 AIFGDKCEGNY--IQPTFIIDYPVEMSPLTKKHRNNPELTERFELMVNGKELANAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+QR RFE +++  +K  +E   ID+DFL  L   MP +SGI +G DRLVM +TG  +
Sbjct: 429 DPIDQRARFEDQLKLSEKGDDEAMFIDQDFLRALEYGMPPTSGIGIGMDRLVMFMTGQES 488

Query: 339 INEVIWTPFSQSNQ 352
           I EV++ P  +  +
Sbjct: 489 IQEVMFFPQMRPEK 502


>gi|332886410|gb|EGK06654.1| lysyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 575

 Score =  341 bits (875), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  + +S+RE+   + 
Sbjct: 142 LRPLPVVKVKDGVTYDGFTDPEQRYRQRYVDLVVNDNVKDVFIKRTKVFNSMREFLNGHG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           +IE+D+  LQ  PG  T  R F T     + +  PLYL+ + E   K+L+  G + ++ F
Sbjct: 202 YIEVDTPVLQSIPGGAT-ARPFITH---HNALDIPLYLRIANELYLKRLIVGGFDGVYEF 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNC 159
           +  +RN      H PEFT++E+Y A++ Y  +M     ++     +V         +   
Sbjct: 258 SRNFRNEGMDRTHNPEFTVMEFYAAYKDYNWMMDFTERMLEKICTDVHGTTKVKMGDKEI 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    +T+ ++   +   D+          D   L    +Q  I          +  
Sbjct: 318 DYKAPYPRVTMIDSIKHFTGFDISGM-------DEDQLRDVCKQLDIEQDATMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  EK E N      T +  YP   S L   +  +P  T+RFEL     EL NA  EL 
Sbjct: 371 AIFGEKCEGNY--IQPTFIIDYPVEMSPLTKKHRNNPELTERFELMVNGKELANAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+QR RFE +++  +K  +E   ID+DFL  L   MP +SGI +G DRLVM +TG  +
Sbjct: 429 DPIDQRARFEDQLKLSEKGDDEAMFIDQDFLRALEYGMPPTSGIGIGMDRLVMFMTGQES 488

Query: 339 INEVIWTPFSQSNQ 352
           I EV++ P  +  +
Sbjct: 489 IQEVMFFPQMRPEK 502


>gi|82545487|ref|YP_409434.1| lysyl-tRNA synthetase [Shigella boydii Sb227]
 gi|123728331|sp|Q31WF2|SYK_SHIBS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81246898|gb|ABB67606.1| lysine tRNA synthetase, constitutive [Shigella boydii Sb227]
 gi|332090907|gb|EGI95998.1| lysyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 505

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|163754082|ref|ZP_02161205.1| lysyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161326296|gb|EDP97622.1| lysyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 561

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 97/373 (26%), Positives = 169/373 (45%), Gaps = 33/373 (8%)

Query: 3   QIPSQPWW-------NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEI 44
            +P +          + +  YR+R              +KR  + +++R +F +  + E+
Sbjct: 140 PLPKEKDGVVYDKFDDPEQRYRQRYADLVVNPEVKEVFVKRTKLFNAMRNFFNDAGYFEV 199

Query: 45  DSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
           ++  LQ  PG     R F T     + +  PLY++ + E   K+L+  G + ++ F+  +
Sbjct: 200 ETPILQPIPGGAA-ARPFVTH---HNSLNIPLYMRIANELYLKRLIVGGFDGVYEFSKNF 255

Query: 105 RNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFS 163
           RN      H PEFT +E Y A++ Y  +M+   +++   A         +F     +  +
Sbjct: 256 RNEGMDRTHNPEFTAMEIYVAYKDYNWMMEFTESLLEHCAIAVNGTTEATFGEHKIDFKA 315

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             + +T+ ++   +   D+              L   A+  GI V        +   I  
Sbjct: 316 PYKRVTMTQSIIDFTGFDITG-------KSEEELREAAKSMGIEVDETMGKGKLIDEIFG 368

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL DPI+
Sbjct: 369 EKCEGNY--IEPTFITDYPKEMSPLCKEHRENPELTERFELMVCGKEIANAYSELNDPID 426

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE +++  +K  +E   ID DF+  L   MP +SG+ +G DRL+M +T   +I EV
Sbjct: 427 QRERFEAQLKLSEKGDDEAMFIDNDFIRALEYGMPPTSGLGIGMDRLIMYLTNNASIQEV 486

Query: 343 IWTPFSQSNQEEI 355
           ++ P  +  +++I
Sbjct: 487 LFFPQMKPERKQI 499


>gi|241759648|ref|ZP_04757749.1| lysine--tRNA ligase [Neisseria flavescens SK114]
 gi|241320020|gb|EER56401.1| lysine--tRNA ligase [Neisseria flavescens SK114]
          Length = 503

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 163/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     S+     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRAVNGTAKISYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+  A  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILGAIKKY-----NPHYTDEQLNDEEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    + P  T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIIDYPVEVSPLARASDSKPGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|123967040|ref|YP_001012121.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166229816|sp|A2BZ03|SYK_PROM5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123201406|gb|ABM73014.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 512

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 163/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R    S +R +  E  F+EI++ 
Sbjct: 142 LQPLPDKWHGLTDIEKRYRQRYLDLIVNPLSKTVFKTRAKCISLIRRWLDEKNFLEIETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+++  G EK++     +RN 
Sbjct: 202 ILQSEAGGA-EARPFITH---HNTLDIPLYLRIATELHLKRMVVGGFEKVYELGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA-AEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A  +Y  +M    ++I+       +  + ++Q+   +     +
Sbjct: 258 GVSTKHNPEFTSVEIYQAFSNYIDMMNLTEDLIKNIVLSCCDSLVINYQDKVIDFSKPWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            I++      Y  ID  +        D +     +++  I ++        + + +  +K
Sbjct: 318 RISMKNVVKEYTGIDFDSFDG-----DLNKAKKFSEEINIEISPKINTLGRLLNEVFEQK 372

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  +P +    +RFEL+    EL NA  EL+DP++QR
Sbjct: 373 VESQ--LIEPTFVTDYPIEISPLARRHPKNKEMVQRFELFIAGRELANAFSELIDPVDQR 430

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R + +   +     E + IDEDFL  L   MP + G+ +G DRLVML+T +++I +VI 
Sbjct: 431 QRMQLQQSLRDAGDLEAHCIDEDFLQALEIGMPPTGGLGIGIDRLVMLLTNSSSIRDVIP 490

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 491 FPLLKPE 497


>gi|293394609|ref|ZP_06638903.1| lysine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291422918|gb|EFE96153.1| lysine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 505

 Score =  341 bits (875), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 161/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R + V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANEESRNTFKVRSQIMSGIRNFMVGRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF-SEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+    K           F    E
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGKTAVQYGDEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       A+  GI+V        + + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDLADLDDFDKAKAIAESIGIKVEKSWGLGRVVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQVAAKDAGDDEAMFYDEDYVTSLEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPTK 505


>gi|330447414|ref|ZP_08311063.1| lysyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491605|dbj|GAA05560.1| lysyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 502

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 157/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + V   F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFVVRSKVVSAIRNFMVSKGFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     ++   A  V       +            
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIAMDVLGSSKMPYGEYEVEFAGPYA 314

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y  +      L      DR L+   A+   + V    T   +   I  E 
Sbjct: 315 RMSMLDAIKKYNPDHAEIQALTYEGVADRELMVKIAKSVHVDVEDFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPQ--LMQPTFITEYPADISPLARRNDENPFITDRFEFFIGGREVANGFSELNDAQDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 433 QRFKAQVDAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|315274625|ref|ZP_07869480.1| lysyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313615745|gb|EFR89018.1| lysyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 498

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 162/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      ++     +      
Sbjct: 260 GTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A   Y  +D      + +          A++  + V    T+  I +      +
Sbjct: 320 RIHMADAVKEYVGVDFWNVTSDEE------ARELAKKHDVPVTEHMTYGHILNEFFETYV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  
Sbjct: 432 RFEAQIKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PTMKHR 497


>gi|24114145|ref|NP_708655.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30064202|ref|NP_838373.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|74313449|ref|YP_311868.1| lysyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|110806794|ref|YP_690314.1| lysyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157155962|ref|YP_001464228.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|187730899|ref|YP_001881660.1| lysyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|191165971|ref|ZP_03027807.1| lysyl-tRNA synthetase LysS [Escherichia coli B7A]
 gi|193070569|ref|ZP_03051508.1| lysyl-tRNA synthetase LysS [Escherichia coli E110019]
 gi|194426362|ref|ZP_03058917.1| lysyl-tRNA synthetase LysS [Escherichia coli B171]
 gi|218555438|ref|YP_002388351.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218696485|ref|YP_002404152.1| lysyl-tRNA synthetase [Escherichia coli 55989]
 gi|256019312|ref|ZP_05433177.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|260845558|ref|YP_003223336.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O103:H2
           str. 12009]
 gi|260869567|ref|YP_003235969.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O111:H-
           str. 11128]
 gi|293449212|ref|ZP_06663633.1| lysyl-tRNA synthetase [Escherichia coli B088]
 gi|300815659|ref|ZP_07095883.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300820693|ref|ZP_07100844.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300906561|ref|ZP_07124252.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|301303047|ref|ZP_07209174.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301327290|ref|ZP_07220546.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|307310491|ref|ZP_07590139.1| lysyl-tRNA synthetase [Escherichia coli W]
 gi|309793961|ref|ZP_07688386.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|331654387|ref|ZP_08355387.1| lysine--tRNA ligase [Escherichia coli M718]
 gi|331669624|ref|ZP_08370470.1| lysine--tRNA ligase [Escherichia coli TA271]
 gi|331678876|ref|ZP_08379550.1| lysine--tRNA ligase [Escherichia coli H591]
 gi|332280426|ref|ZP_08392839.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|39932371|sp|Q83JU6|SYK1_SHIFL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123047932|sp|Q0T106|SYK_SHIF8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238691768|sp|B2U0Q7|SYK_SHIB3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24053284|gb|AAN44362.1| lysine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30042459|gb|AAP18183.1| lysine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|73856926|gb|AAZ89633.1| lysine tRNA synthetase, constitutive [Shigella sonnei Ss046]
 gi|110616342|gb|ABF05009.1| lysine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157077992|gb|ABV17700.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|187427891|gb|ACD07165.1| lysyl-tRNA synthetase LysS [Shigella boydii CDC 3083-94]
 gi|190903919|gb|EDV63632.1| lysyl-tRNA synthetase LysS [Escherichia coli B7A]
 gi|192956152|gb|EDV86616.1| lysyl-tRNA synthetase LysS [Escherichia coli E110019]
 gi|194415670|gb|EDX31937.1| lysyl-tRNA synthetase LysS [Escherichia coli B171]
 gi|218353217|emb|CAU99132.1| lysine tRNA synthetase, constitutive [Escherichia coli 55989]
 gi|218362206|emb|CAQ99824.1| lysine tRNA synthetase, constitutive [Escherichia coli IAI1]
 gi|257760705|dbj|BAI32202.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O103:H2
           str. 12009]
 gi|257765923|dbj|BAI37418.1| lysine tRNA synthetase LysS, constitutive [Escherichia coli O111:H-
           str. 11128]
 gi|281602222|gb|ADA75206.1| Lysyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|291322302|gb|EFE61731.1| lysyl-tRNA synthetase [Escherichia coli B088]
 gi|300401600|gb|EFJ85138.1| lysyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300526957|gb|EFK48026.1| lysyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300531588|gb|EFK52650.1| lysyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300841711|gb|EFK69471.1| lysyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300846153|gb|EFK73913.1| lysyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|306909386|gb|EFN39881.1| lysyl-tRNA synthetase [Escherichia coli W]
 gi|308122368|gb|EFO59630.1| lysyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|313647929|gb|EFS12375.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|315062194|gb|ADT76521.1| lysine tRNA synthetase, constitutive [Escherichia coli W]
 gi|315256772|gb|EFU36740.1| lysyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|320175923|gb|EFW51001.1| lysyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320184567|gb|EFW59368.1| lysyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320202549|gb|EFW77119.1| lysyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323162520|gb|EFZ48370.1| lysyl-tRNA synthetase [Escherichia coli E128010]
 gi|323167905|gb|EFZ53595.1| lysyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323173887|gb|EFZ59516.1| lysyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323180333|gb|EFZ65885.1| lysyl-tRNA synthetase [Escherichia coli 1180]
 gi|323183443|gb|EFZ68840.1| lysyl-tRNA synthetase [Escherichia coli 1357]
 gi|323377222|gb|ADX49490.1| lysyl-tRNA synthetase [Escherichia coli KO11]
 gi|323946625|gb|EGB42648.1| lysyl-tRNA synthetase [Escherichia coli H120]
 gi|324119930|gb|EGC13809.1| lysyl-tRNA synthetase [Escherichia coli E1167]
 gi|331047769|gb|EGI19846.1| lysine--tRNA ligase [Escherichia coli M718]
 gi|331063292|gb|EGI35205.1| lysine--tRNA ligase [Escherichia coli TA271]
 gi|331073706|gb|EGI45027.1| lysine--tRNA ligase [Escherichia coli H591]
 gi|332102778|gb|EGJ06124.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|332752926|gb|EGJ83310.1| lysyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332753725|gb|EGJ84104.1| lysyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332754304|gb|EGJ84670.1| lysyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332765820|gb|EGJ96033.1| lysyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|332999678|gb|EGK19263.1| lysyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333000273|gb|EGK19856.1| lysyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333000724|gb|EGK20299.1| lysyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333015180|gb|EGK34523.1| lysyl-tRNA synthetase [Shigella flexneri K-304]
 gi|333015220|gb|EGK34562.1| lysyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 505

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|170682698|ref|YP_001745043.1| lysyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|170520416|gb|ACB18594.1| lysyl-tRNA synthetase LysS [Escherichia coli SMS-3-5]
          Length = 505

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|161870293|ref|YP_001599463.1| lysyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161595846|gb|ABX73506.1| lysyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 491

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 137 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 197 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 253 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASHTVNGTANITYNGKEVDLESPFE 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 313 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 368 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 425

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 426 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 485

Query: 346 PFSQSN 351
           P  +  
Sbjct: 486 PQMRPE 491


>gi|217965685|ref|YP_002351363.1| lysyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217334955|gb|ACK40749.1| lysyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307569767|emb|CAR82946.1| lysyl-tRNA synthetase [Listeria monocytogenes L99]
          Length = 498

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 162/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDSQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      ++     +      
Sbjct: 260 GTSTRHNPEFTMLESYAAYEDYEDVMNLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A   Y  +D      + +          A++  + V    T+  I +      +
Sbjct: 320 RIHMADAVKEYVGVDFWNVTSDEE------ARELAKKHDVPVTEHMTYGHILNEFFETHV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  
Sbjct: 432 RFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGVDRLVMLLTNAPSIRDILLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PTMKHR 497


>gi|188584759|ref|YP_001916304.1| lysyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349446|gb|ACB83716.1| lysyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 489

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 171/369 (46%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +  F E+++ 
Sbjct: 134 LRPLPEKWHGLKDVDLRYRKRYLDLIMNQDVKDTFVIRSKIIREMRRYLDDRGFFEMETP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L   PG   + R F T     + +   LY++ + E   K+L+  G +K++     +RN 
Sbjct: 194 TLHTIPGGA-NARPFKT---YHNALEMKLYMRIATELHLKRLIVGGFDKVYELGRIFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+++  Y  +M+   N+I   A       +  +Q  N +      
Sbjct: 250 GISTKHNPEFTSIELYQSNSDYHDMMELTENMIYEIANKIFGTPVVEYQGTNIDFTPPWP 309

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ +A      ID         + +      +A+QAGI V  D TW +  + I  EK+
Sbjct: 310 RKTMIDAVKEATGIDFS-------ELNHEKAREKAEQAGIEVEKDATWGEALNEIFEEKV 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA  +  D R T RFE +    E+ NA  EL DP +QR 
Sbjct: 363 EDS--LVQPTFILDYPVEVSPLAKRHEEDSRLTYRFEGFLWGSEIANAFTELNDPRDQRE 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++++     E + +DEDF+  L   MP + G+ +G DRLVM +T + +I +VI  
Sbjct: 421 RFESQVEKRDAGDEEAHMMDEDFVEALEYGMPPTGGLGIGIDRLVMFMTNSTSIRDVILF 480

Query: 346 PFSQSNQEE 354
           P  +  Q+E
Sbjct: 481 PTMRPKQDE 489


>gi|225375162|ref|ZP_03752383.1| hypothetical protein ROSEINA2194_00786 [Roseburia inulinivorans DSM
           16841]
 gi|225213036|gb|EEG95390.1| hypothetical protein ROSEINA2194_00786 [Roseburia inulinivorans DSM
           16841]
          Length = 664

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 166/365 (45%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ + SS+R Y     F+E+++ 
Sbjct: 157 LQILPEKYHGLTDTDARYRQRYVDLIMNEDVKDTFVKRSKVISSIRRYLDGQGFMEVETP 216

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G  +  R F T     + + + L L+ S E   K+L+  G E+++     +RN 
Sbjct: 217 MLVSNAGGAS-ARPFETHF---NALNEDLKLRISLELYLKRLIVGGMERVYEIGRVFRNE 272

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+     +I ++     +     E
Sbjct: 273 GLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRYIAKEVTGSEILTYGEHTMDLSKPFE 332

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YANID        + PD       A++  I         DI +    E +
Sbjct: 333 RITMVDAVKKYANIDFN------EVPDTAAAKKLAEEHHIEYEERHEKGDILNLFFEEYV 386

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L  + P DP + +RFE +    E+ NA  EL DP +QR 
Sbjct: 387 EEH--LIQPTFVMDHPIEISPLTKMKPEDPNYVERFEFFMNGWEMANAYSELNDPEDQRR 444

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +       E    DEDFL  L   MP + GI  G DR+VM++T +  I +V+  
Sbjct: 445 RFEAQEKAFAAGDEEANHTDEDFLNALAIGMPPTGGIGFGIDRMVMMMTNSPAIRDVLLF 504

Query: 346 PFSQS 350
           P  +S
Sbjct: 505 PTMKS 509


>gi|197117228|ref|YP_002137655.1| lysyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197086588|gb|ACH37859.1| lysyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 492

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 171/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR+ +   +R++  +N F+E+++ 
Sbjct: 137 LLPLPEKFHGLTDVETRYRQRYVDLIVSPDVREVFYKRSRVIQLIRDFMTKNDFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F+T     + +   L+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 197 MMHPIPGGAT-AKPFATH---HNALDMELFLRIAPELYLKRLVVGGFERVFEINRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ ++E LM     ++   A+       FS+     +      
Sbjct: 253 GISVRHNPEFTMMEFYQAYATFEDLMNYTEELLCHVAQELLGTLDFSYGGEPISFQRPWR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             TV EA   Y +ID  +        DR L Y  AQ+ G+ +  D  +  + + I  E  
Sbjct: 313 RFTVKEAILEYGDIDAKS------LEDRDLAYAYAQKIGLELPEDVGYGKLITEIFEEVA 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     DP +  RFE +    E+ NA  EL DP +Q+ 
Sbjct: 367 EIK--LIQPTFITNYPTEVSPLSRKSDQDPEYVDRFEFFCAGREMANAFSELNDPRDQKE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K K   E + +DED++  L   +P ++G  +G DRLVML+T + +I +VI  
Sbjct: 425 RFLAQVAAKDKGDEEAHYMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDSPSIRDVILF 484

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 485 PQLRKEAK 492


>gi|197285859|ref|YP_002151731.1| lysyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227356360|ref|ZP_03840748.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|238693207|sp|B4F0M6|SYK_PROMH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|194683346|emb|CAR44053.1| lysyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227163470|gb|EEI48391.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 504

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S++R++ V   F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQETRYRQRYLDLISNENSRNTFKIRSKIMSAIRQFMVNKGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMQTIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++    + R    +V    I  + +   +     E
Sbjct: 265 GVSPRHNPEFTMMELYMAYADYRDLIELTEELFRTLTQDVLGSTIVKYGDEEFDFGKPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       AQ  GI++        +   I  E  
Sbjct: 325 KLTMKEAICKY-----RPETNMADLDDMDKAVAIAQSIGIKIEKSWGLGRVQCEIFEEVA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 380 ESH--LIQPTFIIEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAQDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE+++++K+   +E    D D++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 438 RFEEQVRQKEAGDDEAMFFDHDYITALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 497

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 498 PAMRPGK 504


>gi|77918852|ref|YP_356667.1| lysyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|77544935|gb|ABA88497.1| lysyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 494

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 177/368 (48%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR+ I S +R + V+N F+E+++ 
Sbjct: 139 LQPLPEKWHGLTDVEMRYRQRYLDLIVNPDVQEIFKKRSQIVSLIRNFMVDNDFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G  T  R F T     + ++  L+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMQPVAGGAT-ARPFMTH---HNTLKMDLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ +YE LM     +I   A +V     F++     +  +  +
Sbjct: 255 GISIQHNPEFTMMEFYQAYANYEDLMDFTEKLICHVAEKVVGSLTFTYGGREVDLTAPWD 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV EA  +Y +++           D+      A+  G+       +  + + +  E  
Sbjct: 315 RLTVKEAILKYGDVEP------EVLEDKDQCLAYARSLGLDFDDTIGYGKLLTELFDEVA 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T + +YP   S L+     +P    RFEL+    EL NA  EL DPI+Q+ 
Sbjct: 369 EPK--LWNPTFITQYPTEVSPLSRKNEDNPEVVDRFELFVVGRELANAFSELNDPIDQKD 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K++ EK+   +E + +DED++  L   +P ++G  +G DRLVML+T A +I EVI  
Sbjct: 427 RFAKQLLEKEAGDDEAHAMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDAASIREVILF 486

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 487 PQLRPEAK 494


>gi|322381159|ref|ZP_08055162.1| lysyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154735|gb|EFX47006.1| lysyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 524

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 174/369 (47%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y     F+E+++ 
Sbjct: 168 LIPLPDKFHGLQDVELRYRQRYVDLIMNQDVQKTFILRSKIIQSMRCYLDSLGFLEVETP 227

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 228 TLHAIAGGAS-ARPFITH---HNALDMQLYMRIAIELHLKRLIVGGLEKVYEIGRVYRNE 283

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M+   ++I   A+ V       +Q    N      
Sbjct: 284 GVSTRHNPEFTMIELYEAYADYKDIMQLTEDLISHIAKEVLGSTTIEYQGKEVNLAGAWR 343

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA      +D    + + +       +  A++  + V  + T+  I ++     +
Sbjct: 344 RVSMVEAVREVTGVDFSVEMSDEE------AHRLAKEHNVPVEPNMTFGHIVNQFFETFV 397

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 398 EET--LIQPTFVYGHPVAISPLAKKNEEDPRFTDRFELFIVAREHANAFTELNDPIDQRE 455

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +DEDF+  L   +P + G+ +G DRL+ML+T A +I +V+  
Sbjct: 456 RFEAQLREREQGNDEAHMMDEDFIRALEYGLPPTGGLGIGVDRLIMLLTNAPSIRDVLLF 515

Query: 346 PFSQSNQEE 354
           P  +  Q E
Sbjct: 516 PTMRERQAE 524


>gi|319943697|ref|ZP_08017978.1| lysine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319742930|gb|EFV95336.1| lysine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 513

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   +++R++ V+N  +E+++ 
Sbjct: 158 LRPLPDKFHGLADQEMRYRQRYVDLMSNESTRQTFIIRSKAIAAIRQFMVDNGCLEVETP 217

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + + + ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 218 MLQPIPGGAT-ARPFQTH---HNALDQAMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 273

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+     +M     +IR AA+ A    +  +Q    +      
Sbjct: 274 GLSPRHNPEFTMMEFYAAYTDCRWMMDYTEQVIRHAAQAARGSTVLEYQGRPVDLSKPFA 333

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA   +A       L      D   L  +  + G+    +     +   +  E  
Sbjct: 334 RLTIVEAIRTHA-----PELPAEKLDDAAWLRAELAKHGVEPPANAGVGALQLALFEEVA 388

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     DP  T+RFEL+    E  N   EL DP +Q  
Sbjct: 389 ESK--LWDPTFIIDYPAEVSPLARSSDHDPEITERFELFMTGREFANGFSELNDPEDQAE 446

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++ K+   +E    D D++  L   MP + G+ +G DRL+ML+T +  I +VI  
Sbjct: 447 RFRKQVEAKEAGDDEAMYYDADYIRALEYGMPPTGGVGIGIDRLMMLLTDSPTIRDVILF 506

Query: 346 PFSQSNQ 352
           P  +  Q
Sbjct: 507 PALKREQ 513


>gi|225389818|ref|ZP_03759542.1| hypothetical protein CLOSTASPAR_03566 [Clostridium asparagiforme
           DSM 15981]
 gi|225044128|gb|EEG54374.1| hypothetical protein CLOSTASPAR_03566 [Clostridium asparagiforme
           DSM 15981]
          Length = 647

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 166/369 (44%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I +++R+Y     F+E+++ 
Sbjct: 140 LQVLPEKFHGLTDTDMRYRQRYVDLIMNAEVKDTFVKRSKIIAAIRKYLSSQNFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + L L+ S E   K+L+  G E+++     +RN 
Sbjct: 200 MLVSNAGGAA-ARPFETHF---NALDEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M+   N+ R  A+ V      +++ V  +     E
Sbjct: 256 GLDTRHNPEFTLMELYQAYTDYNGMMELTENLYRYVAQEVLGTTTITYKGVEMDLSKPFE 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D                   A++ G+         DI S    E  
Sbjct: 316 RITMVDAVKKYAGVDFDQI------KTLEEARAVAKEKGVEFEPRHKKGDILSLFFEEFA 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P F +RFE +    E+ NA  E+ DPI+QR 
Sbjct: 370 EEH--LIQPTFVLDHPVEISPLTKKKPGNPDFVERFEFFMNGWEMANAYSEINDPIDQRE 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +   +   E    DEDFL  L   MP + GI  G DR+VML+T +  I +V+  
Sbjct: 428 RFRAQEELLAQGDEEANHTDEDFLNALEIGMPPTGGIGYGIDRMVMLLTDSAAIRDVLLF 487

Query: 346 PFSQSNQEE 354
           P  +  +++
Sbjct: 488 PTMKPLEQK 496


>gi|290894520|ref|ZP_06557472.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290555921|gb|EFD89483.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 498

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 162/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDSQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      ++     +      
Sbjct: 260 GTSTRHNPEFTMLESYAAYEDYEDVMNLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A   Y  +D      + +          A++  + V    T+  I +      +
Sbjct: 320 RIHMADAVKEYVGVDFWNVTSDEE------ARELAKKHDVPVTEHMTYGHILNEFFETHV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  
Sbjct: 432 RFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGVDRLVMLLTNAPSIRDILLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PTMKHR 497


>gi|189423826|ref|YP_001951003.1| lysyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189420085|gb|ACD94483.1| lysyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 492

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 170/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I + +R +     F+E+++ 
Sbjct: 137 LLPLPEKFHGLTDVETRYRQRYVDLIVNPEVRELFIKRSRIVNLIRSFMTSRDFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 197 MMHQIPGGAT-ARPFVTH---HNALDMELYLRIAPELYLKRLVVGGFERVFEINRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ ++E LM     +    A +V     FS+Q +  +      
Sbjct: 253 GISVRHNPEFTMMEFYQAYATFEDLMDFTEELFCHVAEQVLGTLGFSYQGLAISFQRPWR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV EA   Y +ID           DR L    A+  G+ +  D ++  +   I  E  
Sbjct: 313 RLTVKEAILEYGDIDAKK------LDDRDLALAYARSIGLDLPDDISYGKLVMEIFEEVA 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     DP    RFEL     E+ NA  EL DP++Q+ 
Sbjct: 367 EHK--LIQPTFVTAYPTEVSPLSRKNDLDPYIVDRFELMIGGREIANAFSELNDPVDQKE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK K   E + +DED++  L   +P ++G  +G DRLVML+T + +I +VI  
Sbjct: 425 RFLAQVAEKDKGDEEAHYMDEDYVRALEYGLPPTAGEGIGIDRLVMLLTDSASIRDVILF 484

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 485 PQLRKEAK 492


>gi|218768429|ref|YP_002342941.1| lysyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|32130176|sp|Q9JTT7|SYK_NEIMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|121052437|emb|CAM08773.1| lysyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|319410675|emb|CBY91052.1| lysyl-tRNA synthetase (lysine-tRNA ligase; LysRS) [Neisseria
           meningitidis WUE 2594]
          Length = 503

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASHTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|251790992|ref|YP_003005713.1| lysyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247539613|gb|ACT08234.1| lysyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 505

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFRVRSQILAGIRQFMVGRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       + +   +     E
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTTEVPYGDQVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D          A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETNLADLDSFDAAKAIAESIGIKVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|292900473|ref|YP_003539842.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291200321|emb|CBJ47449.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|312171252|emb|CBX79511.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 506

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 163/368 (44%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R + V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDDSRNTFKVRSQIMAGIRNFMVGRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MMQAIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  YE L++   ++ R  A+ V    +  + +   +      
Sbjct: 266 GISPRHNPEFTMMELYMAYADYEDLIELTESLFRTLAQNVLGSTLVPYGDQQFDFGQPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       AQ  GI V        + + I  E  
Sbjct: 326 KLTMKEAILKY-----RPQTDLADLADFDKSVAIAQSLGINVEKSWGLGRVVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     DP  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EEH--LIQPTFITEYPAEVSPLARRNDVDPEITDRFEFFIGGREIGNGFSELNDAQDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 499 PALRPGSK 506


>gi|226945981|ref|YP_002801054.1| lysyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|226720908|gb|ACO80079.1| lysyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 500

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ I + +R +  E  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFRVRSQIIAHIRRFLAERDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +  P++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 205 MLQVIPGGAA-AKPFQTH---HNALDLPMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       +Q    +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEQLFRELAQLVLGTTDVPYQGKVFHFGEPFA 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++   Y        +   D  D       A++AG  V   +    + + I  E +
Sbjct: 321 RLSVFDSILYY-----NPEVSAADLRDIEKCRAIARKAGADVKGFEGLGKLQTMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T + RYP   S LA     DP  T RFEL+    E+ NA  EL D  +Q  
Sbjct: 376 EHR--LEQPTFITRYPFEVSPLARRSDDDPSVTDRFELFIGGREIANAYSELNDAEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++K    +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFMQQVRDKDAGDDEAMHFDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPE 499


>gi|294788454|ref|ZP_06753697.1| lysine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483885|gb|EFG31569.1| lysine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 504

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 161/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V  +++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANAESRETFIKRSQIIQSVRNFMVGEKYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHSIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA--NQKIFSFQNVNCNPFSEP 165
                H PEFTM+E+Y A   Y ++M+   +IIR A +          +     +  S  
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYNRMMQMAEDIIRNACKTVNSGSLKIEYNGKEVDLESPF 324

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E +T+ +A  +Y          +    D   L  +  + G  + H      +   +    
Sbjct: 325 ERLTILQAIKKY-----NPQYTDEQLNDAEWLKKEIVKHGESLPHASGLGSLQLALFEGC 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q 
Sbjct: 380 AESK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQA 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T A  I +VI 
Sbjct: 438 ARFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTNAQTIRDVIL 497

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 498 FPQMRPE 504


>gi|220905826|ref|YP_002481137.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219862437|gb|ACL42776.1| lysyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 509

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R +I +++R Y  +  FIEI++ 
Sbjct: 154 LLPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRETFRRRALITAAIRRYLDQQDFIEIETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   +YL+ + E   K+L+  G EK+F     +RN 
Sbjct: 214 VLQLEAGGA-EARPFIT---YHNTLEMQMYLRIATELHLKRLIVGGFEKVFELGRVFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M    N+I  AAE         +Q    +     +
Sbjct: 270 GISTRHNPEFTTIEIYQAYADYQDMMALTENLIVTAAETVLGTLKIDYQGTEIDLTPPWQ 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI-RVAHDDTWSDIFSRILIEK 225
            IT+ E   +   +D                   A QAGI  +   D+   + +    +K
Sbjct: 330 RITMWEVVQQKTGLDFSQF------TTLDEAKAAADQAGIVDLEKCDSIGKVLNEAFEQK 383

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  + + P   +RFEL+    E  N+  EL DPI+QR
Sbjct: 384 VEAT--LMQPTFVLDYPVEISPLAKPHRSQPGLVERFELFIVGRETANSFSELTDPIDQR 441

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E + + K     E + +DEDFL  L   MP + G+ +G DRLVML+T A +I +VI 
Sbjct: 442 QRLELQAERKAAGDLEAHSVDEDFLTALEHGMPPTGGLGIGIDRLVMLLTNAASIRDVIA 501

Query: 345 TPFSQSNQ 352
            P  ++ +
Sbjct: 502 FPVLKAEK 509


>gi|315022849|gb|EFT35873.1| lysyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
          Length = 565

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 101/377 (26%), Positives = 170/377 (45%), Gaps = 36/377 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  + +++R +F + 
Sbjct: 136 LRPLPQPRTDENGVVHDAFNDPELRYRQRYVDLTVNPHVKEIFVKRTKLFNAMRGFFNDA 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            + E+++  LQ  PG  +  R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 196 GYFEVETPILQAIPGGAS-ARPFITH---HNALDIPLYMRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M     ++   A   N K  S F    
Sbjct: 252 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTERLLEHCATAVNGKPESQFGEHT 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N  +    I++ +A  ++   D+              L   A+  GI V        + 
Sbjct: 312 INWKAPYPRISMTDAIRKFTGFDITG-------KTEEELRTFAKSIGIEVDDTMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   + +    T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGEKCEGN--FIQPTFITDYPIEMSPLTKKHRSKEGLTERFELMVCGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE++++  +K  +E   ID+DFL  L   MP ++G+ +G DRLVM +T   
Sbjct: 423 NDPIDQRERFEEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGMDRLVMFLTNNA 482

Query: 338 NINEVIWTPFSQSNQEE 354
           +I EV++ P  +  + +
Sbjct: 483 SIQEVLFFPQMRPEKAQ 499


>gi|152971836|ref|YP_001336945.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|150956685|gb|ABR78715.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 505

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKVRSQILAGIRQFMVGRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +      ++ +   +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGNTEVTYGDQVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  +       A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETEMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVDAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|256544718|ref|ZP_05472090.1| lysine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256399607|gb|EEU13212.1| lysine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 637

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 87/365 (23%), Positives = 161/365 (44%), Gaps = 29/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              + R+ I S +R++     F+E+++ 
Sbjct: 136 LQILPEKWHGLKDPDIRYRQRYVDLIVNPEVKDVFVLRSKIISEIRKFLENRGFLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     + +   +YL+ + E   K+L+  G +K++     +RN 
Sbjct: 196 ILNTIAGGAS-ARPFITH---HNSLDIGMYLRIASELYLKRLIVGGFDKVYEIGRMFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +E +M+    ++   A       +  F        +  +
Sbjct: 252 GMDATHNPEFTTMELYQAYGDFEDMMEITETMVEEVANKVKGTTLVEFDGKEIELKTPWK 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ +A   Y+ +D     +  D          A++  I V    T  +I +    E +
Sbjct: 312 RISMIDAVKEYSGVDFNEITEYED------AVKIAKEKNIEVKS--TRGEIIAEFFDEFV 363

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     D   T RFE +    E+ NA  EL D ++Q+ 
Sbjct: 364 EDK--LIQPTFVIDYPVEISPLAKRKNDDESLTYRFEAFVNGAEIANAFSELNDAVDQKQ 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +++   +E + +D DF+  L   MP + G+ +G DRL+M++TG  +I +V+  
Sbjct: 422 RFLDQVAKREAGDDEAHMMDYDFVNALEVGMPPTGGLGIGIDRLIMILTGQRSIRDVLLF 481

Query: 346 PFSQS 350
           P  + 
Sbjct: 482 PTMKP 486


>gi|27469184|ref|NP_765821.1| lysyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866087|ref|YP_187752.1| lysyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242241602|ref|ZP_04796047.1| lysyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|251809824|ref|ZP_04824297.1| lysyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875448|ref|ZP_06284320.1| lysine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366159|ref|ZP_06612846.1| lysine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258353|sp|Q8CQV5|SYK_STAES RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71153566|sp|Q5HRN7|SYK_STAEQ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|27316733|gb|AAO05908.1|AE016751_203 lysyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57636745|gb|AAW53533.1| lysyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242234983|gb|EES37294.1| lysyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|251806692|gb|EES59349.1| lysyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295805|gb|EFA88327.1| lysine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319753|gb|EFE60112.1| lysine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329723930|gb|EGG60455.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU144]
 gi|329733011|gb|EGG69350.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|329737885|gb|EGG74113.1| lysine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 495

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 166/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +  F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTQTFINRSKIIQEMRNYLNKQGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    N++R  A+         + +   +  S  +
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTENMVRHIAQEVFGSAKVQYNDEEIDLESSWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D      +            A++  I +  +  +  I +    +K+
Sbjct: 318 RLHIVDAVKEVTGVDFYNVNSD------EEAIRLAKEHDIEITENMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EET--LIQPTFIYGHPIEISPLAKKNPNDERFTDRFELFIVGREHANAFTELNDPIDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK++  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKEQGNDEAHDMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|271499214|ref|YP_003332239.1| lysyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270342769|gb|ACZ75534.1| lysyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 505

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFRVRSQILAGIRQFMVGRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       + +   +     E
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTTEVPYGDQVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D          A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETNLADLDSFDAAKAIAESIGIKVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|33862420|ref|NP_893980.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|39932063|sp|Q7U3A4|SYK_PROMM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33640533|emb|CAE20322.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 508

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 91/367 (24%), Positives = 159/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R ++ S++R +  +  F+EI++ 
Sbjct: 151 LQPLPDKWHGLADVEKRYRQRYLDLIVSPQSRETFRRRALMVSAIRRWLDDRAFLEIETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+L+  G E+++     +RN 
Sbjct: 211 VLQAEAGGA-EARPFITH---HNTLDLPLYLRIATELHLKRLVVGGFERVYELGRIFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +I     ++      ++Q +  +      
Sbjct: 267 GMSTRHNPEFTSVEVYQAYADYIDMMVLTEQLISSVCTQICGSTRITYQGIEIDLTPPWR 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
             ++ E       +D           D  +      + G+ V    D+   + +    + 
Sbjct: 327 RASMHELVQEATGLD------FMGFKDLAVAASAMARVGLEVPSKADSVGRLLNEAFEQA 380

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E  + +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL+DP++QR
Sbjct: 381 VE--VSLIQPTFVLDYPIEISPLARQHRSKPGLVERFELFIVGRETANAFSELIDPLDQR 438

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   ++    E + +DEDFL  L   MP + G+ +G DRLVML T + +I +VI 
Sbjct: 439 QRLEAQQARRQAGDLEAHGVDEDFLQALEVGMPPTGGLGIGIDRLVMLFTDSPSIRDVIA 498

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 499 FPLLRPE 505


>gi|120437254|ref|YP_862940.1| lysyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|254782473|sp|A0M5H8|SYK_GRAFK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|117579404|emb|CAL67873.1| lysyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 569

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 100/378 (26%), Positives = 170/378 (44%), Gaps = 36/378 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  + +++R +F E 
Sbjct: 143 LRPLPLPKTDKEGNTHDGFNDPEQRYRQRYADLAVNPKVKEIFVKRTKLFNAMRNFFNER 202

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
           ++ E+++  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 203 EYFEVETPILQSIPGGAA-ARPFVTH---HNALDIPLYLRIANELYLKRLIVGGFDGVYE 258

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M+    ++   AE        +F    
Sbjct: 259 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMEFTEQLLEHCAEAVNGTTDATFGEHK 318

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N  +  + +++ +A   Y   D+              LY  A+   I V        + 
Sbjct: 319 INFKAPYKRLSMTDAIIEYTGFDITG-------KSEKELYEAAKGMDIEVDDTMGKGKLI 371

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E        T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 372 DEIFGEKCEGK--FIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSEL 429

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP++QR RFE++++  +K  +E   ID DFL  L   MP +SG+ +G DRL+M +T   
Sbjct: 430 NDPLDQRERFEEQLKLSEKGDDEAMFIDNDFLRSLEYGMPPTSGLGIGMDRLIMFLTNKQ 489

Query: 338 NINEVIWTPFSQSNQEEI 355
           +I EV++ P  +  ++ +
Sbjct: 490 SIQEVLFFPQMKPEKKAV 507


>gi|300778809|ref|ZP_07088667.1| lysine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300504319|gb|EFK35459.1| lysine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 565

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 99/375 (26%), Positives = 165/375 (44%), Gaps = 36/375 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  + +++R +F + 
Sbjct: 136 LRPLPQAKTDEYGVVHDGFTDPELRYRQRYVDLTVNPQVKEIFVKRTKLFNAMRTFFNDA 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            + E+++  LQ  PG     + F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 196 GYFEVETPILQSIPGGAA-AKPFITH---HNALDIPLYLRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M     ++   A   N     +F    
Sbjct: 252 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTEKLLEFCAIQVNGTTKATFGEHE 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    +++ EA  ++   D+              LY  A+  GI V        + 
Sbjct: 312 VDFKAPYPRVSMTEAILKFTGFDITG-------KTEQELYDFAKSIGIEVNETMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +      T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGEKCEGN--FIQPTFITDYPIEMSPLTKKHRNKEGLTERFELMVCGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE +M   ++  +E   ID+DFL  L   MP +SG+ +G DRL+M +T   
Sbjct: 423 NDPIDQRERFEAQMALSERGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNA 482

Query: 338 NINEVIWTPFSQSNQ 352
           +I EV++ P  +  +
Sbjct: 483 SIQEVLFFPQMRPEK 497


>gi|50119719|ref|YP_048886.1| lysyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81646128|sp|Q6D945|SYK_ERWCT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|49610245|emb|CAG73688.1| lysyl tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 505

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + +++R + V+N F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDDSRNTFRIRSNVMAAIRRFMVDNGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+    N+ R    +V       + +   +     +
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTENLFRTLTQDVLGSTTVVYGDQTFDFGKPFD 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A   GI++        I + I  E  
Sbjct: 326 KLTMREAICKY-----RPETNVADLDDLEKATAIALSLGIKIEKSWGLGRIVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESS--LIQPTFITEYPAEVSPLARRNDQNSEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFAQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|302380263|ref|ZP_07268735.1| lysine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312046|gb|EFK94055.1| lysine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 630

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 165/365 (45%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I S++RE+     F+E+D+ 
Sbjct: 133 LQILPEKWHGLKDPDLRYRQRYVDLIMNPEIKDTFVKRSRIISAIREFLDTRGFLEVDTP 192

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   +YL+ + E   K+L+  G +K++     +RN 
Sbjct: 193 ILNTIAGGA-NARPFITH---HNTLDIDMYLRIANELYLKRLIVGGFDKVYEMGRMFRNE 248

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPE 166
                H PE+T +E Y+A+  Y  +M     ++    E  N  + S F     +     +
Sbjct: 249 GMDHTHNPEYTAIELYQAYADYNDMMDITEQLVAFVCEKVNGSMKSQFGETEIDFTPPWK 308

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   YA+I+        +          A+   + +  + +  ++ +       
Sbjct: 309 RITMVDAIKEYADINFD------EIETDEQAREVAKANNVDIKDNMSRGEVINECFEHFC 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D R+T RFE + C  E+ NA  EL +PI+Q+ 
Sbjct: 363 EEK--LVQPTFVLGHPVEVSPLAKRNPDDERYTHRFEAFVCTKEIANAFSELNNPIDQKE 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++ ++   +E   +D DFL  L   +P + G+ +G DRL+M++T   +I +++  
Sbjct: 421 RFLKQVEARENGDDEAQMMDYDFLNALEVGLPPTGGLGIGVDRLIMMLTNNESIRDIMLF 480

Query: 346 PFSQS 350
           P  + 
Sbjct: 481 PTMKP 485


>gi|308389530|gb|ADO31850.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 503

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|198275661|ref|ZP_03208192.1| hypothetical protein BACPLE_01833 [Bacteroides plebeius DSM 17135]
 gi|198271290|gb|EDY95560.1| hypothetical protein BACPLE_01833 [Bacteroides plebeius DSM 17135]
          Length = 575

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 169/374 (45%), Gaps = 35/374 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKRN + +S+REYF    
Sbjct: 142 IRPLPIVKYKDGVAYDKFEDPELRYRQRYVDLVVNDGVKEIFLKRNKVYNSMREYFNSKG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           +IE+++  LQ   G     R F T     + +  PLY++ + E   K+L+  G E ++  
Sbjct: 202 YIEVETPILQSIAGGAA-ARPFITH---HNALDIPLYMRIASELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNC 159
              +RN      H PEFT +E Y A++ Y  +MK   N+I     +V         +   
Sbjct: 258 GKNFRNEGMDRTHNPEFTCMEIYVAYKDYNWMMKFTENMIEKICLDVNGTTEVQVGDNVI 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           N  +  + +T+ ++   +   DL          +   +    ++  + +        +  
Sbjct: 318 NFKAPFKRVTMLDSIKEFTGYDLTGM-------NEEQIREVCKKLNMEIDDTMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E N      T +  YP   S L   + ++P  T+RFEL     ELCNA  EL 
Sbjct: 371 EIFGEFCEGNY--IQPTFITDYPIEMSPLTKKHRSNPDLTERFELMVNGKELCNAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RFE++M+  +K  +E   ID+DF+  L   MP +SG+ +G DRLVML+TG + 
Sbjct: 429 DPIDQLERFEEQMRLSEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLVMLMTGQST 488

Query: 339 INEVIWTPFSQSNQ 352
           I EV++ P  +  +
Sbjct: 489 IQEVLFFPQMRPEK 502


>gi|110644488|ref|YP_672218.1| lysyl-tRNA synthetase [Escherichia coli 536]
 gi|191173390|ref|ZP_03034919.1| lysyl-tRNA synthetase LysU [Escherichia coli F11]
 gi|218692425|ref|YP_002400637.1| lysyl-tRNA synthetase [Escherichia coli ED1a]
 gi|300995361|ref|ZP_07181057.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|306815736|ref|ZP_07449885.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|331681066|ref|ZP_08381703.1| lysine--tRNA ligase [Escherichia coli H299]
 gi|110346080|gb|ABG72317.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536]
 gi|190906366|gb|EDV65976.1| lysyl-tRNA synthetase LysU [Escherichia coli F11]
 gi|218429989|emb|CAR10822.1| lysine tRNA synthetase, inducible [Escherichia coli ED1a]
 gi|222035857|emb|CAP78602.1| Lysyl-tRNA synthetase, heat inducible [Escherichia coli LF82]
 gi|300304862|gb|EFJ59382.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|305851398|gb|EFM51853.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|312948724|gb|ADR29551.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|324015778|gb|EGB84997.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|331081287|gb|EGI52448.1| lysine--tRNA ligase [Escherichia coli H299]
          Length = 505

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPLK 505


>gi|172038375|ref|YP_001804876.1| lysyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171699829|gb|ACB52810.1| lysyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 573

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 164/366 (44%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +S+R Y  +  FIEI++ 
Sbjct: 156 LLPLPDKWHGLTDTEKRYRQRYVDLIVNPQVRQTFRRRAEITASIRRYLDKQGFIEIETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 216 VLQSEAGGA-EARPFIT---YHNTLEMDLYLRIATELHLKRLIVGGFEKVFELGRIFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M+    II  AAE V      ++Q  + +  +   
Sbjct: 272 GVSTKHNPEFTSIEVYQAYADYNDMMELTEAIITTAAEEVLGTLKITYQGEDIDLSTPWR 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            +T+ +     + +D           D        ++ G+ V         + + +  + 
Sbjct: 332 RVTMHDIVKEKSGLDF------EQFKDFETAKNAVKEVGLDVPETCQSLGKLINEVFEQT 385

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA  +       +RFELY    EL N+  EL DPI+QR
Sbjct: 386 VEET--LIQPTFILDFPVEISPLAKPHRNKEGLVERFELYIVGRELANSFSELTDPIDQR 443

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +R EK+ ++K     E + +DEDFL  L   MP + G+ +G DRL+ML+T + +I +VI 
Sbjct: 444 NRLEKQAEQKAAGDLEAHSVDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIA 503

Query: 345 TPFSQS 350
            P  ++
Sbjct: 504 FPLLKN 509


>gi|261492266|ref|ZP_05988829.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494487|ref|ZP_05990973.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261309871|gb|EEY11088.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261312045|gb|EEY13185.1| lysine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 500

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 161/364 (44%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R++F+E  FIE+++ 
Sbjct: 146 LRPLPDKHHGLTDLETRYRQRYLDLISNEESRRTFMIRSQVVSGIRKFFLERDFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-AKPFITH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++       + +   +     E
Sbjct: 262 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRQLALDILGTTDVPYGDYVFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y N      +   D          A+  GI +        + + I  E  
Sbjct: 322 RITMHDAIVKYGN-----GIQREDLDSFEKSVEIAKGLGIEIQKSWGLGSVVNAIFEEVA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 377 EHQ--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DEDF+  L   +P ++G  +G DRL M+   A +I +VI  
Sbjct: 435 RFDAQVAAKDAGDDEAMFKDEDFIVALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PAMR 498


>gi|148241213|ref|YP_001226370.1| lysyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166230597|sp|A5GQ58|SYK_SYNR3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|147849523|emb|CAK27017.1| Lysyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 502

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 153/367 (41%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  + S +R +  E  F+EI++ 
Sbjct: 134 LQPLPDKWHGLADVEKRYRQRYLDLIVSPDTRDTFRRRAQLVSGIRRWLDERDFLEIETP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +  PL L+ + E   K+L+  G E+++     +RN 
Sbjct: 194 VLQSEPGGA-DARPFETH---HNALDLPLTLRIATELHLKRLVVGGFERVYELGRIFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A   Y  +M     +I     +V    + ++Q    N      
Sbjct: 250 GVSTRHNPEFTSVEIYQAFADYNDMMDLTEELISSVTQQVCGSTLINYQGTEINLAPGWR 309

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEK 225
             T+ E       +D        D           +  G++     D+   + +    + 
Sbjct: 310 RATMHELVKEATGLDFAGFSSREDAA------AAMEAKGLQTPALADSVGRLLNEAFEQA 363

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL DP++QR
Sbjct: 364 VEET--LIQPTFVTDYPVEISPLARSHRSKPGLVERFELFIVGREHGNAFSELTDPVDQR 421

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E + + +     E   +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 422 QRLEAQQERRAAGDLEAQRVDEDFLNALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 481

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 482 FPLLKPE 488


>gi|15602054|ref|NP_245126.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|13431878|sp|P57822|SYK_PASMU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|12720410|gb|AAK02273.1| LysU [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 501

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 100/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 145 LRPLPDKFHGLSDQETRYRQRYLDLIANEDSRRTFIIRSKVIAGIREYFLSKGFMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 205 MLQIIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A  +    I  +  +  +     E
Sbjct: 261 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAMDILGTTIVPYGELEFDFGKPFE 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        + + I  E  
Sbjct: 321 RITMHDAILKYG---AEKGIVKEDLYDFDRAVAVAKKLGIEVQKSWGLGSLVNVIFEEVA 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 378 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 436 RFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPTAGEGLGIDRLAMLFANAASIRDVILF 495

Query: 346 PFSQ 349
           P  +
Sbjct: 496 PAMK 499


>gi|210623237|ref|ZP_03293676.1| hypothetical protein CLOHIR_01626 [Clostridium hiranonis DSM 13275]
 gi|210153774|gb|EEA84780.1| hypothetical protein CLOHIR_01626 [Clostridium hiranonis DSM 13275]
          Length = 508

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 169/369 (45%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R     +LR Y  E  F+E+++ 
Sbjct: 147 LQILPEKYHGLKDQELRYRQRYVDLIVNPEVKDAFITRTKALKALRSYLDERGFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +  P+YL+ + E   K+L+  G +K++     +RN 
Sbjct: 207 ILNTIAGGA-NARPFITH---HNTLHIPMYLRIANELYLKRLIVGGFDKVYEMGRMFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PE+T +E Y+A+  +  +M+   N+I   AEVA       +Q    +     +
Sbjct: 263 GMDMKHNPEYTAIELYQAYADFTDMMEIAENLIAHMAEVATGSTKVVYQGKEIDFKPPWK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E    Y+ +D      + +          A++ GI V       +I +    E  
Sbjct: 323 RMTMIECVKEYSGVDFNEINTDEE------AIAIAKEKGIEVKPGMRRGEIIAEFFEEFG 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L+     DPR T RFE +A   EL NA  EL DPI+Q+ 
Sbjct: 377 EDK--LVQPTFITHHPVEISPLSKRNNEDPRLTDRFEAFANGWELANAFSELNDPIDQKG 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++++K+   +E   +DEDFL  L   +P + G+ +G DR++ML+T + +I +V+  
Sbjct: 435 RFMDQLRKKELGDDEACDMDEDFLNALEVGLPPTGGLGIGIDRVIMLLTDSTSIRDVLLF 494

Query: 346 PFSQSNQEE 354
           P  +  +++
Sbjct: 495 PTMKPIEKQ 503


>gi|261212225|ref|ZP_05926511.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC341]
 gi|260838833|gb|EEX65484.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC341]
          Length = 510

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 167/368 (45%), Gaps = 22/368 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNESSRNAFVVRSKVMSAIRNFMISKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +         +  
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGKYA 324

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y  N      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 325 RMSMVEAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T ++ I +VI 
Sbjct: 443 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNSHTIRDVIL 502

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 503 FPAMRPQQ 510


>gi|194099248|ref|YP_002002342.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|238690219|sp|B4RP57|SYK_NEIG2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193934538|gb|ACF30362.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 503

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T    I +VI  
Sbjct: 438 RFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDLQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|110640530|ref|YP_668258.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536]
 gi|191171296|ref|ZP_03032846.1| lysyl-tRNA synthetase [Escherichia coli F11]
 gi|300988985|ref|ZP_07178881.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|28316248|emb|CAD66193.1| putative lysil-tRNA synthetase LysU [Escherichia coli]
 gi|110342122|gb|ABG68359.1| lysyl-tRNA synthetase, heat inducible [Escherichia coli 536]
 gi|190908596|gb|EDV68185.1| lysyl-tRNA synthetase [Escherichia coli F11]
 gi|300305805|gb|EFJ60325.1| lysyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|324010339|gb|EGB79558.1| lysyl-tRNA synthetase [Escherichia coli MS 60-1]
          Length = 498

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 171/367 (46%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R Y  E+ F+E+++ 
Sbjct: 143 LRPLPDKFHGLLDQELRYRQRYVDLIVNHDTYRTFETRSRILTEIRRYMAEHDFMEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + + + ++L+ SPE   K+L+  G E++F     +RN 
Sbjct: 203 MMQSIPGGAS-ARPFITH---HNALDQDMFLRISPELYLKRLVVGGFERVFEINRNFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  +  L+    ++ R  A+ V    +  + +   +      
Sbjct: 259 GISPRHNPEFTMMELYIAYADFHDLINFTEDLFRTVAQNVLGTTLIEYGDELFDFGKPFN 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E+  +Y N      +   D  D     L A++ GI V        + S I  E +
Sbjct: 319 KLTMRESIIKYGN-----GITLTDIDDIQSASLTARKLGITVEPSWGVGRLQSEIFEEVV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P +T RFE +    E+ N   EL D  +Q  
Sbjct: 374 EQH--LIQPTFITEYPAEISPLARRNDKNPLYTDRFEFFIGKREIGNGFSELNDAEDQAE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+++++ K+    E    DED++  L   MP ++G+ +G DR++ML T  + I +VI  
Sbjct: 432 RFKEQVKAKEAGDEEAMYYDEDYVTALEYGMPPTAGLGIGIDRMIMLFTNCHTIRDVIMF 491

Query: 346 PFSQSNQ 352
           P  ++++
Sbjct: 492 PAMRTSK 498


>gi|225024787|ref|ZP_03713979.1| hypothetical protein EIKCOROL_01674 [Eikenella corrodens ATCC
           23834]
 gi|224942494|gb|EEG23703.1| hypothetical protein EIKCOROL_01674 [Eikenella corrodens ATCC
           23834]
          Length = 506

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 89/369 (24%), Positives = 156/369 (42%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR  I  ++R +    Q++E+++ 
Sbjct: 148 LRPLPDKVHGLKDQETRYRQRYADLIVNAESREIFKKRGRIIQTIRNFMTGEQYLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +  PL+++ +PE   K+L+  G E++F     +RN 
Sbjct: 208 MMHPIAGGAA-ARPFVTH---HNALDIPLFMRIAPELYLKRLVVGGFERVFEINRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   Y ++M     +IR  A          +     +     +
Sbjct: 264 GVSARHNPEFTMMEFYEAFSDYHRMMDMTEGVIRACANAVCGSLHVPYNGKEVDLEKRFD 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 324 RLTIVDAIKKY-----NPHYTDEQLNDEEWLKKEVVKHGEDLPAAPGIGSLQLALFEGCA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P+ T+RFEL+A   EL N   EL DP +Q  
Sbjct: 379 EGK--LWNPTFIIDYPVEVSPLARASDTNPKLTERFELFAVGRELANGYSELNDPEDQAD 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +K+   +E    D D++  +   +P + G  +G DRLVML+T A +I +VI  
Sbjct: 437 RFRSQVAQKEAGDDEAMNYDADYIRAMEYGLPPTGGCGIGIDRLVMLLTNAPSIRDVILF 496

Query: 346 PFSQSNQEE 354
           P  +  + +
Sbjct: 497 PHMRPEEGQ 505


>gi|15837714|ref|NP_298402.1| lysyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|11387145|sp|Q9PEB6|SYK_XYLFA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|9106069|gb|AAF83922.1|AE003947_2 lysyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 506

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 163/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  +LR +     F+E+++ 
Sbjct: 151 LRPLPDKWHGLTDVEQRYRQRYVDLIVTPESREIFIKRSKIIRALRTWLDARLFLEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG     + F T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 211 MMHYIPGGAA-AKPFVT---YHNALDLELYLRVAPELYLKRLVVGGLERVYEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y ++M     +IR  A+ V       +     +      
Sbjct: 267 GVSTRHNPEFTMLELYEAYSTYHEVMDLAETMIRDTAQSVLGTTQVIWDGAQIDLGPIFR 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   +  DR  L L  ++  I+V     W  +   I    +
Sbjct: 327 RWRMDEAVCHH-----NPEISVAECTDRDALLLHCERLKIKVKSSYGWGRLLLSIFEATV 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    E+ N   EL DP EQ  
Sbjct: 382 EHT--LIQPTFITDHPVEISPLARESDIEPGYTDRFELFINGKEIANGFSELNDPEEQAM 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+K+++ K+   +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 440 RFQKQVEAKEGGDDEAMYYDADYIRALEYGMAPTGGLGIGVDRLVMLLTGSTSIRDVLLF 499

Query: 346 PFSQSNQ 352
           P+ +  +
Sbjct: 500 PYMRPER 506


>gi|45657773|ref|YP_001859.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|59798559|sp|Q72R38|SYK_LEPIC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|45601013|gb|AAS70496.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 495

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 89/373 (23%), Positives = 160/373 (42%), Gaps = 34/373 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR R              + R+ I S +R +  +  
Sbjct: 135 IRPLPVVKEKDGVVYDAFADVEQRYRMRYVDLIVNDHVRDTFITRSKIVSEIRSFLTQEG 194

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           F+E+++  +Q   G     R F T     + +   L+L+ +PE   K+L+  G +++F  
Sbjct: 195 FLEVETPMMQPIAGGAA-ARPFVTH---HNTLDMQLFLRIAPELYLKRLIVGGMDRVFEL 250

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNC 159
              +RN      H PEFTM+E Y A      ++     +I   A+ +       +     
Sbjct: 251 NRNFRNEGISTKHNPEFTMMEAYMAFGDMSTMLDLTERLITHLAQKICGTLKIQYGKDLI 310

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     +  T  +    Y+ ID    +             +A +  + V+   T   +  
Sbjct: 311 DLSPPWKRTTYVDIIKEYSGIDFSQIIS------LEEAKKKASELKVDVSKCQTIWKVAD 364

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            +  EK EPN  +     +  YP   S LA   P  P + +RFE Y    E+ NA  EL 
Sbjct: 365 EVFSEKAEPN--LIQPIFITDYPKELSPLAKSNPDKPGYVERFEPYVAGREIGNAFTELN 422

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +Q+ RFE ++++++   +E + +DED++  L   MP + G+ +G DRLVML+T +++
Sbjct: 423 DPFDQKERFEDQVKQREAGDDEAFMMDEDYIRALEYGMPPTGGLGIGIDRLVMLLTNSHS 482

Query: 339 INEVIWTPFSQSN 351
           I + I  P  +  
Sbjct: 483 IRDTILFPLMRPE 495


>gi|313205755|ref|YP_004044932.1| lysyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445071|gb|ADQ81426.1| lysyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|325336803|gb|ADZ13077.1| Lysyl-tRNA synthetase (class II) [Riemerella anatipestifer RA-GD]
          Length = 566

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 101/377 (26%), Positives = 170/377 (45%), Gaps = 36/377 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  + +++R +F + 
Sbjct: 137 LRPLPQPRTDENGVVHDAFNDPELRYRQRYVDLTVNPHVKEIFVKRTKLFNAMRGFFNDA 196

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            + E+++  LQ  PG  +  R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 197 GYFEVETPILQAIPGGAS-ARPFITH---HNALDIPLYMRIANELYLKRLIVGGFDGVYE 252

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M     ++   A   N K  S F    
Sbjct: 253 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTERLLEHCATAVNGKPESQFGEHT 312

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N  +    I++ +A  ++   D+              L   A+  GI V        + 
Sbjct: 313 INWKAPYPRISMTDAIRKFTGFDITG-------KTEEELRTFAKSIGIEVDDTMGKGKLI 365

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   + +    T+RFEL  C  E+ NA  EL
Sbjct: 366 DEIFGEKCEGN--FIQPTFITDYPIEMSPLTKKHRSKEGLTERFELMVCGKEIANAYSEL 423

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE++++  +K  +E   ID+DFL  L   MP ++G+ +G DRLVM +T   
Sbjct: 424 NDPIDQRERFEEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGMDRLVMFLTNNA 483

Query: 338 NINEVIWTPFSQSNQEE 354
           +I EV++ P  +  + +
Sbjct: 484 SIQEVLFFPQMRPEKAQ 500


>gi|121635115|ref|YP_975360.1| lysyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166229812|sp|A1KUN1|SYK_NEIMF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|120866821|emb|CAM10579.1| lysyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325132393|gb|EGC55086.1| lysyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325138382|gb|EGC60950.1| lysyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 503

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIIDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|317153108|ref|YP_004121156.1| lysyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943359|gb|ADU62410.1| lysyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 502

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 158/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R                R  +   LR +  E  F+E+++ 
Sbjct: 146 LRPLPEKYHGLKDVETRYRQRYVDLIVTPRTREIFTIRTAVVRELRNFLDEKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   LY++ +PE   K+LL  G ++++     +RN 
Sbjct: 206 MMQAIPGGAT-AKPFETH---HNALDMKLYMRIAPELYLKRLLVGGFDRVYEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS--EP 165
                H PEFTMLE+Y A+ ++  LM     +    AE                 S    
Sbjct: 262 GISTQHNPEFTMLEFYWAYANFTDLMDLTEEMFSRVAEKVTGSSVVPYQGEMIDLSVGAW 321

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +   E+  +   I            D        +  G +V   D    + +++    
Sbjct: 322 TRLPFHESLEKIGGI------PREVYSDYEQCKALVRGRGEKVVEGDKLGKLQAKLFDIL 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +     +  YP   S L+     +P  T RFEL+    E+ NA  EL DP++QR
Sbjct: 376 VEPK--LIQPHFIYHYPTDISPLSRRNEENPDITDRFELFMTGREMANAFSELNDPVDQR 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE++++EK+    E + +DED++  L   MP ++G  +G DRLVML+T + +I EVI 
Sbjct: 434 GRFEEQVKEKEAGDEEAHFMDEDYVRALEYGMPPAAGQGVGIDRLVMLLTDSASIREVIL 493

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 494 FPLLRPE 500


>gi|150392206|ref|YP_001322255.1| lysyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149952068|gb|ABR50596.1| lysyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 499

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 86/365 (23%), Positives = 165/365 (45%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+    S+R +  +  +IE+++ 
Sbjct: 136 LQVLPEKWHGLKDQDLRYRQRYVDLIVNPEVKKTFMVRSRAIKSIRSFLDDRGYIEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  + F+T     + +   +YL+ + E   K+L+  G ++++     +RN 
Sbjct: 196 ILDTIAGGAS-AKPFTTH---HNTLGIDMYLRIATELHLKRLIVGGLDRVYEIGRLFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y+ +M    NI+   A         ++Q    +      
Sbjct: 252 GMSIKHNPEFTTIELYEAYADYKDMMDITENIVAHVAENALGTTKITYQGTEIDLTPPWR 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++   YA++D        +          A++ G+ V        + + +    +
Sbjct: 312 RISMTDSCKEYADVDFS------EIKTDEEAIELAKKLGLEVRPGMKKGHVINEVFETFV 365

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S LA   P +P  T RFE +    E+ NA  EL DPI+QR 
Sbjct: 366 EKH--LMQPTFITHHPVEVSPLAKRNPDNPEITNRFEAFVNTWEIANAFSELNDPIDQRA 423

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++ +++   +E + +DEDFL  L   +P + G+ +G DRL+ML+T + +I +V+  
Sbjct: 424 RFMEQLVQREAGDDEAHMLDEDFLNALEVGLPPTGGLGIGIDRLMMLLTDSPSIRDVLLF 483

Query: 346 PFSQS 350
           P  + 
Sbjct: 484 PTMKP 488


>gi|195058964|ref|XP_001995535.1| GH17710 [Drosophila grimshawi]
 gi|193896321|gb|EDV95187.1| GH17710 [Drosophila grimshawi]
          Length = 582

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 83/374 (22%), Positives = 158/374 (42%), Gaps = 28/374 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R                R  I S +R++     F+EI++ 
Sbjct: 199 LHMLPHLHFGLKDKETRYRQRYLDLILNNKVRETFQIRAKIISYVRQFLDRLGFLEIETP 258

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+++ +PE   K L+  G ++++     +RN 
Sbjct: 259 MMNMIAGGAT-AKPFVTH---HNELKMDLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNE 314

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  +++    ++    +  +       +           
Sbjct: 315 GIDMTHNPEFTTCEFYMAYADYHDVIELTEQMVSGMVKAIHGSYKIKYHPDGPDGIEQEL 374

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +       +   +      Q     L     +  +      T + +  
Sbjct: 375 DFTPPFKRVSMIKTLEEKLQVKFPSADTFNSQETNEFLSQLCAKHQVECPAPRTTARLLD 434

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ + IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 435 KLVGDFIEETC--INPTFICDHPQIMSPLAKYHRSMPGLTERFELFVAKKEVCNAYTELN 492

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 493 DPVVQRERFEQQANDKAAGDDEAQMVDENFCTALEYGLPPTGGWGMGIDRLTMFLTDSNN 552

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 553 IKEVLLFPAMKPEE 566


>gi|167768163|ref|ZP_02440216.1| hypothetical protein CLOSS21_02719 [Clostridium sp. SS2/1]
 gi|167709687|gb|EDS20266.1| hypothetical protein CLOSS21_02719 [Clostridium sp. SS2/1]
          Length = 646

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 162/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I S +R Y     F+E+++ 
Sbjct: 137 LKPLPEKFHGLTDTDTRYRQRYVDLIMNEESKEVFIKRSKIISKIRSYLDGQGFMEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G  +  R F T     + + + + L+ S E   K+L+  G EK++     +RN 
Sbjct: 197 MLVSNAGGAS-ARPFETHY---NALSEDVKLRISLELYLKRLIVGGLEKVYEIGRVFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  AE V       +++   +     E
Sbjct: 253 GVDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRYLAEEVCGGTKIQYKDFEIDLGKPFE 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y+ +D        +          A++  +         DI +    E +
Sbjct: 313 RITMVDAVKKYSGVDFK------EIKTLEEARAAAEEHHVEYEERHKRGDILNLFFEEFV 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P DP + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 367 EDK--LIQPTFVMDHPVEISPLTKRKPEDPDYVERFEFFMNGWEMANAYSELNDPIDQRE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDFL  L   MP + GI  G DR+VML+T +  I +V+  
Sbjct: 425 RFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMVMLLTNSTAIRDVLLF 484

Query: 346 PFSQS 350
           P  +S
Sbjct: 485 PTMKS 489


>gi|152979179|ref|YP_001344808.1| lysyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|229559853|sp|A6VPH6|SYK_ACTSZ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|150840902|gb|ABR74873.1| lysyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 503

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 24/366 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   FIE+++ 
Sbjct: 146 LRPLPDKFHGLSDQETRYRQRYLDLISNEESRRTFVIRSKVIAGIREYFIGKGFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTTIVPYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A + GI +        + + I  E  
Sbjct: 322 RITMHDAVLKYG---AEKGIVKEDLYDLERAKAAATKLGIEIQKSWGLGSVVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLTAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    D+DF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKDAGDDEAMFKDDDFVTALEHGLPPTAGEGLGIDRLAMLFANAPSIRDVILF 496

Query: 346 PFSQSN 351
           P  +  
Sbjct: 497 PAMKHK 502


>gi|167465842|ref|ZP_02330931.1| lysyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 432

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 174/369 (47%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  S+R Y     F+E+++ 
Sbjct: 76  LIPLPDKFHGLQDVELRYRQRYVDLIMNQDVQKTFILRSKIIQSMRCYLDSLGFLEVETP 135

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G  +  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 136 TLHAIAGGAS-ARPFITH---HNALDMQLYMRIAIELHLKRLIVGGLEKVYEIGRVYRNE 191

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ +M+   ++I   A+ V       +Q    N      
Sbjct: 192 GVSTRHNPEFTMIELYEAYADYKDIMQLTEDLISHIAKEVLGSTTIEYQGKEVNLAGAWR 251

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA      +D    + + +       +  A++  + V  + T+  I ++     +
Sbjct: 252 RVSMVEAVREVTGVDFSVEMSDEE------AHRLAKEHNVPVEPNMTFGHIVNQFFETFV 305

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 306 EET--LIQPTFVYGHPVAISPLAKKNEEDPRFTDRFELFIVAREHANAFTELNDPIDQRE 363

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E + +DEDF+  L   +P + G+ +G DRL+ML+T A +I +V+  
Sbjct: 364 RFEAQLREREQGNDEAHMMDEDFIRALEYGLPPTGGLGIGVDRLIMLLTNAPSIRDVLLF 423

Query: 346 PFSQSNQEE 354
           P  +  Q E
Sbjct: 424 PTMRERQAE 432


>gi|323971673|gb|EGB66902.1| lysyl-tRNA synthetase [Escherichia coli TA007]
          Length = 505

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKMEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|116871612|ref|YP_848393.1| lysyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123460668|sp|A0AF28|SYK_LISW6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116740490|emb|CAK19610.1| lysyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 498

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 161/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDSQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      ++     +      
Sbjct: 260 GTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + +A+    Y  +D      + +          A++  + +    T+  I +      +
Sbjct: 320 RVHMADVVKEYVGVDFWNVTSDEE------ARELAKKHDVAITEHMTYGHILNEFFETYV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  
Sbjct: 432 RFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGVDRLVMLLTDAPSIRDILLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PTMKHR 497


>gi|294671198|ref|ZP_06736052.1| hypothetical protein NEIELOOT_02906 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307136|gb|EFE48379.1| hypothetical protein NEIELOOT_02906 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 503

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     S+     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILDAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 ESK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|261401860|ref|ZP_05987985.1| lysine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269207986|gb|EEZ74441.1| lysine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 503

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|56751700|ref|YP_172401.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81301224|ref|YP_401432.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81561805|sp|Q5N1D9|SYK_SYNP6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123769185|sp|Q31KH4|SYK_SYNE7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56686659|dbj|BAD79881.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81170105|gb|ABB58445.1| lysyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 504

 Score =  340 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 159/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +++R +  +  FIEI++ 
Sbjct: 142 LQPLPDKWHGLTDVEKRYRQRYVDLIVNPEVRETFRRRAKITAAIRRHLEDQGFIEIETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 202 VLQAEAGGA-EARPFIT---YHNTLELDLYLRIATELHLKRLIVGGFEKVFELGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  YE +M+    +I + A +V       +Q    +     +
Sbjct: 258 GISTRHNPEFTSIEVYQAYADYEDMMRLTETLIAQVAEQVVGSLQVPYQGQTIDLAPPWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEK 225
             T+AE       ID           D        + AGI V  D      + +    EK
Sbjct: 318 RATMAELVLAATGID------FESLKDLEAGIAAVKAAGIPVPEDCPNLGKLLNHCFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  + + P   +RFEL+    E  N+  EL DP++QR
Sbjct: 372 VEAT--LIQPTFVIDYPVEISPLAKPHRSKPGLVERFELFIVGRETANSFSELTDPVDQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +  +K     E   +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 430 QRLEAQAADKAAGNVEANDVDEDFLLALEHGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 489

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 490 FPLLRPE 496


>gi|329296880|ref|ZP_08254216.1| lysyl-tRNA synthetase [Plautia stali symbiont]
          Length = 506

 Score =  340 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 161/365 (44%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLISNDDSRKTFKIRSQIMAGIRQFMVNRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       +     +     E
Sbjct: 266 GISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTEVPYGEHTFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       A    I+V        + + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDLADLDDFDKAVAIANALHIKVEKSWGLGRVVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DRLVML T ++ I +VI  
Sbjct: 439 RFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRLVMLFTNSHTIRDVILF 498

Query: 346 PFSQS 350
           P  + 
Sbjct: 499 PALRP 503


>gi|24214695|ref|NP_712176.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|39932210|sp|Q8F4P5|SYK_LEPIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24195684|gb|AAN49194.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 495

 Score =  340 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 89/373 (23%), Positives = 160/373 (42%), Gaps = 34/373 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR R              + R+ I S +R +  +  
Sbjct: 135 IRPLPVVKEKDGVVYDAFADVEQRYRMRYVDLIVNDHVRDTFITRSKIVSEIRSFLTQEG 194

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           F+E+++  +Q   G     R F T     + +   L+L+ +PE   K+L+  G +++F  
Sbjct: 195 FLEVETPMMQPIAGGAA-ARPFVTH---HNTLDMQLFLRIAPELYLKRLIVGGMDRVFEL 250

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNC 159
              +RN      H PEFTM+E Y A      ++     +I   A+ +       +     
Sbjct: 251 NRNFRNEGISTKHNPEFTMMEAYMAFGDMSTMLDLTERLITHLAQKICGTLKIQYGKDLI 310

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     +  T  +    Y+ ID    +             +A +  + V+   T   +  
Sbjct: 311 DLSPPWKRTTYVDIIKEYSGIDFSQIIS------LEEAKKKASELKVDVSKCQTIWKVAD 364

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            +  EK EPN  +     +  YP   S LA   P  P + +RFE Y    E+ NA  EL 
Sbjct: 365 EVFSEKAEPN--LIQPIFITDYPKELSPLAKSNPDKPGYVERFEPYVAGREIGNAFTELN 422

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +Q+ RFE ++++++   +E + +DED++  L   MP + G+ +G DRLVML+T +++
Sbjct: 423 DPFDQKERFEDQVKQREAGDDEAFMMDEDYIRALEYGMPPTGGLGIGIDRLVMLLTNSHS 482

Query: 339 INEVIWTPFSQSN 351
           I + I  P  +  
Sbjct: 483 IRDTILFPLMRPE 495


>gi|319399674|gb|EFV87928.1| lysyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 495

 Score =  340 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 165/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y  +  F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTQTFINRSKIIQEMRNYLNKQGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    N++R  A+         +     +  S  +
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTENMVRHIAQEVFGSAKVQYNGEEIDLESSWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D      +            A++  I +  +  +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVDFYNVNSD------EEAIRLAKEHDIEITENMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EET--LIQPTFIYGHPIEISPLAKKNPNDERFTDRFELFIVGREHANAFTELNDPIDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK++  +E + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 430 RFEAQLVEKEQGNDEAHDMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLF 489

Query: 346 PFSQ 349
           P+ +
Sbjct: 490 PYMR 493


>gi|89890462|ref|ZP_01201972.1| lysine--tRNA ligase, LysRS [Flavobacteria bacterium BBFL7]
 gi|89517377|gb|EAS20034.1| lysine--tRNA ligase, LysRS [Flavobacteria bacterium BBFL7]
          Length = 563

 Score =  340 bits (871), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 103/378 (27%), Positives = 169/378 (44%), Gaps = 36/378 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  + +++R +F E 
Sbjct: 137 LKPLPLPKVDAEGKVHDGFVDPEMRYRQRYADLVVNPQVKEVFVKRTKLFNAMRNFFNER 196

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
           ++ E+++  LQ  PG     R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 197 EYFEVETPILQPIPGGAA-ARPFITH---HNSLDIPLYMRIANELYLKRLIVGGFDGVYE 252

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M     ++   A   N K  S F    
Sbjct: 253 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTERLLEHCAVSVNGKTSSQFGEQT 312

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
               +    IT+ ++   +   D+       D      LY  A+  GI V        + 
Sbjct: 313 IEWKAPYPRITMRQSIIDFTGFDI-------DGKSEADLYAFAKAEGIDVDTTMGKGKLI 365

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 366 DEIFGEKCEGNY--IQPTFITDYPKEMSPLCKAHRDNPELTERFELMVCGKEIANAYSEL 423

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE ++    +  +E   ID+DFL  L   MP +SG+ +G DRL+M +T   
Sbjct: 424 NDPIDQRERFEAQVALADRGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNP 483

Query: 338 NINEVIWTPFSQSNQEEI 355
           +I EV++ P  +  ++ +
Sbjct: 484 SIQEVLFFPQMKPEKKAL 501


>gi|254421242|ref|ZP_05034960.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196188731|gb|EDX83695.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 524

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 28/370 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR  I +++R +  +  ++E+++ 
Sbjct: 161 LLPLPDKFHGLTDVAKRYRQRYVDLIVNPEVRDTFRKRAKITAAIRRHLDQLGYLEVETP 220

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +   LYL+ + E   K+++  G EK+F     +RN 
Sbjct: 221 VLQSEPGGA-EARPFVT---YHNTLDMELYLRIATELHLKRMVVGGFEKVFELGRVFRNE 276

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  YE +M     +I          K  ++Q    +     +
Sbjct: 277 GISTRHNPEFTTIEMYQAYGDYEDMMSLTETMIEQIVVEVTGSKGVTYQGEEISFARPWQ 336

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI-RVAHDDTWSDIFSRILIEK 225
            IT+ +A      ID           D       A++AGI  V   ++   + +    +K
Sbjct: 337 RITMHDAVREKTGIDFVQI------KDLAKAKQAAKEAGINEVEACESIGHVLNEAFEQK 390

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S L+  + + P   +RFEL+    E  N   EL DP++QR
Sbjct: 391 VETT--LVQPTFITDYPVEISPLSKPHRSKPGLVERFELFIVGRETANGFSELTDPVDQR 448

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +  +K+    E + +DEDFL  L   MP + G+ +G DRLVM++T A +I + I 
Sbjct: 449 ERLELQAAKKEAGNLEAHSVDEDFLTALEYGMPPTVGMGIGIDRLVMVLTDAASIRDAIA 508

Query: 345 TPFSQSNQEE 354
            P  +S + E
Sbjct: 509 FPLLKSEKTE 518


>gi|59801795|ref|YP_208507.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|239999529|ref|ZP_04719453.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240014706|ref|ZP_04721619.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240017153|ref|ZP_04723693.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240081208|ref|ZP_04725751.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240113420|ref|ZP_04727910.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240116233|ref|ZP_04730295.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240118517|ref|ZP_04732579.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|240121228|ref|ZP_04734190.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|240124061|ref|ZP_04737017.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240126319|ref|ZP_04739205.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|240128726|ref|ZP_04741387.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|254494246|ref|ZP_05107417.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|260439953|ref|ZP_05793769.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268595341|ref|ZP_06129508.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268597319|ref|ZP_06131486.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268599493|ref|ZP_06133660.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268601895|ref|ZP_06136062.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268604225|ref|ZP_06138392.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268682686|ref|ZP_06149548.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268684904|ref|ZP_06151766.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268687112|ref|ZP_06153974.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291043238|ref|ZP_06568961.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|293398557|ref|ZP_06642735.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|75355660|sp|Q5F6U2|SYK_NEIG1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|59718690|gb|AAW90095.1| putative lysyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|226513286|gb|EEH62631.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268548730|gb|EEZ44148.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268551107|gb|EEZ46126.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268583624|gb|EEZ48300.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268586026|gb|EEZ50702.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268588356|gb|EEZ53032.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268622970|gb|EEZ55370.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268625188|gb|EEZ57588.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268627396|gb|EEZ59796.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291012844|gb|EFE04827.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291611028|gb|EFF40125.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|317164775|gb|ADV08316.1| lysyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 503

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T    I +VI  
Sbjct: 438 RFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDLQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|325198560|gb|ADY94016.1| lysyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 503

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANGESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIIDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|331086545|ref|ZP_08335623.1| hypothetical protein HMPREF0987_01926 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410378|gb|EGG89810.1| hypothetical protein HMPREF0987_01926 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 649

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I S++R+Y     F+E+++ 
Sbjct: 141 LQILPEKFHGLTNTDLRYRQRYVDLIMNPDVKDTFIKRSKILSAIRKYLDGQGFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G E+++     +RN 
Sbjct: 201 ILVSNAGGAA-ARPFETHF---NALNEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V      ++  V  +     E
Sbjct: 257 GLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRFVAQEVLGTTKITYGGVEMDLGKPFE 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y  ID        +          A++  +         DI S      +
Sbjct: 317 RITMVDAVKKYTGIDWN------EVTTLKEARELAKEHKVEFEERHKKGDILSLFFEAFV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFE +    E+ NA  EL DPI+QR 
Sbjct: 371 EEH--LIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELNDPIDQRA 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDFL  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 429 RFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLF 488

Query: 346 PFSQS 350
           P  +S
Sbjct: 489 PTMKS 493


>gi|325134355|gb|EGC57000.1| lysyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 503

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDTEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|68249757|ref|YP_248869.1| lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335815|sp|Q4QL88|SYK_HAEI8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|68057956|gb|AAX88209.1| lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 502

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATVKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|238921195|ref|YP_002934710.1| lysyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511526|sp|C5BAR6|SYK_EDWI9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238870764|gb|ACR70475.1| lysyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 505

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 162/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I +++R + V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLSDQETRYRQRYLDLIANESSRETFRTRSKILAAIRNFMVNKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R  ++ V    +  + +   +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTISQDVLGSSVVQYGDQTFDFGKPFI 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA   Y        + + D  D       A+  GI++        +   I  E  
Sbjct: 326 KMSMKEAICHY-----RPDIASADLDDMDKACKIAESLGIKIEKSWGLGRVQCEIFDETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESQ--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +++ K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQDQVKAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGVGIDRMMMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|325142613|gb|EGC65005.1| lysyl-tRNA synthetase [Neisseria meningitidis 961-5945]
          Length = 503

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIIDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|313667866|ref|YP_004048150.1| lysyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005328|emb|CBN86761.1| lysyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 503

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|325479516|gb|EGC82612.1| lysine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 632

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 165/369 (44%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              ++R+ I S +R +     F+E+++ 
Sbjct: 135 LQILPEKWHGLKDPDLRYRQRYLDLIVNPEVKDVFVQRSQIISEIRRFLDGRGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F+T     + +   +YL+ + E   K+L+  G +K++     +RN 
Sbjct: 195 ILNTIAGGAT-ARPFTTH---HNSLNIGMYLRIASELYLKRLIVGGFDKVYEIGRMFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +E +M+    ++   A+      +  F        +  +
Sbjct: 251 GMDATHNPEFTTMELYQAYGDFEDMMEITETMVETVAQKVKGTTVVEFDGNEIELKAPWK 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A   Y+ +D        +  D      +A++  + V    T  +I +    E +
Sbjct: 311 RMTMIDAVKEYSGVDFN------EISDYDEAVSKAKENNVEVK--GTIGEIIAEFFDEFV 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     D   T RFE +    E+ NA  EL D  +Q+ 
Sbjct: 363 EDK--LIQPTFITDYPVEISPLAKRKNDDENLTYRFEAFINGAEIANAFSELNDAADQKG 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +++   +E   +D DF+  L   MP + G+ +G DRL+M++TG ++I +V+  
Sbjct: 421 RFLDQVAKREAGDDEAQMMDYDFVNALEVGMPPTGGLGIGIDRLIMILTGQHSIRDVLLF 480

Query: 346 PFSQSNQEE 354
           P  +   +E
Sbjct: 481 PTMKPIGQE 489


>gi|308187993|ref|YP_003932124.1| lysyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308058503|gb|ADO10675.1| lysyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 506

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 164/368 (44%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANEESRNTFKIRSQIMAGIRQFMVGRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V    +  +     +     E
Sbjct: 266 GISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGSTVVPYGEQEFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       AQ   I+V        + + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDLADLEDFDKAVAIAQSLHIKVEKSWGLGRVVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 499 PALRPGSK 506


>gi|254785321|ref|YP_003072750.1| lysine--tRNA ligase [Teredinibacter turnerae T7901]
 gi|259511535|sp|C5BRM0|SYK_TERTT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|237687139|gb|ACR14403.1| lysine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 498

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 162/371 (43%), Gaps = 31/371 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              L R+ I   +R+Y    +F+E+++ 
Sbjct: 139 LRPLPDKYHGLADQELRYRQRYVDLIANPEVRKTFLLRSRIVQFIRDYLNGREFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 199 MLQAIPGGAT-ARPFETH---HNALDIDMYLRIAPELYLKRLVVGGFERVYEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ------KIFSFQNVNCNP 161
                H PEFTMLE+Y+A+  Y  LM    +++R  A+           +   ++V  + 
Sbjct: 255 GLSTRHNPEFTMLEFYQAYADYNDLMDLTEDMLRNLAQTVLGSTEVTATLGEDESVTYDF 314

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                 ++V ++   +        L   D          A+  GI +  +     +   I
Sbjct: 315 AKPFVRLSVFDSILHF-----NPDLKAEDIDSPESARAVAKNLGIPMKDNWGLGKVQIEI 369

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             + +E    +   T +  YP   S LA     +P  T RFE +    E+ N   EL D 
Sbjct: 370 FEKTVEHR--LIQPTFITEYPTEVSPLARRNDDNPFVTDRFEFFVGGREIANGFSELNDA 427

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +Q  RF++++ EK    +E    D D++  L   +P ++G  +G DRLVML+T + +I 
Sbjct: 428 EDQADRFKQQVAEKNAGDDEAMHYDADYVRALEYGLPPTAGEGIGIDRLVMLLTDSASIR 487

Query: 341 EVIWTPFSQSN 351
           +V+  P  +  
Sbjct: 488 DVLLFPHMRPE 498


>gi|156932659|ref|YP_001436575.1| lysyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166229806|sp|A7MR65|SYK_ENTS8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|156530913|gb|ABU75739.1| hypothetical protein ESA_00442 [Cronobacter sakazakii ATCC BAA-894]
          Length = 505

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLIANDESRKTFKVRSQILAGIRQFMVGRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       +     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTQVPYGEETFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       AQ  GI+V        + + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDLADLDDFEKAKGIAQAVGIKVEKSWGLGRVVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|188995021|ref|YP_001929273.1| lysyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|238691484|sp|B2RJY1|SYK_PORG3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|188594701|dbj|BAG33676.1| lysyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 578

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 106/374 (28%), Positives = 167/374 (44%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR M+ +S+R +F E  
Sbjct: 144 IRPLPVVKEKDGEVFDGFTDSEQRYRQRYVDLVVNSHVKDIFLKRTMVFNSMRSFFNERG 203

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           +IE+D+  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G + ++ F
Sbjct: 204 YIEVDTPVLQSIPGGAA-ARPFITH---HNALDIPLYLRIANELYLKRLIVGGFDGVYEF 259

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNC 159
           +  +RN      H PEFT +E Y A++ Y  +M     ++ R   +V             
Sbjct: 260 SRNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMNFTEQMLERICMDVLGTTQVKVGEKLI 319

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    +T+ EA   +  ID+          +   L     + G+          +  
Sbjct: 320 DFKAPYRRVTMIEAIHEHTGIDISGM-------NEAELRQVCDKLGVEHNETMGKGKLID 372

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  EK E N      T +  YP   S L   +  +P  T+RFEL     EL NA  EL 
Sbjct: 373 EIFGEKCEKNY--IQPTFITDYPKEMSPLTKEHRTNPELTERFELMVNGKELANAYSELN 430

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+QR RFE++++  +K  +E   ID DF+  L   MP +SG+ +G DRLVML+TG  +
Sbjct: 431 DPIDQRERFEEQLKLSEKGDDEAMYIDNDFIRALEYGMPPTSGMGIGMDRLVMLLTGQES 490

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 491 IQEVLLFPQMKPEK 504


>gi|149699374|ref|XP_001501628.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 1 [Equus caballus]
          Length = 597

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 208 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 267

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 268 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 323

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +           
Sbjct: 324 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYHPDGPEGQAQEI 383

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + E   +   + L  T     +  R +L       G+      T + +  
Sbjct: 384 DFTPPFRRINMVEELEKVLGVKLPETNLFETEETRKILDDICVAKGVECPPPRTTARLLD 443

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 444 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 501

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 502 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNN 561

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 562 IKEVLLFPAMKPEDKK 577


>gi|295132554|ref|YP_003583230.1| lysyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294980569|gb|ADF51034.1| lysyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 563

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 171/379 (45%), Gaps = 37/379 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  + S++R +F E 
Sbjct: 136 IRPLPLPKTDKEGNTYDGFTDPEHRYRQRYADLAVNPKVKEIFVKRTKLFSAMRNFFNEA 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            + E+++  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 196 GYFEVETPILQSIPGGAA-ARPFITH---HNALDIPLYLRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M     ++   A         +F    
Sbjct: 252 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTEKLLEHCAMAVNGTTEATFGKHQ 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +  + +T+ +A   +   D+              L+  A+  GI V        + 
Sbjct: 312 VDFKAPYKRVTMTDAIIEFTGFDITG-------KSEAELFEAAKSMGIEVDKTMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGEKCEGNY--IQPTFITDYPKEMSPLCKTHRENPELTERFELMVCGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPI+QR RFE++++  +K  +E    ID+DFL  L   MP +SG+ +G DRLVM +T  
Sbjct: 423 NDPIDQRERFEEQLRLAEKGDDEATEFIDQDFLRALEYGMPPTSGLGIGMDRLVMFLTNN 482

Query: 337 NNINEVIWTPFSQSNQEEI 355
            +I EV++ P  +  ++++
Sbjct: 483 QSIQEVLFFPQMKPEKKQV 501


>gi|118581419|ref|YP_902669.1| lysyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118504129|gb|ABL00612.1| lysyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 503

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 169/367 (46%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +     D    YR+R              +KR+ I + +R +     F+E+++ 
Sbjct: 147 LHPLPEKFHGLTDVETRYRQRYVDLIVNPESREIFIKRSRIINLIRAFMTARDFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   L+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 207 MMQRIPGGAT-AKPFITH---HNALDMQLFLRIAPELYLKRLVVGGMERVFEINRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ +YE LM     +    A+ V     F  Q    +     +
Sbjct: 263 GISVRHNPEFTMMEFYQAYATYEDLMNFTEELFCHVAQEVLGTLDFVNQGREISFQRPWK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV +A   Y +ID           DR L  + A+  G+ +  D     +   I  E  
Sbjct: 323 RLTVRDAILEYGDIDAKK------LDDRDLALIYARSIGLDLPDDIGHGKLMMEIFEEVA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     +P    RFEL     E+ NA  EL DP++Q+ 
Sbjct: 377 EHK--LIQPTFVTAYPTEVSPLSRKNDHNPDIVDRFELIVGGREIANAFSELNDPVDQKE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK K   E + +DED++  L   +P ++G  +G DRLVML+T + +I +VI  
Sbjct: 435 RFLSQVAEKAKGDEEAHYMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDSASIRDVILF 494

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 495 PQLRKEK 501


>gi|206578828|ref|YP_002236653.1| lysyl-tRNA synthetase LysS [Klebsiella pneumoniae 342]
 gi|288933630|ref|YP_003437689.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290511304|ref|ZP_06550673.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|206567886|gb|ACI09662.1| lysyl-tRNA synthetase LysS [Klebsiella pneumoniae 342]
 gi|288888359|gb|ADC56677.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289776297|gb|EFD84296.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 505

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILAGIRQFMVGRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +       + +   +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGNTEVPYGDQVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  +       A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETEMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVDAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|34541056|ref|NP_905535.1| lysyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|39932028|sp|Q7MUV7|SYK_PORGI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|34397371|gb|AAQ66434.1| lysyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 578

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 106/374 (28%), Positives = 168/374 (44%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR M+ +S+R +F E  
Sbjct: 144 IRPLPVVKEKDGEVFDGFTDPEQRYRQRYVDLVVNSHVKDIFLKRTMVFNSMRSFFNECG 203

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           +IE+D+  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G + ++ F
Sbjct: 204 YIEVDTPVLQSIPGGAA-ARPFITH---HNALDIPLYLRIANELYLKRLIVGGFDGVYEF 259

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNC 159
           +  +RN      H PEFT +E Y A++ Y  +M     ++ R   +V             
Sbjct: 260 SRNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMNFTEQMLERICMDVLGTTQMKVGGKLI 319

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +  + +T+ EA   +  ID+          +   L     + G+          +  
Sbjct: 320 DFKAPYKRVTMIEAIHEHTGIDISGM-------NEAELRQVCDKLGVEHNETMGKGKLID 372

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  EK E N      T +  YP   S L   +  +P  T+RFEL     EL NA  EL 
Sbjct: 373 EIFGEKCEKNY--IQPTFITDYPKEMSPLTKEHRTNPELTERFELMVNGKELANAYSELN 430

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+QR RFE++++  +K  +E   ID DF+  L   MP +SG+ +G DRLVML+TG  +
Sbjct: 431 DPIDQRERFEEQLKLSEKGDDEAMYIDNDFIRALEYGMPPTSGMGIGMDRLVMLLTGQES 490

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 491 IQEVLLFPQMKPEK 504


>gi|15803426|ref|NP_289459.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15833016|ref|NP_311789.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168747633|ref|ZP_02772655.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4113]
 gi|168753827|ref|ZP_02778834.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4401]
 gi|168760017|ref|ZP_02785024.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4501]
 gi|168766882|ref|ZP_02791889.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4486]
 gi|168775766|ref|ZP_02800773.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4196]
 gi|168778902|ref|ZP_02803909.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4076]
 gi|168785735|ref|ZP_02810742.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC869]
 gi|168800022|ref|ZP_02825029.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC508]
 gi|195936507|ref|ZP_03081889.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208809534|ref|ZP_03251871.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4206]
 gi|208814126|ref|ZP_03255455.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4045]
 gi|208818755|ref|ZP_03259075.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4042]
 gi|209398148|ref|YP_002272364.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4115]
 gi|217327355|ref|ZP_03443438.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. TW14588]
 gi|254794841|ref|YP_003079678.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261226203|ref|ZP_05940484.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256542|ref|ZP_05949075.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str.
           FRIK966]
 gi|39932437|sp|Q8XD57|SYK1_ECO57 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|12517416|gb|AAG58018.1|AE005519_4 lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation
           in primer RNA [Escherichia coli O157:H7 str. EDL933]
 gi|13363234|dbj|BAB37185.1| lysine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187768800|gb|EDU32644.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4196]
 gi|188017948|gb|EDU56070.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4113]
 gi|189003227|gb|EDU72213.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4076]
 gi|189358608|gb|EDU77027.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4401]
 gi|189363788|gb|EDU82207.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4486]
 gi|189369387|gb|EDU87803.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4501]
 gi|189373868|gb|EDU92284.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC869]
 gi|189377631|gb|EDU96047.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC508]
 gi|208729335|gb|EDZ78936.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4206]
 gi|208735403|gb|EDZ84090.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4045]
 gi|208738878|gb|EDZ86560.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4042]
 gi|209159548|gb|ACI36981.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. EC4115]
 gi|209760608|gb|ACI78616.1| lysine tRNA synthetase [Escherichia coli]
 gi|209760610|gb|ACI78617.1| lysine tRNA synthetase [Escherichia coli]
 gi|209760612|gb|ACI78618.1| lysine tRNA synthetase [Escherichia coli]
 gi|209760616|gb|ACI78620.1| lysine tRNA synthetase [Escherichia coli]
 gi|217319722|gb|EEC28147.1| lysyl-tRNA synthetase LysS [Escherichia coli O157:H7 str. TW14588]
 gi|254594241|gb|ACT73602.1| lysine tRNA synthetase, constitutive [Escherichia coli O157:H7 str.
           TW14359]
 gi|320189233|gb|EFW63892.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320640533|gb|EFX10072.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320645780|gb|EFX14765.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320651080|gb|EFX19520.1| lysyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320667171|gb|EFX34134.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326339027|gb|EGD62842.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326343091|gb|EGD66859.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 505

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +        +  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIVESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|148828360|ref|YP_001293113.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|229559859|sp|A5UIX4|SYK_HAEIG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148719602|gb|ABR00730.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 502

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATVKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|300814671|ref|ZP_07094922.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511290|gb|EFK38539.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 640

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 165/365 (45%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              LKR  I  ++R+Y  +  FIE+++ 
Sbjct: 137 LQILPEKFHGLKDPDLRYRQRYVDLIVNPEIKEVFLKRTKIIKAIRQYLDDKGFIEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   + L+ + E   K+L+  G +K++     +RN 
Sbjct: 197 ILGTVAGGA-NARPFLTH---HNTLDIDMQLRIANELFLKRLIVGGFDKVYEMGKMFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   +++M    NI   AA+        ++Q    +  +   
Sbjct: 253 GMDTRHNPEFTNIELYQAYVDMDEMMAITENIFEYAAQKVLGTDKITYQGTEISLKAPWR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA   YA +D      +            A++ G+ V    +W  I S       
Sbjct: 313 RMSMIEAVKEYAGVDFDKVQTD------EQAQQLAKEKGVEVEEGSSWGKILSEFFETFC 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D R T+RFE +    E  NA  EL DPI+QR 
Sbjct: 367 EEK--LVQPTFITGHPVDISPLAKKDPKDTRLTRRFEAFINTWEFANAFSELNDPIDQRE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E +K   E +P+D DF+  +   +P + G+ +G DR++ML+T   +I ++I  
Sbjct: 425 RFEAQVREHEKGDEEAHPMDSDFINAIEVGLPPTGGLGIGVDRMIMLLTDQPSIRDIILF 484

Query: 346 PFSQS 350
           P  + 
Sbjct: 485 PTMKP 489


>gi|238896430|ref|YP_002921168.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|262042531|ref|ZP_06015688.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|330010997|ref|ZP_08306941.1| lysine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|238548750|dbj|BAH65101.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259040091|gb|EEW41205.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|328534334|gb|EGF60945.1| lysine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 505

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKVRSQILAGIRQFMVGRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +       + +   +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGNTEVPYGDQVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  +       A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETEMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVDAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|254672942|emb|CBA07339.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|325136531|gb|EGC59135.1| lysyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 503

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V  +++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNERYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIIDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|330839287|ref|YP_004413867.1| Lysyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329747051|gb|AEC00408.1| Lysyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 511

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 159/365 (43%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  S+R Y  E  F+E+++ 
Sbjct: 148 LRPLPEKFHGLKDVEMRYRQRYVDLIMNPEVKDTFIARTKIIQSIRRYLDERGFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LYL+ + E + K+L+  G E+++     +RN 
Sbjct: 208 VMSTIAGGAA-ARPFVT---YHNALDMKLYLRIATELNLKRLIVGGLERVYEIGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A+  Y  LM     I   AA+                 S+   
Sbjct: 264 GIDVRHNPEFTSIEIYQAYADYNDLMDVTEGICCQAAKDVLGTTALTYEGTEIDLSKIRR 323

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I++ +A       D  +     +          A   G+          I +     K+E
Sbjct: 324 ISMNDAVKEATGKDFMSAQTVEE------ARAMADAIGVAYEEKHGIGGILNEAFEAKVE 377

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +  +   T +  +P   S LA   P DPR T RFE Y    EL N   EL DPI+Q+ R
Sbjct: 378 ES--LIQPTFITGHPTEISPLAKRNPEDPRITDRFEFYVYGRELANGFTELNDPIDQKER 435

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F +++++++   +E +P+D DF+  +   +P + G+ +G DRLVML+T +++I +V++ P
Sbjct: 436 FLEQVKQREAGDDEAHPMDSDFITAMEYGLPPTGGLGIGIDRLVMLLTDSSSIRDVLFFP 495

Query: 347 FSQSN 351
             +  
Sbjct: 496 HMRPE 500


>gi|325205820|gb|ADZ01273.1| lysyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 503

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDQQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|228474093|ref|ZP_04058834.1| lysine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228274607|gb|EEK13448.1| lysine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 561

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 109/378 (28%), Positives = 172/378 (45%), Gaps = 36/378 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR R              LKRN + +++REYF  +
Sbjct: 134 LRPLPLPKVDAQGKVHDEFNDVEQRYRMRYVDLVVNPQVKEVFLKRNRLFNAMREYFNNH 193

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            +IE+++  LQ  PG  +  R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 194 GYIEVETPILQAIPGGAS-ARPFITH---HNALDIPLYMRIANELYLKRLIVGGFDGVYE 249

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVN 158
           FA  +RN      H PEFT +E Y A++ Y  +M+   N++   A+        +F    
Sbjct: 250 FAKNFRNEGMDRTHNPEFTGMEIYVAYKDYNWMMEFTENLLEYCAKAVNGTTKTTFGKHE 309

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    +T+ EA  R+   D+              L   AQ  GI V        + 
Sbjct: 310 VDFKAPYPRVTMTEAIKRFTGFDITG-------KSEDELRTFAQSIGIEVDDTMGKGKLI 362

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   + +D   T+RFEL  C  E+ NA  EL
Sbjct: 363 DEIFGEKCEGN--FIQPTFITDYPKEMSPLTKEHRSDKNLTERFELMVCGKEIANAYSEL 420

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE +M   ++  +E   ID+DFL  L   MP +SG+ +G DRL+M +T   
Sbjct: 421 NDPIDQRERFEAQMALSERGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNE 480

Query: 338 NINEVIWTPFSQSNQEEI 355
            I EV++ P  +   +E+
Sbjct: 481 TIQEVLFFPQMRPEHKEV 498


>gi|253702017|ref|YP_003023206.1| lysyl-tRNA synthetase [Geobacter sp. M21]
 gi|251776867|gb|ACT19448.1| lysyl-tRNA synthetase [Geobacter sp. M21]
          Length = 492

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 100/368 (27%), Positives = 171/368 (46%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR+ +   +R++  +N F+E+++ 
Sbjct: 137 LLPLPEKFHGLTDVETRYRQRYVDLIVSPDVREVFYKRSRVIQLIRDFMTKNDFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F+T     + +   L+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 197 MMHPIPGGAT-AKPFATH---HNALDMELFLRIAPELYLKRLVVGGFERVFEINRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ ++E LM     ++   A+       FS+     +      
Sbjct: 253 GISVRHNPEFTMMEFYQAYATFEDLMNYTEELLCHVAQELLGTLDFSYGGEPISFQRPWR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             TV EA   Y +ID  +        DR L Y  +Q+ G+ +  D  +  + + I  E  
Sbjct: 313 RFTVKEAILEYGDIDAKS------LEDRDLAYAYSQKIGLELPEDVGYGKLITEIFEEVA 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     DP +  RFE +    E+ NA  EL DP +Q+ 
Sbjct: 367 EVK--LIQPTFITNYPTEVSPLSRKSDQDPEYVDRFEFFCAGREMANAFSELNDPRDQKE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K K   E + +DED++  L   +P ++G  +G DRLVML+T + +I +VI  
Sbjct: 425 RFLAQVAAKDKGDEEAHYMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDSPSIRDVILF 484

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 485 PQLRKEAK 492


>gi|154505279|ref|ZP_02042017.1| hypothetical protein RUMGNA_02793 [Ruminococcus gnavus ATCC 29149]
 gi|153794477|gb|EDN76897.1| hypothetical protein RUMGNA_02793 [Ruminococcus gnavus ATCC 29149]
          Length = 655

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 160/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              + R+ I S++R Y     F+E+++ 
Sbjct: 152 LQILPEKFHGLTNTDIRYRQRYVDLIMNPDVKQTFINRSKILSAIRRYLDGQGFLEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G E+++     +RN 
Sbjct: 212 MLVSNAGGAA-ARPFETHF---NALDEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V    +  +  V  +     E
Sbjct: 268 GLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTTVIEYNGVQMDLGKPFE 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D        +          A++  +         DI +    E  
Sbjct: 328 RITMVDAVKKYAGVDWN------EVETLEQARALAKEHHVEFEERHKKGDILALFFEEFA 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFE +    E+ NA  EL DPI+QR 
Sbjct: 382 EEH--LIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELNDPIDQRE 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +  +E    DEDFL  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 440 RFKAQEELLAQGDDEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLF 499

Query: 346 PFSQSN 351
           P  +S 
Sbjct: 500 PTMKSQ 505


>gi|126658229|ref|ZP_01729379.1| lysyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126620378|gb|EAZ91097.1| lysyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 573

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R  I +S+R Y     FIEI++ 
Sbjct: 156 LLPLPDKWHGLTDTEKRYRQRYVDLIVNPQVRQTFRHRAQITASIRRYLDNQGFIEIETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 216 VLQSEAGGA-EARPFIT---YHNTLEMDLYLRIATELHLKRLIVGGFEKVFEMGRIFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M+    II  AA+ V      ++Q    +  +   
Sbjct: 272 GVSTKHNPEFTSIEIYQAYADYNDMMELTEAIITTAAQEVLGDSKITYQGEKIDISTPWR 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            +T+ E     + +D           D        + A + V         + + +  + 
Sbjct: 332 RVTMHEIVKEKSGLD------FEKFKDFESAKDAVKNAELEVPETCQSLGKLLNEVFEQT 385

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA  + +     +RFELY    EL N+  EL DPI+QR
Sbjct: 386 VEET--LIQPTFILDFPVEISPLAKPHRSKQGLVERFELYIVGRELANSFSELTDPIDQR 443

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +R EK+ ++K     E + +DEDFL  L   MP + G+ +G DRL+ML+T + +I +VI 
Sbjct: 444 NRLEKQAEQKAAGDLEAHSVDEDFLTALEYGMPPTGGLGIGIDRLIMLLTDSASIRDVIA 503

Query: 345 TPFSQSN 351
            P  +S 
Sbjct: 504 FPLLKSQ 510


>gi|325201876|gb|ADY97330.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325208371|gb|ADZ03823.1| lysyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 503

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIIDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|260582140|ref|ZP_05849934.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094772|gb|EEW78666.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 502

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATVKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|229525317|ref|ZP_04414722.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae bv. albensis
           VL426]
 gi|229338898|gb|EEO03915.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae bv. albensis
           VL426]
          Length = 510

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 166/368 (45%), Gaps = 22/368 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +         +  
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGKYA 324

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y  N      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 325 RMSMFDAIKHYNPNHAHIQALTEEDIQNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 443 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 502

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 503 FPAMRPQQ 510


>gi|325144654|gb|EGC66952.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240013]
 gi|325204413|gb|ADY99866.1| lysyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 503

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 163/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V  +++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNERYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     S+     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|332703876|ref|ZP_08423964.1| Lysyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554025|gb|EGJ51069.1| Lysyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 523

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 158/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              LKR  +   +R +     F+E+++ 
Sbjct: 168 LRPLPDKWHGLKDVEMRYRQRYVDLIVTPRTREIFLKRTQVVREMRNFLDREGFMEVETP 227

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   LY++ +PE   K+LL  G EK++     +RN 
Sbjct: 228 MMQPIPGGAT-AKPFETH---HNALDMKLYMRIAPELYLKRLLVGGFEKVYEVNRNFRNE 283

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--P 165
                H PEFTM E+Y A+ ++E LM     +    A+                 +    
Sbjct: 284 GISTQHNPEFTMCEFYWAYATFEDLMDLTERMFAHIAQQVTGNTVVEYQGQQIDLTPGKW 343

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +   E+      +     +      D        ++ G +V   D    + + +    
Sbjct: 344 ARVPFLESLRTIGGLSPEVYM------DMAKAKALVRERGEKVLESDKLGKVQAMLFDMF 397

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +     +  YP   S L+     DP  T RFEL+    E+ NA  EL DP++QR
Sbjct: 398 VEPK--LVQPHFIYHYPTDISPLSRRNDQDPTITDRFELFMSGREMANAFSELNDPVDQR 455

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF +++QEK+    E + +DED++  L   MP ++G  +G DRLVML+T + +I EVI 
Sbjct: 456 LRFMEQVQEKEAGDEEAHYMDEDYVRALEYGMPPAAGQGIGIDRLVMLLTDSPSIREVIL 515

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 516 FPLLRPE 522


>gi|15677284|ref|NP_274437.1| lysyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|32130177|sp|Q9JYU6|SYK_NEIMB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|7226664|gb|AAF41786.1| lysyl-tRNA synthetase, heat inducible [Neisseria meningitidis MC58]
 gi|316984545|gb|EFV63510.1| lysyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325140370|gb|EGC62891.1| lysyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199958|gb|ADY95413.1| lysyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 503

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKAQVVQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|255743876|ref|ZP_05417832.1| lysyl-tRNA synthetase (class II) [Vibrio cholera CIRS 101]
 gi|262156095|ref|ZP_06029214.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae INDRE 91/1]
 gi|262169963|ref|ZP_06037653.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC27]
 gi|31340515|sp|Q9KU60|SYK_VIBCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|255738507|gb|EET93896.1| lysyl-tRNA synthetase (class II) [Vibrio cholera CIRS 101]
 gi|262021697|gb|EEY40408.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC27]
 gi|262030131|gb|EEY48776.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae INDRE 91/1]
 gi|327483463|gb|AEA77870.1| Lysyl-tRNA synthetase (class II) [Vibrio cholerae LMA3894-4]
          Length = 510

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 166/368 (45%), Gaps = 22/368 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +         +  
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGKYA 324

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y  N      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 325 RMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 443 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 502

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 503 FPAMRPQQ 510


>gi|304396711|ref|ZP_07378591.1| lysyl-tRNA synthetase [Pantoea sp. aB]
 gi|304355507|gb|EFM19874.1| lysyl-tRNA synthetase [Pantoea sp. aB]
          Length = 506

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 164/368 (44%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANEESRNTFKIRSQIMAGIRQFMVGRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V    +  +     +     E
Sbjct: 266 GISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGSTVVPYGEQEFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       AQ   I+V        + + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDLADLEDFDKAVAIAQSLHIKVEKSWGLGRVVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 499 PALRPGSK 506


>gi|268609181|ref|ZP_06142908.1| lysyl-tRNA synthetase, class II [Ruminococcus flavefaciens FD-1]
          Length = 539

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 96/372 (25%), Positives = 161/372 (43%), Gaps = 35/372 (9%)

Query: 6   SQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +    +D    YR+R              +KR+ I +S+R Y     F+E+++  L  +
Sbjct: 177 EKWHGLKDTDTRYRQRYLDLIINPDVKDTFVKRSKIIASIRRYLDNQGFMEVETPMLVSN 236

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
            G     R F T     + + + + L+ S E   K+L+  G E+++     +RN      
Sbjct: 237 AGGAA-ARPFETHY---NALDEEVKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTR 292

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYITVA 171
           H PEFT++E Y+A+  Y  +M    N+ R  A+ V       +     +     E +T+ 
Sbjct: 293 HNPEFTLMELYQAYTDYYGMMDLTENMFRHVAQEVCGTTTVPYGEHMIDLGKPFERLTMI 352

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +A  +Y+ +D        +          A++  +         DI +      +E +  
Sbjct: 353 DAVKKYSGVDFN------EIKTLEEARAAAKEHNVEFEDRHKRGDILNLFFEAYVEEH-- 404

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   T +  +P   S L    P  P + +RFEL+    E+CNA  EL DPI+QR RF+ +
Sbjct: 405 LIQPTFIMDHPVEISPLTKKKPDAPDYVERFELFITGREMCNAYSELNDPIDQRERFKAQ 464

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS-- 348
            +   +   E    DEDFL  L   MP + GI  G DRLVML+T + +I +V+  P    
Sbjct: 465 EEALSQGDEEANRTDEDFLRALEIGMPPTGGIGYGIDRLVMLLTNSPSIRDVLLFPTMKS 524

Query: 349 ------QSNQEE 354
                 +  +EE
Sbjct: 525 LPANSGRPEKEE 536


>gi|52425598|ref|YP_088735.1| lysyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81386871|sp|Q65SB0|SYK_MANSM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52307650|gb|AAU38150.1| LysU protein [Mannheimia succiniciproducens MBEL55E]
          Length = 503

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 163/366 (44%), Gaps = 24/366 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   FIE+++ 
Sbjct: 146 LRPLPDKFHGLSDQETRYRQRYLDLISNEESRRTFVIRSKVIAGIREYFIGKGFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTTIVPYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A + GI +        I + I  E  
Sbjct: 322 RITMHDAVIKYG---AEKGIVKEDLYDLDRAKAAAAKLGIEIQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    D+DF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKDAGDDEAMFKDDDFVTALEHGLPPTAGEGLGIDRLAMLFANAPSIRDVILF 496

Query: 346 PFSQSN 351
           P  +  
Sbjct: 497 PAMKHK 502


>gi|332288941|ref|YP_004419793.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330431837|gb|AEC16896.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 502

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 164/366 (44%), Gaps = 24/366 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   FIE+++ 
Sbjct: 145 LRPLPDKFHGLADQEMRYRQRYLDLISNEESRRTFIIRSKVIAGIREYFIGKGFIEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 205 MLQVIPGGAA-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 261 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTTIVPYGEYEFDFGKPFE 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI +        + + I  E  
Sbjct: 321 RITMHDAVLKYG---ADKGIVKEDLYDFDRAKAVAEKLGIEIQKSWGLGSLVNAIFEEVA 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 378 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 436 RFNAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLFANAESIRDVILF 495

Query: 346 PFSQSN 351
           P  +  
Sbjct: 496 PAMKHK 501


>gi|312964851|ref|ZP_07779091.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312290407|gb|EFR18287.1| lysyl-tRNA synthetase [Escherichia coli 2362-75]
          Length = 505

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 167/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V + F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNSGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V  +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y      +  D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RSETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|309973326|gb|ADO96527.1| Lysyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 502

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|145633058|ref|ZP_01788790.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986284|gb|EDJ92863.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 502

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATVKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|197301309|ref|ZP_03166394.1| hypothetical protein RUMLAC_00040 [Ruminococcus lactaris ATCC
           29176]
 gi|197299627|gb|EDY34142.1| hypothetical protein RUMLAC_00040 [Ruminococcus lactaris ATCC
           29176]
          Length = 693

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 166/365 (45%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I S++R+Y     F+E+++ 
Sbjct: 186 LQMLPEKFHGLTDTDTRYRQRYVDLIMNSDTKDTFIKRSKILSAIRKYLSGKGFMEVETP 245

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + L L+ S E   K+L+  G EK++     +RN 
Sbjct: 246 MLVANAGGAA-ARPFETHF---NALNEDLKLRISLELYLKRLIVGGLEKVYEIGRVFRNE 301

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V       ++ +  +     E
Sbjct: 302 GLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRFVAQEVLGTTHIVYKGIEMDLGKPFE 361

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D        +  D       A++  I         DI +    E +
Sbjct: 362 RITMVDAVKKYAGVDWN------EVKDLEQARAIAKEHNIEFEERHKKGDILNLFFEEYV 415

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 416 EEH--LLQPTFVMDHPIEISPLTKKKPENPEYVERFEFFMNGWEMANAYSELNDPIDQRE 473

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +  +E    DEDF+  L   MP + GI  G DR+ ML+TGA  I +V+  
Sbjct: 474 RFKAQEELLAQGDDEANTTDEDFMNALEIGMPPTGGIGFGIDRMCMLLTGAEAIRDVLLF 533

Query: 346 PFSQS 350
           P  +S
Sbjct: 534 PTMKS 538


>gi|294142344|ref|YP_003558322.1| lysyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293328813|dbj|BAJ03544.1| lysyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 502

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 87/369 (23%), Positives = 163/369 (44%), Gaps = 22/369 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + ++ +F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVVSAIRNFMIKKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHTIPGGAT-ARPFITH---HNALDIEMYLRVAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A          +     +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIATELCGSPKLPYGEHTVDFGGPYA 314

Query: 167 YITVAEAFARYA-NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y  + +   ++   +  D   +   A+  G+++    T   +   I  E 
Sbjct: 315 RLSMLDAIKKYCPDNETIQSMTYEEVKDVEFMRNLAKSIGMKIEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP+  +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPH--LMQPTFITGYPADISPLARRNDENHFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 QRFKAQVAAKDAGDDEAMFYDADYIRALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSNQE 353
            P  +   +
Sbjct: 493 FPAMRPQAQ 501


>gi|197335462|ref|YP_002155208.1| lysyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|226710932|sp|B5F9U5|SYK_VIBFM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|197316952|gb|ACH66399.1| lysyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 501

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 90/367 (24%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + +++R + V+  F+E+++ 
Sbjct: 140 LRPLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFIVRSKVVAAIRNFMVDKGFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 200 MMHVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     ++   A  V       +     +   +  
Sbjct: 256 GLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSTVATSVLGSDKMPYGEHTVDFGGKYA 315

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y  +      L      DR L+   A+   + V    T   +   I  E 
Sbjct: 316 RMSMLDAIKQYNPDHSEIQALTYEGVKDRDLMVSIAKSVHVEVESFWTCGQLLEEIFGET 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 376 AEPK--LMQPTFITEYPADISPLARRNDDNDFITDRFEFFIGGREVANGFSELNDAQDQD 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 434 ERFKAQVNAKESGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 493

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 494 FPSMRPQ 500


>gi|152995161|ref|YP_001339996.1| lysyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|150836085|gb|ABR70061.1| lysyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 500

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 163/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ I S++R +  + +F+E+++ 
Sbjct: 145 LRPLPDKHHGLSDMEMRYRQRYVDLIVNEESRETFQMRSKIISTIRRFLEDRRFMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 205 MLQTIPGGAS-ARPFITH---HNAMDMSMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    +++R  A +V      ++Q    +  +   
Sbjct: 261 GTSTRHNPEFTMIEFYQAYADYKDLMDLTEDMLRTVAEKVLGTTTVTYQGSEYDFGAPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ ++   Y        L   D          A++  I V        +++ I  E  
Sbjct: 321 RMSMLDSILHY-----NPELTAADLETLEGATAVAKKLKIDVKPIWGLGKLWTEIFEETA 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    ++  T +  YPA  S LA     +   T RFE +    E+ N   EL DP +Q  
Sbjct: 376 EHK--LDQPTFITEYPAEVSPLARRNDDNDFITDRFEFFVGGREIANGFSELNDPEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++ EK    +E    D D++  L   +P ++G  +G DRLVML T A +I +V+  
Sbjct: 434 RFMRQVAEKDAGDDEAMHYDADYINALEYGLPPTAGEGIGIDRLVMLFTDAPSIRDVLLF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMKPQ 499


>gi|116074402|ref|ZP_01471664.1| lysyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116069707|gb|EAU75459.1| lysyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 497

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 154/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  + S +R +  E  F+EI++ 
Sbjct: 138 LQPLPDKWHGLADVEKRYRQRYLDLVVSPDTRETFRRRARLVSGIRRWLDERDFLEIETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +  PL L+ + E   K+L+  G E+++     +RN 
Sbjct: 198 VLQSEPGGA-DARPFETH---HNALDLPLTLRIATELHLKRLVVGGFERVYELGRIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M+    ++     EV      ++Q    +      
Sbjct: 254 GVSTRHNPEFTSVEIYQAYSDYIGMMELTEQMVAAVCQEVCGSTKITYQGTEVDLTPPWR 313

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ E       +D           D     + A+   +    D +   + +    + +
Sbjct: 314 RATMHELVEDATGLDFN----GFSSRDEAAAAMTAKGLHVPELAD-SVGRLLNEAFEQAV 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL+DP++QR 
Sbjct: 369 EST--LIQPTFVTDYPVEISPLARPHRSKPGLVERFELFIVGREHANAFSELIDPVDQRQ 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R E +   K     E   +DEDF+  L   MP + G+ +G DRLVML+T + +I +VI  
Sbjct: 427 RLEAQQARKAAGDLEAQGLDEDFVNALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PLLRPE 492


>gi|304387240|ref|ZP_07369437.1| lysine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304338728|gb|EFM04841.1| lysine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|325128487|gb|EGC51366.1| lysyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 503

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIIDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|123969360|ref|YP_001010218.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|123199470|gb|ABM71111.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 488

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 161/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R    S +R++     F+EI++ 
Sbjct: 127 LQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNVFKTRAKCISFIRKWLDNRNFLEIETP 186

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+++  G EK++     +RN 
Sbjct: 187 ILQSEAGGA-EARPFITH---HNTLDIPLYLRIATELHLKRMVVGGFEKVYELGRIFRNE 242

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA-AEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M     +I+   A+     I ++QN   +      
Sbjct: 243 GISTRHNPEFTSVEIYEAYSDYVDMMNLTEELIKDIVADACGSLIINYQNKEIDFSKPWS 302

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
            I++     +Y  ID  +        D        +   +  ++  +T   + + +  +K
Sbjct: 303 RISMKAIVKKYTGIDFDSFSG-----DFLAAKQAVKNINVDCSNKVNTMGRLLNEVFEQK 357

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  +  + +  +RFEL+    EL NA  EL+DP++QR
Sbjct: 358 VESK--LVEPTFVIDYPVEISPLARPHHDNKQIVQRFELFIVGRELANAFSELIDPVDQR 415

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R + +   + +   E + IDEDFL  L   MP + G+ +G DRL+ML+T + +I +VI 
Sbjct: 416 ERMQLQQSLRDEGDLEAHCIDEDFLNALEIGMPPTGGLGIGIDRLIMLITNSASIRDVIP 475

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 476 FPLLKPE 482


>gi|332880622|ref|ZP_08448296.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681610|gb|EGJ54533.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 597

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 98/375 (26%), Positives = 154/375 (41%), Gaps = 35/375 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR+ I  +LR    E  
Sbjct: 143 LKPLPIVKMKDGEVYDSFDDPELRYRQRYVDLIVNSGVKETFLKRSAILKTLRAALDEAG 202

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ  PG  +  R F T     + +   LYL+ + E   K+L+  G E ++  
Sbjct: 203 YTEVETPILQSIPGGAS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEI 258

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     ++       N    S  +    
Sbjct: 259 GKNFRNEGMDKSHNPEFTCMELYVQYKDYNWMMAFTEKLLERICIAVNGSTESVVDGKTI 318

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            F      + + EA       DL              +    +   + +        +  
Sbjct: 319 SFKAPYRRLPILEAIKEKTGYDLNG-------KSEEEIREICKALNLEIDDTMGKGKLID 371

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L   + ++P  T+RFEL     EL NA  EL 
Sbjct: 372 EIFGEFCEGTY--IQPTFITDYPVEMSPLTKKHRSNPALTERFELMVNGKELANAYSELN 429

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF ++M+  +K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 430 DPIDQEERFIEQMRLSEKGDDEAMFIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQTT 489

Query: 339 INEVIWTPFSQSNQE 353
           I EV++ P  +  ++
Sbjct: 490 IQEVLFFPQMRPEKK 504


>gi|148826181|ref|YP_001290934.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229559858|sp|A5UCQ0|SYK_HAEIE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148716341|gb|ABQ98551.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 502

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 168/364 (46%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  + ++  +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATVKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|291618680|ref|YP_003521422.1| LysS [Pantoea ananatis LMG 20103]
 gi|291153710|gb|ADD78294.1| LysS [Pantoea ananatis LMG 20103]
 gi|327395060|dbj|BAK12482.1| lysyl-tRNA synthetase LysS [Pantoea ananatis AJ13355]
          Length = 506

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 165/368 (44%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKIRSQIMAGIRQFMVGRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +    +  +     +     E
Sbjct: 266 GISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGSTVVPYGEQEFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       AQ  GI+V        + + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDLADLDDFDKAVAIAQTIGIKVEKSWGLGRVVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAQDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 499 PALRPGSK 506


>gi|269140267|ref|YP_003296968.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267985928|gb|ACY85757.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304560095|gb|ADM42759.1| Lysyl-tRNA synthetase class II [Edwardsiella tarda FL6-60]
          Length = 505

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 161/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I +++R + V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLSDQETRYRQRYLDLIANESSRETFRTRSKILAAIRNFMVNKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R  ++ V    +  + +   +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTISQDVLGSSVVQYGDQTFDFGKPFI 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA   Y        + + D  D       A+  GI++        +   I  E  
Sbjct: 326 KMSMKEAICHY-----RPDIASADLDDMEKACKIAESLGIKIEKSWGLGRVQCEIFDETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESQ--LIQPTFITEYPAEVSPLARRNDENPFITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++ K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFLDQVKAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGVGIDRMMMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|261378958|ref|ZP_05983531.1| lysine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269144660|gb|EEZ71078.1| lysine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 503

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVNEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     S+     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRAVNGTAKISYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+  A  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILGAIKKY-----NPHYTDEQLNDEEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|307165837|gb|EFN60200.1| Lysyl-tRNA synthetase [Camponotus floridanus]
          Length = 585

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 159/373 (42%), Gaps = 26/373 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +  +D    +R+R                R  I + +R++     F+E+++ 
Sbjct: 199 LHMLPHLHYGLKDRETRFRQRYLDLILNDKVRRIFHIRARIIAYIRKFLDNMGFLEVETP 258

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + + K LY++ +PE   K L+  G ++++     +RN 
Sbjct: 259 MMNMIPGGAT-AKPFITH---HNELNKDLYMRIAPELYLKMLVVGGLDRVYEIGRQFRNE 314

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN------CNP 161
                H PEFT  E+Y A+  Y  LM+   N+I    +  +       N N       + 
Sbjct: 315 GIDLTHNPEFTTCEFYIAYADYNDLMEITENMISGMVKAIHGSWKIEYNTNEGSTLTLDF 374

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
               + I++ E   R  ++ L             +L        I      T + +  ++
Sbjct: 375 TPPFKRISMMEELERILDVKLPAADQLNIPEANKILSDLCDHHKIECPPPKTSARLLDKL 434

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           +   IE +  I   T +  +P   S LA  + +    T+RFEL+    E+CNA  EL DP
Sbjct: 435 VGSFIEDS--IINPTFIIDHPQVMSPLAKWHRSKKGLTERFELFVGTKEICNAYTELNDP 492

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
             QR RFE++  +K     E   +DE F   L   +P ++G  +G DRL M +T  NNI 
Sbjct: 493 FIQRERFEQQAMDKAAGDEEAQLVDETFCTALEYGLPPTAGWGLGIDRLTMFLTDTNNIK 552

Query: 341 EVIWTPFSQSNQE 353
           EV+  P  + ++ 
Sbjct: 553 EVLLFPHMKPDEN 565


>gi|284008433|emb|CBA74887.1| lysyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 504

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 158/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S+LR + V   F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQETRYRQRYLDLIANDRSRQTFITRSRVLSALRNFMVSKDFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MMQVIPGGAA-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R   + V       +     +      
Sbjct: 265 GISPRHNPEFTMMELYMAYADYKDLIVLTEELFRTVTQEVLGTTQVKYGEHLFDFGQPFS 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y            D  D       A+   I          +   I     
Sbjct: 325 KMTMKEAIVKY-----RAETVLADLDDMTKATAIAKSLNIEPEKGWGLGRLQCEIFEAVA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 380 ESH--LIQPTFITEYPAEVSPLARRNDNNPFITDRFEFFIGGREIGNGFSELNDAEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++K +  +E    DED++  L   +P ++G+ +G DR++ML+T ++ I +VI  
Sbjct: 438 RFAQQVRQKDEGDDEAMFYDEDYITALEHGLPPTAGLGIGIDRMIMLLTDSHTIRDVILF 497

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 498 PALRPGK 504


>gi|145635060|ref|ZP_01790766.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267668|gb|EDK07666.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 502

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 168/364 (46%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  + ++  +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATVKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|254805207|ref|YP_003083428.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254668749|emb|CBA06609.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 503

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|325130491|gb|EGC53248.1| lysyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 503

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANGESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     S+     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|309751146|gb|ADO81130.1| Lysyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 502

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|330997598|ref|ZP_08321444.1| lysine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329570309|gb|EGG52044.1| lysine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 575

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 152/375 (40%), Gaps = 35/375 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR+ I  +LR    E  
Sbjct: 143 LRPLPIVKMKDGEVYDSFDDPELRYRQRYVDLIVNSGVKETFLKRSAILKTLRAALDEAG 202

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ  PG  +  R F T     + +   LYL+ + E   K+L+  G E ++  
Sbjct: 203 YTEVETPILQSIPGGAS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEI 258

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNC 159
              +RN      H PEFT +E Y  ++ Y  +M     ++                    
Sbjct: 259 GKNFRNEGMDKSHNPEFTCMELYVQYKDYNWMMAFTEKLLERICIAVNGGTESVVDGKTI 318

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    + + EA       DL              +    +   + +        +  
Sbjct: 319 SFKAPYRRLPILEAIKEKTGYDLNG-------KSEEEIREICKTLNLEIDDTMGKGKLID 371

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L   + ++P  T+RFEL     EL NA  EL 
Sbjct: 372 EIFGEFCEGTY--IQPTFITDYPVEMSPLTKKHRSNPALTERFELMVNGKELANAYSELN 429

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF ++M+  +K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 430 DPIDQEERFIEQMRLSEKGDDEAMFIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQTT 489

Query: 339 INEVIWTPFSQSNQE 353
           I EV++ P  +  ++
Sbjct: 490 IQEVLFFPQMRPEKK 504


>gi|254284100|ref|ZP_04959068.1| lysyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219680303|gb|EED36652.1| lysyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 496

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 146/366 (39%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+   + +R +  +  F+E+++ 
Sbjct: 142 LRPLPDKYHGLADQELRYRQRYVDLIANPEVRDIFRVRSETINFIRRFLNDRGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   +YL+ +PE   K+L   G EK++     +RN 
Sbjct: 202 MMHPIPGGAA-AKPFVTH---HNALDMDMYLRIAPELYLKRLTVGGFEKVYEVNRNFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y   M     ++R   + V      ++     +      
Sbjct: 258 GLSTRHNPEFTMLEYYWAYADYRDAMDMTEQLLRELTQSVLGDTCVTYGEEQFDFGKPFA 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV EA   +        +      D       A   GI +        +   I     
Sbjct: 318 RMTVVEAILHF-----NPDISLEAVADPDAARRLASDLGIALKPSWGLGKVQIEIFEATA 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFE +    E+ N   EL D  +Q  
Sbjct: 373 EHR--LQQPTFITAYPTEVSPLARRNDDDPFVTDRFEFFVGGREIANGFSELNDAEDQAE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK+    E    D D++  L   MP ++G  +G DRLVML+T + +I +V+  
Sbjct: 431 RFRAQVAEKEAGDEEAMHYDHDYVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLF 490

Query: 346 PFSQSN 351
           P  +  
Sbjct: 491 PHMRPE 496


>gi|260599229|ref|YP_003211800.1| lysyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260218406|emb|CBA33489.1| Lysyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 505

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLIANDESRKTFKARSQILAGIRQFMVGRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       +     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQEVLGTTQVPYGEETFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       AQ  GI++        + + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDDFEKAKGIAQAVGIKIEKSWGLGRVVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|224024193|ref|ZP_03642559.1| hypothetical protein BACCOPRO_00916 [Bacteroides coprophilus DSM
           18228]
 gi|224017415|gb|EEF75427.1| hypothetical protein BACCOPRO_00916 [Bacteroides coprophilus DSM
           18228]
          Length = 575

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 105/374 (28%), Positives = 166/374 (44%), Gaps = 35/374 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKRN + +S+REYF    
Sbjct: 143 IRPLPIVKYKDGVAYDKFEDPELRYRQRYVDLVVNDGVKDIFLKRNKVYNSMREYFNSKG 202

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           +IE+++  LQ   G     R F T     + +  PLY++ + E   K+L+  G E ++  
Sbjct: 203 YIEVETPILQSIAGGAA-ARPFITH---HNALDIPLYMRIASELYLKRLIVGGFEGVYEI 258

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y A++ Y  +MK   N+I       N         N  
Sbjct: 259 GKNFRNEGMDRTHNPEFTCMEIYVAYKDYNWMMKFTENMIEKICMDVNGTTEVKVGDNII 318

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            F    + +T+ ++   +   DL          +   +    Q+  + +        +  
Sbjct: 319 NFKAPFKRVTMLDSIKEFTGYDLTGM-------NEEQIREVCQKLNMEIDDTMGKGKLID 371

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E N      T +  YP   S L   +  +P  T+RFEL     ELCNA  EL 
Sbjct: 372 EIFGEFCEGNY--IQPTFITDYPIEMSPLTKRHRNNPELTERFELMVNGKELCNAYSELN 429

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RFE++M+  +K  +E   ID+DF+  L   MP +SG+ +G DRLVML+TG + 
Sbjct: 430 DPIDQLERFEEQMRLSEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLVMLMTGQST 489

Query: 339 INEVIWTPFSQSNQ 352
           I EV++ P  +  +
Sbjct: 490 IQEVLFFPQMRPEK 503


>gi|145637034|ref|ZP_01792697.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145269688|gb|EDK09628.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 502

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 169/364 (46%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  + ++  +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D +     A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFNRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|15640683|ref|NP_230313.1| lysyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587863|ref|ZP_01677620.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 2740-80]
 gi|121728407|ref|ZP_01681435.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V52]
 gi|147674731|ref|YP_001216158.1| lysyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153216961|ref|ZP_01950725.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 1587]
 gi|153801992|ref|ZP_01956578.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-3]
 gi|153818684|ref|ZP_01971351.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae NCTC 8457]
 gi|153826526|ref|ZP_01979193.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-2]
 gi|153829165|ref|ZP_01981832.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 623-39]
 gi|227080845|ref|YP_002809396.1| heat inducible lysyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505714|ref|ZP_04395224.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae BX 330286]
 gi|229508712|ref|ZP_04398205.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae B33]
 gi|229512925|ref|ZP_04402392.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TMA 21]
 gi|229519539|ref|ZP_04408982.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC9]
 gi|229520955|ref|ZP_04410377.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TM 11079-80]
 gi|229530471|ref|ZP_04419859.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae 12129(1)]
 gi|229608733|ref|YP_002879381.1| lysyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254226528|ref|ZP_04920111.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V51]
 gi|254291903|ref|ZP_04962685.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae AM-19226]
 gi|254850995|ref|ZP_05240345.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|9655101|gb|AAF93829.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121547899|gb|EAX57983.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 2740-80]
 gi|121629341|gb|EAX61773.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V52]
 gi|124114026|gb|EAY32846.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 1587]
 gi|124122451|gb|EAY41194.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-3]
 gi|125620932|gb|EAZ49283.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae V51]
 gi|126510764|gb|EAZ73358.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae NCTC 8457]
 gi|146316614|gb|ABQ21153.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae O395]
 gi|148875354|gb|EDL73489.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae 623-39]
 gi|149739706|gb|EDM53913.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae MZO-2]
 gi|150422189|gb|EDN14154.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae AM-19226]
 gi|227008733|gb|ACP04945.1| heat inducible lysyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227012489|gb|ACP08699.1| heat inducible lysyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229332244|gb|EEN97732.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae 12129(1)]
 gi|229342188|gb|EEO07184.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TM 11079-80]
 gi|229344228|gb|EEO09203.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae RC9]
 gi|229350174|gb|EEO15127.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae TMA 21]
 gi|229354236|gb|EEO19166.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae B33]
 gi|229357937|gb|EEO22854.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae BX 330286]
 gi|229371388|gb|ACQ61811.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae MJ-1236]
 gi|254846700|gb|EET25114.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
          Length = 512

 Score =  338 bits (868), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 166/368 (45%), Gaps = 22/368 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 151 LRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 211 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +         +  
Sbjct: 267 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGKYA 326

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y  N      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 327 RMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGET 386

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 387 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 444

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 445 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 504

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 505 FPAMRPQQ 512


>gi|325662822|ref|ZP_08151391.1| hypothetical protein HMPREF0490_02131 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470874|gb|EGC74103.1| hypothetical protein HMPREF0490_02131 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 649

 Score =  338 bits (868), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I S++R+Y     F+E+++ 
Sbjct: 141 LQILPEKFHGLTNTDLRYRQRYVDLIMNPDVKDTFIKRSKILSAIRKYLDGQGFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G E+++     +RN 
Sbjct: 201 ILVSNAGGAA-ARPFETHF---NALNEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V      ++  V  +     E
Sbjct: 257 GLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRFVAQEVLGTTKITYGGVEMDLGKPFE 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y  ID        +          A++  +         DI S      +
Sbjct: 317 RITMVDAVKKYTGIDWN------EVTTLKEARRLAKEHKVEFEERHKKGDILSLFFEAFV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFE +    E+ NA  EL DPI+QR 
Sbjct: 371 EEH--LIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELNDPIDQRA 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDFL  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 429 RFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLF 488

Query: 346 PFSQS 350
           P  +S
Sbjct: 489 PTMKS 493


>gi|157148426|ref|YP_001455745.1| lysyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166229805|sp|A8AP96|SYK_CITK8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157085631|gb|ABV15309.1| hypothetical protein CKO_04251 [Citrobacter koseri ATCC BAA-895]
          Length = 505

 Score =  338 bits (868), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQIMAGIRQFMVGRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +    + +   +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVPYGDEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVNAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|148244696|ref|YP_001219390.1| lysyl-tRNA synthetase, class II [Candidatus Vesicomyosocius
           okutanii HA]
 gi|259511539|sp|A5CWL4|SYK_VESOH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146326523|dbj|BAF61666.1| lysyl-tRNA synthetase, class II [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 496

 Score =  338 bits (868), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 99/368 (26%), Positives = 169/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               +R+ I + +R +F  + FIE+++ 
Sbjct: 141 LRPLPGKFHGLSDQEIRYRQRYVDLIMNKTSRNTFKRRSQIINYIRNFFNHHDFIEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  + F T     + +  P+Y + SPE   K+L+  G  K+F     +RN 
Sbjct: 201 MLQTIPGGAT-AKPFET---YHNALDMPMYFRISPELYLKRLIIGGMNKVFEINRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ +Y  LM     + R  A +V       +Q  N + F   +
Sbjct: 257 GLSTRHNPEFTMIEFYQAYGTYHDLMNLTEKLFRSIALDVCGSANVYYQGNNLDFFKSFK 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I+V ++  +Y               ++      A++ GI++  +     I   I    +
Sbjct: 317 RISVVDSILQY------NPSLIATDLNQKNAKQTAEKLGIQIKENWGLGKIQIEIFETTV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 371 EEK--LLQPTFITEYPTEVSPLARRNDDNPFITDRFELFISGCEIANGFSELNDAQDQAE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+K+++EK    +E+   D D++  L   MP ++G  +G DRLVML T + +I +VI  
Sbjct: 429 RFKKQVEEKDLGNDESMYYDADYIRALEYGMPPTAGEGIGIDRLVMLFTDSPSIRDVILF 488

Query: 346 PFSQSNQE 353
           P  ++  +
Sbjct: 489 PHMRAEVK 496


>gi|283788452|ref|YP_003368317.1| lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282951906|emb|CBG91624.1| lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 505

 Score =  338 bits (868), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKIRSQILAGIRQFMVGRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       + +   +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTQVPYGDEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  +  +       A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMAELDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|72383033|ref|YP_292388.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|72002883|gb|AAZ58685.1| lysyl-tRNA synthetase, class-2 [Prochlorococcus marinus str.
           NATL2A]
          Length = 513

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 155/367 (42%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R ++ SS+R +  E  F+EI++ 
Sbjct: 150 LQPLPDKWHGLADVEKRYRQRYLDLIVNPQSRKTFRTRALLVSSIRRWLDEKDFLEIETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+L+  G ++++     +RN 
Sbjct: 210 VLQSEAGGA-DARPFITH---HNTLDLPLYLRIATELHLKRLVVGGFQRVYELGRIFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A   Y  +M     ++     ++      ++Q    +      
Sbjct: 266 GISTRHNPEFTSVEIYEAFADYFDMMDLTEKLLSSVCEKICGSTKINYQEQEIDLQPPWR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
             T+ +    +  ID     DN D     +        G++V    DT   + +    + 
Sbjct: 326 RATMHDLVKEFTGIDFELFGDNVDDAKAEMSRE-----GLQVPDKADTVGSLLNEAFEQA 380

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP   S LA  +       +RFEL+    E  NA  EL+DPI+QR
Sbjct: 381 VEPE--LIQPTFVMDYPIEISPLARKHRTKKGLVERFELFIVGRETANAFSELIDPIDQR 438

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R   +  +K+    E   +DEDF+  L   MP + G+ +G DR VML+T + +I +VI 
Sbjct: 439 ERLLLQQAKKEAGDLEAQSLDEDFINALEVGMPPTGGLGIGIDRFVMLLTDSPSIRDVIA 498

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 499 FPLLRPE 505


>gi|124021897|ref|YP_001016204.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166229815|sp|A2C629|SYK_PROM3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123962183|gb|ABM76939.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 508

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 161/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R ++ S++R +  +  F+EI++ 
Sbjct: 151 LQPLPDKWHGLADVEKRYRQRYLDLIVSPQSRETFRRRALMVSAIRRWLDDRAFLEIETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+L+  G E+++     +RN 
Sbjct: 211 VLQAEAGGA-EARPFITH---HNTLDLPLYLRIATELHLKRLVVGGFERVYELGRIFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +I     ++      ++Q +  +      
Sbjct: 267 GMSTRHNPEFTSVEVYQAYADYIDMMVLTEQLISSVCTQICGSTRITYQGIEIDLTPPWR 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
             ++ E       +D           DR +      +AG+ V    D+   + +    + 
Sbjct: 327 RASMHELVQEATGLD------FMGFADRAVAASAMARAGLEVPSKADSVGRLLNEAFEQA 380

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E  + +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL+DP++QR
Sbjct: 381 VE--VSLIQPTFVLDYPIEISPLARQHRSKPGLVERFELFIVGRETANAFSELIDPLDQR 438

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   ++    E + +DEDFL  L   MP + G+ +G DRLVML T + +I +VI 
Sbjct: 439 QRLEAQQARRQAGDLEAHGVDEDFLQALEVGMPPTGGLGIGIDRLVMLFTDSPSIRDVIA 498

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 499 FPLLRPE 505


>gi|86142116|ref|ZP_01060640.1| lysyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831679|gb|EAQ50135.1| lysyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 564

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 169/379 (44%), Gaps = 37/379 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  + +++R +F + 
Sbjct: 136 LKPLPLPKVDKDGNEFDKFNDPEMRYRQRYADLVVNPKVKDVFVKRTKLFAAMRNFFNDK 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            + E+++  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 196 GYFEVETPILQSIPGGAA-ARPFVTH---HNALDIPLYLRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M     ++   A         +F    
Sbjct: 252 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMAFTEKLLEHCATAVNGTTEATFGEHK 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +  + +T+ +A  ++   D+              L   A   G+ V        + 
Sbjct: 312 VDFKAPYKRVTMTDAIKQFTGFDITG-------KSEAELREAALGMGLEVDETMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGEKCEGN--FIQPTFITDYPKEMSPLCKEHRENPELTERFELMVCGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPI+QR RFE++++   K  +E    ID+DFL  L   MP +SG+ +G DRL+M +T  
Sbjct: 423 NDPIDQRERFEEQLKLAAKGDDEATEFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNN 482

Query: 337 NNINEVIWTPFSQSNQEEI 355
            +I EV++ P  +  ++++
Sbjct: 483 QSIQEVLFFPQMKPERKKV 501


>gi|260914425|ref|ZP_05920894.1| lysine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631526|gb|EEX49708.1| lysine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 501

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 99/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +R+YF+   F+E+++ 
Sbjct: 145 LRPLPDKFHGLSDQETRYRQRYLDLISNEESRRTFIIRSKVIAGIRDYFISKGFMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 205 MLQIIPGGAS-ARPFITH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 261 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVPYGEYEFDFGKPFE 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        + + I  E  
Sbjct: 321 RITMHDAILKYG---ADKGIVKEDLYDFDRAVTVAEKLGIEVQKSWGLGSLVNVIFEEVA 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 378 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 436 RFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPTAGEGLGIDRLAMLFANAASIRDVILF 495

Query: 346 PFSQ 349
           P  +
Sbjct: 496 PAMK 499


>gi|259909550|ref|YP_002649906.1| lysyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224965172|emb|CAX56704.1| Lysyl tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283479627|emb|CAY75543.1| lysyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163]
          Length = 506

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 163/368 (44%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R + V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDDSRKTFKIRSQIMAGIRNFMVGRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MMQAIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V    +  + +   +      
Sbjct: 266 GISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGSTVVPYGDQQFDFGKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       AQ  GI V        + + I  E  
Sbjct: 326 QLTMKEAILKY-----RPQTDLADLADFEKSVAIAQSLGINVEKSWGLGRLVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     DP  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVDPEITDRFEFFIGGREIGNGFSELNDAQDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGVGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 499 PALRPGSK 506


>gi|225572779|ref|ZP_03781534.1| hypothetical protein RUMHYD_00970 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039836|gb|EEG50082.1| hypothetical protein RUMHYD_00970 [Blautia hydrogenotrophica DSM
           10507]
          Length = 651

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I SS+R+Y     F+E+++ 
Sbjct: 143 LQVLPEKYHGLTNTDLRYRQRYTDLIMNPEVKDTFIKRSKIISSIRKYLDAQGFMEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G E+++     +RN 
Sbjct: 203 MLVANAGGAA-ARPFETHF---NALDEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V      ++  +  +     E
Sbjct: 259 GLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRHVAQEVLGTTKITYNGIEMDLGKPFE 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y+ +D                   A++  +         DI S    E  
Sbjct: 319 RITMVDAVKKYSGVDFNEIHT------LKEARAVAKEHHVEYEERHKKGDILSLFFEEFA 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFE +    E+ NA  EL DPI+QR 
Sbjct: 373 EEH--LIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELNDPIDQRE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +   +   E    DEDFL  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 431 RFLAQEELLAQGDEEANHTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLF 490

Query: 346 PFSQSN 351
           P  +S 
Sbjct: 491 PTMKSQ 496


>gi|149192199|ref|ZP_01870416.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148833957|gb|EDL50977.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 505

 Score =  338 bits (868), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 160/368 (43%), Gaps = 22/368 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + SS+R +     ++E+++ 
Sbjct: 144 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFIVRSKLVSSIRNFMSSKGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 204 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFDRVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++   A  V       + +       +  
Sbjct: 260 GLSPRHNPEFTMMEFYQAYADYKDLMDLTEEMLSTVAMDVLGSTSMPYGDETVEFGGKYA 319

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y    +    L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 320 RMSMFDAIKHYNPEHEQIQALTEEDLTNRELMVSIAKSVHVEVETFWTCGQLLEEIFGET 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 380 AEPK--LIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRL ML T  + I +VI 
Sbjct: 438 ARFKAQVDAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVIL 497

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 498 FPAMRPQQ 505


>gi|22127148|ref|NP_670571.1| lysyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45443319|ref|NP_994858.1| lysyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51597474|ref|YP_071665.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108806378|ref|YP_650294.1| lysyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108813247|ref|YP_649014.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145597934|ref|YP_001162010.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|150260101|ref|ZP_01916829.1| lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153947369|ref|YP_001399867.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162420680|ref|YP_001608157.1| lysyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165924940|ref|ZP_02220772.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165937386|ref|ZP_02225950.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010379|ref|ZP_02231277.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166212829|ref|ZP_02238864.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399819|ref|ZP_02305337.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167418755|ref|ZP_02310508.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425298|ref|ZP_02317051.1| lysyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170023173|ref|YP_001719678.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186896594|ref|YP_001873706.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218928061|ref|YP_002345936.1| lysyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229837574|ref|ZP_04457736.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229840797|ref|ZP_04460956.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842644|ref|ZP_04462799.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229903703|ref|ZP_04518816.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270487482|ref|ZP_06204556.1| lysine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294502945|ref|YP_003567007.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|32130174|sp|Q8ZHK5|SYK_YERPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81638631|sp|Q666T3|SYK_YERPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|122979986|sp|Q1CF16|SYK_YERPN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123072973|sp|Q1CB23|SYK_YERPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230602|sp|A4TIC5|SYK_YERPP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166980072|sp|A7FF39|SYK_YERP3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710933|sp|A9R4M4|SYK_YERPG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238688479|sp|B1JPH6|SYK_YERPY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238691348|sp|B2K0N6|SYK_YERPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21960209|gb|AAM86822.1|AE013928_7 lysine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45438188|gb|AAS63735.1| lysyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51590756|emb|CAH22401.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108776895|gb|ABG19414.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108778291|gb|ABG12349.1| lysyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115346672|emb|CAL19555.1| lysyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145209630|gb|ABP39037.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149289509|gb|EDM39586.1| lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152958864|gb|ABS46325.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162353495|gb|ABX87443.1| lysyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165914860|gb|EDR33473.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923140|gb|EDR40291.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990865|gb|EDR43166.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166206121|gb|EDR50601.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962749|gb|EDR58770.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050527|gb|EDR61935.1| lysyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055698|gb|EDR65482.1| lysyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169749707|gb|ACA67225.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186699620|gb|ACC90249.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229679473|gb|EEO75576.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229690954|gb|EEO83008.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229697163|gb|EEO87210.1| lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704262|gb|EEO91273.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262360980|gb|ACY57701.1| lysyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262364920|gb|ACY61477.1| lysyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270335986|gb|EFA46763.1| lysine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294353404|gb|ADE63745.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320014036|gb|ADV97607.1| lysyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 505

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 159/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFKVRSQVMSGIRSFMVEKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R     +    +  +     +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTETILGSSVVQYGEQTFDFGKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  GI+V        I   I  E  
Sbjct: 326 KLTMKEAICKY-----RPETNVADLDDMDKAVAIAESLGIKVEKSWGLGRIQCEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQVSAKEAGDDEAMFYDEDYITALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|262172259|ref|ZP_06039937.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus MB-451]
 gi|261893335|gb|EEY39321.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus MB-451]
          Length = 510

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 166/368 (45%), Gaps = 22/368 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFVVRSKVMSAIRNFMISKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +         +  
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGKYA 324

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y  N      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 325 RMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 443 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 502

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 503 FPAMRPQQ 510


>gi|326336335|ref|ZP_08202506.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691509|gb|EGD33477.1| lysine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 560

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 111/378 (29%), Positives = 175/378 (46%), Gaps = 36/378 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR R              LKRN + +++REYF  +
Sbjct: 134 LRPLPLPKVDAQGKVHDEFNDVEQRYRMRYVDLVVNPQVKEVFLKRNRLFNAMREYFNNH 193

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            +IE+++  LQ  PG  +  R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 194 GYIEVETPILQAIPGGAS-ARPFITH---HNALDIPLYMRIANELYLKRLIVGGFDGVYE 249

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVN 158
           FA  +RN      H PEFT +E Y A++ Y  +M+   N++   A+  N     +F    
Sbjct: 250 FAKNFRNEGMDRTHNPEFTGMEIYVAYKDYNWMMEFTENLLEYCAKAVNGTTKATFGKHE 309

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    +T+ EA  R+   D+    +N        L   AQ  GI V        + 
Sbjct: 310 VDFKAPYPRVTMTEAIKRFTGFDITGKSENE-------LRAFAQSIGIEVDDTMGKGKLI 362

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  D   T+RFEL  C  E+ NA  EL
Sbjct: 363 DEIFGEKCEGN--FIQPTFITDYPKEMSPLTKEHRNDKNLTERFELMVCGKEIANAYSEL 420

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE +M   ++  +E   ID+DFL  L   MP +SG+ +G DRL+M +T   
Sbjct: 421 NDPIDQRERFEAQMILSERGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNNE 480

Query: 338 NINEVIWTPFSQSNQEEI 355
            I EV++ P  +  ++E+
Sbjct: 481 TIQEVLFFPQMRPERKEV 498


>gi|258624705|ref|ZP_05719639.1| lysyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258582992|gb|EEW07807.1| lysyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 512

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 166/368 (45%), Gaps = 22/368 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 151 LRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 211 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +         +  
Sbjct: 267 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGKYV 326

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y  N      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 327 RMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGET 386

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 387 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 444

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 445 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 504

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 505 FPAMRPQQ 512


>gi|145639268|ref|ZP_01794874.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145271571|gb|EDK11482.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
          Length = 502

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVTAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|332160510|ref|YP_004297087.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664740|gb|ADZ41384.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330863445|emb|CBX73564.1| lysyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 505

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 160/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQVMSGIRRFMVEKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R     V    +  + +   +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIALTEELFRTLTETVLGSSVVQYGDQTFDFGKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  GI+V        +   I  E  
Sbjct: 326 KLTMKEAICKY-----RPETNVADLDDMDKAVAIAESLGIKVEKSWGLGRVQCEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|283835351|ref|ZP_06355092.1| lysine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291068516|gb|EFE06625.1| lysine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 505

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 163/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQIMAGIRQFMVGRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       +     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTTEVPYGEEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  +       A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIQKY-----RPETNMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|310766542|gb|ADP11492.1| lysyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 506

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 163/368 (44%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R + V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDDSRKTFKIRSQIMAGIRNFMVGRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MMQAIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V    +  + +   +      
Sbjct: 266 GISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGSTVVPYGDQQFDFGKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       AQ  GI V        + + I  E  
Sbjct: 326 QLTMKEAILKY-----RPQTDLADLADFEKSVAIAQSLGINVEKSWGLGRLVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     DP  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVDPEITDRFEFFIGGREIGNGFSELNDAQDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGVGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 499 PALRPGSK 506


>gi|238754560|ref|ZP_04615914.1| Lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238707191|gb|EEP99554.1| Lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 505

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 91/367 (24%), Positives = 162/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R++ VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSRVMSGIRQFMVEKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R     +    +  +     +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTETILGSSVVKYGEQEFDFGKPFT 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  GI++        +   I  E  
Sbjct: 326 KLTMKEAICKY-----RPETNVADLDDMDKAVAIAESLGIKIEKSWGLGRVQCEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++ K +  +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFAEQVRAKDEGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|189459667|ref|ZP_03008452.1| hypothetical protein BACCOP_00295 [Bacteroides coprocola DSM 17136]
 gi|189433626|gb|EDV02611.1| hypothetical protein BACCOP_00295 [Bacteroides coprocola DSM 17136]
          Length = 580

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 105/374 (28%), Positives = 166/374 (44%), Gaps = 35/374 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKRN + +S+REYF    
Sbjct: 147 IRPLPIVKYKDGVAYDKFDDPELRYRQRYVDLVVNDGVKDIFLKRNKVYNSMREYFNSKG 206

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           +IE+++  LQ   G     R F T     + +  PLY++ + E   K+L+  G E ++  
Sbjct: 207 YIEVETPILQSIAGGAA-ARPFITH---HNALDIPLYMRIASELYLKRLIVGGFEGVYEI 262

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y A++ Y  +MK   N+I       N         N  
Sbjct: 263 GKNFRNEGMDRTHNPEFTCMEIYVAYKDYNWMMKFTENMIEKICMDVNGTTEVKVGDNII 322

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            F    + +T+ ++   +   DL          +   +    Q+  + +        +  
Sbjct: 323 NFKAPFKRVTMLDSIKEFTGYDLTGM-------NEEQIREVCQKLNMEIDDTMGKGKLID 375

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E N      T +  YP   S L   +  +P  T+RFEL     ELCNA  EL 
Sbjct: 376 EIFGEFCEGNY--IQPTFITDYPIEMSPLTKRHRNNPDLTERFELMVNGKELCNAYSELN 433

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RFE++M+  +K  +E   ID+DF+  L   MP +SG+ +G DRLVML+TG + 
Sbjct: 434 DPIDQLERFEEQMRLSEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLVMLMTGQST 493

Query: 339 INEVIWTPFSQSNQ 352
           I EV++ P  +  +
Sbjct: 494 IQEVLFFPQMRPEK 507


>gi|229846241|ref|ZP_04466353.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229811245|gb|EEP46962.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 502

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 168/364 (46%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEARYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  + ++  +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATVKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LVQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|312130493|ref|YP_003997833.1| lysyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311907039|gb|ADQ17480.1| lysyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 567

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 97/376 (25%), Positives = 173/376 (46%), Gaps = 36/376 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  +R+R              +KR  I  ++R+ F   
Sbjct: 140 LKPLPVVKRDEQGNVYDGFTDPEQRFRQRYVDLIVNPENREIFIKRATIIRTMRQIFDNK 199

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ   G     R F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 200 GWLEVETPILQSIHGGAA-ARPFVTH---HNTLDIPLYLRIANELYLKRLIVGGFDGVYE 255

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVN 158
           F   +RN      H PEFT LE+Y A++ Y  +M+    ++   A   N+   F+F    
Sbjct: 256 FGKMFRNEGMDRTHNPEFTALEFYVAYKDYHWMMEFTEELLEKVALAVNEDTKFTFGENV 315

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +       +++ EA  +Y  +       N D      L L+ ++ GI +      + + 
Sbjct: 316 IDFQGPYAKLSIIEAIEKYTGV-------NVDTASEEELRLKCKEWGIEIDDTMGKAKLI 368

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK+E +  +   T +  YP   S L   + + P   +RFEL+    E+ NA  EL
Sbjct: 369 DEIFGEKVEEH--LIQPTFIIDYPVEMSPLTKKHRSKPGLVERFELFVNGKEIANAYSEL 426

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP++QR RFE++++  ++   E   +DEDF+  L   MP ++GI +G DRL ML+T   
Sbjct: 427 NDPLDQRERFEEQLRLAERGDEEAMALDEDFIRALEYGMPPTAGIGIGIDRLTMLLTNNA 486

Query: 338 NINEVIWTPFSQSNQE 353
           +I EV++ P  +  ++
Sbjct: 487 SIQEVLFFPQMRPEKK 502


>gi|291390507|ref|XP_002711778.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Oryctolagus cuniculus]
          Length = 596

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 209 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 268

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 269 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 324

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +           
Sbjct: 325 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVKHVTGGYTVTYHPDGPEGQAYEI 384

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 385 DFTPPFRRISMIEELEKALGMKLPETHLYETEETRKILDDICVAKAVECPPPRTTARLLD 444

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 445 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEVCNAYTELN 502

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 503 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 562

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 563 IKEVLLFPAMKPEDKK 578


>gi|319897323|ref|YP_004135519.1| lysyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432828|emb|CBY81193.1| lysyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 502

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVTAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|150014997|ref|YP_001307251.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149901462|gb|ABR32295.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 501

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 167/370 (45%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I S++RE+     FIE+++ 
Sbjct: 144 LKPLPEKWHGLKDPDLRYRQREVDIITNTEVKDTFIKRSKIISAIREFLDAKSFIEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+ AG EK++     +RN 
Sbjct: 204 ILGAIAG-GAAAKPFITH---HNTLDMDMYLRIATELYLKRLIVAGFEKVYEIGRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M+   N++    E        ++Q    +      
Sbjct: 260 GMSVRHNPEFTAIELYEAYSDYNDMMEITENMVAYICEKVNGTTKVAYQGTEIDFKPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT---WSDIFSRILI 223
            IT+ +A   YA +D        +          A++  +  A         ++ + +  
Sbjct: 320 RITMVDAVKEYAGVDFN------EIKSDDEAQTIAKEKHLEFAKPLNTVTKGEVLNALYE 373

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E N+     T +  YP   S L      +P FT+RFE +    ELCNA  EL DPI 
Sbjct: 374 EFGEANM--IQPTFVTDYPVEISPLTKKKRGNPEFTERFEGFVFGRELCNAYSELNDPIV 431

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE++ +E++   +E Y +DE F++ L   MP + G+ MG DRL+M +T + +I +V
Sbjct: 432 QRQRFEQQAKERELGDDEAYMLDEQFMSALETGMPPTGGMGMGIDRLIMFLTDSASIRDV 491

Query: 343 IWTPFSQSNQ 352
           I  P  +  +
Sbjct: 492 ILFPTMRPQK 501


>gi|296314356|ref|ZP_06864297.1| lysine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838911|gb|EFH22849.1| lysine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 503

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKTQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|260581089|ref|ZP_05848910.1| lysyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|260092218|gb|EEW76160.1| lysyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 502

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 168/364 (46%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  + ++  +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|124026775|ref|YP_001015890.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961843|gb|ABM76626.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 513

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 155/367 (42%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R ++ SS+R +  E  F+EI++ 
Sbjct: 150 LQPLPDKWHGLADVEKRYRQRYLDLIVNPQSRKTFRTRALLVSSIRRWLDEKDFLEIETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+L+  G ++++     +RN 
Sbjct: 210 VLQSEAGGA-DARPFITH---HNTLDLPLYLRIATELHLKRLVVGGFQRVYELGRIFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A   Y  +M     ++     ++      ++Q    +      
Sbjct: 266 GISTRHNPEFTSVEIYEAFADYFDMMDLTEKLLSSVCEKICGSTKINYQEQEIDLQPPWR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
             T+ +    +  ID     DN D     +        G++V    DT   + +    + 
Sbjct: 326 RATMHDLVKEFTGIDFELFGDNADDAKAEMSRE-----GLQVPDKADTVGILLNEAFEQA 380

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP   S LA  +       +RFEL+    E  NA  EL+DPI+QR
Sbjct: 381 VEPE--LIQPTFVMDYPIEISPLARKHRTKKGLVERFELFIVGRETANAFSELIDPIDQR 438

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R   +  +K+    E   +DEDF+  L   MP + G+ +G DR VML+T + +I +VI 
Sbjct: 439 ERLLLQQAKKEAGDLEAQSLDEDFINALEVGMPPTGGLGIGIDRFVMLLTDSPSIRDVIA 498

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 499 FPLLRPE 505


>gi|258620334|ref|ZP_05715372.1| lysyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258587213|gb|EEW11924.1| lysyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 512

 Score =  338 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 167/368 (45%), Gaps = 22/368 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 151 LRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFVVRSKVMSAIRNFMISKQFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 211 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +         +  
Sbjct: 267 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGKYA 326

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y  N     +L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 327 RMSMFDAIKHYNPNHAQIQSLTEEDIQNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGET 386

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 387 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 444

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 445 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 504

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 505 FPAMRPQQ 512


>gi|82916992|ref|XP_909898.1| PREDICTED: lysyl-tRNA synthetase-like isoform 1 [Mus musculus]
 gi|148703521|gb|EDL35468.1| mCG49108 [Mus musculus]
          Length = 595

 Score =  338 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 161/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R             L+ R+ I + +R +  E  F+EI++ 
Sbjct: 208 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKLIVRSKIITYIRSFLDELGFLEIETP 267

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 268 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 323

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 324 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGQAYEV 383

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 384 DFTPPFRRISMVEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPLTTARLLD 443

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 444 KLVGEFLEVTC--ISPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 501

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 502 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 561

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 562 IKEVLLFPAMKPEDKK 577


>gi|262163921|ref|ZP_06031660.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus VM223]
 gi|262027449|gb|EEY46115.1| lysyl-tRNA synthetase (class II) [Vibrio mimicus VM223]
          Length = 510

 Score =  338 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 166/368 (45%), Gaps = 22/368 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFVVRSKVMSAIRNFMISKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +         +  
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGKYA 324

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y  N      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 325 RMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 443 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 502

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 503 FPAMRPQQ 510


>gi|91775150|ref|YP_544906.1| lysyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123380554|sp|Q1H372|SYK_METFK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|91709137|gb|ABE49065.1| lysyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 509

 Score =  338 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R + + ++F+E+++ 
Sbjct: 154 LRPLPEKFHGLADQETKYRQRYVDLIVSEETRKTFVARSKIVAAIRAFMLSHEFLEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   +Y++ +PE   K+L+  G E++F     +RN 
Sbjct: 214 MLHPIPGGAA-AKPFITH---HNALDLQMYMRIAPELYLKRLVVGGFERVFEINRNFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM    + IR AA       +  +Q    +     E
Sbjct: 270 GLSVRHNPEFTMMEFYAAYTDYKWLMDFTESCIRAAAIAACGSAVVEYQGRELDLGKPFE 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+  A  +YA              D+  L  + ++ G+          +   +  E  
Sbjct: 330 RLTIIGAIQKYA-----PQYTLEQLSDQAFLRQELKKFGVEALPHLGLGALQLALFEETA 384

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    +DP  T+R+EL+    E+ N   EL D  +Q  
Sbjct: 385 ESQ--LWNPTYIIDYPVEVSPLARASDSDPSITERYELFITGREIANGFSELNDAEDQAA 442

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    D DF+  L   MP + G  +G DRLVML+T + +I +VI  
Sbjct: 443 RFHAQVAAKEAGDDEAMYYDGDFIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILF 502

Query: 346 PFSQSN 351
           P  +  
Sbjct: 503 PHMRPE 508


>gi|251792905|ref|YP_003007631.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534298|gb|ACS97544.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 502

 Score =  338 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPNKFHGLTDQEVRYRQRYLDLIANEDSRRTFMIRSQVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---AEKGIVKEDLYDLERAKAAAKRLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|260434775|ref|ZP_05788745.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260412649|gb|EEX05945.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 502

 Score =  338 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 153/367 (41%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  + S +R +  +  F+EI++ 
Sbjct: 138 LQPLPDKWHGLADVEKRYRQRYLDLVVSPDSRETFRRRARLVSGIRRWLDQRDFLEIETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +  PL L+ + E   K+L+  G E+++     +RN 
Sbjct: 198 VLQSEPGGA-DARPFETH---HNALDLPLTLRIATELHLKRLVVGGFERVYELGRIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M+    ++     EV      ++Q    +      
Sbjct: 254 GVSTRHNPEFTSVEIYQAYSDYIGMMELTEQMVSAVCQEVCGTTTITYQGTEIDLAPPWR 313

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEK 225
             T+ E       +D  +         R          G+ V    D+   + +    + 
Sbjct: 314 RATMHELVQDATGLDFNSFSS------REAAAAAMTAKGLHVPELADSVGRLLNEAFEQA 367

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL DP++QR
Sbjct: 368 VETT--LIQPTFVTDYPVEISPLARPHRSKPGLVERFELFIVGREHANAFSELTDPVDQR 425

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   K     E   +DEDF+  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 426 QRLEAQQARKAAGDLEAQGLDEDFVTALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 485

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 486 FPLLRPE 492


>gi|163748443|ref|ZP_02155697.1| lysyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161332021|gb|EDQ02698.1| lysyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 502

 Score =  338 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 85/369 (23%), Positives = 160/369 (43%), Gaps = 22/369 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + +++R + ++ +F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVVAAIRNFMIKKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHTIPGGAT-ARPFITH---HNALDIEMYLRVAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A          +     +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIATELCGSPKLPYGEHTVDFGGPYV 314

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y  + +   ++   +  D   +   A+  G+ +    T   +   I  E 
Sbjct: 315 RLSMLDAIKKYNPDNETIQSMTYEEVKDVEFMRDLAKSIGMTIEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YP   S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPQ--LIQPTFITGYPVDISPLARRNDENHFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 QRFKAQVAAKDAGDDEAMFYDADYIRALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSNQE 353
            P  +   +
Sbjct: 493 FPAMRPQAQ 501


>gi|301169952|emb|CBW29556.1| lysine tRNA synthetase, inducible [Haemophilus influenzae 10810]
          Length = 502

 Score =  338 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVTAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|318607021|emb|CBY28519.1| lysyl-tRNA synthetase (class II) [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 505

 Score =  338 bits (866), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 160/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQVMSGIRRFMVEKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R     V    +  + +   +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIALTEELFRTLTETVLGSSVVQYGDQTFDFDKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  GI+V        +   I  E  
Sbjct: 326 KLTMKEAICKY-----RPETNVADLDDMDKAVAIAESLGIKVEKSWGLGRVQCEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|313158752|gb|EFR58139.1| lysine--tRNA ligase [Alistipes sp. HGB5]
          Length = 573

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 90/377 (23%), Positives = 161/377 (42%), Gaps = 35/377 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  I S++RE+F    
Sbjct: 142 IRPLPVVKEKDGQTFDAFTDPEVRYRQRYVDLAVNPQVREVFVKRAKIISTMREFFNSKG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           ++E+++  LQ  PG     R F T     + +    YL+ + E   KKL+  G + ++ F
Sbjct: 202 YVEVETPILQPIPGGAA-ARPFITH---HNALDIDQYLRIASELYLKKLIVGGFDGVYEF 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNC 159
              +RN      H PEFT++E Y A++ Y  +M+    ++   A         +      
Sbjct: 258 GKNFRNEGMDRTHNPEFTVMEIYVAYKDYLWMMEFTEQMLEKVAVAVNGTTEVTLDGKQI 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    +++ +A       D+              L    ++  +          +  
Sbjct: 318 SFKAPFRRLSMTDAIREKTGYDITGQS-------EEQLREACKRLNVETDATMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  +  E    +   T +  YP   S L   + ++P  T+RFEL+    ELCNA  EL 
Sbjct: 371 AIFGQYCEEE--LVQPTFVTDYPIEMSPLCKRHRSNPELTERFELFVNGKELCNAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF++++Q  +K  +E   ID DF+  L   MP  SG+ +G DRL M +T   +
Sbjct: 429 DPIDQLERFQEQLQLSEKGDDEAMFIDMDFVRALEYGMPSCSGMGIGIDRLTMFMTDQAS 488

Query: 339 INEVIWTPFSQSNQEEI 355
           I +V++ P  +  ++ +
Sbjct: 489 IQDVLFFPQMRPEKKAV 505


>gi|123443572|ref|YP_001007545.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166230601|sp|A1JPL4|SYK_YERE8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|122090533|emb|CAL13402.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 505

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 160/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQVMSGIRRFMVEKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R     V    +  + +   +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIALTEELFRTLTETVLGSSVVQYGDQTFDFGKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  GI+V        +   I  E  
Sbjct: 326 KLTMKEAICKY-----RPETNVADLDDMDKAVAIAESLGIKVEKSWGLGRVQCEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|71276051|ref|ZP_00652332.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Dixon]
 gi|71899473|ref|ZP_00681631.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Ann-1]
 gi|170729665|ref|YP_001775098.1| lysyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687952|sp|B0U572|SYK_XYLFM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71163134|gb|EAO12855.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Dixon]
 gi|71730786|gb|EAO32859.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Ann-1]
 gi|167964458|gb|ACA11468.1| lysyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 506

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 162/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  +LR +     F+E+++ 
Sbjct: 151 LRPLPDKWHGLTDVEQRYRQRYVDLIVTPESREIFIKRSKIIRALRTWLDARLFLEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG     + F T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 211 MMHYIPGGAA-AKPFVT---YHNALDLELYLRVAPELYLKRLVVGGLERVYEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+ +Y ++M     +IR  A+ V       +     +      
Sbjct: 267 GVSTRHNPEFTMLELYEAYSTYHEVMDLAETMIRDTAQSVLGTTQVIWDGAQIDLGPIFR 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA   +        +   +  DR  L L  ++  I+V     W  +   I    +
Sbjct: 327 RWRMDEAVCHH-----NPEISVAECTDRDALLLHCERLKIKVKSSYGWGRLLLSIFEATV 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +  +T RFEL+    E+ N   EL DP EQ  
Sbjct: 382 EHT--LIQPTFITDHPVEISPLARESDIESGYTDRFELFINGKEIANGFSELNDPEEQAM 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+K+++ K+   +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  
Sbjct: 440 RFQKQVEAKEGGDDEAMYYDADYIRALEYGMAPTGGLGIGVDRLVMLLTGSTSIRDVLLF 499

Query: 346 PFSQSNQ 352
           P+ +  +
Sbjct: 500 PYMRPER 506


>gi|16761821|ref|NP_457438.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29143308|ref|NP_806650.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213616408|ref|ZP_03372234.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
 gi|213646960|ref|ZP_03377013.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
 gi|33301733|sp|Q8Z3X8|SYK1_SALTI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|25293040|pir||AF0871 lysyl tRNA synthetase (LysRS) [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16504123|emb|CAD02870.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138942|gb|AAO70510.1| lysyl tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 505

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSKILAGIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       + +   +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTQVPYGDEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMHEAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|161506412|ref|YP_001573524.1| lysyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189082966|sp|A9MRI4|SYK_SALAR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|160867759|gb|ABX24382.1| hypothetical protein SARI_04610 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 505

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSKILAGIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       + +   +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGNTQVPYGDEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|317499616|ref|ZP_07957878.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893091|gb|EFV15311.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 638

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 162/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I S +R Y     F+E+++ 
Sbjct: 137 LKPLPEKFHGLTDTDTRYRQRYVDLIMNEESKEVFIKRSKIISKIRSYLDGQGFMEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G  +  R F T     + + + + L+ S E   K+L+  G EK++     +RN 
Sbjct: 197 MLVSNAGGAS-ARPFETHY---NALSEDVKLRISLELYLKRLIVGGLEKVYEIGRVFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  AE V       +++   +     E
Sbjct: 253 GVDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRYLAEEVCGGTKIQYKDFEIDLGKPFE 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y+ +D        +          A++  +         DI +    E +
Sbjct: 313 RITMVDAVKKYSGVDFK------EIKTLEEARAAAEEHHVEYEERHKRGDILNLFFEEFV 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P DP + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 367 EDK--LIQPTFVMDHPVEISPLTKRKPEDPDYVERFEFFMNGWEMANAYSELNDPIDQRE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDFL  L   MP + GI  G DR+VML+T +  I +V+  
Sbjct: 425 RFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMVMLLTNSTAIRDVLLF 484

Query: 346 PFSQS 350
           P  +S
Sbjct: 485 PTMKS 489


>gi|238763212|ref|ZP_04624177.1| Lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698485|gb|EEP91237.1| Lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 505

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 161/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + + +R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQVMAGIRSFMVEKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R    +V    +  + +   +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTEKVLGSSVVQYGDQTFDFGKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  GI+V        +   I  E  
Sbjct: 326 KLTMKEAICKY-----RPETNVADLDDMDKAVAIAESLGIKVEKSWGLGRVQCEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDDNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPIK 505


>gi|116328407|ref|YP_798127.1| lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116331136|ref|YP_800854.1| lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|122281115|sp|Q04SM4|SYK_LEPBJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|122283805|sp|Q050Q1|SYK_LEPBL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116121151|gb|ABJ79194.1| Lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116124825|gb|ABJ76096.1| Lysine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 495

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 161/373 (43%), Gaps = 34/373 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR R              + R+ I S +R +     
Sbjct: 135 IRPLPVVKEKDGVIYDAFADVEQRYRMRYVDLVVNDHVRDTFITRSRIVSEIRNFLTNEG 194

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           F+E+++  +Q   G     R F T     + +   L+L+ +PE   K+L+  G +++F  
Sbjct: 195 FLEVETPMMQPIAGGAA-ARPFVTH---HNTLDMQLFLRIAPELYLKRLIVGGMDRVFEL 250

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFTM+E Y A      ++     +I   A+  +  +      +  
Sbjct: 251 NRNFRNEGISTKHNPEFTMMEAYIAFADMNTMLDLTERLITHLAQKIHGALKIQYGKDLI 310

Query: 161 PFSEPEY-ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
             S P   IT  +    Y+ ID                  +A +  + V+  +T   +  
Sbjct: 311 DLSPPWRKITYTDIIKEYSGIDFS------LITSLEEAKKKASELNVDVSKCNTIWKVAD 364

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            +  EK EPN  +     +  YP   S LA   P  P + +RFE Y    E+ NA  EL 
Sbjct: 365 EVFSEKAEPN--LIQPVFIIDYPKELSPLAKSNPDKPGYVERFEPYVAGREIGNAFTELN 422

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +Q+ RFE ++Q+++   +E + +DED++  L   MP + G+ +G DRLVML+T +++
Sbjct: 423 DPFDQKERFEDQVQQREAGDDEAFMMDEDYIRALEYGMPPTGGLGIGIDRLVMLLTDSHS 482

Query: 339 INEVIWTPFSQSN 351
           I + I  P  +  
Sbjct: 483 IRDTILFPLMRPE 495


>gi|71897687|ref|ZP_00679932.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Ann-1]
 gi|71732590|gb|EAO34643.1| Lysyl-tRNA synthetase, class-2 [Xylella fastidiosa Ann-1]
          Length = 506

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 158/366 (43%), Gaps = 24/366 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  +LR +     F+E+++ 
Sbjct: 151 LRPLPDKWHGLTDVEQRYRQRYVDLIVTPESREIFIKRSKIIRALRTWLDARLFLEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG     + F T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 211 MMHYIPGGAA-AKPFVT---YHNALDLELYLRVAPELYLKRLVVGGLERVYEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE Y A+ +Y ++M     +IR  A+          +           
Sbjct: 267 GVSTRHNPEFTMLELYEAYSTYHEVMDLAETMIRDTAQSVLGTTQVIWDGAQIDLGPIFR 326

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
               +    +        +   +  DR  L L  ++  I+V     W  +   I    +E
Sbjct: 327 RWRMDDAVCH----HNPEISVAECTDRDALLLHCERLKIKVKSSYGWGRLLLSIFEATVE 382

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +  +T RFEL+    E+ N   EL DP EQ  R
Sbjct: 383 HT--LIQPTFITDHPVEISPLARESDIESGYTDRFELFINGKEIANGFSELNDPEEQAMR 440

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+K+++ K+   +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  P
Sbjct: 441 FQKQVEAKEGGDDEAMYYDADYIRALEYGMAPTGGLGIGVDRLVMLLTGSTSIRDVLLFP 500

Query: 347 FSQSNQ 352
           + +  +
Sbjct: 501 YMRPER 506


>gi|237729830|ref|ZP_04560311.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226908436|gb|EEH94354.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 505

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 163/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQIMAGIRQFMVGRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       +     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTTEVPYGEEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  +       A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIQKY-----RPETNMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|206580188|ref|YP_002239893.1| lysyl-tRNA synthetase LysS homolog [Klebsiella pneumoniae 342]
 gi|288936730|ref|YP_003440789.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290510214|ref|ZP_06549584.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|206569246|gb|ACI11022.1| lysyl-tRNA synthetase LysS homolog [Klebsiella pneumoniae 342]
 gi|288891439|gb|ADC59757.1| lysyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289776930|gb|EFD84928.1| lysyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 505

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANEESRHTFRIRSQILATMRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+    +    + +   +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKTEVPYGDQVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  ++         +  D  +       A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIKKH-----RPETNMADLDNFDAAKALAESLGIQVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|59711060|ref|YP_203836.1| lysyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|75354565|sp|Q5E7P8|SYK_VIBF1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|59479161|gb|AAW84948.1| lysine tRNA synthetase, inducible [Vibrio fischeri ES114]
          Length = 501

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 90/367 (24%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + +++R + V+  F+E+++ 
Sbjct: 140 LRPLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFIVRSKVVAAIRNFMVDKGFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 200 MMHVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     ++   A  V       +     +   +  
Sbjct: 256 GLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSTVATSVLGSDKMPYGEHTVDFGGKYA 315

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y  +      L      DR L+   A+   + V    T   +   I  E 
Sbjct: 316 RMSMLDAIKQYNPDHAEIQALTYEGVKDRDLMVSIAKSVHVDVESFWTCGQLLEEIFGET 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 376 AEPK--LMQPTFITEYPADISPLARRNDDNDFITDRFEFFIGGREVANGFSELNDAQDQD 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 434 ERFKAQVNAKESGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 493

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 494 FPSMRPQ 500


>gi|113461151|ref|YP_719219.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|112823194|gb|ABI25283.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 496

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 165/365 (45%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R Y V N F+E+++ 
Sbjct: 141 LRPLPDKFHGLSDQEMRYRQRYVDLIVNEKSYNTFKLRSKILAEIRNYMVSNGFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   LYL+ SPE   K+L+  G +++F     +RN 
Sbjct: 201 MMQVIPGGAS-ARPFITH---HNALNSDLYLRISPELFLKRLIVGGFDRVFEINRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y AH  Y  L+K   N+ R  A       I  + N+  +      
Sbjct: 257 GISPRHNPEFTMMELYMAHADYRDLIKLTENLFRTVAINTLGSPIVKYGNIEFDFSKPFV 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA   Y N      +   D          AQ+ GI+V        + S I  E  
Sbjct: 317 QMTMREAIIHYGN-----DIQLDDIMSYESAVKIAQKLGIQVEKSWGLGRLQSEIFEEVA 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     DP +T RFE +    E+ N   EL D  +Q  
Sbjct: 372 EKH--LIQPTFITEYPAEISPLARRNDIDPEYTDRFEFFIGAREIGNGFSELNDAEDQAE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++ K+   +E    D+D++  L   MP ++G+ +G DR+VML+T ++ I +VI  
Sbjct: 430 RFRDQVKAKEAGDDEAMFYDDDYVIALEYGMPPTAGLGIGIDRMVMLLTDSHTIRDVILF 489

Query: 346 PFSQS 350
           P  + 
Sbjct: 490 PTLKP 494


>gi|16716381|ref|NP_444322.1| lysyl-tRNA synthetase isoform 2 [Mus musculus]
 gi|20178134|sp|Q99MN1|SYK_MOUSE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|13345380|gb|AAK19309.1| lysyl-tRNA synthetase [Mus musculus]
 gi|23273634|gb|AAH36289.1| Lysyl-tRNA synthetase [Mus musculus]
 gi|74198517|dbj|BAE39740.1| unnamed protein product [Mus musculus]
          Length = 595

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 208 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETP 267

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 268 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 323

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 324 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGQAYEV 383

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 384 DFTPPFRRISMVEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLD 443

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 444 KLVGEFLEVTC--ISPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 501

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 502 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 561

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 562 IKEVLLFPAMKPEDKK 577


>gi|218133838|ref|ZP_03462642.1| hypothetical protein BACPEC_01727 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991213|gb|EEC57219.1| hypothetical protein BACPEC_01727 [Bacteroides pectinophilus ATCC
           43243]
          Length = 645

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 158/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I   +R +     F+E+++ 
Sbjct: 140 LQVLPEKFHGLTDTEIRYRQRYLDLIMNPEVKTTFVKRSQIIKEIRNFLDGRDFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 200 MLVSNAGGAA-ARPFETHY---NALDEDVKLRISLELYLKRLIVGGMERVYEIGRVFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M+   ++ R   E         + +V  +     E
Sbjct: 256 GVDTRHNPEFTLMELYQAYTDYYGMMELAESLYRTVCEKVNGTTKVKYGDVEIDFSKPFE 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y+ +D      + +          A++ G+         DI +    E +
Sbjct: 316 RITMLDAVKKYSGVDFTQIKTDEE------AKAVAKEKGVAFEDRHKKGDILNLFFEEFV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P  P + +RFEL+    E+ NA  EL DPI+QR 
Sbjct: 370 EEH--LIQPTFVMDHPLDISPLTKKKPDAPEYVERFELFMNGWEMANAYSELNDPIDQRE 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +         E    DEDFL  L   MP + GI  G DR+VML+T +  I +V+  
Sbjct: 428 RFAAQDALADAGDEEANHTDEDFLNALAYGMPPTGGIGFGIDRMVMLLTDSAAIRDVLLF 487

Query: 346 PFSQS 350
           P  +S
Sbjct: 488 PTMKS 492


>gi|238796546|ref|ZP_04640053.1| Lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719524|gb|EEQ11333.1| Lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 505

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 159/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQVMSGIRSFMVEKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R     +    +  +     +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTENILGSSVVQYGEQTFDFGKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  GI+V        +   I  E  
Sbjct: 326 KLTMKEAICKY-----RPETNVADLDDMDKALAIAESLGIKVEKSWGLGRVQCEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|315634627|ref|ZP_07889911.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476575|gb|EFU67323.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 502

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 100/364 (27%), Positives = 165/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +R+YF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIRDYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A + GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDIDRAKAVAARLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|254447176|ref|ZP_05060643.1| lysyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198263315|gb|EDY87593.1| lysyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 500

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 156/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R+ I   +R Y     F E+++ 
Sbjct: 146 LRPLPDKHKGLSDTEQRYRQRYVDLIVNEESRKVFRLRSQIIQYIRRYLDGRDFQEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 206 MMQVIPGGAT-ARPFVTH---HNALDMDLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM    +++R  A +V        +    +      
Sbjct: 262 GLSTRHNPEFTMLEFYQAYADYHDLMDLTESMLRGIAEDVIGSTTIEAEGEQYDFEKAFA 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV E+   +        +   +  D       A++ GI +        +   I  + +
Sbjct: 322 RMTVKESILHF-----NRDISEAELDDLDSARSLAERLGIPLKDSYGLGKVQIEIFEKTV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    A+P  T+RFE +    E+ N   EL D  +Q  
Sbjct: 377 EHR--LMQPTFITEYPTEVSPLARRLDANPFVTERFEFFVGGREVANGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ EK    +E    D D++  L   +P ++G  +G DRLVML T + +I +V+  
Sbjct: 435 RFKAQVAEKDAGDDEAMHYDADYIRALEYGLPPTAGEGIGIDRLVMLFTDSASIRDVLLF 494

Query: 346 PFSQSN 351
           P  +  
Sbjct: 495 PHMRPE 500


>gi|16766341|ref|NP_461956.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56414986|ref|YP_152061.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62181550|ref|YP_217967.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161615987|ref|YP_001589952.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167550076|ref|ZP_02343833.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167994103|ref|ZP_02575195.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168231145|ref|ZP_02656203.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168236099|ref|ZP_02661157.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168242827|ref|ZP_02667759.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168261798|ref|ZP_02683771.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168463792|ref|ZP_02697709.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168823069|ref|ZP_02835069.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443381|ref|YP_002042292.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194450411|ref|YP_002047025.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194471972|ref|ZP_03077956.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194472758|ref|ZP_03078742.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194736687|ref|YP_002115990.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197250263|ref|YP_002147953.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197265303|ref|ZP_03165377.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197363915|ref|YP_002143552.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|198242473|ref|YP_002217018.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|200387283|ref|ZP_03213895.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204928085|ref|ZP_03219285.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205353964|ref|YP_002227765.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207858303|ref|YP_002244954.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|213161325|ref|ZP_03347035.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213425819|ref|ZP_03358569.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213583165|ref|ZP_03364991.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|238909839|ref|ZP_04653676.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|17865728|sp|P28354|SYK1_SALTY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|75481018|sp|Q57K76|SYK_SALCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81361439|sp|Q5PL30|SYK_SALPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082967|sp|A9N3L6|SYK_SALPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710925|sp|B5F5G4|SYK_SALA4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710926|sp|B5FUF3|SYK_SALDC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710927|sp|B5QXG7|SYK_SALEP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710928|sp|B5RE01|SYK_SALG2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710929|sp|B4T535|SYK_SALNS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238690649|sp|B4TGW0|SYK_SALHS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238690720|sp|B5BFK5|SYK_SALPK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238693697|sp|B4TUQ8|SYK_SALSV RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|16421590|gb|AAL21915.1| constitutive lysine tRNA synthetase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56129243|gb|AAV78749.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62129183|gb|AAX66886.1| lysine tRNA synthetase, constitutive [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161365351|gb|ABX69119.1| hypothetical protein SPAB_03787 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402044|gb|ACF62266.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408715|gb|ACF68934.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194458336|gb|EDX47175.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194459122|gb|EDX47961.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194712189|gb|ACF91410.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195633136|gb|EDX51550.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197095392|emb|CAR60951.1| lysyl tRNA synthetase (LysRS) [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197213966|gb|ACH51363.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197243558|gb|EDY26178.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197290865|gb|EDY30219.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197936989|gb|ACH74322.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199604381|gb|EDZ02926.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204322407|gb|EDZ07604.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205273745|emb|CAR38740.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205324787|gb|EDZ12626.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205328003|gb|EDZ14767.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205334471|gb|EDZ21235.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205338151|gb|EDZ24915.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205340632|gb|EDZ27396.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205349204|gb|EDZ35835.1| lysyl-tRNA synthetase LysS [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206710106|emb|CAR34461.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|261248172|emb|CBG26008.1| LysRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267995194|gb|ACY90079.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301159596|emb|CBW19115.1| Lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312914061|dbj|BAJ38035.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|320087469|emb|CBY97234.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|321225715|gb|EFX50769.1| Lysyl-tRNA synthetase class II [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322613438|gb|EFY10379.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322621030|gb|EFY17888.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322624094|gb|EFY20928.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628167|gb|EFY24956.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322633286|gb|EFY30028.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322636136|gb|EFY32844.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322639475|gb|EFY36163.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322647593|gb|EFY44082.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322648777|gb|EFY45224.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322653832|gb|EFY50158.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322657938|gb|EFY54206.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664041|gb|EFY60240.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322668948|gb|EFY65099.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673058|gb|EFY69165.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322677951|gb|EFY74014.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322681127|gb|EFY77160.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322687943|gb|EFY83910.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322716031|gb|EFZ07602.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323131396|gb|ADX18826.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323194861|gb|EFZ80048.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323196612|gb|EFZ81760.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323202688|gb|EFZ87728.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323207825|gb|EFZ92771.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323212623|gb|EFZ97440.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323214894|gb|EFZ99642.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323222625|gb|EGA06990.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323225096|gb|EGA09348.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323230618|gb|EGA14736.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323235031|gb|EGA19117.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323239070|gb|EGA23120.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323244572|gb|EGA28578.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323247187|gb|EGA31153.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323253330|gb|EGA37159.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323256363|gb|EGA40099.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323262461|gb|EGA46017.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323267443|gb|EGA50927.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323269153|gb|EGA52608.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|326624785|gb|EGE31130.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
 gi|326629078|gb|EGE35421.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332989907|gb|AEF08890.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 505

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSKILAGIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       + +   +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTQVPYGDEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|119505212|ref|ZP_01627287.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase [marine
           gamma proteobacterium HTCC2080]
 gi|119458903|gb|EAW40003.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase [marine
           gamma proteobacterium HTCC2080]
          Length = 503

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 147/366 (40%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+   S +R +  +  F+E+++ 
Sbjct: 148 LRPLPDKYHGLSDQEMRYRQRYVDLIVNPDSRAVFRMRSAAVSFIRRFLDDRGFMEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +  P+YL+ +PE   K+L   G EK++     +RN 
Sbjct: 208 MLHPIPGGAA-AKPFETH---HNALDMPMYLRIAPELYLKRLTVGGFEKVYEINRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y   M     ++R     +       +  +  +      
Sbjct: 264 GLSTRHNPEFTMLEFYWAYADYNDAMDLTEALLRELTQNLLGTMTVPYGELQLDFSQPFA 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V +A  +Y        +       R      A + GI V        I   I     
Sbjct: 324 RLSVLDAIYKY-----NPDITPEQIASREAAAAVAHELGIEVKPSWGLGKIQIEIFEATA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFE +    E+ N   EL DP +Q  
Sbjct: 379 EHR--LEQPTFITAYPTEVSPLARRNDDNPFITDRFEFFVGGREIANGFSELNDPEDQAE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +  EK     E    D D++  L   MP ++G  +G DRLVML+T A +I +V+  
Sbjct: 437 RFRAQAAEKDSGDEEAMHFDHDYVRALEYGMPPTAGEGIGIDRLVMLLTDAASIRDVLLF 496

Query: 346 PFSQSN 351
           P  +  
Sbjct: 497 PHMRPE 502


>gi|28198321|ref|NP_778635.1| lysyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182680960|ref|YP_001829120.1| lysyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130167|sp|Q87EB3|SYK_XYLFT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238691085|sp|B2I848|SYK_XYLF2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28056391|gb|AAO28284.1| lysyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182631070|gb|ACB91846.1| lysyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307579428|gb|ADN63397.1| lysyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 506

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 160/366 (43%), Gaps = 24/366 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  +LR +     F+E+++ 
Sbjct: 151 LRPLPDKWHGLTDVEQRYRQRYVDLIVTPESREIFIKRSKIIRALRTWLDARLFLEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + Y PG     + F T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 211 MMHYIPGGAA-AKPFVT---YHNALDLELYLRVAPELYLKRLVVGGLERVYEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE Y A+ +Y ++M     +IR  A+          +           
Sbjct: 267 GVSTRHNPEFTMLELYEAYSTYHEVMDLAETMIRDTAQSVLGTTQVIWDGAQIDLGPIFR 326

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
               +    + N ++       +  DR  L L  ++  I+V     W  +   I    +E
Sbjct: 327 RWRMDEAVCHHNPEMSVA----ECTDRDALLLHCERLKIKVKSSYGWGRLLLSIFEATVE 382

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +  +T RFEL+    E+ N   EL DP EQ  R
Sbjct: 383 HT--LIQPTFITDHPVEISPLARESDIESGYTDRFELFINGKEIANGFSELNDPEEQAMR 440

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+K+++ K+   +E    D D++  L   M  + G+ +G DRLVML+TG+ +I +V+  P
Sbjct: 441 FQKQVEAKEGGDDEAMYYDADYIRALEYGMAPTGGLGIGVDRLVMLLTGSTSIRDVLLFP 500

Query: 347 FSQSNQ 352
           + +  +
Sbjct: 501 YMRPER 506


>gi|254669925|emb|CBA04495.1| lysyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 503

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  S+R + V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLSDQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +   LYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFVTH---HNALDISLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+   +IIR A+   N     S+     +  S  E
Sbjct: 265 GMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAKISYNGKEVDLESPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|152969073|ref|YP_001334182.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238893514|ref|YP_002918248.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|150953922|gb|ABR75952.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|218117880|dbj|BAH03311.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238545830|dbj|BAH62181.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 505

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANEESRHTFRIRSQILATMRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+    +    + +   +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKTEVPYGDQVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  ++         +  D  +       A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIKKH-----RPETNMADLDNFDAAKALAESIGIQVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|317472903|ref|ZP_07932209.1| lysyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316899623|gb|EFV21631.1| lysyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 637

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 162/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I S +R +     F+E+++ 
Sbjct: 137 LKPLPEKFHGLKDTDARYRQRYVDLIMNEESKDTFIKRSKIISKIRSFLDGQGFMEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G EK++     +RN 
Sbjct: 197 MLVPNAGGAA-ARPFETHY---NALDEDVKLRISLELYLKRLIVGGLEKVYEIGRVFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M+   N+ R  A+ V      ++  +  +     E
Sbjct: 253 GVDTRHNPEFTLMELYQAYTDYNGMMELTENLYRYLAQEVVGSTTITYNGIEMDLGKPFE 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D        D          A +  +         DI +    E +
Sbjct: 313 KITMVDAVKKYAGVDFDEIHTVED------ARKAADEHHVEYEERHKKGDILNLFFEEFV 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P +P + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 367 EDK--LVQPTFVLDHPVEISPLTKKKPENPDYVERFEFFMNGWEMANAYSELNDPIDQRE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDFL  L   MP + GI  G DR+VML+T ++ I +V+  
Sbjct: 425 RFKAQEELLAQGDEEANSTDEDFLNALEIGMPPTGGIGFGIDRMVMLLTDSSAIRDVLLF 484

Query: 346 PFSQS 350
           P  +S
Sbjct: 485 PTMKS 489


>gi|238023019|ref|ZP_04603445.1| hypothetical protein GCWU000324_02941 [Kingella oralis ATCC 51147]
 gi|237865402|gb|EEP66542.1| hypothetical protein GCWU000324_02941 [Kingella oralis ATCC 51147]
          Length = 527

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 155/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRD-------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D              +   R   +KR+ I  ++R + V  Q++E+++ 
Sbjct: 173 LRPLPDKHKGLSDQETKYRQRYVDLIANADSRDVFIKRSKIIQAVRNFMVSEQYLEVETP 232

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 233 MMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 288

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   Y ++M+   + IR A           +     +  S  E
Sbjct: 289 GMSVRHNPEFTMIEFYEAFCDYNRMMQMAEDTIRAACRSVSGSLKIEYNGKEVDLESPFE 348

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y          +    D   L  +  + G  + H      +   +     
Sbjct: 349 RLTILQAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPHAAGLGSLQLALFEGCA 403

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    +    T+RFEL+    EL N   EL DP +Q  
Sbjct: 404 ESK--LWNPTFIVDYPVEVSPLARASDSQAGLTERFELFVVGRELANGYSELNDPEDQAA 461

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T    I +VI  
Sbjct: 462 RFKAQVAQKDAGDDEAMHYDADYIRAMEYGLPPTGGCGIGIDRLVMLLTDTQTIRDVILF 521

Query: 346 PFSQSN 351
           P  +  
Sbjct: 522 PQMRPE 527


>gi|26354188|dbj|BAC40722.1| unnamed protein product [Mus musculus]
          Length = 595

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 208 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETP 267

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 268 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 323

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 324 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGQAYEV 383

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 384 DFTPPFRRISMVEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLD 443

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 444 KLVGEFLEVTC--ISPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 501

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 502 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 561

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 562 IKEVLLFPAMKPEDKK 577


>gi|167745533|ref|ZP_02417660.1| hypothetical protein ANACAC_00224 [Anaerostipes caccae DSM 14662]
 gi|167655254|gb|EDR99383.1| hypothetical protein ANACAC_00224 [Anaerostipes caccae DSM 14662]
          Length = 637

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 162/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I S +R +     F+E+++ 
Sbjct: 137 LKPLPEKFHGLKDTDARYRQRYVDLIMNEESKGTFIKRSKIISKIRSFLDGQGFMEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G EK++     +RN 
Sbjct: 197 MLVPNAGGAA-ARPFETHY---NALDEDVKLRISLELYLKRLIVGGLEKVYEIGRVFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M+   N+ R  A+ V      ++  +  +     E
Sbjct: 253 GVDTRHNPEFTLMELYQAYTDYNGMMELTENLYRYLAQEVVGSTTITYNGIEMDLGKPFE 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D        D          A +  +         DI +    E +
Sbjct: 313 KITMVDAVKKYAGVDFDEIHTVED------ARKAADEHHVEYEERHKKGDILNLFFEEFV 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P +P + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 367 EDK--LVQPTFVLDHPVEISPLTKKKPENPDYVERFEFFMNGWEMANAYSELNDPIDQRE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDFL  L   MP + GI  G DR+VML+T ++ I +V+  
Sbjct: 425 RFKAQEELLAQGDEEANSTDEDFLNALEIGMPPTGGIGFGIDRMVMLLTDSSAIRDVLLF 484

Query: 346 PFSQS 350
           P  +S
Sbjct: 485 PTMKS 489


>gi|294634836|ref|ZP_06713359.1| lysine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091772|gb|EFE24333.1| lysine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 418

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 162/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I +++R + V   F+E+++ 
Sbjct: 63  LRPLPDKFHGLADQETRYRQRYLDLIANESSRETFRTRSKILAAIRNFMVNKGFMEVETP 122

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 123 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 178

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R  ++ V    +  + +   +      
Sbjct: 179 GVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTISQDVLGSSVVQYGDQTFDFSKPFI 238

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA   Y        + + D  D       A+  GI++        +   I  E  
Sbjct: 239 KMSMKEAICHY-----RPDIASADLDDMEKACKIAESLGIKIEKSWGLGRVQCEIFDETA 293

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 294 ESQ--LIQPTFITEYPAEVSPLARRNDENPFITDRFEFFIGGREIGNGFSELNDAEDQAE 351

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +++ K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 352 RFQDQVKAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGVGIDRMMMLFTNSHTIRDVILF 411

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 412 PAMRPQK 418


>gi|262401637|ref|ZP_06078203.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC586]
 gi|262352054|gb|EEZ01184.1| lysyl-tRNA synthetase (class II) [Vibrio sp. RC586]
          Length = 510

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 166/368 (45%), Gaps = 22/368 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFVVRSKVMSAIRNFMISKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +         +  
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGKYA 324

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y  N      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 325 RMSMFDAIKHYNPNHAQIQALTEDDIQNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 443 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 502

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 503 FPAMRPQQ 510


>gi|158338556|ref|YP_001519733.1| lysyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158308797|gb|ABW30414.1| lysyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 517

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 158/370 (42%), Gaps = 28/370 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +S+R Y  E  FIEI++ 
Sbjct: 157 LLPLPDKWHGLTDIAKRYRQRYVDLIVNPSVRETFRRRAQITASIRRYLDEQGFIEIETP 216

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 217 VLNSEAGGA-EARPFIT---YHNTMEMDLYLRIATELHLKRLIVGGFEKVFELGRVFRNE 272

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +I  AA          +Q    +  S   
Sbjct: 273 GISTRHNPEFTTIEVYQAYADYNDMMDLTEALICTAAERSVGSLKVPYQGETIDLTSPWR 332

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEK 225
            +T+ +A      +D  T                A +AGI  V   ++   + +    +K
Sbjct: 333 RVTMHDAVQEKTGLDFTTF------ETVEAAQKAATKAGITGVDDCESVGHVLNEAFEQK 386

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  + +     +RFEL+    E  N+  EL DP++QR
Sbjct: 387 VEAT--LIQPTFILDYPVEISPLAKPHRSQSGLVERFELFIVGRETANSFSELTDPVDQR 444

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   K+    E + +DEDF+  L   MP + G+ +G DRL ML++ A +I +VI 
Sbjct: 445 QRLEAQAARKEAGDLEAHGVDEDFITALEYGMPPTGGLGIGIDRLAMLLSDAASIRDVIA 504

Query: 345 TPFSQSNQEE 354
            P  +  + E
Sbjct: 505 FPLLKPEKSE 514


>gi|312371338|gb|EFR19556.1| hypothetical protein AND_22229 [Anopheles darlingi]
          Length = 1172

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 83/375 (22%), Positives = 154/375 (41%), Gaps = 28/375 (7%)

Query: 1    MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P   +   +++  +R+R              + R+ I S +R +F +  F+E+++ 
Sbjct: 781  LHMLPHLHYGLKDKETRFRQRYLDLMLNNNVRDIFIVRSKIISYVRRFFDQLGFLEVETP 840

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             +    G  T  + F T     + +   L+L+ +PE   K L   G ++++     +RN 
Sbjct: 841  MMNMIAGGAT-AKPFITH---HNDLNMDLFLRIAPELYLKMLTVGGLDRVYEIGRQFRNE 896

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                 H PEFT  E+Y A+  Y  +++    ++       +       +           
Sbjct: 897  GIDLTHNPEFTTCEFYMAYADYNDIIEITQKLLSGMVYAIHGSYKIKYHPEGPEGQEYEI 956

Query: 160  NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            +     + I++  +      +                L     +  +      T + +  
Sbjct: 957  DFTPPFKRISMISSLEEILKVKFPAADQLHTPAAVRFLDELCVKHEVECKPPRTAARLLD 1016

Query: 220  RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            +++ E +E N      T +  +P   S LA  + A    T+RFEL+    E+CNA  EL 
Sbjct: 1017 KLVGEYLEENC--INPTFICDHPQIMSPLAKYHRALTGITERFELFVMKKEVCNAYTELN 1074

Query: 280  DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
            DP  QR RFE++  +K    +E   +DE+F   L   +P + G  MG DR  M +T  NN
Sbjct: 1075 DPAVQRERFEQQAADKAAGDDEAQLVDENFCTALEYGLPPTGGWGMGIDRFTMFLTDCNN 1134

Query: 339  INEVIWTPFSQSNQE 353
            I EV+  P  +  ++
Sbjct: 1135 IKEVLLFPAMKPEEQ 1149


>gi|297539160|ref|YP_003674929.1| lysyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258507|gb|ADI30352.1| lysyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 514

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + ++N+F+E+++ 
Sbjct: 159 LRPLPEKFHGLQDQEVKYRQRYVDLITSEETRATFVARSKVVSAIRNFMIQNEFLEVETP 218

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  +  + F T     + +   +Y++ +PE   K+L+  G E++F     +RN 
Sbjct: 219 MLHPIPGGAS-AKPFITH---HNALDMQMYMRIAPELYLKRLVVGGFERVFEVNRNFRNE 274

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM    N IR AA  A    +  +Q    +     +
Sbjct: 275 GLSVRHNPEFTMMEFYAAYTDYQWLMDFTENCIRTAAIAARGTAVLEYQGRELDLSKPFQ 334

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+  A  +YA              D   L  +  + G +         +   +  E  
Sbjct: 335 RLTIVGAIQKYA-----PQYTLGQLNDEAFLRAEILKHGTKPFDHAGLGALQLALFEETA 389

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T+RFEL+    E+ N   EL D  +Q  
Sbjct: 390 ESQ--LWEPTYIIDYPVEVSPLARASDKNPEITERFELFVTGREIANGFSELNDAEDQAA 447

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +M+ K+   +E    D DF+  L   MP + G  +G DRLVM++T + +I +VI  
Sbjct: 448 RFHAQMKAKEAGDHEAMFYDADFIRALEYGMPPAGGCGIGIDRLVMMITDSASIRDVILF 507

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 508 PHMRAE 513


>gi|145627807|ref|ZP_01783608.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979582|gb|EDJ89241.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 502

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 167/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+ +Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYANYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|261250317|ref|ZP_05942893.1| lysyl-tRNA synthetase (class II) [Vibrio orientalis CIP 102891]
 gi|260939433|gb|EEX95419.1| lysyl-tRNA synthetase (class II) [Vibrio orientalis CIP 102891]
          Length = 510

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 90/367 (24%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R +     ++E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFIIRSKLVSAIRNFMSSKGYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++   A  V       + +       +  
Sbjct: 265 GLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTVAMDVLGSTSMPYGDETVEFGGQYA 324

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y         L   D  DR  +   A+   + V    T   +   I  E 
Sbjct: 325 RLSMFDAIKQYNPEHAEIQALTEVDLQDRDKMVAIAKSVHVEVETFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPQ--LIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAQDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRL ML T  + I +VI 
Sbjct: 443 ERFKAQVNAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVIL 502

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 503 FPAMRPQ 509


>gi|297588654|ref|ZP_06947297.1| lysine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574027|gb|EFH92748.1| lysine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 636

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 164/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I S++RE+     F+E+D+ 
Sbjct: 133 LQILPEKWHGLKDPDLRYRQRYVDLIMNPEIKDTFVKRSRIISAIREFLDTRGFLEVDTP 192

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   +YL+ + E   K+L+  G +K++     +RN 
Sbjct: 193 ILNTIAGGA-NARPFITH---HNTLDIDMYLRIANELYLKRLIVGGFDKVYEMGRMFRNE 248

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPE 166
                H PE+T +E Y+A+  Y  +M     ++    E  N  +   F     +     +
Sbjct: 249 GMDHTHNPEYTAIELYQAYADYNDMMDITEQLVAFVCEKVNGSMKAQFGETEIDFTPPWK 308

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   YA+I+        +          A+   + +  + +  ++ +       
Sbjct: 309 RITMVDAIKEYADINFD------EIETDEQAREVAKANNVDIKENMSRGEVINECFEHFC 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D R+T RFE + C  E+ NA  EL +PI+Q+ 
Sbjct: 363 EEK--LIQPTFVLGHPVEVSPLAKRNPDDERYTHRFEAFVCTKEIANAFSELNNPIDQKE 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++ ++   +E   +D DFL  L   +P + G+ +G DRL+M++T   +I +++  
Sbjct: 421 RFLKQVEARENGDDEAQMMDYDFLNALEVGLPPTGGLGIGVDRLIMMLTNNESIRDIMLF 480

Query: 346 PFSQS 350
           P  + 
Sbjct: 481 PTMKP 485


>gi|94968314|ref|YP_590362.1| lysyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94550364|gb|ABF40288.1| lysyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 508

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 101/372 (27%), Positives = 168/372 (45%), Gaps = 24/372 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YRRR              +KR  I  ++R +F +  F+E+++ 
Sbjct: 139 LLPLPEKWHGLTDVELRYRRRYVDMNMDPDVREVFIKRARILQTMRSFFDQRGFVEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F+T     + +   LYL+ +PE   K+L+  G ++++     +RN 
Sbjct: 199 MLQSQYGGAA-ARPFTTH---HNTLDMDLYLRIAPELYLKRLVVGGIDRVYEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE+Y A+  Y  LM     + R  A             +   FS+ E 
Sbjct: 255 GISTRHNPEFTMLEFYWAYADYFDLMTLTEELFRQLATEVTGGTTVQYGDHTLDFSKMER 314

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG----IRVAHDDTWSDIFSRILI 223
           +T+ +A  +Y   + G      D      +    +       +    +       + +  
Sbjct: 315 LTMRDAILKYWPENAGPKPAFEDFSSAEKVAAMGKHLSELKLMPFQVNAPKGVTIAAMFE 374

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
              E +  +   TIL  +P   S L+  +  DP + +RFE++   +E+ NA  EL DPIE
Sbjct: 375 ALSEEH--LVQPTILYDFPVEISPLSKNHREDPEWVERFEVFCAGMEIGNAFSELNDPIE 432

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE ++ E+ +   E + +DED++  L   MP + G+ +G DR VML+T + +I +V
Sbjct: 433 QRKRFEMQLAERARGDEEAHQMDEDYVRALSYGMPPTGGMGIGIDRTVMLLTNSKSIRDV 492

Query: 343 IWTPFSQSNQEE 354
           I  P  +  QEE
Sbjct: 493 ILFPLLRPEQEE 504


>gi|303234996|ref|ZP_07321620.1| lysine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302493851|gb|EFL53633.1| lysine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 636

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 165/365 (45%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I S++RE+     F+E+D+ 
Sbjct: 133 LQILPEKWHGLKDPDLRYRQRYVDLIMNPEIKDTFVKRSRIISAIREFLDTRGFLEVDTP 192

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   +YL+ + E   K+L+  G +K++     +RN 
Sbjct: 193 ILNTIAGGA-NARPFITH---HNTLDIDMYLRIANELYLKRLIVGGFDKVYEMGRMFRNE 248

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPE 166
                H PE+T +E Y+A+  Y  +M     ++    E  N  + S F     +     +
Sbjct: 249 GMDHTHNPEYTAIELYQAYADYNDMMDITEQLVAFVCEKVNGSMKSQFGETEIDFTPPWK 308

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   YA+I+        +          A+   + +  + +  ++ +       
Sbjct: 309 RITMVDAIKEYADINFD------EIETDEQAREVAKANNVDIKDNMSRGEVINECFEHFC 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D R+T RFE + C  E+ NA  EL +PI+Q+ 
Sbjct: 363 EEK--LVQPTFVLGHPVEVSPLAKRNPDDERYTHRFEAFVCTKEIANAFSELNNPIDQKE 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++ ++   +E   +D DFL  L   +P + G+ +G DRL+M++T   +I +++  
Sbjct: 421 RFLKQVEARENGDDEAQMMDYDFLNALEVGLPPTGGLGIGVDRLIMMLTNNESIRDIMLF 480

Query: 346 PFSQS 350
           P  + 
Sbjct: 481 PTMKP 485


>gi|213401987|ref|XP_002171766.1| cytoplasmic lysine-tRNA ligase Krs1 [Schizosaccharomyces japonicus
           yFS275]
 gi|211999813|gb|EEB05473.1| cytoplasmic lysine-tRNA ligase Krs1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 590

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 89/375 (23%), Positives = 152/375 (40%), Gaps = 28/375 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P + +  +D   R              R   + R+ I   LR +  +  FIE+++ 
Sbjct: 213 LRMLPKEHYGLKDLEIRHRQRYLDLIMNNSTRDRFVARSRIIQYLRNFLDKRNFIEVETP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 273 MMNMIAGGAT-AKPFVTH---HNDLDMDLYMRVAPELYLKMLVVGGLDRVYEIGRQFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y+A+  Y  LM     ++    +          +           
Sbjct: 329 GADLTHNPEFTSCEFYQAYADYYDLMDMTEELVSSMVKELTGGYVLPYHPEGPDGPSYEL 388

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           N       I + E      N+                L     + G+  A   T + +  
Sbjct: 389 NFARPWRRIHMIEFLEEKLNVKFPPGDQLHTAETNAFLRDLCAKHGVDCAPPQTNARLLD 448

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + + P   +RFE +    ELCNA  EL 
Sbjct: 449 KLVGEYIESEC--INPTFIIGHPQMMSPLAKYHRSQPGLCERFEAFVATKELCNAYTELN 506

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           D  +QR RFE++ ++K +  +E   IDE+F   L   +P + G  +G DRLVM +T +N 
Sbjct: 507 DIFDQRARFEEQARQKDQGDDEAQLIDENFCTALEYGLPPTGGWGIGIDRLVMFLTDSNT 566

Query: 339 INEVIWTPFSQSNQE 353
           I EV+  P  +   +
Sbjct: 567 IREVLLFPHMKPEVK 581


>gi|325285592|ref|YP_004261382.1| Lysyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321046|gb|ADY28511.1| Lysyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 563

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 100/379 (26%), Positives = 170/379 (44%), Gaps = 37/379 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YRRR              +KR  + +++R +F + 
Sbjct: 136 LRPLPLPKVDSEGKVFDEFNDPELRYRRRYADLVVNPHVKEVFVKRTKLFNAMRSFFNDA 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            + E+++  LQ  PG     R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 196 GYFEVETPILQPIPGGAA-ARPFITH---HNSLDIPLYMRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVN 158
           F+  +RN      H PEFT +E Y +++ Y  +M  C  ++   A   N     +F    
Sbjct: 252 FSKNFRNEGMDKTHNPEFTAMEIYVSYKDYNWMMDFCEKLLEHCAIAVNGTSEATFGEHK 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    +T+A++   +   D+              ++  A+  GI V        + 
Sbjct: 312 IDFKAPYARVTMADSIKHFTGFDITG-------KTEAEIFEAAKGMGIEVDATMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGEKCEGNY--IQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPI+QR RFE +++   K  +E    IDEDFL  L   MP +SG+ +G DRL+M +T  
Sbjct: 423 NDPIDQRERFEHQLKLAAKGDDEATEFIDEDFLRALEYGMPPTSGMGIGMDRLIMFLTNN 482

Query: 337 NNINEVIWTPFSQSNQEEI 355
            +I EV++ P  +  ++ +
Sbjct: 483 QSIQEVLFFPQMKPERKAV 501


>gi|225850960|ref|YP_002731194.1| lysyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225645229|gb|ACO03415.1| lysyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 579

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 154/368 (41%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR                R     SLRE+     F+E+++ 
Sbjct: 224 LRALPEKWHGLKDVELRYRRRYVDLIANPKAREIFKIRYKAIKSLREFLESEGFMEVETP 283

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         R F T     + +   +YL+ +PE   K L+  G  +++     +RN 
Sbjct: 284 ILQSVASGAM-ARPFITH---HNALDIDMYLRIAPELYLKMLIVGGFNRVYELGRNFRNE 339

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     ++R        +   +++    +      
Sbjct: 340 GIDTTHNPEFTMVEFYAAYMDYNDLMDLTERLMRKILMDTVGKLKITWEGQELDFSKPFR 399

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +   +A       D    L      D       A++ GI  A   T   I  ++    I
Sbjct: 400 RLRFFDALKEKTGKDKEFFL------DEGKAREFAKEVGIPKAETLTHLKILDKLFEHFI 453

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA  +  DP   +RFEL     E+ NA  EL DP +QR 
Sbjct: 454 EE--DLVQPTFVIDFPKILSPLAKTHRDDPDLVERFELIVNKQEIANAYTELNDPEDQRE 511

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++EK     E   IDE+FL  L   +P + G  +G DRLVM++T + +I EVI  
Sbjct: 512 RFLQQLKEKAAGDEEAMDIDENFLTALEYGLPPTGGEGIGIDRLVMMLTDSPSIREVILF 571

Query: 346 PFSQSNQE 353
           P  +  ++
Sbjct: 572 PTLRPEKD 579


>gi|169824684|ref|YP_001692295.1| lysyl-tRNA synthetase class II [Finegoldia magna ATCC 29328]
 gi|167831489|dbj|BAG08405.1| lysyl-tRNA synthetase class II [Finegoldia magna ATCC 29328]
          Length = 636

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 165/365 (45%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I S++RE+     F+E+D+ 
Sbjct: 133 LQILPEKWHGLKDPDLRYRQRYVDLIMNPEIKDTFVKRSRIISAIREFLDTRGFLEVDTP 192

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   +YL+ + E   K+L+  G +K++     +RN 
Sbjct: 193 ILNTIAGGA-NARPFITH---HNTLDIDMYLRIANELYLKRLIVGGFDKVYEMGRMFRNE 248

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPE 166
                H PE+T +E Y+A+  Y  +M     ++    E  N  + S F     +     +
Sbjct: 249 GMDHTHNPEYTAIELYQAYADYNDMMDITEQLVAFVCEKVNGSMKSQFGETEIDFTPPWK 308

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   YA+I+        +          A+   + +  + +  ++ +       
Sbjct: 309 RITMVDAIKEYADINFD------EIETDEQAREVAKANNVDIKDNMSRGEVINECFEHFC 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D R+T RFE + C  E+ NA  EL +PI+Q+ 
Sbjct: 363 EEK--LVQPTFVLGHPVEVSPLAKRNPDDERYTHRFEAFVCTKEIANAFSELNNPIDQKE 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++ ++   +E   +D DFL  L   +P + G+ +G DRL+M++T   +I +++  
Sbjct: 421 RFLKQVEARENGDDEAQMMDYDFLNALEVGLPPTGGLGIGVDRLIMMLTNNESIRDIMLF 480

Query: 346 PFSQS 350
           P  + 
Sbjct: 481 PTMKP 485


>gi|30961858|gb|AAP40013.1| lysine tRNA synthetase [Citrobacter freundii]
          Length = 505

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 162/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQIMAGIRQFMVGRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       +     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNVLGTTEVPYGEEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  +       A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIQKY-----RPETNMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPTEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|145631261|ref|ZP_01787034.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983188|gb|EDJ90683.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 502

 Score =  337 bits (864), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVTAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|148679578|gb|EDL11525.1| mCG141545, isoform CRA_b [Mus musculus]
          Length = 606

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 219 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETP 278

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 279 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 334

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 335 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGQAYEV 394

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 395 DFTPPFRRISMVEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLD 454

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 455 KLVGEFLEVTC--ISPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 512

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 513 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 572

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 573 IKEVLLFPAMKPEDKK 588


>gi|15896444|ref|NP_349793.1| lysyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|39932231|sp|Q97EB7|SYK_CLOAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|15026267|gb|AAK81133.1|AE007815_3 Lysyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510602|gb|ADZ22238.1| lysyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 515

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 165/365 (45%), Gaps = 24/365 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  ++RE+     ++E+++ 
Sbjct: 155 LKPLPEKFHGLKDPDLKYRQRYVDLIINQDVRETFMKRTAIIKAVREFLDNKDYLEVETP 214

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L       +  R FST     + +   ++L+ + E   K+L+  G EK++     +RN 
Sbjct: 215 VLSTIASGAS-ARPFSTH---HNALDLDMHLRIATELYLKRLIVGGFEKVYEIGKDFRNE 270

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M+   N++  A +        +++    +      
Sbjct: 271 GIDVRHNPEFTMIELYEAYADYNDMMEITENMVAYACQKVNGTTKITYEGTEIDLTPPWR 330

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +    ++ ID  T   + +  +             +   D T  DI + +  E  
Sbjct: 331 RVTMVDIVKEHSGIDFSTVKTDEEAREIAKEKKL---ELKKELKDCTKGDILNALFEEYG 387

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L      +P +T+RFE +    E+CNA  EL DPI Q+ 
Sbjct: 388 EKK--LIQPTFVCDYPVEISPLTKKKRGNPEYTERFEGFIYGREICNAYSELNDPIVQKD 445

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E++   +E Y +D+DF+  L   MP + G+ MG DRLVM +T + +I +VI  
Sbjct: 446 RFMQQLKERELGDDEAYQMDDDFINALEIGMPPTGGMGMGMDRLVMFLTDSPSIRDVILF 505

Query: 346 PFSQS 350
           P  + 
Sbjct: 506 PTMKP 510


>gi|220927852|ref|YP_002504761.1| lysyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219998180|gb|ACL74781.1| lysyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 499

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 94/361 (26%), Positives = 160/361 (44%), Gaps = 27/361 (7%)

Query: 6   SQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +    +D    YR+R              + R+ I  S+R++  +  F+E+D+  L   
Sbjct: 150 EKWHGLKDTDLRYRQRYVDLIVNPEVKNTFILRSKIIKSIRKFLDDRGFLEVDTPLLNTI 209

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
           PG     R F T     + +   +YL+ +PE   K+L+  G EK++     +RN      
Sbjct: 210 PGGAA-ARPFITH---HNTLDIDMYLRIAPELYLKRLIVGGMEKVYEMGRMFRNEGMSVK 265

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYITVA 171
           H PEFTM+E Y A+  Y+ +M+   N++   A          +Q    +       +T+ 
Sbjct: 266 HNPEFTMMEVYEAYNDYKGMMELTENLVSTVAMETLGTTKIQYQGQEIDLTPPWNRMTMI 325

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           EA   Y  ID  T   +            A+   + V       +I + +  E +E N  
Sbjct: 326 EAVKEYTGIDFDTIKTD------EEAKAAAESKKVHVKEGMVRGEILNLMFEEFVESN-- 377

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   T +  YP   S L    P  P  T+RFE +    E+ NA  EL DPI+Q+ RF  +
Sbjct: 378 LVQPTFIYDYPVEISPLTKRKPDCPELTERFEFFITGREMGNAYSELNDPIDQKERFVSQ 437

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++++     E   +DED++  L   MP + G+ +G DRLV+L+T + +I +++  P  + 
Sbjct: 438 VKKRDSGDEEANMMDEDYVTALEYGMPPTGGLGIGVDRLVILLTDSASIRDILLFPTMKP 497

Query: 351 N 351
            
Sbjct: 498 R 498


>gi|297580790|ref|ZP_06942716.1| lysyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535206|gb|EFH74041.1| lysyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 512

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 166/368 (45%), Gaps = 22/368 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 151 LRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+Y++ +PE   K+L+  G +++F     +RN 
Sbjct: 211 MMHVIPGGAS-ARPFITH---HNALDMPMYVRIAPELYLKRLVVGGFDRVFEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +         +  
Sbjct: 267 VLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGKYA 326

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y  N      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 327 RMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGET 386

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 387 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 444

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 445 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 504

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 505 FPAMRPQQ 512


>gi|270290208|ref|ZP_06196434.1| lysyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304385523|ref|ZP_07367867.1| lysine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|270281745|gb|EFA27577.1| lysyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304328027|gb|EFL95249.1| lysine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 498

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 167/365 (45%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R               KR  I S++R Y  ++ F E+++ 
Sbjct: 144 LRPLPDKFHGLQNVEQIYRQRYLDLIANDESMERFRKRTKIVSAIRRYLDDHGFAEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHTQAGGAS-ARPFITH---HNALDIDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M +   I++ A    +     ++Q    +   + E
Sbjct: 260 GIDTRHNPEFTMLETYVAYYDFHDVMDETEGILKAAVNAVSDDGKITYQGTELDLNQDFE 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +YA +D    +   +          A + G++     T   I +    +K+
Sbjct: 320 RLHMVDAIKKYAGVDFWPEMSVEE------ARKLADEHGVKYESWWTVGHIINEFFEDKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +    +     +  +P   S LA     DPRFT RFELY    E  NA  EL DPI+QR 
Sbjct: 374 QDQ--LKQPVFIYGHPVEISPLAKKNADDPRFTDRFELYILGNEYGNAFTELNDPIDQRQ 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E++    E   IDED++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQVAEREAGNEEAEGIDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 491

Query: 346 PFSQS 350
           P  + 
Sbjct: 492 PTMRP 496


>gi|160939908|ref|ZP_02087255.1| hypothetical protein CLOBOL_04799 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437342|gb|EDP15107.1| hypothetical protein CLOBOL_04799 [Clostridium bolteae ATCC
           BAA-613]
          Length = 654

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I +++R+Y     F+E+++ 
Sbjct: 143 LQVLPEKFHGLTDTDMRYRQRYVDLIMNAEVKDTFIKRSRILAAIRKYLGGEGFMEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + L L+ S E   K+L+  G E+++     +RN 
Sbjct: 203 MLVSNAGGAA-ARPFETHF---NALDEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M     + R  A+ V      +++ V  +      
Sbjct: 259 GLDTRHNPEFTLMELYQAYTDYNGMMDLTEKLYRFVAQEVLGTTTITYKGVEMDLGKPFA 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D                   A++ G+         DI +    E  
Sbjct: 319 RITMVDAVKKYAGVDFDQIHT------LEEARAVAKEKGVEFEGRHKKGDILNLFFEEFA 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P + +RFE +    E+ NA  E+ DPI+QR 
Sbjct: 373 EEH--LVQPTFVLDHPVEISPLTKKKPGNPDYVERFEFFMNGWEMANAYSEINDPIDQRE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +   +   E    DEDFL  L   MP + GI  G DR+VML+T +  I +V+  
Sbjct: 431 RFRAQEELLAQGDEEANHTDEDFLNALEVGMPPTGGIGFGIDRMVMLLTDSPAIRDVLLF 490

Query: 346 PFSQS 350
           P  +S
Sbjct: 491 PTMKS 495


>gi|89072537|ref|ZP_01159109.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89051641|gb|EAR57094.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 501

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 157/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + V   F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFVVRSKVVSAIRSFMVTKGFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     ++   A +V       +            
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIAIDVLGSSKMPYGEFEVEFAGPYT 314

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y    +    L      DR L+   A+   + V    T   +   I  E 
Sbjct: 315 RMSMLDAIKQYNPEHEEIQALTYEGVADRELMVKIAKSVHVDVEDFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPQ--LMQPTFITEYPADISPLARRNDENPFITDRFEFFIGGREVANGFSELNDAQDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 QRFKAQVDAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|84393963|ref|ZP_00992703.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84375407|gb|EAP92314.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 510

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 162/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + SS+R +     ++E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNTFIVRSKLVSSIRNFMSSKGYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++  AA  V       + +          
Sbjct: 265 GLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMPYGDETVEFGGTYA 324

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y   +     L   D  +R L+   A++ G+ V    T   +   I  E 
Sbjct: 325 RMSMFDAIKHYTPENANIQALTEDDLQNRELMVKIAEEVGLYVEKFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA    ++P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPQ--LIQPTFITGYPADISPLARRSDSNPFFTDRFEFFIGGREVANGFSELNDAQDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRL ML T  + I +VI 
Sbjct: 443 ERFKAQVNAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVIL 502

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 503 FPAMRPQ 509


>gi|150025270|ref|YP_001296096.1| lysyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149771811|emb|CAL43285.1| Lysine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 563

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 99/379 (26%), Positives = 169/379 (44%), Gaps = 37/379 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR R              +KR  + +++R +F E+
Sbjct: 136 LRPLPLPKTDEEGNIHDAFNDPELRYRMRYVDLVVNPQVKEVFVKRTKLFTAMRNFFNES 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ   G     R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 196 GYMEVETPVLQSIAGGAA-ARPFITH---HNSLDMPLYMRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M    N++   A         +F    
Sbjct: 252 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMTFAENLLDHCATAVNGSSEVTFGEHK 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    +T+ +A   +   D+              L+  A+  GI V        + 
Sbjct: 312 ISFKAPYARVTMTQAIIDFTGFDISG-------KSEAELFAAARNMGIEVNETMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I   K E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGAKCEGNY--IQPTFITDYPKEMSPLCKSHRDNPDLTERFELMVCGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETY-PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPI+QR RFE +++  +K  +E    IDEDFL  L   MP +SG+ +G DRL+M +T  
Sbjct: 423 NDPIDQRERFEHQLKLSEKGDDEANGVIDEDFLRALEYGMPPTSGMGIGMDRLIMFLTNN 482

Query: 337 NNINEVIWTPFSQSNQEEI 355
            +I EV++ P  +  ++++
Sbjct: 483 ASIQEVLFFPQMRPEKKQL 501


>gi|227873284|ref|ZP_03991549.1| possible lysine--tRNA ligase [Oribacterium sinus F0268]
 gi|227840851|gb|EEJ51216.1| possible lysine--tRNA ligase [Oribacterium sinus F0268]
          Length = 651

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 163/369 (44%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +     + D  YR+R              +KR+ I   +R +     F+E+++ 
Sbjct: 144 LYPLPEKFHGLTDTDTRYRQRYVDLIMNEDSRTVFMKRSQILREIRNFLAGRDFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 204 MLVENAGGAA-ARPFETHY---NALNEDVKLRISLELYLKRLIIGGMERVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+   ++ R  A +V      S+Q    +  S   
Sbjct: 260 GIDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGTLHISYQGTPIDLESPFR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA   YA ID                   A++  I         DI +    E  
Sbjct: 320 RLTMTEAIKEYAGIDFDQI------KTLEEARALAKEKEIAYEEHHGIGDIENLFFEEYC 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P+DP   +RFEL+    E+ NA  EL DPI+QR 
Sbjct: 374 EEK--LVQPTFIMDHPVEISPLTKKKPSDPSKVERFELFIYGREMANAYSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +         E    DEDFL  +   MP + GI  G DRLVML+T A +I +V+  
Sbjct: 432 RFKAQDALADAGDEEANHTDEDFLHAMEIGMPPTGGIGYGIDRLVMLLTDAASIRDVLLF 491

Query: 346 PFSQSNQEE 354
           P  +S +++
Sbjct: 492 PTMKSLEKK 500


>gi|313906159|ref|ZP_07839507.1| lysyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313468998|gb|EFR64352.1| lysyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 647

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 157/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R +     F+E+++ 
Sbjct: 141 LQPLPEKFHGLVDTDIRYRQRYVDLIMNQEVKTTFIKRSEIIREIRNFLAGRDFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G E++F     +RN 
Sbjct: 201 MLVDNAGGAA-ARPFITHY---NALGEDKKLRISLELYLKRLIVGGLERVFEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M+   ++ R  A +V       +++   +      
Sbjct: 257 GLDQRHNPEFTLMELYQAYTDYNGMMELTESMFRYLAEKVCGTTTIQYEDKVIDLGKPFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A      ID  T   +            A++ GI         DI +    E  
Sbjct: 317 RLTMEDAIKEETGIDFSTIETD------EEAKALAKEKGIEYEDRHKKGDIVNLFFDEFC 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E  +     T +  +P   S L    P DP   +RFELY    E+CNA  EL DPI+QR 
Sbjct: 371 EDKM--IQPTFIMDHPIEISPLTKKKPEDPSKVERFELYINGWEMCNAYSELNDPIDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +    ++   E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 429 RFAAQDALSEQGDEEAQHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTNSAAIRDVLLF 488

Query: 346 PFSQS 350
           P  +S
Sbjct: 489 PTMRS 493


>gi|224584829|ref|YP_002638627.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|254782479|sp|C0PY12|SYK_SALPC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|224469356|gb|ACN47186.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
          Length = 505

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSKILAGIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       + +   +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTQVPYGDEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLGNFDSAKAVAESIGIHVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|238783658|ref|ZP_04627678.1| Lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238715371|gb|EEQ07363.1| Lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 505

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 159/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRNTFKVRSQVMSGIRSFMVEKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R     +    +  +     +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTENILGSSVVQYGEQTFDFGKPFV 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  GI+V        +   I  E  
Sbjct: 326 KLTMKEAICKY-----RPETNVADLDDMGKAVTIAESLGIKVEKSWGLGRVQCEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|78780096|ref|YP_398208.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|123755041|sp|Q318C3|SYK_PROM9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78713595|gb|ABB50772.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 512

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 162/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R    S +R++     F+EI++ 
Sbjct: 142 LQPLPDKWHGLTDIEKRYRQRYLDLIVNPHSKNVFKTRAKCISFIRQWLDNRNFLEIETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+++  G EK++     +RN 
Sbjct: 202 ILQSEAGGA-EARPFITH---HNTLDIPLYLRIATELHLKRMVVGGFEKVYELGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A  +Y  +M     +I+     V    + ++QN   +      
Sbjct: 258 GISTKHNPEFTSVEIYQAFSNYVDMMNLTEELIKDIVFNVCGSLVINYQNKEIDFSKPWS 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
            I++ +   +Y  ID  +        D        +   +  ++  ++   + + +  +K
Sbjct: 318 RISMKDIVKKYTGIDFDSFSG-----DFQSAKQAVKSINVEFSNKVNSMGRLLNEVFEQK 372

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  +  +    +RFEL+    EL NA  EL+DP++QR
Sbjct: 373 VESE--LIEPTFVIDYPVEISPLARPHLDNKEMVQRFELFIVGRELANAFSELIDPVDQR 430

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R + +   + +  +E + IDEDFL  L   MP + G+ +G DRL+ML+T + +I +VI 
Sbjct: 431 ERMQLQQSLRDEGDHEAHCIDEDFLNALEIGMPPTGGLGIGIDRLIMLITNSPSIRDVIP 490

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 491 FPLLKPE 497


>gi|238752990|ref|ZP_04614449.1| Lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238708778|gb|EEQ01037.1| Lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 505

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 159/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRKTFKIRSQVMSGIRSFMVEKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R     V    +  +     +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTETVLGSSVVQYGEQTFDFGKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  GI++        I   I  E  
Sbjct: 326 KLTMKEAICKY-----RPETNVADLDDMDKAVAIAESLGIKIEKSWGLGRIQCEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFIIEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|26355297|dbj|BAC41133.1| unnamed protein product [Mus musculus]
          Length = 595

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 208 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETP 267

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 268 MMNIIPGGA-EAKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 323

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 324 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGQAYEV 383

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 384 DFTPPFRRISMVEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLD 443

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 444 KLVGEFLEVTC--ISPTFICDHPQIMSPLAKWHRSKGGLTERFELFVMKKEICNAYTELN 501

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 502 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 561

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 562 IKEVLLFPAMKPEDKK 577


>gi|325261222|ref|ZP_08127960.1| lysine--tRNA ligase [Clostridium sp. D5]
 gi|324032676|gb|EGB93953.1| lysine--tRNA ligase [Clostridium sp. D5]
          Length = 649

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I S++R Y   + F+E+++ 
Sbjct: 149 LQILPEKFHGLTNTDIRYRQRYVDLIMNPEVKDTFIKRSKILSAIRRYLDADGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G E+++     +RN 
Sbjct: 209 MLVSNAGGAA-ARPFETHF---NALDEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V       +  V  +     E
Sbjct: 265 GLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRHVAQEVLGTTTIVYNGVEMDLGKPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA ID                   A++ GI         DI S    E +
Sbjct: 325 RITMVDAVKKYAGIDFNEIQTT------EEAKALAKEKGIEFEDRHKKGDILSLFFEEFV 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 379 EEH--LVQPTFVMDHPIEISPLTKKKPENPDYVERFEFFMNGWEMANAYSELNDPIDQRE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDFL  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 437 RFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLF 496

Query: 346 PFSQS 350
           P  ++
Sbjct: 497 PTMKT 501


>gi|330752646|emb|CBL87590.1| lysyl-tRNA synthetase [uncultured Flavobacteria bacterium]
          Length = 563

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 104/379 (27%), Positives = 179/379 (47%), Gaps = 37/379 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR +I +S+RE+  + 
Sbjct: 136 LKPLPLPKEDSEGNIYDEFNDPELRYRQRYVDLIVNSGVKETFIKRTLITNSIREFLNQR 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
           +++E+++  LQ  PG  T  R F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 196 EYLEVETPILQPIPGGAT-ARPFLTH---HNALNIPLYLRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVN 158
           FA  +RN      H PEFT+LE Y +++ Y  +M     ++ + + +          N  
Sbjct: 252 FAKDFRNEGMDRTHNPEFTILELYVSYKDYNWMMDMTERLLEKVSIDSTGNTKVKVGNNI 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +  E I++  +  ++  ID+          D  +L   A+   + + +      I 
Sbjct: 312 IDFKAPYERISIFGSIKKFTGIDISKM-------DESMLRKTAKDLNVEIDNTMGKGKII 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  +K EPN      T +  YP   S L  ++  +   T+RFEL     E+ NA  EL
Sbjct: 365 DSIFGDKCEPN--FIQPTFITDYPKEMSPLTKVHRENKDLTERFELIVNGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPI+Q+ RFEK+++  KK   E    ID DFL  L   MP +SGI +G DRLVML+T  
Sbjct: 423 NDPIDQKERFEKQLELSKKGDKEAGEFIDYDFLRALEYGMPPTSGIGIGIDRLVMLMTDN 482

Query: 337 NNINEVIWTPFSQSNQEEI 355
           ++I EV++ P  +  ++++
Sbjct: 483 SSIQEVLFFPQMRPEKKKV 501


>gi|256419549|ref|YP_003120202.1| lysyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256034457|gb|ACU58001.1| lysyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 504

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 102/355 (28%), Positives = 164/355 (46%), Gaps = 26/355 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +F YR+R              +KR  I  ++R+++ +  ++E+++  LQ  PG  T  
Sbjct: 161 DPEFKYRQRYVDLIVNPQVKEVFIKRTRIMQTIRDFYNDLGYLEVETPILQPIPGGAT-A 219

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F+T     + +  PLY++ + E   K+L+  G E ++ FA  +RN      H PEFT+
Sbjct: 220 RPFTTH---HNALDIPLYMRIANELYLKRLIVGGFEGVYEFAKDFRNEGMDRTHNPEFTV 276

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           +E Y A++ YE +M     ++   A         +      N  +    +T+ EA   + 
Sbjct: 277 MEMYAAYKDYEWMMDTTETLLEKIAIALHGTTEVTVGEKVINFKAPFRRVTMYEAILEHT 336

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            ID+          D   L     Q GI V        +   I  EK E +      T +
Sbjct: 337 GIDVSNM-------DEDQLRATCVQLGIYVKPSMGKGKLIDEIFGEKCEHHYV--QPTFI 387

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L   + + P   +RFEL     EL NA  EL DPI+QR RFE +++  ++ 
Sbjct: 388 TDYPVEMSPLTKKHRSKPGLVERFELMVNGKELANAYSELNDPIDQRARFEDQVKLMERG 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +E   ID DFL  L   MP +SGI +G DRL M++T   +I +V++ P  +  +
Sbjct: 448 DDEAMYIDYDFLRALEYGMPPTSGIGIGIDRLTMIMTNQPSIQDVLFFPQMKPEK 502


>gi|302390919|ref|YP_003826739.1| lysyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302202996|gb|ADL11674.1| lysyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 491

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 169/367 (46%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I  ++RE+  E  F+E+++ 
Sbjct: 137 LRPLPEKWHGLKDVEMRYRQRYVDLIVNSDVRNTFVLRSKIIHTMREHLEEEDFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LYL+ +PE   K+L+  G EK+F      RN 
Sbjct: 197 LMHPIAGGA-EARPFVTH---HNALDMDLYLRIAPELYLKRLIVGGFEKVFEIGKNLRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  YE +M+   ++I   A+ V       +     +      
Sbjct: 253 GISTKHNPEFTSMELYQANADYEDMMEITESVIVNIAQEVLGTLEIEYDGQEIDLSPSWT 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA   YA +D        +  D       A+  G+      +  ++ +    E +
Sbjct: 313 RMTMREAINEYAGVDFS------EVDDFKTAQKLAEDHGVDYEEITSVGELINEFFEEFV 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  YP   S LA   P D  FT+RFEL+    EL NA  EL DPI+Q+ 
Sbjct: 367 --EDELIQPTFITEYPIEVSPLAKRKPEDSDFTERFELFVAGNELANAFSELNDPIDQKQ 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+++M++++   +E + +D D++  L   MP + G+ +G DRLVML+T + +I +VI  
Sbjct: 425 RFKEQMEQREAGDDEAHMMDYDYIRALEYGMPPTGGLGIGIDRLVMLLTDSTSIRDVILF 484

Query: 346 PFSQSNQ 352
           P  +  Q
Sbjct: 485 PHMRPEQ 491


>gi|331007549|ref|ZP_08330706.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC1989]
 gi|330418639|gb|EGG93148.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC1989]
          Length = 512

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 163/379 (43%), Gaps = 36/379 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R Y   + F+E+++ 
Sbjct: 145 LRPLPDKYHGLADQEIRYRQRYVDLMVNTDVRDTFKIRSQVISFIRSYLNSSDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 205 MLQSIPGGAT-ARPFVTH---HNALDMDMYLRIAPELYLKRLVVGGFERVYEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-----------NQKIFSFQN 156
                H PEFTMLE+Y+A+  +  LM    +++R  A              N +    + 
Sbjct: 261 GLSTRHNPEFTMLEFYQAYADFNDLMDLTEDMLRQIALNVLGSTDVKNTVKNAEGEVTEE 320

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
           +  +       ++V ++  +Y        +      D       A+  GI +        
Sbjct: 321 ITYDFAKPFTRLSVFDSILQY-----NDDIKAEVLADEQGARGIAEGLGIPLKDYWGLGK 375

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +   I  + +E    +   T + +YP   S LA     +P  T RFE +    E+ N   
Sbjct: 376 VQIEIFDKTVE--HLLLHPTFITQYPTEVSPLARRNDDNPFVTDRFEFFVGGREIANGFS 433

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL D  +Q  RF+ ++ EK    NE    DED++  L   +P ++G  +G DRLVML+T 
Sbjct: 434 ELNDAEDQAERFKAQVAEKDAGDNEAMHYDEDYIRALEYGLPPTAGEGIGIDRLVMLLTD 493

Query: 336 ANNINEVIWTPFSQSNQEE 354
           + +I +V+  P  +   ++
Sbjct: 494 SPSIRDVLLFPHMRQEHQQ 512


>gi|319776547|ref|YP_004139035.1| lysyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329124058|ref|ZP_08252605.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317451138|emb|CBY87371.1| lysyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327467483|gb|EGF12981.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 502

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 100/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    D+DF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|212710039|ref|ZP_03318167.1| hypothetical protein PROVALCAL_01092 [Providencia alcalifaciens DSM
           30120]
 gi|212687246|gb|EEB46774.1| hypothetical protein PROVALCAL_01092 [Providencia alcalifaciens DSM
           30120]
          Length = 505

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 166/367 (45%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I + +R + V++ F+E+++ 
Sbjct: 149 LRPLPDKFHGLSDQETRYRQRYLDLIANDESRNTFIIRSKILAEVRNFMVDHGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L+    ++ R    +V    +  +     +      
Sbjct: 265 GLSPRHNPEFTMMELYMAYADYRDLIVLTEDLFRILTQKVLGNTVVKYGEQEFDFGKPFT 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       AQ  GI++        I   I  E  
Sbjct: 325 KMTMKEAICKY-----RPETNVADLDDMDKAVAIAQSLGIKIEKSWGLGRIQCEIFEEVA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 380 ESH--LIQPTFITEYPAEVSPLARRNDENPFITDRFEFFIGGREIGNGFSELNDAEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++K +  +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 438 RFAEQVRQKDEGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 497

Query: 346 PFSQSNQ 352
           P  + ++
Sbjct: 498 PALRPSK 504


>gi|261345592|ref|ZP_05973236.1| lysine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282566072|gb|EFB71607.1| lysine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 505

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I + +R + V   F+E+++ 
Sbjct: 149 LRPLPDKFHGLSDQETRYRQRYLDLIANDESRNTFIIRSKILAEVRNFMVSQGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L+K   ++ R    EV    +  +     +      
Sbjct: 265 GLSPRHNPEFTMMELYMAYADYRDLIKLTEDLFRTLTQEVLGNTVVKYGEQEFDFGKPFA 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       AQ  GI++        I   I  E  
Sbjct: 325 KLTMKEAICKY-----RPETNVADLDDMDKAVAIAQSIGIKIEKSWGLGRIQCEIFEEVA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 380 ESH--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++K +  +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 438 RFAEQVRQKDEGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 497

Query: 346 PFSQSNQ 352
           P  + ++
Sbjct: 498 PALRPSK 504


>gi|218708551|ref|YP_002416172.1| lysyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|218321570|emb|CAV17522.1| Lysyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 510

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 162/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + SS+R +     ++E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNTFIVRSKLVSSIRNFMSSKGYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++  AA  V       + +          
Sbjct: 265 GLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMPYGDETVEFGGTYA 324

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y   +     L   D  +R L+   A++ G+ V    T   +   I  E 
Sbjct: 325 RMSMFDAIKHYTPENANIQALTEDDLQNRELMVKIAEEVGLYVEKFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA    ++P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPQ--LIQPTFITGYPADISPLARRSDSNPFFTDRFEFFIGGREVANGFSELNDAQDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRL ML T  + I +VI 
Sbjct: 443 ERFKAQVNAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVIL 502

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 503 FPAMRPQ 509


>gi|164686646|ref|ZP_02210674.1| hypothetical protein CLOBAR_00239 [Clostridium bartlettii DSM
           16795]
 gi|164604375|gb|EDQ97840.1| hypothetical protein CLOBAR_00239 [Clostridium bartlettii DSM
           16795]
          Length = 507

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 169/365 (46%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              L R     +LR Y  +  F+E+++ 
Sbjct: 144 LQVLPEKYHGLKDVDLRYRQRYVDLIVNPEVKQAFLTRTKALKALRSYLDDRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +  P+YL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 ILNTIAGGA-NARPFITH---HNTLDIPMYLRIANELYLKRLIVGGFDKVYEMGRMFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PE+T +E Y+A+  +  +M+   N+I   AEVA    + +FQ    +     +
Sbjct: 260 GMDVNHNPEYTAIEMYQAYADFNDMMELTENVIAHMAEVATGSTVVNFQGTEIDFKPPWK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E    Y+ +D  T   + +          A++ GI +       ++ +    E  
Sbjct: 320 RMTMIECVKEYSGVDFDTIETDEEAL------AVAREKGIEITPGMRRGEVINAFFEEFG 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPR T RFE +A   EL NA  EL DPI+Q+ 
Sbjct: 374 EDK--LIQPTFITHHPVEVSPLAKRNAEDPRKTDRFEAFANKWELANAFSELNDPIDQKE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++++K+   +E   +DEDF+  L   +P + G+ +G DR++ML+T + +I +VI  
Sbjct: 432 RFMDQLRKKELGDDEACDMDEDFINALEVGLPPTGGLGIGIDRVMMLLTNSASIRDVILF 491

Query: 346 PFSQS 350
           P  + 
Sbjct: 492 PTMKP 496


>gi|86147406|ref|ZP_01065719.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834834|gb|EAQ52979.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 510

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 162/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + SS+R +     ++E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNTFIVRSKLVSSIRNFMSSKGYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++  AA  V       + +          
Sbjct: 265 GLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMPYGDETVEFGGTYA 324

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y   +     L   D  +R L+   A++ G+ V    T   +   I  E 
Sbjct: 325 RMSMFDAIKHYTPENANIQALTEDDLQNRELMVKIAEEVGLYVEKFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA    ++P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPQ--LIQPTFITGYPADISPLARRSDSNPFFTDRFEFFIGGREVANGFSELNDAQDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRL ML T  + I +VI 
Sbjct: 443 ERFKAQVNAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVIL 502

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 503 FPAMRPQ 509


>gi|237712336|ref|ZP_04542817.1| lysyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|265752046|ref|ZP_06087839.1| lysyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|229453657|gb|EEO59378.1| lysyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263236838|gb|EEZ22308.1| lysyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 576

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 97/359 (27%), Positives = 164/359 (45%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              +KR+ + SS+REYF    ++E+++  LQ   G 
Sbjct: 157 DKFEDPELRYRQRYVDLAVNEEVKDIFIKRSKVFSSMREYFNSKGYMEVETPILQSIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
               R F T     + +  PLY++ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AA-ARPFITH---HNALDMPLYMRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y A++ Y  +M+    +I     +V         +   +  +  + +T+ ++ 
Sbjct: 273 EFTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTQVKVGDNIIDFKAPYKRVTMLDSI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             +   DL          +   +    Q+  + +        +   I  E  E       
Sbjct: 333 KEHTGYDLTGM-------NEEQIREVCQKLNMEIDDTMGKGKLIDEIFGEFCEGTY--IQ 383

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L  I+ ++P  T+RFEL     ELCNA  EL DPI+Q  RFE++M+ 
Sbjct: 384 PTFITDYPKEMSPLTKIHRSNPDLTERFELMVNGKELCNAYSELNDPIDQLERFEEQMRL 443

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DF+  L   MP +SG+ +G DRL ML+TG + I EV++ P  +  +
Sbjct: 444 SEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQMRPEK 502


>gi|310658261|ref|YP_003935982.1| lysine tRNA synthetase, inducible [Clostridium sticklandii DSM 519]
 gi|308825039|emb|CBH21077.1| lysine tRNA synthetase, inducible [Clostridium sticklandii]
          Length = 506

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 169/369 (45%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              L R+    +L+EY  E  F+E+D+ 
Sbjct: 142 LQILPEKYHGLKDPDLRYRQRYVDLIVNPDVKEAFLIRSKAIKALKEYLDERDFLEVDTP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F T     + +   +Y++ + E   K+L+  G E+++     +RN 
Sbjct: 202 ILSTIAGGAT-ARPFITH---HNTLDIDMYMRIANELYLKRLIVGGFERVYELGKMFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PE+T +E Y+A+  YE +M+     + C A+        ++Q    +      
Sbjct: 258 GMSIKHNPEYTAIEVYQAYADYEDIMRLTEEAVACMAQKSLGTTKINYQGTEIDLTPPWR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +A   +  ID      +            A++  I +        + + +  E  
Sbjct: 318 RLSMIDAIKEFKGIDFNEIQTD------EEAIKVAKENHIEITPVMNRGFVIAAMFEEFC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L+   P DPR T RFE +    E+ NA  EL DPI+QR 
Sbjct: 372 EEH--LIQPTFITHHPVEVSPLSKRNPDDPRLTNRFEAFVNTWEIANAFSELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++++++   +E Y +DEDFL  +   +P + G+ +G DR++ML+T +++I +VI  
Sbjct: 430 RFMDQLKQRELGDDEAYMLDEDFLNAIEVGLPPTGGLGIGIDRVIMLLTNSSSIRDVILF 489

Query: 346 PFSQSNQEE 354
           P  +  +EE
Sbjct: 490 PTMKPIKEE 498


>gi|148679579|gb|EDL11526.1| mCG141545, isoform CRA_c [Mus musculus]
          Length = 632

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 245 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETP 304

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 305 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 360

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 361 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGQAYEV 420

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 421 DFTPPFRRISMVEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLD 480

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 481 KLVGEFLEVTC--ISPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 538

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 539 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 598

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 599 IKEVLLFPAMKPEDKK 614


>gi|298370419|ref|ZP_06981735.1| lysine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281879|gb|EFI23368.1| lysine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 503

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  ++R Y V   ++E+++ 
Sbjct: 149 LRPLPDKHKGLADQEVKYRQRYVDLIVNPESRDTFIKRSKIIQTVRNYMVSEGYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 209 MMHPIPGGAT-AKPFITH---HNALDMPLYLRIAPELYLKRLVVGGLERVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A  +YE++M+    +IR  A  V      S      +  S  E
Sbjct: 265 GMSTRHNPEFTMMEFYEAFCTYERMMEMTEGVIRACAETVCGAAKISCNGKEVDLASPFE 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 325 RLTILEAIKKY-----NPHYTDEQLADEAWLKKEIVKHGESLPPSPGIGSLQLALFEGCA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA      P  T RFEL+    EL N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIIDYPVEVSPLARASDTKPGLTDRFELFVVGRELANGYSELNDPEDQST 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +K    +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  
Sbjct: 438 RFRAQVAQKDAGDDEAMHYDADYIRAMEYGLPPTGGSGIGLDRLVMLLTDSQTIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PQMRPE 503


>gi|291390509|ref|XP_002711779.1| PREDICTED: lysyl-tRNA synthetase isoform 2 [Oryctolagus cuniculus]
          Length = 624

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 237 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 296

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 297 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 352

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +           
Sbjct: 353 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVKHVTGGYTVTYHPDGPEGQAYEI 412

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 413 DFTPPFRRISMIEELEKALGMKLPETHLYETEETRKILDDICVAKAVECPPPRTTARLLD 472

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 473 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEVCNAYTELN 530

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 531 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 590

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 591 IKEVLLFPAMKPEDKK 606


>gi|318042860|ref|ZP_07974816.1| lysyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 502

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 154/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R +  S++R +  E  F+EI++ 
Sbjct: 141 LQPLPDKWHGLSDVEKRYRQRYLDLIVSPDTRETFRRRALAVSAIRRWLDERGFLEIETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +  PL L+ + E   K+L+  G E+++     +RN 
Sbjct: 201 VLQSVPGGA-DARPFETH---HNALDLPLTLRIATELHLKRLVVGGFERVYELGRIFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +I     +V       +Q    +      
Sbjct: 257 GISTRHNPEFTSIEVYQAYADYNDMMDLTEQLIAHVCQQVCGSTTIRYQGNEIDLTPPWR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E       +D G      +          A       A  D+   +      + +
Sbjct: 317 RVTMHELVQEATGLDFGAFGSRAEAAAAMEAKGLAA-----PALADSVGRLLVEAFEQTV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL+DP++QR 
Sbjct: 372 E--TDLIQPTFVIDYPVENSPLARAHRSKPGLVERFELFIVGRETANAFSELIDPVDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R E +M  K    +E   +DEDF+  L   MP + G+ +G DRLVML+T + +I +VI  
Sbjct: 430 RLEAQMARKAAGDDEAQEVDEDFIQALEVGMPPTGGLGIGIDRLVMLLTDSASIRDVIAF 489

Query: 346 PFSQSN 351
           P  +  
Sbjct: 490 PLLRPE 495


>gi|291514973|emb|CBK64183.1| Lysyl-tRNA synthetase (class II) [Alistipes shahii WAL 8301]
          Length = 572

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 93/377 (24%), Positives = 165/377 (43%), Gaps = 35/377 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              ++R  I +++RE+F E  
Sbjct: 142 IRPLPVVKEKDGKTFDAFTDPEVRYRQRYLDLIVNPQVKETFVRRARIMATMREFFNERG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           +IE+++  LQ  PG  +  R F T     + +   LYL+ + E   KKL+  G + ++ F
Sbjct: 202 YIEVETPILQPIPGGAS-ARPFITH---HNSLDIDLYLRIATELYLKKLIVGGFDGVYEF 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNC 159
              +RN      H PEFT +E Y A++ Y  +M+    ++   A         +      
Sbjct: 258 GKNFRNEGMDRTHNPEFTCMEIYVAYKDYLWMMEFTEQMLERVAMAVNGTTELTIDGKPI 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    +T+ +A       D+              L    +Q  + V        +  
Sbjct: 318 SFKAPFRRLTMTDAIREKTGYDITGRS-------EEELREACKQLNVEVDETFGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  +  E    +   T +  YP   S L   + ++P  T+RFEL+    ELCNA  EL 
Sbjct: 371 AIFGQYCEEE--LIQPTFITDYPREMSPLCKRHRSNPDLTERFELFVNGKELCNAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++++  +K  +E   ID DF+  L   MP  SG+ +G DRL M +T  ++
Sbjct: 429 DPIDQLERFQEQLRLSEKGDDEAMFIDMDFVRALEYGMPTCSGMGIGIDRLTMFMTDQSS 488

Query: 339 INEVIWTPFSQSNQEEI 355
           I +V++ P  +  ++ +
Sbjct: 489 IQDVLFFPQMRPEKKVV 505


>gi|158288989|ref|XP_310792.4| AGAP000325-PA [Anopheles gambiae str. PEST]
 gi|157018837|gb|EAA06178.4| AGAP000325-PA [Anopheles gambiae str. PEST]
          Length = 616

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 83/373 (22%), Positives = 152/373 (40%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R +I S +R +F    F+E+++ 
Sbjct: 228 LHMLPHLHYGLKDKETRFRQRYLDLILNNNVRNIFVTRALIISYVRRFFDNLGFLEVETP 287

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +   L+L+ +PE   K L   G ++++     +RN 
Sbjct: 288 MMNMIPGGAT-AKPFITH---HNDLNMDLFLRIAPELYLKMLTVGGLDRVYEIGRQFRNE 343

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  ++     ++       +       +           
Sbjct: 344 GIDLTHNPEFTTCEFYMAYADYNDIIDITQQLLSGMVHAIHGSYKVKYHPDGPEGDEYEI 403

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++  +      +                L     +  +      T + +  
Sbjct: 404 DFTPPFRRISMISSLEEALKVTFPAADQLHTPEAVQFLDALCVKHEVECKPPRTAARLLD 463

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 464 KLVGEFLEETC--INPTFICDHPQIMSPLAKYHRSATGLTERFELFVMRKEVCNAYTELN 521

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP  QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 522 DPAVQRERFEQQAADKAAGDDEAQLVDENFCTALEYGLPPTGGWGMGIDRLTMFLTDSNN 581

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 582 IKEVLLFPAMKPD 594


>gi|91226782|ref|ZP_01261435.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188913|gb|EAS75197.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 505

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 165/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 144 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMSAIRNFMISKQFMEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 204 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A+ V       + +          
Sbjct: 260 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVAQEVLGSTSMPYGDETVEFGGTYT 319

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y  +      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 320 RMSMFEAIKHYNPDHSQIQALTEEDLQNRDLMVSIAKSVHVEVEPFWTCGQLLEEIFGET 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 380 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 438 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 497

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 498 FPAMRPQ 504


>gi|296104551|ref|YP_003614697.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295059010|gb|ADF63748.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 505

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQIMAGIRQFMVNRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +       +     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTTQVPYGEEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  +       A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETNMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|21674209|ref|NP_662274.1| lysyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|39932217|sp|Q8KCM7|SYK_CHLTE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21647373|gb|AAM72616.1| lysyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 511

 Score =  337 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 101/377 (26%), Positives = 172/377 (45%), Gaps = 39/377 (10%)

Query: 1   MHQIPSQP-------------WWNRDFHYRRRPF-----------LLKRNMIQSSLREYF 36
           +  IP                + +R+  YR+R              +KR  I + +R YF
Sbjct: 148 LRPIPIAKEKEVDGQKVIYDAFSDRELRYRQRYVDLIVNPEVRGTFIKRTKIVALMRNYF 207

Query: 37  VENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
             N ++E+++  LQ   G     R F+T     + +   LYL+ + E   K+L+  G + 
Sbjct: 208 ASNGWLEVETPILQPIYGGAA-ARPFTTH---HNALDMQLYLRIANELYLKRLIVGGFDG 263

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQ- 155
           +F FA  +RN      H PEFT +E Y A++ Y  +M+   +++  A    N K  +   
Sbjct: 264 VFEFAKDFRNEGIDRFHNPEFTQVELYVAYKDYIWMMELVEDLLHKACVEVNGKDSTMFL 323

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
               N       +T+A++   Y  +++              L   A+  G+ +    +  
Sbjct: 324 GNEINLKPPFRRLTIADSIREYTGMEIRG-------KSEAQLRDIAKDLGLELDPKISSG 376

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            I   I  E +EP   +   T +  YP   S LA  + ++P   +RFEL     E+CN+ 
Sbjct: 377 KIIDEIFGEFVEPK--LIQPTFITDYPEEMSPLAKKHRSEPGLVERFELIVGGKEVCNSF 434

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP+ QR R E++ + +++  +E   +DEDFL  L   MP  +G+ +G DR+VML+T
Sbjct: 435 SELNDPVIQRERLEEQARLRQRGDDEAMIVDEDFLRALEYGMPPCAGLGIGIDRMVMLLT 494

Query: 335 GANNINEVIWTPFSQSN 351
           G ++I +VI+ P  +  
Sbjct: 495 GQDSIRDVIFFPHMKPE 511


>gi|27363989|ref|NP_759517.1| lysyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|320157368|ref|YP_004189747.1| lysyl-tRNA synthetase (class II) [Vibrio vulnificus MO6-24/O]
 gi|31340442|sp|Q8DEQ9|SYK_VIBVU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|27360106|gb|AAO09044.1| lysyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|319932680|gb|ADV87544.1| lysyl-tRNA synthetase (class II) [Vibrio vulnificus MO6-24/O]
          Length = 510

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMSAIRNFMISKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFVTH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +            
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGTYT 324

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y  +      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 325 RMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 443 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 502

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 503 FPAMRPQ 509


>gi|317049376|ref|YP_004117024.1| lysyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316950993|gb|ADU70468.1| lysyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 505

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFQVRSKIMAGIRQFMVGRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       + +   +     E
Sbjct: 266 GISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTEVPYGDNTFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       A    I+V        + + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDLADLDDFDKAVAIANALHIKVEKSWGLGRVVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  + ++
Sbjct: 499 PALRPSK 505


>gi|37678853|ref|NP_933462.1| lysyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|39932022|sp|Q7MNP6|SYK_VIBVY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|37197594|dbj|BAC93433.1| lysyl-tRNA synthetase, class II [Vibrio vulnificus YJ016]
          Length = 510

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMSAIRNFMISKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +            
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGTYT 324

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y  +      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 325 RMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 443 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 502

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 503 FPAMRPQ 509


>gi|323491500|ref|ZP_08096682.1| lysyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323314254|gb|EGA67336.1| lysyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 505

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 91/367 (24%), Positives = 157/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R +     ++E+++ 
Sbjct: 144 LRPLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFIIRSKLVSAIRNFMSSKGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 204 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFDRVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++   A  V       + +          
Sbjct: 260 GLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTVAMEVLGSTSMPYGDETVEFGGTYA 319

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y  +      L   D  DR  +   A+   + V    T   +   I  E 
Sbjct: 320 RMSMFEAIKHYNPDHAEIQALTEEDLQDRDKMVAIAKSVHVEVETFWTCGQLLEEIFGET 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 380 AEPQ--LIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAQDQD 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRL ML T  + I +VI 
Sbjct: 438 ERFKAQVNAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVIL 497

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 498 FPAMRPQ 504


>gi|260771796|ref|ZP_05880714.1| lysyl-tRNA synthetase (class II) [Vibrio metschnikovii CIP 69.14]
 gi|260613088|gb|EEX38289.1| lysyl-tRNA synthetase (class II) [Vibrio metschnikovii CIP 69.14]
          Length = 510

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 165/368 (44%), Gaps = 22/368 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R +    QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVIRSKVMSAIRNFMTSKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       + +       +  
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSTVALEVLGSTSMPYGDETVEFGGKYA 324

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y         L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 325 RMSMFEAIKHYNPQHAQIQALTEDDLQNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 443 ARFKSQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 502

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 503 FPAMRPQQ 510


>gi|323164582|gb|EFZ50382.1| lysyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 505

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIITEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++ + +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTADLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|145641184|ref|ZP_01796764.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274021|gb|EDK13887.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 502

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 100/364 (27%), Positives = 168/364 (46%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D +     A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFNRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    D+DF+  L   +P ++G  +G DRL ML   A++I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPTAGEGLGIDRLAMLYANASSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|300722131|ref|YP_003711414.1| lysine tRNA synthetase, constitutive [Xenorhabdus nematophila ATCC
           19061]
 gi|297628631|emb|CBJ89209.1| lysine tRNA synthetase, constitutive [Xenorhabdus nematophila ATCC
           19061]
          Length = 504

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 161/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S+LR +     F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQETRYRQRYLDLISNDESRKAFQIRSRVMSALRNFMTSKDFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MMQAIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R    EV    +  +     +      
Sbjct: 265 GISPRHNPEFTMMELYMAYADYQDLIVLTEELFRTLTQEVLGTTLVQYGEQEFDFGKPFT 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  GI V        +   I  E  
Sbjct: 325 KMTMKEAICKY-----RPETNMADLDDMDKAVAIAESLGIEVEKGWGLGRVQCEIFEETA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 380 ESH--LIQPTFITAYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 438 RFAEQVRQKDDGDDEAMFYDEDYITALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 497

Query: 346 PFSQSNQ 352
           P  + N+
Sbjct: 498 PAMRPNK 504


>gi|238759278|ref|ZP_04620444.1| Lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238702439|gb|EEP94990.1| Lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 505

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 91/367 (24%), Positives = 159/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDDSRHTFKIRSQVMSGIRSFMVEKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R     +    +  +     +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTETILGSSVVQYGEQTFDFGKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  G++V        +   I  E  
Sbjct: 326 KLTMKEAICKY-----RPETNVADLDDMDKAVAIAESLGVKVEKSWGLGRVQCEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LVQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQVSAKEAGDDEAMFFDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|238787317|ref|ZP_04631116.1| Lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724579|gb|EEQ16220.1| Lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 505

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 157/367 (42%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFKVRSQVMSGIRRFMVEKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF-SEPE 166
                H PEFTM+E Y A+  Y+ L+     + R   E                F     
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTETVLGSCVVQYGEQTFDFGKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  GI+V        +   I  E  
Sbjct: 326 KLTMKEAICKY-----RPETNVADLDDMDKALAIAESLGIKVEKSWGLGRVQCEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|85860098|ref|YP_462300.1| lysyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85723189|gb|ABC78132.1| lysyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 542

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 105/369 (28%), Positives = 174/369 (47%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I +++R++  E  F+E+++ 
Sbjct: 184 IRPLPEKWHGLTDVETRYRQRHVDLIVNPKVREVFITRSRIINAIRQFMDERDFLEVETP 243

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G  T  R F T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 244 MMQPKAGGAT-ARPFETH---HNALGMDLYLRIAPELYLKRLITGGMERVYEINRNFRNE 299

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ +YE LM     +    A        F +Q ++ +      
Sbjct: 300 GISTFHNPEFTMMEFYQAYATYEDLMDMTEELFASVAMKIFGGLKFQYQGMDIDLTPPWP 359

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I+V E+  R+ +ID           D+   Y  A + G+ V   +    + + I  E +
Sbjct: 360 RISVKESILRHHDIDPDV------LEDQEKAYAYACKLGLEVRKTEPLGKLVTAIFEEVV 413

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     DP  T RFELY    E+ NA  EL DP +QR 
Sbjct: 414 EKE--LVQPTFVTLYPVEVSPLSRRNGKDPSLTDRFELYIAGREIANAFSELNDPQDQRE 471

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +E+++   ET+ +DED++  L   MP ++G  +G DRLVML T + +I +VI  
Sbjct: 472 RFLMQAREREEGNEETHVMDEDYVRVLEYAMPPTAGEGIGIDRLVMLFTDSPSIRDVILF 531

Query: 346 PFSQSNQEE 354
           P  +   +E
Sbjct: 532 PHMRKRDKE 540


>gi|90580578|ref|ZP_01236383.1| lysyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438236|gb|EAS63422.1| lysyl-tRNA synthetase [Photobacterium angustum S14]
          Length = 501

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 156/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + V   F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQEMRYRQRYVDLIVNDDSRHAFVVRSKVVSAIRSFMVTKGFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     ++   A +V       +            
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIAIDVLGSSKMPYGEFEVEFAGPYT 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y         L      DR L+   A+   + V    T   +   I  E 
Sbjct: 315 RMSMLDAIKQYNPEHAEIQALTYEGVADRELMVKIAKSVHVDVEDFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPQ--LMQPTFITEYPADISPLARRNDENPFITDRFEFFIGGREVANGFSELNDAQDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 QRFKAQVDAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|120555184|ref|YP_959535.1| lysyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120325033|gb|ABM19348.1| lysyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 511

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 98/378 (25%), Positives = 160/378 (42%), Gaps = 35/378 (9%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D   R              R     R+ I +++R+YF E  F+E+++ 
Sbjct: 138 LRPLPEKHKGLTDTEARYRHRYVDLMVNEDSRRVFHARSKIINAMRQYFAERDFMEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 198 MLQVIPGGAT-ARPFVTH---HNALGIDMYLRIAPELFLKRLVVGGFERVFEINRNFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ----------KIFSFQNV 157
                H PEFTM+E+Y+A+  Y  LM    +++R   +              K  S + +
Sbjct: 254 GLSTRHNPEFTMVEFYQAYADYNDLMDLTEDMLRTITQKVLGTTTVINTRVLKDGSEETI 313

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +     E +TV +A  RY        +      D       A+  GI V        +
Sbjct: 314 EYDFGKPFERLTVVDAILRY-----NPDITREQLADDAQAREVAKNLGIHVKDIWGLGKV 368

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I     E    +   T +  YP   S LA    +DP  T+RFE +    E+ N   E
Sbjct: 369 QIEIFEATAEHR--LTQPTFITEYPKEVSPLARCKDSDPFVTERFEFFVGGREIANGFSE 426

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L D  +Q  RF+ ++ EK    +E    D+D++  L   +P ++G  +G DRL ML+T +
Sbjct: 427 LNDAEDQAERFQAQVAEKDAGDDEAMFYDDDYVMALEYGLPPTAGEGIGIDRLAMLLTNS 486

Query: 337 NNINEVIWTPFSQSNQEE 354
            +I +VI  P  +   + 
Sbjct: 487 PSIRDVILFPAMRPEHKA 504


>gi|16273131|ref|NP_439367.1| lysyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|1174526|sp|P43825|SYK_HAEIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1574141|gb|AAC22865.1| lysyl-tRNA synthetase (lysU) [Haemophilus influenzae Rd KW20]
          Length = 502

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 168/364 (46%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  + ++  +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L+  PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLNGSPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|261342292|ref|ZP_05970150.1| lysine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288315633|gb|EFC54571.1| lysine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 505

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQIMAGIRQFMVNRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +       +     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTTEVPYGEEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  +       A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETEMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVNAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|262274919|ref|ZP_06052730.1| lysyl-tRNA synthetase (class II) [Grimontia hollisae CIP 101886]
 gi|262221482|gb|EEY72796.1| lysyl-tRNA synthetase (class II) [Grimontia hollisae CIP 101886]
          Length = 504

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 162/370 (43%), Gaps = 22/370 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S++R Y     F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQELRYRQRYVDLIVNEDSRNTFKVRSKLISAIRRYMESKDFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + + + ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMQVIPGGAA-ARPFITH---HNALDQQMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  L+    +++R  A EV  Q    +     +   +  
Sbjct: 255 GLSPRHNPEFTMIEFYMAYADYNDLIDLTEDMLRTVALEVLGQTSMPYGEHTVDFGGKYA 314

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +T+ EA   Y  +      L   D  DR  L   A+   I V    T   +   I  E 
Sbjct: 315 RMTMLEAIKHYNPDHADIQALTEEDVQDRDKLVAIAESLKIYVEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPK--LIQPTFITGYPADVSPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRL ML T  + I +VI 
Sbjct: 433 ARFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVIL 492

Query: 345 TPFSQSNQEE 354
            P  +   ++
Sbjct: 493 FPAMRPQNQK 502


>gi|237726471|ref|ZP_04556952.1| lysyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229434997|gb|EEO45074.1| lysyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
          Length = 576

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 97/359 (27%), Positives = 164/359 (45%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              +KR+ + SS+REYF    ++E+++  LQ   G 
Sbjct: 157 DKFEDPELRYRQRYVDLAVNEEVKDIFIKRSKVFSSMREYFNSKGYMEVETPILQSIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
               R F T     + +  PLY++ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AA-ARPFITH---HNALDMPLYMRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y A++ Y  +M+    +I     +V         +   +  +  + +T+ ++ 
Sbjct: 273 EFTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTQVKVGDNIIDFKAPYKRVTMLDSI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             +   DL          +   +    Q+  + +        +   I  E  E       
Sbjct: 333 KEHTGYDLTGM-------NEEQIREVCQKLNMEIDDTMGKGKLIDEIFGEFCEGTY--IQ 383

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L  I+ ++P  T+RFEL     ELCNA  EL DPI+Q  RFE++M+ 
Sbjct: 384 PTFITDYPKEMSPLTKIHRSNPDLTERFELMVNGKELCNAYSELNDPIDQLERFEEQMRL 443

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DF+  L   MP +SG+ +G DRL ML+TG + I EV++ P  +  +
Sbjct: 444 SEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQMRPEK 502


>gi|302499425|ref|XP_003011708.1| hypothetical protein ARB_01935 [Arthroderma benhamiae CBS 112371]
 gi|291175261|gb|EFE31068.1| hypothetical protein ARB_01935 [Arthroderma benhamiae CBS 112371]
          Length = 620

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 92/375 (24%), Positives = 161/375 (42%), Gaps = 26/375 (6%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  +D   R              R   + R+ I S +R YF E  F+E+++ 
Sbjct: 217 LHQIPSEHYGLKDQEQRFRQRYLDLIMNDSSRNVFVTRSKIVSYIRRYFDERDFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNAIAGGAT-AKPFITH---HNELNMNLFMRIAPELYLKMLIVGGLERVYEMGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     LM    +++    +       +  +       N N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDLMNVTEDLVSGLVKHVTGGYETVFHTQSGEQYNVNW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                 +     L    ++  +      T + +  ++
Sbjct: 393 KAPWKKIEMIPALEEATGEKFPPGDQLHTEETNEFLKKVLKKVNVECTPPLTNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        + +  +P   S LA  +   P   +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEEKC--INPSFIIGHPQMMSPLAKYHRDHPGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K++  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQARQKEQGDDEAQMIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQEEI 355
           EV+  PF + ++  +
Sbjct: 571 EVLAFPFMKEDKTAV 585


>gi|126667156|ref|ZP_01738130.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
           [Marinobacter sp. ELB17]
 gi|126628312|gb|EAZ98935.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase
           [Marinobacter sp. ELB17]
          Length = 514

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 161/378 (42%), Gaps = 35/378 (9%)

Query: 1   MHQIPSQPWWNRDF--HYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR            R   L R+ I +++R++  +  F+E+++ 
Sbjct: 141 LRPLPEKHKGLTDTESRYRHRYVDLMVNEDSRRVFLARSKIITAMRQFLADRDFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 201 MLQVIPGGAT-ARPFMTH---HNALGIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQ----------NV 157
                H PEFTM+E+Y+A+  Y  LM    +++R  AE                     +
Sbjct: 257 GLSTRHNPEFTMVEFYQAYADYNDLMDLTEDMLRSIAEQVLGSSLVVNTAVDADGNETRI 316

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +     + +TV +A  RY        +      D       A+  G++V +      +
Sbjct: 317 EYDFGKTFDRLTVVDAIVRY-----NENVSAEQLADETFARQMAKDLGVKVKNSWGLGKV 371

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I  E  E    +   T +  YP   S LA    ++P  T+RFE +    E+ N   E
Sbjct: 372 HIEIFEETAEHR--LMQPTFITEYPKEVSPLARCKDSNPFVTERFEFFVGGREIANGFSE 429

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L D  +Q  RF  ++ EK    +E    DED++  L   MP ++G  +G DRL ML+T +
Sbjct: 430 LNDAEDQAERFRAQVAEKDAGDDEAMFYDEDYVMALEYGMPPTAGEGIGIDRLAMLLTNS 489

Query: 337 NNINEVIWTPFSQSNQEE 354
            +I +VI  P  +   + 
Sbjct: 490 ASIRDVILFPAMRPEHKA 507


>gi|326794290|ref|YP_004312110.1| Lysyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326545054|gb|ADZ90274.1| Lysyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 500

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ I S++R +  + +F+E+++ 
Sbjct: 145 LRPLPDKHKGLADMEMRYRQRYVDLIVNQESRTTFEVRSKIISTIRRFLEDRRFMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + +   +Y++ +PE   K+L+  G E++F     +RN 
Sbjct: 205 MLQTIPGGAT-ARPFVTH---HNAMDMQMYMRIAPELYLKRLVVGGFERVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA-AEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM    +++R    +V      ++Q    +  +   
Sbjct: 261 GVSTRHNPEFTMIEFYQAYADYNDLMDLTEDMLRTVSEKVLGTTNVTYQGQEFDFGAPFA 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E+   +        L   D          A++  I V        +++ I  E  
Sbjct: 321 RMTMLESILHF-----NPELTVEDLDTLEKATAVAKKLHIDVKPIWGLGKLWTEIFEETA 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +   T RFE +    E+ N   EL DP +Q  
Sbjct: 376 ESK--LIQPTFITEYPAEVSPLARRNDDNEFITDRFEFFVGGREIANGFSELNDPEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++EK    +E    D D++  L   +P ++G  +G DRLVML T + +I +V+  
Sbjct: 434 RFRRQVEEKDAGDDEAMHYDADYINALEYGLPPTAGEGIGIDRLVMLFTDSPSIRDVLLF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMKPQ 499


>gi|212691214|ref|ZP_03299342.1| hypothetical protein BACDOR_00705 [Bacteroides dorei DSM 17855]
 gi|212666446|gb|EEB27018.1| hypothetical protein BACDOR_00705 [Bacteroides dorei DSM 17855]
          Length = 576

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 97/359 (27%), Positives = 164/359 (45%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              +KR+ + SS+REYF    ++E+++  LQ   G 
Sbjct: 157 DKFEDPELRYRQRYVDLAVNEEIKDIFIKRSKVFSSMREYFNSKGYMEVETPILQSIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
               R F T     + +  PLY++ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AA-ARPFITH---HNALDMPLYMRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y A++ Y  +M+    +I     +V         +   +  +  + +T+ ++ 
Sbjct: 273 EFTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTQVKVGDNIIDFKAPYKRVTMLDSI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             +   DL          +   +    Q+  + +        +   I  E  E       
Sbjct: 333 KEHTGYDLTGM-------NEEQIREVCQKLNMEIDDTMGKGKLIDEIFGEFCEGTY--IQ 383

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L  I+ ++P  T+RFEL     ELCNA  EL DPI+Q  RFE++M+ 
Sbjct: 384 PTFITDYPKEMSPLTKIHRSNPDLTERFELMVNGKELCNAYSELNDPIDQLERFEEQMRL 443

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DF+  L   MP +SG+ +G DRL ML+TG + I EV++ P  +  +
Sbjct: 444 SEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQMRPEK 502


>gi|91083579|ref|XP_968212.1| PREDICTED: similar to lysyl-tRNA synthetase [Tribolium castaneum]
 gi|270007824|gb|EFA04272.1| hypothetical protein TcasGA2_TC014562 [Tribolium castaneum]
          Length = 571

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 88/373 (23%), Positives = 152/373 (40%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R                R  I S  R +F E  F+E+++ 
Sbjct: 191 LHMLPHLHYGLKDKETRFRQRYLDLILNSRVREIFEIRAKIISYTRRFFDELGFLEVETP 250

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 251 MMNMIAGGAT-AKPFITH---HNELNMDLFMRVAPELYLKMLVVGGLDRVYEIGRLFRNE 306

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN------- 160
                H PEFT  E+Y A+  Y  L+     +I    +  +       +           
Sbjct: 307 GIDLTHNPEFTSCEFYMAYADYHDLIAITEALISGMVKSIHGSYKIKYHPEGPEGEEVEV 366

Query: 161 -PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                 + I +         +   +  +         L        I      T + +  
Sbjct: 367 DFTPPFKRIPMIATLEEILKVKFPSAENLGSDSTNKFLSDLCTAHNIECPPPRTSARLLD 426

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 427 KLVGEFIEEQCV--NPTFITEHPQIMSPLAKWHRSVPGLTERFELFVMKKEICNAYTELN 484

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++ ++K    +E   IDE+F   L   +P + G  MG DRL M +T  NN
Sbjct: 485 DPMVQRQRFEEQAKDKAAGDDEAQLIDENFCTALEYGLPPTGGWGMGIDRLTMFLTDNNN 544

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 545 IKEVLLFPAMKPD 557


>gi|254229663|ref|ZP_04923073.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262395206|ref|YP_003287060.1| lysyl-tRNA synthetase (class II) [Vibrio sp. Ex25]
 gi|151937784|gb|EDN56632.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338800|gb|ACY52595.1| lysyl-tRNA synthetase (class II) [Vibrio sp. Ex25]
          Length = 505

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 144 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRKAFIVRSKVMSAIRNFMISKQFMEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 204 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A+ V       + +          
Sbjct: 260 GLSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVAQEVLGSTSMPYGDETVEFGGTYT 319

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA  +Y  +      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 320 RMSMFEAIKQYNPDHAQIQALTEEDLQNRELMVSIAKSVHVEVEDFWTCGQLLEEIFGET 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 380 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 438 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 497

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 498 FPAMRPQ 504


>gi|253580947|ref|ZP_04858209.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847789|gb|EES75757.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 678

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 162/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R +  +  F+E+++ 
Sbjct: 177 LQILPEKFHGLTDTDMRYRQRYVDLIMNQDSKNVFIKRSQILKEIRNFLADRDFMEVETP 236

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 237 MLVANAGGAA-ARPFETHY---NALNEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 292

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+   ++ R  A +V      S+  +  +     E
Sbjct: 293 GVDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGSAKISYNGIEIDLSKPFE 352

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA ID        +  D       A +  I         DI +    E  
Sbjct: 353 RLTMNDAIKKYAGIDFD------EVADDEAAKKLADEHHIEYEERHKKGDIINLFFEEYC 406

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P+DP   +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 407 EKE--LIQPTFIMDHPIEISPLTKKKPSDPNKVERFELFINTWEMCNAYSELNDPIDQRE 464

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +         E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 465 RFKAQDALADAGDEEANHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLF 524

Query: 346 PFSQSN 351
           P  +S 
Sbjct: 525 PTMKSQ 530


>gi|167855466|ref|ZP_02478230.1| lysyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853395|gb|EDS24645.1| lysyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 500

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 164/364 (45%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     +++  YR+R              + R+ + S +R++F+E  FIE+++ 
Sbjct: 146 LRPLPNKHKGLTDQETRYRQRYLDLIANEESRRAFVIRSKVVSGIRQFFLEKDFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-AKPFITH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++       +     +     E
Sbjct: 262 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTTTVPYGEYVFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ EA  +Y N      +   D  D       A+   I +        I + I  E  
Sbjct: 322 RITMHEAIVKYGN-----GISMDDLHDFDKAVAIAKGLNIEIQKSWGLGSIVNAIFEEVA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 377 EHQ--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    D++F+  L   +P ++G  +G DRL M+   A +I +VI  
Sbjct: 435 RFQAQVAAKEAGDDEAMFYDDNFVVALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PAMR 498


>gi|238792835|ref|ZP_04636466.1| Lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238727943|gb|EEQ19466.1| Lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 507

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 159/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R + VE  F+E+++ 
Sbjct: 152 LRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFKVRSQVMSGIRSFMVEKGFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R     V    +  +     +      
Sbjct: 268 GVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTETVLGSSVVQYGEQTFDFGKPFA 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       A+  GI+V        +   I  E  
Sbjct: 328 KLTMKEAICKY-----RPETNVADLDDMDKALAIAESLGIKVEKSWGLGRVQCEIFEETA 382

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 383 ESH--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAQ 440

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+   +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 441 RFADQVSAKEAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 500

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 501 PAMRPVK 507


>gi|289208168|ref|YP_003460234.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943799|gb|ADC71498.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 496

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R  I   +REYF    FIE+++ 
Sbjct: 141 LRPLPEKFHGLTDQEQRYRQRYVDLITSPDSRELFRTRTRIVRYIREYFEREDFIEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F+T     + +  PLYL+ +PE   K+L+  G EK+F     +RN 
Sbjct: 201 MMQVIPGGAT-ARPFATH---HNALDMPLYLRIAPELYLKRLVVGGFEKVFEINRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A   Y  LM     ++R    +V       +Q    +      
Sbjct: 257 GLSTRHNPEFTMLEFYEAFVDYHALMDRTETLLRGLCEDVLGTTTIEYQGETYDFGQPFT 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV E     A +     + + D  D   +    ++  I +        +++ I     
Sbjct: 317 RMTVRE-----AILAHNPEISSEDLADIDKVRAHCERLEIPIKQSFGLGKLWTEIFEYTA 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFEL+    E+ N   EL DP +Q  
Sbjct: 372 ENK--LRHPTFITAYPTEVSPLARRNDDDPFVTDRFELFVGGREIANGFSELNDPEDQAE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ EK    +E    D D++  L   +P ++G  +G DRLVML+T + +I +V+  
Sbjct: 430 RFQAQVAEKDAGDDEAMHYDADYIRALEYGLPPTAGEGIGIDRLVMLLTNSPSIRDVLLF 489

Query: 346 PFSQSN 351
           P  +  
Sbjct: 490 PHLRPE 495


>gi|325104262|ref|YP_004273916.1| lysyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324973110|gb|ADY52094.1| lysyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 572

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 92/377 (24%), Positives = 165/377 (43%), Gaps = 36/377 (9%)

Query: 1   MHQIPS----------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR R                R+ + S++R YF  N
Sbjct: 141 LKPLPIVKRDDDGNIYDGFTDPEMRYRMRYVDLTVNPEYKEIFKTRSKVISTMRSYFDAN 200

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ   G     R F+T     + +  PL+L+ + E   K+L+ AG + ++ 
Sbjct: 201 GWMEVETPILQAIHGGAA-ARPFNT---YHNTLDMPLFLRIANELYLKRLIVAGFDGVYE 256

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVN 158
           F   +RN      H PEFT +E Y A++ Y  +M      +         +      N  
Sbjct: 257 FGKMFRNEGMDRTHNPEFTSMEIYVAYKDYIWMMGMVEECLEKVTMAIHGKTKIKVGNDE 316

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
                  E +++ ++  +Y  ID+          D   L       GI V        + 
Sbjct: 317 IEFAGPYEKLSMYDSIKKYTGIDVSKM-------DEGELIATCNNLGIEVDASMGKGKLV 369

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  +K+E N  +   T +  YP   + LA  +  +    +RFEL+    E+ NA  EL
Sbjct: 370 DAIFGDKVEHN--LIQPTFITDYPIEMTPLAKKHRTEDGLVERFELFVQGKEIANAYSEL 427

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            D I+Q+ RFE++++   +  +E   +D+DF+  L   MP ++G+ +G DRLVML+T  +
Sbjct: 428 NDAIDQKERFEEQLKLAARGDDEAMVMDDDFVRSLEYGMPPTAGLGIGIDRLVMLMTNQS 487

Query: 338 NINEVIWTPFSQSNQEE 354
           +I EV++ P  +  ++ 
Sbjct: 488 SIQEVLFFPQMRPEKKA 504


>gi|269103438|ref|ZP_06156135.1| lysyl-tRNA synthetase (class II) [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163336|gb|EEZ41832.1| lysyl-tRNA synthetase (class II) [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 500

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 155/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S++R + V   F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQEMRYRQRYVDLIVNDDSRKAFKIRSQVVSAIRSFMVTKGFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     ++   A  V       + +          
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYRDLMDLTEEMLSSIAIEVLGSSKMPYGDFEVEFAGPYT 314

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y  +      L      DR L+   A+   + V    T   +   I  E 
Sbjct: 315 RMSMLDAIKHYNPDHAEIQALTYEGVADRELMVKIAKSVHVDVEDFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPQ--LMQPTFITEYPADISPLARRNDENPFITDRFEFFIGGREVANGFSELNDAQDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 QRFKAQVDAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|323698049|ref|ZP_08109961.1| lysyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323457981|gb|EGB13846.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 502

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 157/367 (42%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +    +D    YR+R                R  I   LR    E  F+E+++ 
Sbjct: 146 MRPLPEKYHGLKDVETRYRQRYVDLIVTPRTKEIFQARTAIIRELRNILDEKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   LY++ +PE   K+LL  G E+++     +RN 
Sbjct: 206 MMQAIPGGAT-AKPFETH---HNALDMKLYMRIAPELYLKRLLVGGFERVYEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS--EP 165
                H PEFTMLE+Y A+  +  LM     I    AE                 +    
Sbjct: 262 GMDTQHNPEFTMLEFYWAYADFMDLMDLTEEIFSRIAEKVTGSTVVPYQGEMIDLTVGAW 321

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +   E+  +   +     +      D        ++ G +V   +    + +++    
Sbjct: 322 TRMPFHESLEKIGGVSPDVYM------DYDRCAAMVKEKGEKVITGEKLGKLQAKLFDLL 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +     +  YP   S L+     +P  T RFEL+    EL NA  EL DP++QR
Sbjct: 376 VEPR--LIQPHFIYHYPTDISPLSRRNEDNPDITDRFELFMTGRELANAFSELNDPVDQR 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE ++QEK+    E + +DED++  L   MP ++G  +G DRLVML+T + +I EVI 
Sbjct: 434 GRFEIQVQEKEAGDEEAHFMDEDYVRALEYGMPPAAGQGIGIDRLVMLLTDSASIREVIL 493

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 494 FPLLRPE 500


>gi|154274514|ref|XP_001538108.1| lysyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150414548|gb|EDN09910.1| lysyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 609

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 91/372 (24%), Positives = 158/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  RD    YR+R              + R+ + S +R +F E  F+E+++ 
Sbjct: 217 LHQIPSEHYGLRDQEQRYRQRYLDLIMNDRSRNVFVTRSKMISYIRRFFDERDFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++L+ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNTIAGGAT-AKPFITH---HNDLNMDMFLRVAPELYLKMLIVGGLERVYELGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     ++    +       +  +         N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDIMNVTEELVSGLVKHITGGYETTFHTQTGEEFKVNW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A          +            L    ++  I     +T + +  ++
Sbjct: 393 KAPWKRIEMIPALEEATGEKFPSGDQLHTMETNEFLKKLLKKVNIECTPPETNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +  +    +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEETC--INPTFITGHPQMMSPLAKYHRDNVGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQASQKAQGDDEAQLIDENFCTSLEFGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF +  +
Sbjct: 571 EVLAFPFMKEEK 582


>gi|325095996|gb|EGC49306.1| lysyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 609

 Score =  335 bits (860), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 91/372 (24%), Positives = 157/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  RD    YR+R              + R+ + S +R +F E  F+E+++ 
Sbjct: 217 LHQIPSEHYGLRDQEQRYRQRYLDLIMNDRSRNVFVTRSKMISYIRRFFDERDFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++L+ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNTIAGGAT-AKPFITH---HNDLNMDMFLRVAPELYLKMLIVGGLERVYELGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     ++    +       +  +         N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDIMNVTEELVSGLVKHITGGYETTFHTQAGEEFKVNW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                       L    ++  I     +T + +  ++
Sbjct: 393 KAPWKRIEMIPALEEATGEKFPPGDQLHTMETNEFLKKLLKKVNIECTPPETNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +  +    +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEETC--INPTFITGHPQMMSPLAKYHRDNVGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQASQKAQGDDEAQLIDENFCTSLEFGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF +  +
Sbjct: 571 EVLAFPFMKEEK 582


>gi|315127589|ref|YP_004069592.1| lysyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315016103|gb|ADT69441.1| lysyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 511

 Score =  335 bits (860), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 89/378 (23%), Positives = 161/378 (42%), Gaps = 30/378 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ +   +R +  +  F+E+++ 
Sbjct: 139 LRPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 199 MLQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------- 157
                H PEFTM+E+Y+A+  Y  LM    +++R  A                       
Sbjct: 255 GLSTRHNPEFTMIEFYQAYADYIDLMNITEDMLRTVATNVLGSPIVVNTTKDENGDVVDS 314

Query: 158 -NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              +       +++++A  +Y N +    + N  +     L   A+Q  +++  +  W  
Sbjct: 315 VEYDFGQPFTRLSMSDAILKY-NPEFDAAVFNDPENHFEELKAYAKQVHVKIPENCVWGP 373

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
                 I +      +   T +  YP   S LA     +P  T RFE +    EL N   
Sbjct: 374 GKFLCEIFEETAEHMLIQPTFITGYPWEVSPLARRNDENPFVTDRFEFFVGGRELANGFS 433

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL D  +Q  RF ++++EK    +E    DED++  L   +P ++G  +G DRLVML T 
Sbjct: 434 ELNDAQDQAERFTRQVEEKDAGDDEAMHYDEDYIRALEYGLPPTAGEGIGIDRLVMLFTD 493

Query: 336 ANNINEVIWTPFSQSNQE 353
           ++ I +VI  P  +   +
Sbjct: 494 SSTIKDVILFPHMRPQAD 511


>gi|301156452|emb|CBW15923.1| lysine tRNA synthetase, inducible [Haemophilus parainfluenzae T3T1]
          Length = 502

 Score =  335 bits (860), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 100/364 (27%), Positives = 167/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     D    YR+R              + R+ + + +RE+F+   F+E+++ 
Sbjct: 146 LRPLPNKFHGLTDMEARYRQRYLDLISNEESRRTFIIRSKVIAGIREFFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFITH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  + ++  +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    D+DF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|269964523|ref|ZP_06178763.1| lysyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269830760|gb|EEZ84979.1| lysyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 505

 Score =  335 bits (860), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 165/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 144 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMSAIRNFMISKQFMEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 204 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A+ V       + +          
Sbjct: 260 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVAQEVLGSTSMPYGDETVEFGGTYT 319

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y  +      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 320 RMSMFEAIKHYNPDHAQIQALTEEDLQNRDLMVSIAKSVHVEVEPFWTCGQLLEEIFGET 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 380 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 438 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 497

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 498 FPAMRPQ 504


>gi|311693659|gb|ADP96532.1| lysyl-tRNA synthetase [marine bacterium HP15]
          Length = 511

 Score =  335 bits (860), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 159/378 (42%), Gaps = 35/378 (9%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D   R              R     R+ I S++R+YF +  F+E+++ 
Sbjct: 138 LRPLPEKHKGLTDTEARYRHRYVDLMVNEDSRRVFYARSKIISAMRQYFTDRDFMEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 198 MLQVIPGGAT-ARPFVTH---HNALGIDMYLRIAPELFLKRLVVGGFERVFEINRNFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF----------SFQNV 157
                H PEFTM+E+Y+A+  Y  LM    +++R   +                 S + V
Sbjct: 254 GLSTRHNPEFTMVEFYQAYADYNDLMDLTEDMLRTITQKVLGTTTVVNSRTLADGSEETV 313

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +     E +TV +A  RY        +      D       A+  GI +        +
Sbjct: 314 EYDFGKTFERLTVVDAILRY-----NPDIKPEQLADDASARQVAKDLGIHLKEGWGLGKV 368

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I     E    +   T +  YP   S LA    ++P  T+RFE +    E+ N   E
Sbjct: 369 QIEIFEATAEHR--LMQPTFITEYPKEVSPLARCKDSNPFVTERFEFFVGGREIANGFSE 426

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L D  +Q  RF+ ++ EK    +E    DED++  L   +P ++G  +G DRL ML+T +
Sbjct: 427 LNDAEDQAERFQAQVAEKDAGDDEAMFYDEDYVMALEYGLPPTAGEGIGIDRLAMLLTNS 486

Query: 337 NNINEVIWTPFSQSNQEE 354
            +I +VI  P  +   + 
Sbjct: 487 PSIRDVILFPAMRPEHKA 504


>gi|269959606|ref|ZP_06173987.1| lysyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269835664|gb|EEZ89742.1| lysyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 510

 Score =  335 bits (860), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMSAIRNFMISKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +            
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEDTVEFGGTYT 324

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y  +      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 325 RMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 443 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 502

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 503 FPAMRPQ 509


>gi|254781066|ref|YP_003065479.1| putative lysyl-tRNA synthetase protein [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040743|gb|ACT57539.1| putative lysyl-tRNA synthetase protein [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 355

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 355/355 (100%), Positives = 355/355 (100%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR
Sbjct: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML
Sbjct: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI
Sbjct: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR
Sbjct: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN
Sbjct: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
           ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI
Sbjct: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355


>gi|37522925|ref|NP_926302.1| lysyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|39932049|sp|Q7NG18|SYK_GLOVI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|35213927|dbj|BAC91297.1| lysyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 497

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 157/367 (42%), Gaps = 27/367 (7%)

Query: 3   QIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +PS+ +   D    YR+R               KR +I   +R +  E  F+EI++  L
Sbjct: 143 PLPSEYYGLTDVQKRYRQRYLDLIANPGVRETFRKRALIVREIRRFLDERGFLEIETPVL 202

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G     R F+T     + +   ++L+ + E   K+L+  G EK++     +RN   
Sbjct: 203 QTEAGGAA-ARPFTTH---HNALGLDMFLRIATELHLKRLVVGGFEKVYELGRIFRNEGI 258

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E Y A+  Y  +M     ++R  A +         +    +  +    I
Sbjct: 259 STRHNPEFTTVEIYEAYSDYFDIMDLVETLLRAVAHIVLGSTELVCEGNTIDLGAPFRRI 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T+ +  A+   +            D       A+  G+ V    +   I  ++  EK E 
Sbjct: 319 TMFDLVAQMTGV------ALAGLRDGEKAARLAEAVGVEVTAGASVGQILYQLFEEKCEA 372

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP   S LA  + + P   +RFELY    E  +   EL DP++QR R 
Sbjct: 373 K--LTQPTFVLDYPVEISPLAKAHRSVPNMVERFELYINGRETADGFSELNDPVDQRARL 430

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E + + K     E +P DEDFL  +   +P + G+ +G DRLVML+T + +I +VI  P 
Sbjct: 431 EAQAKAKAAGDLEAHPFDEDFLTAIEHGLPPTGGVGIGIDRLVMLLTDSPSIRDVIAFPT 490

Query: 348 SQSNQEE 354
            +    E
Sbjct: 491 LRPEAGE 497


>gi|332346138|gb|AEE59472.1| lysyl-tRNA synthetase LysS [Escherichia coli UMNK88]
          Length = 505

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++ + +G DR++ML T ++ I +VI  
Sbjct: 439 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAVLGIGIDRMIMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPQK 505


>gi|308048395|ref|YP_003911961.1| lysyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630585|gb|ADN74887.1| lysyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 493

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + +++R+Y  +  F+E+++ 
Sbjct: 138 LRPLPEKFHGLTDQEQRYRQRYVDLIVNEESRNTFKVRSKVIAAIRQYMTDRDFMEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + + + +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 198 MMQVIPGGAS-ARPFITH---HNALDQDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    +++R    +V       +     +  +   
Sbjct: 254 GLSPRHNPEFTMMEFYMAYADYRDLMDLTEDMLRTVTEQVLGSAKVKYGEEEFDFGAPFA 313

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA  +Y        +              A+   I V        + + I  E  
Sbjct: 314 RMSMREAILKY-----NPEVTLEMLSTFESACEVAKDLKIEVEKSWGLGRVITEIFEETA 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q+ 
Sbjct: 369 EHR--LIQPTFITEYPAEVSPLARRNDDNPEITDRFEFFVGGREIANGFSELNDAEDQKQ 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++ K+   +E    D D++  L   +P ++G  +G DRLVML T ++ I +VI  
Sbjct: 427 RFLDQVKAKESGDDEAMFFDGDYVTALEHGLPPTAGQGIGIDRLVMLFTDSHTIRDVILF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PAMRPQ 492


>gi|150006587|ref|YP_001301331.1| lysyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|166229794|sp|A6L7P5|SYK_BACV8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|149935011|gb|ABR41709.1| lysyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 576

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 97/359 (27%), Positives = 164/359 (45%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              +KR+ + SS+REYF    ++E+++  LQ   G 
Sbjct: 157 DKFEDPELRYRQRYVDLAVNEEIKDIFIKRSKVYSSMREYFNSKGYMEVETPILQSIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
               R F T     + +  PLY++ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AA-ARPFITH---HNALDMPLYMRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y A++ Y  +M+    +I     +V         +   +  +  + +T+ ++ 
Sbjct: 273 EFTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTQVKVGDNIIDFKAPYKRVTMLDSI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             +   DL          +   +    Q+  + +        +   I  E  E       
Sbjct: 333 KEHTGYDLTGM-------NEEQIREVCQKLNMEIDDTMGKGKLIDEIFGEFCEGTY--IQ 383

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L  I+ ++P  T+RFEL     ELCNA  EL DPI+Q  RFE++M+ 
Sbjct: 384 PTFITDYPKEMSPLTKIHRSNPDLTERFELMVNGKELCNAYSELNDPIDQLERFEEQMKL 443

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DF+  L   MP +SG+ +G DRL ML+TG + I EV++ P  +  +
Sbjct: 444 SEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQMRPEK 502


>gi|87123221|ref|ZP_01079072.1| Lysyl-tRNA synthetase, class-2:tRNA synthetases, class II
           [Synechococcus sp. RS9917]
 gi|86168941|gb|EAQ70197.1| Lysyl-tRNA synthetase, class-2:tRNA synthetases, class II
           [Synechococcus sp. RS9917]
          Length = 501

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 90/370 (24%), Positives = 155/370 (41%), Gaps = 21/370 (5%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R ++ S++R +  +  F+EI++ 
Sbjct: 134 LQPLPDKWHGLADVEKRYRQRYLDLIVSPQSRETFRRRALMVSAIRRWLDDRDFLEIETP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+L+  G E+++     +RN 
Sbjct: 194 VLQAEAGGA-EARPFITH---HNTLDLPLYLRIATELHLKRLVVGGFERVYELGRIFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +I     ++      ++Q    +      
Sbjct: 250 GVSTRHNPEFTSVEVYQAYADYVDMMNLTEQLIASVTEQICGTTRITYQGTAVDLTPPWR 309

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ E       +D                   A          D+   + +    +++
Sbjct: 310 RATMHELVQEATGLDFTAFTGPGAAGRDAAAAAMAAAGLEVPDAADSVGRLLNEAFEQRV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL+DP++QR 
Sbjct: 370 EAT--LIQPTFVIDYPIEISPLARKHRSKPGLVERFELFIVGRETANAFSELIDPLDQRQ 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R E +   +    +E + +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI  
Sbjct: 428 RLEDQQARRAAGDDEAHGVDEDFLQALEVGMPPTGGLGIGIDRLVMLLTDSASIRDVIAF 487

Query: 346 PFSQSNQEEI 355
           P  +     +
Sbjct: 488 PLLRPEARPV 497


>gi|87120695|ref|ZP_01076588.1| lysyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86163923|gb|EAQ65195.1| lysyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 499

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 164/364 (45%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ I S++R +  + +F E+++ 
Sbjct: 144 LRPLPDKHKGLADMETRYRQRYVDLIVNEESRKTFQMRSQIVSTIRRFLEDRRFTEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 204 MMQTIPGGAS-ARPFVTH---HNAMDMQMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    +++R  A +V      ++Q    +  +   
Sbjct: 260 GVSTRHNPEFTMIEFYQAYADYKDLMDLTEDMLRDVAEKVLGTTKVTYQGSEYDFGAPFI 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E+   +        L   D          A++ GI+V        + + I  E  
Sbjct: 320 RMTMVESILHF-----NPELTEADISTLEAATEVAKKLGIQVKPIWGLGKLQTEIFEETA 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    ++  T +  YPA  S LA     +P  T RFE +    E+ N   EL DP +Q  
Sbjct: 375 ESK--LDQPTFITAYPAEVSPLARRNDDNPFITDRFEFFVGGREIANGFSELNDPEDQAD 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K++ EK    +E    D D++  L   +P ++G  +G DRLVML T A +I +VI  
Sbjct: 433 RFNKQVAEKDAGDDEAMHFDADYINALEHGLPPTAGEGIGIDRLVMLFTDAPSIRDVILF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PHMR 496


>gi|23270695|gb|AAH35324.1| Kars protein [Mus musculus]
          Length = 622

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 235 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETP 294

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 295 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 350

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 351 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGQAYEV 410

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 411 DFTPPFRRISMVEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLD 470

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 471 KLVGEFLEVTC--ISPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 528

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 529 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 588

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 589 IKEVLLFPAMKPEDKK 604


>gi|127511746|ref|YP_001092943.1| lysyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166229827|sp|A3QB36|SYK_SHELP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126637041|gb|ABO22684.1| lysyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 500

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 87/367 (23%), Positives = 162/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + +++R + V  +F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQETRYRQRYVDLIVNEESRAAFIMRSKVVTAIRNFMVSKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHSIPGGAS-ARPFITH---HNALDIEMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A ++       +     +     E
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIAKDLLGDTKLPYGEHTIDFGGPYE 314

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y  + +   ++   +  D   +   A+  G+ +    T   +   I  E 
Sbjct: 315 RLSMLDAIKKYNPDNETIQSMTYEEVKDVEFMRNLAKSLGMTIEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPK--LMQPTFITGYPADISPLARRNDENHFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 KRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|292487147|ref|YP_003530017.1| lysyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|291552564|emb|CBA19609.1| lysyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 506

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 164/368 (44%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R + V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDDSRNTFKVRSQIMAGIRNFMVGRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MMQAIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  YE L++   ++ R  A+ V    +  + +   +      
Sbjct: 266 GISPRHNPEFTMMELYMAYADYEDLIELTESLFRTLAQNVLGSTLVPYGDQQFDFGQPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  D       AQ  GI V        + + I  E  
Sbjct: 326 KLTMKEAILKY-----RPQTDLADLADFDKSVAIAQSLGINVEKSWGLGRVVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           + +  +   T +  YPA  S LA     DP  T RFE +  + E+ N   EL D  +Q  
Sbjct: 381 KEH--LIQPTFITEYPAEVSPLARRNDVDPEITDRFEFFIGDREIGNGFSELNDAQDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 499 PALRPGSK 506


>gi|193212439|ref|YP_001998392.1| lysyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|238692632|sp|B3QMN9|SYK_CHLP8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193085916|gb|ACF11192.1| lysyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 511

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 100/377 (26%), Positives = 172/377 (45%), Gaps = 39/377 (10%)

Query: 1   MHQIPSQP-------------WWNRDFHYRRR-----------PFLLKRNMIQSSLREYF 36
           +  IP                + +R+  YR+R              +KR  I + +R YF
Sbjct: 148 LRPIPIAKEKEVDGEKVVYDAFADRELRYRQRYVDLIVNPEVRDTFIKRTKIVALMRNYF 207

Query: 37  VENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
             N ++E+++  LQ   G     R F+T     + +   LYL+ + E   K+L+  G + 
Sbjct: 208 ASNGWLEVETPILQPIYGGAA-ARPFTTH---HNALDMQLYLRIANELYLKRLIVGGFDG 263

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQ- 155
           ++ FA  +RN      H PEFT +E Y A++ Y  +M+   +++  A    N K  +   
Sbjct: 264 VYEFAKDFRNEGIDRFHNPEFTQVELYVAYKDYVWMMELVEDLLHKACVEVNGKDSTMFL 323

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
               N       +T+A++   Y  +++              L   A+  G+ +    +  
Sbjct: 324 GNEINLKPPFRRLTIADSIKEYTGMEIRD-------KSEAQLRDIAKDLGLELDPKISSG 376

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            I   I  E +EP   +   T +  YP   S LA  + ++P   +RFEL     E+CN+ 
Sbjct: 377 KIIDEIFGEFVEPK--LIQPTFITDYPEEMSPLAKKHRSEPGLVERFELIVGGKEVCNSF 434

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP+ QR R E++ + +++  +E   +DEDFL  L   MP  +G+ +G DR+VML+T
Sbjct: 435 SELNDPVIQRERLEEQARLRQRGDDEAMIVDEDFLRALEYGMPPCAGLGIGIDRMVMLLT 494

Query: 335 GANNINEVIWTPFSQSN 351
           G ++I +VI+ P  +  
Sbjct: 495 GEDSIRDVIFFPHMKPE 511


>gi|209694158|ref|YP_002262086.1| lysyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|226710881|sp|B6EMX2|SYK_ALISL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|208008109|emb|CAQ78251.1| lysyl-tRNA synthetase, heat inducible [Aliivibrio salmonicida
           LFI1238]
          Length = 501

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 91/367 (24%), Positives = 157/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + V+  F+E+++ 
Sbjct: 140 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRTAFIIRSKVVSAIRNFMVDKGFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 200 MMHVIPGGAS-ARPFVTH---HNALDVDMYLRVAPELYLKRLVVGGFERVFEINRNFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     ++   A  V       +     +   +  
Sbjct: 256 GLSPRHNPEFTMMEFYMAYADYNDLMDLTEAMLSQVAISVLGSDKMPYGEYTVDFGGKYA 315

Query: 167 YITVAEAFARYANIDLGTTLDNPD-QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y            D   DR L+   A+   + V    T   +   I  E 
Sbjct: 316 RLSMLDAIKMYNPEHAEIQALTYDGVQDRDLMVSIAKSVHVEVESFWTCGQLLEEIFGET 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 376 AEPK--LMQPTFITEYPADISPLARRNDNNAFITDRFEFFIGGREVANGFSELNDAQDQD 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K+   +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 434 ERFKAQVSAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 493

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 494 FPSMRPQ 500


>gi|261867764|ref|YP_003255686.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413096|gb|ACX82467.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 502

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFLSKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A  +    I  + ++  +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAINILGTTIVKYGDLEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---AEKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQND 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVIALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|332534753|ref|ZP_08410581.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035840|gb|EGI72324.1| lysyl-tRNA synthetase, class II [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 511

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 91/378 (24%), Positives = 162/378 (42%), Gaps = 30/378 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ +   +R +  +  F+E+++ 
Sbjct: 139 LRPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 199 MLQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------- 157
                H PEFTM+E+Y+A+  Y  LM    +++R  AE                      
Sbjct: 255 GLSTRHNPEFTMIEFYQAYADYIDLMNITEDMLRTVAENVLGSAIVVNTTKDENGEVIDS 314

Query: 158 -NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              +       +++A+A  +Y N +    + N  +     L   A+Q  +++  +  W  
Sbjct: 315 VEYDFGQPFTRLSMADAILKY-NPEFDAAVFNDPENHFEELKAYAKQVHVKIPENCVWGP 373

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
                 I +      +   T +  YP   S LA     +P  T RFE +    EL N   
Sbjct: 374 GKFLCEIFEETAEHMLIQPTFITGYPWEVSPLARRNDENPFVTDRFEFFVGGRELANGFS 433

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL D  +Q  RF ++++EK    +E    DED++  L   +P ++G  +G DRLVML T 
Sbjct: 434 ELNDAQDQAERFTRQVEEKDAGDDEAMHYDEDYIRALEYGLPPTAGEGIGIDRLVMLFTD 493

Query: 336 ANNINEVIWTPFSQSNQE 353
           ++ I +VI  P  +   +
Sbjct: 494 SSTIKDVILFPHMRPQAD 511


>gi|28897287|ref|NP_796892.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839370|ref|ZP_01992037.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260363583|ref|ZP_05776403.1| lysine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876252|ref|ZP_05888607.1| lysine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260896430|ref|ZP_05904926.1| lysine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|31340436|sp|Q87SB1|SYK_VIBPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28805496|dbj|BAC58776.1| lysyl-tRNA synthetase, heat inducible [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149747118|gb|EDM58106.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308088407|gb|EFO38102.1| lysine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308092867|gb|EFO42562.1| lysine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308113326|gb|EFO50866.1| lysine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328472051|gb|EGF42928.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 505

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 165/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 144 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMSAIRNFMISKQFMEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 204 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +         +  
Sbjct: 260 GLSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVALEVLGSTSMPYGEDTVEFGGKYA 319

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y  +      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 320 RMSMFEAIKHYNPDHAQIQALTEEDLQNRELMVSIAKSVHVEVEPFWTCGQLLEEIFGET 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 380 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 438 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 497

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 498 FPAMRPQ 504


>gi|301784689|ref|XP_002927769.1| PREDICTED: lysyl-tRNA synthetase-like [Ailuropoda melanoleuca]
          Length = 597

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 210 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRTFLDELGFLEIETP 269

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 270 MMNVIPGGAV-AKPFIT---YHNELDMNLYMRVAPELYHKILVVGGIDRVYEIGRQFRNE 325

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +           
Sbjct: 326 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVQHITGSYKVTYHPDGPEGEAFEI 385

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 386 DFTPPFRRISMVEELEKVLGVKLPETKLFETEETRKILDDLCVARAVECPPPRTTARLLD 445

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 446 KLVGEFLETTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFIMKKEICNAYTELN 503

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE++   L   +P ++G  MG DR+ M +T +NN
Sbjct: 504 DPVRQRELFEEQAKAKAAGDDEAMFIDENYCTALEYGLPPTAGWGMGIDRITMFLTDSNN 563

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 564 IKEVLLFPAMKPEDKK 579


>gi|266624958|ref|ZP_06117893.1| lysine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288863147|gb|EFC95445.1| lysine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 597

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 167/365 (45%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I  ++R++  +  F+E+++ 
Sbjct: 144 LQILPEKFHGLTNTDLRYRQRYVDLVMNPEVRDTFVKRSQIIKAIRDHLDDQGFMEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 204 MLVANAGGAA-ARPFETHY---NALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    ++ R  A +V    + ++  V  +     E
Sbjct: 260 GVDTRHNPEFTLMELYQAYTDYHGMMDLVEDLFRSVALKVLGTAVVTYDGVEIDLSKPFE 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y  ID      + +          A Q  I+        DI S +  E +
Sbjct: 320 RITMVDALKKYKGIDFTEIHTDEE------AKALADQYHIQYEARHKKGDILSMLFEEFV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P DP +T+RFEL+    E+ NA  EL DPI+QR 
Sbjct: 374 EEH--LVQPTFIMDHPVEISPLTKRKPDDPDYTERFELFITKREMANAYSELNDPIDQRV 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +   K     E   +DEDFL  L   MP + GI +G DR VML+T +  I +V+  
Sbjct: 432 RFEAQEVLKAAGDEEANSMDEDFLNALMIGMPPTGGIGIGIDRFVMLLTDSYAIRDVLLF 491

Query: 346 PFSQS 350
           P  +S
Sbjct: 492 PTMKS 496


>gi|195392834|ref|XP_002055059.1| GJ19167 [Drosophila virilis]
 gi|194149569|gb|EDW65260.1| GJ19167 [Drosophila virilis]
          Length = 580

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 157/374 (41%), Gaps = 28/374 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R                R  I S +R++     F+EI++ 
Sbjct: 195 LHMLPHLHFGLKDKETRYRQRYLDLILNSKVRENFQIRAKIISYVRQFLDRLGFLEIETP 254

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+++ +PE   K L+  G ++++     +RN 
Sbjct: 255 MMNMIAGGAT-AKPFVTH---HNELKMDLFMRIAPELYHKMLVVGGMDRVYEIGRQFRNE 310

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  L++    +I    +  +       +           
Sbjct: 311 GIDMTHNPEFTTCEFYMAYADYYDLIEITEQMISGMVKAIHGSYKIKYHPDGPDGVEQEL 370

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +       +   +            L     +  +      T + +  
Sbjct: 371 DFTPPFKRVSMIKTLEEKLQVKFPSADTFNSPETNAFLSQLCIKHQVECPAPRTTARLLD 430

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ + IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 431 KLVGDFIEETC--INPTFICEHPQIMSPLAKYHRSVPGLTERFELFVAKKEVCNAYTELN 488

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 489 DPVVQRERFEQQASDKAAGDDEAQMVDENFCTALEYGLPPTGGWGMGIDRLTMFLTDSNN 548

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 549 IKEVLLFPAMKPEE 562


>gi|149910166|ref|ZP_01898812.1| lysyl-tRNA synthetase [Moritella sp. PE36]
 gi|149806752|gb|EDM66716.1| lysyl-tRNA synthetase [Moritella sp. PE36]
          Length = 502

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 164/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + +++R + V   ++E+++ 
Sbjct: 139 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEESRNAFIVRSKLVTAIRNFMVSKDYMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + + + +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 199 MMHVIPGGAT-ARPFITH---HNALDQAMYLRVAPELYLKRLVVGGFDRVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM     ++   A EV       + +       +  
Sbjct: 255 GLSPRHNPEFTMMEFYQAYADYNDLMDFTEEMLSTVAVEVLGATAMPYGDHMVEFGGKYT 314

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +A  +Y    ++   L N    DR L+   A+   +++    T   +   I  E 
Sbjct: 315 RISMLDAIKQYNPEHEVIQALTNEGVQDRELMVSIAKSLNMKIEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPQ--LIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRL ML T  + I +VI 
Sbjct: 433 ARFKAQVNAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|260902719|ref|ZP_05911114.1| lysine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308107650|gb|EFO45190.1| lysine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 505

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 165/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 144 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFVVRSKVMSAIRNFMISKQFMEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 204 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +         +  
Sbjct: 260 GLSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVALEVLGSTSMPYGEDTVEFGGKYA 319

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y  +      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 320 RMSMFEAIKHYNPDHAKIQALTEEDLQNRELMVSIAKSVHVEVEPFWTCGQLLEEIFGET 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 380 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 438 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 497

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 498 FPAMRPQ 504


>gi|195963321|ref|NP_001124340.1| lysyl-tRNA synthetase isoform 1 [Mus musculus]
 gi|20072717|gb|AAH27356.1| Kars protein [Mus musculus]
 gi|148679577|gb|EDL11524.1| mCG141545, isoform CRA_a [Mus musculus]
          Length = 624

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 237 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETP 296

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 297 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 352

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 353 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGQAYEV 412

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 413 DFTPPFRRISMVEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLD 472

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 473 KLVGEFLEVTC--ISPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 530

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 531 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 590

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 591 IKEVLLFPAMKPEDKK 606


>gi|163803525|ref|ZP_02197394.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159172660|gb|EDP57513.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 510

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 165/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMSAIRNFMISKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A+ V       + +          
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSIAQEVLGSTSMPYGDDTVEFGGTYT 324

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y  +      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 325 RMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVEPFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 443 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTDTHTIRDVIL 502

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 503 FPAMRPQ 509


>gi|149371919|ref|ZP_01891238.1| lysyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149355059|gb|EDM43620.1| lysyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 563

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 99/379 (26%), Positives = 168/379 (44%), Gaps = 37/379 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R               KR  + +++R +F E 
Sbjct: 136 LKPLPLPKTDAEGKTYDEFNDPELRYRQRYVDLVVNPKVKEVFKKRTKLFNAMRTFFNER 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            + E+++  LQ   G     R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 196 DYFEVETPILQPIAGGAA-ARPFITH---HNSLDIPLYMRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVN 158
           F+  +RN      H PEFT +E Y +++ Y  +M  C  ++   A   N    + F    
Sbjct: 252 FSKNFRNEGMDRTHNPEFTAMEIYVSYKDYNWMMDFCEQLLEFCAIQVNGTSKTTFGEHE 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    +T+A++   +   D+              L   A+  GI V +      + 
Sbjct: 312 IDFKAPYARVTMADSIKHFTGFDITG-------KSEDELRAAAKDMGIAVDNTMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGEKCEGNY--IQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPI+QR RFE +++  +K  +E    ID DFL  L   MP +SG+ +G DRL+M +T  
Sbjct: 423 NDPIDQRERFEAQLKLAEKGDDEATAFIDHDFLRALEYGMPPTSGMGIGMDRLIMYLTNN 482

Query: 337 NNINEVIWTPFSQSNQEEI 355
            +I EV++ P  +  ++ +
Sbjct: 483 PSIQEVLFFPQMRPEKKAV 501


>gi|226324189|ref|ZP_03799707.1| hypothetical protein COPCOM_01968 [Coprococcus comes ATCC 27758]
 gi|225207738|gb|EEG90092.1| hypothetical protein COPCOM_01968 [Coprococcus comes ATCC 27758]
          Length = 650

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 163/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I +++R+Y     F+E+++ 
Sbjct: 145 LQILPEKFHGLTNTDTRYRQRYVDLIMNPEVKDTFIKRSKILTAIRKYLGNEGFMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + L L+ S E   K+L+  G E+++     +RN 
Sbjct: 205 MLVQNAGGAA-ARPFETHF---NALNEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V       ++ +  +     E
Sbjct: 261 GLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRFVAQEVLGTTQIVYKGIEMDLGKPFE 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D        +          A+   +         DI +    E +
Sbjct: 321 RITMVDAVKKYAGVDWN------EVETLEQARELAKAHNLEFEERHKKGDILNLFFEEYV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 375 EEH--LLQPTFVMDHPVEISPLTKKKPENPDYVERFEFFMNGWEMANAYSELNDPIDQRE 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +  +E    DEDF+  L   MP + GI  G DR+ ML+TGA  I +V+  
Sbjct: 433 RFKAQEELLAQGDDEANTTDEDFMNALEIGMPPTGGIGFGIDRMCMLLTGAEAIRDVLLF 492

Query: 346 PFSQS 350
           P  +S
Sbjct: 493 PTMKS 497


>gi|33864663|ref|NP_896222.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|39932070|sp|Q7U9X5|SYK_SYNPX RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33632186|emb|CAE06642.1| lysyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 502

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 154/367 (41%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  + S +R +  +  F+EI++ 
Sbjct: 138 LQPLPDKWHGLADVEKRYRQRYLDLIVSPDSRETFRRRARLVSGIRRWLDQRDFLEIETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +  PL L+ + E   K+L+  G E+++     +RN 
Sbjct: 198 VLQSEPGGA-DARPFETH---HNALDLPLTLRIATELHLKRLVVGGFERVYELGRIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M+    ++     EV      ++Q+   +      
Sbjct: 254 GVSTRHNPEFTSVEIYQAYSDYIGMMELTEQMVSAVCQEVCGSCQITYQDTEIDLSPPWR 313

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEK 225
             T+ E       +D  +         R    +     G+      D+   + +    + 
Sbjct: 314 RATMHELVEEATGLDFNSFSS------REAAAVAMTGKGLHAPELADSVGRLLNEAFEQA 367

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL DP++QR
Sbjct: 368 VETT--LIQPTFVTDYPVEISPLARPHRSKPGLVERFELFIVGREHANAFSELTDPVDQR 425

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   K     E   +DEDF+  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 426 QRLEAQQARKAAGDLEAQGLDEDFVTALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 485

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 486 FPLLRPE 492


>gi|223042067|ref|ZP_03612243.1| lysyl-tRNA synthase [Actinobacillus minor 202]
 gi|223017142|gb|EEF15578.1| lysyl-tRNA synthase [Actinobacillus minor 202]
          Length = 501

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 99/364 (27%), Positives = 163/364 (44%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     +++  YR+R              + R+ + S +R++F+E  FIE+++ 
Sbjct: 146 LRPLPNKVQGITDQEIRYRQRYLDLISNEESRRTFMIRSQVVSGIRQFFLERGFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++       +     +     E
Sbjct: 262 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTTDVPYGEYVFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ EA  +Y N      +   D  D       A+   I +        I + I  E  
Sbjct: 322 RITMHEAIVKYGN-----GISMEDLHDFDKAVAIAKGLHIEIQKSWGLGSIVNAIFEEVA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 377 EHQ--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DEDF+  L   +P ++G  +G DRL M+   A +I +VI  
Sbjct: 435 RFDAQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PAMR 498


>gi|194476928|ref|YP_002049107.1| lysyl-tRNA synthetase [Paulinella chromatophora]
 gi|171191935|gb|ACB42897.1| lysyl-tRNA synthetase [Paulinella chromatophora]
          Length = 519

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 154/368 (41%), Gaps = 24/368 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +     D    YR+R             L +R  + S +R +  E +F+EI++ 
Sbjct: 141 LHPLPDKWHGLADVEKRYRQRYLDLIVSPQTRETLRRRAQVVSGIRRWLDEREFLEIETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T+    + +  PLYL+ + E   K+L+  G E+++     +RN 
Sbjct: 201 VLHVEAGGA-EARPFITQ---HNTLDLPLYLRIATELHLKRLVVGGFERVYELGRIFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +I   A +V       +Q    +      
Sbjct: 257 GVSSRHNPEFTSVEIYQAYADYTDMMDLTEQLIDTIANQVCGTSKIEYQEEIIDLTPPWR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ E       +D     D     +   L         ++    +   + + I    +
Sbjct: 317 RATMHELVKEATGLDFTLFSDYETASEAITLSGIMLS---KLDAQSSVGHLLNYIFENAV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA  +       +RFEL+    E  NA  EL+DPI+QR 
Sbjct: 374 EHT--LIQPTFVTDYPIEISPLARKHRNKSGLVERFELFIVGRETANAFSELIDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R E +   ++    E   IDEDFL  L   MP + G+ +G DRL ML+T + +I +VI  
Sbjct: 432 RLEAQQLRRQAGDLEANMIDEDFLQALEVGMPPTGGLGIGIDRLTMLLTNSPSIRDVIAF 491

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 492 PLLKPESQ 499


>gi|291277327|ref|YP_003517099.1| lysyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964521|emb|CBG40374.1| lysyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 502

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 97/362 (26%), Positives = 159/362 (43%), Gaps = 26/362 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R                R+ I S++R +F    F+E+++  L
Sbjct: 141 PLPEKFHGITDIELRYRQRYLDLIMNKEVKETFKLRSKIVSAVRRFFESKGFLEVETPML 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    +L+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFITH---HNALNVDRFLRIAPELYLKRLIVGGFEAVFEMNRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+++Y+ L+           +          N     FS+ + I 
Sbjct: 257 DHSHNPEFTMIEFYWAYKTYKDLIVLTKEFFTYLLDTLGLPTKIHYNDQEIDFSDFKVIG 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A  +  N+            D+H L    Q+ GI++     +  + S      +E  
Sbjct: 317 YKDALEKIGNLPRAV------LEDKHSLRDFLQKQGIKLEAQMGYGKLLSEAFDTFVEHK 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  YP   S LA     +P+   RFEL+    E+ N   EL DPI+Q  RF+
Sbjct: 371 --LIHPTFITDYPIDISPLARRNDQNPQIADRFELFIGGKEISNGFSELNDPIDQFERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++++EK     E   +DED++  L   MP ++G  +G DRL+ML TGA  I +VI  P  
Sbjct: 429 QQVREKDAGDEEAQYMDEDYVWALGYGMPPTAGQGIGIDRLIMLFTGAKTIKDVILFPAM 488

Query: 349 QS 350
           + 
Sbjct: 489 KP 490


>gi|331083387|ref|ZP_08332499.1| hypothetical protein HMPREF0992_01423 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330404080|gb|EGG83628.1| hypothetical protein HMPREF0992_01423 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 650

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 158/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I +S+R Y     F+E+++ 
Sbjct: 142 LKPLPEKFHGLTNTDLRYRQRYVDLIMNADVKDTFIKRSKIIASIRNYLNGQGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G E+++     +RN 
Sbjct: 202 MLVANAGGAA-ARPFETHF---NALDEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V       +  +  +     E
Sbjct: 258 GLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRHVAQEVLGTTKIVYNGIEMDLGKPFE 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D                   A++  +         DI S    E  
Sbjct: 318 RITMVDAVKKYAGVDFNEIHT------LEEARAVAKEHHVEFEERHKKGDILSLFFEEFA 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFE +    E+ NA  EL DPI+QR 
Sbjct: 372 EEH--LIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDF+  L   M  + GI  G DR+VML+T +  I +V+  
Sbjct: 430 RFKAQEELLAQGDEEANTTDEDFMNALEIGMAPTGGIGFGIDRMVMLLTDSAAIRDVLLF 489

Query: 346 PFSQS 350
           P  +S
Sbjct: 490 PTMKS 494


>gi|327403364|ref|YP_004344202.1| Lysyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318872|gb|AEA43364.1| Lysyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 566

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 100/376 (26%), Positives = 170/376 (45%), Gaps = 37/376 (9%)

Query: 1   MHQIPS----------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P+            + N +  YR+R              +KR  + S++R +F + 
Sbjct: 138 LKPLPTPRTDADGKVHDAFTNPELRYRQRYVDLVVNPQVREVFVKRTKLFSAMRNFFNDA 197

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ  PG     R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 198 GYMEVETPILQAIPGGAA-ARPFITH---HNALDIPLYMRIANELYLKRLIVGGFDGVYE 253

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVN 158
           F+  +RN      H PEFT +E Y +++ Y  +M     ++   A   N     +F   N
Sbjct: 254 FSKNFRNEGMDRTHNPEFTAMEIYVSYKDYNWMMDFTERLLEHCAIAVNGTSECTFNEHN 313

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +  + +T+ ++   +   D+              L   A+  GI V        + 
Sbjct: 314 ISFKAPYKRVTMRQSIIDFTGFDIAG-------KSEDELRAAAKGMGIPVDDTMGKGKLI 366

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 367 DEIFGEKCEGNY--IQPTFITDYPKEMSPLCKTHRDNPELTERFELMVCGKEIANAYSEL 424

Query: 279 LDPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPI+QR RFE +++  +K  +E    ID+DFL  L   MP +SG+ +G DRL+M +T  
Sbjct: 425 NDPIDQRERFEDQVRLAEKGDDEATGMIDQDFLRALEYGMPPTSGLGIGMDRLIMYLTNN 484

Query: 337 NNINEVIWTPFSQSNQ 352
            +I EV++ P  +  +
Sbjct: 485 PSIQEVLFFPQMRPEK 500


>gi|313205503|ref|YP_004044160.1| lysyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312444819|gb|ADQ81175.1| lysyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 575

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 104/374 (27%), Positives = 166/374 (44%), Gaps = 35/374 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR  +  S+R+YF    
Sbjct: 141 LRPLPIVKYKDGVAFDAFEDPEQRYRQRYVDLVVNDGVKDIFLKRTKVYQSMRDYFNAQG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           +IE+++  LQ  PG  +  R F T     + +  PLYL+ + E   K+L+  G E ++ F
Sbjct: 201 YIEVETPILQSIPGGAS-ARPFITH---HNALDIPLYLRVADELYLKRLIVGGFEGVYEF 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNC 159
           +  +RN      H PEFT +E Y A++ Y  +M     +I       N     +  +   
Sbjct: 257 SKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTERMIEKICLDVNGTNEITVGDKTI 316

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +  + IT+ +A   +  ID+          D   L    +   + V        +  
Sbjct: 317 SFKTPFKRITMIDAIKEHTGIDINGM-------DEVQLREVCKTLHVEVDETMGKGKMID 369

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  EK E N      T +  YP   S L   +  +P  T+RFEL     EL NA  EL 
Sbjct: 370 EIFGEKCEGNY--IQPTFITDYPREMSPLCKRHRDNPELTERFELMVNGKELANAYSELN 427

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++++  +K  +E   ID DF+  L   MP +SG+ +G DRLVML+TG   
Sbjct: 428 DPIDQLGRFQEQLKLSEKGDDEAMFIDMDFVRSLEYGMPPTSGMGIGMDRLVMLMTGQQA 487

Query: 339 INEVIWTPFSQSNQ 352
           I EV++ P  +  +
Sbjct: 488 IQEVLFFPQMKPEK 501


>gi|37527421|ref|NP_930765.1| lysyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|39932032|sp|Q7N1C8|SYK_PHOLL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|36786856|emb|CAE15921.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 504

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 162/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ +  +LR + V   F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQETRYRQRYLDLIANEESRKTFQIRSQVLLALRSFMVSKGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MMQVIPGGAA-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R     +    +  +     +      
Sbjct: 265 GVSPRHNPEFTMMELYMAYADYKDLIVLIEELFRTLTQNILGNTLVKYGEQEFDFGKPFA 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D   +   A+  GI V        +   I  E  
Sbjct: 325 QMTMKEAICKY-----RPETNIADLDDMDKVVAIAESLGIEVEKGWGLGRVQCEIFEETA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA    A+P  T RFE +    E+ N   EL D  +Q  
Sbjct: 380 ESH--LIQPTFITEYPAEVSPLARRNDANPFITDRFEFFIGGREIGNGFSELNDAEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++K +  +E    DED++  L   MP ++G+ +G DR++ML+T ++ I +VI  
Sbjct: 438 RFAEQVRQKDEGDDEAMFYDEDYVTALEHGMPPTAGLGIGIDRMIMLLTDSHTIRDVILF 497

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 498 PAMRPQK 504


>gi|240949401|ref|ZP_04753742.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296150|gb|EER46806.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 501

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 99/364 (27%), Positives = 163/364 (44%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     +++  YR+R              + R+ + S +R++F+E  FIE+++ 
Sbjct: 146 LRPLPNKVQGITDQEIRYRQRYLDLISNEESRRTFMIRSQVVSGIRQFFLERGFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++       +     +     E
Sbjct: 262 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTTDVPYGEYVFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ EA  +Y N      +   D  D       A+   I +        I + I  E  
Sbjct: 322 RITMHEAIVKYGN-----GISMEDLHDFDKAVAIAKGLHIEIQKSWGLGSIVNAIFEEVA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 377 EHQ--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DEDF+  L   +P ++G  +G DRL M+   A +I +VI  
Sbjct: 435 RFDAQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PAMR 498


>gi|160946714|ref|ZP_02093917.1| hypothetical protein PEPMIC_00672 [Parvimonas micra ATCC 33270]
 gi|158447098|gb|EDP24093.1| hypothetical protein PEPMIC_00672 [Parvimonas micra ATCC 33270]
          Length = 493

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 171/369 (46%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I SS+R+Y     F+E+++ 
Sbjct: 134 LQLLPEKFHGLKDVDLRYRQRYVDLIVNPEIKDVFVMRSKIISSIRKYLDSRGFLEVETP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + R F T     + +   +YL+ + E   K+L+  G +K++     +RN 
Sbjct: 194 ILNTIPGGA-NARPFITH---HNTLDIDMYLRIANELYLKRLIVGGFDKVYEMGRMFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
               LH PE+T +E Y+A+  YE++MK C  ++     EV  +     Q    +      
Sbjct: 250 GMDKLHNPEYTAIELYQAYVDYEEMMKLCEEMVYTVCMEVVGKSEVELQGKVIDFKPPWR 309

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ +A   YA +D  T L + +          A +  I +    T  +I S    E  
Sbjct: 310 RISMVDAVKEYAGVDFETILTDEE------ARKIAIEKKIEITEHTTRGEIISLFFEEFC 363

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E  +     T + ++P   S LA   P D R+T+RFE +    E+ NA  EL D I+Q+ 
Sbjct: 364 EEYMV--QPTFVTKHPVEISPLAKRDPKDKRYTQRFEAFVNCGEIANAFSELNDAIDQKQ 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++ ++   +E   +D DF+  L   +P + G+ +G DRL+M +T  + I +V+  
Sbjct: 422 RFLKQVEARENGDDEAQMMDYDFINALEIGLPPTGGMGIGIDRLIMYLTNQDTIRDVLLF 481

Query: 346 PFSQSNQEE 354
           P  +   E+
Sbjct: 482 PTMKPMVEK 490


>gi|88803560|ref|ZP_01119085.1| lysyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88780572|gb|EAR11752.1| lysyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 564

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 99/377 (26%), Positives = 168/377 (44%), Gaps = 36/377 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  + +++R +F +  
Sbjct: 136 LKPLPMPKIKDGVTFDAFTDPEMRYRQRYADLVVNPHVKEVFIKRTKLFNAMRSFFNDAG 195

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ  PG     R F T     + +  PLY++ + E   K+L+  G + ++ F
Sbjct: 196 YFEVETPVLQPIPGGAA-ARPFITH---HNSLDIPLYMRIANELYLKRLIVGGFDGVYEF 251

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNC 159
           +  +RN      H PEFT +E Y +++ Y  +M     ++   A   N     +F     
Sbjct: 252 SKNFRNEGMDRTHNPEFTAMEIYVSYKDYNWMMDFAEQLLEHCAIAVNGTSEATFGEHKI 311

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    IT+A++   +   D+              +   AQ   I V        +  
Sbjct: 312 DFKAPYARITMADSIKHFTGFDITG-------KTEDEIRAAAQSMHIEVNATMGKGKLID 364

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL 
Sbjct: 365 EIFGEKCEGNY--IQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELN 422

Query: 280 DPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
           DPI+QR RFE++++  +K  +E    IDEDFL  L   MP +SG+ +G DRL+M +T   
Sbjct: 423 DPIDQRERFEQQLKLAQKGDDEATEFIDEDFLRALEYGMPPTSGMGIGMDRLIMFLTNNQ 482

Query: 338 NINEVIWTPFSQSNQEE 354
           +I EV++ P  +  ++ 
Sbjct: 483 SIQEVLFFPQMRPEKKA 499


>gi|586059|sp|P37879|SYK_CRIGR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|469122|emb|CAA83505.1| Lysyl tRNA Synthetase [Cricetulus longicaudatus]
          Length = 597

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 159/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R  I + +R +  E  F+EI++ 
Sbjct: 210 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIVRAKIITYIRSFLDELGFLEIETP 269

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 270 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 325

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 326 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGEAYEI 385

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 386 DFTPPFRRISMVEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLD 445

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 446 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 503

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 504 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNN 563

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 564 IKEVLLFPAMKPEDKK 579


>gi|329767267|ref|ZP_08258794.1| lysyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836934|gb|EGF86581.1| lysyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 499

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR              + R+ I   +R Y  E  ++E+++ 
Sbjct: 146 LRPLPDKFHGLKDVEERYRRRYVDLIMNEDSKETFILRSKIIQIMRSYLNERGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   L+++ + E   K+L+  G EK++    A+RN 
Sbjct: 206 MMHSVAGGAA-ARPFVTH---HNALDMQLFMRIALELPLKRLIVGGLEKVYEIGRAFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    ++I      +       +     +   +  
Sbjct: 262 GVSTRHNPEFTMIELYEAYADYNDIMDLTESMIAYICNEIHGTTKIMYGEDEIDLTPKWR 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    + + +       +  A++  + V  D     I +      +
Sbjct: 322 RVHMVDAIKEVTGVDFWPEMTDAE------AHALAKEHNVPVRKDMKVGHIINEFFETFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 376 EET--LVQPTFVYGHPVEVSPLAKTNAEDTRFTDRFELFIVRREHANAFSELNDPIDQKE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +M EK     E Y +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 434 RFLAQMDEKDAGNEEVYEMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNSASIRDVLLF 493

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 494 PYMKHK 499


>gi|227528916|ref|ZP_03958965.1| lysine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227351190|gb|EEJ41481.1| lysine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 507

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 166/369 (44%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     + +  YR+R               +R  I  ++R Y  E+ F E+++ 
Sbjct: 139 LRPLPNKWEGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRRYMDEHGFTEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   +YL+ + E   K+L+  G E+++     +RN 
Sbjct: 199 ILNTQAGGA-NARPFITH---HNALDIDMYLRIATELYLKRLIVGGFERVYELGRIFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  +  +M +   I++ AA+V +     ++Q    +   + +
Sbjct: 255 GMDPHHNPEFTTMETYAAYFDFRDVMDETEGIVKAAAKVVSDDGKVTYQGHEIDLGGDFK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A      ID        D          A +  +      T   I +    E +
Sbjct: 315 RITMVDAVKEKTGIDFSDESMTDDDA-----KKLADEHKVEYKPYWTKGHILNAFFEEFV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFELY    EL NA  EL DPI+Q+ 
Sbjct: 370 EDT--LIQPTFVYEYPVEVSPLAKRNKENPAMTDRFELYVDGSELANAFSELNDPIDQKE 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +EK    +E  P+D D++  L   MP + G+ +G DRLVML+T A +I +VI  
Sbjct: 428 RFEMQAKEKANGNDEAEPVDLDYVEALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILF 487

Query: 346 PFSQSNQEE 354
           P  +  +EE
Sbjct: 488 PTMRPEKEE 496


>gi|78356412|ref|YP_387861.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218817|gb|ABB38166.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 532

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 165/365 (45%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR  I    R +  E  F+E+++ 
Sbjct: 177 IRPLPEKYHGLKDVETRYRQRYVDLIVTPRTREIFRKRGQIVREFRNFMEERGFMEVETP 236

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   LY++ +PE   K+LL  G EK+F     +RN 
Sbjct: 237 MMQPIPGGAT-AKPFVTH---HNALDMQLYMRIAPELYLKRLLVGGFEKVFEINRNFRNE 292

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFS-EP 165
                H PEFTM E+Y A+  +E LM     +  R A +V    + ++Q    +    + 
Sbjct: 293 GISTQHNPEFTMCEFYWAYARFEDLMDLTEQLFSRLAQKVCGSTVITYQGQEVDLTPGKW 352

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + +T  ++  +                D   L    ++ G +V   +    + +++    
Sbjct: 353 QRMTFHDSLEKVGG------HAPEFYNDYEKLSAYIRERGEKVIEGEKLGKLQAKLFDLD 406

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +     +  YP   S L+     +P  T RFEL+    EL NA  EL DP++QR
Sbjct: 407 VE--YKLIQPHFIYHYPTDISPLSRRNDDNPDVTDRFELFITGRELANAFSELNDPVDQR 464

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK+   +E + +DED+L  L   MP ++G  +G DRLVML+T + +I EVI 
Sbjct: 465 KRFDDQVAEKEAGDDEAHFMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSASIREVIL 524

Query: 345 TPFSQ 349
            P  +
Sbjct: 525 FPLLK 529


>gi|229844834|ref|ZP_04464972.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229812215|gb|EEP47906.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 502

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 100/364 (27%), Positives = 169/364 (46%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++ +  I  +     +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILSTTIVKYGEYEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D +     A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFNRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    D+DF+  L   +P ++G  +G DRL ML   A++I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPTAGEGLGIDRLAMLYANASSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|146312949|ref|YP_001178023.1| lysyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980067|sp|A4WE42|SYK_ENT38 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145319825|gb|ABP61972.1| lysyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 505

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRKTFKIRSQIMAGIRQFMVGRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +       + +   +      
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQNILGTTEVPYGDEVFDFGKPFV 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  +       A+  GI+V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETEMADLDNYDSAKAIAESIGIKVEKSWGQGRIVTEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAQDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPVK 505


>gi|225561216|gb|EEH09497.1| lysyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 609

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 91/372 (24%), Positives = 157/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  RD    YR+R              + R+ + S +R +F E  F+E+++ 
Sbjct: 217 LHQIPSEHYGLRDQEQRYRQRYLDLIMNDRSRNVFVTRSKMISYIRRFFDERDFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++L+ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNTIAGGAT-AKPFITH---HNDLNMDMFLRVAPELYLKMLIVGGLERVYELGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     ++    +       +  +         N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDIMNVTEELVSGLVKHITGGYETTFHTQTGEEFKVNW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                       L    ++  I     +T + +  ++
Sbjct: 393 KAPWKRIEMIPALEEATGEKFPPGDQLHTMETNEFLKKILKKVNIECTPPETNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +  +    +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEETC--INPTFITGHPQMMSPLAKYHRDNVGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQASQKAQGDDEAQLIDENFCTSLEFGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF +  +
Sbjct: 571 EVLAFPFMKEEK 582


>gi|300718199|ref|YP_003743002.1| Lysyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299064035|emb|CAX61155.1| Lysyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 506

 Score =  335 bits (858), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 165/365 (45%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R + V  +F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANEESRKTFKIRSQIMAGIRSFMVGREFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F+T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFTTH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ +    +  +     +     +
Sbjct: 266 GISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGNTVVPYGEQEFDFGKPFD 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       AQ  GI++        + + I  E  
Sbjct: 326 KLTMKEAILKY-----RPETNLADLDDFDKAAAIAQSLGIKIEKSWGLGRLVTEIFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAQDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 498

Query: 346 PFSQS 350
           P  + 
Sbjct: 499 PAMRP 503


>gi|325578590|ref|ZP_08148690.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159826|gb|EGC71956.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 502

 Score =  335 bits (858), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 100/364 (27%), Positives = 167/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     D    YR+R              + R+ + + +RE+F+   F+E+++ 
Sbjct: 146 LRPLPNKFHGLTDMEARYRQRYLDLISNEESRRTFIIRSKVVAGIREFFISKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAS-ARPFITH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  + ++  +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHDATIKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    D+DF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|505108|dbj|BAA06688.1| KIAA0070 [Homo sapiens]
          Length = 601

 Score =  335 bits (858), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 214 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 274 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +         + 
Sbjct: 330 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDV 389

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + E   +   + L  T     +  R +L        +      T + +  
Sbjct: 390 DFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 449

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 450 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 507

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 508 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 567

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 568 IKEVLLFPAMKPEDKK 583


>gi|325294994|ref|YP_004281508.1| Lysyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065442|gb|ADY73449.1| Lysyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 512

 Score =  335 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 158/370 (42%), Gaps = 28/370 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R  I   LRE+     F+E+++ 
Sbjct: 144 LRPLPEKWHGLTDVEKRYRQRYLDLIVNPQVREIFRTRTKIIKKLREFLDSKGFMEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         + F T     + +   +YL+ +PE   K+LL  G E+++     +RN 
Sbjct: 204 ILQPIASGAA-AKPFITHY---NALDIDVYLRIAPELYLKRLLVGGFERVYELGKNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK---IFSFQNVNCNPFSE 164
                H PEFTM+E+Y A+  Y  LM+    +     +    K      +Q    +    
Sbjct: 260 GISTRHNPEFTMVEFYMAYADYNDLMELTEELFEYLLDEIFGKGAREIEYQGTKLSFKRP 319

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
              I+  E  ++  ++      ++    D   +  +A++ G+  A   +       +   
Sbjct: 320 FRRISYLEELSKKTSL-----TEDELLHDEEKVLEKAKEVGVENAEKLSHFKRVQELFEA 374

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            IEP   +   T +  +P   S LA     +P   +RFEL+    E+ NA  EL +P EQ
Sbjct: 375 LIEPE--LIQPTFVIDFPKAISPLAKEKRGNPELVERFELFIFGREIANAYTELNNPEEQ 432

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF ++++EK K  +E    D DF+  L   MP ++G  +G DRLVML T  ++I EV+
Sbjct: 433 EARFRQQLEEKAKGDDEAMEYDADFITALEYGMPPTAGEGIGIDRLVMLFTDKDSIREVL 492

Query: 344 WTPFSQSNQE 353
             P  +  ++
Sbjct: 493 LFPQLRPEKK 502


>gi|299144546|ref|ZP_07037625.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517634|gb|EFI41374.1| lysine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 500

 Score =  335 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 97/371 (26%), Positives = 170/371 (45%), Gaps = 29/371 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR  I  S+R Y     F+E+++ 
Sbjct: 137 LQILPEKFHGLKDPDLRYRQRYVDLIVNPEIKDVFIKRTKILKSIRNYLDSRDFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   + ++ + E   K+L+  G ++++     +RN 
Sbjct: 197 ILATVAGGA-NARPFLTH---HNTLDMDMQMRIANELFLKRLIVGGMDRVYEMGKMFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  YE +M+    I   AA         ++Q    +  +  +
Sbjct: 253 GMDTRHNPEFTNIEVYQAYADYEDMMRLTEGIFENAAMEVYGTTKITYQGTEIDLKAPWK 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A      +D      + +          A+  G+ +  D T   I S +  E  
Sbjct: 313 RITMIDAINEATGVDFNKIDSDEE------AQKIAKAKGLEIESDWTRGKIISEMFEEFC 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T + ++P   S LA     DPR T RFE +    E  NA  EL DPI+QR 
Sbjct: 367 EAS--LIQPTFVLKHPVEVSPLAKRSAEDPRLTDRFEAFINTWEFANAFSELNDPIDQRE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++++EK+   +E +P+D DF+  L   +P + G+ +G DR+VML+T   +I +V++ 
Sbjct: 425 RFEEQVREKEAGDDEAHPMDYDFVNALEVGLPPTGGLGIGVDRMVMLLTDQPSIRDVVFF 484

Query: 346 PFSQS--NQEE 354
           P  +    ++E
Sbjct: 485 PTMKPIVKKDE 495


>gi|33862174|ref|NP_893735.1| lysyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|39932077|sp|Q7UZP0|SYK_PROMP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33634392|emb|CAE20077.1| Lysyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 512

 Score =  335 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 162/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R    S +R +  E  F+EI++ 
Sbjct: 142 LQPLPDKWHGLTDIEKRYRQRYLDLIVNPLSKNVFKTRAKCISLIRRWLDEKNFLEIETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+++  G EK++     +RN 
Sbjct: 202 ILQSEAGGA-EARPFITH---HNTLDIPLYLRIATELHLKRMVVGGFEKVYELGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA-AEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A  +Y  +M    ++IR       +  I ++Q    +     +
Sbjct: 258 GISTKHNPEFTSVEIYQAFSNYIDMMNLTEDLIRDIVLSCCDSLIINYQEKVIDFSKPWK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            I++ +    Y  ID  +        D +      +++ I ++        + + +  EK
Sbjct: 318 RISMKDVVMEYTGIDFDSFNG-----DLNKAMKDLEESNIEISPKINTLGRLLNEVFEEK 372

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  +P +    +RFEL+    EL NA  EL+DP++QR
Sbjct: 373 VESQ--LVEPTFVIDYPIEISPLARPHPENKEMVQRFELFIAGRELANAFSELIDPVDQR 430

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R + +   +     E + IDEDFL  L   MP + G+ +G DRL+ML+T + +I +VI 
Sbjct: 431 KRMQLQQSLRDAGDLEAHCIDEDFLQALEIGMPPTGGLGIGIDRLIMLLTNSPSIRDVIT 490

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 491 FPLLKPE 497


>gi|325288418|ref|YP_004264599.1| Lysyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963819|gb|ADY54598.1| Lysyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 491

 Score =  335 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 169/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              + R+ I  ++REY  +  F+E+++ 
Sbjct: 136 LRNLPEKFHGLTNVETRYRQRYLDLIMNSDVKQTFIVRSQIIRAMREYLEDKGFLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L   PG  T  R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 196 TLMTIPGGAT-ARPFITH---HNALDMQLYMRIALELPLKRLIVGGFEKVYEIGRIFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  YE +M    ++I       +     S+Q    N     +
Sbjct: 252 GISVKHNPEFTMMELYQAYADYEDIMNLTEDMIIYITRKVHNTLELSYQGETINFAKPWK 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +    Y  ID      +            A   G+ +  D+T   I +    E +
Sbjct: 312 RVKMLDLIKEYTGIDFEEIQTD------EEARAVADSRGLIIGKDETKGKIINAFFEEYV 365

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P +T RFEL+    E  NA  EL DPI+QR 
Sbjct: 366 ESK--LIQPTFVIGHPVDISPLAKRNARNPEYTDRFELFIYGRETANAFSELNDPIDQRG 423

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFEK+M E++K   E + +DEDFL  L   +P + G+ +G DRLVML+T + +I +VI  
Sbjct: 424 RFEKQMVEREKGDEEAHMLDEDFLQSLEYGLPPTGGLGIGIDRLVMLLTDSASIRDVILF 483

Query: 346 PFSQSNQE 353
           P  +  +E
Sbjct: 484 PTMKPREE 491


>gi|167752417|ref|ZP_02424544.1| hypothetical protein ALIPUT_00661 [Alistipes putredinis DSM 17216]
 gi|167660658|gb|EDS04788.1| hypothetical protein ALIPUT_00661 [Alistipes putredinis DSM 17216]
          Length = 574

 Score =  335 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 92/377 (24%), Positives = 165/377 (43%), Gaps = 35/377 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR+ I S++REYF +  
Sbjct: 142 LRPLPVVKEKDGQTFDAFTDPEIRYRQRYVDLIVNPHVREVFIKRSKIISTMREYFNQFG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           ++E+++  LQ  PG     R F T     + +    YL+ + E   KKL+  G + ++ F
Sbjct: 202 YVEVETPILQPIPGGAA-ARPFITH---HNALDIDQYLRIASELYLKKLIVGGFDGVYEF 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNC 159
              +RN      H PEFT++E Y A++ Y  +M+    ++   A                
Sbjct: 258 GKNFRNEGMDRTHNPEFTVMEIYVAYKDYLWMMEFTERMLEKVALALHGTTTVQIDGREI 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    +T+ +A       D+              L    ++  + +        +  
Sbjct: 318 SFKAPFRRLTMTDAIREKTGYDITGQS-------EEQLREACKRLEVEIDDTMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  +  E    +   T +  YP   S L   + ++P  T+RFEL+    ELCNA  EL 
Sbjct: 371 AIFGQYCEEE--LIQPTFIMDYPCEMSPLCKRHRSNPDLTERFELFVNGKELCNAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++++  +K  +E   ID DF+  L   MP  SG+ +G DRL M +TG ++
Sbjct: 429 DPIDQLERFQEQLRLSEKGDDEAMFIDMDFVRALEYGMPTCSGMGIGIDRLTMFMTGNSS 488

Query: 339 INEVIWTPFSQSNQEEI 355
           I +V++ P  +  ++ +
Sbjct: 489 IQDVLFFPQMRPEKKAV 505


>gi|308272633|emb|CBX29237.1| Lysyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 498

 Score =  335 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 97/369 (26%), Positives = 170/369 (46%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR+ I   +R YF+E  +IE ++ 
Sbjct: 140 IRPLPEKFHGLKDTEKRYRQRYLDLIMNQNVRDIFVKRSQIIRKIRNYFLERDYIEAETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG       F T     + +   L+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 200 MMQQIPGGA-EATPFKTH---HNALGIDLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+ +Y+ LM    N+  + + E+       +Q  + +   + +
Sbjct: 256 GVSTHHNPEFTMLEFYEAYATYQDLMDLTENLFSKLSLEITGSTSIVYQGNSIDFSGKWK 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++  A   +  +D           D+  L   A   GI++   D    I +++    +
Sbjct: 316 RISLLNALEEFGGVDPS------LIKDKEKLLNFAYSKGIKITKADRIGKIITKLFDALV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +    +   T +  YP   S L+     DP  T RFEL+    E+ N   EL DP +Q++
Sbjct: 370 QDK--LIQPTFITEYPVEVSPLSRRNDKDPSMTDRFELFIAGCEIANGFSELNDPEDQKN 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  ++    E + +DED++  L   MP ++G  +G DRL ML T + +I EVI  
Sbjct: 428 RFIQQLSIRQDGDEEAHFMDEDYIEALEYGMPPTAGEGIGIDRLTMLFTDSASIREVILF 487

Query: 346 PFSQSNQEE 354
           P  +   ++
Sbjct: 488 PHMKPAGQK 496


>gi|257899976|ref|ZP_05679629.1| lysyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293571081|ref|ZP_06682122.1| lysyl-tRNA synthetase [Enterococcus faecium E980]
 gi|257837888|gb|EEV62962.1| lysyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|291608864|gb|EFF38145.1| lysyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 498

 Score =  335 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 103/364 (28%), Positives = 163/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N +IE+++ 
Sbjct: 147 LRPLPDKYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYLDGNGYIEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDIDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M     IIR AA+        ++     +  S+ +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAQKVLGTAKITYDGQAVDLESDFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +              A++  + V        + +      +
Sbjct: 323 RIHMVDAIKEQTGVDFWKEMT------LEEALALAEKHNVEVTEAMGVGHVINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EET--LTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFTELNDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +E++   +E + +DEDFL  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEAQEKERELGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PTMR 498


>gi|281342432|gb|EFB18016.1| hypothetical protein PANDA_017574 [Ailuropoda melanoleuca]
          Length = 625

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 238 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRTFLDELGFLEIETP 297

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 298 MMNVIPGGAV-AKPFIT---YHNELDMNLYMRVAPELYHKILVVGGIDRVYEIGRQFRNE 353

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +           
Sbjct: 354 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVQHITGSYKVTYHPDGPEGEAFEI 413

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 414 DFTPPFRRISMVEELEKVLGVKLPETKLFETEETRKILDDLCVARAVECPPPRTTARLLD 473

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 474 KLVGEFLETTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFIMKKEICNAYTELN 531

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE++   L   +P ++G  MG DR+ M +T +NN
Sbjct: 532 DPVRQRELFEEQAKAKAAGDDEAMFIDENYCTALEYGLPPTAGWGMGIDRITMFLTDSNN 591

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 592 IKEVLLFPAMKPEDKK 607


>gi|254480185|ref|ZP_05093433.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214039747|gb|EEB80406.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 497

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R+Y +E  F+E+++ 
Sbjct: 143 LRPLPDKYHGLSDQEMRYRQRYVDLIVNEESRKVFRTRSRIIAFIRDYMMERGFMEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     + F T     + + + +YL+ +PE   K+L   G E++F    ++RN 
Sbjct: 203 MMQVIPGGAA-AKPFVTH---HNALDQDMYLRIAPELYLKRLTVGGFERVFEINRSFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+ ++E  M    +++R    EV       +Q  + +      
Sbjct: 259 GLSTRHNPEFTMLEYYWAYGAFEDAMDLTEDMLRKLTQEVIGSTTVEYQGGSYDFSQPFV 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V +A  +Y        +   D  D       A+  GI +        +   I  + +
Sbjct: 319 RLSVFDAILQY-----NADISAEDLADEGKARDIAKGLGIALKESWGLGKVQIEIFEKTV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    ++  T + RYP   S L+     DP  T RFE +    EL N   EL DP +Q  
Sbjct: 374 E--HLLDQPTFITRYPTEVSPLSRRNDDDPFVTDRFEFFIGGRELANGFSELNDPEDQAE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK    +E    D D++  L   +P + G  +G DRLVM +T + +I +V+  
Sbjct: 432 RFLAQVAEKDAGDDEAMHYDADYIRALEYGLPPTVGEGIGIDRLVMFLTDSASIRDVLLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PHMRPE 497


>gi|78189143|ref|YP_379481.1| lysyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|123729854|sp|Q3ARD7|SYK_CHLCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78171342|gb|ABB28438.1| Lysyl-tRNA synthetase, class-2 [Chlorobium chlorochromatii CaD3]
          Length = 511

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 101/377 (26%), Positives = 168/377 (44%), Gaps = 39/377 (10%)

Query: 1   MHQIPSQP-------------WWNRDFHYRRR-----------PFLLKRNMIQSSLREYF 36
           +  IP                + +++  YR+R              +KR  I +++R +F
Sbjct: 148 LRPIPIAKEKEVDGEKVVFDAFSDKELRYRQRYVDLIVNPEVRETFIKRTAIVAAMRNFF 207

Query: 37  VENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
             + ++E+++  LQ   G     R F+T     + +   LYL+ + E   K+L+  G + 
Sbjct: 208 ARHGWLEVETPILQPIYGGAA-ARPFTTH---HNALDMQLYLRIANELYLKRLIVGGFDG 263

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQ 155
           +F FA  +RN      H PEFT +E Y A++ Y  +M     +I   A   N+    +F 
Sbjct: 264 VFEFAKDFRNEGIDRFHNPEFTQVELYVAYKDYNWMMNLVEELIYTTAMEVNKSDTTTFL 323

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
               +       +T+++A A Y + D+              L   A++ G+ +       
Sbjct: 324 GHEISVKPPFRRLTISDAIAEYTDKDIRN-------KSEEELRNIAKELGLELDPKIGNG 376

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            I   I  E +EP   +   T +  YP   S LA  + A P   +RFEL     E+CN+ 
Sbjct: 377 KIIDEIFGEFVEPK--LIQPTFITDYPTEMSPLAKEHAAQPGIVERFELIVGGKEVCNSF 434

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP+ QR R E + + + +   E   +DEDFL  +   MP  +G+ +G DRLVML+T
Sbjct: 435 SELNDPVIQRERLESQAKLRLRGDEEAMVVDEDFLRAIEYGMPPCAGLGVGIDRLVMLLT 494

Query: 335 GANNINEVIWTPFSQSN 351
           G  +I +VI+ P  +  
Sbjct: 495 GQESIRDVIFFPHLKPE 511


>gi|153813032|ref|ZP_01965700.1| hypothetical protein RUMOBE_03440 [Ruminococcus obeum ATCC 29174]
 gi|149830834|gb|EDM85924.1| hypothetical protein RUMOBE_03440 [Ruminococcus obeum ATCC 29174]
          Length = 586

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 160/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R +     F+E+++ 
Sbjct: 89  LQILPEKFHGLTDTDTRYRQRYVDLIMNQDSKNVFIKRSQILKEIRNFLAGRDFMEVETP 148

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 149 MLVSNAGGAA-ARPFETHY---NALNEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 204

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+   ++ R  A +V      S+  V  +      
Sbjct: 205 GVDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGSTKISYNGVEIDLGKPFA 264

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +YA ID        +  D       A +  I         DI +    E  
Sbjct: 265 RMTMNEAIKKYAGIDFD------EVADDEAAKKLADEHHIEYEAHHKKGDIINLFFEEYC 318

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P+DP   +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 319 EKE--LIQPTFIMDHPIEISPLTKKKPSDPSKVERFELFCNTWEMCNAYSELNDPIDQRE 376

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +         E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 377 RFKAQDALADAGDEEANHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLF 436

Query: 346 PFSQSN 351
           P  +S 
Sbjct: 437 PTMKSQ 442


>gi|326474941|gb|EGD98950.1| lysyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326483843|gb|EGE07853.1| lysyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 609

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 92/375 (24%), Positives = 161/375 (42%), Gaps = 26/375 (6%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  +D   R              R   + R+ I S +R YF E  F+E+++ 
Sbjct: 217 LHQIPSEHYGLKDQEQRFRQRYLDLIMNDSSRNVFVTRSKIVSYIRRYFDERDFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNAIAGGAT-AKPFITH---HNELNMNLFMRIAPELYLKMLIVGGLERVYEMGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     LM    +++    +       +  +       N N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDLMNVTEDLVSGLVKHVTGGYETVFHTQSGEQYNVNW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                 +     L    ++  +      T + +  ++
Sbjct: 393 KAPWKKIEMIPALEEATGEKFPPGDQLHTEETNEFLKRILKKVNVECTPPLTNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        + +  +P   S LA  +   P   +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEEKC--INPSFIIGHPQMMSPLAKYHRDHPGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K++  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQARQKEQGDDEAQMIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQEEI 355
           EV+  PF + ++  +
Sbjct: 571 EVLAFPFMKEDKTAV 585


>gi|148981823|ref|ZP_01816540.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145960731|gb|EDK26071.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 505

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + SS+R +     ++E+++ 
Sbjct: 144 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNAFIVRSKLVSSIRNFMSSKGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 204 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFDRVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++  AA  V       + +       +  
Sbjct: 260 GLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTAAMDVLGSTSMPYGDETVEFGGKYA 319

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y         L   D  DR  +   A+   + V    T   +   I  E 
Sbjct: 320 RMSMFEAIKHYNPEHAEIQALTEEDLQDREKMVAIAKSVHVEVETFWTCGQLLEEIFGET 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 380 AEPQ--LIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRL ML T  + I +VI 
Sbjct: 438 ERFKAQVNAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVIL 497

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 498 FPAMRPQ 504


>gi|115398990|ref|XP_001215084.1| lysyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114191967|gb|EAU33667.1| lysyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 609

 Score =  335 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 87/372 (23%), Positives = 157/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H IPS+ +   +++  YR+R              + R+ I   +R +F    F+E+++ 
Sbjct: 213 LHAIPSEHFGLQDKEQRYRQRYLDLIMNDRSRNVFITRSKIVRYIRNFFDNRDFVEVETP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 273 MMNAIAGGAT-AKPFVTH---HNELDMNLFMRVAPELYLKMLIVGGLERVYELGRQFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     ++    +       +  +         N 
Sbjct: 329 GIDLTHNPEFTTCEFYWAYADVYDVMNLTEELVSGLVKHVTGGYETTFHTQTGEEYQVNW 388

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    + +  A                       L    ++ G+  +   T + +  ++
Sbjct: 389 KAPWRRVEMIPALEEATGEKFPPGDQLHTAETGEFLKRVLKKTGVECSPPMTNARMLDKL 448

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +  D    +RFE + C  E+ NA  EL DP
Sbjct: 449 VGEFIEETCV--NPTFITGHPQMMSPLAKYHRKDVGLCERFEAFVCKKEIVNAYTELNDP 506

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 507 FDQRLRFEEQARQKDQGDDEAQLIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 566

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 567 EVLAFPFMKEDK 578


>gi|260775419|ref|ZP_05884316.1| lysyl-tRNA synthetase (class II) [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608600|gb|EEX34765.1| lysyl-tRNA synthetase (class II) [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 505

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 90/367 (24%), Positives = 157/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R +     ++E+++ 
Sbjct: 144 LRPLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFIIRSKLVSAIRNFMSSKGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 204 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFDRVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++   A  V       + +       +  
Sbjct: 260 GLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTVAMDVLGSTSMPYGDETVEFGGKYA 319

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y         L   D  +R  +   A+   + V    T   +   I  E 
Sbjct: 320 RMSMFEAIKHYNPEHAEIQALTEQDLTNRDKMVAIAKSVHVEVETFWTCGQLLEEIFGET 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 380 AEPQ--LIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRL ML T  + I +VI 
Sbjct: 438 ARFKAQVDAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVIL 497

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 498 FPAMRPQ 504


>gi|150006819|ref|YP_001301562.1| lysyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|166229813|sp|A6L8C6|SYK_PARD8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|149935243|gb|ABR41940.1| lysyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 576

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 91/374 (24%), Positives = 152/374 (40%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  I  ++R    E  
Sbjct: 142 LRPLPVVKYKDGVAYDGFNDPELRYRQRYVDLVVNEGVKDIFMKRAAIIKTMRTALDEAG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ   G  +  R F T     + +   LYL+ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPILQSIAGGAS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNC 159
              +RN      H PEFT +E Y  ++ Y  +M     ++       N     +      
Sbjct: 258 GKNFRNEGMDRTHNPEFTCMELYVQYKDYNWMMSFTEKLLERICIAVNGTSESTIDGKTI 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    + + EA       D        +      +    ++  + +        +  
Sbjct: 318 SFKAPFRRLPILEAIKEKTGYD-------LEGKTEDEIRAICKELKMEIDDTMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 371 EIFGEFCEGT--FIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++++  +K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 429 DPIDQEERFKEQLRLSEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTT 488

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 489 IQEVLLFPQMRPEK 502


>gi|311278190|ref|YP_003940421.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308747385|gb|ADO47137.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 506

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 162/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 151 LRPLPDKFHGLQDQEARYRQRYLDLIANDESRNTFKIRSQILAGMRKFMVGRGFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 211 MMQVIPGGAS-ARPFITH---HNALDMDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V  +    +     +      
Sbjct: 267 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGKTEVPYGEHTFDFGKPFV 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  +       A+  GI V        I + I  E  
Sbjct: 327 KLTMREAIKKY-----RPETNMADLDNFDAAKAIAESIGIHVEKSWGLGRIVTEIFDEVA 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 382 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 440 RFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 499

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 500 PALRPVK 506


>gi|302658888|ref|XP_003021142.1| hypothetical protein TRV_04757 [Trichophyton verrucosum HKI 0517]
 gi|291185024|gb|EFE40524.1| hypothetical protein TRV_04757 [Trichophyton verrucosum HKI 0517]
          Length = 620

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 92/375 (24%), Positives = 161/375 (42%), Gaps = 26/375 (6%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  +D   R              R   + R+ I S +R YF E  F+E+++ 
Sbjct: 217 LHQIPSEHYGLKDQEQRFRQRYLDLIMNDSSRNVFVTRSKIVSYIRRYFDERDFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNAIAGGAT-AKPFITH---HNELNMNLFMRIAPELYLKMLIVGGLERVYEMGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     LM    +++    +       +  +       N N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDLMNVTEDLVSGLVKHVTGGYETVFHTQSGEQYNVNW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                 +     L    ++  +      T + +  ++
Sbjct: 393 KAPWKKIEMIPALEEATGEKFPPGDQLHTEETNEFLKGVLKKVNVECTPPLTNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        + +  +P   S LA  +   P   +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEEKC--INPSFIIGHPQMMSPLAKYHRDHPGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K++  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQARQKEQGDDEAQMIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQEEI 355
           EV+  PF + ++  +
Sbjct: 571 EVLAFPFMKEDKTAV 585


>gi|254881511|ref|ZP_05254221.1| lysyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294775452|ref|ZP_06740965.1| lysine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319642896|ref|ZP_07997532.1| lysyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254834304|gb|EET14613.1| lysyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294450693|gb|EFG19180.1| lysine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317385444|gb|EFV66387.1| lysyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 576

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 97/359 (27%), Positives = 164/359 (45%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              +KR+ + SS+REYF    ++E+++  LQ   G 
Sbjct: 157 DKFEDPELRYRQRYVDLAVNEEIKDIFIKRSKVYSSMREYFNSKGYMEVETPILQSIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
               R F T     + +  PLY++ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AA-ARPFITH---HNALDMPLYMRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y A++ Y  +M+    +I     +V         +   +  +  + +T+ ++ 
Sbjct: 273 EFTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTQVKVGDNIIDFKAPYKRVTMLDSI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             +   DL          +   +    Q+  + +        +   I  E  E       
Sbjct: 333 KEHTGYDLTGM-------NEEQIREVCQKLNMEIDDTMGKGKLIDEIFGEFCEGTY--IQ 383

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L  I+ ++P  T+RFEL     ELCNA  EL DPI+Q  RFE++M+ 
Sbjct: 384 PTFITDYPKEMSPLTKIHRSNPDLTERFELMVNGKELCNAYSELNDPIDQLERFEEQMRL 443

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DF+  L   MP +SG+ +G DRL ML+TG + I EV++ P  +  +
Sbjct: 444 SEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQMRPEK 502


>gi|329118329|ref|ZP_08247038.1| lysine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465553|gb|EGF11829.1| lysine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 580

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  ++R Y V  +++E+++ 
Sbjct: 226 LRPLPDKHKGLADQEVKYRQRYVDLIVSPESRDTFIKRSKIIQTVRNYMVGERYLEVETP 285

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 286 MMHPIPGGAS-AKPFVTH---HNALDMPLYLRIAPELYLKRLIVGGLERVFEINRSFRNE 341

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A  +YE++M+    +IR  A+        S+     +  S  E
Sbjct: 342 GMSTRHNPEFTMMEFYEAFCTYERMMQMTEGVIRACAQAVCGTAKISYNGKEVDLESPFE 401

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y          +    D   L  +  + G  +        +   +     
Sbjct: 402 RLTILEAIKKY-----NPHYTDEQLSDEAWLKKEIVRLGESLPPAPGIGSLQLALFEGCA 456

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA      P  T RFEL+    EL N   EL DP +Q  
Sbjct: 457 EGK--LWNPTFIIDYPVEVSPLARASDTKPGLTDRFELFVVGRELANGYSELNDPEDQSA 514

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T A +I +VI  
Sbjct: 515 RFKAQVAQKDAGDDEAMHYDADYIRAMEYGLPPTGGSGIGLDRLVMLLTDAPSIRDVILF 574

Query: 346 PFSQSN 351
           P  +  
Sbjct: 575 PQMRPE 580


>gi|317968463|ref|ZP_07969853.1| lysyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 499

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 155/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R +  SS+R +  E  F+EI++ 
Sbjct: 134 LQPLPDKWHGLADVEKRYRQRYLDLIVSPDTRETFRRRAIAVSSIRRWLDERGFLEIETP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +  PL L+ + E   K+L+  G E+++     +RN 
Sbjct: 194 VLQSVPGGA-DARPFETH---HNALDLPLTLRIATELHLKRLVVGGFERVYELGRIFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +I     +V      S+Q    +      
Sbjct: 250 GISTRHNPEFTSIEVYQAYADYNDMMDLTEQLIAHVCQQVCGTTRISYQGTEIDLTPPWR 309

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ E       +D  + +   +          A          D+   +      +K+
Sbjct: 310 RATMHELVLDATGLDFSSFVSRAEAAAAMQAQGLAV-----PELADSVGRLLVEAFDQKV 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL+DP++QR 
Sbjct: 365 EST--LIQPTFVIDYPVENSPLARAHRSKPGLVERFELFIVGRETANAFSELIDPVDQRQ 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R E +M  K    +E   +DEDF+  L   MP + G+ +G DRLVML+T + +I +VI  
Sbjct: 423 RLEAQMARKAAGDDEAQEVDEDFINALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAF 482

Query: 346 PFSQSN 351
           P  +  
Sbjct: 483 PLLRPE 488


>gi|307276457|ref|ZP_07557580.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306506937|gb|EFM76084.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2134]
          Length = 498

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 167/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N ++E+++ 
Sbjct: 147 LRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDMDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ +M     IIR AA +V      ++     +  S  +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAVDLGSPFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +   +          A++  + +    T   I +      +
Sbjct: 323 RLHMVDAVKEQTGVDFWQEMTIEE------ACALAKEHNVEITDAMTVGHIINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EDT--LQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ +E+++  +E + +DEDF+  L   +P + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PTMR 498


>gi|332519717|ref|ZP_08396181.1| lysyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332044276|gb|EGI80470.1| lysyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 544

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 172/379 (45%), Gaps = 37/379 (9%)

Query: 1   MHQIP--------SQP--WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P        +Q   + + +  YR+R              +KR  + +++R +F + 
Sbjct: 117 LKPLPLPKVDADGNQHDAFVDPEMRYRQRYADLAVNPHVKEVFVKRTKLFNAMRSFFNDA 176

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            + E+++  LQ  PG     R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 177 GYFEVETPILQPIPGGAA-ARPFITH---HNSLDIPLYMRIANELYLKRLIVGGFDGVYE 232

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M  C  ++   A   N     +F    
Sbjct: 233 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFCEKLLEHCAIAVNGTSEATFGEHK 292

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N  +  + IT+A++   +   D+              +   A+  GI V        + 
Sbjct: 293 VNFKAPYKRITMADSIKEFTGFDITG-------KTEDEIRTAAKDMGIAVDATMGKGKLI 345

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 346 DEIFGEKCEGNY--IQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSEL 403

Query: 279 LDPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPI+QR RFE +++  +K  +E    ID DFL  L   MP +SG+ +G DRL+M +T  
Sbjct: 404 NDPIDQRERFEHQLKLAQKGDDEATEFIDHDFLRALEYGMPPTSGMGIGMDRLIMFLTNN 463

Query: 337 NNINEVIWTPFSQSNQEEI 355
            +I EV++ P  +  ++ I
Sbjct: 464 QSIQEVLFFPQMRPEKKAI 482


>gi|298377245|ref|ZP_06987198.1| lysine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298265659|gb|EFI07319.1| lysine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 576

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 91/374 (24%), Positives = 152/374 (40%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  I  ++R    E  
Sbjct: 142 LRPLPVVKYKDGVAYDGFNDPELRYRQRYVDLVVNEGVKDIFMKRAAIIKTMRTALDEAG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ   G  +  R F T     + +   LYL+ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPILQSIAGGAS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNC 159
              +RN      H PEFT +E Y  ++ Y  +M     ++       N     +      
Sbjct: 258 GKNFRNEGMDRTHNPEFTCMELYVQYKDYNWMMSFTEKLLERICIAVNGTSESTIDGKTI 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    + + EA       D        +      +    ++  + +        +  
Sbjct: 318 SFKAPFRRLPILEAIKEKTGYD-------LEGKTEDEIRAICKELKMEIDDTMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 371 EIFGEFCEGT--FIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++++  +K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 429 DPIDQEERFKEQLRLSEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTT 488

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 489 IQEVLLFPQMRPEK 502


>gi|168274342|dbj|BAG09591.1| lysyl-tRNA synthetase [synthetic construct]
          Length = 597

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 210 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 269

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 270 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 325

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +         + 
Sbjct: 326 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDV 385

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + E   +   + L  T     +  R +L        +      T + +  
Sbjct: 386 DFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 445

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 446 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 503

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 504 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 563

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 564 IKEVLLFPAMKPEDKK 579


>gi|40063229|gb|AAR38056.1| lysyl-tRNA synthetase [uncultured marine bacterium 577]
          Length = 501

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF-------------HYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D              +   R   L R+ I  S+R +F E  ++E+++ 
Sbjct: 146 LRPLPEKFHGLTDQEQKYRQRYLDLISNEDTRKVFLTRSRIIQSIRTFFEERGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +    YL+ +PE   K+L+ +G EK+F    ++RN 
Sbjct: 206 MMHPIPGGAA-ARPFITH---HNALNMDFYLRIAPELYLKRLVVSGMEKVFEINRSFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A++ +  LM     +IR  A  V      S+Q    N  +   
Sbjct: 262 GISTRHNPEFTMLEFYEAYQDHIYLMNLTETLIRELAIKVLGTTEISYQGYKINLSNPFL 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +A  ++          +    DR  L  + +   I    +D    +   +  E  
Sbjct: 322 RLSITQAIQKF-----HPEHTDAQLNDRAYLIKKLEALNISYKPEDGIGKLQLSLFDETT 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP+  S LA     +P  T RFELY    E+ N   EL DP +Q  
Sbjct: 377 E--HLLMDPTFIVDYPSEVSPLARRNDKNPGVTDRFELYITGREMANGFSELNDPEDQAA 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+++++ K+    E    D D++  L   +P ++G  +G DRL+ML+T + +I +VI  
Sbjct: 435 RFQEQVRAKESGDKEAMHYDGDYIRALEHGLPPTAGEGIGIDRLIMLLTDSPSIRDVILF 494

Query: 346 PFSQSN 351
           P  +  
Sbjct: 495 PHLRRE 500


>gi|126305063|ref|XP_001378960.1| PREDICTED: similar to lysyl-tRNA synthetase [Monodelphis domestica]
          Length = 604

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 162/376 (43%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 217 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFITRSKIITYIRSFLDELGFLEIETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 277 MMNVIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +         + 
Sbjct: 333 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVKNITGSYKVSYHPDGPEGQAYDI 392

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 393 DFTPPFRRISMVEELEKALGMKLPETSLFETEETRKILDDICVARDVECPPPRTTARLLD 452

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 453 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKNGLTERFELFVMKKEICNAYTELN 510

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   ID++F   L   +P ++G  MG DRL M +T +NN
Sbjct: 511 DPVRQRQLFEEQAKAKAAGDDEAMVIDDNFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 570

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +  +++
Sbjct: 571 IKEVLLFPAMKPEEKK 586


>gi|254508217|ref|ZP_05120341.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219548834|gb|EED25835.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 407

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R +     ++E+++ 
Sbjct: 46  LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFIIRSKLVSAIRNFMSSKGYLEVETP 105

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 106 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFDRVFEINRNFRNE 161

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM     ++   A  V       +         +  
Sbjct: 162 GLSPRHNPEFTMMEFYQAYADYRDLMDLTEEMLSTVAMDVLGSTSMPYGEETVEFGGKYA 221

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y  +      L   D  DR  +   A+   I V    T   +   I  E 
Sbjct: 222 RMSMFEAIKHYNPDHAEIQALTEADLTDREKMVAIAKSVHIEVESFWTCGQLLEEIFGET 281

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 282 AEPQ--LIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 339

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRL ML T  + I +VI 
Sbjct: 340 ARFKAQVDAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVIL 399

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 400 FPAMRPQ 406


>gi|29374909|ref|NP_814062.1| lysyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227520053|ref|ZP_03950102.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227555914|ref|ZP_03985961.1| lysyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229550491|ref|ZP_04439216.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255974768|ref|ZP_05425354.1| lysyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256762063|ref|ZP_05502643.1| lysyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256956804|ref|ZP_05560975.1| lysyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256960609|ref|ZP_05564780.1| lysyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964191|ref|ZP_05568362.1| lysyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257078473|ref|ZP_05572834.1| lysyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257081555|ref|ZP_05575916.1| lysyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257084203|ref|ZP_05578564.1| lysyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257088030|ref|ZP_05582391.1| lysyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257417633|ref|ZP_05594627.1| lysyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257418642|ref|ZP_05595636.1| lysyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|293382696|ref|ZP_06628621.1| lysine--tRNA ligase [Enterococcus faecalis R712]
 gi|293388122|ref|ZP_06632649.1| lysine--tRNA ligase [Enterococcus faecalis S613]
 gi|294779306|ref|ZP_06744709.1| lysine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307268521|ref|ZP_07549896.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307274232|ref|ZP_07555440.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307278667|ref|ZP_07559737.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|312908592|ref|ZP_07767534.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909260|ref|ZP_07768117.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|39932158|sp|Q839A8|SYK_ENTFA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29342367|gb|AAO80133.1| lysyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227072601|gb|EEI10564.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227174971|gb|EEI55943.1| lysyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|229304348|gb|EEN70344.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255967640|gb|EET98262.1| lysyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256683314|gb|EEU23009.1| lysyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256947300|gb|EEU63932.1| lysyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256951105|gb|EEU67737.1| lysyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954687|gb|EEU71319.1| lysyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256986503|gb|EEU73805.1| lysyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256989585|gb|EEU76887.1| lysyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256992233|gb|EEU79535.1| lysyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256996060|gb|EEU83362.1| lysyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257159461|gb|EEU89421.1| lysyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257160470|gb|EEU90430.1| lysyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|291079856|gb|EFE17220.1| lysine--tRNA ligase [Enterococcus faecalis R712]
 gi|291082498|gb|EFE19461.1| lysine--tRNA ligase [Enterococcus faecalis S613]
 gi|294453592|gb|EFG21991.1| lysine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306504727|gb|EFM73927.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306509194|gb|EFM78256.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306515182|gb|EFM83722.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310625379|gb|EFQ08662.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290502|gb|EFQ69058.1| lysyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|315026774|gb|EFT38706.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315032988|gb|EFT44920.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315036599|gb|EFT48531.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315147110|gb|EFT91126.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315151137|gb|EFT95153.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315168161|gb|EFU12178.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315171399|gb|EFU15416.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315172632|gb|EFU16649.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315573576|gb|EFU85767.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315582076|gb|EFU94267.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0309A]
 gi|329577256|gb|EGG58720.1| lysine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 498

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 167/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N ++E+++ 
Sbjct: 147 LRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDMDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ +M     IIR AA +V      ++     +  S  +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAVDLGSPFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +   +          A++  + +    T   I +      +
Sbjct: 323 RLHMVDAVKEQTGVDFWQEMTIEE------ARALAKEHNVEITDAMTVGHIINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EDT--LQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ +E+++  +E + +DEDF+  L   +P + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PTMR 498


>gi|227552660|ref|ZP_03982709.1| lysyl-tRNA synthetase [Enterococcus faecium TX1330]
 gi|257888628|ref|ZP_05668281.1| lysyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257897417|ref|ZP_05677070.1| lysyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378825|ref|ZP_06624980.1| lysine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227178189|gb|EEI59161.1| lysyl-tRNA synthetase [Enterococcus faecium TX1330]
 gi|257824682|gb|EEV51614.1| lysyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257833982|gb|EEV60403.1| lysyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292642366|gb|EFF60521.1| lysine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 498

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 104/364 (28%), Positives = 164/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N +IE+++ 
Sbjct: 147 LRPLPDKYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYLDGNGYIEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDIDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M     IIR AA +V      ++     +  S+ +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +              A++  + V        + +      +
Sbjct: 323 RIHMVDAIKEQTGVDFWKEMT------LEEALALAEKHNVEVTEAMGVGHVINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EET--LTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFTELNDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +E++   +E + +DEDFL  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEAQEKERELGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PTMR 498


>gi|5031815|ref|NP_005539.1| lysyl-tRNA synthetase isoform 2 [Homo sapiens]
 gi|20178333|sp|Q15046|SYK_HUMAN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|2366752|dbj|BAA22084.1| Lysyl tRNA Synthetase [Homo sapiens]
 gi|13278705|gb|AAH04132.1| Lysyl-tRNA synthetase [Homo sapiens]
 gi|119616026|gb|EAW95620.1| lysyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
 gi|123982972|gb|ABM83227.1| lysyl-tRNA synthetase [synthetic construct]
 gi|123997649|gb|ABM86426.1| lysyl-tRNA synthetase [synthetic construct]
          Length = 597

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 210 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 269

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 270 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 325

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +         + 
Sbjct: 326 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDV 385

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + E   +   + L  T     +  R +L        +      T + +  
Sbjct: 386 DFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 445

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 446 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 503

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 504 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 563

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 564 IKEVLLFPAMKPEDKK 579


>gi|332685807|ref|YP_004455581.1| lysyl-tRNA synthetase (class II) [Melissococcus plutonius ATCC
           35311]
 gi|332369816|dbj|BAK20772.1| lysyl-tRNA synthetase (class II) [Melissococcus plutonius ATCC
           35311]
          Length = 498

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 164/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N +IE+++ 
Sbjct: 147 LRPLPDKYHGLTNIEQRYRQRYLDLISNKESFDRFIKRSQIISEIRRYLDSNGYIEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDIDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M     IIR  A +V  +   ++     +     +
Sbjct: 263 GIDTTHNPEFTMMEVYTAYTDYRDVMDLTEGIIRNVAEKVLGKTDITYGGQPVDLGKAFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      ID    +              A++  + +  +     I +      +
Sbjct: 323 RVHMVDAIKEQVGIDFWPKMT------LDEARTLAKEYKVEITDNMMVGHIINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EDT--LQDPTFVYGHPVEVSPLAKKNEQDPRFTDRFELFIVGKEFANAFTELNDPIDQRS 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ +E+++  +E + +DEDFL  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEEQEKEREQGNDEAHGVDEDFLESLEYGMPPTGGLGIGMDRLVMLLTDAPSIRDVLLF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PTLR 498


>gi|258592406|emb|CBE68715.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [NC10 bacterium
           'Dutch sediment']
          Length = 500

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 94/369 (25%), Positives = 166/369 (44%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    +R+R               KR+ + + +R +F   +F+E+++ 
Sbjct: 137 LRPLPEKWHGLTDVETRFRQRYLDLIVNRQVADAFRKRSRLIAEIRRFFESREFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G     R F T     + +   LYL+ +PE   K+L+  G +++F     +RN 
Sbjct: 197 MMQSMAGGAM-ARPFVTH---HNALDIKLYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE LM     ++   A+ +   +  ++Q    +      
Sbjct: 253 GISTQHNPEFTMLEFYQAYADYEDLMAMTEEMLAHLAKGITGDQQVTYQGQQISFAPPWP 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +   ++               +   A   GI +        + + +    +
Sbjct: 313 KLTLEEALVKVGGLEAEA------LTTEEGVRATAGHHGITILPGWGKGKVMAELFDTLV 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P   +RFEL+   +E+ NA  EL DP EQR 
Sbjct: 367 ESK--LIQPTFIIDFPTELSPLAKATQGEPTTVQRFELFIGGMEIANAYSELNDPREQRI 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++++ +   E + +DEDFL  L   MP ++G  +G DRL ML+T + +I +VI  
Sbjct: 425 RFLDQLRQRDQGDLEAHGLDEDFLRALEYGMPPTAGEGIGIDRLAMLLTDSPSIRDVILF 484

Query: 346 PFSQSNQEE 354
           P  +  Q E
Sbjct: 485 PLLKPAQGE 493


>gi|311280819|ref|YP_003943050.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308750014|gb|ADO49766.1| lysyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 506

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 162/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 151 LRPLPDKFHGLQDQEARYRQRYLDLIANDESRNTFKIRSQILAGMRKFMVGRGFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 211 MMQVIPGGAS-ARPFITH---HNALDMDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V  +    +     +      
Sbjct: 267 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGKTEVPYGEHTFDFGKPFV 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  +       A+  GI V        I + I  E  
Sbjct: 327 KLTMREAIKKY-----RPETNMADLDNFDAAKAIAESIGIHVEKSWGLGRIVTEIFDEVA 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 382 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 440 RFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 499

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 500 PALRPVK 506


>gi|77359476|ref|YP_339051.1| lysyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|76874387|emb|CAI85608.1| lysyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 511

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 89/378 (23%), Positives = 160/378 (42%), Gaps = 30/378 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ +   +R +  +  F+E+++ 
Sbjct: 139 LRPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 199 MLQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------- 157
                H PEFTM+E+Y+A+  Y  LM    +++R  AE                      
Sbjct: 255 GLSTRHNPEFTMIEFYQAYADYIDLMNITEDMLRTVAENVLGSAVVVNTTKDENGEVIDS 314

Query: 158 -NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              +       +++++A  +Y N +    + N  +     L   A+Q  +++  +  W  
Sbjct: 315 VEYDFGQPFTRLSMSDAILKY-NPEFDAAVFNDPENHFEQLKAYAKQVHVKIPENCVWGP 373

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
                 I +      +   T +  YP   S LA     +   T RFE +    EL N   
Sbjct: 374 GKFLCEIFEETAEHMLIQPTFITGYPWEVSPLARRNDENSFVTDRFEFFVGGRELANGFS 433

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL D  +Q  RF ++++EK    +E    DED++  L   +P ++G  +G DRLVML T 
Sbjct: 434 ELNDAQDQAERFTRQVEEKDAGDDEAMHYDEDYIRALEYGLPPTAGEGIGIDRLVMLFTD 493

Query: 336 ANNINEVIWTPFSQSNQE 353
           +  I +VI  P  +   +
Sbjct: 494 SPTIKDVILFPHMRPQAD 511


>gi|159904285|ref|YP_001551629.1| lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687128|sp|A9BD62|SYK_PROM4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|159889461|gb|ABX09675.1| Lysyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 503

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 154/367 (41%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R ++ S++R +  E  F+EI++ 
Sbjct: 144 LQPLPDKWHGLSDVEKRYRQRYVDLIVNPQSRKTFRSRALMVSAIRRWLDERDFLEIETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLQSEAGGA-EARPFITH---HNTLDLSLYLRIATELHLKRLVVGGFERVYELGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A   Y  +M     +I    +++       +Q    +      
Sbjct: 260 GISTRHNPEFTTVEIYQAFADYTDMMDLTEEMISFVCSQICGSTTIQYQGKEVDLTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
            IT+ E       +D           D        Q  G+ V    D+   + +    + 
Sbjct: 320 RITMHELVLESTGLDFYEFGQ-----DISKASTAMQSVGLNVPDHADSVGRLMNEAFEQA 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL+DP++Q+
Sbjct: 375 VE--GDLFQPTFVMDYPIEISPLARKHRSKPGIVERFELFIAGRETANAFSELIDPVDQK 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R   +   ++    E + IDEDF+  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 433 ERLLLQQSRRQAGDLEAHVIDEDFVNALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPLLKPE 499


>gi|119357536|ref|YP_912180.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119354885|gb|ABL65756.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 509

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 106/377 (28%), Positives = 171/377 (45%), Gaps = 39/377 (10%)

Query: 1   MHQIPSQP-------------WWNRDFHYRRRPF-----------LLKRNMIQSSLREYF 36
           +  IP                + +++  YR+R              +KR+ I S +R +F
Sbjct: 146 LRPIPIAKEKEIDGQKVVYDAFSDKELRYRQRYVDLIVNPDVRQTFIKRSAIVSFMRGFF 205

Query: 37  VENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
               ++E+++  LQ   G     R F+T     + +   LYL+ + E   K+L+  G + 
Sbjct: 206 TGQGWLEVETPILQPIYGGAA-ARPFTTH---HNALDMQLYLRIANELYLKRLIVGGFDG 261

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQ 155
           +F FA  +RN      H PEFT +E Y A++ YE +MK    +    A   N      F 
Sbjct: 262 VFEFAKDFRNEGIDRFHNPEFTQVELYVAYKDYEWMMKLVEELFYQTACAVNNSDSVVFL 321

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
             + +       +T+ ++   Y  ID+          D H L   A+  G+ +    +  
Sbjct: 322 GNDISLKPPFRRLTITDSIKEYCGIDITD-------KDEHELRYMARDLGLELDPKISSG 374

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            I   I  E +EP   +   T +  YP   S LA  + + P F +RFEL A   ELCN+ 
Sbjct: 375 KIIDEIFGEFVEPK--LIQPTFITDYPVEMSPLAKEHRSKPGFVERFELIAGGKELCNSF 432

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP+ QR R E + + +++   E   +DEDFL  L   MP  +G+ +G DR+VML+T
Sbjct: 433 SELNDPVIQRERLEAQAKLRQRGDEEAMIVDEDFLRALEYGMPPCAGLGVGVDRMVMLLT 492

Query: 335 GANNINEVIWTPFSQSN 351
           G ++I +VI+ P  +  
Sbjct: 493 GQDSIRDVIFFPHLKPE 509


>gi|300861816|ref|ZP_07107896.1| lysine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|300848341|gb|EFK76098.1| lysine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|315145398|gb|EFT89414.1| lysyl-tRNA synthetase [Enterococcus faecalis TX2141]
          Length = 498

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 102/364 (28%), Positives = 167/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N ++E+++ 
Sbjct: 147 LRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDMDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ +M     IIR AA +V      ++     +  S  +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAVDLGSPFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + +A+A      +D    +              A++  + +    T   I +      +
Sbjct: 323 RLHMADAVKEQTGVDFWQEMTI------EEARALAKEHNVEITDAMTVGHIINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EDT--LQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ +E+++  +E + +DEDF+  L   +P + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PTMR 498


>gi|332221730|ref|XP_003260017.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Nomascus leucogenys]
          Length = 597

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 163/376 (43%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 210 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 269

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 270 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 325

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +         + 
Sbjct: 326 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDI 385

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I + E   +   + L  T     +  R +L        +      T + +  
Sbjct: 386 DFTPPFQRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 445

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 446 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 503

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP++QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 504 DPMQQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 563

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  + + ++
Sbjct: 564 IKEVLLFPAMKPDDKK 579


>gi|134296299|ref|YP_001120034.1| lysyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166229801|sp|A4JFZ6|SYK_BURVG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|134139456|gb|ABO55199.1| lysyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 508

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 154/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    SS+R +     F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTKTISSIRRFMENADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFITH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V+     +     + +   
Sbjct: 325 RLTITQAIQKYA-----PQYTDGQLSDDAFLRTELKRLGVDVSQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAESQLWEPTYIIDYPVEVSPLARASDTVPGITERFELFMTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFKKQVEQKDAGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|256842571|ref|ZP_05548073.1| lysyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256735927|gb|EEU49259.1| lysyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 576

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 91/374 (24%), Positives = 152/374 (40%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  I  ++R    E  
Sbjct: 142 LRPLPVVKYKDGVAYDGFNDPELRYRQRYVDLVVNEGVKDIFMKRAAIIKTMRTALDEAG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ   G  +  R F T     + +   LYL+ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPILQSIAGGAS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNC 159
              +RN      H PEFT +E Y  ++ Y  +M     ++       N     +      
Sbjct: 258 GKNFRNEGMDRTHNPEFTCMELYVQYKDYNWMMSFTEKLLERICIAVNGTSESTIDGKTI 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    + + EA       D        +      +    ++  + +        +  
Sbjct: 318 SFKAPFRRLPILEAIKEKTGYD-------LEGKTEDEIRAICKELKMEIDDTMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 371 EIFGEFCEGT--FIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++++  +K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 429 DPIDQEERFKEQLRLSEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTT 488

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 489 IQEVLLFPQMRPEK 502


>gi|46450201|gb|AAS96849.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
          Length = 501

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 160/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR +I    R +     F+E+++ 
Sbjct: 146 IRPLPEKYHGLKDVEIRYRQRYVDLIVTPRARDIFRKRTIIVREFRRFLEARGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   LY++ +PE   K+LL  G EK+F     +RN 
Sbjct: 206 MMQAIPGGAT-AKPFVT---FHNALDMQLYMRIAPELYLKRLLVGGFEKVFEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--P 165
                H PEFTM E+Y A+ ++E LM     +    A                  +    
Sbjct: 262 GISTQHNPEFTMCEFYWAYATFEDLMDLTEELFSHIAREVCGSSVITYQGQEVDLTPGKW 321

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +T  E+  +                D   +    ++ G +V   +    + +++    
Sbjct: 322 VRLTFHESLEKVGG------HSPEFYNDYEKVRAYVRERGEKVLQGEKLGKLQAKLFDLD 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP   S L+     +P  T RFEL+    EL NA  EL DP++QR
Sbjct: 376 VEPR--LIQPTFIYHYPTDISPLSRRNEQNPDVTDRFELFITGRELANAFSELNDPVDQR 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +++EK+   +E + +DED+L  L   MP ++G  +G DRLVML+T + +I EVI 
Sbjct: 434 MRFEDQVKEKEAGDDEAHFMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSPSIREVIL 493

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 494 FPLLKPE 500


>gi|220934634|ref|YP_002513533.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|259511536|sp|B8GRJ2|SYK_THISH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|219995944|gb|ACL72546.1| lysyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 499

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  +   +R++  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLSDTETRYRQRYVDLIMNEPVRETFRTRTRVIQFIRQFLDQRGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F+T       +   L+L+ +PE   K+L+  G E+++     +RN 
Sbjct: 204 MMQAIPGGAT-ARPFATH---HHALDMQLFLRIAPELYLKRLVVGGFERVYEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y  LM    +++R    EV       +Q    +      
Sbjct: 260 GLSTRHNPEFTMVEFYEAYANYHDLMDLTEDLLRDLTLEVLGSTQVHYQGETYDFERPFT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV E+  ++        +   +  D       AQ+ GI +        ++  I  + +
Sbjct: 320 RMTVKESILQH-----NPDVSEAELADLERARAVAQRLGIPLKDSYGLGKVWIEIFEKTV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   T +  YP   S LA     DP  T RFE +    E+ N   EL D  +Q  
Sbjct: 375 EGN--LKDPTFITAYPTEVSPLARRNDEDPFVTDRFEFFVGGREIANGFSELNDYEDQAE 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K++QEK+   +E    D D+L  L   MP ++G  +G DRLVML+T + +I +V+  
Sbjct: 433 RFRKQVQEKEAGDDEAMHFDADYLRALEHGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLF 492

Query: 346 PFSQSN 351
           P  +  
Sbjct: 493 PHMRPE 498


>gi|317405232|gb|EFV85570.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 507

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 149/368 (40%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+    S+R++ +   F+E+++ 
Sbjct: 148 LRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKAMGSIRQFMLNAGFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 208 MLHPIPGGAA-AKPFVTH---HNALDMEMFLRIAPELYLKRLIVGGFERVFEVNRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   Y  LM     +IR AA       + ++Q    +     +
Sbjct: 264 GVSPRHNPEFTMMEFYAAFADYRWLMDFTEELIRQAAISATGSAVLTYQERELDLSKPFD 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +YA              D   +  + ++ G               + +   
Sbjct: 324 RLTICEAILKYA-----PGYTQAQLDDVAFVRAELKKLGADADGPVLARAGLGALQLALF 378

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 379 EETAEAKLWNPTYIIDYPVEVSPLARASDTREGITERFELFMTGREIANGFSELNDPEDQ 438

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  +++ K     E    D D++  L   MP + G  +G DRLVML+T + +I +VI
Sbjct: 439 AERFRSQVEAKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVI 498

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 499 LFPHLRRE 506


>gi|295694794|ref|YP_003588032.1| lysyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410396|gb|ADG04888.1| lysyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 513

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 162/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++    +D   R R                + R+ I   +R +  +  F+E+++ 
Sbjct: 160 LRPLPTKWHGLKDVELRYRHRYVDLIVNPQVRETFVLRSRIIRVMRRFLDDQGFLEVETP 219

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++Q   G     R F T     + +   LY++ + E   K+L+  G E+++     +RN 
Sbjct: 220 TMQSVAGGAA-ARPFVTH---HNALNMELYMRIAMELHLKRLIVGGLERVYEIGRVFRNE 275

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  +  +M    N+I   A  V       +Q    +      
Sbjct: 276 GISTKHNPEFTMMELYQAYADFRDMMDLTENLIVTIAREVLGTTQIQYQGQAVDLTPPWR 335

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             ++ +    Y  ID                   A+  G+++     +  I +    +K+
Sbjct: 336 RESMMDLIQHYTGIDFRQVSGT------EQARELAENCGVKIDPGMEFGHIVNECFEQKV 389

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA    ADPR T RFEL+    E  NA  EL DP++QR 
Sbjct: 390 EQH--LVQPTFVYGYPVEISPLAKRSAADPRLTDRFELFIVGREHANAFSELNDPVDQRK 447

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E+ K  +E + +DEDF+  L   MP + G+ +G DRLVML+T   +I +V+  
Sbjct: 448 RFLDQLEERAKGNDEAHEMDEDFVMALEYGMPPTGGLGIGVDRLVMLLTDQASIRDVLLF 507

Query: 346 PFSQ 349
           P  +
Sbjct: 508 PLMR 511


>gi|114663756|ref|XP_511115.2| PREDICTED: lysyl-tRNA synthetase isoform 2 [Pan troglodytes]
          Length = 611

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 224 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 283

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 284 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRVAPELYHKMLVVGGIDRVYEIGRQFRNE 339

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +         + 
Sbjct: 340 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDV 399

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + E   +   + L  T     +  R +L        +      T + +  
Sbjct: 400 DFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 459

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 460 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 517

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 518 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 577

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 578 IKEVLLFPAMKPEDKK 593


>gi|229546902|ref|ZP_04435627.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|255971768|ref|ZP_05422354.1| lysyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256855222|ref|ZP_05560583.1| lysyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|257088707|ref|ZP_05583068.1| lysyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|307290186|ref|ZP_07570104.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|312904623|ref|ZP_07763778.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312952668|ref|ZP_07771532.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229307830|gb|EEN73817.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|255962786|gb|EET95262.1| lysyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256709735|gb|EEU24782.1| lysyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256997519|gb|EEU84039.1| lysyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|306498742|gb|EFM68241.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|310629456|gb|EFQ12739.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310631975|gb|EFQ15258.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315028813|gb|EFT40745.1| lysyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315153548|gb|EFT97564.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315156272|gb|EFU00289.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315158583|gb|EFU02600.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315160788|gb|EFU04805.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315579387|gb|EFU91578.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|323479481|gb|ADX78920.1| lysyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 498

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N ++E+++ 
Sbjct: 147 LRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDMDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ +M     IIR AA +V      ++     +  S  +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAVDLGSPFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +              A++  + +    T   I +      +
Sbjct: 323 RLHMVDAVKEQTGVDFWQEMTI------EEARALAKEHNVEITDAMTVGHIINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EDT--LQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ +E+++  +E + +DEDF+  L   +P + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PTMR 498


>gi|260588923|ref|ZP_05854836.1| lysine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540702|gb|EEX21271.1| lysine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 646

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I +S+R Y     F+E+++ 
Sbjct: 142 LKPLPEKFHGLTNTDLRYRQRYVDLIMNADVKDTFIKRSKIIASIRNYLNGQGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G EK++     +RN 
Sbjct: 202 MLVANAGGAA-ARPFETHF---NALDEDFKLRISLELYLKRLIVGGMEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V       +  +  +     E
Sbjct: 258 GLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRHVAQEVLGTTKIVYNGIEMDLGKPFE 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D                   A++  +         DI S    E  
Sbjct: 318 RITMVDAVKKYAGVDFNEIHT------LKEAREVAKEHHVEYEERHKKGDILSLFFEEFA 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFE +    E+ NA  EL DPI+QR 
Sbjct: 372 EEH--LIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDF+  L   M  + GI  G DR+VML+T +  I +V+  
Sbjct: 430 RFKAQEELLAQGDEEANTTDEDFMNALEIGMAPTGGIGFGIDRMVMLLTDSAAIRDVLLF 489

Query: 346 PFSQSN 351
           P  +S 
Sbjct: 490 PTMKSQ 495


>gi|311234489|gb|ADP87343.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 527

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 160/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR +I    R +     F+E+++ 
Sbjct: 172 IRPLPEKYHGLKDVEIRYRQRYVDLIVTPRARDIFRKRTIIVREFRRFLEARGFMEVETP 231

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   LY++ +PE   K+LL  G EK+F     +RN 
Sbjct: 232 MMQAIPGGAT-AKPFVT---FHNALDMQLYMRIAPELYLKRLLVGGFEKVFEINRNFRNE 287

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--P 165
                H PEFTM E+Y A+ ++E LM     +    A                  +    
Sbjct: 288 GISTQHNPEFTMCEFYWAYATFEDLMDLTEELFSHIAREVCGSSVITYQGQEVDLTPGKW 347

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +T  E+  +                D   +    ++ G +V   +    + +++    
Sbjct: 348 VRLTFHESLEKVGG------HSPEFYNDYEKVRAYVRERGEKVLQGEKLGKLQAKLFDLD 401

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP   S L+     +P  T RFEL+    EL NA  EL DP++QR
Sbjct: 402 VEPR--LIQPTFIYHYPTDISPLSRRNEQNPDVTDRFELFITGRELANAFSELNDPVDQR 459

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +++EK+   +E + +DED+L  L   MP ++G  +G DRLVML+T + +I EVI 
Sbjct: 460 MRFEDQVKEKEAGDDEAHFMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSPSIREVIL 519

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 520 FPLLKPE 526


>gi|241890039|ref|ZP_04777337.1| lysyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863661|gb|EER68045.1| lysyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 499

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR              + R+ I   +R Y  E  ++E+++ 
Sbjct: 146 LRPLPDKFHGLKDVEERYRRRYVDLIMNEESKETFILRSKIIQIMRSYLNERGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   L+++ + E   K+L+  G EK++    A+RN 
Sbjct: 206 MMHSVAGGAA-ARPFVTH---HNALDMQLFMRIALELPLKRLIVGGLEKVYEIGRAFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    ++I      +       +     +   +  
Sbjct: 262 GVSTRHNPEFTMIELYEAYADYNDIMDLTESMIAYICNEIHGTTKVMYGEDEIDLTPKWR 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    + +         +  A++  + V  D     I +      +
Sbjct: 322 RVHMVDAIKEVTGVDFWPEMTD------EQAHALAKEHNVPVRKDMKVGHIINEFFETFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 376 EET--LVQPTFVYGHPVEVSPLAKTNAEDTRFTDRFELFIVRREHANAFSELNDPIDQKE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +M EK     E Y +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 434 RFLSQMDEKDAGNEEVYEMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNSASIRDVLLF 493

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 494 PYMKHK 499


>gi|327534065|gb|AEA92899.1| lysine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 498

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 99/364 (27%), Positives = 165/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N ++E+++ 
Sbjct: 147 LRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDMDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ +M     IIR    +V      ++     +  S  +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNATEKVLGTTDITYDGQAVDLGSPFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +   +          A++  + +    T   I +      +
Sbjct: 323 RLHMVDAVKEQTGVDFWQEMTIEE------ARALAKEHNVEITDAMTVGHIINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EDT--LQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ +E+++  +E + +DEDF+  L   +P + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PTMR 498


>gi|120601936|ref|YP_966336.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|120562165|gb|ABM27909.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 501

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 160/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR +I    R +     F+E+++ 
Sbjct: 146 IRPLPEKYHGLKDVEIRYRQRYVDLIVTPRARDIFRKRTIIVREFRRFLEARGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   LY++ +PE   K+LL  G EK+F     +RN 
Sbjct: 206 MMQAIPGGAT-AKPFVT---FHNALDMQLYMRIAPELYLKRLLVGGFEKVFEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--P 165
                H PEFTM E+Y A+ ++E LM     +    A                  +    
Sbjct: 262 GISTQHNPEFTMCEFYWAYATFEDLMDLTEELFSHIAREVCGSSVITYQGQEVDLTPGKW 321

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +T  E+  +                D   +    ++ G +V   +    + +++    
Sbjct: 322 VRLTFHESLEKVGG------HSPEFYNDYEKVRAYVRERGEKVLQGEKLGKLQAKLFDLD 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP   S L+     +P  T RFEL+    EL NA  EL DP++QR
Sbjct: 376 VEPR--LIQPTFIYHYPTDISPLSRRNEQNPDVTDRFELFITGRELANAFSELNDPVDQR 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +++EK+   +E + +DED+L  L   MP ++G  +G DRLVML+T + +I EVI 
Sbjct: 434 MRFEDQVKEKEAGDDEAHFMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSPSIREVIL 493

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 494 FPLLKPE 500


>gi|255281438|ref|ZP_05345993.1| lysine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255267926|gb|EET61131.1| lysine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 649

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 159/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I S++R Y     F+E+++ 
Sbjct: 145 LQILPEKFHGLTNTDLRYRQRYVDLIMNPEVKDTFVKRSRIISAIRRYLDGQGFMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + L L+ S E   K+L+  G EK++     +RN 
Sbjct: 205 MLVQNAGGAA-ARPFETHF---NALNEDLKLRISLELYLKRLIVGGLEKVYEIGRVFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V       +  V  +     E
Sbjct: 261 GLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRYVAQEVLGTTKIVYNGVEMDLGKPFE 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D                   A++  +         DI +    E  
Sbjct: 321 RITMVDAVKKYAGVDFNEIHT------LEEARAAAKEHHVEYEERHKKGDILNLFFEEFA 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E ++     T +  +P   S L    P +P + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 375 EEHM--IQPTFVMDHPIEISPLTKKKPENPEYVERFEFFMNGWEMANAYSELNDPIDQRE 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+++  +  +   E    DEDFL  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 433 RFKEQEAQLAQGNEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTDSQAIRDVLLF 492

Query: 346 PFSQSN 351
           P  +S 
Sbjct: 493 PTMKSQ 498


>gi|163857080|ref|YP_001631378.1| lysyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|226710883|sp|A9IQY2|SYK_BORPD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|163260808|emb|CAP43110.1| lysyl-tRNA synthetase [Bordetella petrii]
          Length = 506

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+    S+R+  ++  F+E+++ 
Sbjct: 147 LRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFETRSKAVGSIRQVMLDAGFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 207 MLHPIPGGAA-AKPFVTH---HNALDMEMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    +++R AA  A    + ++Q+   +     +
Sbjct: 263 GVSPRHNPEFTMMEFYAAYADYRWLMDFTEHVLRQAAIAATGSAVLTYQDRELDLSRPFD 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +YA              D   +  + ++ G  V            + +   
Sbjct: 323 RLTICEAILKYA-----PAYTQAQLDDAAFVRAELKKLGADVDGPVLARAGLGALQLALF 377

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 378 EETAEAQLWNPTYIIDYPVEVSPLARASDTRPGITERFELFMTGREIANGFSELNDPEDQ 437

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  +++ K     E    D D++  L   MP + G  +G DRLVML+T + +I +VI
Sbjct: 438 AERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTNSPSIRDVI 497

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 498 LFPHLRRE 505


>gi|312884020|ref|ZP_07743737.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368478|gb|EFP96013.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 505

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + +++R +     ++E+++ 
Sbjct: 144 LRPLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFIVRSKLVAAIRNFMSSKGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 204 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFDRVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++   A EV       + +       +  
Sbjct: 260 GLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSSVALEVLGSTSMPYGDETVEFGGKYA 319

Query: 167 YITVAEAFARYANIDLG-TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y         L   D  DR  +   A+   + V    T   +   I  E 
Sbjct: 320 RMSMFEAIKHYNPEHREIQALTESDLQDREKMVSIAKSVHVEVESFWTCGQLLEEIFGET 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 380 AEPQ--LIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++Q K    +E    D D++  L   +P ++G  +G DRL ML T  + I +VI 
Sbjct: 438 ARFKAQVQAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVIL 497

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 498 FPAMRPQ 504


>gi|217970370|ref|YP_002355604.1| lysyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217507697|gb|ACK54708.1| lysyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 513

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 156/366 (42%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ +  S+R Y   + F+E+++ 
Sbjct: 148 LRPLPDKFHGLTDVEQKYRQRYVDLIMNEQSRFTFVARSRMVQSIRNYMTGHGFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F+T     + +   L+L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 208 MMHPIPGGAA-AKPFTTH---HNALDMELFLRIAPELYLKRLVVGGLEKVFEVNRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y+ LM     +IR AA      + F +Q    +      
Sbjct: 264 GLSPRHNPEFTMMEFYEAYANYKTLMDFTEGLIRHAAREALGTESFVYQGRELDLSKPFH 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y               D   L  +    G +V        +  ++     
Sbjct: 324 RLTIVQAIRKY-----HPGFTAEQLADAAWLKEKIVAFGEKVKPG-GLGSLQLQLFEACA 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T+RFEL+    E+ N   EL DP +Q  
Sbjct: 378 EAE--LWEPTFIIDYPVEVSPLARASDTDPEITERFELFIVGREIANGFSELNDPEDQAA 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++ K+    E    D D++  L   +P + G  +G DRLVML+T A  I +VI  
Sbjct: 436 RFRAQVEAKEAGDEEAMYYDADYIRALEYGLPPTGGCGIGIDRLVMLLTDAPAIRDVILF 495

Query: 346 PFSQSN 351
           P  +  
Sbjct: 496 PQMRPE 501


>gi|225569856|ref|ZP_03778881.1| hypothetical protein CLOHYLEM_05950 [Clostridium hylemonae DSM
           15053]
 gi|225161326|gb|EEG73945.1| hypothetical protein CLOHYLEM_05950 [Clostridium hylemonae DSM
           15053]
          Length = 646

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 155/365 (42%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I S++R Y     F+E+++ 
Sbjct: 142 LQILPEKFHGLTNTDTRYRQRYVDLIMNPEVRDTFIKRSHIISAIRRYLDGQGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G EK++     +RN 
Sbjct: 202 MLVSNAGGAA-ARPFETHF---NALSEDFKLRISLELYLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V       +  V  +     E
Sbjct: 258 GLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTTTIVYNGVEMDLGKPFE 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D                   A +  +         DI S    E  
Sbjct: 318 RITMIDAVKKYAGVDWNEVHT------LEEARALADKHHVEYEDRHKKGDILSLFFEEFA 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P DP + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 372 EEH--LIQPTFVMDHPIEISPLTKKKPEDPEYVERFEFFMNGWEMANAYSELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +   +   E    DEDFL  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 430 RFRAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLMTDSAAIRDVLLF 489

Query: 346 PFSQS 350
           P  +S
Sbjct: 490 PTMKS 494


>gi|210632437|ref|ZP_03297365.1| hypothetical protein COLSTE_01262 [Collinsella stercoris DSM 13279]
 gi|210159532|gb|EEA90503.1| hypothetical protein COLSTE_01262 [Collinsella stercoris DSM 13279]
          Length = 661

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 2   HQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     +++  YR+R               KR+ I S+ R Y  ++ ++E+++  
Sbjct: 148 RPLPEKFHGLSDKETRYRQRYVDLIVNEDVRETFRKRSAIISTFRRYMEDDGYMEVETPI 207

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  T  + F T     + + +  YL+ + E   K+LL  G E++F     +RN  
Sbjct: 208 LQSIQGGAT-AKPFITHF---NALNQENYLRIATELHLKRLLVGGYERVFEIGRIFRNEG 263

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEY 167
               H PEFT +E YRA+   E + +    +I+ AA     + I  +Q    + FS    
Sbjct: 264 MDLTHNPEFTTMEAYRAYSDLEGMKELAEGVIKAAATAVGLEGIIEYQGQQIDLFSPWAS 323

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            ++ E  +           +         L+    + GI    + T   + + I  E  E
Sbjct: 324 RSMTEIVSDVLG------REVTLDTPVEELFAACAERGIETKPEWTAGKLIAEIYDELGE 377

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               I   T +  YP   S LA     DPR T RFEL     E  NA  EL DP++Q  R
Sbjct: 378 DT--IVNPTFVCDYPVEVSPLAKRNEEDPRLTHRFELVIAGHEYANAFSELNDPVDQAER 435

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  +M EK    +E    DED++  L   MP + GI +G DR+VML+T + +I +V+  P
Sbjct: 436 FAAQMAEKAGGDDEAMEYDEDYVRALEYGMPPAGGIGIGIDRVVMLLTNSTSIRDVLLFP 495

Query: 347 FSQSN 351
             +  
Sbjct: 496 HMKPE 500


>gi|257879864|ref|ZP_05659517.1| lysyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|294618638|ref|ZP_06698177.1| lysyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|257814092|gb|EEV42850.1| lysyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|291595157|gb|EFF26495.1| lysyl-tRNA synthetase [Enterococcus faecium E1679]
          Length = 498

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 104/364 (28%), Positives = 164/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N +IE+++ 
Sbjct: 147 LRPLPDKYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYLDGNGYIEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDIDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M     IIR AA +V      ++     +  S+ +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +              A++  + V        + +      +
Sbjct: 323 RIHMVDAIKEQTGVDFWQEMT------LEEALALAEKHNVEVTEAMGVGHVINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EET--LTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFTELNDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +E++   +E + +DEDFL  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEAQEKERELGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PTMR 498


>gi|323497778|ref|ZP_08102792.1| lysyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323317125|gb|EGA70122.1| lysyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 505

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + SS+R +     ++E+++ 
Sbjct: 144 LRPLPEKFHGLTDQEMRYRQRYVDLIVNQDSREAFIIRSKLVSSIRNFMSSKGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 204 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFDRVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++   A  V       +            
Sbjct: 260 GLSPRHNPEFTMMEFYQAYSDYKDLMDLTEEMLSTVAMDVLGSTSMPYGEETVEFGGTYA 319

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y  +      L   D  DR  +   A+   + V    T   +   I  E 
Sbjct: 320 RMSMFEAIKHYNPDHAEIQALTEADLQDREKMVAIAKSVHVEVETFWTCGQLLEEIFGET 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 380 AEPQ--LIQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRL ML T  + I +VI 
Sbjct: 438 ARFKAQVDAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLAMLFTNTHTIRDVIL 497

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 498 FPAMRPQ 504


>gi|331701912|ref|YP_004398871.1| Lysyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329129255|gb|AEB73808.1| Lysyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 501

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 164/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR  I S++R+Y   N + E+++ 
Sbjct: 142 LRPLPDKFHGLKDKEQRYRQRYLDLISNQDSFDRFVKRTKIVSAVRKYLDSNDYQEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  S G   + R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 202 VLHNSAGGA-NARPFITH---HNALNIDLYLRIALELHLKRLIVGGLERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M +   I + AA         ++Q    +     +
Sbjct: 258 GMDTRHNPEFTMLESYVAYYDFHDVMDETEGIFKAAAAAVTDDNVVTYQGHTVDLNKPFK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +A   Y  ID    + + D          A +  I          I +    E +
Sbjct: 318 RQHMVDAIKEYTGIDFWQPMSDDD------AKKLADEHHIHYEPWWKTGHIINAFFEELV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P   +   T +  +P   S LA     DPRFT RFELY    E  NA  EL DPI+QR 
Sbjct: 372 QPK--LEQPTFIYGHPVEISPLAKKNHDDPRFTDRFELYILTNEFANAFSELNDPIDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E+K    E   IDED++  L   MP + G+ +G DRLVML+T A +I +VI  
Sbjct: 430 RFEAQVAERKAGNEEAEGIDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVILF 489

Query: 346 PFSQSN 351
           P  +  
Sbjct: 490 PTMRPE 495


>gi|257882590|ref|ZP_05662243.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257886012|ref|ZP_05665665.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257891705|ref|ZP_05671358.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894180|ref|ZP_05673833.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260559536|ref|ZP_05831717.1| lysyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206687|ref|ZP_05921385.1| lysyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565049|ref|ZP_06445503.1| lysyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293553702|ref|ZP_06674326.1| lysyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293563203|ref|ZP_06677659.1| lysyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293570125|ref|ZP_06681205.1| lysyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294614890|ref|ZP_06694781.1| lysyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294623714|ref|ZP_06702547.1| lysyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314938205|ref|ZP_07845505.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314943100|ref|ZP_07849899.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314949297|ref|ZP_07852640.1| lysyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314952230|ref|ZP_07855245.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314992088|ref|ZP_07857538.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314996271|ref|ZP_07861327.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|257818248|gb|EEV45576.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257821868|gb|EEV48998.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257828065|gb|EEV54691.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830559|gb|EEV57166.1| lysyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260074635|gb|EEW62956.1| lysyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079180|gb|EEW66873.1| lysyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289163256|gb|EFD11102.1| lysyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291587497|gb|EFF19381.1| lysyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291592176|gb|EFF23794.1| lysyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291596929|gb|EFF28147.1| lysyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291602277|gb|EFF32505.1| lysyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291604853|gb|EFF34331.1| lysyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313589515|gb|EFR68360.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313593302|gb|EFR72147.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595625|gb|EFR74470.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598159|gb|EFR77004.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313642401|gb|EFS06981.1| lysyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313644303|gb|EFS08883.1| lysyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 498

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 104/364 (28%), Positives = 164/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N +IE+++ 
Sbjct: 147 LRPLPDKYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYLDGNGYIEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDIDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M     IIR AA +V      ++     +  S+ +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +              A++  + V        + +      +
Sbjct: 323 RIHMVDAIKEQTGVDFWQEMT------LEEALALAEKHNVEVTEAMGVGHVINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EET--LTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFTELNDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +E++   +E + +DEDFL  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEAQEKERELGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PTMR 498


>gi|289741863|gb|ADD19679.1| class II lysyl-tRNA synthetase [Glossina morsitans morsitans]
          Length = 566

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 83/373 (22%), Positives = 153/373 (41%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R                R  + S +R++     F+EI++ 
Sbjct: 183 LHMLPHLHFGLKDKETRYRQRYLDLILNNKVRENFHTRAKVISYIRQFLDGMGFLEIETP 242

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 243 MMNMIPGGAT-AKPFITH---HNELNMDLFMRIAPELYHKMLIVGGFDRVYEIGRQFRNE 298

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  +M+    ++       +       +           
Sbjct: 299 GIDMTHNPEFTTCEFYMAYADYHDIMEITEQMVSGMVRAIHGTYKIKYHPEGAEGPVQEI 358

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++         +      +         L        +      T + +  
Sbjct: 359 DFTPPFKRVSMITTLEEKLKVQFPPASEFASAKTNEFLSQLCANHNVECPAPRTTARLLD 418

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  +   P  T+RFEL+    E+CNA  EL 
Sbjct: 419 KLVGEFVEEYC--INPTFICDHPQIMSPLAKYHRGVPGLTERFELFVMKKEICNAYTELN 476

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 477 DPVVQRERFEQQANDKAAGDDEAQLVDENFCTALEYGLPPTGGWGMGIDRLTMFLTDSNN 536

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 537 IKEVLLFPAMKPD 549


>gi|170076670|ref|YP_001733308.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169884339|gb|ACA98052.1| lysyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 538

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 160/365 (43%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +++R Y  +  F+EI++ 
Sbjct: 149 LLPLPDKWHGLTDIEKRYRQRYVDLIINPQVKETFRRRAKITAAIRRYLEDRDFLEIETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+L+  G E++F     +RN 
Sbjct: 209 VLQAEAGGA-EARPFITH---HNTLDMPLYLRIATELHLKRLVVGGFERVFELGRIFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M    ++IR  A ++  Q    +  V  +  +   
Sbjct: 265 GVSTKHNPEFTSIEVYQAYGDYFDMMDLTEDLIRTLAKDIVGQAQLPYGEVIVDVGTPWR 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
             T+         I+  +        D +     A+  G+ +         + +    +K
Sbjct: 325 RETMQNLVQEATGINFLSF------DDLNAAKQAAESVGMHIPEKCKTIGQLLNEAFEQK 378

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  +   P  T+RFEL+    EL N   EL DP++QR
Sbjct: 379 VEAT--LIQPTFVTEYPVEVSPLAKPHRDKPGLTERFELFIVGRELANGFSELTDPVDQR 436

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E++  +K     E   +DEDF+  L   MP + G+ +G DRLVML+T A +I +VI 
Sbjct: 437 QRLEEQAAKKAAGDEEACDVDEDFVTALEYGMPPTVGLGIGIDRLVMLLTNAESIRDVIA 496

Query: 345 TPFSQ 349
            P  +
Sbjct: 497 FPLLK 501


>gi|301308639|ref|ZP_07214591.1| lysine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300833163|gb|EFK63781.1| lysine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 576

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 91/374 (24%), Positives = 153/374 (40%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  I  ++R    E  
Sbjct: 142 LRPLPVVKYKDGVAYDGFNDPELRYRQRYVDLVVNEGVKDIFMKRAAIIKTMRTALDEAG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ   G  +  R F+T     + +   LYL+ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPILQSIAGGAS-ARPFTTH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNC 159
              +RN      H PEFT +E Y  ++ Y  +M     ++       N     +      
Sbjct: 258 GKNFRNEGMDRTHNPEFTCMELYVQYKDYNWMMSFTEKLLERICIAVNGTSESTIDGKTI 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    + + EA       D        +      +    ++  + +        +  
Sbjct: 318 SFKAPFRRLPILEAIKEKTGYD-------LEGKSEDEIRTICKELKMEIDDTMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 371 EIFGEFCEGT--FIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++++  +K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 429 DPIDQEERFKEQLRLSEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTT 488

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 489 IQEVLLFPQMRPEK 502


>gi|30250282|ref|NP_842352.1| lysS; putative lysyl-tRNA synthetase protein [Nitrosomonas europaea
           ATCC 19718]
 gi|39932150|sp|Q82SH1|SYK_NITEU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|30181077|emb|CAD86267.1| lysS; putative lysyl-tRNA synthetase protein [Nitrosomonas europaea
           ATCC 19718]
          Length = 502

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 163/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YRRR                R+ I  ++RE+ V+  ++E+++ 
Sbjct: 147 LRPLPEKFHGLADQEQKYRRRYLDLITNEDTRRVFAIRSKIIQAIREFLVDRDYLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   LYL+ +PE   K+L+  G EK+F     +RN 
Sbjct: 207 MMHSIPGGAT-ARPFVTH---HNALDMSLYLRIAPELYLKRLVVGGMEKVFEINRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A++ +  LM    +++R  A          +Q    +      
Sbjct: 263 GISTRHNPEFTMLEFYEAYQDHNYLMDLTESMLREVALKVSGTTRIVYQQREMDLAQPFA 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+A+A  +Y          +    DR  L    Q  G+ V  D     +   +  E  
Sbjct: 323 RLTIAQAILKY-----HPEYSDAQLNDRDFLTKALQAKGVTVNPDSGIGGLQLALFDETT 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  YPA  S LA    A+P  T RFELY    E+ N   EL DP +Q +
Sbjct: 378 E--HLLFEPVFIVDYPAEVSPLARCNDANPEITDRFELYIAGREIANGFSELNDPEDQAN 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ + K+    E    D D++  L   +P ++G  +G DRLVML+T + +I +VI  
Sbjct: 436 RFLEQARAKEAGDLEAMHYDADYIQALEYGLPPTAGEGIGIDRLVMLLTDSPSIRDVILF 495

Query: 346 PFSQSN 351
           P  +  
Sbjct: 496 PQLRKE 501


>gi|293390165|ref|ZP_06634499.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290950699|gb|EFE00818.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 502

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 167/364 (45%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + + +REYF+   F+E+++ 
Sbjct: 146 LRPLPDKFHGLTDQEVRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFLSKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-ARPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM +   ++R  A ++    I  + ++  +     E
Sbjct: 262 GVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+  A  +Y +      +   D  D       A++ GI V        I + I  E  
Sbjct: 322 RITLHNAIIKYGS---EKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 379 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQND 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  
Sbjct: 437 RFDAQVAAKEAGDDEAMFKDEDFVIALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILF 496

Query: 346 PFSQ 349
           P  +
Sbjct: 497 PAMR 500


>gi|119470491|ref|ZP_01613194.1| lysyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446192|gb|EAW27469.1| lysyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 511

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 90/378 (23%), Positives = 161/378 (42%), Gaps = 30/378 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ +   +R +  +  F+E+++ 
Sbjct: 139 LRPLPEKFHGLSDQETKYRQRYVDLITNEATRETFRIRSQVVEGIRRFLADRDFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 199 MLQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------- 157
                H PEFTM+E+Y+A+  Y  LM    +++R  A                       
Sbjct: 255 GLSTRHNPEFTMIEFYQAYADYIDLMNITEDMLRTVATNVLGSPIVVNTTKDENGEVIDS 314

Query: 158 -NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              +     E +++A+A  +Y N +    + N  +     L   A+Q  +++  +  W  
Sbjct: 315 VEYDFGKPFERLSMADAILKY-NPEFDAAVFNDPENHFEELKAYAKQVHVKIPENCVWGP 373

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
                 I +      +   T +  YP   S LA     +   T RFE +    EL N   
Sbjct: 374 GKFLCEIFEETAEHMLIQPTFITGYPWEVSPLARRNDDNAFVTDRFEFFVGGRELANGFS 433

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL D  +Q  RF ++++EK    +E    DED++  L   +P ++G  +G DRLVML T 
Sbjct: 434 ELNDAQDQAERFTRQVEEKDAGDDEAMHYDEDYIRALEYGLPPTAGEGIGIDRLVMLFTD 493

Query: 336 ANNINEVIWTPFSQSNQE 353
           ++ I +VI  P  +   +
Sbjct: 494 SSTIKDVILFPHMRPQAD 511


>gi|146328872|ref|YP_001209830.1| lysyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|229559857|sp|A5EY50|SYK_DICNV RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146232342|gb|ABQ13320.1| lysyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 498

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 158/365 (43%), Gaps = 25/365 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R +F    F+E+++ 
Sbjct: 145 LRPLPDKFHGLTDQEIRYRQRYVDLMVNAQSRDVFKARSKIISYIRHFFEARDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +  PLYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 205 MMHPIPGGAA-AKPFITH---HNALDMPLYLRIAPELYLKRLVVGGFERVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE+Y+A+  Y  LM     + +  A+                FS+   
Sbjct: 261 GVSARHNPEFTMLEFYQAYADYNDLMDLSEVLFQGLAQTILGTTKFDYQGTEIDFSQFRR 320

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + +A  +Y          N  +    ++ L  ++  I   ++     + + I  E +E
Sbjct: 321 LPMRDAVCQYV-----PEAANILEDAPKMVQLLKEKFHIDAGNESDCGKLMTMIFEEGVE 375

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YPA  S L+     +P  T RFEL+    E+ N   EL D  +Q  R
Sbjct: 376 --HLLIQPTFVIEYPAVVSPLSRRNDENPDITDRFELFIGGREIANGFSELNDAEDQAER 433

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+++    +    E    D DF+  L   +P ++G  +G DRLVML+T A +I +V+  P
Sbjct: 434 FKEQAAAFEAGDEEAMHYDGDFVRALEYGLPPTAGQGIGIDRLVMLLTNAPSIRDVLLFP 493

Query: 347 FSQSN 351
             +  
Sbjct: 494 HMRPE 498


>gi|53802401|ref|YP_112835.1| lysyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|53756162|gb|AAU90453.1| lysyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 496

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ I   +R++  E  FIE ++ 
Sbjct: 141 LRPLPEKFHGLTDAETRYRQRYLDLLMNEESRRVFQLRSAIVRYIRDFLSERGFIEAETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     + F T     + +   LYL+ +PE   K+L+  G EK+F    ++RN 
Sbjct: 201 MMQVIPGGAR-AKPFVTH---HNALGLDLYLRIAPELYLKRLVVGGFEKVFEINRSFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM     ++R  A+ +    + + Q  + +      
Sbjct: 257 GLSTRHNPEFTMIEFYQAYADYRDLMDLTETLMRGIAQNLLGGTVVTHQGKDYDLGRPFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV E+   Y        +   D  +R      A   GI VA  D    I + I  + +
Sbjct: 317 RMTVLESIIHY-----NPDIRAEDLAERESAAAIAAGLGIPVAAGDGLGKIQTEIFEKTV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    ++  T +  YPA  S LA     +P  T RFE +    EL N   EL DP +Q  
Sbjct: 372 EDR--LDEPTFITAYPAEVSPLARRNDENPFITDRFEFFVGGRELANGFSELNDPEDQAE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K++++K     E    D D++  L   +P ++G  +G DRLVM  T + +I +VI  
Sbjct: 430 RFRKQVEDKAAGDEEAMHYDADYIRALEYGLPPTAGEGIGIDRLVMFFTDSPSIRDVILF 489

Query: 346 PFSQSN 351
           P  +  
Sbjct: 490 PHMRPE 495


>gi|332967664|gb|EGK06775.1| lysine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 504

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRD-------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +PS+     D              +   R   +KR+ I  S+R + V  Q++E+++ 
Sbjct: 150 LRPLPSKFHGLSDQETKYRQRYVDLIANPDSRDTFIKRSQIVQSIRNFMVNEQYLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMHPIPGGAT-AKPFVTH---HNALDMPLYLRIAPELYLKRLVVGGLERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   YE++M+    +IR A+   N     ++     +  S  E
Sbjct: 266 GMSVRHNPEFTMMEFYEAFCDYERMMEMTEGVIRAASHAVNGTAKITYNGKEVDLESPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  ++          +    D   L  +  + G  + H      +   +     
Sbjct: 326 RLTILQAIKKF-----NPQYTDEQLHDAEWLKKEIVKHGESLPHASGLGSLQLALFEGCT 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  
Sbjct: 381 ESK--LWNPTFIIDYPVEVSPLARASDTKSDLTERFELFVVGRELANGYSELNDPEDQAA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T A  I +V+  
Sbjct: 439 RFKSQVAQKDAGDDEAMHFDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDAQTIRDVVLF 498

Query: 346 PFSQSN 351
           P  +  
Sbjct: 499 PQMRPE 504


>gi|329769858|ref|ZP_08261257.1| lysyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328837912|gb|EGF87536.1| lysyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 500

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 157/366 (42%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR              + R+ I   +R Y  E  ++E+++ 
Sbjct: 147 LRPLPDKFHGLKDVEERYRRRYVDLIMNEDSKETFILRSKIIQIMRSYLNERGYLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   L+++ + E   K+L+  G EK++    A+RN 
Sbjct: 207 MMHTIAGGAA-ARPFVTH---HNALDMELFMRIALELPLKRLIVGGLEKVYEIGRAFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    ++I      +       +     +   +  
Sbjct: 263 GVSTRHNPEFTMIELYEAYADYNDIMDLTESMIAYICNEIHGTTKIMYGEDEIDLTPKWA 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    + +         +  A++  + V  D     I +      +
Sbjct: 323 RIHMVDAIKDVTGVDFWQEMTD------EQAHALAKEHNVPVRKDMKVGHIINEFFEVFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 377 EET--LVQPTFIYGHPVEVSPLAKTNAEDKRFTDRFELFIVRREHANAFSELNDPIDQKE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +M EK     E Y +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 435 RFLAQMDEKDAGNEEVYEMDEDFVEALEYGMPPTGGLGIGIDRLVMLLTNSASIRDVLLF 494

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 495 PYMKHK 500


>gi|255016153|ref|ZP_05288279.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 560

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 91/374 (24%), Positives = 153/374 (40%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  I  ++R    E  
Sbjct: 126 LRPLPVVKYKDGVAYDGFNDPELRYRQRYVDLVVNEGVKDIFMKRAAIIKTMRTALDEAG 185

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ   G  +  R F+T     + +   LYL+ + E   K+L+  G E ++  
Sbjct: 186 YTEVETPILQSIAGGAS-ARPFTTH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEI 241

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNC 159
              +RN      H PEFT +E Y  ++ Y  +M     ++       N     +      
Sbjct: 242 GKNFRNEGMDRTHNPEFTCMELYVQYKDYNWMMSFTEKLLERICIAVNGTSESTIDGKTI 301

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    + + EA       D        +      +    ++  + +        +  
Sbjct: 302 SFKAPFRRLPILEAIKEKTGYD-------LEGKSEDEIRTICKELKMEIDDTMGKGKLID 354

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 355 EIFGEFCEGT--FIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 412

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++++  +K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 413 DPIDQEERFKEQLRLSEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTT 472

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 473 IQEVLLFPQMRPEK 486


>gi|86149179|ref|ZP_01067411.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85840537|gb|EAQ57794.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 501

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 158/368 (42%), Gaps = 27/368 (7%)

Query: 3   QIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R              L R+ + S +R +F    F+E+++  +
Sbjct: 142 PLPEKYHGLTDIEQRYRKRYVDMIMNVEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMM 201

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN   
Sbjct: 202 HPIAGGA-NAKPFVT---FHNSLGIERFLRIAPELYLKRLIVGGFEAVFEINRCFRNEGM 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A+ +Y+ LM     +     +  N  K   F     N     E I
Sbjct: 258 DLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLDKLNLGKTIEFDGKMINFSKPFERI 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T  +A  +Y  +D           D+  +  + +  G           + + +    +E 
Sbjct: 318 TYKDALCKYGGLDRD------LIEDKEKILTKLKADGFEANEKLELGHLQAELFDNYVEE 371

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L+     D +  +RFEL+ C  EL N  +EL DP++Q  RF
Sbjct: 372 K--LINPTFVIDFPISISPLSRRSDEDSQIAERFELFICGRELANGFNELNDPLDQYERF 429

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+++ K     E   +DEDF+  L   MP ++G  +G DRLVML+T   +I +VI  P 
Sbjct: 430 LKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPA 489

Query: 348 SQSNQEEI 355
            +  + E+
Sbjct: 490 MRPLKSEL 497


>gi|117924339|ref|YP_864956.1| lysyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|226737093|sp|A0L6F7|SYK_MAGSM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|117608095|gb|ABK43550.1| lysyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 501

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 160/366 (43%), Gaps = 28/366 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R                R+ + S +R++     F+E+++  
Sbjct: 147 RPLPEKFHGLEDVETRYRQRYVDLIVNTEVREIFKTRSRVISRIRQFMEHRGFLEVETPM 206

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +   PG  T  R F T     + +   LYL+ +PE   K+L+  G E++F     +RN  
Sbjct: 207 MHPIPGGAT-ARPFVTH---HNALDTDLYLRIAPELYLKRLIVGGFERVFEINRNFRNEG 262

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS--FQNVNCNPFSEPE 166
               H PEFTM+E+Y+A+  Y +LM     +++   +  N+   +  +Q    +      
Sbjct: 263 LSPRHNPEFTMMEFYQAYTDYRELMDFTEALVQDVVKDVNEGELTVAYQGQELDFSGPWA 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T AEA  RY   D           +R  L   A+  GI+         +   I  E +
Sbjct: 323 RLTPAEAIVRYMEADAARI------TERGYLESLAESLGIKAETSWDDGMLLLTIFEEGV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     +P   +RFEL+    E+ NA  EL DP +Q  
Sbjct: 377 EHK--LMAPTFIIDYPISVSPLSRRSDDNPDIAERFELFIAGREIANAFSELNDPADQAS 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+K+++ K     E    D D++  L   MP + G  +G DRLVML+T A NI EV+  
Sbjct: 435 RFQKQVEAKDAGNEEAMHFDADYIRALEYGMPPTGGEGIGIDRLVMLLTDAANIREVLLF 494

Query: 346 PFSQSN 351
           P  +  
Sbjct: 495 PQMKRE 500


>gi|149374725|ref|ZP_01892499.1| Lysyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149361428|gb|EDM49878.1| Lysyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 510

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 96/378 (25%), Positives = 156/378 (41%), Gaps = 35/378 (9%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D   R              R     R+ I S +R+YF +  F+E+++ 
Sbjct: 137 LRPLPEKHKGLTDTEARYRHRYVDLMVNEDSRRVFYARSKIISVMRQYFTDRDFMEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 197 MLQVIPGGAT-ARPFVTH---HNALGIDMYLRIAPELFLKRLVVGGFERVFEINRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF----------SFQNV 157
                H PEFTM+E+Y+A+  Y  LM    +++R  A+                   + +
Sbjct: 253 GLSTRHNPEFTMVEFYQAYADYNDLMDLTEDMLRTIAQKVLGTTTVVNTRTLSDGEEETI 312

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +     E +TV +A  RY        +      D       A+  GI +        +
Sbjct: 313 EYDFGKPFERLTVVDAILRY-----NPDIKAEQLADEASARQVAKDLGIHLKEGWGLGKV 367

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I     E    +   T +  YP   S LA     D   T+RFE +    E+ N   E
Sbjct: 368 QIEIFEATAEHR--LMQPTFITDYPKEVSPLARCKDNDTFVTERFEFFVGGREIANGFSE 425

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L D  +Q  RF+ ++ EK    +E    DED++  L   +P ++G  +G DRL ML+T +
Sbjct: 426 LNDAEDQAERFQDQVAEKDAGDDEAMFYDEDYVMALEYGLPPTAGEGIGIDRLAMLLTDS 485

Query: 337 NNINEVIWTPFSQSNQEE 354
            +I +VI  P  +   + 
Sbjct: 486 ASIRDVILFPAMRPEHKA 503


>gi|332376007|gb|AEE63144.1| unknown [Dendroctonus ponderosae]
          Length = 590

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 87/373 (23%), Positives = 157/373 (42%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R                R  I + +R++F E  F+EI++ 
Sbjct: 205 LHMLPHLYYGLKDKETRFRQRYLDLILNNNIRFIFQTRAKIIAYIRKFFDEQGFLEIETP 264

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 265 MMNMIAGGAT-AKPFVTH---HNDLNMDLFMRIAPELYHKMLVVGGFDRVYEIGKQFRNE 320

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y+ L+    +++       +       +           
Sbjct: 321 GIDLTHNPEFTTCEFYMAYADYQDLIAITESLLSTMVYHIHGTHKVKYHPDGPEGEEYEI 380

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I +  A     N+      +         L     +  +  A   T + +  
Sbjct: 381 DFTPPFKRIPMVPALEAALNVKFPPATEFYSPTTTKFLDDLCIKHNVDCAPPRTTARLLD 440

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 441 KLVGEFIEEKC--INPTFIMEHPQIMSPLAKWHRSIPGLTERFELFVMKKEICNAYTELN 498

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP  QR RFE++  +K    +E   +DE+F   L   +P + G  +G DRL M +T  NN
Sbjct: 499 DPAVQRQRFEQQAADKAAGDDEAQLVDENFCTALEYGLPPTGGWGLGIDRLTMFLTDNNN 558

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 559 IKEVLLFPAMKPD 571


>gi|78211662|ref|YP_380441.1| lysyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|123770824|sp|Q3ANE6|SYK_SYNSC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78196121|gb|ABB33886.1| lysyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 502

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 150/367 (40%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  + S +R +  +  F+EI++ 
Sbjct: 138 LQPLPDKWHGLADVEKRYRQRYLDLVVSPDSRETFRRRARLVSGIRRWLDQRDFLEIETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +  PL L+ + E   K+L+  G E+++     +RN 
Sbjct: 198 VLQSEPGGA-DARPFETH---HNALDLPLTLRIATELHLKRLVVGGFERVYELGRIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M+    ++     EV      ++Q    +      
Sbjct: 254 GVSTRHNPEFTSVEIYQAYSDYVGMMELTEQMVSAVCEEVCGTTTITYQGTEIDLAPPWR 313

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEK 225
             T+ E       +D            R          G+      D+   + +    + 
Sbjct: 314 RATMHELVQDATGLDFNGFSS------REEAAAAMTAKGLHAPELADSVGRLLNEAFEQA 367

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL DP++QR
Sbjct: 368 VETT--LIQPTFVTDYPVEISPLARPHRSKPGLVERFELFIVGREHANAFSELTDPVDQR 425

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   K     E   +DEDF+  L   MP + G+ +G DRLVML+T   +I +VI 
Sbjct: 426 QRLEAQQARKAAGDLEAQGLDEDFVMALEVGMPPTGGLGIGIDRLVMLLTDCPSIRDVIA 485

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 486 FPLLRPE 492


>gi|317495481|ref|ZP_07953849.1| lysyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914295|gb|EFV35773.1| lysyl-tRNA synthetase [Gemella moribillum M424]
          Length = 499

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR              + R+ I   +R Y  +  ++E+++ 
Sbjct: 146 LRPLPDKFHGLKDVEERYRRRYVDLIMNEESKETFIMRSKIIQIMRSYLNDRGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   L+++ + E   K+L+  G EK++    A+RN 
Sbjct: 206 MMHSVAGGAA-ARPFVTH---HNALDMQLFMRIALELPLKRLIVGGLEKVYEIGRAFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  +  +M    ++I      +       +     +   +  
Sbjct: 262 GVSTRHNPEFTMIELYEAYADFNDIMDLTESMIAYICNEIHGTTKIMYGEDEIDLTPKWR 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    + +         +  A++  + V  D     I +      +
Sbjct: 322 RIHMVDAIKEVTGVDFWKEMTD------EEAHTLAKEHNVPVRKDMKVGHIINEFFETFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 376 EET--LVQPTFVYGHPVEVSPLAKTNPEDTRFTDRFELFIVRREHANAFSELNDPIDQKE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +M EK     E Y +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  
Sbjct: 434 RFLAQMDEKDAGNEEVYEMDEDFVESLEYGMPPTGGLGIGIDRLVMLLTNSASIRDVLLF 493

Query: 346 PFSQSN 351
           P+ +  
Sbjct: 494 PYMKHK 499


>gi|156973279|ref|YP_001444186.1| lysyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166230600|sp|A7MXL2|SYK_VIBHB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|156524873|gb|ABU69959.1| hypothetical protein VIBHAR_00960 [Vibrio harveyi ATCC BAA-1116]
          Length = 510

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 166/367 (45%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVVRSKVMSAIRNFMITKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y++LM     ++   A EV       + +          
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADYKELMDLTEELLSSVALEVLGSTSMPYGDDTVEFGGTYT 324

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y  +      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 325 RMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIAKSVHVEVESFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  + I +VI 
Sbjct: 443 ARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVIL 502

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 503 FPAMRPQ 509


>gi|73956988|ref|XP_536777.2| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 1 [Canis familiaris]
          Length = 597

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 210 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 269

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 270 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKILVVGGIDRVYEIGRQFRNE 325

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +           
Sbjct: 326 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYHPDGPEGEAYEI 385

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 386 DFTPPFRRISMVEELEKALGVKLPETKLFETEETRKILDDICLARAVECPPPRTTARLLD 445

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 446 KLVGEFLETTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 503

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 504 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNN 563

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 564 IKEVLLFPAMKPEDKK 579


>gi|253997053|ref|YP_003049117.1| lysyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253983732|gb|ACT48590.1| lysyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 516

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 160/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +ENQF+E+++ 
Sbjct: 161 LRPLPEKFHGLQDQEVKYRQRYVDLMVSEETRATFMARSKVVSAIRSFMLENQFLEVETP 220

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  +  + F T     + +   +Y++ +PE   K+L+  G E++F     +RN 
Sbjct: 221 MLHPIPGGAS-AKPFITH---HNALDMQMYMRIAPELYLKRLVVGGFERVFEVNRNFRNE 276

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM      IR AA       +  +Q    +     +
Sbjct: 277 GLSVRHNPEFTMMEFYAAYTDYLWLMDFTERCIRAAAIAATGSAVLQYQGRELDLSKPFQ 336

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+  A  +YA              D + L  +  + G +         +   +  E  
Sbjct: 337 RLTIVGAIQKYA-----PQYTLEQLNDANFLRAEILKFGTKPFDHAGLGALQLALFEETA 391

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T+RFEL+    E+ N   EL D  +Q  
Sbjct: 392 ESQ--LWEPTYIIDYPVEVSPLARASDKNPEITERFELFVTGREIANGFSELNDAEDQAA 449

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +M+ K+    E    D DF+  L   MP + G  +G DRLVM++T + +I +VI  
Sbjct: 450 RFHAQMKAKEAGDAEAMYYDADFIRALEYGMPPTGGCGIGIDRLVMMITDSPSIRDVILF 509

Query: 346 PFSQSN 351
           P  +  
Sbjct: 510 PHMRPE 515


>gi|91794476|ref|YP_564127.1| lysyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060626|sp|Q12JH2|SYK_SHEDO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|91716478|gb|ABE56404.1| lysyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 500

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 88/367 (23%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + ++ +F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQETRYRQRYVDLIVNEESRNAFIMRSKVVSAIRNFMIKKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHVIPGGAS-ARPFVTH---HNALDMAMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A ++       +     +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYQDLMDLTEEMLSSIAIDLLGSAQMPYGEHTVDFGGPYA 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA  +Y   +     +      D   +   A   GI++    T   +   I  E 
Sbjct: 315 RLSMLEAIQKYNPENATIQAMTYEQVKDVEFMRDLASSLGIKLEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPK--LMQPTFITGYPADISPLARRNDNNDFITDRFEFFIGGREVANGFSELNDAQDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 NRFKAQVNAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|183221280|ref|YP_001839276.1| lysyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911371|ref|YP_001962926.1| lysyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776047|gb|ABZ94348.1| Lysine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167779702|gb|ABZ98000.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase; LysRS) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 497

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 85/373 (22%), Positives = 160/373 (42%), Gaps = 34/373 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR R                R+ I S +R++     
Sbjct: 137 IRPLPVVKEKDGVIYDAFSDVEQRYRMRYVDLVVNENVRETFKMRSRIISEIRKFLTNEG 196

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           F+E+++  +Q   G     R F T     + +   L+L+ +PE   K+L+  G +++F  
Sbjct: 197 FLEVETPMMQPIAGGAA-ARPFVTH---HNTLDMELFLRIAPELYLKRLIVGGMDRVFEL 252

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNC 159
              +RN      H PEFTM+E Y A    E ++     +I   A        F +     
Sbjct: 253 NRNFRNEGISTKHNPEFTMMEAYMAFGDMEAMLSLTERMIVSVATAIGKGLKFPYGKDQI 312

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +   +    Y+ ID           D      +A+  G+  +   +   +  
Sbjct: 313 DLTPPWKRVKYIDIIKDYSGIDFSQI------TDVKEAIEKAKAKGVDSSDSVSIWKVCD 366

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            +    +EP+  +     +  +P   S LA     DP++ +RFE Y    E+ NA  EL 
Sbjct: 367 DVFSSLVEPH--LIQPIFITDFPKELSPLAKSREDDPKYVERFEPYVAGREIGNAFTELN 424

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE+++++++   +E + +D+D++  L   +P + G+ +G DRLVML+T +++
Sbjct: 425 DPFDQRERFEEQVKQREAGDDEAFMMDDDYIRALEYGLPPTGGLGIGIDRLVMLLTDSHS 484

Query: 339 INEVIWTPFSQSN 351
           I + I  P  +  
Sbjct: 485 IRDTILFPLMRPE 497


>gi|145637999|ref|ZP_01793635.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145268809|gb|EDK08776.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 503

 Score =  333 bits (854), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 99/364 (27%), Positives = 168/364 (46%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     D    YR+R              + R+ + + +RE+F+   F+E+++ 
Sbjct: 147 LRPLPNKFHGLTDMEARYRQRYLDLISNEESRRTFIIRSKVVAGIREFFISKGFMEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 207 MLQVIPGGAS-ARPFITH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+++  Y  LM +   ++R  A ++    I  + ++  +     E
Sbjct: 263 GVSVRHNPEFTMLEYYQSYADYHDLMDNTEELLRKLAIDILGTTIVKYGDLEFDFGKPFE 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y        +   D  D       A++ GI V        I + I  E  
Sbjct: 323 RITLHDATIKYG---ADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 380 EHH--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQNE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+   +E    D+DF+  L   +P ++G  +G DRL ML   A++I +VI  
Sbjct: 438 RFDAQVAAKEAGDDEAMFKDDDFVVALEHGLPPTAGEGLGIDRLAMLYANASSIRDVILF 497

Query: 346 PFSQ 349
           P  +
Sbjct: 498 PAMR 501


>gi|313895695|ref|ZP_07829251.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975821|gb|EFR41280.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 503

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 152/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR  I  S+R Y  E  F+E+++ 
Sbjct: 149 LRPLPEKFHGLKDVDTRYRQRYLDLMVNYEVRDTFRKRAKIIRSIRSYLDERDFLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E S K+L+  G ++++     +RN 
Sbjct: 209 VLSTIAGGAA-ARPFITH---HNALDIDLYLRIATELSLKRLIVGGLDRVYEMGRIFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A   Y  LM+    I+R  AE                      
Sbjct: 265 GMDVRHNPEFTSIEIYQAFGDYRDLMEITEGIVRRTAEDVLGTTKITYQGVEIDLGTVRT 324

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +++ +A       D  +                A++ G+          I +    EK+E
Sbjct: 325 VSMNDAVCEATGRDFLSC------TTVDEARAMAKEIGVPFEERHGIGGILNAAFEEKVE 378

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA   P DPR T RFE +    EL N   EL DPI+Q  R
Sbjct: 379 ET--LIQPTFITGHPTEISPLAKRNPDDPRITDRFEFFVYGRELANGFTELNDPIDQEQR 436

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++ +++    E + +D D++  L   +P + G+ +G DRLVML+T + +I +V+  P
Sbjct: 437 FIDQLAQREAGDAEAHVMDRDYVTALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 496

Query: 347 FSQS 350
             + 
Sbjct: 497 TMKP 500


>gi|304569719|ref|YP_011589.2| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
          Length = 514

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 160/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR +I    R +     F+E+++ 
Sbjct: 159 IRPLPEKYHGLKDVEIRYRQRYVDLIVTPRARDIFRKRTIIVREFRRFLEARGFMEVETP 218

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   LY++ +PE   K+LL  G EK+F     +RN 
Sbjct: 219 MMQAIPGGAT-AKPFVT---FHNALDMQLYMRIAPELYLKRLLVGGFEKVFEINRNFRNE 274

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--P 165
                H PEFTM E+Y A+ ++E LM     +    A                  +    
Sbjct: 275 GISTQHNPEFTMCEFYWAYATFEDLMDLTEELFSHIAREVCGSSVITYQGQEVDLTPGKW 334

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +T  E+  +                D   +    ++ G +V   +    + +++    
Sbjct: 335 VRLTFHESLEKVGG------HSPEFYNDYEKVRAYVRERGEKVLQGEKLGKLQAKLFDLD 388

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP   S L+     +P  T RFEL+    EL NA  EL DP++QR
Sbjct: 389 VEPR--LIQPTFIYHYPTDISPLSRRNEQNPDVTDRFELFITGRELANAFSELNDPVDQR 446

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +++EK+   +E + +DED+L  L   MP ++G  +G DRLVML+T + +I EVI 
Sbjct: 447 MRFEDQVKEKEAGDDEAHFMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSPSIREVIL 506

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 507 FPLLKPE 513


>gi|262384430|ref|ZP_06077565.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262294133|gb|EEY82066.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 576

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 91/374 (24%), Positives = 151/374 (40%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  I  ++R    E  
Sbjct: 142 LRPLPVVKYKDGVAYDGFNDPELRYRQRYVDLVVNEGVKDIFMKRAAIIKTMRTALDEAG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ   G  +  R F T     + +   LYL+ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPILQSIAGGAS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNC 159
              +RN      H PEFT +E Y  ++ Y  +M     ++       N     +      
Sbjct: 258 GKNFRNEGMDRTHNPEFTCMELYVQYKDYNWMMSFTEKLLERICIAVNGTSESTIDGKTI 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    + + EA       D        +      +    +   + +        +  
Sbjct: 318 SFKAPFRRLPILEAIKEKTGYD-------LEGKSEDEIRTICKALKMEIDDTMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 371 EIFGEFCEGT--FIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++++  +K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 429 DPIDQEERFKEQLRLSEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTT 488

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 489 IQEVLLFPQMRPEK 502


>gi|225849439|ref|YP_002729604.1| lysyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643541|gb|ACN98591.1| lysyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 577

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 153/366 (41%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD-------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    RD              + R R     R+    SLRE+     FIE+++ 
Sbjct: 222 LRPLPEKWHGLRDVEERYRYRFLDLIANQRSREIFKLRSKAIKSLREFLESKGFIEVETP 281

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         + F T     + +   LYL+ +PE   K L+  G  ++F     +RN 
Sbjct: 282 ILQPVASGA-LAKPFIT---YHNALDMNLYLRIAPELYLKMLVVGGFNRVFEIGRNFRNE 337

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     + R    +        +++   +      
Sbjct: 338 GIDTTHNPEFTMVEFYAAYLDYNDLMALTEELFRKILLDTVGTLKIKWEDQEIDFEKPFR 397

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +   EA  +    D    L      D       A++ GI  A   T   I  ++    +
Sbjct: 398 RLPFFEALKQKTGKDKEFFL------DYEKAKNFAKEVGIPKADTLTHMKILDKLFEHFV 451

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA  +  DP   +RFEL     EL NA  EL DP +QR 
Sbjct: 452 EE--DLVQPTFVIDFPKILSPLAKTHRNDPDLVERFELIINKQELANAYTELNDPFDQRE 509

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++EK+    E   +DE FL  L   +P ++G  +G DRLVM++T + +I EVI  
Sbjct: 510 RFIQQIREKEMGDEEAMDVDETFLTALEYGLPPTAGEGIGIDRLVMMLTDSVSIREVILF 569

Query: 346 PFSQSN 351
           P  +  
Sbjct: 570 PTLRPE 575


>gi|260771152|ref|ZP_05880079.1| lysyl-tRNA synthetase (class II) [Vibrio furnissii CIP 102972]
 gi|260613749|gb|EEX38941.1| lysyl-tRNA synthetase (class II) [Vibrio furnissii CIP 102972]
 gi|315179242|gb|ADT86156.1| lysyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 510

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 87/367 (23%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + +++R +     ++E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRKAFIIRSKLVAAIRNFMSSKGYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++   A  V       + +       +  
Sbjct: 265 GLSPRHNPEFTMMEFYQAYADYKDLMDLTEEMLSTVAMNVLGSTSMPYGDEMVEFGGQYA 324

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y  +      LD     DR  +   A+   + V    T   +   I  E 
Sbjct: 325 RMSMLDAIKHYNPDHAEIQALDYDKVQDREHMVAIAKSVHVEVEPFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA      P  T RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LIQPTFITGYPADISPLARRNDDFPFITDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++ K    +E    D D++  L   +P ++G  +G DRL ML T ++ I +VI 
Sbjct: 443 ARFKAQVEAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLAMLFTNSHTIRDVIL 502

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 503 FPAMRPQ 509


>gi|90413185|ref|ZP_01221181.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325876|gb|EAS42328.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 502

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 159/370 (42%), Gaps = 22/370 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R             ++ R+ + S++R +  +  F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRNTMIMRSKVVSAIRNFMTKKDFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     ++   A ++       + +   +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIATDLHGSPKLPYGDAIVDFGGPYP 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++  A  +Y   +     L      DR L+   A+   I V    T   +   I  E 
Sbjct: 315 RISMLNAIKQYNPDNAEIQALTYEKVADRELMANIARGLDIYVEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPQ--LMQPTFITEYPADISPLARRNDTNDFITDRFEFFIGGREVANGFSELNDAQDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 QRFKAQVNAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSNQEE 354
            P  +   + 
Sbjct: 493 FPALRPQNKA 502


>gi|149411872|ref|XP_001508683.1| PREDICTED: similar to lysyl-tRNA synthetase [Ornithorhynchus
           anatinus]
          Length = 601

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R+ I + LR +  E  F+EI++ 
Sbjct: 214 LHMLPHLHFGLKDKETRFRQRYLDLILNDFVRQKFITRSKIITYLRSFLDELGFLEIETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 274 MMNVIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 330 GIDLTHNPEFTTCEFYMAYADYNDLMEITEKMLSGMVKHIRGSYKIAYHPDGPEGQAFEI 389

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L       GI      T + +  
Sbjct: 390 DFTPPFRRISMVEELEKALGVKLPATNLFETEETRKILDDICVAKGIECPAPRTTARLLD 449

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 450 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKAGLTERFELFVMKKEVCNAYTELN 507

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE + + K    +E   ID++F   L   +P ++G  MG DRL M +T +NN
Sbjct: 508 DPVRQRQLFEDQAKAKAAGDDEAMFIDDNFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 567

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 568 IKEVLLFPAMKPEDKK 583


>gi|88597300|ref|ZP_01100535.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|121612659|ref|YP_001000112.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005070|ref|ZP_02270828.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|205355949|ref|ZP_03222717.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|218562059|ref|YP_002343838.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|8928543|sp|P41258|SYK_CAMJE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229804|sp|A1VYC1|SYK_CAMJJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|87250122|gb|EAQ73080.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|88190361|gb|EAQ94335.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359765|emb|CAL34551.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|205346073|gb|EDZ32708.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|284925672|gb|ADC28024.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315926687|gb|EFV06066.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315929054|gb|EFV08292.1| Lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 501

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 158/368 (42%), Gaps = 27/368 (7%)

Query: 3   QIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R              L R+ + S +R +F    F+E+++  +
Sbjct: 142 PLPEKYHGLTDIEQRYRKRYVDMIMNVEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMM 201

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN   
Sbjct: 202 HPIAGGA-NAKPFVT---FHNSLGVERFLRIAPELYLKRLIVGGFEAVFEINRCFRNEGM 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A+ +Y+ LM     +     +  N  K   F     N     E I
Sbjct: 258 DLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLDKLNLGKTIEFDGKMINFSKPFERI 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T  +A  +Y  +D           D+  +  + +  G           + + +    +E 
Sbjct: 318 TYKDALCKYGGLDRD------LIEDKEKILTKLKADGFEANEKLELGHLQAELFDNYVEE 371

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L+     D +  +RFEL+ C  EL N  +EL DP++Q  RF
Sbjct: 372 K--LINPTFVIDFPISISPLSRRSDEDSQIAERFELFICGRELANGFNELNDPLDQYERF 429

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+++ K     E   +DEDF+  L   MP ++G  +G DRLVML+T   +I +VI  P 
Sbjct: 430 LKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPA 489

Query: 348 SQSNQEEI 355
            +  + E+
Sbjct: 490 MRPLKSEL 497


>gi|317486635|ref|ZP_07945452.1| lysyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316922018|gb|EFV43287.1| lysyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 527

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 156/366 (42%), Gaps = 28/366 (7%)

Query: 2   HQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +       +  YR+R               KR+ I  + R +  E  F+E+++  
Sbjct: 173 RSLPEKHKGLTNVEIRYRQRYVDLITNPKVRDIFRKRSKIIRTFRAFLEERGFVEVETPM 232

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L    G     R F T     + +   LY++ +PE   K+LL  G EK+F     +RN  
Sbjct: 233 LHPVAGGAA-ARPFITH---HNALDMELYMRIAPELYLKRLLVGGFEKVFELNRNFRNEG 288

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--PE 166
               H PEFTM E+Y A+ ++  LM     +    A                  +    +
Sbjct: 289 ISIRHNPEFTMCEFYWAYATFYDLMDLTEELFSTIATEVCGSPIITYQGTELDLTPGKWQ 348

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T  E+  +                D   +    ++ G ++   D    + +++    +
Sbjct: 349 RLTFHESLEKIGG------HSPEFYNDFDKVLAYVRERGEKILKTDKLGKLQAKLFDLDV 402

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  YP   S LA     +P  T RFEL+    E  NA  EL DPI+QR 
Sbjct: 403 EPK--LVAPTFIYHYPTEISPLARRNKDNPDITDRFELFIMGREYGNAFSELNDPIDQRM 460

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++++EK    +E   +DED+L  L   MP ++G  +G DRLVML+T + +I EVI+ 
Sbjct: 461 RFEQQVREKAAGDDEACAMDEDYLRALEYGMPPAAGEGIGIDRLVMLLTDSPSIREVIFF 520

Query: 346 PFSQSN 351
           P  +  
Sbjct: 521 PLLKQE 526


>gi|304414310|ref|ZP_07395678.1| Lysyl-tRNA synthetase (class II) [Candidatus Regiella insecticola
           LSR1]
 gi|304283524|gb|EFL91920.1| Lysyl-tRNA synthetase (class II) [Candidatus Regiella insecticola
           LSR1]
          Length = 504

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 164/365 (44%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + + +R++ V+  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADKEMCYRQRYLDLIVNEEARRTFKIRSQLIAGMRQFMVDKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAV-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  LMK    + R   +      I ++ +   +      
Sbjct: 266 GLSSRHNPEFTMMELYMAYADYRDLMKLTEELFRTLTQTVLGSNIITYGDNTFDFAKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y      + +D PD          AQ  GI++  +     I   I     
Sbjct: 326 RLTMKEAICQYC-----SQIDAPDLDKMDKAVKIAQSLGIKIDKNWGLGRIQCEIFEATA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EEH--LVQPTFITEYPAEVSPLARRNDDNPLITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +++ +    +E    D+D++  L   MP ++G+ +G DR+VML T +++I +VI  
Sbjct: 439 RFDAQVKARTGGDSEAMFYDKDYVTALEHGMPPTAGLGIGIDRMVMLFTNSHSIRDVILF 498

Query: 346 PFSQS 350
           P  + 
Sbjct: 499 PAMRP 503


>gi|295658716|ref|XP_002789918.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226282879|gb|EEH38445.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 633

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 88/372 (23%), Positives = 159/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  RD    YR+R              + R+ + + +R +F E  F+E+++ 
Sbjct: 217 LHQIPSEHYGLRDQEQRYRQRYLDLIMNDKSRNVFITRSKMITYIRRFFDERDFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++++ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNSIAGGAT-AKPFITH---HNDLNMDMFMRVAPELYLKMLIVGGLERVYELGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     ++    +       +  +         N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDVMNVTEELVSGLVKHITGGYETTFHTQTGEEYKVNW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                       L     +  ++ +  +T + +  ++
Sbjct: 393 KAPWKRIEMIPALEEATGEKFPPGDQLHTPETNEFLKKLLMKVNVQCSPPETNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +  +    +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEETC--INPTFITGHPQMMSPLAKYHRNNVGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQASQKAQGDDEAQMIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 571 EVLAFPFMKEDK 582


>gi|144208|gb|AAA23029.1| transfer RNA-Lys synthetase [Campylobacter jejuni]
          Length = 501

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 158/368 (42%), Gaps = 27/368 (7%)

Query: 3   QIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R              L R+ + S +R +F    F+E+++  +
Sbjct: 142 PLPEKYHGLTDIEQRYRKRYVDMIMNVEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMM 201

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN   
Sbjct: 202 HPIAGGA-NAKPFVT---FHNSLGVERFLRIAPELYLKRLIVGGFEAVFEINRCFRNEGM 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A+ +Y+ LM     +     +  N  K   F     N     E I
Sbjct: 258 DLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLDKLNLGKTIEFDGKMINFSKPFERI 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T  +A  +Y  +D           D+  +  + +  G           + + +    +E 
Sbjct: 318 TYKDALCKYGGLDRD------LIEDKEKILTKLKADGFEANEKLELGHLQAELFDNYVEE 371

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L+     D +  +RFEL+ C  EL N  +EL DP++Q  RF
Sbjct: 372 K--LINPTFVIDFPISISPLSRRSDEDSQIAERFELFICGRELANGFNELNDPLDQYERF 429

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+++ K     E   +DEDF+  L   MP ++G  +G DRLVML+T   +I +VI  P 
Sbjct: 430 LKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPA 489

Query: 348 SQSNQEEI 355
            +  + E+
Sbjct: 490 MRPLKSEL 497


>gi|317500712|ref|ZP_07958930.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|316897906|gb|EFV19959.1| lysyl-tRNA synthetase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 642

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 159/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I S++R Y     F+E+++ 
Sbjct: 142 LQILPEKFHGLTNTDMRYRQRYVDLIMNPEAKDTFIKRSKIISAIRRYLDGEGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + L L+ S E   K+L+  G E+++     +RN 
Sbjct: 202 MLVANAGGAA-ARPFETHF---NALNEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V       +  V  +     E
Sbjct: 258 GLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTTKIVYNGVEMDLGKPFE 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D        +          A +  +         DI S    E  
Sbjct: 318 RITMVDAVKKYAGVDWN------EVKTLEEARKLADEHHVEYEEHHKKGDILSLFFEEFA 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFE +    E+ NA  EL DPI+QR 
Sbjct: 372 EEH--LIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDFL  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 430 RFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLF 489

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 490 PTMKTQ 495


>gi|88812906|ref|ZP_01128150.1| lysyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88789828|gb|EAR20951.1| lysyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 506

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 151/367 (41%), Gaps = 24/367 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R  I  S+R  F E  F+E+++ 
Sbjct: 148 LRPLPEKYHGLADQEARYRQRYVDLIVNENARRTFILRGRIIQSIRAAFNEWGFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   LYL+ +PE   K+L+  G EK++     +RN 
Sbjct: 208 MMQPIPGGAA-ARPFITH---HNALDVDLYLRIAPELYLKRLVVGGFEKVYEINRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE+Y+A+  Y  LM     ++R  A                    P  
Sbjct: 264 GVSTRHNPEFTMLEFYQAYADYHDLMDLTEELLRRLAAEVLGTQRLHYQGEAIDLHRP-- 321

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              A    R A ++    L      DR      AQQ  I V        +   I  +  E
Sbjct: 322 --FARRTVRAAILEHNPQLSAAQLDDREAAGGLAQQLDIDVQPHWGLGKLQLEIFEKTTE 379

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA     DP  T+RFEL     E+ N   EL D  +Q  R
Sbjct: 380 HR--LRQPTFVTEYPREVSPLARPKDEDPFVTERFELIIGGREIANGFSELNDADDQAER 437

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++  K+    E    D DF+  L   +P ++G  +G DRLVML T A +I +V+  P
Sbjct: 438 FRAQVAGKEAGDEEAMFYDADFIRALEYGLPPTAGEGIGIDRLVMLFTDAPSIRDVLLFP 497

Query: 347 FSQSNQE 353
             + + E
Sbjct: 498 AMRPSAE 504


>gi|225679117|gb|EEH17401.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 636

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 88/372 (23%), Positives = 159/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  RD    YR+R              + R+ + + +R +F E  F+E+++ 
Sbjct: 217 LHQIPSEHYGLRDQEQRYRQRYLDLIMNDKSRNVFITRSKMITYIRRFFDERDFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++++ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNSIAGGAT-AKPFITH---HNDLNMDMFMRVAPELYLKMLIVGGLERVYELGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     ++    +       +  +         N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDVMNVTEELVSGLVKHITGGYETTFHTQTGEEYKVNW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                       L     +  ++ +  +T + +  ++
Sbjct: 393 KAPWKRIEMIPALEEATGEKFPPGDQLHTPETNEFLKKLLMKVNVQCSPPETNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +  +    +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEETC--INPTFITGHPQMMSPLAKYHRNNVGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQASQKAQGDDEAQMIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 571 EVLAFPFMKEDK 582


>gi|283955126|ref|ZP_06372628.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793339|gb|EFC32106.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 469

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 161/368 (43%), Gaps = 27/368 (7%)

Query: 3   QIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     + +  YR+R              L R+ + S +R +F +  F+E+++  +
Sbjct: 110 PLPEKYHGLIDIEQRYRKRYVDMIMNAEVRKDFLVRSKVVSLIRHFFEDKGFLEVETPMM 169

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN   
Sbjct: 170 HPIAGGA-NAKPFVT---FHNSLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGM 225

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A+ +Y+ LM     +     +  N  K   F     +     E I
Sbjct: 226 DLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLDKLNLGKAIEFDGKMIDFSKPFERI 285

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T  +A  +Y  +D           D+  +  + +  G +         + + +    +E 
Sbjct: 286 TYKDALCKYGGLDKD------LIEDKEKVLAKLKADGFKANEKLELGHLQAELFDNYVEK 339

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L+     D +  +RFEL+ C  EL N  +EL DP++Q  RF
Sbjct: 340 K--LINPTFVIDFPISISPLSRRSDEDSQIAERFELFICGRELANGFNELNDPLDQYERF 397

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+++ K     E   +DEDF+  L   MP ++G  +G DRLVML+T   +I +VI  P 
Sbjct: 398 LKQIEAKNAGDEEACEMDEDFINALGYGMPPTAGEGIGIDRLVMLLTNKKSIRDVILFPA 457

Query: 348 SQSNQEEI 355
            +  + E+
Sbjct: 458 MRPLKSEL 465


>gi|241662570|ref|YP_002980930.1| lysyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|309781153|ref|ZP_07675890.1| lysine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|240864597|gb|ACS62258.1| lysyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|308919974|gb|EFP65634.1| lysine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 514

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 154/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P   +   +++  YR+R                R    +SLR +   N F+E+++ 
Sbjct: 155 LRPLPGDYYGLADQEQKYRQRYVDLIVSKETRDTFRARTKAMASLRNFMAGNGFMEVETP 214

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E+++     +RN 
Sbjct: 215 MLHPIPGGAA-AKPFITH---HNALDMQMFLRIAPELYLKRLIVGGFERVYEINRNFRNE 270

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA + +     ++Q    +      
Sbjct: 271 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDASGTATLTYQGRELDLAKPFH 330

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++  I        +     + +   
Sbjct: 331 RLTICQAIQKYA-----PQYTDAQLADVDFLRAELKKFKIDTNAPQFLNAGVGTLQLVLF 385

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 386 EETAESQLWEPTFIIDYPVEVSPLARGSDTLPGITERFELFITGREIANGFSELNDPEDQ 445

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI
Sbjct: 446 AERFRKQVEQKDAGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVI 505

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 506 LFPHLRRE 513


>gi|11095909|gb|AAG30114.1|AF285758_1 lysyl-tRNA synthetase [Homo sapiens]
          Length = 625

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 238 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 297

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 298 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 353

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +         + 
Sbjct: 354 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDV 413

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + E   +   + L  T     +  R +L        +      T + +  
Sbjct: 414 DFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 473

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 474 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 531

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 532 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 591

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 592 IKEVLLFPAMKPEDKK 607


>gi|260880904|ref|ZP_05403101.2| lysine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849879|gb|EEX69886.1| lysine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 506

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 90/364 (24%), Positives = 157/364 (43%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR  I  S+R Y     ++E+++ 
Sbjct: 152 LRPLPEKFHGLQDVDIRYRQRYLDLIMNPEVRETFRKRTKIIQSIRSYLDTRDYLEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E + K+L+  G ++++     +RN 
Sbjct: 212 VLSTIAGGAA-ARPFVTH---HNALDIDLYLRIATELNLKRLVIGGFDRVYEMGRVFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y+A+  Y  +M     I+  AA+                 S+ + 
Sbjct: 268 GMDVRHNPEFTTIEFYQAYADYTDMMDITEGIVVNAAKSVLGTPVINYQGVEIDLSKVKR 327

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I++ +A       D  +                A + G+          I ++   EK+E
Sbjct: 328 ISMNDAVKEATGKDFLSC------ETVEEARKMADEIGVPYEQRHGIGGILNQAFEEKVE 381

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA   P DPR T RFE +    EL N   EL DPI+Q  R
Sbjct: 382 ET--LMQPTFITGHPTEISPLAKRNPEDPRITDRFEFFIYGRELANGFTELNDPIDQEGR 439

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++++++   +E + +D D++  +   +P + G+ +G DRLVML+T A +I +V+  P
Sbjct: 440 FLDQLKQREAGDDEAHVMDRDYITAMEYGLPPTGGVGIGIDRLVMLLTDAPSIRDVLLFP 499

Query: 347 FSQS 350
             + 
Sbjct: 500 TMKP 503


>gi|307286953|ref|ZP_07567028.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306501899|gb|EFM71188.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0109]
          Length = 498

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 167/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N ++E+++ 
Sbjct: 147 LRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDMDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ +M     IIR AA +V      ++     +  S  +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAVDLGSPFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +   +          A++  + +    T   I +      +
Sbjct: 323 RLHMVDAVKEQTGVDFWQEMTIEE------ARALAKEHNVEITDAMTVGHIINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EDT--LQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRD 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ +E+++  +E + +DEDF+  L   +P + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PTMR 498


>gi|90579832|ref|ZP_01235640.1| lysyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438717|gb|EAS63900.1| lysyl-tRNA synthetase [Vibrio angustum S14]
          Length = 501

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 163/366 (44%), Gaps = 22/366 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R             ++ R+ + +++R++ +++QF+E+++ 
Sbjct: 140 LRPLPEKFHGLTDQEQRYRQRYVDLIINEESRNTMIMRSKVVAAIRQFMLKHQFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 200 MMHPIAGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  L+    +++   A+         +            
Sbjct: 256 GISPRHNPEFTMMEFYMAYADYNDLIDFTEDLLSSVAKELCGTTALPYGEHVIEFSGPYT 315

Query: 167 YITVAEAFARYANIDL-GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +T+ EA   Y   +     L      ++ L+   A + G+ V    T   +   I  E 
Sbjct: 316 RVTMLEAIQHYNPDNRRIQDLSYEQIKNKELMVDIASEVGVEVESFWTCGQLLEEIFGET 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     DP  T RFE +    E+ N   EL D  +Q 
Sbjct: 376 AEPK--LLQPTFITGYPADISPLARRSDEDPFITDRFEFFVGGREVANGFSELNDAQDQD 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +M  K    +E    DED++  L   +P ++G  +G DRLVML T ++ I +VI 
Sbjct: 434 SRFKAQMAAKDAGDDEAMQYDEDYIRALEFGLPPTAGQGIGIDRLVMLFTDSHTIRDVIL 493

Query: 345 TPFSQS 350
            P  + 
Sbjct: 494 FPSLRP 499


>gi|226288139|gb|EEH43652.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 609

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 88/372 (23%), Positives = 159/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  RD    YR+R              + R+ + + +R +F E  F+E+++ 
Sbjct: 217 LHQIPSEHYGLRDQEQRYRQRYLDLIMNDKSRNVFITRSKMITYIRRFFDERDFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++++ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNSIAGGAT-AKPFITH---HNDLNMDMFMRVAPELYLKMLIVGGLERVYELGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     ++    +       +  +         N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDVMNVTEELVSGLVKHITGGYETTFHTQTGEEYKVNW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                       L     +  ++ +  +T + +  ++
Sbjct: 393 KAPWKRIEMIPALEEATGEKFPPGDQLHTPETNEFLKKLLMKVNVQCSPPETNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +  +    +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEETC--INPTFITGHPQMMSPLAKYHRNNVGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQASQKAQGDDEAQMIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 571 EVLAFPFMKEDK 582


>gi|206889994|ref|YP_002249051.1| lysyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741932|gb|ACI20989.1| lysyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 494

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 166/368 (45%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              +KR +I   LRE+     F+E+++ 
Sbjct: 140 LRPLPEKWHGLKDIEARYRQRYVDLIVNPSVKETFVKRQLIIKYLREFLENEGFLEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   LYL+ +PE   K+LL  G E++F     +RN 
Sbjct: 200 MMHTIAGGAR-AKPFKT---YHEALDMELYLRIAPELYLKRLLVGGFERVFEIGKNFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A++ Y  LM     ++    + V       + +   +     +
Sbjct: 256 GISTKHNPEFTMIEFYVAYKDYNWLMDFTEKLLSYITQKVCGSLQVKYGDYIIDFTPPFK 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A            +      D +L +  A+  GI +    + S +   I  E +
Sbjct: 316 RITMFDALK-------NKGVPEEVMKDCNLAFKWAKAKGIEIPEGSSLSKVLDEIFKEVV 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  YP   S LA     +P   +RFEL+    E+ NA  EL DP++Q+ 
Sbjct: 369 EPE--LIQPTFIIDYPVELSPLAKRKKDNPELVERFELFIAGREMANAFSELNDPLDQKE 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++E+ K   E   +DEDF+  L   MP ++G  +G DRLVM++T   +I +VI  
Sbjct: 427 RFLRQLEERLKGDEEVPEMDEDFVRALEIGMPPAAGEGIGIDRLVMILTNNQSIRDVILF 486

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 487 PLLRPETK 494


>gi|187927988|ref|YP_001898475.1| lysyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|238691787|sp|B2U8U9|SYK_RALPJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|187724878|gb|ACD26043.1| lysyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 514

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 154/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P   +   +++  YR+R                R    +SLR +   N F+E+++ 
Sbjct: 155 LRPLPGDYYGLADQEQKYRQRYVDLIVSKETRDTFRARTKAMASLRNFMAGNGFMEVETP 214

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E+++     +RN 
Sbjct: 215 MLHPIPGGAA-AKPFITH---HNALDMQMFLRIAPELYLKRLIVGGFERVYEINRNFRNE 270

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA + +     ++Q    +      
Sbjct: 271 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDASGTATLTYQGRELDLAKPFH 330

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++  I        +     + +   
Sbjct: 331 RLTICQAIQKYA-----PQYTDAQLADVDFLRAELKKFKIDTNAPQFLNAGVGTLQLVLF 385

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 386 EETAESQLWEPTFIIDYPVEVSPLARGSDTLPGITERFELFITGREIANGFSELNDPEDQ 445

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI
Sbjct: 446 AERFRKQVEQKDAGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVI 505

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 506 LFPHLRRE 513


>gi|119897778|ref|YP_932991.1| lysyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166229792|sp|A1K5J9|SYK_AZOSB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|119670191|emb|CAL94104.1| lysyl-tRNA synthetase [Azoarcus sp. BH72]
          Length = 500

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 156/366 (42%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ +  S+R Y + + F+E+++ 
Sbjct: 147 LRPLPDKFHGLTDVEQKYRQRYLDLIMSEQTRFTFVARSRMVQSIRNYMINHGFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   L+L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 207 MMHPIPGGAA-AKPFVTH---HNALDMELFLRIAPELYLKRLVVGGLEKVFEVNRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA      + F +Q    +      
Sbjct: 263 GLSPRHNPEFTMMEFYEAYADYRSLMNFTEGLIRQAAREALGAESFVYQGRELDLSKPFH 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y               D   +  + Q  G +V        +  ++     
Sbjct: 323 RLTIVQAIRKY-----HPGFSEAQLADAEWVKEKIQAFGEKVKPG-GLGSLQLQLFEACA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    ++P  T+RFEL+    E+ N   EL DP +Q  
Sbjct: 377 EAE--LWEPTFIIDYPVEVSPLARASDSNPEITERFELFIVGREIANGFSELNDPEDQAA 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + Q K+    E    D D++  L   +P + G  +G DRLVML+T + +I +VI  
Sbjct: 435 RFLAQAQAKEAGDEEAMYYDADYIRALEFGLPPTGGCGIGIDRLVMLLTDSASIRDVILF 494

Query: 346 PFSQSN 351
           P  +  
Sbjct: 495 PQMRPE 500


>gi|169848307|ref|XP_001830861.1| lysine-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|116508030|gb|EAU90925.1| lysine-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 592

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 88/377 (23%), Positives = 157/377 (41%), Gaps = 32/377 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQ+PS  +  +D    YR+R              + R+ I + +R +     F+E+++ 
Sbjct: 203 LHQLPSSHFGLKDQETRYRKRYLDLILNENSRKIFITRSRIIAYIRRFLDNLGFMEVETP 262

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
                 G  T  + F T     + +   L+L+ +PE   K+L+  G ++++     +RN 
Sbjct: 263 ITSLLAGGAT-AKPFVTH---HNDLNLDLFLRIAPELYLKQLVVGGLDRVYEIGRVFRNE 318

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC------------AAEVANQKIFSFQ 155
                H PEFT+ E+Y A+   E LM+    ++                   N+     +
Sbjct: 319 GIDLTHNPEFTICEFYMAYADQEDLMEITEIMLEGLVKSLTGGTKLIYHPDGNKGQEGAK 378

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
            +        +   + E       +                L     +  +  +   T +
Sbjct: 379 QIELEFKRPWKRYDMIETLEEKLGVKFPPGDQLHTDETNKWLRELCTKHNVECSEPRTNA 438

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            +  +++ E IEP       + +  +P   S LA  + + P   +RFE + C  E CNA 
Sbjct: 439 RLLDKLVGEFIEPLC--QSPSFIVGHPQVMSPLAKWHRSRPGLCERFEGFMCGKEFCNAY 496

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP EQR RFE+++++K++   E   IDE F+  L   +  + G  +G DRLVM +T
Sbjct: 497 TELNDPFEQRLRFEEQVRQKEQGDEEAQGIDETFIDALEHGLAPTGGWGLGIDRLVMFLT 556

Query: 335 GANNINEVIWTPFSQSN 351
            + NI EV+  P  +  
Sbjct: 557 DSTNIKEVLLFPAMKPE 573


>gi|315055975|ref|XP_003177362.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311339208|gb|EFQ98410.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 609

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 92/372 (24%), Positives = 160/372 (43%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  +D   R              R   + R+ I S +R YF E  F+E+++ 
Sbjct: 217 LHQIPSEHYGLKDQEQRFRQRYLDLIMNDSSRNVFVTRSKIVSYIRRYFDERDFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNAIAGGAT-AKPFITH---HNELNMNLFMRIAPELYLKMLIVGGLERVYEMGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     LM    +++    +       +  +       N N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDLMNVTEDLVSGLVKHVTGGYETVFHTQSGETYNVNW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                 +     L    ++  +      T + +  ++
Sbjct: 393 KAPWKKIEMIPALEEATGEKFPPGEQLHTEETNEFLKRVLKKVNVECTPPLTNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        + +  +P   S LA  +   P   +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEEKC--INPSFIIGHPQMMSPLAKYHRDHPGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K++  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQARQKEQGDDEAQMIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 571 EVLAFPFMKEDK 582


>gi|255657502|ref|ZP_05402911.1| lysyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296452826|ref|ZP_06894513.1| lysine--tRNA ligase [Clostridium difficile NAP08]
 gi|296879922|ref|ZP_06903894.1| lysine--tRNA ligase [Clostridium difficile NAP07]
 gi|296258374|gb|EFH05282.1| lysine--tRNA ligase [Clostridium difficile NAP08]
 gi|296429036|gb|EFH14911.1| lysine--tRNA ligase [Clostridium difficile NAP07]
          Length = 509

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 172/365 (47%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              L R     +LR Y  +  F+E+++ 
Sbjct: 146 LQVLPEKYHGLKDQELRYRQRYVDLIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +  P+YL+ + E   K+L+  G +K++     +RN 
Sbjct: 206 ILNTIAGGA-NARPFIT---NHNTLHIPMYLRIANELYLKRLIVGGFDKVYEMGRMFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPE 166
                H PE+T +E Y+A+  Y  +M+   N+I   AEVA   +  ++Q    N     +
Sbjct: 262 GMDLKHNPEYTAIELYQAYADYTDMMEITENVIAHMAEVATGSMIVNYQGTEINFTPPWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +    Y+ +D  T   + +  +       A++ GI +       ++ +    E  
Sbjct: 322 RMSMEDCVKEYSGVDFSTINTDEEALE------VAREKGIEIKPGMRRGEVINAFFEEFG 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L+     DPR T RFE++A   EL NA  EL DPI+Q+ 
Sbjct: 376 EDK--LIQPTFITHHPVEVSPLSKRNAEDPRRTDRFEVFANKWELANAFSELNDPIDQKG 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++++++   +E + +DEDFL  L   +P + G+ +G DR++ML+T + +I +V+  
Sbjct: 434 RFIDQLRKRELGDDEAFEMDEDFLKALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLF 493

Query: 346 PFSQS 350
           P  + 
Sbjct: 494 PTMKP 498


>gi|268591698|ref|ZP_06125919.1| lysine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291312657|gb|EFE53110.1| lysine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 505

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I + +R + V   F+E+++ 
Sbjct: 149 LRPLPDKFHGLSDQETRYRQRYLDLIANDESRHTFIVRSKILAEVRNFMVSYGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L+    ++ R    +V    +  +     +      
Sbjct: 265 GLSPRHNPEFTMMELYMAYADYRDLIALTEDLFRTLTQKVLGNTVVQYGEQEFDFGKPFT 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       AQ  GI++        +   I  E  
Sbjct: 325 KMTMKEAICKY-----RPETNVADLDDMDKAVAIAQSIGIKIEKSWGLGRVQCEIFEEVA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 380 ESH--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++K +  +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 438 RFAEQVRQKDEGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILF 497

Query: 346 PFSQSNQ 352
           P  + ++
Sbjct: 498 PALRPSK 504


>gi|212637016|ref|YP_002313541.1| lysyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226736754|sp|B8CU98|SYK_SHEPW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|212558500|gb|ACJ30954.1| Lysyl-tRNA synthetase, class-2 [Shewanella piezotolerans WP3]
          Length = 500

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 86/367 (23%), Positives = 162/367 (44%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + ++ +F+E+++ 
Sbjct: 139 LRPLPEKFHGLSDQETRYRQRYVDLIVNEESREAFIMRSKVVSAIRNFMIKKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHSIPGGAS-ARPFETH---HNALDMAMYLRIAPELYLKRLVVGGFERVFEVNRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A ++       +     +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIATDLCGSTQLPYGEHTVDFGGPYA 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y   +    ++   +  D   +   A+  G+ +    T   +   I  E 
Sbjct: 315 RLSMLDAIKKYNPENATIQSMTYEEVKDVEFMRNLAKSIGMTIEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPQ--LMQPTFITGYPADISPLARRNDENHFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 NRFKAQVDAKDAGDDEAMFYDADYIRALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|169335601|ref|ZP_02862794.1| hypothetical protein ANASTE_02016 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258339|gb|EDS72305.1| hypothetical protein ANASTE_02016 [Anaerofustis stercorihominis DSM
           17244]
          Length = 491

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 86/362 (23%), Positives = 154/362 (42%), Gaps = 27/362 (7%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     + +  YR+R              L R+ I   +R++     F+E+++  L 
Sbjct: 140 LPEKFHGLKDPELRYRQRYVDLIMNPEVKDVFLMRSKIVKCMRDFMDGEGFVEVETPVLG 199

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G   + R F T     + +  P+Y++ + E   K+L+  G +K++     +RN    
Sbjct: 200 TLAGGA-NARPFITH---HNTLDIPMYMRIATELPLKRLVVGGFDKVYEIGRIFRNEGMD 255

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPEYIT 169
             H PEFT +E Y+A+  +  +M     +    A +        F +   +  +    + 
Sbjct: 256 ATHNPEFTTMESYQAYADFNDVMNMSEKMYEYIASKTLGTTSVEFGDNEISLKAPFRRVK 315

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + +       +D           D  +   +A++  +    +     I   +  E  E  
Sbjct: 316 MVDLITEETGVDFDKI------TDIEVAREEAKKLNVVPEEEWGIGKIIEEVFEEHCEAK 369

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  +P   S LA     D R+T+RFEL+    E CN   EL DP +QR RF 
Sbjct: 370 --LIQPTFVTHHPVEISPLAKKCMDDDRYTQRFELFIAGHEYCNGFSELNDPFDQRERFA 427

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +M++K    +E +P D DF+  L   +P + G+  G DRLVML+T  ++I +VI  P  
Sbjct: 428 AQMEKKATGDDEAHPYDTDFINALEVGLPPTGGVGFGVDRLVMLLTNQSSIRDVILFPTM 487

Query: 349 QS 350
           + 
Sbjct: 488 KP 489


>gi|126305059|ref|XP_001378881.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 651

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 85/377 (22%), Positives = 163/377 (43%), Gaps = 28/377 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+E+++ 
Sbjct: 264 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFITRSKIITYIRSFLDELGFLEVETP 323

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + + PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 324 MMNFIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 379

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +         + 
Sbjct: 380 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVKNITGSYKVSYHPDGPEGQAYDI 439

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 440 DFTPPFRRISMVEELEKALGMKLPETSLFETEETRKILDDICVARDVECPPPRTTARLLD 499

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    ++RFEL+    E+CNA  EL 
Sbjct: 500 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSRDGLSERFELFVMKKEICNAYTELN 557

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ Q+  FE++ + K    +E   +D+ F   L   +P ++G  MG DRL ML+T ++N
Sbjct: 558 DPVRQQQFFEEQAKAKAAGDDEAMIMDDSFCTALEYGLPPTAGWGMGIDRLTMLLTDSSN 617

Query: 339 INEVIWTPFSQSNQEEI 355
           I EV+  P  +   +++
Sbjct: 618 IKEVLLFPAMKPENKKV 634


>gi|55741637|ref|NP_001006968.1| lysyl-tRNA synthetase [Rattus norvegicus]
 gi|53733461|gb|AAH83652.1| Lysyl-tRNA synthetase [Rattus norvegicus]
 gi|149038242|gb|EDL92602.1| lysyl-tRNA synthetase, isoform CRA_b [Rattus norvegicus]
          Length = 626

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 158/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 239 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 298

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 299 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 354

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++               +           
Sbjct: 355 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVRSITGSYKITYHPDGPEGQAYEI 414

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 415 DFTPPFRRISMVEELEKVLGVKLPETSLFETEETRKILDDICVARAVECPPPRTTARLLD 474

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  +      T+RFEL+    E+CNA  EL 
Sbjct: 475 KLVGEFLEVTC--ISPTFICDHPQIMSPLAKWHRCKEGLTERFELFVMKKEICNAYTELN 532

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 533 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNN 592

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 593 IKEVLLFPAMKPEDKK 608


>gi|304440039|ref|ZP_07399932.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371531|gb|EFM25144.1| lysine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 633

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 169/365 (46%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D   R R                +KR+ I  +++EY  E  F+E+++ 
Sbjct: 135 LQILPEKFHGLKDIELRYRMRYVDLIVNPEVKDVFIKRSKIIKAIKEYLDERGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + + F T     + +   + ++ + E   K+L+  G +K++     +RN 
Sbjct: 195 ILGSVAGGA-NAKPFLTH---HNTLDMDMQMRIANELYLKRLIVGGFDKVYELGKMFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  YE++M+    I    A+        ++Q       +   
Sbjct: 251 GISPRHNPEFTNIELYQAYVDYEEMMRITEGIFEYVAKKVLGTTKINYQGKEIELKAPWR 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   YA +D      + +          A+  G+ V    T   + S +  E  
Sbjct: 311 RITMIDAINEYAGVDFNEINTDEE------AREIAKAKGLEVDPKWTRGHVISEMFEEFC 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T + ++P   S LA   P DPR T+RFE +    EL NA  EL DPI+QR 
Sbjct: 365 ESH--LVQPTFVTKHPVEVSPLAKRDPEDPRLTQRFEAFMNTWELANAFSELNDPIDQRE 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++++EK+   +E +P+D DFL  +   +P + G+ +G DR++M++     I ++I+ 
Sbjct: 423 RFEEQLREKEMGDDEAHPMDTDFLNAIEVGLPPTGGLGIGVDRMIMILLDQPTIRDIIFF 482

Query: 346 PFSQS 350
           P  + 
Sbjct: 483 PTMKP 487


>gi|115352206|ref|YP_774045.1| lysyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|172061073|ref|YP_001808725.1| lysyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|122322758|sp|Q0BDR2|SYK_BURCM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238689175|sp|B1YT20|SYK_BURA4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|115282194|gb|ABI87711.1| lysyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|171993590|gb|ACB64509.1| lysyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 508

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++     F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTRTIASIRKFMDNADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V+     +     + +   
Sbjct: 325 RLTITQAIQKYA-----PQYTDGQLSDDAFLRTELKRFGVDVSQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAESQLWEPTYIIDYPVEVSPLARASDTTPGITERFELFMTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFKKQVEQKDAGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|255535637|ref|YP_003096008.1| lysyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255341833|gb|ACU07946.1| Lysyl-tRNA synthetase (class II) [Flavobacteriaceae bacterium
           3519-10]
          Length = 565

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 162/375 (43%), Gaps = 36/375 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  + +++R +F + 
Sbjct: 136 LRPLPQPRTDENGVTHDAFNDPELRYRQRYVDLIVNPQVKDVFVKRTKLFNAMRTFFNDA 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            + E+++  LQ  PG     + F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 196 GYFEVETPILQSIPGGAA-AKPFITH---HNALDIPLYLRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVN 158
           F+  +RN      H PEFT LE Y A++ Y  +M     ++   A         +F    
Sbjct: 252 FSKNFRNEGMDRTHNPEFTALEIYVAYKDYNWMMDFTEKLLEYCAVQVNGSTNATFGEHQ 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    I++ EA   +   D+              L+  A+  GI V        + 
Sbjct: 312 IDFKAPYPRISMTEAILNFTGFDITG-------KSESELFDFAKSIGIDVNETMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   + +    T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGEKCEGN--FIQPTFITDYPIEMSPLTKKHRSKEGLTERFELMVCGKEVANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE +    ++  +E   ID DFL  L   MP +SG+ +G DRL+M +T   
Sbjct: 423 NDPIDQRERFEAQAALSERGDDEAMFIDNDFLRALEYGMPPTSGLGIGMDRLIMFLTNNP 482

Query: 338 NINEVIWTPFSQSNQ 352
           +I E+++ P  +  +
Sbjct: 483 SIQEILFFPQMKPEK 497


>gi|153815948|ref|ZP_01968616.1| hypothetical protein RUMTOR_02193 [Ruminococcus torques ATCC 27756]
 gi|145846767|gb|EDK23685.1| hypothetical protein RUMTOR_02193 [Ruminococcus torques ATCC 27756]
          Length = 576

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 159/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I S++R Y     F+E+++ 
Sbjct: 76  LQILPEKFHGLTNTDMRYRQRYVDLIMNPEAKDTFIKRSKIISAIRRYLDGEGFMEVETP 135

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + L L+ S E   K+L+  G E+++     +RN 
Sbjct: 136 MLVANAGGAA-ARPFETHF---NALNEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNE 191

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V       +  V  +     E
Sbjct: 192 GLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTTKIVYNGVEMDLGKPFE 251

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D        +          A +  +         DI S    E  
Sbjct: 252 RITMVDAVKKYAGVDWN------EVKTLEEARKLADEHHVEYEEHHKKGDILSLFFEEFA 305

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFE +    E+ NA  EL DPI+QR 
Sbjct: 306 EEH--LIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELNDPIDQRE 363

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDFL  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 364 RFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTNSAAIRDVLLF 423

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 424 PTMKTQ 429


>gi|212704562|ref|ZP_03312690.1| hypothetical protein DESPIG_02622 [Desulfovibrio piger ATCC 29098]
 gi|212671961|gb|EEB32444.1| hypothetical protein DESPIG_02622 [Desulfovibrio piger ATCC 29098]
          Length = 528

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 165/367 (44%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +    +D    YR+R               KR+MI S  R +  E  F+E+++ 
Sbjct: 173 MRPLPEKYHGLKDMETRYRQRYVDLIVTERAREIFRKRSMIVSEFRRFLEERGFMEVETP 232

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G     R F T     + +   LY++ +PE   K+LL  G EK+F     +RN 
Sbjct: 233 MMQAVAGGAA-ARPFET---YHNALDLKLYMRIAPELYLKRLLVGGFEKVFELNRNFRNE 288

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFS-EP 165
                H PEFT  E+Y A+ ++  LM     +  R A +V    + ++Q    +    + 
Sbjct: 289 GIDTRHNPEFTSCEFYWAYANFHDLMDLTEELFARLANKVCGGTVITYQGQEIDLTPGKW 348

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             ++  E+  +                D + +    +  G +    ++   + +++    
Sbjct: 349 TRMSFYESLTKIGG------HSPEFYNDYNKVRDYIRSRGEKATDSESLPKLHAKLFDLD 402

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +     +  YP   S L+      P  T RFEL+    EL NA  EL DP++QR
Sbjct: 403 VEEK--LIQPHFIYHYPTEISPLSRRNNEHPDLTDRFELFITGRELANAFSELNDPVDQR 460

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE++++EK+   +E + +DEDFL  L   MP ++G  +G DRLVML+T + +I EVI 
Sbjct: 461 LRFEEQVREKEAGDDEAHAMDEDFLRALEYGMPPAAGEGIGIDRLVMLLTDSASIREVIL 520

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 521 FPLLRPE 527


>gi|126173118|ref|YP_001049267.1| lysyl-tRNA synthetase [Shewanella baltica OS155]
 gi|153002000|ref|YP_001367681.1| lysyl-tRNA synthetase [Shewanella baltica OS185]
 gi|160876720|ref|YP_001556036.1| lysyl-tRNA synthetase [Shewanella baltica OS195]
 gi|217974575|ref|YP_002359326.1| lysyl-tRNA synthetase [Shewanella baltica OS223]
 gi|304410530|ref|ZP_07392148.1| lysyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307304623|ref|ZP_07584373.1| lysyl-tRNA synthetase [Shewanella baltica BA175]
 gi|166229825|sp|A3D0Y5|SYK_SHEB5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229826|sp|A6WS29|SYK_SHEB8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082968|sp|A9L1I0|SYK_SHEB9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|125996323|gb|ABN60398.1| lysyl-tRNA synthetase [Shewanella baltica OS155]
 gi|151366618|gb|ABS09618.1| lysyl-tRNA synthetase [Shewanella baltica OS185]
 gi|160862242|gb|ABX50776.1| lysyl-tRNA synthetase [Shewanella baltica OS195]
 gi|217499710|gb|ACK47903.1| lysyl-tRNA synthetase [Shewanella baltica OS223]
 gi|304351014|gb|EFM15414.1| lysyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306912025|gb|EFN42449.1| lysyl-tRNA synthetase [Shewanella baltica BA175]
 gi|315268920|gb|ADT95773.1| lysyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 500

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 87/367 (23%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P+  +   +++  YR+R              + R+ + S++R + ++ +F+E+++ 
Sbjct: 139 LRPLPADYYGLADQEMRYRQRYVDLIVNEDSRNAFIMRSKVVSAIRNFMIKKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A          +     +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIAIELLGSAQMPYGEHTVDFGGPYA 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA  +Y   +     +      D   +   A+  G+++    T   +   I  E 
Sbjct: 315 RLSMLEAIQKYNPDNATIQAMTYEQVKDVEFMRDLAKSLGMKIEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AE--WQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 NRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|332221732|ref|XP_003260018.1| PREDICTED: lysyl-tRNA synthetase isoform 2 [Nomascus leucogenys]
          Length = 625

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 163/376 (43%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 238 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 297

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 298 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 353

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +         + 
Sbjct: 354 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDI 413

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I + E   +   + L  T     +  R +L        +      T + +  
Sbjct: 414 DFTPPFQRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 473

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 474 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 531

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP++QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 532 DPMQQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 591

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  + + ++
Sbjct: 592 IKEVLLFPAMKPDDKK 607


>gi|167586750|ref|ZP_02379138.1| lysyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 508

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 154/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++     F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMDTADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIQKYA-----PQYTDGQLSDDAFLRSELKRLGVDVTQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAEAQLWEPTYIIDYPVEVSPLARASDTVPGITERFELFMTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|330817653|ref|YP_004361358.1| Lysyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370046|gb|AEA61402.1| Lysyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 509

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  +  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQEMRYRQRYVDLIVTPETRNTFRARTKAIASIRKFMADADFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  T  + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MLHPIPGGAT-AKPFVTH---HNALDMEMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  +M     +IR  A +        +Q    +      
Sbjct: 266 GVSPRHNPEFTMMEFYAAYTDYRWMMDFTEQVIRQAAVDSLGTATIQYQGRELDLAKPFH 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V      +     + +   
Sbjct: 326 RLTIKQAIQKYA-----PDYSDAQLADVAFLRTELKRFGVDVGQPAFLNAGLGALQLALF 380

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA    A P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 381 EETAEAQLWEPTFIIDYPVEVSPLARESDAMPGVTERFELFMTGREIANGFSELNDPEDQ 440

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++ +K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 441 AARFKKQVDQKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 500

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 501 LFPHLRRE 508


>gi|307245669|ref|ZP_07527755.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306853371|gb|EFM85590.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
          Length = 500

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     +++  YR+R              + R+ + S +R++F+E  FIE+++ 
Sbjct: 146 LRPLPNKVQGLTDQETRYRQRYLDLISNEESRRTFMIRSKVVSGIRQFFLEKDFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-AKPFVTH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++       +     +     E
Sbjct: 262 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLAIDILGTTTVPYGEYVFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y N      +   D          A+  GI +        + + I  E  
Sbjct: 322 RITMHDAIVKYGN-----GITREDLDSFEKSVEIAKGLGIEIQKSWGLGSVVNAIFEEVA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 377 EHQ--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DEDF+  L   +P ++G  +G DRL M+   A +I +VI  
Sbjct: 435 RFDAQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PAMR 498


>gi|332846548|ref|XP_003315273.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 625

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 238 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 297

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 298 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRVAPELYHKMLVVGGIDRVYEIGRQFRNE 353

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +         + 
Sbjct: 354 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDV 413

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + E   +   + L  T     +  R +L        +      T + +  
Sbjct: 414 DFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 473

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 474 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 531

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 532 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 591

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 592 IKEVLLFPAMKPEDKK 607


>gi|32035006|ref|ZP_00135078.1| COG1190: Lysyl-tRNA synthetase (class II) [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208285|ref|YP_001053510.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|165976226|ref|YP_001651819.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|303251193|ref|ZP_07337372.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303252272|ref|ZP_07338438.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247791|ref|ZP_07529828.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307250030|ref|ZP_07531998.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307252383|ref|ZP_07534280.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307254631|ref|ZP_07536462.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307256857|ref|ZP_07538635.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|307259082|ref|ZP_07540812.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|189082343|sp|A3N0G9|SYK_ACTP2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710880|sp|B0BP90|SYK_ACTPJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126097077|gb|ABN73905.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|165876327|gb|ABY69375.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|302648731|gb|EFL78921.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302649927|gb|EFL80104.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306855734|gb|EFM87900.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306857952|gb|EFM90040.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306860305|gb|EFM92321.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306862426|gb|EFM94389.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306864591|gb|EFM96496.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306866749|gb|EFM98607.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 500

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     +++  YR+R              + R+ + S +R++F+E  FIE+++ 
Sbjct: 146 LRPLPNKVQGLTDQETRYRQRYLDLISNEESRRTFMIRSKVVSGIRQFFLEKDFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-AKPFITH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++       +     +     E
Sbjct: 262 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLAIDILGTTTVPYGEYVFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y N      +   D          A+  GI +        + + I  E  
Sbjct: 322 RITMHDAIVKYGN-----GITREDLDSFEKSVEIAKGLGIEIQKSWGLGSVVNAIFEEVA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 377 EHQ--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DEDF+  L   +P ++G  +G DRL M+   A +I +VI  
Sbjct: 435 RFDAQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PAMR 498


>gi|149277988|ref|ZP_01884127.1| lysine--tRNA ligase [Pedobacter sp. BAL39]
 gi|149231186|gb|EDM36566.1| lysine--tRNA ligase [Pedobacter sp. BAL39]
          Length = 592

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 95/377 (25%), Positives = 164/377 (43%), Gaps = 36/377 (9%)

Query: 1   MHQIPS----------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              + R+ + S++R YF E 
Sbjct: 161 LKPLPIVKRDEEGKIYDGFTDPELRYRQRYVDLTVNPDFKQIFINRSRVISTMRNYFDEQ 220

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ   G     R F+T     + +  PLYL+ + E   K+L+ AG + ++ 
Sbjct: 221 GWMEVETPILQPIHGGAA-ARPFATH---HNTLDMPLYLRIANELYLKRLIVAGFDGVYE 276

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVN 158
           F   +RN      H PE+T +E Y A++ Y  +M      +   A   + K   +     
Sbjct: 277 FGKMFRNEGMDRTHNPEYTGMEIYVAYKDYIWMMGMVEECLEKVALAIHGKPVVTVGQHE 336

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     E +T+ E+  +Y  ID+              L        I V        + 
Sbjct: 337 INFEGPYEKLTMYESIEKYTGIDVSAMT-------EEELKAVCASLNIEVDASMGRGKLI 389

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             +  EK+E N  +   T +  YP   + LA  +       +RFE++    E+ NA  EL
Sbjct: 390 DELFSEKVEAN--LIQPTFITDYPLEMTPLAKKHRTKDGLVERFEIFINGKEVGNAYSEL 447

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q+ RFE +++   +   E   +D+DF+  L   MP +SG+  G DRLVML+T  +
Sbjct: 448 NDPIDQKERFEDQLKLAARGDAEAMVMDDDFVRALEYGMPPTSGLGFGIDRLVMLMTNQS 507

Query: 338 NINEVIWTPFSQSNQEE 354
            I EV++ P  +  ++ 
Sbjct: 508 TIQEVLFFPQMRPERKA 524


>gi|288941014|ref|YP_003443254.1| lysyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896386|gb|ADC62222.1| lysyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 505

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 154/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R  I   +R+Y     ++E+++ 
Sbjct: 149 LRPLPEKFHGLTDMESRYRQRYLDLIMNTGTRDTFRVRTAIVQFIRDYLNGRGYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   L+L+ +PE   K+L+  G EK++     +RN 
Sbjct: 209 MMQVIPGGAV-ARPFITH---HNALDMQLFLRIAPELFLKRLVVGGFEKVYEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM    +++R  A  V       +Q  N +      
Sbjct: 265 GLSTRHNPEFTMLEFYEAYADYHDLMDLTEDMLRRMAIEVLGTTQIQYQGANYDFGRPFA 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V +A  ++        L   D  D   L    ++ G+          +   +  + +
Sbjct: 325 RLSVRDAILQF-----NPELTAADVDDLDRLRAVVERHGVVPKATWGLGKLQVELFEQTV 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T + RYP   S LA     DP  T RFEL+    E+ N   EL D  +Q  
Sbjct: 380 ESR--LMDPTFITRYPTEVSPLARRNDEDPSVTDRFELFVGGREIANGFSELNDAEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK+    E    D D++  L   +P ++G  +G DRLVML T + +I +V+  
Sbjct: 438 RFRAQVAEKEAGDQEAMYYDADYVRALEHGLPPTAGEGIGIDRLVMLFTDSPSIRDVLLF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PHMRPE 503


>gi|253988707|ref|YP_003040063.1| lysyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|211637968|emb|CAR66596.1| lysyl-trna synthetase (ec 6.1.1.6) (lysine--trna ligase) (lysrs)
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253780157|emb|CAQ83318.1| lysyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 504

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 159/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R + +   F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQETRYRQRYLDLIANEESRKTFQIRSQVLSVMRNFIISKGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MMQVIPGGAA-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ L+     + R  A+ V       +     +      
Sbjct: 265 GVSPRHNPEFTMLELYMAYADYKDLIVLIEELFRTLAQNVLGDTRVKYGEQEFDFGKPFA 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA  +Y         +  D  D       A+  GI V        +   I  E  
Sbjct: 325 QMSMKEAICKY-----RPETNMADLDDMDKAVAIAESLGIDVEKGWGLGRVQCEIFEETA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 380 ESR--LIQPTFITEYPAEVSPLARRNNDNPFITDRFEFFIGGREIGNGFSELNDAEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++K +  +E    DED++  L   MP ++G+ +G DR+VML T ++ I +VI  
Sbjct: 438 RFAEQVRQKDEGDDEAMFYDEDYITALEHGMPPTAGLGIGIDRMVMLFTNSHTIRDVILF 497

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 498 PAMRPQK 504


>gi|332030530|gb|EGI70218.1| Lysyl-tRNA synthetase [Acromyrmex echinatior]
          Length = 651

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 86/373 (23%), Positives = 156/373 (41%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +  +D    +R+R                R  I + +R++     F+E+++ 
Sbjct: 264 LHMLPHLYFGLKDRETRFRQRYLDLILNDKVRQIFHIRAKIVAYVRKFLDNMGFLEVETP 323

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 324 MMNMIAGGAT-AKPFITH---HNELNMDLFMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 379

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+   N++    +  +       +           
Sbjct: 380 GIDMTHNPEFTTCEFYMAYADYNDLMEITENMVSGMVKSIHGTYKIEYHPDGPEGKACEI 439

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I++         + L              L     +  I      T + +  
Sbjct: 440 DFTPPFKRISMMTQLEEVLQVKLPEADQLNTPTAIKFLSDLCDKHEIECPPPRTSARLLD 499

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 500 KLVGEFIEDTC--INPTYIIDHPQAMSPLAKWHRSKKGLTERFELFVMKKEICNAYTELN 557

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++ ++K     E   +DE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 558 DPVIQRERFEQQAKDKAAGDEEAQSVDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 617

Query: 339 INEVIWTPFSQSN 351
           I EV++ P  + +
Sbjct: 618 IKEVLFFPQMKPD 630


>gi|170702007|ref|ZP_02892927.1| lysyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170133097|gb|EDT01505.1| lysyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 508

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++     F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTRTIASIRKFMDNADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTAAIQYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V+     +     + +   
Sbjct: 325 RLTITQAIQKYA-----PQYTDGQLSDDAFLRTELKRFGVDVSQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAESQLWEPTYIIDYPVEVSPLARASDTTPGITERFELFMTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFKKQVEQKDAGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|292670845|ref|ZP_06604271.1| lysine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647466|gb|EFF65438.1| lysine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 503

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 155/364 (42%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR  I  S+R Y  E  F+E+++ 
Sbjct: 149 LRPLPEKFHGLKDVDTRYRQRYIDLMVNYEVRDTFRKRTRIIQSIRRYLDERDFLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E + K+L+  G ++++     +RN 
Sbjct: 209 VLSTIAGGAA-ARPFITH---HNALDIDLYLRIATELNLKRLIVGGLDRVYEMGRIFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A   Y  LM+    I+R AA+                      
Sbjct: 265 GMDVRHNPEFTTIEIYQAFADYRDLMEITEGIVRHAAKSVLGTTQIAYQGVNIDLDNVRT 324

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I++ ++  +    D  +                A+  G+          I +    EK+E
Sbjct: 325 ISMNDSVRQATGKDFLSCQTV------DEARAMARAIGVPFEERYGIGGILNAAFEEKVE 378

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA   P DPR T RFE +    EL N   EL DPI+Q  R
Sbjct: 379 ET--LMQPTFITGHPTEISPLAKRNPDDPRITDRFEFFVYGRELANGFTELNDPIDQEQR 436

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F +++++++    E + +D D++  L   +P + G+ +G DRLVML+T + +I +V+  P
Sbjct: 437 FLEQLEQRQAGDAEAHVMDRDYITALEYGLPPTGGLGIGVDRLVMLLTDSPSIRDVLLFP 496

Query: 347 FSQS 350
             + 
Sbjct: 497 TMKP 500


>gi|224437803|ref|ZP_03658750.1| lysyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144250|ref|ZP_07806443.1| lysyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129281|gb|EFR46898.1| lysyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 526

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 162/364 (44%), Gaps = 26/364 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R                R+ I S +R++F +  F+E+++  L
Sbjct: 149 PLPEKFHGLSDIELRYRQRYVDLIVNENVKETFKLRSKIISCVRQFFEKKGFLEVETPML 208

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E IF     +RN   
Sbjct: 209 HPIPGGA-NARPFITH---HNALDVERYLRIAPELYLKRLIVGGFEAIFELNRNFRNEGM 264

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEF+M+E+Y A+++YE L+     +     E          N     FS+ + ++
Sbjct: 265 DHSHNPEFSMIEFYWAYKTYEDLITLTQELFTYLLEELKLPKILKHNDTEIDFSKWQILS 324

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             EA      +D           ++ LL    Q+  +++    ++  +      E +E  
Sbjct: 325 YKEALESIGGLD------KHIIENKELLLQTLQERHLKIDSSFSYGKLLGEAFDEFVESK 378

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA     +     RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 379 --LINPTFITQYPIDISPLARRNDENLEIADRFELFIGGKEIANGFSELNDPLDQLERFK 436

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++++ K     E   +DED++  L   MP ++G  +G DRLVML++ A +I +VI  P  
Sbjct: 437 EQVKAKDAGDEEAQYMDEDYVWALAHGMPPTAGEGIGIDRLVMLLSDAKSIKDVILFPAL 496

Query: 349 QSNQ 352
           + ++
Sbjct: 497 KPSK 500


>gi|171322227|ref|ZP_02911073.1| lysyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171092452|gb|EDT37798.1| lysyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 508

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++     F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTRTIASIRKFMDNADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAQPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V+     +     + +   
Sbjct: 325 RLTITQAIQKYA-----PQYTDGQLSDDAFLRTELKRFGVDVSQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAESQLWEPTYIIDYPVEVSPLARASDTAPGITERFELFMTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFKKQVEQKDAGDEEAMFFDADYIRALEHGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|56479345|ref|YP_160934.1| lysyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81356212|sp|Q5NY31|SYK_AZOSE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|56315388|emb|CAI10033.1| Lysyl-tRNA synthetase (class II) [Aromatoleum aromaticum EbN1]
          Length = 502

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ +  S+R Y V + F+E+++ 
Sbjct: 148 LRPLPDKFHGLTDVEQKYRQRHLDLIMNEQTRFTFVARSRMVQSIRNYMVSHGFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F+T     + +   L+L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 208 MMHPIPGGAA-AKPFTTH---HNALDMELFLRIAPELYLKRLVVGGFEKVFEVNRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y+ LM     ++R AA      ++F +Q    +      
Sbjct: 264 GLSPRHNPEFTMMEFYEAYANYKSLMNFTEGLLRQAAREALGTEVFVYQGRELDLSKPFA 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  ++               D   L  +      ++  D     +   +  E  
Sbjct: 324 RLTIVEAIHQF-----HPGFSIAQLNDEAWLRAKLTDLKAKLRDDAGLGTLQLMLFEETT 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA    A+P  T+RFEL+    E+ N   EL DP +Q  
Sbjct: 379 EAE--LWEPTFIIDYPAEVSPLARRNDANPEITERFELFIVGREIANGFSELNDPEDQAA 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++ K+    E    D D++  L   +P + G  +G DRLVML+T + +I +VI  
Sbjct: 437 RFLEQVKAKEAGDEEAMFYDADYIRALEYGLPPTGGCGIGIDRLVMLLTDSPSIRDVILF 496

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 497 PQMRTE 502


>gi|257871360|ref|ZP_05651013.1| lysyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805524|gb|EEV34346.1| lysyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 497

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 103/364 (28%), Positives = 170/364 (46%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   + +IE+++ 
Sbjct: 146 LRPLPDKYHGLTNIEQRYRQRYLDLISNKDSFDRFMKRSQIISEIRRYLDGHGYIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 206 VLHNQAGGAA-ARPFITH---HNALDIDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  ++ +M     IIR AA +V +  + ++     +  S+  
Sbjct: 262 GIDTTHNPEFTMLEAYTAYTDFKDVMDLTEGIIRNAAEKVLDSAVITYDGQEVDLASDFA 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +   +D    +           +  A++  + V    T   + +      +
Sbjct: 322 RVHMVDAIKQQTGVDFWKEMTI------EEAHALAKEHQVEVTPTMTVGHVINEFFETFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EET--LQQPTFVYGHPVEVSPLAKKNPKDPRFTDRFELFIVGREFANAFTELNDPIDQRQ 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +E+++  +E + +DEDFL  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEAQEKERQEGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 493

Query: 346 PFSQ 349
           P  +
Sbjct: 494 PTMR 497


>gi|198434726|ref|XP_002131983.1| PREDICTED: similar to lysyl-tRNA synthetase [Ciona intestinalis]
          Length = 576

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 89/375 (23%), Positives = 160/375 (42%), Gaps = 28/375 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R  I S +R +F +  F+E+++ 
Sbjct: 197 LHMLPHLHFGLKDKETRYRQRYLDLIMNDQTRQKFITRAKIISYIRSFFDQMGFLEVETP 256

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 257 MMNMVAGGAT-AKPFITH---HNDLDMDLYMRVAPELYLKMLVVGGLDRVYEIGRLFRNE 312

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  YE LMK    +I    +          +           
Sbjct: 313 GIDMTHNPEFTSCEFYMAYADYEDLMKISETLISGMVKQICGSYKLTYHPDGPDSEGYEV 372

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       + +     R   ++     +      +  L     + G+      T + +  
Sbjct: 373 DYTPPFRRLRMLPDLERLTGMEFPKPTELHTAGAQARLDEICVKLGVECPPPRTTARLLD 432

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ + +E N      T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 433 KLVGDYLEVNC--INPTFITEHPEIMSPLAKWHRSIKGLTERFELFVNKKEICNAYTELN 490

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 491 DPMIQRQRFEQQALDKAAGDDEAQMVDENFCTALEYGLPPTGGWGMGIDRLTMFLTDSNN 550

Query: 339 INEVIWTPFSQSNQE 353
           I EV+  P  + + +
Sbjct: 551 IKEVLLFPAMKPDDQ 565


>gi|284048762|ref|YP_003399101.1| lysyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952983|gb|ADB47786.1| lysyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 664

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 163/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR  I   +R+   +  ++E+++ 
Sbjct: 151 LKPLPEKWHGLKDKEIRYRQRYVDLIVNPEVRDVFVKRTQIIKCIRQVLDDQGYLEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F T     + +   LYL+ + E + K+L+  G E+++     +RN 
Sbjct: 211 VLNTISGGAT-ARPFITH---HNALDIDLYLRIATELNLKRLVVGGLERVYELGRVFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y A   +  +M     I+   A +V       ++    +      
Sbjct: 267 GMDIKHNPEFTTLECYEAFGDFNTMMDLTEKIVTTCAEKVLGTLKIQYEGTEIDLTGPWP 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y+  D           D       A++AG+ V        I +    E +
Sbjct: 327 RMTMIDAVKKYSGKDFTGV------KDVETARQLAREAGVAVEPAWGVGKIINAFFDEFV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +     +  +P   S LA    ADP  T RFE Y    ELCN   EL DP++Q+ 
Sbjct: 381 EKN--LIQPIFITGHPKEISPLAKSSAADPEITDRFEGYIFGRELCNGFTELNDPLDQKE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFEK+++E+    +E   +DEDF+  L   +P + G+ +G DRLVM +TGA +I +V+  
Sbjct: 439 RFEKQVEERNAGDDEAGMMDEDFINALMHGLPPTGGLGIGIDRLVMFLTGAVSIRDVLLF 498

Query: 346 PFSQS 350
           P  + 
Sbjct: 499 PTMKP 503


>gi|331089813|ref|ZP_08338706.1| hypothetical protein HMPREF1025_02289 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330403510|gb|EGG83068.1| hypothetical protein HMPREF1025_02289 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 642

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 159/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I S++R Y     F+E+++ 
Sbjct: 142 LQILPEKFHGLTNTDMRYRQRYVDLIMNPEAKDTFIKRSKIISAIRRYLDGEGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + L L+ S E   K+L+  G E+++     +RN 
Sbjct: 202 MLVANAGGAA-ARPFETHF---NALNEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V       +  V  +     E
Sbjct: 258 GLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTTKIVYNGVEMDLGKPFE 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D        +          A +  +         DI S    E  
Sbjct: 318 RITMVDAVKKYAGVDWN------EVKTLEEARKLADEHHVEYEEHHKKGDILSLFFEEFA 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFE +    E+ NA  EL DPI+QR 
Sbjct: 372 EEH--LIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDFL  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 430 RFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLF 489

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 490 PTMKTQ 495


>gi|320528945|ref|ZP_08030037.1| lysyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138575|gb|EFW30465.1| lysyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 503

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 152/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR  I  S+R Y  E  F+E+++ 
Sbjct: 149 LRPLPEKFHGLKDVDTRYRQRYLDLMVNYEVRDTFRKRAKIIRSIRSYLDERDFLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E S K+L+  G ++++     +RN 
Sbjct: 209 VLSTIAGGAA-ARPFITH---HNALDIDLYLRIATELSLKRLIVGGLDRVYEMGRIFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A   Y  LM+    I+R  AE                      
Sbjct: 265 GMDVRHNPEFTSIEIYQAFGDYRDLMEITEGIVRRTAEDVLGTTKITYQGVEIDLGTVRT 324

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +++ +A       D  +                A++ G+          I +    EK+E
Sbjct: 325 VSMNDAVCEATGRDFLSC------TTVDEARAMAKEIGVPFEERHGIGGILNAAFEEKVE 378

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA   P DPR T RFE +    EL N   EL DPI+Q  R
Sbjct: 379 ET--LIQPTFITGHPTEISPLAKRNPDDPRITDRFEFFVYGRELANGFTELNDPIDQEQR 436

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++ +++    E + +D D++  L   +P + G+ +G DRLVML+T + +I +V+  P
Sbjct: 437 FIDQLAQREAGDAEAHVMDRDYVTALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 496

Query: 347 FSQS 350
             + 
Sbjct: 497 TMKP 500


>gi|307261289|ref|ZP_07542964.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306869020|gb|EFN00822.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 500

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     +++  YR+R              + R+ + S +R++F+E  FIE+++ 
Sbjct: 146 LRPLPNKVQGLTDQETRYRQRYLDLISNEESRRTFMIRSKVVSGIRQFFLEKDFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-AKPFITH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++       +     +     E
Sbjct: 262 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLAIDILGTTTVPYGEYVFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y N      +   D          A+  GI +        + + I  E  
Sbjct: 322 RITMHDAIVKYGN-----GITREDLDSFEKSVEIAKGLGIEIQKSWGLGSVVNAIFEEVA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 377 EHQ--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DEDF+  L   +P ++G  +G DRL M+   A +I +VI  
Sbjct: 435 RFDAQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PAMR 498


>gi|113955017|ref|YP_729353.1| lysyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123132786|sp|Q0IDW9|SYK_SYNS3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|113882368|gb|ABI47326.1| lysyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 489

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 156/367 (42%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R M  S++R +  E  F+EI++ 
Sbjct: 134 LQPLPDKWHGLADVEKRYRQRYLDLIVTPQSRETFRRRAMAVSAIRRWLDERDFLEIETP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+L+  G E+++     +RN 
Sbjct: 194 VLQSEAGGA-EARPFITH---HNTLDLPLYLRIATELHLKRLVVGGFERVYELGRIFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +I     +V      S+Q V  +      
Sbjct: 250 GVSTRHNPEFTSVEVYQAYADYNDMMTLTEQLIASVCEQVCGTTRISYQGVEVDLTPSWR 309

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
             T+ E       +D  +         R       + A +      DT   + +      
Sbjct: 310 RATMHELVQEATGLDFTSF------ETREAAVEAMRAANLPAPDKADTVGRLLNEAFEHA 363

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EPN  +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL DP++QR
Sbjct: 364 VEPN--LIQPTFVLDYPQEISPLARKHRSKPGLVERFELFIVGRETANAFSELTDPLDQR 421

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E + + +     E   +DEDF+  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 422 GRMELQQERRAAGDVEASGVDEDFIQALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 481

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 482 FPLMRPE 488


>gi|19112684|ref|NP_595892.1| cytoplasmic lysine-tRNA ligase Krs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74626015|sp|Q9UUE6|SYKC_SCHPO RecName: Full=Lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|5738524|emb|CAB52801.1| cytoplasmic lysine-tRNA ligase Krs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 591

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 152/376 (40%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P + +  +D   R              R   + R+ I   +R +F    F+E+++ 
Sbjct: 214 LRMLPKEHYGLKDLEIRHRQRYLDLIMNRSTRDRFVMRSRIIQYIRHFFDSRDFMEVETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 274 MMNMIAGGAT-AKPFVTH---HNDLDMDLYMRIAPELYLKMLVVGGLDRVYEIGRQFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT +E+Y+A+  Y  LM     ++    +          +           
Sbjct: 330 GADLTHNPEFTSIEFYQAYADYYDLMDTTEELLSGLVKDLTGSYKVPYHPEGPEGPKWEL 389

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + E      N                 L     + G+  A   T S +  
Sbjct: 390 DFSRPWRRINMIEYLEEKLNTKFPPGDQLHTPEANAFLRDLCAKHGVECAPPQTCSRLLD 449

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + +D    +RFE +    E+CNA  EL 
Sbjct: 450 KLVGEFIESEC--INPTFIIGHPQMMSPLAKYHRSDAGLCERFEAFVATKEICNAYTELN 507

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           D  +QR RFE++ ++K +  +E   IDE+F   L   +P + G  MG DRLVM +T +N 
Sbjct: 508 DIFDQRARFEEQARQKAQGDDEAQIIDENFCTALEYGLPPTGGWGMGVDRLVMFLTDSNT 567

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   + 
Sbjct: 568 IREVLLFPHMKPEVQA 583


>gi|327306760|ref|XP_003238071.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326458327|gb|EGD83780.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 609

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 92/375 (24%), Positives = 161/375 (42%), Gaps = 26/375 (6%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  +D   R              R   + R+ I S +R YF E  F+E+++ 
Sbjct: 217 LHQIPSEHYGLKDQEQRFRQRYLDLIMNDSSRNVFVTRSKIVSYIRRYFDERDFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNAIAGGAT-AKPFITH---HNELNMNLFMRIAPELYLKMLIVGGLERVYEMGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     LM    +++    +       +  +       N N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDLMNVTEDLVSGLVKHVTGGYETVFHTQSGEQYNVNW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                 +     L    ++  +      T + +  ++
Sbjct: 393 KAPWKKIEMIPALEEATGEKFPPGDQLHTEETNGFLKRVLKKVNVECTPPLTNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        + +  +P   S LA  +   P   +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEEKC--INPSFIIGHPQMMSPLAKYHRDHPGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K++  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQARQKEQGDDEAQMIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQEEI 355
           EV+  PF + ++  +
Sbjct: 571 EVLAFPFMKEDKTAV 585


>gi|194272210|ref|NP_001123561.1| lysyl-tRNA synthetase isoform 1 [Homo sapiens]
 gi|119616028|gb|EAW95622.1| lysyl-tRNA synthetase, isoform CRA_d [Homo sapiens]
 gi|119616030|gb|EAW95624.1| lysyl-tRNA synthetase, isoform CRA_d [Homo sapiens]
          Length = 625

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 238 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 297

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 298 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 353

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +         + 
Sbjct: 354 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDV 413

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + E   +   + L  T     +  R +L        +      T + +  
Sbjct: 414 DFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 473

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 474 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 531

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 532 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 591

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 592 IKEVLLFPAMKPEDKK 607


>gi|315165840|gb|EFU09857.1| lysyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 498

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N ++E+++ 
Sbjct: 147 LRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDMDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ +M     IIR AA +V       +     +  S  +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDIKYDGQAVDLGSPFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +   +          A++  + +    T   I +      +
Sbjct: 323 RLHMVDAVKEQTGVDFWQEMTIEE------ARALAKEHNVEITDAMTVGHIINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EDT--LQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRD 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ +E+++  +E + +DEDF+  L   +P + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PTMR 498


>gi|54307775|ref|YP_128795.1| lysyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81400152|sp|Q6LUN2|SYK_PHOPR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|46912198|emb|CAG18993.1| putative lysyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 502

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 160/370 (43%), Gaps = 22/370 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R             ++ R+ + S++R + ++  F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRNTMIMRSKVVSAIRNFMMKKDFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHVIPGGAT-ARPFITH---HNALDIDMYLRVAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     ++   A ++       + +   +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIATDLHGSPKLPYGDAIVDFGGPYP 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++  A  +Y   +     L      DR L+   A+   I V    T   +   I  E 
Sbjct: 315 RISMLNAIKQYNPDNAEIQALTYEQVADRELMANIARGLDIYVEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPQ--LMQPTFITEYPADISPLARRNDTNDFITDRFEFFIGGREVANGFSELNDAQDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 QRFKAQVNAKDAGDDEAMYYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSNQEE 354
            P  +   + 
Sbjct: 493 FPALRPQNKA 502


>gi|239615657|gb|EEQ92644.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327353948|gb|EGE82805.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 609

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 89/372 (23%), Positives = 156/372 (41%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  RD    YR+R              + R+ + + +R +F E  FIE+++ 
Sbjct: 217 LHQIPSEHYGLRDQEQRYRQRYLDLIMNDKSRNVFITRSKMITYIRRFFDERDFIEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++++ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNTIAGGAT-AKPFVTH---HNDLNMDMFMRIAPELYLKMLIVGGLERVYELGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     ++    +       +  +         N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDIMNVTEELVSGLVKHITGGYETTFHTQTGEEYKINW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                       L    ++  +     +T + +  ++
Sbjct: 393 KAPWKRIEMIPALEEATGEKFPPGDQLHTMETNAFLKKVLKKVNVECTPPETNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +       +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEETC--INPTFITGHPQMMSPLAKYHRDHVGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQASQKAQGDDEAQMIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF +  +
Sbjct: 571 EVLAFPFMKEEK 582


>gi|119193865|ref|XP_001247536.1| lysyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
 gi|303311735|ref|XP_003065879.1| Lysyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240105541|gb|EER23734.1| Lysyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320039790|gb|EFW21724.1| lysyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 609

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 90/372 (24%), Positives = 157/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  +D   R              R   + R+ I S +R YF E  F+E+++ 
Sbjct: 219 LHQIPSEHYGFKDQEQRFRQRYLDLIMNDKSRNVFITRSKIISYIRRYFDERDFVEVETP 278

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 279 MMNAIAGGAT-AKPFITH---HNELDMNLFMRIAPELYLKMLIVGGLERVYELGRQFRNE 334

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     LM     ++    +       +  +         N 
Sbjct: 335 GIDLTHNPEFTTCEFYWAYADVYDLMNVTEELVSGLVKHVTGGYETVFHTQTGEEYKVNW 394

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                 Q     L    ++  +  +   T + +  ++
Sbjct: 395 KAPWKRIEMIPALEEATGEKFPPGDQLHTQETNEWLKKILKKVNVECSPPQTNARMLDKL 454

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        + +  +P   S LA  +       +RFE + C  E+ NA  EL DP
Sbjct: 455 VGEFIEEKC--INPSFITGHPQMMSPLAKYHRDHIGLCERFEAFVCKKEIVNAYTELNDP 512

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   IDE+F   L   +P + G  +G DRLVM +T   +I 
Sbjct: 513 FDQRLRFEEQARQKDQGDDEAQLIDENFCTSLEYGLPPTGGWGLGIDRLVMFLTDNYSIK 572

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 573 EVLAFPFMKDDK 584


>gi|89094634|ref|ZP_01167571.1| lysyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89081104|gb|EAR60339.1| lysyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 500

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 99/376 (26%), Positives = 160/376 (42%), Gaps = 36/376 (9%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R                R+ I S +R Y  E +FIE ++ 
Sbjct: 135 LRPLPDKHKGLQDTEIRYRQRYVDLITNEDSRKVFEMRSKIVSGIRNYLTERRFIEAETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + + + +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 195 MLQVIPGGAT-ARPFITH---HNALDRDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-----------NQKIFSFQN 156
                H PEFTM+E+Y+A+  Y  LM    +++R  A+             N +    + 
Sbjct: 251 GLSTRHNPEFTMIEFYQAYADYRDLMDLTEDMLRTVAQDVLGTTTIVNTVRNDEGEVLET 310

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              +       I+V ++   Y        +      D       AQ+  I V        
Sbjct: 311 FEYDLEKPFRRISVFDSILHY-----NEDITAEALADETAARQIAQRMDIDVKDSWGLGK 365

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +   I  + +E    ++  T +  YPA  S LA     +P  T RFE +    EL N   
Sbjct: 366 VQIEIFEKTVEHR--LDQPTFITEYPAEVSPLARRNDENPFITDRFEFFVGGRELANGFS 423

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL D  +Q  RF++++ EK    +E    D D++  L   +P ++G  +G DRLVML T 
Sbjct: 424 ELNDSEDQAERFQQQVAEKDAGDDEAMHYDADYINALEYGLPPTAGEGIGIDRLVMLFTD 483

Query: 336 ANNINEVIWTPFSQSN 351
           + +I +VI  P  +  
Sbjct: 484 SPSIRDVILFPAMRPR 499


>gi|110834509|ref|YP_693368.1| lysyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110647620|emb|CAL17096.1| Lysyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 504

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 156/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  I + +R + V+  F+E ++ 
Sbjct: 148 LRPLPEKHKGLTDTEARYRQRYVDLIVNEDTRKTFQIRAKIVAGIRNFLVQKDFVEAETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + +   +YL+ +PE   K+L+  G EK+F     +RN 
Sbjct: 208 MLQVIPGGAT-ARPFITH---HNSLDMDMYLRIAPELYLKRLVVGGFEKVFEINRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A   Y  LM     ++R  AE        ++Q    +      
Sbjct: 264 GLSTRHNPEFTMLEFYQAFGDYHDLMNLTEEMLRTLAETVLGSTDVAYQGDVFDFGKPFT 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV ++   +        +D     D       A   GI +        +   I  + +
Sbjct: 324 RMTVFDSILHF-----NPDIDAAKLADIEGAREIATGLGIPLKDGYGLGKVQIEIFEKTV 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T+RFE +    E+ N   EL D  +Q  
Sbjct: 379 EHR--LKDPTFITEYPTEVSPLARRMDDNPFVTERFEFFVGGREIANGFSELNDAEDQAE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++EK    +E    DED++  L   +P ++G  +G DRLVML T A +I +VI  
Sbjct: 437 RFRQQVEEKAAGDDEAMFYDEDYVVALEHGLPPTAGEGIGIDRLVMLFTDAPSIRDVILF 496

Query: 346 PFSQSN 351
           P  +  
Sbjct: 497 PHMRPQ 502


>gi|326430801|gb|EGD76371.1| lysyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 796

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 158/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P Q +   N++  YR+R              + R  I S +R +   N F+E+++ 
Sbjct: 193 LHMLPHQHFGITNKETRYRQRYLDLITNRSVRNNFVVRANIISYVRRFLDMNGFLEVETP 252

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K L+  G ++++     +RN 
Sbjct: 253 MMNMVAGGAT-AKPFITH---HNDLNLDLFLRVAPELYLKMLVVGGFDRVYELGRQFRNE 308

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
           +    H PEFT  E+Y A+  +  LM     +I    +          +           
Sbjct: 309 QIDMTHNPEFTSCEFYMAYADFNDLMVMTEELIAGMVKSIKGTYKVTYHPDGPDGEAQEI 368

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       +++ +                  +  R  L     + G+      T + +  
Sbjct: 369 DFTPPFRRVSLVQGLEEATGRKFPEPRTFHTEETRKWLDDLCTELGVDCPAPRTTARLTD 428

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 429 KLVGEYLESKAV--NPTFIIDHPQVMSPLAKWHRSVPGLTERFELFVSTKEVCNAYTELN 486

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP  QR RFE++ ++K    +E   IDE F+  L   +P ++G  MG DR+ M +T +NN
Sbjct: 487 DPQVQRERFEQQAKDKAMGDDEAQAIDEAFVKALEHGLPPTAGWGMGIDRMTMFLTDSNN 546

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +    E
Sbjct: 547 IKEVLLFPAMKPEDVE 562


>gi|107028702|ref|YP_625797.1| lysyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690139|ref|YP_835762.1| lysyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|170733472|ref|YP_001765419.1| lysyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254247790|ref|ZP_04941111.1| Lysyl-tRNA synthetase (class II) [Burkholderia cenocepacia PC184]
 gi|122977748|sp|Q1BHT1|SYK_BURCA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229795|sp|A0K8P2|SYK_BURCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238688559|sp|B1JUZ7|SYK_BURCC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|105897866|gb|ABF80824.1| lysyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116648228|gb|ABK08869.1| lysyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|124872566|gb|EAY64282.1| Lysyl-tRNA synthetase (class II) [Burkholderia cenocepacia PC184]
 gi|169816714|gb|ACA91297.1| lysyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 508

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++     F+E+++ 
Sbjct: 149 LRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMDNADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V+     +     + +   
Sbjct: 325 RLTITQAIQKYA-----PDYTDGQLSDDAFLRTELKRFGVDVSQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAEAQLWEPTFIIDYPVEVSPLARASDTVPGITERFELFMTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|188997502|ref|YP_001931753.1| lysyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932569|gb|ACD67199.1| lysyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 577

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 154/368 (41%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D  YR              R     R+    SLRE+     FIE+++ 
Sbjct: 222 LRPLPEKWHGLKDTEYRYRYRYLDLIANQRTREIFKIRSKAIKSLREFLESKGFIEVETP 281

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         + F T     + +   LYL+ +PE   K L+  G  ++F     +RN 
Sbjct: 282 ILQPVASGAM-AKPFIT---YHNALDMNLYLRIAPELYLKMLVVGGFNRVFEIGRNFRNE 337

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     + R    +       +++    +      
Sbjct: 338 GIDTTHNPEFTMVEFYAAYLDYNDLMALTEELFRKILLDTVGTLKITWEGQELDFEKPFR 397

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +   +A  +    D    L      D       A++ GI  A   T   I  ++    +
Sbjct: 398 KVAFFDALKQKTGKDKEFFL------DFEKARNFAKEVGIPKADTLTHVKILDKLFEHFV 451

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA  +  DP   +RFEL     EL NA  EL DP++QR 
Sbjct: 452 EE--DLIQPTFVIDFPKILSPLAKTHRNDPDLVERFELIINKKELANAYTELNDPMDQRE 509

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++EK+    E   IDE FL  L   +P ++G  +G DRLVM++T   +I EVI  
Sbjct: 510 RFIQQIREKEMGDEEAMDIDETFLTALEYGLPPTAGEGIGIDRLVMMLTDNYSIREVILF 569

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 570 PTLRPEGQ 577


>gi|237755721|ref|ZP_04584328.1| lysyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692113|gb|EEP61114.1| lysyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 577

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 156/368 (42%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D  YR              R     R+    SLRE+     FIE+++ 
Sbjct: 222 LRPLPEKWHGLKDTEYRYRYRYLDLIANQRTREIFKIRSKAIKSLREFLESKGFIEVETP 281

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         + F T     + +   LYL+ +PE   K L+  G  K+F     +RN 
Sbjct: 282 ILQPVASGAM-AKPFIT---YHNALDMNLYLRIAPELYLKMLVVGGFNKVFEIGRNFRNE 337

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     + R    +       +++    +      
Sbjct: 338 GIDTTHNPEFTMVEFYAAYLDYNDLMVLTEELFRKILLDTVGTLKITWEGQELDFEKPFR 397

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++  +A  +    D    L      D       A++ GI  A   T + I  ++    +
Sbjct: 398 KVSFFDALKQKTGKDKEFFL------DFEKARNFAKEVGIPKADTLTHAKILDKLFEHFV 451

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA  + + P   +RFEL     EL NA  EL DP++QR 
Sbjct: 452 EE--DLVQPTFVIDFPKILSPLAKTHRSYPDLVERFELIINKKELANAYTELNDPMDQRE 509

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++EK+    E   +DE FL  L   +P ++G  +G DRLVM++T   +I EVI  
Sbjct: 510 RFIQQIREKEMGDEEAMDVDETFLTALEYGLPPTAGEGIGIDRLVMMLTDNYSIREVILF 569

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 570 PTLRPEGQ 577


>gi|32267165|ref|NP_861197.1| lysyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|39932098|sp|Q7VFL0|SYK_HELHP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|32263218|gb|AAP78263.1| lysyl-tRNA synthetases [Helicobacter hepaticus ATCC 51449]
          Length = 518

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 156/364 (42%), Gaps = 26/364 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R                R+ I S +R++F +  F+E+++  L
Sbjct: 146 PLPEKFHGLNDIELRYRQRYVDLIVNNKVKETFKLRSQIVSCIRQFFEQKGFLEVETPML 205

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E IF     +RN   
Sbjct: 206 HSIPGGA-NARPFITH---HNALDVDRYLRIAPELYLKRLIVGGFEAIFELNRNFRNEGM 261

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEF+M+E+Y A+++YE L+     +     +  N       +     FS+   I 
Sbjct: 262 DHSHNPEFSMIEFYWAYKTYEDLITLTQELFAFLFKKLNLPHSLIHDELEIDFSQWHIIG 321

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             EA  +   +D     +         L        ++V    ++  +      E +E  
Sbjct: 322 YKEALIKIGGLDKNIIDNQ------DALLSFLMSKHLKVDKSMSYGKLLGEAFDEFVEHK 375

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA     +P    RFEL+    E+ N   EL DPI+Q  RF+
Sbjct: 376 --LINPTFITQYPIEISPLARRNDENPNVADRFELFIGGKEIANGFSELNDPIDQFERFK 433

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++ + K     E   +DED++  L   MP ++G  +G DRLVML++ A  I +VI  P  
Sbjct: 434 EQAKAKDAGDEEAQYMDEDYVWALAHGMPPTAGEGIGIDRLVMLLSNAKTIKDVILFPAL 493

Query: 349 QSNQ 352
           +  +
Sbjct: 494 KPTK 497


>gi|254977178|ref|ZP_05273650.1| lysyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255094508|ref|ZP_05323986.1| lysyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255102764|ref|ZP_05331741.1| lysyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255308585|ref|ZP_05352756.1| lysyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255316259|ref|ZP_05357842.1| lysyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518920|ref|ZP_05386596.1| lysyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255652099|ref|ZP_05399001.1| lysyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260685072|ref|YP_003216357.1| lysyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260688730|ref|YP_003219864.1| lysyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306521833|ref|ZP_07408180.1| lysyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|260211235|emb|CBA66755.1| lysyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260214747|emb|CBE07437.1| lysyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 509

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 171/365 (46%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              L R     +LR Y  +  F+E+++ 
Sbjct: 146 LQVLPEKYHGLKDQELRYRQRYVDLIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +  P+YL+ + E   K+L+  G +K++     +RN 
Sbjct: 206 ILNTIAGGA-NARPFIT---NHNTLHIPMYLRIANELYLKRLIVGGFDKVYEMGRMFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPE 166
                H PE+T +E Y+A+  Y  +M+   N+I   AEVA   +  ++Q    N     +
Sbjct: 262 GMDLKHNPEYTAIELYQAYADYTDMMEITENVIAHMAEVATGSMIVNYQGTEINFTPPWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +    Y+ +D  T   + +  +       A++ GI +       ++ +    E  
Sbjct: 322 RMSMEDCVKEYSGVDFSTINTDEEALE------VAREKGIEIKPGMRRGEVINAFFEEFG 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L+     DPR T RFE +A   EL NA  EL DPI+Q+ 
Sbjct: 376 EDK--LIQPTFITHHPVEVSPLSKRNVEDPRRTDRFEAFANKWELANAFSELNDPIDQKG 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++++++   +E + +DEDFL  L   +P + G+ +G DR++ML+T + +I +V+  
Sbjct: 434 RFIDQLRKRELGDDEAFEMDEDFLKALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLF 493

Query: 346 PFSQS 350
           P  + 
Sbjct: 494 PTMKP 498


>gi|290476398|ref|YP_003469303.1| lysine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289175736|emb|CBJ82539.1| lysine tRNA synthetase, constitutive [Xenorhabdus bovienii SS-2004]
          Length = 504

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 164/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I ++LR + V+  F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQEMRYRQRYLDLISNDESRKTFQIRSRIMAALRNFMVKKDFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F+T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MMQAIPGGAS-ARPFTTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+     + R    EV    +  +     +      
Sbjct: 265 GISPRHNPEFTMMELYMAYADYQDLIVLTEELFRTLTQEVLGTTLVKYGEQEFDFGKPFT 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA  +Y         +  D  D       A+  GI +        I   I  E  
Sbjct: 325 KMSMKEAICKY-----RPETNIADLDDMDKAVAIAKSLGIDIEKSWGLGRIQCEIFEETA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 380 ESH--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++ K +  +E    D+D++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 438 RFAEQVRHKDEGDDEAMFYDDDYVTALEHGLPPTAGLGIGIDRMVMLFTDSHTIRDVILF 497

Query: 346 PFSQSNQ 352
           P  + N+
Sbjct: 498 PAMRPNK 504


>gi|225016227|ref|ZP_03705419.1| hypothetical protein CLOSTMETH_00130 [Clostridium methylpentosum
           DSM 5476]
 gi|224950985|gb|EEG32194.1| hypothetical protein CLOSTMETH_00130 [Clostridium methylpentosum
           DSM 5476]
          Length = 502

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 160/360 (44%), Gaps = 27/360 (7%)

Query: 6   SQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +    RD    YR+R              +KR+ I + +R +     F+E+++  L   
Sbjct: 150 EKWHGLRDTDTRYRQRYVDLIVNPDVKDTFVKRSRIITEIRRFLDGEGFLEVETPVLHNI 209

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
            G  +  R F T     + +   +Y++ + E   K+L+  G ++++     +RN      
Sbjct: 210 AGGAS-ARPFITH---HNALNIDMYMRIALELHLKRLIVGGFDRVYEIGRVFRNEGTDTK 265

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYITVA 171
           H PEFT+LE Y+A+  YE +M     +I+  A+ V       +     +       IT+ 
Sbjct: 266 HNPEFTLLELYQAYTDYEGMMDITERMIKTVAQNVLGTTTVQYGEHEIDLGKPFTRITMT 325

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +A  +Y+ +D                   A++  I         DI +    E +E    
Sbjct: 326 DAVKQYSGVDFSQI------ETLEEARAIAKEHHIEFEDRHLKGDILNLFFDEYVEDK-- 377

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   T +  YP   S LA   P+DP  T+RFEL+    E  NA  EL DPI+Q+ RFE +
Sbjct: 378 LIQPTFITDYPVEISPLAKRKPSDPTMTERFELFILGREHANAFSELNDPIDQKGRFEHQ 437

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ KK   +E   +D D++  L   MP + G+ +G DRLVML+T  + I +V+  P  + 
Sbjct: 438 VELKKAGDDEAADMDTDYITALEYGMPPTGGLGIGIDRLVMLLTNNDCIRDVLLFPTMKP 497


>gi|311107123|ref|YP_003979976.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310761812|gb|ADP17261.1| lysyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 507

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 148/368 (40%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+    S+R++ +   F+E+++ 
Sbjct: 148 LRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKAVGSIRQFMLNAGFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 208 MLHPIPGGAA-AKPFVTH---HNALDMEMYLRIAPELYLKRLIVGGFERVFEVNRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A   Y  LM     +IR AA       + ++     +     +
Sbjct: 264 GVSPRHNPEFTMMEFYAAFAEYRWLMDFTEELIRQAAISATGSAVLTYGERELDLSKPFD 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +YA              D   +  + ++ G               + +   
Sbjct: 324 RLTICEAILKYA-----PGYTQAQLDDAAFVRAELKKLGADADGPVLSRAGLGALQLALF 378

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 379 EETAEAKLWNPTYIIDYPVEVSPLARASDTREGITERFELFMTGREIANGFSELNDPEDQ 438

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  +++ K     E    D D++  L   MP + G  +G DRLVML+T + +I +VI
Sbjct: 439 AERFRSQVEAKDAGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVI 498

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 499 LFPHLRRE 506


>gi|119616027|gb|EAW95621.1| lysyl-tRNA synthetase, isoform CRA_c [Homo sapiens]
          Length = 634

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 247 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 306

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 307 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 362

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +         + 
Sbjct: 363 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDV 422

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + E   +   + L  T     +  R +L        +      T + +  
Sbjct: 423 DFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 482

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 483 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 540

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 541 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 600

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 601 IKEVLLFPAMKPEDKK 616


>gi|34496515|ref|NP_900730.1| lysyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|39932059|sp|Q7NZ62|SYK_CHRVO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|34102369|gb|AAQ58735.1| lysyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 502

 Score =  332 bits (851), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 90/366 (24%), Positives = 160/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I   +R+  V   ++E+++ 
Sbjct: 148 IRPLPEKFHGIADQETKYRQRYADLIMSEESRETFIKRSKIVQKVRDVMVGEGYLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  + F T     + +  PLYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 208 MMHPIPGGAS-AKPFVTH---HNALDMPLYLRIAPELYLKRLVVGGLERVFEINRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+++M+    IIR  A         ++Q    +     +
Sbjct: 264 GMSTRHNPEFTMIEFYEAYSDYQRMMEMTETIIRECALVACGSTTVTYQGKEVDLGKPFD 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ +A   Y          +    D   +  + ++ G ++        +   +  E  
Sbjct: 324 RFTIVQAIKHY-----NPQYTDAQLSDAAWVASEIKRLGGKLPPAPGLGSLQLALFEECA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA      P  T+RFEL+    E  N   EL DP +Q  
Sbjct: 379 ES--LLWNPTFIIDYPVEVSPLARGSDTQPGLTERFELFIVGREHANGYSELNDPEDQAA 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T A +I +VI  
Sbjct: 437 RFQAQVAQKDAGDDEAMHYDADYIRAMEYGLPPTGGCGIGIDRLVMLLTDAPSIRDVILF 496

Query: 346 PFSQSN 351
           P  +  
Sbjct: 497 PHMRPE 502


>gi|298372519|ref|ZP_06982509.1| lysine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275423|gb|EFI16974.1| lysine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 567

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 104/377 (27%), Positives = 169/377 (44%), Gaps = 35/377 (9%)

Query: 1   MHQIPSQPWWN---------RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P   + +          +  YR+R              +KR  I  S+REYF    
Sbjct: 141 IRPLPIVKYKDNEAFDAFDDPEQRYRQRYVDLVVNDGIKDIFVKRTNIYRSMREYFDSQN 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           +IE+++  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G E ++ F
Sbjct: 201 YIEVETPILQPIPGGAA-ARPFITH---HNALDIPLYLRIANELYLKRLIVGGFEGVYEF 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNC 159
           +  +RN      H PEFT +E Y A++ Y  +M+    ++     +V         +   
Sbjct: 257 SKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMEFTEKMVEKICLDVNGTTELKVGDNII 316

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +  + +T+ +A   +   DL              +   AQ+  I V        +  
Sbjct: 317 SFKTPFKRVTMLDAIKEHTGYDLTG-------KTEEQIRQIAQKLNIEVNDTMGKGKLID 369

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  EK E +      T +  YP   S L+  + ++P  T+RFEL     EL NA  EL 
Sbjct: 370 EIFGEKCEGSY--IQPTFITDYPIEMSPLSKRHRSNPELTERFELMVNGKELANAYSELN 427

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++++  +K  +E   ID DF+  L   MP +SG+ +G DRLVML+TG   
Sbjct: 428 DPIDQLERFQEQLRLSEKGDDEAMFIDMDFVRALEYGMPPTSGMGIGMDRLVMLMTGQAA 487

Query: 339 INEVIWTPFSQSNQEEI 355
           I EV+  P  +  ++ I
Sbjct: 488 IQEVLLFPQMKPEKKPI 504


>gi|283955824|ref|ZP_06373315.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792779|gb|EFC31557.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 501

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 158/368 (42%), Gaps = 27/368 (7%)

Query: 3   QIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R              L R+ + S +R +F    F+E+++  +
Sbjct: 142 PLPEKYHGLTDIEQRYRKRYVDMIMNAEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMM 201

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN   
Sbjct: 202 HPIAGGA-NAKPFVT---FHNSLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGM 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A+ +Y+ LM     +     +  N  K   F     +     E I
Sbjct: 258 DLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLDKLNLGKTIEFDGKMIDFSKPFERI 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T  +A  +Y  +D           D+  +  + +  G           + + +    +E 
Sbjct: 318 TYKDALCKYGGLDRD------LIEDKEKILTKLKADGFEANEKLELGHLQAELFDNYVEE 371

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L+     D +  +RFEL+ C  EL N  +EL DP++Q  RF
Sbjct: 372 K--LINPTFVIDFPISISPLSRRSDEDSQIAERFELFICGRELANGFNELNDPLDQYERF 429

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+++ K     E   +DEDF+  L   MP ++G  +G DRLVML+T   +I +VI  P 
Sbjct: 430 LKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPA 489

Query: 348 SQSNQEEI 355
            +  + E+
Sbjct: 490 MRPLKSEL 497


>gi|206560552|ref|YP_002231317.1| lysyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693118|sp|B4EDB2|SYK_BURCJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|198036594|emb|CAR52491.1| lysyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 508

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++     F+E+++ 
Sbjct: 149 LRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMDNADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V+     +     + +   
Sbjct: 325 RLTITQAIQKYA-----PDYTDGQLSDDAFLRTELKRFGVDVSQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAEAQLWEPTFIIDYPVEVSPLARASDTVPGITERFELFMTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|312869848|ref|ZP_07729989.1| lysine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094627|gb|EFQ52930.1| lysine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 498

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 100/368 (27%), Positives = 168/368 (45%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     + +  YR+R               +R  I  ++R+Y  ++ F E+++ 
Sbjct: 139 LRPLPNKWEGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRKYMDDHGFTEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   +YL+ + E   K+L+  G E+++     +RN 
Sbjct: 199 ILNTQAGGA-NARPFVTH---HNALDIDMYLRIATELYLKRLIVGGFERVYELGRIFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  ++ +M +   I++ AA+V +     ++Q    +   + +
Sbjct: 255 GMDPHHNPEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDGKITYQGREIDLGGDFK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A      ID G      D          A+   I      T   I +    E +
Sbjct: 315 RITMVDAVKEKTGIDFGDESMTDDDA-----KKLAEDHKIEFKPYWTKGHILNAFFEEYV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFELY    EL NA  EL DPI+Q+ 
Sbjct: 370 EDT--LIQPTFVYEYPVEVSPLAKRNKENPAMTDRFELYVDGSELGNAFSELNDPIDQKE 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +E+    +E  P+D D++  L   MP + G+ +G DRLVML+T A +I +VI  
Sbjct: 428 RFEMQAKERANGNDEAEPVDLDYVQALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILF 487

Query: 346 PFSQSNQE 353
           P  +  +E
Sbjct: 488 PTMRPEKE 495


>gi|310829432|ref|YP_003961789.1| hypothetical protein ELI_3882 [Eubacterium limosum KIST612]
 gi|308741166|gb|ADO38826.1| hypothetical protein ELI_3882 [Eubacterium limosum KIST612]
          Length = 488

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 168/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +RE+     FIE+++ 
Sbjct: 133 LQILPEKYHGLKDTELRYRQRYVDLIVNPEVKNVFILRSQIIRKIREFLDNRGFIEVETP 192

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +  PLY++ + E   K+L+  G +K++  +  +RN 
Sbjct: 193 VLYNLAGGA-NARPFVTH---HNALDIPLYMRIALELPLKRLIVGGFDKVYELSRVFRNE 248

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y A+  Y+ +M     +    A E+       ++  + +  +  +
Sbjct: 249 GMDATHNPEFTLLETYEAYADYDDVMNMVEALYGFLAKEILGTDTVEYEGHDISLAAPFK 308

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +    +  ++           D       A++  + V    +  +I + +  E +
Sbjct: 309 RARMVDLVEEHTGVNFDVM------TDLAEAQEAAKKLHVDVEDKHSIGEIIAEVFDEYV 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L+   P DPR+T+RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 363 EDK--LIQPTFVTMHPVEISPLSKREPTDPRYTQRFELFINGAECANAFSELNDPIDQKG 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++Q+K    +E +P D DF+  L   +P + G+ +G DRLVML TG ++I +VI  
Sbjct: 421 RFEAQVQKKADGDDEAHPYDADFINALEVGLPPTGGLGIGIDRLVMLFTGQHSIRDVILF 480

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 481 PTMKPLDD 488


>gi|261855043|ref|YP_003262326.1| lysyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261835512|gb|ACX95279.1| lysyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 511

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 154/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R               KR  I   +R Y     F+E+++ 
Sbjct: 157 LRPLPDKFHGMSDTEQRYRQRYVDLIMNEPVRDTFRKRTQIIQFMRNYLNAKDFLEVETP 216

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  + F+T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 217 MMHVIPGGAS-AKPFTT---FHNALDMDLYLRIAPELYLKRLVVGGFERVYEINRNFRNE 272

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM    +++R  +  V      ++Q V  +      
Sbjct: 273 GLSTRHNPEFTMIEFYQAYADYIDLMDMTEDLLRRLSESVCGSTTLTYQGVEFDLAQPFA 332

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V       A ++    +      D       A+  GI +        I   I  E  
Sbjct: 333 RLSVVN-----AILEHNPDVTREQLSDIDSARRIAEGLGINIKDSYGLGKIQIEIFEETA 387

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 388 EHK--LIQPTFITEYPAEVSPLARRSDDNPFVTDRFEFFIGGREIANGFSELNDAEDQAE 445

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ EK    +E    D D++  L   MP ++G  +G DRLVM +T + +I +V+  
Sbjct: 446 RFMAQVAEKDAGDDEAMHFDSDYIRALEHGMPPTAGEGIGIDRLVMFLTDSPSIRDVLLF 505

Query: 346 PFSQSN 351
           P  +  
Sbjct: 506 PHMRPE 511


>gi|163786312|ref|ZP_02180760.1| lysyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159878172|gb|EDP72228.1| lysyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 562

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 98/378 (25%), Positives = 170/378 (44%), Gaps = 36/378 (9%)

Query: 1   MHQIPSQP---------WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  + +++R++F +  
Sbjct: 136 LKPLPIPKQKDGVTYDAFTDPEQRYRQRYADLAVNPHVKEVFIKRTKLFNAMRQFFNDAG 195

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ  PG     R F T     + +  PLY++ + E   K+L+  G + ++ F
Sbjct: 196 YFEVETPILQPIPGGAA-ARPFITH---HNSLDIPLYMRIANELYLKRLIVGGFDGVYEF 251

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNC 159
           +  +RN      H PEFT +E Y +++ Y  +M  C  ++   A   N     +F     
Sbjct: 252 SKNFRNEGMDRTHNPEFTAMEIYVSYKDYNWMMDFCEQLLEHCAIAVNGTSEATFGEHKI 311

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           N  +  + IT+ ++   +   D+              +   A+   I V        +  
Sbjct: 312 NFKAPYKRITMRDSILEFTGFDIYN-------KSEDEIRAAARGMHIEVDETMGKGKLID 364

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL 
Sbjct: 365 EIFGEKCEGNY--IQPTFITDYPKEMSPLCKEHRENPELTERFELMVCGKEIANAYSELN 422

Query: 280 DPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
           DPI+QR RFE +++  +K  +E    ID DFL  L   MP +SG+ +G DRL+M +T   
Sbjct: 423 DPIDQRERFEHQLKLAQKGDDEATEFIDHDFLRALEYGMPPTSGMGIGMDRLIMFLTNNQ 482

Query: 338 NINEVIWTPFSQSNQEEI 355
           +I EV++ P  +  ++++
Sbjct: 483 SIQEVLFFPQMRPEKKKV 500


>gi|77735669|ref|NP_001029528.1| lysyl-tRNA synthetase [Bos taurus]
 gi|74354788|gb|AAI02323.1| Lysyl-tRNA synthetase [Bos taurus]
          Length = 623

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 158/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 236 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 295

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 296 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 351

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +           
Sbjct: 352 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYHPDGSEGQAYEI 411

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 412 DFTPPFRKISMVEELEKALGMKLPETNLFETEETRRILDDICVAKDVECPPPRTTARLLD 471

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 472 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 529

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE F   L   +P + G  MG DR+ M +T +NN
Sbjct: 530 DPVRQRQLFEEQAKAKAAGDDEAMFIDETFCTALEYGLPPTGGWGMGIDRVTMFLTDSNN 589

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 590 IKEVLLFPAMKPEDKK 605


>gi|331091968|ref|ZP_08340800.1| hypothetical protein HMPREF9477_01443 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330402867|gb|EGG82434.1| hypothetical protein HMPREF9477_01443 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 641

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 160/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I S++R+Y     F+E+++ 
Sbjct: 141 LQILPEKFHGLTNTDLRYRQRYVDLIMNPDVKDTFIKRSKIISAIRKYLDGQGFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G E+++     +RN 
Sbjct: 201 ILVSNAGGAA-ARPFETHF---NALNEDFKLRISLELYLKRLIVGGMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V      ++  V  +     E
Sbjct: 257 GLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRYVAQEVLGTTKITYNGVEMDLGKPFE 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D                   A++  +         DI +    E  
Sbjct: 317 RITMVDAVKKYAGVDWNEVQT------LKEARALAKEHKVEYEERHKKGDILALFFEEFA 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFE +    E+ NA  EL DPI+QR 
Sbjct: 371 EEH--LIQPTFVMDHPIEISPLTKKKPDNPEYTERFEFFMNGWEMANAYSELNDPIDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDF+  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 429 RFKAQEELLAQGDEEANTTDEDFMNALEIAMPPTGGIGFGIDRMCMLLTDSAAIRDVLLF 488

Query: 346 PFSQSN 351
           P  +S 
Sbjct: 489 PTMKSQ 494


>gi|86134315|ref|ZP_01052897.1| lysyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821178|gb|EAQ42325.1| lysyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 565

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 96/358 (26%), Positives = 163/358 (45%), Gaps = 27/358 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +  YR+R              +KR  + +++R +F +  + E+++  LQ  PG     
Sbjct: 156 DPEMRYRQRYADLVVNPNVKEVFIKRTKLFNAMRSFFNDAGYFEVETPVLQPIPGGAA-A 214

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F T     + +  PLY++ + E   K+++  G + ++ F+  +RN      H PEFT 
Sbjct: 215 RPFITH---HNSLDIPLYMRIANELYLKRIIVGGFDGVYEFSKNFRNEGMDRTHNPEFTA 271

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPEYITVAEAFARYA 178
           +E Y +++ Y  +M  C  ++   A   N     +F   N +  +    +T+A++   + 
Sbjct: 272 MEIYVSYKDYNWMMDFCEQLLEHCAIAVNGTSKATFGEHNIDFKAPYARVTMADSIKHFT 331

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D+              +   A+   I V        +   I  EK E N      T +
Sbjct: 332 GFDITG-------KTEDEIREAAKGMNIEVDETMGKGKLIDEIFGEKCEGNY--IQPTFI 382

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L   +  +P  T+RFEL  C  E+ NA  EL DPI+QR RFE +++   K 
Sbjct: 383 TDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERFEHQLKLAAKG 442

Query: 299 YNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
            +E    ID DFL  L   MP +SG+ +G DRL+M +T   +I EV++ P  +  ++ 
Sbjct: 443 DDEATEFIDHDFLRALEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFPQMRPEKKA 500


>gi|293376909|ref|ZP_06623126.1| lysine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325838530|ref|ZP_08166552.1| lysine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292644455|gb|EFF62548.1| lysine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325490825|gb|EGC93127.1| lysine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 495

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 156/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YRRR              + R  I +++R Y     ++E+++ 
Sbjct: 141 LRPLPEKYHGLTDVEERYRRRYVDLIMNEESKQTFITRTRIITAMRRYLDNLGYLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + +  PLYL+ + E   K+LL  G EK++     +RN 
Sbjct: 201 ILHTTLGGAA-ARPFETH---HNALDMPLYLRIATELHLKRLLVGGLEKVYEIGRIFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+   E +M    N+I   A+ V       +     N     +
Sbjct: 257 GISVRHNPEFTSIELYEAYGDMETMMDLTENMIASIAQEVLGTTTVPYGGHEINLAVGWK 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
              + +A      +D    +              A++  + V  H      I +    E 
Sbjct: 317 RWHMVDAIKEITGVDFFKEMT------FEEAKAIAKEHNVEVPTHFTGVGHIINAFFEEF 370

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    I   T +  +P   S LA     DPRFT RFE +    E  NA  EL DPI+Q+
Sbjct: 371 VEDK--IVQPTFIYGHPVEVSPLAKKNAKDPRFTDRFEFFIDGREYGNAFTELNDPIDQK 428

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE ++ EK+   +E   +D D++  L   MP + G+ +G DRLVML+T + +I +V+ 
Sbjct: 429 ERFEAQLAEKELGNDEASEMDVDYIEALEYGMPPAGGLGIGIDRLVMLLTNSPSIRDVLL 488

Query: 345 TPFSQ 349
            P  +
Sbjct: 489 FPTMR 493


>gi|312886772|ref|ZP_07746379.1| lysyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311300874|gb|EFQ77936.1| lysyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 579

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 95/374 (25%), Positives = 162/374 (43%), Gaps = 36/374 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              + R+ + S++R YF   
Sbjct: 142 LKPLPVVRREEDGTVHDAFTDPEMRYRQRYVDLTVNPEFKQIFMNRSKVISTMRSYFDSE 201

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ   G     R F T     + +  PL+L+ + E   K+L+ AG + ++ 
Sbjct: 202 GWMEVETPILQSVHGGAA-ARPFKT---YHNTLDMPLFLRIANELYLKRLIVAGFDGVYE 257

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVN 158
           F   +RN      H PEFT +E Y A++ Y  +M    + +   A   + K +       
Sbjct: 258 FGKMFRNEGMDRTHNPEFTSVEIYVAYKDYIWMMAMVEHCLEKVAMAVHGKAVVKVGEHE 317

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     E +++ ++  +Y  ID+          D   L    +   I V        + 
Sbjct: 318 INFAGPYEKLSMYDSILKYTGIDVSAM-------DEAALRQTCRDLAIEVDKTMGKGKLV 370

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I   K+E +  +   T +  YP   + LA  + +     +RFEL+    E+ NA  EL
Sbjct: 371 DEIFSAKVEEH--LIQPTYITDYPIEMTPLAKKHRSKEGLVERFELFVMGKEIANAYTEL 428

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE ++    +   E   +D+DFL  L   MP +SG+ +G DRLVML+T   
Sbjct: 429 NDPIDQRERFEDQLLLAGRGDEEAMAMDDDFLRALEYGMPPTSGLGIGIDRLVMLMTNQT 488

Query: 338 NINEVIWTPFSQSN 351
            I EV++ P  +  
Sbjct: 489 TIQEVLFFPQMRPE 502


>gi|261199768|ref|XP_002626285.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239594493|gb|EEQ77074.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 609

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 89/372 (23%), Positives = 156/372 (41%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  RD    YR+R              + R+ + + +R +F E  FIE+++ 
Sbjct: 217 LHQIPSEHYGLRDQEQRYRQRYLDLIMNDKSRNVFITRSKMITYIRRFFDERDFIEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++++ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNTIAGGAT-AKPFVTH---HNDLNMDMFMRIAPELYLKMLIVGGLERVYELGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     ++    +       +  +         N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDIMNVTEELVSGLVKHITGGYETTFHTQTGEEYKINW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                       L    ++  +     +T + +  ++
Sbjct: 393 KAPWKRIEMIPALEEATGEKFPPGDQLHTMETNAFLKKVLKKVNVECTPPETNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +       +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEETC--INPTFITGHPQMMSPLAKYHRDHVGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQASQKAQGDDEAQMIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF +  +
Sbjct: 571 EVLAFPFMKEEK 582


>gi|332292279|ref|YP_004430888.1| lysyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170365|gb|AEE19620.1| lysyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 564

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 99/359 (27%), Positives = 164/359 (45%), Gaps = 27/359 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +  YR+R              +KR  + +++R +F    + E+++  LQ   G     
Sbjct: 156 DPEMRYRQRYADLAVNPHVKEVFVKRTKLFNAMRNFFNNAGYFEVETPILQPIAGGAA-A 214

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F T     + +  PLY++ + E   K+L+  G E ++ F+  +RN      H PEFT 
Sbjct: 215 RPFVTH---HNSLDMPLYMRIANELYLKRLIVGGFEGVYEFSKNFRNEGMDRTHNPEFTA 271

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPEYITVAEAFARYA 178
           +E Y A++ Y  +M+ C  ++   A   N     +F     +  +    +T+A++   + 
Sbjct: 272 MEIYVAYKDYNWMMEFCEQLLEHCAMAVNGTTKATFGEHEVDFKAPYARVTMADSIKHFT 331

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D+              +   AQ  GI V        +   I  EK E N      T +
Sbjct: 332 GFDILD-------KTEDEIRAAAQGMGIEVDETMGKGKLIDEIFGEKCEGNY--IQPTYI 382

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L   +  +P  T+RFEL  C  E+ NA  EL DPI+QR RFE +++  K+ 
Sbjct: 383 TDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSELNDPIDQRERFEAQLELAKRG 442

Query: 299 YNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
            +E    ID DFL  L   MP +SG+ +G DRL+M +T   +I EV++ P  +  ++ +
Sbjct: 443 DDEATASIDYDFLRSLEYGMPPTSGMGIGMDRLIMFLTNNQSIQEVLFFPQMKPEKKAL 501


>gi|194467683|ref|ZP_03073670.1| lysyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454719|gb|EDX43616.1| lysyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 508

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 166/369 (44%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     + +  YR+R               +R  I  ++R+Y  +N F E+++ 
Sbjct: 139 LRPLPNKWDGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRKYMDDNGFTEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   +YL+ + E   K+L+  G E+++     +RN 
Sbjct: 199 ILNTQAGGA-NARPFITH---HNALDIDMYLRIATELYLKRLIVGGFERVYELGRIFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  ++ +M +   I++ AA+V +     ++Q    +     +
Sbjct: 255 GMDPHHNPEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDGKITYQGNEIDLGGNFK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A      ID        +          A +  +      T   I +    E +
Sbjct: 315 RITMVDAVKEKTGIDFSDESMTDEDA-----KKLADEHKVEYKPYWTKGHILNAFFEEFV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P  T RFELY    EL NA  EL DPI+Q+ 
Sbjct: 370 EDT--LIQPTFVYEFPVEVSPLAKRNADNPAMTDRFELYVDGSELANAFSELNDPIDQKE 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +EK    +E  P+D D++  L   MP + G+ +G DRLVML+T A +I +VI  
Sbjct: 428 RFEMQAKEKANGNDEAEPVDLDYVQALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILF 487

Query: 346 PFSQSNQEE 354
           P  +  +E 
Sbjct: 488 PTMRPEKEA 496


>gi|28377434|ref|NP_784326.1| lysyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254555617|ref|YP_003062034.1| lysyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300768967|ref|ZP_07078858.1| lysine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308179647|ref|YP_003923775.1| lysyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258343|sp|Q88Z28|SYK_LACPL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|28270266|emb|CAD63167.1| lysine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254044544|gb|ACT61337.1| lysyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300493488|gb|EFK28665.1| lysine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308045138|gb|ADN97681.1| lysyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 499

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 164/369 (44%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R              LKR  I S++R +  +  F E+++ 
Sbjct: 143 LRPLPDKFHGLQNVEQIYRQRYLDLISNRDSFDRFLKRTKIISAIRHHLDDQGFTEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 203 MLHNQAGGAA-ARPFVTH---HNALNIDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  +  +M +   I + AA+        ++ +   +     +
Sbjct: 259 GMDREHNPEFTMMETYVAYFDFHDVMAETEGIFKAAAQAVTDDGIVTYHDQKVDFNQPFK 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      ID    +   D          A +  ++         I +    E +
Sbjct: 319 QIHMVDAIKEKTGIDFWQPMSIED------AQKLADEHHVKYEPYWKVGHIINAFFEEFV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +N  T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 373 EDT--LNEPTFVYGHPVEISPLAKKNEEDPRFTDRFELFILGNEYANAFSELNDPIDQRQ 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  E+    +E   IDEDF+  L   MP + G+ +G DRLVML+T A++I +V+  
Sbjct: 431 RFEAQAAERTAGNDEAEHIDEDFVEALEYGMPPTGGLGIGIDRLVMLMTDADSIRDVLLF 490

Query: 346 PFSQSNQEE 354
           P  +  +++
Sbjct: 491 PTMRPEEDK 499


>gi|328954383|ref|YP_004371717.1| Lysyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454707|gb|AEB10536.1| Lysyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 493

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 169/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ I   +R++  + +F+E+++ 
Sbjct: 139 LRPLPEKYHGLSDVERRYRQRYLDLFVNPEVKGVFRARSRIIRLVRDFMEQREFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F T     + +  PLYL+ +PE   K+LL  G E++F    ++RN 
Sbjct: 199 MMQPIPGGAT-ARPFQT---YHNVLAMPLYLRIAPELYLKRLLVGGFERVFEINRSFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ +YE LM     +    A ++   +   +Q    +     +
Sbjct: 255 GVSTQHNPEFTMMEFYQAYATYEDLMMLTEEMFGQIATQITGGRQIDYQGHKIDLTPPWQ 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + E+  R   I            DR  L   A + G+ +   + +    +++    +
Sbjct: 315 RLEMQESLTRVGGI------PAALVQDRQALVQLALEQGVTLRPGEGYGRAMAKLFDLHV 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  +P   S L+     +P    RFEL+    E+ N   EL DP +QR 
Sbjct: 369 EPK--LIQPTFITGFPVEISPLSRRNQVNPELADRFELFIAGKEIANGFSELNDPDDQRQ 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K++  ++   +E + +DEDF+  L   MP ++G  +G DRLVML+T + +I +VI  
Sbjct: 427 RFLKQVAAREAGNDEAHFMDEDFVRALEYGMPPAAGEGIGIDRLVMLLTDSASIRDVILF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PQLRPE 492


>gi|73956986|ref|XP_850403.1| PREDICTED: similar to lysyl-tRNA synthetase isoform 3 [Canis
           familiaris]
 gi|73956998|ref|XP_861533.1| PREDICTED: similar to lysyl-tRNA synthetase isoform 8 [Canis
           familiaris]
          Length = 625

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 238 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 297

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 298 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKILVVGGIDRVYEIGRQFRNE 353

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +           
Sbjct: 354 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYHPDGPEGEAYEI 413

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 414 DFTPPFRRISMVEELEKALGVKLPETKLFETEETRKILDDICLARAVECPPPRTTARLLD 473

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 474 KLVGEFLETTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 531

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 532 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNN 591

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 592 IKEVLLFPAMKPEDKK 607


>gi|293606110|ref|ZP_06688475.1| lysine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292815565|gb|EFF74681.1| lysine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 507

 Score =  332 bits (850), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 157/366 (42%), Gaps = 22/366 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+    S+R++ +   F+E+++ 
Sbjct: 148 LRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKAVGSIRQFMLNAGFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 208 MLHPIPGGAA-AKPFVTH---HNALDMEMYLRIAPELYLKRLIVGGFERVFEVNRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA       + ++Q    +     +
Sbjct: 264 GVSPRHNPEFTMMEFYAAYAEYRWLMDFTEELIRQAAISATGSAVLTYQERELDLSKPFD 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +YA       LD+P      L  L A   G  V        +   +  E  
Sbjct: 324 RLTICEAILKYAPGYTQAQLDDPVFVRAELKKLGADADG-PVLSRAGLGALQLALFEETA 382

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    E+ N   EL DP +Q  
Sbjct: 383 EAK--LWNPTYIIDYPVEVSPLARASDTREGITERFELFMTGREIANGFSELNDPEDQAE 440

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++ K     E    D D++  L   MP + G  +G DRLVML+T + +I +VI  
Sbjct: 441 RFRSQVEAKDAGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILF 500

Query: 346 PFSQSN 351
           P  +  
Sbjct: 501 PHLRRE 506


>gi|229824567|ref|ZP_04450636.1| hypothetical protein GCWU000282_01911 [Catonella morbi ATCC 51271]
 gi|229785938|gb|EEP22052.1| hypothetical protein GCWU000282_01911 [Catonella morbi ATCC 51271]
          Length = 502

 Score =  332 bits (850), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 158/365 (43%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              + R+ I   +R +  +  ++E+++ 
Sbjct: 147 LRPLPDKYHGLTNVEQRYRQRYLDLISNEESRERFILRSKIVREIRRFLDDQGYLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHTIAGGAT-ARPFVTH---HNALDMELYLRIATELHLKRLVVGGIEKVYELGRIFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A++ Y  +M     +++  A  V N+    +            
Sbjct: 263 GIDTTHNPEFTTIECYTAYQVYTDVMDLIEGMLKNVAERVLNKTSLEYHGHTIELGQPWA 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEK 225
              + +       +D    +      D       A++ G+ +  HD T   + +    E 
Sbjct: 323 RRHMVDLIKEVTGVDFWQAM------DFDQAKALAKEHGVELNDHDTTVGHVINAFFEEH 376

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E        T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR
Sbjct: 377 CEDKC--IQPTFVYGHPVEVSPLARKNEEDPRFTDRFELFIVGKEYANAFTELSDPIDQR 434

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +M+EK K  +E  P+D++F+  L   MP + G  +G DRLVML TGA  I +V+ 
Sbjct: 435 QRFEAQMEEKNKGNDEAQPMDDEFIEALEYGMPPTGGWGLGIDRLVMLFTGATAIRDVLL 494

Query: 345 TPFSQ 349
            P  +
Sbjct: 495 FPTMR 499


>gi|296478235|gb|DAA20350.1| lysyl-tRNA synthetase [Bos taurus]
          Length = 623

 Score =  332 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 158/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 236 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 295

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 296 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 351

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +           
Sbjct: 352 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYHPDGPEGQAYEI 411

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 412 DFTPPFRKISMVEELEKALGMKLPETNLFETEETRRILDDICVAKDVECPPPRTTARLLD 471

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 472 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 529

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE F   L   +P + G  MG DR+ M +T +NN
Sbjct: 530 DPVRQRQLFEEQAKAKAAGDDEAMFIDETFCTALEYGLPPTGGWGMGIDRVTMFLTDSNN 589

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 590 IKEVLLFPAMKPEDKK 605


>gi|145219506|ref|YP_001130215.1| lysyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145205670|gb|ABP36713.1| lysyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 502

 Score =  332 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 101/354 (28%), Positives = 163/354 (46%), Gaps = 26/354 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           +R+  YR+R              +KR+ I S +R +F    ++E+++  LQ   G     
Sbjct: 162 DRELRYRQRYVDLIVNPEVRETFIKRSAIVSHMRSFFTAKGWLEVETPILQPIYGGAA-A 220

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F+T     + +   LYL+ + E   K+L+  G E +F FA  +RN      H PEFT 
Sbjct: 221 RPFTTH---HNALDMELYLRIANELYLKRLIVGGFEGVFEFAKDFRNEGIDRFHNPEFTQ 277

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARYA 178
           +E Y A++ Y  +M+    +    A   N    + F     +       IT+A++   Y 
Sbjct: 278 VELYVAYKDYNWMMELVEQLFHQTALAVNGSDTTSFLGNEISLKPPFRRITIADSIKEYT 337

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D+       +      L   A+  G+ +        I   I  E +EP   +   T +
Sbjct: 338 GADI-------EGKSEQELRNTAKDLGLELDPKIGPGKIIDEIFGEFVEPK--LIQPTFI 388

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S LA  +       +RFEL A   E+CN+  EL DP+ QR R E++   +++ 
Sbjct: 389 TDYPTEMSPLAKPHREKEGLVERFELIAGGKEICNSFSELNDPVVQRQRLEEQAGLRQRG 448

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            +E   +DEDFL  L   MP ++G+ +G DRLVML+TG ++I +VI+ P  +  
Sbjct: 449 DDEAMIVDEDFLRALEYGMPPTAGLGIGVDRLVMLLTGEDSIRDVIFFPHMKPE 502


>gi|91218337|ref|ZP_01255281.1| lysyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91183475|gb|EAS69874.1| lysyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 563

 Score =  332 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 99/379 (26%), Positives = 171/379 (45%), Gaps = 37/379 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R               KR+ + +++R +F E 
Sbjct: 136 LKPLPLPKKDREGHEYDGFQDAEQRYRQRYVDLVVNPGVKDIFKKRSALFTAMRNFFNEK 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G + ++ 
Sbjct: 196 GYMEVETPILQSIPGGAA-ARPFITH---HNALDIPLYLRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF-QNVN 158
           F+  +RN      H PEFT +E Y +++ Y  +M+   N++   A   N    +  +  +
Sbjct: 252 FSKNFRNEGMDRTHNPEFTAMEIYVSYKDYNWMMEFTENLLEYCALQVNGTTKTMFKEHH 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +  + +T+  A  ++   D+              L   A +  + V        + 
Sbjct: 312 VDFKAPYKRVTMTAAIIQFTGFDITG-------KSEEELRTAALEMNLEVNETMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E        T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGEKCEGK--FIEPTFIIDYPKEMSPLCKEHRDNPDLTERFELMVCGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPIEQR RFE +M+  +K  +E    ID DFL  L   MP +SG+ +G DRL+M +T  
Sbjct: 423 NDPIEQRERFEDQMKLSQKGDDEATEFIDYDFLRALEYGMPPTSGLGIGMDRLIMFLTNN 482

Query: 337 NNINEVIWTPFSQSNQEEI 355
            +I EV++ P  +  ++++
Sbjct: 483 PSIQEVLFFPQMRPEKKKV 501


>gi|218779631|ref|YP_002430949.1| lysyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218761015|gb|ACL03481.1| Lysyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 504

 Score =  332 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 166/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQP--WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              ++R+ I  ++R +F +  F+E+++ 
Sbjct: 136 LRPLPEKYNKLKDPEKRYRQRYLDLIMNEETRETFIRRSKIVRAMRRFFDQRDFLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG       F T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 196 MMQPIPGGA-EACPFVTH---HNALDMALYLRIAPELYLKRLVVGGLERVYEINRNFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+ +Y  LM+    + +  A+ V     F +Q    +     +
Sbjct: 252 GVSTRHNPEFTMLEFYWAYATYHDLMELTEEMFQHVAKEVLGSTTFMYQGQEISFEGPWK 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++  A       D           DR  L   A+   + +        I +++    +
Sbjct: 312 RISMFNALQTIGGAD------KEVLEDRDKLIAFAESKNVPIDKKARTGKIMTKLFDALV 365

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  YP   S L+     +P  T+RFEL+    E+ N   EL DP +QR 
Sbjct: 366 EPE--LVQPTFIHSYPVEVSPLSRRSQKEPDLTERFELFIAGKEIANGFSELNDPDDQRG 423

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++ +K+    E + +DED++  L   MP ++G  +G DRL ML+T A +I EVI  
Sbjct: 424 RFLQQVADKEAGDEEAHWMDEDYVEALEYGMPPTAGQGVGIDRLAMLLTDAASIREVILF 483

Query: 346 PFSQ 349
           P  +
Sbjct: 484 PHMR 487


>gi|154493632|ref|ZP_02032952.1| hypothetical protein PARMER_02972 [Parabacteroides merdae ATCC
           43184]
 gi|154086842|gb|EDN85887.1| hypothetical protein PARMER_02972 [Parabacteroides merdae ATCC
           43184]
          Length = 576

 Score =  332 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 152/374 (40%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  +  ++R    E  
Sbjct: 142 LKPLPVVKYKDGVAYDGFNDPELRYRQRYVDLVVNDGVKDIFMKRAAVIKTMRTALDEAG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ  PG  +  R F T     + +   LYL+ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPILQSIPGGAS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     ++       N    S  +    
Sbjct: 258 GKNFRNEGMDRTHNPEFTCMELYVQYKDYNWMMSFTEQLLERICIAVNGTCESVVDGKTI 317

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            F      + + +A       DL              +    +   + +        +  
Sbjct: 318 NFKAPYRRLPILDAIKEKTGYDLNG-------KSEDEIRTICKDLNLEIDETMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     E+ NA  EL 
Sbjct: 371 EIFGEFCEGT--FIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMINGKEVANAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++++  +K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 429 DPIDQEERFKEQLRLSEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQTT 488

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 489 IQEVLLFPQMRPEK 502


>gi|322514329|ref|ZP_08067382.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119783|gb|EFX91817.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 500

 Score =  332 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     +++  YR+R              + R+ + S +R++F+E  FIE+++ 
Sbjct: 146 LRPLPNKVQGLTDQETRYRQRYLDLISNEESRRTFMIRSKVVSGIRQFFLEKDFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-AKPFITH---HNVLDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++       +     +     E
Sbjct: 262 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLAIDILGTTTVPYGEYVFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y N      +   D          A+  GI +        + + I  E  
Sbjct: 322 RITMHDAIVKYGN-----GITREDLDSFEKSVEIAKGLGIEIQKPWGLGSVVNAIFEEVA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 377 EHQ--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DEDF+  L   +P ++G  +G DRL M+   A +I +VI  
Sbjct: 435 RFDAQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PAMR 498


>gi|119112485|ref|XP_317634.3| AGAP007858-PA [Anopheles gambiae str. PEST]
 gi|116123376|gb|EAA12164.3| AGAP007858-PA [Anopheles gambiae str. PEST]
          Length = 572

 Score =  332 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 85/374 (22%), Positives = 152/374 (40%), Gaps = 28/374 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R  I S +R +     F+E+++ 
Sbjct: 195 LHMLPHLHYGLKDKETRYRQRYLDLMLNNDVRSIFVTRARIISFIRRFLDGAGFLEVETP 254

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K L   G ++++     +RN 
Sbjct: 255 MMNMIAGGAT-AKPFVTH---HNDLNMDLFLRIAPELYLKMLTVGGLDRVYEIGRQFRNE 310

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y A+  Y  LM+    ++       +       +           
Sbjct: 311 GMDVTHNPEFTTCEFYMAYADYNDLMEITEQLLSSLVYSVHGSFKVKYHPEGHGGDEVEI 370

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I++ +      ++                L    QQ  I      T + +  
Sbjct: 371 DFTPPFKRISMIDTLEDVLSVKFPPADQLDTPEAAKFLEELCQQRNIDCQPPRTTARLLD 430

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           + + E +E N   +  T +  +P   S LA  +      T+RFEL+    E+CNA  EL 
Sbjct: 431 KFVGEFLEGNC--HNPTFICDHPQIMSPLAKYHRTRSGLTERFELFVMGKEICNAYTELN 488

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP  QR RF+++  EK    +E   +DE+F   L   +P + G  +G DRL M +T   +
Sbjct: 489 DPAVQRQRFKQQAAEKAAGNDEAQLVDENFCTALEYGLPPTGGWGLGIDRLAMFLTDCTS 548

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  + ++
Sbjct: 549 IKEVLLFPAMKPDE 562


>gi|255020529|ref|ZP_05292593.1| Lysyl-tRNA synthetase (class II) [Acidithiobacillus caldus ATCC
           51756]
 gi|254970049|gb|EET27547.1| Lysyl-tRNA synthetase (class II) [Acidithiobacillus caldus ATCC
           51756]
          Length = 495

 Score =  332 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 106/367 (28%), Positives = 161/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  +R+R                R+   ++LR     + FIE+++ 
Sbjct: 139 LRPLPEKWHGLSDPETRFRQRYVDLIVTESTRRTFRIRSQTVAALRAVLSNDGFIEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F T       +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMQPIPGGAT-ARPFITH---HHALDMTLYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLEWY A+  Y   M  C  +IR AA+         +Q +  +      
Sbjct: 255 GVSTRHNPEFTMLEWYEAYADYTMAMDRCETLIRAAAQAALGSTDIHYQGLAIHLGEPFA 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + VAEA  RY        L + +  D  +L  + ++ G     D  W      +  + +
Sbjct: 315 RLGVAEAVRRY-----HPDLAHKNLRDAGILGDKLRELGHPCPADWGWGKRLVELFEKTV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  YP   S LA    ADP  T RFEL+    EL N   EL DP +Q  
Sbjct: 370 EPR--LEQPTFITEYPLEVSPLARRCSADPELTDRFELFIAGRELANGFSELNDPDDQAA 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++  K+    E    D D++  L   MP ++G+ +G DRLVML+    +I EVI  
Sbjct: 428 RFRAQVAAKEAGDEEAMFFDADYIRALEYGMPPTAGVGLGVDRLVMLLADQPSIREVILF 487

Query: 346 PFSQSNQ 352
           P  +  Q
Sbjct: 488 PHLRPEQ 494


>gi|114320955|ref|YP_742638.1| lysyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227349|gb|ABI57148.1| lysyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 499

 Score =  332 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 92/369 (24%), Positives = 153/369 (41%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              + R+ + + +R++     F+E+++ 
Sbjct: 142 LRPLPEKYHGLTDTEARYRQRYVDLIMNDDSRRVFMLRSRLVAGIRDFLNGRGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 202 MMQPIPGGAT-ARPFVTH---HNALGADLYLRVAPELYLKRLVVGGFEQVYEINRNFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  +  LM     ++R  A E       ++Q    +      
Sbjct: 258 GVSTRHNPEFTMLEFYQAYADHNDLMDLTEAMLRRLAEEQLGTTQITYQGETFDFGRPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A   +        +      DR      A    I +   +    +   I     
Sbjct: 318 RIRMVDAICEF-----NPDIGPEALTDRDSALNLAGHLNIPLMGHEGLGKLQMVIFETTT 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP +T+RFEL     E+ N   EL D  +Q  
Sbjct: 373 EHK--LREPTFVTHYPKEVSPLARPVDDDPFYTERFELIVGGREIANGFSELNDAEDQAE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +  EK    +E    D DF+  L   +P ++G  +G DRLVML   A +I +V+  
Sbjct: 431 RFRAQAAEKAAGDDEAMHYDADFIRALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVLLF 490

Query: 346 PFSQSNQEE 354
           P  +    E
Sbjct: 491 PAMRPETGE 499


>gi|119468800|ref|XP_001257882.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119406034|gb|EAW15985.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 605

 Score =  332 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 89/372 (23%), Positives = 158/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H IPS+ +   +++  +R+R              + R+ I S +R +F    FIE+++ 
Sbjct: 214 LHAIPSEHYGFQDKEQRFRQRYLDLIMNERSRNVFVTRSKIVSYVRNFFDSRDFIEVETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 274 MMNAIAGGAT-AKPFITH---HNDLDMNLFMRVAPELYLKMLIVGGLERVYELGRQFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     +I    +       +  +       N N 
Sbjct: 330 GIDLTHNPEFTTCEFYWAYADVYDVMNLTEELISGLVKHVTGGYETTFHTQSGEVYNVNW 389

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    + +  A                       L    ++ G+  +   T + +  ++
Sbjct: 390 KAPWRRVEMIPALEEATGEKFPPGDQLHTAETGEFLKRVLKKTGVECSPPLTNARMLDKL 449

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +       +RFE + C  E+ NA  EL DP
Sbjct: 450 VGEFIEETCV--NPTFITGHPQMMSPLAKYHRQHAGLCERFEAFVCKKEIVNAYTELNDP 507

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 508 FDQRLRFEEQARQKDQGDDEAQLIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 567

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 568 EVLAFPFMKEDK 579


>gi|24372578|ref|NP_716620.1| lysyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|39932202|sp|Q8EI58|SYK_SHEON RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24346596|gb|AAN54065.1|AE015543_5 lysyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 500

 Score =  332 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + +++R + ++ +F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVVAAIRNFMIKKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A          +     +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYQDLMDLTEELLSSIAIELLGSAQMPYGEHTVDFGGPYA 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA  +Y   +     +      D   +   A   GI++    T   +   I  E 
Sbjct: 315 RLSMLEAIQKYNPDNATIQAMTYEQVKDLEFMRELAISLGIKIEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AE--WQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAQDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 SRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|183599837|ref|ZP_02961330.1| hypothetical protein PROSTU_03354 [Providencia stuartii ATCC 25827]
 gi|188022109|gb|EDU60149.1| hypothetical protein PROSTU_03354 [Providencia stuartii ATCC 25827]
          Length = 506

 Score =  332 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I + LR + V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFMVRSKILAELRNFMVGKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L+     + R  A+ V    +  +     +      
Sbjct: 266 GLSPRHNPEFTMMELYMAYADYRDLIDLTEELFRTLAQNVLGNTVVKYGEQEFDFGKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         +  D  D       AQ  GI+V +      +   I  E  
Sbjct: 326 KLTMKEAICKY-----RPETNVADLDDMDKAVAIAQSIGIKVENSWGLGRVQCEIFEEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 ESH--LIQPTFIIEYPAEVSPLARRNDENPFITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++++K +  +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 439 RFAEQVRQKDEGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTDSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  + ++
Sbjct: 499 PALRPSK 505


>gi|88808214|ref|ZP_01123725.1| lysyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788253|gb|EAR19409.1| lysyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 497

 Score =  332 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 157/367 (42%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R +  S++R +  E +F+EI++ 
Sbjct: 142 LQPLPDKWHGLADVEKRYRQRYLDLIVTPQSRETFRRRALTVSAIRRWLDEREFLEIETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+L+  G E+++     +RN 
Sbjct: 202 VLQAEAGGA-DARPFITH---HNTLDLPLYLRIATELHLKRLVVGGFERVYELGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  ++    ++I     +V      ++Q    +      
Sbjct: 258 GMSTRHNPEFTSVEVYQAYTDYLGMIDLTESMIASICQQVCGSTRLAYQGTEIDLTPPWR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
             T+ E       +D  T        DR          G+ V    D+   + +      
Sbjct: 318 RATMHELVEEATGLDFTTF------SDREAAAEAMAAKGLPVPEKADSVGRLLNEAFEHA 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E N  +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL+DP++QR
Sbjct: 372 VEAN--LTQPTFVLDYPEEISPLARKHRSKPGLVERFELFIVGRETANAFSELIDPVDQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   +     E   +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 430 GRLEAQQARRAAGDEEAQGVDEDFLQALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 489

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 490 FPLLRPE 496


>gi|148543508|ref|YP_001270878.1| lysyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184152915|ref|YP_001841256.1| lysyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227363657|ref|ZP_03847771.1| lysine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|325681852|ref|ZP_08161371.1| lysine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148530542|gb|ABQ82541.1| lysyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224259|dbj|BAG24776.1| lysyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071326|gb|EEI09635.1| lysine--tRNA ligase [Lactobacillus reuteri MM2-3]
 gi|324978943|gb|EGC15891.1| lysine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 508

 Score =  332 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 166/369 (44%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     + +  YR+R               +R  I  ++R+Y  +N F E+++ 
Sbjct: 139 LRPLPNKWDGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRKYMDDNGFTEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   +YL+ + E   K+L+  G E+++     +RN 
Sbjct: 199 ILNTQAGGA-NARPFITH---HNALDIDMYLRIATELYLKRLIVGGFERVYELGRIFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  ++ +M +   I++ AA+V +     ++Q    +     +
Sbjct: 255 GMDPHHNPEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDGKITYQGHEIDLGGNFK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A      ID        +          A +  +      T   I +    E +
Sbjct: 315 RITMVDAVKEKTGIDFSDESMTDEDA-----KKLADEHKVEYKPYWTKGHILNAFFEEFV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P  T RFELY    EL NA  EL DPI+Q+ 
Sbjct: 370 EDT--LIQPTFVYEFPVEVSPLAKRNADNPAMTDRFELYVDGSELANAFSELNDPIDQKE 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +EK    +E  P+D D++  L   MP + G+ +G DRLVML+T A +I +VI  
Sbjct: 428 RFEMQAKEKANGNDEAEPVDLDYVQALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILF 487

Query: 346 PFSQSNQEE 354
           P  +  +E 
Sbjct: 488 PTMRPEKEA 496


>gi|53715094|ref|YP_101086.1| lysyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|81381368|sp|Q64PM9|SYK_BACFR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52217959|dbj|BAD50552.1| lysyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 575

 Score =  331 bits (849), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 97/359 (27%), Positives = 160/359 (44%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              +KR+ + SS+REYF    ++E+++  LQ   G 
Sbjct: 157 DSFEDPELRYRQRYVDLAVNEGVKDIFIKRSKVYSSMREYFNSKGYMEVETPILQAIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
               R F T     + +  PLY++ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AA-ARPFMTH---HNALDIPLYMRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y A++ Y  +M+    +I     +V         +   N  +  + +T+  A 
Sbjct: 273 EFTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTEVKVGDNIINFKAPYKRVTMLGAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             +   DL          +   +    ++  + +        +   I  E  E       
Sbjct: 333 KEHTGYDLTGM-------NEEQIREVCKKLNMEIDDTMGKGKLIDEIFGEFCEGTY--IQ 383

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L   +  +P  T+RFEL     ELCNA  EL DPI+Q  RFE +M+ 
Sbjct: 384 PTFITDYPIEMSPLTKKHRDNPELTERFELMVNGKELCNAYSELNDPIDQLERFEDQMKL 443

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DF+  L   MP +SG+ +G DRL ML+TG + I EV++ P  +  +
Sbjct: 444 SEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQMRPEK 502


>gi|306821054|ref|ZP_07454672.1| lysine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550890|gb|EFM38863.1| lysine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 500

 Score =  331 bits (849), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 169/369 (45%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              L RN    +LRE+  + +FIE+++ 
Sbjct: 137 LRILPEKYHGLKDMDLRYRQRYVDLIVNPEVKEAFLTRNKAIKALREFLEQREFIEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F T     + +   +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 197 ILNTIAGGAT-ARPFITH---HNTLDIDMYLRIANELYLKRLIVGGFEKVYEMGRMFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PE+T +E Y+A+  YE +MK    ++   A  A    + ++Q    +      
Sbjct: 253 GMDIKHNPEYTAMELYQAYADYEDIMKLTEELVAYMAVAATGSTLINYQGKQIDLKPPWR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +A   YANID        D          A++  I +  +     + + I  +  
Sbjct: 313 RLSMTDAIKEYANID------FEDIKTDEEAVELARKHNIEIIPEMKRGHVIAGIFEKYC 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L+   P DPR T RFE +    E+ NA  EL DPI+QR 
Sbjct: 367 EDK--LINPTFITHHPVEISPLSKRNPEDPRITNRFEAFVNTWEIANAFSELNDPIDQRA 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++++++    E   +DEDFL  +   +P + G+ +G DR++ML+T + +I +VI  
Sbjct: 425 RFMDQLRQRELGDEEAQMLDEDFLNAIEVGLPPTGGLGIGIDRVIMLLTNSASIRDVILF 484

Query: 346 PFSQSNQEE 354
           P  +   +E
Sbjct: 485 PTMKPISKE 493


>gi|226941342|ref|YP_002796416.1| lysyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254782474|sp|C1DB68|SYK_LARHH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226716269|gb|ACO75407.1| Syk [Laribacter hongkongensis HLHK9]
          Length = 503

 Score =  331 bits (849), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 160/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I  ++RE  V   ++E+++ 
Sbjct: 149 LRPLPDKFHGLADQEQKYRQRYVDLIINQDSRDTFIKRSKIVQTVREVMVGEDYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +  PLYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MMHPIPGGAA-AKPFVTH---HNALDMPLYLRIAPELYLKRLVVGGLERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  YE++M+    IIR CA         ++     +     +
Sbjct: 265 GMSTRHNPEFTMIEFYEAYCGYERMMEMTEKIIRRCAEAACGTTKVTYNGKEVDLGKPFD 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+  A   Y          +    D   L  + +  G ++        +   +  E  
Sbjct: 325 RFTIVGAIKHY-----NPQYTDEQLADEAWLKSEIKALGGKLPPAPGIGSLQLALFEECA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    ADP  T+RFEL+    E  N   EL DP +Q  
Sbjct: 380 EGK--LWNPTFIIDYPVEVSPLARGSDADPSITERFELFIVGREHANGYSELNDPEDQAA 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++++K    +E    D D++  +   +P + G  +G DRLVML+T A +I +VI  
Sbjct: 438 RFRSQVEQKDAGDDEAMHYDADYIRAMEYGLPPTGGCGIGIDRLVMLLTDAPSIRDVILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PHMRPE 503


>gi|57237456|ref|YP_178469.1| lysyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81354013|sp|Q5HW66|SYK_CAMJR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|57166260|gb|AAW35039.1| lysyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315057824|gb|ADT72153.1| Lysyl-tRNA synthetase (class II) [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 501

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 158/368 (42%), Gaps = 27/368 (7%)

Query: 3   QIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R              L R+ + S +R +F    F+E+++  +
Sbjct: 142 PLPEKYHGLTDIEQRYRKRYVDMIMNAEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMM 201

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN   
Sbjct: 202 HPIAGGA-NAKPFVT---FHNSLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGM 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A+ +Y+ LM     +     +  N  K   F     +     E I
Sbjct: 258 DLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLDKLNLGKTIEFDGKMIDFSKPFERI 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T  +A  +Y  +D           D+  +  + +  G           + + +    +E 
Sbjct: 318 TYKDALCKYGGLDRD------LIEDKEKILTKLKADGFEANEKLELGHLQAELFDNYVEE 371

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L+     D +  +RFEL+ C  EL N  +EL DP++Q  RF
Sbjct: 372 K--LINPTFVIDFPISISPLSRRSDEDSQIAERFELFICGRELANGFNELNDPLDQYERF 429

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+++ K     E   +DEDF+  L   MP ++G  +G DRLVML+T   +I +VI  P 
Sbjct: 430 LKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPA 489

Query: 348 SQSNQEEI 355
            +  + E+
Sbjct: 490 MRPLKSEL 497


>gi|60683052|ref|YP_213196.1| lysyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|253566194|ref|ZP_04843648.1| lysyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|265766944|ref|ZP_06094773.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|81313892|sp|Q5L9E5|SYK_BACFN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|60494486|emb|CAH09283.1| putative lysyl-tRNA synthetase, heat inducible [Bacteroides
           fragilis NCTC 9343]
 gi|251945298|gb|EES85736.1| lysyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|263253321|gb|EEZ24797.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301164518|emb|CBW24077.1| putative lysyl-tRNA synthetase, heat inducible [Bacteroides
           fragilis 638R]
          Length = 575

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 97/359 (27%), Positives = 160/359 (44%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              +KR+ + SS+REYF    ++E+++  LQ   G 
Sbjct: 157 DSFEDPELRYRQRYVDLAVNEGVKDIFIKRSKVYSSMREYFNSKGYMEVETPILQAIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
               R F T     + +  PLY++ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AA-ARPFMTH---HNALDIPLYMRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y A++ Y  +M+    +I     +V         +   N  +  + +T+  A 
Sbjct: 273 EFTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTEVKVGDNIINFKAPYKRVTMLGAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             +   DL          +   +    ++  + +        +   I  E  E       
Sbjct: 333 KEHTGYDLTGM-------NEEQIREVCKKLNMEIDDTMGKGKLIDEIFGEFCEGTY--IQ 383

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L   +  +P  T+RFEL     ELCNA  EL DPI+Q  RFE +M+ 
Sbjct: 384 PTFITDYPIEMSPLTKKHRDNPELTERFELMVNGKELCNAYSELNDPIDQLERFEDQMKL 443

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DF+  L   MP +SG+ +G DRL ML+TG + I EV++ P  +  +
Sbjct: 444 SEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQMRPEK 502


>gi|189499923|ref|YP_001959393.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189495364|gb|ACE03912.1| lysyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 515

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 103/377 (27%), Positives = 171/377 (45%), Gaps = 39/377 (10%)

Query: 1   MHQIPSQP-------------WWNRDFHYRRR-----------PFLLKRNMIQSSLREYF 36
           +  IP                + +++  YR+R              +KR+ I S +R +F
Sbjct: 152 LRPIPVAKEKEVDGKKVTYDAFSDKETRYRQRYVDLIVNPEVKETFIKRSAIISFMRNFF 211

Query: 37  VENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
            E  ++E+++  LQ   G     R F+T     + +   LYL+ + E   K+L+  G + 
Sbjct: 212 SERGYLEVETPILQPVYGGAA-ARPFTTH---HNALNMELYLRIANELFLKRLIVGGFDG 267

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQ 155
           +F FA  +RN      H PEFT +E Y A++ Y  +M+    +I R    ++  +  +F 
Sbjct: 268 VFEFAKDFRNEGIDRFHNPEFTQVELYVAYKDYYWMMELVEELIYRTNLAISASESTTFL 327

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
               N       I++A A   Y  +D+    +         L   A+  G+ +    +  
Sbjct: 328 GHEINLKPPYRRISIAAAIQEYCAVDIRDKSETE-------LRNTAKDLGLSLDPKISSG 380

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            I   I  E +EP   +   T +  YP   S LA  + ++    +RFEL     ELCN+ 
Sbjct: 381 KIIDEIFGEFVEPK--LIQPTFIIDYPTEMSPLAKEHRSEKGVVERFELIVGGKELCNSF 438

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP+ QR R E + + + +  +E   +DEDFL  L   MP  +G+ +G DRLVML+T
Sbjct: 439 SELNDPVVQRERLEAQAKLRLRGDDEAMIVDEDFLRALEYGMPPCAGLGIGVDRLVMLLT 498

Query: 335 GANNINEVIWTPFSQSN 351
           G ++I +VI+ P  +  
Sbjct: 499 GQDSIRDVIFFPHMKPE 515


>gi|227544676|ref|ZP_03974725.1| lysine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300909082|ref|ZP_07126545.1| lysine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185322|gb|EEI65393.1| lysine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894489|gb|EFK87847.1| lysine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 508

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 99/368 (26%), Positives = 166/368 (45%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     + +  YR+R               +R  I  ++R+Y  +N F E+++ 
Sbjct: 139 LRPLPNKWDGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVRKYMDDNGFTEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   +YL+ + E   K+L+  G E+++     +RN 
Sbjct: 199 ILNTQAGGA-NARPFITH---HNALDIDMYLRIATELYLKRLIVGGFERVYELGRIFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  ++ +M +   I++ AA+V +     ++Q    +     +
Sbjct: 255 GMDPHHNPEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDGKITYQGHEIDLGGNFK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A      ID        +          A +  I      T   I +    E +
Sbjct: 315 RITMVDAVKEKTGIDFSDESMTDEDA-----KKLADEHKIEYKPYWTKGHILNAFFEEFV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P  T RFELY    EL NA  EL DPI+Q+ 
Sbjct: 370 EDT--LIQPTFVYEFPVEVSPLAKRNADNPAMTDRFELYVDGSELANAFSELNDPIDQKE 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +EK    +E  P+D D++  L   MP + G+ +G DRLVML+T A +I +VI  
Sbjct: 428 RFEMQAKEKANGNDEAEPVDLDYVQALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILF 487

Query: 346 PFSQSNQE 353
           P  +  +E
Sbjct: 488 PTMRPEKE 495


>gi|74316911|ref|YP_314651.1| lysyl-tRNA synthetase, class-2 [Thiobacillus denitrificans ATCC
           25259]
 gi|123745516|sp|Q3SKD9|SYK_THIDA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|74056406|gb|AAZ96846.1| lysyl-tRNA synthetase, class-2 [Thiobacillus denitrificans ATCC
           25259]
          Length = 501

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 157/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              ++R+ I  ++RE+   + F+E+++ 
Sbjct: 146 LRPLPEKFHGLADQEQKYRQRYLDLITNDDARSTFVRRSKIIQAIREFMTGHGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   L+L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 206 MMHPIPGGAA-AKPFVTH---HNALDMELFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR  A  A      S+Q       +  +
Sbjct: 262 GLSTRHNPEFTMMEFYEAYREYRYLMDFTEALIRHTAVAATGSTTISYQGSTIELGTPFD 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y               DR  L  Q      +    D    +      E  
Sbjct: 322 RLTIVEAVRKY-----HPEYTVEQLNDRDWLTAQFTAMKAKYREHDGLGGLQLTFFEETT 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA      P  T+RFEL+    E+ N   EL D  +Q  
Sbjct: 377 EA--LLVQPTFIVDYPAEVSPLARRSDTQPEITERFELFITGREMANGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++ K+    E    D DF+  L   +P + G  +G DRLVML+T + +I +VI  
Sbjct: 435 RFMEQVRAKEAGDEEAMHYDADFIRALEHGLPPTGGCGIGIDRLVMLLTDSPSIRDVILF 494

Query: 346 PFSQSN 351
           P  +  
Sbjct: 495 PQMRRE 500


>gi|302679128|ref|XP_003029246.1| hypothetical protein SCHCODRAFT_69392 [Schizophyllum commune H4-8]
 gi|300102936|gb|EFI94343.1| hypothetical protein SCHCODRAFT_69392 [Schizophyllum commune H4-8]
          Length = 595

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 159/379 (41%), Gaps = 32/379 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIP+  +  +D    YR+R              + R+ I + +R +     F+E+++ 
Sbjct: 206 LHQIPTSHFGLKDQETRYRKRYLDLIISPNTRKIFVTRSRIVNYIRRFLDNLGFMEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
                 G  T  + F T     + +   L+L+ +PE   K+L+  G ++++     +RN 
Sbjct: 266 MTSMIAGGAT-AKPFVTH---HNDLNLDLFLRIAPELYLKQLVVGGLDRVYEIGRVFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNV--------- 157
                H PEFT+ E+Y A+     LM     +I    +         F            
Sbjct: 322 GIDLTHNPEFTICEFYMAYADMYDLMDITEAMIEGLVKSLTGGTTLEFYPDGNAGTEGAR 381

Query: 158 --NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
             N N     +   + E       +          +     L     +  +  +   T +
Sbjct: 382 VLNLNFQRPWKRYDMIETLEEKLGVKFPPGETLHTEEANKFLRELCVKHNVDCSEPRTNA 441

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            +  +++ E IEP         +  +P   S LA  + + P   +RFE + C  E+CNA 
Sbjct: 442 RLLDKLVGEFIEPLC--ISPAFIVGHPQVMSPLAKYHRSRPGLCERFEGFLCGKEICNAY 499

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP EQR RFE+++++K+   +E   IDE F+  L   +P + G  +G DRLVM +T
Sbjct: 500 TELNDPFEQRLRFEEQVRQKEAGDDEAQGIDETFVDALEHGLPPTGGWGIGIDRLVMFLT 559

Query: 335 GANNINEVIWTPFSQSNQE 353
            + NI EV+  P  +  ++
Sbjct: 560 NSTNIKEVLLFPAMKPLEQ 578


>gi|317493836|ref|ZP_07952253.1| lysyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918163|gb|EFV39505.1| lysyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 505

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 162/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+   +++R + V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANEESRETFRIRSKTLAAIRSFMVNKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L+    ++ R    EV    I  + +   +      
Sbjct: 266 GVSPRHNPEFTMMELYMAYADYKDLIVLTEDLFRTLTQEVLGSSIVQYGDQTFDFGKPFI 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E+   Y        +   D  D       A+  GI++        I   I  E  
Sbjct: 326 KMTMKESINHY-----RPDIKMEDLDDLEKATKIAESLGIKIEKSWGLGRIQCEIFDETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EKN--LIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +++ K +  +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 439 RFQDQVRAKDEGDDEAMFYDEDYVTSLEHGLPPTAGLGIGIDRMMMLFTNSHTIRDVILF 498

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 499 PAMRPIK 505


>gi|224064651|ref|XP_002197190.1| PREDICTED: lysyl-tRNA synthetase [Taeniopygia guttata]
          Length = 586

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 87/373 (23%), Positives = 154/373 (41%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R  I + LR +  E  F+E+++ 
Sbjct: 206 LHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYLRSFLDELGFLEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 266 MMNVIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 322 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQTYEI 381

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++     +   +   +T     +  R        +  +      T + +  
Sbjct: 382 DFTPPFRRISMVYDLEKVLGVKFPSTECFATEETRRFFDNLCVERNVECPPPRTTARLLD 441

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 442 KLVGEFLEVTC--INPTFICDHPQVMSPLAKWHRSLPGLTERFELFVMKKEVCNAYTELN 499

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP  QR  FE + + K    +E   IDE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 500 DPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 559

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 560 IKEVLLFPAMKPE 572


>gi|113969171|ref|YP_732964.1| lysyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|114048687|ref|YP_739237.1| lysyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|117921734|ref|YP_870926.1| lysyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|123029921|sp|Q0HM10|SYK_SHESM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123030336|sp|Q0HRS5|SYK_SHESR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229829|sp|A0L0F1|SYK_SHESA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|113883855|gb|ABI37907.1| lysyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|113890129|gb|ABI44180.1| lysyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|117614066|gb|ABK49520.1| lysyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 500

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + +++R + ++ +F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVVAAIRNFMIKKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A          +     +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSIAIELLGSAQMPYGEHTVDFGGPYA 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA  +Y   +     +      D   +   A   GI++    T   +   I  E 
Sbjct: 315 RLSMLEAIQKYNPDNATIQAMTYEQVKDLEFMRELAISLGIKIEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AE--WQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 SRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|268315876|ref|YP_003289595.1| lysyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333410|gb|ACY47207.1| lysyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 523

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 99/377 (26%), Positives = 159/377 (42%), Gaps = 35/377 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P              +++F YR+R               KR  + +++R +  E  
Sbjct: 146 LRPLPVVKEQDGKVYNEVTDKEFRYRQRYADLIINPEVREVFRKRARMITTIRRFLDERG 205

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           ++E+++  LQ   G  +  R F T     + +   LYL+ + E   K+L+  G E ++  
Sbjct: 206 YLEVETPILQPMYGGAS-ARPFIT---YHNALDMQLYLRIADELYLKRLIVGGYEGVYEI 261

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNC 159
              +RN      H PEFTMLE Y A++ Y  +M     ++   A          +     
Sbjct: 262 GKDFRNEGLSRFHNPEFTMLELYVAYKDYYWMMDFVEELLEHVATEVTGSPEVQWGEHTI 321

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + EA       DL           R  L   A++ G+ +        I  
Sbjct: 322 SFRRPWPRIPMFEAIKERTGYDLYG-------KSRDELAEIARKLGLEIDDTMGSGKIID 374

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E +EP+  +   T +  YP   S LA  +   P   +RFE+     ELCNA  EL 
Sbjct: 375 EIFGEFVEPH--LIQPTFIIDYPIELSPLAKRHREKPGLVERFEVIVGGKELCNAFSELN 432

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE++ + +     E   IDEDFL  L   MP ++G+ +G DRL M++T   +
Sbjct: 433 DPDDQRARFEEQARLRAAGDEEAMQIDEDFLRALEYGMPPTAGLGIGIDRLAMILTNQPS 492

Query: 339 INEVIWTPFSQSNQEEI 355
           I +VI  P  +  Q  +
Sbjct: 493 IRDVILFPLLRPEQPAV 509


>gi|291166187|gb|EFE28233.1| lysine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 508

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 100/372 (26%), Positives = 174/372 (46%), Gaps = 30/372 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +     + D  YR+R              +KR+    +L+EY     F+E+D+ 
Sbjct: 144 LHPLPDKHAGLKDPDLRYRQRYVDLIVNPEVKESFIKRSKAIKALKEYLDNRGFLEVDTP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   +Y++ + E   K+L+  G EK++     +RN 
Sbjct: 204 ILSTIAGGA-NARPFKTH---HNTLNLEMYMRIANELYLKRLIVGGFEKVYEMGRMFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PE+T +E Y+A+  YE++M+    I+   AE      +  +Q    +      
Sbjct: 260 GMDINHNPEYTAIEIYQAYVDYEEIMRLTEGIVSYMAEKSTGSMVVDYQGTEIDFTPPWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEK 225
            I++ +A   Y  +D      + +          A++ GI +     T   I S    E 
Sbjct: 320 RISMIDAVKEYVGVDFNKIDTDEE------AIAIAKEKGIELTPATMTRGHIISLFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E ++     T +  +P   S L+   P D R T RFE +A   E+ NA  EL DP++QR
Sbjct: 374 CEEHMV--QPTFVTGHPVEISPLSKRDPLDTRLTHRFEAFANRWEIANAFSELNDPVDQR 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +M++K+   +E + +DEDFL  +   +P + G+ +G DR++ML+T A++I +VI 
Sbjct: 432 QRFEDQMRQKELGDDEAHEMDEDFLNAIEVGLPPTGGLGIGVDRVIMLLTNASSIRDVIL 491

Query: 345 TPFSQS--NQEE 354
            P  +    ++E
Sbjct: 492 FPTMKPIGKKDE 503


>gi|33241228|ref|NP_876170.1| lysyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|39932090|sp|Q7V9Q0|SYK_PROMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33238758|gb|AAQ00823.1| Lysyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 502

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 165/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R +  S++R +  E  F+EI++ 
Sbjct: 143 LQPLPDKWHGLADIEKRYRQRYLDLVVNPDSRKTFRRRALTVSAIRRWLDERSFLEIETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     +    PL+L+ + E   K+L+  G E+++     +RN 
Sbjct: 203 VLQSAAGGA-DARPFITH---HNTFDIPLFLRIATELHLKRLVVGGFERVYELGRIFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A   Y Q+M     +I     E+      S+Q+V+ +      
Sbjct: 259 GISTRHNPEFTSVEIYQAFADYNQMMDLTEELISSVCIEICGSTKISYQDVSLDLTPPWR 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
            +T+ E       ID      + ++    ++ L     G+ V    D+   + +    +K
Sbjct: 319 RVTMQELVLEATGIDFDNFDGDQEKASSEMINL-----GLEVPSTADSVGRLMNEAFEQK 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EPN  +   T +  YP   S LA  +       +RFEL+    E  NA  EL+DPI+QR
Sbjct: 374 VEPN--LIQPTFVIDYPIDISPLARKHRCKEDMVERFELFIAGRETANAFSELIDPIDQR 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R   +   K +   E + +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 432 ERLLAQQIRKNEGDIEAHSLDEDFLNALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 491

Query: 345 TPFSQSN 351
            P  + +
Sbjct: 492 FPLLRPD 498


>gi|296231610|ref|XP_002761205.1| PREDICTED: lysyl-tRNA synthetase isoform 1 [Callithrix jacchus]
          Length = 625

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 238 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFITRSKIITYIRSFMDELGFLEIETP 297

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 298 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 353

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 354 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGGYKVTYHPDGPEGQAYEI 413

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 414 DFTPPFRRISMIEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 473

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 474 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 531

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 532 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 591

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 592 IKEVLLFPAMKPEDKK 607


>gi|289548164|ref|YP_003473152.1| lysyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181781|gb|ADC89025.1| lysyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 569

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 160/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +    +D    YR+R             LL R+ + + +R +     F+E+++ 
Sbjct: 214 LHPLPEKWHGLKDVEVRYRQRYLDLIANPKTREILLLRSRVITEVRRFLESKGFVEVETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ       + + F T     +++ + LYL+ +PE   K+L+  G  K++     +RN 
Sbjct: 274 ILQPVASGA-NAKPFVT---YHNYLEQNLYLRIAPELYLKRLIVGGLLKVYELGKNFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     +              ++Q    +      
Sbjct: 330 GVDTTHNPEFTMVEFYCAYWDYKDLMAFTEELFTHILTEVMGGLTITYQGRLLDFTPPYR 389

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                +        D    L      D   +   A   GI  A   T + +  +I    +
Sbjct: 390 VYRYFDLLKEKTGKDKDFFLR-----DEEGVRKLALDIGIPNAEKLTHAKLIDKIFDRLV 444

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  +PA  S LA  +  DP   +RFEL+    EL NA  EL DPIEQR 
Sbjct: 445 EEE--LWGPCFVIDFPALLSPLAKRHREDPDLVERFELFVAGSELANAYSELNDPIEQRE 502

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++EK+    E   +DEDF+  L   MP ++G  +G DRLVM++   ++I EVI  
Sbjct: 503 RFLQQLREKEMGDEEAMELDEDFVKALEYGMPPTAGEGIGIDRLVMILADVDSIREVILF 562

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 563 PALRRRE 569


>gi|254251974|ref|ZP_04945292.1| Lysyl-tRNA synthetase (class II) [Burkholderia dolosa AUO158]
 gi|124894583|gb|EAY68463.1| Lysyl-tRNA synthetase (class II) [Burkholderia dolosa AUO158]
          Length = 508

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  +  F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMSDADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAQPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIQKYA-----PQYTDRQLSDDAYLRNELKRLGVDVTQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAEAQLWEPTFIIDYPVEVSPLARASDTVPGITERFELFITGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|190150137|ref|YP_001968662.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307263473|ref|ZP_07545088.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|238692391|sp|B3H1E8|SYK_ACTP7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189915268|gb|ACE61520.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306871116|gb|EFN02845.1| Lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 500

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     +++  YR+R              + R+ + S +R++F+E  FIE+++ 
Sbjct: 146 LRPLPNKVQGLTDQETRYRQRYLDLISNEESRRTFMIRSKMVSGIRQFFLEKDFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-AKPFITH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++       +     +     E
Sbjct: 262 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLAIDILGTTTVPYGEYVFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y N      +   D          A+  GI +        + + I  E  
Sbjct: 322 RITMHDAIVKYGN-----GITREDLDSFEKSVEIAKGLGIEIQKSWGLGSVVNAIFEEVA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 377 EHQ--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E    DEDF+  L   +P ++G  +G DRL M+   A +I +VI  
Sbjct: 435 RFDAQVAAKDAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMIFANAPSIRDVILF 494

Query: 346 PFSQ 349
           P  +
Sbjct: 495 PAMR 498


>gi|294102359|ref|YP_003554217.1| lysyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293617339|gb|ADE57493.1| lysyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 506

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 169/365 (46%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR+ I +S+R+  +++  +E+++ 
Sbjct: 153 LRPLPEKWHGLKDTEVRYRQRYLDLMVNTDVRDTFRKRSDIIASMRKTLIDHGTLEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L +  G   + R F T     + +   +YL+ + E   K+L+     ++F     +RN 
Sbjct: 213 ILSFLAGGA-NARPFQT---YHNALDANMYLRIATELYLKRLVVGMFGRVFEIGKNFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
               +H PEFT++E Y A+  Y  +M     ++R AA   +  + ++Q +  +       
Sbjct: 269 GIDTMHNPEFTLMEVYWAYADYSDMMDLTEELVRNAALAVDGLVVNYQGIELDFSKPFRR 328

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +++      Y  ID  T   + +          A + G+ +   ++   + + +    +E
Sbjct: 329 VSMLNLVKEYTGIDFKTIKTDEE------ARKIANEKGVELKGSESRFAVLNEVFEAYVE 382

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA   P DP +T RFEL+ C  E+ NA  EL DP++QR R
Sbjct: 383 DK--LVQPTFVIGHPTEISPLAKRDPEDPDYTHRFELFICGSEVANAYSELNDPLDQRER 440

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++++K+    E +  DEDF+  +   +P + G+ +G DRLVM +T + +I +VI  P
Sbjct: 441 FLDQLRKKEAGDEEAHVFDEDFINAIECGLPPTGGLGIGIDRLVMFLTDSRSIRDVILFP 500

Query: 347 FSQSN 351
             +  
Sbjct: 501 AMRPK 505


>gi|134078916|emb|CAK48307.1| unnamed protein product [Aspergillus niger]
          Length = 618

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 86/372 (23%), Positives = 158/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H IPS+ +   +++  +R+R              + R+ I   +R +F    F+E+++ 
Sbjct: 214 LHAIPSEHFGLQDKEQRFRQRYLDLIMNDKSRNVFVTRSKIVRYIRNFFDNRDFVEVETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 274 MMNAIAGGAT-AKPFVTH---HNDLDMNLFMRVAPELYLKMLIVGGLERVYELGRQFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     ++    +       +  +       N N 
Sbjct: 330 GIDLTHNPEFTTCEFYWAYADVYDVMNLTEELVSGLVKHITGGYETTFHTQSGETYNVNW 389

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    + +  A                       L    ++ G+  +   T + +  ++
Sbjct: 390 KAPWRRVEMIPALEEATGEKFPPGDQLHTAETGEFLKRVLKKTGVECSPPMTNARMLDKL 449

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +  +    +RFE + C  E+ NA  EL DP
Sbjct: 450 VGEFIEETCV--NPTFITGHPQMMSPLAKYHRQNVGLCERFEAFVCKKEIVNAYTELNDP 507

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 508 FDQRLRFEEQARQKDQGDDEAQIIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 567

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 568 EVLAFPFMKEDK 579


>gi|116071683|ref|ZP_01468951.1| lysyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065306|gb|EAU71064.1| lysyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 502

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 160/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R ++ S +R +  E QF+EI++ 
Sbjct: 138 LQPLPDKWHGLADVEKRYRQRYLDLIVSPQSRETFRRRALLVSGIRRWLDERQFLEIETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+L+  G E+++     +RN 
Sbjct: 198 VLQSEAGGA-DARPFITH---HNTLDLPLYLRIATELHLKRLVVGGFERVYELGRIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M+   ++I     +V       +Q  + +      
Sbjct: 254 GMSTRHNPEFTSVEVYQAYSDYIGMMELTESMIAEVCQQVCGGTHIHYQGTDIDLTPPWR 313

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
             T+ E       ++            R       + AG+ V    D+   + +    ++
Sbjct: 314 RATMHELVEEATGLNFEAF------TTRAQAAEAMEAAGLEVPGAADSVGRLLNEAFEQR 367

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E N  +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL+DP++QR
Sbjct: 368 VEAN--LIQPTFVTDYPIEISPLARKHRSKPGLVERFELFIVGRETANAFSELIDPVDQR 425

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   K     E   +DEDF+  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 426 QRLEAQQARKAAGDLEAQGLDEDFVHALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 485

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 486 FPLMRPE 492


>gi|153951744|ref|YP_001398557.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166229803|sp|A7H4X7|SYK_CAMJD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|152939190|gb|ABS43931.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 501

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 158/368 (42%), Gaps = 27/368 (7%)

Query: 3   QIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R              L R+ + S +R +F    F+E+++  +
Sbjct: 142 PLPEKYHGLTDIEQRYRKRYVDMIMNAEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMM 201

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN   
Sbjct: 202 HPIAGGA-NAKPFVT---FHNSLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGM 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A+ +Y+ LM     +     +  N  K   F     +     E I
Sbjct: 258 DLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLDKLNLGKTIEFDGKMIDFSKPFERI 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T  +A  +Y  +D           D+  +  + +  G           + + +    +E 
Sbjct: 318 TYKDALCKYGGLDRD------LIEDKEKILAKLKTDGFEANEKLELGHLQAELFDNYVEE 371

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L+     + +  +RFEL+ C  EL N  +EL DP++Q  RF
Sbjct: 372 K--LINPTFVSDFPISISPLSRRSDENSQIAERFELFICGRELANGFNELNDPLDQYERF 429

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+++ K     E   +DEDF+  L   MP ++G  +G DRLVML+T   +I +VI  P 
Sbjct: 430 LKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPA 489

Query: 348 SQSNQEEI 355
            +  + E+
Sbjct: 490 MRPLKSEL 497


>gi|70991613|ref|XP_750655.1| lysyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66848288|gb|EAL88617.1| lysyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159124215|gb|EDP49333.1| lysyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 605

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 88/372 (23%), Positives = 157/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H IPS+ +   +++  +R+R              + R+ I   +R +F    FIE+++ 
Sbjct: 214 LHAIPSEHYGFQDKEQRFRQRYLDLIMNERSRNVFVTRSKIVRYVRNFFDSRDFIEVETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 274 MMNAIAGGAT-AKPFITH---HNDLDMNLFMRVAPELYLKMLIVGGLERVYELGRQFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     +I    +       +  +       N N 
Sbjct: 330 GIDLTHNPEFTTCEFYWAYADVYDVMNLTEELISGLVKHVTGGYETTFHTQSGEVYNVNW 389

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    + +  A                       L    ++ G+  +   T + +  ++
Sbjct: 390 KAPWRRVEMIPALEEATGEKFPPGDQLHTAETGEFLKRVLKKTGVECSPPLTNARMLDKL 449

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +       +RFE + C  E+ NA  EL DP
Sbjct: 450 VGEFIEETCV--NPTFITGHPQMMSPLAKYHRQHAGLCERFEAFVCKKEIVNAYTELNDP 507

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 508 FDQRLRFEEQARQKDQGDDEAQLIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 567

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 568 EVLAFPFMKEDK 579


>gi|260584307|ref|ZP_05852054.1| lysine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157825|gb|EEW92894.1| lysine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 501

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 162/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              + R+ I   +R Y     ++E+++ 
Sbjct: 147 LRPLPDKYHGLTNVEQQYRQRYLDLISNRDSMDRFVTRSKIIREIRHYLDSRDYLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LY++ +PE   K+L+  G E+++     +RN 
Sbjct: 207 VLHTLAGGA-NARPFITH---HNALDMELYMRIAPELHLKRLVVGGMERVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y+ +M     I+   A+ V  +    +        +  +
Sbjct: 263 GIDTTHNPEFTSIEIYTAYTDYQDVMDLTEGIVSSVAQEVLGKTKVPYGEYEVELKAPWK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    + +            A++ G++V    T+  + +      +
Sbjct: 323 RVHMVDAIKEVTGVDFWVEMTD------EEARAIAKEKGVKVEDSMTYGHVVNEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFE + C  E  N   EL DPI+QR 
Sbjct: 377 EET--LIQPTFIYGHPVAVSPLARKNDEDPRFTDRFECFICTKEYANGFTELTDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++EK+   +E +P+DEDF+  L   +  + G+ +G DRLVML+T + +I  V+  
Sbjct: 435 RFMKQVEEKETGNDEAHPLDEDFVQALEYGLSPTGGVGIGIDRLVMLLTNSQSIRNVLLF 494

Query: 346 PFSQSN 351
           P  +  
Sbjct: 495 PTMKHQ 500


>gi|237747767|ref|ZP_04578247.1| lysyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229379129|gb|EEO29220.1| lysyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 511

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 156/365 (42%), Gaps = 26/365 (7%)

Query: 2   HQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     +++  YR+R                R    +S+R +  +N F+E+++  
Sbjct: 157 RPLPDKFHGLSDQELKYRQRYVDLIMSEETRKTFKARTAAIASIRRFMGDNGFMEVETPM 216

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L   PG     + F T     + +   ++++ +PE   K+LL  G E++F     +RN  
Sbjct: 217 LHAIPGGAA-AKPFIT---YHNALDMQMFMRIAPELYLKRLLVGGFERVFELNRNFRNEG 272

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPEY 167
               H PEFTM+E+Y A+  Y+ LM     +IR    +     + ++Q    +       
Sbjct: 273 VSPRHNPEFTMMEFYAAYVDYKWLMDFTETVIRQAVVDTYGTPVITYQGKELDFSKPFRR 332

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            T+ EA ++YA              D   L  + ++ G+++        +   +  E  E
Sbjct: 333 FTILEAISKYA-----PHYTLEQLNDADFLRAELKKFGVKLLPTAGVGALQLALFEETAE 387

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA         T+RFEL+    E+ N   EL DP +Q  R
Sbjct: 388 AK--LWEPTYIIDYPVEVSPLARASDTREGITERFELFMVGREIANGFSELNDPEDQSAR 445

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F K+++ K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI  P
Sbjct: 446 FMKQVEAKDAGDEEAMYYDSDYIRALEYGMPPAGGCGIGIDRLVMLLTDSPNIRDVILFP 505

Query: 347 FSQSN 351
             +  
Sbjct: 506 HMRRE 510


>gi|298713460|emb|CBJ27015.1| Lysyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 710

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 162/373 (43%), Gaps = 27/373 (7%)

Query: 3   QIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +    +D    YR+R                R  + S +R    ++ F+EI++  L
Sbjct: 332 PLPDKFHGLKDTEKRYRQRHVDMMVNPAVRDVFRMRAKVTSFIRRSLDDDDFLEIETPVL 391

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G     + F+T     + +  PL L+ + E   K+L+  G ++++     +RN   
Sbjct: 392 QSIAGGAA-AKPFATH---HNVLDMPLTLRIATELHLKRLVVGGFDRVYELGRIFRNEGI 447

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI------FSFQNVNCNPFS 163
              H PEFT +E Y+A+  Y  +M+    ++  AA                   + +  +
Sbjct: 448 STRHNPEFTSVEVYQAYADYHDMMELTERLVAGAASEVLGTTAVSGGEEEGAPPDVDLKA 507

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRIL 222
               +T+ +       +D      +            A +AG+  A   +T   I +   
Sbjct: 508 PWRRVTMNDLVREKIGLDFEALDMSDPAAALATARETALKAGVHKAAGLETPGYILNECF 567

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
            E  E    +   TI+  +P   S LA  +   P +T+RFE++    E+ NA  EL DP+
Sbjct: 568 EELCEA--DLIQPTIVMDHPIEVSPLAKPHRTKPGYTERFEVFVQGREMANAFSELTDPV 625

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           +QR+RFE +  +K     E   +D+DFL  L   MP ++G+ +G DRL+ML+ GA +I +
Sbjct: 626 DQRNRFELQAAKKAAGDEEACDVDDDFLDALERGMPPTAGLGIGIDRLIMLLAGATSIRD 685

Query: 342 VIWTPFSQSNQEE 354
           VI  P  ++   E
Sbjct: 686 VIAFPLLRAENSE 698


>gi|227498560|ref|ZP_03928704.1| lysyl-tRNA synthetase class II [Acidaminococcus sp. D21]
 gi|226904016|gb|EEH89934.1| lysyl-tRNA synthetase class II [Acidaminococcus sp. D21]
          Length = 657

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 96/373 (25%), Positives = 165/373 (44%), Gaps = 31/373 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR  I  S+R       ++E+++ 
Sbjct: 149 LKPLPEKWHGLKDKEIRYRQRYVDLIVNPEVRDTFVKRTEIIKSIRNILDNEGYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F T     + +   LYL+ + E + K+L+  G E+++     +RN 
Sbjct: 209 VLNTISGGAT-ARPFVTH---HNALDIDLYLRIATELNLKRLIVGGLERVYEIGRIFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y+ +M     ++   A+ V      ++Q    +      
Sbjct: 265 GMDIKHNPEFTSIELYEAYGDYQTMMDITEKLVSETAQRVLGTMKITYQGKEIDLTPPWP 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +++  D           D       A  A + +        I      E +
Sbjct: 325 RMTMVEAVKKFSGYDFTGVR------DVETARKLAADANVEIQPTFGPGKILEAFFDEFV 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   T +  +P   S LA    ADP  T RFE +    E+CN   EL DPI+Q+ 
Sbjct: 379 EKN--LIQPTFIMGHPKEISPLAKSSLADPEVTDRFEGFINGSEICNGFTELNDPIDQKE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFEK+++E+    +E   +DEDF+  L   +P + G+ +G DRLVML+T + +I +V+  
Sbjct: 437 RFEKQVEERNNGDDEAGMMDEDFINALMHGLPPTGGLGIGIDRLVMLLTNSASIRDVLLF 496

Query: 346 PFSQS----NQEE 354
           P  +      ++E
Sbjct: 497 PTMKPLGLEKKDE 509


>gi|242310600|ref|ZP_04809755.1| lysyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522998|gb|EEQ62864.1| lysyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 497

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 160/368 (43%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              + R+ I S +R +F EN F+E+++ 
Sbjct: 142 ISPLPEKYHGLVDIEMRYRQRYLDLIMNKEVRDTFVLRSKIVSCVRRFFEENGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG   + + F T     + +    YL+ +PE   K+L+  G E +F     +RN 
Sbjct: 202 MMHPIPGGA-NAKPFVT---FHNALNVERYLRIAPELYLKRLVVGGFEAVFEINRNFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E+Y A++ Y+ L+K    +        N       N     FSE   
Sbjct: 258 GMDHSHNPEFTMIEFYWAYKDYKDLIKITKALFDYLFAQLNLPKILKFNEKEIDFSEFRE 317

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I+  ++      I            DR  LY       +++        + S      +E
Sbjct: 318 ISYLDSLVEIGGI------PREVATDRDKLYDYLIANNVKLESKMELGKLQSEAFDAFVE 371

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P    RFEL+    E+ N   EL DP++Q  R
Sbjct: 372 DK--LINPTFITDFPIVISPLARRNDENPEIADRFELFIGGSEIANGFSELNDPLDQYER 429

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F++++  K+    E   +DED++  L   MP ++G  +G DRLVML+TG N I +VI  P
Sbjct: 430 FKEQVIAKEAGDEEAQYMDEDYITALSYGMPPTAGEGIGIDRLVMLLTGHNIIKDVILFP 489

Query: 347 FSQSNQEE 354
             +  +++
Sbjct: 490 ALKPQKKD 497


>gi|197097424|ref|NP_001127155.1| lysyl-tRNA synthetase [Pongo abelii]
 gi|55725250|emb|CAH89490.1| hypothetical protein [Pongo abelii]
          Length = 625

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 238 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 297

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 298 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKILVVGGIDRVYEIGRQFRNE 353

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +         + 
Sbjct: 354 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDV 413

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + E   +   + L  T     +  R +L        +      T + +  
Sbjct: 414 DFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 473

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 474 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 531

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 532 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 591

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 592 IKEVLLFPAMKPEDKK 607


>gi|238853553|ref|ZP_04643925.1| lysine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282852632|ref|ZP_06261974.1| lysine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|238833849|gb|EEQ26114.1| lysine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282556374|gb|EFB61994.1| lysine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 513

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++    +D    YR+R              + R  I  ++R Y  +  F+E+++ 
Sbjct: 142 LRPLPNKWDGLKDVEQIYRQRYLDLITNHESYMRFVHRTQIIQAIRNYLNKQDFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+  G E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGGMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GVDTRHNPEFTELETYAAYWDFHDVMDEAEEIIRAAAKVVSPDGKINYQGTDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    + +            A++ GI          + +    E  
Sbjct: 318 RVHMVDLIKEKTGVDFWKEMTD------EEAKKIAEEHGIHTEPFWKVGHVINAFFDEFC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++   +E  NA  EL DP++QRH
Sbjct: 372 EKT--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIFILGMEYGNAFSELNDPVDQRH 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++M+E++   +E   IDED++  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEEQMEEREAGNDEADMIDEDYIRAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPEKVE 498


>gi|195448202|ref|XP_002071554.1| GK25859 [Drosophila willistoni]
 gi|194167639|gb|EDW82540.1| GK25859 [Drosophila willistoni]
          Length = 578

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 84/375 (22%), Positives = 157/375 (41%), Gaps = 28/375 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R                R  I S +R++     F+EI++ 
Sbjct: 194 LHMLPHLHFGLKDKETRFRQRYLDLILNNKVRETFQIRAKIISYVRQFLDRLGFLEIETP 253

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+++ +PE   K L+  G ++++     +RN 
Sbjct: 254 MMNMIAGGAT-AKPFITH---HNDLKMDLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNE 309

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--------NC 159
                H PEFT  E+Y A+  Y  +M     ++    +          +           
Sbjct: 310 GIDLTHNPEFTTCEFYMAYADYADVMDITEQMVSGMVKAIRGSYKVTYHPDGPDGPALEL 369

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +       +   +            L  Q  +  +      T + +  
Sbjct: 370 DFTPPFKRVSMIKTLEEKLQVKFPSADTFNTPETNQFLSQQCIKHQVECPAPRTTARLLD 429

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 430 KLVGEFIEEFC--INPTFICEHPQIMSPLAKYHRSTPGLTERFELFVAKKEICNAYTELN 487

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 488 DPVVQRERFEQQANDKAAGDDEAQMVDENFCTALEYGLPPTGGFGMGIDRLTMFLTDSNN 547

Query: 339 INEVIWTPFSQSNQE 353
           I EV+  P  +  ++
Sbjct: 548 IKEVLLFPAMKPEEQ 562


>gi|229815844|ref|ZP_04446168.1| hypothetical protein COLINT_02897 [Collinsella intestinalis DSM
           13280]
 gi|229808539|gb|EEP44317.1| hypothetical protein COLINT_02897 [Collinsella intestinalis DSM
           13280]
          Length = 661

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 27/366 (7%)

Query: 2   HQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     +++  YR+R               KR+ I S+ R Y  +N ++E+++  
Sbjct: 148 RPLPEKFHGLSDKETRYRQRYVDLIVNEDVRETFRKRSAIVSAFRRYMEDNGYMEVETPI 207

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  T  + F T     + + +  YL+ + E   K+LL  G E++F     +RN  
Sbjct: 208 LQSIQGGAT-AKPFITHF---NALNQENYLRIATELHLKRLLVGGYERVFEIGRIFRNEG 263

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEY 167
               H PEFT +E YRA+   E + +    +I+ AA     + +  +Q    + FS    
Sbjct: 264 MDLTHNPEFTTMEAYRAYSDLEGMKELAEGVIKAAARAIGLEGMIDYQGQAIDLFSPWPS 323

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
             + +  +                     L     +  I    + T   + + +  E  E
Sbjct: 324 RPMTDVVSEVLG------RTITIDTPVEELRAACDEHDIEYKPEWTAGKLIAELFDELGE 377

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA  +  DPR T RFEL+    E  NA  EL DP++Q  R
Sbjct: 378 A--ILINPTFVVDYPVEVSPLAKRHEDDPRLTHRFELFIAAHEYANAFSELNDPVDQAER 435

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  +M+EK    +E    DED++  L   MP + GI +G DR+VML+T + +I +V+  P
Sbjct: 436 FAAQMEEKAGGDDEAMEYDEDYVRALEYGMPPAGGIGIGIDRVVMLLTNSTSIRDVLLFP 495

Query: 347 FSQSNQ 352
             +  +
Sbjct: 496 HMKPEK 501


>gi|78187216|ref|YP_375259.1| lysyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|123771051|sp|Q3B365|SYK_PELLD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78167118|gb|ABB24216.1| Lysyl-tRNA synthetase, class-2 [Chlorobium luteolum DSM 273]
          Length = 501

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 101/377 (26%), Positives = 172/377 (45%), Gaps = 39/377 (10%)

Query: 1   MHQIPSQP-------------WWNRDFHYRRRPF-----------LLKRNMIQSSLREYF 36
           +  IP                + +R+  YR+R              +KR+ I S +R +F
Sbjct: 138 LRPIPVAKEKEVEGEKVVFDAFADRELRYRQRYVDLIVNPEVRSTFIKRSAIVSHIRSFF 197

Query: 37  VENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
               ++E+++  LQ   G     R F+T     + +   LYL+ + E   K+L+  G + 
Sbjct: 198 TSQGWLEVETPILQPIYGGAA-ARPFTTH---HNALDMQLYLRIANELYLKRLIVGGFDG 253

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQ 155
           +F FA  +RN      H PEFT +E Y A++ Y+ +M+    + +  A   N   + +F 
Sbjct: 254 VFEFAKDFRNEGIDRFHNPEFTQVELYVAYKDYDWMMRLVEELFQQTAIAVNGTAMTTFL 313

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
               +  +    +T+A++   Y   ++       +      L   A+  G+ +       
Sbjct: 314 GHEISLEAPFRRLTIADSIREYTGAEI-------EGKTETELRNLAKDLGLELDPKIGSG 366

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            I   I  E +EP   +   T +  YP   S LA  + + P   +RFEL A   E+CN+ 
Sbjct: 367 KIIDEIFGEFVEPK--LIQPTFITDYPTEMSPLAKPHRSKPGLVERFELIAGGKEICNSF 424

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP+ QR R E++   +++  +E   +DEDFL  L   MP ++G+ +G DRLVML+T
Sbjct: 425 SELNDPVIQRQRLEEQASLRQRGDDEAMVVDEDFLRALEYGMPPTAGLGIGIDRLVMLIT 484

Query: 335 GANNINEVIWTPFSQSN 351
           G  +I +VI+ P  +  
Sbjct: 485 GEESIRDVIFFPHLKPE 501


>gi|85059967|ref|YP_455669.1| lysyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123766398|sp|Q2NRG1|SYK_SODGM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|84780487|dbj|BAE75264.1| lysyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 506

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 160/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +     +++  YR+R                R+ I + +R + ++N F+E+++ 
Sbjct: 151 MRPLPDKFHGLADQETRYRQRYLDLIANDESRQTFKVRSRIMAEIRRFMMDNDFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 211 MMQTIPGGAA-ARPFITH---HNALGIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L+     + R     V    +    +   +      
Sbjct: 267 GLSPRHNPEFTMMELYMAYADYRDLIVLVETLFRTLTQRVLGSSVVHNGDQTFDFGKPFT 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA   Y        LD     D       A+  GI+V        + + +  E  
Sbjct: 327 QMTMKEAICHYRPETRPEALD-----DMASATAIAESLGIKVDKSWGLGRVQTEVFEETA 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q  
Sbjct: 382 ESH--LIQPTFITAYPAEVSPLARRNDDNPFFTDRFEFFIGGREIGNGFSELNDAEDQAA 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ Q K    +E    DED++  L   +P ++G+ +G DRL+ML+T ++ I +VI  
Sbjct: 440 RFAEQAQAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRLMMLLTNSHTIRDVILF 499

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 500 PALRPQK 506


>gi|326803025|ref|YP_004320843.1| lysine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651480|gb|AEA01663.1| lysine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 500

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 161/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I S +R +  +  ++E+++ 
Sbjct: 147 LRPLPDKYHGLQDKEQIYRQRHLDLITNRESYDRFVTRSKIISEIRRFLDQRGYLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNIPGGA-NARPFVTH---HNALDIDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y A+     +M     +    A +V       + +   +   +  
Sbjct: 263 GIDHTHNPEFTLLELYTAYSDMWDVMDLVEELYHHIASQVVGSTTIPYGDHQLDFSGQWR 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    + +            A+   + V   D +  + +      +
Sbjct: 323 RVHMVDAIKEATGVDFWQEMTD------EEARQLAKDHHVEVKGTDDFGKVVNEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFE +    E  NA  EL DPI+QR 
Sbjct: 377 EET--LIQPTFVYGHPKSISPLARANEEDSRFTDRFEAFIAGAEAGNAFTELTDPIDQRQ 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E++   +E   +DEDF+  L   MP + G+ +G DRLVM+ T +++I +++  
Sbjct: 435 RFEAQVKERELGDDEAQHMDEDFVEALETGMPPTGGLGIGIDRLVMIFTNSDSIRDILLF 494

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 495 PTMRNK 500


>gi|166030715|ref|ZP_02233544.1| hypothetical protein DORFOR_00389 [Dorea formicigenerans ATCC
           27755]
 gi|166029507|gb|EDR48264.1| hypothetical protein DORFOR_00389 [Dorea formicigenerans ATCC
           27755]
          Length = 647

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I S++R Y     F+E+++ 
Sbjct: 142 LQILPEKFHGLTNTDTRYRQRYVDLIVNPEVRDTFIKRSRIISAVRRYLDGQGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + L L+ S E   K+L+  G E+++     +RN 
Sbjct: 202 MLVANAGGAA-ARPFETHF---NALNEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V       ++ +  +     E
Sbjct: 258 GLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGTTKIVYKGIEMDLGEPFE 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D        +          A++  +         DI +    E +
Sbjct: 318 RITMVDAVKKYAGVDWN------EVETLEQARELAKEHNLEFEERHKKGDILNLFFEEYV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 372 EEH--LLQPTFVMDHPVEISPLTKKKPENPNYVERFEFFMNGWEMANAYSELNDPIDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +       E    DEDFL  L   MP + GI  G DR+ ML+TGA  I +V+  
Sbjct: 430 RFAAQEEAFAAGDEEANHTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTGAEAIRDVLLF 489

Query: 346 PFSQS 350
           P  +S
Sbjct: 490 PTMKS 494


>gi|332525509|ref|ZP_08401667.1| lysyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332108776|gb|EGJ10000.1| lysyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 492

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 163/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   SS+R+Y VE+ F+E+++ 
Sbjct: 138 LRPLPDKFHGMTDQEQKYRQRYVDLMTDDAARSRFVARSKAVSSIRQYMVEHGFLEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + ++L+ +PE   K+LL  G E++F     +RN 
Sbjct: 198 MLHPIPGGA-NAKPFVTH---HNALDQEMFLRIAPELYLKRLLVGGFERVFEINRNFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ ++  LM     ++R AA  A      S+     +      
Sbjct: 254 GISVRHNPEFTMMEFYAAYWTHHDLMDFTEQVLRHAARAATGSATLSYAGREVDLAQPFA 313

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V  +   +A +         +  D   L+ + +  G       T +++   +    +
Sbjct: 314 RLSVRNSLVVHAGV------SESEADDAAALHARLKALGEEPPAHWTLAELQFGLFEAAV 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    ++P  T+RFEL+    E  N   EL D  +Q  
Sbjct: 368 EDK--LWQPTFIIDYPVEVSPLARASDSNPSITERFELFITGREYANGFSELNDAEDQAA 425

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K     E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI  
Sbjct: 426 RFQAQVANKDAGDEEAMYYDADFIRALEYGMPPAGGCGIGIDRLIMLLTDSPSIRDVILF 485

Query: 346 PFSQSN 351
           P  +  
Sbjct: 486 PALRRE 491


>gi|120597726|ref|YP_962300.1| lysyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146294137|ref|YP_001184561.1| lysyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166229828|sp|A4Y9X9|SYK_SHEPC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230589|sp|A1RGF1|SYK_SHESW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|120557819|gb|ABM23746.1| lysyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145565827|gb|ABP76762.1| lysyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|319427480|gb|ADV55554.1| lysyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 500

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + +++R + ++ +F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVVAAIRNFMIKKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A          +     +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSIAIELLGSAQMPYGEHTVDFGGPYA 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA  +Y   +     +      D   +   A   GI++    T   +   I  E 
Sbjct: 315 RLSMLEAIQKYNPDNATIQAMTYEQVKDLEFMRELAISLGIKIEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AE--WQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 SRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|317032210|ref|XP_001394242.2| lysine--tRNA ligase KRS1 [Aspergillus niger CBS 513.88]
          Length = 604

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 86/372 (23%), Positives = 158/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H IPS+ +   +++  +R+R              + R+ I   +R +F    F+E+++ 
Sbjct: 214 LHAIPSEHFGLQDKEQRFRQRYLDLIMNDKSRNVFVTRSKIVRYIRNFFDNRDFVEVETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 274 MMNAIAGGAT-AKPFVTH---HNDLDMNLFMRVAPELYLKMLIVGGLERVYELGRQFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     ++    +       +  +       N N 
Sbjct: 330 GIDLTHNPEFTTCEFYWAYADVYDVMNLTEELVSGLVKHITGGYETTFHTQSGETYNVNW 389

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    + +  A                       L    ++ G+  +   T + +  ++
Sbjct: 390 KAPWRRVEMIPALEEATGEKFPPGDQLHTAETGEFLKRVLKKTGVECSPPMTNARMLDKL 449

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +  +    +RFE + C  E+ NA  EL DP
Sbjct: 450 VGEFIEETCV--NPTFITGHPQMMSPLAKYHRQNVGLCERFEAFVCKKEIVNAYTELNDP 507

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 508 FDQRLRFEEQARQKDQGDDEAQIIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 567

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 568 EVLAFPFMKEDK 579


>gi|297284495|ref|XP_001104312.2| PREDICTED: lysyl-tRNA synthetase isoform 1 [Macaca mulatta]
          Length = 625

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ + + +R +  E  F+EI++ 
Sbjct: 238 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKMVTYIRSFLDELGFLEIETP 297

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 298 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKILVVGGIDRVYEIGRQFRNE 353

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  +M+    ++    +          +         + 
Sbjct: 354 GIDLTHNPEFTTCEFYMAYADYHDVMEITEKMVSGMVKHITGSYKITYHPDGPEGQAYDI 413

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 414 DFTPPFRRISMIEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 473

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 474 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 531

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P + G  MG DR+ M +T +NN
Sbjct: 532 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTGGFGMGLDRVAMFLTDSNN 591

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 592 IKEVLLFPAMKPEDKK 607


>gi|86151307|ref|ZP_01069522.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153627|ref|ZP_01071830.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|157414696|ref|YP_001481952.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|315123958|ref|YP_004065962.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|172047060|sp|A8FKI8|SYK_CAMJ8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|85841654|gb|EAQ58901.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85842588|gb|EAQ59800.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|157385660|gb|ABV51975.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747336|gb|ADN90606.1| Lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315017680|gb|ADT65773.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315932664|gb|EFV11594.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 501

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 158/368 (42%), Gaps = 27/368 (7%)

Query: 3   QIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R              L R+ + S +R +F    F+E+++  +
Sbjct: 142 PLPEKYHGLTDIEQRYRKRYVDMIMNAEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMM 201

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN   
Sbjct: 202 HPIAGGA-NAKPFVT---FHNSLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGM 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A+ +Y+ LM     +     +  N  K   F     +     E I
Sbjct: 258 DLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLDKLNLGKTIEFDGKMIDFSKPFERI 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T  +A  +Y  +D           D+  +  + +  G           + + +    +E 
Sbjct: 318 TYKDALCKYGGLDRD------LIEDKEKILTKLKVDGFEANEKLELGHLQAELFDNYVEE 371

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L+     D +  +RFEL+ C  EL N  +EL DP++Q  RF
Sbjct: 372 K--LINPTFVIDFPISISPLSRRSDEDSQIAERFELFICGRELANGFNELNDPLDQYERF 429

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+++ K     E   +DEDF+  L   MP ++G  +G DRLVML+T   +I +VI  P 
Sbjct: 430 LKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPA 489

Query: 348 SQSNQEEI 355
            +  + E+
Sbjct: 490 MRPLKSEL 497


>gi|258647028|ref|ZP_05734497.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260404469|gb|EEW98016.1| lysine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 497

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 169/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR  +  ++R ++  + F+E+++ 
Sbjct: 135 LRPLPEKWHGLTDKEQRYRQRYLDLIANPDVRKTFIKRANMLQAIRNWYTAHGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + R F T     + +   +YL+ +PE   K+LL  G E+IF     +RN 
Sbjct: 195 VLQPLYGGA-NARPFMTHF---NALDMTMYLRIAPELYLKRLLVGGYERIFEITRNFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   + ++     I+   A        F+++    +      
Sbjct: 251 GMDTRHNPEFTAIETYQAYGDIDDVIDQTEQIVAACAMASYGTTKFTYEGTEIDVAGPWP 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+AEA  +Y   D                     +  +     D +  + +    + +
Sbjct: 311 RLTMAEAVKKYTGEDFDAC------KTIEEARAICDRLHVEYGEFDGFGKLLAAAFDDYV 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +     +  +P   S L+ + P DPR+T RFE Y    EL N   EL DP++QR 
Sbjct: 365 EEH--LIQPVHITEHPIEVSPLSKLDPKDPRYTIRFESYIYGRELANGFSELNDPLDQRA 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E++   +E +PIDEDFL  L   MP + G+ +G DRL ML+T +++I +++  
Sbjct: 423 RFEMQVEEREHGDDEAHPIDEDFLTALEYGMPPTGGLGIGLDRLFMLMTNSSSIRDILLF 482

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 483 PAMRPETD 490


>gi|148238513|ref|YP_001223900.1| lysyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166230596|sp|A5GI38|SYK_SYNPW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|147847052|emb|CAK22603.1| Lysyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 489

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 157/367 (42%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R +  S++R +  E +F+EI++ 
Sbjct: 134 LQPLPDKWHGLADVEKRYRQRYLDLIVTPQSRETFRRRALTVSAIRRWLDEREFLEIETP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+L+  G E+++     +RN 
Sbjct: 194 VLQSEAGGA-DARPFITH---HNTLDLPLYLRIATELHLKRLVVGGFERVYELGRIFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +++   ++I     +V      ++Q    +      
Sbjct: 250 GVSTRHNPEFTSVEVYQAYADYLGMIELTESMIASVCEQVCGGTRLTYQGTEIDLTPPWR 309

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
             T+ E       +D     D     +           G+ V    D+   + +      
Sbjct: 310 RATMHELVEEATGLDFTAFADRAAAAEAMTA------KGLPVPDKADSVGRLLNEAFEHA 363

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E N  +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL+DP++QR
Sbjct: 364 VEAN--LIQPTFVLDYPEEISPLARKHRSKPGLVERFELFIVGRETANAFSELIDPVDQR 421

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   +     E   +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 422 GRLEAQQARRAAGDEEAQGVDEDFLQALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 481

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 482 FPLLRPE 488


>gi|238028012|ref|YP_002912243.1| lysyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877206|gb|ACR29539.1| Lysyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 508

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 156/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  + +F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQEMRYRQRYVDLIVTPETRNTFRARTKAIASIRKFMSDAEFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFITH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLARPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIQKYA-----PGYGDAQLADPAFLRTELKRFGVDVGQPAFLNAGLGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAESQLWEPTYIIDYPVEVSPLARASDTVPGITERFELFMTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|229829706|ref|ZP_04455775.1| hypothetical protein GCWU000342_01803 [Shuttleworthia satelles DSM
           14600]
 gi|229791695|gb|EEP27809.1| hypothetical protein GCWU000342_01803 [Shuttleworthia satelles DSM
           14600]
          Length = 648

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 155/367 (42%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R +     F+E+++ 
Sbjct: 139 LQPLPEKFHGLTDTDTRYRQRYVDLIMNPEVKDTFVKRSQIIKEIRNFLDGRDFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F +     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 199 MLVSNAGGAA-ARPFESHY---NALDEDVKLRISLELYLKRLIVGGMERVYEIGRVFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M+   ++ R  A +V      ++Q    +      
Sbjct: 255 GVDTRHNPEFTLMELYQAYTDYNGMMELTESMFRYLAEKVCGSTRITYQGTEIDLGKPFC 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A      ID                   A +  I         DI +    E  
Sbjct: 315 RLTMIDAIREKTGIDFDQV------KTLEEARKLADEHHIAYEPHHKRGDIINLFFEENC 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L      DP   +RFELY    E+CNA  EL DPI+QR 
Sbjct: 369 EES--LIQPTFIMDHPVEISPLTKKSTKDPSKVERFELYIYGREMCNAYSELNDPIDQRE 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++         E    DEDFL  +   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 427 RFAEQDALAAAGDEEANHTDEDFLNAMEIGMPPTGGIGYGIDRLVMLLTDSPAIRDVLLF 486

Query: 346 PFSQSNQ 352
           P  +S++
Sbjct: 487 PTLKSDR 493


>gi|148926492|ref|ZP_01810175.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145844655|gb|EDK21761.1| lysyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 501

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 158/367 (43%), Gaps = 27/367 (7%)

Query: 4   IPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     D    YR+R              L R+ + S +R +F    F+E+++  + 
Sbjct: 143 LPEKYHGLTDIEQRYRKRYVDMIMNVEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMMH 202

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN    
Sbjct: 203 PIAGGA-NAKPFVT---FHNSLGVERFLRIAPELYLKRLIVGGFEAVFEINRCFRNEGMD 258

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYIT 169
             H PEFT +E+Y A+ +Y+ LM     +     +  N  K   F     N     E IT
Sbjct: 259 LTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLDKLNLGKTIEFDGKMINFSKPFERIT 318

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A  +Y  +D           D+  +  + +  G           + + +    +E  
Sbjct: 319 YKDALCKYGGLDRD------LIEDKEKILTKLKADGFEANEKLELGHLQAELFDNYVEEK 372

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  +P   S L+     D +  +RFEL+ C  EL N  +EL DP++Q  RF 
Sbjct: 373 --LINPTFVIDFPISISPLSRRSDEDSQIAERFELFICGRELANGFNELNDPLDQYERFL 430

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           K+++ K     E   +DEDF+  L   MP ++G  +G DRLVML+T   +I +VI  P  
Sbjct: 431 KQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPAM 490

Query: 349 QSNQEEI 355
           +  + E+
Sbjct: 491 RPLKSEL 497


>gi|256090517|ref|XP_002581234.1| lysyl-tRNA synthetase [Schistosoma mansoni]
 gi|238667090|emb|CAZ37473.1| lysyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 634

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 94/373 (25%), Positives = 157/373 (42%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++Q+P   +   +++  +R+R              + R  I + +R +  +  F+E+++ 
Sbjct: 170 LYQLPHMHYGVKDKETRFRQRYLDLLMNEDVRQRFITRARIINYVRRFLDDLGFLEVETP 229

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   LY++ +PE   K L+  G  +++     +RN 
Sbjct: 230 MMNTIAGGAA-AKPFIT---YHNDLNMNLYMRVAPELYLKMLIIGGLNRVYELGRVFRNE 285

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y A+  YE LM    ++I    +          + +         
Sbjct: 286 GIDLTHNPEFTSCEFYMAYADYEDLMTITEDLISGLVKHLFGSYIIKYHPDGAESDEIIV 345

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I   +  A   N  L        +  R      A Q GI      T + +  
Sbjct: 346 DCTPPFKRINFYDDLAAKLNTKLPLPETFETEETRQFFLKIAAQHGIDCPEPKTTARLLD 405

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           ++  E +EP       T L  +P   S LA  + + P  T+RFEL+  + ELCNA  EL 
Sbjct: 406 KLAGEFLEPLCV--NPTFLTCHPCIMSPLAKEHRSRPGLTERFELFMLHKELCNAYTELN 463

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RF ++ ++K     E    DE FL  L   +P ++G  +G DRL M +T  NN
Sbjct: 464 DPVVQRERFLEQAKDKAAGDAEAMVTDEQFLTALGYGLPPTAGWGLGIDRLTMFLTNTNN 523

Query: 339 INEVIWTPFSQSN 351
           I EVI  P  +  
Sbjct: 524 IKEVILFPAMKPE 536


>gi|328712350|ref|XP_003244784.1| PREDICTED: lysyl-tRNA synthetase-like isoform 3 [Acyrthosiphon
           pisum]
          Length = 610

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 87/375 (23%), Positives = 161/375 (42%), Gaps = 30/375 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R  + S +R +     F+EI++ 
Sbjct: 225 LHMLPHMHYGLKDKETRYRQRYLDLIINEHVRNKFIVRAKVISYVRRFLDNLGFLEIETP 284

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 285 MMNMIAGGAT-AKPFITH---HNDLNMDLFMRVAPELYHKMLVVGGIDRVYEIGRQFRNE 340

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------- 157
                H PEFT  E+Y A+  Y  LM+   +++    +          +           
Sbjct: 341 AIDLTHNPEFTTCEFYMAYADYNDLMQITEDLLSGLVKSIYGTYKIKYHPDGVDANTEAV 400

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +     + + +  A     ++ L    +        LL     +  I      T + +
Sbjct: 401 EIDFTPPFKRMYMFPALEEILSVKLPNPTELATVEANKLLDDLCLKHEIECPPPRTSARL 460

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             +++ E +E        T +  +P   S LA  + + P  T+RFEL+    E+CNA  E
Sbjct: 461 LDKLVGEFLEEKC--INPTFICDHPQVMSPLAKWHRSIPGLTERFELFVMKKEVCNAYTE 518

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DP+ QR RFE++ ++K    +E   IDE+F   L   +P ++G  +G DRL M +T +
Sbjct: 519 LNDPMIQRERFEQQAKDKAAGDDEAQLIDENFCTSLEYGLPPTAGWGLGIDRLTMFLTDS 578

Query: 337 NNINEVIWTPFSQSN 351
           NNI EV++ P  + +
Sbjct: 579 NNIKEVLFFPAMKPD 593


>gi|288927864|ref|ZP_06421711.1| lysine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330698|gb|EFC69282.1| lysine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 576

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 94/355 (26%), Positives = 154/355 (43%), Gaps = 26/355 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +  +R+R              LKR  + S++R++F E  + E+++ +LQ   G  T  
Sbjct: 160 DPELRFRQRYVDLVVNEGVKETFLKRAKVISTMRQFFDEAGYTEVETPTLQSIAGGAT-A 218

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F T     + + + ++L+ + E   K+L+  G E ++     +RN      H PEFT+
Sbjct: 219 RPFVTHF---NALNQEMFLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNPEFTL 275

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS-EPEYITVAEAFARYA 178
           +E Y  ++ Y  +M     ++       N K  S  +     F      + + +A     
Sbjct: 276 MELYVQYKDYNWMMSFTERLLETICVAVNGKPESVVDGQVISFKAPYRRLPILDAIKEKT 335

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D        D      +    ++  + +        +   I  E  E        T +
Sbjct: 336 GYD-------LDGKTEEEIRQVCKELKLDIDDTMGKGKLIDEIFGEFCEGQ--FLQPTFI 386

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF ++M+   K 
Sbjct: 387 TDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFVEQMKLADKG 446

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +E   ID+DFL  L   MP +SGI +G DRLVML+TG   I EV+  P  +  +
Sbjct: 447 DDEAMIIDKDFLRSLQYGMPPTSGIGIGIDRLVMLMTGQTAIQEVLLFPQMRPEK 501


>gi|255011239|ref|ZP_05283365.1| lysyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313149051|ref|ZP_07811244.1| lysyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313137818|gb|EFR55178.1| lysyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 575

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 98/359 (27%), Positives = 160/359 (44%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              +KR+ + SS+REYF    ++E+++  LQ   G 
Sbjct: 157 DSFEDPELRYRQRYVDLAVNEGIKDIFMKRSKVYSSMREYFNSKGYMEVETPILQAIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
               R F T     + +  PLY++ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AA-ARPFMTH---HNALDIPLYMRIASELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y A++ Y  +M+    +I     +V         +   N  +    +T+ +A 
Sbjct: 273 EFTCMEIYVAYKDYNWMMEFTEKMIEKICLDVNGTTEVKVGDNIINFKAPYRRVTMLDAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             +   DL          +   +    Q+  + +        +   I  E  E       
Sbjct: 333 KEHTGYDLTGM-------NEAQIREVCQKLNMEIDETMGKGKLIDEIFGEFCEGTY--IQ 383

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L   +  +P  T+RFEL     ELCNA  EL DPI+Q  RFE +M+ 
Sbjct: 384 PTFITDYPIEMSPLTKKHRTNPELTERFELMVNGKELCNAYSELNDPIDQLERFEDQMKL 443

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DF+  L   MP +SG+ +G DRL ML+TG + I EV++ P  +  +
Sbjct: 444 SEKGDDEAMIIDKDFVRALEYGMPPTSGMGIGMDRLTMLMTGQSTIQEVLFFPQMRPEK 502


>gi|189347081|ref|YP_001943610.1| lysyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189341228|gb|ACD90631.1| lysyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 507

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 103/377 (27%), Positives = 170/377 (45%), Gaps = 39/377 (10%)

Query: 1   MHQIPSQP-------------WWNRDFHYRRR-----------PFLLKRNMIQSSLREYF 36
           +  IP                + +++  YR+R              +KR+ I + +R++F
Sbjct: 144 LRPIPVAKEKDIDGQKVVYDAFSDKELRYRQRYVDLIVNPEVRETFIKRSAIVTFMRQFF 203

Query: 37  VENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
               ++E+++  LQ   G     R F+T     + +   LYL+ + E   K+L+  G + 
Sbjct: 204 TGKGWLEVETPILQPIYGGAA-ARPFTTH---HNALDMQLYLRIANELYLKRLIVGGFDG 259

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQ 155
           +F FA  +RN      H PEFT +E Y A++ Y  +M+    ++ R    V      SF 
Sbjct: 260 VFEFAKDFRNEGIDRFHNPEFTQVELYVAYKDYNWMMELVEELLYRTTLSVNGTHTTSFL 319

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
             + +       +T+ +A   Y N+D+          +   L   A+  G+ +       
Sbjct: 320 GNDISLEPPFRRLTIVDAIKEYCNVDVSG-------KNETELRSAAKDLGLELDPKIGAG 372

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            I   I  E +EP   +   T +  YP   S LA  + + P F +RFEL A   ELCN+ 
Sbjct: 373 KIIDEIFGEFVEPK--LIQPTFITDYPTEMSPLAKEHRSKPGFVERFELIAGGKELCNSF 430

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP+ QR R E + + + +   E   +DEDFL  L   MP  +G+ +G DR+VML+T
Sbjct: 431 SELNDPVIQRERLESQAKLRLRGDEEAMVVDEDFLRALEYGMPPCAGLGIGIDRVVMLIT 490

Query: 335 GANNINEVIWTPFSQSN 351
           G  +I +VI+ P  +  
Sbjct: 491 GQESIRDVIFFPHLKPE 507


>gi|319789983|ref|YP_004151616.1| lysyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114485|gb|ADU96975.1| lysyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 517

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 154/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R                R  +  ++RE+     F+E+++ 
Sbjct: 149 LRPLPEKWHGLKDTEKRYRQRYLDLIVNPEVREVFRTRTEVIKAIREFLDSRGFLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         + F T     + +   +YL+ +PE   K+LL  G E+++     +RN 
Sbjct: 209 ILQPIASGAA-AKPFITHY---NALDIDVYLRIAPELYLKRLLVGGFERVYELGKNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK---IFSFQNVNCNPFSE 164
                H PEFTM+EWY A+  Y  LM+    +     +           +Q    +    
Sbjct: 265 GISTRHNPEFTMVEWYMAYADYYDLMEMTEELFEFLLDRLYGPGVREIEYQGTKISFKRP 324

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
              I+  E  ++   +       +    +   +  +A++  I  A   +       +  +
Sbjct: 325 FRRISYLEELSKKTGL-----TPDELLHNEEKVLQKAKELEIENAEKLSHFKRVQELFEK 379

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +EP   +   T +  +P   S LA     +P   +RFEL+    E+ NA  EL +P EQ
Sbjct: 380 LVEPE--LIQPTFVVDFPKAISPLAKEKRGNPELVERFELFIYGREVANAYSELNNPEEQ 437

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF++++QEK +   E    D DF+  L   MP ++G  +G DRLVML T  ++I EV+
Sbjct: 438 ARRFKQQLQEKARGDEEAMEYDADFVTALEYGMPPTAGEGIGIDRLVMLFTDKDSIREVL 497

Query: 344 WTPFS 348
             P  
Sbjct: 498 LFPQL 502


>gi|239626630|ref|ZP_04669661.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516776|gb|EEQ56642.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 647

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 162/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I +++R+Y     F+E+++ 
Sbjct: 143 LQVLPEKFHGLTDTDMRYRQRYVDLIMNAEVKDTFIKRSRILAAIRKYLGGEGFMEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + L L+ S E   K+L+  G E+++     +RN 
Sbjct: 203 MLVANAGGAA-ARPFETHF---NALDEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V      ++  +  +     E
Sbjct: 259 GLDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRFVAQEVLGTTTITYNGIQMDLGRPFE 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y+ +D                   A++  +         DI +    E +
Sbjct: 319 RITMVDAVKKYSGVDFSQIHT------LEEARAAAREKHVEFEGRHKKGDILNLFFEEFV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P DP + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 373 EAH--LVQPTFVMDHPIEISPLTKKKPEDPEYVERFEFFMNGWEMANAYSELNDPIDQRE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDF+  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 431 RFKAQEELLAQGDEEANHTDEDFINALEVGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLF 490

Query: 346 PFSQS 350
           P  ++
Sbjct: 491 PTMKT 495


>gi|104773527|ref|YP_618507.1| lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116513522|ref|YP_812428.1| lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|103422608|emb|CAI97211.1| Lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116092837|gb|ABJ57990.1| Lysyl-tRNA synthetase (class II) [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 501

 Score =  330 bits (847), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 160/368 (43%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 141 LRPLPDKYHGLKDVESIYRQRYLDLITNHESYQRFVNRTKIIQAIRDYLNGQDFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 201 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V ++    ++Q  + +      
Sbjct: 257 GMDLKHNPEFTELETYAAYYDFHDVMDEAEGIIRAAAKVVSEDGKINYQGTDLDLGKPFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A +  + V        I +    +  
Sbjct: 317 RVHMVDLIKELTGVDFWQPMT------LEEARKVAAEHHVEVEPYWQVGHIINAFFEKFG 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++    E  NA  EL DP++QR 
Sbjct: 371 EKT--IVDPTFVYGHPVEVSPLAKKNADDPRFTDRFEIFIMGNEYGNAFSELNDPLDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDED+L  +   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 429 RFEAQMAERDAGNDEADIIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTNAASIRDVLLF 488

Query: 346 PFSQSNQE 353
           P  +  + 
Sbjct: 489 PTMRPEKN 496


>gi|90417431|ref|ZP_01225355.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90330765|gb|EAS46040.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 497

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 85/376 (22%), Positives = 151/376 (40%), Gaps = 36/376 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ +   +R Y     ++E+++ 
Sbjct: 133 LRPLPDKFHGLADQEMRYRQRYVDLIVNPDVRNTFRIRSRVVDFIRRYLNAADYLEVETP 192

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +   +Y++ +PE   K+L+  G E+++     +RN 
Sbjct: 193 MLQVIPGGAV-ARPFVTH---HNALDIDMYMRIAPELYLKRLVVGGFERVYEINRNFRNE 248

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------- 158
                H PEFTMLE+Y+A+  +  LM    +++R                          
Sbjct: 249 GLSTRHNPEFTMLEFYQAYSDFNDLMDLTEDMLRKMTTEVLGSTKVVNTTKDAEGEVVSE 308

Query: 159 --CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              +       ++V ++  +Y        +      D       A    I +        
Sbjct: 309 VHYDFAEPFIRLSVFDSILQY-----NPEISAEQLADEAGARKIATDLHIPLKDIWGLGK 363

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +   I  + +E    +   T +  YPA  S LA     DP  T RFE +    E+ N   
Sbjct: 364 VQIEIFEKTVE--HLLEQPTFITMYPAEVSPLARRNDQDPHVTDRFEFFVGGREIANGFS 421

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL D  +Q  RF++++ EK    +E    D D++  L   MP ++G  +G DRLVML+T 
Sbjct: 422 ELNDSEDQESRFKQQVAEKDAGDDEAMHFDADYIRALEYGMPPTAGEGIGIDRLVMLLTD 481

Query: 336 ANNINEVIWTPFSQSN 351
           + +I +V+  P  +  
Sbjct: 482 SPSIRDVLLFPHMRPE 497


>gi|126701178|ref|YP_001090075.1| lysyl-tRNA synthetase [Clostridium difficile 630]
 gi|115252615|emb|CAJ70458.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Clostridium
           difficile]
          Length = 509

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 171/364 (46%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              L R     +LR Y  +  F+E+++ 
Sbjct: 146 LQVLPEKYHGLKDQELRYRQRYVDLIVNPEVKNAFLIRTKALKALRAYLDDRGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +  P+YL+ + E   K+L+  G +K++     +RN 
Sbjct: 206 ILNTIAGGA-NARPFIT---NHNTLHIPMYLRIANELYLKRLIVGGFDKVYEMGRMFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPE 166
                H PE+T +E Y+A+  Y  +M+   N+I   AEVA   +  ++Q    N     +
Sbjct: 262 GMDLKHNPEYTAIELYQAYADYTDMMEITENVIAHMAEVATGSMIVNYQGTEINFTPPWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +    Y+ +D  T   + +  +       A++ GI +       ++ +    E  
Sbjct: 322 RMSMEDCVKEYSGVDFSTINTDEEALE------VAREKGIEIKPGMRRGEVINAFFEEFG 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L+     DPR T RFE +A   EL NA  EL DPI+Q+ 
Sbjct: 376 EDK--LIQPTFITHHPVEVSPLSKRNVEDPRRTDRFEAFANKWELANAFSELNDPIDQKG 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++++++   +E + +DEDFL  L   +P + G+ +G DR++ML+T + +I +V+  
Sbjct: 434 RFIDQLRKRELGDDEAFEMDEDFLKALEVGLPPTGGLGIGIDRVIMLLTNSPSIRDVLLF 493

Query: 346 PFSQ 349
           P  +
Sbjct: 494 PTMK 497


>gi|146299679|ref|YP_001194270.1| lysyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146154097|gb|ABQ04951.1| lysyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 567

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 103/378 (27%), Positives = 169/378 (44%), Gaps = 37/378 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR R              +KR  + +++R YF + 
Sbjct: 136 LRPLPLPKVDEDGNVHDAFNDAELRYRMRYVDLTVNPQVKETFIKRTKLFTAMRGYFNDA 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+D+  LQ  PG  +  R F T     + +  PLY++ + E   K+L+  G E ++ 
Sbjct: 196 GYLEVDTPVLQSIPGGAS-ARPFITH---HNSLDIPLYMRIANELYLKRLIVGGFEGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M+    ++   A   N     +F    
Sbjct: 252 FSRNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMEFAEGLLEHCAIAVNGTSEVTFGEHK 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N  +    +T+ ++   +   D+              L+  A+  GI V        + 
Sbjct: 312 INFKAPYARVTMTDSIKHFTGFDISG-------KTEQELFEAARGMGIEVDETMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I   K E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGAKCEGNY--IQPTFITDYPKEMSPLCKEHRDNPDLTERFELMVCGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPI+QR RFE +M+  +K  +E    IDEDFL  L   MP +SG+ +G DRL+M +T  
Sbjct: 423 NDPIDQRERFEDQMRLSEKGDDEANGIIDEDFLRALEYGMPPTSGMGIGMDRLIMYLTNN 482

Query: 337 NNINEVIWTPFSQSNQEE 354
            +I EV+  P  +  +++
Sbjct: 483 ASIQEVLLFPQMRPEKKQ 500


>gi|186476208|ref|YP_001857678.1| lysyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238691313|sp|B2JIY1|SYK_BURP8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|184192667|gb|ACC70632.1| lysyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 512

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 156/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R    SS+R++  E  F+E+++ 
Sbjct: 153 LRPLPDKFHGLADQEMRYRQRYVDLIVTDEARKTFVARTKAVSSIRKFMAEADFMEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 213 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     +IR  A +       ++Q    +      
Sbjct: 269 GVSPRHNPEFTMMEFYAAYTDYKWLMDFTEQLIRQAAVDALGNAAITYQGRELDLSKPFH 328

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+        +     + +   
Sbjct: 329 RLTITQAIQKYA-----PQYSDAQLADGAFLRTELKKFGVDATQPAFLNAGIGALQLALF 383

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA    +    T+RFEL+    E+ N   EL DP +Q
Sbjct: 384 EETAESQLWEPTFIIDYPIEVSPLARASDSVDGITERFELFITGREIANGFSELNDPEDQ 443

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++ +K     E    D D++  L   MP + G  +G DRLVML+T + +I +VI
Sbjct: 444 AARFKKQVDQKDAGDEEAMYYDADYIRALEYGMPPAGGCGIGIDRLVMLLTDSPSIRDVI 503

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 504 LFPHLRRE 511


>gi|260911445|ref|ZP_05918035.1| lysine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634444|gb|EEX52544.1| lysine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 576

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 94/355 (26%), Positives = 154/355 (43%), Gaps = 26/355 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +  +R+R              LKR  + S++R++F E  + E+++ +LQ   G  T  
Sbjct: 160 DPELRFRQRYVDLVVNEGIKETFLKRAKVISTMRQFFDEAGYTEVETPTLQSIAGGAT-A 218

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F T     + + + ++L+ + E   K+L+  G E ++     +RN      H PEFT+
Sbjct: 219 RPFITHF---NALNQEMFLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNPEFTL 275

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS-EPEYITVAEAFARYA 178
           +E Y  ++ Y  +M     ++       N K  S  +     F      + + +A     
Sbjct: 276 MELYVQYKDYNWMMSFTERLLETICVAVNGKPESVVDGQVISFKAPYRRLPILDAIKEKT 335

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D        D      +    ++  + +        +   I  E  E        T +
Sbjct: 336 GYD-------LDGKTEDEIRQVCKELKLDIDETMGKGKLIDEIFGEFCEGQ--FIQPTFI 386

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF ++M+   K 
Sbjct: 387 TDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFVEQMKLADKG 446

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +E   ID+DFL  L   MP +SGI +G DRLVML+TG   I EV+  P  +  +
Sbjct: 447 DDEAMIIDKDFLRSLQYGMPPTSGIGIGIDRLVMLMTGQTAIQEVLLFPQMRPEK 501


>gi|329913867|ref|ZP_08276000.1| Lysyl-tRNA synthetase (class II) [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327545273|gb|EGF30527.1| Lysyl-tRNA synthetase (class II) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 510

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 155/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    SS+R +  E++F+E+++ 
Sbjct: 155 LRPLPDKFHGLADQEMKYRQRYVDLIMSEETRRTFKARTATMSSIRRFMNEHEFMEVETP 214

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 215 MLHTIPGGAA-AKPFITH---HNALDMQMFLRIAPELYLKRLVVGGFERVFEVNRNFRNE 270

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +       ++Q    +      
Sbjct: 271 GVSPRHNPEFTMMEFYAAYVDYHWLMDFTEAVIRQAAIDAHGTATLTYQGRELDLSQPFR 330

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+  A   YA              D   +  + ++ G++         +   +  E  
Sbjct: 331 RFTILGAINHYA-----PQYSAEQLADADFIKTELKKFGVKPFATAGLGALQLALFEETA 385

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA      P  T+RFEL+ C  EL N   EL D  +Q  
Sbjct: 386 EAQ--LWEPTYIVDYPAEVSPLARASDTVPGITERFELFICGRELANGFSELNDAEDQAA 443

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI  
Sbjct: 444 RFQAQVAAKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMLITDSPNIRDVILF 503

Query: 346 PFSQSN 351
           P  +  
Sbjct: 504 PHLRRE 509


>gi|258648093|ref|ZP_05735562.1| lysine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260851957|gb|EEX71826.1| lysine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 578

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 94/375 (25%), Positives = 155/375 (41%), Gaps = 35/375 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R               KR++I  +LR+   E  
Sbjct: 142 IRPLPVVKEKDGEVYDGFSDPELRYRQRYVDLIVNPDVKETFRKRSIIIKTLRDALDEAG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ   G  +  R F T     + +   LYL+ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPILQPIAGGAS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M    +++       N    +  +    
Sbjct: 258 GKNFRNEGMDKNHNPEFTCMELYVQYKDYNWMMSFTESLLERICIAVNGSTETVIDGKTI 317

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            F      + + EA       DL          +   +    ++  + +        +  
Sbjct: 318 SFKAPYRRLPILEAIREKTGYDLSD-------KNEDEIRAICKELKMEIDETMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L   +  +P  T+RFEL     EL NA  EL 
Sbjct: 371 EIFGEFCEGT--FIQPTFITDYPIEMSPLTKKHRDNPALTERFELMVNGKELANAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+ +++  +K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG + 
Sbjct: 429 DPIDQEERFQDQLRLSEKGDDEAMFIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQSY 488

Query: 339 INEVIWTPFSQSNQE 353
           I EV+  P  +  + 
Sbjct: 489 IQEVLLFPTMRPEKN 503


>gi|328712346|ref|XP_003244783.1| PREDICTED: lysyl-tRNA synthetase-like isoform 2 [Acyrthosiphon
           pisum]
          Length = 579

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 87/375 (23%), Positives = 161/375 (42%), Gaps = 30/375 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R  + S +R +     F+EI++ 
Sbjct: 194 LHMLPHMHYGLKDKETRYRQRYLDLIINEHVRNKFIVRAKVISYVRRFLDNLGFLEIETP 253

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 254 MMNMIAGGAT-AKPFITH---HNDLNMDLFMRVAPELYHKMLVVGGIDRVYEIGRQFRNE 309

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------- 157
                H PEFT  E+Y A+  Y  LM+   +++    +          +           
Sbjct: 310 AIDLTHNPEFTTCEFYMAYADYNDLMQITEDLLSGLVKSIYGTYKIKYHPDGVDANTEAV 369

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +     + + +  A     ++ L    +        LL     +  I      T + +
Sbjct: 370 EIDFTPPFKRMYMFPALEEILSVKLPNPTELATVEANKLLDDLCLKHEIECPPPRTSARL 429

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             +++ E +E        T +  +P   S LA  + + P  T+RFEL+    E+CNA  E
Sbjct: 430 LDKLVGEFLEEKC--INPTFICDHPQVMSPLAKWHRSIPGLTERFELFVMKKEVCNAYTE 487

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DP+ QR RFE++ ++K    +E   IDE+F   L   +P ++G  +G DRL M +T +
Sbjct: 488 LNDPMIQRERFEQQAKDKAAGDDEAQLIDENFCTSLEYGLPPTAGWGLGIDRLTMFLTDS 547

Query: 337 NNINEVIWTPFSQSN 351
           NNI EV++ P  + +
Sbjct: 548 NNIKEVLFFPAMKPD 562


>gi|295111294|emb|CBL28044.1| Lysyl-tRNA synthetase (class II) [Synergistetes bacterium SGP1]
          Length = 511

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 169/366 (46%), Gaps = 24/366 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YRRR               KR+ I SS RE    +  +E+++ 
Sbjct: 156 IRPLPEKWHGLTDTETRYRRRYMDLIANPEVREVFRKRSKIISSFRETLEAHGSLEVETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   +YL+ + E   K+L+     +++     +RN 
Sbjct: 216 ILSVLAGGA-NARPFKT---FHNALGLDMYLRIAVELYLKRLVVGMMGRVYEIGRNFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
               +H PEFTM+E Y  + +YE +M     +IR AA+        +  V  +       
Sbjct: 272 GIDTMHNPEFTMMEVYWPYANYEDMMNLAEELIRNAAKAIGTLEIEWNGVKADLSRPFRR 331

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           IT+ +A   YA +DL    D+    +      + +  G  +   ++   + + +     E
Sbjct: 332 ITMLDAVKEYAGVDLSAVTDD----EAARKIAREKGLGGDLKGTESRFAVLNLLYEAFCE 387

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
             +     T +  +P   S L+   P +P +T RFEL+    E+ NA  EL DP++QR R
Sbjct: 388 EKMV--QPTFVMGHPTEISPLSKRDPENPDYTHRFELFMFGKEVANAFSELNDPLDQRAR 445

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE +M++K+   +E +  DEDF+  +   +P + G+ +G DRLVM +TGA +I +VI  P
Sbjct: 446 FEDQMRKKEAGDDEAHAFDEDFINAIEVGLPPTGGMGIGMDRLVMFLTGARSIRDVILFP 505

Query: 347 FSQSNQ 352
             + N+
Sbjct: 506 AMKPNE 511


>gi|326203393|ref|ZP_08193258.1| lysyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325986651|gb|EGD47482.1| lysyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 499

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 93/361 (25%), Positives = 163/361 (45%), Gaps = 27/361 (7%)

Query: 6   SQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +    +D    YR+R              + R+ I  S+R++     F+E+D+  L   
Sbjct: 150 EKWHGLKDTDLRYRQRYVDLIVNPEVKNTFILRSKIIKSIRKFLDNRGFLEVDTPLLNTI 209

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
           PG  T  R F T     + +   +YL+ +PE   K+L+  G EK++     +RN      
Sbjct: 210 PGGAT-ARPFVTH---HNTLDIDMYLRIAPELYLKRLIVGGMEKVYEMGRMFRNEGMSVK 265

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYITVA 171
           H PEFTM+E Y A+  Y+ +M+   N+I   A          +Q  + +       +T+ 
Sbjct: 266 HNPEFTMMEVYEAYNDYKGMMELTENLISTVAMETLGTTKIQYQGQDIDLTPPWNRMTMI 325

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           EA  +++ ID  T   +            A+   + V       +I + +  E +E N  
Sbjct: 326 EAVKKFSGIDFDTIKTD------EEAKAAAESKKVHVKEGMVRGEILNLMFEEFVESN-- 377

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   T +  YP   S L    P  P  T+RFE +    E+ NA  EL DPI+Q+ RF  +
Sbjct: 378 LVQPTFIYDYPVEISPLTKRKPNCPELTERFEFFITGREMGNAYSELNDPIDQKDRFISQ 437

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++++     E   +D+D++  L   MP + G+ +G DRL++L+T + +I +++  P  + 
Sbjct: 438 VKKRDSGDEEANMMDDDYVTALEYGMPPTGGLGIGVDRLIILLTDSASIRDIMLFPTMKP 497

Query: 351 N 351
            
Sbjct: 498 R 498


>gi|325684702|gb|EGD26856.1| lysine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 507

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 160/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 141 LRPLPDKYHGLKDVESIYRQRYLDLITNHESYQRFVNRTKIIQAIRDYLNGQDFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 201 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V ++    ++Q  + +      
Sbjct: 257 GMDLKHNPEFTELETYAAYYDFHDVMDEAEGIIRAAAKVVSEDGKINYQGTDLDLGKPFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A +  + V        I +    E  
Sbjct: 317 RVHMVDLIKELTGVDFWQPMT------LEEARKVAAEHHVEVEPYWQVGHIINAFFEEFG 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++    E  NA  EL DP++QR 
Sbjct: 371 EKT--IVDPTFVYGHPVEVSPLAKKNADDPRFTDRFEIFIMGNEYGNAFSELNDPLDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDED+L  +   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 429 RFEAQMAERDAGNDEADIIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTNAASIRDVLLF 488

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 489 PTMRPEK 495


>gi|149773189|dbj|BAF64769.1| Lysyl-tRNA synthase class II [Shewanella livingstonensis]
          Length = 497

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + +++R + V+ +F+E+++ 
Sbjct: 136 LRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRNAFIMRSKVVAAIRNFMVKKEFMEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 196 MMHVIPGGAS-ARPFVTH---HNALDMAMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A+         +            
Sbjct: 252 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLGSIAQELLGSTSMPYGEETVEFGGAYA 311

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA  +Y   +     +      D   +   A   GI++    T   +   I  E 
Sbjct: 312 RLSMLEAIQKYNPDNATIQAMTYEQVKDVEFMRDLASSLGIKLEKFWTCGQLLEEIFGET 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 372 AETK--LMQPTFITGYPADISPLARRNDNNDFITDRFEFFIGGREVANGFSELNDAEDQD 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 430 NRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 489

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 490 FPAMRPQ 496


>gi|323451918|gb|EGB07794.1| hypothetical protein AURANDRAFT_59065 [Aureococcus anophagefferens]
          Length = 485

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YRRR                R  I S +R +  +  F+EI++ 
Sbjct: 130 LAPLPDKHKGLVDVQTRYRRRELDLIANPDVRRTFELRAKITSGIRRFLDDRGFLEIETP 189

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L   PG     + F T     + +   L L+ + E   K+L+  G ++++     +RN 
Sbjct: 190 TLHSQPGGA-EAKPFET---KHNALDLDLTLRIATELHLKRLVVGGFDRVYELGRIFRNE 245

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     ++   A  +       + +   +  +   
Sbjct: 246 GVSTRHNPEFTSVELYQAYADYDDMMVLTETLVESLAENLVGTTQLPYADETIDVSAPWR 305

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T++E        D G   +  D  +       A          +T   + +    E  
Sbjct: 306 RVTMSEVVR-----DAGVDFEGLDLDEAKAAAKAAGVPAALADKQETLGYLLNCCFEELC 360

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA  + + P   +RFEL+    EL NA  EL DP++QR 
Sbjct: 361 EAS--LRQPTFVTDYPVEISPLAKPHRSKPGLVERFELFCVGRELANAYSELTDPVDQRA 418

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  +K    +E   +DEDFLA +   +P + G+ +G DRLVML+T A +I +VI  
Sbjct: 419 RFEAQAAKKAAGDDEACGVDEDFLAAVEHGLPPTGGLGIGIDRLVMLLTNAPSIRDVIAF 478

Query: 346 PFSQSN 351
           P  +  
Sbjct: 479 PLLKPE 484


>gi|170725302|ref|YP_001759328.1| lysyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688658|sp|B1KFR7|SYK_SHEWM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169810649|gb|ACA85233.1| lysyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 501

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 85/367 (23%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + V+ +F+E+++ 
Sbjct: 140 LRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRNAFIMRSKVVSAIRNFMVKKEFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 200 MMHSIPGGAS-ARPFETH---HNALDIAMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  +  LM     ++   A          +     +      
Sbjct: 256 GLSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLSSIATELCGSPQLPYGEHTVDFGGPYA 315

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y   +    ++   +  D   +   A+  G+ +    T   +   I  E 
Sbjct: 316 RLSMLDAIKKYNPDNATIQSMTYEEVKDVEFMRDLAKSLGMTIEKFWTCGQLLEEIFGET 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 376 AETQ--LMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAEDQD 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 434 NRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 493

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 494 FPAMRPQ 500


>gi|317131158|ref|YP_004090472.1| lysyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469137|gb|ADU25741.1| lysyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 505

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 97/362 (26%), Positives = 160/362 (44%), Gaps = 26/362 (7%)

Query: 6   SQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +    +D    YR+R              ++R+ I + +R +  +  FIE+++  L   
Sbjct: 155 EKFHGLKDTELRYRQRYLDLIMNPEVKETFVRRSRIIAFIRSFLEQKGFIEVETPILNVI 214

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
           PG     R F T     + +   LYL+ +PE   K+L+  G EK+F     +RN      
Sbjct: 215 PGGAA-ARPFITH---HNTLDMDLYLRIAPELYLKRLIVGGMEKVFEIGRLFRNEGIDVK 270

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPEYITVA 171
           H PEFT +E Y+A+  Y  +M+    ++  AA+     +  +      +       +T+ 
Sbjct: 271 HNPEFTSIEIYQAYTDYNGMMRLTEELVAGAAQTVLGTMKITCGGEEIDLTPPWRRLTMV 330

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           EA   Y  ID           D       A+  G+ +    +W D   +   EK+E    
Sbjct: 331 EAVKTYTGIDFDVLRG-----DDAAAVAAAKGLGVEIEKGKSWGDALYQTFDEKVEEQ-- 383

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   T +  YP   S L       P  T+RFE +    E+ NA  EL DPI+QR RF ++
Sbjct: 384 LVQPTFILDYPIEVSPLTKRKADRPELTERFEFFILRREMGNAYSELNDPIDQRERFLRQ 443

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +     E   +DEDF+  L   MP + G+ +G DRLVML+T + +I +V+  P  + 
Sbjct: 444 VELRNAGDLEAGMMDEDFVTALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPTMKP 503

Query: 351 NQ 352
            +
Sbjct: 504 KE 505


>gi|124265793|ref|YP_001019797.1| lysyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|166229811|sp|A2SDC3|SYK_METPP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|124258568|gb|ABM93562.1| lysyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 508

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 163/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+   SS+R++ VE+ F+E+++ 
Sbjct: 154 LRPLPDKFHGMADQELKYRQREVDLIMDEASRERFRARSKAVSSIRQFMVEHGFLEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 214 MLHPIPGGA-NAKPFVTH---HNALDQQMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ ++  LM     I+R AA         ++     +  S   
Sbjct: 270 GVSVRHNPEFTMMEFYAAYWTHHDLMDFTEQILRHAARKAVGTAQLAYGGQAVDLESPFA 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++   +A +         +  D  +L  + +  G +     + +++   +    +
Sbjct: 330 RLSVRDSLIAHAGL------SAAEAADTTVLRAKLEAHGEKAPAHWSLAELQFGLFEAAV 383

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    ADP  T+RFEL+    E  N   EL DP +Q  
Sbjct: 384 EEK--LWQPTFIVDYPVEVSPLARASDADPTITERFELFITGREFGNGFSELNDPEDQAA 441

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +   K     E    D D++  L   +P + G  +G DRL+ML+T + NI +VI  
Sbjct: 442 RFAAQASNKDAGDEEAMYFDTDYIRALEHGLPPTGGCGIGIDRLMMLLTDSPNIRDVILF 501

Query: 346 PFSQSN 351
           P  +  
Sbjct: 502 PALRRE 507


>gi|206896287|ref|YP_002247421.1| lysyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206738904|gb|ACI17982.1| lysyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 491

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 115/369 (31%), Positives = 177/369 (47%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R               KR  I  ++RE      F+E+++ 
Sbjct: 125 LRPLPEKWHGVKDPEVRYRQRYLDLIIDDDSRERFRKRADIIKAIRELLWSKGFVEVETP 184

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  P   +  + F T     + +   LYL+ +PE   K+L+  G  K+F     +RN 
Sbjct: 185 ILQPIPSGAS-AKPFVTH---HNALDIDLYLRIAPELYLKRLVVGGVHKVFELGKNFRNE 240

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y+    YE +M+   +I   AA+V+   +  SF+ +  N     +
Sbjct: 241 GIDQNHNPEFTMLELYQTPGDYEDMMRITEDIFSAAAQVSGAAECVSFKGMTVNLSRPFK 300

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T  EAF   AN+D        D           +  GI +    TW +I  ++  E +
Sbjct: 301 RLTFKEAFKHIANLDWS------DLDTLEKATAVMKANGIEMTKTPTWENIIQKLFDELV 354

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P+L     T +  YP   S LA   P DPRF  RFEL+   +E+ NA  EL DP +Q+ 
Sbjct: 355 QPHLVD--PTFVLDYPVEISPLAKRKPDDPRFVYRFELFVAGMEMANAFSELQDPFDQKA 412

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++M+ K++   E   +DEDF+  L   +P + G+ +G DRLVML+T A NI +VIW 
Sbjct: 413 RFEEQMKLKEQGEEEVILMDEDFVVALEYGLPPTGGLGVGIDRLVMLLTEAENIKDVIWF 472

Query: 346 PFSQSNQEE 354
           P  +    E
Sbjct: 473 PTLRPKSTE 481


>gi|307200232|gb|EFN80526.1| Lysyl-tRNA synthetase [Harpegnathos saltator]
          Length = 584

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 88/375 (23%), Positives = 160/375 (42%), Gaps = 28/375 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R                R  I + +R Y  +  F+E+++ 
Sbjct: 195 LHMLPHLHFGLKDKETRYRQRYLDLIINNRVRQIFHIRAKIIAYIRSYLDKLGFLEVETP 254

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 255 MMNMIAGGAT-AKPFVT---YHNELNMELFMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 310

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM    +++    +  +       +        +  
Sbjct: 311 GIDMTHNPEFTTCEFYMAYADYNDLMSLTEDMVSSMVKAIHGTYKIVYHPDGPEGEGMEI 370

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I++ +        +L             +L     +  I  A   T + +  
Sbjct: 371 DFTPPFKRISMMKTLEEALQTELPKVDQLNTPETNKILSDLCVKYDIECASPRTSARLLD 430

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + ++   T+RFEL+    E+CNA  EL 
Sbjct: 431 KLVGEFIEEKC--INPTYIIDHPQVMSPLAKWHRSEEGLTERFELFVMKKEICNAYTELN 488

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI QR RFE++ ++K     E   +DE F   L   +P ++G  MG DRL M +T +NN
Sbjct: 489 DPIVQRERFEQQAKDKAAGDEEAQMVDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 548

Query: 339 INEVIWTPFSQSNQE 353
           I EV+  P  + ++ 
Sbjct: 549 IKEVLLFPQMKPDEN 563


>gi|116628954|ref|YP_814126.1| lysyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|311111241|ref|ZP_07712638.1| lysine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|116094536|gb|ABJ59688.1| Lysyl-tRNA synthetase (class II) [Lactobacillus gasseri ATCC 33323]
 gi|311066395|gb|EFQ46735.1| lysine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 504

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++    +D    YR+R              + R  I  ++R Y  +  F+E+++ 
Sbjct: 142 LRPLPNKWDGLKDVEQIYRQRYLDLITNHESYMRFVHRTQIIQAIRNYLNKQDFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+  G E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGGMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GVDTRHNPEFTELETYAAYWDFHDVMDEAEEIIRAAAKVVSPDGKINYQGTDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    + +            A++ GI          + +    E  
Sbjct: 318 RVHMVDLIKEKTGVDFWKEMTD------EEAKKIAEEHGIHTEPFWKVGHVINAFFDEFC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++   +E  NA  EL DP++QRH
Sbjct: 372 EKT--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIFILGMEYGNAFSELNDPVDQRH 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++M+E++   +E   IDED++  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEEQMEEREAGNDEADMIDEDYIRAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPEKVE 498


>gi|323340117|ref|ZP_08080382.1| lysine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092494|gb|EFZ35101.1| lysine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 497

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 168/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I +++R Y  +N F+E+++ 
Sbjct: 142 LRPLPDKYHGLQDIEQIYRQRYLDLITNRESYDRFVNRSRIVTAIRRYLDKNGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 202 VLHTQAGGAS-ARPFITH---HNALDIELYLRIALELHLKRLIVGGMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  ++ +M +   I + AA+V +     ++Q    N     +
Sbjct: 258 GIDTHHNPEFTMLETYAAYFDFKDVMDETEGIFKAAAKVVSDNSIVTYQGTEVNFDKPFK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +    Y  +D    +              A + G+          I +    E  
Sbjct: 318 RAHMVDLIKEYTGVDFWKEMTV------EEARKIADEHGVHYESYWKVGHIINEFFEEFC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFELY    E  NA  EL DPI+QR 
Sbjct: 372 EDK--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFELYILGGEYANAFTELNDPIDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+K   +E   IDED++  +   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 430 RFEAQVEERKAGNDEAEGIDEDYIEAMEYGMPPTGGLGIGIDRLVMLLTNAESIRDVLLF 489

Query: 346 PFSQSNQE 353
           P  ++ ++
Sbjct: 490 PTMKTIEK 497


>gi|331000231|ref|ZP_08323915.1| lysine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329572397|gb|EGG54050.1| lysine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 511

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 156/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              + R+   +  R++ +E+ F+E+++ 
Sbjct: 156 IRPLPDKFHGLSDPETRYRQRYVDLIMNESTRRTFMIRSKAIAETRKFMMEHHFMEVETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + +   +YL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 216 MLHPIPGGA-NAKPFITH---HNALDMDMYLRIAPELYLKRLVVGGFERVFELNRSFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A++ Y  LM     ++R  A +     +  +Q    +     +
Sbjct: 272 GVDVRHNPEFTMMEFYAAYKEYHWLMDYTEKLLRTVAEKTIGTAVIQYQGHTIDLTKPFD 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T  EA  +YA              D+  +  + ++ G     D     +   I     
Sbjct: 332 RLTAKEAVLKYA-----PQYTPEQLEDKDFMQEELKRLGEPAKADAGVGALQMAIFEAVA 386

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA      P  T+RFEL+    E  N   EL DP +Q  
Sbjct: 387 ESK--LIQPTYIIDYPVEISPLARASDKVPGITERFELFMAGRETANGFSELNDPQDQAA 444

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + + K    +E    D D++  L   +P + G  +G DR VML+T + +I +V+  
Sbjct: 445 RFMAQAKLKASGDDEAMYYDADYVRALEYGLPPTGGCGVGLDRFVMLLTDSPSIRDVLLF 504

Query: 346 PFSQSN 351
           P  +  
Sbjct: 505 PHMRPE 510


>gi|221632875|ref|YP_002522097.1| lysyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156597|gb|ACM05724.1| lysyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 529

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 109/366 (29%), Positives = 168/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++  P +     D    YR+R              + R  +  ++R+Y  E  F+E+++ 
Sbjct: 140 LNPPPDKWHGLTDVETRYRQRYVDLMANPDTRQIFVTRARVIRAIRQYLDERGFLEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +LQ   G     R F+T       + +  YL+ S E   K+LL  G E+++     +RN 
Sbjct: 200 TLQPIYGGAA-ARPFTTYYH---ALDQTFYLRISDELYLKRLLVGGYERVYEICKDFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  +M+ C  +I  AA        F + +   +      
Sbjct: 256 GIDARHNPEFTMLEFYAAYADYHDIMQMCEELIVFAAREALGTLTFQWGDTVIDLTPPWA 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA  R+  ID     D P       LY +A+  G  V     W  I   +L   +
Sbjct: 316 RMSLREALLRFTGIDFLEVTDQPT------LYARARALGADVEPTTVWPRILDELLKTFV 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
            P   +   T +  YP   S LA   P DPR  +RF+L+   +EL NA  EL DP++Q +
Sbjct: 370 RPR--LVQPTFIYDYPVALSPLAKRKPEDPRLVERFQLFVGGLELANAYTELNDPLDQLY 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ +++ +   E  PIDEDF+  L   MP + G  +G DRLVML T    I EVI  
Sbjct: 428 RFLEQARDRAQGDEEAMPIDEDFINALMYGMPPTGGFGLGIDRLVMLFTNRPTIREVILF 487

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 488 PQLRTK 493


>gi|328712348|ref|XP_001951614.2| PREDICTED: lysyl-tRNA synthetase-like isoform 1 [Acyrthosiphon
           pisum]
          Length = 595

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 87/375 (23%), Positives = 161/375 (42%), Gaps = 30/375 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R  + S +R +     F+EI++ 
Sbjct: 210 LHMLPHMHYGLKDKETRYRQRYLDLIINEHVRNKFIVRAKVISYVRRFLDNLGFLEIETP 269

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 270 MMNMIAGGAT-AKPFITH---HNDLNMDLFMRVAPELYHKMLVVGGIDRVYEIGRQFRNE 325

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------- 157
                H PEFT  E+Y A+  Y  LM+   +++    +          +           
Sbjct: 326 AIDLTHNPEFTTCEFYMAYADYNDLMQITEDLLSGLVKSIYGTYKIKYHPDGVDANTEAV 385

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +     + + +  A     ++ L    +        LL     +  I      T + +
Sbjct: 386 EIDFTPPFKRMYMFPALEEILSVKLPNPTELATVEANKLLDDLCLKHEIECPPPRTSARL 445

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             +++ E +E        T +  +P   S LA  + + P  T+RFEL+    E+CNA  E
Sbjct: 446 LDKLVGEFLEEKC--INPTFICDHPQVMSPLAKWHRSIPGLTERFELFVMKKEVCNAYTE 503

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DP+ QR RFE++ ++K    +E   IDE+F   L   +P ++G  +G DRL M +T +
Sbjct: 504 LNDPMIQRERFEQQAKDKAAGDDEAQLIDENFCTSLEYGLPPTAGWGLGIDRLTMFLTDS 563

Query: 337 NNINEVIWTPFSQSN 351
           NNI EV++ P  + +
Sbjct: 564 NNIKEVLFFPAMKPD 578


>gi|237752509|ref|ZP_04582989.1| lysyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375998|gb|EEO26089.1| lysyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 500

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 161/369 (43%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              + R+ I S +R++F   +F+E+++ 
Sbjct: 140 ISPLPEKFHGLVDIELRYRQRYLDLIMNSKVRDSFILRSRIVSCVRKFFESKEFLEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG   + + F T     + +    YL+ +PE   K+L+  G E +F     +RN 
Sbjct: 200 MMHPIPGGA-NAKPFVT---YHNALNVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E+Y A++ Y+ L+     +     E+         N     FS    
Sbjct: 256 GMDHSHNPEFTMIEFYWAYKDYKDLIALTKELFYFLLEMLKLPKQLEFNGKSIDFSTFRE 315

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I+  +A      I  G         + + LY    Q  +++        + S      +E
Sbjct: 316 ISYEDALVEIGGIPRGVA------TNENALYEYLLQNNVKLESKMELGKLQSEAFDAFVE 369

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P    RFEL+    E+ N   EL DP++Q  R
Sbjct: 370 EK--LINPTFITDFPIAISPLARRNDTNPYIADRFELFIGGSEIANGFSELNDPLDQLER 427

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+ ++  K+    E   +DED++  L   MP ++G  +G DRLVML+TG  +I +VI  P
Sbjct: 428 FKAQVAAKEAGDEEAQYMDEDYITALSYGMPPTAGEGIGIDRLVMLLTGNISIKDVILFP 487

Query: 347 FSQSNQEEI 355
             +  ++EI
Sbjct: 488 ALKPQKKEI 496


>gi|319942464|ref|ZP_08016776.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804013|gb|EFW00926.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 505

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 162/368 (44%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR              +KR+   +S+R + + N F+E+++ 
Sbjct: 148 LRPMPDKHKGLQDQEFCYRRRYVDLMVNAESRERFIKRSKAIASIRNFMLANDFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 208 MLHPIPGGA-NARPFITH---HNALNTEMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y  + +Y+  M+    ++R  A       I ++Q +  N     +
Sbjct: 264 GIDARHNPEFTMMEFYATYWTYKDQMEFTEALLRHVAREVTGSAIVTYQGMTINFEEPFD 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T  +A  +Y+              D   L  + ++ G     D T   +   +  E +
Sbjct: 324 KLTPKQAILKYS-----PEYTESQLTDEDFLKKEIKRLGADEQIDPTLGSLQMALFDETV 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T+RFEL+    E  N   EL DP +Q  
Sbjct: 379 EKK--LIKPTFIIDYPTEISPLARASDVNPDITERFELFIAGRETANGFSELNDPDDQAA 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++ K    +E    D D++  L   +P ++G  +G DR +ML+T A  I +V+  
Sbjct: 437 RFRAQVERKGHGDDEAMYYDADYVTALEYGLPPTAGCGIGIDRFMMLLTDAPTIRDVLLF 496

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 497 PALRPESK 504


>gi|313123090|ref|YP_004033349.1| lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312279653|gb|ADQ60372.1| Lysyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 507

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 160/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 141 LRPLPDKYHGLKDVESIYRQRYLDLITNHESYQRFVNRTKIIQAIRDYLNGQDFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 201 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V ++    ++Q  + +      
Sbjct: 257 GMDLKHNPEFTELETYAAYYDFHDVMDEAEGIIRAAAKVVSEDGKINYQGTDLDLGKPFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A +  + V        I +    E  
Sbjct: 317 RVHMVDLIKELTGVDFWQPMT------LEEARKVAAEHHVEVEPYWQVGHIINAFFEEFG 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++    E  NA  EL DP++QR 
Sbjct: 371 EKT--IVDPTFVYGHPVEVSPLAKKNADDPRFTDRFEIFIMGNEYGNAFSELNDPLDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDED+L  +   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 429 RFEAQMAERDAGNDEADIIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTNAASIRDVLLF 488

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 489 PTMRPEK 495


>gi|307546433|ref|YP_003898912.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307218457|emb|CBV43727.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 517

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 94/378 (24%), Positives = 157/378 (41%), Gaps = 36/378 (9%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R  + S++R +F ++ F+E+++ 
Sbjct: 151 LRPLPDKFHGLTDMEARYRQRYVDLIMNPDSRRVFETRAGVISAMRRFFEDHGFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + +   +YL+ +PE   K+L+  G EK+F     +RN 
Sbjct: 211 MLQPIPGGAT-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFEKVFEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-----------NQKIFSFQN 156
                H PEFTM+E+Y+A+  Y+ LM     ++R                 + +    + 
Sbjct: 267 GLSTRHNPEFTMVEYYQAYADYQDLMDFTEAMLRTVTREVLGDTTVVSTVRDSEGEVLET 326

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              +     E ++V +A   Y        +      D       A++  I V        
Sbjct: 327 FEYDFGKPFERLSVFDAILAY-----NPDITAEALADEAAARQIAERLDIDVKDGWGLGK 381

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +   I  + +E    +   T +  YP   S LA     DP  T+RFE +    EL N   
Sbjct: 382 VQIEIFEKTVEHR--LQQPTFIIDYPTEVSPLARRKDTDPFVTERFEFFVGGRELANGFS 439

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL D  +Q  RF  +  EK     E    D D++  L   +P ++G  +G DRLVML+T 
Sbjct: 440 ELNDAEDQAERFAAQAAEKDAGDQEAMYYDADYVRALEYGLPPTAGEGIGIDRLVMLLTD 499

Query: 336 ANNINEVIWTPFSQSNQE 353
           + +I +V+  P  + + +
Sbjct: 500 SASIRDVLLFPAMRPSAD 517


>gi|121699116|ref|XP_001267916.1| lysyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119396058|gb|EAW06490.1| lysyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 609

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 90/372 (24%), Positives = 158/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H IPS+ +   +++  +R+R              + R+ I S +R YF    FIE+++ 
Sbjct: 214 LHAIPSEHYGFQDKEQRFRQRYLDLIMNERSRNVFVTRSKIVSYVRNYFDSRDFIEVETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 274 MMNAIAGGAT-AKPFVTH---HNDLDMNLFMRVAPELYLKMLIVGGLERVYELGRQFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     +I    +       +  +       N N 
Sbjct: 330 GIDLTHNPEFTTCEFYWAYADVYDVMNLTEELISGLVKHVTGGYETTFHTQSGEVYNVNW 389

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    + +  A                       L    ++ G+  +   T + +  ++
Sbjct: 390 KAPWRRVEMIPALEEATGEKFPPGDQLHTAETGEFLKRILKKTGVECSPPLTNARMLDKL 449

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +       +RFE + C  E+ NA  EL DP
Sbjct: 450 VGEFIEETCV--NPTFITGHPQMMSPLAKYHRQHSGLCERFEAFVCKKEIVNAYTELNDP 507

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 508 FDQRLRFEEQARQKDQGDDEAQLIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 567

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 568 EVLAFPFMKEDK 579


>gi|161524327|ref|YP_001579339.1| lysyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350917|ref|YP_001946545.1| lysyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|238687033|sp|A9AGV1|SYK_BURM1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|160341756|gb|ABX14842.1| lysyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334939|dbj|BAG44009.1| class II lysyl-tRNA synthetase [Burkholderia multivorans ATCC
           17616]
          Length = 508

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 156/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  + +F+E+++ 
Sbjct: 149 LRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMSDAEFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIQKYA-----PQYTDGQLSDNAYLRSELKRLGVDVTQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAESQLWEPTFIIDYPVEVSPLARASDTVPGITERFELFITGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFKKQVEQKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|118594577|ref|ZP_01551924.1| lysyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440355|gb|EAV46982.1| lysyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 504

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 167/366 (45%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              LKR+ I S +R +  E++F+E+++ 
Sbjct: 150 IRPLPEKFHGLSDQETKYRQRYVDLIVNEDTRDTFLKRSKIMSGIRTFMQEHEFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  T  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 210 MLHPIPGGAT-ARPFKTH---HNALDMEMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM+   + IR  AE V      ++Q    +     +
Sbjct: 266 GLSVRHNPEFTMMEFYAAYTEYNWLMEFTESCIRYVAELVVGSTKVNYQGKEIDFGKSFD 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y++       +  D  D   +     + G  +            +  E+ 
Sbjct: 326 RLTMVEAILKYSD-----KYNETDLLDLDFVKNALDKKGHTLPGKAGLGAYQLALFEEEA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     +P  T+RFEL+    E+ N   EL D  +Q  
Sbjct: 381 EEH--LWDPTYIIDYPIEVSPLARASDTNPDITERFELFIAGREIANGFSELNDAEDQAV 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +++ K+    E    D DF+  L   +P + G  +G DRLVMLVT + +I +V+  
Sbjct: 439 RFKAQVEAKESGDEEAMYYDADFIRALEYGLPPTGGCGIGIDRLVMLVTDSPSIRDVLLF 498

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 499 PHMRAE 504


>gi|116751160|ref|YP_847847.1| lysyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116700224|gb|ABK19412.1| lysyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 496

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 94/369 (25%), Positives = 167/369 (45%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR  I  ++R +  E  F+E+++ 
Sbjct: 139 LRPLPEKYHGLKDVEIRYRQRYVDLIVNEPVREAFRKRATIVQTVRRFLSERDFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   L+L+ +PE   K+LL  G E++F     +RN 
Sbjct: 199 MMQAVPGGAT-AKPFKT---FHNALNMELFLRIAPELYLKRLLVGGFERVFELNRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA--NQKIFSFQNVNCNPFSEP 165
                H PEFTMLE+Y+A+ +YE LM+    +     +      ++ ++Q++  +     
Sbjct: 255 GVSTQHNPEFTMLEFYQAYATYEDLMQLTEELFGVLCDAVNGGSRLVTYQDMTIDLKPPW 314

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
               + ++      +                    A+  GI     +    + ++I    
Sbjct: 315 RRYRLLDSLVEVGEVPREALEHPEHTA------AVARSMGIETKRFEGHGKLLTKIFDVA 368

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP   S L+    +DP  T RFEL+    E+ NA  EL DP +QR
Sbjct: 369 VEPK--LIQPTFISHYPLEVSPLSRRSESDPAVTDRFELFIAGREMANAFSELNDPRDQR 426

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  ++Q +++   E + +DED++  L   MP ++G  +G DR+VML T + +I +VI 
Sbjct: 427 ERFLLQLQARQEGDEEAHFMDEDYIRALEYGMPPAAGEGIGIDRVVMLFTDSPSIRDVIL 486

Query: 345 TPFSQSNQE 353
            P  +  ++
Sbjct: 487 FPHLRPEKK 495


>gi|259501967|ref|ZP_05744869.1| lysine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259170144|gb|EEW54639.1| lysine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 500

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 101/365 (27%), Positives = 167/365 (45%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     + +  YR+R               +R  I  ++REY  ++ F E+++ 
Sbjct: 132 LRPLPNKWEGVTDPETIYRQRYLDLISNPESFKRFHQRTAIIKAVREYMDDHGFTEVETP 191

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   +YL+ + E   K+L+  G E+++     +RN 
Sbjct: 192 ILNTQAGGA-NARPFVTH---HNALDIDMYLRIATELYLKRLIVGGFERVYELGRIFRNE 247

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  ++ +M +   I++ AA+V +     ++Q    +   + +
Sbjct: 248 GMDPHHNPEFTTMETYAAYFDFQDVMDETEGIVKAAAKVVSDDGKITYQGREIDLGGDFK 307

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A      ID G      D          A++  I      T   I +    E +
Sbjct: 308 RITMVDAVKEKTGIDFGDDAMTDDDA-----KKLAEEHKIEFKPYWTKGHILNAFFEEYV 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFELY    EL NA  EL DPI+Q+ 
Sbjct: 363 EDT--LIQPTFVYEYPVEVSPLAKRNKDNPAMTDRFELYVDGSELGNAFSELNDPIDQKE 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +EK    +E  P+D D++  L   MP + G+ +G DRLVML+T A +I +VI  
Sbjct: 421 RFEMQAKEKANGNDEAEPVDLDYVQALEYGMPPTGGLGIGIDRLVMLLTDAKSIRDVILF 480

Query: 346 PFSQS 350
           P  + 
Sbjct: 481 PTMRP 485


>gi|163791063|ref|ZP_02185484.1| lysyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873708|gb|EDP67791.1| lysyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 499

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 165/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R               KR+ I   +R Y  E  ++E+++ 
Sbjct: 146 LRPLPDKYHGLTNVEQRYRQRYLDLISNRESFDRFTKRSQIIREVRNYLNEQDYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G     R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 206 TLHNLAGGAA-ARPFITH---HNALDMELYLRIALELHLKRLIVGGMERVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +E +M     +IR  A+ V      ++     +  S  +
Sbjct: 262 GVDTTHNPEFTMLEAYTAYTDFEDVMDLVEGLIRTVAQRVLGTGKITYNEQAIDLESPWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +A   ++ +D    + N            A++  + V     +  + +    + +
Sbjct: 322 RQHMVDAIKEHSGVDFWQQMTN------EEARALAKEHDVPVTEHSQFGHVVNEFFEKFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFE +    E  NA  EL DPI+QR 
Sbjct: 376 EDK--LIQPTFIYGHPLEISPLAKKNVEDPRFTDRFEAFIVGHEYGNAFSELNDPIDQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +MQE+    +E + IDEDF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEAQMQERALGNDEAHMIDEDFIESLEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 493

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 494 PTMRNQ 499


>gi|118587147|ref|ZP_01544576.1| lysyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118432426|gb|EAV39163.1| lysyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 496

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLTDIDTRYRKRYLDLISNPKSFEVFIKRSKIVKAIRNYMDSIGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ S G     R F T     + +   +YL+ + E   K+L+  G E+++     +RN 
Sbjct: 204 ILQNSAGGAA-ARPFVTH---HNALDIDMYLRIATELYLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+     +M +  NIIR AA+  N+  +  +Q    +   +  
Sbjct: 260 GMDTRHNPEFTTLESYGAYWDLSDVMIETENIIRAAAKSINEDGVIDYQGHKIDLSKDFA 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             ++ E       ID    +      D       A +  ++         I +      +
Sbjct: 320 KRSMTELIKEKTGIDFDKKI------DLETAQKLANENNVKYESFWGVGHIIAEFFDTFV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S LA     +P F +RFELY    E  NA  EL DPI+QR 
Sbjct: 374 EKS--LIEPTFVYHFPLEVSPLAKKEDNNPDFVQRFELYIAGGEYGNAFTELNDPIDQRQ 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  E++   +E   IDED++  L   M  + G+ +G DRL ML+T   ++ +V+  
Sbjct: 432 RFEAQAAERENGNDEAESIDEDYIEALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLF 491

Query: 346 PFSQS 350
           P  ++
Sbjct: 492 PTMRN 496


>gi|198467359|ref|XP_001354371.2| GA11433 [Drosophila pseudoobscura pseudoobscura]
 gi|198149207|gb|EAL31424.2| GA11433 [Drosophila pseudoobscura pseudoobscura]
          Length = 584

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 85/374 (22%), Positives = 156/374 (41%), Gaps = 28/374 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R                R  I S +R++     F+EI++ 
Sbjct: 196 LHMLPHLHFGLKDKETRYRQRYLDLILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETP 255

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+++ +PE   K L+  G ++++     +RN 
Sbjct: 256 MMNMVAGGAT-AKPFVTH---HNELKMDLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNE 311

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  +M     +I    +          +           
Sbjct: 312 GIDLTHNPEFTTCEFYMAYADYADVMDITEQLISGMVKSIRGSYKIKYHPEGPEGPEQEL 371

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +       +   +      +     L     +  +      T + +  
Sbjct: 372 DFTPPFKRVSMIKTLEEKLKVQFPSAETFNTRATTDFLSQLCVKHQVECPAPRTTARLLD 431

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 432 KLVGEFIEEEC--INPTFICEHPQIMSPLAKYHRSAPGLTERFELFVAKKEICNAYTELN 489

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 490 DPVVQRERFEQQASDKAAGDDEAQMVDENFCTALEYGLPPTGGFGMGIDRLTMFLTDSNN 549

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 550 IKEVLLFPAMKPEE 563


>gi|332529458|ref|ZP_08405417.1| lysyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332041104|gb|EGI77471.1| lysyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 512

 Score =  330 bits (845), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 164/368 (44%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+   SS+R+Y V+N F+E+++ 
Sbjct: 154 LRPMPDKFHGMADQEMKYRQRYVDLITDEEARKRFAARSKAVSSIRDYMVQNGFLEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + ++L+ +PE   K+L+  G E++F    ++RN 
Sbjct: 214 MLHPIPGGA-NAKPFVTH---HNALDQEMFLRIAPELYLKRLIVGGFERVFEINRSFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM    ++IR  A+        ++     +     E
Sbjct: 270 GISVRHNPEFTMMEFYAAYWDYQDLMTYTESLIRHVAQKAVGSLQLTYGGKPVDLSQPFE 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +++         +    D   L     + G+  A D   S   + + +   
Sbjct: 330 RLTIREAIVKHS------EAGSAHVDDAAWLINALSKLGLSEAKDKLSSKSLAGLQVLYF 383

Query: 227 EP--NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E      +   T +  +P   S LA      P  T+RFELY    E  N   EL D  EQ
Sbjct: 384 EEVVEEKLWQPTFVMEHPVEISPLARASDKHPEVTERFELYITGREFGNGFSELNDAEEQ 443

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+ +++ K    +E    D D++  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 444 ARRFQSQVEAKDSGDDEAMYYDHDYVRALEYGMPPTGGCGVGLDRLMMLLTDSPSIRDVI 503

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 504 LFPALRRE 511


>gi|88860264|ref|ZP_01134902.1| lysyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88817462|gb|EAR27279.1| lysyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 511

 Score =  330 bits (845), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 89/380 (23%), Positives = 158/380 (41%), Gaps = 34/380 (8%)

Query: 1   MHQIPSQPWWNRD-------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D              +   R     R+ +   +R + V+  F+E+++ 
Sbjct: 139 LRPLPEKFHGLSDQETKYRQRYVDLITNMDTRETFRIRSKVIDGIRRFLVDRDFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MLHIIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-----------SFQN 156
                H PEFTM+E+Y+A+  Y  +M    +++R  A+                      
Sbjct: 255 GLSTRHNPEFTMIEFYQAYADYIDMMNLTEDMLRTVAQDVLGTTLIVNTVKNADGEVTDT 314

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS- 215
           +  +       +++++A  +Y N D    +    +     L   A+Q  +++  +  W  
Sbjct: 315 IEYDFGQPFTRLSMSDAILKY-NPDFKPEVFKDPENHFEELKAYAKQLHVKIPENCVWGP 373

Query: 216 -DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
                 I  E  E    +   T +  YP   S LA     +   T RFE +    EL N 
Sbjct: 374 GKFLCEIFEETAEHK--LIQPTFITEYPWEVSPLARRNDENGFITDRFEFFVGGRELANG 431

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLV 333
             EL D  +Q  RF ++++EK    +E    DED++  L   +P ++G  +G DRLVML 
Sbjct: 432 FSELNDAQDQAERFSRQVEEKDAGDDEAMHYDEDYIRALEFGLPPTAGEGIGIDRLVMLF 491

Query: 334 TGANNINEVIWTPFSQSNQE 353
           T ++ I +V+  P  +   E
Sbjct: 492 TNSSTIKDVLLFPHMRPEAE 511


>gi|86132072|ref|ZP_01050668.1| lysyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85817406|gb|EAQ38586.1| lysyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 564

 Score =  330 bits (845), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 167/379 (44%), Gaps = 37/379 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  + +++R +F + 
Sbjct: 136 LKPLPQPRTDDEGKVHDAFTDPEMRYRQRYVDLTVNPHVKEVFVKRTKLFNAMRNFFNDA 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            + E+++  LQ   G     R F T     + +  PLY++ + E   K+L+  G E ++ 
Sbjct: 196 GYFEVETPVLQPIAGGAA-ARPFITH---HNSLDMPLYMRIANELYLKRLIVGGFEGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M  C  ++   A         +F    
Sbjct: 252 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFCEQLLETCAIAVNGTTEATFGEHE 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    +T+A++   +   D+              +   A+  GI V        + 
Sbjct: 312 VDFKAPYARVTMADSIKHFTGFDING-------KTEDEIRAAAEGMGIEVDDTMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGEKCEGNY--IQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPI+QR RFE +++  K+  +E    ID DFL  L   MP +SG+ +G DRL+M +T  
Sbjct: 423 NDPIDQRERFEAQLELAKRGDDEATASIDYDFLRSLEYGMPPTSGMGIGMDRLIMFLTNN 482

Query: 337 NNINEVIWTPFSQSNQEEI 355
            +I EV++ P  +  ++ +
Sbjct: 483 QSIQEVLFFPQMKPEKKAL 501


>gi|78183738|ref|YP_376172.1| lysyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|123729968|sp|Q3B0J9|SYK_SYNS9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78168032|gb|ABB25129.1| Lysyl-tRNA synthetase, class-2 [Synechococcus sp. CC9902]
          Length = 502

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 159/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R ++ S +R +  E QF+EI++ 
Sbjct: 138 LQPLPDKWHGLADVEKRYRQRYLDLIVSPQSRETFRRRALLVSGIRRWLDERQFLEIETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  PLYL+ + E   K+L+  G E+++     +RN 
Sbjct: 198 VLQSEAGGA-DARPFITH---HNTLDLPLYLRIATELHLKRLVVGGFERVYELGRIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M+    +I     +V       +Q  + +      
Sbjct: 254 GMSTRHNPEFTSVEVYQAYSDYIGMMELTEAMIAEVCQQVCGGTRIHYQGTDIDLTPPWR 313

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
             T+ E       ++            R       + AG+ V    D+   + +    ++
Sbjct: 314 RATMHELVEEATGLNFEAF------TTRAQAAEAMEAAGLEVPGAADSVGRLLNEAFEQR 367

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E +  +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL+DP++QR
Sbjct: 368 VEAS--LIQPTFVTDYPIEISPLARKHRSKPGLVERFELFIVGRETANAFSELIDPVDQR 425

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   K     E   +DEDF+  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 426 QRLEAQQARKAAGDLEAQGLDEDFVHALEVGMPPTGGLGIGIDRLVMLLTDSPSIRDVIA 485

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 486 FPLMRPE 492


>gi|303257505|ref|ZP_07343517.1| lysine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302859475|gb|EFL82554.1| lysine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 511

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 156/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              + R+   +  R++ +E+ F+E+++ 
Sbjct: 156 IRPLPDKFHGLSDPETRYRQRYVDLIMNESTRRTFMIRSKAIAETRKFMMEHHFMEVETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + +   +YL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 216 MLHPIPGGA-NAKPFITH---HNALDMDMYLRIAPELYLKRLVVGGFERVFELNRSFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A++ Y  LM     ++R  A +     +  +Q    +     +
Sbjct: 272 GVDVRHNPEFTMMEFYAAYKEYHWLMDYTEKLLRTVAEKTIGTAVIQYQGHTIDLTKPFD 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T  EA  +YA              D+  +  + ++ G     D     +   I     
Sbjct: 332 RLTAKEAVLKYA-----PQYTPEQLEDKDFMQEELKRLGEPAKADAGVGALQMAIFEAVA 386

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA      P  T+RFEL+    E  N   EL DP +Q  
Sbjct: 387 ESK--LIQPTYIIDYPVEISPLARASDKVPGITERFELFMAGRETANGFSELNDPQDQAA 444

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + + K    +E    D D++  L   +P + G  +G DR VML+T + +I +V+  
Sbjct: 445 RFMAQAKLKASGDDEAMYYDADYVRALEYGLPPTGGCGVGLDRFVMLLTDSPSIRDVLLF 504

Query: 346 PFSQSN 351
           P  +  
Sbjct: 505 PHMRPE 510


>gi|296328451|ref|ZP_06870972.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296154417|gb|EFG95214.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 493

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 155/366 (42%), Gaps = 28/366 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R              +KR  I  ++R+Y  +  F+E+++  
Sbjct: 139 RSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRETFIKRTKIIKAIRKYLDDRGFLEVETPI 198

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     + F T     + +   L+L+ +PE   KKL+  G E+++     +RN  
Sbjct: 199 MHPILGGAA-AKPFITH---HNTLNIDLFLRIAPELYLKKLIVGGFERVYDLNRNFRNEG 254

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y+AH  +  +M  C  II    +  N       +           +
Sbjct: 255 ISTRHNPEFTMVELYQAHADFNDMMDLCEGIISSVCQEVNGTTDIEYDGVQLSLKNFNRV 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIE 227
            + +       +D    +              A++  + VA        I +    +K E
Sbjct: 315 HMVDMIKEVTGVDFWKEMT------FEEAKKLAKEHHVEVADHMNSVGHIINEFFEQKCE 368

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P FT RFEL+    E  NA  EL DP +QR R
Sbjct: 369 EK--VIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKREYANAFTELNDPADQRGR 426

Query: 288 FEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE +++E  +   E  P IDE F+  L   +P + G+ +G DRLVML+TGA +I +VI  
Sbjct: 427 FEAQVEEAMRGNEEATPEIDESFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PQMKPR 492


>gi|300362398|ref|ZP_07058574.1| lysine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353389|gb|EFJ69261.1| lysine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 513

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++    +D    YR+R              + R  I  ++R Y     F+E+++ 
Sbjct: 142 LRPLPNKWDGLKDVEQIYRQRYLDLITNHESYMRFVHRTQIIQAIRNYLNNQDFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+  G E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGGMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GVDTRHNPEFTELETYAAYWDFHDVMDEAEGIIRAAAKVVSLDGKINYQGTDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    + + +          A++ GI          + +    E  
Sbjct: 318 RVHMVDLIKEKTGVDFWKEMTDEE------AKKIAEEHGIHTEPFWKVGHVINAFFDEFC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++   +E  NA  EL DP++QRH
Sbjct: 372 EKT--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIFILGMEYGNAFSELNDPVDQRH 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++M+E++   +E   IDED++  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEEQMEEREAGNDEADMIDEDYIRAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPEKVE 498


>gi|221198423|ref|ZP_03571469.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221208900|ref|ZP_03581897.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221214769|ref|ZP_03587738.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221165308|gb|EED97785.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221171183|gb|EEE03633.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221182355|gb|EEE14756.1| lysyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 508

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 156/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  + +F+E+++ 
Sbjct: 149 LRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMSDAEFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIQKYA-----PQYTDGQLSDDAYLRSELKRLGVDVTQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAESQLWEPTFIIDYPVEVSPLARASDTVPGITERFELFITGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFKKQVEQKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|225181740|ref|ZP_03735179.1| lysyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167611|gb|EEG76423.1| lysyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 487

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              + R+ I   +R +   + F+E+++ 
Sbjct: 133 LRPLPEKWHGLTNVDMRYRQRYLDMIVNPDVKKTFVLRSKIVQEIRNFLNSDGFLEVETP 192

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 193 VMHTLAGGAS-AKPFITH---HNALDMNLYLRIATELHLKRLVVGGMDKVYELGRIFRNE 248

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A   YE +M     +I   A+         +Q    +  S   
Sbjct: 249 GISTKHNPEFTSVEIYQAQADYEDMMTLTEELITTVAQKVLGTLKVPYQEQELDLTSPWP 308

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +YA I+                   A+Q G+ V    +  +I + +  E +
Sbjct: 309 RLTMVEAIEKYAGINFNNIQT------AEEAREAAKQKGLEVKAGTSRGEIMNELFEEFV 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFE +    E+ NA  EL DP++QR 
Sbjct: 363 EGQ--LFQPTFIMDYPIEVSPLAKKKADDPSMTYRFEAFMARSEIANAFTELNDPLDQRE 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE+++ +++    E + +DEDFL  L   MP + G+ +G DRL+M++T + +I +VI  
Sbjct: 421 RFEQQVLKREAGDEEAHMLDEDFLLSLEYGMPPTGGLGIGIDRLIMMLTDSPSIRDVILF 480

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 481 PTLREKE 487


>gi|169769871|ref|XP_001819405.1| lysine--tRNA ligase KRS1 [Aspergillus oryzae RIB40]
 gi|238487798|ref|XP_002375137.1| lysyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|83767264|dbj|BAE57403.1| unnamed protein product [Aspergillus oryzae]
 gi|220700016|gb|EED56355.1| lysyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 604

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 87/372 (23%), Positives = 159/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H IPS+ +   +++  +R+R              + R+ I S +R +F    F+E+++ 
Sbjct: 214 LHAIPSEHYGFQDKEQRFRQRYLDLIMNDRSRNVFVTRSKIVSYIRNFFDTRDFVEVETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 274 MMNAIAGGAT-AKPFVTH---HNDLDMNLFMRVAPELYLKMLIVGGLERVYEMGRQFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     ++    +       +  +       N N 
Sbjct: 330 GIDLTHNPEFTTCEFYWAYADVYDVMNLTEELVSGLVKHVTGGYETVFHTQTGEEYNVNW 389

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    + +  A                       L    ++ G+  +   T + +  ++
Sbjct: 390 KAPWRRVEMIPALEEATGEKFPPGDQLHTAETGEFLKKVLKKTGVECSPPLTNARMLDKL 449

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +  +    +RFE + C  E+ NA  EL DP
Sbjct: 450 VGEFIEETCV--NPTFITGHPQMMSPLAKYHRQNVGLCERFEAFVCKKEIVNAYTELNDP 507

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 508 FDQRLRFEEQARQKDQGDDEAQLIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 567

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 568 EVLAFPFMKEDK 579


>gi|262038760|ref|ZP_06012117.1| lysine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261747218|gb|EEY34700.1| lysine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 493

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 98/372 (26%), Positives = 167/372 (44%), Gaps = 29/372 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R             + KR  I    R+Y  E  F E+++ 
Sbjct: 134 IRPLPEKFHGLTNVETRYRQRYVDLVMNSEVMDTMKKRFQIVRFFRKYLEEKGFTEVETP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  R F+T     + +   L+L+ +PE   K+LL  G EK+F    ++RN 
Sbjct: 194 MMHPIAGGAT-ARPFTTH---HNALDMELFLRVAPELYLKRLLVGGFEKVFEINRSFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  Y  +M    ++I +   E+       ++    N  S   
Sbjct: 250 GISIKHNPEFTMMELYQAYADYVDMMNITEDLISKLTFELHGTYEIEYEGKKINMESPWR 309

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD--IFSRILIE 224
            + + +        D  T   + D   +      A++  I +  D T++   I + I  E
Sbjct: 310 RVKMKDIVKEVTGFDFDTVTSDEDAVTK------AKELQIPLEKDRTYTKYGILNLIFEE 363

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           K+E    +   T +  YP   S L+     +  +  RFEL+    E  NA  EL DP +Q
Sbjct: 364 KVEST--LINPTFIIEYPKEISPLSKNKKGETDWVDRFELFISGREFANAYSELNDPRDQ 421

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           + RFE++++ K+   +E   +D D++  L   MP + G+ +G DRLVML+T + +I +VI
Sbjct: 422 KERFEEQVKMKEAGDDEAQNMDLDYIRALEYGMPPAGGLGIGIDRLVMLMTNSASIRDVI 481

Query: 344 WTPFSQSNQEEI 355
             P  +    E+
Sbjct: 482 LFPTLRKEDIEL 493


>gi|259047581|ref|ZP_05737982.1| lysine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035772|gb|EEW37027.1| lysine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 501

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 162/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              + R+ I   +R Y  +  ++E+++ 
Sbjct: 147 LRPLPDKYHGLTNVEQQYRQRYLDLISNRDSFDRFVTRSKIIREIRRYLDDRDYLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LY++ + E   K+L+  G E+++     +RN 
Sbjct: 207 VLHTLAGGA-NARPFITH---HNALDMELYMRIATELHLKRLVVGGMERVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y+ +M     II   A +V    +  +        +  +
Sbjct: 263 GIDTTHNPEFTSIEIYTAYTDYKDVMDLTEGIISDVAEKVLGTTLVPYGEHEVELKAPWK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    + + +          A++ G++V    T+  + +      +
Sbjct: 323 RIHMVDAIKEVTGVDFWPHMTDEE------ARAIAKEKGVKVEDSMTFGHVVNEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFE + C  E  N   EL DPI+QR 
Sbjct: 377 EET--LIQPTFIYGHPVEVSPLARKNDEDPRFTDRFECFICTKEYGNGFTELTDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++EK    +E +P DEDF+  L   +  + G+ +G DRLVML+T + +I  V+  
Sbjct: 435 RFMKQVEEKSAGNDEAHPHDEDFIQALEYGLSPTGGVGIGIDRLVMLLTNSQSIRNVLLF 494

Query: 346 PFSQS 350
           P  ++
Sbjct: 495 PTMKN 499


>gi|116490302|ref|YP_809846.1| lysyl-tRNA synthetase (class II) [Oenococcus oeni PSU-1]
 gi|116091027|gb|ABJ56181.1| Lysyl-tRNA synthetase (class II) [Oenococcus oeni PSU-1]
          Length = 496

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLTDIDTRYRKRYLDLISNPKSFEVFIKRSKIVKAIRNYMDSIGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ S G     R F T     + +   +YL+ + E   K+L+  G E+++     +RN 
Sbjct: 204 ILQNSAGGAA-ARPFVTH---HNALDIDMYLRIATELYLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+     +M +  NIIR AA+  N+  +  +Q    +   +  
Sbjct: 260 GMDTRHNPEFTTLESYGAYWDLSDVMIETENIIRAAAKSINEDGVIDYQGHKIDLSKDFA 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             ++ E       ID    +      D       A +  ++         I +      +
Sbjct: 320 KRSMTELIKEKTGIDFDKKI------DLETARKLANENNVKYESFWGVGHIIAEFFDTFV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S LA     +P F +RFELY    E  NA  EL DPI+QR 
Sbjct: 374 EKS--LIEPTFVYHFPLEVSPLAKKEDNNPDFVQRFELYIAGGEYGNAFTELNDPIDQRQ 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  E++   +E   IDED++  L   M  + G+ +G DRL ML+T   ++ +V+  
Sbjct: 432 RFEAQAAERENGNDEAESIDEDYIEALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLF 491

Query: 346 PFSQS 350
           P  ++
Sbjct: 492 PTMRN 496


>gi|330718514|ref|ZP_08313114.1| lysyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 494

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 162/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I S++R+Y   N+F+E+++ 
Sbjct: 142 LRPMPDKFHGIADVETRYRKRYLDLIANEDSFKKFQQRSRIISAIRDYMDSNEFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   +Y++ + E   K+L+  G E+++     +RN 
Sbjct: 202 ILQTEAGGAA-ARPFITH---HNALNIDMYMRIATELYLKRLVVGGMERVYEMGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  +  +M +   I + AA+V +     ++Q  + N      
Sbjct: 258 GMDPKHNPEFTTMESYAAYWDFTDVMNETEGIFKAAAKVVSDDLTINYQGTDINLAKPFA 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +    Y  +D        ++         A +  +          I +      +
Sbjct: 318 RQHMVDLIKTYTGVDFW------EEMSIEQARQLADEHHVTYEAYWQVGHIINEFFETFV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EEK--LIEPTFVYGHPVEVSPLAKKNSDDPRFTDRFELFIVGSEYANAFTELNDPIDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E++   +E   IDEDF+  L   MP + G+ +G DRL+ML+T ++ I +V+  
Sbjct: 430 RFEAQVAERENGNDEAESIDEDFIEALEYGMPPTGGLGVGIDRLIMLLTNSDTIRDVVLF 489

Query: 346 PFSQS 350
           P  + 
Sbjct: 490 PTMRP 494


>gi|227894509|ref|ZP_04012314.1| lysine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227863668|gb|EEJ71089.1| lysine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 520

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 161/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 147 LRPLPDKYHGLKDVEAIYRQRYLDLITNRDSYMRFVHRTQIIQAIRDYLNGQDFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 207 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  N +      
Sbjct: 263 GLDTHHNPEFTELESYAAYWDFHDVMDEAEGIIRAAAKVVSPDGKITYQGQNIDLGKPFR 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +   +          A+   I V        I +    +  
Sbjct: 323 RVHMVDLIKEKTGVDFWKPMTLEEAT------KIAEDHDIHVEKFWKVGHIINAFFEKYC 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 377 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRA 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E++   +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 435 RFEAQMEEREAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 494

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 495 PTMRPEKVE 503


>gi|157106533|ref|XP_001649366.1| lysyl-tRNA synthetase [Aedes aegypti]
 gi|108868817|gb|EAT33042.1| lysyl-tRNA synthetase [Aedes aegypti]
          Length = 588

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 84/373 (22%), Positives = 154/373 (41%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              L R  I S +R++     F+E+++ 
Sbjct: 199 LHMLPHLHYGLKDKETRFRQRYLDLILNGNVRNIFLVRAKIISYVRQFLDGMGFLEVETP 258

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K L   G ++++     +RN 
Sbjct: 259 MMNMIAGGAT-AKPFITH---HNDLNMNLFLRIAPELYLKMLTVGGLDRVYEIGRQFRNE 314

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  L+     ++    +  +       +         + 
Sbjct: 315 GIDLTHNPEFTTCEFYMAYADYNDLIDLTEKMVSGMVKSIHGSYKIKYHPEGPDGKEYDI 374

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I++  +      +   +            L     +  +      T + +  
Sbjct: 375 DFTPPFKRISMLSSLEEILKVKFPSPESFNTAETNKFLSDLCIKHEVECPAPRTTARLLD 434

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E N      T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 435 KLVGEFLEENC--INPTFICDHPQIMSPLAKYHRSAAGLTERFELFIMKKEICNAYTELN 492

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP  QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T  NN
Sbjct: 493 DPAVQRERFEQQAADKAAGDDEAQMVDENFCTALEYGLPPTGGWGMGIDRLTMFLTDNNN 552

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 553 IKEVLLFPAMKPD 565


>gi|218888077|ref|YP_002437398.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218759031|gb|ACL09930.1| lysyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 501

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 157/367 (42%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR +I    R +  +  F+E+++ 
Sbjct: 146 IRPLPEKYHGLKDVETRYRQRYVDLIVTPRTREIFRKRTLIVREFRRFLEDKGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T    F T     + +   LY++ +PE   K+LL  G EK+F     +RN 
Sbjct: 206 MMQPIPGGAT-AMPFITH---HNALDMQLYMRIAPELYLKRLLVGGFEKVFEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--P 165
                H PEFTM E+Y A+ ++E LM     +    AE                 +    
Sbjct: 262 GISTRHNPEFTMCEFYWAYATFEDLMDLTEQLFAHVAEKVCGSYVVTYQGQEVDLTPGRW 321

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             ++  ++  +                D   +    ++ G +V   +  + + +++    
Sbjct: 322 TRLSFHDSLEKIGGHKP------EFYNDYEAVRKYIRERGEKVVDGEKMAKLQAKLFDLD 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S L+      P  T RFEL+    EL NA  EL DP++QR
Sbjct: 376 VEGK--LIQPTFIYHYPTDISPLSRRNNERPDVTDRFELFITGRELGNAFSELNDPVDQR 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  ++ EK+    E + +DED+L  L   MP ++G  +G DRLVML+T + +I EVI 
Sbjct: 434 MRFMDQVAEKEAGDAEAHFMDEDYLRALEYGMPPAAGEGVGIDRLVMLLTDSPSIREVIL 493

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 494 FPLLKPE 500


>gi|332284054|ref|YP_004415965.1| lysyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330428007|gb|AEC19341.1| lysyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 506

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 151/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              L R+    S+R + +   F+E+++ 
Sbjct: 147 LRPLPDKFHGVADTELRYRQRYVDLIMTEETRRCFLARSKAIGSIRHHMINAGFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G +++F     +RN 
Sbjct: 207 MLHPIPGGAA-AKPFVTH---HNALDMEMFLRIAPELYLKRLVVGGFDRVFEVNRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA  A    + ++Q    +     +
Sbjct: 263 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTETLIREAAIAASGSAVLTYQEKVLDLSQPFD 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA              D   L  + ++ G  V            + +   
Sbjct: 323 RLTIVQAILKYA-----PGYTQEQLQDGTFLRTELKRLGADVNGPVLARAGLGGLQLALF 377

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 378 EETAEAKLWNPTYIIDYPVEVSPLARASDTQEGITERFELFMTGREIANGFSELNDPEDQ 437

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  +++ K     E    D D++  L   MP + G  +G DRLVML+T + +I +VI
Sbjct: 438 AARFLAQVEAKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVI 497

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 498 LFPHLRRE 505


>gi|296823266|ref|XP_002850417.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238837971|gb|EEQ27633.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 608

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 90/372 (24%), Positives = 158/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  +D   R              R   + R+ I S +R YF E  F+E+++ 
Sbjct: 217 LHQIPSEHYGLKDQEQRFRQRYLDLIMNDSSRNVFVTRSKIVSYIRRYFDERDFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 277 MMNAIAGGAT-AKPFITH---HNDLNMNLFMRIAPELYLKMLIVGGLERVYEMGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     LM    +++    +       +  +         N 
Sbjct: 333 GIDLTHNPEFTTCEFYWAYADVYDLMNVTEDLVSGLVKHVTGGYETVFHTQSGEEYKVNW 392

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +  + I +  A                 +     L    ++  +      T + +  ++
Sbjct: 393 KAPWKKIEMIPALEEATGEKFPPGDQLHTEETNEFLKRVLKKVNVECTPPLTNARMLDKL 452

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        + +  +P   S LA  +       +RFE + C  E+ NA  EL DP
Sbjct: 453 VGEFIEEEC--INPSFIIGHPQMMSPLAKYHRDHVGLCERFEAFVCKKEIVNAYTELNDP 510

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K++  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 511 FDQRLRFEEQARQKEQGDDEAQMIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 570

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 571 EVLAFPFMKEDK 582


>gi|163783340|ref|ZP_02178333.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881448|gb|EDP74959.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 570

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 158/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +    +D    YR+R              L R+ + S LR +F +  F+E+++ 
Sbjct: 216 LHPLPEKWHGLKDVEVRYRQRYLDLIANPDARKTFLLRSRLISELRRFFDDRGFVEVETP 275

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ       + + F T     +++   LYL+ +PE   K+L+  G  +++     +RN 
Sbjct: 276 ILQTVASGA-NAKPFMT---YHNYLEMNLYLRIAPELYLKRLIVGGFPRVYELGKNFRNE 331

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LMK    +              S++ V  +      
Sbjct: 332 GVDRTHNPEFTMVEFYAAYWDYNDLMKFTEKLFVHLLERTVGTLKLSYEGVELDFSPPFR 391

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++  +        D    L      D   L   A +  I      T + +  ++     
Sbjct: 392 RVSYFDLLKEKTGKDKEFFL-----KDIEGLRKLAGELDITHHERLTHAKLIDKVFERVA 446

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA  +  DP   +RFEL     E+ NA  EL DP +Q+ 
Sbjct: 447 EE--DLVQPTFVIDFPKLLSPLAKTHREDPDLVERFELIVATYEVANAYTELNDPADQKE 504

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++EK+    E   +DEDF+  L   MP ++G  +G DRLVML+T  + I +VI  
Sbjct: 505 RFLEQLKEKEMGDEEAMDMDEDFIRALEYGMPPTAGEGIGIDRLVMLLTNTDTIRDVILF 564

Query: 346 PFSQSN 351
           P  +  
Sbjct: 565 PHMRPQ 570


>gi|83719490|ref|YP_442413.1| lysyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167581336|ref|ZP_02374210.1| lysyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
 gi|167619418|ref|ZP_02388049.1| lysyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257138615|ref|ZP_05586877.1| lysyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|123767660|sp|Q2SXD6|SYK_BURTA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|83653315|gb|ABC37378.1| lysyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 508

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 154/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  +  F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQETRYRQRYVDLIVTPETRTTFRARTKAIASIRKFMGDADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMEMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR  A +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIQYQGRELDLAQPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA      +  +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIQKYA-----PSYTDGQLSDDAFLRSELKRLGVDVTQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAEAQLWEPTFIIDYPIEVSPLARESDTVAGITERFELFITGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|300812103|ref|ZP_07092551.1| lysine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496942|gb|EFK32016.1| lysine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 507

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 161/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 141 LRPLPDKYHGLKDVESIYRQRYLDLITNHESYQRFVNRTKIIQAIRDYLNGQDFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 201 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V ++    ++Q  + +      
Sbjct: 257 GMDLKHNPEFTELETYAAYYDFHDVMDEAEGIIRAAAKVVSEDGKINYQGTDLDLGKPFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A +  + V        I +    E  
Sbjct: 317 RVHMVDLIKELTGVDFWQPMT------LEEARKVAAEHHVEVEPYWQVGHIINAFFEEFG 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++    E  NA  EL DP++QR 
Sbjct: 371 EKT--IVDPTFVYGHPVEVSPLAKKNADDPRFTDRFEIFIMGNEYGNAFSELNDPLDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDED+L  +   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 429 RFEAQMAERDAGNDEADIIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTNAASIRDVLLF 488

Query: 346 PFSQSNQ 352
           P  + ++
Sbjct: 489 PTMRPDK 495


>gi|226328241|ref|ZP_03803759.1| hypothetical protein PROPEN_02134 [Proteus penneri ATCC 35198]
 gi|225202974|gb|EEG85328.1| hypothetical protein PROPEN_02134 [Proteus penneri ATCC 35198]
          Length = 402

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 91/367 (24%), Positives = 161/367 (43%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + + +R++ V   F+E+++ 
Sbjct: 47  LRPLPDKFHGLADQEMRYRQRYLDLISNEESRKTFQIRSQVMAGIRQFMVNKGFMEVETP 106

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 107 MMQTIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 162

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++    + R     V    +  + +   +      
Sbjct: 163 GVSPRHNPEFTMMELYMAYADYRDLIELTEELFRTLTENVLGSSLVKYGDQEFDFGKPFA 222

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y            D  D       AQ  GI++        +   I  E  
Sbjct: 223 KLTMKEAICKY-----RPETVMADLDDMDKAVAIAQSIGIKIEKSWGLGRVQCEIFEEVA 277

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 278 ESH--LIQPTFIIEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAQDQAE 335

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++++K+    E    D D++  L   +P ++G+ +G DR+VML T ++ I +VI  
Sbjct: 336 RFEDQVRQKEAGDAEAMFFDHDYITALEHGLPPTAGLGIGIDRMVMLFTDSHTIRDVILF 395

Query: 346 PFSQSNQ 352
           P  + N+
Sbjct: 396 PAMRPNK 402


>gi|300727005|ref|ZP_07060425.1| lysine--tRNA ligase [Prevotella bryantii B14]
 gi|299775728|gb|EFI72318.1| lysine--tRNA ligase [Prevotella bryantii B14]
          Length = 576

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 147/376 (39%), Gaps = 36/376 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +   R+R              LKR ++  ++R +F    
Sbjct: 141 LKPLPIVKYKDGVAYDKFDDPEMRARQRYVDLVVNDGVKDTFLKRAVVLRTMRAFFDAQG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ   G  +  R F T     + +   +Y++ + E   K+L+  G + ++  
Sbjct: 201 YTEVETPILQSIAGGAS-ARPFITHF---NALNIDMYMRIATELYLKRLIVGGFDGVYEI 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-- 158
              +RN      H PEFT +E Y  ++ Y  +M     ++       N K          
Sbjct: 257 GKNFRNEGMDKNHNPEFTCMELYVPYKDYNWMMSFTEKLLETICVAVNGKPEVEYPDGKV 316

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    + + EA       D               +       G+ V        + 
Sbjct: 317 ISYKAPFRRLPILEAIQEKTGFDCNG-------KTEEEIREFCLSKGMEVDETFGKGKLI 369

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             +  E  E        T +  YP   S L  ++ + P  T+RFEL     E  NA  EL
Sbjct: 370 DELFGEFCEGT--FIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMINGKECANAYSEL 427

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q  RF ++M+   K  +E   ID+DFL  L   MP +SGI +G DRL ML+TG  
Sbjct: 428 NDPIDQEERFIEQMKLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLTMLMTGKE 487

Query: 338 NINEVIWTPFSQSNQE 353
            I EV+  P  +   +
Sbjct: 488 YIQEVMLFPQMKPEAK 503


>gi|290889690|ref|ZP_06552779.1| hypothetical protein AWRIB429_0169 [Oenococcus oeni AWRIB429]
 gi|290480687|gb|EFD89322.1| hypothetical protein AWRIB429_0169 [Oenococcus oeni AWRIB429]
          Length = 496

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 158/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I  ++R Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLTDIDTRYRKRYLDLISNPKSFEVFIKRSKIVKAIRNYMDSIGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ S G     R F T     + +   +YL+ + E   K+L+  G E+++     +RN 
Sbjct: 204 ILQNSAGGAA-ARPFVTH---HNALDIDMYLRIATELYLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+     +M +  NIIR AA+  N+     +Q    +   +  
Sbjct: 260 GMDTRHNPEFTTLESYGAYWDLSDVMIETENIIRAAAKSINEDGFIDYQGHKIDLSKDFA 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             ++ E       ID    +      D       A +  ++         I +      +
Sbjct: 320 KRSMTELIKEKTGIDFDKKI------DLETARKLANENNVKYESFWGVGHIIAEFFDTFV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S LA     +P F +RFELY    E  NA  EL DPI+QR 
Sbjct: 374 EKS--LIEPTFVYHFPLEVSPLAKKEDNNPDFVQRFELYIAGGEYGNAFTELNDPIDQRQ 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  E++   +E   IDED++  L   M  + G+ +G DRL ML+T   ++ +V+  
Sbjct: 432 RFEAQAAERENGNDEAESIDEDYIEALEHGMAPTGGLGIGIDRLTMLLTNQTSVRDVLLF 491

Query: 346 PFSQS 350
           P  ++
Sbjct: 492 PTMRN 496


>gi|167622750|ref|YP_001673044.1| lysyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082969|sp|B0TTP2|SYK_SHEHH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|167352772|gb|ABZ75385.1| lysyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 501

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 86/367 (23%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + V+ +F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQETRYRQRYVDLIVNEQSREAFIMRSKVVSAIRNFMVKKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F+T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHSIPGGAS-ARPFATH---HNALDIAMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  +  LM     ++   A          +     +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLSSIATELCGSPQLPYGEHTVDFGGPYA 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y   +    ++   +  D   +   A+  G+ V    T   +   I  E 
Sbjct: 315 RLSMLDAIKKYNPDNATIQSMTYEEVKDVEFMRDLAKSLGMTVEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AETQ--LMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 RRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|328463468|gb|EGF35119.1| lysyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 516

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 162/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y  +  F+E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEAIYRQRYLDLITNCDSYMRFVHRTQIIQAIRDYLNKQNFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GLDTHHNPEFTELESYAAYWDFHDVMDEAEGIIRAAAKVVSDDGKITYQGQDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +       +D    +   +          A+   I V        I +    +  
Sbjct: 318 RIHMVDLIKEKTGVDFWKPMTLEEAT------KIAEDHDIHVEKFWKVGHIINAFFEKYC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 372 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E++   +E   +DED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEAQMEEREAGNDEADMVDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPERAE 498


>gi|238917592|ref|YP_002931109.1| lysyl-tRNA synthetase, class II [Eubacterium eligens ATCC 27750]
 gi|238872952|gb|ACR72662.1| lysyl-tRNA synthetase, class II [Eubacterium eligens ATCC 27750]
          Length = 534

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 101/365 (27%), Positives = 166/365 (45%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R++     F+E+++ 
Sbjct: 179 LQVLPEKFHGITDTDMRYRQRYVDLIMNPEVKETFVKRSKIIKEIRKFLDGRDFMEVETP 238

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 239 TLVSNAGGAA-ARPFETHY---NALDEDVKLRISLELYLKRLIVGGLERVYEIGRVYRNE 294

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+   ++ R  A  V      ++     +      
Sbjct: 295 GVDTRHNPEFTLMELYQAYTDYEGMMELTESMFRHLAETVCGTTKITYNGTEIDLGKPFR 354

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A   YA +D  T   + +          A++ GI      T  DI +    E  
Sbjct: 355 RLTMNDAIKEYAGVDFDTIKTDEE------AKALAKERGIEFEERHTKGDIINLFFEEYC 408

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   T +  +P   S L    P+DP   +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 409 EEN--LIQPTFIMDHPLAISPLTKKKPSDPEKVERFELFINTWEMCNAYSELNDPIDQRE 466

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ +  +    E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 467 RFAQQDKNAENGDEEAQHTDEDFLNALAVGMPPTGGIGYGIDRLVMLLTDSPAIRDVLLF 526

Query: 346 PFSQS 350
           P  +S
Sbjct: 527 PTMKS 531


>gi|57168540|ref|ZP_00367673.1| lysyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|305432957|ref|ZP_07402115.1| lysine--tRNA ligase [Campylobacter coli JV20]
 gi|57020045|gb|EAL56722.1| lysyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|304444111|gb|EFM36766.1| lysine--tRNA ligase [Campylobacter coli JV20]
          Length = 502

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 159/368 (43%), Gaps = 27/368 (7%)

Query: 3   QIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R              L R+ + S +R +F E  F+E+++  +
Sbjct: 142 PLPEKYHGLTDIEQRYRKRYVDMIMNAEVRKDFLTRSKVVSLIRHFFEEKGFLEVETPMM 201

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN   
Sbjct: 202 HPIAGGA-NAKPFVT---FHNSLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGM 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A+ +Y+ LM     +     E     KI  F     +     E I
Sbjct: 258 DLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLEKLQLGKIIEFDGQKIDFSKPFERI 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T  +A  +Y        L +    ++  +  + ++ G           + + +    +E 
Sbjct: 318 TYKDALKKYG------ALSDEIIENKDKILEKLKKDGFEANDKLDLGHLQAELFDNYVES 371

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L+     +    +RFEL+ C  EL N  +EL DP++Q  RF
Sbjct: 372 K--LIDPTFITDFPISISPLSRRSDKNSEIAERFELFVCGRELANGFNELNDPLDQYERF 429

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+++ K     E   +DEDF+  L   MP ++G  +G DRLVML+T   +I +VI  P 
Sbjct: 430 LKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPA 489

Query: 348 SQSNQEEI 355
            +  + E+
Sbjct: 490 MRPLKSEL 497


>gi|312071859|ref|XP_003138802.1| hypothetical protein LOAG_03217 [Loa loa]
 gi|307766036|gb|EFO25270.1| hypothetical protein LOAG_03217 [Loa loa]
          Length = 602

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 29/376 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +  +  +  YR R              + R+ + S LR Y     F+E+++ 
Sbjct: 222 LHMLPHTHFGLKNQETRYRMRYLDLIMNPDVKNRFVTRSRMISFLRRYLDNLGFLEVETP 281

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   LYL+ +PE   K L+  G ++++     +RN 
Sbjct: 282 MMNLIAGGAT-AKPFITH---HNDLDMDLYLRVAPELYLKMLVVGGIDRVYEIGRVFRNE 337

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y A+  YE LMK   +++       +       +           
Sbjct: 338 GIDQTHNPEFTSCEFYMAYADYEDLMKITEDMLARMVYYMHGTYKIQYHPNGIVENPVYE 397

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +       + + +       I                    A +  +      T + + 
Sbjct: 398 VDFTPPFRKVNIYDGLQEKLGIQFPPADTLDTDEANKFFDKLAVENNVECPAPRTTARLL 457

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++ E +EP       T L  +P   S LA  + + P  T+RFEL+    E+ NA  EL
Sbjct: 458 DKLIGEFLEPT--FISPTFLTGHPQIMSPLAKWHRSIPGLTERFELFVVTKEIVNAYTEL 515

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP+ QR RF+++ ++K+   +E   IDE++   L   +P ++G  MG DRL M++T +N
Sbjct: 516 NDPLTQRLRFDEQAKQKQAGDDEAQNIDENYCTALEYGLPPTAGWGMGIDRLAMILTDSN 575

Query: 338 NINEVIWTPFSQSNQE 353
           NI EV++ P  + +++
Sbjct: 576 NIKEVLFFPAMRPDEK 591


>gi|78066893|ref|YP_369662.1| lysyl-tRNA synthetase [Burkholderia sp. 383]
 gi|77967638|gb|ABB09018.1| Lysyl-tRNA synthetase, class-2 [Burkholderia sp. 383]
          Length = 524

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++    +F+E+++ 
Sbjct: 165 LRPLPDKFHGLSDQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMDNAEFMEVETP 224

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 225 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 280

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +        +Q    +      
Sbjct: 281 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLAKPFH 340

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA              D   L  + ++ G+ V+     +     + +   
Sbjct: 341 RLTITQAIQKYA-----PDYTAGQLSDDAFLRTELKRFGVDVSQPAFLNAGIGALQLALF 395

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 396 EETAEAQLWEPTFIIDYPVEVSPLARASDTVPGITERFELFMTGREIANGFSELNDPEDQ 455

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 456 AARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 515

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 516 LFPHLRRE 523


>gi|237745577|ref|ZP_04576057.1| lysyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229376928|gb|EEO27019.1| lysyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 511

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 26/366 (7%)

Query: 2   HQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     +++  YR+R                R    +S+R +  EN F+E+++  
Sbjct: 157 RPLPDKFHGLSDQEIRYRQRYVDLIMNEETRRTFRARTAAIASIRRFMGENGFMEVETPM 216

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L   PG     + F T     + +   ++++ +PE   K+LL  G +++F     +RN  
Sbjct: 217 LHAIPGGAA-AKPFIT---YHNALDMQMFMRIAPELYLKRLLVGGFDRVFELNRNFRNEG 272

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPEY 167
               H PEFTM+E+Y A+  Y  LM     +IR    +     + ++Q    +       
Sbjct: 273 VSPRHNPEFTMMEFYAAYVDYRWLMDFTETVIRQAVIDTYGTPVITYQGRELDFSKPFHR 332

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +T+ EA A+YA              D   +  + ++ G+ +        +   +  E  E
Sbjct: 333 LTILEAIAKYA-----PHYTKEQLNDTGFMKAELKKFGVELLPTAGIGAMQLALFEETAE 387

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA      P  T+RFEL+    E+ N   EL DP +Q  R
Sbjct: 388 AK--LWEPTYIIDYPVEVSPLARASDTRPDITERFELFMVGREIANGFSELNDPEDQSAR 445

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F K+++ K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI  P
Sbjct: 446 FMKQVEAKDAGDEEAMYYDSDYIRALEYGMPPAGGCGIGIDRLVMLLTDSPNIRDVILFP 505

Query: 347 FSQSNQ 352
             +  +
Sbjct: 506 HMRREE 511


>gi|73956994|ref|XP_861471.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 6 [Canis familiaris]
 gi|73956996|ref|XP_861505.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 7 [Canis familiaris]
          Length = 441

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 54  LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 113

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 114 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKILVVGGIDRVYEIGRQFRNE 169

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +           
Sbjct: 170 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYHPDGPEGEAYEI 229

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 230 DFTPPFRRISMVEELEKALGVKLPETKLFETEETRKILDDICLARAVECPPPRTTARLLD 289

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 290 KLVGEFLETTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 347

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 348 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNN 407

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 408 IKEVLLFPAMKPEDKK 423


>gi|293380366|ref|ZP_06626437.1| lysyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|290923049|gb|EFD99980.1| lysyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 516

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 161/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y  +  F+E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEAIYRQRYLDLITNRDSYMRFVHRTQIIQAIRDYLNKQNFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GLDTHHNPEFTELESYAAYWDFHDVMDEAEGIIRAAAKVVSDDGKITYQGTDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A+   I V        I +    +  
Sbjct: 318 RVHMVDLIKEKTGVDFWKPMT------LEKATKIAEDHDIHVEKFWKVGHIINAFFEKYC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 372 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E++   +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEAQMEEREAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPERVE 498


>gi|90962323|ref|YP_536239.1| lysyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227891608|ref|ZP_04009413.1| lysyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|90821517|gb|ABE00156.1| Lysyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227866755|gb|EEJ74176.1| lysyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300214973|gb|ADJ79389.1| Lysyl-tRNA synthetase [Lactobacillus salivarius CECT 5713]
          Length = 495

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 162/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R              + R+ I +++R Y   N F+E+++ 
Sbjct: 142 LRPLPDKFHGLQNVEQIYRQRYLDLITNRESYNRFVNRSKIVTAVRNYLDSNGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 202 VLHNQAGGAA-ARPFITH---HNALDIQLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  ++ +M +   I + AA+V       ++Q  + +   E +
Sbjct: 258 GIDTKHNPEFTMLETYAAYFDFKDVMDETEGIFKAAAKVVTSDGKINYQGTDVDFNKEFK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A +  +          I +    +  
Sbjct: 318 RVHMVDLIKEKTGVDFWKEMS------LEEARKIADEHKVHYEPYWQVGHIINEFFEQFC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EDT--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFELFILGNEYANAFTELNDPIDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E++   +E   IDED++  +   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 430 RFEAQVAERQAGNDEAEGIDEDYIEAMEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 489

Query: 346 PFSQSN 351
           P  +  
Sbjct: 490 PTLRPE 495


>gi|170064641|ref|XP_001867610.1| lysyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167881959|gb|EDS45342.1| lysyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 585

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 82/373 (21%), Positives = 150/373 (40%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R                R  I S +R++     F+E+++ 
Sbjct: 199 LHMLPHLHYGLKDKETRFRQRYLDLILNNHVRDIFYVRAKIISYVRQFLDGMGFLEVETP 258

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K L   G ++++     +RN 
Sbjct: 259 MMNMIAGGAT-AKPFITH---HNDLNMNLFLRIAPELYLKMLTVGGLDRVYEIGRQFRNE 314

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  L++    ++    +  +       +           
Sbjct: 315 GIDLTHNPEFTTCEFYMAYADYNDLIEMTEKMVSGMVKSIHGSYKIKYHPEGPDGKEFEV 374

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++         +                L     +  +      T + +  
Sbjct: 375 DFTPPFKRVSMISTLEEILKVKFPAADKLNTPEANKFLSDLCTKHAVECPAPRTTARLLD 434

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E N      T +  +P   S LA  +      T+RFEL+    E+CNA  EL 
Sbjct: 435 KLVGEFLEENC--INPTFICDHPQIMSPLAKYHRNATGLTERFELFVMKKEVCNAYTELN 492

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP  QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T  NN
Sbjct: 493 DPAVQRERFEQQAADKAAGDDEAQLVDENFCTALEYGLPPTGGWGMGIDRLTMFLTDNNN 552

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 553 IKEVLLFPAMKPD 565


>gi|157960585|ref|YP_001500619.1| lysyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189082970|sp|A8H0J7|SYK_SHEPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157845585|gb|ABV86084.1| lysyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 501

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 86/367 (23%), Positives = 157/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + V+ +F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQETRYRQRYVDLIVNEDSREAFIMRSKVVSAIRNFMVKKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHSIPGGAS-ARPFETH---HNALDIAMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  +  LM     ++   A          +     +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADFNDLMDLTEEMLSSIATELCGSPQLPYGEHTVDFGGPYA 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y   +    ++   +  D   +   A+  G+ V    T   +   I  E 
Sbjct: 315 RLSMLDAIKKYNPDNATIQSMTYEEVKDVEFMRDLAKSLGMTVEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AETQ--LMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 SRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|227509315|ref|ZP_03939364.1| lysyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227191245|gb|EEI71312.1| lysyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 501

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 166/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR+ I +++R Y   + ++E+++ 
Sbjct: 142 LRPLPDKWHGLQDQEQKYRQRYLDLISNQDSFDRFHKRSHIITAIRNYLDSHDYLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 202 VLHNQAGGA-NARPFITH---HNALNIDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M +   I + AA+      + ++Q    +     +
Sbjct: 258 GMDTRHNPEFTMLESYVAYYDFHDVMDETEGIFKAAAKTVTDDGMITYQGHTIDLDKPFK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +A   Y  ID    +      D       A +  I          I +    E +
Sbjct: 318 RQHMVDAIKEYTGIDFWKPM------DDDAAKKLADEHHIHYEPWWKTGHIINAFFEELV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P   +   T +  +P   S LA     DPRFT RFELY    E  NA  EL DPI+QR 
Sbjct: 372 QPK--LEQPTFIYGHPVEISPLAKKNAEDPRFTDRFELYILTNEFANAFTELNDPIDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E   IDED++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 430 RFEAQVKERQEGNDEAEGIDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 489

Query: 346 PFSQSN 351
           P  +  
Sbjct: 490 PTMRPE 495


>gi|227537220|ref|ZP_03967269.1| lysine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242935|gb|EEI92950.1| lysine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 572

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 96/355 (27%), Positives = 161/355 (45%), Gaps = 26/355 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +F YR+R              +K + +++++R++  E   +E+D+  LQ  PG     
Sbjct: 161 DPEFRYRQRYVDLVVNPQVRDTFVKVSKVKTAIRDFLNEQGALEVDTPVLQSIPGGAA-A 219

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F T     + +  PLYL+ + E   K+L+  G + ++ F+  +RN      H PEFT+
Sbjct: 220 RPFITH---HNALDIPLYLRIANELYLKRLIVGGFDWVYEFSRNFRNEGMDRTHNPEFTV 276

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP-EYITVAEAFARYA 178
           LE+Y A++ Y  +M+    ++   A   N         N   F+ P + I++ ++   Y 
Sbjct: 277 LEFYVAYKDYVWMMETTEKLLEKVALATNGTTSVQVGENQINFAPPYKRISIYDSIKEYT 336

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D+          D   L    +Q  I          +   I  EK E N      T +
Sbjct: 337 GFDVSEM-------DEVGLREVCKQLHIPTTEAMGKGKLIDEIFGEKCEGNY--IQPTFI 387

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L   +       +RFEL     E+ NA  EL DPI+Q  RFE +++  ++ 
Sbjct: 388 TDYPKEMSPLTKKHREKAGLVERFELMVNGKEVANAYSELNDPIDQLERFEDQLKLMERG 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +E   ID DF+  L   MP ++GI +G DRL ML+T   +I +V++ P  +  +
Sbjct: 448 DDEAMFIDYDFVRSLEYGMPPTAGIGIGIDRLAMLMTNQASIQDVLFFPQMRPEK 502


>gi|315925854|ref|ZP_07922060.1| lysine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315620818|gb|EFV00793.1| lysine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 491

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR R              + R+ I + +R +     F+E+++ 
Sbjct: 136 LQVLPEKYHGLKDTDIRYRERYVDLIVNPEVRDVFVIRSKIITEIRRFLDGRGFLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +  P+YL+ + E   K+L+  G +K++  +  +RN 
Sbjct: 196 VLNNLAGGA-NARPFVTH---HNTLDIPMYLRIALELPLKRLIVGGFDKVYELSRVFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  Y  +M    ++    A+ +      ++     +      
Sbjct: 252 GMDPTHNPEFTELETYEAYADYVDVMNMVEDLYHHLADKILGTTDVAYDGQVIHLGEPFR 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +       +D           D       A+   + VA  DT  +I +++  E  
Sbjct: 312 RARMVDIVKEVTGVDFDGM------TDPAEAKAAAEGLEVDVADLDTVGEIMAKVFDETC 365

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   PADPR+T+RFELY    E  NA  EL DP +Q+ 
Sbjct: 366 EDQ--LIQPTFVTMHPVETSPLAKKDPADPRYTQRFELYIDGAECANAFSELNDPADQKA 423

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M  K    +E +P D DF+  L   +P + G+ +G DRLVML TG  +I +VI  
Sbjct: 424 RFEAQMARKADGDDEAHPYDADFIKALEVGLPPTGGLGIGIDRLVMLFTGQRSIRDVILF 483

Query: 346 PFSQS 350
           P  + 
Sbjct: 484 PTMKP 488


>gi|260102344|ref|ZP_05752581.1| lysine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083853|gb|EEW67973.1| lysine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 516

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 162/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y  +  F+E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEAIYRQRYLDLITNRDSYMRFVHRTQIIQAIRDYLNKQNFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GLDTHHNPEFTELESYAAYWDFHDVMDEAEGIIRAAAKVVSDDGKITYQGQDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +       +D    +   +          A+   I V        I +    +  
Sbjct: 318 RIHMVDLIKEKTGVDFWKPMTLEEAT------KIAEDHDIHVEKFWKVGHIINAFFEKYC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 372 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E++   +E   +DED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEAQMEEREAGNDEADMVDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPERAE 498


>gi|57491377|gb|AAW51378.1| GekBS062P [Gekko japonicus]
          Length = 597

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 156/376 (41%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +     F+EI++ 
Sbjct: 210 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDALGFLEIETP 269

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     +   T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 270 MMNIIPGGAV-AKPSIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 325

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 326 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYEI 385

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 386 DFTPPFRKISMVEELEKALGMKLPDTNLFETEETRKILDDICVAKAVECPPPRTTARLLD 445

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 446 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 503

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE F   L   +P + G  MG DR+ M +T +NN
Sbjct: 504 DPVRQRQLFEEQAKAKAAGDDEAMFIDETFCTALEYGLPPTGGWGMGIDRVTMFLTDSNN 563

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 564 IKEVLLFPAMKPEDKK 579


>gi|19703801|ref|NP_603363.1| lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|39932224|sp|Q8RG52|SYK_FUSNN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|19713947|gb|AAL94662.1| Lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 493

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 155/366 (42%), Gaps = 28/366 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R              +KR  I  ++R+Y  +  F+E+++  
Sbjct: 139 RSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRETFIKRTKIIKAIRKYLDDRGFLEVETPI 198

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     + F T     + +   L+L+ +PE   KKL+  G E+++     +RN  
Sbjct: 199 MHPILGGAA-AKPFITH---HNTLNIDLFLRIAPELYLKKLIVGGFERVYDLNRNFRNEG 254

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y+AH  +  +M  C  II    +  N       +           +
Sbjct: 255 ISTRHNPEFTMVELYQAHADFNDMMDLCEGIISSVCQEINGTTDIEYDGVQLSLKNFNRV 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIE 227
            + +       +D    +              A++  + VA        I +    +K E
Sbjct: 315 HMVDMIKEVTGVDFWKEMT------FEEAKKLAKEHHVEVADHMNSVGHIINEFFEQKCE 368

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P FT RFEL+    E  NA  EL DP +QR R
Sbjct: 369 EK--VIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKREYANAFTELNDPADQRGR 426

Query: 288 FEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE +++E  +   E  P IDE F+  L   +P + G+ +G DRLVML+TGA +I +VI  
Sbjct: 427 FEAQVEEAMRGNEEATPEIDESFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PQMKPR 492


>gi|282933691|ref|ZP_06339049.1| lysine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|281302181|gb|EFA94425.1| lysine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 507

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 141 LRPLPDKYHGLQNVEQIYRQRYLDLMTNHDSYMRFVHRTKIIQAIRDYLNNRDFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 201 VLHNIPGGA-EARPFITH---HNALDIDLYLRIALELPLKRLIVGGMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   II+ AA+V       ++Q    +      
Sbjct: 257 GVDTRHNPEFTELETYCAYWDFHDVMDEAEGIIKAAAKVVTDDGKVNYQGTEIDLGKPFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A++ GI V        I +    E  
Sbjct: 317 RVHMVDLIKEQTGVDFWKPMT------LDEAKKVAEEHGIHVEPFWKVGHIINAFFEEFG 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  I   T +  +P   S LA     DPRFT RFE++   +E  NA  EL DPI+QR 
Sbjct: 371 EKS--IVNPTFVYGHPVEISPLAKKNADDPRFTDRFEIFIMGMEYGNAFSELNDPIDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDEDF+  L   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 429 RFEAQMAERDAGNDEADVIDEDFVRALEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 488

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 489 PTMRPER 495


>gi|116493270|ref|YP_805005.1| lysyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265266|sp|Q03E09|SYK_PEDPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116103420|gb|ABJ68563.1| Lysyl-tRNA synthetase (class II) [Pediococcus pentosaceus ATCC
           25745]
          Length = 498

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 164/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R               KR  I S++R Y   N F E+++ 
Sbjct: 144 LRPLPDKFHGLQNVEQIYRQRYLDLIANDDSMDRFRKRTKIVSAVRRYLDGNDFAEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHTQAGGAS-ARPFITH---HNALDINLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M +   I + A    +     ++Q    +   + E
Sbjct: 260 GIDTRHNPEFTMLETYAAYFDFHDVMDETEGIFKAAVAAVSDDGKITYQGTELDLGQDFE 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  +YA +D    +   D          A + GI      T   I +    EK+
Sbjct: 320 RLHMVDAIKKYAGVDFWPKMSVED------AKKLADENGIHYESWWTVGHIINEFFEEKV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +    +     +  +P   S LA     D RFT RFELY    E  NA  EL DPI+QR 
Sbjct: 374 QDQ--LKQPVFIYGHPVEISPLAKKNAEDDRFTDRFELYILGNEYGNAFTELNDPIDQRA 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E++   +E   IDED++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 432 RFEAQVAEREAGNDEAEGIDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 491

Query: 346 PFSQS 350
           P  + 
Sbjct: 492 PTMKP 496


>gi|325568182|ref|ZP_08144623.1| lysine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325158383|gb|EGC70534.1| lysine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 516

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 103/364 (28%), Positives = 164/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   + +IE+++ 
Sbjct: 165 LRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGHGYIEVETP 224

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 225 VLHNQAGGAA-ARPFITH---HNALDMDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 280

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  ++ +M     IIR AA +V +     +     +  S+  
Sbjct: 281 GIDTTHNPEFTMLEAYTAYTDFKDVMDLTEGIIRNAAEKVLHTATIQYDGQEVDLASDFA 340

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +              A++  + +    T   I +      +
Sbjct: 341 RIHMVDAIKNQTGVDFWQPMSV------EEARSLAKEHHVEITDAMTVGHIINEFFETFV 394

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 395 EET--LQQPTFVFGHPVEVSPLAKKNPEDERFTDRFELFIVGREFANAFTELNDPIDQRE 452

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +E++   +E + +DEDFL  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 453 RFEGQEKEREAGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 512

Query: 346 PFSQ 349
           P  +
Sbjct: 513 PTMR 516


>gi|327383534|gb|AEA55010.1| Lysyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386727|gb|AEA58201.1| Lysyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 499

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR  I S++REY   N F+E+++ 
Sbjct: 147 LRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVREYLDNNGFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 207 VLHNQAGGA-NARPFVTH---HNALDIDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+     +M +   I R AA         ++Q +  +  +   
Sbjct: 263 GIDTKHNPEFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPFA 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +   D          A +  +          I S    + +
Sbjct: 323 RINMLDAIKDKTGVDFWPEMSVDD------ARKLADEHDVHYEPYWKVGHIISAFFDQFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRF +RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EET--LIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGGEYANAFTELNDPIDQRQ 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  EK    +E   ID+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEAQAAEKSAGNDEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 494

Query: 346 PFSQS 350
           P  + 
Sbjct: 495 PTLRP 499


>gi|312978417|ref|ZP_07790159.1| lysine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310894760|gb|EFQ43832.1| lysine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 511

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 161/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 137 LRPLPDKYHGLKDVEAIYRQRYLDLITNHDSYMRFVHRTQIIQAIRDYLNSQNFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 197 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  Y  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 253 GLDTHHNPEFTELESYAAYWDYHDVMDEAEGIIRAAAKVVSDDGKITYQGTDIDLGKPFR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +   +          A+   I V        I +    +  
Sbjct: 313 RVHMVDLIKEKTGVDFWKPMTLEEAT------KIAEDHDIHVEKFWKVGHIINAFFEKYC 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 367 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E++   +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 425 RFEAQMEEREAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 484

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 485 PTMRPERVE 493


>gi|300312097|ref|YP_003776189.1| lysyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300074882|gb|ADJ64281.1| lysyl-tRNA synthetase (Class II) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 513

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 150/368 (40%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    SS+R +   + F+E+++ 
Sbjct: 154 LRPLPDKFHGLADQEMKYRQRYVDLIMSEETRRTFKARTAAMSSIRRFMETHGFMEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++++ +PE   K+L+  G E++F     +RN 
Sbjct: 214 MLHPIPGGAA-AKPFITH---HNALDMQMFMRIAPELYLKRLVVGGFERVFEINRNFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     +IR AA +     + S+Q    +     +
Sbjct: 270 GVSPRHNPEFTMMEFYAAYVDYQWLMGFTEQVIRQAAIDAHGTAVLSYQGRELDLSKPFD 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+  A  +YA              D   L  + ++ G++             + +   
Sbjct: 330 RLTITGAILKYA-----PNYTEAQLADIDFLRTELKKFGVKTDQAPLAGAGIGALQLALF 384

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL D  +Q
Sbjct: 385 EETAESQLWNPTYIIDYPVEVSPLARASDTVAGITERFELFITGREIANGFSELNDAEDQ 444

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  ++  K     E    D D++  L   MP + G  +G DRL+ML+T + NI +VI
Sbjct: 445 AARFHAQVAAKDAGDEEAMYYDADYIRALEYGMPPAGGCGIGIDRLMMLITDSPNIRDVI 504

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 505 LFPHLRRE 512


>gi|256852019|ref|ZP_05557406.1| lysyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661412|ref|ZP_05862325.1| lysyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|256615431|gb|EEU20621.1| lysyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547867|gb|EEX23844.1| lysyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
          Length = 514

 Score =  328 bits (842), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 148 LRPLPDKYHGLQNVEQIYRQRYLDLMTNHDSYMRFVHRTKIIQAIRDYLNNRDFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 208 VLHNIPGGA-EARPFITH---HNALDIDLYLRIALELPLKRLIVGGMERVYEIGRVFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   II+ AA+V       ++Q    +      
Sbjct: 264 GVDTRHNPEFTELETYCAYWDFHDVMDEAEGIIKAAAKVVTDDGKVNYQGTEIDLGKPFR 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A++ GI V        I +    E  
Sbjct: 324 RVHMVDLIKEQTGVDFWKPMT------LDEAKKVAEEHGIHVEPFWKVGHIINAFFEEFG 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  I   T +  +P   S LA     DPRFT RFE++   +E  NA  EL DPI+QR 
Sbjct: 378 EKS--IVNPTFVYGHPVEISPLAKKNADDPRFTDRFEIFIMGMEYGNAFSELNDPIDQRE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDEDF+  L   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 436 RFEAQMAERDAGNDEADVIDEDFVRALEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 495

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 496 PTMRPER 502


>gi|313884406|ref|ZP_07818167.1| lysine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620190|gb|EFR31618.1| lysine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 504

 Score =  328 bits (842), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 161/366 (43%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              + R+MI   +R Y  +  ++E+++ 
Sbjct: 150 LRPLPDKFHGLTNVEQRYRQRYLDLISNDDSRQRFINRSMIIRQIRRYLDDLGYLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  + F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 210 VLHNIAGGAT-AKPFITH---HNALDMELYLRIATELHLKRLVVGGFEKVYELGRVFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y   M    N+IR  A+    Q +  +     +  +   
Sbjct: 266 GIDTTHNPEFTTIEIYTAYSVYTDCMDLVENLIRTVAKEAIGQTVIDYAGQKIDLETPWA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEK 225
              + +    Y  +D    +              A++  + +  HD+T   + +    E 
Sbjct: 326 RRHMVDMIKEYTGVDFWQEMT------FEEAKALAKEHHVPLNDHDNTVGHVINNFFEEY 379

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E        T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR
Sbjct: 380 CEDKC--IQPTFVYGHPVEVSPLARKNDEDPRFTDRFELFIVGNEYANAFTELTDPIDQR 437

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +M EK    +E +P+D+DFL  L   MP + GI +G DRL ML+T A +I +V+ 
Sbjct: 438 ERFEAQMAEKDAGNDEAHPVDDDFLEALEYGMPPTGGIGIGVDRLAMLLTDAQSIRDVLL 497

Query: 345 TPFSQS 350
            P  ++
Sbjct: 498 FPTLRN 503


>gi|191639442|ref|YP_001988608.1| Lysyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|239630366|ref|ZP_04673397.1| lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|190713744|emb|CAQ67750.1| Lysyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|239526649|gb|EEQ65650.1| lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 498

 Score =  328 bits (842), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR  I S++REY   N F+E+++ 
Sbjct: 146 LRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVREYLDNNGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 206 VLHNQAGGA-NARPFVTH---HNALDIDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+     +M +   I R AA         ++Q +  +  +   
Sbjct: 262 GIDTKHNPEFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPFA 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +   D          A +  +          I S    + +
Sbjct: 322 RINMLDAIKDKTGVDFWPEMSVDD------ARKLADEHDVHYEPYWKVGHIISAFFDQFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRF +RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EET--LIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGGEYANAFTELNDPIDQRQ 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  EK    +E   ID+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEAQAAEKSAGNDEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 493

Query: 346 PFSQS 350
           P  + 
Sbjct: 494 PTLRP 498


>gi|323465812|gb|ADX69499.1| Lysyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 516

 Score =  328 bits (842), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 162/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y  +  F+E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEAIYRQRYLDLITNRDSYMRFVHRTQIIQAIRDYLNKQNFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GLDTHHNPEFTELESYAAYWDFHDVMDEAEGIIRAAAKVVSDDGKITYQGQDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +       +D    +   +          A+   I V        I +    +  
Sbjct: 318 RIHMVDLIKEKTGVDFWKPMTLEEAT------KIAEDHDIHVEKFWKVGHIINAFFEKYC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 372 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E++   +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEAQMEEREAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPERVE 498


>gi|300772950|ref|ZP_07082819.1| lysine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300759121|gb|EFK55948.1| lysine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 572

 Score =  328 bits (842), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 96/355 (27%), Positives = 161/355 (45%), Gaps = 26/355 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +F YR+R              +K + +++++R++  E   +E+D+  LQ  PG     
Sbjct: 161 DPEFRYRQRYVDLVVNPQVRDTFVKVSKVKTAIRDFLNEQGALEVDTPVLQSIPGGAA-A 219

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F T     + +  PLYL+ + E   K+L+  G + ++ F+  +RN      H PEFT+
Sbjct: 220 RPFITH---HNALDIPLYLRIANELYLKRLIVGGFDWVYEFSRNFRNEGMDRTHNPEFTV 276

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP-EYITVAEAFARYA 178
           LE+Y A++ Y  +M+    ++   A   N         N   F+ P + I++ ++   Y 
Sbjct: 277 LEFYVAYKDYVWMMETTEKLLEKVALATNGTTSVQVGENQINFAPPYKRISIYDSIKEYT 336

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D+          D   L    +Q  I          +   I  EK E N      T +
Sbjct: 337 GFDVSEM-------DEVGLREVCKQLHIPTTEAMGKGKLIDEIFGEKCEGNY--IQPTFI 387

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L   +       +RFEL     E+ NA  EL DPI+Q  RFE +++  ++ 
Sbjct: 388 TDYPKEMSPLTKKHREKAGLVERFELMVNGKEVANAYSELNDPIDQLERFEDQLKLMERG 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +E   ID DF+  L   MP ++GI +G DRL ML+T   +I +V++ P  +  +
Sbjct: 448 DDEAMFIDYDFVRSLEYGMPPTAGIGIGIDRLAMLMTNQASIQDVLFFPQMRPEK 502


>gi|238855046|ref|ZP_04645374.1| lysine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|282934832|ref|ZP_06340066.1| lysine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472616|ref|ZP_07813105.1| lysine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832290|gb|EEQ24599.1| lysine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529433|gb|EEQ68434.1| lysine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|281301104|gb|EFA93414.1| lysine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 507

 Score =  328 bits (842), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 141 LRPLPDKYHGLQNVEQIYRQRYLDLMTNHESYMRFVHRTKIIQAIRDYLNNRDFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 201 VLHNIPGGA-EARPFITH---HNALDIDLYLRIALELPLKRLIVGGMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   II+ AA+V       ++Q    +      
Sbjct: 257 GVDTRHNPEFTELETYCAYWDFHDVMDEAEGIIKAAAKVVTDDGKVNYQGTEIDLGKPFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A++ GI V        I +    E  
Sbjct: 317 RVHMVDLIKEQTGVDFWKPMT------LDEAKKVAEEHGIHVEPFWKVGHIINAFFEEFG 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  I   T +  +P   S LA     DPRFT RFE++   +E  NA  EL DPI+QR 
Sbjct: 371 EKS--IVNPTFVYGHPVEISPLAKKNADDPRFTDRFEIFIMGMEYGNAFSELNDPIDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDEDF+  L   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 429 RFEAQMAERDAGNDEADVIDEDFVRALEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 488

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 489 PTMRPER 495


>gi|156542803|ref|XP_001607568.1| PREDICTED: similar to lysyl-tRNA synthetase [Nasonia vitripennis]
          Length = 585

 Score =  328 bits (842), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 85/373 (22%), Positives = 159/373 (42%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R                R  I S LR++  +  F+EI++ 
Sbjct: 197 LHMLPHLHFGLKDKETRFRQRYLDLIINDKVRQKFYVRAKIISYLRKFLDDLGFLEIETP 256

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 257 MMNMIAGGAT-AKPFVTH---HNDLNMDLYMRIAPELYHKMLVVGGIDRVYEVGRQFRNE 312

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--------NC 159
                H PEFT  E+Y A+  Y  LM     ++    +  +       +           
Sbjct: 313 GIDMTHNPEFTTCEFYMAYADYNDLMSITEELVSGMVKTIHGTYKIKYHPDGEGGEEVEI 372

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +      N+      +         L     +  +      T + +  
Sbjct: 373 DFTPPFKRVSMVKTLEELLNVKFPKPTEFNTPETNKFLIDLCAKHEVECPAPKTTARLLD 432

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ + IE        T +  +P   S LA  + ++   T+RFEL+    E+CNA  EL 
Sbjct: 433 KLVGDFIEEKC--INPTFIMDHPQIMSPLAKWHRSEAGLTERFELFVMKKEICNAYTELN 490

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP  QR RFE++ ++K    +E   IDE+F   L   +P ++G  +G DRL M +T +NN
Sbjct: 491 DPFVQRERFEQQAKDKAAGDDEAQLIDENFCTALEYGLPPTAGWGIGIDRLTMFLTDSNN 550

Query: 339 INEVIWTPFSQSN 351
           I EV++ P  + +
Sbjct: 551 IKEVLFFPAMKPD 563


>gi|260664830|ref|ZP_05865681.1| lysyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|260561313|gb|EEX27286.1| lysyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
          Length = 514

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 148 LRPLPDKYHGLQNVEQIYRQRYLDLMTNHESYMRFVHRTKIIQAIRDYLNNRDFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 208 VLHNIPGGA-EARPFITH---HNALDIDLYLRIALELPLKRLIVGGMERVYEIGRVFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   II+ AA+V       ++Q    +      
Sbjct: 264 GVDTRHNPEFTELETYCAYWDFHDVMDEAEGIIKAAAKVVTDDGKVNYQGTEIDLGKPFR 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A++ GI V        I +    E  
Sbjct: 324 RVHMVDLIKEQTGVDFWKPMT------LDEAKKVAEEHGIHVEPFWKVGHIINAFFEEFG 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  I   T +  +P   S LA     DPRFT RFE++   +E  NA  EL DPI+QR 
Sbjct: 378 EKS--IVNPTFVYGHPVEISPLAKKNADDPRFTDRFEIFIMGMEYGNAFSELNDPIDQRE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDEDF+  L   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 436 RFEAQMAERDAGNDEADVIDEDFVRALEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 495

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 496 PTMRPER 502


>gi|227533061|ref|ZP_03963110.1| Lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227189312|gb|EEI69379.1| Lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 508

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR  I S++REY   N F+E+++ 
Sbjct: 156 LRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVREYLDNNGFLEVETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 216 VLHNQAGGA-NARPFVTH---HNALDIDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+     +M +   I R AA         ++Q +  +  +   
Sbjct: 272 GIDTKHNPEFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPFA 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +   D          A +  +          I S    + +
Sbjct: 332 RINMLDAIKDKTGVDFWPEMSVDD------ARKLADEHDVHYEPYWKVGHIISAFFDQFV 385

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRF +RFEL+    E  NA  EL DPI+QR 
Sbjct: 386 EET--LIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGGEYANAFTELNDPIDQRQ 443

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  EK    +E   ID+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 444 RFEAQAAEKSAGNDEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 503

Query: 346 PFSQS 350
           P  + 
Sbjct: 504 PTLRP 508


>gi|194289271|ref|YP_002005178.1| lysyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|254782472|sp|B3R478|SYK_CUPTR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193223106|emb|CAQ69111.1| lysine tRNA synthetase, constitutive [Cupriavidus taiwanensis LMG
           19424]
          Length = 517

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 156/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    SSLR +  +  F+E+++ 
Sbjct: 158 LRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTDAISSLRRHMADAGFMEVETP 217

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 218 MLHPIPGGAA-AKPFITH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 273

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    ++IR AA  A    + ++Q+   +      
Sbjct: 274 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEDLIRKAAIDARGSAVLTYQDRELDLSKPFH 333

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  ++A         +    D   L  + ++ G+        +     + +   
Sbjct: 334 RLTICQAIQKFA-----PQYTDAQLADAEFLRTELKKFGVNTNAPQFLNAGLGTLQLVLF 388

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL D  +Q
Sbjct: 389 EETAESQLWEPTFIVDYPVEVSPLARASDTVPGITERFELFITGREIANGFSELNDAEDQ 448

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI
Sbjct: 449 ADRFRKQVEQKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVI 508

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 509 LFPHLRKE 516


>gi|257868308|ref|ZP_05647961.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257874419|ref|ZP_05654072.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257877913|ref|ZP_05657566.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257802422|gb|EEV31294.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257808583|gb|EEV37405.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257812079|gb|EEV40899.1| lysyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 497

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 103/364 (28%), Positives = 165/364 (45%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   + +IE+++ 
Sbjct: 146 LRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGHGYIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 206 VLHNQAGGAA-ARPFITH---HNALDMDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  ++ +M     IIR AA +V +     +     +  S+  
Sbjct: 262 GIDTTHNPEFTMLEAYTAYTDFKDVMDLTEGIIRNAAEKVLHTATIQYDGQEVDLASDFA 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +   +          A++  + +    T   I +      +
Sbjct: 322 RIHMVDAIKNQTGVDFWQPMSVEE------ARSLAKEHHVEITDAMTVGHIINEFFETFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EET--LQQPTFVFGHPVEVSPLAKKNPEDERFTDRFELFIVGREFANAFTELNDPIDQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +E++   +E + +DEDFL  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEGQEKEREAGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 493

Query: 346 PFSQ 349
           P  +
Sbjct: 494 PTMR 497


>gi|210610360|ref|ZP_03288365.1| hypothetical protein CLONEX_00555 [Clostridium nexile DSM 1787]
 gi|210152510|gb|EEA83516.1| hypothetical protein CLONEX_00555 [Clostridium nexile DSM 1787]
          Length = 496

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I +S+R Y     F+E+++ 
Sbjct: 141 LQILPEKFHGLTNTDLRYRQRYVDLIMNPDVKDTFVKRSKILASIRRYLDGQGFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + L L+ S E   K+L+  G E+++     +RN 
Sbjct: 201 MLVANAGGAA-ARPFETHF---NALNEDLKLRISLELYLKRLIVGGLERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A+ V      ++  V  +     E
Sbjct: 257 GLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRYVAQEVLGTTTITYNGVEMDLGKPFE 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA +D                   A++  +         DI +    E  
Sbjct: 317 RITMVDAVKKYAGVDFDEIHT------LEEARAAAKEHHVEFEERHKKGDILALFFEEFA 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFE +    E+ NA  EL DPI+QR 
Sbjct: 371 EEH--LIQPTFVMDHPIEISPLTKKKPENPEYTERFEFFMNGWEMANAYSELNDPIDQRE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +   +   E    DEDFL  L   MP + GI  G DR+ ML+T +  I +V+  
Sbjct: 429 RFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLLTDSAAIRDVLLF 488

Query: 346 PFSQS 350
           P  +S
Sbjct: 489 PTMKS 493


>gi|161506863|ref|YP_001576817.1| lysyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160347852|gb|ABX26526.1| Lysyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 511

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 162/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y  +  F+E+++ 
Sbjct: 137 LRPLPDKYHGLKDVEAIYRQRYLDLITNRDSYMRFVHRTQIIQAIRDYLNKQNFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 197 VLHNIPGGA-EARPFITH---HNALDIELYMRIALELPLKRLIVGDMERVYEIGRVFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 253 GLDTHHNPEFTELESYAAYWDFHDVMDEAEGIIRAAAKVVSDDGKITYQGQDIDLGKPFR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +       +D    +   +          A+   I V        I +    +  
Sbjct: 313 RIHMVDLIKEKTGVDFWKPMTLEEAT------KIAEDHDIHVEKFWKVGHIINAFFEKYC 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 367 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRA 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E++   +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 425 RFEAQMEEREAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 484

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 485 PTMRPERAE 493


>gi|221134750|ref|ZP_03561053.1| lysyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 522

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 91/378 (24%), Positives = 160/378 (42%), Gaps = 35/378 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              L R+ I + +R +  +  F+E+++ 
Sbjct: 139 LRPLPEKFHGLADQETKYRQRYVDLITSPETRATFLLRSKIVNGIRSFLADRDFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MLQVIPGGAT-AKPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN----------- 156
                H PEFTM+E+Y+A+  Y  LM    ++++  A+                      
Sbjct: 255 GLSTRHNPEFTMIEFYQAYADYNDLMDLTEDMLKHLAQNVLGTTIVKNTVKNADGEVVET 314

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDT 213
              +     + +++ +A  +Y        +++P+      L   A+Q  I+         
Sbjct: 315 KEYDFGQPFQRLSMGDAILKYWPEANAAAINDPE-AHLDELKAMAKQLHIKEPEVDGIWG 373

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
                  I     E    ++  T +  YP   S LA     +   T RFE +    EL N
Sbjct: 374 AGKYLCEIFEATAEEQ--LDQPTFITEYPWEVSPLARRNDDNHFITDRFEFFVGGRELAN 431

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              EL D  +Q  RF+K+++EK    +E    DED++  L   MP ++G  +G DRLVML
Sbjct: 432 GFSELNDSEDQAARFKKQVEEKDAGDDEAMHFDEDYITALEYGMPPTAGEGIGIDRLVML 491

Query: 333 VTGANNINEVIWTPFSQS 350
            + +  I +VI  P  + 
Sbjct: 492 FSDSPTIKDVILFPHMKP 509


>gi|291613966|ref|YP_003524123.1| lysyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291584078|gb|ADE11736.1| lysyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 500

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 157/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R  I  ++RE+FV + ++E+++ 
Sbjct: 146 LRPLPEKFHGLTDMEQKYRQRYLDLITNEQSRKVFIARTQIIQAIREFFVRHGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  + F T     + +   +YL+ +PE   K+L+  G EK+F     +RN 
Sbjct: 206 MMHPIPGGAS-AKPFVTH---HNALDLQMYLRIAPELYLKRLVVGGFEKVFEVNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     +    A       + ++Q    +      
Sbjct: 262 GVSTRHNPEFTMIEFYEAYRDYKYLMDFSEKLFAEVARKVLGTTVITYQGKELDLGKPFH 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y          +    DR  L  + +    +    D    +   +  E  
Sbjct: 322 RLTMVQAIQKY-----HPQFTDAQLNDRDFLVNELKDLKAKYNPKDAVGGLQLSLFEELA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA    A P  T+RFEL+    E+ N   EL D  +Q  
Sbjct: 377 EAH--LFEPTFIIDYPVEVSPLARSSDARPEITERFELFIVGREIANGFSELNDAEDQER 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K     E    D D++  L   +P ++G  +G DRLVML+T + +I +VI  
Sbjct: 435 RFDAQVAAKDAGDEEAMFKDNDYVRALEYGLPPTAGEGIGIDRLVMLLTDSASIRDVILF 494

Query: 346 PFSQSN 351
           P  +  
Sbjct: 495 PHMRPE 500


>gi|224418996|ref|ZP_03657002.1| lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827942|ref|ZP_04870827.1| Lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313142508|ref|ZP_07804701.1| lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511348|gb|EES90007.1| Lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131539|gb|EFR49156.1| lysyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 497

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 161/368 (43%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              + R+ I S +R++F EN F+E+++ 
Sbjct: 142 ISPLPEKYHGLVDIEMRYRQRYLDLIMNREVRDTFVLRSKIISYVRKFFEENGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG   + + F T     + +    YL+ +PE   K+L+  G E +F     +RN 
Sbjct: 202 MMHPIPGGA-NAKPFVT---FHNALNVERYLRIAPELYLKRLVVGGFEAVFEINRNFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E+Y A++ Y+ L++    +     +V         N     FSE   
Sbjct: 258 GMDHSHNPEFTMIEFYWAYKDYKDLIRLTKALFDYLFKVLKLPKTLQFNEKEIDFSEFRE 317

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           IT  ++      I     +      +   LY       +++        + S      +E
Sbjct: 318 ITYVDSLVEIGGIPRDVAI------NEDRLYEYLVSHNVKLESKMELGKLQSEAFDAFVE 371

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P    RFEL+    E+ N   EL DP++Q  R
Sbjct: 372 DK--LINPTFITDFPIAISPLARRNDHNPEIADRFELFIGGSEIANGFSELNDPLDQYER 429

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+ ++  K+    E   +DED++  L   MP ++G  +G DRLVML+TG N I +VI  P
Sbjct: 430 FKAQVAAKEAGDEEAQYMDEDYITALSYGMPPTAGEGIGIDRLVMLLTGHNIIKDVILFP 489

Query: 347 FSQSNQEE 354
             +  +++
Sbjct: 490 ALKPQKKD 497


>gi|73956992|ref|XP_861443.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 5 [Canis familiaris]
          Length = 437

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 50  LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 109

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 110 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKILVVGGIDRVYEIGRQFRNE 165

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +           
Sbjct: 166 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYHPDGPEGEAYEI 225

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 226 DFTPPFRRISMVEELEKALGVKLPETKLFETEETRKILDDICLARAVECPPPRTTARLLD 285

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 286 KLVGEFLETTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 343

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 344 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNN 403

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 404 IKEVLLFPAMKPEDKK 419


>gi|330752807|emb|CBL88326.1| lysyl-tRNA synthetase [uncultured Dokdonia sp.]
          Length = 564

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 167/379 (44%), Gaps = 37/379 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  + +++R +F + 
Sbjct: 136 LKPLPQPRTDDEGKVHDAFTDPEMRYRQRYVDLTVNPHVKEVFVKRTKLFNAMRNFFNDA 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            + E+++  LQ   G     R F T     + +  PLY++ + E   K+L+  G E ++ 
Sbjct: 196 GYFEVETPVLQPIAGGAA-ARPFITH---HNSLDIPLYMRIANELYLKRLIVGGFEGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M  C  ++   A         +F    
Sbjct: 252 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFCEQLLETCAIAVNGTTEATFGEHE 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    +T+A++   +   D+              +   A+  GI V        + 
Sbjct: 312 VDFKAPYARVTMADSIKHFTGFDING-------KTEDEIRAAAEGMGIEVDDTMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGEKCEGNY--IQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPI+QR RFE +++  K+  +E    ID DFL  L   MP +SG+ +G DRL+M +T  
Sbjct: 423 NDPIDQRERFEAQLELAKRGDDEATASIDYDFLRSLEYGMPPTSGMGIGMDRLIMFLTNN 482

Query: 337 NNINEVIWTPFSQSNQEEI 355
            +I EV++ P  +  ++ +
Sbjct: 483 QSIQEVLFFPQMKPEKKAL 501


>gi|94987469|ref|YP_595402.1| lysyl-tRNA synthetase (class II) [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731718|emb|CAJ55081.1| Lysyl-tRNA synthetase (class II) [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 457

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 166/365 (45%), Gaps = 24/365 (6%)

Query: 2   HQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +       +  YR+R               KR+ I   +R +  EN FIE+++  
Sbjct: 103 RSLPEKHNGLTNIELRYRQRYIDLIVNPKTRDIFRKRSKIIHEIRAFLEENGFIEVETPI 162

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ  PG     R F+T     + +   LY++ +PE   K+LL  G EK+F    ++RN  
Sbjct: 163 LQPIPGGAM-ARPFTTH---NNAMDMTLYMRIAPELYLKRLLVGGFEKLFELNRSFRNEG 218

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM E+Y A+ +Y  LM+    +     +     +      N   F+     
Sbjct: 219 ISIQHNPEFTMCEFYWAYATYLDLMELTEEMFAYLTKKICGTMTISYQGNTIDFTP---- 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              + +  + +++           +   +    ++ G +V   D    + +++    +E 
Sbjct: 275 GTWQKYTFHESLEKIGGHSPEFYNNFEKVSEYIKEHGEKVLTTDKIGKLQAKLFDLDVEN 334

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP   S L+     +P  T RFEL+    E+ NA  EL DPI+QR RF
Sbjct: 335 K--LIQPTFIYHYPTDISPLSKKNKDNPEVTDRFELFIAGKEIANAFSELNDPIDQRLRF 392

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E+++ EK +   E  P+DED+L  L   MP ++G  +G DRLVML+T + +I EVI  P 
Sbjct: 393 EEQVLEKARGDEEACPMDEDYLRALEYGMPPAAGEGIGIDRLVMLLTDSPSIREVILFPL 452

Query: 348 SQSNQ 352
            ++ +
Sbjct: 453 LRTER 457


>gi|317009859|gb|ADU80439.1| lysyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 501

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFETEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + GI+V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRLLAYLL--EQGIKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|299066994|emb|CBJ38189.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum CMR15]
          Length = 510

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +SLR +  +  F+E+++ 
Sbjct: 151 LRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRRHMSDAGFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  T  + F T     + +   ++L+ +PE   K+L+  G E+++     +RN 
Sbjct: 211 MLHPIPGGAT-AKPFITH---HNALDMQMFLRIAPELYLKRLIVGGFERVYEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    N+IR AA +       ++Q    +      
Sbjct: 267 GVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAALNYQGRELDLSKPFH 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  ++A         +    D   L  + ++  I        +     + +   
Sbjct: 327 RLTICQAIQKFA-----PQYTDAQLADADFLRTELKKFKIDTNAPQFLNAGVGTLQLVLF 381

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 382 EETAESQLWEPTFIVDYPVEVSPLARGSDTLPGITERFELFITGREIANGFSELNDPEDQ 441

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI
Sbjct: 442 AERFRKQVEQKDAGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVI 501

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 502 LFPHLRRE 509


>gi|148679580|gb|EDL11527.1| mCG141545, isoform CRA_d [Mus musculus]
          Length = 633

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 87/383 (22%), Positives = 156/383 (40%), Gaps = 33/383 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 237 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETP 296

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 297 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 352

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 353 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGQAYEV 412

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 413 DFTPPFRRISMVEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLD 472

Query: 220 RILIEKIEP-------NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
           +                +     T +  +P   S LA  + +    T+RFEL+    E+C
Sbjct: 473 KARDHTCARPLVGEFLEVTCISPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEIC 532

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
           NA  EL DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DRL M
Sbjct: 533 NAYTELNDPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTM 592

Query: 332 LVTGANNINEVIWTPFSQSNQEE 354
            +T +NNI EV+  P  +   ++
Sbjct: 593 FLTDSNNIKEVLLFPAMKPEDKK 615


>gi|317181491|dbj|BAJ59275.1| lysyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 501

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFETEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + GI+V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRILAYLL--EQGIKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|239814417|ref|YP_002943327.1| lysyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511538|sp|C5CSG3|SYK_VARPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|239800994|gb|ACS18061.1| lysyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 520

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 160/368 (43%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+   S+LRE+ V + F+E+++ 
Sbjct: 163 LRPLPDKFHGMADQEQKYRQRYVDLITDETARVRFTARSKAVSALREFMVGHGFLEVETP 222

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + ++L+ +PE   K+L+  G E++F    ++RN 
Sbjct: 223 MLHPIPGGA-NAKPFKTH---HNALDQEMFLRIAPELYLKRLIVGGFERVFEINRSYRNE 278

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y  LM     +IR  A+     +  ++Q    +     E
Sbjct: 279 GISVRHNPEFTMMEFYAAYWNYRDLMDFTETLIRTIADKAVGTQQLTYQGKPVDLTQPFE 338

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y               D   L    ++ G+    D       + + +   
Sbjct: 339 RLTIREAILKYT-------EAGTGVDDSAWLINALRKIGLSEEKDKLSQRSLASLQVMYF 391

Query: 227 EPNLG--INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E  +   +   T +  +P   S LA      P  T+RFELY    E  N   EL D  +Q
Sbjct: 392 EETVEEKLWQPTFIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELNDAEDQ 451

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  ++  K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 452 AARFNAQVAAKDSGDDEAMFYDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVI 511

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 512 LFPALRRE 519


>gi|17545747|ref|NP_519149.1| lysyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|39932228|sp|Q8Y0L5|SYK_RALSO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|17428041|emb|CAD14730.1| putative lysyl-trna synthetase (lysine--trna ligase) (lysrs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 510

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +SLR +  +  F+E+++ 
Sbjct: 151 LRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRHHMSDAGFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E+++     +RN 
Sbjct: 211 MLHPIPGGAA-AKPFITH---HNALDMQMFLRIAPELYLKRLIVGGFERVYEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    N+IR AA +       ++Q    +      
Sbjct: 267 GVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAALNYQGRELDLSKPFH 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D + L  + ++  I        +     + +   
Sbjct: 327 RLTICQAIQKYA-----PQYTDAQLADANFLRAELKKFKIDTNAPQFLNAGVGTLQLVLF 381

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 382 EETAESQLWEPTFIVDYPVEVSPLARGSDTLPGITERFELFITGREIANGFSELNDPEDQ 441

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI
Sbjct: 442 AERFRKQVEQKDAGDEEAMFYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVI 501

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 502 LFPHLRRE 509


>gi|194766780|ref|XP_001965502.1| GF22422 [Drosophila ananassae]
 gi|190619493|gb|EDV35017.1| GF22422 [Drosophila ananassae]
          Length = 580

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 155/374 (41%), Gaps = 28/374 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R                R  I S +R++     F+EI++ 
Sbjct: 198 LHMLPHLHFGLKDKETRYRQRYLDLILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETP 257

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+++ +PE   K L+  G ++++     +RN 
Sbjct: 258 MMNMIAGGAT-AKPFVTH---HNDLKMDLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNE 313

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  +M     ++    +          +           
Sbjct: 314 GIDLTHNPEFTTCEFYMAYADYADIMDITEQLVSGMVKSIRGSYKITYHPDGPEGPEQEL 373

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +       +   +            L     +  +      T + +  
Sbjct: 374 DFTPPFKRVSMIKTLEEKLGVQFPSADTFNTPATNQFLSQLCVKHQVECPAPRTTARLLD 433

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 434 KLVGEFIEEFCV--NPTFIIEHPQIMSPLAKYHRSIPGLTERFELFVAKKEICNAYTELN 491

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 492 DPVVQRERFEQQASDKAAGDDEAQLVDENFCTALEYGLPPTGGFGMGIDRLAMFLTDSNN 551

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 552 IKEVLLFPAMKPEE 565


>gi|114330878|ref|YP_747100.1| lysyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|114307892|gb|ABI59135.1| lysyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 532

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 160/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YRRR              L R+ I  ++RE+ V   ++E+++ 
Sbjct: 177 LRPLPEKFHGLIDQEQKYRRRYLDLITNEETRKVFLVRSKIIQAVREFLVNRGYLEVETP 236

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F T     + +   LYL+ +PE   K+L+  G EK+F     +RN 
Sbjct: 237 MMHSIPGGAT-ARPFITH---HNALDMSLYLRIAPELYLKRLVVGGMEKVFEINRNFRNE 292

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A++ +  LM    +++R  A +V       +Q    +      
Sbjct: 293 GISTRHNPEFTMLEFYEAYQDHHYLMDLTESMLREVALKVLGTTRIVYQQREMDLARPFA 352

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV +A  +Y               +R  L    Q  GI    D     +   +  E  
Sbjct: 353 RLTVMQAILKY-----HPENSEAQLNNRDDLIKILQAKGIGFNPDSGIGGLQLALFDETT 407

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  YPA  S LA     +P  T RFELY    E+ N   EL DP +Q  
Sbjct: 408 E--HLLFEPVFIVDYPAEVSPLARRNDQNPEITDRFELYIAGREIANGFSELNDPEDQAS 465

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ + K+    E    D D++  L   +P ++G  +G DRLVML+T + +I +VI  
Sbjct: 466 RFLEQARAKEAGDMEAMHYDADYIQALEYGLPPTAGEGIGIDRLVMLLTDSPSIRDVILF 525

Query: 346 PFSQSN 351
           P  +  
Sbjct: 526 PQLRKE 531


>gi|73540772|ref|YP_295292.1| lysyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|123760232|sp|Q473I5|SYK_RALEJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|72118185|gb|AAZ60448.1| Lysyl-tRNA synthetase, class-2 [Ralstonia eutropha JMP134]
          Length = 516

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 157/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    SSLR +  +  F+E+++ 
Sbjct: 157 LRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKAMSSLRRHMSDAGFMEVETP 216

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++++ +PE   K+L+  G E++F     +RN 
Sbjct: 217 MLHPIPGGAA-AKPFITH---HNALDMQMFMRIAPELYLKRLIVGGFERVFEINRNFRNE 272

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    N+IR AA + +   + ++Q    +      
Sbjct: 273 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTENLIRQAAIDASGTAVLTYQGRELDLSKPFH 332

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  ++A         +    D   L  + ++ G+  +     +     + +   
Sbjct: 333 RLTICQAIQKFA-----PQYTDAQLADADFLRTELKKFGVNTSAPQFLNAGIGTLQLVLF 387

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL D  +Q
Sbjct: 388 EETAESQLWEPTFIVDYPVEVSPLARASDTVPGITERFELFITGREIANGFSELNDAEDQ 447

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI
Sbjct: 448 ADRFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVI 507

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 508 LFPHLRRE 515


>gi|158319501|ref|YP_001512008.1| lysyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158139700|gb|ABW18012.1| lysyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 495

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 94/362 (25%), Positives = 167/362 (46%), Gaps = 27/362 (7%)

Query: 4   IPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +    +D    YR+R              + R+    +++E+     ++E+++  L 
Sbjct: 140 LPDKWHGLKDHDLRYRQRYVDLIVNPEVKKTFVTRSKAIKAIKEFLDNRGYLEVETPILG 199

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G   + R F T     + +   +YL+ + E   K+L+  G +K++     +RN    
Sbjct: 200 TLAGGA-NARPFITH---HNTLDIDMYLRIANELFLKRLIVGGFDKVYEMGRMFRNEGMS 255

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPEYIT 169
             H PEFT +E Y A+  Y  +M    NI+  AA +       ++Q    +       +T
Sbjct: 256 IKHNPEFTSIELYEAYADYNDMMDITENIVAYAAEKALGTTKINYQGQEIDLTPPWNRMT 315

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + EA  +YAN+D        +          A++ G+ V        I S +  E  E +
Sbjct: 316 MVEACRKYANVDFD------EVKTDEEAIAIAKKLGLEVNPAMKKGHIISLVFEEFGEKH 369

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + ++P   S LA   P DP FT RFE +    E+ NA  EL DPI+QR RF 
Sbjct: 370 --LIQPTFITQHPVEISPLAKRNPEDPAFTNRFEAFINTWEIANAFSELNDPIDQRGRFM 427

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++++++   +E + +DEDFL  +   +P + G+ +G DRL+ML+T + +I +V+  P  
Sbjct: 428 DQLEQREAGDDEAHVLDEDFLNAIEVGLPPTGGLGIGIDRLMMLITNSPSIRDVLLFPTM 487

Query: 349 QS 350
           + 
Sbjct: 488 KP 489


>gi|119776009|ref|YP_928749.1| lysyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166229824|sp|A1S9M3|SYK_SHEAM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|119768509|gb|ABM01080.1| lysyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 500

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 85/367 (23%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + +++R + ++ +F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQETRYRQRYVDLIVNEDSREAFKMRSKVVAAIRNFMIKKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHVIPGGAS-ARPFVTH---HNALDIEMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ L+     ++   A+         +     +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYKDLIDLTEEMLSSIAKELLGDTKLPYGEHVIDFGGPYT 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA   Y   +     +   +  +   +   A+  GI      +   +   I  E 
Sbjct: 315 RMSMLEAIKHYNPDNATIQAMTYEEVKNIDFMRKLAKDVGIETETFWSCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AEPK--LMQPTFITGYPADISPLARRSDGNDFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +RF+ +++ K    +E    D DF+  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 NRFKAQVEAKDAGDDEAMFYDADFITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|94676799|ref|YP_588620.1| lysyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123384151|sp|Q1LTU4|SYK_BAUCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|94219949|gb|ABF14108.1| lysyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 506

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 99/364 (27%), Positives = 161/364 (44%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  IP++     ++   YR+R                R+ I + +R++  +  FIE+++ 
Sbjct: 151 LRPIPNKFHGIVDKQIRYRQRYLDLITNKNSFNLFKTRSQIITEIRQFLNKEDFIEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + +   LYL+ +PE   K+L+  G EKIF     +RN 
Sbjct: 211 ILQSLPGGAT-ARPFIT---YHNALDMNLYLRIAPELYLKQLIIGGFEKIFEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA-AEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    N++      V    I  + N+  +      
Sbjct: 267 GLSAHHNPEFTMMELYIAYADYHDVMLLTQNLLNTITNHVLGTNIIQYGNLKLDFSKNFV 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA   Y        + +    D+      A+  GI +        I + I  +  
Sbjct: 327 KMTMKEAICHY-----NKQILSKHLDDKMQAITCAKNIGIHIDQKWGLGRIQTEIFEKTT 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     +P F  RFEL+    E+ N   EL D  +Q +
Sbjct: 382 EKH--LLQPTFITSYPIEVSPLARRNDNNPFFADRFELFIGGYEIGNGFSELNDYEDQAN 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R  ++   K    NE+   DED++  L   +P ++G+ +G DRLVML+T ++ I +VI  
Sbjct: 440 RLIEQATIKNSGDNESMFYDEDYIIALEHGLPPTAGLGIGIDRLVMLLTNSHFIRDVILF 499

Query: 346 PFSQ 349
           P  +
Sbjct: 500 PTMR 503


>gi|254431514|ref|ZP_05045217.1| lysyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197625967|gb|EDY38526.1| lysyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 522

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 158/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R +  S++R +  E  F+EI++ 
Sbjct: 143 LQPLPDKWHGLADVEKRYRQRYLDLIVSPHTRETFRRRALAVSAMRRWLDERGFLEIETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F T     + +  PL L+ + E   K+L+  G E+++     +RN 
Sbjct: 203 VLQSQPGGA-DARPFETH---HNALDLPLTLRIATELHLKRLVVGGFERVYELGRIFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M+    ++     +V      ++Q    +      
Sbjct: 259 GVSTRHNPEFTSVEIYQAYADYTDMMELTEQLLAHVCQQVCGTTAITYQGTAIDLAPPWR 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
             T+ +   +   +D            R       + AG+ V    D+   +      ++
Sbjct: 319 RATMHDLVLQATGLDFTGF------ASRAEAAAAMEAAGLVVPEPADSVGRLLVEAFEQR 372

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL+DP++QR
Sbjct: 373 VEDT--LIQPTFVLDYPVENSPLARAHRSKPGMVERFELFIVGRETANAFSELIDPLDQR 430

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E +   K     E + +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI 
Sbjct: 431 QRLEAQQARKAAGDLEAHGVDEDFLQALEVGMPPTGGLGIGIDRLVMLLTDSTSIRDVIA 490

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 491 FPLLKPE 497


>gi|171463252|ref|YP_001797365.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238689052|sp|B1XTS4|SYK_POLNS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|171192790|gb|ACB43751.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 514

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 166/372 (44%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R+   +SLR + ++  F+E+++ 
Sbjct: 150 LRPLPDKFHGLSDLETKYRQRYVDLIVNPESRSTFKARSNAIASLRRHMLDADFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F   H +RN 
Sbjct: 210 MLHPIPGGAA-AKPFITH---HNALDMQMFLRIAPELYLKRLVVGGFERVFEINHNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +     + + Q    +     +
Sbjct: 266 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEGLIRAAAIDAQGTAVLTHQGRELDLSKPFQ 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA----HDDTWSDIFSRIL 222
            +T+ EA  +Y     G + +     D + + ++ ++ G         +     +   + 
Sbjct: 326 RLTITEAILKYCGQS-GKSYEAAQLEDANFIRVELKKGGENPDAPTLKNAGIGALQLALF 384

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
               E +  +   T +  YP   S LA      P  T+RFEL+    E+ N   EL D  
Sbjct: 385 ELVAEEH--LWEPTYIIDYPIEVSPLARESDTRPGITERFELFITGREIANGFSELNDAE 442

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           +Q +RF K++++K+    E    D DF+  L   MP + G  +G DRL+ML+T A NI +
Sbjct: 443 DQANRFRKQVEQKEAGDEEAMYFDHDFIRALEYGMPPTGGCGIGIDRLIMLLTDAPNIRD 502

Query: 342 VIWTPFSQSNQE 353
           VI  P  +  ++
Sbjct: 503 VILFPHLRREED 514


>gi|254427233|ref|ZP_05040940.1| lysyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196193402|gb|EDX88361.1| lysyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 504

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 158/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  I + +R + V+  F+E ++ 
Sbjct: 148 LRPLPEKHKGLTDTEAKYRQRYVDLIVNEDTRKAFQIRAKIVAGIRNFLVQKDFVEAETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + +   +YL+ +PE   K+L+  G EK+F     +RN 
Sbjct: 208 MLQVIPGGAT-ARPFITH---HNSLDLDMYLRIAPELYLKRLVVGGFEKVFEINRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM    +++R  AE        ++Q    +      
Sbjct: 264 GLSTRHNPEFTMLEFYQAYGDYHDLMNLTEDMLRTLAETVLGTTDVAYQGDVYDFGKPFT 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV ++   +        +D     D       A   GI +        +   I  + +
Sbjct: 324 RMTVFDSILHF-----NPDMDAAKLADPDGAREIATGLGIPLKDGYGLGKVQIEIFEKTV 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T+RFE +    E+ N   EL D  +Q  
Sbjct: 379 EHR--LKDPTFITEYPTEVSPLARRMDDNPFVTERFEFFVGGREIANGFSELNDAEDQAE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++EK    +E    DED++  L   +P ++G  +G DRLVML T A +I +VI  
Sbjct: 437 RFRQQVEEKAAGDDEAMFYDEDYVVALEHGLPPTAGEGIGIDRLVMLFTDAPSIRDVILF 496

Query: 346 PFSQSN 351
           P  +  
Sbjct: 497 PHMRPQ 502


>gi|67522913|ref|XP_659517.1| hypothetical protein AN1913.2 [Aspergillus nidulans FGSC A4]
 gi|40745922|gb|EAA65078.1| hypothetical protein AN1913.2 [Aspergillus nidulans FGSC A4]
 gi|259487270|tpe|CBF85812.1| TPA: lysyl-tRNA synthetase, hypothetical (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 606

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 85/372 (22%), Positives = 158/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H IPS+ +   +++  YR+R              + R+ + + +R +F +  F+E+++ 
Sbjct: 216 LHAIPSEHYGFQDKEQRYRQRYLDLIMNDKSRNVFITRSKMVTYIRNFFDQRDFVEVETP 275

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     +     L+++ +PE   K L+  G E+++     +RN 
Sbjct: 276 MMNAIAGGAT-AKPFITH---HNEHDMNLFMRVAPELYLKMLIVGGLERVYELGRQFRNE 331

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     +M     ++    +       +  +         N 
Sbjct: 332 GVDLTHNPEFTTCEFYWAYADVYDVMNLTEELVSGLVKHITGGYETTFHTQTGEEYKVNW 391

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    + +  A                       L    ++ G+  +   T + +  ++
Sbjct: 392 KAPWRRVEMIPALEEATGEKFPPGDQLHTAETGEFLKKVLKKTGVECSPPLTNARMLDKL 451

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +  +    +RFE + C  E+ NA  EL DP
Sbjct: 452 VGEFIEETC--INPTFITGHPQMMSPLAKYHRQNAGLCERFEAFVCKKEIVNAYTELNDP 509

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 510 FDQRLRFEEQARQKDQGDDEAQIIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 569

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 570 EVLAFPFMKDDK 581


>gi|297205109|ref|ZP_06922505.1| lysine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297149687|gb|EFH29984.1| lysine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 513

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 148 LRPLPDKYHGLQNVEQIYRQRYLDLMTNHDSYMRFVHRTKIIQAIRDYLNNRDFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 208 VLHNIPGGA-EARPFITH---HNALDIDLYLRIALELPLKRLIVGGMERVYEIGRVFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   II+ AA+V       ++Q    +      
Sbjct: 264 GVDTRHNPEFTELETYCAYWDFHDVMDEAEGIIKAAAKVVTDDGKVNYQGTEIDLGKPFR 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A++ GI V        I +    E  
Sbjct: 324 RVHMVDLIKEQTGVDFWKPMT------LDEAKKVAEEHGIHVEPFWKVGHIINAFFEEFG 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  I   T +  +P   S LA     DPRFT RFE++   +E  NA  EL DPI+QR 
Sbjct: 378 EKS--IVNPTFVYGHPVEISPLAKKNADDPRFTDRFEIFIMGMEYGNAFSELNDPIDQRE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDEDF+  L   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 436 RFEAQMAERDAGNDEADVIDEDFVRALEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 495

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 496 PTMRPER 502


>gi|147898923|ref|NP_001080050.1| lysyl-tRNA synthetase [Xenopus laevis]
 gi|28302358|gb|AAH46578.1| Kars-prov protein [Xenopus laevis]
          Length = 605

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 156/376 (41%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R  + + LR++     F+EI++ 
Sbjct: 222 LHMLPHLHFGLKDKETRFRQRYLDLILNDYVRQKFIVRAKLITYLRKFLDNLGFLEIETP 281

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 282 MMNVIPGGAV-AKPFITH---HNELDMKLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 337

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 338 GIDLTHNPEFTTCEFYMAYADYNDLMEITEKLLSGMVKHITGGYKVTYHPEGPEGPVYEI 397

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++     +     L  T     +  R LL     +  +      T + +  
Sbjct: 398 DFTPPFRRISMVHELEKALGKKLPPTDQFETEETRKLLDDICVEKEVECPPPRTTARLLD 457

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ + +E        T +  +P   S LA  + ++   T+RFEL+    E+CNA  EL 
Sbjct: 458 KLVGDFLEVTC--INPTYICDHPQIMSPLAKWHRSEKGLTERFELFVMKKEICNAYTELN 515

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI QR  FE + + K    +E   IDE F   L   +P ++G  MG DRL M +T +NN
Sbjct: 516 DPIRQRELFEDQAKAKAAGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 575

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +    +
Sbjct: 576 IKEVLLFPAMKPEDNK 591


>gi|325525096|gb|EGD02989.1| lysyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 508

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 153/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  +  F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQEMRYRQRYVDLIVTPETRDTFRARTKAIASIRKFMGDADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR  A +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQTAIDALGTATIQYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  ++A         +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIQKFA-----PQYTDGQLSDDAYLRSELKRLGVDVTQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAEAQLWEPTFIIDYPVEVSPLARASDTVPGITERFELFMTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|170579277|ref|XP_001894758.1| lysyl-tRNA synthetase [Brugia malayi]
 gi|158598519|gb|EDP36395.1| lysyl-tRNA synthetase, putative [Brugia malayi]
          Length = 597

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 29/376 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +  +  +  YR R              + R+   S LR Y     F+E+++ 
Sbjct: 217 LHMLPHTHFGLKNQETRYRMRYLDLIMNTDVKNKFVTRSRTISFLRRYLDNLGFLEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   LYL+ +PE   K L+  G ++++     +RN 
Sbjct: 277 MMNLIAGGAT-AKPFITH---HNDLDMDLYLRVAPELYLKMLVVGGIDRVYEIGRVFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y A+  YE LMK   +++       +       +           
Sbjct: 333 GIDQTHNPEFTTCEFYMAYADYEDLMKITEDMLSRLVYSIHGTYKIQYHPNGIGEEPVYE 392

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +     + + + +       +                    A +  +      T + + 
Sbjct: 393 VDFTPPFQRVDIYDGLQEKLGVKFPPANTLDTDEANKFFDKLAVENNVECPAPRTTARLL 452

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++ E +EP       T L  +P   S LA  + + P  T+RFEL+    E+ NA  EL
Sbjct: 453 DKLIGEFLEPT--FISPTFLTGHPQLMSPLAKWHRSMPGLTERFELFVVTKEIVNAYTEL 510

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP+ QR RFE++ ++K+   +E   IDE+F   L   +P ++G  +G DRL M++T +N
Sbjct: 511 NDPLTQRLRFEEQAEQKQAGDDEAQIIDENFCTALEYGLPPTAGWGIGIDRLTMILTDSN 570

Query: 338 NINEVIWTPFSQSNQE 353
           NI EV++ P  + +++
Sbjct: 571 NIKEVLFFPAMRPDEK 586


>gi|256844418|ref|ZP_05549904.1| lysyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256849194|ref|ZP_05554627.1| lysyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047210|ref|ZP_06020168.1| lysyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|256613496|gb|EEU18699.1| lysyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256713970|gb|EEU28958.1| lysyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260572455|gb|EEX29017.1| lysyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 511

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 161/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 137 LRPLPDKYHGLKDVEAIYRQRYLDLITNHDSYMRFVHRTQIIQAIRDYLNGQNFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 197 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  Y  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 253 GLDTHHNPEFTELESYAAYWDYHDVMDEAEGIIRAAAKVVSDDGKITYQGTDIDLGKPFR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +   +          A+   I V        I +    +  
Sbjct: 313 RVHMVDLIKEKTGVDFWKPMTLEEAT------KIAEDHDIHVEKFWKVGHIINAFFEKYC 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 367 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRE 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E++   +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 425 RFEAQMEEREAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 484

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 485 PTMRPERVE 493


>gi|260439200|ref|ZP_05793016.1| lysine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292808215|gb|EFF67420.1| lysine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 681

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+MI   +R +     F+E+++ 
Sbjct: 178 LQILPEKYHGLTDTDARYRQRYVDLIMNSEVKDTFIKRSMIIKEIRNFLAGRDFMEVETP 237

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  +PG     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 238 MLVANPGGAA-ARPFETHY---NALNEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 293

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M+   ++ R  A +V     F++  +  +     E
Sbjct: 294 GVDTRHNPEFTLMELYQAYTDYNGMMELTESMFRYLAEKVCGSTKFTYNGIEIDFGKPFE 353

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +   +YA ID      + +          A++  I          I +    E  
Sbjct: 354 RITMTDCVKKYAGIDFDAVKTDEE------AKALAKEHNIEYEERHNKGHILNLFFEEYC 407

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P DP   +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 408 EKE--LVQPTFVMDHPIAISPLTKKKPTDPEKVERFELFINGWEMCNAYSELNDPIDQRE 465

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +         E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 466 RFALQDAAAAAGDEEAEHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDSPAIRDVLLF 525

Query: 346 PFSQS 350
           P  +S
Sbjct: 526 PTMKS 530


>gi|145297979|ref|YP_001140820.1| lysyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166229791|sp|A4SJK0|SYK_AERS4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|142850751|gb|ABO89072.1| lysyl tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 512

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 88/373 (23%), Positives = 157/373 (42%), Gaps = 31/373 (8%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D   R              R   + R  + + +R++F + +F+E+++ 
Sbjct: 151 LRPLPEKHKGLTDQEARCRQRYLDLIANEESRKTFMIRTKVVAGIRKFFNDKRFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 211 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVYEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN------CNP 161
                H PEFTM+E+Y A+  Y  LM     ++R  A+                    + 
Sbjct: 267 GISVRHNPEFTMIEFYMAYADYIDLMDLTEELLRTLAQDILGDTKIRYAKEGEEGLTIDF 326

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
               + +T+ ++  ++        +   D          A+   I +        + + I
Sbjct: 327 GQPFQRLTMVDSILKF-----NPDVTPADLATLESAKAVAKHLHIELMKGWELGHVITAI 381

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL D 
Sbjct: 382 FEETVE--HMLLQPTFITEYPAAVSPLARRNDVNPDVTDRFEFFIGGRELANGFSELNDA 439

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +Q  RF+ ++ +K+   +E    D DF+  L   +P ++G  +G DRLVML T ++ I 
Sbjct: 440 EDQAKRFQDQVNQKEAGDDEAMFYDADFVTALEHGLPPTAGQGIGIDRLVMLFTNSHTIR 499

Query: 341 EVIWTPFSQSNQE 353
           +VI  P  +  Q+
Sbjct: 500 DVILFPALRPQQK 512


>gi|110598631|ref|ZP_01386897.1| lysyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110339743|gb|EAT58252.1| lysyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 514

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 98/377 (25%), Positives = 167/377 (44%), Gaps = 39/377 (10%)

Query: 1   MHQIPSQP-------------WWNRDFHYRRRPF-----------LLKRNMIQSSLREYF 36
           +  IP                + +R+  YR+R              +KR+ + S +R++F
Sbjct: 151 LRPIPVPKEKEVDGEKVVFDAFSDREQRYRQRYVDLIVNPEVRQTFIKRSAVVSFMRQFF 210

Query: 37  VENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
               ++E+++  LQ   G     R F+T     + +   LYL+ + E   K+L+  G + 
Sbjct: 211 SSQGWLEVETPILQPIYGGAA-ARPFTTH---HNALDMELYLRIANELYLKRLIVGGFDG 266

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQ 155
           +F FA  +RN      H PEFT +E Y A++ Y  +M+    +    A   N+   + F 
Sbjct: 267 VFEFAKDFRNEGIDRFHNPEFTQVELYVAYKDYNWMMELVEELFYRTALEVNKSEVTLFL 326

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
               +     + +++ +A   Y          N        L   A+  G+ +    +  
Sbjct: 327 GNEISLKPPFKRLSIIDAIEEYCG-------KNIRGKSEVELRNVAKDLGLELDPKISSG 379

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            I   I  E +EP   +   T +  YP   S LA  + + P   +RFEL     E+CN+ 
Sbjct: 380 KIIDEIFGEFVEPK--LIQPTFITDYPTEMSPLAKEHRSQPGIVERFELIVGGKEVCNSF 437

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP+ QR R E + + +++   E   +DEDFL  L   MP  +G+ +G DR+VML+T
Sbjct: 438 SELNDPVVQRERLESQAKLRQRGDEEAMIVDEDFLRALEYGMPPCAGLGIGIDRMVMLIT 497

Query: 335 GANNINEVIWTPFSQSN 351
           G ++I +VI+ P  +  
Sbjct: 498 GQDSIRDVIFFPHMKPE 514


>gi|152980207|ref|YP_001352950.1| lysyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166229808|sp|A6SXF3|SYK_JANMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|151280284|gb|ABR88694.1| lysyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 511

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 154/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    SS+R +  EN F+E+++ 
Sbjct: 156 LRPLPDKFHGLADQETKYRQRYVDLIMNEDTRRTFKARTAAISSIRRFMAENDFMEVETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G +++F     +RN 
Sbjct: 216 MLHTIPGGAA-AKPFVTH---HNALDMEMFLRIAPELYLKRLVVGGFDRVFEINRNFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     +IR AA +       ++     +      
Sbjct: 272 GVSIRHNPEFTMMEFYAAYTDYKWLMDFTEAVIRQAAIDAHGTATLTYGGRELDLAKPFH 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+  A  +YA         N    D   +  + ++ G++         +   +  E  
Sbjct: 332 RLTIVGAINKYA-----PQYTNEQLHDAEFIKAELKKFGVKPHAHSGLGALQLALFEETA 386

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    E+ N   EL D  +Q  
Sbjct: 387 EAQ--LWEPTYIIDYPVEVSPLARASDTVAGITERFELFMVGREIANGFSELNDAEDQAA 444

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K     E    D D++  L   MP + G  +G DRL+M++T + NI +V+  
Sbjct: 445 RFQAQVAAKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLMMIITDSPNIRDVLLF 504

Query: 346 PFSQSN 351
           P  +  
Sbjct: 505 PHLRRE 510


>gi|332673025|gb|AEE69842.1| lysine--tRNA ligase [Helicobacter pylori 83]
          Length = 501

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFETEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + GI+V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SRDILEKEDRLLAYLL--EQGIKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|304311880|ref|YP_003811478.1| Lysyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301797613|emb|CBL45834.1| Lysyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 500

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 153/366 (41%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+     +R Y  +  F+E+++ 
Sbjct: 145 LRPLPDKFKGLSDQEMRYRQRYVDLIVNEEVRNTFRVRSQTVDYIRNYLKQRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F T     + +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 205 MMQVIPGGAT-ARPFVT---FHNALDIDLYLRIAPELFLKRLVVGGFERVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM     ++R  AE         +Q    +      
Sbjct: 261 GLSTRHNPEFTMLEFYQAYADYRDLMDLTEEMLRGLAETVLGSTQVHYQGDVYDFGKPFR 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV EA   +        L       R      A +  I +        I   I     
Sbjct: 321 RMTVVEAILHF-----NPDLRAEQLATREAACEVAARLEIAIKDSYGLGKIQIEIFEATA 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFE +    E+ N   EL D  +Q  
Sbjct: 376 EHQ--LKDPTFITAYPTEVSPLARRNDHDPFVTDRFEFFVGGREIANGFSELNDSEDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+K+++ K    +E    D+D++  L   +P ++G  +G DRLVML+T + +I +VI  
Sbjct: 434 RFQKQVESKDAGDDEAMHFDQDYITALEYGLPPTAGEGIGIDRLVMLLTDSPSIRDVILF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRPQ 499


>gi|117617708|ref|YP_857858.1| lysyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|166229790|sp|A0KNK7|SYK_AERHH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|117559115|gb|ABK36063.1| lysyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 511

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 87/372 (23%), Positives = 155/372 (41%), Gaps = 31/372 (8%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D   R              R   + R  + + +R++  + +F+E+++ 
Sbjct: 151 LRPLPEKHKGLTDQEARCRQRYLDLIANEESRKTFVTRTKVVAGIRKFLNDKRFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 211 MMQVIPGGAS-ARPFITH---HNALDIDMYLRIAPELYLKRLVVGGFERVYEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN------CNP 161
                H PEFTMLE+Y A+  Y  LM     ++R  A+                    + 
Sbjct: 267 GISVRHNPEFTMLEFYMAYADYIDLMDLTEEMLRTLAQDILGDTKIRYAKEGEEGLTIDF 326

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
               + +++ ++  +Y        +   D          A++  I +        + + I
Sbjct: 327 GQPFQRLSMVDSILKY-----NPDVTRDDLATLEKATAVAKRLHIELMKSWELGHVITAI 381

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL D 
Sbjct: 382 FEETVE--HMLLQPTFITEYPAAVSPLARRNDQNPDVTDRFEFFIGGRELANGFSELNDA 439

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +Q  RF+ ++ +K    +E    D DF+  L   +P ++G  +G DRLVML T ++ I 
Sbjct: 440 EDQAERFQAQVDQKAAGDDEAMFYDADFVTALEHGLPPTAGQGIGIDRLVMLFTNSHTIR 499

Query: 341 EVIWTPFSQSNQ 352
           +VI  P  +  +
Sbjct: 500 DVILFPALRPQK 511


>gi|326799815|ref|YP_004317634.1| lysyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326550579|gb|ADZ78964.1| Lysyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 572

 Score =  328 bits (840), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 102/355 (28%), Positives = 161/355 (45%), Gaps = 26/355 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +F YR+R               K   I+S++R++  E   IE+D+  LQ  PG     
Sbjct: 161 DPEFRYRQRYVDLVVNPHVRETFTKVTKIKSAIRQFLDEQGAIEVDTPVLQSIPGGAA-A 219

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F T     + +  PLYL+ + E   K+L+  G + ++ F+  +RN      H PEFT+
Sbjct: 220 RPFITH---HNALDIPLYLRIANELYLKRLIVGGYDWVYEFSRNFRNEGMDRTHNPEFTV 276

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPEYITVAEAFARYA 178
           LE+Y A++ Y  +M     +    A   N K   +  +   N  +  + I++ +A   +A
Sbjct: 277 LEFYVAYKDYLWMMDITEQLFEKVALATNGKTTITVGDKEINFAAPYKRISIYDAIKEHA 336

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D+          D   L    +Q  I V        +   I  EK E +      T +
Sbjct: 337 GFDVSG-------LDEVGLRDVCKQLHIPVDESMGKGKLIDEIFGEKCEHH--FIQPTFI 387

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L   + +     +RFEL     EL NA  EL DPI+Q  RFE +++  ++ 
Sbjct: 388 IDYPVEMSPLTKKHRSKEGLVERFELMVNGKELANAYSELNDPIDQLKRFEDQLKLMERG 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +E   ID DFL  L   MP +SGI +G DRL ML+T   +I +V++ P  +  +
Sbjct: 448 DDEAMFIDYDFLRALEYGMPPTSGIGIGIDRLAMLMTNQASIQDVLFFPQMRPEK 502


>gi|258544155|ref|ZP_05704389.1| lysine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520597|gb|EEV89456.1| lysine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 497

 Score =  328 bits (840), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I S +R +F    F+E+++ 
Sbjct: 143 LRPLPEKYHGLSDQETRYRQRYVDLITNEDSRNTFIIRSKIVSYIRRFFEARDFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 203 MMHPIPGGAT-AKPFITH---HNALDMPLYLRIAPELYLKRLVVGGFERVFEINRSFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM     + +  A  V      ++Q V  +      
Sbjct: 259 GVSTRHNPEFTMLEYYQAYADYHDLMDQTEELFQGLAREVLGSPQITYQGVAIDLGQPFA 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  ++A       LD+P      L     Q+A            + + +  E +
Sbjct: 319 RLTMLDAIRQHAP-QHAAILDDPAALAAVLRDTYKQKA----DAAMPIGSLHTLLFEEAV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP+  S LA      P    RFEL+    E+ N   EL D  +Q  
Sbjct: 374 EHQ--LVQPTFITAYPSVVSPLARRNDDTPDICDRFELFIGGREVANGFSELNDAEDQAE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +        +E    D D++  L   MP ++G  +G DRLVML+T A +I +V+  
Sbjct: 432 RFRAQAAAFDAGDDEAMHYDADYIRALEYGMPPTAGEGIGIDRLVMLLTDAPSIRDVLLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PHMRPE 497


>gi|114561769|ref|YP_749282.1| lysyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122300806|sp|Q087X1|SYK_SHEFN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|114333062|gb|ABI70444.1| lysyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 500

 Score =  328 bits (840), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + +++R + V+ +F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRNAFIMRSKVVAAIRNFMVKKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHVIPGGAS-ARPFVTH---HNALDMAMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A+         +            
Sbjct: 255 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLGSIAQELLGSTSMPYGEETVEFGGAYA 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ EA  +Y   +     +      D   +   A   GI++    T   +   I  E 
Sbjct: 315 RLSMLEAIQKYNPDNATIQAMTYEQVKDVEFMRDLASSLGIKLEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AETK--LMQPTFITGYPADISPLARRNDNNDFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 NRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|295692147|ref|YP_003600757.1| lysyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030253|emb|CBL49732.1| Lysyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 515

 Score =  328 bits (840), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 161/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEAIYRQRYLDLITNHDSYMRFVHRTQIIQAIRDYLNGQNFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  Y  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GLDTHHNPEFTELESYAAYWDYHDVMDEAEGIIRAAAKVVSDDGKITYQGTDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +   +          A+   I V        I +    +  
Sbjct: 318 RVHMVDLIKEKTGVDFWKPMTLEEAT------KIAEDHDIHVEKFWKVGHIINAFFEKYC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 372 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E++   +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEAQMEEREAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPERVE 498


>gi|217034008|ref|ZP_03439430.1| hypothetical protein HP9810_891g12 [Helicobacter pylori 98-10]
 gi|216943516|gb|EEC22967.1| hypothetical protein HP9810_891g12 [Helicobacter pylori 98-10]
          Length = 501

 Score =  328 bits (840), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFETEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + GI+V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRLLAYLL--EQGIKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|317176998|dbj|BAJ54787.1| lysyl-tRNA synthetase [Helicobacter pylori F16]
 gi|317179421|dbj|BAJ57209.1| lysyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 501

 Score =  328 bits (840), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFETEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + GI+V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRLLAYLL--EQGIKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|227878375|ref|ZP_03996330.1| lysine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|227862054|gb|EEJ69618.1| lysine--tRNA ligase [Lactobacillus crispatus JV-V01]
          Length = 516

 Score =  328 bits (840), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 161/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEAIYRQRYLDLITNHDSYMRFVHRTQIIQAIRDYLNGQNFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  Y  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GLDTHHNPEFTELESYAAYWDYHDVMDEAEGIIRAAAKVVSDDGKITYQGTDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +   +          A+   I V        I +    +  
Sbjct: 318 RVHMVDLIKEKTGVDFWKPMTLEEAT------KIAEDHDIHVEKFWKVGHIINAFFEKYC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 372 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E++   +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEAQMEEREAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPERVE 498


>gi|303328113|ref|ZP_07358552.1| lysine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302861939|gb|EFL84874.1| lysine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 527

 Score =  328 bits (840), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +    +D    YR+R               KR++I    R +  E+ F+E+++ 
Sbjct: 172 MRPLPEKYHGLKDMETRYRQRYVDLIVTPRAREIFAKRSLIVREFRRFMEEHGFMEVETP 231

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G  T  + F T     + +   L+L+ +PE   K+LL  G EK+F    ++RN 
Sbjct: 232 IMQPLAGGAT-AKPFKTH---HNALDLDLFLRIAPELYLKRLLVGGFEKVFELNRSFRNE 287

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--P 165
                H PEFTM E+Y A+ ++E LM     +    A  A               +    
Sbjct: 288 GIDTRHNPEFTMCEFYWAYATFEDLMNFTEKLFAHLAMAACGTTVVTYQGQEIDLTPGHW 347

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + ++  ++                   D   +    ++ G + A  ++   + +++    
Sbjct: 348 KRLSFYDSLTEIGGHSPDF------YNDYSKVRNYIRERGEKAADSESLQKLQAKLFDLD 401

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +     +  YP   S L+      P  T RFEL+    EL NA  EL DP++QR
Sbjct: 402 VEGK--LIQPHFIYHYPTEISPLSRRNDLRPEITDRFELFITGRELSNAFSELNDPVDQR 459

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE++++E++   +E + +DED+L  L   MP ++G  +G DRLVML+T + +I EVI 
Sbjct: 460 LRFEEQVREREAGDDEAHSMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSASIREVIL 519

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 520 FPLLRPE 526


>gi|53719891|ref|YP_108877.1| lysyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|81379446|sp|Q63SN9|SYK_BURPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52210305|emb|CAH36284.1| lysyl-tRNA synthetase [Burkholderia pseudomallei K96243]
          Length = 508

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 152/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  +  F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR  A +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIRYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIQKYA-----PNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAEAQLWEPTFIIDYPIEVSPLARESDTVAGITERFELFVTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|326316036|ref|YP_004233708.1| lysyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323372872|gb|ADX45141.1| lysyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 518

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 163/368 (44%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   S +RE+ V++ F+E+++ 
Sbjct: 161 LRPMPDKFHGVADQEVKYRQRYVDLMTDEAARKRFIARSKAVSGIREFMVQHGFLEVETP 220

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 221 MLHPIPGGA-NAKPFVTH---HNALEQEMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 276

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y  LM     ++R AA + A     ++Q    +     E
Sbjct: 277 GISVRHNPEFTMMEFYAAYWNYRDLMDFTEQLVRDAATKAAGSLQLTYQGRAVDLSQPFE 336

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  R+               D   L    ++ G+    D   +   + + +   
Sbjct: 337 RLTIREAILRHT-------EAGEGVDDAAWLVAALRKLGLSEEKDRLSTRTLAGLQVLYF 389

Query: 227 EPNLGI--NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E  +       T +  +P   S LA      P  T+RFELY    E  N   EL D  +Q
Sbjct: 390 EETVEDKLWQPTFIMEHPTEISPLARANDTRPEVTERFELYITGREFGNGFSELNDAEDQ 449

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+ +++ K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 450 AARFQSQVEAKDSGDDEAMYFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVI 509

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 510 LFPALRRE 517


>gi|328788617|ref|XP_623936.2| PREDICTED: lysyl-tRNA synthetase [Apis mellifera]
          Length = 587

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 88/373 (23%), Positives = 162/373 (43%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +   +++  +R+R                R  I + +R++  E  F+E+++ 
Sbjct: 197 LHMLPNLYFGLKDKETRFRQRYLDLILNDKVRKTFHIRAKIVAYVRKFLDELGFLEVETP 256

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 257 MMNIIPGGAT-AKPFITH---HNELNMDLYMRIAPELYLKMLVIGGLDRVYEIGRQFRNE 312

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--------NC 159
                H PEFT  E+Y A+  Y  LM    ++I    +  +       +           
Sbjct: 313 GIDLTHNPEFTTCEFYMAYADYNDLMSITEDMISGMIKSIHGSYKITYHPDGPEGEAVEI 372

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +       I L +     +     +L     +  I      T + +  
Sbjct: 373 DFTPPFKRLSMIKTLEEVLKIKLPSADKLNNSETNQILNDLCTKYEIECPPPRTTARLLD 432

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + ++   T+RFEL+    E+CNA  EL 
Sbjct: 433 KLVGEFIEETC--INPTFILDHPQIMSPLAKWHRSEQGLTERFELFIMKKEICNAYTELN 490

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI QR RFE++ ++K     E   +DE F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 491 DPIIQRERFEEQAKDKAAGDEEAQVVDETFCTALEYGLPPTAGWGMGIDRITMFLTDSNN 550

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 551 IKEVLLFPQMKPD 563


>gi|325297359|ref|YP_004257276.1| Lysyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324316912|gb|ADY34803.1| Lysyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 576

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 95/374 (25%), Positives = 155/374 (41%), Gaps = 35/374 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              L+R  +  ++R    E  
Sbjct: 143 LRPLPIVKYKDGVAYDKFEDPELRYRQRYVDLIVNDGVKDIFLQRATVIRTIRRVLDEAG 202

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  + F T     + +   +YL+ + E   K+L+  G E ++  
Sbjct: 203 YTEVETPTLQNIAGGAS-AKPFITHF---NALDTDMYLRIATELYLKRLIVGGFEGVYEI 258

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     ++       N K     + N  
Sbjct: 259 GKNFRNEGMDRNHNPEFTCMELYVQYKDYNWMMAFTEKLLETVCIAVNGKPEREIDGNII 318

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            F      + + EA       DL          D   +    Q+  + +        +  
Sbjct: 319 SFKAPYRRLPILEAIKEKTGYDLTGM-------DEAQIREVCQKLNMEIDDTMGKGKLID 371

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 372 EIFGEFCEGT--FIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 429

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++M+   K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 430 DPIDQEERFKEQMRLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKTF 489

Query: 339 INEVIWTPFSQSNQ 352
           I EV++ P  +  +
Sbjct: 490 IQEVLFFPQMRPEK 503


>gi|300692009|ref|YP_003753004.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum PSI07]
 gi|299079069|emb|CBJ51731.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum PSI07]
          Length = 510

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 154/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +SLR +  +  F+E+++ 
Sbjct: 151 LRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRRHMGDAGFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E+++     +RN 
Sbjct: 211 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVYEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    N+IR AA +       ++Q    +      
Sbjct: 267 GVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSATLNYQGRELDLSKPFH 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         N    D   L  + ++  I        +     + +   
Sbjct: 327 RLTITQAIQKYA-----PQYTNAQLADADFLRTELKKFKIDTHAPQFLNAGVGTLQLVLF 381

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 382 EETAEAQLWEPTFIIDYPVEVSPLARGSDTLPGITERFELFITGREIANGFSELNDPEDQ 441

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI
Sbjct: 442 AERFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVI 501

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 502 LFPHLRRE 509


>gi|217031943|ref|ZP_03437445.1| hypothetical protein HPB128_3g62 [Helicobacter pylori B128]
 gi|298736875|ref|YP_003729405.1| lysyl-tRNA synthetase, class II [Helicobacter pylori B8]
 gi|216946412|gb|EEC25017.1| hypothetical protein HPB128_3g62 [Helicobacter pylori B128]
 gi|298356069|emb|CBI66941.1| lysyl-tRNA synthetase, class II [Helicobacter pylori B8]
          Length = 501

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMKGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + GI+V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRLLAYLL--EQGIKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|119616025|gb|EAW95619.1| lysyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
          Length = 441

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 54  LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 113

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 114 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 169

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +         + 
Sbjct: 170 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDV 229

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + E   +   + L  T     +  R +L        +      T + +  
Sbjct: 230 DFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 289

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 290 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 347

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 348 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 407

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 408 IKEVLLFPAMKPEDKK 423


>gi|126663329|ref|ZP_01734327.1| lysyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126624987|gb|EAZ95677.1| lysyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 565

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 103/377 (27%), Positives = 172/377 (45%), Gaps = 37/377 (9%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR R              +KR  + +++R +F E 
Sbjct: 136 LKPLPLPKTDEEGHVFDAFTDPELRYRMRYVDLVVNPQVKEVFMKRTKLFTAMRTFFNEA 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ  PG     R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 196 GYMEVETPVLQSIPGGAA-ARPFITH---HNSLDIPLYMRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVN 158
           F+  +RN      H PEFT +E Y A++ Y  +M+   N++   A         +F    
Sbjct: 252 FSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMEMTENLLEYCANQVNGTTEATFGEHK 311

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N  +    +T+ +A  ++   D+    ++        L+  A+  GI V        + 
Sbjct: 312 VNFKAPYARVTMTDAIKQFTGFDITGKTESE-------LFEAAKYMGIEVNDTMGKGKLI 364

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L+  +  +P  T+RFEL  C  E+ NA  EL
Sbjct: 365 DEIFGEKCEGN--FIQPTFITDYPKEMSPLSKSHRDNPELTERFELMVCGKEIANAYSEL 422

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DPI+QR RFE +M   +K  +E    IDEDFL  L   MP +SG+ +G DRL+M +T  
Sbjct: 423 NDPIDQRERFEAQMALAEKGDDEANGIIDEDFLRALEYGMPPTSGLGIGMDRLIMFLTNN 482

Query: 337 NNINEVIWTPFSQSNQE 353
            +I EV++ P  +  ++
Sbjct: 483 ASIQEVLFFPQMRPEKK 499


>gi|126441810|ref|YP_001059617.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|166229800|sp|A3NB96|SYK_BURP6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|126221303|gb|ABN84809.1| lysine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 508

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 152/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  +  F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR  A +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIRYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIQKYA-----PNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAEAQLWEPTFIVDYPIEVSPLARESDTVAGITERFELFVTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|237741501|ref|ZP_04571982.1| lysyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229429149|gb|EEO39361.1| lysyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 493

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 154/366 (42%), Gaps = 28/366 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R              +KR  I  ++R+Y  +  F+E+++  
Sbjct: 139 RSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRDTFIKRTKIIKAIRKYLDDRGFLEVETPI 198

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     + F T     + +   LYL+ +PE   KKL+  G E+++     +RN  
Sbjct: 199 MHPILGGAA-AKPFITH---HNTLNIDLYLRIAPELYLKKLIVGGFERVYDLNRNFRNEG 254

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y+AH  +  +M  C  II    +  N       +           +
Sbjct: 255 ISTRHNPEFTMVELYQAHADFHDMMDLCEGIISSVCQEVNGTTDIEYDGVKLSLKNFARV 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIE 227
            + +       +D    +              A++  I VA        I +    +K E
Sbjct: 315 HMVDMIKEVTGVDFWKEMT------FEEAKQIAKEHHIEVADHMNSVGHIINEFFEQKCE 368

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P FT RFEL+    E  NA  EL DP +QR R
Sbjct: 369 EK--VIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKREYANAFTELNDPADQRGR 426

Query: 288 FEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE +++E      E  P IDE F+  L   +P + G+ +G DRLVML+TGA +I +VI  
Sbjct: 427 FESQVEEAMHGNEEATPEIDESFVEALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PQMKPR 492


>gi|254184374|ref|ZP_04890964.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184214905|gb|EDU11948.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 508

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 152/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  +  F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR  A +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIRYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIQKYA-----PNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETSEAQLWEPTFIIDYPIEVSPLARESDTVAGITERFELFVTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|157373980|ref|YP_001472580.1| lysyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189082971|sp|A8FRH9|SYK_SHESH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157316354|gb|ABV35452.1| lysyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 500

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 86/367 (23%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + V+ +F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDQETRYRQRYIDLIVNEESREAFIMRSKVVSAIRNFMVKKEFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MMHTIPGGAS-ARPFETH---HNALDIAMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A          +     +      
Sbjct: 255 GLSPRHNPEFTMMEFYMAYSDYKDLMDLTEEMLSSIATELCGSPKLPYGEHVVDFGGPYA 314

Query: 167 YITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A  +Y   +    ++   +  D   +   A+  G+ +    T   +   I  E 
Sbjct: 315 RLSMLDAIKKYNPDNATIQSMTYEEVKDVEFMRNLAKSLGMTIEKFWTCGQLLEEIFGET 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +   T RFE +    E+ N   EL D  +Q 
Sbjct: 375 AETQ--LMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVANGFSELNDAEDQD 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +RF+ ++  K    +E    D D++  L   +P ++G  +G DRLVML T  + I +VI 
Sbjct: 433 NRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVIL 492

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 493 FPAMRPQ 499


>gi|328956582|ref|YP_004373968.1| lysine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328672906|gb|AEB28952.1| lysine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 499

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 165/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R               KR+ I   +R Y  E  ++E+++ 
Sbjct: 146 LRPLPDKYHGLTNVEQRYRQRYLDLISNRESFDRFTKRSQIIREVRNYLNEQDYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 206 TLHNLAGGAA-ARPFITH---HNALDMELYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +E +M     +IR  A+ V      ++     +  S  +
Sbjct: 262 GVDTTHNPEFTMLEAYTAYTDFEDVMDLVEGLIRTVAQRVLGTGQITYNGQAIDLESSWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +A   ++ +D    + N            A++  + V     +  + +    + +
Sbjct: 322 RQHMVDAIKEHSGVDFWQHMTN------EEARALAKEHDVPVTEHSQFGHVVNEFFEKFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFE +    E  NA  EL DPI+QR 
Sbjct: 376 EDK--LIQPTFIYGHPLEISPLAKKNTEDPRFTDRFEAFIVGHEYGNAFSELNDPIDQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E+    +E + IDEDF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFESQMKERALGNDEAHMIDEDFIESLEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 493

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 494 PTMRNQ 499


>gi|242011230|ref|XP_002426358.1| predicted protein [Pediculus humanus corporis]
 gi|212510435|gb|EEB13620.1| predicted protein [Pediculus humanus corporis]
          Length = 571

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 159/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R R                R  I S +R +  E  F+EI++ 
Sbjct: 194 LHMLPHLHYGLKDKETRFRMRYLDCILNDYVRQKFFIRAQIISYIRRFLDELGFLEIETP 253

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  + F+T     + +   LYL+ +PE   K L+  G ++++     +RN 
Sbjct: 254 IMNMIAGGAS-AKPFTT---YHNELNMSLYLRVAPELYHKMLVVGGIDRVYEIGRQFRNE 309

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--------NC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 310 GIDLTHNPEFTTCEFYMAYADYNDLMEITEKLLSGMVKTIFGSYKIKYHPKGPDDEEVEI 369

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I +  A      + L    D        +L     +  +      T + +  
Sbjct: 370 DFTPPFKRIYMIPALEEELKVKLPKPQDFGSPEANKVLKDLCAKFQVECPPPTTSARLLD 429

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 430 KLVGEFLEEKC--INPTFICDHPQVMSPLAKWHRSTPGLTERFELFIMKKEVCNAYTELN 487

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++ ++K    +E   IDE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 488 DPLVQRERFEEQAKDKAAGDDEAQLIDENFCTALEYGLPPTGGWGMGIDRLTMFLTDSNN 547

Query: 339 INEVIWTPFSQSNQEE 354
           I EV++ P  +   ++
Sbjct: 548 IKEVLFFPAMKPEDQK 563


>gi|315586182|gb|ADU40563.1| lysine--tRNA ligase [Helicobacter pylori 35A]
          Length = 501

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFETEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + GI+V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SRDILEKEDRLLAYLL--EQGIKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|153853504|ref|ZP_01994884.1| hypothetical protein DORLON_00873 [Dorea longicatena DSM 13814]
 gi|149753659|gb|EDM63590.1| hypothetical protein DORLON_00873 [Dorea longicatena DSM 13814]
          Length = 610

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R +     F+E+++ 
Sbjct: 109 LQILPEKFHGLTDTDTRYRQRYVDLIMNPESKETFIKRSKILKEIRNFLDGRGFMEVETP 168

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 169 MLVSNAGGAA-ARPFETHY---NALNEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 224

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+   ++ R  A +V    + S+     +     E
Sbjct: 225 GVDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGSAVISYNGTVIDMAKPFE 284

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ +A  +YA +D        +          A +  +         DI +    E  
Sbjct: 285 RISMIDAVKKYAGVDFS------EVKTDEEAKALADKHHVEYEERHKKGDILNLFFDEFC 338

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E  +     T +  +P   S L    P DP + +RFELY    E+CNA  EL DPI+QR 
Sbjct: 339 EEKM--IQPTFVTDHPIEISPLTKKNPEDPNYVERFELYVYGREMCNAYSELNDPIDQRE 396

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +       E    DEDFL  L   MP + GI  G DRLVML+T A  I +V+  
Sbjct: 397 RFAAQEEAFAAGDEEANHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDAQAIRDVLLF 456

Query: 346 PFSQS 350
           P  +S
Sbjct: 457 PTMKS 461


>gi|317012028|gb|ADU82636.1| lysyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 501

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YRRR               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRRRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + G++V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRLLAYLL--EQGVKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|169836741|ref|ZP_02869929.1| lysyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 494

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 165/371 (44%), Gaps = 29/371 (7%)

Query: 2   HQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +       +  YR+R             + KR  +    R Y  +  F E+++  
Sbjct: 136 RPLPEKFHGLTNVETRYRQRYVDLVMNREVMETMKKRFQVIRFFRSYLEKKGFTEVETPM 195

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G  T  R F T     + +   L+L+ +PE   K+LL  G EK+F    ++RN  
Sbjct: 196 MHPIAGGAT-ARPFVTH---HNALDMELFLRIAPELYLKRLLVGGFEKVFEINRSFRNEG 251

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPEY 167
               H PEFTM+E Y+A+  +  +M    ++I       + K    +++   N       
Sbjct: 252 ISVKHNPEFTMMELYQAYADFNDMMDLTEDLISSLTFELHGKYEIEYEDKTINLAKPWRR 311

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD--IFSRILIEK 225
           +T+ EA       D  +   + +  ++      A++ GI +  D T++   I +    EK
Sbjct: 312 VTMKEAVKEATGFDFDSISSDEEAIEK------AKEFGIPLEKDKTYTKFGILNLFFEEK 365

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S L+     +  +  RFEL+    E  NA  EL DP +Q+
Sbjct: 366 VEET--LINPTFITEYPKEISPLSKNQKGETEWVDRFELFISGREFANAYSELNDPRDQK 423

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE++++ K+   +E   +D D++  L   MP + G+ +G DRLVML T + +I +VI 
Sbjct: 424 ERFEEQVKLKEAGDDEAQGMDLDYIRALEYGMPPAGGLGIGIDRLVMLQTNSASIRDVIL 483

Query: 345 TPFSQSNQEEI 355
            P  +    E+
Sbjct: 484 FPTLRKEDIEL 494


>gi|34763426|ref|ZP_00144374.1| Lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886895|gb|EAA24019.1| Lysyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 493

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 154/366 (42%), Gaps = 28/366 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R              +KR  I  ++R+Y  +  F+E+++  
Sbjct: 139 RSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRDTFIKRTKIIKAIRKYLDDRGFLEVETPI 198

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     + F T     + +   LYL+ +PE   KKL+  G E+++     +RN  
Sbjct: 199 MHPILGGAA-AKPFITH---HNTLNIDLYLRIAPELYLKKLIVGGFERVYDLNRNFRNEG 254

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y+AH  +  +M  C  II    +  N       +           +
Sbjct: 255 ISTRHNPEFTMVELYQAHADFHDMMDLCEGIISSVCKEVNGTTDIEYDGVKLSLKNFARV 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIE 227
            + +       +D    +              A++  I VA        I +    +K E
Sbjct: 315 HMVDMIKEVTGVDFWKEMT------FEEAKQIAKEHHIEVADHMNSVGHIINEFFEQKCE 368

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P FT RFEL+    E  NA  EL DP +QR R
Sbjct: 369 EK--VIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKREYANAFTELNDPADQRGR 426

Query: 288 FEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE +++E      E  P IDE F+  L   +P + G+ +G DRLVML+TGA +I +VI  
Sbjct: 427 FESQVEEAMHGNEEATPEIDESFVEALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PQMKPR 492


>gi|167013425|pdb|3BJU|A Chain A, Crystal Structure Of Tetrameric Form Of Human Lysyl-Trna
           Synthetase
 gi|167013426|pdb|3BJU|B Chain B, Crystal Structure Of Tetrameric Form Of Human Lysyl-Trna
           Synthetase
 gi|167013427|pdb|3BJU|C Chain C, Crystal Structure Of Tetrameric Form Of Human Lysyl-Trna
           Synthetase
 gi|167013428|pdb|3BJU|D Chain D, Crystal Structure Of Tetrameric Form Of Human Lysyl-Trna
           Synthetase
          Length = 521

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 142 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 202 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +         + 
Sbjct: 258 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDV 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I + E   +   + L  T     +  R +L        +      T + +  
Sbjct: 318 DFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD 377

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 378 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 435

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 436 DPMRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 495

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 496 IKEVLLFPAMKPEDKK 511


>gi|254778896|ref|YP_003057001.1| lysyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254000807|emb|CAX28731.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Helicobacter
           pylori B38]
          Length = 501

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + GI+V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRLLAYLL--EQGIKVEPNLTYGKLLAEAFDHFVEHK 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|323485862|ref|ZP_08091197.1| lysyl-tRNA synthetase [Clostridium symbiosum WAL-14163]
 gi|323400850|gb|EGA93213.1| lysyl-tRNA synthetase [Clostridium symbiosum WAL-14163]
          Length = 654

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 158/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I   +R +     F+E+++ 
Sbjct: 147 LQILPEKFHGLTNTDMRYRQRYVDLIMNPEVRDTFVKRSRIIKEVRNFLDGRGFMEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F+T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 207 MLVPNAGGAA-ARPFTTHY---NALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M+    + R  A+         +  V  +     E
Sbjct: 263 GVDTRHNPEFTLMELYQAYTDYYGMMELVETMFREVAKKVLGTAKLIYDGVEIDLEKPFE 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y  ID      +            A Q  I         DI S +  E +
Sbjct: 323 RITMVDALKKYKGIDFTQIKTD------EEAKALADQYHIEYEARHKKGDILSMLFEEFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFEL+    E+ NA  EL DP++Q  
Sbjct: 377 EEH--LVQPTFILDHPIEISPLTKKKPENPDYTERFELFITKREMANAYSELNDPLDQIE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +         E   +DEDF+  L   MP + GI +G DR +ML+T +  I +V+  
Sbjct: 435 RFKAQEALLAAGDEEANSMDEDFVNALMVGMPPTGGIGIGMDRFIMLLTDSYAIRDVLLF 494

Query: 346 PFSQS 350
           P  ++
Sbjct: 495 PTMKT 499


>gi|76811249|ref|YP_334110.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|167895042|ref|ZP_02482444.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167919677|ref|ZP_02506768.1| lysyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|254260252|ref|ZP_04951306.1| lysine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254297039|ref|ZP_04964492.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|123598607|sp|Q3JQP3|SYK_BURP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|76580702|gb|ABA50177.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|157807694|gb|EDO84864.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254218941|gb|EET08325.1| lysine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 508

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 152/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  +  F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR  A +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIRYQGRELDLAKPFR 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIQKYA-----PNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAEAQLWEPTFIIDYPIEVSPLARESDTVAGITERFELFVTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|41582254|gb|AAS07872.1| lysyl-tRNA synthetase [uncultured marine bacterium 580]
          Length = 480

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              L R+ I S++R +  E++F+E+++ 
Sbjct: 126 IRPLPEKFHGLSDQETKYRQRYVDLIVNEDTKKTFLNRSKIISNMRAFMEEHEFLEVETP 185

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  T  R F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 186 MLHPIPGGAT-ARPFETH---HNALDMDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 241

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM    + IR     +       +Q+   +     E
Sbjct: 242 GLSVRHNPEFTMMEFYAAYTEYKWLMNFTEDCIRDVTKRILGTLKVKYQDKIIDFEKPFE 301

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y+     +        D   +     + G  + +          +   + 
Sbjct: 302 RLTLVEAIMKYS-----SQFSESQLNDIDFIKSHLSKNGENLPNSSGLGAYQLVLFELEA 356

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +   T+RFEL+    E+ N   EL D  +Q  
Sbjct: 357 EAK--LWDPTYIIDYPTEVSPLARASDTNNAITERFELFIAGREIANGFSELNDAEDQAK 414

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K     E    D DF+  L   +P + G  +G DRLVML+T + +I +VI  
Sbjct: 415 RFQMQVAAKDAGDEEAMYYDADFVRALEYGLPPTGGCGVGIDRLVMLLTDSPSIRDVILF 474

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 475 PHMRAE 480


>gi|53723795|ref|YP_103320.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67642992|ref|ZP_00441742.1| lysine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121601586|ref|YP_993519.1| lysyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385926|ref|YP_001029052.1| lysyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126449902|ref|YP_001081027.1| lysyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126453655|ref|YP_001066898.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134277392|ref|ZP_01764107.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167000660|ref|ZP_02266471.1| lysine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167846463|ref|ZP_02471971.1| lysyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|217420502|ref|ZP_03452007.1| lysine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|226195488|ref|ZP_03791076.1| lysine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|242314267|ref|ZP_04813283.1| lysine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254178151|ref|ZP_04884806.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254191407|ref|ZP_04897911.1| lysyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254195944|ref|ZP_04902370.1| lysyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254200277|ref|ZP_04906643.1| lysyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254209353|ref|ZP_04915699.1| lysyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254357975|ref|ZP_04974248.1| lysyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81604733|sp|Q62IZ9|SYK_BURMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229796|sp|A3ML91|SYK_BURM7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229797|sp|A2SAT3|SYK_BURM9 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229798|sp|A1V5L6|SYK_BURMS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229799|sp|A3NX27|SYK_BURP0 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52427218|gb|AAU47811.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121230396|gb|ABM52914.1| lysyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293946|gb|ABN03215.1| lysine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126227297|gb|ABN90837.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126242772|gb|ABO05865.1| lysine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|134251042|gb|EBA51121.1| lysyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|147749873|gb|EDK56947.1| lysyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147750126|gb|EDK57197.1| lysyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148027102|gb|EDK85123.1| lysyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|157939079|gb|EDO94749.1| lysyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160699190|gb|EDP89160.1| lysyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169652689|gb|EDS85382.1| lysyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|217395914|gb|EEC35931.1| lysine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|225932448|gb|EEH28447.1| lysine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|238524227|gb|EEP87661.1| lysine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242137506|gb|EES23908.1| lysine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243063467|gb|EES45653.1| lysine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 508

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 152/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  +  F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR  A +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIRYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIQKYA-----PNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAEAQLWEPTFIIDYPIEVSPLARESDTVAGITERFELFVTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|301300314|ref|ZP_07206521.1| lysine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852087|gb|EFK79764.1| lysine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 495

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 161/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R              + R+ I  ++R Y   N F+E+++ 
Sbjct: 142 LRPLPDKFHGLQNVEQIYRQRYLDLITNRESYNRFVNRSKIVIAVRNYLDSNGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 202 VLHNQAGGAA-ARPFITH---HNALDIQLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  ++ +M +   I + AA+V       ++Q  + +   E +
Sbjct: 258 GIDTKHNPEFTMLETYAAYFDFKDVMDETEGIFKAAAKVVTSDGKINYQGTDVDFNKEFK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A +  +          I +    +  
Sbjct: 318 RVHMVDLIKEKTGVDFWKEMS------LEEARKIADEHKVHYEPYWQVGHIINEFFEQFC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EDT--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFELFILGNEYANAFTELNDPIDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E++   +E   IDED++  +   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 430 RFEAQVAERQAGNDEAEGIDEDYIEAMEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 489

Query: 346 PFSQSN 351
           P  +  
Sbjct: 490 PTLRPE 495


>gi|260174123|ref|ZP_05760535.1| lysyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315922390|ref|ZP_07918630.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696265|gb|EFS33100.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 575

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 92/360 (25%), Positives = 150/360 (41%), Gaps = 27/360 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              LKR  +  +LR    E  + E+++  LQ   G 
Sbjct: 157 DSFEDPELRYRQRYVDLVVNDGIKETFLKRATVVKTLRNALDEAGYTEVETPILQSIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AS-ARPFITH---HNSLDMDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS-EPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++       N    +  +     F      + + +A 
Sbjct: 273 EFTCMELYVQYKDYNWMMNFTEKLLERICIAVNGSTETVVDGKTINFKAPYRRLPILDAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEKIEPNLGIN 233
                 DL          +   +    ++  +  +        +   I  E  E      
Sbjct: 333 KEKTGYDLNG-------KNEEEIRQVCKELKMEEIDETMGKGKLIDEIFGEFCEGTY--I 383

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DP++Q  RF+++M+
Sbjct: 384 QPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPLDQEERFKEQMR 443

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   I EV++ P  +  +
Sbjct: 444 LADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFPQMRPEK 503


>gi|323526608|ref|YP_004228761.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323383610|gb|ADX55701.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 508

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 158/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R    SS+R++  +  F+E+++ 
Sbjct: 149 LRPLPDKFHGLSDQEMKYRQRYVDLIVTPETRKTFVARTKAISSIRKFMADAGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F+T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFTTH---HNALDMQMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     +IR AA +       ++Q    +      
Sbjct: 265 GVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         N    D   L  + ++ G+  +     +     + +   
Sbjct: 325 RLTITQAIQKYA-----PQYTNEQLADSAFLRTELKKFGVDASQPQFLNAGVGSLQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAESQLWEPTYIIDYPVEVSPLARASDKVAGITERFELFITGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++ +K     E    D D++  L   MP + G  +G DRLVM++T + +I +VI
Sbjct: 440 AARFKKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMMLTDSPSIRDVI 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|33601276|ref|NP_888836.1| lysyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|39932139|sp|Q7WK46|SYK_BORBR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33575711|emb|CAE32789.1| lysyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 506

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+     +R+  +   F+E+++ 
Sbjct: 147 LRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKAVGGIRQTMLNAGFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 207 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    ++IR AA  A    + S+Q+   +     +
Sbjct: 263 GVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAVLSYQDRELDLSQPFD 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +YA              D   +  + ++ G  V            + +   
Sbjct: 323 RLTICEAILKYA-----EGYTQAQLDDPAFVRAELRKLGANVEGPPLARAGLGALQLALF 377

Query: 227 EPNLG--INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E      +   T +  YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 378 EETAEAKLWRPTYIIDYPVEVSPLARASDTRDGITERFELFITGREIANGFSELNDPEDQ 437

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  +++ K     E    D D++  L   MP + G  +G DRLVML+T + +I +VI
Sbjct: 438 AERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVI 497

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 498 LFPHLRRE 505


>gi|46198987|ref|YP_004654.1| lysyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55981010|ref|YP_144307.1| lysyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|730872|sp|P41255|SYK_THETH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81364188|sp|Q5SJG7|SYK_THET8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|81405966|sp|Q72JT9|SYK_THET2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1072959|pir||A55589 lysine-tRNA ligase (EC 6.1.1.6) - Thermus aquaticus
 gi|486665|emb|CAA50039.1| lysine--tRNA ligase [Thermus thermophilus]
 gi|46196611|gb|AAS81027.1| lysyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55772423|dbj|BAD70864.1| lysyl-tRNA synthetase (lysine--tRNA ligase) (LysRS) [Thermus
           thermophilus HB8]
          Length = 492

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 160/370 (43%), Gaps = 29/370 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +     +++  YR+R               +R+ I   +R +F    F+E+++ 
Sbjct: 133 LHPLPDKWHGLRDKEVRYRQRYLDLIVNPEVREVFRRRSEIVRYIRRFFEAKGFLEVETP 192

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + +    YL+ S E   K+LL  G EK+F     +RN 
Sbjct: 193 ILQPTTGGA-EARPFKT---YHNALDHEFYLRISLELYLKRLLVGGYEKVFEIGRNFRNE 248

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ +      ++      +       +Q    N      
Sbjct: 249 GIDHNHNPEFTMLEAYWAYADYQDMAGLVEELLSGLVLHLFGSHEVPYQGRVLNFKPPFR 308

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I+  EA    A +         D  D   L L A      ++    +  +  ++    +
Sbjct: 309 RISFVEALKEKAGLPF-------DPLDLERLRLWADAHHPELSQVPNY-KLLDKLFGIYV 360

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  +P   S LA  +   P   +R++LYA  +EL     EL DP++QR 
Sbjct: 361 EPE--LQDPTFVFDFPLAISPLAKRHREKPGLVERWDLYAGGMELAPCYSELNDPLDQRE 418

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ + +K+   E    DEDFL  L   MP ++G+ +G DRL ML+T   ++ +V+  
Sbjct: 419 RFLEQARRRKEGDEEAPEPDEDFLLALEYGMPPAAGLGLGIDRLAMLLTDQPSLRDVLLF 478

Query: 346 PFSQSNQEEI 355
           P  +  +E +
Sbjct: 479 PLLKPKKEAV 488


>gi|124003298|ref|ZP_01688148.1| lysyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123991396|gb|EAY30827.1| lysyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 582

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 92/360 (25%), Positives = 160/360 (44%), Gaps = 26/360 (7%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
           + + +  YR+R              +KR  + +++R+Y  +  ++E+++  LQ   G   
Sbjct: 168 FTDPELRYRQRYVDLVVNPQVRDTFIKRTKLVNTMRDYLNDKGYLEVETPILQPLYGGAA 227

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LYL+ + E   K+L+  G + ++ F+  +RN      H PEF
Sbjct: 228 -ARPFKTH---HNTLDMTLYLRIANELYLKRLIVGGFDGVYEFSKDFRNEGMSRFHNPEF 283

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           T +E Y A++ YE +M     ++   A                N     +  T+ EA   
Sbjct: 284 TQVELYVAYKDYEWMMNLVEEMVEKVAIALHGTTEVQVGANTINFQRPWKRYTMFEAIEH 343

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +  ID+          +   L    ++  +          +   I  EK E    +   T
Sbjct: 344 FTGIDISEM-------NEDQLRETCKKLDVETDPSMGKGKLIDEIFGEKCE--GSLIQPT 394

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            +  YP   S LA  +   P   +RFE  A   E+CNA  EL DP++QR RFE ++   K
Sbjct: 395 FITNYPVEMSPLAKSHRDKPGLVERFEAIANGKEICNAFSELNDPLDQRQRFEDQVNLGK 454

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
           +  +E   +DEDFL  L   MP ++G+ +G DRL M++T ++ I EV++ P  +  ++ +
Sbjct: 455 RGDDEAMTLDEDFLRALEYGMPPTAGLGIGIDRLSMIMTNSSTIQEVLFFPQMRPEKQPV 514


>gi|241896599|ref|ZP_04783895.1| lysyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870080|gb|EER73831.1| lysyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 494

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 156/364 (42%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR+ I S++R Y   + F E+++ 
Sbjct: 143 LRPLPDKFHGLTDIETKYRQRYLDLIANDDSFDRFQKRSKIISAIRAYMDGDGFTEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + +   LY++ + E   K+L+  G E+++     +RN 
Sbjct: 203 MLQNAAGGAA-ARPFITH---HNALNIDLYMRIALELHLKRLIVGGMERVYEIGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPE 166
                H PEFT++E Y A      +M +  NI + AA+V    +  ++Q    +      
Sbjct: 259 GMDPKHNPEFTVMESYAAFWDLGDVMTETENIFKAAAKVVADDMIITYQEHTIDLAKPFA 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +       +D        +          A + G++         I +      +
Sbjct: 319 RKHMVDLIKEKTGVDFWQDYTVEE------ARAIADEKGVKYEQYWGVGHIINEFFENFV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RF +RFEL+    E  NA  EL DPI+QR 
Sbjct: 373 EDT--LIEPTFVYGHPVEVSPLAKKSDDDKRFAQRFELFISGGEYANAFTELNDPIDQRE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  E+    +E   IDEDF+  L   MP + G+ +G DRLVML+T A+ I +V+  
Sbjct: 431 RFEAQAAERAAGNDEAEGIDEDFIESLEYGMPPTGGLGIGIDRLVMLLTNADTIRDVLLF 490

Query: 346 PFSQ 349
           P  +
Sbjct: 491 PTMR 494


>gi|194334315|ref|YP_002016175.1| lysyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194312133|gb|ACF46528.1| lysyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 514

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 101/377 (26%), Positives = 172/377 (45%), Gaps = 39/377 (10%)

Query: 1   MHQIPSQP-------------WWNRDFHYRRRPF-----------LLKRNMIQSSLREYF 36
           +  IP                + +++  YR+R              +KR+ I + +R +F
Sbjct: 151 LRPIPVAKEKEVDGQKVTYDAFSDKELRYRQRYVDLIVNPEVRNTFVKRSAIVTFMRTFF 210

Query: 37  VENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
            E  ++E+++  LQ   G     R F+T     + +   LYL+ + E   K+L+  G + 
Sbjct: 211 SEKGYLEVETPILQPVYGGAA-ARPFTTH---HNALDMELYLRIANELYLKRLIVGGFDG 266

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQ 155
           +F FA  +RN      H PEFT +E Y A++ Y  +M+    +I R    V N +  +F 
Sbjct: 267 VFEFAKDFRNEGIDRFHNPEFTQVELYVAYKDYYWMMELVEQLIYRANLAVNNSENTTFL 326

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
           +   +       +++A+A  +Y + D+              L   A+  G+ +    +  
Sbjct: 327 DNEISLKPPFTRLSIADAIMQYCDRDISG-------KSESELRNIAKDLGLELDPKISSG 379

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            I   I  E +EP   +   T +  YP   S LA  + +     +RFEL     ELCN+ 
Sbjct: 380 KIIDEIFGEFVEPK--LIQPTFIMDYPTEMSPLAKEHRSKEGVVERFELIVGGKELCNSF 437

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP+ QR+R E++ + + +  +E   +DEDFL  L   MP  +G+ +G DRLVML+ 
Sbjct: 438 SELNDPVIQRNRLEEQAKLRLRGDDEAMVVDEDFLRALEYGMPPCAGLGIGIDRLVMLLC 497

Query: 335 GANNINEVIWTPFSQSN 351
           G  +I +VI+ P  +  
Sbjct: 498 GEESIRDVIFFPHLKPE 514


>gi|317179988|dbj|BAJ57774.1| lysyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 501

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 165/366 (45%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I                L     + GI+V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGISKNV------LEKEDRLLAYLLEQGIKVEPNLTYGKLLAEAFDHFVEHK 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|307729219|ref|YP_003906443.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307583754|gb|ADN57152.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 508

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R    SS+R++  +  F+E+++ 
Sbjct: 149 LRPLPDKFHGLSDQEMKYRQRYVDLIVTPETRKTFVARTKAISSIRKFMADAGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F+T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFTTH---HNALDMQMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     +IR AA +       ++Q    +      
Sbjct: 265 GVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLSKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+  +     +     + +   
Sbjct: 325 RLTITQAIQKYA-----PQYTDEQLADSAFLRSELKKFGVDASQPQFLNAGVGSLQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAESQLWEPTYIIDYPVEVSPLARASDKVEGITERFELFITGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++ +K     E    D D++  L   MP + G  +G DRLVM++T + +I +VI
Sbjct: 440 AARFKKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMMLTDSPSIRDVI 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|308502742|ref|XP_003113555.1| CRE-KARS-1 protein [Caenorhabditis remanei]
 gi|308263514|gb|EFP07467.1| CRE-KARS-1 protein [Caenorhabditis remanei]
          Length = 596

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 88/374 (23%), Positives = 159/374 (42%), Gaps = 29/374 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R+ I + LR Y     F+E+++ 
Sbjct: 213 LHMLPHSHFGLKDKELRFRKRYLDLILNPRIKDNFVIRSKIITFLRRYLDNLGFLEVETP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K L+  G ++++     +RN 
Sbjct: 273 IMNQIAGGAT-AKPFITH---HNDLDMNLFLRVAPELYHKMLVVGGIDRVYEVGRLFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y A+  YE +++   +++               +           
Sbjct: 329 GIDLTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVLAIKGTYKIEYHPNGANTEPVYE 388

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +     + + + +  A    + L        +  R +     +   +  +   T + + 
Sbjct: 389 VDFTPPFKRVHMYDGLAEKLGVKLPDPSTLDTEEARQVFDKLCRDNEVDCSAPRTTARLL 448

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++ E +E        T L  +P   S LA  + + P  T+RFEL+A   E+ NA  EL
Sbjct: 449 DKLVGEYLEST--FISPTFLIGHPQIMSPLAKWHRSIPGLTERFELFAVTREIANAYTEL 506

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI QR RFE++ ++K    +E   IDE F   L   +P + G  MG DRL M++T  N
Sbjct: 507 NDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEYGLPPTGGWGMGIDRLSMILTDNN 566

Query: 338 NINEVIWTPFSQSN 351
           NI EV+  P  +  
Sbjct: 567 NIKEVLLFPAMRPE 580


>gi|149927858|ref|ZP_01916109.1| lysyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823480|gb|EDM82711.1| lysyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 510

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 163/369 (44%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   SS+R +  ++ F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQEIKYRQRYVDLIVSEETRSTFVARSRAMSSVRNFMADHGFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  +  + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MLHPIPGGAS-AKPFITH---HNALDMEMYLRIAPELYLKRLIVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y  LM     +I+ AA         ++Q  + +      
Sbjct: 266 GVSPRHNPEFTMMEFYAAYWNYRDLMDFTEQVIQHAATTATGSAKLTYQGRDLDLSKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI-FSRILIEK 225
            +T+ EA  +Y            D  +   L     + G+ V  +    ++    + +  
Sbjct: 326 RLTIVEAIQKY-----FPEYGTEDLQNIDYLKKALAKKGVHVDKEPALKNVGIGALQLAL 380

Query: 226 IEPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
            E               YP   S LA    A+ + T+RFEL+    E+ N   EL DP +
Sbjct: 381 FEETSESLLWEPTFIVDYPVEVSPLARASDANSQITERFELFITGREIANGFSELNDPED 440

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q  RF+K+++ K+   +E    D DF+  L   MP + G  +G DRL+ML+T + NI +V
Sbjct: 441 QADRFKKQVEAKEAGDDEAMFFDADFIRALEYGMPPTGGCGIGIDRLMMLITDSPNIRDV 500

Query: 343 IWTPFSQSN 351
           I  P  +  
Sbjct: 501 ILFPHLRRE 509


>gi|237813010|ref|YP_002897461.1| lysine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|237504206|gb|ACQ96524.1| lysine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 508

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 152/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  +  F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDADFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR  A +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIRYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIQKYA-----PNYTDGQLSDDAFLRGELKRLGVDVTQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAEAQLWEPTFIIDYPIEVSPLARESDTVAGITERFELFVTGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFRKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|91784240|ref|YP_559446.1| lysyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|122970323|sp|Q13WZ5|SYK_BURXL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|91688194|gb|ABE31394.1| Lysyl-tRNA synthetase, class-2 [Burkholderia xenovorans LB400]
          Length = 513

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 157/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R    SS+R++  +  F+E+++ 
Sbjct: 154 LRPLPDKFHGLSDQEMKYRQRYVDLIVTPETRKTFVARTKAISSIRKFMADADFMEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F+T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 214 MLHPIPGGAA-AKPFTTH---HNALDMQMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     +IR AA +       ++Q    +      
Sbjct: 270 GVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLAKPFH 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         N    D   L  + ++ G+  +     +     + +   
Sbjct: 330 RLTITQAIQKYA-----PQYTNEQLADSAFLRTELKKFGVDASQPQFLNAGVGALQLALF 384

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 385 EETAESQLWEPTYIIDYPIEVSPLARASDKVEGITERFELFITGREIANGFSELNDPEDQ 444

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++ +K     E    D D++  L   MP + G  +G DRLVML+T + +I +VI
Sbjct: 445 AARFRKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMLLTDSPSIRDVI 504

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 505 LFPHLRRE 512


>gi|315037519|ref|YP_004031087.1| lysyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312275652|gb|ADQ58292.1| lysyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|327182815|gb|AEA31262.1| lysyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 516

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 161/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEAIYRQRYLDLITNRDSYMRFVHRTQIIQAIRDYLNGQNFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  Y  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GLDTHHNPEFTELESYAAYWDYHDVMDEAEGIIRAAAKVVSDDGKITYQGTDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +   +          A+   I V        I +    +  
Sbjct: 318 RVHMVDLIKEKTGVDFWKPMTLEEAT------KIAEDHDIHVEKFWKVGHIINAFFEKYC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 372 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E++   +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEAQMEEREAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPERVE 498


>gi|237720034|ref|ZP_04550515.1| lysyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|299147908|ref|ZP_07040971.1| lysine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|229450586|gb|EEO56377.1| lysyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|295084792|emb|CBK66315.1| Lysyl-tRNA synthetase (class II) [Bacteroides xylanisolvens XB1A]
 gi|298514091|gb|EFI37977.1| lysine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 575

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 27/360 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              LKR  +  +LR    E  + E+++  LQ   G 
Sbjct: 157 DSFEDPELRYRQRYVDLVVNDGIKETFLKRATVVKTLRNALDEAGYTEVETPILQSIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AS-ARPFITH---HNSLDMDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS-EPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++       N    +  +     F      + + +A 
Sbjct: 273 EFTCMELYVQYKDYNWMMNFTEKLLERICIAVNGSTETVVDGKTINFKAPYRRLPILDAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEKIEPNLGIN 233
                 DL              +    ++  +  +        +   I  E  E      
Sbjct: 333 KEKTGYDLNG-------KSEEEIRQVCKELKMEEIDETMGKGKLIDEIFGEFCEGTY--I 383

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DP++Q  RF+++M+
Sbjct: 384 QPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPLDQEERFKEQMR 443

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   I EV++ P  +  +
Sbjct: 444 LADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFPQMRPEK 503


>gi|293373876|ref|ZP_06620218.1| lysine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292631097|gb|EFF49733.1| lysine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 575

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 27/360 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              LKR  +  +LR    E  + E+++  LQ   G 
Sbjct: 157 DSFEDPELRYRQRYVDLVVNDGIKETFLKRATVVKTLRNALDEAGYTEVETPILQSIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AS-ARPFITH---HNSLDMDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS-EPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++       N    +  +     F      + + +A 
Sbjct: 273 EFTCMELYVQYKDYNWMMNFTEKLLERICIAVNGSTETVVDGKTINFKAPYRRLPILDAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEKIEPNLGIN 233
                 DL              +    ++  +  +        +   I  E  E      
Sbjct: 333 KEKTGYDLNG-------KSEEEIRQVCKELKMEEIDETMGKGKLIDEIFGEFCEGTY--I 383

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DP++Q  RF+++M+
Sbjct: 384 QPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPLDQEERFKEQMR 443

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   I EV++ P  +  +
Sbjct: 444 LADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFPQMRPEK 503


>gi|317010462|gb|ADU84209.1| lysyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 501

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I                L     + G++V  + T   + +      +E  
Sbjct: 317 YLDALETIGGI------SKEILEKEDKLLAYLLEQGVKVESNLTHGKLLAEAFGHFVEHK 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LIHPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 SQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|237745072|ref|ZP_04575553.1| lysyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|260494850|ref|ZP_05814980.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|229432301|gb|EEO42513.1| lysyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|260198012|gb|EEW95529.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 493

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 154/366 (42%), Gaps = 28/366 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R              +KR  I   +R+Y  E  F+E+++  
Sbjct: 139 RSLPEKYHGLTDVEIRYRKRYIDLIMNPEVRDIFIKRTEIIKEIRKYLDERGFLEVETPM 198

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     R F T     + +   LYL+ + E   K+L+  G +K++     +RN  
Sbjct: 199 MHQILGGAA-ARPFITH---HNALNLDLYLRIAVELYLKRLIVGGFDKVYEMGKDFRNEG 254

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y+AH  +  +M     +I    E  N       +         + +
Sbjct: 255 ISVRHNPEFTMIELYQAHADFNDMMDIAEGMISTICEKINGTTDIVYDGVQLSLKNFKRV 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIE 227
            + +       +D    +              A++  + +A        I +    +K E
Sbjct: 315 HMVDMIKDVTGVDFWKEMT------FEEAKQLAKEHHVEIAPHMNSVGHIINEFFEQKCE 368

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P FT RFEL+    E  NA  EL DP +QR R
Sbjct: 369 EK--VIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKREYANAFTELNDPADQRGR 426

Query: 288 FEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE +++E  +   E  P IDED++  L   MP + G+ +G DRLVML+TG+ +I +VI  
Sbjct: 427 FEAQVEEALRGNEEATPVIDEDYVEALEYGMPPTGGMGIGIDRLVMLLTGSPSIRDVILF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PQMKPR 492


>gi|332638688|ref|ZP_08417551.1| lysyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 494

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 161/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR+ I +++R Y     FIE+++ 
Sbjct: 143 LRPLPDKFHGLTDVETKYRQRYLDLISNEDSFERFVKRSKIITAIRHYLDGEGFIEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  +  R F T     + +   LY++ + E   K+L+  G E+++     +RN 
Sbjct: 203 MLQNEAGGAS-ARPFITH---HNALDIDLYMRIALELHLKRLIVGGMERVYEIGRVFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT++E Y A+ ++E +M +  NII+ AA         ++Q  + +      
Sbjct: 259 GMDPKHNPEFTVIETYAAYWNFEDVMVETENIIKAAAAAVTDDLKVTYQGHDIDLAQPFA 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +       +D    +   +          A   G++         I +    E +
Sbjct: 319 RKHMVDLIKETTGVDFWQPMTIEE------ARAIADDKGVKYEQYWGVGHIINEFFEEFV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 373 EDT--LIQPTFVYGHPVEVSPLAKKNETDDRFTDRFELFIVGAEYGNAFTELNDPIDQRE 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E+    +E   IDEDF+  L   MP + G+ +G DRLVML+T  + I +V+  
Sbjct: 431 RFEAQVAERDAGNDEAEGIDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDTDTIRDVLLF 490

Query: 346 PFSQ 349
           P  +
Sbjct: 491 PTMR 494


>gi|307636873|gb|ADN79323.1| lysyl t-rna synthetase:classII [Helicobacter pylori 908]
 gi|325995462|gb|ADZ50867.1| Lysyl-tRNA synthetase (class II) [Helicobacter pylori 2018]
 gi|325997060|gb|ADZ49268.1| Lysyl-tRNA synthetase class II [Helicobacter pylori 2017]
          Length = 501

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I  G             L     + G++V  + T   + +      +E  
Sbjct: 317 YLDALETIGGISKGI------LEKEDRLLAYLLERGVKVEPNLTHGKLLAEAFDHFVEHK 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTEYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|33592239|ref|NP_879883.1| lysyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|39932123|sp|Q7VZ37|SYK_BORPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33571884|emb|CAE41400.1| lysyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332381656|gb|AEE66503.1| lysyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 506

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+     +R+  +   F+E+++ 
Sbjct: 147 LRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKAVGGIRQAMLNAGFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 207 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    ++IR AA  A    + S+Q+   +     +
Sbjct: 263 GVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAVLSYQDRELDLSQPFD 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +YA              D   +  + ++ G  V            + +   
Sbjct: 323 RLTICEAILKYA-----EGYTQAQLDDPAFVRAELRKLGANVEGPPLARAGLGALQLALF 377

Query: 227 EPNLG--INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E      +   T +  YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 378 EETAEAKLWRPTYIIDYPVEVSPLARASDTRDGITERFELFITGREIANGFSELNDPEDQ 437

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  +++ K     E    D D++  L   MP + G  +G DRLVML+T + +I +VI
Sbjct: 438 AERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVI 497

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 498 LFPHLRRE 505


>gi|256844836|ref|ZP_05550294.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294785883|ref|ZP_06751171.1| lysine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|256718395|gb|EEU31950.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294487597|gb|EFG34959.1| lysine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 493

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 154/366 (42%), Gaps = 28/366 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R              +KR  I  ++R+Y  +  F+E+++  
Sbjct: 139 RSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRDTFIKRTKIVKAIRKYLDDRGFLEVETPI 198

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     + F T     + +   LYL+ +PE   KKL+  G E+++     +RN  
Sbjct: 199 MHPILGGAA-AKPFITH---HNTLNIDLYLRIAPELYLKKLIVGGFERVYDLNRNFRNEG 254

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y+AH  +  +M  C  II    +  N       +           +
Sbjct: 255 ISTRHNPEFTMVELYQAHADFHDMMDLCEGIISSVCQEVNGTTDIEYDGVKLSLKNFARV 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIE 227
            + +       +D    +              A++  I VA        I +    +K E
Sbjct: 315 HMVDMIKEVTGVDFWKEMT------FEEAKQIAKEHHIEVADHMNSVGHIINEFFEQKCE 368

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P FT RFEL+    E  NA  EL DP +QR R
Sbjct: 369 EK--VIQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKREYANAFTELNDPADQRGR 426

Query: 288 FEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE +++E      E  P IDE F+  L   +P + G+ +G DRLVML+TGA +I +VI  
Sbjct: 427 FESQVEEAMHGNEEATPEIDESFVEALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVILF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PQMKPR 492


>gi|83644617|ref|YP_433052.1| lysyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123726432|sp|Q2SL47|SYK_HAHCH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|83632660|gb|ABC28627.1| lysyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 507

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 156/378 (41%), Gaps = 36/378 (9%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R                R+ +  S+R +  +  FIE ++ 
Sbjct: 141 LRPLPDKHKGLTNTEMRYRQRYLDLITNEEARETFRIRSKVIESIRYFLTKRDFIEAETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  R F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 201 MLQVIPGGAT-ARPFVT---YHNALDIEMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------- 158
                H PEFTM+E+Y+A   Y+ LM     ++R  A+ A                    
Sbjct: 257 GLSTRHNPEFTMIEFYQAFADYKDLMNLTEEMLRWVAQEALGTTEVRNTSKNTDGDVVDE 316

Query: 159 --CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              +       +TV E+   +        L   D  +       A   GI +        
Sbjct: 317 IIYDFGKPFIRMTVVESILHF-----NPELTLGDIDNMDGAKKVATGLGIPLKASWGLGK 371

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           I   I  + +E    +   T +  YP   S LA     +P  T RFE +    E+ N   
Sbjct: 372 IQIEIFEKTVEHR--LMQPTFITEYPTEVSPLARRNDDNPFVTDRFEFFVGGREIANGFS 429

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL DP +Q  RF K++ EK+   +E    DED++  L   MP ++G  +G DRLVML+T 
Sbjct: 430 ELNDPEDQAERFRKQVAEKEAGDDEAMFFDEDYITALEHGMPPTAGEGIGIDRLVMLLTD 489

Query: 336 ANNINEVIWTPFSQSNQE 353
           + +I +VI  P  +   +
Sbjct: 490 SPSIRDVILFPHMRPLAD 507


>gi|315453704|ref|YP_004073974.1| lysyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132756|emb|CBY83384.1| lysyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 496

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 90/366 (24%), Positives = 156/366 (42%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R                R+ I + +R +F +  F+E+++  +
Sbjct: 140 PLPEKFHGLSDIELRYRQRYVDLIANPEVKEVFKTRSQIVAIIRRFFEQKGFLEVETPMM 199

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 200 HPIAGGA-NARPFIT---YHNALEVERYLRIAPELYLKRLVVGGFEAVFEINRNFRNEGM 255

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTMLE+Y A+++YE L+     +     +  N         +   FS    + 
Sbjct: 256 DHSHNPEFTMLEFYWAYKTYEDLIALTKELFEELLQALNLPTQITYQEHTIDFSAIRVLG 315

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      ++           +  LL    ++ G+++    T   + +      +E  
Sbjct: 316 FKQALIEIGGLENSIV------ENSALLQAFLEKQGVKLEGLITHGKLLAEAFDLCVESK 369

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  YP   S LA     DP    RFEL+    E+ N   EL DP++Q  RFE
Sbjct: 370 --LINPTFITEYPIEISPLARRNDTDPNIADRFELFIAGKEIANGFSELNDPLDQYQRFE 427

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++++ K+    E   +D D++  L   MP ++G  +G DRLVML+T +  I +VI  P  
Sbjct: 428 EQVRAKESGDEEAQFMDSDYVWALGHGMPPTAGEGIGIDRLVMLLTNSKTIKDVILFPAM 487

Query: 349 QSNQEE 354
           +   ++
Sbjct: 488 KPENKD 493


>gi|120609891|ref|YP_969569.1| lysyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|120588355|gb|ABM31795.1| lysyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 518

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 167/368 (45%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   S +RE+ V++ F+E+++ 
Sbjct: 161 LRPMPDKFHGVADQEVKYRQRYVDLMTDEAARRRFIARSKAVSGIREFMVQHGFLEVETP 220

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 221 MLHPIPGGA-NAKPFVTH---HNALEQEMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 276

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y  LM     ++R AA + A     ++Q    +     E
Sbjct: 277 GISVRHNPEFTMMEFYAAYWNYRDLMDFTEQLVRDAATKAAGSLQLTYQGRAVDLSQPFE 336

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  R+   D G  +D     D   L    ++ G+    D   +   + + +   
Sbjct: 337 RLTIREAILRHT--DAGDGVD-----DAAWLVAALRKLGLSEEKDRLSTRSLAGLQVLYF 389

Query: 227 EPNLGI--NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E  +       T +  +P   S LA      P  T+RFELY    E  N   EL D  +Q
Sbjct: 390 EETVEDKLWQPTFIMEHPTEISPLARANDTRPEVTERFELYITGREFGNGFSELNDAEDQ 449

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+ +++ K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 450 AARFQSQVEAKDSGDDEAMYFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVI 509

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 510 LFPALRRE 517


>gi|160932786|ref|ZP_02080175.1| hypothetical protein CLOLEP_01627 [Clostridium leptum DSM 753]
 gi|156867860|gb|EDO61232.1| hypothetical protein CLOLEP_01627 [Clostridium leptum DSM 753]
          Length = 503

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 102/360 (28%), Positives = 159/360 (44%), Gaps = 26/360 (7%)

Query: 6   SQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +       D  YR+R              +KR+ I  S+RE      FIE+++  L   
Sbjct: 153 DKFHGLTNTDLRYRQRYVDLIVNPEVKDTFIKRSQIIKSIREDLDNLDFIEVETPILNTI 212

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
           PG     R F T     + +   LYL+ +PE   K+L+  G E+++     +RN      
Sbjct: 213 PGGAA-ARPFITH---HNTLDIDLYLRIAPELYLKRLIVGGMERVYEIGRLFRNEGMDVK 268

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYITVA 171
           H PEFT +E Y+A+  Y  +M+   N+I  AA  V   +  S+     +     + +T+ 
Sbjct: 269 HNPEFTTIELYQAYTDYNGMMELTENLIHSAAIKVCGTEEISYGGQPVSLALPFKRVTMI 328

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +A      ID G         D       A++  + +   DTW +I +    EK+E    
Sbjct: 329 DAVKEATGIDFGAFRG-----DTEKAREAAKELRLEIKESDTWGNILNLAFEEKVEDT-- 381

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   T +  YP   S L       P   +RFEL+    E  NA  EL DPI+QR RF ++
Sbjct: 382 LIQPTFVCDYPIEVSPLTKKKKGMPELVERFELFITGREFANAYSELNDPIDQRERFLRQ 441

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              ++   +E   +DEDFL  L   M  + G+ MG DRL ML+T + +I +V+  P  + 
Sbjct: 442 AALREAGDDEANMLDEDFLTALEYGMAPTGGMGMGIDRLAMLLTDSASIRDVLLFPTMKP 501


>gi|317013602|gb|ADU81038.1| lysyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 501

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I  G             L     + GI+V  + T   + +      +E  
Sbjct: 317 YLDALETIGGISKGI------LEKEDRLLAYLLEQGIKVEPNLTHGKLLAEAFDHFVEHK 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTEYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|308182356|ref|YP_003926483.1| lysyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064541|gb|ADO06433.1| lysyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 501

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 166/366 (45%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I  G             L     + G++V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGISKGI------LEKEDRLLAYLLERGVKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|94309979|ref|YP_583189.1| lysyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|123081366|sp|Q1LPK6|SYK_RALME RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|93353831|gb|ABF07920.1| lysine tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 515

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 154/369 (41%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    SS+R +  +  F+E+++ 
Sbjct: 155 LRPLPDKFHGLADQETKYRQRYVDLIVSPETRSTFRARTQAISSIRRHMADAGFMEVETP 214

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++++ +PE   K+L+  G E++F     +RN 
Sbjct: 215 MLHPIPGGAA-AKPFITH---HNALDMQMFMRIAPELYLKRLIVGGFERVFEINRNFRNE 270

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    N+IR AA  A      ++Q    +      
Sbjct: 271 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTENLIRQAAIDARGSATVTYQGRELDLSKPFH 330

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ-QAGIRVAHDDTWSDIFSRILIEK 225
            +T+  A  +YA         +    D   L  + + +  I  +     +     + +  
Sbjct: 331 RLTICGAIQKYA-----PEYTDAQLADADFLRAELKNKFKINTSAPQFLNAGLGTLQLVL 385

Query: 226 IEPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
            E               YP   S LA      P  T+RFEL+    E+ N   EL DP +
Sbjct: 386 FEETAEAQLWEPTYIVDYPVEVSPLARGSDTQPGITERFELFITGREIANGFSELNDPED 445

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q  RF K++++K     E    D D++  L   MP + G  +G DRLVML+T + NI +V
Sbjct: 446 QAERFRKQVEQKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDV 505

Query: 343 IWTPFSQSN 351
           I  P  +  
Sbjct: 506 ILFPHLRRE 514


>gi|291460290|ref|ZP_06599680.1| lysine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417045|gb|EFE90764.1| lysine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 656

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 157/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +     + D  YR+R              +KR+ I   +R +  +  FIE+++ 
Sbjct: 147 LYPLPEKFHGLQDTDVRYRQRYVDLIMNEDSRAVFVKRSRIIHEIRSFLADRDFIEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E++F     +RN 
Sbjct: 207 MLVDNAGGAA-ARPFETHY---NALDEDVKLRISLELYLKRLIIGGLERVFEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M+   ++ R  A +V    + S+Q    +     +
Sbjct: 263 GLDTRHNPEFTLMELYQAYTDYNGMMELTESLFRHIAEKVCGTSLISYQGTEIDLGKPFQ 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA      ID     +  +          A++  I         DI +    E  
Sbjct: 323 RLTMTEAVKEATGIDFDEIKELVE------ARRLAKERNIPFEERHGIGDIENLFFEEFC 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P DP   +RFELY    E+CNA  EL DPI+QR 
Sbjct: 377 EEK--LIQPTFIMDHPVEISPLTKRKPEDPSKVERFELYIYGREMCNAYSELNDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +         E    DEDFL  +   MP + GI  G DRLVML T    I +V+  
Sbjct: 435 RFLAQDALAAAGDEEANHTDEDFLHAMEIGMPPTGGIGYGIDRLVMLFTDTPAIRDVLLF 494

Query: 346 PFSQS 350
           P  +S
Sbjct: 495 PTLKS 499


>gi|261837632|gb|ACX97398.1| lysyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 501

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + GI+V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRLLAYLL--EQGIKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|227903177|ref|ZP_04020982.1| lysyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227868982|gb|EEJ76403.1| lysyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 516

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 97/369 (26%), Positives = 161/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y  +  F+E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEAIYRQRYLDLITNRDSYMRFVHRTQIIQAIRDYLNKQDFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GLDTHHNPEFTELETYAAYWDFHDVMDEAEGIIRAAAKVVSPDGKITYQGTDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    + + +          A++  I          + +    +  
Sbjct: 318 RVHMVDLIKEKTGVDFWKPMTDEE------AKKIAEEHDIHCESYWKVGHVINAFFEKYC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 372 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEAQMAERDAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPERVE 498


>gi|221068672|ref|ZP_03544777.1| lysyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713695|gb|EED69063.1| lysyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 514

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 159/369 (43%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRD----FHYRR---------RPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D       R          R   + R+   + +R++ VE+ F+E+++ 
Sbjct: 157 LRPMPDKFHGMADLEQKVRQRYVDLMTDEEARKRFVARSKAVAGIRDFMVEHGFLEVETP 216

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 217 MLHPIPGGA-NAKPFITH---HNALDQEMYLRIAPELYLKRLIVGGFERVFEINRNFRNE 272

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y+ LM     +IR AA         S+     +     E
Sbjct: 273 GISVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAAIKAVGTLELSYGGKPVDLAKPFE 332

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y            +  +R  L    ++ G++   D   +   + + +   
Sbjct: 333 RLTIPEAIVKYT-------EAGDNVANREWLTNALKKLGMKEDKDKLSTRTLASLQVLYF 385

Query: 227 EP--NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E      +   T +  +P   S LA      P  T+RFELY    E  N   EL D  +Q
Sbjct: 386 EEVVEEKLWNPTFIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELNDAEDQ 445

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  +++ K    +E    D DF+  L   MP + G  +G DR +ML+T + +I +VI
Sbjct: 446 AARFNAQVEAKDGGDDEAMYFDHDFVRALEYGMPPTGGCGIGIDRFMMLLTDSASIRDVI 505

Query: 344 WTPFSQSNQ 352
             P  +  Q
Sbjct: 506 LFPALRREQ 514


>gi|71908461|ref|YP_286048.1| lysyl-tRNA synthetase, class-2 [Dechloromonas aromatica RCB]
 gi|123733161|sp|Q47C53|SYK_DECAR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71848082|gb|AAZ47578.1| Lysyl-tRNA synthetase, class-2 [Dechloromonas aromatica RCB]
          Length = 501

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 159/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I +S+R Y   + F+E+++ 
Sbjct: 148 LRPLPDKFHGLADQEMKYRQRYVDLIMNEETRFTFRARSAIVASIRNYMTGHGFMEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  + F T     + +    +L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 208 MMHPIPGGAS-AKPFVTH---HNALDMQQFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y  LM     ++R AA     +++F +Q    +      
Sbjct: 264 GLSPRHNPEFTMMEFYEAYANYHTLMDFTEGLLRHAAREALGKEVFVYQGRELDLSKPFH 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  R           + +  D   L  + +  G  +        +  ++     
Sbjct: 324 RLTINQAIQR-----QHPEFSDAELADPEFLKAKIKHFGEPLKPG-GLGSLQLQLFEACA 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +      T +  YP   S LA     +P  T+RFEL+    E+ N   EL D  +Q  
Sbjct: 378 EAHC--WEPTFIIDYPVEVSPLARASDTNPEITERFELFIVGREIANGFSELNDAEDQAA 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+++M+ K     E    D DF+  L   +P + G  +G DRL+ML+T A  I +VI  
Sbjct: 436 RFQEQMKAKDAGDEEAMYYDADFIRALEYGLPPTGGCGIGIDRLIMLLTDAAAIRDVILF 495

Query: 346 PFSQSN 351
           P  +  
Sbjct: 496 PSMRPE 501


>gi|208434136|ref|YP_002265802.1| lysyl-tRNA synthetase [Helicobacter pylori G27]
 gi|226710889|sp|B5Z9V6|SYK_HELPG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|208432065|gb|ACI26936.1| lysyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 501

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 166/366 (45%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I  G             L     + G++V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGISRGI------LEKEDRLLAYLLEQGVKVEPNLTYGKLLAEAFDHFVEHK 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|15644811|ref|NP_206981.1| lysyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501017|sp|P56126|SYK_HELPY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|2313270|gb|AAD07251.1| lysyl-tRNA synthetase (lysS) [Helicobacter pylori 26695]
          Length = 501

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + GI+V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRLLAYLL--EQGIKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|332978485|gb|EGK15197.1| lysine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 508

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 168/365 (46%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     + +  YR            R   L R+ + S +R++ +  +F+E+++ 
Sbjct: 152 LRPMPNKFHGLADTEARYRNRHLDLMTNEDSRNTFLIRSKVISGIRKFMLNERFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 212 MMHPIPGGAV-ARPFITH---HNALDMPLYLRIAPELYLKRLVVGGFERVFEINRSFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     +    A ++      ++Q+ N +  +   
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMDLTERLFNELATDILGTTELTYQDENISFKAPFA 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ-AGIRVAHDDTWSDIFSRILIEK 225
            +++ +A A+YA+       D     DR  L   AQ     +V        + + I  E 
Sbjct: 328 RLSMKDAIAQYAD-----NFDMSKIDDRDYLADYAQNVLKQQVKEGFGIGKLQTIIFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +P  T RFEL+    E+ N   EL DP +Q 
Sbjct: 383 AEHK--LRQPTFITEYPAETSPLARRNDENPEITDRFELFIGGREIANGFSELNDPADQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  ++ EK    +E    D D++  L   +P ++G  +G DRLVML T A +I +VI 
Sbjct: 441 ERFHNQVAEKDAGDDEAMHFDADYIEALSYGLPPTAGEGIGIDRLVMLFTDAASIRDVIL 500

Query: 345 TPFSQ 349
            P  +
Sbjct: 501 FPHMR 505


>gi|254497461|ref|ZP_05110254.1| lysine tRNA synthetase, heat inducible [Legionella drancourtii
           LLAP12]
 gi|254353276|gb|EET12018.1| lysine tRNA synthetase, heat inducible [Legionella drancourtii
           LLAP12]
          Length = 497

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 90/364 (24%), Positives = 154/364 (42%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD-------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D              +   R   L R+ +  + R++  +NQF+E+++ 
Sbjct: 144 LRPLPDKFHGLADQEVKYRKRYVDLIANEDSRTTFLIRSRLIQAFRQFMDKNQFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 204 MMHPIPGGAV-ARPFITH---HNSLDMTMYLRIAPELYLKRLVVGGFERVYEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM     +++   +V    +   +Q  + +      
Sbjct: 260 GISTRHNPEFTMVEFYQAYADYNDLMTFTEQLLQYLCDVVLGTRQVEYQGQSIDFNQPFT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV EA   Y        +         +     Q+ G      D    +   +  E +
Sbjct: 320 RMTVKEAILHY-----HPQISAQQLESVAVCRQILQEKGFAFKETDGLGKLQMILFEETV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    +DP  T RFE +    E+ N   EL D  +Q  
Sbjct: 375 EHQ--LFQPTFITAYPTEISPLARRSDSDPEVTDRFEFFIAGREIANGFSELNDAEDQAE 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++EK     E    D D++  L   +P ++G  +G DRLVML T + +I +VI  
Sbjct: 433 RFRKQVEEKDAGDLEAMHYDSDYIEALEYGLPPTAGEGIGIDRLVMLFTNSQSIRDVILF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PHLR 496


>gi|254491641|ref|ZP_05104820.1| lysyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224463119|gb|EEF79389.1| lysyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 497

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R  I   +R + ++  ++E+++ 
Sbjct: 143 LRPLPEKFHGLSDQETRYRQRYVDLIMNEASRETFRLRTKIIDGVRRFLMDKGYLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F+T     + +   L+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 203 MMQAIPGGAT-ARPFTT---YHNSLDMDLFLRIAPELYLKRLIVGGFERVFEINRNFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  + +LM     ++R   + V       +Q ++ +      
Sbjct: 259 GLSTRHNPEFTMVEFYQAYADHHELMDLTEAMLRTVTQDVLGTSKVHYQGLDIDFAQPFT 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV E+   +        +              A    I V        +   I  + +
Sbjct: 319 RMTVTESILHF-----NPDIKAEQLNTLEAAREIAASLEIPVKDSYGLGKVQIEIFEKTV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFE +    E+ N   EL D  +Q  
Sbjct: 374 EHR--LMDPTFITAYPTEVSPLARRSDNDPFVTDRFEFFVGGREIANGFSELNDAEDQAE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +++EK    +E    D D++  L   MP ++G  +G DRLVML+T + +I +V+  
Sbjct: 432 RFQAQVEEKDAGDDEAMHYDADYIRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PHMRPE 497


>gi|156398116|ref|XP_001638035.1| predicted protein [Nematostella vectensis]
 gi|156225152|gb|EDO45972.1| predicted protein [Nematostella vectensis]
          Length = 569

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 85/380 (22%), Positives = 164/380 (43%), Gaps = 32/380 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R  I + +R +  +  F+E+++ 
Sbjct: 182 LHMLPHLHFGLKDKETRFRQRYLDLILNDKVRDKFVTRARIINCIRRFLDQLGFLEVETP 241

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 242 LMNMIPGGAT-AKPFITH---HNDLNMDLFMRVAPELYHKMLVVGGIDRVYEIGRQFRNE 297

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN----------- 156
                H PEFT  E+Y A+  Y  LM+    +I    +          +           
Sbjct: 298 SIDLTHNPEFTTCEFYMAYADYNDLMEITETMISGMVKNITGGYKVTYHPEAVDADNLGK 357

Query: 157 -VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
               +     + + +     +   + L +  D        LL     +  +  A   T +
Sbjct: 358 SWTVDFTPPFKRLRMIPELEKVLGVRLPSPQDFNTPEANKLLDQLCVKHEVDCAPPRTTA 417

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            +  +++ E +E        T +  +P   S L+  +  +   T+RFEL+ C  E+CNA 
Sbjct: 418 RLLDKLVGEFLESQCVS--PTFIIDHPEIMSPLSKWHRKEKGLTERFELFVCCKEICNAY 475

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP+ QR RFE++ ++K    +E   +DE+F   L   +P ++G  +G DRL M +T
Sbjct: 476 TELNDPMVQRERFEQQAKDKAAGDDEAMFVDENFCTSLEFGLPPTAGWGLGVDRLTMFLT 535

Query: 335 GANNINEVIWTPFSQSNQEE 354
            +NNI EV++ P  +  + +
Sbjct: 536 DSNNIKEVLFFPAMKPEENQ 555


>gi|39939075|ref|NP_950841.1| lysyl-tRNA synthetase class II [Onion yellows phytoplasma OY-M]
 gi|81402297|sp|Q6YPY6|SYK_ONYPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|39722184|dbj|BAD04674.1| lysyl-tRNA synthetase class II [Onion yellows phytoplasma OY-M]
          Length = 511

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 157/367 (42%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWWNRDF-------------HYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    ++              + + R   L R++I   +R +F    F+E+++ 
Sbjct: 140 LKPLPDKFHGLQNREEMRKNRYVDLIVNEKTRQVFLTRSLIMKYIRNFFDNQGFLEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G  +  + F T     + +    YL+ + E   KKL+  G  K++     +RN 
Sbjct: 200 ILQPTLGGAS-AKPFITH---HNALNCDFYLRIATELPLKKLIVGGMNKVYEIGRLFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEF+ +E Y A+   + +M      ++  A+    K+          FS    
Sbjct: 256 GIDATHNPEFSTIEAYLAYADMQDIMDLTKQCLQELAQKLFGKLQFTYQNQEIDFSHFAK 315

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +++  +      ID        D          A++  I V    +   I      + +E
Sbjct: 316 VSMVASIKEKTGID------FTDNFTLEQCLSLAKKHQIEVMPHFSQGHIIEAFFGKYVE 369

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA    ADPRFT RFEL+    E  NA  EL DPIEQ  R
Sbjct: 370 NT--LIQPTFVYGHPLEISPLAKQNEADPRFTDRFELFIVGKEFANAFSELNDPIEQEKR 427

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++Q+K+   +E   +D DFL  L   MP + G+ MG DRLVML+T   NI +VI  P
Sbjct: 428 FLNQLQQKQLGNDEANDMDYDFLNALNYGMPPTGGLGMGLDRLVMLLTDTANIRDVILFP 487

Query: 347 FSQSNQE 353
             ++  +
Sbjct: 488 HCKNQNK 494


>gi|269217201|ref|ZP_06161055.1| lysine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129338|gb|EEZ60423.1| lysine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 509

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 99/368 (26%), Positives = 160/368 (43%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR  I S++R Y     F E+++ 
Sbjct: 154 LRPLPEKFHGLSDKEIRYRQRYVDLVMNQDVRDTFVKRFAIVSAIRRYMESQGFFEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + R F T     + +    YL+ + E   K+LL  G E++F     +RN 
Sbjct: 214 MLQPIMGGA-NARPFVTH---HNALDMDFYLRIATELPLKRLLVGGLERVFEIGRIFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A    E +M     +I+ AA+         +Q    +      
Sbjct: 270 GMDPYHNPEFTTIEAYQAFSDLEGMMDLTRGMIQAAAQAACGTLQVEYQGRAIDLSGTWT 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ +  + YA  ++G      D      L   A++ G  +        + S I    +
Sbjct: 330 TRTMCDLASEYAGEEVGMDRSWED------LAAIARRGGASIEASWGKGKLISEIFEAFV 383

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P +P FT RFEL+ C  E  NA +EL DPI+Q  
Sbjct: 384 EDK--LVQPTFVTEHPLEISPLAKKLPDNPEFTYRFELFICGHEYANAFNELNDPIDQEE 441

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +M+ K    +E    D D++  L   MP + G+ +G DRLVML+T +  I +V+  
Sbjct: 442 RFAAQMEAKAGGDDEAMEYDSDYIRALEYGMPPAGGVGVGIDRLVMLLTDSETIRDVLLF 501

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 502 PHMRPEAK 509


>gi|89900573|ref|YP_523044.1| lysyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89345310|gb|ABD69513.1| lysyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 520

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 91/372 (24%), Positives = 162/372 (43%), Gaps = 25/372 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+   S +RE+ V + F+E+++ 
Sbjct: 152 LRPMPDKFHGMNDQETKYRQRYVDLMMDETARARFTARSKAVSGIREFMVAHDFLEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F+T     + + + ++L+ +PE   K+L+  G E++F    ++RN 
Sbjct: 212 MLHPIPGGA-NAKPFTTH---HNALDQQMFLRIAPELYLKRLIVGGFERVFEINRSFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     +IR AA+        S+     +     E
Sbjct: 268 GISVRHNPEFTMMEFYAAYWDYQDLMTFTEKLIRDAAQKAVGTLELSYGGRAVDLTQPFE 327

Query: 167 YITVAEAFARYAN----IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
            +T+ EA  ++      ++           +   L    ++ G+        +   + + 
Sbjct: 328 RLTIHEAICKFTEAGQELEGANLDGCLKVDNAAWLISALRKLGLTEGKHKLSTRSLASLQ 387

Query: 223 IEKIEPNLG--INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +   E  +   +   T +  +P   S LA      P  T+RFELY    E  N   EL D
Sbjct: 388 VLYFEETVEEKLWQPTFICEHPVEISPLARASDHKPGVTERFELYITGREFGNGFSELND 447

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
             EQ  RF  ++  K    +E    D DF+  L   MP + G  +G DRL+ML+T +++I
Sbjct: 448 AEEQASRFHAQVAAKDDGDDEAMYYDHDFIRALEYGMPPTGGCGVGLDRLMMLLTDSSSI 507

Query: 340 NEVIWTPFSQSN 351
            +VI  P  +  
Sbjct: 508 RDVILFPALRHE 519


>gi|332663266|ref|YP_004446054.1| Lysyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332332080|gb|AEE49181.1| Lysyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 510

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 94/383 (24%), Positives = 160/383 (41%), Gaps = 42/383 (10%)

Query: 1   MHQIP---------------SQPWWNRDFHYRRRPF-----------LLKRNMIQSSLRE 34
           +  +P                  + + +  +R R              + R+ I S++R 
Sbjct: 141 LRPLPMVKTRVIEATGETEVYDAFTDPEQRHRMRYVDLTVNPQFKAAFITRSRIISAMRR 200

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +F +  ++E+++  LQ   G     R F T     + +  PLY++ + E   K+L+A G 
Sbjct: 201 FFDDKGWLEVETPILQPIHGGAA-ARPFQTH---HNTLDMPLYMRIANELYLKRLIAGGF 256

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI--F 152
           + ++     +RN      H PEFT +E Y A++ Y  +M+     +   A   N      
Sbjct: 257 DGVYEIGKMFRNEGMDRTHNPEFTAMEIYVAYKDYYWMMEMVEQCLEHIARAINDNNPLI 316

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
            F     N       +T+ ++   Y   D+          D   L    +Q  I + +  
Sbjct: 317 KFDQHEINYAGPYRRLTMYDSIKEYTGADISEM-------DEAQLRDLCKQLHIEIDNSM 369

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
               +   I   K+E N  +   T +  YP   S LA  + +     +RFEL+    E+ 
Sbjct: 370 GRGKLIDEIFGAKVEKN--LIQPTYIIDYPVEMSPLAKKHRSKAGLVERFELFVNGKEIA 427

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
           NA  EL DPI+QR R E ++    +  +E   +DEDFL  L   MP +SG+ +G DRL M
Sbjct: 428 NAYSELNDPIDQRERLEDQLTLAARGDHEAMAMDEDFLRALEYGMPPTSGLGIGIDRLTM 487

Query: 332 LVTGANNINEVIWTPFSQSNQEE 354
            +T  + I EV++ P  +  + E
Sbjct: 488 FMTNNHTIQEVLFFPQMRPEKGE 510


>gi|325955983|ref|YP_004286593.1| lysyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325332548|gb|ADZ06456.1| lysyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 515

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 161/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEAIYRQRYLDLITNRDSYMRFVHRTQIIQAIRDYLNGQNFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  Y  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GLDTHHNPEFTELESYAAYWDYHDVMDEAEGIIRAAAKVVSDDGKITYQGTDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +   +          A+   I V        I +    +  
Sbjct: 318 RVHMVDLIKEKTGVDFWKPMTLEEAT------KIAEDHDIHVEKFWKVGHIINAFFEKYC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 372 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M+E++   +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEAQMEEREAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPERVE 498


>gi|119947031|ref|YP_944711.1| lysyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|259511530|sp|A1T047|SYK_PSYIN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|119865635|gb|ABM05112.1| lysyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 509

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 166/368 (45%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              L RN I +++R+Y  +  F+E+++ 
Sbjct: 153 LRPLPDKFHGLSDTEACYRQRYLDLIANDNSRKTFLLRNKIVNAIRQYLNDRDFMEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +  P+YL+ +PE + K+L+  G E++F    ++RN 
Sbjct: 213 MLQSIPGGAA-AKPFET---YHNALSLPMYLRIAPELNLKRLVVGGFERVFEINRSFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM     ++R  A  V    I ++ +   +  +   
Sbjct: 269 GVSTRHNPEFTMIEFYQAYADYIDLMNLTEEMLRSIAENVLGSSIVNYGDQVFDFGAAFI 328

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E+  +Y        ++  +      L   A +  + +  +     + + I  E  
Sbjct: 329 RMTMKESVLQY-----NEGIEASELESMASLKALAARFNVNIKENWGEGKVLTEIFEETT 383

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     DP  T RFE +    EL N   EL D  +Q  
Sbjct: 384 EHK--LLQPTFITAYPAEVSPLARRNDQDPSVTDRFEFFVGGRELANGFSELNDSQDQAE 441

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++ +K+   +E    D D++  L   +P ++G  +G DRLVML T ++ I +V+  
Sbjct: 442 RFMDQVAQKESGDDEAMFYDADYITALEHGLPPTAGEGIGIDRLVMLFTDSHTIRDVLLF 501

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 502 PHMRPQAK 509


>gi|260220768|emb|CBA28663.1| Lysyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 592

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 162/368 (44%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   S+LRE+ V + F+E+++ 
Sbjct: 235 LRPMPDKFHGMADQETKYRQRYVDLMTDVESRKRFVARSKAVSALREFMVSHNFLEVETP 294

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + ++L+ +PE   K+L+  G +++F    ++RN 
Sbjct: 295 MLHPIPGGA-NAKPFKTH---HNALDQEMFLRIAPELYLKRLIVGGFDRVFEINRSYRNE 350

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y+ LM     +IR AA         S+     +     E
Sbjct: 351 GISVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAARKATGGLQLSYAGKPVDLEQPFE 410

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y +          +  D   L    ++ G+  A +       + + +   
Sbjct: 411 RLTIVEAIQKYTD-------AGDNVFDATWLTNAVKKLGLTEAKNRLEGRSLASLQVLYF 463

Query: 227 EPNLGINCCT--ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E  +         +  +P   S LA      P  T+RFELY    E  N   EL D  +Q
Sbjct: 464 EETVEEKLWNPTFIMEHPTEISPLARANDDRPEVTERFELYITGREFGNGFSELNDAEDQ 523

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+ ++  K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 524 AARFQAQVAAKDSGDDEAMHFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSASIRDVI 583

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 584 LFPALRRE 591


>gi|322792670|gb|EFZ16544.1| hypothetical protein SINV_10183 [Solenopsis invicta]
          Length = 584

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 85/373 (22%), Positives = 158/373 (42%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R                R  I + +R++     F+E+++ 
Sbjct: 197 LHMLPHLYFGLKDKETRFRQRYLDLILNDKVRQIFHIRAKIIAYMRKFLDNMGFLEVETP 256

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 257 MMNMIAGGAI-AKPFVTH---HNELNMDLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 312

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+   +++    +  +       +           
Sbjct: 313 GIDLTHNPEFTTCEFYMAYADYNDLMEITESMVSGMVKAIHGTYKIEYHPDGPEGKAYEI 372

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ +       + L              L    ++  I      T + +  
Sbjct: 373 DFTPPFRRISMMKTLEEVVQVKLPDADQLNTPTANKFLSDLCEKHEIECPPPRTSARLLD 432

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + ++   T+RFEL+    E+CNA  EL 
Sbjct: 433 KLVGEFIEDTC--INPTYIIDHPQVMSPLAKWHRSEKGLTERFELFVMKKEICNAYTELN 490

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI QR RFE++ ++K     E   +DE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 491 DPIIQRERFEQQAKDKAAGDEEAQLVDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 550

Query: 339 INEVIWTPFSQSN 351
           I EV++ P  + +
Sbjct: 551 IKEVLFFPQMKPD 563


>gi|261839046|gb|ACX98811.1| lysyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 501

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFETEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + GI+V  + T+  + +       E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRLLAYLL--EQGIKVEPNLTYGKLLAEAFDHFAEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|224372928|ref|YP_002607300.1| lysyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223590008|gb|ACM93744.1| lysyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 502

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 168/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +    +D    YR+R              L R+ I S +RE+F+++ F+E+++ 
Sbjct: 139 IHPLPEKFHGLQDVETRYRQRYLDMIMNKDVRDTFLLRSKIVSLVREFFLKHGFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   + L+ +PE   K+L+  G E +F     +RN 
Sbjct: 199 MLHTVVGGA-NARPFMTH---HNALDIDMNLRIAPELFLKRLIVGGFEAVFELNRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E+Y A+ + E LMK    +     E  N             F     
Sbjct: 255 GIDHTHNPEFTMIEFYWAYHTKEDLMKLTKELFDYLFEKLNLPKKLQYGDMVIDFDNWTT 314

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEKI 226
           IT  ++  +  N+            D + +    +  G+ +    D+   +++ +  E +
Sbjct: 315 ITYRDSLIKIGNV------PEEILEDVNAMKKYLKDHGVELEEHIDSKGKLWAELFDEFV 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P   +RFEL+    E+ N  +EL DP++Q  
Sbjct: 369 ESK--LIDPTFVTDFPIEISPLARRSDENPEIAERFELFIAGREIANGFNELNDPLDQYE 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +++ K K   E   +DED++  L   MP ++G  +G DRLVML+T +++I +VI  
Sbjct: 427 RFKAQLEAKAKGDEEGMEMDEDYIRALQYGMPPTAGEGIGIDRLVMLLTNSHSIKDVILF 486

Query: 346 PFSQSNQE 353
           P  +  +E
Sbjct: 487 PTMKPKKE 494


>gi|188526988|ref|YP_001909675.1| lysyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|238691889|sp|B2US13|SYK_HELPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|188143228|gb|ACD47645.1| lysyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|308061473|gb|ADO03361.1| lysyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 501

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFETEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL  Q   I+V  D T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRLLAYLLEQS--IKVEPDLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|332994016|gb|AEF04071.1| lysyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 518

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 157/379 (41%), Gaps = 35/379 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I + +R Y  +  F+E+++ 
Sbjct: 139 LRPLPEKFHGLSDQETKYRQRYVDLITSEQTRKTFMIRSKIVNGIRNYLTQRDFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MLQVIPGGAT-AKPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------- 158
                H PEFTMLE+Y+A+  +  LM    +++R  AE                      
Sbjct: 255 GLSTRHNPEFTMLEFYQAYADFNDLMNLTEDMLRTLAEDILGSSIITNTTKDTDGNVVSE 314

Query: 159 --CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDT 213
              +     E +++  A  +Y        + +P+  +   L   A+Q  I+         
Sbjct: 315 VQYDFGKPFERLSMGNAILKYWPEANEAAIRDPE-ANLDALKAMAKQLHIKEPEVDGIWG 373

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
                  I     E    +   T +  YP   S LA     +P  T RFE +    EL N
Sbjct: 374 AGKYLCEIFEATAEEK--LEQPTFITEYPWEVSPLARRNDENPFITDRFEFFVGGRELAN 431

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              EL D  +Q  RF K+++EK    +E    DED++  L   +P ++G  +G DRL ML
Sbjct: 432 GFSELNDSEDQAKRFSKQVEEKDAGDDEAMHYDEDYIRALEYGLPPTAGEGIGIDRLAML 491

Query: 333 VTGANNINEVIWTPFSQSN 351
            T +  I +VI  P  +  
Sbjct: 492 FTDSPTIKDVILFPHMKPE 510


>gi|108562604|ref|YP_626920.1| lysyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373851|sp|Q1CUX6|SYK_HELPH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|107836377|gb|ABF84246.1| lysyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 501

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + GI+V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRLLAYLL--EQGIKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|297379407|gb|ADI34294.1| lysyl-tRNA synthetase [Helicobacter pylori v225d]
 gi|308063046|gb|ADO04933.1| lysyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 501

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + GI+V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRLLAYLL--EQGIKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|237751829|ref|ZP_04582309.1| lysyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373195|gb|EEO23586.1| lysyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 506

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 95/362 (26%), Positives = 154/362 (42%), Gaps = 26/362 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R                R+ I S +R++F    F+E+++  L
Sbjct: 143 PLPEKFHGLSDIELRYRQRYLDLIVNREVKETFRMRSAIVSCVRKFFENKGFLEVETPML 202

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 203 HPIPGGA-NARPFITH---HNALDVERYLRIAPELYLKRLVVGGFEAVFEINRNFRNEGI 258

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEF+M+E+Y A+ +Y  L+     +     +  N             F++   +T
Sbjct: 259 DHSHNPEFSMIEFYWAYHTYHDLITLTKELFDYLLDSLNLPKQLPFGDMLIDFTQFSVMT 318

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             E+ A+  NID           DR  L+   +Q  I++    +   + S      +E  
Sbjct: 319 YRESLAKIGNIDKDII------EDRDKLHAFLKQNNIKIEEGLSHDKLLSEAFDNFVESK 372

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  YP   S LA           RFE +    EL N   EL DP++Q  RF 
Sbjct: 373 --LINPTFITEYPIEISPLARRNDTHSNIADRFEFFIGGRELANGFSELNDPLDQLERFR 430

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+T   +I +V+  P  
Sbjct: 431 AQVAEKEKGDEEAQYMDEDYVWALGHGMPPTAGEGIGIDRLVMLLTNNKSIKDVLLFPAM 490

Query: 349 QS 350
           + 
Sbjct: 491 KP 492


>gi|289522352|ref|ZP_06439206.1| lysine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504188|gb|EFD25352.1| lysine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 503

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 161/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR  I  + RE    +  +E+++ 
Sbjct: 151 LRPLPEKWHGLKDTEVRYRQRYLDLIANPEVREVFRKRAKIIKTFREVLESHGTLEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F T     + +   LYL+ + E   K+L+    E+++     +RN 
Sbjct: 211 MLSPIAGGAT-ARPFIT---FHNALGINLYLRIATELYLKRLIVGMYERVYEIGKNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
               +H PEFT +E Y A+ +Y+ +M     II   A+    +   +     N       
Sbjct: 267 GIDSMHNPEFTAMEVYWAYANYDDMMNLTEEIIVACADAMGSRQLPYGEHMINYEPPFRR 326

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            T+ +    +  +D     D             A++ G+ +  +++   I +      +E
Sbjct: 327 ATMVDLVKEHCGVDFLNITD-------EEARRIAKERGLEIKGNESRLLIMTEFFDNFVE 379

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA   P +P FT+RFEL+ C  E+ NA  EL DP++QR R
Sbjct: 380 DK--LIQPTFVLGYPVEISPLAKRDPDNPDFTRRFELFICGAEVANAFSELNDPLDQRER 437

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++++++    E +  DEDF+  L   +P + G+ +G DRL M +T +++I +VI  P
Sbjct: 438 FLDQLKKREAGDEEAHVFDEDFVTALEHGLPPTGGLGIGIDRLTMFLTNSSSIRDVILFP 497

Query: 347 FSQSNQ 352
             +  +
Sbjct: 498 TMRPKE 503


>gi|210134383|ref|YP_002300822.1| lysyl-tRNA synthetase [Helicobacter pylori P12]
 gi|226710888|sp|B6JPT1|SYK_HELP2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|210132351|gb|ACJ07342.1| lysyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 501

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + G++V  + T+  + +      +E  
Sbjct: 317 YLDALETIGGI----SRDILEKEDRLLAYLL--EQGVKVEPNLTYGKLLAEAFDHFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|139438509|ref|ZP_01772025.1| Hypothetical protein COLAER_01018 [Collinsella aerofaciens ATCC
           25986]
 gi|133776048|gb|EBA39868.1| Hypothetical protein COLAER_01018 [Collinsella aerofaciens ATCC
           25986]
          Length = 654

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 153/366 (41%), Gaps = 27/366 (7%)

Query: 2   HQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     +++  YR+R               KR+ I S+ R +   + ++E+++  
Sbjct: 148 RPLPEKFHGLSDKETRYRQRYVDLIANDDVRETFRKRSQILSTFRRFMESDGYMEVETPI 207

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  T  + F T     + + +  YL+ + E   K+ +  G E++F     +RN  
Sbjct: 208 LQTIQGGAT-AKPFITHF---NALDQECYLRIATELHLKRCIVGGFERVFEIGRIFRNEG 263

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEY 167
               H PEFT +E YRA    E +      +I+ A +     ++  +Q    +   E   
Sbjct: 264 MDLTHNPEFTTMEAYRAFSDLEGMKALAQGVIKAANKAIGNPEVIEYQGQTIDLSGEWAS 323

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
             + +  +      +       +              G+ +  + T   I + I  E  E
Sbjct: 324 RPMTDIVSDVLGKKVTIDTPAEELAAAARE------KGLEIKPEWTAGKIIAEIYDELGE 377

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               I   T +  YP   S LA  +  DPR T RFEL     E  NA  EL DP++Q  R
Sbjct: 378 DT--IVNPTFVCDYPIEVSPLAKRFEDDPRLTHRFELVIAGHEYANAFSELNDPVDQAER 435

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  +M EK    +E    DED++  L   MP + GI +G DR+VML+T   +I +V+  P
Sbjct: 436 FAAQMAEKAGGDDEAMEYDEDYVRALEYGMPPAGGIGIGIDRVVMLLTNQASIRDVLLFP 495

Query: 347 FSQSNQ 352
             +  +
Sbjct: 496 HMKPEK 501


>gi|308183983|ref|YP_003928116.1| lysyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308059903|gb|ADO01799.1| lysyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 501

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 172/366 (46%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I    + D  ++ DR L YL   + G++V  + T   + +      +E  
Sbjct: 317 YLDALETIGGI----SKDILEKEDRLLAYLL--ERGVKVEPNLTHGKLLAEAFDHFVEHK 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|295676933|ref|YP_003605457.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295436776|gb|ADG15946.1| lysyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 518

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 158/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R    SS+R+Y  +  F+E+++ 
Sbjct: 159 LRPLPDKFHGLADQEMKYRQRYVDLIVTPETRRTFVARTKAISSIRKYMADANFMEVETP 218

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + FST     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 219 MLHPIPGGAA-AKPFSTH---HNALDMQMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 274

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     +IR AA +       ++Q    +      
Sbjct: 275 GVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLSKPFH 334

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         N    D   L  + ++ G+  +     +     + +   
Sbjct: 335 RLTITQAIQKYA-----PQYTNEQLADTTFLRAELKKFGVDASQPQFLNAGVGSLQLALF 389

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 390 EETAESQLWEPTYIIDYPIEVSPLARASDKVAGITERFELFITGREIANGFSELNDPEDQ 449

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++ +K     E    D D++  L   MP + G  +G DRLVM++T + +I +VI
Sbjct: 450 AARFKKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMMLTDSPSIRDVI 509

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 510 LFPHLRRE 517


>gi|58336620|ref|YP_193205.1| lysyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|58253937|gb|AAV42174.1| lys-tRNA synthetase lysrs [Lactobacillus acidophilus NCFM]
          Length = 516

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 97/369 (26%), Positives = 160/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y  +  F+E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEAIYRQRYLDLITNRDSYMRFVHRTQIIQAIRDYLNKQDFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GLDTHHNPEFTELETYAAYWDFHDVMDEAEGIIRAAAKVVSPDGKITYQGTDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    + +            A++  I          + +    +  
Sbjct: 318 RVHMVDLIKEKTGVDFWKPMTD------EEAKKIAEEHDIHCESYWKVGHVINAFFEKYC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 372 EET--IVDPTFVYGHPVEISPLAKKNADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEAQMAERDAGNDEADMIDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPERVE 498


>gi|332307385|ref|YP_004435236.1| lysyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174714|gb|AEE23968.1| lysyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 517

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 162/379 (42%), Gaps = 35/379 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I + +R +  E +F+E+++ 
Sbjct: 139 LRPLPEKFHGLADQETKYRQRYVDLITNQQTRDTFMIRSKIVTGIRNFLSERKFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  + F+T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MLQVIPGGAT-AKPFTTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------- 158
                H PEFTMLE+Y+A+  Y+ LM     ++R  A+           +          
Sbjct: 255 GLSTRHNPEFTMLEFYQAYADYQDLMNLTEEMLRSVAQDVLGTSIVKNTIKDSEGNVVEE 314

Query: 159 --CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDT 213
              +     + +T++EA  +Y        +++P+      L   A+Q  I+         
Sbjct: 315 KTYDFGQPFQRLTMSEAVIKYWPEANVEAINDPE-AHLDELKAMAKQLHIKEPEVDGIWG 373

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
                  I     E    ++  T +  YP   S LA     +   T RFE +    EL N
Sbjct: 374 AGKYLCEIFEATAEEQ--LDQPTFITAYPWEVSPLARRNDDNSFVTDRFEFFVGGRELAN 431

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              EL D  +Q  RF K++ EK    +E    D+D++  L   +P ++G  +G DRLVML
Sbjct: 432 GFSELNDSEDQEARFRKQVAEKDAGDDEAMHFDDDYIRALEYGLPPTAGEGIGIDRLVML 491

Query: 333 VTGANNINEVIWTPFSQSN 351
            T +  I +VI  P  +  
Sbjct: 492 FTDSPTIKDVILFPHMKPE 510


>gi|330828581|ref|YP_004391533.1| Lysyl-tRNA synthetase, heat inducible [Aeromonas veronii B565]
 gi|328803717|gb|AEB48916.1| Lysyl-tRNA synthetase, heat inducible [Aeromonas veronii B565]
          Length = 511

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 89/372 (23%), Positives = 157/372 (42%), Gaps = 31/372 (8%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D   R              R   + R  + + +R++F E +F+E+++ 
Sbjct: 151 LRPLPEKHKGLTDQEARCRQRYLDLIANEESRKTFMIRTQVVAGIRKFFNEKRFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 211 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVYEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN------CNP 161
                H PEFTM+E+Y A+  Y  LM     ++R  A+                    + 
Sbjct: 267 GISVRHNPEFTMIEFYMAYADYIDLMDLTEELLRTLAQDILGDTKIRYAKEGEEGLTIDF 326

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
               + +T+ E+  ++        +   D          A++  I +        + + I
Sbjct: 327 GQPFQRLTMVESILKF-----NPDVTLDDLATLESAKAVAKRLHIELMKGWELGHVITAI 381

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL D 
Sbjct: 382 FEETVE--HMLLQPTFITEYPAAVSPLARRNDVNPDVTDRFEFFIGGRELANGFSELNDA 439

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +Q  RF+ ++ +K+   +E    D DF+  L   +P ++G  +G DRLVML T ++ I 
Sbjct: 440 EDQAKRFQDQVDQKEAGDDEAMFYDADFVTALEHGLPPTAGQGIGIDRLVMLFTNSHTIR 499

Query: 341 EVIWTPFSQSNQ 352
           +VI  P  +  +
Sbjct: 500 DVILFPALRPQK 511


>gi|209519986|ref|ZP_03268765.1| lysyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209499583|gb|EDZ99659.1| lysyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 518

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 158/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              L R    SS+R+Y  +  F+E+++ 
Sbjct: 159 LRPLPDKFHGLADQEMKYRQRYVDLIVTPETRRTFLARTKAISSIRKYMADANFMEVETP 218

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + FST     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 219 MLHPIPGGAA-AKPFSTH---HNALDMQMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 274

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     +IR AA +       ++Q    +      
Sbjct: 275 GVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLSKPFH 334

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         N    D   L  + ++ G+  +     +     + +   
Sbjct: 335 RLTITQAIQKYA-----PQYTNEQLADSAFLRAELKKFGVDASQPQFLNAGVGSLQLALF 389

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 390 EETAESQLWEPTYIIDYPIEVSPLARASDKVDGITERFELFITGREIANGFSELNDPEDQ 449

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++ +K     E    D D++  L   MP + G  +G DRLVM++T + +I +VI
Sbjct: 450 AARFKKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMMLTDSPSIRDVI 509

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 510 LFPHLRRE 517


>gi|257124941|ref|YP_003163055.1| lysyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257048880|gb|ACV38064.1| lysyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 494

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 165/371 (44%), Gaps = 29/371 (7%)

Query: 2   HQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +       +  YR+R             + KR  I    R Y  ++ F E+++  
Sbjct: 136 RPLPEKFHGLTNIETRYRQRYVDLVMNREVMETMKKRFQIIRFFRSYLEKHGFTEVETPM 195

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G  T  R F T     + +   L+L+ +PE   K+LL  G EK+F    ++RN  
Sbjct: 196 MHPVAGGAT-ARPFVTH---HNALDMELFLRIAPELYLKRLLVGGFEKVFEINRSFRNEG 251

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPEY 167
               H PEFTM+E Y+A+  +  +M    ++I       + K    +++   N       
Sbjct: 252 ISIKHNPEFTMMELYQAYADFNDMMDLTEDLISSLTFELHGKYEIEYEDKTINMAKPWRR 311

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD--IFSRILIEK 225
           +T+ +        D  T   + D  ++      A++  I +  D T++   I + I  EK
Sbjct: 312 VTMKDIVKETTGFDFDTISSDEDAINK------AKEMNIPLEKDKTYTKYGILNLIFEEK 365

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S L+     +  +  RFEL+    E  NA  EL DP +Q+
Sbjct: 366 VEET--LLNPTFITEYPKEISPLSKNQKGETEWVDRFELFISGREFANAYSELNDPRDQK 423

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE++++ ++   +E   +D D++  L   MP + G+ +G DRLVML T + +I +VI 
Sbjct: 424 ERFEEQVKLREAGDDEAQGMDLDYIRALEYGMPPAGGLGIGIDRLVMLQTNSASIRDVIL 483

Query: 345 TPFSQSNQEEI 355
            P  +    E+
Sbjct: 484 FPTLRKEDIEL 494


>gi|329963609|ref|ZP_08301087.1| lysine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328528514|gb|EGF55487.1| lysine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 574

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 92/359 (25%), Positives = 150/359 (41%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              LKR  I S++R    E  + E+++  LQ  PG 
Sbjct: 157 DSFEDPELRYRQRYVDLIVNEGVKETFLKRAKIISTMRTVLDEAGYTEVETPILQSIPGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AS-ARPFITH---HNSLDMDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++       N            +  +    + + EA 
Sbjct: 273 EFTCVELYVQYKDYNWMMSFTEKLLERICIAVNGCTETEIDGKTISFKAPYRRLPILEAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                 D        +      +    ++  + +        +   I  E  E       
Sbjct: 333 KEKTGYD-------LEGKTEEEIRQICKELKMEIDDTMGKGKLIDEIFGEFCEGT--FIQ 383

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF+ +++ 
Sbjct: 384 PTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFKDQLRL 443

Query: 295 KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DFL  L   MP +SGI +G DRL ML+TG + I EV++ P  +  +
Sbjct: 444 SEKGDDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGKSFIQEVLFFPQMRPEK 502


>gi|78485071|ref|YP_390996.1| lysyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|78363357|gb|ABB41322.1| lysyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 504

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 153/364 (42%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD-------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D              +   R   + R+ I   +R + +   F+E+++ 
Sbjct: 149 LRPLPDKFHGLQDQEIKYRQRYVDLIVNEESRDTFMIRSKIVQHVRNFLINKGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G EK+F    ++RN 
Sbjct: 209 MMHVIPGGAT-AKPFHTH---HNALDMPLYLRIAPELYLKRLVVGGFEKVFEINRSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQ-LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y Q +      +   A          +Q    +      
Sbjct: 265 GLSTRHNPEFTMVEFYSAYTDYNQLMDYTEELLKELAELTVGSSQVPYQGQVFDFGKPFA 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y       +    +  D       A+   + V        I++ I  E  
Sbjct: 325 RLTMKDAILKY-----NPSATAENLDDLESARALAKSLNVHVEESYGLGKIWTEIFEETA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P  T RFEL+    EL N  +EL D  +Q  
Sbjct: 380 EEK--LMDPTFITEYPAEVSPLARRNDDNPFITDRFELFIGGRELANGFNELNDAEDQAE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +++ K    +E    DED++  L   MP ++G  +G DRLVML T    I +V+  
Sbjct: 438 RFKAQVEAKDAGDDEAMHYDEDYIVALEHGMPPTAGEGIGIDRLVMLFTDKPTIRDVLLF 497

Query: 346 PFSQ 349
           P  +
Sbjct: 498 PHMR 501


>gi|221124356|ref|XP_002162882.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 537

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 162/368 (44%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   S+LRE+ V + F+E+++ 
Sbjct: 180 LRPMPDKFHGMADQETKYRQRYVDLMTDVESRKRFVARSKAVSALREFMVSHNFLEVETP 239

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + ++L+ +PE   K+L+  G +++F    ++RN 
Sbjct: 240 MLHPIPGGA-NAKPFKTH---HNALDQEMFLRIAPELYLKRLIVGGFDRVFEINRSYRNE 295

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y+ LM     +IR AA         S+     +     E
Sbjct: 296 GISVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAARKATGGLQLSYAGKPVDLEQPFE 355

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y +          +  D   L    ++ G+  A +       + + +   
Sbjct: 356 RLTIVEAIQKYTD-------AGDNVFDATWLTNAVKKLGLTEAKNRLEGRSLASLQVLYF 408

Query: 227 EPNLGINCCT--ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E  +         +  +P   S LA      P  T+RFELY    E  N   EL D  +Q
Sbjct: 409 EETVEEKLWNPTFIMEHPTEISPLARANDDRPEVTERFELYITGREFGNGFSELNDAEDQ 468

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+ ++  K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 469 AARFQAQVAAKDSGDDEAMHFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSASIRDVI 528

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 529 LFPALRRE 536


>gi|47230424|emb|CAF99617.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 545

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 160/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  +  F+EI++ 
Sbjct: 176 LHMLPHLHFGLKDKETRYRQRYLDLILNDSVRQKFITRSKIITYVRSFLDQMGFLEIETP 235

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 236 MMNIIPGGAV-ARPFVT---YHNELDMNLYMRIAPELYHKMLVVGGVDRVYEIGRQFRNE 291

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 292 GIDMTHNPEFTTCEFYMAYADYHDLMEITERLLSGMVKQITGGYKITYHPDGPEGQAYEV 351

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           N     + +++     +   +    T        R        + G+      T + +  
Sbjct: 352 NFTPPFKRLSMTHDLEKIMGVKFPPTDSYNSDETRKFFDNLCAEKGVECPPPRTTARLLD 411

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E      C T +  +P   S LA  + ++   T+RFEL+    E+CN+  EL 
Sbjct: 412 KLVGEFLEETC--ICPTFICDHPQIMSPLAKWHRSEKGLTERFELFVMKKEICNSYTELN 469

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K +  +E   IDE F   L   +P ++G  MG DRL M +T +NN
Sbjct: 470 DPVRQRELFEQQAKAKAEGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRLAMFLTDSNN 529

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  + +  +
Sbjct: 530 IKEVLLFPAMKPDDNK 545


>gi|24640849|ref|NP_572573.1| Lysyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|19528341|gb|AAL90285.1| LD23509p [Drosophila melanogaster]
 gi|22832013|gb|AAN09255.1| Lysyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|220944834|gb|ACL84960.1| Aats-lys-PA [synthetic construct]
 gi|220954614|gb|ACL89850.1| Aats-lys-PA [synthetic construct]
          Length = 574

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R                R  I S +R++     F+EI++ 
Sbjct: 193 LHMLPHLHFGLKDKETRYRQRYLDLILNNNVREKFQIRAKIISYVRQFLDRLGFLEIETP 252

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+++ +PE   K L+  G ++++     +RN 
Sbjct: 253 MMNMIAGGAT-AKPFVTH---HNDLKMDLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNE 308

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  +M     ++    +          +           
Sbjct: 309 GIDLTHNPEFTTCEFYMAYADYADIMDITEQLVSGMVKAIRGSYKVIYHPEGPEGPEQEL 368

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +       +                L     +  +      T + +  
Sbjct: 369 DFTPPFKRVSMIKTLEEKLQVKFPAADTFNSPETNQFLSQLCAKHQVECPAPRTTARLLD 428

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 429 KLVGEFIEEFCV--NPTFICEHPQIMSPLAKYHRSIPGLTERFELFVAKKEICNAYTELN 486

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 487 DPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRLAMFLTDSNN 546

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 547 IKEVLLFPAMKPE 559


>gi|229825232|ref|ZP_04451301.1| hypothetical protein GCWU000182_00584 [Abiotrophia defectiva ATCC
           49176]
 gi|229790604|gb|EEP26718.1| hypothetical protein GCWU000182_00584 [Abiotrophia defectiva ATCC
           49176]
          Length = 636

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 154/365 (42%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR+ I   +R +  E  F+E+++ 
Sbjct: 139 LRPLPEKYHGLKDTEARYRQRYLDLIMNQDVRNTFEKRSQILKEIRSFLAEKDFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G E++F     +RN 
Sbjct: 199 LLVENAGGAA-ARPFFTHY---NALDEERKLRISLELYLKRLIVGGFERVFEIGRVFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M     + R  A +V    + S+  +  +     +
Sbjct: 255 GVDTRHNPEFTLMELYQAYTDYNGMMDLTEEMFRYLAEKVCGSAVISYNGIELDFSKPFK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A   Y+ +D        +          A++  I         DI +    E  
Sbjct: 315 RITMLDAVKDYSGVDFS------EITTDEAAKAIAKEKNIAFEPHHKRGDIINLFFEEFC 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E  +     T +  +P   S L    P      +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 369 EEKMV--QPTFVMDHPVEISPLTKKKPGAEDRVERFELFINTWEMCNAYSELNDPIDQRE 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +         E    DEDFL  L   MP + GI  G DRLVML+T + +I +V+  
Sbjct: 427 RFAAQDALAAAGDEEANHTDEDFLTALEYGMPPTGGIGYGIDRLVMLLTDSASIRDVLLF 486

Query: 346 PFSQS 350
           P  +S
Sbjct: 487 PTLKS 491


>gi|167837159|ref|ZP_02464042.1| lysyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 508

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 154/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R++  + +F+E+++ 
Sbjct: 149 LRPLPDKFHGLADQETRYRQRYVDLIVTPETRATFRARTKAIASIRKFMSDAEFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR  A +        +Q    +      
Sbjct: 265 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTERLIRQAAVDALGTATIQYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         +    D   L  + ++ G+ V      +     + +   
Sbjct: 325 RLTITQAIRKYA-----PNYTDGQLSDDAFLRSELKRLGVDVTQPAFLNAGIGALQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAEAQLWEPTFIIDYPIEVSPLARESDTVTGITERFELFITGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++++K     E    D D++  L   MP + G  +G DRLVML+T +  I +V+
Sbjct: 440 AARFKKQVEQKDAGDEEAMFFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPTIRDVL 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|194890440|ref|XP_001977309.1| GG18967 [Drosophila erecta]
 gi|190648958|gb|EDV46236.1| GG18967 [Drosophila erecta]
          Length = 574

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R                R  I S +R++     F+EI++ 
Sbjct: 193 LHMLPHLHFGLKDKETRYRQRYLDLILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETP 252

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+++ +PE   K L+  G ++++     +RN 
Sbjct: 253 MMNMIAGGAT-AKPFVTH---HNDLKMDLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNE 308

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  +M     ++    +          +           
Sbjct: 309 GIDLTHNPEFTTCEFYMAYADYADIMDITEQLVSGMVKAIRGSYKIIYHPEGPEGPEQEL 368

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +       +                L     +  +      T + +  
Sbjct: 369 DFTPPFKRVSMIKTLEEKLQVKFPAADTFNSPETNQFLSQLCAKHQVECPAPRTTARLLD 428

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 429 KLVGEFIEEFCV--NPTFICEHPQIMSPLAKYHRSIPGLTERFELFVAKKEICNAYTELN 486

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 487 DPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRLAMFLTDSNN 546

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 547 IKEVLLFPAMKPE 559


>gi|51891663|ref|YP_074354.1| lysyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|51855352|dbj|BAD39510.1| lysyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 495

 Score =  326 bits (835), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 108/365 (29%), Positives = 165/365 (45%), Gaps = 23/365 (6%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-------------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    RD   R R                  R+ I +SLR    E  FIE+++ 
Sbjct: 140 LRPLPDKHAGLRDVELRYRERHLDLLVNPESRAVFEARSRIVASLRRTLDELGFIEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + + + L L+ + E   K+L+  G E+++     +RN 
Sbjct: 200 VLVPLAGGAA-ARPFLT---YHNALDRQLSLRIATELHLKRLVVGGMERVYEIGRVFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT LE Y+A+  Y  +M     +++ AA   N    S +    +       
Sbjct: 256 GLSTRHNPEFTSLEAYQAYADYRDMMDLTERLVQNAARAVNG---SLRAGEIDLTGPFRR 312

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           IT+AEA      ID+     + D+         A +A        TW  + + +     E
Sbjct: 313 ITMAEAVKEATGIDVMALGSSGDERRDAEAVRAAAEAAGYEVEAATWGGLLAELFERYAE 372

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA   P DPR T+RFELY    E+ NA  EL DP +QR R
Sbjct: 373 DR--LVQPTFVLGHPVETSPLARRDPRDPRLTERFELYVQGREIANAFSELNDPEDQRRR 430

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE ++ +++    E +P+DEDFLA L   +P + G+ +G DRLVML+TGA +I +VI  P
Sbjct: 431 FEAQLAQRQAGDEEAHPMDEDFLAALEVGLPPTGGLGIGVDRLVMLLTGAPSIRDVILFP 490

Query: 347 FSQSN 351
             ++ 
Sbjct: 491 TMRNR 495


>gi|317504976|ref|ZP_07962924.1| lysine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315663858|gb|EFV03577.1| lysine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 579

 Score =  326 bits (835), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 90/377 (23%), Positives = 153/377 (40%), Gaps = 36/377 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +   R+R              LKR  I  ++R +F E+ 
Sbjct: 142 LKPLPIVKYKDGVAYDKFDDPELRARQRYVDLIVNDGIKETFLKRATILRTMRNFFDEHG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPTLQSIAGGAS-ARPFITHF---NALNIDMYMRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA--NQKIFSFQNVN 158
              +RN      H PEFT +E Y  ++ Y  +M     ++    +               
Sbjct: 258 GKNFRNEGMDKFHNPEFTCMELYVQYKDYNWMMSFTEQLLETICKAVNNGSTEVKNGEHT 317

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDI 217
            +  +    + + EA       D        D+ +  +  +  ++  I  +        +
Sbjct: 318 ISFKAPFRRLPILEAIKEKTGFD------LTDKNEEEIRKIATEELKIEGLDESFGKGKL 371

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I  E  E        T +  YP   S L  ++ +    T+RFEL     EL NA  E
Sbjct: 372 IDEIFGEFCEGT--FIQPTFITDYPVEMSPLTKMHRSKAGLTERFELMVNGKELANAYSE 429

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGA 336
           L DPI+Q  RF+ +M+   K  +E   ID+DFL  L   MP +SGI +G DRL ML+TG 
Sbjct: 430 LNDPIDQEERFKDQMKLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLCMLMTGK 489

Query: 337 NNINEVIWTPFSQSNQE 353
             I EV+  P  +   +
Sbjct: 490 EFIQEVLLFPQMKPEAK 506


>gi|312796707|ref|YP_004029629.1| lysyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312168482|emb|CBW75485.1| Lysyl-tRNA synthetase (EC 6.1.1.6) [Burkholderia rhizoxinica HKI
           454]
          Length = 510

 Score =  326 bits (835), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 148/368 (40%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +S+R +     F+E+++ 
Sbjct: 151 IRPLPDKFHGLSDQETRYRQRYVDLIVTPEARQTFQARTRTIASIRHFMTNADFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G  ++F     +RN 
Sbjct: 211 MLHPIPGGAA-AKPFITH---HNALDMQMFLRIAPELYLKRLIVGGLNRVFEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR  A +        +Q    +      
Sbjct: 267 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAALDARGTTAVHYQGRELDLGKPFH 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+  A  +YA         +    DR  L  +  + G+        +     + +   
Sbjct: 327 RLTITGAIQKYA-----PQYSDAQLADRDWLRAELHRLGVDTHAAPLRNAGVGALQLALF 381

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL DP +Q
Sbjct: 382 EETAEAQLWEPTYIVDYPVEVSPLARASDTVPGITERFELFMTGREIANGFSELNDPEDQ 441

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF +++ +K     E    D D++  L   MP + G  +G DRLVML+T + +I +VI
Sbjct: 442 AARFRQQVAQKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVI 501

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 502 LFPHLRRE 509


>gi|288572810|ref|ZP_06391167.1| lysyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288568551|gb|EFC90108.1| lysyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 503

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 164/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R               +R  I SS+R+   ++  +E+++ 
Sbjct: 149 LRPLPEKWHGLTDTEVRYRKRYVDLMVNPEVRDVFRQRARIISSVRKTLEDHGTLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L Y  G   + R F T     + +   +YL+ + E   K+L+     +++     +RN 
Sbjct: 209 MLSYLAGGA-NARPFVTH---HNALDLDMYLRIATELHLKRLVVGMMGRVYEMGKNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
               +H PEFT +E Y  +  Y  +M     I+R  A +       ++Q    +      
Sbjct: 265 GMDAMHNPEFTAMEVYWPYCDYVDMMDLTEEIVRKAALDATGSTTVTWQGTELDLGKPFR 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ E    +  +D     D+ +          A+  G+ +  D++   + + ++ E +
Sbjct: 325 RATMVELVKEHCGVDFDGIDDDNE------ARRIAEGEGLALEGDESRFKVLTMMVEEFV 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L+   P +P +T RFEL+ C  E+ N   EL DPI+QR 
Sbjct: 379 EEH--LVQPTFVMGHPTEISPLSKRNPDNPDYTHRFELFVCGSEVANGFSELNDPIDQRA 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K     E +P DEDF+  L   +P + G+ +G DRL+M +T + +I +VI  
Sbjct: 437 RFEDQAKLKAAGDEEGHPFDEDFVNALEQGLPPTGGLGIGIDRLIMFLTDSRSIRDVILF 496

Query: 346 PFSQSN 351
           P  +  
Sbjct: 497 PTMKPK 502


>gi|187924548|ref|YP_001896190.1| lysyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|238689470|sp|B2SXV7|SYK_BURPP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|187715742|gb|ACD16966.1| lysyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 518

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 159/368 (43%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R    SS+R++  E  F+E+++ 
Sbjct: 159 LRPLPDKFHGLADQEMKYRQRYVDLIVTPETRKTFVARTKAISSIRKFMAEADFMEVETP 218

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F+T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 219 MLHPIPGGAA-AKPFTTH---HNALDMQMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 274

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     +IR AA +       ++Q    +      
Sbjct: 275 GVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLAKPFH 334

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         N    D   L  + ++ G+  +     +     + +   
Sbjct: 335 RLTITQAIQKYA-----PQYTNEQLADSAFLRTELKKFGVDASQPQFLNAGVGSLQLALF 389

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 390 EETAESQLWEPTYIIDYPIEVSPLARASDKVAGITERFELFITGREIANGFSELNDPEDQ 449

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+K++ +K+    E    D D++  L   MP + G  +G DRLVM++T + +I +VI
Sbjct: 450 AARFKKQVDQKEAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMMLTDSPSIRDVI 509

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 510 LFPHLRRE 517


>gi|326692382|ref|ZP_08229387.1| lysyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 493

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 158/364 (43%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ I S++R Y     F+E+++ 
Sbjct: 142 LRPMPDKFHGIADVETRYRKRYLDLIANEDSFKKFQLRSKIISAIRAYMDSQDFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   +Y++ + E   K+L+  G E+++     +RN 
Sbjct: 202 ILQTEAGGAA-ARPFITH---HNALNIDMYMRIATELYLKRLVVGGYERVYEIGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  +  +M +   I + AA V +     ++Q    +  S+  
Sbjct: 258 GMDPKHNPEFTTMETYAAYMDFTDVMDETEGIFKAAAAVVSDDLKVTYQGTEIDLGSKFA 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +       +D    +   D          A +  ++         I +    E +
Sbjct: 318 RKHMVDLIKEQTGVDFWQDMSVED------AQKLADEHHVKYEKYWGVGHIINAFFEEFV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 GDT--LVQPTFVYGHPVEVSPLAKRNAEDPRFTDRFELFIMGSEYGNAFTELNDPIDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E++   +E   IDEDF+  L   MP + G+ +G DRLVML+T ++ I +V+  
Sbjct: 430 RFEAQVAERENGNDEAENIDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSDTIRDVLLF 489

Query: 346 PFSQ 349
           P  +
Sbjct: 490 PTMR 493


>gi|134095413|ref|YP_001100488.1| lysyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166229807|sp|A4G778|SYK_HERAR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|133739316|emb|CAL62365.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Herminiimonas
           arsenicoxydans]
          Length = 511

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 85/366 (23%), Positives = 154/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    SS+R +   N F+E+++ 
Sbjct: 156 LRPLPDKFHGLADQETKYRQRYVDLIMNEDTRRTFKARTAAISSIRRFMERNDFMEVETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F+T     + +   ++L+ +PE   K+L+  G +++F     +RN 
Sbjct: 216 MLHTIPGGAA-AKPFTTH---HNALDMEMFLRIAPELYLKRLVVGGFDRVFEINRNFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     +IR AA +       ++     +      
Sbjct: 272 GVSIRHNPEFTMMEFYAAYTDYKWLMDFTEAVIRQAAIDAHGTATLTYGGRELDLAKPFH 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+  A  ++A         +    D   +  + ++ G++         +   +  E  
Sbjct: 332 RLTIVGAINKFA-----PQYTHEQLHDAEYIKAELKKFGVKPHAHSGLGALQLALFEETA 386

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA         T+RFEL+    E+ N   EL D  +Q  
Sbjct: 387 EAQ--LWEPTYIIDYPVEVSPLARASDTVAGITERFELFMVGREIANGFSELNDAEDQAA 444

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K     E    D D++  L   MP + G  +G DRL+M++T + NI +V+  
Sbjct: 445 RFQAQVAAKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLMMIITDSPNIRDVLLF 504

Query: 346 PFSQSN 351
           P  +  
Sbjct: 505 PHLRRE 510


>gi|146689|gb|AAA24096.1| lysyl-tRNA synthetase (lysU) (E.C. 6.1.1.6) [Escherichia coli]
          Length = 501

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 165/367 (44%), Gaps = 29/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 149 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +Y + +PE   K+L+  G E++F   H  RN 
Sbjct: 209 MMQVIPGGAS-ARPFITH---HNALDLDMYARIAPELYLKRLVVGGFERVFE--HVTRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 263 GI-RRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V          + I  E +
Sbjct: 322 KLTMREAIKKY-----RPETDMADLDNFDARKALAESIGITVEKSWGLGRSVTEIFDEVV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   + +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 377 EGH--VIQPSFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF++++  K    +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  
Sbjct: 435 RFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILF 494

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 495 PAMRPQK 501


>gi|324506723|gb|ADY42863.1| Lysyl-tRNA synthetase [Ascaris suum]
          Length = 603

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 89/378 (23%), Positives = 166/378 (43%), Gaps = 29/378 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +  +  +  YR R              + R  + + LR Y     F+E+++ 
Sbjct: 220 LHMLPHTHFGLKNQETRYRMRYLDLIMNPSVKDKFVIRAKMITFLRRYLDNLGFLEVETP 279

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K L+  G ++++     +RN 
Sbjct: 280 MMNQIAGGAT-AKPFITH---HNELDMDLFLRVAPELYHKMLVVGGIDRVYEVGRLFRNE 335

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y A+  YE L+K   +++       +       +          +
Sbjct: 336 GIDQTHNPEFTTCEFYMAYADYEDLIKLTEDLLSKMVFAIHGTYKIQYHPNGAGTEPVYD 395

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +     + + + E   +   + L T           ++   A + G+      T + + 
Sbjct: 396 IDFTPPFKRVNMYEGLEKALGMKLPTPDTLDTAEANAVIDKIALERGVECPPPRTTARLL 455

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++ E +E        T L  +P   S L+  + + P  T+RFEL+    E+ NA  EL
Sbjct: 456 DKLVGEYLES--DFISPTFLVGHPQIMSPLSKWHRSIPGLTERFELFVVTKEIVNAYTEL 513

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP+ QR RFE++ ++K+   +E   IDE+F   L   +P ++G  MG DRL M+ T +N
Sbjct: 514 NDPLAQRQRFEQQAKDKQAGDDEAQLIDENFCTALEYGLPPTAGWGMGIDRLTMVFTDSN 573

Query: 338 NINEVIWTPFSQSNQEEI 355
           NI EV++ P  +  ++++
Sbjct: 574 NIKEVLFFPAMRPEEQKV 591


>gi|116495963|ref|YP_807697.1| lysyl-tRNA synthetase (class II) [Lactobacillus casei ATCC 334]
 gi|116106113|gb|ABJ71255.1| Lysyl-tRNA synthetase (class II) [Lactobacillus casei ATCC 334]
          Length = 498

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR  I S++REY   N F+E+++ 
Sbjct: 146 LRPLPDKWHGLTDVEQKYRKRYLDLISNEDSFDRFVKRTKIVSAVREYLDNNGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 206 VLHNQAGGA-NARPFVTH---HNALDIDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+     +M +   I R AA         ++Q +  +  +   
Sbjct: 262 GIDTKHNPEFTELETYAAYRDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAPFA 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +   D          A +  +          I S    + +
Sbjct: 322 RINMLDAIKDKTGVDFWPEMSVDD------ARKLADEHDVHYETYWKVGHIISAFFDQFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRF +RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EET--LIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGGEYANAFTELNDPIDQRQ 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  EK    +E   ID+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEAQAAEKSAGNDEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 493

Query: 346 PFSQS 350
           P  + 
Sbjct: 494 PTLRP 498


>gi|255691388|ref|ZP_05415063.1| lysine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260623032|gb|EEX45903.1| lysine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 576

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 91/360 (25%), Positives = 148/360 (41%), Gaps = 27/360 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              LKR  +  +LR    E  + E+++  LQ   G 
Sbjct: 157 DSFEDPELRYRQRYVDLVVNDGIKETFLKRATVVKTLRNVLDEAGYTEVETPILQSIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++       N            +  +    + + +A 
Sbjct: 273 EFTCMELYVQYKDYNWMMNFTEKLLERICIAVNGCTESVVDGKTISFKAPYRRLPILDAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEKIEPNLGIN 233
                 DL              +    ++  +  +        +   I  E  E      
Sbjct: 333 KEKTGYDLNG-------KSEEEIRQVCKELKMEEIDETMGKGKLIDEIFGEFCEGTY--I 383

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DP++Q  RF+++M+
Sbjct: 384 QPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPLDQEERFKEQMR 443

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   I EV++ P  +  +
Sbjct: 444 LADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFPQMRPEK 503


>gi|170017769|ref|YP_001728688.1| lysyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|238688932|sp|B1MVJ0|SYK_LEUCK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169804626|gb|ACA83244.1| Lysyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 493

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 155/364 (42%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ I S++R Y     F+E+++ 
Sbjct: 142 LRPMPDKFHGIADVETRYRKRYLDLIANEESFKKFQLRSKIISAIRAYMDSQDFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   +Y++ + E   K+L+  G E+++     +RN 
Sbjct: 202 ILQTEAGGAA-ARPFITH---HNALNIDMYMRIATELYLKRLVVGGFERVYEIGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  +  +M +   I + AA V +     ++Q    +  S   
Sbjct: 258 GMDPKHNPEFTTMETYAAYMDFTDVMDETEGIFKAAASVVSDDLKVTYQGTEIDLGSNFA 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +       ID    +              A    ++         I +    E +
Sbjct: 318 RKHMVDLIKEQTGIDFWQDMSV------EAAQKLADDKHVKYEKYWGVGHIINAFFEEFV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EDT--LVQPTFVYGHPVEVSPLAKRNAEDSRFTDRFELFIMGSEYGNAFTELNDPIDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E++   +E   IDEDF+  L   MP + G+ +G DRLVML+T ++ I +V+  
Sbjct: 430 RFEAQVAERENGNDEAENIDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSDTIRDVLLF 489

Query: 346 PFSQ 349
           P  +
Sbjct: 490 PTMR 493


>gi|295106037|emb|CBL03580.1| Lysyl-tRNA synthetase (class II) [Gordonibacter pamelaeae 7-10-1-b]
          Length = 660

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 155/366 (42%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               KR  I +++R Y  ++ + E+++ 
Sbjct: 148 LRPLPEKFHGLADKETRYRQRYVDLVMNPEVKSTFEKRFKIVAAIRRYMEDHGYYEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + + K  YL+ + E   K+L+  G EK+F     +RN 
Sbjct: 208 ILHPILGGA-NARPFVTH---HNALDKDFYLRIATELHLKRLIVGGFEKVFEIGRQFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E+Y+A    E +M+    +++ AA          +Q    +      
Sbjct: 264 GMDPYHNPEFTTMEFYQAFSDLEGMMELTQGVVQAAAMAACGTTQVEYQGQQVDLGGTWR 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ E  +  A  D+           R  L    ++ G           + + I     
Sbjct: 324 RATMIELASEGAGEDVSFART------RDELVAILERNGGHAEDAWGKGKLIAEIFEAVA 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P  T+RFEL+ C  E  NA  EL DPI+Q  
Sbjct: 378 EEK--LIQPTFVTEHPLEVSPLAKKKAGEPELTERFELFICGHEYANAFGELNDPIDQAE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++ K    +E    D+D++  L   MP + G  +G DRL ML+T A +I +V+  
Sbjct: 436 RFRKQVEAKDLGDDEAMGYDDDYVRALEYGMPPAGGCGIGIDRLAMLLTDAPSIRDVLLF 495

Query: 346 PFSQSN 351
           P  +  
Sbjct: 496 PHMRDE 501


>gi|195350522|ref|XP_002041789.1| GM11355 [Drosophila sechellia]
 gi|194123594|gb|EDW45637.1| GM11355 [Drosophila sechellia]
          Length = 574

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R                R  I S +R++     F+EI++ 
Sbjct: 193 LHMLPHLHFGLKDKETRYRQRYLDLILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETP 252

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+++ +PE   K L+  G ++++     +RN 
Sbjct: 253 MMNMIAGGAT-AKPFVTH---HNDLKMDLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNE 308

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  +M     ++    +          +           
Sbjct: 309 GIDLTHNPEFTTCEFYMAYADYADIMDITEQLVSGMVKAIRGSYKIIYHPEGPEGPEQEL 368

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +       +                L     +  +      T + +  
Sbjct: 369 DFTPPFKRVSMIKTLEEKLQVKFPAADTFNSPETNQFLSQLCAKHQVECPAPRTTARLLD 428

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 429 KLVGEFIEEFCV--NPTFICEHPQIMSPLAKYHRSIPGLTERFELFVAKKEICNAYTELN 486

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 487 DPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRLAMFLTDSNN 546

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 547 IKEVLLFPAMKPE 559


>gi|257092653|ref|YP_003166294.1| lysyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257045177|gb|ACV34365.1| lysyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 504

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR R                R+ I  S+R + V + F+E+++ 
Sbjct: 150 LRPLPEKFHGLTDQEQKYRMRYVDLITNEQSRFTFAVRSRIVQSIRSFMVHHGFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  R F+T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMHPIPGGAT-ARPFATH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y QLM     ++R +A      + F +Q    +      
Sbjct: 266 GLSPRHNPEFTMMEFYEAYTEYRQLMDFTEGLLRHSAREALGAEAFEYQGRRLDFAKPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+++A  +                D   L  +     + +   D    +  ++  E  
Sbjct: 326 RLTISDAIRQ-----SHPGFSVAQLADAAWLREKLSAMKVDIGATDGLGTLQLKLFEETA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA    ++P   +RFEL+    E+ N   EL DP +Q  
Sbjct: 381 EA--DLWDPTFIIDYPAEVSPLARRSDSNPEVAERFELFIAGREIANGFSELNDPEDQAA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ + K+    E    D D++  L   +P + G  +G DRLVML+T + NI +VI  
Sbjct: 439 RFLEQAKAKEAGDEEAMYYDADYVRALEYGLPPTGGCGIGIDRLVMLLTDSPNIRDVILF 498

Query: 346 PFSQSN 351
           P  +  
Sbjct: 499 PQMRPE 504


>gi|298242602|ref|ZP_06966409.1| lysyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297555656|gb|EFH89520.1| lysyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 504

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 155/371 (41%), Gaps = 27/371 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDS 46
           +  +P +     D   R+R                   R+ + S++R +     ++E ++
Sbjct: 139 LQPLPEKYHGLEDKELRQRKRYLDLIANGEEVKTVFETRSRVISAMRRFLEGQGYLEFET 198

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             LQ   G  T  R F T     + + + LYL+ + E   K+L+  G E+++     +RN
Sbjct: 199 PILQPLYGGAT-ARPFITH---HNTLDRDLYLRIAIELYLKRLIVGGFERVYEIGRNFRN 254

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y+A+  Y  +MK    +I   A+        ++Q    +     
Sbjct: 255 EGIDRSHNPEFTMMECYQAYADYNDMMKLVEEMIAYIAQEVKGTTRVTYQGTEIDLTPPW 314

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             I + EA  +Y  ID+         PDR  L  +    G  V        +   +  E 
Sbjct: 315 PRIPLLEAIHKYTGIDINA------LPDRESLAAEMHAKGYIVDPKLGRGRLIDDLKGEM 368

Query: 226 IEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           +      +     L  YP   S L   +       +RF+ +   +E  N+  EL DP++Q
Sbjct: 369 LRKGIPELQQAIFLIDYPLDVSPLTKRHRTHSGLVERFQPFIGGLETGNSFTELNDPLDQ 428

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RFE +M++K +   E   +DEDFL  L   MP + G+ +G DRL M +    +I +VI
Sbjct: 429 RARFEDQMKQKSQGDEEAQVLDEDFLEALEIGMPPTGGVGIGVDRLAMFMADQESIRDVI 488

Query: 344 WTPFSQSNQEE 354
             P  +   EE
Sbjct: 489 LFPTMRKTAEE 499


>gi|227432626|ref|ZP_03914602.1| lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351596|gb|EEJ41846.1| lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 495

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I S++R Y   N F+E+++ 
Sbjct: 142 LRPMPDKFHGISDVETRYRKRYLDLIANEDSFKKFQERSHIISAIRAYMDRNDFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   +Y++ + E   K+L+  G E+++     +RN 
Sbjct: 202 ILQTEAGGAA-ARPFITH---HNALNIDMYMRIATELYLKRLVVGGMERVYEIGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  +  +M +   I + AA V +     ++Q    +  ++  
Sbjct: 258 GMDPKHNPEFTTMESYAAYMDFTDVMDETEGIFKAAASVVSDDLKITYQGTEIDLGTKFA 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +       ID    +   +          A    ++         I +    E +
Sbjct: 318 RKHLVDLIKEQTGIDFWQEMSVEE------AQKLADDNHVKYEKYWGVGHIINAFFEEFV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EDT--LVQPTFVYGHPVEVSPLAKKNTDDPRFTDRFELFIMGSEYANAFTELNDPIDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  E++   +E   IDEDF+  L   MP + G+ +G DRLVML+T ++ I +V+  
Sbjct: 430 RFEAQAAERENGNDEAEGIDEDFIEALEYGMPPTGGLGVGIDRLVMLLTDSDTIRDVVLF 489

Query: 346 PFSQSN 351
           P  +  
Sbjct: 490 PTMRPE 495


>gi|224824517|ref|ZP_03697624.1| lysyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603010|gb|EEG09186.1| lysyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 500

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 162/365 (44%), Gaps = 25/365 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               KR+ I   +R Y V+  ++E+++ 
Sbjct: 147 IRPLPEKFHGLTDQEQKYRQRYLDLIMNEQSRDVFTKRSQIVQGIRSYMVDEGYLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 207 MMHPIPGGAT-AKPFVTH---HNALDMPLYLRIAPELYLKRLVVGGLERVFEINRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E+Y A+  Y+++M+    +I+  A+     +           S+ E 
Sbjct: 263 GMSTRHNPEFTMMEFYEAYSDYQRMMEMTEGVIQKLAKDILGTLHIQYQGKTVDLSKFER 322

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +T+  A  +Y          +    DR  L  +  + G +    D    +   +  E  E
Sbjct: 323 LTIVGAIKKY-----NPHYSDEQLHDRAWLKEEIARLGGKPVLTDGIGGLQLSLFEECAE 377

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA         T+RFEL+    EL N   EL DP +Q  R
Sbjct: 378 SQ--LWNPTFIVDYPVEVSPLARGSDKHAGITERFELFVVGRELANGYSELNDPEDQAAR 435

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++Q+K    +E    D D++  L   +P + G  +G DRLVML+T + +I +VI  P
Sbjct: 436 FLAQVQQKDAGDDEAMHYDADYIRALEFGLPPTGGCGIGIDRLVMLLTDSPSIRDVILFP 495

Query: 347 FSQSN 351
             ++ 
Sbjct: 496 QMRAE 500


>gi|119476450|ref|ZP_01616801.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450314|gb|EAW31549.1| lysyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 503

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 159/376 (42%), Gaps = 36/376 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R Y     F+E+++ 
Sbjct: 138 LRPLPDKFHGLQDQEMRYRQRYVDLIVSDESRDVFKLRSKMISFMRRYLDNADFMEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 198 MMQVIPGGAT-ARPFVTH---HNSLDMDMYLRVAPELYLKRLVVGGFERVYEINRNFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-----------SFQN 156
                H PEFTMLE+Y+++  Y++LM    +++R  A+                    Q 
Sbjct: 254 GLSTRHNPEFTMLEFYQSYADYKELMDLTEDMLREMAKALLGTTILLNTVKNEDGEIVQE 313

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
            + +       I+V ++   +        +      D       A+   I +        
Sbjct: 314 KHYDLSQPFTRISVFDSILHF-----NPDISAEALADEQAARQIAEHLDIPLKDGYGLGK 368

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +   I  + +E    ++  T +  YP   S LA    ++P  T RFE +    E+ N   
Sbjct: 369 VHIEIFEKTVEHR--LDQPTFITEYPTEVSPLARRNDSNPMVTDRFEFFVGGREIANGFS 426

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL D  +Q  RF  +++EK    +E    D D++A L   +P ++G  +G DRLVML + 
Sbjct: 427 ELNDAEDQAERFLAQVKEKAAGDDEAMHYDADYVAALEYGLPPTAGEGIGIDRLVMLFSD 486

Query: 336 ANNINEVIWTPFSQSN 351
           + +I +V+  P  +  
Sbjct: 487 SPSIRDVLLFPHMRPQ 502


>gi|313675358|ref|YP_004053354.1| lysyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312942056|gb|ADR21246.1| lysyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 576

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 98/381 (25%), Positives = 166/381 (43%), Gaps = 40/381 (10%)

Query: 1   MHQIP------------SQP--WWNRDFHYRRR-----------PFLLKRNMIQSSLREY 35
           +  +P             +   + + +  YR+R               KR  + +S+R +
Sbjct: 141 LRPLPITKETTDEQGNVKRHDAFTDSEQRYRQRYVDMIVNPEVRETFRKRTQLVNSMRTF 200

Query: 36  FVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEE 95
             +  ++E+++  LQ   G     R F T     + +   LYL+ + E   K+L+  G +
Sbjct: 201 LGDRGYLEVETPILQPLYGGAA-ARPFKTH---HNTLDMTLYLRIANELYLKRLIVGGYD 256

Query: 96  KIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSF 154
            +F FA  +RN      H PEFT +E Y A++ YE +M     ++   A  +        
Sbjct: 257 GVFEFAKDFRNEGMSRFHNPEFTQVELYVAYKDYEWMMNLVEEMVEKVAMDIHGTTEVKV 316

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
                N     +  T+ EA   +  ID+          +   L   AQ+  + V      
Sbjct: 317 GENIINFQRPWKRYTMYEAIEHFTGIDISEM-------NEEELRKTAQKLHVPVDDSMGK 369

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
             +   I  EK E    +   T +  YP   S LA  +P      +RFE      E+CNA
Sbjct: 370 GKLIDEIFGEKCEAQ--LIQPTFITDYPIEMSPLAKKHPTKEGLVERFEAICNGKEICNA 427

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLV 333
             EL DPI+QR RFE++++  K+  +E   +DEDFL  L   MP ++G+ +G DRL M++
Sbjct: 428 FSELNDPIDQRQRFEEQLELGKRGDDEAMVLDEDFLRALEYGMPPTAGLGIGIDRLSMIM 487

Query: 334 TGANNINEVIWTPFSQSNQEE 354
           T +N+I +V++ P  +  ++ 
Sbjct: 488 TNSNSIQDVLFFPQMKPEKKA 508


>gi|288905716|ref|YP_003430938.1| lysyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306831812|ref|ZP_07464968.1| lysine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325978748|ref|YP_004288464.1| lysyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732442|emb|CBI14014.1| lysyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304426010|gb|EFM29126.1| lysine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325178676|emb|CBZ48720.1| lysyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 496

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 154/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETKYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDGLGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G EK++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQDMDMVLRIALELHLKRLIVGGMEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  ++ +M     II+ A++  N     S+Q          +
Sbjct: 260 GMDVTHNPEFTMIELYEAYADFKDIMDITEGIIQHASKAVNGDGPISYQGTEIAIDQPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +              A++  + V    T    I +    E 
Sbjct: 320 RVHMVDAIKEVTGVDFWKEMT------LEEAQAIAKEKNVPVEKHFTSVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVEVSPLAKKNAEDPRFTDRFELFIMTKEYGNAYSELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|326562874|gb|EGE13161.1| lysyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 507

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 159/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +  + +F+E+++ 
Sbjct: 152 LRPLPDKFHGLTDTEVKYRKRYLDLMVNEETRNTFAIRAKVVAGIRAFLTQERFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   LYL+ +PE   K+L+  G +++F     +RN 
Sbjct: 212 MMHVIPGGAS-ARPFVTH---HNALDMQLYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++   A  +      S+Q    +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMALTERMLETLAMDILGSTDVSYQGEVFSFKGPFK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ-QAGIRVAHDDTWSDIFSRILIEK 225
            IT+ +A   Y      +     D  DR  L    + +    V        + + +  E 
Sbjct: 328 KITMFDAILEY-----NSDFSADDINDREFLAKFVKDELKQEVKPSFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE++    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITEYPAETSPLARRNDTNPHVTDRFEMFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  ++ EK    +E    D DF+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 441 ERFRAQVAEKDAGDDEAMHYDADFIEALEYGLPPTAGEGIGIDRLVMLFADAASIRDVIL 500

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 501 FPHMRHK 507


>gi|113867187|ref|YP_725676.1| lysyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123134219|sp|Q0KCG3|SYK_RALEH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|113525963|emb|CAJ92308.1| Lysyl-tRNA synthetase (class II) [Ralstonia eutropha H16]
          Length = 514

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 156/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    SSLR +  +  F+E+++ 
Sbjct: 155 LRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTNAISSLRRHMADAGFMEVETP 214

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++++ +PE   K+L+  G E++F     +RN 
Sbjct: 215 MLHPIPGGAA-AKPFITH---HNALDMQMFMRIAPELYLKRLIVGGFERVFEINRNFRNE 270

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    ++IR AA  A    + ++Q+   +      
Sbjct: 271 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEDLIRKAAIDARGSAVLTYQDRELDLSKPFH 330

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  ++A         +    D   L  + ++ G+        +     + +   
Sbjct: 331 RLTICQAIQKFA-----PQYTDAQLADAGFLRTELKKFGVNTNAPQFLNAGLGTLQLVLF 385

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA      P  T+RFEL+    E+ N   EL D  +Q
Sbjct: 386 EETAENQLWEPTFIVDYPVEVSPLARASDTVPGITERFELFITGREIANGFSELNDAEDQ 445

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI
Sbjct: 446 ADRFRKQVEQKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVI 505

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 506 LFPHLRRE 513


>gi|212550983|ref|YP_002309300.1| lysyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|254782469|sp|B6YRR7|SYK_AZOPC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|212549221|dbj|BAG83889.1| lysyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 500

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 101/374 (27%), Positives = 163/374 (43%), Gaps = 35/374 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR  I +S+R +F E  
Sbjct: 137 LRPLPIVKSKDGMTYDSYNDVELRYRQRYVDLIVNEGTKDIFLKRTKIFNSVRSFFNEKG 196

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           +IE+D+  LQ  PG     R F T     + +  P YL+ + E   K+L+  G E ++ F
Sbjct: 197 YIEVDTPVLQSIPGGAA-ARPFVTH---HNALDIPCYLRIANELYLKRLIVGGFEGVYEF 252

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNC 159
           +  +RN     +H PEFT++E Y +++ Y+ +M     ++     E+             
Sbjct: 253 SRNFRNEGIDKVHNPEFTVVEVYVSYKDYKWMMNFTEQMLEHICIEILGSTELKIGEYII 312

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           N  +    IT+ +       +++          + + L    +   I      +   +  
Sbjct: 313 NFKAPYRRITMIDVIEENTGVNIAGM-------NENQLREVCRFLHIEEDKTMSSGKLID 365

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  +K E        T +  YP   S L   +  +   T+RFEL     EL NA  EL 
Sbjct: 366 EIFGKKCEWKY--IQPTFIIDYPKEMSPLCKCHRQNAELTERFELIVNGFELANAYSELN 423

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+QR RFE +++  KK  NE   ID+DFL  L   MP +SG+ +G DRLVML+T   +
Sbjct: 424 DPIDQRKRFEDQLKLSKKGDNEAMFIDQDFLRALEYGMPPTSGMGIGMDRLVMLLTKQTS 483

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 484 IQEVLLFPHMRPEK 497


>gi|81429206|ref|YP_396207.1| lysyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123769667|sp|Q38V83|SYK_LACSS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|78610849|emb|CAI55901.1| Lysyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 505

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 166/369 (44%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R               KR+ I S++REY   + F E+++ 
Sbjct: 145 LRPLPDKYHGLTNVEQIYRQRYLDLIANPESMDRFTKRSKIISAVREYLDTHDFTEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 205 VLHGQAGGAS-ARPFITH---HNALDINLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ +M +   IIR AA         S+Q    +  S+  
Sbjct: 261 GIDTKHNPEFTMLETYAAYFDYKDVMDETEGIIRFAAHKVLGTGQISYQGQAIDLDSDFA 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +              A Q  ++         I +    E +
Sbjct: 321 RVHMVDAIKAETGVDFWQPMTV------ESARELADQHHVKYEEYWQVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT R+EL+    E  NA  EL DPI+QR 
Sbjct: 375 EDT--LVQPTFIYGHPVEISPLAKKNAEDDRFTDRWELFMHGNEYANAFTELNDPIDQRE 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +E++   +E   IDED++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 433 RFEAQAKERENGNDEAEGIDEDYVEALEYGMPPTGGLGIGIDRLVMLLTDAASIRDVLLF 492

Query: 346 PFSQSNQEE 354
           P  + +++E
Sbjct: 493 PTMRPDKQE 501


>gi|189502577|ref|YP_001958294.1| lysyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189498018|gb|ACE06565.1| hypothetical protein Aasi_1242 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 502

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 102/373 (27%), Positives = 164/373 (43%), Gaps = 35/373 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R               KR  +  ++R+Y     
Sbjct: 142 LRPLPVVKEDDKQVYDAFTDPEQRYRQRYVDLLVTPTTRSIFQKRTQMIQAIRQYLNSQG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ   G  +  R F T     + +   LYL+ + E   K+L+  G E ++ F
Sbjct: 202 YDEVETPILQPLYGGAS-ARPFKTH---HNTLDMSLYLRIANELYLKRLIVGGYEGVYEF 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNC 159
           A  +RN      H PEFTMLE Y A++ Y+ +M     ++   A  +             
Sbjct: 258 AKDFRNEGMSRFHNPEFTMLELYVAYKDYKWMMNLTEELLEQVALHLYGTTAVPVGTHTI 317

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     +  T+ EA   +  ID+        Q +   L   A    + +      + I  
Sbjct: 318 DFKRPWKRFTMFEAIQHFTGIDIS-------QMEELELRKAAATLSVPLEASAGKAKIID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I   K EPN  +   T +  YP   S LA  +  +P   +RFE+     E+CNA  EL 
Sbjct: 371 EIFGAKCEPN--LIQPTFITDYPVEMSPLAKQHRDNPTLVERFEVICNGKEICNAFSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPIEQR RFE+++Q  ++   E   +DEDFL  L   MP ++G+ +G DRL M++T A +
Sbjct: 429 DPIEQRKRFEEQLQLGQRGDEEAMMLDEDFLRALSYGMPPTAGLGIGIDRLAMIMTNAPS 488

Query: 339 INEVIWTPFSQSN 351
           I EVI+ P  +  
Sbjct: 489 IQEVIFFPQMRPE 501


>gi|160885236|ref|ZP_02066239.1| hypothetical protein BACOVA_03235 [Bacteroides ovatus ATCC 8483]
 gi|237714790|ref|ZP_04545271.1| lysyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262406935|ref|ZP_06083484.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294644119|ref|ZP_06721895.1| lysine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294805685|ref|ZP_06764565.1| lysine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|156109586|gb|EDO11331.1| hypothetical protein BACOVA_03235 [Bacteroides ovatus ATCC 8483]
 gi|229445115|gb|EEO50906.1| lysyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262355638|gb|EEZ04729.1| lysyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292640538|gb|EFF58780.1| lysine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294447101|gb|EFG15688.1| lysine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 575

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 91/360 (25%), Positives = 148/360 (41%), Gaps = 27/360 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              LKR  +  +LR    E  + E+++  LQ   G 
Sbjct: 157 DSFEDPELRYRQRYVDLVVNDGIKETFLKRATVVKTLRNVLDEAGYTEVETPILQSIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++       N            +  +    + + +A 
Sbjct: 273 EFTCMELYVQYKDYNWMMNFTEKLLERICIAVNGCTESVVDGKTISFKAPYRRLPILDAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEKIEPNLGIN 233
                 DL              +    ++  +  +        +   I  E  E      
Sbjct: 333 KEKTGYDLNG-------KSEEEIRQVCKELKMEEIDETMGKGKLIDEIFGEFCEGTY--I 383

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DP++Q  RF+++M+
Sbjct: 384 QPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPLDQEERFKEQMR 443

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   I EV++ P  +  +
Sbjct: 444 LADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFPQMRPEK 503


>gi|109897686|ref|YP_660941.1| lysyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|109699967|gb|ABG39887.1| lysyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 517

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 162/379 (42%), Gaps = 35/379 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I + +R +  E +F+E+++ 
Sbjct: 139 LRPLPEKFHGLADQETKYRQRYVDLITNQQTRETFMIRSKIVTGIRNFLSERKFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  + F+T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MLQVIPGGAT-AKPFNTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------- 158
                H PEFTMLE+Y+A+  Y+ LM     ++R  A+           +          
Sbjct: 255 GLSTRHNPEFTMLEFYQAYADYQDLMNLTEEMLRTVAQDVLGTAIVKNTIKDTEGNVVEE 314

Query: 159 --CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDT 213
              +     + +T++EA  +Y        +++P+      L   A+Q  I+         
Sbjct: 315 KTYDFGQPFQRLTMSEAVIKYWPEANVAAINDPE-AHLDELKAMAKQLHIKEPEVDGIWG 373

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
                  I     E    ++  T +  YP   S LA     +   T RFE +    EL N
Sbjct: 374 AGKYLCEIFEATAEEQ--LDQPTFITAYPWEVSPLARRNDDNHFVTDRFEFFVGGRELAN 431

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              EL D  +Q  RF K++ EK    +E    D+D++  L   +P ++G  +G DRLVML
Sbjct: 432 GFSELNDSEDQEARFRKQVAEKDAGDDEAMHFDDDYIRALEYGLPPTAGEGIGIDRLVML 491

Query: 333 VTGANNINEVIWTPFSQSN 351
            T +  I +VI  P  +  
Sbjct: 492 FTDSPTIKDVILFPHMKPE 510


>gi|323693201|ref|ZP_08107419.1| lysyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323502684|gb|EGB18528.1| lysyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 644

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I   +R +     F+E+++ 
Sbjct: 144 LQILPEKFHGLTNTDMRYRQRYVDLIMNPEVRDTFVKRSRIIKEVRNFLDGRGFMEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F+T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 204 MLVPNAGGAA-ARPFTTHY---NALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M+    + R  A+         +  V  +     E
Sbjct: 260 GVDTRHNPEFTLMELYQAYTDYYGMMELVETMFREVAKKVLGTAKLIYDGVEIDLEKPFE 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y  ID      + +          A Q  I         DI S +  E +
Sbjct: 320 RITMVDALKKYKGIDFTQIKTDEE------AKALADQYHIEYEARHKKGDILSMLFEEFV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P +T+RFEL+    E+ NA  EL DP++Q  
Sbjct: 374 EEH--LVQPTFILDHPIEISPLTKKKPENPDYTERFELFITKREMANAYSELNDPLDQIE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +         E   +DEDF+  L   MP + GI +G DR +ML+T +  I +V+  
Sbjct: 432 RFKAQEALLAAGDEEANSMDEDFVNALMVGMPPTGGIGIGMDRFIMLLTDSYAIRDVLLF 491

Query: 346 PFSQS 350
           P  ++
Sbjct: 492 PTMKT 496


>gi|109946976|ref|YP_664204.1| lysyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123066312|sp|Q17YS1|SYK_HELAH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|109714197|emb|CAJ99205.1| lysyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
          Length = 501

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 163/366 (44%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I                L     + GI+V  + T   + +      +E  
Sbjct: 317 YLDALETIGGI------SKEILEKEDKLLAYLLEQGIKVEPNLTHGKLLAEAFDRFVEHQ 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LIHPTFVTEYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|116617530|ref|YP_817901.1| lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272269|sp|Q03Z44|SYK_LEUMM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116096377|gb|ABJ61528.1| Lysyl-tRNA synthetase (class II) [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 495

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I S++R Y   N F+E+++ 
Sbjct: 142 LRPMPDKFHGISDVETRYRKRYLDLIANEDSFKKFQERSHIISAIRAYMDRNDFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   +Y++ + E   K+L+  G E+++     +RN 
Sbjct: 202 ILQTEAGGAA-ARPFITH---HNALNIDMYMRIATELYLKRLVVGGMERVYEIGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  +  +M +   I + AA V +     ++Q    +  ++  
Sbjct: 258 GMDPKHNPEFTTMESYAAYMDFTDVMDETEGIFKAAASVVSDDLKITYQGTEIDLGTKFA 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +       ID    +   +          A    ++         I +    E +
Sbjct: 318 RKHLVDLIKEQTGIDFWQEMSVEE------AQKLADDNHVKYEKYWGVGHIINAFFEEFV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EDT--LVQPTFVYGHPVEVSPLAKKNTDDPRFTDRFELFIMGSEYANAFTELNDPIDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  E++   +E   IDEDF+  L   MP + G+ +G DRLVML+T ++ I +V+  
Sbjct: 430 RFEAQAAERENGNDEAEGIDEDFIEALEYGMPPTGGLGVGIDRLVMLLTDSDTIRDVVLF 489

Query: 346 PFSQSN 351
           P  +  
Sbjct: 490 PTMRPE 495


>gi|282878253|ref|ZP_06287049.1| lysine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299671|gb|EFA92044.1| lysine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 595

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 90/375 (24%), Positives = 155/375 (41%), Gaps = 35/375 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              L+R  +  ++R+   E  
Sbjct: 161 LKPLPIVKYKDGVAYDKFDDPELRYRQRYVDLIVNDGVKDTFLQRATVLRTMRKVLDEAG 220

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 221 YTEVETPTLQAIAGGAS-ARPFVTHF---NALNTDMYMRIATELYLKRLIVGGFEGVYEI 276

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNC 159
              +RN      H PEFT +E Y  ++ Y  +M     ++       N            
Sbjct: 277 GKNFRNEGMDRNHNPEFTCMELYVQYKDYNWMMAFTEKLLETICIAVNGSAEREIDGQMI 336

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    + + +A       DL        +     +    ++  + V        +  
Sbjct: 337 SFKAPYRRLPILDAIKEKTGYDLN-------EKTEDEIREICKKLDMEVDESMGKGKLID 389

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 390 EIFGEFCEGT--FIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 447

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++M+   K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 448 DPIDQEERFKEQMKLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKTF 507

Query: 339 INEVIWTPFSQSNQE 353
           I EV++ P  +  ++
Sbjct: 508 IQEVLFFPQMKPEKK 522


>gi|296158327|ref|ZP_06841158.1| lysyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295891271|gb|EFG71058.1| lysyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 527

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 156/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R    SS+R++  +  F+E+++ 
Sbjct: 168 LRPLPDKFHGLSDQEMKYRQRYVDLIVTPETRKTFVARTRAISSIRKFMADADFMEVETP 227

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F+T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 228 MLHPIPGGAA-AKPFTTH---HNALDMQMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 283

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +       ++Q    +      
Sbjct: 284 GVSVRHNPEFTMIEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATITYQGRELDLAKPFH 343

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         N    D   L  + ++ G+  +     +     + +   
Sbjct: 344 RLTITQAIQKYA-----PQYTNEQLADSAFLRTELKKFGVDASQPQFLNAGVGALQLALF 398

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 399 EETAESQLWEPTYIIDYPIEVSPLARASDKVDGITERFELFITGREIANGFSELNDPEDQ 458

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++ +K     E    D D++  L   MP + G  +G DRLVML+T + +I +VI
Sbjct: 459 AARFRKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMLLTDSPSIRDVI 518

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 519 LFPHLRRE 526


>gi|295425663|ref|ZP_06818350.1| lysine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064679|gb|EFG55600.1| lysine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 516

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  ++R+Y  +  F+E+++ 
Sbjct: 142 LRPLPDKYHGLKDVEQIYRQRYLDLITNRESYMRFVHRTQIIQAIRDYLNKRDFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GLDTHHNPEFTELESYAAYWDFHDVMDEAEGIIRAAAKVVSPDGKITYQGQDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    + + +          A+   I          I +    +  
Sbjct: 318 RVHMVDLIKEKTGVDFWKPMTDEE------AKKIAEDHDIHCESYWKVGHIINAFFEKYC 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE+Y    E  NA  EL DP +QR 
Sbjct: 372 EKT--IVDPTFVYGHPVEISPLAKKTADDPRFTDRFEIYIMGEEYGNAFSELNDPDDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEAQMAERDAGNDEADMIDEDYLRAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSN 351
           P  +  
Sbjct: 490 PTMRPE 495


>gi|24640851|ref|NP_727353.1| Lysyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|320541906|ref|NP_001188571.1| Lysyl-tRNA synthetase, isoform C [Drosophila melanogaster]
 gi|22832014|gb|AAF46510.2| Lysyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|318069350|gb|ADV37653.1| Lysyl-tRNA synthetase, isoform C [Drosophila melanogaster]
          Length = 607

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R                R  I S +R++     F+EI++ 
Sbjct: 226 LHMLPHLHFGLKDKETRYRQRYLDLILNNNVREKFQIRAKIISYVRQFLDRLGFLEIETP 285

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+++ +PE   K L+  G ++++     +RN 
Sbjct: 286 MMNMIAGGAT-AKPFVTH---HNDLKMDLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNE 341

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  +M     ++    +          +           
Sbjct: 342 GIDLTHNPEFTTCEFYMAYADYADIMDITEQLVSGMVKAIRGSYKVIYHPEGPEGPEQEL 401

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +       +                L     +  +      T + +  
Sbjct: 402 DFTPPFKRVSMIKTLEEKLQVKFPAADTFNSPETNQFLSQLCAKHQVECPAPRTTARLLD 461

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 462 KLVGEFIEEFCV--NPTFICEHPQIMSPLAKYHRSIPGLTERFELFVAKKEICNAYTELN 519

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 520 DPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRLAMFLTDSNN 579

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 580 IKEVLLFPAMKPE 592


>gi|241763859|ref|ZP_04761904.1| lysyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366903|gb|EER61317.1| lysyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 514

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 161/368 (43%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   S +R++ V++ F+E+++ 
Sbjct: 157 LRPMPDKFHGVADQEVKYRQRYVDLMTDEAARKRFVARSKAVSGIRDFMVQHGFLEVETP 216

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + +YL+ +PE   K+LL  G E++F     +RN 
Sbjct: 217 MLHPIPGGA-NAKPFVTH---HNALEQEMYLRIAPELYLKRLLVGGFERVFEINRNFRNE 272

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y+ LM     ++R  A + A     ++Q    +      
Sbjct: 273 GISVRHNPEFTMMEFYAAYWNYQDLMGFTEQLVRDAALKAAGTLQLTYQGREVDLAQPFA 332

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y               D   L    ++ G+    D   +   + + +   
Sbjct: 333 RLTIREAIFQYTE-------AGAHVDDAAWLISALKKLGMNEEKDKLSARSLASLQVLYF 385

Query: 227 EPNLGI--NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E  +       T +  +P   S LA    A P  T+RFELY    E  N   EL D  +Q
Sbjct: 386 EETVEDKLWQPTFIMEHPTEISPLARANDARPEVTERFELYITGREFGNGFSELNDAEDQ 445

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  ++  K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 446 AARFHAQVAAKDSGDDEAMYFDHDFVRALEYGMPPAGGCGIGIDRLMMLLTDSPSIRDVI 505

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 506 LFPALRRE 513


>gi|241953821|ref|XP_002419632.1| lysine-tRNA ligase, putative; lysyl-tRNA synthetase, cytoplasmic,
           putative [Candida dubliniensis CD36]
 gi|223642972|emb|CAX43228.1| lysine-tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 594

 Score =  325 bits (833), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 82/373 (21%), Positives = 152/373 (40%), Gaps = 29/373 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P++ +  +D    YR+R                R+ I   +R++     F+E+++ 
Sbjct: 215 LHMLPTEHYGFKDQEARYRKRYLDLIMNDSSRDRFKVRSKIIQYIRKFLDNRDFVEVETP 274

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  + F+T     + +   ++++ +PE   K+L+  G ++++     +RN 
Sbjct: 275 ILNVIAGGAT-AKPFTTH---HNDLNMEMFMRIAPELFLKELVVGGMDRVYEIGRQFRNE 330

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y+A+     LM     +     +          +           
Sbjct: 331 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGDYVIKYHPEGPSGKELTL 390

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I + E   +  N+                L    +   +  A   T + +  
Sbjct: 391 DFSRPWKRINMIEELEKVYNVKFPAGDQLHTAETGEFLKKVLKDNNLECAPPLTNARMLD 450

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL 
Sbjct: 451 KLVG---ELEDASINPTFIFGHPQMMSPLAKKDRNIPGLCERFEVFVATKEICNAYTELN 507

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE++ ++K +  +E   IDE F   L   +P ++G   G DRL M +T +N 
Sbjct: 508 DPFDQRARFEEQARQKAQGDDEAQMIDETFCNALEYGLPPTAGWGCGIDRLAMFLTDSNT 567

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 568 IREVLLFPTLKPD 580


>gi|220903895|ref|YP_002479207.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868194|gb|ACL48529.1| lysyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 503

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 159/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +    +D    YR+R               KR+ I    R +  ++ F+E+++ 
Sbjct: 148 MRPLPEKYHGLKDMETRYRQRYVDLIVTPRAREIFFKRSQIVREFRHFMEDHGFMEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G     + F T     + +   LY++ +PE   K+LL  G EK+F     +RN 
Sbjct: 208 MMQPLAGGAA-AKPFKTH---HNALDMGLYMRIAPELYLKRLLVGGFEKVFELNRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--P 165
                H PEFTM E+Y A+ ++E LM     +    A+                 +    
Sbjct: 264 GIDTRHNPEFTMCEFYWAYATFEDLMDLTEKLFAHLAQTVCGTTVVPYQGEMIDLTPGKW 323

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             ++  ++                   D   +    +Q G + A  ++   + +++    
Sbjct: 324 TRMSFYDSLTVIGG------HQPEFYNDYSRVQNYIRQRGEKAADSESLQKLHAKLFDLD 377

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +     +  YP   S L+     DP  T RFEL+    E+ NA  EL DP++QR
Sbjct: 378 VEGK--LVQPHFIYHYPTEISPLSRRNDNDPALTDRFELFITGREISNAFSELNDPVDQR 435

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +++EK+   +E + +DED+L  L   MP ++G  +G DRLVML+T + +I EVI 
Sbjct: 436 LRFEDQVREKEAGDDEAHSMDEDYLRALEYGMPPAAGQGVGIDRLVMLLTDSASIREVIL 495

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 496 FPLLRPE 502


>gi|302845072|ref|XP_002954075.1| hypothetical protein VOLCADRAFT_76143 [Volvox carteri f.
           nagariensis]
 gi|300260574|gb|EFJ44792.1| hypothetical protein VOLCADRAFT_76143 [Volvox carteri f.
           nagariensis]
          Length = 641

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 155/374 (41%), Gaps = 30/374 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H  PS  +  +D    YR+R                R+ I   +R +     F+E+++ 
Sbjct: 268 LHMPPSAHFGLKDQETRYRQRYLDLIVNTDVRNIFYTRSRIIQFVRRFLDTRGFLEVETP 327

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   LY++ +PE   K L+  G E+++     +RN 
Sbjct: 328 MMNMIPGGAA-ARPFITH---HNDLDMKLYMRIAPELFLKMLVIGGLERVYEIGRQFRNE 383

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y+A+  Y+ L+    ++I               +           
Sbjct: 384 GIDLTHNPEFTTCEFYQAYADYKDLLGMTESLISQMVLEIKGSYKIQYHPEGPEKPSIEI 443

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++         I L T L++ +   R LL     +  +      T + +  
Sbjct: 444 DFTPPWRRISMVSGLEECLGIKLPTDLESEEA--RQLLIDLCAKHDVNCPAPQTTARLLD 501

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  +   P  T+RFEL+    E+CNA  EL 
Sbjct: 502 KLVGEFLEEQCV--NPTFICDHPQLMSPLAKWHRELPNMTERFELFINKREVCNAYTELN 559

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+QR  F+ + + K    +E   IDE F   L   +P + G  +G DR+ ML+T   N
Sbjct: 560 DPIKQRELFQDQAKAKSAGDDEAMFIDETFCTALEYGLPPTGGWGLGIDRMTMLLTDTCN 619

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 620 IKEVLLFPAMKPEE 633


>gi|299472298|emb|CBN79710.1| Lysyl-tRNA ligase [Ectocarpus siliculosus]
          Length = 849

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 83/373 (22%), Positives = 155/373 (41%), Gaps = 30/373 (8%)

Query: 1   MHQIPSQPWWNR--DFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+     +  +  YR+R                R+ + + +R +  E  F+E+++ 
Sbjct: 197 LHMLPNSREGLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETP 256

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 257 MMNMVAGGAT-AKPFVTH---HNDLNLDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNE 312

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV-------NCN 160
                H PEFT  E+Y+A+  YE LM     +I    +           +         +
Sbjct: 313 GIDLTHNPEFTTCEFYQAYADYEDLMSMTEQMISGMVKKICGSFKIKYQLNPGEDPLEVD 372

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  +++ +       + L    D         L     + G+  A   T + +  +
Sbjct: 373 FTPPFRRVSMMDGLEEVLKVKLPALDDPEID---GKLQALLTEHGLECAPPLTTARLLDK 429

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           ++ + +E        T +  +P   S LA  + + P  T+RFEL+ C  ELCNA  EL +
Sbjct: 430 LVGDFLEDKCVH--PTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNN 487

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P+ QR RF  + +      +E    DE+F   +   +P ++G  +G DRL M ++  NNI
Sbjct: 488 PMVQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNI 547

Query: 340 NEVIWTPFSQSNQ 352
            EV+  P  +  +
Sbjct: 548 KEVLLFPAMKPEE 560


>gi|296272467|ref|YP_003655098.1| lysyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096641|gb|ADG92591.1| lysyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 504

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 84/369 (22%), Positives = 156/369 (42%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S  R +F    F+E+++ 
Sbjct: 141 ISPLPEKYHGIQDKELRYRQRYLDLIMNSEVRKTFHVRSKVISLTRRFFESKGFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G   + + F+T     + +    +L+ +PE   K+L+  G E +F     +RN 
Sbjct: 201 MMHPIAGGA-NAKPFTTH---HNALGVDRFLRIAPELYLKRLIVGGFEAVFEINRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+++Y+ L+           E  +             F++   
Sbjct: 257 GMDATHNPEFTSIEFYWAYKTYKDLIALTKEYFEYLFENLDLPTNLPYGEVEIDFNKFSE 316

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I + ++      +            D+  +    ++  + V        +   +  E +E
Sbjct: 317 IPLIQSLYEIGGVPQDIV------EDKDKIIAFMKEKNLEVNESMNIGQLQGELFDEYVE 370

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA         T RFEL+    E+ NA  EL DP++Q  R
Sbjct: 371 EK--LINPTFITEYPVEISPLARRNDEKTHLTDRFELFIAGKEIANAFSELNDPLDQLGR 428

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE +M  K    +E + +DEDF+  L   M  ++G  +G DRLVM++T  ++I +V+  P
Sbjct: 429 FEAQMAAKDSGDDEAHEMDEDFVNALSYGMAPTAGQGIGIDRLVMMLTNQHSIRDVLLFP 488

Query: 347 FSQSNQEEI 355
             +  ++EI
Sbjct: 489 AMKPAKQEI 497


>gi|259650774|dbj|BAI42936.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 499

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 157/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR  I S++REY   + F+E+++ 
Sbjct: 147 LRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVREYLDNHGFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 207 VLHNQAGGA-NARPFITH---HNALDIDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+     +M +   I R AA         ++Q ++ +  +   
Sbjct: 263 GIDTKHNPEFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLTYQGMDIDLDAPFA 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +              A    +          I S    + +
Sbjct: 323 RINMLDAIKDKTGVDFWPEMSV------DEARKLADDHEVHYEPYWKVGHIISAFFDQFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRF +RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EST--LIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGGEYANAFTELNDPIDQRQ 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  EK     E   ID+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEAQAAEKTAGNEEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 494

Query: 346 PFSQS 350
           P  + 
Sbjct: 495 PTLRP 499


>gi|309366534|emb|CAP21280.2| CBR-KARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 598

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 90/374 (24%), Positives = 158/374 (42%), Gaps = 29/374 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R+ I + LR Y     F+E+++ 
Sbjct: 216 LHMLPHSHFGLKDKELRFRKRYLDLILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETP 275

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K L+  G ++++     +RN 
Sbjct: 276 IMNQIAGGAT-AKPFITH---HNDLDMNLFLRVAPELYHKMLVVGGIDRVYEVGRLFRNE 331

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y A+  YE +++   +++               +           
Sbjct: 332 GIDLTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVLAIKGTYKIEYHPNGPNTEPVYE 391

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +     + + + E  A   N  L        +  R       +   +  +   T + + 
Sbjct: 392 VDFTPPFKRVNMYEGLAEKLNTKLPDPSTLDTEEARQTFDKLCRDNNVDCSEPRTTARLL 451

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++ E +E        T L  +P   S LA  + + P  T+RFEL+A   E+ NA  EL
Sbjct: 452 DKLVGEYLEST--FISPTFLIGHPQIMSPLAKWHRSIPGLTERFELFAVTREIANAYTEL 509

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI QR RFE++ ++K    +E   IDE F   L   +P + G  MG DRL M++T  N
Sbjct: 510 NDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEYGLPPTGGWGMGIDRLSMILTDNN 569

Query: 338 NINEVIWTPFSQSN 351
           NI EV+  P  +  
Sbjct: 570 NIKEVLLFPAMRPE 583


>gi|148653258|ref|YP_001280351.1| lysyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|229559862|sp|A5WFG0|SYK_PSYWF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148572342|gb|ABQ94401.1| lysyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 510

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 167/365 (45%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     + +  YR            R   + R+ + S +R++ +  +F+E+++ 
Sbjct: 154 LRPMPNKFHGLADTEARYRNRHLDLMTNESSRNTFMIRSQVISGIRKFMLNERFMEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +  PLYL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 214 MMHPIPGGAV-ARPFITH---HNALDMPLYLRIAPELYLKRLVVGGFERVFEINRSFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     +  + A ++      ++Q    +  +   
Sbjct: 270 GVSTRHNPEFTMIEFYQAYADYKDLMDLTERLFNQLAMDILGTTELTYQEETISLKAPFA 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ-AGIRVAHDDTWSDIFSRILIEK 225
            +++ +A A+YA        D     DR  L   AQ     +V        + + I  E 
Sbjct: 330 RLSMTDAIAQYA-----EGFDMSKVADRDYLADYAQNVLKQQVKEGFGIGKLQTIIFEET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T + +YPA  S LA     +P  T RFEL+    E+ N   EL DP +Q 
Sbjct: 385 AEHK--LRQPTFITQYPAETSPLARRNDENPEITDRFELFIGGREIANGFSELNDPADQA 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  ++ EK    +E    D D++  L   +P ++G  +G DRLVML T A +I +VI 
Sbjct: 443 ERFHNQVAEKDAGDDEAMHFDADYIEALAYGLPPTAGEGIGIDRLVMLFTDAASIRDVIL 502

Query: 345 TPFSQ 349
            P  +
Sbjct: 503 FPHMR 507


>gi|324507490|gb|ADY43176.1| Lysyl-tRNA synthetase [Ascaris suum]
          Length = 578

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 89/378 (23%), Positives = 166/378 (43%), Gaps = 29/378 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +  +  +  YR R              + R  + + LR Y     F+E+++ 
Sbjct: 195 LHMLPHTHFGLKNQETRYRMRYLDLIMNPSVKDKFVIRAKMITFLRRYLDNLGFLEVETP 254

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K L+  G ++++     +RN 
Sbjct: 255 MMNQIAGGAT-AKPFITH---HNELDMDLFLRVAPELYHKMLVVGGIDRVYEVGRLFRNE 310

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y A+  YE L+K   +++       +       +          +
Sbjct: 311 GIDQTHNPEFTTCEFYMAYADYEDLIKLTEDLLSKMVFAIHGTYKIQYHPNGAGTEPVYD 370

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +     + + + E   +   + L T           ++   A + G+      T + + 
Sbjct: 371 IDFTPPFKRVNMYEGLEKALGMKLPTPDTLDTAEANAVIDKIALERGVECPPPRTTARLL 430

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++ E +E        T L  +P   S L+  + + P  T+RFEL+    E+ NA  EL
Sbjct: 431 DKLVGEYLES--DFISPTFLVGHPQIMSPLSKWHRSIPGLTERFELFVVTKEIVNAYTEL 488

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP+ QR RFE++ ++K+   +E   IDE+F   L   +P ++G  MG DRL M+ T +N
Sbjct: 489 NDPLAQRQRFEQQAKDKQAGDDEAQLIDENFCTALEYGLPPTAGWGMGIDRLTMVFTDSN 548

Query: 338 NINEVIWTPFSQSNQEEI 355
           NI EV++ P  +  ++++
Sbjct: 549 NIKEVLFFPAMRPEEQKV 566


>gi|154484001|ref|ZP_02026449.1| hypothetical protein EUBVEN_01709 [Eubacterium ventriosum ATCC
           27560]
 gi|149735043|gb|EDM50929.1| hypothetical protein EUBVEN_01709 [Eubacterium ventriosum ATCC
           27560]
          Length = 513

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 159/364 (43%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I S +R+Y     F+E+++ 
Sbjct: 158 LQILPEKHHGLTNTDLRYRQRYLDLIMNPEVKETFIKRSKIISEIRKYLDGQGFMEVETP 217

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L ++ G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 218 MLVHNAGGAA-ARPFETHF---NALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 273

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A +V       +  +  +     E
Sbjct: 274 GVDTRHNPEFTLMELYQAYTDYHGMMDLTENLYRHLAEKVCGSAKIEYNGIEMDLSKPFE 333

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA +D        +          A++  +         DI +    E +
Sbjct: 334 RLTMVDAVKKYAGVDWN------EVETVEQARELAKEHHVEFEEHHKKGDILNLFFEEFV 387

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P +P + +RFE +    E+ NA  EL DPI+QR 
Sbjct: 388 EEH--LVQPTFIMDHPIEISPLTKKKPENPEYVERFEFFMNGWEMANAYSELNDPIDQRE 445

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ + +       E    DEDF+  L   MP + GI  G DR+ ML+T A  I +V+  
Sbjct: 446 RFKAQEELLALGDEEANTTDEDFMNALEIGMPPTGGIGFGIDRMCMLLTNAAAIRDVLLF 505

Query: 346 PFSQ 349
           P  +
Sbjct: 506 PTMK 509


>gi|15611240|ref|NP_222891.1| lysyl-tRNA synthetase [Helicobacter pylori J99]
 gi|11135067|sp|Q9ZMP8|SYK_HELPJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|4154685|gb|AAD05751.1| LYSYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 501

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 164/366 (44%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 141 PLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIPGGA-NARPFIT---YHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 257 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 316

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I  G             L     + GI+V  + T   + +      +E  
Sbjct: 317 YLDALETIGGISKGI------LEKEDRLLAYLLEQGIKVEPNLTHGKLLAEAFDHFVEHK 370

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 371 --LINPTFVTEYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 428

Query: 290 KEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 429 NQVAEKEKGDEEAQYMDEDYVWALAHEMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 488

Query: 349 QSNQEE 354
           +  + +
Sbjct: 489 RPVKND 494


>gi|255994120|ref|ZP_05427255.1| lysine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993788|gb|EEU03877.1| lysine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 507

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 167/370 (45%), Gaps = 28/370 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYF-VENQFIEIDS 46
           +  +P +    +D    YR+R               KR  I   +R Y   +  F+++D+
Sbjct: 148 LQVLPDKFKGLKDQDLRYRQRYVDLIVNDDVADTFRKRAAIIKEIRRYLEDDRGFLDVDT 207

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             L    G   + R F+T     + +   + L+ S E   K+L+  G ++++     +RN
Sbjct: 208 PVLTTIAGGA-NARPFNTH---HNTLDLDMKLRISNELYLKRLIVGGLDRVYEMGKMFRN 263

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEP 165
                 H PEFT +E Y+A+   + +M    N+I   +E  N  +  ++Q    +     
Sbjct: 264 EGMDRNHNPEFTSMELYQAYGDMDTVMDITENLIAKVSEKVNGSMKITYQGKEFDLTPPW 323

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + IT+ +A  ++AN D      + +          A++  I  A   +   I + +    
Sbjct: 324 DRITMVDAVKKWANEDFDKIQTDEE------AIEVAKKHKIENADKMSRGTIIAELFEMY 377

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E +  +     +  +P   S L+    +DPR T+RFE Y    E+ N   EL DPI+Q 
Sbjct: 378 CEDH--LEGPIFVTGHPVEISPLSKRDSSDPRITRRFEAYINCWEVANGFSELNDPIDQL 435

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ + ++     +E +P+DEDF+  L   +P + G+ +G DR++ML+T A +I +VI 
Sbjct: 436 KRFKSQQEQLDAGDDEAHPMDEDFVNALEVGLPPTGGLGIGIDRVIMLITNAASIRDVIL 495

Query: 345 TPFSQSNQEE 354
            P  +   +E
Sbjct: 496 FPTMKPLDKE 505


>gi|238926930|ref|ZP_04658690.1| lysine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238885164|gb|EEQ48802.1| lysine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 501

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 151/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR  I  S+R Y     F+E+++ 
Sbjct: 147 LRPLPEKFHGLKDVDTRYRQRYLDLMVNQEVRETFRKRTAILQSIRRYLDARDFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E S K+L+  G ++++     +RN 
Sbjct: 207 VLSTLAGGAA-ARPFVTH---HNALDIDLYLRIATELSLKRLIVGGLDRVYEMGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A   +  LM     I+R AAE                  +   
Sbjct: 263 GMDVRHNPEFTSIEIYQAFADHYDLMAITEGIVRQAAEDVLGTTKITYQGVEIDLGQVRT 322

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I++ +A       D  +                A++  +          I +    EK+E
Sbjct: 323 ISMNDAVREATGKDFLSCRTV------DEARAMAREIHVPFEERHGIGGILNAAFEEKVE 376

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +  +   T +  +P   S LA     DPR T RFE +    EL N   EL DPI+Q  R
Sbjct: 377 ES--LMQPTFITGHPTEISPLAKRNADDPRITDRFEFFIYGRELANGFTELNDPIDQEQR 434

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++ +++    E + +D D++  L   +P + G+ +G DRLVML+T + +I +V+  P
Sbjct: 435 FLDQLAQREAGDAEAHVMDHDYVTALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 494

Query: 347 FSQS 350
             + 
Sbjct: 495 TMKP 498


>gi|322378400|ref|ZP_08052854.1| lysyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380081|ref|ZP_08054337.1| lysyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147488|gb|EFX42132.1| lysyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321149156|gb|EFX43602.1| lysyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 504

 Score =  325 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 158/365 (43%), Gaps = 26/365 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R                R++I +++R +F E  F+E+++  +
Sbjct: 149 PLPEKFHGLSDIELRYRQRYLDLVVNPTVKEVFKTRSVIVATIRRFFEEKGFLEVETPMM 208

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 209 HPIAGGA-NARPFIT---YHNALEVERYLRIAPELYLKRLVVGGFEAVFEINRNFRNEGM 264

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTMLE+Y A+++YE L+     +     +V N  +          FS    ++
Sbjct: 265 DHSHNPEFTMLEFYWAYKTYEDLITLTQELFHKLLQVLNLPLKIPYQDQEIDFSAFRVLS 324

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      ++           D   L +  ++ G  +    T   + +      +E  
Sbjct: 325 FKQALIEVGGLE------AELLEDSSKLLVFLEKQGAHLEGLITHGKLLAEAFDLCVESK 378

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  YP   S LA     +P    RFEL+    E+ N   EL DP++Q  RFE
Sbjct: 379 --LINPTFITEYPIEISPLARRNDTNPAIADRFELFIAGKEIANGFSELNDPLDQYQRFE 436

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++++ K+    E   +D D++  L   MP ++G  +G DRLVML+T +  I +VI  P  
Sbjct: 437 EQVKAKESGDEEAQLMDTDYVWALGLGMPPTAGEGIGIDRLVMLLTNSKTIKDVILFPAM 496

Query: 349 QSNQE 353
           +  ++
Sbjct: 497 KPEKD 501


>gi|258509503|ref|YP_003172254.1| Lysyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257149430|emb|CAR88403.1| Lysyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 498

 Score =  325 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 157/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR  I S++REY   + F+E+++ 
Sbjct: 146 LRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVREYLDNHGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 206 VLHNQAGGA-NARPFITH---HNALDIDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+     +M +   I R AA         ++Q ++ +  +   
Sbjct: 262 GIDTKHNPEFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLTYQGMDIDLDAPFA 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +              A    +          I S    + +
Sbjct: 322 RINMLDAIKDKTGVDFWPEMSV------DEARKLADDHEVHYEPYWKVGHIISAFFDQFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRF +RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EST--LIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGGEYANAFTELNDPIDQRQ 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  EK     E   ID+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEAQAAEKTAGNEEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 493

Query: 346 PFSQS 350
           P  + 
Sbjct: 494 PTLRP 498


>gi|296113238|ref|YP_003627176.1| lysyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920932|gb|ADG61283.1| lysyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326560229|gb|EGE10617.1| lysyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326566453|gb|EGE16603.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326570260|gb|EGE20305.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326570997|gb|EGE21021.1| lysyl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326576889|gb|EGE26795.1| lysyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 507

 Score =  325 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 159/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +  + +F+E+++ 
Sbjct: 152 LRPLPDKFHGLTDTEVKYRKRYLDLMVNEETRNTFAIRAKVVAGIRAFLTQERFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   LYL+ +PE   K+L+  G +++F     +RN 
Sbjct: 212 MMHVIPGGAS-ARPFVTH---HNALDMQLYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++   A  +      S+Q    +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMALTERMLETLAMDILGSTDVSYQGEVFSFKGPFK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ-QAGIRVAHDDTWSDIFSRILIEK 225
            IT+ +A   Y      +     D  DR  L    + +    V        + + +  E 
Sbjct: 328 KITMFDAILEY-----NSDFSADDINDREFLAKFVKDELKQEVKPSFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE++    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITEYPAETSPLARRNDTNPHVTDRFEMFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  ++ EK    +E    D DF+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 441 ERFRAQVAEKDAGDDEAMHYDADFIEALEYGLPPTAGEGIGIDRLVMLFADAASIRDVIL 500

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 501 FPHMRHK 507


>gi|255531462|ref|YP_003091834.1| lysyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255344446|gb|ACU03772.1| lysyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 573

 Score =  325 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 95/376 (25%), Positives = 169/376 (44%), Gaps = 36/376 (9%)

Query: 1   MHQIPS----------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              + R+ + +++R YF   
Sbjct: 142 LKPLPIVKRDEEGNIYDGFTDPEMRYRQRYVDLTVNPGFKQIFINRSKVINTMRGYFDNQ 201

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ   G     R F+T     + +  PLYL+ + E   K+L+ AG + ++ 
Sbjct: 202 GWMEVETPILQPIHGGAA-ARPFATH---HNTLDMPLYLRIANELYLKRLIVAGFDGVYE 257

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVN 158
           F   +RN      H PEFT +E Y A++ Y  +M      +   A   + K      +  
Sbjct: 258 FGKMFRNEGMDRTHNPEFTSMEIYVAYKDYIWMMAMVEECLEKVALAIHGKPVVKVGDYE 317

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     E +T+ E+  +Y  ID+              +    +  GI + +      + 
Sbjct: 318 INFEGPYEKLTMYESIQKYTGIDVSVMT-------EEEIKTVCKSLGIEIDNSMGRGKLI 370

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             +  EK+E N  +   T +  YP   + LA  + +     +RFEL+    E+ NA  EL
Sbjct: 371 DELFSEKVEAN--LIQPTYITDYPLEMTPLAKKHRSKEGLVERFELFVMGKEIANAYSEL 428

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+QR RFE +++   +  +E   +D+DF+  L   MP +SG+ +G DRLVML+T  +
Sbjct: 429 NDPIDQRERFEDQLKLAARGDDEAMAMDDDFIRALEYGMPPTSGLGIGIDRLVMLMTDQS 488

Query: 338 NINEVIWTPFSQSNQE 353
            I EV++ P  +  ++
Sbjct: 489 TIQEVLFFPQMRPEKK 504


>gi|296111614|ref|YP_003621996.1| lysine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295833146|gb|ADG41027.1| lysine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 493

 Score =  325 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 156/364 (42%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ I S++R Y     F+E+++ 
Sbjct: 142 LRPMPDKFHGIADVETRYRKRYLDLIANEESFKKFQLRSKIISAIRAYMDSQDFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   +Y++ + E   K+L+  G E+++     +RN 
Sbjct: 202 ILQTEAGGAA-ARPFITH---HNALNIDMYMRIATELYLKRLVVGGFERVYEIGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  +  +M +   I + AA V +     ++Q    +  ++  
Sbjct: 258 GMDPKHNPEFTTMETYAAYMDFTDVMNETEGIFKAAASVVSDDLKVTYQGTEIDLGTKFA 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +       ID    +              A    ++         I +    E +
Sbjct: 318 RKHMVDLIKEQTGIDFWQDMTV------ETAQKLADDKHVKYEKYWDVGHIINAFFEEFV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EDT--LIQPTFVYGHPVSVSPLAKRNADDDRFTDRFELFIMGSEYGNAFTELNDPIDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E++   +E   IDEDF+  L   MP + G+ +G DRL+ML+T ++ I +V+  
Sbjct: 430 RFEAQVAERENGNDEAEGIDEDFIEALEYGMPPTGGLGIGIDRLIMLLTDSDTIRDVLLF 489

Query: 346 PFSQ 349
           P  +
Sbjct: 490 PTMR 493


>gi|170694747|ref|ZP_02885898.1| lysyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170140378|gb|EDT08555.1| lysyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 508

 Score =  325 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 89/368 (24%), Positives = 157/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R    SS+R++  +  F+E+++ 
Sbjct: 149 LRPLPDKFHGLSDQEMKYRQRYVDLIVTPETRKTFVARTRAISSIRKFMADAGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F+T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 209 MLHPIPGGAA-AKPFTTH---HNALDMQMFLRIAPELYLKRLVVGGFERVFEVNRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ +M     +IR AA +       ++Q    +      
Sbjct: 265 GVSVRHNPEFTMIEFYAAYTDYKWVMDFTEQLIRQAAIDALGTATITYQGRELDLAKPFH 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA         N    D   L  + ++ G+  +     +     + +   
Sbjct: 325 RLTITQAIQKYA-----PQYTNEQLADSAFLRTELKKFGVDASQPQFLNAGVGSLQLALF 379

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 380 EETAESQLWEPTYIIDYPLEVSPLARASDKVEGITERFELFITGREIANGFSELNDPEDQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++ +K     E    D D++  L   MP + G  +G DRLVM++T + +I +VI
Sbjct: 440 AARFRKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGIGIDRLVMMLTDSPSIRDVI 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPHLRRE 507


>gi|296413547|ref|XP_002836472.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630296|emb|CAZ80663.1| unnamed protein product [Tuber melanosporum]
          Length = 618

 Score =  325 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 154/365 (42%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P++ +  +D    YR+R              + R+ I S +R YF E  F+E+++ 
Sbjct: 220 LHMLPTEHFGLKDQETRYRQRYLDLIMNNSTRDIFVTRSKIVSYVRRYFDERAFVEVETP 279

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN 
Sbjct: 280 MMNAIAGGAT-AKPFITH---HNDLNMDLFMRVAPELYLKMLVVGGLERVYEIGRQFRNE 335

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     L+     ++    +       +  +         + 
Sbjct: 336 GIDLTHNPEFTTCEFYWAYADVNDLLDITEELVSEMVKCITGSYRTKFHTQGGKVYEVDW 395

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
               + I +  A                 +     L   A+  GI  +   T + +  ++
Sbjct: 396 ERPWKRIEMMTALEVATGRKFPPGDQLHTKATNEFLKEVAKAHGIECSPPLTNARLLDKM 455

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  + + P   +RFE + C  E+ NA  EL DP
Sbjct: 456 VGEFIEETC--INPTFITGHPQMMSPLAKYHRSQPGLCERFEAFVCKKEIVNAYTELNDP 513

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 514 FDQRLRFEEQANQKDQGDDEAQLIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 573

Query: 341 EVIWT 345
           EV+  
Sbjct: 574 EVLAF 578


>gi|224369336|ref|YP_002603500.1| LysS1 [Desulfobacterium autotrophicum HRM2]
 gi|223692053|gb|ACN15336.1| LysS1 [Desulfobacterium autotrophicum HRM2]
          Length = 504

 Score =  325 bits (832), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 164/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +     + +  YR+R               +R+     +R +F +  F+E+++ 
Sbjct: 150 MRPLPEKFHGIKDPEKRYRQRYLDLIMNKEARAIFTRRSKTIRLMRTFFEQRDFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G       F T     + +   L+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQPVAGGA-EATPFKT---WHNALGMELFLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+ +YE LM     + R  A      +   +Q  + +     E
Sbjct: 266 GVSTRHNPEFTMVEFYQAYATYEDLMDMTEVMFRHLALEVTGSETIQYQGDSIDFSKSWE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + E+  +   +D           DR  L   A++  I +   D    I +++    +
Sbjct: 326 RLPMMESLVKIGGVDPAI------LEDRTALRAFAEKNSINMTDQDHHGKILTKLFDLLV 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  YP   S L+    A+   T RFEL+    E+ N   E+ DP++Q  
Sbjct: 380 EPK--LIQPTFITGYPVEVSPLSRKSEANQELTDRFELFIAGREIANGFSEINDPVDQHE 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +  ++ K   E + +D D++  L   MP ++G  +G DRL+ML+T + +I EVI  
Sbjct: 438 RFLGQAAKRSKGDVEAHVMDTDYVEALEYGMPPTAGEGIGIDRLIMLLTDSASIREVILF 497

Query: 346 PFSQS 350
           P  ++
Sbjct: 498 PHMKN 502


>gi|17535925|ref|NP_495454.1| lysyl (K) tRNA Synthetase family member (krs-1) [Caenorhabditis
           elegans]
 gi|14574222|gb|AAK68395.1|U41105_14 Lysyl (k) trna synthetase protein 1, isoform b [Caenorhabditis
           elegans]
          Length = 596

 Score =  325 bits (832), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 88/374 (23%), Positives = 158/374 (42%), Gaps = 29/374 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R+ I + LR Y     F+E+++ 
Sbjct: 213 LHMLPHSHFGLKDKELRFRKRYLDLILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K L+  G ++++     +RN 
Sbjct: 273 IMNQIAGGAT-AKPFITH---HNDLDMNLFLRVAPELYHKMLVVGGIDRVYEVGRLFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y A+  YE +++   +++               +           
Sbjct: 329 GIDLTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVMSIKGTYKIEYHPNGPNTEPVYE 388

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +     + + + +  A      L        +  R +     +   +  +   T + + 
Sbjct: 389 VDFTPPFKRVHMYDGLAEKLGATLPDPSTLHTEEAREVFDKLCRDNNVDCSAPRTTARLL 448

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++ E +E        T L  +P   S LA  + + P  T+RFEL+A   E+ NA  EL
Sbjct: 449 DKLVGEYLEST--FISPTFLIGHPQIMSPLAKWHRSIPGLTERFELFAVTREIANAYTEL 506

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI QR RFE++ ++K    +E   IDE F   L   +P + G  MG DRL M++T  N
Sbjct: 507 NDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEYGLPPTGGWGMGIDRLSMILTDNN 566

Query: 338 NINEVIWTPFSQSN 351
           NI EV+  P  +  
Sbjct: 567 NIKEVLLFPAMRPE 580


>gi|237807750|ref|YP_002892190.1| lysyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511537|sp|C4LCP0|SYK_TOLAT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|237500011|gb|ACQ92604.1| lysyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 513

 Score =  325 bits (832), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 88/370 (23%), Positives = 154/370 (41%), Gaps = 31/370 (8%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D   R              R     RN + + +R +     F+E+++ 
Sbjct: 152 LRPLPEKHKGLTDQEARCRQRYLDLIANEESRRTFQIRNQVMNGIRNFLNSKNFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 212 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVYEVNRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFTMLE+Y A+  Y  LM     ++R  A+  +              +  + 
Sbjct: 268 GISVRHNPEFTMLEFYMAYADYNDLMDLTEEMLRTLAQNIHGTTKIRYAKDGEEGIEIDF 327

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                 +T+ E+  +Y N      +   +          A++  + +        + + I
Sbjct: 328 GQPFARMTMVESILKYGN-----DVKAEELTTLEGAIAVAKRHHVELMKSWELGHVITAI 382

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E  E    ++  T +  YPA  S LA     +P  T RFE +    E+ N   EL D 
Sbjct: 383 FEETAE--HMLHQPTFITEYPAAVSPLARRNDDNPEVTDRFEFFIGGREIANGFSELNDA 440

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +Q  RF+ ++ +K+   +E    D DF+  L   +P ++G  +G DRLVML T ++ I 
Sbjct: 441 EDQAERFQAQVAQKEAGDDEAMFYDADFVTALEHGLPPTAGQGIGIDRLVMLFTNSHTIR 500

Query: 341 EVIWTPFSQS 350
           +VI  P  + 
Sbjct: 501 DVILFPALRP 510


>gi|307566317|ref|ZP_07628756.1| lysine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307344894|gb|EFN90292.1| lysine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 577

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 93/376 (24%), Positives = 157/376 (41%), Gaps = 35/376 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR  +  ++R++F    
Sbjct: 141 LKPLPIVKYKDGEAYDKFDDPEQRYRQRYVDLVVNDNVKDTFLKRATVLRTMRQFFDNAG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 201 YTEVETPTLQTIAGGAS-ARPFITHF---NALNTDMYMRIATELYLKRLIVGGFEGVYEI 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNC 159
              +RN      H PEFT +E Y  ++ Y  +M     ++       N K      N   
Sbjct: 257 GKNFRNEGMDRFHNPEFTCMELYVQYKDYNWMMTFTEQLLEKICIAVNGKPEVQIGNKTI 316

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIF 218
           N  +  + + + +A       D         + +  + ++   + G+  +        + 
Sbjct: 317 NFKAPFKRLPILDAIKEKTGFD------LYGKNEDEIRHIAVSKLGLEDIDESFGKGKLI 370

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  E  E        T +  YP   S L   + + P  T+RFEL     EL NA  EL
Sbjct: 371 DEIFGEFCEGTY--TQPTFITDYPIEMSPLTKTHRSKPGLTERFELMVNGKELANAYSEL 428

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q  RF ++M+   K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG  
Sbjct: 429 NDPIDQEERFIEQMKLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKE 488

Query: 338 NINEVIWTPFSQSNQE 353
            I EV+  P  +   +
Sbjct: 489 YIQEVLLFPQMKPEAK 504


>gi|195565967|ref|XP_002106565.1| GD16054 [Drosophila simulans]
 gi|194203945|gb|EDX17521.1| GD16054 [Drosophila simulans]
          Length = 610

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R                R  I S +R++     F+EI++ 
Sbjct: 229 LHMLPHLHFGLKDKETRYRQRYLDLILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETP 288

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+++ +PE   K L+  G ++++     +RN 
Sbjct: 289 MMNMIAGGAT-AKPFVTH---HNDLKMDLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNE 344

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  +M     ++    +          +           
Sbjct: 345 GIDLTHNPEFTTCEFYMAYADYADIMDITEQLVSGMVKAIRGSYKIIYHPEGPEGPEQEL 404

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +       +                L     +  +      T + +  
Sbjct: 405 DFTPPFKRVSMIKTLEEKLQVKFPAADTFNSPETNQFLSQLCAKHQVECPAPRTTARLLD 464

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 465 KLVGEFIEEFCV--NPTFICEHPQIMSPLAKYHSSIPGLTERFELFVAKKEICNAYTELN 522

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 523 DPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRLAMFLTDSNN 582

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 583 IKEVLLFPAMKPE 595


>gi|281490916|ref|YP_003352896.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281374674|gb|ADA64194.1| Lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 494

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 159/365 (43%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 142 LRPLPEKFHGLTDTETRYRKRYLDLISNKESFDRFVTRSKIISEIRHYMDGRGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   + L+ + E   K+L+  G EK++     +RN 
Sbjct: 202 ILHSEAGGAA-ARPFFTH---HNTLDIDMALRIALELHLKRLIVGGMEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M     I +  A+ V  Q +  +     N   + +
Sbjct: 258 GMDTTHNPEFTMLESYEAYADFHDVMDLTEGIFQHVAKTVVGQDVLEYDGKEINVGGKFK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A    A +D    +   +          A++  I V    T    I +    + 
Sbjct: 318 RVHMVDAIKEVAGVDFWPEMTFEEAT------ALAKEHDIHVEKHFTSVGHIINEFFEKY 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA +   DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 372 VEET--LIQPTFVFGHPKEISPLAKMNEKDPRFTDRFELFINGKEYANAFSELNDPIDQL 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   +D D++  L   MP + G+ +G DRLVML TG  +I +V+ 
Sbjct: 430 ERFEAQAKAKELGDDEATGVDYDYVEALEHGMPPTGGLGIGIDRLVMLFTGTTSIRDVLL 489

Query: 345 TPFSQ 349
            P  +
Sbjct: 490 FPTMK 494


>gi|325981413|ref|YP_004293815.1| lysyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325530932|gb|ADZ25653.1| lysyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 501

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 162/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ +  ++RE+FVE  ++E+++ 
Sbjct: 146 LRPLPEKFHGLADQEQKYRQRYLDLITNEETRRVFTIRSRVIQAIREFFVERNYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  + FST     + +   L+L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 206 MMHPIPGGAS-AKPFSTH---HNALDMALFLRIAPELYLKRLVVGGMEKVFEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A++ +  LM     ++   A+        ++Q    +      
Sbjct: 262 GISTRHNPEFTMLEFYEAYQDHTYLMDFTEQMLAYTAQKVLGTTHLTYQGKTMDLSRPFM 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  ++               DR+ L    +   I    +D    +   +  E  
Sbjct: 322 RLTIIQAIQKF-----HPHYTAAQLNDRNYLIQALEALKIHYNPNDGLGGLQLSLFDETT 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P  T RFELY    E+ N   EL DP +Q  
Sbjct: 377 E--HLLFEPTFIVDYPAEVSPLARRNDNNPDITDRFELYIAGREIANGFSELNDPEDQAA 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ + K    +E    D D++  L   +P ++G  +G DRLVML+T + +I +VI  
Sbjct: 435 RFLEQAKAKDAGDSEAMHYDADYIRALEYGLPPTAGEGIGIDRLVMLLTDSPSIRDVILF 494

Query: 346 PFSQSN 351
           P  +  
Sbjct: 495 PQLRRE 500


>gi|94270667|ref|ZP_01291795.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
 gi|93450711|gb|EAT01789.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
          Length = 495

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 163/368 (44%), Gaps = 29/368 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I   +R++     F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDIETRYRQRYVDLMVNPEVRDTFRRRVEIIRLVRDFLTNRGFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G  T  + F T     + +   LYL+ +PE   K+LL  G E++F     +RN 
Sbjct: 199 MMQAIAGGAT-AKPFKTH---HNALGLDLYLRIAPELYLKRLLVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+ +Y++LM+    ++   A  V      S+Q    +      
Sbjct: 255 GLSTRHNPEFTMLEFYQAYATYDELMELAEEMLSWVAMEVCGTMQISYQGQEVDLAPPWR 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ EA      +D           D   L   A + G+ +        + + +    +
Sbjct: 315 RYTMDEALVAVGGLD------AALLDDFAALKELALKKGVELQPQAGIGKVKTELFELLV 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFEL+    E+ NA  EL DP +QR 
Sbjct: 369 EDK--LIDPTFITAYPTEVSPLARRNQENPEITDRFELFITGREMANAFSELNDPDDQRQ 426

Query: 287 RFEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           R EK++ E+     E +P +DEDFL  L   MP ++G  +G DRL ML+T A +I +VI 
Sbjct: 427 RLEKQIAER-GSDEEIFPVLDEDFLRALEYGMPPAAGCGVGIDRLTMLLTDAPSIRDVIL 485

Query: 345 TPFSQSNQ 352
            P  +  +
Sbjct: 486 FPHLRPEK 493


>gi|145589653|ref|YP_001156250.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189082962|sp|A4SYX2|SYK_POLSQ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145048059|gb|ABP34686.1| lysyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 514

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 96/372 (25%), Positives = 164/372 (44%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R+   +SLR + ++  F+E+++ 
Sbjct: 150 LRPLPDKFHGLSDLETKYRQRYVDLIVNPESRNTFKARSNAIASLRRHMLDADFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  T  + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MLHPIPGGAT-AKPFITH---HNALDMQMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM     +IR AA +     + + Q    +     +
Sbjct: 266 GVSPRHNPEFTMMEFYAAYTDYRWLMDFTEGLIRAAAVDAQGTAVLTHQGRELDLSKPFQ 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA----HDDTWSDIFSRIL 222
            +T+ EA  +Y     G + +     D   +  + ++ G         +     +   + 
Sbjct: 326 RLTINEAILKYCAQS-GKSYEAIQLDDADFIRAELKKGGENPDSPTLKNAGIGALQLALF 384

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
               E +  +   T +  YP   S LA      P  T+RFEL+    E+ N   EL D  
Sbjct: 385 ELVAESH--LWEPTYIIDYPIEVSPLARESDTRPGITERFELFITGREIANGFSELNDAE 442

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           +Q +RF K++++K+    E    D DF+  L   MP + G  +G DRLVML+T A NI +
Sbjct: 443 DQANRFRKQVEQKEAGDEEAMYFDHDFIRALEYGMPPTGGCGIGIDRLVMLLTDAPNIRD 502

Query: 342 VIWTPFSQSNQE 353
           VI  P  +  +E
Sbjct: 503 VILFPHLRREEE 514


>gi|313902254|ref|ZP_07835660.1| lysyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467484|gb|EFR62992.1| lysyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 552

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +    +  D  YR+R                R+ I   +R +  +  F E+++ 
Sbjct: 198 LYPLPEKWHGLQNVDLRYRQRYVDLIVNPQVLETFRLRSRIIREIRAFLDQRGFYEVETP 257

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 258 VLHLIYGGAA-ARPFVTH---HNALDLDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 313

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF-SEPE 166
                H PEFTMLE Y+A   YE +M+    ++   A+  +             F     
Sbjct: 314 GISTRHNPEFTMLELYQAFSDYEGMMELTEQLVSHVAQAVHGSPVVHYQGQAIDFTPPWR 373

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++ AEA    A +         D          A++  + +  D T + +   ++   +
Sbjct: 374 RLSFAEALESMAGV------RLEDVLTDEGARRVARERALELTRDPTPAAVLDELVDVYV 427

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P   +   T L  YP   S LA   P  P  T RFE     +E+ NA  EL DP +QR 
Sbjct: 428 QPR--LVQPTFLYDYPVVLSPLARRIPDRPHLTYRFEAMVAGMEIANAFSELNDPDDQRQ 485

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE+++  + +   E + +DED++  L   +P + G+ +G DRLVML+T   +I +VI  
Sbjct: 486 RFEEQLAARARGDEEAHQMDEDYIHALEIGLPATGGLGIGIDRLVMLLTDNPSIRDVILF 545

Query: 346 PFSQSN 351
           P  +  
Sbjct: 546 PLMRPR 551


>gi|254459446|ref|ZP_05072865.1| lysyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207083856|gb|EDZ61149.1| lysyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 505

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 85/368 (23%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S  R +F +  F+E+++ 
Sbjct: 142 ISPLPEKFHGVTDKEIRYRKRYLDLIMNADVRKTFKTRSKVISLTRRFFEDKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN 
Sbjct: 202 MMHPIAGGA-NAKPFVTH---HNALGIDRFLRIAPELYLKRLIVGGFEAVFEINRNFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+++Y+ L++          +  N             F+    
Sbjct: 258 GMDATHNPEFTSIEFYWAYKTYKDLIRITKEYFEYLFDHLNLPTLLPYGDMEVNFNNFTE 317

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I + E+      +            D+  +    +   I V        +   +  E +E
Sbjct: 318 IALIESLTTIGGV------PEEVVNDKEKIVEFLKSKDITVKPGQNLGQLQGELFDEFVE 371

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA     +P  T+RFEL+    E+ NA  EL DP++Q  R
Sbjct: 372 EK--LIDPTFITEYPVEISPLARRSDLNPAITERFELFIAGREIANAFSELNDPVDQYER 429

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+ ++  K    +E + +DEDF+  L   M  ++G  +G DRLVML+T  ++I +V+  P
Sbjct: 430 FKGQVDAKDAGDDEAHEMDEDFIDALSYGMAPTAGQGIGIDRLVMLLTNEHSIRDVLLFP 489

Query: 347 FSQSNQEE 354
             +    E
Sbjct: 490 AMKPIHNE 497


>gi|332652695|ref|ZP_08418440.1| lysine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332517841|gb|EGJ47444.1| lysine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 643

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 94/363 (25%), Positives = 167/363 (46%), Gaps = 29/363 (7%)

Query: 6   SQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +       +  YR+R              + R+     +R++     F+E+++  L   
Sbjct: 149 EKFHGLTNTELRYRQRYVDLIVNPEVKRNFIIRSQFIKYVRDFMDARGFMEVETPVLNTI 208

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
            G  T  R F T     + +   +Y++ + E   K+L+  G ++++     +RN      
Sbjct: 209 SGGAT-ARPFITH---HNTLDIDMYMRIATELPLKRLIVGGMDRVYEIGRIFRNEGMDPK 264

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYITVA 171
           H PEFT +E Y+A+  +  +M    +++  AA+ +       +Q    +       + + 
Sbjct: 265 HNPEFTTIELYQAYADFNDMMDLFEDLLSSAAQKILGTYQVEWQGEKIDLTPGWPRMPMH 324

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPN 229
           EA  +Y  ID      + +          A+  G+ +    D TW +       +K+E  
Sbjct: 325 EAVKKYCGIDFMAITSDEE------AVAAAKSIGVELPETADKTWGNALYECFDQKVEEK 378

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  +P   S LA   P+DPR T+RFEL+ C+ E+ NA  EL DPI+QR RF+
Sbjct: 379 --LIQPTFITMHPVDVSPLAKRSPSDPRLTERFELFICHSEMGNAFSELNDPIDQRQRFQ 436

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           K+++ + K  +E   +DEDFL  L   +P + G+ +G DR VML+T +++I EVI  P  
Sbjct: 437 KQVELRDKGDDEAGMMDEDFLTALEYGLPPTGGLGIGIDRCVMLLTNSDSIREVILFPTM 496

Query: 349 QSN 351
           +  
Sbjct: 497 KPE 499


>gi|262065895|ref|ZP_06025507.1| lysine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380375|gb|EFE87893.1| lysine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 493

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 157/366 (42%), Gaps = 28/366 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R              +KR  I  ++R+Y  +  F+E+++  
Sbjct: 139 RSLPEKYHGLTDVEIRYRKRYVDLIMNPDVRSTFIKRTQIIKAVRKYLDDRGFLEVETPL 198

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     + F T     + +   L+L+ +PE   KKL+  G E+++     +RN  
Sbjct: 199 MHPILGGAA-AKPFVTH---HNALNLDLFLRIAPELYLKKLIVGGFERVYELGRNFRNEG 254

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y++H ++  +M  C  II    +  N       +         + +
Sbjct: 255 ISTRHNPEFTMIELYQSHANFNDMMDLCEGIISSVCQEVNGTTDIEYDGVQLSLKNFQRV 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIE 227
            + +       +D    +              A++  + VA        I +    +K E
Sbjct: 315 HMVDMIKDVTGVDFWQEMT------FEEAKKLAKEHHVEVADHMDSVGHIINEFFEQKCE 368

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P FT RFEL+    E  NA  EL DP +QR R
Sbjct: 369 ER--VVQPTFVYGHPVEISPLAKRNEKNPNFTDRFELFINKREYANAFTELNDPADQRGR 426

Query: 288 FEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE +++E  +   E  P IDE F+  L   +P + G+ +G DRLVML+TGA +I +VI  
Sbjct: 427 FEAQVEEAMRGNEEATPEIDESFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PQMKPR 492


>gi|281420624|ref|ZP_06251623.1| lysine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281405397|gb|EFB36077.1| lysine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 576

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 92/375 (24%), Positives = 153/375 (40%), Gaps = 35/375 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              L+R  +  +LR       
Sbjct: 142 LKPLPIVKYKDGVAYDKFDDPELRYRQRYVDLIVNDGVKDTFLQRATVLRTLRSVLDNAG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F T     + + + +Y++ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPTLQSIAGGAS-ARPFITHF---NALDQDMYMRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     ++       N K     + N  
Sbjct: 258 GKNFRNEGMDRNHNPEFTCMELYVQYKDYNWMMAFTEKLLETICIAVNGKPEREIDGNII 317

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            F      + + +A       D               +    ++ G+ V        +  
Sbjct: 318 SFKAPYRRLPILDAIKEKTGFDCNG-------KTEEEIRAFCKEKGMDVDETMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            +  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 371 ELFGEFCEGT--FLQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF  +M+   K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 429 DPIDQEERFIDQMKLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKTF 488

Query: 339 INEVIWTPFSQSNQE 353
           I EV++ P  +  ++
Sbjct: 489 IQEVLFFPQMKPEKK 503


>gi|198282779|ref|YP_002219100.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665818|ref|YP_002424976.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198247300|gb|ACH82893.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518031|gb|ACK78617.1| lysyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 496

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 155/367 (42%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  +R+R                R    ++LR+   +  F E ++ 
Sbjct: 140 LRPLPEKWHGLADPETRFRQRYVDLIVTEATRRTFQIRAETVAALRDGLRQRGFYEAETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F T       +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 200 MMQPVPGGAT-ARPFVTH---HHALDMTLYLRIAPELYLKRLVVGGIEQVFEINRNFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLEWY A+  + + M     +IR AA+        S+Q +  +      
Sbjct: 256 GISTRHNPEFTMLEWYEAYADHVRAMDLTETLIRAAAQAALGTTAISYQGLEIDLGKPFH 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV E+   +        L + D  D  +L  +  Q  +       W      I  + +
Sbjct: 316 RLTVTESVRAH-----NPDLADADLRDPAVLAAKLAQLHLPCQPAWGWGKRLIEIFEKTV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YP   S LA     DP  T RFEL     EL N   EL DP +Q  
Sbjct: 371 EGH--LQQPTFITEYPLEVSPLARRNDLDPEVTDRFELMIAGRELANGFSELNDPEDQSA 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++ K     E    D D++  L   MP ++G+ +G DRLVML+    +I EVI  
Sbjct: 429 RFRAQVEAKDAGDEEAMFFDADYIRALEYGMPPTAGVGLGIDRLVMLLADQPSIREVILF 488

Query: 346 PFSQSNQ 352
           P  +  Q
Sbjct: 489 PHLRPEQ 495


>gi|254304063|ref|ZP_04971421.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148324255|gb|EDK89505.1| lysine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 493

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 156/366 (42%), Gaps = 28/366 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R              +KR  I  ++R+Y  +  F+E+++  
Sbjct: 139 RSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRDTFIKRTQIIKAVRKYLDDRGFLEVETPL 198

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     + F T     + +   LYL+ +PE   KKL+  G E+++     +RN  
Sbjct: 199 MHPILGGAA-AKPFVTH---HNALNLDLYLRIAPELYLKKLIVGGFERVYELGRNFRNEG 254

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y++H ++  +M  C  II    +  N       +           +
Sbjct: 255 ISTRHNPEFTMIELYQSHANFNDMMDLCEGIISSVCQEVNGTTDIEYDGVKLSLKNFARV 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIE 227
            + +       +D    +              A++  + VA        I +    +K E
Sbjct: 315 HMVDMIKEVTGVDFWKEMT------FEEAKKIAKEHHVEVADHMDSVGHIINEFFEQKCE 368

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P FT RFEL+    E  NA  EL DP +QR R
Sbjct: 369 ER--VVQPTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKREYANAFTELNDPADQRGR 426

Query: 288 FEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE +++E  +   E  P IDE F+  L   +P + G+ +G DRLVML+TGA +I +VI  
Sbjct: 427 FEAQVEEAMRGNEEATPEIDESFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PQMKPR 492


>gi|110637161|ref|YP_677368.1| lysyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110279842|gb|ABG58028.1| lysine--tRNA ligase [Cytophaga hutchinsonii ATCC 33406]
          Length = 575

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 94/378 (24%), Positives = 161/378 (42%), Gaps = 40/378 (10%)

Query: 1   MHQIP--------------SQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREY 35
           +  +P                 + + +  YR R              +KR  + +++REY
Sbjct: 140 LRPLPMPKEAVDENGEKKIFDAFTDPEQRYRMRYVDLIVNPHVRDAFIKRTRLVNTMREY 199

Query: 36  FVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEE 95
                ++E+++  LQ   G     R F T     + +  PLYL+ + E   K+L+  G +
Sbjct: 200 LNNKGYLEVETPILQPLYGGAA-ARPFKTH---HNTLDMPLYLRIANELYLKRLIVGGFD 255

Query: 96  KIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSF 154
            ++ F+  +RN      H PEFT +E Y A++ Y  +M     ++   A           
Sbjct: 256 GVYEFSKDFRNEGMSRFHNPEFTQVELYVAYKDYYWMMDLVEEMVEKVAVALHGTTEVQV 315

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
                +     +  T+ EA   Y  I++G         D   L    +   + V      
Sbjct: 316 GPHTISFQRPWKRFTMFEAIEHYTGINIGEM-------DEAQLRATCKSLNVDVDDSMGK 368

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
             +   I   K EP   +   T +  YP   S LA  +   P   +RFE      E+CN+
Sbjct: 369 GKLIDEIFGAKCEP--LLIQPTFITDYPVEMSPLAKKHRDKPGLVERFEAICNGKEICNS 426

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLV 333
             EL DPI+QR RFE++++  K+  +E+  +DEDFL  L   MP ++G+ +G DRL M++
Sbjct: 427 FSELNDPIDQRQRFEEQLELGKRGDSESMVLDEDFLRALEYGMPPTAGLGIGIDRLAMVM 486

Query: 334 TGANNINEVIWTPFSQSN 351
           T + +I +V++ P  +  
Sbjct: 487 TNSASIQDVLFFPQMRPE 504


>gi|325829779|ref|ZP_08163237.1| lysine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325487946|gb|EGC90383.1| lysine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 647

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 155/366 (42%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               KR  + S++R Y  ++ + E+++ 
Sbjct: 146 LRPLPEKFHGLADKETRYRQRYVDLVMNREVRDTFEKRFKVVSAIRRYMEDHGYYEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + + K  YL+ + E   K+LL  G EK+F     +RN 
Sbjct: 206 ILHPILGGA-NARPFVTH---HNALDKDFYLRIATELHLKRLLVGGFEKVFEIGRQFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E+Y+A    E +M+    +I+ AA          +Q    +      
Sbjct: 262 GMDPYHNPEFTTMEFYQAFSDLEGMMELTQGVIQAAALASCGTLQVEYQGHQVDLSGSWR 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ E  +  A  D+           R  L    ++ G           + + I     
Sbjct: 322 RATMIELASEGAGEDVSFQRT------RDELVDILERNGGHAEAAWGKGKLIAEIFEAVA 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DP  T+RFEL+ C  E  NA  EL DP++Q  
Sbjct: 376 EEK--LIQPTFVTEHPIEVSPLAKKLAGDPNLTERFELFICGHEYANAFGELNDPVDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++ K    +E    D+D++  L   MP + G  +G DRLVML+T A +I +V+  
Sbjct: 434 RFRAQVEAKDLGDDEAMGYDDDYVRALEYGMPPAGGCGIGIDRLVMLLTDAPSIRDVLLF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRDE 499


>gi|51245481|ref|YP_065365.1| lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50876518|emb|CAG36358.1| probable lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 503

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 169/371 (45%), Gaps = 31/371 (8%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR  I   +R++  +  F+E+++ 
Sbjct: 139 LRPLPDKWHGLSDVETRYRQRYVDLIVTPESREVFRKRGEIIRHIRDFLSDRGFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   LYL+ +PE   K+LL  G E++F     +RN 
Sbjct: 199 MMQAVPGGAT-AKPFKTH---HNALDMDLYLRVAPELYLKRLLVGGLERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+ +YE +M     ++  A E  N  +   +Q  + N     +
Sbjct: 255 GLSTRHNPEFTMLEFYQAYATYEDMMDITEEMVSTACEKVNGSMQIQYQGTDVNLAPPWQ 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E+  + A I            D       A++ GIR+          + +    +
Sbjct: 315 RMTMQESLTKVAGI------APEIMADAEATIALAKEKGIRLEETAGHGKAMTELFELLV 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFEL+    EL NA  EL DP++Q  
Sbjct: 369 EEK--LIDPTFITSYPTEVSPLARRNDEDPSTTDRFELFITGRELANAFSELNDPVDQYQ 426

Query: 287 RFEKEMQEKKKIYNETY--PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           RF K++ E+    +E     +D D++  L   MP ++G  +G DRL ML+T + +I +VI
Sbjct: 427 RFAKQIAER--GDDEEIHPELDHDYIRALEYGMPSAAGEGIGIDRLTMLLTDSPSIRDVI 484

Query: 344 WTPFSQSNQEE 354
           + P  ++  ++
Sbjct: 485 FFPHLKAETKK 495


>gi|82703393|ref|YP_412959.1| lysyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82411458|gb|ABB75567.1| lysyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 507

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 163/366 (44%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I  ++RE+ V + ++E+++ 
Sbjct: 152 LRPLPEKFHGLSDQEQKYRQRYLDLITNESSRKVFIARSRIIQAIREFLVGHGYLEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   LYL+ +PE   K+L+  G EK+F    ++RN 
Sbjct: 212 MMHPIPGGAA-ARPFITH---HNALDMQLYLRIAPELYLKRLVIGGLEKVFEINRSFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM     ++R    +V     F++Q    +      
Sbjct: 268 GISTRHNPEFTMLEFYEAYRDYAYLMDLTEALLREVTLKVLGAASFTYQERELDLAQPFA 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  ++               DR  L  + Q+ GI     D    +   +  E  
Sbjct: 328 RLTITEAIRKF-----HPEYTEAQLDDRAFLIDKLQELGIPYKPGDGVGGLQLTLFDETT 382

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YPA  S LA     +P  T RFELY    E+ N   EL DP +Q  
Sbjct: 383 E--HLLFDPTFIVDYPAEVSPLARRNDRNPAITDRFELYIAGREIANGFSELNDPEDQAV 440

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ + K+    E    D D++  L   +P ++G  +G DRLVML+T + +I +VI  
Sbjct: 441 RFLEQARAKEAGDAEAMHYDADYIRALEYGLPPTAGEGIGIDRLVMLLTNSPSIRDVILF 500

Query: 346 PFSQSN 351
           P  +  
Sbjct: 501 PQLRRE 506


>gi|315638751|ref|ZP_07893924.1| lysine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481160|gb|EFU71791.1| lysine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 502

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 89/368 (24%), Positives = 157/368 (42%), Gaps = 27/368 (7%)

Query: 3   QIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R                R+ I S +R +F    F+E+++  +
Sbjct: 142 PLPEKFHGLTDIEQRYRKRYVDMIMNADVRKDFFTRSKIVSLIRHFFENKGFLEVETPMM 201

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN   
Sbjct: 202 HPIAGGA-NAKPFVT---FHNALGVERFLRIAPELHLKRLIVGGFEAVFEINRCFRNEGM 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y  + +Y  LM     +     +  N +   +F +   +     E I
Sbjct: 258 DLTHNPEFTTIEFYWTYHNYRDLMDLTEELFALLLKELNLETKITFDDKIIDFSKPFERI 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +  EA  +Y N+D           ++  +  + +  G           + + +    +E 
Sbjct: 318 SYKEALKKYGNLD------KELIENKEQILNKLKNDGFEANEKLDLGHLQAELFDHYVED 371

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L+     D    +RFEL+    E+ N  +EL DP++Q  RF
Sbjct: 372 K--LINPTFIIDFPISISPLSRRSEKDENIAERFELFIAGKEIANGFNELNDPLDQYERF 429

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+++ K     E   +DEDF+  L   MP ++G  +G DRLVML+TG  +I +VI  P 
Sbjct: 430 LKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGEGIGIDRLVMLLTGKKSIRDVILFPA 489

Query: 348 SQSNQEEI 355
            +  + E+
Sbjct: 490 MRPLKSEL 497


>gi|295397836|ref|ZP_06807900.1| lysine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973933|gb|EFG49696.1| lysine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 506

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 166/365 (45%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR R               KR+ I   +R Y   N ++E+++ 
Sbjct: 153 LRPLPDKYHGLTDVEQIYRHRYLDLIANRESFDRFTKRSQIIREVRHYLDSNDYLEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 213 VLHNIAGGAS-ARPFITH---HNALDMELYLRIALELHLKRLVVGGMERVYEIGRVFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+     +M     + +  A +V      ++         +  
Sbjct: 269 GIDTTHNPEFTMLEVYTAYSKMTDVMDLVEGLFQSVAEKVLGTTSITYDGQAIELGGKWR 328

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A    + +D    + + +          A++  ++V ++ T   + +    E +
Sbjct: 329 RVHMVDAVKEVSGVDFWQEMTDEE------ARAIAKEHHVQVENNFTVGHVINEFFEEFV 382

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFE++    E  NA  EL DPI+QR 
Sbjct: 383 EDT--LIQPTFVYGHPTAISPLARKNEDDPRFTDRFEVFIVGSESGNAFTELTDPIDQRE 440

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++EK +  +E +P+DE+FL  L   MP + G+ +G DR+VML+T A +I +V+  
Sbjct: 441 RFEAQVKEKAEGNDEAHPLDEEFLEALETGMPPTGGLGIGIDRMVMLLTDAQSIRDVLLF 500

Query: 346 PFSQS 350
           P  ++
Sbjct: 501 PTMRN 505


>gi|257463162|ref|ZP_05627562.1| lysyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060754|ref|ZP_07925239.1| lysyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686430|gb|EFS23265.1| lysyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 493

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 159/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              LKR MI   L++Y  +  F+E+++ 
Sbjct: 137 IRALPEKFHGLTDVETRYRKRYVDLIMNRDVKETFLKRTMIIKELKKYLDDRGFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ +PE   KKL+  G +K++     +RN 
Sbjct: 197 MMHPIVGGAA-ARPFVTH---HNTLDIDLYMRIAPELYLKKLIVGGFDKVYDLNKCFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A+  +  +M     +I    +  N       +       + + 
Sbjct: 253 GMSTRHNPEFTTVELYQAYADFNDMMDLTEGVITSLCQKVNGTYDISFDGVDLHLKDFKR 312

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKI 226
           + + +       +D                   A++  + +A        + +    +K 
Sbjct: 313 VHMVDLIKEVTGVDFWRK-----DISFEEAKALAKEHHVEIAEHMNSVGHVVNEFFEQKC 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DP +QR 
Sbjct: 368 EEK--VIQPTFVYGHPVEISPLAKKNEEDPRFTDRFELFINAREYANAFSELNDPADQRS 425

Query: 287 RFEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           RFE +++E ++  +E  P ID+D++  L   +P + G+ +G DRLVML+TGA +I +VI 
Sbjct: 426 RFEAQVEEAERGNDEATPVIDDDYVEALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVIL 485

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 486 FPQMKPR 492


>gi|227512327|ref|ZP_03942376.1| lysyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227084502|gb|EEI19814.1| lysyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 501

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 168/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               KR+ I +++R Y   + ++E+++ 
Sbjct: 142 LRPLPDKWHGLQDKEQKYRQRYLDLISNQDSFDRFHKRSHIITAIRNYLDSHDYLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 202 VLHNQAGGA-NARPFITH---HNALNIDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M +   I + AA+      + ++Q    +     +
Sbjct: 258 GMDTRHNPEFTMLESYVAYYDFHDVMDETEGIFKAAAKTVTDDGMITYQGHTIDLDKPFK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +A   Y  ID    +D+ D            +  I          I +    E +
Sbjct: 318 RQHMVDAIKEYTGIDFWKPMDDDDAKKLAD------EHHIHYEPWWKTGHIINAFFEELV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P   +   T +  +P   S LA     DPRFT RFELY    E  NA  EL DPI+QR 
Sbjct: 372 QPK--LEQPTFIYGHPVEISPLAKKNAEDPRFTDRFELYILTNEFANAFTELNDPIDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E   IDED++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 430 RFEAQVKERQEGNDEAEGIDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 489

Query: 346 PFSQSN 351
           P  +  
Sbjct: 490 PTMRPE 495


>gi|68472101|ref|XP_719846.1| hypothetical protein CaO19.6749 [Candida albicans SC5314]
 gi|68472336|ref|XP_719729.1| hypothetical protein CaO19.14041 [Candida albicans SC5314]
 gi|46441560|gb|EAL00856.1| hypothetical protein CaO19.14041 [Candida albicans SC5314]
 gi|46441686|gb|EAL00981.1| hypothetical protein CaO19.6749 [Candida albicans SC5314]
 gi|238881122|gb|EEQ44760.1| lysyl-tRNA synthetase [Candida albicans WO-1]
          Length = 594

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 79/373 (21%), Positives = 153/373 (41%), Gaps = 29/373 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P++ +  +D    YR+R                R+ I   +R++     F+E+++ 
Sbjct: 215 LHMLPTEHYGFKDQEARYRKRYLDLIMNDSSRERFRVRSKIIQYIRKFLDNRDFVEVETP 274

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  + F+T     + +   ++++ +PE   K+L+  G ++++     +RN 
Sbjct: 275 ILNVIAGGAT-AKPFTTH---HNDLNMEMFMRIAPELFLKELVVGGMDRVYEIGRQFRNE 330

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y+A+     LM     +     +          +        +  
Sbjct: 331 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGDYVIKYHPEGPSGKEMTL 390

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + + + E   +  N+                L    +   +  +   T + +  
Sbjct: 391 DFSRPWKRVNMIEELEKVYNVKFPAGDQLHTAETGEFLKKVLKDNNLECSPPLTNARMLD 450

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL 
Sbjct: 451 KLVG---ELEDASINPTFIFGHPQMMSPLAKKDRNIPGLCERFEVFVATKEICNAYTELN 507

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE++ ++K +  +E   +DE F   L   +P ++G   G DRL M +T +N 
Sbjct: 508 DPFDQRARFEEQARQKAQGDDEAQMVDETFCNALEYGLPPTAGWGCGIDRLAMFLTDSNT 567

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 568 IREVLLFPTLKPD 580


>gi|195481726|ref|XP_002101754.1| GE15441 [Drosophila yakuba]
 gi|194189278|gb|EDX02862.1| GE15441 [Drosophila yakuba]
          Length = 580

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R                R  I S +R++     F+EI++ 
Sbjct: 194 LHMLPHLHFGLKDKETRYRQRYLDLILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETP 253

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+++ +PE   K L+  G ++++     +RN 
Sbjct: 254 MMNMIAGGAT-AKPFVTH---HNDLKMDLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNE 309

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  +M     ++    +          +           
Sbjct: 310 GIDLTHNPEFTTCEFYMAYADYADIMDITEQLVSGMVKAIRGSYKITYHPEGPEGPEQEL 369

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +       +                L     +  +      T + +  
Sbjct: 370 DFTPPFKRVSMIKTLEEKLQVKFPAADTFNSPETNQFLSQLCAKHQVECPAPRTTARLLD 429

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 430 KLVGEFIEEFCV--NPTFICEHPQIMSPLAKYHRSIPGLTERFELFVAKKEICNAYTELN 487

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +NN
Sbjct: 488 DPVVQRERFEQQASDKAAGDDEAQLVDENFCTSLEYGLPPTGGFGMGIDRLAMFLTDSNN 547

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 548 IKEVLLFPAMKPE 560


>gi|83748478|ref|ZP_00945500.1| Lysyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83724889|gb|EAP72045.1| Lysyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 510

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 154/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +SLR +  +  F+E+++ 
Sbjct: 151 LRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRRHMGDAGFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E+++     +RN 
Sbjct: 211 MLHPIPGGAA-AKPFITH---HNALDMQMFLRIAPELYLKRLIVGGFERVYEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    N+IR AA +     + ++Q    +      
Sbjct: 267 GVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAVLNYQGRELDLSKPFH 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+A+A  +YA         +    D   L  + +   I        +     + +   
Sbjct: 327 RLTIAQAIQKYA-----PQYTDAQLADADFLRTELKTFKIDTNAPQFLNAGVGTLQLVLF 381

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 382 EETAESQLWEPTFIIDYPVEVSPLARASDTRASITERFELFITGREIANGFSELNDPEDQ 441

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI
Sbjct: 442 AERFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVI 501

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 502 LFPHLRRE 509


>gi|269792728|ref|YP_003317632.1| lysyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100363|gb|ACZ19350.1| lysyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 505

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 157/365 (43%), Gaps = 25/365 (6%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR  I  ++R     +  +E+ + 
Sbjct: 151 LRPLPEKWHGLKDQEVRYRQRYLDLMVNPEVRETFRKRTRIIQTVRRVMESHGTLEVTTP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +  P+YL+ + E   K+L+    ++++     +RN 
Sbjct: 211 ILSTLAGGA-NARPFVT---FHNALGIPMYLRIATELYLKRLVVGMFDRVYEIGPNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y A+ + E +M  C  I+   A+    + F++Q            
Sbjct: 267 GIDLKHNPEFTAMEVYWAYANNEDMMNLCEEILVACADAVGSRTFTYQGREICFEPPFRR 326

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            T+ +    +  ID     D     +        ++    +   +T   +        +E
Sbjct: 327 ATMMDLVREHTGIDFEIISD-----EEARRIALERKVVEELKGYETRYHLLPEFFDAYVE 381

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA   P +P  T RFEL+    EL NA  EL DP++QR R
Sbjct: 382 DK--LIQPTFVIGHPTVISPLAKRNPDNPDITDRFELFVNGSELANAFSELNDPLDQRER 439

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F +++++K+   +E +  DEDF+  L   +P + G+ +G DRLVML+T + +I +VI  P
Sbjct: 440 FLEQVRQKEAGDDEAHVFDEDFINALEYGLPPTGGMGIGIDRLVMLLTDSKSIRDVILFP 499

Query: 347 FSQSN 351
             +  
Sbjct: 500 TMKPK 504


>gi|320527101|ref|ZP_08028290.1| lysyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132686|gb|EFW25227.1| lysyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 544

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 104/365 (28%), Positives = 162/365 (44%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPFL-----------LKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YRRR              + R  I S++R Y     ++E+++ 
Sbjct: 188 LRPLPDKFHGLQDKEERYRRRYVDLIMNDESRKIAILRPRIVSAIRRYMDSQGYLEVETP 247

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + R F T     + + K  YL+ + E   K+L+  G EK++     +RN 
Sbjct: 248 ILQPILGGA-NARPFITH---HNALDKDFYLRIATELPLKRLIVGGLEKVYEIGRIFRNE 303

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+   E +MK    +    A EV     F F   + +  +  +
Sbjct: 304 GMDLKHNPEFTTMEAYCAYTDLEGMMKLNEGLFEHVALEVCGTTDFKFMGQDISLKAPFK 363

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
              + +A      +D    +   +       Y  AQ+  I V         I S    E 
Sbjct: 364 RWNMVDAVKEVTGVDFWQPMSVEE------AYKLAQEHHITVEPHQMTVGHIISLFFEEF 417

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    I   T +  +P   S LA   P DPRFT RFEL    IE+ NA  EL DPI+QR
Sbjct: 418 CEDK--IVQPTFVYGHPIEISPLAKKNPEDPRFTDRFELLVNGIEMDNAFTELNDPIDQR 475

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +++ K+   +E   +D D++  L   +P + GI  G DR VML+TG ++I +V+ 
Sbjct: 476 ERFEAQLKAKELGDDEANEMDTDYVEALEYGLPPTGGIGFGIDRFVMLLTGTDSIRDVLL 535

Query: 345 TPFSQ 349
            P  +
Sbjct: 536 FPTMK 540


>gi|85057408|ref|YP_456324.1| lysyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123725349|sp|Q2NJZ8|SYK_AYWBP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|84789513|gb|ABC65245.1| lysyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 496

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 154/367 (41%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWWNR---DFHYRR----------RPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +   D   +R          R   L R++I   +R +F    F+E+++ 
Sbjct: 140 LKPLPDKFHGLQNREDMRKKRYVDLIVNEKTRQVFLTRSLIMKYIRNFFDNQGFLEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G  +  + F T     + +    YL+ + E   KKL+  G  K++     +RN 
Sbjct: 200 ILQPTLGGAS-AKPFITH---HNALNCDFYLRIATELPLKKLIVGGMNKVYEIGRLFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEF+ +E Y A+   + +M      ++   +    K+          FS    
Sbjct: 256 GIDATHNPEFSTIEAYLAYADMQDIMDLTKQCLQELVQKIFGKLQFTYQNQEIDFSHFAK 315

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +++  +      ID        D          A++  I V    +   I      + +E
Sbjct: 316 VSMVASIKEKTGID------FTDHFTLEQCLSLAKKHKIEVMPHFSQGHIIEAFFGKYVE 369

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPIEQ  R
Sbjct: 370 --NALIQPTFVYGHPLEISPLAKQNEFDPRFTDRFELFIVGKEFANAFRELNDPIEQEKR 427

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++++K+    E   +D DFL  L   MP + G+ MG DRLVML+T   NI +VI  P
Sbjct: 428 FLNQLKQKQLGNEEANDMDYDFLNALNYGMPPTGGLGMGIDRLVMLLTDTANIRDVILFP 487

Query: 347 FSQSNQE 353
             ++  +
Sbjct: 488 HCKNQNK 494


>gi|327291844|ref|XP_003230630.1| PREDICTED: lysyl-tRNA synthetase-like [Anolis carolinensis]
          Length = 600

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 85/376 (22%), Positives = 158/376 (42%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R  I + +R +  E  F+E+++ 
Sbjct: 217 LHMLPHLHFGLKDKETRFRQRYLDLILNDFVRQKFIVRAKIITYVRTFLDELGFLEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 277 MMNVIPGGAV-AKPFITH---HNELDMNLYMRVAPELYHKMLVVGGMDRVYEIGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 333 GIDLTHNPEFTTCEFYMAYADYHDLMEITEQLLSGMVKRITGGYKVTYHPDGAEGQAYEI 392

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ +   R   + L        +  R    +  ++ G+      + + +  
Sbjct: 393 DFTPPFRKISMVDELQRVLGVTLPAVDQFETEETRKFFDMLCEERGVECPLPRSTARLLD 452

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + A    T+RFEL+    E+CNA  EL 
Sbjct: 453 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRARQGLTERFELFVMRKEICNAYTELN 510

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP  Q   FE + + K    +E   IDE+F   L   +P ++G  MG DRL M +T +NN
Sbjct: 511 DPFRQHQLFEDQAKAKADGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLAMFLTDSNN 570

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +  +++
Sbjct: 571 IKEVLLFPAMKPEEKK 586


>gi|167764830|ref|ZP_02436951.1| hypothetical protein BACSTE_03221 [Bacteroides stercoris ATCC
           43183]
 gi|167697499|gb|EDS14078.1| hypothetical protein BACSTE_03221 [Bacteroides stercoris ATCC
           43183]
          Length = 574

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 90/355 (25%), Positives = 148/355 (41%), Gaps = 26/355 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +  YR+R              LKR  I  ++R    E  + E+++  LQ  PG  +  
Sbjct: 161 DPELRYRQRYVDLIVNDGVKETFLKRATIIKTMRAVLDEAGYTEVETPILQSIPGGAS-A 219

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H PEFT 
Sbjct: 220 RPFITH---HNSLDMDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNPEFTC 276

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           +E Y  ++ Y  +M     ++             +      +  +    + + +A     
Sbjct: 277 MELYVQYKDYNWMMGFTEKLLERICIAVNGSTETTIDGKTISFKAPYRRLPILDAIKEKT 336

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             DL              +    ++  + +        +   I  E  E        T +
Sbjct: 337 GYDLNG-------KSEEEIRQVCRELKMEIDDTMGKGKLIDEIFGEFCEGT--FIQPTFI 387

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF+++++  +K 
Sbjct: 388 TDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFKEQLKLSEKG 447

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +E   ID+DFL  L   MP +SGI +G DRL ML+TG   I EV++ P  +  +
Sbjct: 448 DDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGQAFIQEVLFFPQMRPEK 502


>gi|257453433|ref|ZP_05618728.1| lysyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257449185|gb|EEV24133.1| lysyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 510

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 164/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR R              + R+ + + +REY +  +++E+++ 
Sbjct: 153 LRPLPDKFHGLSDTEARYRSRHLDLMTNEDSRNAFIIRSKVIAGIREYMLNERYMEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 213 MMHVIPGGAV-ARPFVTH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  YE LMK   N+    A  +       +Q    +  +  E
Sbjct: 269 GVSARHNPEFTMIEFYQAYADYEDLMKLTENMFEKLANDILGTTEIDYQGEAISFKAPFE 328

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ-AGIRVAHDDTWSDIFSRILIEK 225
            + + +A  +YA+       D     DR  L   A+      V        + + I  E 
Sbjct: 329 RLPMTKAIEKYAD-----NFDMSKIADRDYLADYAKNVLKQDVKDIFGIGKLQTIIFEET 383

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +   T RFEL+    E+ N   EL DPI+Q 
Sbjct: 384 AETK--LRQPTFVTEYPAETSPLARRNDDNSEITDRFELFIGGREIANGFSELNDPIDQA 441

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF++++ EK    +E    D +F+  L   +P ++G  +G DRLVML T A +I +VI 
Sbjct: 442 ERFKQQVAEKDAGDDEAMHYDAEFIEALSYGLPPTAGEGIGIDRLVMLFTNAPSIRDVIL 501

Query: 345 TPFSQ 349
            P  +
Sbjct: 502 FPHMR 506


>gi|294674370|ref|YP_003574986.1| lysine--tRNA ligase [Prevotella ruminicola 23]
 gi|294474187|gb|ADE83576.1| lysine--tRNA ligase [Prevotella ruminicola 23]
          Length = 575

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 92/375 (24%), Positives = 147/375 (39%), Gaps = 35/375 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR  I  ++R       
Sbjct: 141 LKPLPIVKYKDGVAYDKFDDPELRYRQRYVDLVVNEGVKDTFLKRATIIRTMRSILDNAG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+D+  LQ   G  +  R F T     + + + +Y++ + E   K+L+  G E ++  
Sbjct: 201 YTEVDTPILQSIAGGAS-ARPFITHF---NALNQDMYMRIATELYLKRLIVGGFEGVYEM 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y +++     M     ++       N K     +    
Sbjct: 257 GKNFRNEGMDKTHNPEFTCMELYVSYKDLLWGMTFTEKMLEEICTAVNGKPEVEIDGKVI 316

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            F      + + +A       D        D      +       G+ V        +  
Sbjct: 317 SFKAPFRRLPILDAIKEKTGFDC-------DGKTEDEIRAFCLSKGMDVDETMGKGKLID 369

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            +  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 370 ELFGEFCEST--FIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 427

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF ++M+   K  +E   ID DFL  L   MP + GI +G DRLVML+TG   
Sbjct: 428 DPIDQEERFIEQMKLADKGDDEAMIIDHDFLRALQYGMPPTFGIGIGIDRLVMLMTGKFA 487

Query: 339 INEVIWTPFSQSNQE 353
           I EV+  P  +  ++
Sbjct: 488 IGEVMLFPQMKPEKK 502


>gi|268530758|ref|XP_002630505.1| C. briggsae CBR-KRS-1 protein [Caenorhabditis briggsae]
          Length = 571

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 90/374 (24%), Positives = 158/374 (42%), Gaps = 29/374 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R+ I + LR Y     F+E+++ 
Sbjct: 189 LHMLPHSHFGLKDKELRFRKRYLDLILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETP 248

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K L+  G ++++     +RN 
Sbjct: 249 IMNQIAGGAT-AKPFITH---HNDLDMNLFLRVAPELYHKMLVVGGIDRVYEVGRLFRNE 304

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y A+  YE +++   +++               +           
Sbjct: 305 GIDLTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVLAIKGTYKIEYHPNGPNTEPVYE 364

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +     + + + E  A   N  L        +  R       +   +  +   T + + 
Sbjct: 365 VDFTPPFKRVNMYEGLAEKLNTKLPDPSTLDTEEARQTFDKLCRDNNVDCSEPRTTARLL 424

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++ E +E        T L  +P   S LA  + + P  T+RFEL+A   E+ NA  EL
Sbjct: 425 DKLVGEYLEST--FISPTFLIGHPQIMSPLAKWHRSIPGLTERFELFAVTREIANAYTEL 482

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI QR RFE++ ++K    +E   IDE F   L   +P + G  MG DRL M++T  N
Sbjct: 483 NDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEYGLPPTGGWGMGIDRLSMILTDNN 542

Query: 338 NINEVIWTPFSQSN 351
           NI EV+  P  +  
Sbjct: 543 NIKEVLLFPAMRPE 556


>gi|17535927|ref|NP_495453.1| lysyl (K) tRNA Synthetase family member (krs-1) [Caenorhabditis
           elegans]
 gi|2501024|sp|Q22099|SYK_CAEEL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1086773|gb|AAA82396.1| Lysyl (k) trna synthetase protein 1, isoform a [Caenorhabditis
           elegans]
          Length = 572

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 88/374 (23%), Positives = 158/374 (42%), Gaps = 29/374 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R+ I + LR Y     F+E+++ 
Sbjct: 189 LHMLPHSHFGLKDKELRFRKRYLDLILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETP 248

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K L+  G ++++     +RN 
Sbjct: 249 IMNQIAGGAT-AKPFITH---HNDLDMNLFLRVAPELYHKMLVVGGIDRVYEVGRLFRNE 304

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y A+  YE +++   +++               +           
Sbjct: 305 GIDLTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVMSIKGTYKIEYHPNGPNTEPVYE 364

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +     + + + +  A      L        +  R +     +   +  +   T + + 
Sbjct: 365 VDFTPPFKRVHMYDGLAEKLGATLPDPSTLHTEEAREVFDKLCRDNNVDCSAPRTTARLL 424

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++ E +E        T L  +P   S LA  + + P  T+RFEL+A   E+ NA  EL
Sbjct: 425 DKLVGEYLEST--FISPTFLIGHPQIMSPLAKWHRSIPGLTERFELFAVTREIANAYTEL 482

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI QR RFE++ ++K    +E   IDE F   L   +P + G  MG DRL M++T  N
Sbjct: 483 NDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEYGLPPTGGWGMGIDRLSMILTDNN 542

Query: 338 NINEVIWTPFSQSN 351
           NI EV+  P  +  
Sbjct: 543 NIKEVLLFPAMRPE 556


>gi|303238055|ref|ZP_07324596.1| lysine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302481751|gb|EFL44805.1| lysine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 576

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 158/375 (42%), Gaps = 33/375 (8%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R               KR  +  ++R +F E  
Sbjct: 141 LKPLPIVKYKDGVAYDKFDDPELRYRQRYVDLVVNEGVKETFQKRATVLRTMRNFFDEAG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 201 YTEVETPTLQTIAGGAS-ARPFITHF---NALNTEMYMRIATELYLKRLIVGGFEGVYEI 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     +I       N K          
Sbjct: 257 GKNFRNEGMDRFHNPEFTCMELYVQYKDYNWMMSFTERLIEKICTAVNGKPEIQVGDKLI 316

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            F      + + +A       DL    D  ++  R++   + +  GI  +       +  
Sbjct: 317 SFKAPFRRLPILDAIKEKTGFDLN---DKTEEEIRNIAVNELKLEGIDASFGK--GKLID 371

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E +      T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 372 EIFGEFCEGSY--IQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 429

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++M+      +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 430 DPIDQEERFKEQMRLADNGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQEY 489

Query: 339 INEVIWTPFSQSNQE 353
           I EV+  P  +   +
Sbjct: 490 IQEVLLFPQMKPEAK 504


>gi|257791982|ref|YP_003182588.1| lysyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|317489991|ref|ZP_07948483.1| lysyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|257475879|gb|ACV56199.1| lysyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|316910989|gb|EFV32606.1| lysyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 647

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 155/366 (42%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               KR  + S++R Y  ++ + E+++ 
Sbjct: 146 LRPLPEKFHGLADKETRYRQRYVDLVMNREVRDTFEKRFKVVSAIRRYMEDHGYYEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + + K  YL+ + E   K+LL  G EK+F     +RN 
Sbjct: 206 ILHPILGGA-NARPFVTH---HNALDKDFYLRIATELHLKRLLVGGFEKVFEIGRQFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E+Y+A    E +M+    +I+ AA          +Q    +      
Sbjct: 262 GMDPYHNPEFTTMEFYQAFSDLEGMMELTQGVIQAAALASCGTLQVEYQGHQVDLSGSWR 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ E  +  A  D+           R  L    ++ G           + + I     
Sbjct: 322 RATMIELASEGAGEDVSFQRT------RDELVDILERNGGHAEAAWGKGKLIAEIFEAVA 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DP  T+RFEL+ C  E  NA  EL DP++Q  
Sbjct: 376 EEK--LIQPTFVTEHPIEVSPLAKKLAGDPNLTERFELFICGHEYANAFGELNDPVDQAE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++ K    +E    D+D++  L   MP + G  +G DRLVML+T A +I +V+  
Sbjct: 434 RFRAQVEAKDLGDDEAMGYDDDYVRALEYGMPPAGGCGIGIDRLVMLLTDAPSIRDVLLF 493

Query: 346 PFSQSN 351
           P  +  
Sbjct: 494 PHMRDE 499


>gi|160900680|ref|YP_001566262.1| lysyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160366264|gb|ABX37877.1| lysyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 519

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 160/369 (43%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R+R              + R+   S +RE+ VE+ F+E+++ 
Sbjct: 162 LRPMPDKFHGMADLEQKVRQRYVDLMMDEQARRRFIARSKAVSGIREFMVEHGFLEVETP 221

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 222 MLHPIPGGA-NAKPFVTH---HNALDQEMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 277

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y  LM     ++R AA+        ++     +     +
Sbjct: 278 GISVRHNPEFTMMEFYAAYWNYRDLMDYTEALVRDAAQKAVGTLQLTYGGKPVDLSQPFQ 337

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  ++               DR  L    ++ G+    D   +   + + +   
Sbjct: 338 RLTIPEAIVKFTE-------AGDKVADREWLTNALRKLGMTEEKDRLSTRTLASLQVLYF 390

Query: 227 EP--NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E      +   T +  +P   S LA      P  T+RFELY    E  N   EL D  +Q
Sbjct: 391 EEVVEEKLWQPTFIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELNDAEDQ 450

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  ++Q K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 451 AARFNAQVQAKDGGDDEAMYFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSASIRDVI 510

Query: 344 WTPFSQSNQ 352
             P  +  Q
Sbjct: 511 LFPALRREQ 519


>gi|304436292|ref|ZP_07396270.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370697|gb|EFM24344.1| lysine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 501

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 151/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR  I  S+R Y     F+E+++ 
Sbjct: 147 LRPLPEKFHGLKDVDTRYRQRYLDLMVNQEVRETFRKRTAILQSIRRYLDARDFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E S K+L+  G ++++     +RN 
Sbjct: 207 VLSTLAGGAA-ARPFVTH---HNALDIDLYLRIATELSLKRLIVGGLDRVYEMGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A   +  LM     I+R AAE                  +   
Sbjct: 263 GMDVRHNPEFTSIEIYQAFADHRDLMAITEGIVRQAAEDVLGTTKITYQGVEIDLEQVRT 322

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I++ +A       D  +                A++  +          I +    EK+E
Sbjct: 323 ISMNDAVREATGKDFLSCRTV------DEARAMAREIHVPFEERHGIGGILNAAFEEKVE 376

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +  +   T +  +P   S LA     DPR T RFE +    EL N   EL DPI+Q  R
Sbjct: 377 ES--LMQPTFITGHPTEISPLAKRNADDPRITDRFEFFIYGRELANGFTELNDPIDQEQR 434

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++ +++    E + +D D++  L   +P + G+ +G DRLVML+T + +I +V+  P
Sbjct: 435 FLDQLAQREAGDAEAHVMDHDYVTALEYGLPPTGGLGIGIDRLVMLLTDSPSIRDVLLFP 494

Query: 347 FSQS 350
             + 
Sbjct: 495 TMKP 498


>gi|300704643|ref|YP_003746246.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum
           CFBP2957]
 gi|299072307|emb|CBJ43640.1| lysine tRNA synthetase, constitutive [Ralstonia solanacearum
           CFBP2957]
          Length = 510

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 153/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +SLR +  +  F+E+++ 
Sbjct: 151 LRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRRHMGDAGFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E+++     +RN 
Sbjct: 211 MLHPIPGGAA-AKPFITH---HNALDMQMFLRIAPELYLKRLIVGGFERVYEINRNFRNE 266

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    N+IR  A +     + ++Q    +      
Sbjct: 267 GVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRRAAIDATGSAVLNYQGRELDLSKPFH 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+A+A  +YA         +    D   L  + +   I        +     + +   
Sbjct: 327 RLTIAQAIQKYA-----PQYTDAQLADADFLRTELKTFKIDTNAPQFLNAGVGTLQLVLF 381

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 382 EETAESQLWEPTFIIDYPVEVSPLARASDTRASITERFELFITGREIANGFSELNDPEDQ 441

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI
Sbjct: 442 AERFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVI 501

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 502 LFPHLRRE 509


>gi|300172738|ref|YP_003771903.1| lysyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887116|emb|CBL91084.1| Lysyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 493

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 154/364 (42%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ I S++R Y     F+E+++ 
Sbjct: 142 LRPMPDKFHGIADVETRYRKRYLDLIANEESFKKFQLRSKIISAIRGYMDSQDFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +   +Y++ + E   K+L+  G E+++     +RN 
Sbjct: 202 ILQTEAGGAA-ARPFITH---HNALNIDMYMRIATELYLKRLVVGGFERVYEMGRIFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  +  +M +   I + AA V +     ++Q    +   +  
Sbjct: 258 GMDPKHNPEFTTMETYAAYMDFTDVMDETEGIFKAAAAVVSDDLKVTYQGTEIDLGVKFA 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +       ID    +              A    ++         I +    E +
Sbjct: 318 RKHMVDLIKEQTGIDFWQEMTV------EEAQKLADDKHVKYEKYWHVGHIINAFFEEFV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 372 EDT--LIQPVFVYGHPVDVSPLAKKNADDSRFTDRFELFIMGSEYGNAFTELNDPIDQRA 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ E++   +E   IDEDF+  L   MP + G+ +G DRLVML+T ++ I +V+  
Sbjct: 430 RFEAQVAERENGNDEAENIDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSDTIRDVLLF 489

Query: 346 PFSQ 349
           P  +
Sbjct: 490 PTMR 493


>gi|197294580|ref|YP_001799121.1| Lysyl-tRNA synthetase (class II) [Candidatus Phytoplasma
           australiense]
 gi|226736752|sp|B1VA97|SYK_PHYAS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|171853907|emb|CAM11870.1| Lysyl-tRNA synthetase (class II) [Candidatus Phytoplasma
           australiense]
          Length = 497

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 94/361 (26%), Positives = 157/361 (43%), Gaps = 26/361 (7%)

Query: 1   MHQIPSQPWWNRDF-------------HYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    ++              + + R   L R++I  S+R +F    F+E+++ 
Sbjct: 139 LKPLPDKFHGLQNREEMRKKRYLDLMVNEKSRQVFLTRSLIIKSIRNFFDNEGFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ S G  +  + F T     + +    YL+ + E   KKL+  G  K++     +RN 
Sbjct: 199 ILQPSLGGAS-AKPFIT---SHNALNSDFYLRIATELPLKKLIVGGMPKVYEIGRIFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEF+ +E Y+A+   + +M+     ++   +   + +          F   + 
Sbjct: 255 GMDATHNPEFSTIEAYQAYSDIQGMMELTQKCLQYICQTVLKSLEINYQNKKISFQTFQK 314

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I++ +A  +   ID    L              A+Q  I V    +   I      + +E
Sbjct: 315 ISMTDAIKKETGIDFQKKLSQ------ETCLQLAKQHDINVMSHFSQGHIIEVFFEKYVE 368

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +PRFT RFEL+    E  NA  EL DPIEQ  R
Sbjct: 369 HK--LIQPTFIYGHPLEISPLAKKNLNNPRFTDRFELFIAGKEFVNAFSELNDPIEQEKR 426

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++++K+   +E   +D DFL  L   MP + G+ MG DR+VML+T   NI +VI  P
Sbjct: 427 FLNQLKQKELGDDEACEMDYDFLDALSYGMPPTGGLGMGIDRIVMLLTDTPNIRDVILFP 486

Query: 347 F 347
            
Sbjct: 487 H 487


>gi|328950625|ref|YP_004367960.1| Lysyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450949|gb|AEB11850.1| Lysyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 499

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 91/367 (24%), Positives = 158/367 (43%), Gaps = 29/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               KR  I   +R +  +  F+E+++ 
Sbjct: 135 LRPLPDKWHGIRDKEVRYRQRYLDLIVNPEVREVFKKRAQIVRFVRRFLEDRGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  + G  T  R F T     + +     L+ + E   K+LL  G EK+F     +RN 
Sbjct: 195 VIVPTAGG-TEARPFRT---YHNALGTEFELRIALELPLKRLLVGGFEKVFEIGRVFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y  + +   +++   A+  +      +Q    +     +
Sbjct: 251 GIDAQHNPEFTMLELYWAYADYNDVAQLVEDLLSSLAKAIHGSYTVPYQGREIDFTPPFK 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I+  E     A +D        D  D   L   A+      A D     +  ++    +
Sbjct: 311 RISFVETLKERAGLDF-------DPLDLEQLQRWARAKHPEFA-DVPSYKLLDKLFEHYV 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA  +   P  T+R++L+   +EL  A  EL DP++QR 
Sbjct: 363 EAE--LWNPTFVYDFPLAISPLAKKHREKPGLTERWDLFVAGLELAPAYSELNDPLDQRA 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ + ++    E +  DEDFL  L   MP + G+ +G DRL M++T   +I +VI  
Sbjct: 421 RFEEQARRREAGDEEAHGYDEDFLVALEHAMPPAGGLGIGIDRLTMILTDMPSIRDVILF 480

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 481 PLLKPRR 487


>gi|227888862|ref|ZP_04006667.1| lysyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|268318842|ref|YP_003292498.1| lysyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
 gi|227850699|gb|EEJ60785.1| lysyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|262397217|emb|CAX66231.1| lysyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
          Length = 514

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 161/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++    +D    YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 142 LRPLPNKWDGLKDVEQIYRQRYLDLITNHDSYMRFVHRTQIIQAIRDYLNNRDFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+  G E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGGMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GLDTKHNPEFTELETYAAYWDFHDVMDEAEGIIRAAAKVVSPDGKITYQGTDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A +  +          I +    E  
Sbjct: 318 RVHMVDLIKEKTGVDFWKPMTI------EEARKVADEHNVHYESYWKVGHIINAFFEEFG 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++    E  NA  EL DP +QRH
Sbjct: 372 E--GSIVQPTFVYGHPVEVSPLAKKNADDPRFTDRFEIFIMGAEYGNAFSELNDPDDQRH 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E++   +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEDQMAEREAGNDEADMIDEDYLRAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPEKVE 498


>gi|154151870|ref|YP_001405488.1| lysyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|154000422|gb|ABS56845.1| lysyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 514

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 167/365 (45%), Gaps = 27/365 (7%)

Query: 3   QIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R                R+ I SS+R Y  E  F+E ++  L
Sbjct: 142 PLPEKFHGLTDVEKRYRQRYVDLIANEEVRQNFRNRSRILSSIRRYLSERDFLEFETPIL 201

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G   + R F+T     + + + L+L+ +PE   K+L+  G E+IF  A  +RN + 
Sbjct: 202 QPVYGGA-NARPFTT---FHNCLGQKLFLRIAPELYLKRLVVGGFERIFEIARNFRNEDI 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYI 168
              H PEFTM+E Y A+     +M    + +    + V N+   +F+  + +       +
Sbjct: 258 DTHHNPEFTMVEIYWAYHDVYDMMDLTEDFLATLVQEVHNKTEITFEGTSISFAKPLRRL 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           ++A+A   YA ID+     +  +       L+            T  +         +E 
Sbjct: 318 SMADAVKEYAGIDIFALSVDELRAFAIQNKLK------EAEKPQTQREFLVYFFENMVEE 371

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S LA  +     FT+RFEL+   +EL N   EL DP++Q+ RF
Sbjct: 372 K--LIQPTFIYDFPVENSPLAKRHRTKEGFTERFELFIYGMELANGFSELNDPLDQKERF 429

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E + ++++    E   ID DF+  L   MP + G+ +G DRLVML+TG N+I EVI  P 
Sbjct: 430 EAQDKKRQLGDLEAQMIDYDFINALGYGMPPTGGVGIGIDRLVMLLTGNNSIKEVILFPS 489

Query: 348 SQSNQ 352
            +S Q
Sbjct: 490 MKSVQ 494


>gi|153808814|ref|ZP_01961482.1| hypothetical protein BACCAC_03114 [Bacteroides caccae ATCC 43185]
 gi|149128640|gb|EDM19858.1| hypothetical protein BACCAC_03114 [Bacteroides caccae ATCC 43185]
          Length = 576

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 93/360 (25%), Positives = 148/360 (41%), Gaps = 27/360 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              LKR  +  +LR    E  + E+++  LQ   G 
Sbjct: 157 DSFEDPELRYRQRYVDLVVNDGVKETFLKRATVVKTLRNALDEAGYTEVETPILQSIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++       N            +  +    + + +A 
Sbjct: 273 EFTCMELYVQYKDYNWMMNFTEKLLERICIAVNGCTESVVDGKTISFKAPYRRLPILDAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGIN 233
                 DL              +    ++  +    D      +   I  E  E      
Sbjct: 333 KEKTGYDLNG-------KSEEEIRQVCKELKMEEIDDTMGKGKLIDEIFGEFCEGTY--I 383

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF+++M+
Sbjct: 384 QPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFKEQMR 443

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   I EV++ P  +  +
Sbjct: 444 LADKGDDEAMIIDQDFLRSLQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFPQMRPEK 503


>gi|282880920|ref|ZP_06289611.1| lysine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305143|gb|EFA97212.1| lysine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 578

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 90/375 (24%), Positives = 156/375 (41%), Gaps = 35/375 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              L+R  +  ++R+   +  
Sbjct: 142 LKPLPIVKYKDGVAYDKFEDPELRYRQRYVDLVVNDGVKNTFLQRATVLRTMRKVLDDAG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F+T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPTLQSIAGGAS-ARPFTTHF---NALNIDMYMRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M+    ++       N       +    
Sbjct: 258 GKNFRNEGMDRNHNPEFTCMELYVQYKDYNWMMEFTEKLLETVCIAVNGSPEKEIDGQLV 317

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            F      + + +A       DL    +N        +    ++  + +        +  
Sbjct: 318 SFKAPYRRLPILDAIKEKTGYDLNGKGENE-------IREICKKLNMEIDDSMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 371 EIFGEFCEGTY--IQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+++M+   K  +E   ID DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 429 DPIDQEERFQEQMKLADKGDDEAMIIDHDFLRALQYGMPPTSGIGIGIDRLVMLMTGKTF 488

Query: 339 INEVIWTPFSQSNQE 353
           I EV+  P  +  ++
Sbjct: 489 IQEVLLFPQMKPEKK 503


>gi|319792237|ref|YP_004153877.1| lysyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315594700|gb|ADU35766.1| lysyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 520

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 163/368 (44%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P   +   +++  YR+R                R+   S+LRE+ V N F+E+++ 
Sbjct: 163 LRPLPGDFYGMADQEQKYRQRYVDLITDEAARVRFTARSKAVSALREFMVANDFLEVETP 222

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + ++L+ +PE   K+L+  G E++F    ++RN 
Sbjct: 223 MLHPIPGGA-NAKPFKTH---HNALDQEMFLRIAPELYLKRLIVGGFERVFEINRSYRNE 278

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y  LM     +IR  A+     +  ++     +     E
Sbjct: 279 GISVRHNPEFTMMEFYAAYWNYRDLMDFTETLIRTIADKAVGSQQLTYGGKPVDLSQPFE 338

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  ++   D G  +D     D   L    ++ G+    D       + + +   
Sbjct: 339 RLTIREAILKHT--DAGDGVD-----DTAWLINGLRKLGLSEEKDKLSQRSLASLQVMYF 391

Query: 227 EPNLG--INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E  +   +   T +  +P   S LA      P  T+RFELY    E  N   EL D  +Q
Sbjct: 392 EETVEEKLWQPTFIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELNDAEDQ 451

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  ++  K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 452 AARFNAQVAAKDSGDDEAMYYDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVI 511

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 512 LFPALRRE 519


>gi|29347532|ref|NP_811035.1| lysyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253570876|ref|ZP_04848284.1| lysyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298383771|ref|ZP_06993332.1| lysine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|39932184|sp|Q8A5W4|SYK_BACTN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29339432|gb|AAO77229.1| lysyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251839825|gb|EES67908.1| lysyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298263375|gb|EFI06238.1| lysine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 576

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 27/360 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R               KR  +  +LR    E  + E+++  LQ   G 
Sbjct: 157 DSFEDPELRYRQRYVDLVVNEGIKETFEKRATVVRTLRNALDEAGYTEVETPILQSIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS-EPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++       N    +  +     F      + + +A 
Sbjct: 273 EFTCMELYVQYKDYNWMMSFTEKLLERICIAVNGSTETVVDGKTISFKAPYRRLPILDAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGIN 233
                 DL              +    ++  +    D      +   I  E  E +    
Sbjct: 333 KEKTGYDLNG-------KSEEEIRQICKELKMEEIDDTMGKGKLIDEIFGEFCEGSY--I 383

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DP++Q  RF+++M+
Sbjct: 384 QPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPLDQEERFKEQMR 443

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   I EV++ P  +  +
Sbjct: 444 LADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFPQMRPEK 503


>gi|294783903|ref|ZP_06749225.1| lysine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479715|gb|EFG27494.1| lysine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 493

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 157/366 (42%), Gaps = 28/366 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R              +KR  I  ++R+Y  +  F+E+++  
Sbjct: 139 RSLPEKYHGLTDVEIRYRKRYVDLIMNPDVRSTFIKRTQIIKAVRKYLDDRGFLEVETPL 198

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     + F T     + +   L+L+ +PE   KKL+  G E+++     +RN  
Sbjct: 199 MHPILGGAA-AKPFVTH---HNALNLDLFLRIAPELYLKKLIVGGFERVYELGRNFRNEG 254

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y++H ++  +M  C  II    +  N       +         + +
Sbjct: 255 ISTRHNPEFTMIELYQSHANFNDMMDLCEGIISSVCQEVNGTTDIEYDGVQLSLKNFQRV 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIE 227
            + +       +D    +              A++  + VA        + +    +K E
Sbjct: 315 HMVDMIKDVTGVDFWQEMT------FEEAKKLAKEHHVEVADHMDSVGHVINEFFEQKCE 368

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P FT RFEL+    E  NA  EL DP +QR R
Sbjct: 369 ER--VVQPTFVYGHPVEISPLAKRNEKNPNFTDRFELFINKREYANAFTELNDPADQRGR 426

Query: 288 FEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE +++E  +   E  P IDE F+  L   +P + G+ +G DRLVML+TGA +I +VI  
Sbjct: 427 FEAQVEEALRGNEEATPEIDESFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PQMKPR 492


>gi|303388940|ref|XP_003072703.1| lysyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303301845|gb|ADM11343.1| lysyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 440

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 98/375 (26%), Positives = 162/375 (43%), Gaps = 31/375 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  IP++ +   + +  YRRR               KR  I   +R +     F+E+++ 
Sbjct: 73  LRTIPTEHFGLKDPETIYRRRYMDLLINRESKERFEKRTQIIRYIRSFLDSRGFLEVETP 132

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ SPE   KKL+  G ++++     +RN 
Sbjct: 133 MMNLIPGGAA-AKPFITH---HNELNLNLYMRVSPELYLKKLVVGGLDRVYEIGKQFRNE 188

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF----------SFQNV 157
                H PEFT  E+Y A+  Y  LMK    ++    +                   + V
Sbjct: 189 GIDLTHNPEFTSCEFYMAYGDYNDLMKMTEELMSGIVQEMFGTDTIVYNPRKRGEEIKPV 248

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           + +       I++ E       +DL     + ++    LL    ++ GI V    T + +
Sbjct: 249 SLSFKRPFRVISIIEELNTRLGLDLSGETLDNEETLEKLLG-VCEKEGIHVEKPRTLTRV 307

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             +++   IEP       T +  YP   S LA  + + P  T+RFEL+    E+CNA  E
Sbjct: 308 LDKLIGHVIEPQCV--NPTFIKDYPIAMSPLAKNHRSKPGLTERFELFINCKEVCNAYTE 365

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L +P EQR RF ++ Q+     +E    DEDF   L   +P ++G  +G DR VM +T A
Sbjct: 366 LNNPFEQRERFLQQAQDINAGDDEAMMNDEDFCTALEYGLPPTAGWGLGIDRFVMYLTNA 425

Query: 337 NNINEVIWTPFSQSN 351
            NI +VI+ P  +  
Sbjct: 426 ANIRDVIFFPTMKPE 440


>gi|47575822|ref|NP_001001255.1| lysyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|45768826|gb|AAH67987.1| lysyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 578

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 157/376 (41%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R  + + LR++  +  F+EI++ 
Sbjct: 195 LHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFIVRAKLITYLRKFLDDLGFLEIETP 254

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 255 MMNVIPGGAV-AKPFIT---YHNELDMKLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 310

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 311 GIDLTHNPEFTTCEFYMAYADYYDLMEITEKLLSGMVKHITGGYKVIYHPEGPEGPEYEI 370

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++     +     L  T     +  R LL     +  +      T + +  
Sbjct: 371 DFTPPFRRISMVHELEKALGKKLPATDQFDTEETRKLLDDICVEKEVECPAPRTTARLLD 430

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ + +E        T +  +P   S LA  + ++   T+RFEL+    E+CNA  EL 
Sbjct: 431 KLVGDFLEVTC--INPTYICDHPQIMSPLAKWHRSEKGLTERFELFVMKKEICNAYTELN 488

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE + + K    +E   IDE F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 489 DPVRQRELFEDQAKAKAAGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 548

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +    +
Sbjct: 549 IKEVLLFPAMKPEDNK 564


>gi|269123799|ref|YP_003306376.1| lysyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315125|gb|ACZ01499.1| lysyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 496

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 162/368 (44%), Gaps = 29/368 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R             + KR  I    R Y  +  F+E+++ 
Sbjct: 137 IRPLPDKFSGLQNIEMRYRQRYIDLVMNPEVMDTMKKRFEIIRYFRTYLEKKGFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G   + R F T     + +   +YL+ +PE   K+LL  G EK+F     +RN 
Sbjct: 197 MLHPTLGGA-NARPFITH---HNALDMDMYLRIAPELYLKRLLVGGFEKVFEINRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  +  +M    ++I              +++   N      
Sbjct: 253 GVSIKHNPEFTMMELYQAYADFNDMMDITEDLISSLTYHLYGTYEIPYEDKTVNLAKPWR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD--IFSRILIE 224
            +T+ E    +    +       +          A+  GI +  D T++   I + +  E
Sbjct: 313 RVTMKEIVREHTGFVMD------ENTTDESAIEFAKGLGIHLDKDKTYTKFGILNLLFEE 366

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           K+E    I   T +  YP   S L+     +  +  RFEL+    E  NA  EL DP +Q
Sbjct: 367 KVEHT--IVNPTFVTDYPKEISPLSKNSKGESDWVDRFELFITGREYGNAYSELNDPKDQ 424

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           + RFE++++ K+   +E   +D D++  L   MP + G+ +G DRLVML+T +++I +VI
Sbjct: 425 KERFEEQVRAKENGDDEASEMDLDYIRALEYGMPPAGGLGIGIDRLVMLLTNSSSIRDVI 484

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 485 MFPTLKKE 492


>gi|42518374|ref|NP_964304.1| lysyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41582659|gb|AAS08270.1| lysyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 513

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 161/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++    +D    YR+R              + R  I  ++R+Y     F+E+++ 
Sbjct: 142 LRPLPNKWDGLKDVEQIYRQRYLDLITNHDSYMRFVHRTQIIQAIRDYLNNRDFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+  G E+++     +RN 
Sbjct: 202 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGGMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 258 GLDTKHNPEFTELETYAAYWDFHDVMDEAEGIIRAAAKVVSPDGKITYQGTDIDLGKPFR 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A +  +          I +    E  
Sbjct: 318 RVHMVDLIKEKTGVDFWKPMTI------EEARKVADEHNVHYESYWKVGHIINAFFEEFG 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++    E  NA  EL DP +QRH
Sbjct: 372 E--GSIVQPTFVYGHPVEVSPLAKKNADDPRFTDRFEIFIMGAEYGNAFSELNDPDDQRH 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E++   +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 430 RFEDQMAEREAGNDEADMIDEDYLRAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PTMRPEKVE 498


>gi|329957693|ref|ZP_08298168.1| lysine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328522570|gb|EGF49679.1| lysine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 574

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 90/355 (25%), Positives = 149/355 (41%), Gaps = 26/355 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +  YR+R              LKR  I  ++R    E  + E+++  LQ  PG  +  
Sbjct: 161 DPELRYRQRYVDLIVNDGVKETFLKRATIIKTMRAVLDEAGYTEVETPILQSIPGGAS-A 219

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F+T     + +   LYL+ + E   K+L+  G E ++     +RN      H PEFT 
Sbjct: 220 RPFTTH---HNSLDMDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNPEFTC 276

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           +E Y  ++ Y  +M     ++             +      +  +    + + +A     
Sbjct: 277 VELYVQYKDYNWMMGFTEKLLERICIAVNGGTETTIDGKTISFKAPYRRLPILDAIKEKT 336

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             DL              +    ++  + +        +   I  E  E        T +
Sbjct: 337 GYDLNG-------KSEEEIRQVCRELKMEIDDTMGKGKLIDEIFGEFCEGT--FIQPTFI 387

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF+++++  +K 
Sbjct: 388 TDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFKEQLKLSEKG 447

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +E   ID+DFL  L   MP +SGI +G DRL ML+TG   I EV++ P  +  +
Sbjct: 448 DDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGQAFIQEVLFFPQMRPEK 502


>gi|317120994|ref|YP_004100997.1| lysyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315590974|gb|ADU50270.1| lysyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 552

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 159/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +    RD    YR+R                R+ +   +R +     F E+++ 
Sbjct: 198 LYPLPEKWHGLRDVDLRYRQRYVDLVVNPQVLETFKIRSKVIREIRAFLDRRGFYEVETP 257

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 258 VLHLIYGGAA-ARPFITH---HNALDLDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 313

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPE 166
                H PEFTMLE Y+A   YE +M+    ++   A+  +      +Q    +      
Sbjct: 314 GISTRHNPEFTMLELYQAFSDYEGMMELTEQLVSHVAQAVHGTPVVRYQGQEIDFTPPWR 373

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++ A+A    A +         D          AQ+  + +  D T + +   ++   +
Sbjct: 374 RLSFAQALEEMAGV------RLDDVLTEDGARRVAQERALELTKDPTPAAVLDELVDVYV 427

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P   +   T L  YP   S LA   P  P  T RFE     +E+ NA  EL DP +QR 
Sbjct: 428 QPR--LVQPTFLYDYPVVLSPLARRIPDRPHLTYRFEALVAGMEIANAFSELNDPDDQRQ 485

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE+++  + +   E + +DED++  L   +P + G+ +G DRLVML+T + +I +VI  
Sbjct: 486 RFEEQLAARARGDEEAHQMDEDYIHALEIGLPATGGLGIGIDRLVMLMTDSPSIRDVILF 545

Query: 346 PFSQSN 351
           P  +  
Sbjct: 546 PLMRPR 551


>gi|299530673|ref|ZP_07044088.1| lysyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298721189|gb|EFI62131.1| lysyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 514

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 158/368 (42%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRD----FHYRR---------RPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D       R          R   + R+   + +R++ VE+ F+E+++ 
Sbjct: 157 LRPMPDKFHGMADLEQKVRQRYVDLMTDEEARKRFVARSKAVAGIRDFMVEHGFLEVETP 216

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 217 MLHPIPGGA-NAKPFITH---HNALDQEMYLRIAPELYLKRLIVGGFERVFEINRNFRNE 272

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y+ LM     +IR AA         S+     +     E
Sbjct: 273 GISVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAAMKAVGTLELSYGGKPVDLAKPFE 332

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y            +  +R  L    ++ G++   D   +   + + +   
Sbjct: 333 RLTIPEAIVKYTE-------AGDNVGNREWLTNALKKLGMKEDKDKLSTRTLASLQVLYF 385

Query: 227 EP--NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E      +   T +  +P   S LA      P  T+RFELY    E  N   EL D  +Q
Sbjct: 386 EEVVEDKLWNPTFIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELNDAEDQ 445

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  +++ K    +E    D DF+  L   MP + G  +G DR +ML+T + +I +VI
Sbjct: 446 AARFNAQVEAKDGGDDEAMYFDHDFVRALEYGMPPTGGCGIGIDRFMMLLTDSASIRDVI 505

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 506 LFPALRRE 513


>gi|194336791|ref|YP_002018585.1| lysyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693364|sp|B4SB22|SYK_PELPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|194309268|gb|ACF43968.1| lysyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 511

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 98/377 (25%), Positives = 165/377 (43%), Gaps = 39/377 (10%)

Query: 1   MHQIPSQP-------------WWNRDFHYRRR-----------PFLLKRNMIQSSLREYF 36
           +  IP                + +++  YR+R              +KR+ I S +R  F
Sbjct: 148 LRPIPVAKEKEVDGEKVVFDAFSDKELRYRQRYVDLIVNPEVKETFIKRSAIVSFMRNAF 207

Query: 37  VENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
               ++E+++  LQ   G     R F+T     + +   LYL+ + E   K+L+  G + 
Sbjct: 208 TGKGWLEVETPILQPIYGGAA-ARPFTTH---HNALDMQLYLRIANELYLKRLIVGGFDG 263

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQ- 155
           +F FA  +RN      H PEFT +E Y A++ Y  +M+    +    A   N+   +   
Sbjct: 264 VFEFAKDFRNEGIDRFHNPEFTQVELYVAYKDYNWMMEMVEELFSQTALAVNKSEVTTFL 323

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
               +       +++ +A   Y   ++              L   A+  G+ +    +  
Sbjct: 324 GNEISLKPPFRRLSIIDAITEYTGQNIAGQS-------EEQLRYTAKDLGLELDPKISSG 376

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            I   I  E +EP   +   T +  YP   S LA  +P+ P   +RFEL     E+CN+ 
Sbjct: 377 KIIDEIFGEFVEPK--LIQPTFIIDYPTEMSPLAKEHPSQPGIVERFELIIGGKEVCNSF 434

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP+ QR R E + + +++   E   +DEDFL  +   MP  +GI +G DRLVM++T
Sbjct: 435 SELNDPVIQRERLESQAKLRQRGDEEAMIVDEDFLRAIEYGMPPCAGIGIGIDRLVMILT 494

Query: 335 GANNINEVIWTPFSQSN 351
           G ++I EVI+ P  +  
Sbjct: 495 GQDSIREVIFFPHLKPE 511


>gi|71895483|ref|NP_001025754.1| lysyl-tRNA synthetase [Gallus gallus]
 gi|53130732|emb|CAG31695.1| hypothetical protein RCJMB04_9m1 [Gallus gallus]
          Length = 590

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 84/376 (22%), Positives = 154/376 (40%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R  I + +R +  E  F+EI++ 
Sbjct: 207 LHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIVTYIRSFLDELGFLEIETP 266

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 267 MMNIIPGGAM-AKPFIT---YHNELDMKLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNE 322

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 323 GIDLTHNPEFTTCEFYMAYADYRDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQAYEI 382

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ +   +   +   +T     +  R           +      T + +  
Sbjct: 383 DFTPPFRRISMVDELEKTLGVKFPSTESFETEETRRFFDDLCAVRNVECPPPRTTARLLD 442

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  +      T+RFEL+    E+CNA  EL 
Sbjct: 443 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRIHRGLTERFELFVMKKEVCNAYTELN 500

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR  FE + + K    +E   IDE+F   L   +P ++G  MG DR  M +T ++N
Sbjct: 501 DPFQQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRFTMFLTDSSN 560

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 561 IKEVLLFPAMKPEDKK 576


>gi|302385515|ref|YP_003821337.1| lysyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302196143|gb|ADL03714.1| lysyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 501

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 166/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ +  ++R++     F+E+++ 
Sbjct: 146 LQILPEKFHGLTNTDIRYRQRYVDLIMNPEVRDTFVKRSQVIKAIRDHLDAQGFMEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 206 MLVANAGGAA-ARPFETHY---NALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M    N+ R  A +V    + S+  V  +     E
Sbjct: 262 GVDTRHNPEFTLMELYQAYTDYHGMMDLVENLFRSVALKVLGTAVVSYDGVEIDLSKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y +ID      +            A Q  +         DI S +  E +
Sbjct: 322 RITMVDALKKYKDIDFTAVRTD------EEAKALADQYHVEYEARHKKGDILSLLFEEFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L    P DP +T+RFEL+    E+ NA  EL DP++Q  
Sbjct: 376 EEH--LVQPTFIMDHPVEISPLTKKKPDDPDYTERFELFITKREMANAYSELNDPLDQIE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +        +E   +D+DF+  L   MP + GI +G DR VML+T +  I +V+  
Sbjct: 434 RFKAQEALLAAGDDEANTMDDDFVNALMIGMPPTGGIGIGIDRFVMLLTDSYAIRDVLLF 493

Query: 346 PFSQSNQE 353
           P  ++ ++
Sbjct: 494 PTMKTIEK 501


>gi|320581604|gb|EFW95824.1| Lysyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 590

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 155/374 (41%), Gaps = 29/374 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P++ +  +D    YR+R              + R+ I S +R++     FIE+++ 
Sbjct: 211 LHMLPTEHYGFKDQEARYRKRYLDLIMNKSTKDTFVTRSKIISYIRKFLDSRNFIEVETP 270

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G E+++     +RN 
Sbjct: 271 MMNVIAGGAT-AKPFITH---HNDLDMDMYMRIAPELFLKELVVGGLERVYEIGRQFRNE 326

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y A+     LM     +     +          + +         
Sbjct: 327 GIDMTHNPEFTTCEFYEAYADVYDLMDTTELLFSEMVKEITGDYKIKYHPDGPDGKELTL 386

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I + E   +  ++          +     L     +  +      T + +  
Sbjct: 387 DFSRPWKRINMIEELEKLFDVKFPPGDQLHTKETGEFLKSILIKHKLDCPPPLTNARMLD 446

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++    E        T +  +P   S LA    + P   +RFE++    E+CNA  EL 
Sbjct: 447 KLVG---ELEDTCINPTFIFGHPQMMSPLAKYDRSKPGLCERFEVFVATKEICNAYTELN 503

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE++ ++K +  +E   IDE F   L   +P ++G   G DRL M +T +N 
Sbjct: 504 DPFDQRQRFEEQARQKAQGDDEAQLIDETFCNALEYGLPPTAGWGCGIDRLAMFLTDSNT 563

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  + +Q
Sbjct: 564 IREVLLFPTLKPDQ 577


>gi|253583599|ref|ZP_04860797.1| lysine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251834171|gb|EES62734.1| lysine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 493

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 157/367 (42%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR  I   +RE      F+E+++ 
Sbjct: 137 IRPLPEKFHGLTDVETRYRKRYVDLIMNKDVRDTFIKRTQIIKGIREILDNKGFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   LY++ +PE   K+L+  G EK++     +RN 
Sbjct: 197 LMHPILGGAA-AKPFITH---HNALNVDLYMRIAPELYLKRLIVGGLEKVYELGRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E Y+A+  +  +M     II   A+          N         + 
Sbjct: 253 GMSTRHNPEFTMIELYQAYADFNDMMDLAEEIITTLAKKVLGTTTVEYNGKTLVLENFKR 312

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKI 226
           I + +       +D                   A+Q  + VA        + ++   EK 
Sbjct: 313 IHMVDFVKEVTGVDFWDQNM-----TFEEAKALAKQHHVEVADHMNSVGHVVNQFFEEKC 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DP +QR 
Sbjct: 368 EEK--IVQPTFVYGHPVEISPLAKRNEEDPRFTDRFELFIDAREYANAFSELQDPADQRG 425

Query: 287 RFEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           RFE +++E ++  +E  P ID+DF+  L   +P + G+ +G DRL+ML+T +++I +V+ 
Sbjct: 426 RFEDQVEEAERGNDEATPVIDDDFVEALEYGLPPTGGMGIGIDRLIMLLTQSDSIRDVLL 485

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 486 FPQMKPR 492


>gi|224126015|ref|XP_002329640.1| predicted protein [Populus trichocarpa]
 gi|222870521|gb|EEF07652.1| predicted protein [Populus trichocarpa]
          Length = 603

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 84/365 (23%), Positives = 159/365 (43%), Gaps = 28/365 (7%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R+ I   ++ +  +  F+E+++  +   PG   
Sbjct: 238 LKDQETRYRQRYLDLMLNSEVRQIFKTRSKIIKYIQNFLDDLDFLEVETPMMNMIPGGAA 297

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LY++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 298 -ARPFKTH---HNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 353

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A+  Y  LM+    ++    +          +        +  +       I 
Sbjct: 354 TTCEFYMAYADYNDLMELTEKMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPFRRID 413

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E   + AN+++   L + +      L    ++  ++     T + +  +++   +E  
Sbjct: 414 MIEELEKMANLNIPKDLSSDEAT--KYLVAACEKFEVKCPPPQTTTRLLDKLVGHFLEET 471

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 + +  +P   S LA  + + P  T+RFEL+    ELCNA  EL DP+ QR RFE
Sbjct: 472 CV--NPSFIINHPEIMSPLAKWHRSKPGLTERFELFVNKHELCNAYTELNDPVVQRQRFE 529

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++++++   +E   +DE F   L   +P + G  +G DRL ML+T + NI EV+  P  
Sbjct: 530 AQLKDRQSGDDEAMALDETFCMALEYGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFPAM 589

Query: 349 QSNQE 353
           +   E
Sbjct: 590 KPQDE 594


>gi|291287175|ref|YP_003503991.1| lysyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884335|gb|ADD68035.1| lysyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 489

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 166/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR++I   +RE+F+   F+E+++ 
Sbjct: 133 LRDLPEKWHGLKDVETRYRQRYVDLIVNDEVKETFRKRSLIIQKVREFFIGRDFLEVETP 192

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +  PL+L+ +PE   K+L+  G E+IF     +RN 
Sbjct: 193 MMHPIVGGAT-AKPFETH---HNALDMPLFLRIAPELYLKRLVIGGFERIFELNRNFRNE 248

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+EWY A+  Y  LM     +I   A   N K   +++    N      
Sbjct: 249 GLSTRHNPEFTMVEWYNAYNDYHGLMDMIEEMICGIAVSLNGKEKLTYKEKEMNLKRPWA 308

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A     +I            DR      A++AGI V +      I   I  E  
Sbjct: 309 RMTMHDAICSMTDI------TPEMLKDRASAEAAAKKAGIHVDNSWGKGKIIMEIFEELC 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T+RFEL+    EL N  +EL DP++Q+ 
Sbjct: 363 EHE--LFNPTFIIDYPKEVSPLAKSKADDPETTERFELFMGGFELANGFNELNDPMDQKE 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFEK++  K+    E   +D D++  L   +P ++G  +G DRLV+L T + +I +V+  
Sbjct: 421 RFEKQVAAKEAGDEEAQMMDTDYIRALEYGLPPTAGAGLGIDRLVILFTDSQSIRDVLLF 480

Query: 346 PFSQSN 351
           P  +  
Sbjct: 481 PHMRPE 486


>gi|207725250|ref|YP_002255646.1| lysyl-trna synthetase (lysine--trna ligase) (lysrs) protein
           [Ralstonia solanacearum MolK2]
 gi|206590484|emb|CAQ37446.1| lysyl-trna synthetase (lysine--trna ligase) (lysrs) protein
           [Ralstonia solanacearum MolK2]
          Length = 490

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 154/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R    +SLR +  +  F+E+++ 
Sbjct: 131 LRPLPDKFHGLADQEMKYRQRYVDLIVSPETRNTFRARTKAIASLRRHMGDAGFMEVETP 190

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E+++     +RN 
Sbjct: 191 MLHPIPGGAA-AKPFITH---HNALDMQMFLRIAPELYLKRLIVGGFERVYEINRNFRNE 246

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    N+IR AA +     + ++Q    +      
Sbjct: 247 GVSPRHNPEFTMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAVLNYQGRELDLSKPFH 306

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+A+A  +YA         +    D   L  + +   I        +     + +   
Sbjct: 307 RLTIAQAIQKYA-----PQYTDAQLADADFLRTELKTFKIDTNAPQFLNAGVGTLQLVLF 361

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 362 EETAESQLWEPTFIIDYPVEVSPLARASDTRASITERFELFITGREIANGFSELNDPEDQ 421

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF K++++K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI
Sbjct: 422 AERFRKQVEQKDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVI 481

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 482 LFPHLRRE 489


>gi|320450006|ref|YP_004202102.1| lysyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150175|gb|ADW21553.1| lysyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 491

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 163/368 (44%), Gaps = 29/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +     +++  YR+R               +R  +   +R +F E  F+E+++ 
Sbjct: 132 LHPLPDKWHGIKDKEVRYRQRYLDLIVNPEVREVFRRRTAMVRYIRRFFEERGFLEVETP 191

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + +    YL+ S E   K+LL  G EK+F     +RN 
Sbjct: 192 ILQPTTGGA-EARPFKT---YHNALDHEFYLRISLELYLKRLLVGGFEKVFEIGRNFRNE 247

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ + K    ++      +       +Q    +      
Sbjct: 248 GIDHNHNPEFTMLEAYWAYADYQDMAKLVEELLSGLVLHLFGSYQVPYQGRVLDFTPPFR 307

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I+  EA    A +         D  D   L + A      +A   ++  +  ++    +
Sbjct: 308 RISFVEALKEKAGLPF-------DPLDLERLRIFADAHHPELAQVPSY-KLLDKLFGIYV 359

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  +P   S LA  +   P  T+R++LYA  +EL  A  EL DP++QR 
Sbjct: 360 EPE--LQNPTFVFDFPLAISPLAKRHREKPGLTERWDLYAGGMELAPAYSELNDPLDQRE 417

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ + +++   E    DEDFL  L   MP ++G+ +G DRL M++T   ++ +V+  
Sbjct: 418 RFLEQARRRREGDEEAPEPDEDFLLALEYGMPPAAGLGLGLDRLAMILTDQPSLRDVLLF 477

Query: 346 PFSQSNQE 353
           P  +  +E
Sbjct: 478 PLLKPKRE 485


>gi|260890988|ref|ZP_05902251.1| lysine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260859015|gb|EEX73515.1| lysine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 494

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 163/371 (43%), Gaps = 29/371 (7%)

Query: 2   HQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +       +  YR+R             + KR  I    R Y  +  F E+++  
Sbjct: 136 RPLPEKFHGLTNIETRYRQRYVDLVMNREVMDTMKKRFQIIRFFRSYLEKQGFTEVETPM 195

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G  T  R F T     + +   L+L+ +PE   K+LL  G EK+F    ++RN  
Sbjct: 196 MHPVAGGAT-ARPFVTH---HNALDMELFLRIAPELYLKRLLVGGFEKVFEINRSFRNEG 251

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPEY 167
               H PEFTM+E Y+A+  +  +M    ++I       + K    +++   N       
Sbjct: 252 ISIKHNPEFTMMELYQAYADFNDMMDLTEDLISSLTFELHGKYEIEYEDKTINMAKPWRR 311

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD--IFSRILIEK 225
           +T+          D  T   + D  ++      A++  I +  D T++   I + I  EK
Sbjct: 312 VTMKGIVKETTGFDFDTVSSDEDAINK------AKEMNIPLEKDRTYTKYGILNLIFEEK 365

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S L+     +  +  RFEL+    E  NA  EL DP +Q+
Sbjct: 366 VEGT--LLNPTFITEYPKEISPLSKNQKGETEWVDRFELFISGREFANAYSELNDPRDQK 423

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE++++ K+   +E   +D D++  L   MP + G+ +G DRLVML T + +I +VI 
Sbjct: 424 ERFEEQVKLKEAGDDEAQGMDLDYIRALEYGMPPAGGLGIGIDRLVMLQTNSASIRDVIL 483

Query: 345 TPFSQSNQEEI 355
            P  +    E+
Sbjct: 484 FPTLRKEDIEL 494


>gi|326573293|gb|EGE23261.1| lysyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326575808|gb|EGE25731.1| lysyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 507

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 160/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +  + +F+E+++ 
Sbjct: 152 LRPLPDKFHGLTDTEVKYRKRYLDLMVNEETRNTFAIRAKVVAGIRAFLTQERFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   LYL+ +PE   K+L+  G +++F     +RN 
Sbjct: 212 MMHVIPGGAS-ARPFVTH---HNALDMQLYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     ++   A  +      S+Q    +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMALTERMLETLAMDILGSTDVSYQGEVFSFKGPFK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ-QAGIRVAHDDTWSDIFSRILIEK 225
            IT+ +     A ++  +     D  DR  L    + +    V        + + +  E 
Sbjct: 328 KITMFD-----AILEHNSDFSADDINDREFLAKFVKDELKQEVKPSFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE++    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITEYPAETSPLARRNDTNPHVTDRFEMFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  ++ EK    +E    D DF+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 441 ERFRAQVAEKDAGDDEAMHYDADFIEALEYGLPPTAGEGIGIDRLVMLFADAASIRDVIL 500

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 501 FPHMRHK 507


>gi|167044234|gb|ABZ08915.1| putative tRNA synthetases class II (D, K and N) [uncultured marine
           microorganism HF4000_APKG5H11]
          Length = 509

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 94/369 (25%), Positives = 165/369 (44%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWWNRDF--HYRRR------------PFLLKRNMIQSSLREYFVENQFIEIDS 46
           M  +P +    +D    YR+R            P  + R+ +   +R +  +  F+E+D+
Sbjct: 140 MRPLPEKWHGLKDVETRYRQRYLDLIANQDEVMPVFVLRSKVVRGIRRFLDDRGFLEVDT 199

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             L        H + F T     + + + LYL+ + E   K+L+  G +K++     +RN
Sbjct: 200 PILVPVAAGA-HAKPFVTH---HNALDQQLYLRIATELYLKRLIIGGFDKVYEIGRVFRN 255

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEP 165
                 H PEFT+LE Y A+  Y  +M+    ++   A         +  +   +     
Sbjct: 256 EGIDQDHNPEFTLLESYEAYADYNDVMEMVEQMVSTIAIEVNGSTKVTIGDQVIDFAPPW 315

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + +++ E   + + ID        +  D   L  +A + GI     ++   +  ++L   
Sbjct: 316 QRVSLREELEKRSGID-------LESFDDDALRQKAGEMGIDTKVLESRGRLIDKLLSTF 368

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP+  +   T +  YP   S LA   P  P + +RFE +A  +E+ N+  EL DP  QR
Sbjct: 369 VEPH--LIQPTFVLDYPEEMSPLAKAKPDAPGYVERFEAFAFGMEIANSYSELNDPKVQR 426

Query: 286 HRFEKEMQEKKKIYNETYPI-DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
            RFE + Q +    NE     D+DFL  +   MP + G+ +G DRLVML+ G  +I +V+
Sbjct: 427 ERFEAQEQIQALYENEDVDRQDDDFLTAMEYGMPPTGGLGIGIDRLVMLLAGQRSIRDVL 486

Query: 344 WTPFSQSNQ 352
             P  ++ Q
Sbjct: 487 LFPQMRTQQ 495


>gi|71417041|ref|XP_810455.1| lysyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70874987|gb|EAN88604.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 580

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 89/375 (23%), Positives = 155/375 (41%), Gaps = 33/375 (8%)

Query: 2   HQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P   +     +  +R+R              + R+ +   +R +F +  F+E+++  
Sbjct: 193 HMLPDGWYGLSSIEQRFRQRYLDFIVNRENIQTFVTRSKVIRYIRNFFEDLNFLEVETPV 252

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L    G     R F T     + + + +YL+ +PE   K+L+  G ++++     +RN  
Sbjct: 253 LNQIAGGAA-ARPFITH---HNELNQRMYLRIAPELYLKELVVGGMDRVYELGKQFRNEG 308

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN---------- 158
               H PEFT +E Y A+  Y   M+   ++    A   +   F                
Sbjct: 309 IDLTHNPEFTSVEAYWAYADYNDWMRTTEDLFYGLAMHIHGTPFVKYAPKDSEGNQLAEV 368

Query: 159 -CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             N     + + +     +  N+   T  +         L     +  +      T + +
Sbjct: 369 VFNFNKPFKRLYIIPELEKRTNVKFPT--EFESDSSNAFLQELCSKHEVECTPPLTTARL 426

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              ++   +EP       T +  +P   S LA  +  DP+ T+RFEL+    ELCNA  E
Sbjct: 427 LDALISHYLEPEC--QDPTFVCDHPRVMSPLAKWHRNDPQLTERFELFLNKKELCNAYTE 484

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGA 336
           L +PI QR  F K+++ K+K  +E   IDE F+  L   +P + G  +G DRLVM +T  
Sbjct: 485 LNNPIVQREEFMKQLRNKEKGDDEAMDIDEGFVQALEHALPPTGGWGLGIDRLVMFLTSQ 544

Query: 337 NNINEVIWTPFSQSN 351
            NI EV+  P  +  
Sbjct: 545 ANIKEVLLFPAMKPE 559


>gi|302878949|ref|YP_003847513.1| lysyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302581738|gb|ADL55749.1| lysyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 507

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R  I  ++RE+F+ + ++E+++ 
Sbjct: 153 LRPLPEKFHGLADQEQKYRQRYLDLITNPDARHVFVTRTKIIQAIREFFIHHGYLEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 213 MMHSIPGGAS-AKPFETH---HNALDMQMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  LM     ++R  A       I S+Q    +      
Sbjct: 269 GLSTRHNPEFTMLEFYEAYRDYNYLMGFTEKLLREVARKVLGTTIVSYQGRELDLGKPFH 328

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y               DR  +  + Q    +    D    +   +  E  
Sbjct: 329 RLTMVQAIQKY-----HPQFSTEQLHDRDFVLTELQDLKAKHNPKDCLGGLQLSLFEELS 383

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    A+P  T+RFEL+    EL N   EL D  +Q  
Sbjct: 384 E--TLLFEPTFIIDYPVEVSPLARSSDANPAITERFELFVLGRELANGFSELNDAEDQEA 441

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K+    E    D D++  L   +P ++G  +G DRL+M++T +++I +VI  
Sbjct: 442 RFDAQVIAKEAGDEEAMFKDNDYIRALEYGLPPTAGEGIGIDRLIMMLTDSSSIRDVILF 501

Query: 346 PFSQSN 351
           P  +  
Sbjct: 502 PQMRPE 507


>gi|229551628|ref|ZP_04440353.1| lysine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|229315032|gb|EEN81005.1| lysine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
          Length = 499

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 156/365 (42%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR  I S++REY   + F+E+++ 
Sbjct: 147 LRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVREYLDNHGFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 207 VLHNQAGGA-NARPFITH---HNALDIDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+     +M +   I R AA         ++Q ++ +  +   
Sbjct: 263 GIDTKHNPEFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLTYQGMDIDLDAPFA 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +              A    +          I S    + +
Sbjct: 323 RINMLDAIKDKTGVDFWPEMTV------DEARKLADDHEVHYEPYWKVGHIISAFFDQFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RF +RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EST--LIQPTFITGHPIEVSPLAKKNPKDTRFVERFELFVGGGEYANAFTELNDPIDQRQ 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  EK     E   ID+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 435 RFEAQAAEKTAGNEEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 494

Query: 346 PFSQS 350
           P  + 
Sbjct: 495 PTLRP 499


>gi|269837140|ref|YP_003319368.1| lysyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786403|gb|ACZ38546.1| lysyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 513

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 160/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++  P +    +D    YR+R              + R     ++R +  E  F+E+++ 
Sbjct: 141 INPPPEKWHGLQDVETRYRQRYADLMANEETRRIFVIRANAIRAIRRFLDERGFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F+T     + + +  YL+ + E   K+LL  G E+++  A  +RN 
Sbjct: 201 VLQPLYGGAA-ARPFTTYY---NALDQTFYLRIADELYLKRLLVGGYERVYEIAKDFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y  +M+    +    A +       ++     +      
Sbjct: 257 GIDARHSPEFTMLEFYMAYADYHDVMELVEEMFVYVAEQALGTTKLTYAGHEIDLTPPWP 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      ID        +  D+  LY +A+  G  V     W  I   ++   +
Sbjct: 317 RVPLRQALIDATGIDYR------EVTDQRELYERAKALGADVEPTTVWPRIIDELMKTFV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
            PN  +   T L  YP   S LA   P DP   +RF+ +   +E+ NA  EL DP++Q  
Sbjct: 371 RPN--LIQPTFLVDYPVELSPLAKRSPEDPSIAERFQPFIAGMEMGNAFTELNDPMDQLE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +++     E  PID+DF+  L   MP + G  +G DRL ML+T   NI EVI  
Sbjct: 429 RFLAQARDRAAGDLEAMPIDDDFINALMYGMPPTGGFGLGIDRLTMLLTDQQNIREVILF 488

Query: 346 PFSQSN 351
           P  +S 
Sbjct: 489 PHLRSK 494


>gi|321262346|ref|XP_003195892.1| lysine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317462366|gb|ADV24105.1| Lysine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 630

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 83/374 (22%), Positives = 159/374 (42%), Gaps = 31/374 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +     + +  YR+R              + R+ + + +R+Y     F+E+++ 
Sbjct: 240 LHLLPGRE-GVVDLETRYRKRYLDLIMNPSTRDIFVTRSKVINYIRKYLDAQGFLEVETP 298

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+L+ +PE   K+L+  G +++F     +RN 
Sbjct: 299 MMSMIAGGAT-AKPFVTH---HNDLKLDLFLRIAPELYLKELVVGGLDRVFEIGRVFRNE 354

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ----------KIFSFQNV 157
           +    H PEF++ E+Y A+     +M     +I    +              K    +  
Sbjct: 355 QIDMTHNPEFSICEFYMAYADMYDIMDMTEELIEGMVKSLTGGTKLTFHPQGKGEGKKVY 414

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +     +   +     +  N+         D      L    ++  +  +   T + +
Sbjct: 415 EVDFARPWKRFDMIGELEKQLNVKFPPGETLHDDNANKFLRELCEKHNVDCSEPKTNARL 474

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             +++ E IE        + +  +P   S LA    + P   +RFE + C  E+CNA  E
Sbjct: 475 LDKLVGEYIENQCV--NPSFIVGHPQVMSPLAKYDRSRPGLCERFEAFICTKEICNAYTE 532

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DP +QR RF +++++K++   E   +DE FL  L   +P + G  +G DRLVM +T  
Sbjct: 533 LNDPFDQRERFMEQVKQKEQGDEEAQGVDETFLDALEYGLPPTGGWGLGIDRLVMFLTDC 592

Query: 337 NNINEVIWTPFSQS 350
           +NI EV+  P  + 
Sbjct: 593 SNIKEVLLFPAMRP 606


>gi|258540705|ref|YP_003175204.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|257152381|emb|CAR91353.1| Lysyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 498

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 156/365 (42%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR  I S++REY   + F+E+++ 
Sbjct: 146 LRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVREYLDNHGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 206 VLHNQAGGA-NARPFITH---HNALDIDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+     +M +   I R AA         ++Q ++ +  +   
Sbjct: 262 GIDTKHNPEFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLTYQGMDIDLDAPFA 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +              A    +          I S    + +
Sbjct: 322 RINMLDAIKDKTGVDFWPEMTV------DEARKLADDHEVHYEPYWKVGHIISAFFDQFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RF +RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EST--LIQPTFITGHPIEVSPLAKKNPKDTRFVERFELFVGGGEYANAFTELNDPIDQRQ 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  EK     E   ID+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEAQAAEKTAGNEEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 493

Query: 346 PFSQS 350
           P  + 
Sbjct: 494 PTLRP 498


>gi|110003925|emb|CAK98265.1| lysyl-trna synthetase protein [Spiroplasma citri]
          Length = 500

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 160/369 (43%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YRRR              +KR+ I + +R++F    ++E+++ 
Sbjct: 144 LRALPDKYRGMTDIEEKYRRRYVDLITSTETKDIFIKRSKIIALMRDFFNSKGYLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     + F T     + +    YL+ + E   K+L+  G E ++     +RN 
Sbjct: 204 VLQPIHGGAA-AKPFVTH---HNTLDMDFYLRVATELPLKRLIVGGFEGVYEMGRLFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A++    +M+   + I   A  + N+    +  V  +     +
Sbjct: 260 GMDTRHNPEFTTVEIYVAYQDMNFMMQLTEDTICYIAKNILNKNETEYDGVMISFQQPWK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEK 225
              + +A      ID    +   +          +++  + +     +   I +    E 
Sbjct: 320 RWHMVDAIKELVGIDFWKPMTFAE------AKKISKEKKVPIEKFHTSVGHIINLFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL +P+EQ 
Sbjct: 374 VEDK--LIQPTFIYGHPVEVSPLAKTNAEDPRFTDRFELFIKGREYANAYSELNNPVEQY 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  ++ E+    +E   +D DF+  L   MP + G+ +G DRLVML+TG ++I +V+ 
Sbjct: 432 DRFVSQLAERDNGNDEAQELDIDFIEALEYGMPPTGGLGIGIDRLVMLLTGQDSIKDVLL 491

Query: 345 TPFSQSNQE 353
            P  +S  +
Sbjct: 492 FPHMRSRGK 500


>gi|264677131|ref|YP_003277037.1| lysyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207643|gb|ACY31741.1| lysyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 514

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 158/368 (42%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRD----FHYRR---------RPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D       R          R   + R+   + +R++ VE+ F+E+++ 
Sbjct: 157 LRPMPDKFHGMADLEQKVRQRYVDLMTDEEARKRFVARSKAVAGIRDFMVEHGFLEVETP 216

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 217 MLHPIPGGA-NAKPFITH---HNALDQEMYLRIAPELYLKRLIVGGFERVFEINRNFRNE 272

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y+ LM     +IR AA         S+     +     E
Sbjct: 273 GISVRHNPEFTMMEFYAAYWNYQDLMDYTEKLIRDAAMKAVGTLELSYGGKPVDLAKPFE 332

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y            +  +R  L    ++ G++   D   +   + + +   
Sbjct: 333 RLTIPEAIVKYTE-------AGDNVGNREWLTNALKKLGMKEDKDKLSTRTLASLQVLYF 385

Query: 227 EP--NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E      +   T +  +P   S LA      P  T+RFELY    E  N   EL D  +Q
Sbjct: 386 EEVVEDKLWNPTFIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELNDAEDQ 445

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  +++ K    +E    D DF+  L   MP + G  +G DR +ML+T + +I +VI
Sbjct: 446 AARFNAQVEAKDSGDDEAMYFDHDFVRALEYGMPPTGGCGIGIDRFMMLLTDSASIRDVI 505

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 506 LFPALRRE 513


>gi|154249833|ref|YP_001410658.1| lysyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769382|sp|A7HM68|SYK_FERNB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|154153769|gb|ABS61001.1| lysyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 509

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 160/368 (43%), Gaps = 30/368 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I   +RE+  +  F E+++ 
Sbjct: 134 LRPMPEKWHGIKDKEVLYRQRYVDMIANDETIKRFRMRSDIIRMIREFLTKKGFFEVETP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQY  G  +  R F T L   + +   +YL+ + E   K+ +  G +K++     +RN 
Sbjct: 194 ILQYLTGGAS-ARPFITHL---NALDIDMYLRIATELHLKRFIVGGFDKVYEIGKIFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  YE +M     +I    E        ++Q    +      
Sbjct: 250 GISYKHHPEFTSIELYQAYADYEDMMNLTEELITYLVEQLYGTTKITYQGQEIDFTRPWR 309

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D+    D         +     + G+ V  +D    +  ++    +
Sbjct: 310 RVKMRDFIKENLGVDIIEDSD-------ETMAKVLAENGVEVDIND-RGHMIEKLWD-LV 360

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +P   S LA  +  DPR T+RFEL     E+ NA  EL DP++Q  
Sbjct: 361 EDK--VIQPTFLLEHPVEISPLAKKHREDPRVTERFELIIYGREMANAFSELNDPVDQLE 418

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++ +     E   +D+DF+  L   MP + G+ +G DRLVML+T + NI +VI  
Sbjct: 419 RFMNQLRLRDLGDQEAQMLDKDFVRALEYGMPPTGGLGIGIDRLVMLLTDSANIRDVIAF 478

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 479 PLVRPEGD 486


>gi|288799729|ref|ZP_06405188.1| lysine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332977|gb|EFC71456.1| lysine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 577

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 91/374 (24%), Positives = 148/374 (39%), Gaps = 35/374 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR     +LR+      
Sbjct: 141 LKPLPIVKYKDDVAYDKFDDPELRYRQRYVDLVVNDGIKDTFLKRATAIKTLRDVLDAAG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 201 YTEVETPTLQQIAGGAS-ARPFITHF---NALNTEMYMRIATELYLKRLIVGGFEGVYEI 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     ++       N    +  +    
Sbjct: 257 GKNFRNEGMDKTHNPEFTCMELYVQYKDYNWMMDFTEKLLETICIAVNGSAETVVDGKTI 316

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            F      + + +A       DL              +     +  + V        +  
Sbjct: 317 SFKAPYRRLPILDAIKEKTGYDLNG-------LSEEEIREVCNKLNLEVDESMGKGKLID 369

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L   + + P  T+RFEL     EL NA  EL 
Sbjct: 370 EIFGEFCE--GSFIQPTFITDYPVEMSPLTKKHRSKPGLTERFELMVNGKELANAYSELN 427

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF ++M+   K  +E   ID+DFL  L   MP +SGI +G DR+VML+TG   
Sbjct: 428 DPIDQEERFVEQMRLADKGDDEAMIIDKDFLRALQYGMPPTSGIGIGIDRMVMLMTGQTA 487

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  +
Sbjct: 488 IQEVLLFPQMRPEK 501


>gi|239995056|ref|ZP_04715580.1| lysyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 522

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 95/379 (25%), Positives = 160/379 (42%), Gaps = 35/379 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I + +R Y  E  ++E+++ 
Sbjct: 139 LRPLPEKFHGLSDQETKYRQRYVDLITSEQTRKTFMIRSKIVNGIRNYLTERDYLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MLQVIPGGAT-AKPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------- 157
                H PEFTMLE+Y+A+  Y  LM    +++R  AE                      
Sbjct: 255 GLSTRHNPEFTMLEFYQAYADYNDLMNLTEDMLRTLAEDILGTSIIKNTTKDAEGNVTSE 314

Query: 158 -NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDT 213
              +     + +++ EA  +Y        + +P+  +   L   A+Q  I+         
Sbjct: 315 VEYDFGKPFDRLSMGEAILKYWPEANEEAIRDPE-ANLDALKAMAKQLHIKEPEVDGIWG 373

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
                  I     E    +   T +  YP   S LA     +P  T RFE +    EL N
Sbjct: 374 AGKYLCEIFEATAEEK--LIQPTFITEYPWEVSPLARRNDNNPFITDRFEFFVGGRELAN 431

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              EL DP +Q  RF K+++EK    +E    D+D++  L   +P ++G  +G DRL ML
Sbjct: 432 GFSELNDPEDQAERFAKQVEEKDAGDDEAMHFDDDYIRALEYGLPPTAGEGIGIDRLAML 491

Query: 333 VTGANNINEVIWTPFSQSN 351
            T ++ I +VI  P  +  
Sbjct: 492 FTDSSTIKDVILFPHMKPQ 510


>gi|260944282|ref|XP_002616439.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238850088|gb|EEQ39552.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 590

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 29/373 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P++ +  +D    YR+R                R+ I S +R++     FIE+++ 
Sbjct: 214 LHMLPTEHYGFKDQEARYRKRYLDLIVNDSVRDRFKVRSAIISYIRKFLDSRDFIEVETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  + F T     + +   ++++ +PE   K+L+  G ++++     +RN 
Sbjct: 274 ILNVIAGGAT-AKPFVTH---HNDLNMEMFMRIAPELFLKELVVGGMDRVYEIGRQFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y+A+     LM     +     +          + +         
Sbjct: 330 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGDYKVTYHPDGPEGEALTL 389

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I + E   +  N+                L    +   +  A   T + +  
Sbjct: 390 DFARPWKRINMIEELEKIYNVKFPPGDQLHTAETGDFLKKLLKDNNLECAPPLTNARMLD 449

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL 
Sbjct: 450 KLVG---ELEDASINPTFIFGHPQMMSPLAKKDRKIPGLCERFEVFVATKEICNAYTELN 506

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE++ ++K +  +E   IDE F   L   +P ++G   G DRL M +T +N 
Sbjct: 507 DPFDQRARFEEQARQKDQGDDEAQLIDETFCNALEYGLPPTAGWGCGIDRLAMFLTNSNT 566

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 567 IREVLLFPTLKPD 579


>gi|288817495|ref|YP_003431842.1| lysyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288786894|dbj|BAI68641.1| lysyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751102|gb|ADO44585.1| lysyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 567

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 164/364 (45%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +H +P +    +D    YR+R   L            R+ + S +R++  E  FIE ++ 
Sbjct: 213 LHPLPEKWHGLKDVEVRYRQRYLDLISNEKARRITLLRSKLLSEIRKFLEERGFIEAETP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ+      + + F T     +++ + LYL+ +PE   K+L+  G  +++     +RN 
Sbjct: 273 VLQHIASGA-NAKPFIT---YHNYLEQNLYLRIAPELYLKRLIVGGFNRVYELGKNFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y A+  Y+ LM+    +     +        ++QN   +     +
Sbjct: 329 GVDTTHNPEFTMLEFYCAYWDYKDLMEFTQELFSHLLKKLVGSLKITYQNYTLDFTPPYK 388

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                +        D    L +        +   A + GI  A + T + +  +I    +
Sbjct: 389 VYRYFDLLLEKTGKDKDFFLRH-----EKEVRKLAAELGIPKAQELTHAKLLDKIFDVLV 443

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  +P   S LA  +  D    +RFEL+    E+ NA  EL DPIEQR 
Sbjct: 444 EDE--LIGPAFVIDFPKLLSPLAKTHREDEDLVERFELFVAGKEIANAYTELNDPIEQRD 501

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++EK+    E   +DEDF+  L   MP ++G  +G DRLVML+   ++I EVI  
Sbjct: 502 RFLQQIKEKEMGDEEAMQMDEDFITALEYGMPPTAGEGIGIDRLVMLLADVDSIREVILF 561

Query: 346 PFSQ 349
           P  +
Sbjct: 562 PALR 565


>gi|33596660|ref|NP_884303.1| lysyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|39932130|sp|Q7W8T6|SYK_BORPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33573361|emb|CAE37345.1| lysyl-tRNA synthetase [Bordetella parapertussis]
          Length = 506

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 155/368 (42%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+     +R+  +   F E+++ 
Sbjct: 147 LRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKAVGGIRQAMLNAGFFEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 207 MLHPIPGGAA-AKPFVTH---HNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  LM    ++IR AA  A    + S+Q+   +     +
Sbjct: 263 GVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAVLSYQDRELDLSQPFD 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
           ++T+ EA  +YA              D   +  + ++ G  V            + +   
Sbjct: 323 HLTICEAILKYA-----EGYTQAQLDDPAFVRAELRKLGANVEGPPLARAGLGALQLALF 377

Query: 227 EPNLG--INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E      +   T +  YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 378 EETAEARLWRPTYIIDYPVEVSPLARASDTRDGITERFELFITGREIANGFSELNDPEDQ 437

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  +++ K     E    D D++  L   MP + G  +G DRLVML+T + +I +VI
Sbjct: 438 AERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVI 497

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 498 LFPHLRRE 505


>gi|291086958|ref|ZP_06345000.2| lysine--tRNA ligase [Clostridium sp. M62/1]
 gi|291076478|gb|EFE13842.1| lysine--tRNA ligase [Clostridium sp. M62/1]
          Length = 500

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I   +R +     F+E+++ 
Sbjct: 145 LQILPEKFHGLTNTDMRYRQRYVDLIMNPEVKDTFIKRSQIVKEIRNFLDGRNFMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G   + R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 205 VLVANAGGA-NARPFQTHF---NALDEDVNLRISLELYLKRLIVGGMERVYEIGRVFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT+LE Y+A  +YE +M+    + R  A          +     +      
Sbjct: 261 GTDTKHNPEFTLLEVYQAFTNYEGMMELTETMFREVARKVLGTLQVEYDGEIIDLEKPFA 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +Y+ +D      + +          A++  I+        DI +    E +
Sbjct: 321 RITMIDAVKQYSGVDFREIHTDEE------AKAAAREHNIQFEARHKKGDILNLFFEEYV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L+   P DP +T+RFELY    E  NA  EL DPI+QR 
Sbjct: 375 EDK--LVQPTFVTDHPVDISPLSKRKPQDPEYTERFELYITRREFANAYSELNDPIDQRE 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +   K    +E   +DEDF+  L   MP + G+ +G DR VML+T +  I +V+  
Sbjct: 433 RFLAQEALKAAGDDEACSMDEDFINALMIGMPPTGGLGIGIDRFVMLLTNSYAIRDVLLF 492

Query: 346 PFSQS 350
           P  +S
Sbjct: 493 PTMKS 497


>gi|218128656|ref|ZP_03457460.1| hypothetical protein BACEGG_00227 [Bacteroides eggerthii DSM 20697]
 gi|217989111|gb|EEC55426.1| hypothetical protein BACEGG_00227 [Bacteroides eggerthii DSM 20697]
          Length = 574

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 89/355 (25%), Positives = 148/355 (41%), Gaps = 26/355 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +  YR+R               KR  I  ++R    E  + E+++  LQ  PG  +  
Sbjct: 161 DPELRYRQRYVDLIVNDGVKETFQKRATIIRTMRAALDEAGYTEVETPILQSIPGGAS-A 219

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F+T     + +   LYL+ + E   K+L+  G E ++     +RN      H PEFT 
Sbjct: 220 RPFTTH---HNSLDMDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNPEFTC 276

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           +E Y  ++ Y  +M     ++             +      +  +    + + +A     
Sbjct: 277 VELYVQYKDYNWMMGFTEKLLERICIAVNGGTETTIDGKTISFKAPYRRLPILDAIKEKT 336

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             DL              +    ++  + +        +   I  E  E        T +
Sbjct: 337 GYDLNG-------KSEEEIRQICRELKMEIDDTMGKGKLIDEIFGEFCEGT--FIQPTFI 387

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF+++++  +K 
Sbjct: 388 TDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFKEQLKLSEKG 447

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +E   ID+DFL  L   MP +SGI +G DRL ML+TG   I EV++ P  +  +
Sbjct: 448 DDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGQPFIQEVLFFPQMRPEK 502


>gi|50539832|ref|NP_001002386.1| lysyl-tRNA synthetase [Danio rerio]
 gi|49900533|gb|AAH76028.1| Lysyl-tRNA synthetase [Danio rerio]
          Length = 602

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 156/376 (41%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R+ I + LR +  +  F+EI++ 
Sbjct: 223 LHMLPHLHFGLKDKETRFRQRYLDLILNDFVRQKFVTRSKIITYLRSFLDQLGFLEIETP 282

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 283 MMNLIPGGAV-AKPFIT---YHNDLNMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 338

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 339 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGAYKVTYHPDGPEGQAYEI 398

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ +   +   +             R  L     Q  +      T + +  
Sbjct: 399 DFTPPFRRISMTQELEKELGVKFPPPDTYDSDEMRKFLDDLCVQKEVECPPPRTTARLLD 458

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ + +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 459 KLVGDFLEVKC--INPTYICDHPQIMSPLAKWHRSQKGLTERFELFVMKKEICNAYTELN 516

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI QR  FE++ + K +  +E   IDE F   L   +P ++G  MG DRL M +T +NN
Sbjct: 517 DPIRQRELFEQQAKAKAEGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 576

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +    +
Sbjct: 577 IKEVLLFPAMKPEDNK 592


>gi|15606442|ref|NP_213822.1| lysyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226183|sp|O67258|SYK_AQUAE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|2983651|gb|AAC07218.1| lysyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 597

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 90/363 (24%), Positives = 157/363 (43%), Gaps = 26/363 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +    +D    YR+R              + R  + + +R++F  + FIE+++ 
Sbjct: 236 LHPLPEKWHGLKDVEVRYRQRYLDLIANPEARRIFMLRTKLITEMRKFFEMHGFIEVETP 295

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ       + R F T     + +   LYL+ +PE   K+L+  G  +++     +RN 
Sbjct: 296 ILQPIASGA-NARPFVT---YHNFLETELYLRIAPELYLKRLIVGGFPRVYEIGKNFRNE 351

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  L+K   ++      +        +     +     +
Sbjct: 352 SVDRTHNPEFTMVEFYAAYWDYHDLIKFTEDMFVYLLEKTLGTLKVKYGEWELDFSPPFK 411

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +   +        D    L      D   L   A++  I      T + +  ++  +  
Sbjct: 412 KVRYFDLLKEKTGKDKDFFL-----KDLEGLRKLAKELEIPDVERMTHAKLLDKVFEKVA 466

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA  +  DP   +RFEL     E+ NA  EL DP +Q+ 
Sbjct: 467 EE--DLIQPTFVIDFPKILSPLAKTHREDPDLVERFELIIARYEVANAYTELNDPFDQKE 524

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++EK+    E   +DEDF+  L   MP ++G  +G DRLVM++   ++I EVI  
Sbjct: 525 RFLEQLKEKQMGDEEAMDMDEDFIRALEYGMPPTAGEGIGIDRLVMILANTDSIREVILF 584

Query: 346 PFS 348
           P  
Sbjct: 585 PQL 587


>gi|319763832|ref|YP_004127769.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330823904|ref|YP_004387207.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317118393|gb|ADV00882.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329309276|gb|AEB83691.1| lysyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 515

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 89/369 (24%), Positives = 157/369 (42%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+     +R + +E+ F+E+++ 
Sbjct: 158 LRPMPDKFHGVADQEVKYRQRYVDLMTDEAARRRFVARSKAIGGIRAFMIEHGFLEVETP 217

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + R F T     + + + ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 218 MLHPIPGGA-NARPFVTH---HNALEQEMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 273

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y  LM     ++R  A +  +    ++     +      
Sbjct: 274 GISVRHNPEFTMMEFYAAYWNYRDLMDFTEELVRDAALKATDTLQLTYGGRAVDLSQPFA 333

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y               D   L    ++ G+    D   +   + + +   
Sbjct: 334 RLTIREAIYQYTE-------AGAHVDDAAWLVSALKKLGMTEEKDRLSTRSLASLQVLYF 386

Query: 227 EPNLGI--NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E  +       T +  +P   S LA      P  T+RFELY    E  N   EL D  +Q
Sbjct: 387 EEEVEDKLWQPTFIMEHPTEISPLARANDLRPEVTERFELYITGREFGNGFSELNDAEDQ 446

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  ++  K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 447 AARFNAQVAAKDSGDDEAMFFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVI 506

Query: 344 WTPFSQSNQ 352
             P  +  Q
Sbjct: 507 LFPALRREQ 515


>gi|327313938|ref|YP_004329375.1| lysine--tRNA ligase [Prevotella denticola F0289]
 gi|326946154|gb|AEA22039.1| lysine--tRNA ligase [Prevotella denticola F0289]
          Length = 578

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 97/373 (26%), Positives = 157/373 (42%), Gaps = 33/373 (8%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR  +  ++R +F E  
Sbjct: 141 LKPLPVVKYKDGEAYDKFEDPEQRYRQRYVDLVVNDGVKDTFLKRATVLRTMRRFFDEAG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ  PG  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 201 YTEVETPTLQSIPGGAS-ARPFITHF---NALNIDMYMRIATELYLKRLIVGGFEGVYEI 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNC 159
              +RN      H PEFT +E Y  ++ Y  +M     ++       N K      +   
Sbjct: 257 GKNFRNEGMDRFHNPEFTCMELYVQYKDYNWMMSFTEQLLEKICTEVNGKPEVQMGDKTI 316

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    + + +A       DL       ++  RH+   + +  GI  +       +  
Sbjct: 317 SFKAPFRRLPILDAIKEKTGFDLAGKS---EEEIRHIAVDELKLEGIDESFGK--GKLID 371

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 372 EIFGEFCEGT--FIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 429

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF  +M    K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 430 DPIDQEERFLDQMHLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKEY 489

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 490 IQEVLLFPQMKPE 502


>gi|147903525|ref|NP_001080633.1| lysyl-tRNA synthetase [Xenopus laevis]
 gi|28838485|gb|AAH47965.1| Krs-1-prov protein [Xenopus laevis]
          Length = 605

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 155/376 (41%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R  + + LR++     F+EI++ 
Sbjct: 222 LHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFIVRAKLITYLRKFLDNLGFLEIETP 281

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 282 MMNIIPGGAV-AKPFIT---YHNDLDMKLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 337

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 338 GIDLTHNPEFTTCEFYMAYADYNDLMEITEKLLSGMVKHITGGYKVPYHPEGPEGPEYEI 397

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++     +     L  T     +  R LL     +  +      T + +  
Sbjct: 398 DFTPPFRRISMVHELEKALGKKLPPTDQFETEETRKLLDDICVEKEVECPAPRTTARLLD 457

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ + +E        T +  +P   S LA  + ++   T+RFEL+    E+CNA  EL 
Sbjct: 458 KLVGDFLEVTC--INPTFICDHPQIMSPLAKWHRSEKGLTERFELFVMKKEICNAYTELN 515

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP  QR  FE + + K    +E   IDE F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 516 DPFRQRELFEDQAKAKAAGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRVAMFLTDSNN 575

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +    +
Sbjct: 576 IKEVLLFPAMKPEDNK 591


>gi|87301696|ref|ZP_01084536.1| lysyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87283913|gb|EAQ75867.1| lysyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 506

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 157/367 (42%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R ++ S +R +  E QF+EI++ 
Sbjct: 146 LQPLPDKWHGLADVEKRYRQRYLDLVVSPQTRETFRRRALLVSGIRRWLDERQFLEIETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F+T     + +  PL L+ + E   K+L+  G E+++     +RN 
Sbjct: 206 VLNAEAGGA-DARPFTTH---HNTLDLPLVLRIATELHLKRLVVGGFERVYELGRIFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +I     +V       +Q    +      
Sbjct: 262 GVSTRHNPEFTTVEIYQAYADYTDMMVLTEELIASVCQQVCGTTAIEYQGTAIDLTPPWR 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
             T+ E   +   +D            R         AG+ V    D+   + +    ++
Sbjct: 322 RATMHELVEQATGLDFNGFSS------REQAAAAMAAAGLEVPEAADSVGRLLNEAFEQR 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E +  +   T +  YP   S LA  + + P   +RFEL+    E  NA  EL+DPI+QR
Sbjct: 376 VEDS--LIQPTFVTDYPVENSPLARAHRSKPGLVERFELFIVGRETANAFSELIDPIDQR 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E + + +     E + +DEDFL  L   MP + G+ +G DRL ML+T + +I +VI 
Sbjct: 434 RRLEAQQERRAAGDLEAHGVDEDFLHALEVGMPPTGGLGIGIDRLAMLLTDSPSIRDVIA 493

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 494 FPLLRPE 500


>gi|170092641|ref|XP_001877542.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647401|gb|EDR11645.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 626

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 157/381 (41%), Gaps = 33/381 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQ+PS  +  +D    YR+R                R+ I + +R +     F+E+++ 
Sbjct: 235 LHQLPSSHFGLKDQETRYRKRYLDLILNETTRNLFKTRSRILNYVRRFLDNLGFMEVETP 294

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
                 G  T  + F T     + +   LYL+ +PE   K+L+  G ++++     +RN 
Sbjct: 295 MTSMLAGGAT-AKPFITH---HNDLNLDLYLRIAPELYLKQLVVGGLDRVYEIGRVFRNE 350

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-------------AAEVANQKIFSF 154
                H PEFT+ E+Y A+   E LM     ++                    N+     
Sbjct: 351 GIDLTHNPEFTICEFYMAYADMEDLMDITEAMLEGLVVSLTGGSTKIIYHPDGNKGQEGA 410

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
           + +        +   +         +          +     L     +  +  +   T 
Sbjct: 411 RQLELEFKRPWKRHDMIGTLEEKLGVKFPPGETLHTEETNKWLRELCTKHNVECSEPRTN 470

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
           + +  +++ E IEP         +  +P   S LA  + + P   +RFE + C  E CNA
Sbjct: 471 ARMLDKLVGEFIEPLCVS--PAFIVGHPQVMSPLAKWHRSRPGLCERFEGFMCGKEFCNA 528

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLV 333
             EL DP EQR RFE+++++K++  +E   IDE F+  L   +  + G  +G DRLVM +
Sbjct: 529 YTELNDPFEQRLRFEEQVRQKEQGDDEAQGIDETFIDALEHGLAPTGGWGLGIDRLVMFL 588

Query: 334 TGANNINEVIWTPFSQSNQEE 354
           T + NI EV+  P  +  ++ 
Sbjct: 589 TDSTNIKEVLLFPAMKPVEQA 609


>gi|298479807|ref|ZP_06998007.1| lysine--tRNA ligase [Bacteroides sp. D22]
 gi|298274197|gb|EFI15758.1| lysine--tRNA ligase [Bacteroides sp. D22]
          Length = 575

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 91/359 (25%), Positives = 147/359 (40%), Gaps = 27/359 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              LKR  +  +LR    E  + E+++  LQ   G 
Sbjct: 157 DSFEDPELRYRQRYVDLVVNDGIKETFLKRATVVKTLRNVLDEAGYTEVETPILQSIAGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKTHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++       N            +  +    + + +A 
Sbjct: 273 EFTCMELYVQYKDYNWMMNFTEKLLERICIAVNGCTESVVDGKTISFKAPYRRLPILDAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEKIEPNLGIN 233
                 DL              +    ++  +  +        +   I  E  E      
Sbjct: 333 KEKTGYDLNG-------KSEEEIRQVCKELKMEEIDETMGKGKLIDEIFGEFCEGTY--I 383

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DP++Q  RF+++M+
Sbjct: 384 QPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPLDQEERFKEQMR 443

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
              K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   I EV++ P  +  
Sbjct: 444 LADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQTTIQEVLFFPQMRPE 502


>gi|317475550|ref|ZP_07934812.1| lysyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316908254|gb|EFV29946.1| lysyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 579

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 89/355 (25%), Positives = 148/355 (41%), Gaps = 26/355 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +  YR+R               KR  I  ++R    E  + E+++  LQ  PG  +  
Sbjct: 166 DPELRYRQRYVDLIVNDGVKETFQKRATIIRTMRAALDEAGYTEVETPILQSIPGGAS-A 224

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F+T     + +   LYL+ + E   K+L+  G E ++     +RN      H PEFT 
Sbjct: 225 RPFTTH---HNSLDMDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNPEFTC 281

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           +E Y  ++ Y  +M     ++             +      +  +    + + +A     
Sbjct: 282 VELYVQYKDYNWMMGFTEKLLERICIAVNGGTETTIDGKTISFKAPYRRLPILDAIKEKT 341

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             DL              +    ++  + +        +   I  E  E        T +
Sbjct: 342 GYDLNG-------KSEEEIRQICRELKMEIDDTMGKGKLIDEIFGEFCEGT--FIQPTFI 392

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF+++++  +K 
Sbjct: 393 TDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFKEQLKLSEKG 452

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +E   ID+DFL  L   MP +SGI +G DRL ML+TG   I EV++ P  +  +
Sbjct: 453 DDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGQPFIQEVLFFPQMRPEK 507


>gi|160889278|ref|ZP_02070281.1| hypothetical protein BACUNI_01700 [Bacteroides uniformis ATCC 8492]
 gi|156861285|gb|EDO54716.1| hypothetical protein BACUNI_01700 [Bacteroides uniformis ATCC 8492]
          Length = 576

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 90/359 (25%), Positives = 149/359 (41%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              LKR  +  ++R    E  + E+++  LQ  PG 
Sbjct: 157 DSFEDPELRYRQRYVDLIVNDGVKEKFLKRATVIKTMRAVLDEAGYTEVETPILQSIPGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AS-ARPFITH---HNSLDMDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++       N            +  +    + + EA 
Sbjct: 273 EFTCMELYVQYKDYNWMMSFTEKLLERICIAVNGCTETEIDGKTISFKAPYRRLPILEAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                 D        +      +    ++  + +        +   I  E  E       
Sbjct: 333 KEKTGYD-------LEGKSEDEIRQVCKELNMEIDDTMGKGKLIDEIFGEFCEGT--FIQ 383

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF+ +++ 
Sbjct: 384 PTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFKDQLRL 443

Query: 295 KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DFL  L   MP +SGI +G DRL ML+TG + I EV++ P  +  +
Sbjct: 444 SEKGDDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGESFIQEVLFFPQMRPEK 502


>gi|189463939|ref|ZP_03012724.1| hypothetical protein BACINT_00273 [Bacteroides intestinalis DSM
           17393]
 gi|189438512|gb|EDV07497.1| hypothetical protein BACINT_00273 [Bacteroides intestinalis DSM
           17393]
          Length = 580

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 88/359 (24%), Positives = 149/359 (41%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              LKR  +  ++R    E  + E+++  LQ   G 
Sbjct: 161 DSFEDPELRYRQRYVDLIVNDGVKDTFLKRATVIKTMRAVLDEAGYTEVETPILQSIAGG 220

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 221 AS-ARPFITH---HNSLNIDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP 276

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++          +  +      +  +    + + +A 
Sbjct: 277 EFTCMELYVQYKDYNWMMSFTEKLLERICIAVNGSEETTIDGKTISFKAPYRRLPILDAI 336

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                 DL              +    ++  + +        +   I  E  E       
Sbjct: 337 KEKTGYDLNG-------KSEEEIRQICKELKMEIDDTMGKGKLIDEIFGEFCEGT--FIQ 387

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF+ +++ 
Sbjct: 388 PTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFKDQLRL 447

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DFL  L   MP +SGI +G DRL ML+TG + I EV++ P  +  +
Sbjct: 448 SEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLTMLMTGKSYIQEVLFFPQMRPEK 506


>gi|94267598|ref|ZP_01290933.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
 gi|93451927|gb|EAT02649.1| Lysyl-tRNA synthetase, class-2 [delta proteobacterium MLMS-1]
          Length = 493

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 163/368 (44%), Gaps = 29/368 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I   +R++     F+E+++ 
Sbjct: 137 LRPLPEKFHGLTDIETRYRQRYVDLMVNPEVRDTFRRRVEIIHLVRDFLTNRGFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G  T  + F T     + +   LYL+ +PE   K+LL  G E++F     +RN 
Sbjct: 197 MMQAIAGGAT-AKPFKTH---HNALGLDLYLRIAPELYLKRLLVGGFERVFEINRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+ +Y++LM+    ++   A  V      ++Q    +      
Sbjct: 253 GLSTRHNPEFTMLEFYQAYATYDELMELAEEMLSWVAMEVCGTMQINYQGQEVDLAPPWR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ EA      +D           D   L   A + G+ +        + + +    +
Sbjct: 313 RYTMDEALVAVGGLD------AALLDDFAALKELALKKGVELQPQAGIGKVKTELFELLV 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFEL+    E+ NA  EL DP +QR 
Sbjct: 367 EDK--LIDPTFITAYPTEVSPLARRNQENPEITDRFELFITGREMANAFSELNDPDDQRQ 424

Query: 287 RFEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           R EK++ E+     E +P +DEDFL  L   MP ++G  +G DRL ML+T A +I +VI 
Sbjct: 425 RLEKQIAER-GSDEEIFPVLDEDFLRALEYGMPPAAGCGVGIDRLTMLLTDAPSIRDVIL 483

Query: 345 TPFSQSNQ 352
            P  +  +
Sbjct: 484 FPHLRPEK 491


>gi|306833932|ref|ZP_07467056.1| lysine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423933|gb|EFM27075.1| lysine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 496

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 153/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETKYRKRYLDLVSNRESFERFVTRSKIISEIRRYLDGLGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQDMDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ A++        S+Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFKDIMDLTEGIIQHASKAVKGDGPISYQGTEIAIDKPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +              A++  + V    T    I +    E 
Sbjct: 320 RVHMVDAIKEVTGVDFWKEMT------LEEAQAIAKEKNVPVEKHFTSVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVEVSPLAKKNAEDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|152990921|ref|YP_001356643.1| lysyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422782|dbj|BAF70286.1| lysyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 502

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 171/367 (46%), Gaps = 26/367 (7%)

Query: 3   QIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     +++  YR+R              + R+ I S +R++F  + F+E+++  +
Sbjct: 143 PLPEKFHGLQDKELRYRQRYVDLIMNPEVKKVFMLRSRIVSLIRDFFESHGFLEVETPMM 202

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 203 HPIPGGA-NARPFITH---HNALGVDRYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 258

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFTM+E+Y A+ +YE LMK   ++     E  +  K  ++     +  +    I
Sbjct: 259 DATHNPEFTMIEFYWAYHTYEDLMKLTEDLFDYLFEKLSLPKKLTYGEHTIDFSTPFSKI 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +A      +      D  +  ++ + +L+ +      AH  +   + + +    +E 
Sbjct: 319 KYKDAIIEIGEV----PEDIVEDKEKIISFLKDKGIEPEFAHKMSLGALQAELFDNFVEE 374

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S LA     +P   +RFEL+    E+ N  +EL DP++Q  RF
Sbjct: 375 K--LINPTFITHFPIDISPLARRSDENPEIAERFELFIAGKEIANGFNELNDPLDQYERF 432

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + ++Q K+   +E   +DEDF+  L   MP ++G  +G DRLVML+T  ++I +VI  P 
Sbjct: 433 KAQVQAKEV-DDEAMHMDEDFVRALGYGMPPTAGEGIGIDRLVMLLTNQHSIRDVILFPA 491

Query: 348 SQSNQEE 354
            +  Q+E
Sbjct: 492 MKPIQKE 498


>gi|121605941|ref|YP_983270.1| lysyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120594910|gb|ABM38349.1| lysyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 521

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 158/368 (42%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   S +RE+ V N F+E+++ 
Sbjct: 164 LRPLPDKFHGMADQEVKYRQRYVDLIMDEAARKRFMARSKAVSGIREFMVANDFLEVETP 223

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + +YL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 224 MLHPIPGGA-NAKPFKTH---HNALDQEMYLRIAPELYLKRLIVGGFERVFEINRSYRNE 279

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A  +Y  LM     +IR AA+ V      S+     +     E
Sbjct: 280 GISVRHNPEFTMMEFYAAWWNYTDLMTFTEALIRDAAQKVCGSLQLSYAGKPVDLSQPFE 339

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  ++               D   L    ++ G+    +       + + +   
Sbjct: 340 RLTIREAILKHT-------EAGEQVDDAVWLTNALKKLGLNEEKNRLSGRSLASLQVLYF 392

Query: 227 EP--NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E      +   T +  +P   S LA      P  T+RFELY    E  N   EL D  EQ
Sbjct: 393 EELVEEKLWQPTFIMEHPTEISPLARANDERPEVTERFELYITGREFGNGFSELNDAEEQ 452

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  ++  K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 453 AVRFNAQVHAKDSGDDEAMFYDHDFIRALEYGMPPTGGCGVGIDRLMMLLTDSPSIRDVI 512

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 513 LFPALRRE 520


>gi|307822370|ref|ZP_07652602.1| lysyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736936|gb|EFO07781.1| lysyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 499

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 165/366 (45%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              L R+ + + +R++ +E  F+E+++ 
Sbjct: 144 LRPLPEKFHGIADQEIKYRQRYLDLIMSEQSRNTFLIRSKVVAYIRQFLIERDFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  R F+T     + +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 204 MMQMIPGGAT-ARPFTT---FHNALDMELYLRIAPELYLKRLVVGGFERVFEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM     ++R  A EV  Q   ++Q    +     +
Sbjct: 260 GLSTRHNPEFTMLEFYQAYAEYHDLMDLTEAMLRGVAVEVLGQTEITYQGEQYDFGKPFD 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV ++   +        L   +   R      A+   I V        I   I  + +
Sbjct: 320 RMTVFDSILHF-----NPDLTAENIATREAAVEVAKNLHIPVKDGYGLGKIQIEIFEKTV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 375 ESR--LMNPTFITAYPVEVSPLARRNDDNPHVTDRFEFFVGGREIANGFTELNDAEDQAA 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+K+++EK+   +E    D D++  L   MP ++G  +G DRLVML   A +I +V+  
Sbjct: 433 RFQKQVEEKEAGDDEAMHFDADYIVALEHGMPPTAGEGIGIDRLVMLFADAPSIRDVLLF 492

Query: 346 PFSQSN 351
           P  +  
Sbjct: 493 PHMRPK 498


>gi|257452680|ref|ZP_05617979.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|257466541|ref|ZP_05630852.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917696|ref|ZP_07913936.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059220|ref|ZP_07923705.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684896|gb|EFS21731.1| lysyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313691571|gb|EFS28406.1| lysyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 493

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 159/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              LKR MI   L++Y  +  F+E+++ 
Sbjct: 137 IRALPEKFHGLTDVETRYRKRYVDLIMNREVKETFLKRTMIIKELKKYLDDRGFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ +PE   KKL+  G +K++     +RN 
Sbjct: 197 MMHPIVGGAA-ARPFITH---HNTLDVDLYMRIAPELYLKKLIVGGFDKVYDLNKCFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A+  +  +M     +I    +  N       +       + + 
Sbjct: 253 GMSTRHNPEFTTVELYQAYADFNDMMDLTEGVITTLCDKVNGTYDITFDGVDLHLKDFKR 312

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKI 226
           + + +       +D                   A++  + +A        + +    +K 
Sbjct: 313 VHMVDLIKEVTGVDFWRK-----DITFEEAKAFAKEHHVEIADHMNSVGHVINEFFEQKC 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DP +QR 
Sbjct: 368 EEK--VIQPTFIYGHPVEISPLAKKNEEDPRFTDRFELFINAREYANAFSELNDPADQRS 425

Query: 287 RFEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           RFE +++E ++  +E  P ID+D++  L   +P + G+ +G DRLVML+TGA +I +VI 
Sbjct: 426 RFEAQVEEAERGNDEATPVIDDDYVEALEYGLPPTGGLGIGIDRLVMLLTGAPSIRDVIL 485

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 486 FPQMKPR 492


>gi|329666683|gb|AEB92631.1| lysyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 509

 Score =  322 bits (825), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 160/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++    +D    YR+R              + R  I  ++R Y     F+E+++ 
Sbjct: 137 LRPLPNKWDGLKDVEQIYRQRYLDLITNHDSYMRFVHRTQIIQAIRGYLNNRDFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+  G E+++     +RN 
Sbjct: 197 VLHNIPGGA-EARPFITH---HNALDIDLYMRIALELPLKRLIVGGMERVYEIGRVFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V +     ++Q  + +      
Sbjct: 253 GLDTKHNPEFTELETYAAYWDFHDVMDEAEGIIRAAAKVVSPDGKITYQGTDIDLGKPFR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D    +              A +  +          I +    E  
Sbjct: 313 RVHMVDLIKEKTGVDFWKPMTI------EEARKVADEHNVHYESYWKVGHIINAFFEEFG 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++    E  NA  EL DP +QRH
Sbjct: 367 E--GSIVQPTFVYGHPVEVSPLAKKNADDPRFTDRFEIFIMGAEYGNAFSELNDPDDQRH 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E++   +E   IDED+L  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 425 RFEDQMAEREAGNDEADMIDEDYLRAMEFGMPPTGGLGIGIDRLVMLLTDAPAIRDVLLF 484

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 485 PTMRPEKVE 493


>gi|224536085|ref|ZP_03676624.1| hypothetical protein BACCELL_00950 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522304|gb|EEF91409.1| hypothetical protein BACCELL_00950 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 580

 Score =  322 bits (825), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 88/359 (24%), Positives = 149/359 (41%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              LKR  +  ++R    E  + E+++  LQ   G 
Sbjct: 161 DSFEDPELRYRQRYVDLVVNDGVKETFLKRATVIKTMRAVLDEAGYTEVETPILQSIAGG 220

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 221 AS-ARPFITH---HNSLNMDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP 276

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++          +  +      +  +    + + +A 
Sbjct: 277 EFTCMELYVQYKDYNWMMSFTEKLLERICIAVNGSEETTIDGKTISFKAPYRRLPILDAI 336

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                 DL              +    ++  + +        +   I  E  E       
Sbjct: 337 KEKTGYDLNG-------KSEEEIRQVCKELKMEIDDTMGKGKLIDEIFGEFCEGT--FIQ 387

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF+ +++ 
Sbjct: 388 PTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFKDQLRL 447

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DFL  L   MP +SGI +G DRL ML+TG + I EV++ P  +  +
Sbjct: 448 SEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLTMLMTGKSYIQEVLFFPQMRPEK 506


>gi|332140696|ref|YP_004426434.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550718|gb|AEA97436.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 522

 Score =  322 bits (825), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 95/379 (25%), Positives = 160/379 (42%), Gaps = 35/379 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I + +R Y  E  ++E+++ 
Sbjct: 139 LRPLPEKFHGLSDQETKYRQRYVDLITSEQTRKTFMIRSKIVNGIRNYLTERDYLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 MLQVIPGGAT-AKPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------- 157
                H PEFTMLE+Y+A+  Y  LM    +++R  AE                      
Sbjct: 255 GLSTRHNPEFTMLEFYQAYADYNDLMNLTEDMLRTLAEDILGTSIIKNTTKDAEGNVTSE 314

Query: 158 -NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDT 213
              +     + +++ EA  +Y        + +P+  +   L   A+Q  I+         
Sbjct: 315 VEYDFGKPFDRLSMGEAILKYWPEADEAAIRDPE-ANLDSLKAMAKQLHIKEPEVDGIWG 373

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
                  I     E    +   T +  YP   S LA     +P  T RFE +    EL N
Sbjct: 374 AGKYLCEIFEATAEEK--LEQPTFITEYPWEVSPLARRNDNNPFITDRFEFFVGGRELAN 431

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              EL DP +Q  RF K+++EK    +E    D+D++  L   +P ++G  +G DRL ML
Sbjct: 432 GFSELNDPEDQAERFAKQVEEKDAGDDEAMHFDDDYIRALEYGLPPTAGEGIGIDRLAML 491

Query: 333 VTGANNINEVIWTPFSQSN 351
            T ++ I +VI  P  +  
Sbjct: 492 FTDSSTIKDVILFPHMKPQ 510


>gi|71994340|ref|NP_001022304.1| lysyl (K) tRNA Synthetase family member (krs-1) [Caenorhabditis
           elegans]
 gi|62630002|gb|AAX88810.1| Lysyl (k) trna synthetase protein 1, isoform c [Caenorhabditis
           elegans]
          Length = 514

 Score =  322 bits (825), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 88/374 (23%), Positives = 158/374 (42%), Gaps = 29/374 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R+ I + LR Y     F+E+++ 
Sbjct: 131 LHMLPHSHFGLKDKELRFRKRYLDLILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETP 190

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K L+  G ++++     +RN 
Sbjct: 191 IMNQIAGGAT-AKPFITH---HNDLDMNLFLRVAPELYHKMLVVGGIDRVYEVGRLFRNE 246

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y A+  YE +++   +++               +           
Sbjct: 247 GIDLTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVMSIKGTYKIEYHPNGPNTEPVYE 306

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +     + + + +  A      L        +  R +     +   +  +   T + + 
Sbjct: 307 VDFTPPFKRVHMYDGLAEKLGATLPDPSTLHTEEAREVFDKLCRDNNVDCSAPRTTARLL 366

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++ E +E        T L  +P   S LA  + + P  T+RFEL+A   E+ NA  EL
Sbjct: 367 DKLVGEYLEST--FISPTFLIGHPQIMSPLAKWHRSIPGLTERFELFAVTREIANAYTEL 424

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI QR RFE++ ++K    +E   IDE F   L   +P + G  MG DRL M++T  N
Sbjct: 425 NDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEYGLPPTGGWGMGIDRLSMILTDNN 484

Query: 338 NINEVIWTPFSQSN 351
           NI EV+  P  +  
Sbjct: 485 NIKEVLLFPAMRPE 498


>gi|317479626|ref|ZP_07938751.1| lysyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316904191|gb|EFV26020.1| lysyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 581

 Score =  322 bits (825), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 90/359 (25%), Positives = 149/359 (41%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              LKR  +  ++R    E  + E+++  LQ  PG 
Sbjct: 162 DSFEDPELRYRQRYVDLIVNDGVKEKFLKRATVIKTMRAVLDEAGYTEVETPILQSIPGG 221

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 222 AS-ARPFITH---HNSLDMDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP 277

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++       N            +  +    + + EA 
Sbjct: 278 EFTCMELYVQYKDYNWMMSFTEKLLERICIAVNGCTETEIDGKTISFKAPYRRLPILEAI 337

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                 D        +      +    ++  + +        +   I  E  E       
Sbjct: 338 KEKTGYD-------LEGKSEDEIRQVCKELNMEIDDTMGKGKLIDEIFGEFCEGT--FIQ 388

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF+ +++ 
Sbjct: 389 PTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFKDQLRL 448

Query: 295 KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DFL  L   MP +SGI +G DRL ML+TG + I EV++ P  +  +
Sbjct: 449 SEKGDDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGESFIQEVLFFPQMRPEK 507


>gi|307721320|ref|YP_003892460.1| lysyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306979413|gb|ADN09448.1| lysyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 506

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 158/366 (43%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     +++  YR+R                R+ + S  R +F +  F+E+++  +
Sbjct: 144 PLPEKFHGITDKEIRYRKRYLDLIMNSEVRKTFQIRSRVISLTRRFFEDKGFLEVETPMM 203

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 204 HPIAGGA-NAKPFVTH---HNALGVDRYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 259

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFT +E+Y A+++Y+ L++      +   E  +             F   + I 
Sbjct: 260 DATHNPEFTSIEFYWAYKTYKDLIEITKEYFQYLFEHLDLPTLLPYGDLEVNFDNFQEIP 319

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E+     ++    T       D+  +     + G+ V        +   +  E +E  
Sbjct: 320 LIESLTSIGDVPADVTR------DKEKIIAYLNEKGVTVKPGMNLGQLQGELFDEFVEEK 373

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  YP   S LA      P  T+RFEL+    E+ NA  EL DPI+Q  RFE
Sbjct: 374 --LIDPTFITEYPVEISPLARRSDEHPEITERFELFIAGREIANAFSELNDPIDQLSRFE 431

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +M  K+   +E + +D DF+  L   M  ++G  +G DRLVML+T  ++I +V+  P  
Sbjct: 432 GQMAAKESGDDEAHEMDSDFVEALSYGMAPTAGQGIGIDRLVMLLTNEHSIRDVLLFPAM 491

Query: 349 QSNQEE 354
           +   +E
Sbjct: 492 KPVTQE 497


>gi|163815695|ref|ZP_02207067.1| hypothetical protein COPEUT_01876 [Coprococcus eutactus ATCC 27759]
 gi|158449000|gb|EDP25995.1| hypothetical protein COPEUT_01876 [Coprococcus eutactus ATCC 27759]
          Length = 685

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R +     F+E+++ 
Sbjct: 180 LQMLPEKFHGLTDTDMRYRQRYVDLIMNQDSKEVFIKRSQILKEIRNFLAGRDFMEVETP 239

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 240 MLVSNAGGAA-ARPFETHY---NALDEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 295

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  Y  +M+   ++ R  A +V      S+  +  +     E
Sbjct: 296 GVDTRHNPEFTLMELYQAYTDYYGMMELTESMFRYLAEKVCGSTKISYNGIEIDFGKPFE 355

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y  +D           D       A +  +         DI +    E  
Sbjct: 356 RLTMVDAIKKYTGVDFDQV------ADDAEAKKIADEHHVEYEERHKKGDIVNLFFEEFC 409

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   T +  +P   S L    P+DP   +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 410 EEN--LIQPTFIMDHPIEISPLTKKKPSDPTKVERFELFINTWEMCNAYSELNDPIDQRE 467

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +        +E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 468 RFAAQDANAAAGDDEAEHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLF 527

Query: 346 PFSQS 350
           P  +S
Sbjct: 528 PTMKS 532


>gi|15672355|ref|NP_266529.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|38258400|sp|Q9CII7|SYK_LACLA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|12723244|gb|AAK04471.1|AE006274_5 lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326405950|gb|ADZ63021.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 494

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 159/365 (43%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              + R+ I S +R Y     ++E+++ 
Sbjct: 142 LRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISEIRRYMDGRGYLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   + L+ + E   K+L+  G EK++     +RN 
Sbjct: 202 VLNNEAGGAA-ARPFYTH---HNSLDIDMALRIATELHLKRLIVGGMEKVYELGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  +E +M     I +  A+ V  Q +  +     N   + +
Sbjct: 258 GMDMTHNPEFTTMESYEAYADFEDIMDLTEGIFQHVAKTVVGQDVLEYDGKEINVGGKFK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A    A +D    +   +          A++  I V    T    I +    + 
Sbjct: 318 RVHMVDAIKEVAGVDFWPEMTFEEAT------ALAKEHDIHVEKHFTSVGHIINEFFEKY 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA +   DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 372 VEET--LIQPTFVFGHPKEISPLAKMNEKDPRFTDRFELFINGKEYANAFSELNDPIDQL 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   +D D++  L   MP + G+ +G DRLVML TG  +I +V+ 
Sbjct: 430 ERFEAQAKAKELGDDEATGVDYDYVEALEHGMPPTGGLGIGIDRLVMLFTGTTSIRDVLL 489

Query: 345 TPFSQ 349
            P  +
Sbjct: 490 FPTMK 494


>gi|116511230|ref|YP_808446.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|122940346|sp|Q031U8|SYK_LACLS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116106884|gb|ABJ72024.1| Lysyl-tRNA synthetase (class II) [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 494

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 160/365 (43%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              + R+ I S +R Y     ++E+++ 
Sbjct: 142 LRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISEIRRYMDGRGYLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     + +   + L+ + E   K+L+  G EK++     +RN 
Sbjct: 202 VLNNEAGGAS-ARPFYTH---HNSLDIDMALRIATELHLKRLIVGGMEKVYELGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  +E +M     I +  A+ V  Q +  +     N   + +
Sbjct: 258 GMDMTHNPEFTTMESYEAYADFEDIMDLTEGIFQHVAKTVVGQDVLEYDGKEINVGGKFK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A    A +D    +   +          A++  I V    T    I +    + 
Sbjct: 318 RVHMVDAIKEVAGVDFWPEMTFEEAT------ALAKEHDIHVEKHFTSVGHIINEFFEKY 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA +   DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 372 VEET--LIQPTFVFGHPKEISPLAKMNEKDPRFTDRFELFINGKEYANAFSELNDPIDQL 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   +D D++  L   MP + G+ +G DRLVML TG  +I +V+ 
Sbjct: 430 ERFEAQAKAKELGDDEATGVDYDYVEALEHGMPPTGGLGIGIDRLVMLFTGTTSIRDVLL 489

Query: 345 TPFSQ 349
            P  +
Sbjct: 490 FPTMK 494


>gi|296089683|emb|CBI39502.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 83/365 (22%), Positives = 154/365 (42%), Gaps = 28/365 (7%)

Query: 9    WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
              +++  YR+R                R  I S +R +     F+E+++  +   PG   
Sbjct: 1166 LKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMMNMIPGGAA 1225

Query: 58   HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
              R F T     + +   LY++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 1226 -ARPFVTH---HNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 1281

Query: 118  TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
            T  E+Y A   Y  +M+    ++    +          +        +  +       I 
Sbjct: 1282 TTCEFYMAFADYNDVMELTEKMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPFRRID 1341

Query: 170  VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
            + E   + A++ +   L + +      L     +  I+     T + +  +++   +E  
Sbjct: 1342 MIEDLEKMADLSIPKDLSSDEAN--KYLVDACLKFDIKCPPPQTTARLLDKLVGHFLEEA 1399

Query: 230  LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                  T +  +P   S LA  + +    T+RFEL+    ELCNA  EL DP+ QR RF 
Sbjct: 1400 CV--NPTFIINHPEIMSPLAKWHRSKQSLTERFELFVNKHELCNAYTELNDPVVQRQRFA 1457

Query: 290  KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +++++++   +E   +DE F   L   +P + G  +G DRL M++T + NI EV+  P  
Sbjct: 1458 EQLKDRQSGDDEAMALDETFCMALEYGLPPTGGWGLGIDRLTMMLTDSQNIKEVLLFPAM 1517

Query: 349  QSNQE 353
            +   E
Sbjct: 1518 KPQDE 1522


>gi|319903118|ref|YP_004162846.1| lysyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319418149|gb|ADV45260.1| lysyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 576

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 93/374 (24%), Positives = 153/374 (40%), Gaps = 35/374 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR+ I  +LR    E  
Sbjct: 142 LKPLPIVKYKDGVAYDSFEDPELRYRQRYVDLIVNDGVKETFLKRSTIIKTLRAALDEAG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ   G  +  R F+T     + +   LYL+ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPILQSIAGGAS-ARPFTTH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     ++       N    +  +    
Sbjct: 258 GKNFRNEGMDKNHNPEFTCMELYVQYKDYNWMMSFTEKLLERICIAVNGCPETEIDGKTI 317

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            F      + + EA       D        +  +   +    +   + +        +  
Sbjct: 318 SFKAPYRRLPILEAIREKTGYD-------LEGKNEDEIRQVCKALKMEIDDTMGKGKLID 370

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 371 EIFGEFCEGT--FIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 428

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF+ +++  +K  +E   ID+DFL  L   MP +SGI +G DRL ML+TG   
Sbjct: 429 DPIDQEERFKDQLKLSEKGDDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGKAF 488

Query: 339 INEVIWTPFSQSNQ 352
           I EV++ P  +  +
Sbjct: 489 IQEVLFFPQMRPEK 502


>gi|226499084|ref|NP_001146902.1| lysyl-tRNA synthetase [Zea mays]
 gi|195604954|gb|ACG24307.1| lysyl-tRNA synthetase [Zea mays]
          Length = 614

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 83/364 (22%), Positives = 161/364 (44%), Gaps = 28/364 (7%)

Query: 9   WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R+ + S +R++  + +F+E+++  +    G   
Sbjct: 259 LRDQETRYRQRYLDIMVNHEVRHIFKTRSKVVSFIRKFLDDREFLEVETPMMNMIAGGAA 318

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   L+++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 319 -ARPFITH---HNELNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 374

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI--------FSFQNVNCNPFSEPEYIT 169
           T  E+Y A+  Y  LM+    ++    +               +   +  +       I 
Sbjct: 375 TTCEFYMAYADYNDLMELTETMLSGMVKELTGGYKIKYHANGVTNSPIEIDFTPPFRRID 434

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + +     AN+++   L + +      L     +  ++     T S +  +++   +E  
Sbjct: 435 MIKDLEAMANLNIPKDLASDEAN--RYLIEACAKYDVKCPPPQTTSRLLDKLVGHFLEET 492

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL DP+ QR RFE
Sbjct: 493 CV--NPTFIINHPEIMSPLAKWHRSRPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFE 550

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +++++++   +E   +DE F A L   +P + G  +G DRL ML+T + NI EV+  P  
Sbjct: 551 EQLKDRQSGDDEAMALDETFCAALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAM 610

Query: 349 QSNQ 352
           +  +
Sbjct: 611 KPQE 614


>gi|259501003|ref|ZP_05743905.1| lysine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302190548|ref|ZP_07266802.1| lysyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309803748|ref|ZP_07697834.1| lysine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|309804565|ref|ZP_07698630.1| lysine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|309808736|ref|ZP_07702622.1| lysine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|309809596|ref|ZP_07703453.1| lysine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871562|ref|ZP_07731655.1| lysine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312874310|ref|ZP_07734342.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|315653937|ref|ZP_07906853.1| lysine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325912448|ref|ZP_08174843.1| lysine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|329920483|ref|ZP_08277215.1| lysine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|259167697|gb|EEW52192.1| lysine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308164157|gb|EFO66418.1| lysine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308165957|gb|EFO68175.1| lysine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308167972|gb|EFO70104.1| lysine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308170077|gb|EFO72113.1| lysine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311090183|gb|EFQ48595.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092957|gb|EFQ51308.1| lysine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|315488633|gb|EFU78279.1| lysine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325475790|gb|EGC78961.1| lysine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|328936159|gb|EGG32612.1| lysine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 503

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 163/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R              L R  I  ++R+Y     F+E+++ 
Sbjct: 141 LRPLPDKYHGLQNVEQIYRQRYLDLISNQDSYKRFLNRTKIIQAIRDYLNSLDFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 201 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V ++    ++Q  + +      
Sbjct: 257 GLDTHHNPEFTELETYCAYWDFHDVMDEAEGIIRAAAKVVSEDGKINYQGTDIDLGKSFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +     + +D    + +            A++ GI+         + +    E  
Sbjct: 317 RVHMVDLIKEKSGVDFWQPMTD------DEAKKIAEEHGIQCEKFWKVGHVINAFFEEFC 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++    E  NA  EL DPI+QR 
Sbjct: 371 EGT--IVDPTFVYGHPVEISPLAKKNKKDPRFTDRFEIFILGKEYGNAFTELNDPIDQRQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDED++  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 429 RFEAQMAERAAGNDEADMIDEDYIRAMEFGMPPTGGLGIGIDRLVMLLTNAPAIRDVLLF 488

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 489 PTMRPER 495


>gi|320107678|ref|YP_004183268.1| lysyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319926199|gb|ADV83274.1| lysyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 561

 Score =  321 bits (824), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 95/389 (24%), Positives = 177/389 (45%), Gaps = 40/389 (10%)

Query: 1   MHQIPSQPWWNRDF--HYRRR--------------------------PFLLKRNMIQSSL 32
           M  +P +     D    YR+R                             +KR  +  +L
Sbjct: 167 MLPLPDKFHGLEDVELRYRQRYVDLFSDTGDFEGEGEEAKQTRLPARDVFVKRAAVLRAL 226

Query: 33  REYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAA 92
           R++F +  +IE+++  +Q   G     R F+T     + +   L+L+ +PE   K+L+  
Sbjct: 227 RKFFDDRGYIEVETPMMQPVAGGAA-ARPFTTH---HNALDLDLFLRIAPELYLKRLVVG 282

Query: 93  GEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
           G ++++     +RN      H PEFTMLE+Y+A+ +Y  LM+   +++   A+  N    
Sbjct: 283 GMDRVYEINRNFRNEGVSTRHNPEFTMLEFYQAYANYHDLMQITEDLVSFVAKEVNGTTI 342

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP-----DRHLLYLQAQQAGIR 207
           +    +     +   +++ EA  ++     G   ++ D       D  ++ L+A    + 
Sbjct: 343 TNFGGHEIDLGKWTKLSMREAIVKWWPAAAGAAPEHGDFAHPAKIDAMVMSLRATGLSMP 402

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
               D      + I     E +  +   TI+  +P   S L+ + P +P + +RFE Y  
Sbjct: 403 YVPADPLGKTIATIFETITEEH--LIQPTIIYDFPLAVSPLSKVKPDEPEWVERFEFYIG 460

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+ NA  EL DP++QR RFE ++ E+++  +E + +D D++  L   +P + G  +G 
Sbjct: 461 GFEVGNAFSELNDPVDQRARFEAQLGERERGDDEAHQMDADYVRALSYGLPPTGGEGIGI 520

Query: 327 DRLVMLVTGANNINEVIWTPFSQSNQEEI 355
           DRL M++TGA +I +VI  P  +   + I
Sbjct: 521 DRLTMVLTGAKSIRDVILFPLLRPQAKVI 549


>gi|294660221|ref|NP_852857.2| lysyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286866|sp|Q7NC34|SYK_MYCGA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|284811876|gb|AAP56425.2| lysyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930318|gb|ADC30257.1| lysyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 492

 Score =  321 bits (824), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 170/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +   P +     D   R R                + R+ I +++R+YF EN F+E+++ 
Sbjct: 139 LRVPPEKFHGIADEEIRSRKRYLDLVYNKESKERFVYRSKIIAAMRQYFNENGFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + + +  YL+ +PE   KKL+    EKI+     +RN 
Sbjct: 199 FLHAQIGGAA-AKPFVTRY---NALDRDYYLRIAPELPLKKLIVGSFEKIYEIGKCFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y A+  Y  +M+    II+  A+       + +N   +     + 
Sbjct: 255 GMDSTHNPEFTSVETYVAYVDYIYMMELTEAIIKYIAKAIGISHTNIKNETIDWNKPFKR 314

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEKI 226
           I + E   +   ID           D       A++  + V  H+ T   I +    E  
Sbjct: 315 IKMTELVKQETGIDFTQVKKIDQALD------LAKKHKVHVKEHEKTIGHIINLFFEEFC 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L+ +  +DPR+T+RFEL+A   EL N   EL DPI+QR 
Sbjct: 369 EKK--LVEPTFVTHHPVEISPLSKLDYSDPRYTERFELFAFGKELANGFSELNDPIDQRQ 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFEK+++EK+K  +E   +DEDFL  L   +P + G+ +G DRLVM++TG  +I ++++ 
Sbjct: 427 RFEKQLEEKQKGNDEASEMDEDFLEALENGLPPTGGLGIGVDRLVMMLTGTTSIRDILFF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PHVREE 492


>gi|312872573|ref|ZP_07732641.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311091935|gb|EFQ50311.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
          Length = 503

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 163/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R              L R  I  ++R+Y     F+E+++ 
Sbjct: 141 LRPLPDKYHGLQNVEQIYRQRYLDLISNQDSYKRFLNRTKIIQAIRDYLNSLDFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 201 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V ++    ++Q  + +      
Sbjct: 257 GLDTHHNPEFTELETYCAYWDFHDVMDEAEGIIRAAAKVVSEDGKINYQGTDIDLGKSFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +     + +D    + +            A++ GI+         + +    E  
Sbjct: 317 RVHMVDLIKEKSGVDFWQPMTD------DEAKKIAEEHGIQCEKFWKVGHVINAFFEEFC 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++    E  NA  EL DPI+QR 
Sbjct: 371 EGT--IVDPTFVYGHPVEISPLAKKNKKDPRFTDRFEIFILGKEYGNAFTELNDPIDQRQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDED++  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 429 RFEAQMAERAAGNDEADMIDEDYIRAMEFGMPPTGGLGIGIDRLVMLLTNAPAIRDVLLF 488

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 489 PTMRPER 495


>gi|319942341|ref|ZP_08016656.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804214|gb|EFW01114.1| lysyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 509

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 87/369 (23%), Positives = 158/369 (42%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              L R+   +++R + + ++F+E+++ 
Sbjct: 152 IRPLPDKHKGLQDTELCYRQRYVDLIMNEESRNRFLTRSKAIAAIRAFMLNHRFLEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MLHPIPGGA-NAKPFITH---HNALDMDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y  + +Y   M     ++R  A+      +  +Q    +      
Sbjct: 268 GVSVRHNPEFTMMEFYATYWTYRDQMDFTEELLRTVAKEATGSMVLQYQGHEIDLSKPFH 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T   A  ++A         + +  +   +  + ++ G  +  D     +   +  E  
Sbjct: 328 RLTPLAAIKKFA-----PNYTDEELNNPDFIRAELKRLGGEIPVDAGLGALQMALFEETA 382

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    ADP  T+RFELY    E  N   EL DP +Q  
Sbjct: 383 EAK--LIEPTFIIDYPVEISPLARASDADPEITERFELYIAGRETANGFSELNDPDDQAA 440

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +  +K    +E    D D++  L   +P ++G  +G DR +ML+T A  I +V+  
Sbjct: 441 RFRAQADKKSHGDDEAMYYDADYIRALEYGLPPTAGCGIGIDRFMMLLTDAPTIRDVLLF 500

Query: 346 PFSQSNQEE 354
           P  +    +
Sbjct: 501 PHMRPENTK 509


>gi|325913193|ref|ZP_08175563.1| lysine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477614|gb|EGC80756.1| lysine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 503

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 163/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R              L R  I  ++R+Y     F+E+++ 
Sbjct: 141 LRPLPDKYHGLQNVEQIYRQRYLDLISNQDSYKRFLNRTKIIQAIRDYLNSLDFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 201 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V ++    ++Q  + +      
Sbjct: 257 GLDTHHNPEFTELETYCAYWDFHDVMDEAEGIIRAAAKVVSEDGKINYQGTDIDLGKSFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +     + +D    + +            A++ GI+         + +    E  
Sbjct: 317 RVHMVDLIKEKSGVDFWQPMTD------DEAKKIAEEHGIQCEKFWKVGHVINAFFEEFC 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++    E  NA  EL DPI+QR 
Sbjct: 371 EGT--IVDPTFVYGHPVEISPLAKKNKKDPRFTDRFEIFILGKEYGNAFTELNDPIDQRQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDED++  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 429 RFEAQMAERAAGNDEADMIDEDYIRAMEFGMPPTGGLGIGIDRLVMLLTNAPAIRDVLLF 488

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 489 PTMRPER 495


>gi|157165521|ref|YP_001467461.1| lysyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|112800973|gb|EAT98317.1| lysyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 503

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 90/370 (24%), Positives = 162/370 (43%), Gaps = 27/370 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR++I S++R +F E  F+E+++ 
Sbjct: 141 ISPLPEKYHGLVDVETRYRQRYLDMIMNPEVRADFKKRSVIISTIRRFFEEKGFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + + F T     + +    YL+ +PE   K+L+  G E ++     +RN 
Sbjct: 201 MLHPIAGGA-NAKPFVT---FHNALGVERYLRIAPELYLKRLVVGGFEAVYEMNRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT +E+Y A+ +Y  LM    ++     E    +K+ +F  +  +     +
Sbjct: 257 GMDLTHNPEFTSIEFYWAYHNYHDLMGITEDLFNVILEKLGMEKVINFDGMEIDFSKPFK 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I+  +A      +            D+  +  + +  G           + + +    +
Sbjct: 317 RISYKKALVEIGGL------AEDIVSDKAKILAKLRADGFEANEKLDLGHLQAELFDNYV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     +P   +RFEL+    EL N  +EL DPI+Q +
Sbjct: 371 ESK--LIHPTFVIDYPISISPLSRRSDTNPDVAERFELFIAGRELANGFNELNDPIDQYN 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K    +E + +DED++  L   MP  +G  +G DRLVML+T   +I +V+  
Sbjct: 429 RFKAQIDAKNAGDDEAHEMDEDYVKALGYGMPPVAGEGIGIDRLVMLLTDKKSIRDVVLF 488

Query: 346 PFSQSNQEEI 355
           P  +  + EI
Sbjct: 489 PAMRPLKTEI 498


>gi|255732768|ref|XP_002551307.1| lysyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240131048|gb|EER30609.1| lysyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 595

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 81/373 (21%), Positives = 153/373 (41%), Gaps = 29/373 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P++ +  +D    YR+R                R+ I   +R++     F+E+++ 
Sbjct: 215 LHMLPTEHYGFKDQEARYRKRYLDLIMNDSSRERFRVRSKIIQYIRKFLDNRDFVEVETP 274

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  + F T     + +   ++++ +PE   K+L+  G E+++     +RN 
Sbjct: 275 ILNVIAGGAT-AKPFITH---HNDLNMEMFMRIAPELFLKELVVGGMERVYEIGRQFRNE 330

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y+A+     LM     +     +          +        +  
Sbjct: 331 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGDYVIKYHPEGPNGKEMTL 390

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I + E   +  N+          +     L    +   +  +   T + +  
Sbjct: 391 DFSRPWKRINMIEELEKVYNVKFPAGDQLHTEETGEFLKKVLKDNKLECSPPLTNARMLD 450

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL 
Sbjct: 451 KLVG---ELEDASINPTFIFGHPQMMSPLAKKDRNIPGLCERFEVFVATKEICNAYTELN 507

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE++ ++K +  +E   +DE F   L   +P ++G   G DRL M +T +N 
Sbjct: 508 DPFDQRARFEEQARQKAQGDDEAQMVDETFCNALEYGLPPTAGWGCGIDRLAMFLTDSNT 567

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 568 IREVLLFPTLKPD 580


>gi|116332751|ref|YP_794278.1| lysyl-tRNA synthetase (class II) [Lactobacillus brevis ATCC 367]
 gi|116098098|gb|ABJ63247.1| Lysyl-tRNA synthetase (class II) [Lactobacillus brevis ATCC 367]
          Length = 502

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 163/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWN--RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              LK   I+ ++REY     ++E+D+ 
Sbjct: 148 LRPLPDKYHGLTNPETIYRQRYLDLISNRESFDRFLKVTKIKKAIREYLDGEGYLEVDTP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     +    PLYL+ + E   K+L+  G EK++     +RN 
Sbjct: 208 VLQTEAGGA-EARPFITHS---NAFDIPLYLRIATELYLKRLIVGGFEKVYELGKDFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEF M+E Y A+  Y  +M    N+ R  A   N     ++Q  + +  S+ +
Sbjct: 264 GTDLRHNPEFNMVEVYTAYTDYTDVMDLVENLFRFVANKVNGSGKLTYQGKDIDLDSDFK 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      ID    + + D       +  A++ GI          I +    EK+
Sbjct: 324 RLHMVDAVKDVTGIDFWQPMSDED------AHKLAEENGIHCEPYWKVGHIINAFFEEKV 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +    +   T +  +P   S LA   P D RFT RFELY    E  NA  EL DPI+QR 
Sbjct: 378 QDT--LINPTFIYGHPLEISPLAKKNPKDGRFTDRFELYIDGNEYGNAFTELNDPIDQRQ 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  E+     E + IDED++  +   MP + G+ +G DR+ ML+T + +I +V+  
Sbjct: 436 RFESQDAERAAGNEEAHGIDEDYVEAMEYGMPPTGGLGIGIDRMTMLLTDSTSIRDVMLF 495

Query: 346 PFSQS 350
           P  + 
Sbjct: 496 PTMRP 500


>gi|159478809|ref|XP_001697493.1| lysyl-trna synthetase, LysRS [Chlamydomonas reinhardtii]
 gi|158274372|gb|EDP00155.1| lysyl-trna synthetase, LysRS [Chlamydomonas reinhardtii]
          Length = 591

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 90/375 (24%), Positives = 156/375 (41%), Gaps = 30/375 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H  PS  +  +D    YR+R                R  I   +R +     F+E+++ 
Sbjct: 218 LHMPPSAHFGLKDQETRYRQRYLDLIANSDVRSIFFTRAKIIQFVRRFLDTRGFLEVETP 277

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   LY++ +PE   K+L+  G E+++     +RN 
Sbjct: 278 MMNMIPGGAA-ARPFVTH---HNDLNMQLYMRIAPELFLKQLVIGGLERVYEIGRQFRNE 333

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--------NC 159
                H PEFT  E+Y+A+  Y+ L+     +I               +           
Sbjct: 334 GIDLTHNPEFTTCEFYQAYADYKDLLDLTEQMISQMVYEIKGSYKIAYHPDGPEKPAIEI 393

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++         + L   L++ +   R LL    +Q  +      T + +  
Sbjct: 394 DFSPPWRRISMVSGLEECLKVKLPADLESEEA--RLLLVKLCEQHNVNCPAPQTTARLLD 451

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  +   P  T+RFEL+    E+CNA  EL 
Sbjct: 452 KLVGEFLEEQCV--NPTFICDHPQLMSPLAKWHRELPNMTERFELFINKREVCNAYTELN 509

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP++QR  F  + + K +  +E   +DE F   L   +P + G  +G DR+ ML+T  NN
Sbjct: 510 DPLKQRELFGDQAKAKSQGDDEAMFVDEVFCTALEYGLPPTGGWGLGVDRMTMLLTDTNN 569

Query: 339 INEVIWTPFSQSNQE 353
           I EV+  P  +  ++
Sbjct: 570 IKEVLLFPAMKPEEQ 584


>gi|309806964|ref|ZP_07700946.1| lysine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308166584|gb|EFO68781.1| lysine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 503

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 162/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R              L R  I  ++R+Y     F+E+++ 
Sbjct: 141 LRPLPDKYHGLQNVEQIYRQRYLDLISNQDSYKRFLNRTKIIQAIRDYLNSLDFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 201 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V ++    ++Q  + +      
Sbjct: 257 GLDTHHNPEFTELETYCAYWDFHDVMDEAEGIIRAAAKVVSEDGKINYQGTDIDLGKSFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +     + +D    + +            A++ GI+         + +    E  
Sbjct: 317 RVHMVDLIKEKSGVDFWQPMTD------DEAKKIAEEHGIQCEKFWKVGHVINAFFEEFC 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++    E  NA  EL DPI+QR 
Sbjct: 371 EGT--IVDPTFVYGHPVEISPLAKKNKKDPRFTDRFEIFILGKEYGNAFTELNDPIDQRQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDED++  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 429 RFEAQMAERAAGNDEADMIDEDYIRAMEFGMPPTGGLGIGIDRLVMLLTNAPAIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PTMRPE 494


>gi|257064642|ref|YP_003144314.1| lysyl-tRNA synthetase (class II) [Slackia heliotrinireducens DSM
           20476]
 gi|256792295|gb|ACV22965.1| lysyl-tRNA synthetase (class II) [Slackia heliotrinireducens DSM
           20476]
          Length = 499

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               KR  I +++R Y     F  +++ 
Sbjct: 145 IRPLPEKFHGLADKETRYRQRYVDLVMNPDVRETFEKRFKILAAIRRYMEGQGFYAVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + + F T     + +    YL+ + E   K+LL  G E+++     +RN 
Sbjct: 205 MLHSIMGGA-NAKPFVTH---HNALDIDFYLRIATELPLKRLLVGGFERVYEMGRIFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   + + +    +I+ AA+         +Q    +   E E
Sbjct: 261 GMDPYHNPEFTTIEAYQAYSDLDGMKELTQGMIQFAAQEACGTLQIEYQGQAVDLSGEWE 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ +    YA  ++           R  L   A++ G  V        I S I    +
Sbjct: 321 SRTMCDLATEYAGEEVSFDRT------REELAAIAERGGAHVEDAWGKGKIISEIFEAYV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +     +  +P   S LA+  P +P  T RFEL+ C  E  NA  EL DP++QR 
Sbjct: 375 EDH--LIQPIFVTEHPLEISPLASKLPDNPELTARFELFICGHEYANAFTELNDPVDQRE 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +MQ K +   E    DED++  L   MP + G+ +G DRLVML+T +  I +V+  
Sbjct: 433 RFAAQMQAKVQGDEEAMGYDEDYIRALEYGMPPAGGVGLGIDRLVMLLTDSATIRDVLLF 492

Query: 346 PFSQSN 351
           P  +  
Sbjct: 493 PHMRPE 498


>gi|125623258|ref|YP_001031741.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|166229809|sp|A2RIA0|SYK_LACLM RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|124492066|emb|CAL96994.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070008|gb|ADJ59408.1| lysyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 494

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 160/365 (43%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              + R+ I S +R Y     ++E+++ 
Sbjct: 142 LRPLPEKFHGLTDTETRYRKRYLDLISNKESFNRFVTRSKIISEIRRYMDGRGYLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     + +   + L+ + E   K+L+  G EK++     +RN 
Sbjct: 202 VLNNEAGGAS-ARPFYTH---HNSLDIDMALRIATELHLKRLIVGGMEKVYELGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  +E +M     I +  A+ V  Q +  +     N   + +
Sbjct: 258 GMDMTHNPEFTTMESYEAYADFEDIMDLTEGIFQHVAKTVVGQDVLEYDGKEINVGGKFK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A    A +D    +   +          A++  I V    T    I +    + 
Sbjct: 318 RVHMVDAIKEVAGVDFWPEMTFEEAT------ALAKEHDIHVEKHFTSVGHIINEFFEKY 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA +   DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 372 VEET--LIQPTFVFGHPKEISPLAKMNEKDPRFTDRFELFINGKEYANAFSELNDPIDQL 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   +D D++  L   MP + G+ +G DRLVML TG  +I +V+ 
Sbjct: 430 ERFEAQAKAKELGDDEATGVDYDYVEALEHGMPPTGGLGIGIDRLVMLFTGTTSIRDVLL 489

Query: 345 TPFSQ 349
            P  +
Sbjct: 490 FPTMK 494


>gi|49619039|gb|AAT68104.1| lysyl-tRNA synthetase [Danio rerio]
          Length = 577

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 157/376 (41%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R+ I + LR +  +  F+EI++ 
Sbjct: 198 LHMLPHLHFGLKDKETRFRQRYLDLILNDFVRQKFVTRSKIITYLRSFLDQLGFLEIETP 257

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 258 MMNLIPGGAV-AKPFIT---YHNDLNMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 313

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 314 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGAYKVTYHPDGPEGQAYEI 373

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ +   +   +             R  L     Q  +      T + +  
Sbjct: 374 DFTPPFRRISMTQELEKELGVKFPPPDTYDSGEMRKFLDDLCVQKEVECPPPRTTARLLD 433

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ + +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 434 KLVGDFLEVKC--INPTYICDHPQIMSPLAKWHRSQKGLTERFELFVMKKEICNAYTELN 491

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI QR  FE++ + K +  +E   IDE F A L   +P ++G  MG DRL M +T +NN
Sbjct: 492 DPIRQRELFEQQAKAKAEGDDEAMFIDETFCAALEYGLPPTAGWGMGIDRLTMFLTDSNN 551

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +    +
Sbjct: 552 IKEVLLFPAMKPEDNK 567


>gi|199598782|ref|ZP_03212194.1| Lysyl-tRNA synthetase (class II) [Lactobacillus rhamnosus HN001]
 gi|199590287|gb|EDY98381.1| Lysyl-tRNA synthetase (class II) [Lactobacillus rhamnosus HN001]
          Length = 498

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 157/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR  I S++REY   + F+E+++ 
Sbjct: 146 LRPLPDKWHGLTDVEQKYRKRYLDLISNPDSFDRFVKRTKIVSAVREYLDNHGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 206 VLHNQAGGA-NARPFITH---HNALDIDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+     +M +   I R AA         ++Q ++ +  +   
Sbjct: 262 GIDTKHNPEFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLTYQGMDIDLDAPFA 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D    +              A    +          I S    + +
Sbjct: 322 RINMLDAIKDKTGVDFWPEMSV------DEARKLADDHEVHYEPYWKVGHIISAFFDQFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRF +RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EST--LIQPTFITGHPIEVSPLAKKNPKDPRFVERFELFVGGGEYANAFTELNDPIDQRQ 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +  EK     E   ID+D++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEAQAAEKTAGNEEAQGIDDDYVEVLEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 493

Query: 346 PFSQS 350
           P  + 
Sbjct: 494 PTLRP 498


>gi|171056979|ref|YP_001789328.1| lysyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|170774424|gb|ACB32563.1| lysyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 514

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 86/366 (23%), Positives = 161/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+   +S+R + +E+QF+E+++ 
Sbjct: 160 LRPMPDKHHGMTDQEQKYRQRYVDLMTDDSARERFRARSKAVASIRGFMLEHQFLEVETP 219

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 220 MLHPIPGGA-NAKPFVTH---HNALDQEMFLRIAPELYLKRLVVGGFERVFEINRNFRNE 275

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ ++  LM     ++R AA +       S+     +      
Sbjct: 276 GISVRHNPEFTMMEFYAAYWNHHDLMDFTEQLLRHAATQATGSARVSYAGKPVHLDEPFA 335

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++   +A +         +  D  +++ +    G         + +   +    +
Sbjct: 336 RLSVRDSLVVHAGL------TEAEADDAAVIHAKLTSLGEEPPKHWKLAALQFGLFEAVV 389

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    A+P  T+RFEL+    E  N   EL D  +Q  
Sbjct: 390 EEK--LWQPTFIIDYPVEVSPLARASDANPSITERFELFITGREFGNGFSELNDAEDQAA 447

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K     E    D DF+  L   MP + G  +G DRL+ML+T + +I +V+  
Sbjct: 448 RFQSQVANKDAGDEEAMFYDADFIRALEYGMPPTGGCGIGIDRLMMLLTDSVSIRDVVLF 507

Query: 346 PFSQSN 351
           P  +  
Sbjct: 508 PALRRE 513


>gi|325270796|ref|ZP_08137387.1| lysine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324986912|gb|EGC18904.1| lysine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 578

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 97/373 (26%), Positives = 156/373 (41%), Gaps = 33/373 (8%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR  +  ++R +F E  
Sbjct: 141 LKPLPVVKYKDGEAYDKFEDPEQRYRQRYVDLVVNDGVKDTFLKRATVLRTMRRFFDEAG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ  PG  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 201 YTEVETPTLQSIPGGAS-ARPFITHF---NALNIDMYMRIATELYLKRLIVGGFEGVYEI 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNC 159
              +RN      H PEFT +E Y  ++ Y  +M     ++       N K      +   
Sbjct: 257 GKNFRNEGMDRFHNPEFTCMELYVQYKDYNWMMSFTEQLLEKICTEVNGKPEVQMGDKTI 316

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    + + +A       DL       ++  RH+   + +  GI  +       +  
Sbjct: 317 SFKAPFRRLPILDAIKEKTGFDLAGKS---EEEIRHIAVDELKLEGIDESFGK--GKLID 371

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 372 EIFGEFCEGT--FIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 429

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF  +M    K  +E   ID DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 430 DPIDQEERFLDQMHLADKGDDEAMIIDRDFLRALQYGMPPTSGIGIGIDRLVMLMTGKEY 489

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 490 IQEVLLFPQMKPE 502


>gi|284931085|gb|ADC31023.1| lysyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 492

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 171/366 (46%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +   P +     D   R R                + R+ I +++R+YF EN F+E+++ 
Sbjct: 139 LRVPPEKFHGIADEEIRSRKRYLDLVYNKESKERFVYRSKIIAAMRQYFNENGFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + + +  YL+ +PE   KKL+    EKI+     +RN 
Sbjct: 199 FLHAQIGGAA-AKPFITRY---NALDRDYYLRIAPELPLKKLIVGSFEKIYEIGKCFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y A+  Y  +M+    +I+  A+       + +N   +     + 
Sbjct: 255 GMDSTHNPEFTSVETYVAYVDYIYMMELTEALIKYIAKTIGISHTNIKNETVDWNKPFKR 314

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEKI 226
           I + E   +   ID        +  D       A++  + V  H+ T   I +    E  
Sbjct: 315 IKMTELVKQETGIDFTQVKKLDEALD------LAKKHKVHVKEHEKTIGHIINLFFEEFC 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L+ +  +DPR+T+RFEL+A   EL N   EL DPI+QR 
Sbjct: 369 EKK--LVEPTFVTHHPVEISPLSKLDYSDPRYTERFELFAFGKELANGFSELNDPIDQRQ 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFEK+++EK+K  +E   +DEDFL  L   +P + G+ +G DRLVM++TG  +I ++++ 
Sbjct: 427 RFEKQLEEKQKGNDEASEMDEDFLEALENGLPPTGGLGIGVDRLVMMLTGTTSIRDILFF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PHVREE 492


>gi|320547204|ref|ZP_08041498.1| lysine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448191|gb|EFW88940.1| lysine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 500

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 153/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 148 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDGLGFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G EK++     +RN 
Sbjct: 208 VLHNEAGGAA-ARPFVTH---HNAQDMDMVLRIALELHLKRLIVGGMEKVYEIGRVFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  ++ +M     II+ A+   N     ++Q          +
Sbjct: 264 GMDATHNPEFTMIELYQAYADFKDIMDITEGIIQNASAAVNGNGPITYQGTEIAIDKPFK 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            I + +A      +D    +              A++  + V    T    I +    E 
Sbjct: 324 RIHMVDAIKEVTGVDFWKEMT------LEEAQELAKEKNVPVEKHFTSVGHIINAFFEEF 377

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 378 VEET--LTQPTFVYGHPVEVSPLAKKNAEDPRFTDRFELFIMTKEYGNAYSELNDPIDQL 435

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   +D D++  L   MP + G+ +G DRLVML+T    I + + 
Sbjct: 436 ARFEAQAKAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDALL 495

Query: 345 TPFSQ 349
            P  +
Sbjct: 496 FPTMK 500


>gi|160871773|ref|ZP_02061905.1| lysyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120572|gb|EDP45910.1| lysyl-tRNA synthetase [Rickettsiella grylli]
          Length = 502

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 166/370 (44%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQPWW----NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEID 45
           +  +P +       +++  YR            R     R+ +   +R++     F+E++
Sbjct: 146 LRPLPDKFHGLSESDKEQRYRHRYLDLMTNEKTRKTFQIRSQLIQEIRQFLNRRGFLEVE 205

Query: 46  SMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
           +  +   PG     R F T     + +  PL+L+ +PE   K+L+  G EK+F    ++R
Sbjct: 206 TPMMHVLPGGA-LARPFITH---HNALNMPLFLRVAPELHLKRLVVGGMEKVFEINRSFR 261

Query: 106 NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSE 164
           N      H PEFTMLE+Y+A+  Y  LM     +IR  A+ +   +  ++Q    +    
Sbjct: 262 NEGLSTRHNPEFTMLEFYQAYSDYHDLMDLTEQLIRELAKTILTTEQLTYQGEIYDLSKP 321

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            + +T+ +A   Y            D  +   L   A  A + +   ++   +   +  E
Sbjct: 322 FKRLTMIDALLEY-----NPEWQLNDVTEFARLKKIA--ADLEIQPKESIGQLQFAVFEE 374

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +E    +   T + +YP   S LA     +P F  RFELY    EL N   EL DP +Q
Sbjct: 375 TVEEK--LKQPTFITQYPIVVSPLARRNSENPDFADRFELYIGGRELANGFSELNDPEDQ 432

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RF++++  K K  +E  P DE+++  L   +P ++G  MG DRL ML T + +I +VI
Sbjct: 433 RARFKQQLLAKSKGDSEAMPYDEEYIQALEYGLPPTAGEGMGIDRLTMLFTDSVSIRDVI 492

Query: 344 WTPFSQSNQE 353
             P  +   +
Sbjct: 493 LFPLMRPESD 502


>gi|325853895|ref|ZP_08171411.1| lysine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325484232|gb|EGC87162.1| lysine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 578

 Score =  321 bits (823), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 97/373 (26%), Positives = 157/373 (42%), Gaps = 33/373 (8%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR  +  ++R +F E  
Sbjct: 141 LKPLPVVKYKDGEAYDKFEDPEQRYRQRYVDLVVNDGVKDTFLKRATVLRTMRRFFDEAG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ  PG  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 201 YTEVETPTLQSIPGGAS-ARPFITHF---NALNIDMYMRIATELYLKRLIVGGFEGVYEI 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNC 159
              +RN      H PEFT +E Y  ++ Y  +M     ++       N K      +   
Sbjct: 257 GKNFRNEGMDRFHNPEFTCMELYVQYKDYNWMMSFTEQLLEKICTEVNGKPEVQMGDKTI 316

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  +    + + +A       DL       ++  RH+   + +  GI  +       +  
Sbjct: 317 SFKAPFRRLPILDAIKEKTGFDLAGKS---EEEIRHIAVDELKLEGIDESFGK--GKLID 371

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL 
Sbjct: 372 EIFGEFCEGT--FIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELN 429

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPI+Q  RF  +M    K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG   
Sbjct: 430 DPIDQEERFLDQMHLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKEY 489

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 490 IQEVLLFPQMKPE 502


>gi|261330188|emb|CBH13172.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 584

 Score =  321 bits (823), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 84/375 (22%), Positives = 154/375 (41%), Gaps = 33/375 (8%)

Query: 2   HQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P + +        +R+R              + R+ I S +R +F +  F+E+++  
Sbjct: 197 HMLPDEHYGLSSVEQRFRQRYLDLIVNRENAKTFILRSKIISYIRSFFDQKDFLEVETPM 256

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L    G     R F T     + + + +YL+ +PE   KKL+  G ++++     +RN  
Sbjct: 257 LNQIAGGAA-ARPFITH---HNELNQTMYLRIAPELYLKKLVVGGLDRVYEIGKQFRNEG 312

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV----------- 157
               H PEFT +E Y A+  Y   M+    ++               +            
Sbjct: 313 IDLTHNPEFTSVESYWAYADYNDWMETTEELLYGMVMHLYGSPIVKYSPRDSEGRQLPEV 372

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             N     + + +         +       + +     L     ++  +      T + +
Sbjct: 373 TFNFNRPFKRLHIVPKLEEILGLKFPADFYSSEANSFFL--DICKKNQVECNPPFTTTRL 430

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              ++   +EP       T L  +P   S LA  +  D R ++RFEL+    E+CN+  E
Sbjct: 431 LDALVSHYLEPQCHD--PTFLCDHPRIMSPLAKWHRNDLRLSERFELFINKKEICNSYTE 488

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L  P+ QR  FE+++++++K  +E   IDE ++  L   +P + G  +G DRLVM +T  
Sbjct: 489 LNSPLVQREEFERQLRDREKGDDEAMDIDEGYVQALEYALPPTGGWGLGIDRLVMYLTSQ 548

Query: 337 NNINEVIWTPFSQSN 351
           NNI EV+  P  +  
Sbjct: 549 NNIKEVLLFPAMKPE 563


>gi|312874830|ref|ZP_07734849.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311089575|gb|EFQ48000.1| lysine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
          Length = 503

 Score =  321 bits (823), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 163/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR+R              L R  I  ++R+Y     F+E+++ 
Sbjct: 141 LRPLPDKYHGLQNVEQIYRQRYLDLISNQDSYKRFLNRTKIIQAIRDYLNSLDFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     R F T     + +   LY++ + E   K+L+    E+++     +RN 
Sbjct: 201 VLHNIPGGA-EARPFITH---HNALDINLYMRIALELPLKRLIVGDMERVYEIGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+  +  +M +   IIR AA+V ++    ++Q  + +      
Sbjct: 257 GLDTHHNPEFTELETYCAYWDFHDVMDEAEGIIRAAAKVVSEDGKINYQGTDIDLGKSFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +     + +D    + +            A++ GI+         + +    E  
Sbjct: 317 RVHMVDLIKEKSGVDFWQPMTD------DEAKTIAEEHGIQCEKFWKVGHVINAFFEEFC 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFE++    E  NA  EL DPI+QR 
Sbjct: 371 EGT--IVDPTFVYGHPVEISPLAKKNKKDPRFTDRFEIFILGKEYGNAFTELNDPIDQRQ 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +M E+    +E   IDED++  +   MP + G+ +G DRLVML+T A  I +V+  
Sbjct: 429 RFEAQMAERAAGNDEADMIDEDYIRAMEFGMPPTGGLGIGIDRLVMLLTNAPAIRDVLLF 488

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 489 PTMRPER 495


>gi|323344925|ref|ZP_08085149.1| lysine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323094195|gb|EFZ36772.1| lysine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 578

 Score =  321 bits (823), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 93/376 (24%), Positives = 155/376 (41%), Gaps = 36/376 (9%)

Query: 1   MHQIPSQPWWN---------RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P   + +          +  YR+R              LKR +I  ++R    +  
Sbjct: 141 LKPLPIVKYKDGVAYDRFDDPELRYRQRYVDLVVNDGVKETFLKRAVILRTMRRILDDAG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 201 YTEVETPTLQNIAGGAS-ARPFITHF---NALNVDMYMRIATELYLKRLIVGGFEGVYEI 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M+    ++       N K     +    
Sbjct: 257 GKNFRNEGMDRTHNPEFTCIELYVQYKDYNWMMEFTEKMLETICIAVNGKPEQMIDGQLV 316

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIF 218
            F      + + +A       DL              +    ++  +    D      + 
Sbjct: 317 SFKAPYRRLPILDAIKEKTGYDLNG-------KTEEEIRSICKKLEMDGIDDTMGKGKLI 369

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL
Sbjct: 370 DEIFGEFCEGT--FIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSEL 427

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q  RF ++M+   K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG  
Sbjct: 428 NDPIDQEERFVEQMKLADKGDDEAMVIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKT 487

Query: 338 NINEVIWTPFSQSNQE 353
            I EV++ P  +  ++
Sbjct: 488 TIQEVLFFPQMKPEKK 503


>gi|260655067|ref|ZP_05860555.1| lysine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630178|gb|EEX48372.1| lysine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 507

 Score =  321 bits (823), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 167/367 (45%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I +S R     +  +E+++ 
Sbjct: 148 LRPLPEKWHGLSDMEVRYRKRYVDLIANPEVRDVFRRRAAIITSFRSTLESHGTLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L Y  G   + R F T     + +   +YL+ + E   K+L+     +++     +RN 
Sbjct: 208 VLSYLAGGA-NARPFITH---HNALDMDMYLRIAVELFHKRLVVGMMGRVYEIGKNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
               +H PEFTM+E Y  +  YE +M     +IR AA  +N K    +Q  + +  S   
Sbjct: 264 GMDLMHNPEFTMMEVYWPYCDYEVMMNLTEELIRNAAVASNGKAKIEWQGTSLDFESPFR 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             ++ E    +  +D  +  D            +A   G+ V   D+   I +  + E +
Sbjct: 324 RASMVELVKEHTGVDFSSLTD-------EEARKEAASRGLEVKPTDSRFKILTEFMEEFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P +P +T RFEL+ C  EL N   EL DP++Q+ 
Sbjct: 377 EDQ--LIQPTFVTGHPVEISPLAKKDPLNPDYTHRFELFCCGKELANGYSELNDPVDQKA 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +M++K +  +ET+P D DF+  L   +P + G+ +G DR++M +T + +I +VI+ 
Sbjct: 435 RFIDQMKKKSEGEDETHPYDADFVEALEQGLPPTGGLGIGMDRVIMFLTNSKSIRDVIFF 494

Query: 346 PFSQSNQ 352
           P  +  Q
Sbjct: 495 PTMKPLQ 501


>gi|270295934|ref|ZP_06202134.1| lysyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270273338|gb|EFA19200.1| lysyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 576

 Score =  321 bits (823), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 90/359 (25%), Positives = 150/359 (41%), Gaps = 26/359 (7%)

Query: 7   QPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
             + + +  YR+R              LKR  +  ++R    E  + E+++  LQ  PG 
Sbjct: 157 DSFEDPELRYRQRYVDLIVNDGVKEKFLKRATVIKTMRAVLDEAGYTEVETPILQSIPGG 216

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
            +  R F T     + +   LYL+ + E   K+L+  G E ++     +RN      H P
Sbjct: 217 AS-ARPFITH---HNSLDIDLYLRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDKNHNP 272

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEYITVAEAF 174
           EFT +E Y  ++ Y  +M     ++       N          + +  +    + + EA 
Sbjct: 273 EFTCMELYVQYKDYNWMMSFTEKLLERICIAVNGCTETEIDGKSISFKAPYRRLPILEAI 332

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                 D        +      +    ++  + +        +   I  E  E       
Sbjct: 333 KEKTGYD-------LEGKSEDEIRQVCKELNMEIDDTMGKGKLIDEIFGEFCEGT--FIQ 383

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF+ +++ 
Sbjct: 384 PTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSELNDPIDQEERFKDQLRL 443

Query: 295 KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +K  +E   ID+DFL  L   MP +SGI +G DRL ML+TG + I EV++ P  +  +
Sbjct: 444 SEKGDDEAMFIDQDFLKALQYGMPPTSGIGIGIDRLTMLMTGESFIQEVLFFPQMRPEK 502


>gi|154499801|ref|ZP_02037839.1| hypothetical protein BACCAP_03458 [Bacteroides capillosus ATCC
           29799]
 gi|150271399|gb|EDM98656.1| hypothetical protein BACCAP_03458 [Bacteroides capillosus ATCC
           29799]
          Length = 500

 Score =  321 bits (823), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 169/367 (46%), Gaps = 29/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+     +R Y     +IE+++ 
Sbjct: 144 LRPLPEKFHGLTDKETRYRQRYVDLMVNPEVKRNFVVRSRFIQFMRSYLDNMGYIEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   +Y++ + E   K+L+  G ++++     +RN 
Sbjct: 204 VLNTIAGGAA-ARPFITH---HNTLDIDMYMRIATELPLKRLIVGGMDRVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +  +M     I+  AA+ +       +Q    N      
Sbjct: 260 GMDPKHNPEFTTVELYQAYTDFHGMMDIAEGILSGAAQSILGTYEVEWQGEKLNLAPGWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIE 224
            +T+ +A   YA +D G         D       A+  G+ +A   D TW +       +
Sbjct: 320 RLTMVDAVKEYAGVDFGAI------TDDAEAVAAAKAIGVELAETADKTWGNALYACFDQ 373

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           K+E    +   T +  YP   S L    P DPR T+RFEL+ C+ EL NA  EL DPI+Q
Sbjct: 374 KVEEQ--LIQPTFITMYPVEVSPLTKRSPQDPRLTERFELFVCHSELANAYSELNDPIDQ 431

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RFEK+++ +++   ET  +DEDFL  L   MP + G+ MG DR VM++T A+ I +VI
Sbjct: 432 RSRFEKQLELRERGDEETEMLDEDFLTALEYGMPPTGGMGMGIDRCVMMLTNADTIRDVI 491

Query: 344 WTPFSQS 350
             P  + 
Sbjct: 492 LFPTMKP 498


>gi|121595553|ref|YP_987449.1| lysyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120607633|gb|ABM43373.1| lysyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 515

 Score =  321 bits (823), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 87/368 (23%), Positives = 157/368 (42%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+    S+R + +E+ F+E+++ 
Sbjct: 158 LRPMPDKFHGVADQEVKYRQRYVDLMTDEAARRRFVARSKAVGSIRSFMMEHGFLEVETP 217

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 218 MLHPIPGGA-NAKPFVTH---HNALEQEMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 273

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y  LM     ++R  A +       ++     +     +
Sbjct: 274 GISVRHNPEFTMMEFYAAYWNYRDLMDFTEALVRDAALKATGTLQLTYGGRAVDLAQPFQ 333

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  ++               D   L    ++ G+    D   +   + + +   
Sbjct: 334 RLTIREAIYQHTE-------AGAHVDDAAWLISALKKLGMTEEKDRLSTRTLASLQVLYF 386

Query: 227 EPNLGI--NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E  +       T +  +P   S LA      P  T+RFELY    E  N   EL D  +Q
Sbjct: 387 EEEVEDKLWQPTFIMEHPTEISPLARANDLRPEVTERFELYITGREFGNGFSELNDAEDQ 446

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  ++  K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 447 AARFHAQVAAKDAGDDEAMFFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVI 506

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 507 LFPALRRE 514


>gi|323143524|ref|ZP_08078204.1| lysine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416718|gb|EFY07372.1| lysine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 508

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 91/372 (24%), Positives = 156/372 (41%), Gaps = 31/372 (8%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D   R              R     R  I S +R Y   ++F+E+++ 
Sbjct: 148 LRPLPEKYKGLTDQEARCRQRYLDLIANEESRRTFEIRTKIVSFIRSYMDSHRFMEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG   + + F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 208 MMHVIPGGA-NAKPFITH---HNALDIDMYLRIAPELFLKRLVVGGFERVYEINRNFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN------CNP 161
                H PEFTM+E+Y A+  Y  L+    ++ R  A                     + 
Sbjct: 264 GIDVRHNPEFTMMEFYMAYHDYHDLIDFTEDLFRKMALEVLGDTKVHYGKEGEEGLDIDF 323

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
               + +T+ E+  +Y N      +   D  D        ++  I +          + +
Sbjct: 324 AKPFDRLTMKESIVKYGN-----GITMEDLDDAEKTKELCKKLHIEIMPSWEHGHFIAAL 378

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E +E +  +   T +  YPA  S LA    +DPR+T RFE +    E+ N   EL DP
Sbjct: 379 FDELVEEH--LQQPTFITSYPAEISPLARRSDSDPRYTDRFEFFIGGREMGNGFSELNDP 436

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +Q  RF ++ + KK   +E    DED++  L   +P ++G  +G DR VML T  + I 
Sbjct: 437 DDQASRFHQQAEAKKHGDDEAMYYDEDYIVALQHGLPPTAGEGIGIDRTVMLFTNCHTIR 496

Query: 341 EVIWTPFSQSNQ 352
           +VI  P  + N+
Sbjct: 497 DVILFPTLRPNK 508


>gi|292557973|gb|ADE30974.1| Lysyl-tRNA synthetase, class-2 [Streptococcus suis GZ1]
          Length = 500

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 150/366 (40%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETRYRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     II+  A+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADYQDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIAIHEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            I + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RIHMVDAIKEQTGVDFWQEMS------FEEAKALAAEHKVPVEKHHTEVGQIINSFFEEY 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEAT--LIQPTFVYGHPVAVSPLAKKNDEDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   +D D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 ERFEAQAKAKELGDDEATGVDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQS 350
            P  + 
Sbjct: 492 FPTMKP 497


>gi|184154700|ref|YP_001843040.1| lysyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|260663748|ref|ZP_05864636.1| lysyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|238692942|sp|B2GA78|SYK_LACF3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|183226044|dbj|BAG26560.1| lysyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|260551799|gb|EEX24915.1| lysyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|299782822|gb|ADJ40820.1| Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Lactobacillus
           fermentum CECT 5716]
          Length = 497

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 160/367 (43%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  I  ++R Y  +N F+E+++ 
Sbjct: 143 LRPLPDKYHGLQDPELVYRQRYLDLITNRESFERFQTRTKIIKAVRRYMDDNGFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L+         R F T     + +   +Y++ + E   K+L+  G E+++     +RN 
Sbjct: 203 ILENIASGA-EARPFVTH---HNALNIDMYMRIATELRLKRLIVGGMERVYELGRIFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEF  +E Y A+  +  +MK+   I + AA V       ++Q    +  +  +
Sbjct: 259 GMDPYHNPEFDTMETYAAYFDFNDVMKETEGIFKAAAGVVADDLKITYQGTELDFSTSFK 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      ID    +              A   GI+         I +    EK+
Sbjct: 319 RLHMVDAIKEATGIDFWQEMTV------EEARKLADDNGIKYESWWKVGHIINAFFEEKV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +    +     +  +P   S LA I   D RFT RFELY    E  NA  EL DPI+QR 
Sbjct: 373 QDT--LEQPIFIYGHPVEVSPLAKINEEDSRFTDRFELYILGKEYANAFSELNDPIDQRK 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + QE  +  +E  PIDEDF+  L   MP + G+ +G DR+VML+T A +I +V+  
Sbjct: 431 RFEAQAQENAEGNDEAQPIDEDFVEALEYGMPPTGGLGVGIDRMVMLMTDAKSIRDVLLF 490

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 491 PTMRPKK 497


>gi|257468138|ref|ZP_05632234.1| lysyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062423|ref|ZP_07926908.1| lysyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688099|gb|EFS24934.1| lysyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 493

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 156/367 (42%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR  I   +R       F+E+++ 
Sbjct: 137 IRPLPEKFHGLTDVETRYRKRYVDLIMNKEVRDTFIKRTQIIKGIRSILDNKGFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   LY++ +PE   K+L+  G EK++     +RN 
Sbjct: 197 LMHPILGGAA-AKPFVTH---HNALNVDLYMRIAPELYLKRLIVGGLEKVYELGRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E Y+A+  +  +M     II   A+          N         + 
Sbjct: 253 GMSTRHNPEFTMIELYQAYADFNDMMDLAEEIITTLAKEVLGTTTVEYNGKTLVLENFKR 312

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKI 226
           I + +       +D                   A+Q  + VA        + ++   EK 
Sbjct: 313 IHMVDFVKEVTGVDFWDQNM-----TFEEAKALAKQHHVEVADHMNSVGHVVNQFFEEKC 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DP +QR 
Sbjct: 368 EEK--IVQPTFVFGHPVEISPLAKRNEEDPRFTDRFELFIDAREYANAFSELQDPADQRG 425

Query: 287 RFEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           RFE +++E ++  +E  P ID+DF+  L   +P + G+ +G DRL+ML+T +++I +V+ 
Sbjct: 426 RFEDQVEEAERGNDEATPVIDDDFVEALEYGLPPTGGMGIGIDRLIMLLTQSDSIRDVLL 485

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 486 FPQMKPR 492


>gi|91789471|ref|YP_550423.1| lysyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91698696|gb|ABE45525.1| lysyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 516

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 160/368 (43%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   S LRE+ V + F+E+++ 
Sbjct: 159 LRPLPDKFHGMADQEVKYRQRYVDLIMDESARKRFMARSKAVSGLREFMVAHDFLEVETP 218

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + R F T     + + + ++L+ +PE   K+L+  G E++F    ++RN 
Sbjct: 219 MLHPIPGGA-NARPFKTH---HNALDQEMFLRIAPELYLKRLIVGGFERVFEINRSYRNE 274

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A  +Y  LM     +IR AA+        S+     +     E
Sbjct: 275 GISVRHNPEFTMMEFYAAWWNYSDLMTFTEALIRDAAQKVTGSLQLSYGGKAVDLSQPFE 334

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  ++               D   L    ++ G   A D   +   + + +   
Sbjct: 335 RLTIREAILKHTE-------AGEHVDDMVWLTNALKKLGATEAKDRLSTRSLASLQVLYF 387

Query: 227 EPNLG--INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E  +   +   T +  +P   S LA    A P  T+RFELY    E  N   EL D  EQ
Sbjct: 388 EETVEEKLWQPTFIMEHPTEISPLARANDARPEVTERFELYITGREFGNGFSELNDAEEQ 447

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  ++  K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 448 AARFNAQVAAKDDGDDEAMFYDHDFIRALEYGMPPTGGCGVGIDRLMMLLTDSPSIRDVI 507

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 508 LFPALRRE 515


>gi|227522413|ref|ZP_03952462.1| lysyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227090471|gb|EEI25783.1| lysyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 501

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 167/366 (45%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               KR+ I +++R Y   + ++E+++ 
Sbjct: 142 LRPLPDKWHGLQDKEQKYRQRYLDLISNQDSFDRFHKRSHIITAIRNYLDSHDYLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   LYL+ + E   K+L+  G E+++     +RN 
Sbjct: 202 VLHNQAGGA-NARPFITH---HNALNIDLYLRIALELHLKRLIVGGMERVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  +  +M +   I + AA+      + ++Q    +     +
Sbjct: 258 GMDTRHNPEFTMLESYVAYYDFHDVMDETEGIFKAAAKTVTDDGMITYQGHRIDLDKPFK 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +A   Y  ID    +D+ D            +  I          I +    E +
Sbjct: 318 RQHMVDAIKEYTGIDFWKPMDDDDAKKLAD------EHHIHYEPWWKTGHIINAFFEELV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P   +   T +  +P   S LA     DPRFT RFE Y    E  NA  EL DPI+QR 
Sbjct: 372 QPK--LEQPTFIYGHPVEISPLAKKNAEDPRFTDRFEFYILTNEFANAFTELNDPIDQRQ 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++E+++  +E   IDED++  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 430 RFEAQVKERQEGNDEAEGIDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLF 489

Query: 346 PFSQSN 351
           P  +  
Sbjct: 490 PTMRPE 495


>gi|217077587|ref|YP_002335305.1| lysyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|226736755|sp|B7ID87|SYK_THEAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|217037442|gb|ACJ75964.1| lysyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 502

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 90/373 (24%), Positives = 160/373 (42%), Gaps = 33/373 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R  I   +RE+     FIE+++ 
Sbjct: 137 LRPMPEKWHGIKDKEVLYRQRYVDMIANDETLNRFRIRFEIIKLIREFLNSKGFIEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L+Y  G  +  R F T L   +     +Y++ + E   K+ +  G EK++     +RN 
Sbjct: 197 ILEYVTGGAS-ARPFITHL---NVFDIDMYMRIATELYLKRFIVGGFEKVYELGKNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  YE +M     +     E         +Q++  +      
Sbjct: 253 GLSYKHHPEFTSIEIYQAYADYEDMMNLTEELFVFIVEKLFGTTKVKYQDIEIDFSRPWR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +    +  +D+              +    +Q  + V   D    +  ++    +
Sbjct: 313 RVKMRDFIKEHLGVDILEDT-------EEKMLEVLKQHDVEVEIKD-KGHLIEKLWD-LV 363

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +P   S LA  +  DPR T+RFEL     E+ NA  EL DP++Q  
Sbjct: 364 EDK--VVQPTFLLEHPVEISPLAKKHREDPRVTERFELIIYGREMANAFSELNDPVDQYE 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ + ++    E   +D+DF+  L   MP + G+ +G DRLVML+T +  I +VI  
Sbjct: 422 RFLRQAKLREAGDEEAQMMDKDFVRALEYGMPPTGGLGIGIDRLVMLLTNSPTIRDVIAF 481

Query: 346 PFSQS---NQEEI 355
           P  +     +EE+
Sbjct: 482 PLVRPISFEEEEM 494


>gi|72392387|ref|XP_846994.1| lysyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62359357|gb|AAX79796.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70803024|gb|AAZ12928.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 584

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 84/375 (22%), Positives = 154/375 (41%), Gaps = 33/375 (8%)

Query: 2   HQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P + +        +R+R              + R+ I S +R +F +  F+E+++  
Sbjct: 197 HMLPDEHYGLSSVEQRFRQRYLDLIVNRENAKTFILRSKIISYIRSFFDQKDFLEVETPM 256

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L    G     R F T     + + + +YL+ +PE   KKL+  G ++++     +RN  
Sbjct: 257 LNQIAGGAA-ARPFITH---HNELNQTMYLRIAPELYLKKLVVGGLDRVYEIGKQFRNEG 312

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV----------- 157
               H PEFT +E Y A+  Y   M+    ++               +            
Sbjct: 313 IDLTHNPEFTSVESYWAYADYNDWMETTEELLYGMVMHLYGSPIVKYSPRDSEGRQLPEV 372

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             N     + + +         +       + +     L     ++  +      T + +
Sbjct: 373 TFNFNRPFKRLHIVPKLEEILGLKFPADFYSSEANSFFL--DICKKNQVECNPPFTTTRL 430

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              ++   +EP       T L  +P   S LA  +  D R ++RFEL+    E+CN+  E
Sbjct: 431 LDALVSHYLEPQCHD--PTFLCDHPRIMSPLAKWHRKDLRLSERFELFINKKEICNSYTE 488

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L  P+ QR  FE+++++++K  +E   IDE ++  L   +P + G  +G DRLVM +T  
Sbjct: 489 LNSPLVQREEFERQLRDREKGDDEAMDIDEGYVQALEYALPPTGGWGLGIDRLVMYLTSQ 548

Query: 337 NNINEVIWTPFSQSN 351
           NNI EV+  P  +  
Sbjct: 549 NNIKEVLLFPAMKPE 563


>gi|187478019|ref|YP_786043.1| lysyl-tRNA synthetase [Bordetella avium 197N]
 gi|115422605|emb|CAJ49130.1| lysyl-tRNA synthetase [Bordetella avium 197N]
          Length = 504

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 151/368 (41%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+     +R+  +   F+E+++ 
Sbjct: 145 LRPLPDKFHGVSDQELRYRQRYVDLIMTDSTRRTFEARSKAIGGIRQAMLAADFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 205 MLHPIPGGAA-AKPFVTH---HNALDMEMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y  +M    ++IR AA       + ++Q    +      
Sbjct: 261 GVSPRHNPEFTMMEFYAAYAEYRWIMDFTESLIRQAAITATGSAVLTYQERELDLSKPFA 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  ++A          P   D   L  + ++ G  V            + +   
Sbjct: 321 RLTICEAILKHA-----PHYSQPQLDDADFLRAELKKFGADVNGPVLARAGVGALQLALF 375

Query: 227 EPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E               YP   S LA         T+RFEL+    E+ N   EL DP +Q
Sbjct: 376 EETAESKLWEPTFIVDYPVEVSPLARASDTREGITERFELFITGREIANGFSELNDPEDQ 435

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF+ +++ K     E    D D++  L   MP + G  +G DRLVML+T + +I +VI
Sbjct: 436 AARFQAQVEAKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVI 495

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 496 LFPHLRRE 503


>gi|296090191|emb|CBI40010.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 82/365 (22%), Positives = 153/365 (41%), Gaps = 28/365 (7%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R  I S +R +     F+E+++  +    G   
Sbjct: 306 LKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMMNMIAGGAA 365

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LY++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 366 -ARPFVTH---HNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 421

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A   Y  +M+    ++    +          +        +  +       I 
Sbjct: 422 TTCEFYMAFADYNDVMELTEKMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPFRRID 481

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E   + A++ +   L + +      L     +  I+     T + +  +++   +E  
Sbjct: 482 MIEDLEKMADLSIPKDLSSDEAN--KYLVDACLKFDIKCPPPQTTARLLDKLVGHFLEET 539

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 T +  +P   S LA  + +    T+RFEL+    ELCNA  EL DP+ QR RF 
Sbjct: 540 CV--NPTFITNHPEIMSPLAKWHRSKQSLTERFELFVNKHELCNAYTELNDPVVQRQRFA 597

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +++++++   +E   +DE F   L   +P + G  +G DRL M++T + NI EV+  P  
Sbjct: 598 EQLKDRQSGDDEAMALDETFCMALEYGLPPTGGWGLGIDRLTMMLTDSQNIKEVLLFPAM 657

Query: 349 QSNQE 353
           +   E
Sbjct: 658 KPQDE 662


>gi|222111774|ref|YP_002554038.1| lysyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|221731218|gb|ACM34038.1| lysyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 515

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 87/368 (23%), Positives = 156/368 (42%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+    S+R + +E+ F+E+++ 
Sbjct: 158 LRPMPDKFHGVADQEVKYRQRYVDLMTDEAARRRFVARSKAVGSIRSFMMEHGFLEVETP 217

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + ++L+ +PE   K+L+  G E++F     +RN 
Sbjct: 218 MLHPIPGGA-NAKPFVTH---HNALEQEMFLRIAPELYLKRLIVGGFERVFEINRNFRNE 273

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y  LM     ++R  A +       ++     +     +
Sbjct: 274 GISVRHNPEFTMMEFYAAYWNYRDLMDFTEALVRDAALKATGTLQLTYGGRAVDLAQPFQ 333

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  ++               D   L    ++ G+    D       + + +   
Sbjct: 334 RLTIREAIYQHTE-------AGAHVDDAAWLISALKKLGMTEEKDRLSIRTLASLQVLYF 386

Query: 227 EPNLGI--NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E  +       T +  +P   S LA      P  T+RFELY    E  N   EL D  +Q
Sbjct: 387 EEEVEDKLWQPTFIMEHPTEISPLARANDLRPEVTERFELYITGREFGNGFSELNDAEDQ 446

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  ++  K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 447 AARFHAQVAAKDAGDDEAMFFDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVI 506

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 507 LFPALRRE 514


>gi|255322433|ref|ZP_05363578.1| lysyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300341|gb|EET79613.1| lysyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 501

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 161/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R++I S++R +F +  F+E+++ 
Sbjct: 141 ISPLPEKFHGLTDIETRYRQRYLDMIMNPEVRADFKRRSVIVSTIRRFFEDKGFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG   + + F T     + +    +L+ +PE   K+L+  G + ++     +RN 
Sbjct: 201 MMHPIPGGA-NAKPFVT---FHNALGVERFLRIAPELYLKRLIVGGFDAVYEMNRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPE 166
                H PEFT +E+Y A  +Y  LM     +     +  +  KI  F  +  +     +
Sbjct: 257 GMDLTHNPEFTSIEFYWAWHTYHDLMGLTEELFNVLLDKLDMPKIIEFDGMQIDFSKPFK 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I+  +A      +D           D+  +  + +  G           + + +    +
Sbjct: 317 RISYKKALVEIGGLDEAIIG------DKDKILAKLKADGFEANAKLDLGHLQAELFDNYV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+    ADP   +RFEL+    EL N  +EL DPI+Q  
Sbjct: 371 ESK--LTDPTFIIDYPISISPLSRRSDADPNIAERFELFIAGRELANGFNELNDPIDQYG 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++ K    +E + +DED++  L   MP ++G  +G DRLVML+T   +I +V+  
Sbjct: 429 RFASQIEAKNAGDDEAHEMDEDYVRALGYAMPPTAGQGIGIDRLVMLLTNKKSIRDVVLF 488

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 489 PAMRPQKNE 497


>gi|304383221|ref|ZP_07365694.1| lysine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335692|gb|EFM01949.1| lysine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 576

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 89/356 (25%), Positives = 146/356 (41%), Gaps = 26/356 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +  YR+R              LKR  +  ++R       + E+++  LQ   G  +  
Sbjct: 160 DPELRYRQRYVDLVVNEGVKETFLKRAAVLRTMRSVLDSAGYTEVETPILQSIAGGAS-A 218

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F T     + +   +Y++ + E   K+L+  G E ++     +RN      H PEFT 
Sbjct: 219 RPFITHF---NALNTEMYMRIATELYLKRLIVGGFEGVYEIGKNFRNEGMDRTHNPEFTC 275

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           +E Y  ++ Y  +M     ++       N            +  +    + + +A     
Sbjct: 276 MELYVQYKDYNWMMAFTEQLLEKICMEVNGCTETVVDGKTISFKAPYRRLPILDAIKEKT 335

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             DL    +         +    ++ G+          +   I  E  E        T +
Sbjct: 336 GFDLNGMSETE-------IRDVCRKLGMETDETMGKGKLIDEIFGEFCEGT--FIQPTFI 386

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP   S L  ++ + P  T+RFEL     EL NA  EL DPI+Q  RF ++M+   K 
Sbjct: 387 IDYPVEMSPLTKMHRSKPGLTERFELMVNGKELTNAYSELNDPIDQEQRFIEQMKLADKG 446

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            +E   ID DFL  L   MP +SGI +G DRLVML+TG   I EV++ P  +  ++
Sbjct: 447 DDEAMVIDRDFLRALQYGMPPTSGIGIGIDRLVMLMTGQTAIQEVLFFPQMRPEKK 502


>gi|154334456|ref|XP_001563475.1| lysyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134060496|emb|CAM42043.1| putative lysyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 587

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 90/377 (23%), Positives = 153/377 (40%), Gaps = 32/377 (8%)

Query: 2   HQIPSQPWWNR--DFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P   +     +  +R+R              ++R  I   +R++F E  F+E+++  
Sbjct: 198 HMLPDDYFGLSSFEQRFRQRYLDLIVNRDNIKVFIQRANIIKYIRKFFDERDFVEVETPV 257

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L    G     R F T     + + + ++L+ +PE   K+L+  G ++++     +RN  
Sbjct: 258 LNQIAGGAA-ARPFVTH---HNDLNQTMFLRIAPELYLKELVVGGMDRVYELGKQFRNES 313

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN---------- 158
               H PEFT  E Y A+  Y   M    +++   A   +                    
Sbjct: 314 IDLTHNPEFTSCEAYWAYMDYNDWMTATEDLLYGLAMELHGSPIVRYAPKDSEGKLLPEV 373

Query: 159 -CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             N     + + +     +   I     +D         L    ++         T   +
Sbjct: 374 TFNFNKPFKRLHIIPELEKRLKISFDN-VDFESDAGIQFLMDLCKKHKADCPPPYTAPRL 432

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              ++ E +EP         +  +P   S LA  +  DPR T+RFEL+    EL NA  E
Sbjct: 433 LDALIAEFLEPECHD--PCFICDHPRVMSPLAKWHRNDPRLTERFELFVNKKELANAYTE 490

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGA 336
           L +PI QR  F K+M  + K  +E+  IDE F+A L   +P + G  +G DRLVM +T  
Sbjct: 491 LNNPIVQREEFVKQMLNRDKGDDESMKIDEGFIAALEHALPPTGGWGLGIDRLVMFLTSQ 550

Query: 337 NNINEVIWTPFSQSNQE 353
           +NI EV+  P  +   +
Sbjct: 551 SNIKEVLLFPAMKPEGK 567


>gi|19074136|ref|NP_584742.1| LYSYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74621262|sp|Q8SS56|SYKC_ENCCU RecName: Full=Probable lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|19068778|emb|CAD25246.1| LYSYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 440

 Score =  320 bits (821), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 159/375 (42%), Gaps = 31/375 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  IP++ +   + +  YR+R               KR  I   +R +     F+E+++ 
Sbjct: 73  LRTIPTEHFGLKDPETIYRKRYMDLLINRESRNRFQKRAQIIGYIRSFLDSRGFLEVETP 132

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + ++  LY++ SPE   KKL+  G E+++     +RN 
Sbjct: 133 MMNLIPGGAA-AKPFITH---HNELKLDLYMRVSPELYLKKLVVGGLERVYEIGKQFRNE 188

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------- 157
                H PEFT  E+Y A+  Y  LM+    +I    E          +           
Sbjct: 189 GIDLTHNPEFTSCEFYMAYADYNDLMEMTEELISGMVENMFGTDTIVYSPKKREERTESV 248

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +       I++ E       +DL     + ++    LL     + G+ V    T S +
Sbjct: 249 ELSFKRPFRVISILEELNARLGLDLSGETLDREETLEKLLSA-CDKEGLSVEKPRTLSRV 307

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             +++   IEP       T +  +P   S LA  + +    T+RFEL+    E+CNA  E
Sbjct: 308 LDKLIGHVIEPQCV--NPTFVKDHPIAMSPLAKNHRSKAGLTERFELFINCKEICNAYTE 365

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L +P EQR RF ++ Q+     +E    DEDF   L   +P + G  +G DRLVM +T A
Sbjct: 366 LNNPFEQRERFLQQTQDLNAGDDEAMMNDEDFCTALEYGLPPTGGWGIGIDRLVMYLTDA 425

Query: 337 NNINEVIWTPFSQSN 351
            NI +VI+ P  +  
Sbjct: 426 ANIRDVIFFPTMKPE 440


>gi|149241914|ref|XP_001526379.1| lysyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146450502|gb|EDK44758.1| lysyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 597

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 79/373 (21%), Positives = 151/373 (40%), Gaps = 29/373 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P++ +  +D    YR+R                R+ I   +R++  +  F+E+++ 
Sbjct: 216 LHMLPTEHYGFKDQEARYRKRYLDLIMNDRSRDIFKVRSQIIKYIRKFLDDRDFVEVETP 275

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  + F T     + +   ++++ +PE   K+L+  G  +++     +RN 
Sbjct: 276 ILNVIAGGAT-AKPFVTH---HNDLNMEMFMRIAPELFLKELVVGGMNRVYEIGRQFRNE 331

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y+A+     LM     +     +          + +         
Sbjct: 332 GIDMTHNPEFTTCEFYQAYADVYDLMDTTEMMFSEMVKEITGGYVVKYHPDGPQGKELTL 391

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I + E       +          +     L    +   +  +   T + +  
Sbjct: 392 DFSRPWKRINMMEGLEEAYKVKFPPGDQLHTEETAEFLKKVLKDNNLECSPPLTNARMLD 451

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL 
Sbjct: 452 KLVG---ELEDASINPTFIFGHPQMMSPLAKRDREIPGLCERFEVFVATKEICNAYTELN 508

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE++ ++K +  +E   +DE F   L   +P ++G   G DRL M +T +N 
Sbjct: 509 DPFDQRARFEEQARQKAQGDDEAQLVDETFCNALEYGLPPTAGWGCGIDRLAMFLTDSNT 568

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 569 IREVLLFPTLKPD 581


>gi|190345427|gb|EDK37310.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 587

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 154/376 (40%), Gaps = 29/376 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P++ +  +D    YR+R                R+ I   +R++     FIE+++ 
Sbjct: 217 LHMLPTEHFGFKDQEARYRKRYLDLIMNDSVRDRFKVRSKIIGFIRDFLDSRDFIEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++++ +PE   K+L+  G ++++     +RN 
Sbjct: 277 MMNVIAGGAT-AKPFITH---HNDLNMDMFMRVAPELFLKELVVGGMDRVYEIGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y+A+     LM     +     +          +        +  
Sbjct: 333 GIDMTHNPEFTTCEFYQAYADVYDLMDMTEVLFSEMVKKITGDYKITYHPEGLEGKAMTL 392

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I + E   +  N+          +     L        +      T + +  
Sbjct: 393 DFSRPWKRINMIEELEKVYNVKFPPGDQLHTEETGAFLKQILIDNKLECTPPLTNARMLD 452

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ +           T +  +P   S LA      P   +RFE++    E+CNA  EL 
Sbjct: 453 KLVGDL---EDSCINPTFIFGHPQMMSPLAKKDRKIPGLCERFEVFVATKEICNAYTELN 509

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE++ ++K +  +E   +DE F   L   +P ++G   G DRL M +T +N 
Sbjct: 510 DPFDQRQRFEEQAKQKAQGDDEAQLVDETFCNALEYGLPPTAGWGCGIDRLAMFLTDSNT 569

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  + +QE+
Sbjct: 570 IREVLLFPTLKPDQEK 585


>gi|78777471|ref|YP_393786.1| lysyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78498011|gb|ABB44551.1| Lysyl-tRNA synthetase, class-2 [Sulfurimonas denitrificans DSM
           1251]
          Length = 504

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 86/372 (23%), Positives = 167/372 (44%), Gaps = 30/372 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S  R +F +  F+E+++ 
Sbjct: 142 ISPLPEKFHGITDKETRYRKRYLDLIMNADVRKTFKVRSKVISLTRRFFEDKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G   + + F T     + +    YL+ +PE   K+L+  G E +F     +RN 
Sbjct: 202 MMHPIAGGA-NAKPFVTH---HNALGIDRYLRIAPELYLKRLIVGGFEAVFEINRNFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+++Y+ L++      R   +  N             F++   
Sbjct: 258 GMDATHNPEFTSIEFYWAYKTYKDLIEITKEYFRYLFDHLNLPTSLPYGDMEVDFNKFSE 317

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + E+      +            D+  + L  ++  I+V ++ +   +   +  E +E
Sbjct: 318 VPLIESLYTIGAV------PKEIVNDKDKIILFLKEKNIQVKNNLSLGQLQGELFDEFVE 371

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA     +P  T+RFEL+    E+ NA  EL DP++Q +R
Sbjct: 372 DK--LINPTFITEYPVEISPLARRSDKNPEVTERFELFIAGREIANAFSELNDPVDQYNR 429

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+ +++ K+   +E + +D DF+  L   M  ++G  +G DRLVML+T  ++I +V+  P
Sbjct: 430 FKTQVESKESGDDEAHAMDLDFVEALSYGMAPTAGQGIGIDRLVMLLTNEHSIRDVLLFP 489

Query: 347 FSQS----NQEE 354
             +      ++E
Sbjct: 490 AMKPIHTDEKQE 501


>gi|218296573|ref|ZP_03497301.1| lysyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243115|gb|EED09647.1| lysyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 492

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 161/365 (44%), Gaps = 29/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +     +++  YR+R               +R+ +   +R +F +  F+E+++ 
Sbjct: 132 LHPLPDKWHGLKDKEVRYRQRYLDLIVNPEVREVFRRRSEMVRYIRRFFEDRGFLEVETP 191

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + +    +L+ S E   K+LL  G EK+F     +RN 
Sbjct: 192 ILQATTGGA-EARPFKT---YHNALDHEFFLRISLELYLKRLLVGGYEKVFEIGRVFRNE 247

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ +      ++      +       +Q    N      
Sbjct: 248 GIDHNHNPEFTMLEAYWAYADYQDMALLVEELLSGLVLHLFGTYEVPYQGRILNFKPPFR 307

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I+  EA    A +         D  D   L L A      +A   ++  +  ++    +
Sbjct: 308 RISFVEALKEKAGLPF-------DPLDLERLRLWADAHHPELAQVPSY-KLLDKLFGLYV 359

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  +P   S LA  +   P  T+R++L+A  +EL  A  EL DP++QR 
Sbjct: 360 EPE--LQDPTFVFDFPLAISPLAKRHREKPGLTERWDLFAGGMELAPAYSELNDPLDQRE 417

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ + +K+   E    DEDFL  L   MP ++G+ +G DRL ML+T   ++ +V+  
Sbjct: 418 RFLEQARRRKEGDEEAPEPDEDFLLALEYGMPPAAGLGLGIDRLAMLLTDQASLRDVLLF 477

Query: 346 PFSQS 350
           P  + 
Sbjct: 478 PLMKP 482


>gi|332295595|ref|YP_004437518.1| Lysyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178698|gb|AEE14387.1| Lysyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 500

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 158/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +  +  YR            R   +KR+ I S +R++F E  F+E+++ 
Sbjct: 147 LRALPEKWHGLKNVELRYRFRYLDLISNPKTRDIFVKRSKIISFIRKFFEERGFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  +  + F T     + + K L+L+ +PE   K+LL     KIF    ++RN 
Sbjct: 207 MLHIIPGGAS-AKPFVT---YHNVLEKNLFLRIAPELYLKRLLIGNFHKIFEINRSFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y+A+     +M     ++      V       +Q    +      
Sbjct: 263 GVSVKHNPEFTMLEAYQAYSDLNDMMSLAEELLFYLCQNVLGTTDIVYQGKTYSFKPPLR 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +   E+   Y  +            D+  L    +  G + + +     +   I    +
Sbjct: 323 RLDFDESIKEYVGL------TEDQLKDKAFLQSFVKNLGCQFSEEWGLGKLKLEIFEHIV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  YPA  S LA   P +P    RFEL     E+ NA  EL DPI Q++
Sbjct: 377 EKK--IEEPTFVVGYPAEVSPLAKKDPLNPEKAHRFELIVAGREIGNAHSELNDPIYQKN 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            F ++ + K+    E   +DEDF+  L   MP + G+ +G DR+VML+T + +I +VI+ 
Sbjct: 435 MFLEQAKLKESGDEEAQSMDEDFIFALEHGMPPAGGLGLGIDRIVMLLTDSPSIRDVIFF 494

Query: 346 PFSQS 350
           P  + 
Sbjct: 495 PHLKP 499


>gi|146419551|ref|XP_001485737.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 587

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 154/376 (40%), Gaps = 29/376 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P++ +  +D    YR+R                R+ I   +R++     FIE+++ 
Sbjct: 217 LHMLPTEHFGFKDQEARYRKRYLDLIMNDSVRDRFKVRSKIIGFIRDFLDSRDFIEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++++ +PE   K+L+  G ++++     +RN 
Sbjct: 277 MMNVIAGGAT-AKPFITH---HNDLNMDMFMRVAPELFLKELVVGGMDRVYEIGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y+A+     LM     +     +          +        +  
Sbjct: 333 GIDMTHNPEFTTCEFYQAYADVYDLMDMTEVLFSEMVKKITGDYKITYHPEGLEGKAMTL 392

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I + E   +  N+          +     L        +      T + +  
Sbjct: 393 DFSRPWKRINMIEELEKVYNVKFPPGDQLHTEETGAFLKQILIDNKLECTPPLTNARMLD 452

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ +           T +  +P   S LA      P   +RFE++    E+CNA  EL 
Sbjct: 453 KLVGDL---EDSCINPTFIFGHPQMMSPLAKKDRKIPGLCERFEVFVATKEICNAYTELN 509

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE++ ++K +  +E   +DE F   L   +P ++G   G DRL M +T +N 
Sbjct: 510 DPFDQRQRFEEQAKQKAQGDDEAQLVDETFCNALEYGLPPTAGWGCGIDRLAMFLTDSNT 569

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  + +QE+
Sbjct: 570 IREVLLFPTLKPDQEK 585


>gi|322828174|gb|EFZ32092.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 580

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 89/375 (23%), Positives = 155/375 (41%), Gaps = 33/375 (8%)

Query: 2   HQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P   +     +  +R+R              + R+ +   +R +F +  F+E+++  
Sbjct: 193 HMLPDGWYGLSSIEQRFRQRYLDFIVNRENIQTFVTRSKVIRYIRNFFEDLDFLEVETPV 252

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L    G     R F T     + + + +YL+ +PE   K+L+  G ++++     +RN  
Sbjct: 253 LNQIAGGAA-ARPFITH---HNELNQRMYLRIAPELYLKELVVGGMDRVYELGKQFRNEG 308

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN---------- 158
               H PEFT +E Y A+  Y   M+   ++    A   +   F                
Sbjct: 309 IDLTHNPEFTSVEAYWAYADYNDWMRTTEDLFYGLAMHIHGTPFVKYAPKDSEGNQLPEV 368

Query: 159 -CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             N     + + +     +  N+   T  +         L     +  +      T + +
Sbjct: 369 VFNFNKPFKRLYIIPELEKRMNVKFPT--EFESDSSNAFLRELCSKHEVECIPPLTTARL 426

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              ++   +EP       T +  +P   S LA  +  DP+ T+RFEL+    ELCNA  E
Sbjct: 427 LDALISHYLEPEC--QDPTFVCDHPRVMSPLAKWHRDDPQLTERFELFLNKKELCNAYTE 484

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGA 336
           L +PI QR  F K+++ K+K  +E   IDE F+  L   +P + G  +G DRLVM +T  
Sbjct: 485 LNNPIVQREEFMKQLRNKEKGDDEAMDIDEGFVQALEHALPPTGGWGLGIDRLVMFLTSQ 544

Query: 337 NNINEVIWTPFSQSN 351
            NI EV+  P  +  
Sbjct: 545 ANIKEVLLFPAMKPE 559


>gi|207092494|ref|ZP_03240281.1| lysyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 374

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 166/366 (45%), Gaps = 26/366 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               KR++I SS+R++F    F+E+++  +
Sbjct: 14  PLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMM 73

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 74  HPIPGGA-NARPFIT---YHNALEVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGM 129

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM+E+Y A+ +YE L++    +     +  N       N     F++   I+
Sbjct: 130 DHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVIS 189

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I  G             L     + G++V  + T+  + +      +E  
Sbjct: 190 YLDALETIGGISRGI------LEKEDRLLAYLLEQGVKVEPNLTYGKLLAEAFDHFVEHK 243

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T + +YP   S LA    ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 244 --LINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 301

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +VI  P  
Sbjct: 302 NQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAM 361

Query: 349 QSNQEE 354
           +  + +
Sbjct: 362 RPVKND 367


>gi|313665724|ref|YP_004047595.1| lysine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949826|gb|ADR24422.1| lysine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 500

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 161/368 (43%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR                R  I  +++ +     ++E+++ 
Sbjct: 145 LRPLPDKHAGIQDIEEKYRRRYVDLIMNHDVRKTFQARTKIIRTMQNFLDNRGYMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  + F T     + +   +YL+ + E   K+L+  G E ++     +RN 
Sbjct: 205 ILHSLKGGAS-AKPFVTHY---NVLNTDVYLRIATELHLKRLIVGGFEGVYEIGRIFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+E    LM     I R      N   +  + NV  +     +
Sbjct: 261 GMSTRHNPEFTSIELYVAYEDMFFLMDLTEEIFRVCNSAVNSSSVIEYNNVKIDLSKPFK 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
            + + +   +   +D    +              A++  + V  H ++   I +    E 
Sbjct: 321 RLHMVDGIKQVTGVDFWQEMTV------EQALELAKKHNVYVEKHQESVGHIINLFYEEF 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    I   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 375 VEST--IIEPTFVYGHPKEISPLAKSNPNDPRFTDRFELFIIGREYANAFSELNDPIDQY 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++E+ K  +E   +D DF+  L   MP ++GI +G DRLVML+T +++I +V+ 
Sbjct: 433 ERFKAQLEEESKGNDEANDMDIDFVEALEHAMPPTAGIGIGIDRLVMLLTNSDSIKDVLL 492

Query: 345 TPFSQSNQ 352
            P  +  +
Sbjct: 493 FPQMKPKE 500


>gi|42560629|ref|NP_975080.1| lysyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|81400864|sp|Q6MUG2|SYK_MYCMS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|42492125|emb|CAE76722.1| Lysine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301321327|gb|ADK69970.1| lysine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 500

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 161/368 (43%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR                R  I  +L+ +     ++E+++ 
Sbjct: 145 LRPLPDKHAGIQDIEEKYRRRYVDLIVNHDVRKTFQARTKIIRTLQNFLDNKGYMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  + F T     + +   +YL+ + E   K+L+  G E ++     +RN 
Sbjct: 205 ILHSLKGGAS-AKPFITHY---NVLNTDVYLRIATELHLKRLIVGGFEGVYEIGRIFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+E    LM     I R      N   I  + NV  +     +
Sbjct: 261 GMSTRHNPEFTSIELYVAYEDMFFLMNLTEEIFRVCNAAVNSNSIIEYNNVKIDLSKPFK 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
            + + +   +   +D    +              A++  + V  H ++   I +    E 
Sbjct: 321 RLHMVDGIKQVTGVDFWKEMTV------QQALELAKKHKVHVEKHQESVGHIINLFYEEF 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    I   T +  +P   S LA   P+DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 375 VEST--IVEPTFVYGHPKEISPLAKSNPSDPRFTDRFELFILGREYANAFSELNDPIDQY 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++E+ K  +E   +D DF+  L   MP ++GI +G DRLVML+T + +I +V+ 
Sbjct: 433 ERFKAQIEEESKGNDEANDMDIDFIEALEHAMPPTAGIGIGIDRLVMLLTNSESIKDVLL 492

Query: 345 TPFSQSNQ 352
            P  +  +
Sbjct: 493 FPQMKPRE 500


>gi|237736851|ref|ZP_04567332.1| lysyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229420713|gb|EEO35760.1| lysyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 493

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 156/367 (42%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR  I S++R       F+E+++ 
Sbjct: 137 IRSLPEKFHGLTDVETRYRKRYVDLIMNKDVRDTFVKRTKIISAIRRILDGKGFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LYL+ +PE   K+L+  G EK++     +RN 
Sbjct: 197 LMHPILGGAA-ARPFITH---HNTLDIDLYLRIAPELYLKRLIIGGMEKVYELGRNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E Y+A+  Y  +M     II   A+          N         + 
Sbjct: 253 GMSTRHNPEFTMIEMYQAYADYTDMMDLAEEIISTLAKDVLGTSTITYNGKEIVLENFKR 312

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEKI 226
           I + +       +D                   A++  + V         I ++   EK 
Sbjct: 313 IHMVDLIKEVTGVDFWNK-----DITFEEAKALAKEHHVEVPEHMNTVGHIINQFFEEKC 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S L+     D RFT RFEL+    E  NA  EL DP +QR 
Sbjct: 368 EET--IVQPTFVYGHPVEISPLSKRNEEDSRFTDRFELFIDAREYANAFSELQDPADQRG 425

Query: 287 RFEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           RFE +++E ++  +E  P ID+DF+  L   +P + G+ +G DRL+ML+T + +I +V++
Sbjct: 426 RFEAQVEEAERGNDEATPVIDDDFVEALEYGLPPTGGMGIGIDRLIMLLTNSESIRDVLY 485

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 486 FPQMKPR 492


>gi|328770381|gb|EGF80423.1| hypothetical protein BATDEDRAFT_19596 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 577

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 82/375 (21%), Positives = 148/375 (39%), Gaps = 30/375 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P+  +  +D    YR R             ++ R+ I + LR +     F+E+++ 
Sbjct: 198 LRMLPTSHYGFKDQEMRYRMRYLDLIMNQHVRDKMITRSKIINYLRRFLDSKGFLEVETP 257

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K+L+  G ++++     +RN 
Sbjct: 258 MMNMIAGGAT-AKPFVTH---HNDLNMDLFMRIAPELFLKQLIVGGLDRVYEIGRQFRNE 313

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN----------V 157
                H PEFT  E+Y A+     LM      +    +          +           
Sbjct: 314 GIDLTHNPEFTTCEFYMAYADVHDLMSMTEAFLSGLVKTLTGGYKIKYHPQGIADGAPEW 373

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +       +++ +   R          D         L     +  +  +   T + +
Sbjct: 374 EIDFTPPFRRVSMIDELERVLECVFPAAADLATPEATKFLSDLCIKHNVDCSSPRTSARL 433

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             +++ E IE        T +  +P   S LA  +   P   +RFE +    E+CNA  E
Sbjct: 434 LDKLVGEFIENQC--INPTYITDHPQMCSPLAKAHRNRPGLCERFECFVATKEICNAYTE 491

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DP +QR RFE++  +K    +E   +DE F   L   +P + G  +G DRL M +T +
Sbjct: 492 LNDPFDQRARFEQQAADKAAGDDEAQLVDETFCNALEYGLPPTGGWGLGLDRLTMFLTDS 551

Query: 337 NNINEVIWTPFSQSN 351
           NNI EV+  P  +  
Sbjct: 552 NNIKEVLPFPAMKPE 566


>gi|297625163|ref|YP_003706597.1| lysyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297166343|gb|ADI16054.1| lysyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 494

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 158/366 (43%), Gaps = 24/366 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   S +R Y  +  F+E+++ 
Sbjct: 138 LRPLPDKFHGLADKEVRYRQRHLDLLVSPEVKRAFVLRSRAVSFIRRYLDDLGFLEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     R F+T     + +    +L+ S E   K+L+  G + ++     +RN 
Sbjct: 198 VLQSVPGGA-EARPFTTH---HNALSHDFHLRISLELYLKRLIIGGFDAVYEIGRNFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PE+TMLE Y A   YE ++    ++  R    +       +Q V  +      
Sbjct: 254 GLSPKHNPEYTMLELYWAGRDYEDILALVEDMYSRLVETLTGSTKLVYQGVTLDFTPPWP 313

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +       + A +D        +   R  +             D   +++++++    +
Sbjct: 314 RVDYTGELKKRAGMDFDPL---DEAKLRDWVRAHHPPKEGPALADRPLNEVYNKLYDLYL 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   I   T +  +P   S LA  +   P   +RFE     +EL NA  EL DP+EQR 
Sbjct: 371 EP--CIEQPTFVMDHPLAISPLAKAHRTRPGLVERFEPVCMGMELGNAFSELNDPLEQRA 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + ++    E +P+DE+FLA L   MP + G+ +G DRL ML+  A +I +VI  
Sbjct: 429 RFEAQQRLREAGDEEAHPLDEEFLAALEVGMPPTGGLGLGIDRLAMLLADAPSIRDVILF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PLLKPE 494


>gi|255030315|ref|ZP_05302266.1| lysyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 484

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 95/353 (26%), Positives = 156/353 (44%), Gaps = 27/353 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   LYL+ + E   K+L+  G +K++     +RN 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+E YE +M     ++     +V      ++     +      
Sbjct: 260 GTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A   Y  +D      + +          A++  + V    T+  I +      +
Sbjct: 320 RIHMADAVKEYVGVDFWNVTSDEE------ARELAKKHDVPVTEHMTYGHILNEFFETYV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 374 EEK--LIQPTFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           RFE +M+E+++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +
Sbjct: 432 RFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPS 484


>gi|242033765|ref|XP_002464277.1| hypothetical protein SORBIDRAFT_01g015530 [Sorghum bicolor]
 gi|241918131|gb|EER91275.1| hypothetical protein SORBIDRAFT_01g015530 [Sorghum bicolor]
          Length = 613

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 83/364 (22%), Positives = 160/364 (43%), Gaps = 28/364 (7%)

Query: 9   WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R+ + S +R++  E +F+E+++  +    G   
Sbjct: 258 LRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDEREFLEVETPMMNMIAGGAA 317

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   L+++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 318 -ARPFVTH---HNELNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 373

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A+  Y  LM+    ++    +          +        +  +       I 
Sbjct: 374 TTCEFYMAYADYNDLMELTETMLSGMVKELTGGYKIKYHANGVMNPPIEIDFTPPFRRID 433

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + +     AN+++   L + +      L     +  ++     T S +  +++   +E  
Sbjct: 434 MIKDLEVVANLNIPKDLSSDEAN--RYLIEACAKYDVKCPPPQTTSRLLDKLVGHFLEEM 491

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL DP+ QR RFE
Sbjct: 492 CV--NPTFIINHPEIMSPLAKWHRSRPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFE 549

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +++++++   +E   +DE F   L   +P + G  +G DRL ML+T + NI EV+  P  
Sbjct: 550 EQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAM 609

Query: 349 QSNQ 352
           +  +
Sbjct: 610 KPQE 613


>gi|108757457|ref|YP_632893.1| lysyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108461337|gb|ABF86522.1| lysyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 517

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 161/365 (44%), Gaps = 21/365 (5%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              L+RN +   +R +     F+E+++ 
Sbjct: 156 LRPLPEKWHGLTDVEVRYRQRYLDLVSNPDVKQTFLRRNKLIRFIRNFLDTRDFVEVETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +          R F+T     + +   LY++ +PE   K+L+  G E+++     +RN 
Sbjct: 216 MMHPLVSGAA-ARPFTTH---HNALDIDLYMRIAPELYLKRLVVGGLERVYEVNRNFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+ +YE LM     +I  AA+         + +   +     +
Sbjct: 272 GISTRHNPEFTMLEFYQAYATYEDLMDLSEEMISEAAKAVTGDTKVKYGDHVLDFGKGWK 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ EA     +      + + D+    LL     +A  R        ++   +    +
Sbjct: 332 RISMTEAIREVVSGLSDKDMADADRLRHELLKTSHSEAERRAIDTMNHGELVGALFEHHV 391

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P  T RFELY    E+ NA  EL DP++Q+ 
Sbjct: 392 EHT--LIHPTFITHFPTAVSPLARRNDQNPDVTDRFELYVAGREIANAFSELNDPLDQKG 449

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  K++   ET   DED++  L   MP ++G  +G DRL ML T + +I +VI  
Sbjct: 450 RFQAQLDAKQRGQQETMDYDEDYIRALEHGMPPTAGEGIGIDRLAMLFTDSQSIRDVILF 509

Query: 346 PFSQS 350
           P  + 
Sbjct: 510 PLLKP 514


>gi|269118661|ref|YP_003306838.1| lysyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268612539|gb|ACZ06907.1| lysyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 494

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 88/372 (23%), Positives = 160/372 (43%), Gaps = 29/372 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R  I   +R +     F+E+++ 
Sbjct: 135 IRPLPEKFHGLTDVETRYRQRYVDLVMNNDVKETFITRFKILRFIRNFLENKGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + + F T     + +    +L+ +PE   K+LL  G EK+F    ++RN 
Sbjct: 195 MLHPIAGGA-NAKPFITH---HNALDMDFFLRIAPELYLKRLLVGGFEKVFEINRSFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y+A+  +E +M     ++    E        ++Q+   +     +
Sbjct: 251 GTSIKHNPEFTMLELYQAYADFEDIMNLTEELVSSLVEELFGTTKLTYQDTEIDFTRPWK 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD--IFSRILIE 224
            I + +A       DL +   + +  +        +   I +  D  ++   + + +  E
Sbjct: 311 RIKMKDAVKDATGFDLDSINSDEEALN------LVKSMNIPLEKDKAYTKYGLLNLLFEE 364

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           K+E    +   T +  YP   S L+        F  RFE++    E  NA  EL DP+EQ
Sbjct: 365 KVEAT--LMNPTFITEYPKEISPLSKNKKDSVDFVDRFEMFIYGREHANAFSELNDPVEQ 422

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           + RF+ + + K+   +E +  D D++  L   MP + G+ +G DRL ML+T + +I +V+
Sbjct: 423 KERFDAQEKMKEAGDDEAHETDLDYIRALEYGMPPAGGLGIGIDRLTMLLTDSFSIRDVL 482

Query: 344 WTPFSQSNQEEI 355
             P  +    E+
Sbjct: 483 LFPALKKEDFEL 494


>gi|315222516|ref|ZP_07864405.1| lysyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188202|gb|EFU21928.1| lysyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 505

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 154/364 (42%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 154 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSRIVSEIRRYLDNQGFLEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 214 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEMGRIFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +E +M     II+ AA+     +   +Q        +  
Sbjct: 270 GMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEIFIGRKFA 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA      ID    +   +          A++  + V    T   I +    + +
Sbjct: 330 RKHMLEAIKEQTGIDFWKDMTLEEAT------ALAKEHHVTVEKHFTVGHIINAFFEDFV 383

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 384 EDT--LIQPTFIYGHPVEVSPLAKKNADDPRFTDRFELFIVGREFANAFTELNDPIDQLA 441

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL+ML+T   +I +V+  
Sbjct: 442 RFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLIMLLTDVTSIRDVLLF 501

Query: 346 PFSQ 349
           P  +
Sbjct: 502 PTMK 505


>gi|297569276|ref|YP_003690620.1| lysyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925191|gb|ADH86001.1| lysyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 492

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 163/369 (44%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR  I   +R++     F+E+++ 
Sbjct: 136 LRPLPEKFHGLTDIETRYRQRYVDLMVNPEVRDTFRKRVEIIRLIRDFLSNRGFMEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G  T  + F T     + +   LYL+ +PE   K+LL  G E++F     +RN 
Sbjct: 196 MMQAIAGGAT-AKPFKTH---HNALGLDLYLRIAPELYLKRLLVGGLERVFEINRNFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+ +YE+LM+    +I      V      S+Q    +      
Sbjct: 252 GLSTRHNPEFTMLEFYQAYATYEELMELTEEMISWVTMEVCGSMQISYQGQAVDLAPPWR 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ EA  +   +            D   L   A + GI +        + + +    +
Sbjct: 312 RYTMDEALQQIGGLSP------ELLTDFTALKALAHRHGIVLQPQAGIGKVKTELFECLV 365

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E  L     T +  YP   S LA     DP  T RFEL+    E+ NA  EL DP +QR 
Sbjct: 366 EEKLVD--PTFITAYPTEVSPLARKNEDDPEITDRFELFITGREVANAFSELNDPDDQRR 423

Query: 287 RFEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           R  K+++E+     E +P +DED+L  L   MP ++G  +G DRL ML+T + +I +VI 
Sbjct: 424 RLIKQIEER-GEDEEIFPVLDEDYLRALEYGMPPAAGEGIGIDRLTMLLTDSPSIRDVIL 482

Query: 345 TPFSQSNQE 353
            P  +  ++
Sbjct: 483 FPHLRPEKQ 491


>gi|237739093|ref|ZP_04569574.1| lysyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423693|gb|EEO38740.1| lysyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 493

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 28/366 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R              +KR  I  ++++Y  +  F+E+++  
Sbjct: 139 RSLPEKYHGLTDVEIRYRKRYVDLIMNPEVRDTFIKRTQIIKAVKKYLDDRGFLEVETPL 198

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     + F T     + +   L+L+ +PE   KKL+  G E+++     +RN  
Sbjct: 199 MHPILGGAA-AKPFVTH---HNALNLDLFLRIAPELYLKKLIVGGFERVYELGRNFRNEG 254

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y++H ++  +M  C  II    +  N       +         + +
Sbjct: 255 ISTRHNPEFTMIELYQSHANFHDMMDLCEGIISSVCQEVNGTTDIEYDGVQLSLKNFQRV 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIE 227
            + +       +D    +              A++  + VA        + +    +K E
Sbjct: 315 HMVDMIKDVTGVDFWQEMT------FEEAKKLAKEHHVEVADHMDSVGHVINEFFEQKCE 368

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P FT RFEL+    E  NA  EL DP +QR R
Sbjct: 369 ER--VVQPTFVYGHPVEISPLAKRNEKNPNFTDRFELFINKREYANAFTELNDPADQRGR 426

Query: 288 FEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE +++E  +   E  P IDE F+  L   +P + G+ +G DRLVML+TGA +I +VI  
Sbjct: 427 FEAQVEEALRGNEEATPEIDESFVEALEYGLPPTGGMGIGIDRLVMLLTGAPSIRDVILF 486

Query: 346 PFSQSN 351
           P  +  
Sbjct: 487 PQMKPR 492


>gi|94500762|ref|ZP_01307291.1| lysyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94427084|gb|EAT12065.1| lysyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 513

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 100/379 (26%), Positives = 162/379 (42%), Gaps = 35/379 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I  ++R+Y  +  F+E+++ 
Sbjct: 141 LRPLPDKFHGLADQEIKYRQRYVDLIINQETRDLFMVRSKIIEAMRKYLSDRNFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  + F T     + +   +YL+ +PE   K+LL  G E++F     +RN 
Sbjct: 201 MLQAIPGGAT-AKPFETH---HNALGIDMYLRIAPELYLKRLLVGGFERVFEINRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------- 158
                H PEFTM+E+Y+A+ +Y  LM    +++R  A+                      
Sbjct: 257 GLSTRHNPEFTMIEFYQAYATYHDLMDTTEDMLRNIAQDVLGTTDIVSTEKDAEGNVVNE 316

Query: 159 --CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD---DT 213
              +       +T+ EA  +Y N D    + N  + +   L    +Q GIR         
Sbjct: 317 TVYDFAKPFARLTMMEAVLKY-NPDFDEAVINDPENNLDKLIAYGRQVGIREDAKQSAWG 375

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
                  I  E  E    ++  T +  YP   S LA     +P  T RFE +    EL N
Sbjct: 376 AGKWLCEIFEETAEHK--LDQPTFITAYPWEVSPLARRNDENPFITDRFEFFVGGRELAN 433

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              EL D  +Q  RF K+++EK    +E    D D++  L   MP ++G  +G DRLVML
Sbjct: 434 GFSELNDAEDQAERFRKQVEEKDAGDDEAMHYDADYVQALEYGMPPAAGEGIGIDRLVML 493

Query: 333 VTGANNINEVIWTPFSQSN 351
            T +  I +VI  P  +  
Sbjct: 494 FTDSPTIKDVILFPHMRPR 512


>gi|154148211|ref|YP_001407169.1| lysyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166229802|sp|A7I3S8|SYK_CAMHC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|153804220|gb|ABS51227.1| lysyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 499

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 85/365 (23%), Positives = 158/365 (43%), Gaps = 27/365 (7%)

Query: 4   IPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R               KR++I  ++R +F +  F+E+++  + 
Sbjct: 142 LPEKFHGLADKELRYRQRYLDMIMDPSVRVDFEKRSLIVRTIRRFFEDRGFLEVETPMMH 201

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G   + + F T     + +    YL+ +PE   K+L+  G   +F     +RN    
Sbjct: 202 QIAGGA-NAKPFITH---HNALDIDRYLKIAPELYLKRLVVGGMNSVFEMNRCFRNEGMD 257

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYIT 169
             H PEFT +E+Y A  +Y + M     +     +  N  +I  + N+  +   + + I 
Sbjct: 258 LTHNPEFTSIEFYWAWHNYFEAMDLTEELFNELLKTLNLGEILDYGNLKIDFSKKFQRIK 317

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A      I            D+  +  + +  G           + + +    +E  
Sbjct: 318 YLDALVLIGEISP------EIIKDKDEILKKLKSDGFEANEKLDLGHLQAELFDNYVESK 371

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  +P   S L+     DP   +RFELY    EL NA +EL DP++Q  RF+
Sbjct: 372 --LINPTFITDFPVSISPLSRRSDKDPEIAERFELYIAGKELANAFNELNDPLDQYERFK 429

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +++ KK   +E + +DED++  L   MP + G  +G DRLVM++    +I +VI  P  
Sbjct: 430 AQIEAKKAGDDEAHEMDEDYVRALSYAMPPTVGWGLGVDRLVMILLNKASIRDVILFPAM 489

Query: 349 QSNQE 353
           +  + 
Sbjct: 490 KPIKN 494


>gi|224613430|gb|ACN60294.1| Lysyl-tRNA synthetase [Salmo salar]
          Length = 569

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 85/376 (22%), Positives = 157/376 (41%), Gaps = 28/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R  I + LR +  E  F+EI++ 
Sbjct: 190 LHMLPHLHFGLKDKETRFRQRYLDLILNDYVRQKFVTRAKIITYLRSFLDELGFLEIETP 249

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 250 MMNLIPGGAV-AKPFVT---YHNDLDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 305

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM     ++    +          +           
Sbjct: 306 GIDLTHNPEFTTCEFYMAYADYHDLMDITEKLLSGMVKHITGGYKVKYHPEGPEGPTYEI 365

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       +++     +   +             R        Q G+      T + +  
Sbjct: 366 DFTPPFRRVSMTHDLEKEMGVKFPAADTYDSDETRKFFDELCAQKGVECPPPRTTARLLD 425

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ + +E        T +  +P   S LA  + ++   T+RFEL+    E+CNA  EL 
Sbjct: 426 KLVGDFLEVTC--INPTFICDHPQIMSPLAKWHRSEKGLTERFELFVLKKEICNAYTELN 483

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI QR  FE++ + K +  +E+  +DE F   L   +P ++G  MG DRL M +T +NN
Sbjct: 484 DPIRQRELFEQQAKAKAEGDDESMSVDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNN 543

Query: 339 INEVIWTPFSQSNQEE 354
           I EV++ P  + +  +
Sbjct: 544 IKEVLFFPAMKPDDNK 559


>gi|260591365|ref|ZP_05856823.1| lysine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536731|gb|EEX19348.1| lysine--tRNA ligase [Prevotella veroralis F0319]
          Length = 577

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 94/374 (25%), Positives = 152/374 (40%), Gaps = 35/374 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR  +  ++R++F E  
Sbjct: 141 LKPLPIVKYKDGEAYDKFEDPEQRYRQRYVDLVVNDGVKDTFLKRATVLRTMRQFFDEAG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ  PG  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 201 YTEVETPTLQSIPGGAS-ARPFITHF---NALNIDMYMRIATELYLKRLIVGGFEGVYEI 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     ++       N K          
Sbjct: 257 GKNFRNEGMDRFHNPEFTCMELYVQYKDYNWMMSFTEQLLEKICVAVNGKPEVQMGDKVI 316

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIF 218
            F      + + EA       D         + +  +  +   +  +  +        + 
Sbjct: 317 SFKAPFRRLPILEAIKEKTGFD------LEGKSEDEIRDIALNKLKMETIDESFGKGKLI 370

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL
Sbjct: 371 DEIFGEFCEGTY--IQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSEL 428

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q  RF  +M    K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG  
Sbjct: 429 NDPIDQEERFLDQMHLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKE 488

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  +  
Sbjct: 489 YIQEVMLFPQMKPE 502


>gi|58271550|ref|XP_572931.1| lysine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134115106|ref|XP_773851.1| hypothetical protein CNBH3030 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256479|gb|EAL19204.1| hypothetical protein CNBH3030 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229190|gb|AAW45624.1| lysine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 630

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 159/374 (42%), Gaps = 31/374 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +     + +  YR+R              + R+ + + +R+Y     F+E+++ 
Sbjct: 240 LHLLPGRE-GVVDLETRYRKRYLDLIMNPSTRDIFVTRSKVINYIRKYLDAQGFLEVETP 298

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+++ +PE   K+L+  G +++F     +RN 
Sbjct: 299 MMSMIAGGAT-AKPFVTH---HNDLKLDLFMRIAPELYLKELVVGGLDRVFEIGRVFRNE 354

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ----------KIFSFQNV 157
           +    H PEF++ E+Y A+     +M     +I    +              K    +  
Sbjct: 355 QIDMTHNPEFSICEFYMAYADMYDIMDMTEELIEGMVKSLTGGTKLTFHPQGKGEGKKVY 414

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +     +   +     +  N+         D      L    ++  +  A   T S +
Sbjct: 415 EVDFARPWKRFDMIGELEKQLNVKFPPGETLHDDNTNKFLRELCEKHNVDCAEPKTNSRL 474

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             +++ E IE        + +  +P   S LA    + P   +RFE + C  E+CNA  E
Sbjct: 475 LDKLVGEYIENQCV--NPSFIVGHPQVMSPLAKYDRSRPGLCERFEAFLCTKEICNAYTE 532

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DP +QR RF +++++K++   E   +DE FL  L   +P + G  +G DRLVM +T  
Sbjct: 533 LNDPFDQRERFMEQVRQKEQGDEEAQGVDETFLDALEYGLPPTGGWGLGIDRLVMFLTDC 592

Query: 337 NNINEVIWTPFSQS 350
           +NI EV+  P  + 
Sbjct: 593 SNIKEVLLFPAMRP 606


>gi|308234248|ref|ZP_07664985.1| lysyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943530|ref|ZP_08240995.1| lysine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491499|gb|EGF23273.1| lysine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 518

 Score =  319 bits (818), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 83/369 (22%), Positives = 148/369 (40%), Gaps = 31/369 (8%)

Query: 2   HQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     +R+  YR+R               KR+ I S +R +     ++E+++  
Sbjct: 148 RPLPEKFHGLSDREIRYRQRYVDLIMNPEVRDVFRKRSHIISLIRRFMENQGYLEVETPM 207

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G   + R F+T     + +    YL+ + E   K+L+  G +++F     +RN  
Sbjct: 208 MHQILGGA-NARPFTTHF---NALDCDFYLRIATELPLKRLIVGGMDRVFEIGRQFRNEG 263

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-----NQKIFSFQNVNCNPFS 163
               H PEFT +E Y A+ + + + +    + +  A+         +I ++Q+   N   
Sbjct: 264 MDLTHNPEFTSMEAYCAYSNLQGMKELTEQMFQLIAQDVCGCEKGSEIITYQDKRVNMSG 323

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               + +++  +      +              L     +  I          +   I  
Sbjct: 324 TWRSVALSDVASEVVGEKINMDTPVEH------LRALCDKHEISWEESWGAGKLLFEIYD 377

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T +  YPA  S L+     DPR T RFEL  C  E  NA  EL DP++
Sbjct: 378 ELGEQT--LQDPTFVCDYPAEVSPLSKRKDEDPRLTDRFELVICGHEYANAFSELNDPVD 435

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q  RF  +++ K    +E    D D++  L   MP + GI  G DR++ML     +I +V
Sbjct: 436 QAQRFMAQVKAKGMGDDEAMGYDYDYVRALEYGMPPTGGIGYGIDRMIMLFCDQPSIRDV 495

Query: 343 IWTPFSQSN 351
           +  P  +  
Sbjct: 496 LLFPQMKPE 504


>gi|115687312|ref|XP_793463.2| PREDICTED: similar to Lysyl-tRNA synthetase, partial
           [Strongylocentrotus purpuratus]
 gi|115930119|ref|XP_001180301.1| PREDICTED: similar to Lysyl-tRNA synthetase, partial
           [Strongylocentrotus purpuratus]
          Length = 584

 Score =  319 bits (818), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 85/373 (22%), Positives = 158/373 (42%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   N++  +R+R              + R+ I S LR +F E  F+E+++ 
Sbjct: 197 LHMLPHLHYGVTNKETRFRQRYLDLIMNDYVRDKFITRSKIVSYLRRFFDELGFLEVETP 256

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 257 MMNMIAGGAT-AKPFITH---HNDLNMDLFMRVAPELYLKMLVVGGLQRVYEIGRQFRNE 312

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT LE+Y A+  Y  LM     ++    +          +        +  
Sbjct: 313 GIDLTHNPEFTTLEFYMAYADYNDLMDIAERLLSGMVKFVTGSTKVTYHPDGPEGEPMEI 372

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       +++     +   +      +         L    ++  +      T + +  
Sbjct: 373 DFTPPFRRVSMINELQKVLKVQFPPLENFGSDETNKFLDDLCRKHEVECTSPRTTARLLD 432

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S L+  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 433 KLVGEYIETQC--ISPTFIMDHPEIMSPLSKWHRSIPGLTERFELFVARKEICNAYTELN 490

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RF  + ++     +E   IDE+F   L   +P + G  +G DRL M +T +NN
Sbjct: 491 DPMVQRERFATQAKDHAAGDDEAQLIDENFCTALEYGLPPTGGFGLGIDRLAMFLTDSNN 550

Query: 339 INEVIWTPFSQSN 351
           I EV++ P  + +
Sbjct: 551 IKEVLFFPAMKPD 563


>gi|171780089|ref|ZP_02920993.1| hypothetical protein STRINF_01877 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281437|gb|EDT46872.1| hypothetical protein STRINF_01877 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 496

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 151/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISGIRRYLDGLGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G EK++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFVTH---HNAQDMDMVLRIALELHLKRLIVGGMEKVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  ++ +M     II+ A+   N     ++Q          +
Sbjct: 260 GMDATHNPEFTMIELYEAYADFKDIMDITEGIIQNASAAVNGNGPITYQGTEIAIDQPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            I + +A      +D    +              A++  + V    T    I +    E 
Sbjct: 320 RIHMVDAIKEVTGVDFWKEMT------LEEAQELAKEKNVPVEKHFTSVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVEVSPLAKKNAEDTRFTDRFELFIMTKEYGNAYSELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   +D D++  L   MP + G+ +G DRLVML+T    I + + 
Sbjct: 432 SRFEAQAKAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDALL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|221132051|ref|XP_002158421.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 568

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 86/379 (22%), Positives = 162/379 (42%), Gaps = 32/379 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R                R+ I + +R+Y  +  F+EI++ 
Sbjct: 192 LHMLPHLHFGLKDKETRFRQRYLDIILNEQVRQKFYTRSRIINYVRKYLDQLGFLEIETP 251

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +   L+L+ +PE   K L+  G ++++     +RN 
Sbjct: 252 MMNMIPGGAT-AKPFITH---HNDLNMDLFLRVAPELYHKMLVVGGIDRVYEIGRQFRNE 307

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN----------- 156
                H PEFT  E+Y A+  Y  +++    ++    +          +           
Sbjct: 308 GIDMTHNPEFTTCEFYMAYADYNDVIEITEKMLSGMVKSLFGTYKLKYHPERTDEAEGEE 367

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              +       I++     +  N+       N ++  R        + G+  +   T S 
Sbjct: 368 WEIDFTPPFRRISMLAELQKVLNVTFPNFDLNTEEA-RKYFDDLCIKNGVECSPPRTVSR 426

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +  +++ + +E +      T +  +P   S LA  + + P  T+RFEL+ C  E+CNA  
Sbjct: 427 LLDKLVGDYLEVHC--INPTFIMDHPQIMSPLAKWHRSQPGLTERFELFVCRKEICNAYT 484

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL DP  QR  F  + ++K    +E+   DE F   L   +P ++G  MG DRL M  T 
Sbjct: 485 ELNDPYIQRQMFTNQAKDKAAGDDESMFYDEGFCTALEYGLPPTAGWGMGIDRLCMFFTD 544

Query: 336 ANNINEVIWTPFSQSNQEE 354
           +NNI EV++ P  + +  +
Sbjct: 545 SNNIKEVLFFPAMKPDDNK 563


>gi|281425305|ref|ZP_06256218.1| hypothetical protein HMPREF0971_02277 [Prevotella oris F0302]
 gi|299141503|ref|ZP_07034639.1| lysine--tRNA ligase [Prevotella oris C735]
 gi|281400598|gb|EFB31429.1| lysine--tRNA ligase [Prevotella oris F0302]
 gi|298576839|gb|EFI48709.1| lysine--tRNA ligase [Prevotella oris C735]
          Length = 579

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 92/376 (24%), Positives = 153/376 (40%), Gaps = 34/376 (9%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +   R+R              LKR  I  ++R +F E+ 
Sbjct: 142 LKPLPIVKYKDGVAYDKFDDPELRARQRYVDLIVNDGVKETFLKRATILRTMRNFFDEHG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPTLQSIAGGAS-ARPFITHF---NALNIDMYMRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA--NQKIFSFQNVN 158
              +RN      H PEFT +E Y  ++ Y  +M     ++    +               
Sbjct: 258 GKNFRNEGMDKFHNPEFTCMELYVQYKDYNWMMSFTEQLLETICKAVNNGSTEVKNGENT 317

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    + + EA       DL       +   R +  +  +  GI          + 
Sbjct: 318 VSFKAPYRRLPILEAIKEKTGFDLAGKN---EDEIRTIATVDLKMEGIDETFGK--GKLI 372

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL
Sbjct: 373 DEIFGEFCEGT--FIQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSEL 430

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q  RF+++M+   K  +E   ID+DFL  L   M  +SGI +G DRL ML+TG  
Sbjct: 431 NDPIDQEERFKEQMKLADKGDDEAMIIDQDFLRALQYGMAPTSGIGIGIDRLCMLMTGKE 490

Query: 338 NINEVIWTPFSQSNQE 353
            I EV+  P  +   +
Sbjct: 491 FIQEVLLFPQMKPEAK 506


>gi|157866772|ref|XP_001681941.1| lysyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68125392|emb|CAJ03251.1| putative lysyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 586

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 88/377 (23%), Positives = 154/377 (40%), Gaps = 32/377 (8%)

Query: 2   HQIPSQPWWNR--DFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P   +     +  +R+R              ++R  I   +R++F E  F+E+++  
Sbjct: 198 HMLPDDYFGLSSFEQRFRQRYLDFIVNRDNIKTFIQRANIIKYIRKFFDERDFVEVETPV 257

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L    G     R F T     + + + ++L+ +PE   K+L+  G ++++     +RN  
Sbjct: 258 LNQIAGGAA-ARPFVTH---HNDLNQTMFLRIAPELYLKELVVGGMDRVYEIGKQFRNEG 313

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN---------- 158
               H PEFT  E Y A+  Y   M    +++   A   +                    
Sbjct: 314 IDLTHNPEFTSCEAYWAYMDYHDWMTATEDLLYGLAVELHGSPIVRYAPKDSEGKPLPEA 373

Query: 159 -CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             N     + + +     +   +     +D         L    ++         T   +
Sbjct: 374 TFNFSKPFKRLHIIPELEKRLKVSFDN-VDFESDAGIQFLMDLCKKHKADCPPPYTAPRL 432

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              ++ E +EP         +  +P   S LA  +  DPR T+RFEL+    EL NA  E
Sbjct: 433 LDALIAEFLEPECHD--PCFICDHPRVMSPLAKWHRNDPRLTERFELFVNKKELANAYTE 490

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGA 336
           L +PI QR  F K+++ + K  +E+  IDE F+A L   +P + G  +G DRLVM +T  
Sbjct: 491 LNNPIVQREEFLKQVRNRDKGDDESMEIDEGFVAALEHALPPTGGWGLGIDRLVMFLTSQ 550

Query: 337 NNINEVIWTPFSQSNQE 353
           +NI EV+  P  +   +
Sbjct: 551 SNIKEVLLFPAMKPEGK 567


>gi|326531520|dbj|BAJ97764.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 605

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 85/376 (22%), Positives = 157/376 (41%), Gaps = 30/376 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQ+P   +   +++  +R+R              + +  I   LR +     F+E+++ 
Sbjct: 198 LHQMPHMHYGLKDKETRFRQRYLDLMMNDWVKQKFVTKTRIIKYLRNFLDNMGFLEVETP 257

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 258 LMNMIPGGAT-AKPFVT---YHNDLDMNLFMRIAPELYLKMLVVGGIDRVYEIGRNFRNE 313

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN----------V 157
                H PEFTM E+Y A+  Y  L++     +               +           
Sbjct: 314 GIDLTHNPEFTMCEFYMAYADYNDLIEITERFLSGLVMHLFGSYKIKYHPEGPEHPEVEW 373

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +     +  ++     R   + L +      +  R        +  +  +   T S +
Sbjct: 374 EIDFTPPFKRFSMIHDLERECGVKLPSPTTYHTEEARKFFDDLCVKFAVDCSPPRTTSRL 433

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             +++   +E        T +  +P   S LA  + ++P  T+RFEL+    ELCN+  E
Sbjct: 434 LDKLVGHFLETKCC--NPTFICDHPQIMSPLAKYHRSEPGLTERFELFVGYRELCNSYTE 491

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DP+ QR RFE + ++K+    E  P+DE+F   L   +P + G   G DRL M +T +
Sbjct: 492 LNDPLVQRERFESQAKDKEAGDEEAQPVDENFCTALEYGLPPTGGWGCGIDRLTMFLTDS 551

Query: 337 NNINEVIWTPFSQSNQ 352
           NNI EV+  P  +  +
Sbjct: 552 NNIKEVLLFPAMKPVK 567


>gi|282859169|ref|ZP_06268291.1| lysine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587988|gb|EFB93171.1| lysine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 575

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 96/374 (25%), Positives = 153/374 (40%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR  +  ++R +F E  
Sbjct: 141 LKPLPVVKQKDGETFDSFDDPEQRYRQRYVDLVVNDGVKDTFLKRATVLRTMRNFFDEAG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 201 YTEVETPTLQTIAGGAS-ARPFITHF---NALNNDMYMRIATELYLKRLIVGGFEGVYEI 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     ++       N K          
Sbjct: 257 GKNFRNEGMDRFHNPEFTCMELYVQYKDYNWMMSFTEQLLEKICVAVNGKPEVQMGDKVI 316

Query: 161 PFS-EPEYITVAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            F      + + +A       D  G + D       + L L+       +        + 
Sbjct: 317 SFKAPFRRLPILDAIKEKTGFDLYGKSEDEIRNIAVNELKLE------EIDESFGKGKLI 370

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL
Sbjct: 371 DEIFGEFCEGTY--IQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSEL 428

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q  RF ++M+   K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG  
Sbjct: 429 NDPIDQEERFIEQMKLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGKE 488

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  +  
Sbjct: 489 YIQEVLLFPQMKPE 502


>gi|167516606|ref|XP_001742644.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779268|gb|EDQ92882.1| predicted protein [Monosiga brevicollis MX1]
          Length = 649

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 160/373 (42%), Gaps = 28/373 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P Q +   D    +R+R              + R  I + LR +     F+E+++ 
Sbjct: 145 LRVLPHQHFGITDMETRFRQRYLDLMVNSKARENFITRAKIITYLRRFLDNMGFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 205 MMNQIAGGAT-AKPFVTH---HNDLNLDLFMRVAPELYLKMLVVGGYDRVYEIGRQFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
           +    H PEFT  E+Y A+  YE LM+    ++               +           
Sbjct: 261 QIDLTHNPEFTSCEFYMAYADYEDLMEVTEQLLAGLVLSIKGSYKIKYHPNGPDGEEHEI 320

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +  N    +      +  R  L     + G+  +   T S +  
Sbjct: 321 DFTPPFRRISMIEGLEQALNRKFPSAEQFDSEETRVFLDNLCTELGVDCSAPRTTSRLTD 380

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + + P  T+RFEL+    ELCNA  EL 
Sbjct: 381 KLVGEYLESQA--INPTFICDHPQIMSPLAKWHRSKPGMTERFELFVMTKELCNAYTELN 438

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++MQ+K    +E   IDE F+  L   +P ++G  +G DRL M +T +NN
Sbjct: 439 DPVIQRERFEQQMQDKAAGDDEAQDIDEGFIKALEHGLPPTAGWGIGLDRLAMFLTDSNN 498

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  +  
Sbjct: 499 IKEVLLFPAMRPE 511


>gi|118475508|ref|YP_892300.1| lysyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414734|gb|ABK83154.1| lysyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 504

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 156/369 (42%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR++I S++R +F +  F+E+++ 
Sbjct: 142 ISPLPEKFHGLTDIEMRYRQRYLDMIMDKDVRADFVKRSLIISTIRRFFEDKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G   + + F T     + +    YL+ +PE   K+L+  G E +F     +RN 
Sbjct: 202 MMHPIAGGA-NAKPFITH---HNALDVDRYLKIAPELYLKRLIVGGMEAVFEMNRCFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPE 166
                H PEFT +E+Y A  +Y + M     +     +  N      F   + +      
Sbjct: 258 GMDLTHNPEFTSIEFYWAWHNYFEAMDLTEELFAVLLDRLNLPQVIEFDGKSIDFSKPFA 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +   +A      I    + D     D+ L  L+A +             + + +    +
Sbjct: 318 RVKYIDAIVEIGGI----SRDIVTNKDKILSKLKADK--FEANDKLDLGHLQAELFDNYV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L+    AD    +RFEL+    EL NA +EL DP++Q  
Sbjct: 372 EDK--LINPTFIVDFPISISPLSRRSDADKNVAERFELFIAGRELANAFNELNDPVDQYE 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +++ K    +E + +DED+   L   M  + G  +G DRLVML+    +I +VI  
Sbjct: 430 RFKSQIEAKNAGDDEAHEMDEDYCQALGYGMSPTVGWGLGVDRLVMLLLNKKSIRDVILF 489

Query: 346 PFSQSNQEE 354
           P  +  + E
Sbjct: 490 PAMKPLKTE 498


>gi|302672111|ref|YP_003832071.1| lysyl-tRNA synthetase LysS [Butyrivibrio proteoclasticus B316]
 gi|302396584|gb|ADL35489.1| lysyl-tRNA synthetase LysS [Butyrivibrio proteoclasticus B316]
          Length = 523

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 99/368 (26%), Positives = 160/368 (43%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR+ I   +R +  +  F+E+++ 
Sbjct: 168 LMPLPEKFHGLTDTEIRYRQRYVDLIMNEDVKETFKKRSAILREIRNFLADRDFLEVETP 227

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G E+++     +RN 
Sbjct: 228 MLVENAGGAA-ARPFITHY---NALDEERKLRISLELYLKRLIVGGLERVYEIGRVFRNE 283

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+   ++ R  A +V    +  + +   +     E
Sbjct: 284 GVDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGTTLIKYGDNEIDLGKPFE 343

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA ID      + +          A++  I      T  DI +    E  
Sbjct: 344 RLTMNDAIKKYAGIDFDAVKTDEE------AKALAKEHHIEFEDRHTKGDIINLFFEEYC 397

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   T +  +P   S L    P DP   +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 398 EKN--LIQPTFIMDHPLAISPLTKKKPTDPEKVERFELFINTWEMCNAYSELNDPIDQRE 455

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +         E    DEDFL  L   M  + GI  G DRL ML+T +  I +V+  
Sbjct: 456 RFAAQDANAAAGDEEAEHTDEDFLNALEIGMAPTGGIGYGIDRLCMLLTDSETIRDVLLF 515

Query: 346 PFSQSNQE 353
           P  +S ++
Sbjct: 516 PTLKSVKK 523


>gi|319938836|ref|ZP_08013200.1| lysyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811886|gb|EFW08152.1| lysyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 495

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 154/364 (42%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSRIVSEIRRYLDNQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEMGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +E +M     II+ AA+     +   +Q        +  
Sbjct: 260 GMDATHNPEFTTIEAYQAYADFEDIMDLTEGIIQSAAKAVTDAESVPYQGTEIFIGRKFA 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + EA      ID    +   +          A++  + V    T   I +    + +
Sbjct: 320 RKHMLEAIKEQTGIDFWKEMTLEEAT------ALAKEHHVTVEKHFTVGHIINAFFEDFV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 374 EDT--LIQPTFIYGHPVEVSPLAKKNADDPRFTDRFELFIVGREFANAFTELNDPIDQLS 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + Q K+   +E   ID D++  L   MP + G+ +G DRL+ML+T   +I +V+  
Sbjct: 432 RFEAQAQAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLIMLLTDVTSIRDVLLF 491

Query: 346 PFSQ 349
           P  +
Sbjct: 492 PTMK 495


>gi|223040265|ref|ZP_03610543.1| lysyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878518|gb|EEF13621.1| lysyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 502

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 87/367 (23%), Positives = 161/367 (43%), Gaps = 27/367 (7%)

Query: 3   QIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R               +R++I S++R +F +  F+E+++  +
Sbjct: 143 PLPEKFHGLTDIETRYRQRYLDMIMNPEVRADFKRRSVIVSTIRRFFEDKGFLEVETPMM 202

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + + F T     + +    +L+ +PE   K+L+  G + ++     +RN   
Sbjct: 203 HPIPGGA-NAKPFVT---FHNALGVERFLRIAPELYLKRLIVGGFDAVYEMNRNFRNEGM 258

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A  +Y  LM     +     +  +  K+  F  +  +     + I
Sbjct: 259 DLTHNPEFTSIEFYWAWHTYHDLMGLTEELFNVLLDKLDMPKVIEFDGMQIDFSKPFKRI 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T  +A      +D+          D+  +  + +  G           + + +    +E 
Sbjct: 319 TYKKALVEIGGLDV------ETISDKDKILAKLKADGFEANAKLDLGRLQAELFDNYVES 372

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP   S L+    A+P   +RFEL+    EL N  +EL DPI+Q  RF
Sbjct: 373 K--LIDPTFIIDYPISISPLSRRSDANPDIAERFELFIAGRELANGFNELNDPIDQYGRF 430

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++ K    +E + +DED++  L   MP ++G  +G DRLVML+T   +I +V+  P 
Sbjct: 431 ASQIEAKDAGDDEAHEMDEDYVRALGYAMPPTAGQGIGIDRLVMLLTNKKSIRDVVLFPA 490

Query: 348 SQSNQEE 354
            +  + E
Sbjct: 491 MRPLKNE 497


>gi|322385813|ref|ZP_08059456.1| lysine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270098|gb|EFX53015.1| lysine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 496

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 155/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +   +          A++  + V    T    I +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMSFEEAA------ALAKEKKVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|50292609|ref|XP_448737.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528049|emb|CAG61700.1| unnamed protein product [Candida glabrata]
          Length = 591

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 84/380 (22%), Positives = 156/380 (41%), Gaps = 32/380 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I   +R++     FIE+++ 
Sbjct: 214 LHMLPADHFGFKDQETRYRKRYLDLIMNKDSRKRFITRSKIIKYIRKFLDNRDFIEVETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++++ +PE   K+L+  G ++++     +RN 
Sbjct: 274 MMNVIAGGAT-AKPFVTH---HNDLDMDMFMRIAPELFLKELVVGGMDRVYEIGRQFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y+A+     LM     +     +  N       +         + 
Sbjct: 330 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELLFSEMVKEINGSYVIKYHPDPNNPEKEME 389

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     + I + E   +  N+          +     L    +   +      T + + 
Sbjct: 390 LNFARPWKRINMIEELEKRFNVTFPAGDQLHTKETGEFLQKVLKDNNLECPPPITNARML 449

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 450 DKLVG---ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTEL 506

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE++ ++K +  +E   IDE F   L   +P + G   G DRL M +T +N
Sbjct: 507 NDPFDQRARFEEQARQKDQGDDEAQLIDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSN 566

Query: 338 NINEVIWTPFSQSN--QEEI 355
            I EV+  P  + +  ++E+
Sbjct: 567 TIREVLLFPTLKPDVLRDEV 586


>gi|319936968|ref|ZP_08011378.1| lysyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807904|gb|EFW04483.1| lysyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 642

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YRRR   L            R  I  S++ +     ++E+++ 
Sbjct: 141 LRPLPEKYHGLSDVEERYRRRYVDLIMNEESRKIAFARPKIIRSIQNFLDSQGYVEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F+T     + +    YL+ + E S K+L+  G + ++     +RN 
Sbjct: 201 VLNPILGGAA-ARPFTTH---HNALDMNFYLRIATELSLKRLIVGGMDAVYEIGRLFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A    E +M     II  AA  V       ++    +     +
Sbjct: 257 GMDRTHNPEFTTIEVYKAFSDLEGMMDLTEGIISNAAMSVCGTYDLEYKGNKISLAPGFK 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ +A      ID  + +              A++  I V +   +  I +    E +
Sbjct: 317 RISMTDAIKEQTGIDFASDMT------FEEAKALAEERHIEVENHFGYGHIINAFFEEYV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT+RFEL+ C  E  NA  EL DPI+Q  
Sbjct: 371 EET--IVEPTFVYGHPIEISPLAKKNLEDPRFTQRFELFICGNEYANAFTELNDPIDQYE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++EK+   +E   +D D++  L   +P + G+ MG DRLVML+TG  +I EVI  
Sbjct: 429 RFSNQLKEKELGNDEANEMDLDYVEALEYGLPPTGGMGMGIDRLVMLLTGQESIREVILF 488

Query: 346 PFSQS 350
           P  ++
Sbjct: 489 PTMKT 493


>gi|315636083|ref|ZP_07891339.1| lysine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479603|gb|EFU70280.1| lysine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 502

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 85/369 (23%), Positives = 156/369 (42%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S  R +F    F+E+++ 
Sbjct: 141 ISPLPEKFHGIQDKELRYRQRYLDLIMNSEVRKTFHIRSKVISLTRRFFENKGFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN 
Sbjct: 201 MMHPIAGGA-NAKPFVTHF---NALGVDRFLRIAPELYLKRLIVGGFEAVFEINRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+++Y+ L+           E  N             F++   
Sbjct: 257 GMDATHNPEFTSIEFYWAYKTYKDLIVLTKEYFEYLFENLNLPTILPYGEFKIDFNKFSE 316

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I + ++      +            D+  +    +   +    +     +   +  E +E
Sbjct: 317 IPLIQSLYEIGGVPQDIV------EDKDKILAFLKANNLEANANLNLGQLQGELFDEFVE 370

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA      P  T RFEL+    E+ NA  EL DPI+Q  R
Sbjct: 371 AK--LINPTFITEYPVEISPLARRNDEKPHLTDRFELFIAGKEIANAFSELNDPIDQLQR 428

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE ++  K+   +E + +DEDF+  L   M  ++G  +G DRLVM++T  ++I +V+  P
Sbjct: 429 FEGQIAAKEAGDDEAHEMDEDFVNALSYGMAPTAGQGIGIDRLVMMLTNEHSIRDVLLFP 488

Query: 347 FSQSNQEEI 355
             +  ++EI
Sbjct: 489 AMKPIKQEI 497


>gi|149193730|ref|ZP_01870828.1| lysyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135683|gb|EDM24161.1| lysyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 498

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 100/368 (27%), Positives = 167/368 (45%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +    +D    YR+R                R+ I S +RE+F++  F+E+++ 
Sbjct: 139 IHPLPEKFHGLQDVETKYRQRYLDMIMNKDTRDRFKLRSQIVSLVREFFLKKGFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   + L+ +PE   K+L+  G E +F     +RN 
Sbjct: 199 MLHTVVGGA-NARPFMTH---HNALDIDMNLRIAPELFLKRLIVGGFEAVFELNRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E+Y A+ + E LMK    +     E  N             F +   
Sbjct: 255 GIDHTHNPEFTMIEFYWAYHTMEDLMKLTKELFDFLFEKLNLPKKLEYGDMVIDFDDWRT 314

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEKI 226
           IT  +A  +  NI            D   +    + AGI +    D+   +++ +  E +
Sbjct: 315 ITYKDALIKIGNI------PEEILEDVEAMKKYLKDAGIEIEEHIDSKGKLWAELFDEFV 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA     +P F +RFEL+    E+ N  +EL DPI+Q  
Sbjct: 369 EDK--LINPTFITEFPIEISPLARRSDKNPEFAERFELFIAGREIANGFNELNDPIDQYE 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +++ K K   E   +D D++  L   MP ++G  +G DRLVML+T +++I +VI  
Sbjct: 427 RFKAQLEAKAKGDEEGMDMDYDYIKALQYGMPPTAGEGIGIDRLVMLLTNSHSIKDVILF 486

Query: 346 PFSQSNQE 353
           P  +  +E
Sbjct: 487 PTMKPKKE 494


>gi|225870836|ref|YP_002746783.1| lysyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225700240|emb|CAW94458.1| lysyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 497

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 148/366 (40%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRSSFERFITRSKMISEIRRYLDGLGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ +PE   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQDIDMVLRIAPELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M     II+ AA+    +    +Q           
Sbjct: 260 GMDATHNPEFTSIEVYEAYADYLDMMTLTEGIIQHAAKAVKGEGPIDYQGTEIKLHEPFR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      ID    +   +          A +  + V    T    I +      
Sbjct: 320 RVHMVDAIKEVTGIDFWPEMTFEEAT------ALANEKHVPVEKHFTSVGHIINAFFEAF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEDT--LIQPTFVYGHPVEVSPLAKKNPEDSRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +   K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFKAQAAAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 491

Query: 345 TPFSQS 350
            P  + 
Sbjct: 492 FPTMKP 497


>gi|146318173|ref|YP_001197885.1| lysyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146320358|ref|YP_001200069.1| lysyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751355|ref|YP_003024496.1| lysyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753256|ref|YP_003026396.1| lysyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253755149|ref|YP_003028289.1| lysyl-tRNA synthetase [Streptococcus suis BM407]
 gi|166230593|sp|A4VZY0|SYK_STRS2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230595|sp|A4VTP6|SYK_STRSY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145688979|gb|ABP89485.1| Lysyl-tRNA synthetase (class II) [Streptococcus suis 05ZYH33]
 gi|145691164|gb|ABP91669.1| Lysyl-tRNA synthetase (class II) [Streptococcus suis 98HAH33]
 gi|251815644|emb|CAZ51232.1| lysyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817613|emb|CAZ55360.1| lysyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819501|emb|CAR45058.1| lysyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319757641|gb|ADV69583.1| lysyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 496

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 150/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETRYRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     II+  A+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADYQDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIAIHEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            I + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RIHMVDAIKEQTGVDFWQEMS------FEEAKALAAEHKVPVEKHHTEVGQIINSFFEEY 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEAT--LIQPTFVYGHPVAVSPLAKKNDEDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   +D D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 ERFEAQAKAKELGDDEATGVDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|83319783|ref|YP_424778.1| lysyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|123767562|sp|Q2SR35|SYK_MYCCT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|83283669|gb|ABC01601.1| lysyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 500

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 160/368 (43%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR                R  I  +++ +     ++E+++ 
Sbjct: 145 LRPLPDKHAGIQDIEEKYRRRYVDLIMNHDVRKTFQARTKIIRTMQNFLDNRGYMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  + F T     + +   +YL+ + E   K+L+  G E ++     +RN 
Sbjct: 205 ILHSLKGGAS-AKPFVTHY---NVLNTDVYLRIATELHLKRLIVGGFEGVYEIGRIFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+E    LM     I R      N   +  + NV  +     +
Sbjct: 261 GMSTRHNPEFTSIELYVAYEDMFFLMDLTEEIFRVCNSAVNSSSVIEYNNVKIDLSKPFK 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
            + + +   +   +D    +              A++  + V  H ++   I +    E 
Sbjct: 321 RLHMVDGIKQVTGVDFWQEMTV------EQALELAKKHNVYVEKHQESVGHIINLFYEEF 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    I   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 375 VEST--IVEPTFVYGHPKEISPLAKSNPNDPRFTDRFELFIIGREYANAFSELNDPIDQY 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++E+ K  +E   +D DF+  L   MP ++GI +G DRLVML+T  ++I +V+ 
Sbjct: 433 ERFKAQLEEESKGNDEANDMDIDFVEALEHAMPPTAGIGIGIDRLVMLLTNCDSIKDVLL 492

Query: 345 TPFSQSNQ 352
            P  +  +
Sbjct: 493 FPQMKPKE 500


>gi|320353044|ref|YP_004194383.1| lysyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320121546|gb|ADW17092.1| lysyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 495

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 104/370 (28%), Positives = 163/370 (44%), Gaps = 29/370 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR  I   +RE+     ++E+++ 
Sbjct: 139 LRPLPEKFHGLTDVETRYRQRYLDLIVNPEAREVFKKRVEIIRLIREFLNNRGYMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  T  + F T     + +   LYL+ +PE   K+LL  G EK+F     +RN 
Sbjct: 199 MMQPVPGGAT-AKPFRTH---HNALDMDLYLRIAPELYLKRLLVGGFEKVFEINRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+ +Y  LM     ++   A         S+Q    N      
Sbjct: 255 GLSTRHNPEFTMLEFYQAYATYHDLMDLTEEMVSWLAHEVTGSMDISYQGTPVNLAPPWR 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E+  +   +D           D   +   A+Q GI +          + +    +
Sbjct: 315 RLTMEESLVQIGGLDPAV------LEDDTAVMALAKQKGIELQPGAGPGKAKTELFELLV 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFEL+    E+ NA  EL DPI+Q  
Sbjct: 369 EER--LIDPTFITSYPTEVSPLARRNEEDPTVTDRFELFITGREIANAFSELNDPIDQLQ 426

Query: 287 RFEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           RF+K++ E+     E +P +D D++  L   MP ++G  +G DRLVML+T + +I +VI 
Sbjct: 427 RFQKQIDER-GEDEEIHPVLDRDYVRALEYGMPSAAGEGIGIDRLVMLLTDSPSIRDVIL 485

Query: 345 TPFSQSNQEE 354
            P  +    E
Sbjct: 486 FPQMKPEIGE 495


>gi|328955978|ref|YP_004373311.1| lysyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456302|gb|AEB07496.1| lysyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 508

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 154/365 (42%), Gaps = 27/365 (7%)

Query: 2   HQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     +++  YR+R               KR+ I S+ R +   + + E+++  
Sbjct: 155 RPLPEKFHGLSDKETRYRQRYVDLIMNDEVRSTFEKRSRILSAFRRHMDADGYFEVETPI 214

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  T  + F T     + + +  YL+ + E   K+LL  G E+++     +RN  
Sbjct: 215 LQNIQGGAT-AKPFITH---HNALNQENYLRIATELHLKRLLVGGFERVYEIGRIFRNEG 270

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEY 167
               H PEFT +E YRA+   E +      +I+ A    N  +   +Q    +       
Sbjct: 271 MDQTHNPEFTTMEAYRAYSDLEGMKALAQGVIKAANAAVNSSERIDYQGRAIDLSGTWVS 330

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
             +AE  +                     L   A   GI V  + T   + + +  E  E
Sbjct: 331 RPMAEIVSEALG------SPVSLDTRVEELRAHAAAHGIEVEAEWTAGRLIAELYDEIGE 384

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P   I   T +  YP   S LA     DPR T RFEL     E  NA  EL DP++Q  R
Sbjct: 385 PT--IIDPTFVCDYPVEVSPLAKRRRDDPRLTHRFELVIAGHEYANAFSELNDPVDQAER 442

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F ++++EK    +E    D DF+  L   MP + GI +G DR+VML+T + +I +V+  P
Sbjct: 443 FRRQVEEKASGDDEAMEYDADFIRALEYGMPPAGGIGIGVDRVVMLLTNSASIRDVLLFP 502

Query: 347 FSQSN 351
             +  
Sbjct: 503 HMRPE 507


>gi|225868226|ref|YP_002744174.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225701502|emb|CAW98673.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 497

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 148/366 (40%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRSSLERFVTRSKMISEIRRYLDGLGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ +PE   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQDIDMVLRIAPELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M     II+ AA+    +    +Q           
Sbjct: 260 GMDATHNPEFTSIEVYEAYADYLDMMTLTEGIIQHAAKAVKGEGPIDYQGTEIKLHEPFR 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      ID    +   +          A +  + V    T    I +      
Sbjct: 320 RVHMVDAIKEVTGIDFWPEMTFEEAT------ALANEKHVPVEKHFTSVGHIINAFFEAF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEDT--LIQPTFVYGHPVEVSPLAKKNPEDSRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +   K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFKAQAAAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 491

Query: 345 TPFSQS 350
            P  + 
Sbjct: 492 FPTMKP 497


>gi|57506076|ref|ZP_00371999.1| lysyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57015684|gb|EAL52475.1| lysyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 502

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 156/368 (42%), Gaps = 27/368 (7%)

Query: 3   QIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R                R+ I S +R +F    F+E+++  +
Sbjct: 142 PLPEKFHGLTDIEQRYRKRYVDMIMNADVRKDFFTRSKIVSLIRHFFENKGFLEVETPMM 201

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN   
Sbjct: 202 HPIAGGA-NAKPFVT---FHNALGVERFLRIAPELHLKRLIVGGFEAVFEINRCFRNEGM 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A+ +Y  LM     +     +  N +   +F +   +     E I
Sbjct: 258 DLTHNPEFTTIEFYWAYHNYNDLMDLTEELFALLLKELNLETKITFDDKIIDFSRPFERI 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +  EA  +Y N+            ++  +  + +  G           + + +    +E 
Sbjct: 318 SYKEALEKYGNL------SKEIIENKEQILNKLKSDGFEANEKLDLGHLQAELFDNYVED 371

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L+     D    +RFEL+    E+ N  +EL DP++Q  RF
Sbjct: 372 K--LINPTFIIDFPISISPLSRRSEKDENIAERFELFIAGREIANGFNELNDPLDQYERF 429

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+++ K     E   +DEDF+  L   MP ++G  +G DRLVML+T   +I +VI  P 
Sbjct: 430 LKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGEGIGIDRLVMLLTEKKSIRDVILFPA 489

Query: 348 SQSNQEEI 355
            +  + E+
Sbjct: 490 MRPLKSEL 497


>gi|312867292|ref|ZP_07727501.1| lysine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096993|gb|EFQ55228.1| lysine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 438

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 86  LRPLPEKFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETP 145

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 146 VLHNEAGGAA-AKPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 201

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +  +M     II+ AA+  +      +Q          +
Sbjct: 202 GMDATHNPEFTSIEVYQAYADFHDIMDLTEGIIQHAAKAVHGDGPIDYQGTEIKINEPFK 261

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 262 RVHMVDAIKEITGVDFWQDMT------FEEAVALANEKHVPVEKHYTEVGQIINAFFEEF 315

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 316 VEET--LTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 373

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 374 QRFEAQARAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTNVTTIRDVLL 433

Query: 345 TPFSQ 349
            P  +
Sbjct: 434 FPTMK 438


>gi|238897259|ref|YP_002922936.1| lysine tRNA synthetase, inducible [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229465014|gb|ACQ66788.1| lysine tRNA synthetase, inducible [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 504

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 90/367 (24%), Positives = 163/367 (44%), Gaps = 26/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   S LR++ +   F+E+++ 
Sbjct: 149 LRPLPDKFHGLLDQEARYRQRYLDLIVNEKSRKNFILRSKTISMLRQFMMGKGFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G ++IF     +RN 
Sbjct: 209 MMQSIPGGAA-ARPFLTH---HNALNIDMYLRIAPELYLKRLVVGGFDRIFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  ++ L++    + R     V    +  +     +     +
Sbjct: 265 GISLRHNPEFTMMELYMAYADHQDLIELTEELFRELTLNVLGTHVVKYGEHIFDFSQPFQ 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ EA  +Y        ++  D  D++   L A+   +RV        I   I  E  
Sbjct: 325 KWTMKEAIQKY-----RPEININDLEDKNKAILIAESLDVRVEKFWELGRIQCEIFEETA 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +     RFE +    E+ N   EL D  +Q  
Sbjct: 380 EKH--LIQPTFITEYPAEVSPLARRNDHNSFIADRFEFFIAGKEIGNGFSELNDAEDQAQ 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF +++  K+K  +E    D+D++  L   +P ++G+ +G DR++ML+T + NI +VI  
Sbjct: 438 RFTEQLNSKEKGDHEAMSYDQDYIIALEHGLPPTAGLGIGIDRMIMLLTNSINIRDVILF 497

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 498 PTMRPLK 504


>gi|145356687|ref|XP_001422558.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582801|gb|ABP00875.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 582

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 160/374 (42%), Gaps = 28/374 (7%)

Query: 1   MHQIP-SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      + +  +R R                R+ I   +R+Y  +  F+E+++  
Sbjct: 205 LKMLPGFSGLKDVETRFRMRFLDLMMNNEVRDTFYIRSNIIRYIRKYLDDRDFLEVETPM 264

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G  T  R F T     + +   LY++ +PE   K+L+  G E+++     +RN  
Sbjct: 265 MNMIAGGAT-ARPFITH---HNDLNMTLYMRIAPELYLKQLVVGGIERVYEIGRQFRNEG 320

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCN 160
               H PEFT  E+Y+A+  Y+ LM+    +I               +        +  +
Sbjct: 321 IDMTHNPEFTTCEFYQAYADYDDLMQMTEEMISGMVYAIKGSYKIQYHAKGPDEDPIEID 380

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  I++        NI   +T D   Q +   L    ++ G+ ++   T + +   
Sbjct: 381 FTPPFRRISMVSGLEEALNIKFPST-DFSTQENEDFLKELIKKLGVEMSPPYTTARMLDE 439

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           ++ E +E    +     +  +P   S LA  +   P  T+RFEL+    ELCNA  EL D
Sbjct: 440 LVGEYLESQ--LVNPGFICDHPQIMSPLAKYHRNIPGMTERFELFVNTKELCNAYTELND 497

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           PI+QR RF+++ + K    +E   IDE F+  L   +P + G  +G DRL ML+   NNI
Sbjct: 498 PIDQRERFDEQAKAKSSGDDEAMLIDEVFVQSLEYGLPPTGGWGLGVDRLTMLLADKNNI 557

Query: 340 NEVIWTPFSQSNQE 353
            EV+  P  +  + 
Sbjct: 558 KEVLLFPAMKPEEN 571


>gi|54297690|ref|YP_124059.1| hypothetical protein lpp1741 [Legionella pneumophila str. Paris]
 gi|81370415|sp|Q5X4D5|SYK_LEGPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|53751475|emb|CAH12893.1| hypothetical protein lpp1741 [Legionella pneumophila str. Paris]
          Length = 496

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 89/364 (24%), Positives = 149/364 (40%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD-------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D              +   R   L R+ +  + RE+  +N F+E+++ 
Sbjct: 143 LRPLPDKFHGLADQELKYRKRYVDLIANEDSRKTFLIRSHLIKAFREFMDDNHFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 203 MMHPIPGGA-LARPFVTH---HNTLDMTMYLRIAPELYLKRLVVGGFERVYEINRNFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM     +      +V   +   +Q    +     E
Sbjct: 259 GISTRHNPEFTMLEFYQAYADYNDLMNFTEQLFHYLCDKVLATRQIEYQGQVIDFNKPFE 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V EA  +Y        +                  G+     D    +   +  E +
Sbjct: 319 RLSVKEAILKY-----HPDIKAQQLETLEGCRTLLNDLGLPYKETDGLGKLQIILFEETV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 374 EHQ--LFQPTFITEYPTEISPLARRSDTNPEVTDRFEFFIAGREIANGFSELNDAEDQAE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++EK     E    D D++  L   +P ++G  +G DRLVML T + +I +VI  
Sbjct: 432 RFRKQVEEKDAGDLEAMHFDSDYIEALEYGLPPTAGEGIGIDRLVMLFTNSQSIRDVILF 491

Query: 346 PFSQ 349
           P  +
Sbjct: 492 PHLR 495


>gi|121609996|ref|YP_997803.1| lysyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|121554636|gb|ABM58785.1| lysyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 527

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 155/366 (42%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   S LRE+ V + F+E+++ 
Sbjct: 170 LRPLPDKFHGLADQEQKYRQRYVDLITDAQARQRFVARSKAVSDLREFMVGHGFLEVETP 229

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + R F T     + + + +YL+ +PE   K+L+  G E++F    ++RN 
Sbjct: 230 MLHPIPGGA-NARPFVTH---HNALEQQMYLRIAPELYLKRLIVGGFERVFEINRSYRNE 285

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT LE+Y A+ +Y  +M     +IR  A +       S+Q    +      
Sbjct: 286 GISVRHNPEFTTLEFYAAYWNYLDVMDFTETLIRAVALKATGSLQMSYQGRAVDLAQPFA 345

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA  ++               D   L    ++ G     D   S     + +   
Sbjct: 346 RLSIREAIFQHT-------EAGAHVDDAAWLISALKKLGRTQEADKLSSRTLVSLQLLYF 398

Query: 227 EPNLGI--NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E  +       T +  +P   S LA      P  T+RFELY    E  N   EL D  EQ
Sbjct: 399 EETVEDKLWQPTFIMEHPTEISPLARANDLRPEVTERFELYITGREFGNGFSELNDAQEQ 458

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             RF  ++  K    +E    D DF+  L   MP + G  +G DRL+ML+T + +I +VI
Sbjct: 459 AARFHTQVAAKDGGDDEAMFHDHDFVRALEYGMPPTGGCGIGIDRLMMLLTDSPSIRDVI 518

Query: 344 WTPFSQ 349
             P  +
Sbjct: 519 LFPALR 524


>gi|310794842|gb|EFQ30303.1| lysyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 620

 Score =  318 bits (815), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 80/374 (21%), Positives = 152/374 (40%), Gaps = 26/374 (6%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P + +  +D   R              R  L+ R+ + + +R +F    FIE+++ 
Sbjct: 230 LHTLPDEYYGFKDHEERHRKRYLDLIMNDKSRQILITRSKMITYIRRFFDNRDFIEVETP 289

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T    F T     + +   ++++ +PE   K+L+  G  +++     +RN 
Sbjct: 290 MMGPIAGGATAA-PFVTH---HNDLDMTMFMRIAPELYLKELVVGGLHRVYEIGRQFRNE 345

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y+A      +M     ++    +       +  +         N 
Sbjct: 346 GIDLTHNPEFTTCEFYQAFADVYDIMDLTEELVSGLVKHLTGGYKTKFHTQHGEVYEVNW 405

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
               +   +     +                    L    ++  +  +   T + +  ++
Sbjct: 406 EKPWKRFEMIPELEKATGEKFPPADQLHTAETNEFLQKVLKKMKLECSPPLTNARMIDKL 465

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        + +  +P   S LA  +   P   +RFE + C  E+ NA  EL DP
Sbjct: 466 VGEYIEEQCV--NPSFIFGHPQVMSPLAKYHRETPGLCERFEAFVCKKEIVNAYTELNDP 523

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   IDE+F   L   +P + G  MG DR+VM +T   +I 
Sbjct: 524 FDQRLRFEEQARQKDQGDDEAQLIDENFCMSLEYGLPPTGGWGMGIDRMVMFLTDNYSIR 583

Query: 341 EVIWTPFSQSNQEE 354
           EV+  PF +  ++ 
Sbjct: 584 EVLAFPFMKEEKQA 597


>gi|71280476|ref|YP_270737.1| lysyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123747345|sp|Q47WT5|SYK_COLP3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71146216|gb|AAZ26689.1| lysyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 524

 Score =  318 bits (815), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 89/390 (22%), Positives = 161/390 (41%), Gaps = 47/390 (12%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R +  +  F+E+++ 
Sbjct: 145 LRPLPEKFHGLSDQETKYRQRYIDLIINEDTRNTFKMRSKIVAGIRNFLTQRDFMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  T  + F T     +     +YL+ +PE + K+L+  G +++F    ++RN 
Sbjct: 205 MLQIIPGGAT-AKPFMTH---HNTFDLDMYLRIAPELNLKRLVVGGFDRVFEINRSFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-----------NQKIFSFQN 156
                H PEFTM+E+Y+A+  Y  LM     ++R  A+             N +    + 
Sbjct: 261 GISTRHNPEFTMIEFYQAYADYHDLMNTTEEMLRTIAQDVLGTTTIRNTVKNSEGEVVEE 320

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD-----QPDRHLLYLQAQQAGIR---- 207
              +       +++ +A  +Y     G    +       + +   +   A+  G++    
Sbjct: 321 KFYDLGKPFVRLSMVDAILQYGKDHRGAEQLDEAALRDPENNFDAIKAMAKAVGVKENSA 380

Query: 208 ---VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFEL 264
                      +IF  +          ++  T +  YP   S LA     +   T RFE 
Sbjct: 381 SKVWGPGKYICEIFEEVAEHL------LDQPTFITEYPWEVSPLARRNDENSFITDRFEF 434

Query: 265 YACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIA 323
           +    EL N   EL D  +Q  RF+K++ EK    +E    D D++  L   +P ++G  
Sbjct: 435 FVGGRELANGFSELNDAEDQAERFQKQVAEKDAGDDEAMHYDADYINALEYGLPPTAGEG 494

Query: 324 MGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           +G DRLVML T +  I +VI  P  +   E
Sbjct: 495 IGIDRLVMLFTDSPTIKDVILFPHMRPEAE 524


>gi|302023490|ref|ZP_07248701.1| lysyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 496

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 149/365 (40%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETRYRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II+  A+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADYLDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIAIHEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            I + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RIHMVDAIKEQTGVDFWQEMS------FEEAKALAAEHKVPVEKHHTEVGQIINSFFEEY 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEAT--LIQPTFVYGHPVAVSPLAKKNDEDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   +D D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 ERFEAQAKAKELGDDEATGVDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|225436215|ref|XP_002269584.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 619

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 82/365 (22%), Positives = 153/365 (41%), Gaps = 28/365 (7%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R  I S +R +     F+E+++  +    G   
Sbjct: 249 LKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMMNMIAGGAA 308

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LY++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 309 -ARPFVTH---HNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 364

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A   Y  +M+    ++    +          +        +  +       I 
Sbjct: 365 TTCEFYMAFADYNDVMELTEKMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPFRRID 424

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E   + A++ +   L + +      L     +  I+     T + +  +++   +E  
Sbjct: 425 MIEDLEKMADLSIPKDLSSDEAN--KYLVDACLKFDIKCPPPQTTARLLDKLVGHFLEET 482

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 T +  +P   S LA  + +    T+RFEL+    ELCNA  EL DP+ QR RF 
Sbjct: 483 CV--NPTFITNHPEIMSPLAKWHRSKQSLTERFELFVNKHELCNAYTELNDPVVQRQRFA 540

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +++++++   +E   +DE F   L   +P + G  +G DRL M++T + NI EV+  P  
Sbjct: 541 EQLKDRQSGDDEAMALDETFCMALEYGLPPTGGWGLGIDRLTMMLTDSQNIKEVLLFPAM 600

Query: 349 QSNQE 353
           +   E
Sbjct: 601 KPQDE 605


>gi|330832369|ref|YP_004401194.1| lysyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306592|gb|AEB81008.1| lysyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 496

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 150/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETRYRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     II+  A+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADYQDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIAIHEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            I + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RIHMVDAIKEQTGVDFWQEMS------FEEAKALAAEHKVPVEKHHTEVGQIINSFFEEY 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEAT--LIQPTFVYGHPVAVSPLAKKNDEDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   +D D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 ERFEAQAKAKELGDDEATGVDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|327398508|ref|YP_004339377.1| Lysyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181137|gb|AEA33318.1| Lysyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 503

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 169/370 (45%), Gaps = 28/370 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R             +++R++I +++RE+ ++++FIE+++ 
Sbjct: 146 LRPLPEKWHGLKDKELRYRQRYVDLIVNDQTRQMVIERSLIINAVREFMIKSRFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L          + F T L   + +   LYL+ +PE   K+L+  G E+IF     +RN 
Sbjct: 206 MLHKLVTGAA-AKPFVTHL---NALDMTLYLRIAPELYLKRLVVGGLERIFEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN--QKIFSFQNVNCNPFSEP 165
                H PEFTM+E+Y A++ Y  LM     +     +      +   F     +     
Sbjct: 262 GMDLKHNPEFTMMEFYIAYKDYNFLMDFTEELFEYILDKLGIDDRKIEFDGNTIDFSRPW 321

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +   E     A +       +    D+      A +    V    +   I + I    
Sbjct: 322 RRLDFYEGLKEIAGV------GDDILNDKKKALEYALKLEKSVDDSFSHEKILAEIFDAL 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP   S LA     +P  T RFELY   +E+ NA  EL DP +Q+
Sbjct: 376 VEPK--LINPTFVVGYPVAISPLAKRNRDNPNITDRFELYIGTMEIANAFSELNDPFDQK 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  +++E+KK   E    DED++  L   +P ++G  +G DRLVML+TG ++I +VI 
Sbjct: 434 ERFLNQLEERKKGDEEASMYDEDYIKALEYGLPPTAGEGIGIDRLVMLLTGNSSIRDVIL 493

Query: 345 TPFSQSNQEE 354
            P  +  +EE
Sbjct: 494 FPLMRDKKEE 503


>gi|46128767|ref|XP_388937.1| hypothetical protein FG08761.1 [Gibberella zeae PH-1]
          Length = 610

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 86/374 (22%), Positives = 157/374 (41%), Gaps = 26/374 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +  +D    YR+R              + R+ + + +R+YF E  F+E+++ 
Sbjct: 220 LHALPDDHYGFKDLEQRYRKRYLDLICNEKARNVFITRSKMITWIRKYFDERDFVEVETP 279

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F+T     +    P++++ +PE   K L+  G  +++     +RN 
Sbjct: 280 MMNQIAGGAT-AKPFTTH---HNEYDMPMFMRVAPELYLKMLVVGGLNRVYEIGRQFRNE 335

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT +E+Y A+     LMK    +I    +       +  +         N 
Sbjct: 336 GADLTHNPEFTTIEFYEAYADVNDLMKTTEEMISGLVKYLTGGYKTTFHTQSGEKYEVNW 395

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +      +             +      Q     L    ++  +      T + +  ++
Sbjct: 396 EAPWPRYEMIPTLEEATGEKFPSGDQLHTQETNEFLKNVLKKMNLECTPPLTNARMIDKL 455

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        + +  +P   S LA  +   P   +RFE + C  E+ NA  EL DP
Sbjct: 456 VGEFIEEKCV--NPSFITGHPQVMSPLAKYHREIPGLCERFEAFVCKKEIANAYTELNDP 513

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   +DE+F   L   +P + G  MG DR+VM +T    I 
Sbjct: 514 FDQRLRFEEQARQKDQGDDEAQLVDENFCTSLEYGLPPTGGWGMGIDRMVMFLTDNYTIR 573

Query: 341 EVIWTPFSQSNQEE 354
           EV+  PF + ++ E
Sbjct: 574 EVLTFPFMKDDKLE 587


>gi|313247646|emb|CBY15807.1| unnamed protein product [Oikopleura dioica]
          Length = 594

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 87/374 (23%), Positives = 150/374 (40%), Gaps = 28/374 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P       +++  YR+R              + R  I   LR Y   N F+E+++ 
Sbjct: 216 LHMLPKLHDGLKDKETRYRKRHLDLIMNADVRHKFIARAQIIQYLRTYLANNGFLEVETP 275

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G +++F     +RN 
Sbjct: 276 MMNMIAGGAT-AKPFKT---FHNDLSMDLFMRVAPELYLKMLVVGGYDRVFEIGKNFRNE 331

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+   + LMK    ++    +          +           
Sbjct: 332 GIDMTHNPEFTACEFYMAYADADDLMKITEELLSGMVKAITGDYKVKYHPEGPDGPVWEA 391

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     +   +     +     L        +  R  L     +  I  +   T + +  
Sbjct: 392 DFSPPFKRFYMFPELEKILKTKLPCPTTLATEEARAALDAICVKQNIDCSAPRTSARLLD 451

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + + P  T+RFEL+    E+ NA  EL 
Sbjct: 452 KLVGEYLEE--ASINPTFICDHPQVMSPLAKWHRSAPGLTERFELFVFKKEIANAYTELN 509

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP  QR RF ++M +K     E    DE++   L   +P + G  +G DRL M +T +NN
Sbjct: 510 DPKVQRDRFSQQMADKAAGDEEAQGYDENYCQALEYGLPPTGGWGLGVDRLTMFLTDSNN 569

Query: 339 INEVIWTPFSQSNQ 352
           I EVI  P  +  +
Sbjct: 570 IKEVILFPAMKPEE 583


>gi|223933785|ref|ZP_03625756.1| lysyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897553|gb|EEF63943.1| lysyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 496

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 149/365 (40%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETRYRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II+  A+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADYLDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIAIHEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            I + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RIHMVDAIKEQTGVDFWQEMS------FEEAKALAAEHKVPVEKHHTEVGQIINSFFEEY 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEAT--LIQPTFVYGHPVAVSPLAKKNDEDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   +D D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 ERFEAQAKAKELGDDEATGVDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|163846800|ref|YP_001634844.1| lysyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222524619|ref|YP_002569090.1| lysyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|189082954|sp|A9WK04|SYK_CHLAA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|163668089|gb|ABY34455.1| lysyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222448498|gb|ACM52764.1| lysyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 491

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 160/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++  P +    +D   R             RR     R  + S++R    E  F+E+++ 
Sbjct: 135 INPPPEKWAGLQDVEERHRQRYLDLIVNRDRREIFRARARVISTMRRVLDERGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + + + LYL+ + E   K+L+  G   ++     +RN 
Sbjct: 195 VLQPLYGGAA-ARPFIT---YHNALGQNLYLRIATELYLKRLIVGGFPGVYEIGKNFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  Y  +M     ++      V      ++Q    +      
Sbjct: 251 GVDRSHNPEFTMMECYQAYADYHAMMTLVEEMLSEICLAVHGTTTITYQGRELDFRPPWP 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A A A    ID+          D   L       G+RV    +W+     +  E +
Sbjct: 311 RIAMATAIADRTGIDITQI------TDLDALQEAISARGLRVERKASWAKQVDELFSEFV 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P+  +   T +  YP   S LA   P  P FT+RFE +   +E+ NA  EL DP +Q  
Sbjct: 365 QPH--LFQPTFIIDYPVAMSPLAKRIPDRPDFTERFEAFIAGMEIGNAFTELNDPFDQEE 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++       E + +DEDF+  L   MP + G+ +G DRLVM++T  +NI EVI  
Sbjct: 423 RFREQLRAFAAGDEEAHQMDEDFINALRYGMPPTGGLGVGIDRLVMVLTDQSNIREVILF 482

Query: 346 PFSQSNQEE 354
           P  +   +E
Sbjct: 483 PHLRERSDE 491


>gi|93006235|ref|YP_580672.1| lysyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|123264560|sp|Q1QAW5|SYK_PSYCK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|92393913|gb|ABE75188.1| lysyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 514

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 163/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     D   R              R   + R+ + S +R++ +  +F+E+++ 
Sbjct: 156 LRPMPNKFHGLADVEARYRNRHLDLMTNETTRDTFMVRSQVISGIRKFMLNERFMEVETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +  PLYL+ +PE   K+L+  G EK+F    ++RN 
Sbjct: 216 MMHPIPGGAV-ARPFVTH---HNALDMPLYLRIAPELYLKRLVVGGFEKVFEINRSFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM     +    A ++      ++Q    +  +   
Sbjct: 272 GVSTRHNPEFTMIEFYQAYADYHDLMDLTERLFNELATDILGTTEITYQEEAISLKAPFI 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ-AGIRVAHDDTWSDIFSRILIEK 225
            +++++A A+YA        D     DR  L   A      +V        + + I  E 
Sbjct: 332 RLSMSDAIAKYA-----ENFDMNRINDREYLAEYASTTLKQQVKDVFGVGKLQTIIFEET 386

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +P  T RFEL+    EL N   EL DP +Q 
Sbjct: 387 AEHQ--LRQPTFITEYPAETSPLARRSDDNPEITDRFELFVGGRELANGFSELNDPEDQA 444

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  ++ EK    +E    D +++  L   +P ++G  +G DRLVML+T + +I +VI 
Sbjct: 445 ERFLGQVAEKDAGDDEAMHFDAEYIEALSYGLPPTAGEGIGIDRLVMLLTDSASIRDVIL 504

Query: 345 TPFSQ 349
            P  +
Sbjct: 505 FPHMR 509


>gi|157736905|ref|YP_001489588.1| lysyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980066|sp|A8ESJ5|SYK_ARCB4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157698759|gb|ABV66919.1| lysyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 504

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 85/369 (23%), Positives = 156/369 (42%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S  R +F    F+E+++ 
Sbjct: 141 ISPLPEKFHGIQDKELRYRQRYLDLIMNSEVRKTFHIRSKVISLTRRFFENKGFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN 
Sbjct: 201 MMHPIAGGA-NAKPFVTHF---NALGVDRFLRIAPELYLKRLIVGGFEAVFEINRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+++Y+ L+           E  N             F++   
Sbjct: 257 GMDATHNPEFTSIEFYWAYKTYKDLIVLTKEYFEYLFENLNLPTILPYGEFKIDFNKFSE 316

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I + ++      +            D+  +    +   +    +     +   +  E +E
Sbjct: 317 IPLIQSLYEIGGVPQDIV------EDKDKILAFLKANNLEANANLNLGQLQGELFDEFVE 370

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA      P  T RFEL+    E+ NA  EL DPI+Q  R
Sbjct: 371 AK--LINPTFITEYPVEISPLARRSDEKPHLTDRFELFIAGKEIANAFSELNDPIDQLQR 428

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE ++  K+   +E + +DEDF+  L   M  ++G  +G DRLVM++T  ++I +V+  P
Sbjct: 429 FEGQIAAKEAGDDEAHEMDEDFVNALSYGMAPTAGQGIGIDRLVMMLTNEHSIRDVLLFP 488

Query: 347 FSQSNQEEI 355
             +  ++EI
Sbjct: 489 AMKPIKQEI 497


>gi|291526254|emb|CBK91841.1| Lysyl-tRNA synthetase (class II) [Eubacterium rectale DSM 17629]
          Length = 687

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 101/365 (27%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R +     F+E+++ 
Sbjct: 182 LQILPEKFHGLTDTDTRYRQRYVDLIMNQESKEVFIKRSQILKEIRNFLAGRDFMEVETP 241

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 242 MLVSNAGGAA-ARPFETHY---NALNEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 297

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+   ++ R  A +V      S+  V  +      
Sbjct: 298 GVDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGSTKISYNGVEIDLGKPFA 357

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA +D          PD       A +  I         DI +    E  
Sbjct: 358 RMTMIDAIKKYAGVDFDQV------PDDAAAKKLADEHHIEYEERHKKGDIVNLFFEEYC 411

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P+DP   +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 412 EKE--LIQPTFIMDHPIEISPLTKKKPSDPTKVERFELFCNTWEMCNAYSELNDPIDQRE 469

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +        +E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 470 RFAAQDANAAAGDDEAEHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLF 529

Query: 346 PFSQS 350
           P  +S
Sbjct: 530 PTMKS 534


>gi|114776308|ref|ZP_01451353.1| Lysyl-tRNA synthetase class II [Mariprofundus ferrooxydans PV-1]
 gi|114553138|gb|EAU55536.1| Lysyl-tRNA synthetase class II [Mariprofundus ferrooxydans PV-1]
          Length = 509

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 159/368 (43%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I S LR+   E  FIE+++ 
Sbjct: 154 LRPLPEKWHGLSDVETRYRQRYVDLMVTPESRDTFRQRSRIVSLLRQGLEERGFIEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R FST     + +   L+L+ +PE   K+LL  G E++F     +RN 
Sbjct: 214 MLQPEAGGAA-ARPFSTH---HNALNMELFLRIAPELYLKRLLVGGFERVFEMNRNFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E+Y+A+  +   M     ++R  A     +   ++ V+ N     + 
Sbjct: 270 GSDATHNPEFTMVEFYQAYADFNDAMDTTEGLMRSIATTLGCEQVEWEGVDINLTQPFKR 329

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEK 225
           + + E+       D    L      D+ LL     Q         TW        +  E 
Sbjct: 330 VRLDESV-----FDRRPDLRG-HANDKALLATVCMQVIPDFKPLITWKAGHYLLALFEEL 383

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP   S LA     D   T RFEL+    E+ N   EL DP +QR
Sbjct: 384 VEPE--LLQPTFITHYPVDVSPLARRSNDDATVTDRFELFVAGREMANGFSELNDPDDQR 441

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R   + Q K     E   +DEDFL  L   MP ++G+ +G DRLVM++TG ++I +V+ 
Sbjct: 442 GRLVAQAQAKAAGDAEASGVDEDFLRALEFGMPPAAGVGIGVDRLVMMLTGQHSIRDVLL 501

Query: 345 TPFSQSNQ 352
            P  +  Q
Sbjct: 502 FPHMRPEQ 509


>gi|322489782|emb|CBZ25042.1| putative lysyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 586

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 88/377 (23%), Positives = 153/377 (40%), Gaps = 32/377 (8%)

Query: 2   HQIPSQPWWNR--DFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P   +     +  +R+R              ++R  I   +R++F E  F+E+++  
Sbjct: 198 HMLPDDYFGLSSFEQRFRQRYLDFIVNRDNIKTFIQRANIIKYIRKFFDERDFVEVETPV 257

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L    G     R F T     + + + ++L+ +PE   K+L+  G ++++     +RN  
Sbjct: 258 LNQIAGGAA-ARPFVTH---HNDLNQTMFLRIAPELYLKELVVGGMDRVYEVGKQFRNEG 313

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN---------- 158
               H PEFT  E Y A+  Y   M    +++   A   +                    
Sbjct: 314 IDLTHNPEFTSCEAYWAYMDYHDWMTATEDLLYGLAMELHGSPIVRYAPKDSEGKPLPEV 373

Query: 159 -CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             N     + + +     +   +     +D         L    ++         T   +
Sbjct: 374 TFNFNKPFKRLHIIPELEKRLKVSFDN-VDFESDAGIQFLMDLCKKHKADCPPPYTAPRL 432

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              ++ E +EP         +  +P   S LA  +  DPR T+RFEL+    EL NA  E
Sbjct: 433 LDALIAEFLEPECHD--PCFICDHPRVMSPLAKWHRNDPRLTERFELFVNKKELANAYTE 490

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGA 336
           L +PI QR  F K+++ + K   E+  IDE F+A L   +P + G  +G DRLVM +T  
Sbjct: 491 LNNPIVQREEFVKQVRNRDKGDVESMEIDEGFVAALEHALPPTGGWGLGIDRLVMFLTSQ 550

Query: 337 NNINEVIWTPFSQSNQE 353
           +NI EV+  P  +   +
Sbjct: 551 SNIKEVLLFPAMKPEGK 567


>gi|297171211|gb|ADI22219.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF0200_34B24]
 gi|297171326|gb|ADI22331.1| lysyl-tRNA synthetase (class II) [uncultured actinobacterium
           HF0500_01C15]
          Length = 512

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 94/380 (24%), Positives = 168/380 (44%), Gaps = 41/380 (10%)

Query: 1   MHQIP---------------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLRE 34
           +  +P                  + +++  YR+R                R+ + +SLR 
Sbjct: 146 LRPLPFGKVETDAQTGQRVVHSGFADQEMRYRQRYADLAVNPEVREVFRLRSRVITSLRG 205

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +     F+E+++  LQ   G     + F TE    + + + +YL+ + E   K+L+  G 
Sbjct: 206 FLDSQGFLEVETPVLQPLYGGAA-AKPFVTE---HNALSQTMYLRVADELYLKRLIVGGL 261

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFS 153
           ++++  +  +RN      H PEFTMLEWY+A   Y+  M+    +++   + V   +   
Sbjct: 262 DRVYEISKDFRNEGLSRYHNPEFTMLEWYQAFTDYDSQMQLVEQMLQHVLDEVVGGRSVM 321

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
                 N     + + + ++ +     D           D+  L  +A++  I       
Sbjct: 322 LGETEINFDGRFDRLGLIDSLSEALGTD-------VHTMDQKALRSKAEELQIPDLEGAG 374

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
              +  ++  E +EP+  +   T +  +P   S LA  + +DPR T+RFELY    E+ N
Sbjct: 375 TGKLIDKLFGELVEPS--LVQPTFVVDHPKELSPLAKEHRSDPRLTERFELYIGGAEVFN 432

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              EL DPI+QR RFE +M  +     E + IDED++  L   MP + G+ MG DR VM+
Sbjct: 433 GFSELNDPIDQRSRFETQMSLRAAGDEEAHEIDEDYIRALEYGMPPTGGVGMGVDRFVMV 492

Query: 333 VTGANNINEVIWTPFSQSNQ 352
           +    +I +VI  P  +S +
Sbjct: 493 LANQQSIRDVILFPILRSEE 512


>gi|71065613|ref|YP_264340.1| lysyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|123761770|sp|Q4FSV2|SYK_PSYA2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71038598|gb|AAZ18906.1| lysyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 514

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 164/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     D   R              R   + R+ + S +R++ +  +F+E+++ 
Sbjct: 156 LRPMPNKFHGLADVEARYRNRHLDLMTNETTRDTFMVRSQVISGIRKFMLNERFMEVETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +  PLYL+ +PE   K+L+  G EK+F    ++RN 
Sbjct: 216 MMHPIPGGAV-ARPFVTH---HNALDMPLYLRIAPELYLKRLVVGGFEKVFEINRSFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM     +    A ++      ++Q  + +  +  E
Sbjct: 272 GVSTRHNPEFTMIEFYQAYADYHDLMDLTERLFNELATDILGTTEITYQEEDISLKAPFE 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ-AGIRVAHDDTWSDIFSRILIEK 225
            ++++ A A+YA        D     DR  L   A      +V        + + I  E 
Sbjct: 332 RLSMSNAIAKYA-----ENFDMARINDRDYLAEYASTTLKQQVKDVFGVGKLQTIIFEET 386

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  YPA  S LA     +P  T RFEL+    EL N   EL DP +Q 
Sbjct: 387 AEHQ--LRQPTFITEYPAETSPLARRSDDNPEITDRFELFVGGRELANGFSELNDPADQA 444

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  ++ EK    +E    D +++  L   +P ++G  +G DRLVML+T + +I +VI 
Sbjct: 445 ERFLGQVAEKDAGDDEAMHFDAEYIEALSYGLPPTAGEGIGIDRLVMLLTDSASIRDVIL 504

Query: 345 TPFSQ 349
            P  +
Sbjct: 505 FPHMR 509


>gi|146081824|ref|XP_001464365.1| lysyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134068457|emb|CAM66747.1| putative lysyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|322497768|emb|CBZ32844.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 586

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 88/377 (23%), Positives = 154/377 (40%), Gaps = 32/377 (8%)

Query: 2   HQIPSQPWWNR--DFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P   +     +  +R+R              ++R  I   +R++F E  F+E+++  
Sbjct: 198 HMLPDDYFGLSSFEQRFRQRYLDFIVNRDNIKTFIQRANIIKYIRKFFDERDFVEVETPM 257

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L    G     R F T     + + + ++L+ +PE   K+L+  G ++++     +RN  
Sbjct: 258 LNQIAGGAA-ARPFVTH---HNDLNQTMFLRIAPELYLKELVVGGMDRVYEIGKQFRNEG 313

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN---------- 158
               H PEFT  E Y A+  Y   M    +++   A   +                    
Sbjct: 314 IDLTHNPEFTSCEAYWAYMDYHDWMTATEDLLYGLAMELHGSPIVRYAPKDSEGKPLPEV 373

Query: 159 -CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             N     + + +     +   +     +D         L    ++         T   +
Sbjct: 374 TFNFNKPFKRLHIIPELEKRLQVSFDN-VDFESDAGIQFLMDLCEKHKADCPPPYTAPRL 432

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              ++ E +EP         +  +P   S LA  +  DPR T+RFEL+    EL NA  E
Sbjct: 433 LDALIAEFLEPECHD--PCFICDHPRVMSPLAKWHRNDPRLTERFELFVNKKELANAYTE 490

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGA 336
           L +PI QR  F K+++ + K  +E+  IDE F+A L   +P + G  +G DRLVM +T  
Sbjct: 491 LNNPIVQREEFVKQLRNRDKGDDESMEIDEGFVAALEHALPPTGGWGLGIDRLVMFLTSQ 550

Query: 337 NNINEVIWTPFSQSNQE 353
           +NI EV+  P  +   +
Sbjct: 551 SNIKEVLLFPAMKPEGK 567


>gi|262282664|ref|ZP_06060432.1| lysyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262261955|gb|EEY80653.1| lysyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 496

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 155/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFNRFVTRSKIISEIRRYLDGQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA  V      ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAISVCGDGPINYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    I +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMSFEEAT------ALAKEKKVPLEKHFTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|327470680|gb|EGF16136.1| lysine--tRNA ligase [Streptococcus sanguinis SK330]
 gi|332358916|gb|EGJ36737.1| lysine--tRNA ligase [Streptococcus sanguinis SK49]
 gi|332362485|gb|EGJ40285.1| lysine--tRNA ligase [Streptococcus sanguinis SK1056]
 gi|332367177|gb|EGJ44913.1| lysine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 496

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 155/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA   N     ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    + +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMSFEEAA------ALAKEKKVPLEKHFTEVGHVINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID DF+  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|322389927|ref|ZP_08063467.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321143363|gb|EFX38801.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 496

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 151/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     +     + L+ + E   K+L+  G E ++     +RN 
Sbjct: 204 VLHNEAGGAA-AKPFITH---HNAQNIDMVLRIATELHLKRLIVGGMECVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +  +M     II+ AA+  +      +Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFHDIMDLTEGIIQHAAKAVHGDGPIDYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMT------FEEAVALANEKHVPVEKHYTEVGQIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 QRFEAQARAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTNVTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|212529550|ref|XP_002144932.1| lysyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210074330|gb|EEA28417.1| lysyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 602

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 84/367 (22%), Positives = 150/367 (40%), Gaps = 25/367 (6%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +H +P +   + +  +R+R                R  I   +R +F    F E+++  +
Sbjct: 215 LHALP-RGLQDSETRFRQRYLDLIMNESSRKVFTTRAKIVRYVRNFFDSRDFTEVETPMM 273

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G  T  + F T     +     L+++ +PE   K L+  G E+++     +RN   
Sbjct: 274 NAIAGGAT-AKPFITH---HNEYNTNLFMRVAPELYLKMLIVGGLERVYELGRQFRNEGA 329

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNPFS 163
              H PEFT  E+Y A+     +M     ++    +       +  +       N N  +
Sbjct: 330 DLTHNPEFTTCEFYWAYADVYDVMNLTEELVSGLVKHVTGGYETTFHTQSGEVYNVNWQA 389

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               + +  A                 +     L    ++ G+  +   T + +  +++ 
Sbjct: 390 PWRRVEMIPALEEATGEKFPPGDQLHTEETNEFLKKVLKKTGVECSPPLTNARMLDKLVG 449

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E IE        T +  +P   S LA  +  +    +RFE + C  E+ NA  EL DP +
Sbjct: 450 EFIEETCV--NPTFIMGHPQMMSPLAKYHRQNVGLCERFEAFVCKKEIVNAYTELNDPFD 507

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE++ ++K +  +E   IDE+F   L   +P + G  MG DRLVM +T  + I EV
Sbjct: 508 QRLRFEEQARQKSQGDDEAQLIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTNNHTIREV 567

Query: 343 IWTPFSQ 349
           +  PF +
Sbjct: 568 LTFPFMK 574


>gi|255932391|ref|XP_002557752.1| Pc12g09250 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582371|emb|CAP80552.1| Pc12g09250 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 624

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 88/372 (23%), Positives = 158/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H IPS+ +   +++  +R+R             L+ R+ I S +R YF +  FIE+++ 
Sbjct: 213 LHAIPSEHYGFQDKEQRFRQRYLDLIMNERSRDVLITRSKIVSYIRNYFEKRDFIEVETP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     +     L+++ +PE   K L+  G  ++      +RN 
Sbjct: 273 MMNAIAGGAT-AKPFVTH---HNEHDMNLFMRVAPELYLKMLVVGGLNRVMEVGRQFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y+A+     LM+   +++    +       +  +       N N 
Sbjct: 329 GIDLTHNPEFTTCEFYQAYADVYDLMETTEDLVSGLVKHVTGGYETVFHTQSGETYNVNW 388

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    + +  A                       L    ++  +  +   T + +  ++
Sbjct: 389 KAPWRRVEMMPALEEACGEKFPPGDQLHTAETNEFLKRVLKKMNVDCSPPQTNARMLDKL 448

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +       +RFE + C  E+ NA  EL DP
Sbjct: 449 VGEFIESTC--INPTFITGHPQMMSPLAKKHRHITGLCERFEAFVCTKEITNAYTELNDP 506

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K++  +E   IDE+F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 507 FDQRMRFEEQANQKEQGDDEAQVIDENFCQSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 566

Query: 341 EVIWTPFSQSNQ 352
           EV+  P  + ++
Sbjct: 567 EVLTFPMMKEDK 578


>gi|302918070|ref|XP_003052579.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733519|gb|EEU46866.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 609

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 152/372 (40%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +  +D   R              R   + R+ + + +R YF E  F+E+++ 
Sbjct: 220 LHALPDDHYGFKDLEQRFRKRYLDLICNEKARNVFVTRSKMITWIRRYFDERDFVEVETP 279

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F+T     +     +Y++ +PE   K L+  G  +++     +RN 
Sbjct: 280 MMNQIAGGAT-AKPFTTH---HNEYDMQMYMRVAPELYLKMLVVGGLNRVYEIGRQFRNE 335

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT +E+Y+A+     LM    +++    +       +  +         N 
Sbjct: 336 GADLTHNPEFTTIEFYQAYADVNDLMDITEDMVSGLVKYLTGGYVTTFHTQSGEKYEVNW 395

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                   +     +              Q     L    ++  +      T + +  ++
Sbjct: 396 EKPWPRYEMIPELEKATGEKFPPGDQLHTQETNDFLRGILKKMKLDCTPPLTNARMIDKL 455

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        + +  +P   S LA  +   P   +RFE + C  E+ NA  EL DP
Sbjct: 456 VGEYIEEKCV--NPSFITGHPQVMSPLAKYHREIPGLCERFEAFVCKKEIANAYTELNDP 513

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   IDE+F   L   +P + G  MG DR+VM +T    I 
Sbjct: 514 FDQRLRFEEQARQKDQGDDEAQLIDENFCTSLEYGLPPTGGWGMGIDRMVMFLTDNYTIR 573

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF + ++
Sbjct: 574 EVLAFPFMKDDK 585


>gi|157151486|ref|YP_001450052.1| lysyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189082972|sp|A8AW92|SYK_STRGC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157076280|gb|ABV10963.1| lysyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 496

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFNRFVTRSKIISEIRRYLDGQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA  V      ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAISVCGDGPINYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    + +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMSFEEAT------ALAKEKNVPLEKHFTEVGHVINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LTQPTFIYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|311256989|ref|XP_003126904.1| PREDICTED: lysyl-tRNA synthetase-like [Sus scrofa]
          Length = 583

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 85/376 (22%), Positives = 153/376 (40%), Gaps = 42/376 (11%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +     F+EI++ 
Sbjct: 210 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDALGFLEIETP 269

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 270 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 325

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 326 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYEI 385

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 386 DFTPPFRKISMVEELEKALGMKLPDTNLFETEETRKILDDICVAKAVECPPPRTTARLLD 445

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E                  S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 446 KLVGEFLE----------------IMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 489

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE F   L   +P + G  MG DR+ M +T +NN
Sbjct: 490 DPVRQRQLFEEQAKAKAAGDDEAMFIDETFCTALEYGLPPTGGWGMGIDRVTMFLTDSNN 549

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 550 IKEVLLFPAMKPEDKK 565


>gi|300871937|ref|YP_003786810.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli
           95/1000]
 gi|300689638|gb|ADK32309.1| lysyl-tRNA-synthetase LysU class II [Brachyspira pilosicoli
           95/1000]
          Length = 510

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 171/367 (46%), Gaps = 30/367 (8%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +     D    YR+R              +KR+ + S++RE  +EN F+E+++ 
Sbjct: 153 LNPLPEKFHGLTDTELRYRQRYVDLIMNDDVKEAFIKRSKMISAIREIMIENNFLEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   LYL+ +PE   K+L+  G +K+F     +RN 
Sbjct: 213 MMHPLIGGA-KAKPFVTH---HNTLDMTLYLRIAPELYLKRLIVGGFDKVFELNRNFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPE 166
                H PEFTM+E Y A+ ++ ++M+    +        N K  S +++   N      
Sbjct: 269 GISTRHNPEFTMMEAYMAYANFHKVMELVEEVFSKVCFKLNGKYTSQYKDYEINFKPPFA 328

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILI 223
            + + +    ++ +D  +   + +   +      A+  G+ +       T  ++   +  
Sbjct: 329 RVPMVDLVKEHSGLDFNSIQSDDEAISK------AKSIGVEIDTSKGKPTKWEVMVAVFE 382

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           EK+E    +   T +  YP   S L+  YP +P  T+R+EL+   +E+ N   EL DPI+
Sbjct: 383 EKVEEK--LIQPTFVINYPKAVSPLSKSYPDNPDITERYELFIGGMEMSNGFSELNDPID 440

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RFE++++ K +  +ET  +D DF+  L   +P + G+ +G DR+ +L     +I + 
Sbjct: 441 QKERFEEQLKAKARGEDETMDMDLDFINALEYGLPPTGGLGIGIDRMAILFLNVPSIRDT 500

Query: 343 IWTPFSQ 349
           I  P  +
Sbjct: 501 ILFPQMR 507


>gi|332359479|gb|EGJ37299.1| lysine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 496

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 154/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA   N     ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAISVNGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A++  + +    T    + +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMS------FEEAVALAKEKKVPLEKHFTEVGHVINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID DF+  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|256384301|gb|ACU78871.1| lysine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385134|gb|ACU79703.1| lysine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296456023|gb|ADH22258.1| lysine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 500

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 161/368 (43%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR                R  I  +L+ +     ++E+++ 
Sbjct: 145 LRPLPDKHAGIQDIEEKYRRRYVDLIMNHDVRKTFQARTKIIRTLQNFLDNKGYMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  + F T     + +   +YL+ + E   K+L+  G E ++     +RN 
Sbjct: 205 ILHSLKGGAS-AKPFITHY---NVLNTDVYLRIATELHLKRLIVGGFEGVYEIGRIFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+E    LM     I R      N   I  + NV  +     +
Sbjct: 261 GMSTRHNPEFTSIELYVAYEDMFFLMDLTEEIFRVCNAAVNSSSIIEYNNVKIDLSKPFK 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
            + + +   +   +D    +              A++  + V  H ++   I +    E 
Sbjct: 321 RLHMVDGIKQVTGVDFWQEMTV------QQALELAKKHKVHVEKHQESVGHIINLFYEEF 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    I   T +  +P   S LA   P+DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 375 VEST--IVEPTFVYGHPKEISPLAKSNPSDPRFTDRFELFILGREYANAFSELNDPIDQY 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++E+ K  +E   +D DF+  L   MP ++GI +G DRLVML+T + +I +V+ 
Sbjct: 433 ERFKAQIEEESKGNDEANDMDIDFIEALEHAMPPTAGIGIGIDRLVMLLTNSESIKDVLL 492

Query: 345 TPFSQSNQ 352
            P  +  +
Sbjct: 493 FPQMKPRE 500


>gi|52842004|ref|YP_095803.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|148359321|ref|YP_001250528.1| lysine tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296107368|ref|YP_003619068.1| lysyl-tRNA synthetase, class II [Legionella pneumophila 2300/99
           Alcoy]
 gi|81377301|sp|Q5ZUL6|SYK_LEGPH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166229810|sp|A5ICT2|SYK_LEGPC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|52629115|gb|AAU27856.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|148281094|gb|ABQ55182.1| lysine tRNA synthetase, heat inducible [Legionella pneumophila str.
           Corby]
 gi|295649269|gb|ADG25116.1| lysyl-tRNA synthetase, class II [Legionella pneumophila 2300/99
           Alcoy]
 gi|307610477|emb|CBX00049.1| hypothetical protein LPW_18041 [Legionella pneumophila 130b]
          Length = 496

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 89/364 (24%), Positives = 149/364 (40%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD-------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D              +   R   L R+ +  + RE+  +N F+E+++ 
Sbjct: 143 LRPLPDKFHGLADQELKYRKRYVDLIANEDSRKTFLIRSHLIKAFREFMDDNHFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 203 MMHPIPGGA-LARPFVTH---HNTLDMTMYLRIAPELYLKRLVVGGFERVYEINRNFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM     +      +V   +   +Q    +     E
Sbjct: 259 GISTRHNPEFTMLEFYQAYADYNDLMNFTEQLFHYLCDKVLATRQIEYQGQVIDFNKPFE 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V EA  +Y        +                  G+     D    +   +  E +
Sbjct: 319 RLSVKEAILKY-----HPDIKAQQLETVEGCRTLLNDLGLPYKETDGLGKLQIILFEETV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 374 EHQ--LFQPTFITEYPTEISPLARRSDTNPEVTDRFEFFIAGREIANGFSELNDAEDQAE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++EK     E    D D++  L   +P ++G  +G DRLVML T + +I +VI  
Sbjct: 432 RFRKQVEEKDAGDLEAMHFDSDYIEALEYGLPPTAGEGIGIDRLVMLFTNSQSIRDVILF 491

Query: 346 PFSQ 349
           P  +
Sbjct: 492 PHLR 495


>gi|303232413|ref|ZP_07319105.1| lysine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481497|gb|EFL44565.1| lysine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 527

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 83/369 (22%), Positives = 145/369 (39%), Gaps = 31/369 (8%)

Query: 2   HQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     +++  YR+R              +KR+ I S +R +  E  ++E+++  
Sbjct: 156 RPLPEKFHGLADKEIRYRQRYVDLIMNPDVRDVFVKRSRIVSLIRRFMEEQHYLEVETPM 215

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G   + + F+T     + +    YL+ + E   K+L+  G +++F     +RN  
Sbjct: 216 MHAILGGA-NAKPFTTHF---NALDCDFYLRIATELPLKRLIVGGMDRVFEIGRQFRNEG 271

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-----RCAAEVANQKIFSFQNVNCNPFS 163
               H PEFT +E Y A+     + K   ++               ++  +Q    +   
Sbjct: 272 MDLTHNPEFTSMEAYCAYSDLAGMKKLTQDMFQRIAREVCGCAEGNEVIDYQGTEVDMRG 331

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               + +A+  +      +          D   L     +  I    D     +   +  
Sbjct: 332 TWRSLPLADIVSEVVGEPVSMD------TDVAHLRKLCDEHEIAWQEDWQAGKLLFELYD 385

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    I   T +  YPA  S L+     DPR T RFEL  C  E  NA  EL DP++
Sbjct: 386 ELGEQT--IVHPTFVCDYPAEVSPLSKRKDDDPRLTDRFELVICGHEYANAFSELNDPVD 443

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q  RF  +++ K    +E    D D++  L   MP   GI  G DR++ML     +I +V
Sbjct: 444 QAQRFADQVRAKGLGDDEAMGYDYDYVRALEYGMPPCGGIGYGIDRMIMLFCNQASIRDV 503

Query: 343 IWTPFSQSN 351
           +  P  +  
Sbjct: 504 LLFPQMKPE 512


>gi|302345761|ref|YP_003814114.1| lysine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149924|gb|ADK96186.1| lysine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 578

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 154/374 (41%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR ++  ++R++F E  
Sbjct: 141 LKPLPVVKYKDGEAYDKFEDPEQRYRQRYVDLVVNEGVKDTFLKRAIVLRTMRKFFDEAG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 201 YTEVETPTLQSIAGGAS-ARPFITHF---NALNVDMYMRIATELYLKRLIVGGFEGVYEI 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     ++       N K          
Sbjct: 257 GKNFRNEGMDRFHNPEFTCMELYVQYKDYNWMMSFTEKLLEKICIEVNGKPEVQVGDKVI 316

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIF 218
            F      + + +A       D         + +  +  +   +  +  +        + 
Sbjct: 317 SFKAPFRRLPILDAIKEKTGFD------LYGKTEEEIRNIAVNELKLEEIDESFGKGKLI 370

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL
Sbjct: 371 DEIFGEFCEGTY--IQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSEL 428

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q  RF ++M+   K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG  
Sbjct: 429 NDPIDQEERFVEQMRLADKGDDEAMIIDQDFLRSLQYGMPPTSGIGIGIDRLVMLMTGKE 488

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  +  
Sbjct: 489 YIQEVLLFPQMKPE 502


>gi|330801430|ref|XP_003288730.1| lysine-tRNA ligase [Dictyostelium purpureum]
 gi|325081206|gb|EGC34730.1| lysine-tRNA ligase [Dictyostelium purpureum]
          Length = 591

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 158/374 (42%), Gaps = 25/374 (6%)

Query: 1   MHQIP--SQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P  +    + +  +R+R              + R+ +   +R+Y     F+E+++ 
Sbjct: 206 LHMLPKPNNQLVDLETRFRQRYLDMICNESVKKNFIIRSKVIQGVRKYLDNLNFVEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F+T     + +   L+++ +PE   K+L+  G ++++     +RN 
Sbjct: 266 MMNMIAGGAA-AKPFTTH---HNALNLDLFMRIAPELYLKQLVVGGMDRVYEIGKQFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +    H PEFT  E+Y A+  Y  +M+    +I+      +  +      +     E E 
Sbjct: 322 DIDHTHNPEFTTCEYYMAYADYNDIMRMTEELIQGIVMDIHNTLKIKYQPDGPTGKEIEI 381

Query: 168 -----ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
                    +       I          +  R  L    +   +  +   T + +  +++
Sbjct: 382 DFSGPWRKIDMIPELEKIIGTIPTPYTSEETRTFLANACKVHKVECSAPQTTARLLDKLV 441

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
            E +E        T +  +P   S L+  +   P  T+RFEL+    ELCNA  EL +P 
Sbjct: 442 GEFLESQC--INPTFIINHPEIMSPLSKYHRTTPGLTERFELFVNTRELCNAYTELNNPF 499

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
            QR RFE++ + K +  +E   IDE F+  L   +P + G  +G DR VML++   NI E
Sbjct: 500 VQRDRFEEQAKAKAQGDDEACGIDEVFVTSLEYGLPPTGGFGLGIDRFVMLMSNTYNIKE 559

Query: 342 VIWTPFSQSNQEEI 355
           VI  P  +  + E+
Sbjct: 560 VILFPAMKPIRNEV 573


>gi|197121548|ref|YP_002133499.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|220916312|ref|YP_002491616.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|238689875|sp|B4UGU5|SYK_ANASK RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|254782468|sp|B8JFW2|SYK_ANAD2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|196171397|gb|ACG72370.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|219954166|gb|ACL64550.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 513

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 100/371 (26%), Positives = 158/371 (42%), Gaps = 24/371 (6%)

Query: 2   HQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R              +KR  I S +R +     ++E+++ +
Sbjct: 145 RPLPEKWHGLTDVEQRYRQRYVDLVVTPGVREAFVKRARIVSGIRRFLDARGYLEVETPT 204

Query: 49  LQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           L           R F T     + +   L L+ + E   K+L+  G ++++     WRN 
Sbjct: 205 LHKPEEAGGAAARPFETH---HNALDLDLKLRIATELHLKRLVVGGLDRVYEIGRIWRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMN-IIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E+Y+A+ ++E LM+     + R A EV    + +FQ    +      
Sbjct: 262 GIDRRHNPEFTSIEFYQAYATHEDLMRLTEELMHRLAVEVTGGPVVTFQGQAIDLTPPFP 321

Query: 167 YITVAEAFARYANI---DLGTTLDNPDQPDRHLLYL--QAQQAGIRVAHDDTWSDIFSRI 221
            +++ E  AR   +   D        +   R             +  A   T  +  +  
Sbjct: 322 RVSMLEVGARALGLSPDDALAGRGLAEALSRAAARENDSEDAWKLEQAAKKTPGEAVALA 381

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
                EP L  +    +  +P   S L+    ADPR   RFEL+A  +EL NA  EL DP
Sbjct: 382 FEIFGEPQLPKDRPAFVVDFPLETSPLSRRRDADPRLVDRFELFAAGMELANAFSELNDP 441

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE +M+ K     E  P DEDF+  L   MP ++G  +G DRL ML T + +I 
Sbjct: 442 ADQRARFEAQMRAKAAGDEEAMPYDEDFVRALEHGMPPTAGEGIGIDRLAMLFTDSASIR 501

Query: 341 EVIWTPFSQSN 351
           +VI  P  +S 
Sbjct: 502 DVILFPLLKSR 512


>gi|312863664|ref|ZP_07723902.1| lysine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322517081|ref|ZP_08069966.1| lysine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311101200|gb|EFQ59405.1| lysine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322124341|gb|EFX95849.1| lysine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 496

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 151/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLSDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDAQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-AKPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +  +M     II+ AA+V       ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFHDIMNLTEGIIQHAAKVVKGDGPINYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            I + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RIHMVDAIKEITGVDFWQDMT------LDEAKAIAAEKNVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +   K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|294650990|ref|ZP_06728330.1| lysine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823091|gb|EFF81954.1| lysine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 508

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 152 LRPLPDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  + F T     + +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MMHVIPGGAS-AKPFVTH---HNALDMELYLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM+   N++   A ++       +     +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMELTENMLEKLAIDILGTTDVPYGEEVYSFKGPFK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ-AGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L    Q     +V        + + +  E 
Sbjct: 328 KISMFD-----AILEHNPDFTPENVNDREFLAKFTQDVLKEKVKPGFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D DF+  L   +P ++G  +G DRLVML   A +I +V+ 
Sbjct: 441 ERFQAQVAEKDAGDDEAMHYDADFIEALEYGLPPTAGEGIGIDRLVMLFANAPSIRDVLL 500

Query: 345 TPFSQ 349
            P  +
Sbjct: 501 FPHMR 505


>gi|327461043|gb|EGF07376.1| lysine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 496

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 155/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA   N     ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    + +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMSFEEAAT------LAKEKKVPLEKHFTEVGHVINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID DF+  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|189210902|ref|XP_001941782.1| lysyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187977875|gb|EDU44501.1| lysyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 601

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 87/369 (23%), Positives = 151/369 (40%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++ +  +D   R              R   + R  I  ++R+Y  +  F+E+ + 
Sbjct: 213 LRMLPTEHFGYKDQEQRHRNRFLDLIMNDSTRNTFITRTKIVKAIRKYLDDRDFLEVQTP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  R F T     + +   LY++ +PE   K+L+  G E+++     +RN 
Sbjct: 273 MMNKIAGGAT-ARPFKT---YHNELDMELYMRIAPELYLKELVVGGLERVYEIGRQFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+  Y  ++     ++    +       +  +       N N 
Sbjct: 329 GIDLTHNPEFTTCEFYMAYADYNDVLNMTEELVSELVKEVTGSYETVYHTQSGEVYNVNW 388

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                 + +  A             +   +     L    ++  +  +   T + +  ++
Sbjct: 389 ARPWRRVEMIPALEEATGEKWPPATELHTEETNKFLKNVLKKVNVDCSEPRTNARMIDKL 448

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +   P   +RFE + C  E+CNA  EL DP
Sbjct: 449 VGEFIEETA--INPTFIIGHPEVMSPLAKYHRDIPGLCERFEAFVCKKEICNAYTELNDP 506

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K    +E   IDE F   L   +P + G  MG DRLVM +T    I 
Sbjct: 507 FDQRLRFEEQANQKAAGDDEAQLIDETFCQSLEYGLPPTGGWGMGIDRLVMFLTDHYTIK 566

Query: 341 EVIWTPFSQ 349
           EV+  PF +
Sbjct: 567 EVLTFPFMK 575


>gi|330939275|ref|XP_003305825.1| hypothetical protein PTT_18775 [Pyrenophora teres f. teres 0-1]
 gi|311316967|gb|EFQ86058.1| hypothetical protein PTT_18775 [Pyrenophora teres f. teres 0-1]
          Length = 601

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 150/369 (40%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++ +  +D   R              R   + R  I  ++R+Y  +  F+E+ + 
Sbjct: 213 LRMLPTEHFGYKDQEQRHRNRFLDLIMNDSTRNTFITRTKIVKAIRKYLDDRDFLEVQTP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  R F T     + +   LY++ +PE   K+L+  G E+++     +RN 
Sbjct: 273 MMNKIAGGAT-ARPFKT---YHNELDMELYMRIAPELYLKELVVGGLERVYEIGRQFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+  Y  ++     ++    +       +  +       N N 
Sbjct: 329 GIDLTHNPEFTTCEFYMAYADYNDVLNMTEELVSELVKEVTGSYETVYHTQSGEVYNVNW 388

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                 + +  A             +         L    ++  +  +   T S +  ++
Sbjct: 389 ARPWRRVEMIPALEEATGEKWPPATELHTAETNEFLKKVLKKVNVDCSEPRTNSRMIDKL 448

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +   P   +RFE + C  E+CNA  EL DP
Sbjct: 449 VGEFIEETA--INPTFIIGHPEVMSPLAKYHRDIPGLCERFEAFVCKKEICNAYTELNDP 506

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K    +E   IDE F   L   +P + G  MG DRLVM +T    I 
Sbjct: 507 FDQRLRFEEQANQKAAGDDEAQLIDETFCQSLEYGLPPTGGWGMGIDRLVMFLTDHYTIK 566

Query: 341 EVIWTPFSQ 349
           EV+  PF +
Sbjct: 567 EVLTFPFMK 575


>gi|156060031|ref|XP_001595938.1| hypothetical protein SS1G_02152 [Sclerotinia sclerotiorum 1980]
 gi|154699562|gb|EDN99300.1| hypothetical protein SS1G_02152 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 610

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 83/368 (22%), Positives = 152/368 (41%), Gaps = 26/368 (7%)

Query: 2   HQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
            Q+P + +  +D   R              R  L  R+ +   +R YF +  F E+++  
Sbjct: 221 QQLPDEYYGFKDHEKRHRQRYLDLIMNDSSRKVLKTRSKMVRYIRNYFDDRDFDEVETPM 280

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G  T  + F T     + +   ++++ +PE   K L+  G ++++     +RN  
Sbjct: 281 MNSIAGGAT-AKPFKTH---HNDLNMDMFMRIAPELYLKMLVVGGMDRVYEMGRQFRNEG 336

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNPF 162
               H PEFT  E+Y A+      M     ++    +       +  +         N  
Sbjct: 337 IDLTHNPEFTTCEFYMAYADVYDTMDMTEELVSGLVKHITGGTTTKFHTQHGEEYEVNWA 396

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
           +  + I +  A             +  +           ++  +  +   T + +  +++
Sbjct: 397 APWKRIEMIPALEEATGEKFPPADELHNDESNEFFKRVLKKMNVECSPPLTNARMLDKLV 456

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
            E IE        T +  +P   S LA  + + P   +R+E + C  E+ NA  EL DP 
Sbjct: 457 GEFIEETC--INPTFITEHPKMMSPLAKHHRSKPGLCERYEAFVCKKEIVNAYTELNDPF 514

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           EQR RFE++ ++K +  +E   IDE+F   L   +P ++G  MG DRLVM +T   +I E
Sbjct: 515 EQRLRFEEQARQKDQGDDEAQMIDENFCRALEFGLPPTAGWGMGIDRLVMFLTDNYSIKE 574

Query: 342 VIWTPFSQ 349
           V+  PF +
Sbjct: 575 VLTFPFMK 582


>gi|325687234|gb|EGD29256.1| lysine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 496

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 155/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA   N     ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAVSVNGDGPINYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +   +          AQ+  + +    T    + +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMSFEEAA------ALAQEKKVPLEKHFTEVGHVINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID DF+  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|226951466|ref|ZP_03821930.1| lysyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226837759|gb|EEH70142.1| lysyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 508

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 152 LRPLPDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  + F T     + +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MMHVIPGGAS-AKPFVTH---HNALDMELYLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM+   N++   A ++       +     +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMELTENMLEKLAIDILGTTDVPYGEEVYSFKGPFK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ-AGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L    Q     +V        + + +  E 
Sbjct: 328 KISMFD-----AILEHNPDFTPENVNDREFLAKFTQDVLKEKVKPGFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D DF+  L   +P ++G  +G DRLVML   A +I +V+ 
Sbjct: 441 ERFQAQVAEKDAGDDEAMHYDADFIEALEYGLPPTAGEGIGIDRLVMLFANAPSIRDVLL 500

Query: 345 TPFSQ 349
            P  +
Sbjct: 501 FPHMR 505


>gi|299138524|ref|ZP_07031703.1| lysyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298599770|gb|EFI55929.1| lysyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 596

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 165/371 (44%), Gaps = 34/371 (9%)

Query: 13  DFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
                 R   +KR  I  +LR +F    ++E+++  L    G     R F T     + +
Sbjct: 218 QTRAAAREVFVKRAAILRALRNFFDTRGYLEVETPMLHTIAGGAA-ARPFKTH---HNAL 273

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
             PL ++ +PE   K+L+  G ++++     +RN      H PEFTMLE+Y+A+ +Y  L
Sbjct: 274 DIPLSMRIAPELYLKRLVVGGFDRVYEINRNFRNEGVSTQHNPEFTMLEFYQAYANYHDL 333

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI---------DLG 183
           M     +I   A+  N    +  N       +   +++ EA  R+            D  
Sbjct: 334 MDLTQELITTVAKGVNGTTITNFNGVEIDLGKWTKLSMREAILRFWPENILAKPEVADFA 393

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHD------------------DTWSDIFSRILIEK 225
           +     +  DR +  L  Q++G   AH                     +    + +    
Sbjct: 394 SANAMLEWLDRAIANLPLQESGSIYAHPSVEVAKTLLHCREAIQSGTPYGKCIAELFEIV 453

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E +  +   TI+  +P   S L+ + P +P + +RFE Y    E+ NA  EL DP +QR
Sbjct: 454 AEEH--LIQPTIIYDFPLAVSPLSKVKPDEPDWVERFEFYIGGFEVGNAFSELNDPDDQR 511

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE ++ E+++  +E + +DED++  L   +P + G  +G DRL ML+TG+ +I +VI 
Sbjct: 512 ARFEAQLTERERGDDEAHQMDEDYVRALGYGLPPTGGEGIGIDRLTMLLTGSRSIRDVIL 571

Query: 345 TPFSQSNQEEI 355
            P  +   + +
Sbjct: 572 FPLMRPQAKSV 582


>gi|255712337|ref|XP_002552451.1| KLTH0C05192p [Lachancea thermotolerans]
 gi|238933830|emb|CAR22013.1| KLTH0C05192p [Lachancea thermotolerans]
          Length = 591

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 153/376 (40%), Gaps = 30/376 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R           P  + R+ I S +R +  E  FIE+++ 
Sbjct: 214 LHILPADHFGFKDQETRYRKRYLDLIMNKDARPRFITRSKIISFIRRFLDERNFIEVETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++++ +PE   K+L+  G E+++     +RN 
Sbjct: 274 MMNVIAGGAT-AKPFVTH---HNDLNMDMFMRIAPELFLKELVVGGMERVYEIGRQFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------N 158
                H PEFT  E+Y+A+     LM     +     +          +           
Sbjct: 330 GIDMTHNPEFTTCEFYQAYADVYDLMDMTEMLFSEMVKEITGSYVIKYHPDPRDPTKELE 389

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     + I + E      N+              + L    ++  +      T + + 
Sbjct: 390 LNFSRPWKRINMIEELENRLNVKFPPGDQLHTAETGNFLKKVLKENNLECPPPLTNARML 449

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 450 DKLVG---ELEDTCINPTFIFGHPQMMSPLAKKSRDVPGLCERFEVFVATKEICNAYTEL 506

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE++ ++K +  +E   IDE F   L   +P + G   G DRL M +T +N
Sbjct: 507 NDPFDQRARFEEQARQKDQGDDEAQLIDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSN 566

Query: 338 NINEVIWTPFSQSNQE 353
            I EV+  P  + + +
Sbjct: 567 TIREVLLFPTLKPDAQ 582


>gi|324994794|gb|EGC26707.1| lysine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 496

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 155/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA   N     ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +   +          AQ+  + +    T    + +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMSFEEAA------ALAQEKKVPLEKHFTEVGHVINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID DF+  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|312866389|ref|ZP_07726607.1| lysine--tRNA ligase [Streptococcus downei F0415]
 gi|311098083|gb|EFQ56309.1| lysine--tRNA ligase [Streptococcus downei F0415]
          Length = 496

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 150/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETKYRKRYLDLITNRDSFDRFVTRSKIISEIRRYLDGLGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-AKPFVTH---HNAQDMDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +  +M     II+ A +         +Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFNDIMDLTEGIIQHATKAVKGDGPVIYQETEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +              AQ+  + +    T    + +    E 
Sbjct: 320 RVHMVDAIKEVTGVDFWPQMS------LDEAKALAQEKNVPLEKHFTSVGHVINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+  N E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVEVSPLAKKNADDPRFTDRFELFIMNHEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +   K+   +E   ID D++  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 ERFKAQAAAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|290580761|ref|YP_003485153.1| lysyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254997660|dbj|BAH88261.1| lysyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 496

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 150/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFITRSKIISEIRRYLDGLGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F+T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-AKPFTTH---HNAQDMDMVLRIATELHLKRLIVGGMERVYEMGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +E +M     I++ AA         ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAVKGDGPITYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
              + +       +D    +   +          AQ+  + +    T    I +    E 
Sbjct: 320 RAHIVDLIKEVTGVDFWKEMTLAE------AQALAQEKNVPLEKHYTSVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +     +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPIFVYGHPVEVSPLAKKNADDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +   K+   +E   ID D++  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 ERFKAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|228478164|ref|ZP_04062772.1| lysyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228249843|gb|EEK09113.1| lysyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 496

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 150/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLSDVETIYRKRYLDLISNRDSFDRFVTRSKIISEIRRYLDAQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-AKPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +  +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            I + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RIHMVDAIKEITGVDFWQDMT------LDEAKAIAAEKNVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +   K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|73748416|ref|YP_307655.1| lysyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|123759759|sp|Q3ZWX9|SYK_DEHSC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|73660132|emb|CAI82739.1| lysyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 498

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 177/369 (47%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              L R+ + S +R +     F+E+++ 
Sbjct: 137 LLPLPEKWHGLQDVEKRYRQRYLDLISNADARQTFLTRSRVISVIRAFMNAKGFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T       +    Y++ + E   K+L+  G ++++     +RN 
Sbjct: 197 VLQPEAGGA-LARPFITH---HQALNCDFYMRIALELHLKRLIVGGFDRVYEIGRIFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+ +Y+ +M     ++    +         F ++  +      
Sbjct: 253 GISTRHNPEFTMMESYQAYANYKDVMDFLEEMVSSVVKEISGGYTLPFGDITLDFTPPWP 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA ID        D P +  L  +  +  ++V     W  +   ++ E +
Sbjct: 313 RLTMRDAVKQYAGID------FFDFPTKETLAAEMTRRKLKVDPAKDWGKLVDELVGEFV 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP+  +   T L  +P   S LA   P DPR T+RFE    N+E+ NA  EL DP+EQR 
Sbjct: 367 EPH--LVQPTFLTDHPVAMSPLAKQKPEDPRLTERFEAICANMEIANAFSELNDPVEQRA 424

Query: 287 RFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           RF+++++++ ++  +E+  +DEDFLA L   MP + G+ +G DRLVML T  ++I EVI 
Sbjct: 425 RFKEQLEKRSQLRTDESESVDEDFLAALAYGMPPTGGLGVGIDRLVMLFTNHDSIREVIL 484

Query: 345 TPFSQSNQE 353
            P  +  ++
Sbjct: 485 FPALKDRED 493


>gi|221481971|gb|EEE20337.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
 gi|221505048|gb|EEE30702.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 658

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 86/372 (23%), Positives = 149/372 (40%), Gaps = 28/372 (7%)

Query: 1   MHQIPSQ-PWWNRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P +    + +  +R            R   L R+ I + LR +  +  F+E+++  
Sbjct: 270 LHMLPERNSLKDFEVRFRHRYLDLMVNDETRKTFLIRSRIVNYLRRFLEDRGFVEVETPM 329

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     R F T     + +   LY++ +PE   K L+  G +++F     +RN  
Sbjct: 330 MNVIAGGAA-ARPFKTH---HNDLDMDLYMRIAPELFLKMLIVGGMDRVFEIGKNFRNEG 385

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------CN 160
               H PEFT  E+Y A+  Y  LM     ++       +       + +         +
Sbjct: 386 IDMTHNPEFTACEFYWAYADYNDLMNFTEELVSSMVMALHGTYQIQFHPDGPGSEPVTLD 445

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  +++ E   + A + L   LD  +      +     +  + +    T + +   
Sbjct: 446 FTPPFARLSMVEEIEKQAGVTLPRPLDGDECI--AFMKELLIKNKVDLPQPATSAKLLDA 503

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +  E +E          +  +P   S LA  + + P  T+RFEL+    ELCNA  EL D
Sbjct: 504 LCGEYVECQARTKPV-FITEHPQIMSPLAKWHRSKPELTERFELFLMGKELCNAYTELND 562

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P+ QR  F  + + K    +E   IDE F   L   +P + G  +G DRL M ++  N I
Sbjct: 563 PVRQRECFMDQAKAKAAGDDEATCIDEVFCTALEYGLPPTGGWGIGIDRLTMFLSDHNTI 622

Query: 340 NEVIWTPFSQSN 351
            EVI  P  +  
Sbjct: 623 KEVILFPAMRPQ 634


>gi|147669196|ref|YP_001214014.1| lysyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|289432464|ref|YP_003462337.1| lysyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|189082959|sp|A5FRN5|SYK_DEHSB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|146270144|gb|ABQ17136.1| lysyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|288946184|gb|ADC73881.1| lysyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 498

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 177/369 (47%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              L R+ + S +R +     F+E+++ 
Sbjct: 137 LLPLPEKWHGLQDVEKRYRQRYLDLISNADARQTFLTRSRVISVIRAFMNAKGFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T       +    Y++ + E   K+L+  G ++++     +RN 
Sbjct: 197 VLQPEAGGA-LARPFITH---HQALNCDFYMRIALELHLKRLIVGGFDRVYEIGRIFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+ +Y+ +M     ++    +         F ++  +      
Sbjct: 253 GISTRHNPEFTMMESYQAYANYKDVMDFLEEMVSSVVKEISGGYTLPFGDITLDFTPPWP 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA ID        D P +  L  +  +  ++V     W  +   ++ E +
Sbjct: 313 RLTMRDAVKQYAGID------FFDFPTKETLAAEMTRRKLKVDPAKDWGKLVDELVGEFV 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP+  +   T L  +P   S LA   P DPR T+RFE    N+E+ NA  EL DP+EQR 
Sbjct: 367 EPH--LVQPTFLTDHPVAMSPLAKQKPEDPRLTERFEAICANMEIANAFSELNDPVEQRA 424

Query: 287 RFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           RF+++++++ ++  +E+  +DEDFLA L   MP + G+ +G DRLVML T  ++I EVI 
Sbjct: 425 RFKEQLEKRSQLRTDESESVDEDFLAALAYGMPPTGGLGVGIDRLVMLFTNHDSIREVIL 484

Query: 345 TPFSQSNQE 353
            P  +  ++
Sbjct: 485 FPALKDRED 493


>gi|257460079|ref|ZP_05625183.1| lysyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442520|gb|EEV17659.1| lysyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 497

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 84/363 (23%), Positives = 156/363 (42%), Gaps = 27/363 (7%)

Query: 3   QIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     + +  YR+R              +KR++I S +R +F ++ F+E+++  +
Sbjct: 141 PLPEKFHGLVDIEMRYRQRYLDMIMNPEVREDFIKRSIIVSEIRSFFEKHGFLEVETPMM 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 201 HPIAGGA-NAKPFITH---HNALDVDRYLRIAPELYLKRLVVGGMEAVFEINRNFRNEGM 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A   Y   M     + +   +     +I ++     +       I
Sbjct: 257 DLTHNPEFTSIEFYWAWHDYNDAMNLTEELFKALFKRLRLGEILTYDEREIDFSKPFARI 316

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +A  +   I+           DR  +  + ++    V        + S +    +E 
Sbjct: 317 KYLDALTQIGGIEPQIVN------DREKIIAKLKEDKFEVNEKLDLGHLQSELFDNYVEA 370

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L+     +P+  +RFELY    EL NA +EL DP++Q  RF
Sbjct: 371 K--LINPTFIVDFPISISPLSRRSDENPQIAERFELYIAGKELANAFNELNDPLDQYARF 428

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + ++  K    +E + +DED++  L   MP ++G  +G DRL M++    +I +VI  P 
Sbjct: 429 KAQIDAKNAGDDEAHEMDEDYVRALSYAMPPTTGWGLGIDRLAMILLNKKSIRDVILFPA 488

Query: 348 SQS 350
            + 
Sbjct: 489 MRP 491


>gi|21672688|ref|NP_660755.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009350|sp|Q8K9C5|SYK_BUCAP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21623328|gb|AAM67966.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 503

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 170/368 (46%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWWN--RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +      ++  YR+R                R+ I   +R + +EN F+E+++ 
Sbjct: 147 LRPLPDKFHGLSNQEKRYRKRYLDLISNNQLFNIFKNRSKIIRFIRNFMIENNFLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + R F T     + I + +YL+ +PE   K+L+  G E+IF     +RN 
Sbjct: 207 MLHNIPGGA-NARPFIT---YHNEINEEMYLRIAPELYLKQLIVGGFERIFELNRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+ +YE +M    N+++   + +  +    +     N     +
Sbjct: 263 GVSARHNPEFTMMEAYIAYSNYEDMMNFTENLLKNIIKSICGKSEIKYNKYYLNFNIPFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E+  ++      + +   D  +   +   A   GI +  +     I + I  + +
Sbjct: 323 KLTMKESILQF-----NSNICLSDLKNLQKIKKIANNIGIEIKDNWNIGYIENEIFEKTV 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   T +  YP   S LA     +   T RFEL+    E+ N   EL D  +Q++
Sbjct: 378 EKN--LIQPTFITEYPVEVSPLARRNDFNSNVTDRFELFIAGYEIGNGFSELNDSEDQKN 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +M+  +K  N+    DE+++  L   +P +SG+ +G DRL+M++T   +I +VI  
Sbjct: 436 RFLNQMKIAEKEKNKDMLYDENYIEALKYGLPPTSGLGIGIDRLIMILTNQISIRDVILF 495

Query: 346 PFSQSNQE 353
           P  +S ++
Sbjct: 496 PTLRSFKK 503


>gi|288803723|ref|ZP_06409152.1| lysine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288333812|gb|EFC72258.1| lysine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 578

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 154/374 (41%), Gaps = 35/374 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              LKR ++  ++R++F E  
Sbjct: 141 LKPLPVVKYKDGEAYDKFEDPEQRYRQRYVDLVVNEGVKDTFLKRAIVLRTMRKFFDEAG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 201 YTEVETPTLQSIAGGAS-ARPFITHF---NALNVDMYMRIATELYLKRLIVGGFEGVYEI 256

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     ++       N K          
Sbjct: 257 GKNFRNEGMDRFHNPEFTCMELYVQYKDYNWMMSFTEKLLEKICIEVNGKPEVQVGDKVI 316

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIF 218
            F      + + +A       D         + +  +  +   +  +  +        + 
Sbjct: 317 SFKAPFRRLPILDAIKEKTGFD------LYGKTEEEIRNIAVNELKLEEIDESFGKGKLI 370

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL
Sbjct: 371 DEIFGEFCEGTY--IQPTFITDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSEL 428

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q  RF ++M+   K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG  
Sbjct: 429 NDPIDQEERFIEQMRLADKGDDEAMIIDQDFLRSLQYGMPPTSGIGIGIDRLVMLMTGKE 488

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  +  
Sbjct: 489 YIQEVLLFPQMKPE 502


>gi|125718339|ref|YP_001035472.1| lysyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|323351244|ref|ZP_08086900.1| lysine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|166230594|sp|A3CP17|SYK_STRSV RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|125498256|gb|ABN44922.1| Lysyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
 gi|322122468|gb|EFX94179.1| lysine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|324991525|gb|EGC23458.1| lysine--tRNA ligase [Streptococcus sanguinis SK353]
 gi|324993887|gb|EGC25806.1| lysine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|325690836|gb|EGD32837.1| lysine--tRNA ligase [Streptococcus sanguinis SK115]
 gi|325696096|gb|EGD37987.1| lysine--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327463149|gb|EGF09470.1| lysine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327474760|gb|EGF20165.1| lysine--tRNA ligase [Streptococcus sanguinis SK408]
 gi|327489865|gb|EGF21654.1| lysine--tRNA ligase [Streptococcus sanguinis SK1058]
 gi|328946786|gb|EGG40924.1| lysine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 496

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 155/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA   N     ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +   +          AQ+  + +    T    + +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMSFEEAA------ALAQEKKVPLEKHFTEVGHVINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID DF+  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|169351684|ref|ZP_02868622.1| hypothetical protein CLOSPI_02465 [Clostridium spiroforme DSM 1552]
 gi|169291906|gb|EDS74039.1| hypothetical protein CLOSPI_02465 [Clostridium spiroforme DSM 1552]
          Length = 496

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/368 (27%), Positives = 160/368 (43%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YRRR   L            R  I  S++ Y     ++E+++ 
Sbjct: 141 LRPLPEKYHGLTDVEERYRRRYVDLIMNEDARKIAFTRPKIIRSIQHYLDNKGYVEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     + +    YL+ + E S K+L+  G + ++     +RN 
Sbjct: 201 VLNPILGGAS-ARPFVTH---HNTLDVNFYLRIATELSLKRLIVGGMDAVYEIGRLFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A    E +M     II  AA  V       ++    +     +
Sbjct: 257 GMDRTHNPEFTTIEVYKAFSDLEGMMDLTEGIISNAANEVCGTYEIEYKGHKISLAPGFK 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ +A      ID    +   D          A++  I +     +  I +    + +
Sbjct: 317 RISMTDAIKEKTGIDFAGDMTFED------AKKLAEEHHIEIEPHYEYGHIINEFFEKYV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA   P DPRFT+RFEL+ C  E  NA +EL DP +Q  
Sbjct: 371 EET--IVDPTFVYGHPVEISPLARKNPEDPRFTQRFELFICGNEYANAFNELNDPDDQYE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++EK+   +E   +D D++  L   +P + G+ MG DRLVML+TG  +I EVI  
Sbjct: 429 RFANQLKEKELGNDEANEMDLDYVEALEYGLPPTGGMGMGIDRLVMLLTGQESIQEVILF 488

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 489 PQMKPRGK 496


>gi|121996858|ref|YP_001001645.1| lysyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|121588263|gb|ABM60843.1| lysyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 495

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + +++R +  E  F+E+++ 
Sbjct: 140 LRPLPEKWHGLNDHEIRYRQRYLDLIVNEESQRVFALRTRVLAAMRRFLDERGFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + + + LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 200 MMQPIPGGAA-ARPFVTH---HNALGRDLYLRIAPELYLKRLVVGGFERVYEVNRNFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A   Y  LM     ++R  A +       ++Q    +  S  E
Sbjct: 256 GVSTRHNPEFTMLEFYQAFADYRDLMDLTEEMLRHLAEQALGSGQVTWQGETYDFASSFE 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ EA  R+      + L   D  +R      AQ  GI V   D    I + +  E  
Sbjct: 316 RISLIEAVLRF-----NSDLGIEDLTERERAAQAAQARGIEVPPGDGLGKIQAALFEETA 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   ++    +  YP   S LA     DP +T+RFEL     E+ N   EL D  +Q  
Sbjct: 371 EPR--LHGPVFVTDYPKEVSPLARPLDDDPCYTERFELIVGGREIANGFSELNDAEDQAA 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +  E+     E    D D++  L   +P ++G  +G DRLVML+   ++I +V+  
Sbjct: 429 RFRAQAAERDAGDQEAMHYDADYIRALEYGLPPTAGEGIGIDRLVMLLADCDSIRDVLLF 488

Query: 346 PFSQSN 351
           P  +  
Sbjct: 489 PAMRPE 494


>gi|24379232|ref|NP_721187.1| lysyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|39932192|sp|Q8DUW8|SYK_STRMU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|24377146|gb|AAN58493.1|AE014919_1 lysyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 496

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 150/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESLERFITRSKIISEIRRYLDGLGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F+T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-AKPFTTH---HNAQDMDMVLRIATELHLKRLIVGGMERVYEMGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +E +M     I++ AA         ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFEDIMDLTEGIVQHAATAVKGDGPITYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
              + +       +D    +   +          AQ+  + +    T    I +    E 
Sbjct: 320 RAHIVDLIKEVTGVDFWKEMTLAE------AQALAQEKNVPLEKHYTSVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +     +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPIFVYGHPVEVSPLAKKNADDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +   K+   +E   ID D++  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 ERFKAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|237837009|ref|XP_002367802.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211965466|gb|EEB00662.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 658

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 86/372 (23%), Positives = 149/372 (40%), Gaps = 28/372 (7%)

Query: 1   MHQIPSQ-PWWNRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P +    + +  +R            R   L R+ I + LR +  +  F+E+++  
Sbjct: 270 LHMLPERNSLKDFEVRFRHRYLDLMVNDETRKTFLIRSRIVNYLRRFLEDRGFVEVETPM 329

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     R F T     + +   LY++ +PE   K L+  G +++F     +RN  
Sbjct: 330 MNVIAGGAA-ARPFKTH---HNDLDMDLYMRIAPELFLKMLIVGGMDRVFEIGKNFRNEG 385

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------CN 160
               H PEFT  E+Y A+  Y  LM     ++       +       + +         +
Sbjct: 386 IDMTHNPEFTACEFYWAYADYNDLMNFTEELVSSMVMALHGTYQIQFHPDGPGSEPVTLD 445

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  +++ E   + A + L   LD  +      +     +  + +    T + +   
Sbjct: 446 FTPPFARLSMVEEIEKQAGVTLPRPLDGDECI--AFMKELLIKNKVDLPQPATSAKLLDA 503

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +  E +E          +  +P   S LA  + + P  T+RFEL+    ELCNA  EL D
Sbjct: 504 LCGEYVECQARTKPV-FITEHPQIMSPLAKWHRSKPELTERFELFLMGKELCNAYTELND 562

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P+ QR  F  + + K    +E   IDE F   L   +P + G  +G DRL M ++  N I
Sbjct: 563 PVRQRECFMDQAKAKAAGDDEATCIDEVFCTALEYGLPPTGGWGIGIDRLTMFLSDHNTI 622

Query: 340 NEVIWTPFSQSN 351
            EVI  P  +  
Sbjct: 623 KEVILFPAMRPQ 634


>gi|116202689|ref|XP_001227156.1| hypothetical protein CHGG_09229 [Chaetomium globosum CBS 148.51]
 gi|88177747|gb|EAQ85215.1| hypothetical protein CHGG_09229 [Chaetomium globosum CBS 148.51]
          Length = 618

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 85/372 (22%), Positives = 159/372 (42%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQ--PWWNRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +PS   P+ + +   R            R  L +R+     +REY  E +FIE+++ 
Sbjct: 229 LHMLPSVRFPFSDGEQRARMRYLDMLWNDKSREVLWQRSRAVRYIREYLHERRFIEVETP 288

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T +  F+T     + +   +Y++ +PE   KK++     K+F     +RN 
Sbjct: 289 MMHAIAGGATAL-PFTTH---HNDLDIDMYMRVAPELFLKKMIVGQFGKVFEIGKNFRNE 344

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF------QNVNCNP 161
                H PEFT  E+Y A+     LM+   +++    +       +       +    N 
Sbjct: 345 GIDLTHNPEFTTCEFYWAYADMYDLMELTEDLVSGLVKQLTGSYKTTFTTQHGETYEVNW 404

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    +++     +        + +   +     L    ++ G+  A   T + +  ++
Sbjct: 405 EAPWRRVSMIPELEKATGETFPPSEELHTEETNQFLQKVCKKMGVECAPPLTNARMIDKL 464

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E IE        + +  +P   S LA  + +     +RFE + C  E+ NA  EL +P
Sbjct: 465 TGEFIENTCV--NPSFIIEHPQVMSPLAKYHRSKKGLCERFEAFVCKKEIANAYTELNNP 522

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   +DE FL  L   +P + G  +G DRL M +T   +I 
Sbjct: 523 FDQRLRFEEQARQKDQGDDEAQLVDESFLNALEYGLPPTGGWGLGIDRLTMFITNNYSIR 582

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF +  +
Sbjct: 583 EVLAFPFLREEK 594


>gi|289619755|emb|CBI54038.1| unnamed protein product [Sordaria macrospora]
          Length = 618

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 155/372 (41%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQ--PWWNRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +PS   P+ + +   R            R  L +R+ +   +R++F E +FIE+++ 
Sbjct: 228 LHMLPSVRYPFADAEQRARMRYLDMLWNDRSRETLWQRSRMVRYIRDFFHERRFIEVETP 287

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T +  F T     + +   ++++ +PE   KK++     K+F     +RN 
Sbjct: 288 MMHAIAGGATAL-PFVTH---HNDLDMDMFMRVAPELFLKKMIVGQFGKVFEMGKNFRNE 343

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF------QNVNCNP 161
                H PEFT +E+Y A+     LM     ++    +       +       +  + N 
Sbjct: 344 GIDLTHNPEFTSIEFYWAYADVYDLMSITEELVSSLVKELTGSYKTKFTNQHGETYDVNW 403

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    + +  A                       L    ++ G+      T + +  ++
Sbjct: 404 EAPWRRVEMIPALEEATGEKFPPYDQLHTDETNAFLQKVCKKMGVECPPPLTNARMIDKL 463

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E IE        T +  +P   S LA  + +     +RFE + C  E+ NA  EL +P
Sbjct: 464 TGEFIEETCV--NPTFILEHPQMMSPLAKYHRSKNGLCERFEAFVCKKEIANAYTELNNP 521

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   +DE FL  L   +P + G  +G DRL M +T   +I 
Sbjct: 522 FDQRLRFEEQARQKDQGDDEAQLVDESFLNALEYGLPPTGGWGLGIDRLAMFLTDNYSIR 581

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF +  +
Sbjct: 582 EVLAFPFLREEK 593


>gi|288924875|ref|ZP_06418812.1| lysine--tRNA ligase [Prevotella buccae D17]
 gi|288338662|gb|EFC77011.1| lysine--tRNA ligase [Prevotella buccae D17]
          Length = 584

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 92/376 (24%), Positives = 154/376 (40%), Gaps = 35/376 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +   R+R              LKR  +  ++R +F E  
Sbjct: 142 LKPLPVVKYKDGVAYDKFDDPEMRARQRYVDLVVNEGVKDTFLKRATVLRTMRRFFDEAG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPTLQSIAGGAS-ARPFITHF---NALNVDMYMRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     ++       N         N  
Sbjct: 258 GKNFRNEGMDKYHNPEFTCMELYVQYKDYNWMMAFTERLLETICTAVNGTTEVKNGDNVI 317

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIF 218
            F      + + EA       DL       ++ +  +  +  +   +  +        + 
Sbjct: 318 SFKAPFRRLPILEAIKEKTGFDLS------ERSEEEIRKIATEDLKMETIDESFGKGKLI 371

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL
Sbjct: 372 DEIFGEFCE--GSFIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSEL 429

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q  RF+++MQ   K  +E   ID+DFL  L   MP +SGI +G DRL ML+ G  
Sbjct: 430 NDPIDQEERFKEQMQLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLCMLMIGKE 489

Query: 338 NINEVIWTPFSQSNQE 353
           NI E++  P  +   +
Sbjct: 490 NIQEIMLFPQMKPEAK 505


>gi|312278089|gb|ADQ62746.1| Lysyl-tRNA synthetase [Streptococcus thermophilus ND03]
          Length = 496

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 150/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLSDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDAQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-AKPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +  +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D        D        + A++      H      I +    E +
Sbjct: 320 RIHMVDAIKEITGVDFWQ-----DMTLEEAKVIAAEKNVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +   K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFESQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|331703080|ref|YP_004399767.1| Lysine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801635|emb|CBW53788.1| Lysine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 500

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 160/368 (43%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR                R  I  +L+ +     ++E+++ 
Sbjct: 145 LRPLPDKHAGIQDIEEKYRRRYVDLIMNHDVRKTFQARTKIIRTLQNFLDNKGYMEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  + F T     + +   +YL+ + E   K+L+  G E ++     +RN 
Sbjct: 205 ILHSLKGGAS-AKPFITHY---NVLNTDVYLRIATELHLKRLIVGGFEGVYEIGRIFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+E    LM     I R      N   I  + NV  +     +
Sbjct: 261 GMSTRHNPEFTSIELYVAYEDMFFLMDLTEEIFRVCNAAVNSSSIIEYNNVKIDLSKPFK 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
            + + +   +   +D    +              A++  + V  H ++   I +    E 
Sbjct: 321 RLHMVDGIKQVTGVDFWQEMTV------QQALELAKKHKVHVEKHQESVGHIINLFYEEF 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    I   T +  +P   S LA   P+DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 375 VEST--IVEPTFVYGHPKEISPLAKSNPSDPRFTDRFELFILGREYANAFSELNDPIDQY 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++E+ K  +E   +D DF+  L   MP ++GI +G DRLVM +T + +I +V+ 
Sbjct: 433 ERFKAQIEEESKGNDEANDMDIDFIEALEHAMPPTAGIGIGIDRLVMFLTNSESIKDVLL 492

Query: 345 TPFSQSNQ 352
            P  +  +
Sbjct: 493 FPQMKPRE 500


>gi|325694881|gb|EGD36786.1| lysine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 496

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 154/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA   N     ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAVSVNGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              AQ+  + +    T    + +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMS------FEEAVALAQEKKVPLEKHFTEVGHVINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID DF+  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLVMLLTDVTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|224541993|ref|ZP_03682532.1| hypothetical protein CATMIT_01166 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525050|gb|EEF94155.1| hypothetical protein CATMIT_01166 [Catenibacterium mitsuokai DSM
           15897]
          Length = 494

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 160/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    +RRR   L            R  I  S++ Y  +  + E+++ 
Sbjct: 141 LRPLPEKFHGLTDTEERFRRRYVDLIMNDEARKVAFMRPKIVRSIQHYLDDKGYTEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + + K  YL+ + E + K+L+  G + ++     +RN 
Sbjct: 201 IMNSILGGAA-AKPFITHF---NALDKDFYLRIATELNLKRLIVGGMDAVYEIGRLFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPE 166
                H PEFT +E Y+A    E +M     II  AA   N      ++  + +     +
Sbjct: 257 GMDRTHNPEFTTIEVYKAFSDLEGMMDLTEGIIANAAMTVNGTYDVEYKGHSISLAPGFK 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ +A      +D G      +Q         A++ GI V     +  I +    + +
Sbjct: 317 RISMVDAIKEKTGVDFG------EQKTFEEAKKLAEEHGIEVEPHFAYGHIVNAFFEKYV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT+RFEL+ C  E  NA  EL DP +Q  
Sbjct: 371 EET--IVEPTFVYGHPIEISPLAKKNLQDPRFTQRFELFICGNEYANAFTELNDPDDQYE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++EK+   +E   +D D++  L   +P + G+ MG DRLVML+TG   I EVI  
Sbjct: 429 RFANQLKEKELGNDEANEMDMDYVEALEYGLPPTGGMGMGIDRLVMLLTGQETIREVILF 488

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 489 PHMKNK 494


>gi|312880305|ref|ZP_07740105.1| lysyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783596|gb|EFQ23994.1| lysyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 503

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 85/365 (23%), Positives = 152/365 (41%), Gaps = 25/365 (6%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               KR  I  + R     +  +E+ + 
Sbjct: 149 LRPLPEKWHGLKDQEVRYRQRYVDLIANPEVRDTFRKRTRIIQTFRRVLEAHDTLEVGTP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +  P+YL+ + E   K+L+     +++     +RN 
Sbjct: 209 ILSPLAGGA-NARPFVT---FHNALGIPMYLRIATELYLKRLIVGMFGRVYEIGPNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y ++ +YE +M  C  I+   A+    +  ++Q    +       
Sbjct: 265 GIDLKHNPEFTAMEVYWSYANYEDMMDLCEEILVACADEVGSRTVTYQGTEISFEPPFRR 324

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            ++ +    +  ID     D               +    +   +T   +        +E
Sbjct: 325 ASMMDLVKEHTGIDFDALSDQ-----EARDLALKNKVVSELKGYETKYHLLPEFFDAYVE 379

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S L+    A+P  T RFEL+    E+ NA  EL DP++QR R
Sbjct: 380 DK--LIQPTFVMGHPTVISPLSKRNAANPDITDRFELFINGSEVANAFSELNDPLDQRER 437

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++++K+    E +  DEDF+  L   +P + G+ +G DRLVML+T + +I +VI  P
Sbjct: 438 FLDQVKQKEAGDEEAHVFDEDFVNALEYGLPPTGGMGIGIDRLVMLLTDSRSIRDVILFP 497

Query: 347 FSQSN 351
             +  
Sbjct: 498 TMRPR 502


>gi|150951370|ref|XP_001387684.2| lysyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149388537|gb|EAZ63661.2| lysyl-tRNA synthetase [Pichia stipitis CBS 6054]
          Length = 593

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 79/373 (21%), Positives = 151/373 (40%), Gaps = 29/373 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P++ +  +D    YR+R                R+ I   +R++     F+E+++ 
Sbjct: 217 LHMLPTEHFGFKDQEARYRKRYLDLIMNDATRDRFKVRSKIIGYIRKFLDNRDFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  + F T     + +   ++++ +PE   K+L+  G ++++     +RN 
Sbjct: 277 ILNVIAGGAT-AKPFITH---HNDLSMDMFMRIAPELFLKELVVGGMDRVYEIGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y+A+     LM     +     +          + +         
Sbjct: 333 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGDYKVTYHPDGPQGEALTL 392

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + + + E   +  N+          +     L        +      T + +  
Sbjct: 393 DFSRPWKRVNMIEELEKVYNVKFPPGDQLHTEETGKFLKQILIDNKLDCTPPLTNARMLD 452

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL 
Sbjct: 453 KLVG---ELEDASINPTFIFGHPQMMSPLAKKDRNIPGLCERFEVFVATKEICNAYTELN 509

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE++ ++K +  +E   +DE F   L   +P ++G   G DRL M +T +N 
Sbjct: 510 DPFDQRQRFEEQARQKAQGDDEAQLVDEVFCNALEYGLPPTAGWGCGIDRLAMFLTDSNT 569

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 570 IREVLLFPTLKPD 582


>gi|296876143|ref|ZP_06900197.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432854|gb|EFH18647.1| lysine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 496

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-AKPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +  +M     II+ AA+  +      +Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFHDIMDLTEGIIQHAAKAVHGDGPIDYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMT------FEEAVALANEKHVPVEKHYTEVGQIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRLVML+T    I +V+ 
Sbjct: 432 QRFEAQARAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLLTNVTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|308811402|ref|XP_003083009.1| lysyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116054887|emb|CAL56964.1| lysyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 593

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 91/375 (24%), Positives = 161/375 (42%), Gaps = 28/375 (7%)

Query: 1   MHQIP-SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P      + +  +R+R                R+ I   +R+Y  +  F+E+++  
Sbjct: 216 LHMLPGFSGLRDVETRFRKRFLDLIMNNEVRDTFYIRSNIIRYVRKYLDDRDFLEVETPM 275

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G  T  R F T     + +   L+++ +PE   K+L+  G E+++     +RN  
Sbjct: 276 MNMIAGGAT-ARPFVTH---HNDLNMTLFMRIAPELYLKQLVVGGIERVYEIGRQFRNEG 331

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCN 160
               H PEFT  E+Y+A+  Y  LM     +I               +        +  +
Sbjct: 332 IDMTHNPEFTTCEFYQAYADYNDLMTMTEEMISGMVYAIKGSYKIQYHAKGPEEPPIEID 391

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  I++        NI   +T D   + +   L    ++  + +    T + +   
Sbjct: 392 FTPPFRRISMVSGLEEALNIKFPST-DFASKENEAFLQKLIKEKEVELTPPHTTARMLDA 450

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           ++ E +E    +     +  +P   S LA  + + P  T+RFEL+    ELCNA  EL D
Sbjct: 451 LVGEYLESQ--LVNPGFICDHPQIMSPLAKYHRSIPGMTERFELFVNTKELCNAYTELND 508

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           PI+QR RFE++   K+   +E   IDE F+  L   +P + G  +G DRL ML+   NNI
Sbjct: 509 PIDQRERFEEQAAAKESGDDEAMLIDETFVESLEIGLPPTGGWGLGVDRLTMLLADKNNI 568

Query: 340 NEVIWTPFSQSNQEE 354
            EV+  P  + +++ 
Sbjct: 569 KEVLLFPAMKPDEQA 583


>gi|160895077|ref|ZP_02075851.1| hypothetical protein CLOL250_02627 [Clostridium sp. L2-50]
 gi|156863508|gb|EDO56939.1| hypothetical protein CLOL250_02627 [Clostridium sp. L2-50]
          Length = 539

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 161/369 (43%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R +  +  F+E+++ 
Sbjct: 182 LQILPEKFHGLTDTDVRYRQRYVDLIMNQESKAVFIKRSQILKEIRNFLADRDFMEVETP 241

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 242 MLVANAGGAA-ARPFETHY---NALNEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 297

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+   ++ R  A +V      S+  +  +     E
Sbjct: 298 GVDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGSTKISYNGIEIDFGKPFE 357

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y  ID           D       A +  I         DI +    E  
Sbjct: 358 RLTMNDAIKKYTGIDFDQV------EDDAAAKKLADEHNIAYEERHKKGDIINLFFEEFC 411

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P+DP   +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 412 EEK--LIQPTFIMDHPIEISPLTKKKPSDPSKVERFELFINTWEMCNAYSELNDPIDQRE 469

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +        +E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 470 RFAAQDANAAAGDDEAEHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLF 529

Query: 346 PFSQSNQEE 354
           P  +S   E
Sbjct: 530 PTMKSLNSE 538


>gi|50556164|ref|XP_505490.1| YALI0F16291p [Yarrowia lipolytica]
 gi|49651360|emb|CAG78299.1| YALI0F16291p [Yarrowia lipolytica]
          Length = 582

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 149/374 (39%), Gaps = 28/374 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+     +D    +R+R              + R+ I   +R++     FIE+++ 
Sbjct: 206 LHMLPTHQSGFKDVETRFRQRYLDLIMNDSTRERFIVRSKIIQYIRKFLDNKDFIEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G E+++     +RN 
Sbjct: 266 MMNIIAGGAT-AKPFVTH---HNDLNLDMYMRIAPELYLKQLVVGGMERVYEIGRQFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--------NC 159
                H PEFT  E+Y A+     LM+    +     +                      
Sbjct: 322 GIDQTHNPEFTTCEFYEAYADVYDLMETTELLFSEMVKEITGGYKIEYQPQGPEGETLTI 381

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + + +         +                L  Q ++ G+      T + +  
Sbjct: 382 DFSRPWKRLDIIGTLEEKLGVKFPPGDQLHTAETNQFLQEQLKKVGLVCTPPLTNARMLD 441

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ + +E        T L  +P   S LA      P   +RFE++    E+CNA  EL 
Sbjct: 442 KLIGDYLEDTC--INPTFLYGHPEMMSPLAKYSRDRPGICERFEVFVATKEICNAYTELN 499

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE++ ++K    +E   +DE F   L   +P ++G   G DRL M +T +N 
Sbjct: 500 DPFDQRQRFEEQARQKDAGDDEAQLVDETFCTALEYGLPPTAGWGCGVDRLTMFLTNSNT 559

Query: 339 INEVIWTPFSQSNQ 352
           I EV+  P  +  Q
Sbjct: 560 IKEVLLFPAMKPEQ 573


>gi|55822661|ref|YP_141102.1| lysyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|55738646|gb|AAV62287.1| lysyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 511

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 150/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 159 LRPLPEKFHGLSDIETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDAQGFLEVETP 218

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 219 VLHNEAGGAA-AKPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRVFRNE 274

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +  +M     II+ AA+        ++Q          +
Sbjct: 275 GMDATHNPEFTTIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEIKINEPFK 334

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            I + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 335 RIHMVDAIKEITGVDFWQDMT------LEEAKAVAAEKNVPVEKHYTEVGHIINAFFEEF 388

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 389 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 446

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +   K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 447 SRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 506

Query: 345 TPFSQ 349
            P  +
Sbjct: 507 FPTMK 511


>gi|293608892|ref|ZP_06691195.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829465|gb|EFF87827.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 509

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 152 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLNNERFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    N++ + A ++       +Q    +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGTTDVPYQGEVFSFKGPFK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++    V        + + +  E 
Sbjct: 328 KISMFD-----AILENNPQFTPENVGDREFLAKFIREELKEEVKPGFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITDYPAETSPLARRNDDNPHVTDRFEFFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D +F+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 441 ERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVIL 500

Query: 345 TPFSQ 349
            P  +
Sbjct: 501 FPHMR 505


>gi|182683632|ref|YP_001835379.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|238691143|sp|B2IN95|SYK_STRPS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|182628966|gb|ACB89914.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 496

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINKPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMT------LEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|167757477|ref|ZP_02429604.1| hypothetical protein CLORAM_03027 [Clostridium ramosum DSM 1402]
 gi|237735040|ref|ZP_04565521.1| lysyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|167702474|gb|EDS17053.1| hypothetical protein CLORAM_03027 [Clostridium ramosum DSM 1402]
 gi|229381816|gb|EEO31907.1| lysyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 494

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YRRR   L            R  I  S++ Y     ++E+++ 
Sbjct: 141 LRPLPEKYHGLSDVEERYRRRYVDLIMNEEARKIAFARPKIIRSIQHYLDNQGYVEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     + +    YL+ + E   K+L+  G + ++     +RN 
Sbjct: 201 VLNPILGGAS-ARPFVTH---HNALDMNFYLRIATELGLKRLIVGGMDAVYEIGRLFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A    E +M     II  AA  V       ++    +     +
Sbjct: 257 GMDRTHNPEFTTIEVYKAFSDLEGMMDLTEGIISNAANEVCGTYELEYKGNKISLAPGFK 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ +A      ID        DQ         A++  I V     +  I +    + +
Sbjct: 317 RISMTDAIKEKTGIDFA------DQLSFDDAKKLAEEHHIEVEPHFGYGHIINEFFEKYV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  +P   S LA     DPRFT+RFEL+ C  E  NA  EL DPI+Q  
Sbjct: 371 EET--IIEPTFVYGHPIEISPLAKKNLDDPRFTQRFELFICGNEYANAFTELNDPIDQYE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++EK+   +E   +D D++  L   +P + G+ MG DRLVML+TG  +I EVI  
Sbjct: 429 RFANQLKEKELGNDEANEMDLDYVEALEYGLPPTGGMGMGIDRLVMLLTGQESIREVILF 488

Query: 346 PFSQSN 351
           P  ++ 
Sbjct: 489 PHMKNK 494


>gi|55820759|ref|YP_139201.1| lysyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55736744|gb|AAV60386.1| lysyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 511

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 150/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 159 LRPLPEKFHGLSDIETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDAQGFLEVETP 218

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 219 VLHNEAGGAA-AKPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRVFRNE 274

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +  +M     II+ AA+        ++Q          +
Sbjct: 275 GMDATHNPEFTTIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEIKINEPFK 334

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            I + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 335 RIHMVDAIKEITGVDFWQDMT------LDEAKAIAAEKNVPVEKHYTEVGHIINAFFEEF 388

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 389 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 446

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +   K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 447 SRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 506

Query: 345 TPFSQ 349
            P  +
Sbjct: 507 FPTMK 511


>gi|322391976|ref|ZP_08065440.1| lysine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321145202|gb|EFX40599.1| lysine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 496

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 151/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +  +M     II+  A+         +Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFHDIMDLTEGIIQHVAKAVKGDGPVIYQGTEIKLNEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T +  I +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWKDMT------FEEAKAIASEKKVPVEKHFTEFGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|270307940|ref|YP_003329998.1| lysyl-tRNA synthetase (class II) [Dehalococcoides sp. VS]
 gi|270153832|gb|ACZ61670.1| lysyl-tRNA synthetase (class II) [Dehalococcoides sp. VS]
          Length = 498

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 178/369 (48%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              L R+ + S++R +    +F+E+++ 
Sbjct: 137 LLPLPEKWHGLQDVEKRYRQRYLDLISNADARQTFLTRSRVISAIRCFMSAKEFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T       +    Y++ + E   K+L+  G ++++     +RN 
Sbjct: 197 VLQPEAGGA-LARPFITH---HQALDCDFYMRIALELHLKRLIVGGFDRVYEIGRIFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  Y+ +M     ++    +         F ++  +      
Sbjct: 253 GVSTRHNPEFTMMESYQAYADYKDVMDFLEEMVSSVVKEISGGYTVPFGDITLDFTPPWP 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA ID        D P +  L  +  +  ++V     W  +   ++ E +
Sbjct: 313 RLTIRDAVKQYAGID------FFDFPTKEALAAEMTRRKLKVDPAKDWGKLVDELVGEFV 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP+  +   T L  +P   S LA   P DPR T+RFE    N+E+ NA  EL DP+EQR 
Sbjct: 367 EPH--LIQPTFLTDHPVAMSPLAKQKPEDPRLTERFEAICANMEIANAFSELNDPVEQRA 424

Query: 287 RFEKEMQEKKKIYNETYP-IDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           RF+++++++ ++  E +  IDEDFLA L   MP + G+ +G DRLVML+T  ++I EVI 
Sbjct: 425 RFKEQLEKRNQLRTEEFESIDEDFLAALAYGMPPTGGLGVGIDRLVMLLTNHDSIREVIL 484

Query: 345 TPFSQSNQE 353
            P  +  ++
Sbjct: 485 FPALKDRED 493


>gi|168033030|ref|XP_001769020.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679775|gb|EDQ66218.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 619

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 87/406 (21%), Positives = 169/406 (41%), Gaps = 57/406 (14%)

Query: 1   MHQIPSQP--------------WWNR--------------DFHYRRR-----------PF 21
           +H +P                  W+               +  YR+R             
Sbjct: 208 LHMLPKTYGKGGKDQEDSKVPDHWHPGLSRNLDRYVLKDQETRYRQRYLDLMLNSDIRNV 267

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
              R+ +   +R +  E  F+E+++  +    G     + F T     + +   L+++ +
Sbjct: 268 FKTRSQVIRFVRRFLDERDFVEVETPMMNMIAGGAA-AKPFKTH---HNDLNMDLFMRIA 323

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   K+L+  G ++++     +RN      H PEFT  E+Y A+  Y+ LMK    ++ 
Sbjct: 324 PELYLKELIVGGLDRVYEIGKQFRNEGIDLTHNPEFTACEFYWAYADYDDLMKVTEEMLS 383

Query: 142 CAAEVANQKIFSFQN--------VNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNPDQ 191
              +          +        +  +       I + +    ++   I L  +L+  + 
Sbjct: 384 GMVKEITGSYKIQYHSNGLDQPAIEIDFTPPFRRIDMIKGLEEFSEGKIKLPKSLELLEA 443

Query: 192 PDRHL-LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           P+ +  L    ++  ++     T + +  +++   IE        T +  +P   S LA 
Sbjct: 444 PEVNQYLIEACEKFDVKCPPPQTTTRLLDKLVGHFIEEQCV--NPTFIMHHPQLMSPLAK 501

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
            + + P  T+RFEL+    E+CNA  EL DP+ QR RF  ++++++K  +E   IDE+F 
Sbjct: 502 WHRSVPGLTERFELFVNKHEVCNAYTELNDPVVQRERFADQVKDREKGDDEAMAIDENFC 561

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
             L   +P ++G  MG DR  M++T + NI EV+  P  + +++ I
Sbjct: 562 TALEYGLPPTAGWGMGIDRFTMMLTDSQNIKEVLLFPAMKPHEDVI 607


>gi|50424139|ref|XP_460656.1| DEHA2F06820p [Debaryomyces hansenii CBS767]
 gi|49656325|emb|CAG88988.1| DEHA2F06820p [Debaryomyces hansenii]
          Length = 593

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 78/373 (20%), Positives = 151/373 (40%), Gaps = 29/373 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P++ +  +D    YR+R                R+ I S +R++     F E+++ 
Sbjct: 217 LHMLPTEHYGFKDQEARYRKRYLDLIMNESTRDRFKVRSQIISFIRKFLDTRDFTEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++++ +PE   K+L+  G ++++     +RN 
Sbjct: 277 MMNVIAGGAT-AKPFVTH---HNDLNMDMFMRIAPELFLKELVVGGMDRVYEIGRQFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y+A+     LM     +     +          +           
Sbjct: 333 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELLFSEMVKKITGDYKVTYHPEGPEGKALTL 392

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + + + E   +  N+          +     L        +  +   T + +  
Sbjct: 393 DFTRPWKRVNMIEELEKVFNVTFPAGDQLHTEETGKFLKQILIDHKLDCSPPLTNARMLD 452

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++    E        T +  +P   S LA     +    +RFE++    E+CNA  EL 
Sbjct: 453 KLVG---ELEDASINPTFIFGHPQMMSPLAKKDRDNVGLCERFEVFVATKEICNAYTELN 509

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE++ ++K +  +E   +DE F   L   +P ++G   G DRL M +T +N 
Sbjct: 510 DPFDQRQRFEEQARQKAQGDDEAQMVDETFCNALEYGLPPTAGWGCGIDRLAMFLTDSNT 569

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 570 IREVLLFPTLKPD 582


>gi|262373049|ref|ZP_06066328.1| lysyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262313074|gb|EEY94159.1| lysyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 523

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 159/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 167 LRPLPDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETP 226

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  + F T     + +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 227 MMHVIPGGAS-AKPFVTH---HNALDMELYLRIAPELYLKRLVVGGFERVFEINRNFRNE 282

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    N++   A ++       +     +     +
Sbjct: 283 GVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLAIDILGTTDVPYGEEVYSFKGPFK 342

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ-AGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L    Q+    +V        + + +  E 
Sbjct: 343 KISMFD-----AILEHNPDFTPENVNDRDFLAKFTQEVLKEQVKPGFGLGKLQTIVFEET 397

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 398 VETK--LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQA 455

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D DF+  L   +P ++G  +G DRLVML   A +I +V+ 
Sbjct: 456 ERFQAQVAEKDAGDDEAMHYDADFIEALEYGLPPTAGEGIGIDRLVMLFANAPSIRDVLL 515

Query: 345 TPFSQ 349
            P  +
Sbjct: 516 FPHMR 520


>gi|115453943|ref|NP_001050572.1| Os03g0586800 [Oryza sativa Japonica Group]
 gi|55583785|sp|Q6F2U9|SYK_ORYSJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|50399950|gb|AAT76338.1| putative Lysyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|108709560|gb|ABF97355.1| Lysyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549043|dbj|BAF12486.1| Os03g0586800 [Oryza sativa Japonica Group]
          Length = 602

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 81/363 (22%), Positives = 156/363 (42%), Gaps = 28/363 (7%)

Query: 9   WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R+ + S +R++     F+E+++  +    G   
Sbjct: 247 LRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMMNMIAGGAA 306

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LY++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 307 -ARPFVTH---HNELNMRLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 362

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A+  Y  L++    ++    +          +        +  +       I 
Sbjct: 363 TTCEFYMAYADYNDLIELTETMLSGMVKELTGGYKIKYHANGVEKPPIEIDFTPPFRKID 422

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E     A +++   L + +      L     +  ++     T + +  +++   +E  
Sbjct: 423 MIEELEAMAKLNIPKDLSSDEAN--KYLIDACAKYDVKCPPPQTTTRLLDKLVGHFLEET 480

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL DP+ QR RFE
Sbjct: 481 CV--NPTFIINHPEIMSPLAKWHRSRPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFE 538

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +++++++   +E   +DE F   L   +P + G  +G DRL ML+T + NI EV+  P  
Sbjct: 539 EQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAM 598

Query: 349 QSN 351
           +  
Sbjct: 599 KPQ 601


>gi|242762857|ref|XP_002340463.1| lysyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218723659|gb|EED23076.1| lysyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 602

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 84/367 (22%), Positives = 150/367 (40%), Gaps = 25/367 (6%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +H +P +   + +  +R+R                R  I   +R +F    F E+++  +
Sbjct: 215 LHALP-RGLQDSETRFRQRYLDLIMNESSRKVFTTRAKIVRYVRNFFDSRDFTEVETPMM 273

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G  T  + F T     + +   L+++ +PE   K L+  G E+++     +RN   
Sbjct: 274 NAIAGGAT-AKPFITH---HNDLNLNLFMRVAPELYLKMLIVGGLERVYELGRQFRNEGI 329

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNPFS 163
              H PEFT  E+Y A+     +M     ++    +       +  +       N N  +
Sbjct: 330 DLTHNPEFTTCEFYWAYADVYDVMDLTEELVSGLVKHVTGGYETTFHTQSGEVYNVNWKA 389

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               + +  A                       L    ++ G+      T + +  +++ 
Sbjct: 390 PWRRVEMIPALEEATGEKFPPGDQLHTDETNAFLKRVLEKTGVECTPPMTNARMLDKLVG 449

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E IE        T +  +P   S LA  + ++    +RFE + C  E+ NA  EL DP +
Sbjct: 450 EFIEETC--INPTFITGHPQMMSPLAKYHRSNIGLCERFEAFVCKKEIVNAYTELNDPFD 507

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE++ ++K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I EV
Sbjct: 508 QRLRFEEQARQKSQGDDEAQLIDENFCTSLEYGLPPTGGWGMGIDRLVMFLTDNYSIKEV 567

Query: 343 IWTPFSQ 349
           +  PF +
Sbjct: 568 LTFPFMK 574


>gi|194246497|ref|YP_002004136.1| Lysyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193806854|emb|CAP18283.1| Lysyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 497

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 159/368 (43%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWWNRDF---HYRR----------RPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    ++      RR          R     R+ I  ++R +F    F+E+++ 
Sbjct: 140 LLPLPDKYKGLKNKEIIRKRRYIDLIMNSKTREIFFLRSQIIKNIRNFFDNKNFLEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +LQ   G  T  + F T     + +    YL+ + E S KKL+  G E ++     +RN 
Sbjct: 200 TLQSILGGAT-AKPFVT---YHNDLESNFYLRIATELSLKKLIVGGLEAVYEIGKVFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT LE Y A      +M      ++   +   + +      +   F++ E 
Sbjct: 256 GIDASHNPEFTSLEIYLAFADMRDMMNLTKQCLKDVCKKTLKTLEFKYQNHIINFNKFEE 315

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I + +A  +   I+    ++     +  L      Q  I +    +   I      + +E
Sbjct: 316 IHILDAIKQKTGINFWNDMNLETAKNLSL------QHQINILPHFSIGHIIEAFFEKYVE 369

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     D R T RFEL+    E  NA  EL DPIEQ  R
Sbjct: 370 KE--LIQPTFIYGHPIEISPLAKTNQKDKRLTDRFELFIVGKEFANAFSELNDPIEQEKR 427

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++++KK    E   +D DF+  L   MP + G+ +G DRLVML+T  +NIN+VI  P
Sbjct: 428 FLNQLEQKKLGNQEANEMDLDFIEALEYGMPPTGGMGLGIDRLVMLLTNVDNINDVILFP 487

Query: 347 FSQSNQEE 354
             ++ ++E
Sbjct: 488 HFKNQKKE 495


>gi|54294664|ref|YP_127079.1| hypothetical protein lpl1741 [Legionella pneumophila str. Lens]
 gi|81368463|sp|Q5WVS0|SYK_LEGPL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|53754496|emb|CAH15980.1| hypothetical protein lpl1741 [Legionella pneumophila str. Lens]
          Length = 496

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 88/364 (24%), Positives = 148/364 (40%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD-------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D              +   R   L R+ +  + RE+  +N F+E+++ 
Sbjct: 143 LRPLPDKFHGLADQELKYRKRYVDLIANEDSRKTFLIRSHLIKAFREFMDDNHFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 203 MMHPIPGGA-LARPFVTH---HNTLDMTMYLRIAPELYLKRLVVGGFERVYEINRNFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM     +      +V   +   +Q    +     E
Sbjct: 259 GISTRHNPEFTMLEFYQAYADYNDLMNFTEQLFHYLCDKVLATRQIEYQGQVIDFNKPFE 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V EA  +Y        +                   +     D    +   +  E +
Sbjct: 319 RLSVKEAILKY-----HPDIKAQQLETVEGCRTLLNDLDLPYKETDGLGKLQIILFEETV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 374 EHQ--LFQPTFITEYPTEISPLARRSDTNPEVTDRFEFFIAGREIANGFSELNDAEDQAE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++EK     E    D D++  L   +P ++G  +G DRLVML T + +I +VI  
Sbjct: 432 RFRKQVEEKDAGDLEAMHFDSDYIEALEYGLPPTAGEGIGIDRLVMLFTNSQSIRDVILF 491

Query: 346 PFSQ 349
           P  +
Sbjct: 492 PHLR 495


>gi|313892212|ref|ZP_07825805.1| lysine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119350|gb|EFR42549.1| lysine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 503

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 170/366 (46%), Gaps = 29/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR R              +KR  + +++R+++ ++ F+E+++ 
Sbjct: 139 LRPMPEKWHGLTDKEQRYRMRYVDLICNPQVKDTFIKRTKMLNAIRKWYTDHGFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + R F T L   + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 199 VLQPLYGGA-NARPFVTHL---NAMDMTMYLRIAPELYLKRLVVGGIDRVFEITRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   E  +     I+   A +      F ++ V  +      
Sbjct: 255 GMDAKHNPEFTAMESYQAYGDIEDAIHQTEEIVAECARICYGSTKFVYEGVELDVTPPWP 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T++EA  +Y   D                   A +  +     +    I + +  E +
Sbjct: 315 RLTMSEAVKKYTGEDFEAA------KTLEEARAIADRLNVEYGEYEGPGKILADVFDEYV 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + R+P   S L+ +   D RFT RFE Y    EL N   E+ DPI+QR 
Sbjct: 369 EDK--LVQPIHITRHPIEVSPLSKLSADDHRFTDRFESYIFTRELANGFSEINDPIDQRK 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ ++    +E +P+DEDF+  L   MP + G+ +G DRL ML+TG+++I +VI+ 
Sbjct: 427 RFEIQLADRD--DDEAHPMDEDFIRSLEYGMPPTGGLGIGLDRLFMLMTGSHSIRDVIFF 484

Query: 346 PFSQSN 351
           P  +  
Sbjct: 485 PTMKPE 490


>gi|307701961|ref|ZP_07638969.1| lysyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616606|gb|EFN95795.1| lysyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 496

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 153/364 (42%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D       PD        + A++      H      I +    E +
Sbjct: 320 RVHMVDAIKEITGVDFW-----PDMTLEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|256272104|gb|EEU07106.1| Krs1p [Saccharomyces cerevisiae JAY291]
          Length = 527

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 150/374 (40%), Gaps = 30/374 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I   +R +  + +FIE+++ 
Sbjct: 149 LHMLPADHFGFKDQETRYRKRYLDLIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 209 MMNVIAGGAT-AKPFITH---HNDLDMDMYMRIAPELFLKQLVVGGLDRVYEIGRQFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------N 158
                H PEFT  E+Y+A+     LM     +     +          +           
Sbjct: 265 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGSYIIKYHPDPADPAKELE 324

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     + I + E   +  N+   +            L        +      T + + 
Sbjct: 325 LNFSRPWKRINMIEELEKVFNVKFPSGDQLHTAETGEFLKKILVDNKLECPPPLTNARML 384

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 385 DKLVG---ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTEL 441

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE++ ++K +  +E   +DE F   L   +P + G   G DRL M +T +N
Sbjct: 442 NDPFDQRARFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSN 501

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  + +
Sbjct: 502 TIREVLLFPTLKPD 515


>gi|294874358|ref|XP_002766916.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239868291|gb|EEQ99633.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 585

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 88/372 (23%), Positives = 150/372 (40%), Gaps = 30/372 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           MH +P   +  +D    +R+R               +R+ I   +R Y     F+E+++ 
Sbjct: 209 MHMLPKAQFGLKDQEVRFRQRYLDLIMNPHVRETFQRRSQIIGYIRSYLGNRGFMEVETP 268

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  + F T     + +   LY++ +PE   K L+  G +++F     +RN 
Sbjct: 269 MMNMIAGGAS-AKPFITH---HNELDLDLYMRIAPELYLKMLVVGGLDRVFEIGKNFRNE 324

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y A+  Y  LM     +I    +          +           
Sbjct: 325 GIDLTHNPEFTSCEFYMAYADYNDLMNMTEEMISGMVKSIFGTYKVTFHPEGPEGPAKEI 384

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ E   R + + L    D   +  R  L   A +  +      T + +  
Sbjct: 385 DFSPPWKRVSMVEEIERQSGVSLN--RDFAAEEARQQLDELATKFDVECPAPRTSARLLD 442

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           ++    IE    I   T +  +P   S LA  + + P  T+RFE +    E+CNA  EL 
Sbjct: 443 KLCGFFIEDK--IVSPTFVTEHPQIMSPLAKWHRSKPGLTERFEGFVMGKEICNAYTELN 500

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP++Q   F  + Q K    +E   +D  F+  L   +P + G  +G DRL M +T   N
Sbjct: 501 DPVKQLACFTAQAQAKAAGDDEACDVDNSFVTALEYGLPPTGGWGLGVDRLCMFLTDNIN 560

Query: 339 INEVIWTPFSQS 350
           I EVI  P  + 
Sbjct: 561 IKEVILYPAMKP 572


>gi|15644453|ref|NP_229505.1| lysyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|11387158|sp|Q9X231|SYK_THEMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|4982282|gb|AAD36772.1|AE001810_11 lysyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 502

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 157/367 (42%), Gaps = 30/367 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               KR      +RE+     FIE+++ 
Sbjct: 137 LRPLPEKWHGIKDKEIIYRQRYLELIVNDEAIERFKKRFKAVRVIREFLNSRGFIEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L Y  G     R F T L   +     +YL+ +PE   K+L+  G EKI+     +RN 
Sbjct: 197 ILHYVTGGA-EARPFVTHL---NVFDIDMYLRIAPELYLKRLIVGGFEKIYEIGKNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +I             S+Q    +     +
Sbjct: 253 GISYKHSPEFTSIEIYQAYADYNDMMDLTEELIVEVVKRTCGTLKISYQGKEIDFTPPWK 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D+    D        +L  + ++ G+ +      + +  ++     
Sbjct: 313 RVRMRDFLKEKLGVDILEDPD-------EVLLKKLEEHGVEL-EIKNRAHLIDKLRDLVE 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA  +  DPR T+RFEL     E+ NA  EL DP++Q  
Sbjct: 365 EE---LVNPTFIIDHPVVISPLAKRHREDPRLTERFELIIFGREIANAFSELNDPVDQYQ 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ + +++   E + +D DF+  L   MP + G+ +G DRL M +T +  I +VI  
Sbjct: 422 RFLEQAKMREEGDEEAHMMDLDFVRALEYGMPPTGGLGIGLDRLFMFITDSPTIRDVIPF 481

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 482 PIVKPKK 488


>gi|126180281|ref|YP_001048246.1| lysyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|229559860|sp|A3CY14|SYK_METMJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|125863075|gb|ABN58264.1| lysyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 508

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 29/364 (7%)

Query: 3   QIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +    +  +  YR+R                R+ I S LR++  E  ++E ++ +L
Sbjct: 141 PLPEKFHGLKNVETRYRQRYLDLIMNEESRETFRARSRIISLLRQFLFERDYLEFETPTL 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G   + R F+T     + + + LYL+ +PE   K+L+  G +K+F  A  +RN + 
Sbjct: 201 QPIYGGA-NARPFTTH---HNALDQKLYLRIAPELYLKRLVVGGFDKVFEIAKNFRNEDI 256

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPEYI 168
              H PEFTM+E Y A+  Y  +M     I+   A +V    + SF   + +       +
Sbjct: 257 DTNHNPEFTMVEVYEAYRDYNDMMNLTEEILSHLAEKVLGTTVCSFAGHDLDFSRPWRRL 316

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIE 227
           T+ EA   YA ID               L+    +  +       T  +          E
Sbjct: 317 TMEEAVREYAGIDFPAMS-------LEELHAFGLEHCVEGCESAATRGEYLVLFFEHFGE 369

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +  +   T +  +P   S LA  + +    T+RFEL+   +E+ N   EL DP++Q+ R
Sbjct: 370 KH--LIQPTFIYDFPIENSPLAKKHRSKEGLTERFELFIAGMEMANGFSELNDPLDQKAR 427

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E++  +++K   E   ID DF+  L   MP + G+ +G DRLVML+TG ++I EV+  P
Sbjct: 428 LEQQDAKRRKGDLEAQMIDYDFINALGYGMPPTGGVGIGIDRLVMLLTGKDSIKEVLLFP 487

Query: 347 FSQS 350
             ++
Sbjct: 488 QMKT 491


>gi|325121342|gb|ADY80865.1| lysyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 520

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 163 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLNNERFMEVETP 222

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 223 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 278

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    N++ + A ++       +Q    +     +
Sbjct: 279 GVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGTTDVPYQGEVFSFKGPFK 338

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++    V        + + +  E 
Sbjct: 339 KISMFD-----AILENNPQFTPENVSDREFLAKFIREELKEEVKPGFGLGKLQTIVFEET 393

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 394 VETK--LRQPTFITDYPAETSPLARRNDDNPHVTDRFEFFIGGRELANGFSELNDPIDQA 451

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D +F+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 452 ERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVIL 511

Query: 345 TPFSQ 349
            P  +
Sbjct: 512 FPHMR 516


>gi|297172686|gb|ADI23653.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF4000_15H13]
          Length = 508

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 92/380 (24%), Positives = 163/380 (42%), Gaps = 41/380 (10%)

Query: 1   MHQIP---------------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLRE 34
           +  +P                  + +++  YR+R                R+ I S+LR 
Sbjct: 142 LRPLPFGKVETDAETGERTVHSGFSDQETRYRQRYADLAVHPEVREVFRTRSRIVSALRS 201

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +F    F+E+++  LQ   G  +  + F T       + + +YL+ + E   K+L+  G 
Sbjct: 202 FFDSEGFLEVETPVLQPLYGGAS-AKPFVTT---HHALDQTMYLRIADELYLKRLIVGGL 257

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFS 153
           ++++  A  +RN     +H PEFTMLEWY+A   Y   M     ++    +     +  +
Sbjct: 258 DRVYEIAKDFRNEGLSRVHNPEFTMLEWYQAFADYRDQMDMVERMLLHVLDSVIGSRTVT 317

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
           +           + +++    +    ID+    ++        L  +A++  +       
Sbjct: 318 YGEHEITFEPPFQRLSLMGGLSDALGIDVHEMGESE-------LRAKAEELKVPDLDGAG 370

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
              +  ++  E +EP   +     +  +P   S LA  +  D R T+RFELY    EL N
Sbjct: 371 RGKLIDKLFGELVEP--DLIQPVFVIDHPKELSPLAKPHREDARVTERFELYIAGAELLN 428

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
           A  EL DPI+QR RFE +        +E   +DED++  L   MP + G+ MG DRLVM+
Sbjct: 429 AFSELNDPIDQRQRFEAQAALLAAGDDEAQQVDEDYIRALEYGMPPTGGVGMGVDRLVMM 488

Query: 333 VTGANNINEVIWTPFSQSNQ 352
           +T   +I +VI  P  +  +
Sbjct: 489 LTNQTSIRDVILFPILRDEE 508


>gi|289168135|ref|YP_003446404.1| Lysyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288907702|emb|CBJ22539.1| Lysyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 496

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 152/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + EA      +D        D        + A++      H      I +    E +
Sbjct: 320 RVHMVEAIKEITGVDFWQ-----DMTFEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|124359384|gb|ABN05850.1| Lysyl-tRNA synthetase, class-2; Aminoacyl-transfer RNA synthetase,
           class II [Medicago truncatula]
          Length = 610

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 84/364 (23%), Positives = 153/364 (42%), Gaps = 29/364 (7%)

Query: 9   WWNRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR            R     R+ I S +R +  +  F+E+++  +    G   
Sbjct: 238 LKDQETRYRLRHLDLMLNTEVREIFRTRSKIISYVRSFLDKLDFLEVETPMMNMIAGGAA 297

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   L+++ +PE   KKL+  G  +++     +RN      H PEF
Sbjct: 298 -ARPFVTH---HNDLNMRLFMRIAPELYLKKLVVGGLNRVYEIGKQFRNEGIDLTHNPEF 353

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------NCNPFSEPEYI 168
           T  E+Y A++ Y  LM+   N++        +  +  +             +       I
Sbjct: 354 TTCEFYMAYKDYYDLMEITENMLSGMVYELTKGSYKIKYHADGLDKDPIEIDFTPPFRRI 413

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            + E     A + +   L + +      L     +  I+    +T + +  +++   +E 
Sbjct: 414 DMIEGLEEMAGLSIPKDLTSAEAN--QYLRDACLKYEIKCPPPETTARLLDKLVGHFLEE 471

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                  T +  +P   S LA  +   P  T+RFEL+    EL NA  EL DP+ QR RF
Sbjct: 472 TCV--NPTFIINHPEIMSPLAKWHRTKPGLTERFELFINKHELANAYTELNDPVVQRQRF 529

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             ++++++   +E   +DE F   L   +P ++G  +G DRL ML+T + NI EV+  P 
Sbjct: 530 ADQLKDRQSGDDEAMALDETFCTALEYGLPPTAGWGLGIDRLTMLLTDSQNIKEVLLFPA 589

Query: 348 SQSN 351
            +  
Sbjct: 590 MKPQ 593


>gi|76787024|ref|YP_329498.1| lysyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|123602016|sp|Q3K1V5|SYK_STRA1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|76562081|gb|ABA44665.1| lysyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 496

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 151/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R +   N F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRDSFDRFVTRSKIISEIRRFMDSNGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAS-ARPFITH---HNAQDIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     II+   +        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEAYQAYADYQDIMDLTEGIIQHVTKTVKGDGPINYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      ID    +              AQ+  + +    T    I +    E 
Sbjct: 320 RVHMVDAVKEITGIDFWKEMT------LEEAQALAQEKNVPLEKHFTTVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEDT--LIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFVMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +   K+   +E   +D D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQASAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|148270135|ref|YP_001244595.1| lysyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281412523|ref|YP_003346602.1| lysyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|166230599|sp|A5ILE6|SYK_THEP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|147735679|gb|ABQ47019.1| lysyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|281373626|gb|ADA67188.1| lysyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 502

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 157/367 (42%), Gaps = 30/367 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               KR      +RE+     FIE+++ 
Sbjct: 137 LRPLPEKWHGIKDKEIIYRQRYLELIVSDEAIERFRKRFKAVQVIREFLNSRGFIEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L Y  G     R F T L   +     +YL+ +PE   K+L+  G EKI+     +RN 
Sbjct: 197 ILHYVTGGA-EARPFVTHL---NVFDIDMYLRIAPELYLKRLIIGGFEKIYEIGKNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +I             S+Q    +     +
Sbjct: 253 GISYKHSPEFTSIEIYQAYADYNDMMDLTEELIVEVVKRTCGTLKISYQGKEIDFTPPWK 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D+    D        +L  + ++ G+ +      + +  ++     
Sbjct: 313 RVRMRDFLKEKLGVDILEDPD-------EVLLKKLEEYGVEL-EIKNRAHLIDKLRDLVE 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA  +  DPR T+RFEL     E+ NA  EL DP++Q  
Sbjct: 365 EE---LVNPTFIIDHPVVISPLAKRHREDPRLTERFELIIFGREIANAFSELNDPVDQYQ 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ + +++   E + +D DF+  L   MP + G+ +G DRL M +T +  I +VI  
Sbjct: 422 RFLEQAKMREEGDEEAHMMDLDFVRALEYGMPPTGGLGIGLDRLFMFITDSPTIRDVIPF 481

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 482 PIVKPQK 488


>gi|307706787|ref|ZP_07643592.1| lysyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617872|gb|EFN97034.1| lysyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 496

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMT------LEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|170288919|ref|YP_001739157.1| lysyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|238688842|sp|B1LAX6|SYK_THESQ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|170176422|gb|ACB09474.1| lysyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 502

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 157/367 (42%), Gaps = 30/367 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               KR      +RE+     FIE+++ 
Sbjct: 137 LRPLPEKWHGIKDKEIIYRQRYLELIVSDEAIERFRKRFKAVQVIREFLNSRGFIEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L Y  G     R F T L   +     +YL+ +PE   K+L+  G EKI+     +RN 
Sbjct: 197 ILHYVTGGA-EARPFVTHL---NVFDIDMYLRIAPELYLKRLIIGGFEKIYEIGKNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +I             S+Q    +     +
Sbjct: 253 GISYKHSPEFTSIEIYQAYADYNDMMDLTEELIVEVVKRTCGTLKISYQGKEIDFTPPWK 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D+    D        +L  + ++ G+ +      + +  ++     
Sbjct: 313 RVRMRDFLKEKLGVDILEDPD-------EVLLKKLEEYGVEL-EIKNRAHLIDKLRDLVE 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA  +  DPR T+RFEL     E+ NA  EL DP++Q  
Sbjct: 365 EE---LVNPTFIIDHPVVISPLAKRHREDPRLTERFELIIFGREIANAFSELNDPVDQYQ 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ + +++   E + +D DF+  L   MP + G+ +G DRL M +T +  I +VI  
Sbjct: 422 RFLEQAKMREEGDEEAHMMDLDFVRALEYGMPPTGGLGIGLDRLFMFITDSPTIRDVIPF 481

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 482 PIVKPKK 488


>gi|310822815|ref|YP_003955173.1| lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395887|gb|ADO73346.1| Lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 516

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              LKRN +   +RE+     +IE+++ 
Sbjct: 154 LRPLPEKWHGLTDVEIRYRQRYLDLVSNPEVKQTFLKRNKLVRFIREFLDSRDYIEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +          R F T     + +   LY++ +PE   K+L+  G E+++     +RN 
Sbjct: 214 MMHPLVSGAA-ARPFKTH---HNALDIELYMRIAPELYLKRLVVGGIERVYEINRNFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+ +YE LM     +I  AA+         +Q    +     +
Sbjct: 270 GISTRHNPEFTMLEFYQAYATYEDLMDLTEQMISEAAQAVTGATKVPYQGHELDFGKGWK 329

Query: 167 YITVAEAFAR-YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I + EA             + +PD+    LL     +A  R        ++   +    
Sbjct: 330 RIPMTEAIREAVGGALSDKDMADPDKLRHELLKTSHGEAERRAIETMNQGELVGALFEAH 389

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     +P  T RFEL+    E+ NA  EL DP++Q+
Sbjct: 390 VEQK--LIHPTFITHFPTSVSPLARRNDQNPEITDRFELFVAGREIANAFSELNDPLDQK 447

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  +++ K++   ET   DED++  L   MP ++G  +G DRL ML T A +I +VI 
Sbjct: 448 GRFLGQLEAKQRGQQETMDYDEDYIRALEHGMPPTAGEGIGIDRLTMLFTDAPSIRDVIL 507

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 508 FPLLKPQ 514


>gi|322372640|ref|ZP_08047176.1| lysine--tRNA ligase [Streptococcus sp. C150]
 gi|321277682|gb|EFX54751.1| lysine--tRNA ligase [Streptococcus sp. C150]
          Length = 496

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 150/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLSDVETIYRKRYLDLISNRDSFDRFVTRSKIISEIRRYLDAQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-AKPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  +  +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFHDIMNLTEGIIQHAAKAVKGDGPINYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            I + +A      ++    +              A +  + V    T    I +    E 
Sbjct: 320 RIHMVDAIKEITGVNFWQDMT------LDEAKAIAAEKNVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +   K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|86157505|ref|YP_464290.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|123723269|sp|Q2IPX5|SYK_ANADE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|85774016|gb|ABC80853.1| lysyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 513

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 99/371 (26%), Positives = 158/371 (42%), Gaps = 24/371 (6%)

Query: 2   HQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R              +KR  I S +R +     ++E+++ +
Sbjct: 145 RPLPEKWHGLTDVEQRYRQRYVDLVVTPGVREAFVKRARIVSGIRRFLDARGYLEVETPT 204

Query: 49  LQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           L           R F T     + +   L L+ + E   K+L+  G ++++     WRN 
Sbjct: 205 LHKPEEAGGAAARPFETH---HNALDLDLKLRIATELHLKRLVVGGLDRVYEIGRIWRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMN-IIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E+Y+A+ ++E LM+     + + A EV    + +FQ    +      
Sbjct: 262 GIDRRHNPEFTSIEFYQAYATHEDLMRLTEELMHQLAVEVTGGPVVTFQGQAIDLTPPYP 321

Query: 167 YITVAEAFARYANI---DLGTTLDNPDQPDRHLLYL--QAQQAGIRVAHDDTWSDIFSRI 221
            +++ E  AR   +   D        +   R             +  A   T  +  +  
Sbjct: 322 RVSMLEVGARALGLAPDDALAGRGLAEALSRAAARENDSEDAWKLEQAAKKTPGEAVALA 381

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
                EP L  +    +  +P   S L+    ADPR   RFEL+A  +EL NA  EL DP
Sbjct: 382 FEIFGEPQLPKDRPAFVVDFPLETSPLSRRRDADPRLVDRFELFAAGMELANAFSELNDP 441

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE +M+ K     E  P DEDF+  L   MP ++G  +G DRL ML T + +I 
Sbjct: 442 ADQRARFEAQMRAKAAGDEEAMPYDEDFVRALEHGMPPTAGEGIGIDRLAMLFTDSASIR 501

Query: 341 EVIWTPFSQSN 351
           +VI  P  +S 
Sbjct: 502 DVILFPLLKSR 512


>gi|113475998|ref|YP_722059.1| lysyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110167046|gb|ABG51586.1| lysyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 522

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 90/373 (24%), Positives = 159/373 (42%), Gaps = 31/373 (8%)

Query: 3   QIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
             P   +   + +   R R                R+ I  S+R Y  +  F EI++  L
Sbjct: 152 PFPDSYYGVNDPEICRRHREMDLAGNAEALQRFRVRSKIMQSIRTYLWDANFYEIETPIL 211

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G     R F T     + +   LYL+ + E   K+ +  G E++F     +RN   
Sbjct: 212 QSIYGGAA-ARPFVTH---HNALDVDLYLRIATELFLKRAICGGFERVFELGRVFRNEGI 267

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFT LE Y+A+  Y +++    ++I  +       +   +        E +Y  
Sbjct: 268 DSTHNPEFTSLEVYQAYADYFEILGLVEDVICYSLTNILGDLKQIEYQGQTISLERQYDY 327

Query: 170 VAE-------AFARYANIDLGTTLDNPDQPDRHLLYLQ--AQQAGIRVA--HDDTWSDIF 218
             +        +     ++        D  +  L      A++  ++++     +   + 
Sbjct: 328 SQKYPNFTGKHWQVKTMVEAVKDETGLDFDNLELPEAIRAAEKLNLKLSKLETQSLGYLL 387

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             +  +K+E    +   T +  +P   S LA  + + P F +RFEL+    E  N   EL
Sbjct: 388 YAVFDQKVEST--LIQPTFVIDFPVEVSPLAKRHHSKPGFVERFELFIHGTEYSNGFSEL 445

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE+++ +++   +E +P+DEDF+  L+  MP   G+ +G DRLVML+T   
Sbjct: 446 NDPQDQRQRFEEQIAQREAGDDEAHPMDEDFIQALSLGMPNCGGMGIGVDRLVMLLTNTQ 505

Query: 338 NINEVIWTPFSQS 350
           +I +VI  P  +S
Sbjct: 506 SIRDVIMFPTMRS 518


>gi|169832789|ref|YP_001694171.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225856392|ref|YP_002737903.1| lysyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|238688279|sp|B1IAN6|SYK_STRPI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|168995291|gb|ACA35903.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|225725099|gb|ACO20951.1| lysyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 496

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 153/364 (42%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        D   +    + A++      H      I +    E +
Sbjct: 320 RVHMVDAIREITGVDFWQ-----DMTLKEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|22536914|ref|NP_687765.1| lysyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25010826|ref|NP_735221.1| lysyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76798749|ref|ZP_00780967.1| lysyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77405989|ref|ZP_00783067.1| lysyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77410771|ref|ZP_00787129.1| lysyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77413074|ref|ZP_00789275.1| lysyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|39932195|sp|Q8E0I1|SYK_STRA5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|39932198|sp|Q8E656|SYK_STRA3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|22533765|gb|AAM99637.1|AE014225_20 lysyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|23095205|emb|CAD46415.1| lysyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76585904|gb|EAO62444.1| lysyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77160867|gb|EAO71977.1| lysyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77163150|gb|EAO74103.1| lysyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77175384|gb|EAO78175.1| lysyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 496

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 151/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R +   N F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRDSFDRFVTRSKIISEIRRFMDSNGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAS-ARPFITH---HNAQDIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     II+   +        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEAYQAYADYQDIMDLTEGIIQHVTKTVKGDGPINYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      ID    +              AQ+  + +    T    I +    E 
Sbjct: 320 RVHMVDAVKEITGIDFWKEMT------LEEAQALAQEKNVPLEKHFTTVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEDT--LIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +   K+   +E   +D D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQASAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|290998780|ref|XP_002681958.1| lysyl tRNA synthetase [Naegleria gruberi]
 gi|284095584|gb|EFC49214.1| lysyl tRNA synthetase [Naegleria gruberi]
          Length = 653

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 101/384 (26%), Positives = 168/384 (43%), Gaps = 42/384 (10%)

Query: 2   HQIPSQPWWN--RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P + +    +D  YR+R              + R+ I + LR +  E  F+E+++  
Sbjct: 265 HMLPKEHYGLTNQDTRYRQRYLDLIMNKKSRDIFVTRSKIIAHLRTFLNERGFLEVETPM 324

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +   PG   + R F+T     + +   LY++ SPE   K+L+  G E+++     +RN  
Sbjct: 325 MNMIPGGA-NARPFTT---YHNDLEMLLYMRISPELYLKQLVVGGLERVYEIGKNFRNEG 380

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK------------------ 150
               H PEFT  E+Y A+  Y  LMK    ++   A VAN K                  
Sbjct: 381 IDLTHNPEFTACEFYMAYADYNDLMKITEELLSEMALVANGKDPKNLPSVVPDEWYHRTF 440

Query: 151 --IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
               + ++V  N     + + +  +     N+ + T LD  +   R  L    ++  +  
Sbjct: 441 TMPHTNKDVVVNFRPPFKRLPMISSIEERLNVKIPTQLDTEET--RLFLVDLLKKNKVDC 498

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
           +   T + +  +++ E +EP       T +  +P   S LA  +  +   T+RFEL    
Sbjct: 499 SPPMTTARMLDKLVGEYLEPEC--INPTFITEHPQIMSPLAKWHRDNKVLTERFELMIIG 556

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFD 327
            E+CNA  EL  P  QR RFE ++ +K    NE   +DEDF   L   +P + G  +G D
Sbjct: 557 KEVCNAYTELNQPFIQRERFEDQVAQKDAGDNEAQFMDEDFCKSLEYGLPPTGGWGIGLD 616

Query: 328 RLVMLVTGANNINEVIWTPFSQSN 351
           RL M+++   NI EVI  P  +  
Sbjct: 617 RLTMILSNNYNIKEVILFPAQKPE 640


>gi|319744806|gb|EFV97146.1| lysine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 533

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 151/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R +   N F+E+++ 
Sbjct: 181 LRPLPEKFHGLTDIETIYRKRHLDLISNRDSFDRFVTRSKIISEIRRFMDSNGFLEVETP 240

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 241 VLHNEAGGAS-ARPFITH---HNAQDIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 296

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     II+   +        ++Q          +
Sbjct: 297 GMDATHNPEFTSIEAYQAYADYQDIMDLTEGIIQHVTKTVKGDGPINYQGTEIKINEPFK 356

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      ID    +              AQ+  + +    T    I +    E 
Sbjct: 357 RVHMVDAVKEITGIDFWKEMT------LEEAQALAQEKNVPLEKHFTTVGHIINAFFEEF 410

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 411 VEDT--LIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFIMTKEYANAFTELNDPIDQL 468

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +   K+   +E   +D D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 469 SRFEAQASAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 528

Query: 345 TPFSQ 349
            P  +
Sbjct: 529 FPTMK 533


>gi|329121809|ref|ZP_08250425.1| lysine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327468082|gb|EGF13570.1| lysine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 500

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 170/366 (46%), Gaps = 29/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR R              +KR  + +++R+++ ++ F+E+++ 
Sbjct: 139 LRPMPEKWHGLTDKEQRYRMRYVDLICNPQVKDTFIKRTKMLNAIRKWYTDHGFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + R F T L   + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 199 VLQPLYGGA-NARPFVTHL---NAMDMTMYLRIAPELYLKRLVVGGIDRVFEITRNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+   E  +     I+   A +      F ++ V  +      
Sbjct: 255 GMDAKHNPEFTAMESYQAYGDIEDAIHQTEEIVAECARICYGSTKFVYEGVELDVTPPWP 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T++EA  +Y   D                   A +  +     +    I + +  E +
Sbjct: 315 RLTMSEAVKKYTGEDFDAA------KTLEEARAIADRLNVEYGEYEGPGKILADVFDEYV 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     + R+P   S L+ +   D RFT RFE Y    EL N   E+ DPI+QR 
Sbjct: 369 EDK--LVQPIHITRHPIEVSPLSKLSADDHRFTDRFESYIFTRELANGFSEINDPIDQRK 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ ++    +E +P+DEDF+  L   MP + G+ +G DRL ML+TG+++I +VI+ 
Sbjct: 427 RFEIQLADRD--DDEAHPMDEDFIRSLEYGMPPTGGLGIGLDRLFMLMTGSHSIRDVIFF 484

Query: 346 PFSQSN 351
           P  +  
Sbjct: 485 PTMKPE 490


>gi|149010667|ref|ZP_01832038.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|303255869|ref|ZP_07341910.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259976|ref|ZP_07345950.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261382|ref|ZP_07347330.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264049|ref|ZP_07349970.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266941|ref|ZP_07352817.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269235|ref|ZP_07355011.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|147765148|gb|EDK72077.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|302597253|gb|EFL64358.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302637516|gb|EFL68003.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302638895|gb|EFL69356.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641242|gb|EFL71613.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643515|gb|EFL73786.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646454|gb|EFL76680.1| lysyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 496

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINKPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RVHMVDAIREITGVDFWQDMT------LEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|238922489|ref|YP_002936002.1| lysyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238874161|gb|ACR73868.1| lysyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 537

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 101/365 (27%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R +     F+E+++ 
Sbjct: 182 LQILPEKFHGLTDTDTRYRQRYVDLIMNQESKEVFIKRSQILKEIRNFLAGRDFMEVETP 241

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 242 MLVSNAGGAA-ARPFETHY---NALNEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 297

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+   ++ R  A +V      S+  V  +      
Sbjct: 298 GVDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGSTKISYNGVEIDLGKPFA 357

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA +D          PD       A +  I         DI +    E  
Sbjct: 358 RMTMIDAIKKYAGVDFDQV------PDDAAAKKLADEHHIEYEERHKKGDIVNLFFEEYC 411

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P+DP   +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 412 EKE--LIQPTFIMDHPIEISPLTKKKPSDPTKVERFELFCNTWEMCNAYSELNDPIDQRE 469

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +        +E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 470 RFAAQDANAAAGDDEAEHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLF 529

Query: 346 PFSQS 350
           P  +S
Sbjct: 530 PTMKS 534


>gi|322376864|ref|ZP_08051357.1| lysine--tRNA ligase [Streptococcus sp. M334]
 gi|321282671|gb|EFX59678.1| lysine--tRNA ligase [Streptococcus sp. M334]
          Length = 496

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 152/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R +  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRFLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        D        + A++      H      I +    E +
Sbjct: 320 RVHMVDAIKEITGVDFWQ-----DMTLEEAKSIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|255964979|ref|NP_345214.3| lysyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|14972186|gb|AAK74854.1| lysyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 491

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 139 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 199 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 255 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 315 RVHMVDAIREITGVDFWQDMT------LEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEF 368

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 369 VEET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQL 426

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 427 SRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 486

Query: 345 TPFSQ 349
            P  +
Sbjct: 487 FPTMK 491


>gi|269925130|ref|YP_003321753.1| lysyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269788790|gb|ACZ40931.1| lysyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 497

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 163/369 (44%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +     D    YR+R              +KR  I SS+R Y  +  FIE+++ 
Sbjct: 140 LNPLPDKWHGLEDVEKRYRQRYLDLMVNPEVRDVFIKRAKIISSVRRYLDDLGFIEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  +  + F+T     + + +  YL+ + E   K+LL  G EK++     +RN 
Sbjct: 200 VLQPLYGGAS-AKPFTTYY---NALDQTFYLRIATELYLKRLLVGGIEKVYEIGKDFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  Y  +M     +I   A    Q    +++    +      
Sbjct: 256 GLSTKHNPEFTMMELYQAYADYNSIMDLVEKLITFTASNVLQTLKITYRGHEIDLTPPWR 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       ID     D+ D      L    ++AGI +    T + +   +L    
Sbjct: 316 RLPLRDVVLNATGIDFYALRDDAD------LAEAIRKAGIELRPGATRAQMIDELLDN-- 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  YP   S  A     +P  T+RFE++   +E+ NA  EL DPI+Q  
Sbjct: 368 -SEHELIQPTFVIDYPVELSPFAKRKEDNPELTERFEVFIGGMEIGNAFTELNDPIDQAR 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++  +     E  P DEDF+  L   MP + G+ +G DRLVML+T   +I +VI  
Sbjct: 427 RFQAQLTNRTP-DGEENPYDEDFIQALMYGMPPTGGLGIGIDRLVMLLTDRPSIRDVILF 485

Query: 346 PFSQSNQEE 354
           P  ++   E
Sbjct: 486 PHLRTRIGE 494


>gi|169612822|ref|XP_001799828.1| hypothetical protein SNOG_09538 [Phaeosphaeria nodorum SN15]
 gi|160702592|gb|EAT82803.2| hypothetical protein SNOG_09538 [Phaeosphaeria nodorum SN15]
          Length = 609

 Score =  315 bits (807), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 89/374 (23%), Positives = 153/374 (40%), Gaps = 26/374 (6%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++ +  +D   R              R   + R+ I   +R+Y  E  F+E+ + 
Sbjct: 215 LRMLPTEHFGYKDQEQRHRNRYLDLIMNDSTRNTFITRSKIVKYVRKYLDERDFLEVQTP 274

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K+L+  G E+++     +RN 
Sbjct: 275 MMNKIAGGAT-AKPFKT---YHNELDMELFLRIAPELYLKELVVGGLERVYEMGRQFRNE 330

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+  Y+ +M     ++    +       +  +         N 
Sbjct: 331 GIDLTHNPEFTTCEFYMAYADYKDVMDMTEEMVSELVKEVTGSYETTFHTQSGEEYKVNW 390

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                 + +  A             +         L    ++  +  +   T + +  ++
Sbjct: 391 ARPWRKVEMIPALEEAVGEKFPPANELHTAETNEFLKRVLKKVKVDCSEPRTNARMIDKL 450

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +   P   +RFE + C  E+CNA  EL DP
Sbjct: 451 VGEFIEETA--INPTFIVGHPEVMSPLAKYHRDIPGLCERFEAFVCKKEICNAYTELNDP 508

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K +   E   IDE F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 509 FDQRLRFEEQANQKDQGDEEAQLIDETFCQSLEYGLPPTGGWGMGIDRLVMFLTDNYSIK 568

Query: 341 EVIWTPFSQSNQEE 354
           EV+  PF +   EE
Sbjct: 569 EVLTFPFMKDVVEE 582


>gi|296125772|ref|YP_003633024.1| lysyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296017588|gb|ADG70825.1| lysyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 507

 Score =  315 bits (807), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 85/367 (23%), Positives = 171/367 (46%), Gaps = 30/367 (8%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +     D    YR+R              +KR+ + S++RE  +E+ F+E+++ 
Sbjct: 149 LNPLPEKFHGLTDTELRYRQRYVDLIMNDDVKEAFIKRSKMISAIREVMIEHNFLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   LYL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHPLIGGA-KAKPFVTH---HNTLDMTLYLRIAPELYLKRLVVGGFDRVFELNRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPE 166
                H PEFTM+E Y A+ ++ ++M+   ++        N K  S +++   N      
Sbjct: 265 GISTRHNPEFTMMEAYMAYANFYKVMELVEDVFSKVCYKLNGKYTSVYKDYEINFKPPFA 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILI 223
            + + +    ++ +D      +           +A+  G+ +       T  ++   +  
Sbjct: 325 RVPMVDLVKEHSGLDFNAIESD------DEAIEKAKSIGVEIDTSKTKPTKWEVMVAVFE 378

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           +++E    +   T +  YP   S L+  YP +P  T+R+EL+   +EL N   EL DP++
Sbjct: 379 DRVEEK--LIQPTFVINYPKAVSPLSKSYPDNPDITERYELFIGGMELSNGFSELNDPVD 436

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RFE++++ K +  +ET  +D D++  L   +P + G+ +G DR+ +L   A +I + 
Sbjct: 437 QKERFEEQLKAKARGEDETMDMDLDYINALEYGLPPTGGLGIGIDRMAILFLNAASIRDT 496

Query: 343 IWTPFSQ 349
           I  P  +
Sbjct: 497 ILFPQMR 503


>gi|219849235|ref|YP_002463668.1| lysyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219543494|gb|ACL25232.1| lysyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 496

 Score =  315 bits (807), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 158/364 (43%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++  P +    +D   R             RR     R  + S++R    +  F+E+++ 
Sbjct: 138 INPPPEKWAGLQDVEERHRQRYLDLIVNRERRDIFRARAQVMSTMRRVLDDRGFLEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + + + LYL+ + E   K+L+  G   ++     +RN 
Sbjct: 198 VLQPIYGGAA-ARPFVT---YHNALGQNLYLRIATELYLKRLIVGGFPGVYEIGKNFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  Y  +M     ++      V      S+Q    +      
Sbjct: 254 GVDRSHNPEFTMMECYQAYADYHAMMTLVEEMLGEICLAVHGTTTISYQGRELDLRPPWP 313

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+A      ID+          D   L+      G+RV    +W+     +  E +
Sbjct: 314 RIAMADAIVERTGIDI------TRHTDLDSLHAAIADRGLRVDRKTSWAKQVDELFSEFV 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P+  +   T +  YP   S LA   P  P FT+RFE +   +E+ NA  EL DP +Q  
Sbjct: 368 QPH--LFQPTFIIDYPVAMSPLAKRIPGRPDFTERFEAFIAGMEIGNAFTELNDPFDQEE 425

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++       E + +DEDF+  L   MP + G+ +G DRLVM++T   +I EVI  
Sbjct: 426 RFREQLRAFAAGDEEAHQMDEDFINALRYGMPPTGGLGIGIDRLVMVLTDQASIREVILF 485

Query: 346 PFSQ 349
           P  +
Sbjct: 486 PHLR 489


>gi|148997215|ref|ZP_01824869.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168575371|ref|ZP_02721307.1| lysyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307067319|ref|YP_003876285.1| Lysyl-tRNA synthetase (class II) [Streptococcus pneumoniae AP200]
 gi|147756915|gb|EDK63955.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183578679|gb|EDT99207.1| lysyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306408856|gb|ADM84283.1| Lysyl-tRNA synthetase (class II) [Streptococcus pneumoniae AP200]
          Length = 496

 Score =  315 bits (807), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 152/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        D        + A++      H      I +    E +
Sbjct: 320 RVHMVDAIREITGVDFWQ-----DMTLEEAKVIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|255087702|ref|XP_002505774.1| predicted protein [Micromonas sp. RCC299]
 gi|226521044|gb|ACO67032.1| predicted protein [Micromonas sp. RCC299]
          Length = 667

 Score =  315 bits (807), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 93/375 (24%), Positives = 158/375 (42%), Gaps = 27/375 (7%)

Query: 1   MHQIP-SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P      +++  YR+R              + R+ +  S+R+Y  +  F+E+++  
Sbjct: 206 LHMLPGFSGLKDQETRYRKRYLDLIMNPEVRDIFITRSNVIRSIRKYLDDKDFVEVETPM 265

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +   PG  T  + F T     + +   LY++ +PE   K+L+  G ++++     +RN  
Sbjct: 266 MNMIPGGAT-AKPFITH---HNDLDMTLYMRIAPELYLKELVVGGMDRVYEIGRQFRNEG 321

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT  E+Y A+  YE LMK    +I               + N      P  I
Sbjct: 322 IDMTHNPEFTTCEFYMAYADYEDLMKMTEELISGMVLKLKGSYKIQYHANGPD-EPPVEI 380

Query: 169 TVAEAFARYANI-------DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                F R++ I       D+   +          L    ++ G   A   T   +   +
Sbjct: 381 DFTPPFKRFSMIADLEKALDIKIPMPLESDECNAFLKATVERVGSECALPHTTPRLLDTL 440

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + + +E          +  +P   S LA  + + P  T+RFEL+    E+CNA  EL DP
Sbjct: 441 VGDYLETQCL--NPGFICDHPKIMSPLAKYHRSLPDMTERFELFVNKREVCNAYTELNDP 498

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           I QR RF  + ++K    +E   +DE F   L   +P + G  +G DRL M++T   NI 
Sbjct: 499 IVQRERFADQAKQKAAGDDEAMFVDETFCESLEYGLPPTGGWGIGVDRLTMMLTDTANIK 558

Query: 341 EVIWTPFSQSNQEEI 355
           EV+  P  +     +
Sbjct: 559 EVLLFPAMKPEDNAV 573


>gi|315607902|ref|ZP_07882895.1| lysine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250371|gb|EFU30367.1| lysine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 602

 Score =  315 bits (807), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 92/376 (24%), Positives = 154/376 (40%), Gaps = 35/376 (9%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +   R+R              LKR  +  ++R +F E  
Sbjct: 160 LKPLPVVKYKDGVAYDKFDDPEMRARQRYVDLVVNEGVKDTFLKRATVLRTMRRFFDEAG 219

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++ +LQ   G  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 220 YTEVETPTLQSIAGGAS-ARPFITHF---NALNVDMYMRIATELYLKRLIVGGFEGVYEI 275

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     ++       N         N  
Sbjct: 276 GKNFRNEGMDKYHNPEFTCMELYVQYKDYNWMMAFTERLLETICTAVNGTTEVKNGDNVI 335

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIF 218
            F      + + EA       DL       ++ +  +  +  +   +  +        + 
Sbjct: 336 SFKAPFRRLPILEAIKEKTGFDLS------ERSEEEIRKIATEDLKMETIDESFGKGKLI 389

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  EL
Sbjct: 390 DEIFGEFCE--GSFIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSEL 447

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q  RF+++MQ   K  +E   ID+DFL  L   MP +SGI +G DRL ML+ G  
Sbjct: 448 NDPIDQEERFKEQMQLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLCMLMIGKE 507

Query: 338 NINEVIWTPFSQSNQE 353
           NI E++  P  +   +
Sbjct: 508 NIQEIMLFPQMKPEAK 523


>gi|307709178|ref|ZP_07645637.1| lysyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307620124|gb|EFN99241.1| lysyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 496

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMT------LEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|284043143|ref|YP_003393483.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283947364|gb|ADB50108.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 491

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 102/363 (28%), Positives = 164/363 (45%), Gaps = 32/363 (8%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +   P +    +D   R              R   + R  I +++R +  +  F+E+++ 
Sbjct: 146 LRPPPEKHHGVQDVETRFRHRELDLMSSEETRALFISRAKIIAAIRRFLDDAGFVEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + R F+T     + + + LYL+ + E   K+ +  G EK++     +RN 
Sbjct: 206 VLQPLYGGA-NARPFTTH---HNALDRELYLRIATELYLKRCIVGGLEKVYELGKDFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E+Y A+  Y  +      ++  AAE A        +   +       
Sbjct: 262 GVSHKHNPEFTMVEYYEAYADYLDVAARTEQLVAAAAEAAG------YSGEIDLAPPWRR 315

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            T+A + A    ID+          DR  L    ++ G+ V  +DTW+ +   ++ + +E
Sbjct: 316 ETLAGSIATRTGIDILAAR------DRDQLAAAMEEKGMNVPPEDTWAQLVDELVTKHVE 369

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P   +   T L  YP   S  A  +  D R  +RFE Y   +E+ NA  EL DP EQR R
Sbjct: 370 PT--LIEPTFLLDYPVELSPFAKRHRDDDRLVERFEAYVNGMEIANAFSELNDPDEQRRR 427

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE++    +   +E  P DE FL  L   MP + G+ +G DRLVML+TG  +I EV+  P
Sbjct: 428 FEQQRAHAEAGDDEAQPWDESFLQALEQGMPPTGGVGLGIDRLVMLLTGRRSIREVVLFP 487

Query: 347 FSQ 349
             +
Sbjct: 488 AMR 490


>gi|306829416|ref|ZP_07462606.1| lysine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428502|gb|EFM31592.1| lysine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 496

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 153/364 (42%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M    +II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEDIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        D        + A++      H      I +    E +
Sbjct: 320 RVHMVDAIKEITGVDFWQ-----DMTFEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|291526765|emb|CBK92351.1| Lysyl-tRNA synthetase (class II) [Eubacterium rectale M104/1]
          Length = 537

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 101/365 (27%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R +     F+E+++ 
Sbjct: 182 LQILPEKFHGLTDTDTRYRQRYVDLIMNQESKEVFIKRSQILKEIRNFLAGRDFMEVETP 241

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 242 MLVSNAGGAA-ARPFETHY---NALNEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 297

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+   ++ R  A +V      S+  V  +      
Sbjct: 298 GVDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGSTKISYNGVEIDLGKPFA 357

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +YA +D          PD       A +  I         DI +    E  
Sbjct: 358 RMTMIDAIKKYAGVDFDQV------PDDAAAKKLADEHHIEYEERHKKGDIVNLFFEEYC 411

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P+DP   +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 412 EKE--LIQPTFIMDHPIEISPLTKKKPSDPTKVERFELFCNTWEMCNAYSELNDPIDQRE 469

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +        +E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 470 RFAAQDANAAAGDDEAEHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDSQAIRDVLLF 529

Query: 346 PFSQS 350
           P  +S
Sbjct: 530 PTMKS 534


>gi|116627566|ref|YP_820185.1| lysyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122267836|sp|Q03LD3|SYK_STRTD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116100843|gb|ABJ65989.1| Lysyl-tRNA synthetase (class II) [Streptococcus thermophilus LMD-9]
          Length = 496

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 151/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLSDIETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDAQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-AKPFITH---HNAQNIDMVLRIALELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  +  +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTMIEVYQAYADFHDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            I + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RIHMVDAIKEITGVDFWQDMT------FEEAVALANEKHVPVEKHYTEVGQIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LTQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNAYSELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +   K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|257784989|ref|YP_003180206.1| lysyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473496|gb|ACV51615.1| lysyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 533

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 151/371 (40%), Gaps = 31/371 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +R+  YR+R               KR+ I S +R++   + ++E+++ 
Sbjct: 174 LRPLPEKFHGLTDREVRYRQRYVDLIMNPEVRDVFRKRSQIISIIRQFMEADGYMEVETP 233

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + + F T     + +    YL+ + E   K+LL  G E+++     +RN 
Sbjct: 234 VLQEILGGA-NAKPFITHY---NALNTEDYLRIATELPLKRLLVGGLERVYELGRQFRNE 289

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-----RCAAEVANQKIFSFQNVNCNPF 162
                H PEFT +E Y A+     + +   N+      +        ++ ++Q    +  
Sbjct: 290 GTDLTHNPEFTSMEAYAAYSDLAGMRELSQNLFQEIARKTCGCEEGHEVITYQGTEVDLS 349

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
                 ++AE  +     +L              L     +  I    +     +   I 
Sbjct: 350 GNWRVASLAEIASEVTGEELSIDTPV------EKLRAVLDRYEIEWNPEWQAGKLLFEIY 403

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
            E  E +  I   T +  YPA  S L      DPR T RFEL  C  E  NA  EL DP+
Sbjct: 404 DELGEKS--IVNPTFVCDYPAEVSPLTKRKADDPRLTDRFELIICGAEYANAYSELNDPV 461

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           +Q  RF  +M+ K++   E    D DF+  L   MP + GI  G DR++ML     +I +
Sbjct: 462 DQEERFAAQMEAKRQGDEEAMEYDYDFIRALEYGMPPAGGIGYGIDRMMMLFCDQPSIRD 521

Query: 342 VIWTPFSQSNQ 352
           V+  P  +  +
Sbjct: 522 VLLFPQLKPEK 532


>gi|225450809|ref|XP_002279658.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 597

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 83/365 (22%), Positives = 154/365 (42%), Gaps = 28/365 (7%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R  I S +R +     F+E+++  +   PG   
Sbjct: 226 LKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMMNMIPGGAA 285

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LY++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 286 -ARPFVTH---HNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 341

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A   Y  +M+    ++    +          +        +  +       I 
Sbjct: 342 TTCEFYMAFADYNDVMELTEKMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPFRRID 401

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E   + A++ +   L + +      L     +  I+     T + +  +++   +E  
Sbjct: 402 MIEDLEKMADLSIPKDLSSDEAN--KYLVDACLKFDIKCPPPQTTARLLDKLVGHFLEEA 459

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 T +  +P   S LA  + +    T+RFEL+    ELCNA  EL DP+ QR RF 
Sbjct: 460 CV--NPTFIINHPEIMSPLAKWHRSKQSLTERFELFVNKHELCNAYTELNDPVVQRQRFA 517

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +++++++   +E   +DE F   L   +P + G  +G DRL M++T + NI EV+  P  
Sbjct: 518 EQLKDRQSGDDEAMALDETFCMALEYGLPPTGGWGLGIDRLTMMLTDSQNIKEVLLFPAM 577

Query: 349 QSNQE 353
           +   E
Sbjct: 578 KPQDE 582


>gi|262368776|ref|ZP_06062105.1| lysyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262316454|gb|EEY97492.1| lysyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 508

 Score =  315 bits (806), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 162/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + S +R +  E +F+E+++ 
Sbjct: 152 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVSGIRAFLTEQRFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM+   N++ R A ++       +     +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMELTENMLERLALDILGSTDVPYGEEVYSFKGPFK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A +         +  DR  L     ++   +V        + + +  E 
Sbjct: 328 KISMFD-----AILAHNPQFTPENVNDREFLAKFVQEELKEQVKPGFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 383 VETQ--LRQPTFITEYPAETSPLARRNDHNPHITDRFEFFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D DF+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 441 ERFQAQVSEKDAGDDEAMHYDADFVEALEYGLPPTAGEGIGIDRLVMLFANAASIRDVIL 500

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 501 FPHMRHK 507


>gi|309778096|ref|ZP_07673034.1| lysine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914155|gb|EFP59957.1| lysine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 508

 Score =  315 bits (806), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 87/367 (23%), Positives = 154/367 (41%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    +RRR   L            R  I  +++ Y      +E+++ 
Sbjct: 154 LRPLPEKYHGLQDVEERFRRRYVDLITNENSKRIALTRPRIIRAIQNYLDGEGLVEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  +  R F T     + +  P YL+ + E   K+L+  G E ++     +RN 
Sbjct: 214 VLQPILGGAS-ARPFITH---HNTLDMPFYLRIATELPLKRLIVGGLEGVYEIGRLFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+     +M     ++   A +V      ++Q+   +  +  +
Sbjct: 270 GMDATHNPEFTTVEAYVAYSDLNGMMDLVEGLLNHVAEKVCGTTEIAWQDKTISLKAPFK 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +       +D    +              A++  I V         I +    + 
Sbjct: 330 RLHMVDGIKEACGVDFWQQMS------FEEACAIAKEHDIEVEKKHNSVGHIINLFFEKY 383

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRF  R+EL+    E  NA  EL DPI+QR
Sbjct: 384 VEET--LIQPTYVYGHPVEISPLAKKNAQDPRFADRYELFIDGHEYANAFSELNDPIDQR 441

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +++ +    +E   +D D++  L   +P + G+ +G DRLVML+T +  I EV+ 
Sbjct: 442 ERFENQLKLRDLGDDEANEMDTDYVEALEYGLPPTGGVGLGIDRLVMLLTNSQTIREVLL 501

Query: 345 TPFSQSN 351
            P  ++ 
Sbjct: 502 FPHMKNK 508


>gi|254572159|ref|XP_002493189.1| Lysyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238032987|emb|CAY71010.1| Lysyl-tRNA synthetase [Pichia pastoris GS115]
 gi|328352796|emb|CCA39194.1| lysyl-tRNA synthetase, class II [Pichia pastoris CBS 7435]
          Length = 588

 Score =  315 bits (806), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 83/373 (22%), Positives = 152/373 (40%), Gaps = 29/373 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R                R+ I S +R +F E  FIE+++ 
Sbjct: 212 LHMLPTDHFGFKDQEARYRKRYLDLIMNDATRDRFKIRSKIISYIRRFFDERDFIEVETP 271

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 272 MMNVIAGGAT-AKPFITH---HNDLNIDMYMRVAPELFLKELVVGGMDRVYEIGRQFRNE 327

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y+A+     LM+    +     +            +         
Sbjct: 328 GIDMTHNPEFTTCEFYQAYADVYDLMETTELLFSEMVKEITGDYKIPYQPDGPEGETLTL 387

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I + E   +  ++      +         L     +  +      T + +  
Sbjct: 388 DFSRPWKRINMIEELEKRFDVKFPPGDELHTAETGEFLKNILIKHKMDCPPPLTNARMLD 447

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++    E        T +  +P   S LA      P   +RFE++    E+ NA  EL 
Sbjct: 448 KLVG---ELEDTCTNPTFIFGHPQMMSPLAKYDREIPGLCERFEVFVATKEIANAYTELN 504

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR RFE++ ++K +  +E   IDE F   L   +P ++G   G DRL M +T +N 
Sbjct: 505 DPFDQRSRFEEQARQKDQGDDEAQLIDEIFCNALEYGLPPTAGWGCGIDRLAMFLTNSNT 564

Query: 339 INEVIWTPFSQSN 351
           I EV+  P  + +
Sbjct: 565 IREVLLFPTLKPD 577


>gi|195978451|ref|YP_002123695.1| lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975156|gb|ACG62682.1| Lysyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 501

 Score =  315 bits (806), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 148/365 (40%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 148 LRPLPEKFHGLTDIETIYRKRHLDLISNRSSFERFVTRSKMISEIRRYLDGLGFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 208 VLHNEAGGAA-ARPFITH---HNAQDIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M     II+ AA+    +    +Q          +
Sbjct: 264 GMDATHNPEFTSIEVYEAYADYLDMMNLTEGIIQHAAKAVRGEGPVDYQGTEIKINEPFK 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      ID       P+        L  ++      H  +   I +      +
Sbjct: 324 RIHMVDAIKEVTGIDFW-----PEMTFEEATALANEKHVPLEKHFTSVGHIINAFFEAFV 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 379 EDT--LIQPTFVYGHPVEVSPLAKKNPEDSRFTDRFELFIMTKEYANAFTELNDPIDQLS 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +   K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 437 RFKAQAAAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLLF 496

Query: 346 PFSQS 350
           P  + 
Sbjct: 497 PTMKP 501


>gi|148994403|ref|ZP_01823626.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168488382|ref|ZP_02712581.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147927239|gb|EDK78273.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183572998|gb|EDT93526.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332074509|gb|EGI84985.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 496

 Score =  315 bits (806), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 153/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q+         +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQSTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RVHMVDAIREITGVDFWQDMT------LEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|6320242|ref|NP_010322.1| Krs1p [Saccharomyces cerevisiae S288c]
 gi|135139|sp|P15180|SYKC_YEAST RecName: Full=Lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|171799|gb|AAA66916.1| lysyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1122359|emb|CAA92376.1| Krs1p [Saccharomyces cerevisiae]
 gi|1431484|emb|CAA98863.1| KRS1 [Saccharomyces cerevisiae]
 gi|190404990|gb|EDV08257.1| lysine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|207346823|gb|EDZ73202.1| YDR037Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259145284|emb|CAY78548.1| Krs1p [Saccharomyces cerevisiae EC1118]
 gi|285811061|tpg|DAA11885.1| TPA: Krs1p [Saccharomyces cerevisiae S288c]
          Length = 591

 Score =  315 bits (806), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 150/374 (40%), Gaps = 30/374 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I   +R +  + +FIE+++ 
Sbjct: 213 LHMLPADHFGFKDQETRYRKRYLDLIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 273 MMNVIAGGAT-AKPFITH---HNDLDMDMYMRIAPELFLKQLVVGGLDRVYEIGRQFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------N 158
                H PEFT  E+Y+A+     LM     +     +          +           
Sbjct: 329 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGSYIIKYHPDPADPAKELE 388

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     + I + E   +  N+   +            L        +      T + + 
Sbjct: 389 LNFSRPWKRINMIEELEKVFNVKFPSGDQLHTAETGEFLKKILVDNKLECPPPLTNARML 448

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 449 DKLVG---ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTEL 505

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE++ ++K +  +E   +DE F   L   +P + G   G DRL M +T +N
Sbjct: 506 NDPFDQRARFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSN 565

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  + +
Sbjct: 566 TIREVLLFPTLKPD 579


>gi|307705122|ref|ZP_07641999.1| lysyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307621318|gb|EFO00378.1| lysyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 496

 Score =  315 bits (806), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RVHMVDAIKEITGVDFWQDMT------LEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|154174894|ref|YP_001407789.1| lysyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|153793144|gb|EAT99544.2| lysyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 503

 Score =  315 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 85/370 (22%), Positives = 160/370 (43%), Gaps = 27/370 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R               KR++I S++R +  E  F+E+++ 
Sbjct: 141 ISPLPEKFHGLVDIETRYRQRYLDLIMNPEVRSDFKKRSIIISTIRRFIEEKGFLEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G   + + F T     + +    YL+ +PE   K+L+  G E ++     +RN 
Sbjct: 201 MMHPIAGGA-NAKPFVT---FHNALGVNRYLRIAPELYLKRLIVGGFEAVYDMNRNFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT +E+Y A+ +Y  LM     +     +  +  K+  F  +  +      
Sbjct: 257 GMDLTHNPEFTSIEFYWAYHTYHDLMGLTEELFNVLIDKLDLPKVIEFDGMQVDFSKPFA 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +   +A      +D           D+  +  + +  G           + + +    +
Sbjct: 317 RLNYKKALVEVGGLDP------QIIEDKDKILAKLKADGFEANAKLDLGHLQAELFDNYV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     +P   +RFEL+    EL N  +EL DP++Q +
Sbjct: 371 EEK--LIDPTFIIDYPISISPLSRRSDKNPEIAERFELFIAGRELANGFNELNDPVDQYN 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++ K    +E + +DED++  L   MP ++G  +G DRLVML+T   +I +V+  
Sbjct: 429 RFAAQIEAKNAGDDEAHEMDEDYVRALGYAMPPTAGEGIGIDRLVMLLTNKKSIRDVVLF 488

Query: 346 PFSQSNQEEI 355
           P  +  + EI
Sbjct: 489 PAMRPLKSEI 498


>gi|148989077|ref|ZP_01820477.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|221231516|ref|YP_002510668.1| lysyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225854225|ref|YP_002735737.1| lysyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|147925574|gb|EDK76651.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|220673976|emb|CAR68486.1| lysyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722991|gb|ACO18844.1| lysyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 496

 Score =  315 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RVHMVDAIREITGVDFWQDMT------LEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|331266480|ref|YP_004326110.1| lysyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683152|emb|CBZ00770.1| lysyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 496

 Score =  315 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 152/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        D        + A++      H      I +    E +
Sbjct: 320 RVHMVDAIKEITGVDFWQ-----DMTFEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|221194541|ref|ZP_03567598.1| lysyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185445|gb|EEE17835.1| lysyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 522

 Score =  315 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 153/371 (41%), Gaps = 31/371 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +R+  YR+R               KR+ I S +R++  ++ ++E+++ 
Sbjct: 156 LRPLPEKFHGLTDREVRYRQRYVDLIMNPEVRDVFRKRSQIISIIRQHMEDDGYMEVETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + + F T     + +    YL+ + E   K+L+  G E++F     +RN 
Sbjct: 216 VLQEILGGA-NAKPFITHY---NALNTENYLRIATELPLKRLIVGGLERVFEIGRQFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-----RCAAEVANQKIFSFQNVNCNPF 162
                H PEFT +E Y A+     + K    +      R     A  ++ +FQ    +  
Sbjct: 272 GTDLTHNPEFTSMEAYAAYSDLAGMRKLSQELFQDIARRACGCEAGHEVITFQGTEIDLS 331

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
            E    +++E  +     +L              L     +  I    +     +   I 
Sbjct: 332 GEWRMASLSEIASEVTGENLSIDTPV------EKLREVLDRFDIEWNVEWGAGKLLFEIY 385

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
            E  E +  I   T +  YPA  S L      DPR T RFEL     E  NA  EL DP+
Sbjct: 386 DELGEKS--IINPTFVCDYPAEVSPLTKRKDDDPRLTDRFELVIKGAEYANAYSELNDPV 443

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           +Q  RF  +M+ K++  +E    D DF+  L   MP + GI  G DR++ML     +I +
Sbjct: 444 DQEERFAAQMEAKRQGDDEAMEYDYDFIRALEYGMPPAGGIGYGIDRMIMLFCDQPSIRD 503

Query: 342 VIWTPFSQSNQ 352
           V+  P  +  +
Sbjct: 504 VLLFPQLRPEK 514


>gi|15902670|ref|NP_358220.1| lysyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116517090|ref|YP_816116.1| lysyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|148985286|ref|ZP_01818509.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|149005821|ref|ZP_01829560.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|168482937|ref|ZP_02707889.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168486793|ref|ZP_02711301.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|194397421|ref|YP_002037362.1| lysyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|225858528|ref|YP_002740038.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|307126899|ref|YP_003878930.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|39932186|sp|Q8CWS5|SYK_STRR6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|122278998|sp|Q04LI2|SYK_STRP2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710930|sp|B5E317|SYK_STRP4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|15458210|gb|AAK99430.1| Lysyl-tRNA synthetase (lysine--tRNA ligase) (LYSRS) [Streptococcus
           pneumoniae R6]
 gi|116077666|gb|ABJ55386.1| lysyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|147762761|gb|EDK69721.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147922484|gb|EDK73603.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|172043813|gb|EDT51859.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|183570273|gb|EDT90801.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|194357088|gb|ACF55536.1| lysyl-tRNA synthetase (classII) [Streptococcus pneumoniae G54]
 gi|225721906|gb|ACO17760.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|301799737|emb|CBW32303.1| lysyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|301801566|emb|CBW34262.1| lysyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|306483961|gb|ADM90830.1| lysyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|332077129|gb|EGI87591.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
 gi|332202581|gb|EGJ16650.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
 gi|332203870|gb|EGJ17937.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 496

 Score =  315 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RVHMVDAIREITGVDFWQDMT------LEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|29653775|ref|NP_819467.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154707035|ref|YP_001424981.1| lysyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|161830462|ref|YP_001596361.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|164686042|ref|ZP_01947471.2| lysyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165924116|ref|ZP_02219948.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212213083|ref|YP_002304019.1| lysyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212218959|ref|YP_002305746.1| lysyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|39932163|sp|Q83E97|SYK_COXBU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082957|sp|A9KEG1|SYK_COXBN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082958|sp|A9NBP7|SYK_COXBR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710886|sp|B6J8K2|SYK_COXB1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710887|sp|B6J1P6|SYK_COXB2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29541038|gb|AAO89981.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|154356321|gb|ABS77783.1| lysyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|161762329|gb|ABX77971.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|164601597|gb|EAX31910.2| lysyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165916439|gb|EDR35043.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|212011493|gb|ACJ18874.1| lysyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212013221|gb|ACJ20601.1| lysyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 498

 Score =  315 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 84/366 (22%), Positives = 156/366 (42%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  +R+R                R+ + + +R +  +  +IE+++ 
Sbjct: 144 LRPMPDKFHGLHDQEQRFRQRYLDLIVNESSRHLFQTRSQVIAQIRRFLDDRGYIEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   L+L+ +PE   K+L+  G EK++     +RN 
Sbjct: 204 MMHPLPGGAA-ARPFETH---HNAMNMDLFLRIAPELYLKRLVVGGFEKVYEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+ +YE +M    ++IR  AE     +   +Q V  +      
Sbjct: 260 GISTRHNPEFTMLEFYQAYATYEDMMMLTESMIRHLAEKIFGVMEIKYQGVRIDLNKPFP 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ +A  ++        +              A +  I          I + +  + +
Sbjct: 320 RLSLRDAILQF-----NPGITPDQIDHLETARELAHKYEIATPAHYGLGKIQTELFEKLV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  +P   S L+     +   T RFE Y    E+ N   EL DP +Q  
Sbjct: 375 EEK--LQQPIFITHFPKEVSPLSRANEENDFITDRFEFYVGGREIANGFSELNDPEDQAA 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++ +     E    DED++  L   +P ++G  +G DRLVML T   +I +VI  
Sbjct: 433 RFREQLKARNAGDLEAMSFDEDYITALEYGLPPTAGEGIGIDRLVMLFTDNASIRDVILF 492

Query: 346 PFSQSN 351
           P  +S 
Sbjct: 493 PLLRSK 498


>gi|153003984|ref|YP_001378309.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027557|gb|ABS25325.1| lysyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 520

 Score =  315 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 89/373 (23%), Positives = 158/373 (42%), Gaps = 24/373 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +     D    YR+R              +KR  I S++R +     ++E+++ 
Sbjct: 151 MRPLPEKWHGLTDVEQRYRQRYLDLVATPGVRDTFVKRARIVSTIRRFLDGRGYLEVETP 210

Query: 48  SLQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
           +L           R F T     + +   L L+ + E   K+L+  G ++++     WRN
Sbjct: 211 TLHKPEEAGGAAARPFETH---HNALDLDLKLRIATELHLKRLVVGGFDRVYEIGRIWRN 267

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEP 165
                 H PEFT +E+Y+A+ + E LM+    +    A       + +FQ    +     
Sbjct: 268 EGIDRRHNPEFTSIEFYQAYATAEDLMRLTEELFHALAVEVTGAPVVTFQGQAIDLTPPY 327

Query: 166 EYITVAEAFARYANIDLGTTLDN-----PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +++ +  AR   + +   L                        +  A   +  +  + 
Sbjct: 328 PRVSLVQEAARELGLSVEDALSGRGLAEALARAAARENESEDAWKLEQAAKRSPGEALAA 387

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +     EP L  +  + +  +P   S L+    +DPR   RFEL+A  +E  NA  EL D
Sbjct: 388 VFEVFGEPRLAKDRPSFVVDWPIETSPLSRRRDSDPRLVDRFELFAGGMECANAFSELND 447

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P++QR RFE ++  +     E  P DEDF+  L   MP ++G  +G DR+ ML+T + +I
Sbjct: 448 PVDQRARFEAQVNARAAGDEEAMPYDEDFVRALEHGMPPTAGEGIGIDRVAMLLTDSASI 507

Query: 340 NEVIWTPFSQSNQ 352
            +VI  P  ++ +
Sbjct: 508 RDVILFPLLKTRE 520


>gi|293365298|ref|ZP_06612015.1| lysine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307703838|ref|ZP_07640779.1| lysyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316748|gb|EFE57184.1| lysine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307622673|gb|EFO01669.1| lysyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 496

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 152/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        D        + A++      H      I +    E +
Sbjct: 320 RVHMVDAIKEITGVDFWQ-----DMTFEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|295099925|emb|CBK89014.1| Lysyl-tRNA synthetase (class II) [Eubacterium cylindroides T2-87]
          Length = 649

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 155/369 (42%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YRRR   L            R  I  +++ Y      +E+++ 
Sbjct: 139 LRPLPEKFHGLTDVEERYRRRYVDLIMNPEAKHIALTRPKIIRAIQHYLDGQGLVEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  +  R F T     + +    Y++ + E   K+L+  G E ++     +RN 
Sbjct: 199 VLQPILGGAS-ARPFVTH---HNTLDMDFYMRIATELPLKRLIVGGLEGVYEIGRLFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
               +H PEFT +E Y A+     +M     +    A  V      ++Q    +  +  +
Sbjct: 255 GMDAMHNPEFTTVEAYVAYSDLYGMMDLIEGLFDSVANEVLGTTEITYQGQQLSLKAPFK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEK 225
            I + +A      +D    +              A++  I V    ++   I +    + 
Sbjct: 315 RIHMVDAIKEACGVDFWKEMT------LDEAKALAKEHDIEVEKIHNSVGHIINLFFEKY 368

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    I   T +  +P   S LA     DPRF  R+EL+ C  E  NA  EL DPI+QR
Sbjct: 369 VEET--IVQPTFVYGHPTSISPLAKKNAEDPRFADRYELFICGHEYANAFSELNDPIDQR 426

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFEK+++ ++   +E   +D D++  L   MP + G+ +G DR VML+T    I EV+ 
Sbjct: 427 QRFEKQLELRELGDDEANEVDTDYVEALEYGMPPTGGVGLGIDRFVMLLTDQRTIREVLL 486

Query: 345 TPFSQSNQE 353
            P  +  ++
Sbjct: 487 FPHMKLTKD 495


>gi|322374407|ref|ZP_08048921.1| lysine--tRNA ligase [Streptococcus sp. C300]
 gi|321279907|gb|EFX56946.1| lysine--tRNA ligase [Streptococcus sp. C300]
          Length = 496

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 152/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        D        + A++      H      I +    E +
Sbjct: 320 RVHMVDAIKEITGVDFWQ-----DMTFEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDNRFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|149003320|ref|ZP_01828209.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|237650050|ref|ZP_04524302.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822721|ref|ZP_04598566.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758503|gb|EDK65501.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 496

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 152/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        D        + A++      H      I +    E +
Sbjct: 320 RVHMVDAIREITGVDFWQ-----DMTLEEAKTIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|151942029|gb|EDN60385.1| lysyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
          Length = 591

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 151/374 (40%), Gaps = 30/374 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I   +R++  + +FIE+++ 
Sbjct: 213 LHMLPADHFGFKDQETRYRKRYLDLIMNKDARNRFITRSEIIRYIRKFLDQRKFIEVETP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 273 MMNVIAGGAT-AKPFITH---HNDLDMDMYMRIAPELFLKQLVVGGLDRVYEIGRQFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------N 158
                H PEFT  E+Y+A+     LM     +     +          +           
Sbjct: 329 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGSYIIKYHPDPADPAKELE 388

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     + I + E   +  N+   +            L        +      T + + 
Sbjct: 389 LNFSRPWKRINMIEELEKVFNVKFPSGDQLHTAETGEFLKKVLADNKLECPPPLTNARML 448

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 449 DKLVG---ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTEL 505

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE++ ++K +  +E   +DE F   L   +P + G   G DRL M +T +N
Sbjct: 506 NDPFDQRARFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSN 565

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  + +
Sbjct: 566 TIREVLLFPTLKPD 579


>gi|111656835|ref|ZP_01407683.1| hypothetical protein SpneT_02001903 [Streptococcus pneumoniae
           TIGR4]
 gi|149020353|ref|ZP_01835245.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168492226|ref|ZP_02716369.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168492864|ref|ZP_02717007.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|39932232|sp|Q97RS9|SYK_STRPN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|147930655|gb|EDK81637.1| lysyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|183573509|gb|EDT94037.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183576861|gb|EDT97389.1| lysyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|332075995|gb|EGI86461.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 496

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RVHMVDAIREITGVDFWQDMT------LEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|312215932|emb|CBX95884.1| hypothetical protein [Leptosphaeria maculans]
          Length = 448

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 152/369 (41%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++ +  +D   R              R   + R+ I   +R+Y  E  F+E+ + 
Sbjct: 59  LRMLPTEHFGYKDQEQRHRNRFLDLIMNDTTRDTFITRSKIVKYVRKYLDERDFLEVQTP 118

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  R F T     + +   L+++ +PE   K+L+  G EK++     +RN 
Sbjct: 119 MMNKIAGGAT-ARPFKT---YHNELDMELFMRIAPELYLKQLVVGGLEKVYEIGRQFRNE 174

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+  Y  ++     ++    +       +  +       N N 
Sbjct: 175 GIDLTHNPEFTTCEFYMAYADYNDVLDMTEELVSGLVKEVTGGYETVYHTQSGETYNVNW 234

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                 + +  A             +         L    ++  +  +   T + +  ++
Sbjct: 235 ARPWRRVQMIPALEEATGEKFPPANELHTTETNEFLKRVLKKVNVDCSEPRTNARMIDKL 294

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        T +  +P   S LA  +   P   +RFE + C  E+CNA  EL DP
Sbjct: 295 VGEFIEETA--INPTFIVGHPEVMSPLAKYHRDIPGLCERFEAFVCKKEICNAYTELNDP 352

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++  +K +  +E   IDE F   L   +P + G  MG DRLVM +T   +I 
Sbjct: 353 FDQRLRFEEQANQKSQGDDEAQLIDETFCQALEYGLPPTGGWGMGIDRLVMFLTDHYSIK 412

Query: 341 EVIWTPFSQ 349
           EV+  PF +
Sbjct: 413 EVLTFPFMK 421


>gi|171682338|ref|XP_001906112.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941128|emb|CAP66778.1| unnamed protein product [Podospora anserina S mat+]
          Length = 619

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 85/373 (22%), Positives = 156/373 (41%), Gaps = 26/373 (6%)

Query: 1   MHQIPSQ--PWWNRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +PS   P+ + +   R            R  L +R+ +   +R++F E +FIE+++ 
Sbjct: 229 LHMLPSVRFPFADAEQRARMRYLDMLWNDRSRETLWQRSRMVRYIRDFFHERRFIEVETP 288

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T +  F T     + +   +Y++ +PE   KK++     K+F     +RN 
Sbjct: 289 MMHAIAGGATAL-PFITH---HNDLDIDMYMRVAPELFLKKMIVGQFGKVFEMGKNFRNE 344

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF------QNVNCNP 161
                H PEFT +E+Y A+     LM     ++    +       +       +    N 
Sbjct: 345 GVDLTHNPEFTSIEFYWAYADMYDLMNITEELVSSLVKHLTGGYVTKFTNQHGEEYTVNW 404

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    + +  A           + +         L    ++ G+      T + +  ++
Sbjct: 405 EAPWRRVEMIPALEEATGEKFPPSEELHTDETNAFLQRVCKKMGVECPPPLTNARMIDKL 464

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E IE        T +  +P   S LA  + +     +RFE + C  E+ NA  EL +P
Sbjct: 465 TGEFIEETCV--NPTFILEHPQMMSPLAKYHRSKKGLCERFEAFVCKKEIANAYTELNNP 522

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   +DE FL  L   +P + G  +G DRL M +T   +I 
Sbjct: 523 FDQRLRFEEQARQKDQGDDEAQLVDESFLNALEYGLPPTGGWGLGIDRLAMFLTNNYSIR 582

Query: 341 EVIWTPFSQSNQE 353
           EV+  PF +  + 
Sbjct: 583 EVLAFPFLREEKN 595


>gi|50084268|ref|YP_045778.1| lysyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|2501016|sp|Q43990|SYK_ACIAD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1359473|emb|CAA86924.1| lysyl-tRNA-synthase [Acinetobacter sp. ADP1]
 gi|49530244|emb|CAG67956.1| lysyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 509

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 152 LRPLPDKFHGLTDTEAKYRKRYLDLIVNEETRKTFEIRAQVVAGIRAFLTNQRFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  + F T     + +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MMHVIPGGAS-AQPFVTH---HNALDMELYLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM+   N++ + A ++       + +   +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMQLTENMLEKLALDILGTTDVPYGDEVYSFKGPFK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ-AGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L    Q     +V        + + +  E 
Sbjct: 328 KISMFD-----AILEHNPDFTPENVNDREFLAKFTQDVLKEQVKPGFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D DF+  L   +P ++G  +G DRLVM+   A +I +V+ 
Sbjct: 441 ERFQAQVAEKDAGDDEAMHYDADFIEALEYGLPPTAGQGIGIDRLVMIFANAPSIRDVLL 500

Query: 345 TPFSQ 349
            P  +
Sbjct: 501 FPHMR 505


>gi|322387891|ref|ZP_08061498.1| lysine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321141164|gb|EFX36662.1| lysine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 496

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 150/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+  A+         +Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHVAKAVKGDAPVIYQGTEIKLNEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        D        + A++      H      I +    E +
Sbjct: 320 RVHMVDAIKEITGVDFWQ-----DMTFEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|301793881|emb|CBW36276.1| lysyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|332204726|gb|EGJ18791.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 496

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 152/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        D        + A++      H      I +    E +
Sbjct: 320 RVHMVDAIREITGVDFWQ-----DMTLEEAKTIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|323309512|gb|EGA62723.1| Krs1p [Saccharomyces cerevisiae FostersO]
          Length = 591

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 150/374 (40%), Gaps = 30/374 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I   +R +  + +FIE+++ 
Sbjct: 213 LHMLPADHFGFKDQETRYRKRYLDLIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 273 MMNVIAGGAT-AKPFITH---HNDLDMDMYMRIAPELFLKQLVVGGLDRVYEIGRQFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------N 158
                H PEFT  E+Y+A+     LM     +     +          +           
Sbjct: 329 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGSYIIKYHPDPADPAKELE 388

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     + I + E   +  N+   +            L        +      T + + 
Sbjct: 389 LNFSRPWKRINMIEELEKVFNVKFPSGDQLHTAETGEFLKKVLVDNKLECPPPLTNARML 448

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 449 DKLVG---ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTEL 505

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE++ ++K +  +E   +DE F   L   +P + G   G DRL M +T +N
Sbjct: 506 NDPFDQRARFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSN 565

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  + +
Sbjct: 566 TIREVLLFPTLKPD 579


>gi|306825318|ref|ZP_07458660.1| lysine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304432754|gb|EFM35728.1| lysine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 496

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 152/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y   + F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFDRFVTRSKIISEIRRYLDGHDFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-AKPFITH---HNAQNIDMVLRIALELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  +  +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTMIEVYQAYADFHDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        D      + L  ++      H      I +    E +
Sbjct: 320 RVHMVDAIKEITGVDFWQ-----DLTFEEAVALANEKHVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAYSELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|262375839|ref|ZP_06069071.1| lysyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309442|gb|EEY90573.1| lysyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 509

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 162/367 (44%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +  E +++E+++ 
Sbjct: 152 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTEKRYMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +   L+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MMHVIPGGAS-ARPFETH---HNALDMSLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM+    ++ R A ++       + +   +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMELTEQMLERLAIDILGTTDVPYGDEVYSFKGPFK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++   +V        + + +  E 
Sbjct: 328 KISMFD-----AILENNPQFTPENVNDREFLAKFLQEELKEQVKPGFGLGKLQTMVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITEYPAETSPLARRNDHNPHITDRFEFFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D DF+  L   +P ++G  +G DRLVM+   A +I +VI 
Sbjct: 441 ERFQAQVAEKDAGDDEAMHYDADFVEALEYGLPPTAGEGIGIDRLVMIFANAASIRDVIL 500

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 501 FPHMRHK 507


>gi|300123418|emb|CBK24691.2| unnamed protein product [Blastocystis hominis]
          Length = 574

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 84/375 (22%), Positives = 157/375 (41%), Gaps = 30/375 (8%)

Query: 1   MHQIPSQPWWN--RDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P         +  YR R              + R+ +   +R +  E  FIE+++ 
Sbjct: 201 LHMLPKPFIGLTNPETRYRMRYLDLIMNPSVRDKFIIRSRVIRGIRSFLDERGFIEVETP 260

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   LY++ +PE   K+L+  G ++++     +RN 
Sbjct: 261 MMNMHAGGAT-AKPFITH---HNDLNLDLYMRIAPELYLKQLVIGGMDRVYELGRQFRNE 316

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--------NC 159
                H PEFT  E+Y A+     +M+    ++    +          +           
Sbjct: 317 SIDMTHNPEFTTCEFYMAYADVYDIMELTEQMVSGIVKDITGGYKIQYHPQGKDADPVEI 376

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +        ++ E   + + + +   L++ +  D   L    ++  I      T   +  
Sbjct: 377 DFTPPWPRYSMIEELEKQSGLKIPMPLESQETYD--FLVATCKELKIECTPPLTTPRLLD 434

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++   +EP       + +  +PA  S LA  + + P   +RFEL+    EL NA  EL 
Sbjct: 435 KLVEHFVEPLCL--NPSFVCDHPAICSPLAKYHRSKPGLCERFELFVNYTELANAYTELN 492

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           +P+ QR RF ++ ++K K   E   +DE+F   L   +P + G  +G DRL M +T +NN
Sbjct: 493 NPMVQRDRFMQQARDKSKGDEEAQCLDEEFCTALEHGLPPTGGWGLGVDRLTMFLTDSNN 552

Query: 339 INEVIWTPFSQSNQE 353
           I EV+  P  +  +E
Sbjct: 553 IKEVLLFPAMKPIEE 567


>gi|50364845|ref|YP_053270.1| lysyl tRNA synthetase [Mesoplasma florum L1]
 gi|50363401|gb|AAT75386.1| lysyl tRNA synthetase [Mesoplasma florum L1]
          Length = 499

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 90/367 (24%), Positives = 154/367 (41%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR                R  I  ++++   E  ++E+++ 
Sbjct: 144 LRPLPDKHAGIQDIEEKYRRRYVDLITNPESKRVFQARTKIIRTMQQILDERGYMEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +YL+ + E   K+L+  G + ++     +RN 
Sbjct: 204 ILHSVKGGAA-AKPFITHY---NALDVDVYLRIATELHLKRLIVGGFDGVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT LE Y A+E    LM     I R      N   +  +     +     +
Sbjct: 260 GMSTRHNPEFTSLELYVAYEDMFFLMDLTEEIFRKCNAAVNESSVIEYGGHKLDLSKPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
            + + +   +   +D    +   +  +       A++  + V  H+ T   I +    E 
Sbjct: 320 RLHMVDGIKQVTGVDFWKEMTVEEALE------LAKKHNVHVEKHNYTVGHIINLFYEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    I   T +  +P   S L+     D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEST--IIEPTFVYGHPKEISPLSKSNAEDSRFTDRFELFIVGREYANAFSELNDPIDQY 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF ++++E     +E   +D DF+  L   MP ++GI  G DRLVML+T + +I +V+ 
Sbjct: 432 DRFNEQIKEAAAGNDEATEMDIDFIEALEHAMPPTAGIGFGIDRLVMLLTNSESIKDVLL 491

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 492 FPQLKPR 498


>gi|169633913|ref|YP_001707649.1| lysyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169796805|ref|YP_001714598.1| lysyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|215484283|ref|YP_002326510.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301345962|ref|ZP_07226703.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301512378|ref|ZP_07237615.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301595787|ref|ZP_07240795.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|226737088|sp|B7GXW0|SYK_ACIB3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238688078|sp|B0V9L5|SYK_ACIBY RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|238688250|sp|B0VSE0|SYK_ACIBS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|169149732|emb|CAM87623.1| lysyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|169152705|emb|CAP01708.1| lysyl-tRNA synthetase [Acinetobacter baumannii]
 gi|213987992|gb|ACJ58291.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
          Length = 509

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 152 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    N++ + A ++       +Q    +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGTTDVPYQGEVFSFKGPFK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++    V        + + +  E 
Sbjct: 328 KISMFD-----AILENNPQFTPENVGDREFLAKFVREELKEEVKPGFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D +F+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 441 ERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVIL 500

Query: 345 TPFSQ 349
            P  +
Sbjct: 501 FPHMR 505


>gi|219110245|ref|XP_002176874.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411409|gb|EEC51337.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 485

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 156/365 (42%), Gaps = 22/365 (6%)

Query: 3   QIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +    +D    YR R               KR +I S LR    +  F+EI++ +L
Sbjct: 124 PLPDKYHGLQDVTKRYRSRHLDMISNPGVRETFRKRALITSKLRRMLDDKGFLEIETPTL 183

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G     + F T     + +   L L+ + E   K+L+  G ++++     +RN   
Sbjct: 184 HTQSGGA-EAKPFET---YHNSMDMQLTLRIATELHLKRLIVGGFDRVYEVGRIFRNEGI 239

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E Y+A+  Y+ +M     ++   AE V       +     +       +
Sbjct: 240 STRHNPEFTSVELYQAYADYDDMMNLTEELVCTIAEEVCGSLSIPYGEHMVSLERPWRRV 299

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEKIE 227
           T+ +           + LD+      +     A  AG+      +T   + +    E  E
Sbjct: 300 TMHDIVKEEMPDFDFSALDSQLPESLNTAKAAAIAAGVPNVQGLNTIGYVLNACFEELCE 359

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P   +   T +  YP   S LA  +   P  T+RFEL+A   E  NA  EL DPI+QR R
Sbjct: 360 PK--LIQPTFVIDYPVDVSPLAKRHRNKPGLTERFELFAVGREHANAFSELTDPIDQRER 417

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE +  +K     E   +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI  P
Sbjct: 418 FEAQAAKKAAGDEEACDVDEDFLQALEQGMPPTGGLGIGIDRLVMLLTNSPSIRDVIAFP 477

Query: 347 FSQSN 351
             + +
Sbjct: 478 LLRPD 482


>gi|77409348|ref|ZP_00786050.1| lysyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77172050|gb|EAO75217.1| lysyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 496

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R +   N F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRDSFDRFVTRSKIISEIRRFMDSNGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAS-ARPFITH---HNAQDIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     II+   +        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEAYQAYADYQDIMDLTEGIIQHVTKTVKGDGPINYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A     +ID    +              AQ+  + +    T    I +    E 
Sbjct: 320 RVHMVDAVKEITDIDFWKEMT------LEEAQALAQEKNVPLEKHFTTVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEDT--LIQPTFVFGHPVEVSPLAKKNDTDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +   K+   +E   +D D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQASAKELGDDEATGVDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|270292827|ref|ZP_06199038.1| lysine--tRNA ligase [Streptococcus sp. M143]
 gi|270278806|gb|EFA24652.1| lysine--tRNA ligase [Streptococcus sp. M143]
          Length = 496

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 152/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        D        + A++      H      I +    E +
Sbjct: 320 RVHMVDAIKEITGVDFWQ-----DMTFEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDERFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|294933203|ref|XP_002780649.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239890583|gb|EER12444.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 622

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 89/372 (23%), Positives = 151/372 (40%), Gaps = 30/372 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           MH +P   +  +D    +R+R               +R+ I   +R +     F+E+++ 
Sbjct: 244 MHMLPKAQFGLKDQEVRFRQRYLDLIMNPHVRETFQRRSQIIGYIRSFLGNRGFMEVETP 303

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  + F T     + +   LY++ +PE   K L+  G +++F     +RN 
Sbjct: 304 MMNMIAGGAS-AKPFITH---HNELDLDLYMRIAPELYLKMLVVGGLDRVFEIGKNFRNE 359

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y A+  Y  LM     +I    +          +           
Sbjct: 360 GIDLTHNPEFTSCEFYMAYADYNDLMNMTEEMISGMVKSIFGTYMVTFHPEGPEGPAKEI 419

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           N     + +++ E   R A + L    D   +  R  L   A +  +      T + +  
Sbjct: 420 NFAPPWKRVSMVEEIERQAGVSLN--RDFAAEEARQQLDDLASKFDVECPAPRTSARLLD 477

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           ++    IE    I   T +  +P   S LA  + + P  T+RFE +    E+CNA  EL 
Sbjct: 478 KLCGFFIEDK--IVSPTFITEHPQIMSPLAKWHRSKPGLTERFEGFIMGKEICNAYTELN 535

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP++Q   F  + Q K +  +E   +D  F+  L   +P + G  +G DRL M +T   N
Sbjct: 536 DPVKQLACFTAQAQAKAEGDDEACDVDNGFVTALEYGLPPTGGWGLGVDRLCMFLTDNIN 595

Query: 339 INEVIWTPFSQS 350
           I EVI  P  + 
Sbjct: 596 IKEVILYPAMKP 607


>gi|319779399|ref|YP_004130312.1| Lysyl-tRNA synthetase (class II) [Taylorella equigenitalis MCE9]
 gi|317109423|gb|ADU92169.1| Lysyl-tRNA synthetase (class II) [Taylorella equigenitalis MCE9]
          Length = 513

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 159/366 (43%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+   + LR+   E+ F+E+++ 
Sbjct: 158 LRPLPDKFHGLSDQELRYRQRYVDLIMNESTRETFRIRSQAMTHLRQIMSEHGFLEVETP 217

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  T  + F T     + +   +YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 218 MLHPIPGGAT-AKPFVTH---HNALDMDMYLRVAPELYLKRLVVGGFDRVFEINRNFRNE 273

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  YE +M     ++R  A        F  Q    +     E
Sbjct: 274 GVSPRHNPEFTMMEFYAAYTDYEWMMDFTEKLLREIAVRTLGSAQFFHQGRALSFEEPFE 333

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y +      L + D     L+ L+A               +   +  E +
Sbjct: 334 RLTMVEAILKYCDKYTEAQLQDADFIRNELIALKAPAL-----DSMGLGALQLALFEETV 388

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    A+   T+RFEL+    E+ N   EL DP +Q  
Sbjct: 389 ES--LLWNPTFIVDYPVEVSPLARASDANHDITERFELFITGREIANGFSELNDPEDQSA 446

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++++ K     E    D D++  L   MP + G  +G DRL+ML+T ++ I +V+  
Sbjct: 447 RFMEQVKAKDAGDEEAMYYDSDYIRALEYGMPYAGGCGIGIDRLMMLLTDSSTIRDVLLF 506

Query: 346 PFSQSN 351
           P  +  
Sbjct: 507 PHLRKE 512


>gi|313679937|ref|YP_004057676.1| lysyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152652|gb|ADR36503.1| lysyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 498

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 157/369 (42%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R  +   +R +  E  F+E+++ 
Sbjct: 136 LRPLPDKWHGIKDKEVRYRQRYLDLIVNPEVRDVFRTRARVVRHIRRFLEERGFLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  + G  T  R F T     + +     L+ S E   KKLL  G EK+F     +RN 
Sbjct: 196 VILPTAGG-TEARPFKT---FHNALAHEFELRISLELPLKKLLVGGFEKVFELGRVFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ + +    ++    +        ++Q    +      
Sbjct: 252 GIDAQHNPEFTMLEAYWAYADYQDMAEMTEAMLSSLVQELTGGYTLAYQGRTIDFTPPFR 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++  E     A +D        D  D   L + A      +    ++  +  ++    +
Sbjct: 312 RLSFVEVLREKAGLDF-------DPLDLDRLRIWADAKHPELIEVPSY-KLLDKLFELYV 363

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    ++  T +  +PA  S LA  +      T+R++L+   +EL  A  EL DP++QR 
Sbjct: 364 EEE--LHDPTFVFDFPAVISPLAKKHREREGLTERWDLFVAGMELAPAYSELNDPLDQRE 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ + ++    E + +DEDFL  L   MP + G+ +G DRL M++    +I +VI  
Sbjct: 422 RFEEQARRREGGDEEAHRVDEDFLTALEHGMPPAGGMGLGIDRLTMILADQPSIRDVILF 481

Query: 346 PFSQSNQEE 354
           P  +    E
Sbjct: 482 PLLRPRAPE 490


>gi|3864|emb|CAA39699.1| lysine--tRNA ligase [Saccharomyces cerevisiae]
          Length = 591

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 151/374 (40%), Gaps = 30/374 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I   +R++  + +FIE+++ 
Sbjct: 213 LHMLPADHFGFKDQETRYRKRYLDLIMNKDARNRFITRSEIIRYIRKFLDQRKFIEVETP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 273 MMNVIAGGAT-AKPFITH---HNDLDMDMYMRIAPELFLKQLVVGGLDRVYEIGRQFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------N 158
                H PEFT  E+Y+A+     LM     +     +          +           
Sbjct: 329 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGSYIIKYHPDPADPAKELE 388

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     + I + E   +  N+   +            L        +      T + + 
Sbjct: 389 LNFSRPWKRINMIEELEKVFNVKFPSGDQLHTAETGEFLKKVLADNKLECPPPLTNARML 448

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 449 DKLVG---ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTEL 505

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE++ ++K +  +E   +DE F   L   +P + G   G DRL M +T +N
Sbjct: 506 NDPFDQRARFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSN 565

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  + +
Sbjct: 566 TIREVLLFPTLKPD 579


>gi|108709562|gb|ABF97357.1| Lysyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 528

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 81/363 (22%), Positives = 156/363 (42%), Gaps = 28/363 (7%)

Query: 9   WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R+ + S +R++     F+E+++  +    G   
Sbjct: 173 LRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMMNMIAGGAA 232

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LY++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 233 -ARPFVTH---HNELNMRLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 288

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A+  Y  L++    ++    +          +        +  +       I 
Sbjct: 289 TTCEFYMAYADYNDLIELTETMLSGMVKELTGGYKIKYHANGVEKPPIEIDFTPPFRKID 348

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E     A +++   L + +      L     +  ++     T + +  +++   +E  
Sbjct: 349 MIEELEAMAKLNIPKDLSSDEAN--KYLIDACAKYDVKCPPPQTTTRLLDKLVGHFLEET 406

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL DP+ QR RFE
Sbjct: 407 CV--NPTFIINHPEIMSPLAKWHRSRPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFE 464

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +++++++   +E   +DE F   L   +P + G  +G DRL ML+T + NI EV+  P  
Sbjct: 465 EQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAM 524

Query: 349 QSN 351
           +  
Sbjct: 525 KPQ 527


>gi|224143682|ref|XP_002325039.1| predicted protein [Populus trichocarpa]
 gi|222866473|gb|EEF03604.1| predicted protein [Populus trichocarpa]
          Length = 549

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 83/363 (22%), Positives = 153/363 (42%), Gaps = 28/363 (7%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R+ I   ++ +     F+E+++  +    G   
Sbjct: 195 LKDQETRYRQRYLDLMLNLEVQQIFKTRSKIIKYVKSFLDNLDFLEVETPMMNMIAGGAA 254

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LY++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 255 -ARPFVTH---HNDLNMKLYMRIAPELFLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 310

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A+  Y  LM+    ++    +          +        +  +       I 
Sbjct: 311 TTCEFYMAYADYNDLMELTEKMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPFRRID 370

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E   + AN+++   L + +      L    ++  ++     T + +  +++   +E  
Sbjct: 371 MIEELEKMANLNIPKDLSSDEAT--KYLVAACERFEVKCPPPQTTTRLLDKLVGHFLEET 428

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                   +   P   S LA  + + P  T+RFEL+    ELCNA  EL DP+ QR RFE
Sbjct: 429 CV--NPAFIINQPEIMSPLAKWHRSKPGLTERFELFVNKHELCNAYTELNDPVVQRERFE 486

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++++++   +E    DE F   L   +P + G  MG DRL ML+T + NI EV+  P  
Sbjct: 487 SQLKDRQSGDDEAMAFDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLFPAM 546

Query: 349 QSN 351
           +  
Sbjct: 547 KPQ 549


>gi|238685500|sp|A3M3D6|SYK_ACIBT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193076724|gb|ABO11430.2| lysyl-tRNA-synthase [Acinetobacter baumannii ATCC 17978]
          Length = 509

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 152 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    N++   A ++       +Q    +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLAIDILGTTDVPYQGEVFSFKGPFK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++    V        + + +  E 
Sbjct: 328 KISMFD-----AILENNPQFTPENVGDREFLAKFVREELKEEVKPGFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D +F+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 441 ERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVIL 500

Query: 345 TPFSQ 349
            P  +
Sbjct: 501 FPHMR 505


>gi|73669176|ref|YP_305191.1| lysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|72396338|gb|AAZ70611.1| lysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 515

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 162/364 (44%), Gaps = 29/364 (7%)

Query: 4   IPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +    +D    YR+R              + R+ + S +R Y  + +F+E ++  LQ
Sbjct: 164 LPEKFHGLKDVETRYRKRYLDLIVNADKREIFVMRSKLISEIRRYLSDREFLEFETPILQ 223

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G   + R F+T     + + + L+L+ +PE   K+L+  G EK+F  +  +RN +  
Sbjct: 224 NVYGGA-NARPFTT---FHNCLGQKLFLRIAPELYLKRLVVGGYEKVFEISKNFRNEDID 279

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYIT 169
             H PEFTM+E Y A+  Y  +M     +I                    N  +  + I+
Sbjct: 280 TTHNPEFTMIEVYEAYRDYNDMMDLTEGLISELVFKLTGSYEVKIGENTLNLHTPWKRIS 339

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEKIEP 228
           + +A   YA +D+              L   A +  I       T+ +  + +    +E 
Sbjct: 340 MEDALKEYAGLDVFAHS-------LEELKQIAIENRIEDYEKAKTYGEFLALLFEGLVED 392

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S LA  + +   F +RFEL+    EL N   EL DPIEQ+ RF
Sbjct: 393 K--LINPTFIYDFPVENSPLAKNHRSKEGFVERFELFLNGWELANGYSELNDPIEQQKRF 450

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E++ +++K    E   ID DF+  L   MP + G+ +G DRL M++ G ++I EVI  P 
Sbjct: 451 EEQDKKRKLGDLEAQTIDYDFVNALGYGMPPTGGMGLGIDRLTMILAGLDSIKEVILFPQ 510

Query: 348 SQSN 351
            +  
Sbjct: 511 MKRE 514


>gi|34556537|ref|NP_906352.1| lysyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|39932014|sp|Q7MAR1|SYK_WOLSU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|34482251|emb|CAE09252.1| LYSYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 507

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 88/367 (23%), Positives = 153/367 (41%), Gaps = 27/367 (7%)

Query: 3   QIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R                R+ + SS+R +F E  F+E+++  +
Sbjct: 144 PLPEKYHGLVDVELRYRQRYLDLIMNPEVKETFKLRSQVVSSVRRFFEERGFLEVETPMM 203

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + + F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 204 HPIPGGA-NAKPFITH---HNALGVDRYLRIAPELYLKRLVVGGFEAVFEINRNFRNEGM 259

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS-EPEYI 168
              H PEFTM+E+Y A+++Y +LM     +     E                FS     I
Sbjct: 260 DHSHNPEFTMIEFYWAYKTYHELMSLTEELFGYLFERLGLPKILPHGEEMIDFSLPFRRI 319

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +A      +            ++  L     + G+R+  +     + +      +E 
Sbjct: 320 PYKKALHEIGGV------PLEVIEEKEKLRAYLIEKGVRLEGEMGIGKLQAEAFDAFVEE 373

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S LA     +P+   RFEL+    E+ N   EL DP++Q  RF
Sbjct: 374 K--LINPTFITEFPIEISPLARRSDENPQIADRFELFIGKKEISNGFSELNDPLDQLERF 431

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + ++  K     E   +DED++  L   +P ++G  +G DRLVML+T   +I +VI  P 
Sbjct: 432 KAQVAAKNAGDEEAQHMDEDYVWALGHGLPPTAGEGIGIDRLVMLLTNNRSIKDVILFPA 491

Query: 348 SQSNQEE 354
            +  + +
Sbjct: 492 LKVQKSD 498


>gi|313899864|ref|ZP_07833367.1| lysine--tRNA ligase [Clostridium sp. HGF2]
 gi|312955479|gb|EFR37144.1| lysine--tRNA ligase [Clostridium sp. HGF2]
          Length = 502

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    +RRR   L            R  I  +++ Y      +E+++ 
Sbjct: 147 LRPLPEKYHGLQDVEERFRRRYVDLITNENSKRIALTRPRIIRAIQNYLDGEGLVEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  +  R F T     + +  P YL+ + E   K+L+  G E ++     +RN 
Sbjct: 207 VLQPILGGAS-ARPFVTH---HNTLDMPFYLRIATELPLKRLIVGGLEGVYEIGRLFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+     +M     ++   A  V       +Q+   +  +  +
Sbjct: 263 GMDATHNPEFTTVEAYVAYSDLSGMMDLVEGLLNHVAETVCGTTEIEWQDKTISLKAPFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +       +D    +   D          A++  I V         I +    + 
Sbjct: 323 RLHMVDGIKEACGVDFWQEMSFAD------ACAIAKEHDIEVEKKHNSVGHIINLFFEKY 376

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRF  R+EL+    E  NA  EL DPI+QR
Sbjct: 377 VEET--LIQPTYVYGHPVEISPLAKKNAQDPRFADRYELFIDGHEYANAFSELNDPIDQR 434

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +++ +    +E   +D D++  L   +P + G+ +G DRLVML+T +  I EV+ 
Sbjct: 435 ERFENQLKLRDLGDDEANEMDTDYVEALEYGLPPTGGVGLGIDRLVMLLTNSQTIREVLL 494

Query: 345 TPFSQ 349
            P  +
Sbjct: 495 FPHMR 499


>gi|294338844|emb|CAZ87178.1| Lysyl-tRNA synthetase, heat inducible (Lysine--tRNA ligase) (LysRS)
           [Thiomonas sp. 3As]
          Length = 509

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 153/364 (42%), Gaps = 22/364 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+   ++LR   +   F+E+++ 
Sbjct: 150 LRPLPDKFHGLEDVETRYRQRYVDLIVTPESRERFALRSKAIAALRNEMLAAGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + + + +YL+ +PE   K+LL  G E++F     +RN 
Sbjct: 210 MLHPIPGGAA-AKPFITH---HNALDQQMYLRIAPELYLKRLLVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A  +Y   M     +IR  A+      + + Q    +  +   
Sbjct: 266 GLSPRHNPEFTMMEFYAAWWTYRDQMDFTEALIRNTAQLTCGTAVLTHQGRTLDLSAPFA 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  ++A  D        D   R  L                   +   +  +  
Sbjct: 326 RLTLTQAIQKHAP-DYTDAQLADDGFLRGELRRLDADHAPHKLKGMGLGALQLALFEQVA 384

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    AD   T+RFEL+    E+ N   EL DP +Q  
Sbjct: 385 E--HMLWEPTFIVDYPVEVSPLARAADADANTTERFELFITGREIANGFSELNDPEDQAA 442

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K+   +E    D D++  L   MP + G  +G DRLVML+T A +I +VI  
Sbjct: 443 RFQSQVQAKEAGDDEAMYFDADYVRALEYGMPPAGGCGIGIDRLVMLLTDAPSIRDVILF 502

Query: 346 PFSQ 349
           P  +
Sbjct: 503 PALR 506


>gi|325116654|emb|CBZ52207.1| putative lysyl-tRNA synthetase [Neospora caninum Liverpool]
          Length = 598

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 86/372 (23%), Positives = 149/372 (40%), Gaps = 28/372 (7%)

Query: 1   MHQIPSQP-WWNRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P +    + +  +R            R   L R+ I + LR +     F+E+++  
Sbjct: 210 LHMLPERNTLKDFEVRFRHRYLDLIVNDETRKTFLIRSRIVNFLRHFLEARGFVEVETPM 269

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     R F T     + +   LY++ +PE   K L+  G +++F     +RN  
Sbjct: 270 MNVIAGGAA-ARPFKTH---HNDLDMDLYMRIAPELFLKMLIVGGLDRVFEIGKNFRNEG 325

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------CN 160
               H PEFT  E+Y A+  Y  LM     ++       +       + +         +
Sbjct: 326 IDMTHNPEFTACEFYWAYADYNDLMDLTEELLSSMVMALHGTYQIQYHPDGPGGEAVTLD 385

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  +++ E   + A + L   LD  +      +     +  + +    T + +   
Sbjct: 386 FTPPFARLSMVEEIEKKAGVTLPRPLDGDECI--AFMKDLLIKNKVELPQPTTSAKLLDA 443

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +  E +E          +  +P   S LA  + + P  T+RFEL+    ELCNA  EL D
Sbjct: 444 LCGEYVECQAQTKPV-FITEHPQIMSPLAKWHRSKPELTERFELFVMGKELCNAYTELND 502

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P++QR  F  + + K    +E   IDE F   L   +P + G  +G DRL M ++  N I
Sbjct: 503 PVKQRECFMDQAKAKAAGDDEAACIDEVFCTALEYGLPPTGGWGLGIDRLTMFLSDHNTI 562

Query: 340 NEVIWTPFSQSN 351
            EVI  P  +  
Sbjct: 563 KEVILFPAMRPQ 574


>gi|313889087|ref|ZP_07822743.1| lysine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312844827|gb|EFR32232.1| lysine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 635

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 176/370 (47%), Gaps = 27/370 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KRN I   +RE+  +  F+E+++ 
Sbjct: 137 LQILPEKFHGLKDPDLRYRQRYVDLIVNPEVKDVFIKRNKIIKKIREFLDKKDFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +   + L+ + E   K+L+  G +K++     +RN 
Sbjct: 197 ILGTVAGGA-NARPFYTH---HNTLDIDMQLRIANELFLKRLIVGGFDKVYEMGKMFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  YE++M+   ++    A EV      ++Q       +  +
Sbjct: 253 GMDTRHNPEFTNIELYQAYVDYEEMMRITEDLFEYVALEVLGTDTINYQGTEICLKAPWK 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ +A  +YA++D      +            A++ GI V  +DTW  + S +  E  
Sbjct: 313 RITMIDAVKKYADVDFNEIDTD------EKAREIAREKGIEVHENDTWGKLLSEMFEEFC 366

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S LA   P DPR T+RFE +    E  NA  EL DPI+QR 
Sbjct: 367 EEH--LVEPTFVIGHPVDVSPLAKRNPKDPRLTQRFEAFINTWEFANAFSELNDPIDQRQ 424

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE ++ EK    +E +P+D DF+  +   +P + G+ +G DR+++L+T   +I +V+  
Sbjct: 425 RFEAQVAEKAAGDDEAHPMDSDFINAIEVGLPPTGGLGIGVDRMIVLLTDQPSIRDVLLF 484

Query: 346 PFSQSNQEEI 355
           P  +    E+
Sbjct: 485 PTMKPLGAEV 494


>gi|322411385|gb|EFY02293.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 497

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 151/366 (41%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFNRFVTRSKMISEIRRYLDGLDFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFVTH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II+ AA+         +Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    I +    E 
Sbjct: 320 RVHMVDAIKEVTGVDFWPEMTVEE------AIALAKEKQVPLEKHFTSVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVFGHPVEVSPLAKKNPKDARFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + Q K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 491

Query: 345 TPFSQS 350
            P  + 
Sbjct: 492 FPTMKP 497


>gi|225620049|ref|YP_002721306.1| lysyl-tRNA synthetase LysU (class II) [Brachyspira hyodysenteriae
           WA1]
 gi|225214868|gb|ACN83602.1| lysyl-tRNA synthetase LysU (class II) [Brachyspira hyodysenteriae
           WA1]
          Length = 510

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 86/367 (23%), Positives = 171/367 (46%), Gaps = 30/367 (8%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +     D    YR+R              +KR+ + S++RE  +EN F+E+++ 
Sbjct: 153 LNPLPEKFHGLTDTELRYRQRYVDLIMNDDVKEAFIKRSKMISAIREVMIENNFLEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   LYL+ +PE   K+L+  G +++F     +RN 
Sbjct: 213 MMHPLIGGA-KAKPFITH---HNTLDMTLYLRIAPELYLKRLVVGGFDRVFELNRNFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPE 166
                H PEFTM+E Y A+ ++ ++M+    +        N K  S +++   N      
Sbjct: 269 GISTRHNPEFTMMEAYMAYANFHKVMELVEEVFSKVCFKLNGKYTSQYKDYEINFKPPFA 328

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILI 223
            + + +    ++ +D      + +  ++      A+  G+ +       +  ++   +  
Sbjct: 329 RVPMVDLVKEHSGLDFNAIQSDDEALEK------AKSVGVEIDTSKTKPSKWEVMVAVFE 382

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           EK+E    +   T +  YP   S L+  YP +P  T+R+EL+   +E+ N   EL DPI+
Sbjct: 383 EKVEEK--LIQPTFVINYPKAVSPLSKSYPDNPDITERYELFIGGMEMSNGFSELNDPID 440

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ RFE++++ K +  +ET  +D D++  L   +P + G+ +G DR+ +L     +I + 
Sbjct: 441 QKERFEEQLKAKARGEDETMDMDLDYINALEYGLPPTGGLGIGIDRMAILFLNVASIRDT 500

Query: 343 IWTPFSQ 349
           I  P  +
Sbjct: 501 ILFPQMR 507


>gi|296134907|ref|YP_003642149.1| lysyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795029|gb|ADG29819.1| lysyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 506

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 153/364 (42%), Gaps = 22/364 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+   ++LR   +   F+E+++ 
Sbjct: 147 LRPLPDKFHGLEDVETRYRQRYVDLIVTPESRERFALRSKAIAALRNEMLAAGFMEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T     + + + +YL+ +PE   K+LL  G E++F     +RN 
Sbjct: 207 MLHPIPGGAA-AKPFITH---HNALDQQMYLRIAPELYLKRLLVGGFERVFEINRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A  +Y   M     +IR  A+      + + Q    +  +   
Sbjct: 263 GLSPRHNPEFTMMEFYAAWWTYRDQMDFTEALIRNTAQLTCGTAVLTHQGRTLDLSAPFA 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  ++A  D        D   R  L                   +   +  +  
Sbjct: 323 RLTLTQAIQKHAP-DYTDAQLADDGFLRGELRRLDADHAPHKLKGMGLGALQLALFEQVA 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA    AD   T+RFEL+    E+ N   EL DP +Q  
Sbjct: 382 E--HLLWEPTFIVDYPVEVSPLARASDADANTTERFELFITGREIANGFSELNDPEDQAA 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ ++Q K+   +E    D D++  L   MP + G  +G DRLVML+T A +I +VI  
Sbjct: 440 RFQSQVQAKEAGDDEAMYFDADYVQALEYGMPPAGGCGIGIDRLVMLLTDAPSIRDVILF 499

Query: 346 PFSQ 349
           P  +
Sbjct: 500 PALR 503


>gi|309792629|ref|ZP_07687090.1| lysyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308225351|gb|EFO79118.1| lysyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 489

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 157/364 (43%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++  P +     D   R             RR     R    S++R       F+E+++ 
Sbjct: 135 INPPPEKWAGLSDVEERHRQRYLDLIVNSERRDIFRARARTISTMRSVLDARGFVEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F+T     + + + LYL+ + E   K+L+  G   ++  +  +RN 
Sbjct: 195 VLQPIYGGAA-ARPFTT---YHNQLGQNLYLRIATELYLKRLIVGGFPGVYEISKNFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A   Y  +M     ++R  A       +  +Q    +      
Sbjct: 251 GVDRSHNPEFTMMECYQAFADYRDVMDLVEVMLREIALAVTGGTLVPYQGQQLDFGRPWP 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++A+A      ID+          +  +L+     A ++V    TW+     I  E +
Sbjct: 311 RISMAQAILEQTGIDIAQIH------EIDVLHAAMNAANLKVERKGTWAKQVDEIFSEYV 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P   +   T +  YP   S LA   P  P FT+RFE +   +E+ NA  EL DP +Q  
Sbjct: 365 QP--LLIQPTFIIDYPVELSPLAKRKPEQPAFTERFEAFIVGMEIGNAFSELNDPFDQEQ 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++++     +E + +D D++  L   MP + G+ +G DRLVM++T    I EVI  
Sbjct: 423 RFLDQLKDFAAGDDEAHQMDADYVNALMYGMPPTGGLGIGIDRLVMVLTDQPTIREVILF 482

Query: 346 PFSQ 349
           P  +
Sbjct: 483 PHMR 486


>gi|315613067|ref|ZP_07887978.1| lysine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315177|gb|EFU63218.1| lysine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 496

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 152/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKAVKGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        D        + A++      H      I +    E +
Sbjct: 320 RVHMVDAIKGITGVDFWQ-----DMTFEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVYGHPVAVSPLAKKNPEDDRFTDRFELFIMTKEYGNAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|224106978|ref|XP_002333583.1| predicted protein [Populus trichocarpa]
 gi|222837523|gb|EEE75888.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 83/363 (22%), Positives = 154/363 (42%), Gaps = 28/363 (7%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R+ I   ++ +     F+E+++  +    G   
Sbjct: 238 LKDQETRYRQRYLDLMLNLEVQQIFKTRSKIIKYVKSFLDNLDFLEVETPMMNMIAGGAA 297

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LY++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 298 -ARPFVTH---HNDLNMKLYMRIAPELFLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 353

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A+  Y  LM+    ++    +          +        +  +       I 
Sbjct: 354 TTCEFYMAYADYNDLMELTEKMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPFRRID 413

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E   + AN+++   L + +      L    ++  ++     T + +  +++   +E  
Sbjct: 414 MIEELEKMANLNIPKDLSSDEAT--KYLVAACERFEVKCPPPQTTTRLLDKLVGHFLEET 471

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                   +   P   S LA  + + P  T+RFEL+    ELC+A  EL DP+ QR RFE
Sbjct: 472 CV--NPAFIINQPEIMSPLAKWHRSKPGLTERFELFVNKHELCDAYTELNDPVVQRERFE 529

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++++++   +E    DE F   L   +P + G  MG DRLVML+T + NI EV+  P  
Sbjct: 530 SQLKDRQSGDDEAMAFDETFCTALEYGLPPTGGWGMGIDRLVMLLTDSQNIKEVLLFPAM 589

Query: 349 QSN 351
           +  
Sbjct: 590 KPQ 592


>gi|13508016|ref|NP_109965.1| lysyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501019|sp|P75500|SYK_MYCPN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1674257|gb|AAB96206.1| lysyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 489

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 98/364 (26%), Positives = 170/364 (46%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +   P +     + +   R+R              LKR  I +++R +  E  F+E+++ 
Sbjct: 135 LQTPPEKWHGLTDPEARARKRYLDLTYNRAQVEVFLKRTQIITAIRTFLNEAGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + + F T     + ++   YL+ + E + KKL+  G  K++     +RN 
Sbjct: 195 ILQAVLGGA-NAKPFKTHY---NALKGDFYLRIANEIALKKLIVGGLPKVYEMGRMFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A+  Y  +M    N+I+   +  NQ  F++     +     + 
Sbjct: 251 GVDTTHNPEFTSIEMYQANADYAVMMDLTENLIKFVCKTLNQWSFNWNGQTLDLAKPFKK 310

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKI 226
           + + +   +   ++        D  D       A+Q  + +  H+     I +R   +  
Sbjct: 311 VKMVDLICQVTGVNFD------DVKDDQTAIALAKQHKVELKKHEQNKQHIINRFFEQFC 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA   P +P FT+RFEL+    EL NA  EL DP+EQR 
Sbjct: 365 EHT--LIQPTFVTHYPKAVSPLAKQDPHNPEFTERFELFINTKELANAYSELNDPLEQRA 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE+++QEK+   +E   +DE FL  L+  +P + G+ +G DRLVML+   ++I +V++ 
Sbjct: 423 RFEQQLQEKRMGNDEASELDESFLDALSFGLPPTGGLGIGVDRLVMLLCECSSIRDVVFF 482

Query: 346 PFSQ 349
           P  +
Sbjct: 483 PQLR 486


>gi|239502972|ref|ZP_04662282.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 509

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 152 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    N++ + A ++       +Q    +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGTTDVPYQGEVFSFKGPFK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++    V        + + +  E 
Sbjct: 328 KISMFD-----AILENNPQFTPENVGDREFLAKFVREELKEEVKPGFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D +F+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 441 ARFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVIL 500

Query: 345 TPFSQ 349
            P  +
Sbjct: 501 FPHMR 505


>gi|315444464|ref|YP_004077343.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1]
 gi|315262767|gb|ADT99508.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1]
          Length = 1101

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 148/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     D   R              R  +  R+ I  ++RE  V   F+E+++ 
Sbjct: 744  LRPLPDKWKGLTDQEARVRARYVDLAVNTDARELIKARSAILHAIRETLVGKGFLEVETP 803

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L   G E++F    A+RN 
Sbjct: 804  ILQQIHGGA-NARPFLTHI---NAYDLDLYLRIAPELYLKRLCVGGVERVFELGRAFRNE 859

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA  AN     F+          + 
Sbjct: 860  GVDFSHNPEFTLLEAYQAHADYTVWIDGCRELIQNAAMAANGSHVFFRPREDGVLEPVDI 919

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +            D   L     +AGI          +   +    +E
Sbjct: 920  SGRWAVKTVHGAVSEALGEHIDVDTDLATLRRLCDKAGIPYLTHWDAGAVVLEMYEHLVE 979

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R
Sbjct: 980  DQ--TTEPTFYKDFPTSVSPLTRPHRSIPGVAERWDLVAWGVELGTAYSELTDPVEQRRR 1037

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1038 LQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFP 1096

Query: 347  FSQSN 351
             ++  
Sbjct: 1097 LAKPR 1101


>gi|302336409|ref|YP_003801616.1| lysyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301320249|gb|ADK68736.1| lysyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 697

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 87/369 (23%), Positives = 140/369 (37%), Gaps = 31/369 (8%)

Query: 2   HQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     +R+  YR+R                R+ I S +R Y   + +IE+++  
Sbjct: 146 RPLPEKFHGLTDRELRYRQRYVDLIMNRDVRDTFRMRSAIVSQIRRYMESDGYIEVETPM 205

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G   + R F T     + + +  YL+ + E   K+L+  G E++F     +RN  
Sbjct: 206 MHAILGGA-NARPFVTHF---NALDRNFYLRIATELPLKRLIVGGMERVFEIGRQFRNEG 261

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-----EVANQKIFSFQNVNCNPFS 163
               H PEFT +E Y A+   + +    M + +  A          +   +Q    +   
Sbjct: 262 MDLTHNPEFTSMEAYCAYSDLQGMKDLTMGLFKAIAREACGCEEGHEAIVYQGQEIDLSG 321

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
                TVAE  +     +L              L        I    +     +   +  
Sbjct: 322 TWRSATVAEIASEVCGEELTIDTP------LDHLRELCAAHSIEWRENWGAGKLLFELYD 375

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E    +   T +  YP   S LA     DP  T RFEL     E  NA  EL DP++
Sbjct: 376 ELGEET--LVNPTFVCDYPEEVSPLAKRKDDDPCITDRFELVIAGHEYANAFSELNDPVD 433

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q  RF +++  K    +E    D D++  L   MP + GI  G DR+VML      I +V
Sbjct: 434 QAGRFAEQVAAKGFGDDEAMGYDYDYVRALEYGMPPAGGIGFGIDRMVMLFCDQPAIRDV 493

Query: 343 IWTPFSQSN 351
           +  P  +  
Sbjct: 494 LLFPQMKPE 502


>gi|145224128|ref|YP_001134806.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|296439666|sp|A4T9U2|LYSX_MYCGI RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|145216614|gb|ABP46018.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 1101

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 148/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     D   R              R  +  R+ I  ++RE  V   F+E+++ 
Sbjct: 744  LRPLPDKWKGLTDQEARVRARYVDLAVNTDARELIKARSAILHAIRETLVGKGFLEVETP 803

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L   G E++F    A+RN 
Sbjct: 804  ILQQIHGGA-NARPFLTHI---NAYDLDLYLRIAPELYLKRLCVGGVERVFELGRAFRNE 859

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA  AN     F+          + 
Sbjct: 860  GVDFSHNPEFTLLEAYQAHADYTVWIDGCRELIQNAAMAANGSHVFFRPREDGVLEPVDI 919

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +            D   L     +AGI          +   +    +E
Sbjct: 920  SGRWAVKTVHGAVSEALGEHIDVDTDLATLRRLCDKAGIPYLTHWDAGAVVLEMYEHLVE 979

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R
Sbjct: 980  DQ--TTEPTFYKDFPTSVSPLTRPHRSIPGVAERWDLVAWGVELGTAYSELTDPVEQRRR 1037

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1038 LQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFP 1096

Query: 347  FSQSN 351
             ++  
Sbjct: 1097 LAKPR 1101


>gi|255037757|ref|YP_003088378.1| lysyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254950513|gb|ACT95213.1| lysyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 571

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 99/377 (26%), Positives = 170/377 (45%), Gaps = 36/377 (9%)

Query: 1   MHQIPS----------QPWWNRDFHYRR-----------RPFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+           R   +KR  I +++R +F  N
Sbjct: 140 LRPLPVVKRDEDGNVHDGFTDPELRYRQRYVDLIVNPEVREIFIKRARIITTMRSHFDSN 199

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+++  LQ   G     R F+T     + +   LYL+ + E   K+L+  G E ++ 
Sbjct: 200 GWLEVETPVLQSIHGGAA-ARPFTTH---HNALDLGLYLRIATELHLKRLIVGGFEGVYE 255

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVN 158
           F   +RN      H PEFT +E Y A++ Y  +MK    ++   A   N     +F  V 
Sbjct: 256 FGKLFRNEGMDRTHNPEFTTVELYVAYKDYLWMMKMTEEVLEKVALAVNGTTKATFNGVE 315

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +       +++ +A  ++  +D        +  D   +  Q +  G+ V        + 
Sbjct: 316 LDFAGPYPRLSITDAIKQFTGLD-------VEALDEVAIREQCRAWGMEVNESMGKGKLI 368

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK+E N  I   T +  +P   S L   +       +RFEL+    E+ NA  EL
Sbjct: 369 DEIFGEKVESN--IIQPTFIIDHPVEMSPLTKKHRTKKGMVERFELFVNGREIANAYSEL 426

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPIEQ+ RFE +++ K+K  +E   +D+DF+  L   MP ++GI +G DRL ML+T   
Sbjct: 427 NDPIEQKERFEDQLRLKEKGDDEAMEMDDDFIRSLEYGMPPTAGIGIGIDRLTMLLTDNV 486

Query: 338 NINEVIWTPFSQSNQEE 354
           +I EVI+ P  +  ++ 
Sbjct: 487 SIQEVIFFPQMRPEKKA 503


>gi|292492473|ref|YP_003527912.1| lysyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291581068|gb|ADE15525.1| lysyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 500

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 159/368 (43%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               +R+ I   +R Y  +  F+E+++ 
Sbjct: 140 LRPLPEKFHGLADQETRYRQRYLDLIMNEVTRETFRRRSYIIDRIRRYLGDKGFLEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG     R F T     + +   L+L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 200 MMQAIPGGAV-ARPFIT---YHNTLDMELFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+ +YE LM     ++R  A+        ++Q    +  S   
Sbjct: 256 GLSARHNPEFTMLEFYQAYATYEDLMDLTEAMMRDLAQTVLGSTEITYQGETYDFGSPFT 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ E+      +     +   D          A+   I +        I   I  + +
Sbjct: 316 RMSLKESI-----LSFNPDIFPADLETLPAARRVAEHLDIPLRESYGLGKIQLEIFEKTV 370

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP    RFE +    E+ N   EL D  +Q  
Sbjct: 371 ESR--LKNPTFITAYPTEVSPLARRNETDPLVADRFEFFVGGWEIANGFSELNDAEDQAE 428

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++Q+++    E    D D++  L   MP ++G  +G DRLVML+T + +I +V+  
Sbjct: 429 RFRAQLQDREAGDQEAMHFDMDYIQALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLF 488

Query: 346 PFSQSNQE 353
           P  +  ++
Sbjct: 489 PHMRPREK 496


>gi|85086144|ref|XP_957635.1| lysyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28918729|gb|EAA28399.1| lysyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|29150133|emb|CAD79693.1| probable lysine-tRNA ligase [Neurospora crassa]
          Length = 618

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 153/372 (41%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQ--PWWNRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +PS   P+ + +   R            R  L +R+ +   +R++F E +FIE+++ 
Sbjct: 228 LHMLPSVRYPFADAEQRARMRYLDMLWNDRSRETLWQRSRMVRYIRDFFHERRFIEVETP 287

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T +  F T     + +   ++++ +PE   KK++     K+F     +RN 
Sbjct: 288 MMHAIAGGATAL-PFVTH---HNDLDMDMFMRVAPELFLKKMIVGQFGKVFEMGKNFRNE 343

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF------QNVNCNP 161
                H PEFT +E+Y A+     LM     ++    +       +       +    N 
Sbjct: 344 GIDLTHNPEFTSIEFYWAYADVYDLMSITEELVSSLVKELTGSYKTKFTNQHGETYEVNW 403

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    + +  A                       L    ++  +      T + +  ++
Sbjct: 404 EAPWRRVEMIPALEEATGEKFPPYDQLHTDETNAFLQRICKKMNVECPPPLTNARMIDKL 463

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E IE        T +  +P   S LA  + +     +RFE + C  E+ NA  EL +P
Sbjct: 464 TGEFIEETC--INPTFILEHPQMMSPLAKYHRSKNGLCERFEAFVCKKEIANAYTELNNP 521

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   +DE FL  L   +P + G  +G DRL M +T   +I 
Sbjct: 522 FDQRLRFEEQARQKDQGDDEAQLVDESFLNALEYGLPPTGGWGLGIDRLAMFLTDNYSIR 581

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF +  +
Sbjct: 582 EVLAFPFLREEK 593


>gi|162448223|ref|YP_001621355.1| lysyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161986330|gb|ABX81979.1| lysyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 495

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 94/363 (25%), Positives = 150/363 (41%), Gaps = 26/363 (7%)

Query: 1   MHQIPSQPWWNRDFHY--RRRPFL-----------LKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D     RRR                R  I  + + YF  N FIE+++ 
Sbjct: 141 ITPLPDKFHGLQDKEEARRRRYVDLIVNEDSMRVARTRPRIIRAFQHYFDSNGFIEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +    YL+ + E   K+L+  G E+++     +RN 
Sbjct: 201 VLHPILGGAA-ARPFVTH---HNTLDMDFYLRIATELPLKRLIVGGMERVYEIGRLFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A      +MK   + +   A   N       N       + + 
Sbjct: 257 GISAKHNPEFTTVEAYQAFGDVTDMMKLVEDCLSSVAFEVNGSYDVVFNDQTIHLKDFKR 316

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
             + +        D                   A++  ++V    T   I      + +E
Sbjct: 317 AHMVDLIKEQTGEDFFNQYS------LEEAKQIAKKHNVQVEPHFTVGHIIEAFFNDYVE 370

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               I   TI+  +P   S LA     DPRFT RFEL+    E  NA  EL DP++Q++R
Sbjct: 371 KT--IIQPTIVFGHPVEISPLAKSNDKDPRFTDRFELFIMGSEYANAFSELNDPVDQKNR 428

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++++K+K  +E   +D DF+  L   MP + GI +G DR +ML+T   NI +VI  P
Sbjct: 429 FLDQLKQKEKGDDEASEMDIDFVEALEYGMPPTGGIGIGIDRFIMLLTNTPNIRDVILFP 488

Query: 347 FSQ 349
            ++
Sbjct: 489 HAR 491


>gi|260550687|ref|ZP_05824895.1| lysyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260406193|gb|EEW99677.1| lysyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 520

 Score =  313 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 163 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETP 222

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 223 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 278

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    N++ + A ++       +Q    +     +
Sbjct: 279 GVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGTTDVPYQGEVFSFKGPFK 338

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++    V        + + +  E 
Sbjct: 339 KISMFD-----AILENNPQFTPENVGDREFLAKFVREELKEEVKPGFGLGKLQTIVFEET 393

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 394 VETK--LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQA 451

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D +F+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 452 ERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVIL 511

Query: 345 TPFSQ 349
            P  +
Sbjct: 512 FPHMR 516


>gi|213156802|ref|YP_002318463.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|332853679|ref|ZP_08434909.1| lysine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332870858|ref|ZP_08439503.1| lysine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|213055962|gb|ACJ40864.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|332728503|gb|EGJ59877.1| lysine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332731959|gb|EGJ63237.1| lysine--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 520

 Score =  313 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 163 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETP 222

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 223 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 278

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    N++ + A ++       +Q    +     +
Sbjct: 279 GVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGTTDVPYQGEVFSFKGPFK 338

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++    V        + + +  E 
Sbjct: 339 KISMFD-----AILENNPQFTPENVGDREFLAKFVREELKEEVKPGFGLGKLQTIVFEET 393

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 394 VETK--LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQA 451

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D +F+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 452 ERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVIL 511

Query: 345 TPFSQ 349
            P  +
Sbjct: 512 FPHMR 516


>gi|319957389|ref|YP_004168652.1| lysyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419793|gb|ADV46903.1| lysyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 520

 Score =  313 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 85/368 (23%), Positives = 158/368 (42%), Gaps = 28/368 (7%)

Query: 2   HQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P +     +++  YR+R                R+ I S +R +F E  F+E+++  
Sbjct: 144 HPLPEKFHGLTDQEIRYRQRYLDMIMNPEVKKTFKLRSRIVSLVRRFFEEKGFLEVETPM 203

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +   PG   + R F T     + +    YL+ +PE   K+L+  G E +F     +RN  
Sbjct: 204 MHPIPGGA-NARPFVTR---HNALGVDRYLRIAPELYLKRLIVGGMEAVFEINRNFRNEG 259

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPEY 167
               H PEFTM+E+Y A  +YE LM+    +     E         + +   +  +    
Sbjct: 260 MDHTHNPEFTMIEYYWAWHTYEDLMRLTEELFDYLFENLGLPRKLPYGDQEVDFTTPFRK 319

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +   E+      +            DR       ++ G+    + +   + + +    +E
Sbjct: 320 VGYLESLHTIGGVPEAVI------TDREKARAYLKEHGVETDPNLSLGYLQAELFDAFVE 373

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     +P   +RFEL+    E+ N  +EL DP++Q  R
Sbjct: 374 EK--LINPTFVVDFPVEISPLARRSDENPEIAERFELFIAGKEIANGFNELNDPLDQYER 431

Query: 288 FEKEMQEKK-KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           F+ +++ K+    +E   +D D++  L   M  ++G  +G DRLVML+T  ++I +V+  
Sbjct: 432 FKMQVEAKEVTGDDEAMHMDLDYVRALSYGMAPTAGEGIGIDRLVMLLTNQHSIRDVLLF 491

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 492 PAMRPEAK 499


>gi|156842328|ref|XP_001644532.1| hypothetical protein Kpol_1052p21 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115177|gb|EDO16674.1| hypothetical protein Kpol_1052p21 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 591

 Score =  313 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 85/376 (22%), Positives = 152/376 (40%), Gaps = 30/376 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I S +R++  E  FIE+++ 
Sbjct: 214 LHMLPADHFGFKDQETRYRKRYLDLIMNKDARGRFITRSKIISYIRKFLDERSFIEVETP 273

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 274 MMNVIAGGAT-AKPFVTH---HNDLDMDMYMRIAPELFLKELVVGGMDRVYEIGRQFRNE 329

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y+A+     LM     +     +          +         + 
Sbjct: 330 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELLFSEMVKEITGSYVIKYHPDPSNPEKEME 389

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     + I + E   +  N+                L        +      T + + 
Sbjct: 390 LNFTRPWKRINMIEELEKTFNVTFPAGDQLHTAETGVFLKQILIDNKLDCPPPLTNARML 449

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 450 DKLVG---ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTEL 506

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE++ ++K +  +E   IDE F   L   +P + G   G DRL M +T +N
Sbjct: 507 NDPFDQRERFEEQARQKDQGDDEVQLIDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSN 566

Query: 338 NINEVIWTPFSQSNQE 353
            I EV+  P  + + +
Sbjct: 567 TIREVLLFPTLKPDTQ 582


>gi|223998046|ref|XP_002288696.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220975804|gb|EED94132.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 502

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 94/363 (25%), Positives = 146/363 (40%), Gaps = 21/363 (5%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR R               KR  I SSLR       F+EI++  L
Sbjct: 146 PLPDKYHGLTDISKRYRNRHLDLIVNPSVRDTFYKRAKITSSLRRQLDAKGFLEIETPVL 205

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG     + F T     + +   L L+ + E   K+L+  G  +++     +RN   
Sbjct: 206 HTQPGGA-EAKPFET---YHNTMDMDLTLRIATELHLKRLIIGGFPRVYELGRIFRNEGI 261

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFT +E Y+A+  Y  +M     ++   A   +  +             P    
Sbjct: 262 STRHNPEFTSVELYQAYADYHDMMDLTEELVCGMANEVSDSLIMPYGEYTISLERPWRRV 321

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
                 +    D    L +P   D       A      V    T   + +    E  EP 
Sbjct: 322 TMHDIVKEEIPDFDFDLSDPSTLDAAKAAATAAGV-PDVGKCSTVGYVLNACFEELCEPK 380

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  YP   S L+  +   P   +RFEL+A   E+ N+  EL DP++QR RFE
Sbjct: 381 --LIQPTFVIDYPVEVSPLSKPHRNKPGMVERFELFATGREMANSFSELTDPVDQRERFE 438

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +  +K     E   +DE+FL+ L   MP + G+ +G DRLVML+T + +I +VI  P  
Sbjct: 439 AQAAKKAAGDEEACDVDEEFLSALEQGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLL 498

Query: 349 QSN 351
           + +
Sbjct: 499 KPD 501


>gi|193217041|ref|YP_002000283.1| lysyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|226737094|sp|B3PNH7|SYK_MYCA5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|193002364|gb|ACF07579.1| lysyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 490

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 156/364 (42%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +R+  YR R              + R+ I   +REYF    F+E+D+ 
Sbjct: 136 LIPLPDKFHGLVDREDRYRHRYVDTIVNEDVKKTFILRSKIIKLIREYFDNLNFLEVDTP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     + F T     + +    YL+ + E   KKL+  G E+++     +RN 
Sbjct: 196 VLQPILGGAA-AKPFITYY---NALNCNFYLRIATELPLKKLIVGGFERVYEIGRIFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+     +M+    + R  AE  N +  +F     +       
Sbjct: 252 GIDTTHNPEFTSIEFYEAYSDMWGMMERTEGVFRYIAEKLNVQKLNFAGKEIDITKPFAK 311

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I + +A +    +       N  + D       A+Q  I+V        +   +  + IE
Sbjct: 312 INMVDAVSEKIGV-------NVRELDDKKALELAKQHDIKVEKYFKLGHVIEALFEKYIE 364

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA    +DPRFT+R EL+ C  E  N   EL DP +Q  R
Sbjct: 365 ET--LIQPTFVYGHPLDISPLAFKDESDPRFTQRAELFICTKEFANMYTELNDPFDQLQR 422

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE ++ EK     E   ID DF+  L   MP + G  +G +RL+M  T  ++I EV+  P
Sbjct: 423 FEAQLDEKNAGNEEANEIDWDFVKALEYGMPPTGGCGIGIERLIMFFTENDSIREVLLFP 482

Query: 347 FSQS 350
             ++
Sbjct: 483 QLKA 486


>gi|256848392|ref|ZP_05553835.1| lysyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714990|gb|EEU29968.1| lysyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 499

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                   I  ++R Y   N F E+++ 
Sbjct: 143 LRPLPDKYHGLQDPELVYRQRYLDLITNRDSFERFQTWTKIIKAIRNYMDSNDFTEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L+         R F T     + +   +Y++ + E   K+L+  G E+++     +RN 
Sbjct: 203 ILENVASGA-EARPFITH---HNALDIDMYMRIATELRLKRLIVGGMERVYELGRIFRNE 258

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEF  +E Y A+  +  +M++   I + AA+V +     ++Q    +     E
Sbjct: 259 GMDPHHNPEFDTMETYAAYFDFNDVMQETEGIFKTAAKVVSDDLKVNYQGTELDFSKPFE 318

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A  ++  +D    +              A + G++         I +    +K+
Sbjct: 319 RMHMVDAIKKFTGVDFWPEMTV------EEARKLADENGVQYEDWWKVGHIINAFFEDKV 372

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +    +     +  +P   S LA++   DPRFT RFELY    E  NA  EL DPI+QR 
Sbjct: 373 QDQ--LEQPIFIYGHPKEISPLAHLNREDPRFTDRFELYILGNEYANAFTELNDPIDQRQ 430

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE E +E  +  +E  PIDEDF+  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 431 RFEAEAKEHAEGNDEYQPIDEDFVEALEYGMPPTGGLGVGIDRLVMLMTDAKSIRDVLLF 490

Query: 346 PFSQSN 351
           P  +  
Sbjct: 491 PTMRPK 496


>gi|168038837|ref|XP_001771906.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676857|gb|EDQ63335.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 609

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 83/370 (22%), Positives = 165/370 (44%), Gaps = 29/370 (7%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R+ +   +R +  +  F+E+++  +    G   
Sbjct: 234 LKDQETRYRQRYLDLMLNSDIRNVFKTRSQVIRYVRRFLDDRDFVEVETPMMNMIAGGAA 293

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             + F T     + +   L+++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 294 -AKPFKTH---HNDLNMDLFMRIAPELYLKELIVGGLDRVYEIGKQFRNEGIDLTHNPEF 349

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A+  Y+ LM+    ++    +          +        +  +       I 
Sbjct: 350 TTCEFYWAYADYDDLMRVTEEMLSGMVKEITGGYKIQYHSNGLDQPAIEIDFTPPFRRID 409

Query: 170 VAEAFARYAN--IDLGTTLDNPDQPDRHL-LYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
           + +    Y+   I L  +L+  + P+ +  L    ++  ++     T + +  +++   I
Sbjct: 410 MIKGLEEYSEGKIKLPESLELLESPEVNKYLIEACEKFDVKCPPPQTTTRLLDKLVGHFI 469

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL DP+ QR 
Sbjct: 470 EEQCV--NPTFIMHHPQIMSPLAKWHRSIPGLTERFELFVNKHEVCNAYTELNDPVVQRE 527

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++++++K  +E   IDE+F   L   +P ++G  MG DR  M++T + NI EV+  
Sbjct: 528 RFADQVKDREKGDDEAMAIDENFCIALEYGLPPTAGWGMGIDRFTMMLTDSQNIKEVLLF 587

Query: 346 PFSQSNQEEI 355
           P  + +++ I
Sbjct: 588 PAMKPHEDVI 597


>gi|314972315|gb|EFT16412.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 1081

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + FIE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPGARDQLRARSNAIRAVRETLLSHDFIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFRTHI---NAYDLELYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTQEMILSAARNAIGGTVVRGRDRTGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANKWHVVTVNEGISRGLGEEVTADTPKEKLIEYANKLGIATMPKWSRGDVVLELHEHVSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVML+T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMLLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|313836706|gb|EFS74420.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314929886|gb|EFS93717.1| lysyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|328907744|gb|EGG27508.1| lysine--tRNA ligase [Propionibacterium sp. P08]
          Length = 1081

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + FIE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPGARDQLRARSNAIRAVRETLLSHDFIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFRTHI---NAYDLELYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTQEMILSAARNAIGGTVVRGRDRTGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANKWHVVTVNEGISRGLGEEVTADTPKEKLIEYANKLGIATMPKWSRGDVVLELHEHVSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVML+T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMLLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|268679216|ref|YP_003303647.1| lysyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617247|gb|ACZ11612.1| lysyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 506

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 90/369 (24%), Positives = 160/369 (43%), Gaps = 29/369 (7%)

Query: 3   QIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     +++  YR+R                R+ I S +R +F E  F+E+++  +
Sbjct: 143 PLPEKFHGLQDKELRYRKRYLDMIMNSDVRKTFKIRSKIVSEIRHFFEERDFLEVETPMM 202

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    YL+ +PE   K+L+  G E +F     +RN   
Sbjct: 203 HPIAGGA-NAKPFVTH---HNALGVDRYLRIAPELYLKRLVVGGFEAVFEINRNFRNEGM 258

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPEYI 168
              H PEFTM+E+Y A+ +Y  LM     +      ++   K   + ++  +       I
Sbjct: 259 DQTHNPEFTMIEFYWAYHNYHDLMHLSEEMFDVLLKKLKLPKKLPYGDIEIDFSKPFRKI 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
               A +    +       +    D   +    Q  G+ V  + +   ++  +    +E 
Sbjct: 319 AFRAALSEIGGV------PDKILDDCQKIIAYIQSKGLSVESNLSLGKLYEELFDLFVEE 372

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP   S LA    ++P   +RFEL+    E+ N  +EL DPI+Q  RF
Sbjct: 373 K--LIDPTFIIDYPIEISPLARRSESNPHIAERFELFIAGREIANGFNELNDPIDQYERF 430

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K++Q K    +E + +DED++  L   +P ++G  MG DRL ML+T   +I +VI  P 
Sbjct: 431 AKQLQAKNAGDDEAHEMDEDYVHALGYGLPPTAGQGMGIDRLTMLLTNEASIKDVILFPA 490

Query: 348 SQS--NQEE 354
            +     +E
Sbjct: 491 MKPLNEADE 499


>gi|256370809|ref|YP_003108634.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009601|gb|ACU52961.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 497

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 26/350 (7%)

Query: 13  DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
           +  YR R              +KR  I   +R Y     ++E+++  LQ  PG     R 
Sbjct: 159 EQRYRMRYLDLIVNDKTKKLFIKRTKIIQYIRNYLNNKGYLEVETPVLQSIPGGAI-ARP 217

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F T     + +  PLYL+ S E   KKL+  G E ++ F+  +RN      H PEFT+LE
Sbjct: 218 FITH---HNALNIPLYLRISNELFLKKLIVGGLESVYEFSRNFRNEGIDKNHNPEFTILE 274

Query: 122 WYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
            Y +++ Y  +M     ++     ++ N+K+    N   +  +  + IT+ ++       
Sbjct: 275 LYVSYKDYFWMMNFIEKLLEYLCIKLYNKKLLKINNKLISFKTPFKKITILDSIKENTGF 334

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL          +   +    ++  +++  +   + +  +I  EK E        T +  
Sbjct: 335 DLSG-------LNEKNIRNICKKLQLKIDKNMGKAKLIEQIFSEKCEKKY--INPTFIMD 385

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P   S L   + +    T+RFEL     E+ N+  EL DPI+Q  RF ++++  +K  N
Sbjct: 386 FPIEMSPLTKKHRSKKGLTERFELIINGNEIANSYSELNDPIDQLKRFREQIKLFEKGDN 445

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           E   ID +F+  L   MP  +GI +G DRL+ML+T    I EV++ P  +
Sbjct: 446 EAMLIDWEFIRSLEFGMPPCAGIGIGIDRLIMLLTNNKCIQEVLFFPQMR 495


>gi|184157279|ref|YP_001845618.1| lysyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|332872864|ref|ZP_08440828.1| lysine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|183208873|gb|ACC56271.1| Lysyl-tRNA synthetase (class II) [Acinetobacter baumannii ACICU]
 gi|322507164|gb|ADX02618.1| Lysyl-tRNA synthetase [Acinetobacter baumannii 1656-2]
 gi|323517143|gb|ADX91524.1| lysyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332738875|gb|EGJ69738.1| lysine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 520

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 163 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETP 222

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 223 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 278

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    N++   A ++       +Q    +     +
Sbjct: 279 GVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLAIDILGTTDVPYQGEVFSFKGPFK 338

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++    V        + + +  E 
Sbjct: 339 KISMFD-----AILENNPQFTPENVGDREFLAKFVREELKEEVKPGFGLGKLQTIVFEET 393

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 394 VETK--LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQA 451

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D +F+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 452 ERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVIL 511

Query: 345 TPFSQ 349
            P  +
Sbjct: 512 FPHMR 516


>gi|54020381|ref|YP_115687.1| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987554|gb|AAV27755.1| lysine--tRNA ligase [Mycoplasma hyopneumoniae 232]
          Length = 556

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 109/369 (29%), Positives = 175/369 (47%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P Q +   N D  YR+R                R+ I S +R +F    F+E+D+ 
Sbjct: 201 LHPLPDQYYGIENPDEKYRKRYLDLLVNSESAKTFRLRSKIISLIRTFFDSQGFLEVDTP 260

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  +  + F T     + + +  YL+ + E   KKLL AG ++++     +RN 
Sbjct: 261 VLQPVLGGAS-AKPFITYY---NSLSQNFYLRIATELPLKKLLVAGFDRVYEIGKIFRNE 316

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y+A+ + E++M    N+ R   E  N    +F   N       + 
Sbjct: 317 GFDSTHNPEFTSIEFYQAYANLEKIMDQTENLFRFLFEKLNLDPANFDFSN-------KK 369

Query: 168 ITVAEAFARYANIDLGTTLDNPDQ--PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           I   E FARY  I++ + L N D    +   L  +A++ G+++        + ++   + 
Sbjct: 370 INFLEKFARYDMIEITSKLMNFDLKSANFADLVEKAKKEGVKIEPFFKKGHLINKFFEKF 429

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  +P   S LA   P +P FT R EL+ C  E  N  DEL DPI+Q 
Sbjct: 430 VEPT--LINPTFIIGHPIEISPLAKSNPNNPNFTLRAELFICGKEFANMFDELNDPIDQL 487

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK +   E   ID +F+  L   MP + G  +G DRL ML+T   +I EVI 
Sbjct: 488 SRFQAQIIEKNQGNQEASEIDNEFVQALEYGMPPAGGCGIGIDRLTMLLTKNESIREVIL 547

Query: 345 TPFSQSNQE 353
            P  +  ++
Sbjct: 548 FPQLKPKKD 556


>gi|71022075|ref|XP_761268.1| hypothetical protein UM05121.1 [Ustilago maydis 521]
 gi|46097762|gb|EAK82995.1| hypothetical protein UM05121.1 [Ustilago maydis 521]
          Length = 947

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 81/379 (21%), Positives = 155/379 (40%), Gaps = 35/379 (9%)

Query: 1   MHQIPSQPWWNR-------DFHYRR----------RPFLLKRNMIQSSLREYFVENQFIE 43
           +  +P     ++         H +R          R   +KR  I + +R +     F+E
Sbjct: 556 LKMLPKASQGDKGGFTDTEQRHRKRYLDLIMNNHVRDIFVKRAKIINYVRRFLDNLGFLE 615

Query: 44  IDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHA 103
           +++  +    G  T  + F T     + ++  L+++ +PE   K+L+  G ++++     
Sbjct: 616 VETPMMNQIAGGAT-AKPFVT---YHNDLKLDLFMRIAPELFLKELVVGGLDRVYEIGRV 671

Query: 104 WRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------- 156
           +RN      H PEF++ E+Y A+     LM    ++I    +          +       
Sbjct: 672 FRNESIDQTHNPEFSICEFYMAYADMYDLMDITESMISGLVKAVTGSYKIKYHPDGKDVE 731

Query: 157 ----VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
                  +  +  +   + +      N+          +  R  L   A +  +  +   
Sbjct: 732 GGREYEIDFSTPWKRFDMIKELEAAMNVRFPPADQLHTEETRKWLSDLAAKHNVDCSEPR 791

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
           T S +  ++  E IE        + +  +P   S LA  +   P   +RFE++    E+C
Sbjct: 792 TSSRLIDKMTGEFIETQC--INPSFIVGHPQVMSPLAKRHRDIPGLCERFEVFVATKEIC 849

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
           NA  EL DP  QR  FE++ ++K +  +E   ID  F+  L   +P + G  +G DRLVM
Sbjct: 850 NAYTELNDPWVQRANFEEQSRQKDQGDDEAQGIDHVFIDALEHGLPPTGGWGLGIDRLVM 909

Query: 332 LVTGANNINEVIWTPFSQS 350
            +T +N+I EV+  P ++ 
Sbjct: 910 FLTDSNSIKEVLAFPANKP 928


>gi|306827767|ref|ZP_07461039.1| lysine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304430085|gb|EFM33122.1| lysine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 497

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 151/366 (41%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFVTH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II+ AA+         +Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    I +    E 
Sbjct: 320 RVHMVDAIKEVTGVDFWPEMTVEE------AIALAKEKQVPLEKHFTSVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + Q K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 491

Query: 345 TPFSQS 350
            P  + 
Sbjct: 492 FPTMKP 497


>gi|262279901|ref|ZP_06057686.1| lysyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262260252|gb|EEY78985.1| lysyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 509

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 162/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 152 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLNNERFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    N+I + A ++       +Q    +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMALTENMIEKLALDILGTTDVPYQGEVFSFKGPYK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++   +V        + + +  E 
Sbjct: 328 KISMFD-----AILENNPQFTPENVGDREFLAQFIREELKEQVKPGFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITEYPAETSPLARRNDDNPHVTDRFEFFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D +F+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 441 ERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVIL 500

Query: 345 TPFSQ 349
            P  +
Sbjct: 501 FPHMR 505


>gi|218281530|ref|ZP_03487959.1| hypothetical protein EUBIFOR_00524 [Eubacterium biforme DSM 3989]
 gi|218217319|gb|EEC90857.1| hypothetical protein EUBIFOR_00524 [Eubacterium biforme DSM 3989]
          Length = 637

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 90/369 (24%), Positives = 156/369 (42%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    +RRR   L            R  I  +++ Y      +E+++ 
Sbjct: 139 LRPLPEKFHGLTDVEERFRRRYVDLIMNPEAKHIALTRPKIIRAIQHYLDGQGLVEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G  +  R F T     + +    YL+ + E   K+L+  G E ++     +RN 
Sbjct: 199 VMQPILGGAS-ARPFVTH---HNTLNMDFYLRIATELPLKRLIVGGLEGVYEIGRLFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
               +H PEFT +E Y A+     +M     +    A  V      ++Q    +  +  +
Sbjct: 255 GMDAMHNPEFTTVEAYVAYSDLHGMMDLIEGLFDSVANEVLGTTDITYQGTQLSLKAPFK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEK 225
            I + +A      +D    +   +          A++  I V    +T   I +    + 
Sbjct: 315 RIHMVDAIKEACGVDFWQDMSYEE------AVKLAEEHDIEVEKIHNTVGHIINLFFEKY 368

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    I   T +  +P   S LA     DPRF  R+EL+ C  E  NA  EL DPI+QR
Sbjct: 369 VEET--IVQPTFVYGHPTSISPLAKKNKKDPRFADRYELFICGHEYANAFSELNDPIDQR 426

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFEK+++ ++   +E   +D D++  L   +P + G+ +G DR VML+T    I EV+ 
Sbjct: 427 ERFEKQLELRELGDDEANEVDTDYVEALEYGLPPTGGVGLGIDRFVMLLTDQRTIREVLL 486

Query: 345 TPFSQSNQE 353
            P  ++  +
Sbjct: 487 FPHMKNLGD 495


>gi|291520197|emb|CBK75418.1| Lysyl-tRNA synthetase (class II) [Butyrivibrio fibrisolvens 16/4]
          Length = 681

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 163/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+++   +R +  E  F+E+++ 
Sbjct: 179 LQILPEKFHGLTDTDMRYRQRYVDLVMNKDSRDVFVKRSLMMKEIRNFLAERDFMEVETP 238

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 239 ILVSNAGGAA-ARPFETHY---NSLNEDVKLRISLELYLKRLIVGGFERVYEIGRVFRNE 294

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+    + R  A +V      S+  +  +     E
Sbjct: 295 GVDTRHNPEFTLMELYQAYTDYEGMMELTETMFRRLAEKVVGSTKISYNGIEIDLGKPFE 354

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  ++A +D  T        D       A++ G+         DI +    E  
Sbjct: 355 RMTMTDAVKKFAGVDFDTI------ADDEAAKAIAREKGVEFEDRHKKGDILNLFFEEFC 408

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +   T +  +P   S L    P DP   +RFEL+    E+CNA  EL DPI+QR 
Sbjct: 409 EEN--LIQPTFITDHPIEISPLTKKKPTDPTKVERFELFINTWEMCNAYSELNDPIDQRE 466

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +        +E    DEDFL  L   MP + GI  G DRL ML+T +  I +V+  
Sbjct: 467 RFAAQDANAAAGDDEAEHTDEDFLNALEIGMPPTGGIGYGLDRLCMLLTDSQAIRDVLLF 526

Query: 346 PFSQS 350
           P  +S
Sbjct: 527 PTMKS 531


>gi|225860691|ref|YP_002742200.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229273|ref|ZP_06962954.1| lysyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254528|ref|ZP_06978114.1| lysyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502499|ref|YP_003724439.1| lysyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|225727166|gb|ACO23017.1| lysyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238094|gb|ADI69225.1| lysyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|327390248|gb|EGE88590.1| lysyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 496

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+        ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADFQDIMDLTEGIIQHAAKSVKGDGPVNYQGTEIKINELFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A      +D    +              A +  + V    T    I +    E 
Sbjct: 320 RVHMVDAIREITGVDFWQDMT------LEEAKAIAAEKKVPVEKHYTEVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVAVSPLAKKNPEDQRFTDRFELFIMTKEYGNAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYIEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|260555931|ref|ZP_05828151.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260410842|gb|EEX04140.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 520

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 163 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETP 222

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 223 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 278

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    N++   A ++       +Q    +     +
Sbjct: 279 GVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLAIDILGTTDVPYQGEVFSFKGPFK 338

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++    V        + + +  E 
Sbjct: 339 KISMFD-----AILENNPQFTPENVGDREFLAKFIREELKEEVKPGFGLGKLQTIVFEET 393

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 394 VETK--LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQA 451

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D +F+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 452 ERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVIL 511

Query: 345 TPFSQ 349
            P  +
Sbjct: 512 FPHMR 516


>gi|222823513|ref|YP_002575087.1| lysyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538735|gb|ACM63836.1| lysyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 500

 Score =  312 bits (799), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 87/368 (23%), Positives = 156/368 (42%), Gaps = 27/368 (7%)

Query: 3   QIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R              + R+ I S +R +F    F+E+++  +
Sbjct: 142 PLPEKYHGLTDIEQRYRKRYLDMIMNSEVRKDFILRSKIVSYIRSFFDNKGFLEVETPMM 201

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    +L+ +PE   K+L+  G E ++     +RN   
Sbjct: 202 HPIAGGA-NAKPFVT---YHNALGVERFLRIAPELYLKRLIVGGFEAVYEINRCFRNEGM 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A+ +Y  LM     +     +  N  K   F     +     E I
Sbjct: 258 DLTHNPEFTTIEFYWAYHNYHDLMDLTEELFAMLLDKLNLDKKLEFDEKIIDFSKSFERI 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T  +A  +Y  +D      +    ++ L+  + ++ G           + + +    +E 
Sbjct: 318 TYKDALKKYGGLD------DELINNKELILKKLKKDGFEANEKLELGHLQAELFDNYVED 371

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L+     D    +RFEL+    E+ N  +EL DP++Q  RF
Sbjct: 372 K--LINPTFVIDFPISISPLSRRSDKDADIAERFELFIAGREIANGFNELNDPLDQYERF 429

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+++ K     E   +DEDF+  L   M  ++G  +G DRLVML+    +I +V+  P 
Sbjct: 430 LKQIEAKNAGDEEACEMDEDFVNALGYAMAPTAGQGIGIDRLVMLLINKKSIRDVVLFPA 489

Query: 348 SQSNQEEI 355
            +  + EI
Sbjct: 490 MRPLKNEI 497


>gi|21909956|ref|NP_664224.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|39932216|sp|Q8K880|SYK_STRP3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|21904145|gb|AAM79027.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
          Length = 497

 Score =  312 bits (799), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 151/366 (41%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFVTH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II+ AA+         +Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    I +    E 
Sbjct: 320 RVHMVDAIKEVTGVDFWPEMTVEE------AIALAKEKQVPLEKHFTSVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + Q K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 491

Query: 345 TPFSQS 350
            P  + 
Sbjct: 492 FPTMKP 497


>gi|260824982|ref|XP_002607446.1| hypothetical protein BRAFLDRAFT_276665 [Branchiostoma floridae]
 gi|229292793|gb|EEN63456.1| hypothetical protein BRAFLDRAFT_276665 [Branchiostoma floridae]
          Length = 593

 Score =  312 bits (799), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 87/378 (23%), Positives = 161/378 (42%), Gaps = 30/378 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   N++  YR+R              + R  I + +R +  E  F+E+++ 
Sbjct: 204 LHMLPHLHFGITNKETRYRQRYLDLIINEHVRDKFIIRARIINYVRRFLDELGFLEVETP 263

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T    ++ +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 264 MMNMDAGGATD-KPFVTH---RNELDMDLYMRVAPELYLKMLIVGGIDRVYEIGRLFRNE 319

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN----------V 157
                H PEFT  E+Y A+  Y  LMK   +++    +      +  Q            
Sbjct: 320 GIDLTHNPEFTTCEFYMAYADYNDLMKITESLLSGMVKHITGGSYKIQYHPEGADSDEVW 379

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +       + +     +   + L        +  R        +  +      T + +
Sbjct: 380 EADFTPPFRRLDMMGDLEKELKVKLPAADTLHTEESRKFFDDLCTRLEVECPPPRTTARL 439

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             +++ + +E          +  +P   S LA  + + P  T+RFEL+    E+CNA  E
Sbjct: 440 LDKLVGDYLEVKA--ISPIFIINHPQIMSPLAKWHRSIPGLTERFELFVMKKEICNAYTE 497

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DP+ QR RFE++ ++K    +E   IDE+F   L   +P ++G  MG DRL M +T +
Sbjct: 498 LNDPMVQRERFEQQAKDKAAGDDEAQLIDENFCTSLEYGLPPTAGWGMGIDRLTMFLTDS 557

Query: 337 NNINEVIWTPFSQSNQEE 354
           NNI EV++ P  + +  +
Sbjct: 558 NNIKEVLFFPAMRPDDTK 575


>gi|315640561|ref|ZP_07895669.1| lysine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483765|gb|EFU74253.1| lysine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 497

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 100/364 (27%), Positives = 162/364 (44%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R               KR+ I S +R Y     ++E+++ 
Sbjct: 146 LRPLPDKYHGLTNVEQRYRQRYLDLISNQESFDRFTKRSKIISEIRRYLDGLGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 206 VLHNQAGGAA-ARPFITH---HNALDIDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M     IIR  A +  +    ++     +  S+  
Sbjct: 262 GIDTTHNPEFTMMECYTAYTDYRDVMDLTEAIIRTVAEKTLDTTSITYGGAPVDLGSDFR 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + +A+A      +D    +              A++  + +        I +      +
Sbjct: 322 RVHMADAVKEKTGVDFWQEMSI------EQARQYAKEHNVEITDAMAVGHILNEFFETFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 376 EET--LQQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFTELNDPIDQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ +E++   +E + +DEDFL  L   MP + G+ +G DRLVML+T A +I +V+  
Sbjct: 434 RFEEQEREREAGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLF 493

Query: 346 PFSQ 349
           P  +
Sbjct: 494 PTMR 497


>gi|57234639|ref|YP_181320.1| lysyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|123746105|sp|Q3Z8X9|SYK_DEHE1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|57225087|gb|AAW40144.1| lysyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 498

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 173/365 (47%), Gaps = 28/365 (7%)

Query: 6   SQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +    +D    YR+R              L R+ + S++R +     F+E+++  LQ  
Sbjct: 142 EKWHGLQDVEKRYRQRYLDLISNADARQTFLTRSQVISAIRSFMSSKGFLEVETPVLQPE 201

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
            G     R F T       +    Y++ + E   K+L+  G ++++     +RN      
Sbjct: 202 AGGA-LARPFITH---HQALDCDFYMRIALELHLKRLIVGGFDRVYEIGRIFRNEGVSTR 257

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVA 171
           H PEFTM+E Y+A+  Y+ +M     ++    +         F +   +       +++ 
Sbjct: 258 HNPEFTMMESYQAYADYKDVMDFLEEMVSSVVKEISGGYTVPFGDTTLDFTPPWPRLSMR 317

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +A  +YA ID        D P +  L  +  +  ++V     W  +   ++ E +EP   
Sbjct: 318 DAVKQYAGID------FFDFPTKEALAAEMIRRKLKVDPAKDWGKLVDELVGEFVEPR-- 369

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   T L  +P   S LA   P DPR T+RFE    N+E+ NA  EL DP+EQR RF+++
Sbjct: 370 LIQPTFLTDHPVAMSPLAKQKPEDPRLTERFEAICANMEIANAFSELNDPVEQRARFKEQ 429

Query: 292 MQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           ++++ ++   E+  IDEDFLA L   MP + G+ +G DRLVML+T  ++I EVI  P  +
Sbjct: 430 LEKRNQLRTEESESIDEDFLAALAYGMPPTGGLGVGIDRLVMLLTNHDSIREVILFPALK 489

Query: 350 SNQEE 354
             +++
Sbjct: 490 DREDK 494


>gi|255319145|ref|ZP_05360363.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262379277|ref|ZP_06072433.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255303791|gb|EET82990.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298734|gb|EEY86647.1| lysyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 509

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 164/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R Y    +F+E+++ 
Sbjct: 152 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRSYLNSERFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM+   N++ + A ++       +Q    N     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMQLTENMLEKLALDILGTTDVPYQGEVFNFKGPYK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++   +V        + + +  E 
Sbjct: 328 KISMFD-----AILEHNPEFTPENVNDREFLAKFVREELKEQVKAGFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITEYPAETSPLARRNNDNPHITDRFEFFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ +++EK    +E    D +F+  L   +P ++G  +G DRLVM+   A +I +VI 
Sbjct: 441 ERFQAQVEEKDAGDDEAMHYDAEFIEALEYGLPPTAGEGIGIDRLVMIFADAPSIRDVIL 500

Query: 345 TPFSQ 349
            P  +
Sbjct: 501 FPHMR 505


>gi|189485651|ref|YP_001956592.1| lysyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287610|dbj|BAG14131.1| lysyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 489

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 105/364 (28%), Positives = 172/364 (47%), Gaps = 36/364 (9%)

Query: 2   HQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +    +D     R+R              +KR+M+ S++R    E  FIE+++  
Sbjct: 148 RPLPEKWHGLKDIEIRCRQRYLDLIANSEVKDIFVKRSMVISAVRHKLEELGFIEVETPI 207

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G   + R F T     + +   L+L+ +PE   K+L+  G +++F     +RN  
Sbjct: 208 LQSLAGGA-NARPFITH---HNALDINLFLRIAPELFLKRLVVGGLDRVFEIGRNFRNEG 263

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTMLE Y+A+  Y  +M     +I+ AA+                  E   +
Sbjct: 264 IDKNHNPEFTMLELYQAYADYNDMMDMSEILIKAAAKKVGS----------ALNLEFTRV 313

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            + +   +YA +DL   +++        ++ Q +   + +A D T   I  ++  EK+ P
Sbjct: 314 KMFDLIKKYAGLDLLPYVESG------KMFEQVKHLNLDLAEDATDRKILDQLFEEKVVP 367

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           N  +   T +  YPA  S L+ +    P   +RFELY   IE+ NA  EL DP  Q+ RF
Sbjct: 368 N--LKNPTFVMDYPAVYSPLSKVKFDQPEIAERFELYISGIEIGNAYSELNDPELQKIRF 425

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++M+ K K  ++  P DEDF+  L   +P + G+ +G DRLVM++TG  +I EVI  P 
Sbjct: 426 TQQMKAKNKGDDKVMPYDEDFIFALEQGLPPTGGLGIGIDRLVMVLTGVESIREVIIFPA 485

Query: 348 SQSN 351
            +  
Sbjct: 486 MRPE 489


>gi|19745706|ref|NP_606842.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|139474193|ref|YP_001128909.1| lysyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|39932219|sp|Q8P1X6|SYK_STRP8 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|73919758|sp|Q5XD62|SYK_STRP6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|166230592|sp|A2RFR7|SYK_STRPG RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|19747842|gb|AAL97341.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|134272440|emb|CAM30696.1| lysyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 497

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 151/366 (41%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFVTH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II+ AA+         +Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    I +    E 
Sbjct: 320 RVHMVDAIKEVTGVDFWPEMTVEE------AIALAKEKQVPLEKHFTSVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + Q K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 491

Query: 345 TPFSQS 350
            P  + 
Sbjct: 492 FPTMKP 497


>gi|209559054|ref|YP_002285526.1| lysyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|238064862|sp|B5XKG9|SYK_STRPZ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|209540255|gb|ACI60831.1| Lysyl-tRNA synthetase (class II) [Streptococcus pyogenes NZ131]
          Length = 497

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 151/366 (41%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFVTH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II+ AA+         +Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    I +    E 
Sbjct: 320 RVHMVDAIKEVTGVDFWPEMTVEE------AIALAKEKQVPLEKHFTSVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + Q K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 491

Query: 345 TPFSQS 350
            P  + 
Sbjct: 492 FPTMKP 497


>gi|302343542|ref|YP_003808071.1| lysyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301640155|gb|ADK85477.1| lysyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 513

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 154/365 (42%), Gaps = 25/365 (6%)

Query: 2   HQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R                R+ I +++R +  E  F+E+++  
Sbjct: 159 RSLPEKFHGLTDVEQRYRQRYLDLIMNDEVRGIFTARSKIVNTIRGHLTELGFMEVETPM 218

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +Q  PG  T  R F T     + +   LYL+ +PE   K+L+  G E++F     +RN  
Sbjct: 219 MQVIPGGAT-ARPFET---YHNALGMKLYLRVAPELYLKRLVVGGLERVFELNRNFRNEG 274

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTMLE+Y ++ SYE LM     ++   A   +  +           + P   
Sbjct: 275 ISIRHNPEFTMLEFYMSYASYEDLMSITEQMLGACAMAVHGSLKFDYQGRQIDLTPP--- 331

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              E     +++            D       +   G +    D      ++I    +EP
Sbjct: 332 --WENLDFRSSLLEIGKAPPEVLFDIEKAMNMSAHLGGQHKTGDNIGKALAKIFDVTVEP 389

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +  +   T +  YP   S L+     DP    RFE +    E+ N   EL DP +QR RF
Sbjct: 390 H--LWQPTFITGYPRDISPLSRTNDLDPDIVDRFEFFIAGREMGNGFSELNDPDDQRERF 447

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             ++ E++   +E   +D D++  L   MP ++G  +G DRLVML+T   +I EVI  P 
Sbjct: 448 FAQVAEREAGDDEAQFMDADYVRALEYGMPPTAGEGVGIDRLVMLLTDQPSIREVILFPL 507

Query: 348 SQSNQ 352
            +  Q
Sbjct: 508 LRPEQ 512


>gi|320164122|gb|EFW41021.1| lysyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 551

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 83/378 (21%), Positives = 151/378 (39%), Gaps = 30/378 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P+  +  +D    YR+R              + RN I + LR +  +  F+E+++ 
Sbjct: 163 LRVLPTLHFGLKDQELRYRQRYLDLMLNDATRNKFVVRNKIINYLRRFLDQLGFLEVETP 222

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K+L+  G ++++     +RN 
Sbjct: 223 MMNMIAGGAT-AKPFITH---HNDLNMNLFMRIAPELYLKQLVVGGLDRVYEIGRQFRNE 278

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--------NC 159
                H PEFT  E+Y A+  Y  LM     ++    +          +           
Sbjct: 279 GIDLTHNPEFTTCEFYMAYADYNDLMSITETLLSGMVKYITGGYVIEYHPQGPTEPAIKI 338

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +        ++     +  N+                L     +  +      T + +  
Sbjct: 339 DFTPPFRRFSMIADLEKKLNVKFPPADQLLSDSTNKFLSELCIKHNVECTPPRTSARLLD 398

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRFTKRFELYACNIELCNACDE 277
           +++ + +E        T +  +P   S      ++ + P  T+RFEL+    E+CNA  E
Sbjct: 399 KLVGDFLEVEC--INPTFICDHPQLMSPLAKWYVHRSIPGLTERFELFVSKKEVCNAYTE 456

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DPI QR  F+ + ++K    +E   IDE F   L   +P + G  MG DRL M +T +
Sbjct: 457 LNDPIYQRKMFDDQAKDKAAGDDEAQVIDEVFCTSLEFGLPPTGGWGMGLDRLTMFLTDS 516

Query: 337 NNINEVIWTPFSQSNQEE 354
           NNI EV+  P  +    E
Sbjct: 517 NNIKEVLLFPAMKPEINE 534


>gi|154311528|ref|XP_001555093.1| hypothetical protein BC1G_06223 [Botryotinia fuckeliana B05.10]
 gi|150850734|gb|EDN25927.1| hypothetical protein BC1G_06223 [Botryotinia fuckeliana B05.10]
          Length = 607

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 84/370 (22%), Positives = 154/370 (41%), Gaps = 26/370 (7%)

Query: 2   HQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
            Q+P + +  +D    +R+R             L+ R+ + + +R YF    F E+++  
Sbjct: 221 QQLPDEYYGFKDNEKRHRQRYLDLIMNDASRKVLMTRSDMTAYIRNYFNSRDFKEVETPM 280

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G  T  + F T     + +   ++++ +PE   K L+  G  +++     +RN  
Sbjct: 281 MNSIAGGAT-AKPFKTH---HNDLNMDMFMRIAPELYLKMLVVGGMNRVYEMGRQFRNEG 336

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNPF 162
               H PEFT  E+Y A+      M     ++    +       +  +         N  
Sbjct: 337 IDLTHNPEFTTCEFYMAYADVYDTMDMTEELVSGLVKHITGGTTTKFHTQHGEEYEVNWA 396

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
           +  + I +  A             +              ++  +  +   T + +  +++
Sbjct: 397 APWKRIEMIPALEEATGEKFPPADELHTDESNEFFKRVLKKMKVECSPPLTNARMLDKLV 456

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
            E IE        T +  +P   S LA  + + P   +RFE + C  E+ NA  EL DP 
Sbjct: 457 GEFIEETC--INPTFITEHPKMMSPLAKNHRSKPGLCERFEAFVCKKEIVNAYTELNDPF 514

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           EQR RFE++ ++K +  +E   IDE+F+  L   +P ++G  MG DRLVM +T   +I E
Sbjct: 515 EQRLRFEEQARQKDQGDDEAQMIDENFVRALEFGLPPTAGWGMGIDRLVMFLTDNYSIKE 574

Query: 342 VIWTPFSQSN 351
           V+  PF +  
Sbjct: 575 VLTFPFMKEE 584


>gi|71903140|ref|YP_279943.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71802235|gb|AAX71588.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 501

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 151/366 (41%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 148 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 208 VLHNEAGGAA-ARPFVTH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II+ AA+         +Q          +
Sbjct: 264 GMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFK 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    I +    E 
Sbjct: 324 RVHMVDAIKEVTGVDFWPEMTVEE------AIALAKEKQVPLEKHFTSVGHIINAFFEEF 377

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 378 VEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTELNDPIDQL 435

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + Q K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 436 SRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 495

Query: 345 TPFSQS 350
            P  + 
Sbjct: 496 FPTMKP 501


>gi|222099867|ref|YP_002534435.1| Lysyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572257|gb|ACM23069.1| Lysyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 502

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 157/367 (42%), Gaps = 30/367 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R               KR      +RE+     F+E+++ 
Sbjct: 137 LRPLPEKWHGIKDKEIIYRQRYLELIMSDEAIERFKKRFEAMRVIREFLNSRGFVEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L Y  G     R F T L   +     +YL+ +PE   K+L+  G EKI+     +RN 
Sbjct: 197 ILHYVTGGA-EARPFVTHL---NVFDVDMYLRIAPELYLKRLIVGGFEKIYEIGKNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +I             ++Q    +      
Sbjct: 253 GISYKHSPEFTSIEIYQAYADYNDMMNLTEELIVEVVKRTCGTLKITYQGKEIDFTPPWR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +       +D+    D        +L  + ++ G+ V      + +  ++     
Sbjct: 313 RVRMRDFLKEKLGVDILEDSD-------EVLLKKLEEHGVEV-EIKNRAHLIDKLRDIVE 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA  +  DPR T+RFEL     E+ NA  EL DPI+Q  
Sbjct: 365 EE---LVNPTFIIDHPVDISPLAKRHREDPRLTERFELIIFGREIANAFSELNDPIDQYQ 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++M+ +++   E + +D DF+  L   MP + G+ +G DRL M +T +  I ++I  
Sbjct: 422 RFLEQMKMREEGDEEAHMMDLDFVRALEYGMPPTGGLGIGLDRLFMFITDSPTIRDIIPF 481

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 482 PLVKPKK 488


>gi|255580096|ref|XP_002530880.1| lysyl-tRNA synthetase, putative [Ricinus communis]
 gi|223529533|gb|EEF31486.1| lysyl-tRNA synthetase, putative [Ricinus communis]
          Length = 607

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 82/365 (22%), Positives = 156/365 (42%), Gaps = 28/365 (7%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R+ I + +R +     F+E+++  +    G   
Sbjct: 245 LKDQETRYRQRYLDLMLNLEVRQIFKTRSRIITYIRSFLDSLDFLEVETPMMNMIAGGAA 304

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   L+++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 305 -ARPFVTH---HNELNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 360

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A   Y  LM+    ++    +          +        +  +       I 
Sbjct: 361 TTCEFYMAFADYNDLMELTERLLSGMVKELTGGHKIKYHANGLEKDPIEIDFTPPFRRID 420

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E   + AN+++   L + +      L    ++  ++     T + +  +++   +E  
Sbjct: 421 MIEELEKMANLNIPKDLTSDEAN--KYLVAACERFEVKCPPPQTTARLLDKLVGHFLEET 478

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL DP+ QR RF 
Sbjct: 479 CV--NPTFIINHPEIMSPLAKWHRSRPGLTERFELFMNKHEVCNAYTELNDPVVQRERFA 536

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++++++   +E   +DE F   L   +P + G  MG DRL M++T + NI EV+  P  
Sbjct: 537 DQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMILTDSQNIKEVLLFPAM 596

Query: 349 QSNQE 353
           +   E
Sbjct: 597 KPQDE 601


>gi|319946598|ref|ZP_08020832.1| lysine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746646|gb|EFV98905.1| lysine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 496

 Score =  311 bits (798), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 154/365 (42%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLSDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDGQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAS-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E  +A+  Y+ +M     II+ AA+  +     ++Q          +
Sbjct: 260 GMDATHNPEFTSIEVDQAYADYQDIMDLTEGIIQHAAKAIHGDGPVNYQGTEIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEK 225
            + + +A    A +D    +              A++  + V    T    I +    E 
Sbjct: 320 RVHMVDAIKEIAGVDFWQDMS------FEEAVALAKEKHVPVEKHYTEVGHIINAFFEEY 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LTQPTFVYGHPVAVSPLAKKNDEDPRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 ERFEAQARAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|299771104|ref|YP_003733130.1| lysyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701192|gb|ADI91757.1| lysyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 509

 Score =  311 bits (798), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 162/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 152 LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLNNERFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 212 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM+   N++ + A ++       +Q    +     +
Sbjct: 268 GVSTRHNPEFTMIEFYQAYADYKDLMQLTENMLEKLALDILGTTDVPYQGEVFSFKGPFK 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++   +V        + + +  E 
Sbjct: 328 KISMFD-----AILENNPQFTPENVGDREFLAQFIREELKEQVKPGFGLGKLQTIVFEET 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +   T RFE +    EL N   EL DPI+Q 
Sbjct: 383 VETK--LRQPTFITEYPAETSPLARRNDDNAHITDRFEFFIGGRELANGFSELNDPIDQA 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D +F+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 441 ERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVIL 500

Query: 345 TPFSQ 349
            P  +
Sbjct: 501 FPHMR 505


>gi|28896347|ref|NP_802697.1| lysyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|28811598|dbj|BAC64530.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 501

 Score =  311 bits (798), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 151/366 (41%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 148 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 208 VLHNEAGGAA-ARPFVTH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II+ AA+         +Q          +
Sbjct: 264 GMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFK 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    I +    E 
Sbjct: 324 RVHMVDAIKEVTGVDFWPEMTVEE------AIALAKEKQVPLEKHFTSVGHIINAFFEEF 377

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 378 VEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTELNDPIDQL 435

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + Q K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 436 SRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 495

Query: 345 TPFSQS 350
            P  + 
Sbjct: 496 FPTMKP 501


>gi|66812996|ref|XP_640677.1| lysine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|60468698|gb|EAL66700.1| lysine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 551

 Score =  311 bits (797), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 79/374 (21%), Positives = 153/374 (40%), Gaps = 30/374 (8%)

Query: 1   MHQIP--SQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P  +    + +  +R+R              + R+ +   +R Y     FIE+++ 
Sbjct: 165 LHMLPKAASGLTDPETRFRQRYLDMICNESVKKNFIIRSKVIQGVRRYLDNLGFIEVETP 224

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   L+++ +PE   K+L+  G ++++     +RN 
Sbjct: 225 MMNMIAGGAA-AKPFLTH---HNALNMDLFMRIAPELYLKQLVVGGMDRVYEIGKQFRNE 280

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--------NC 159
           +    H PEFT  E+Y A+  Y  L      +++      +  +    +           
Sbjct: 281 DIDHTHNPEFTTCEFYMAYADYNDLYTMTEQLLQSIVMSIHGSLKIKYHPDGPSGKEIEI 340

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  S    I +           + T   + +   R  L    ++  +  +   T + +  
Sbjct: 341 DFSSPWRKIDMIADLEAIIGEKIPTPYTSEEC--REFLVKTCRERKVECSAPQTTARLLD 398

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S L+  +   P+ T+RFEL+    E+CNA  EL 
Sbjct: 399 KLVGEYLEVQC--INPTFIINHPEIMSPLSKYHREKPQLTERFELFVNTKEICNAYTELN 456

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           +P  Q  RF ++ + K    +E+  ID+ F   L   +P + G  +G DR  ML++   N
Sbjct: 457 NPFVQIERFAEQAKAKAAGDDESMLIDKVFTTSLEYGLPPTGGFGLGIDRFAMLMSDTYN 516

Query: 339 INEVIWTPFSQSNQ 352
           I EVI  P  +  Q
Sbjct: 517 IKEVILFPAMKPEQ 530


>gi|152992078|ref|YP_001357799.1| lysyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151423939|dbj|BAF71442.1| lysyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 547

 Score =  311 bits (797), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 87/367 (23%), Positives = 154/367 (41%), Gaps = 28/367 (7%)

Query: 3   QIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R              + R+ I S +R +F ++ F+E+++  +
Sbjct: 146 PLPEKFHGLTDHEIRYRQRYLDMIMNPEVKETFIMRSKIVSLIRRFFEDHSFLEVETPMM 205

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              PG   + + F T     + +    YL+ +PE   K+L   G E +F     +RN   
Sbjct: 206 HPIPGGA-NAKPFVTH---HNALGVDRYLRIAPELYLKRLTVGGMEAVFEINRNFRNEGM 261

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A+ +Y  LM+    +           K  ++     +  +    +
Sbjct: 262 DQTHNPEFTSIEFYWAYHNYLDLMRLTEELFEYIFAQLQMDKTITYGEYEIDCSTPFAKV 321

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              EA      +             R       ++ G+ V  + T   + + +  E +E 
Sbjct: 322 PFVEALTSIGEV------PAEVATGREKAIAYLKEHGVEVNPNLTLGYLQAELFDEFVEG 375

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP   S L+     +P   +RFEL+    E+ N  +EL DPI+Q  RF
Sbjct: 376 K--LINPTFITDYPIDISPLSRRSDDNPEIAERFELFMAGKEIANGFNELNDPIDQFERF 433

Query: 289 EKEMQEKKK-IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + +   K+     ET  +D DF+  L   M  ++G  +G DRLVM++T  ++I +VI  P
Sbjct: 434 KAQADAKEATGDEETMHMDLDFIRALGHGMTPTAGEGIGIDRLVMMLTDNHSIRDVILFP 493

Query: 347 FSQSNQE 353
             +   +
Sbjct: 494 AMKPEAK 500


>gi|313889970|ref|ZP_07823607.1| lysine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121628|gb|EFR44730.1| lysine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 496

 Score =  311 bits (797), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 153/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFNRFVTRSRIISEIRRYLDSKDFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  ++ +M     II+ AA+    +    +Q    +     +
Sbjct: 260 GMDATHNPEFTSIEVYEAYADFQDIMNLTEGIIQHAAKAVTGEGPIDYQGQLIHINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
            + + +A      ID    +              AQ+  + +  H  T   I +    E 
Sbjct: 320 RLHMVDAIKEVTGIDFWKEMS------FEEARTLAQEKHVPLEAHFTTVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVEVSPLAKKNAEDARFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + + K+   +E   ID D++  L   MP + G+ +G DRL ML+T   +I +V+ 
Sbjct: 432 SRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTNTTSIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|302524477|ref|ZP_07276819.1| lysyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302433372|gb|EFL05188.1| lysyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 1103

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 155/365 (42%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     + +   R+R             L  R+ +  ++RE   ++ F+E+++ 
Sbjct: 745  LHPLPDKRKGLTDPETRVRQRYLDLAVNPDSANMLRLRSTVVRAVRERLHKDDFLEVETP 804

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     +YL+ +PE   K+L  AG E++F     +RN 
Sbjct: 805  MLQTIHGGA-NARPFVTHI---NAYDMRMYLRIAPELYLKRLCVAGVERVFELNRNFRNE 860

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y  +     ++I+ AAE A       +        E + 
Sbjct: 861  GVDATHNPEFTMLEAYQAYADYNAMRHLMRDLIQYAAEAAYGAQIVRRPDADGRIVEHDI 920

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +      +         L      AG+ V  D +  D+  +     +E
Sbjct: 921  SGDWPVIPVHKAVSDALGEEIDSHTPIATLRKLCAAAGVPVPEDASAGDLVLKAHEHLVE 980

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
             +  +   T    YP   S L   +  DP   +R++L A   E+  A  EL DP+EQR R
Sbjct: 981  GSTVL--PTFYTDYPTEVSPLTRQHRTDPLLAERWDLIAFGSEVGTAYTELTDPLEQRRR 1038

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E +         E   +DEDFL  L   MP + G+ +G DRL+M+++G  +I + +  P
Sbjct: 1039 LEAQSLRAASGDVEAMELDEDFLLALEHGMPPTGGLGLGVDRLLMMLSGT-SIRQTVLFP 1097

Query: 347  FSQSN 351
            F +  
Sbjct: 1098 FVRPQ 1102


>gi|226226985|ref|YP_002761091.1| lysyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090176|dbj|BAH38621.1| lysyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 523

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 93/340 (27%), Positives = 153/340 (45%), Gaps = 16/340 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H   R     R+++  ++R +     ++E+++  LQ   G     R F T     + + 
Sbjct: 198 VHPEVRALFRARSVLTRAVRSHLDGLGYLEVETPVLQPLYGGAA-ARPFVTH---HNALD 253

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
            PLYL+ + E   K+L+  G E+++   H +RN      H PEFTMLE+Y A   Y  +M
Sbjct: 254 MPLYLRIADELYLKRLIVGGFERVYEIGHDFRNEGIDRTHNPEFTMLEFYEAFADYTTMM 313

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
               ++I  AA+     I        +  +    I    + ++ A +D+    D      
Sbjct: 314 SRVESLIMAAADAIRG-IPGVGEKIPSFVTPFPRIEWVPSLSKAAGVDVMAVSD------ 366

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
              L   A++ G++     +   +   +    +E    I+  T +  YP   S LA    
Sbjct: 367 -AELRALAERIGVQKVATLSRPKVLDEMFQALVESK--IDQPTFVLDYPKELSPLAKPKR 423

Query: 254 ADP-RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             P   T+RFEL+A   EL NA  EL DPI+QR RFE + + +    +E   +D+D+L  
Sbjct: 424 GGPDGITERFELFAKGKELANAFSELNDPIDQRERFEAQARLRDAGDDEASGVDDDYLRA 483

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           +   MP + G+ +G DRL M +T   NI +VI  P  +  
Sbjct: 484 MEYGMPPTGGVGIGIDRLFMYLTDTQNIRDVILFPTMRPE 523


>gi|297833954|ref|XP_002884859.1| hypothetical protein ARALYDRAFT_478516 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330699|gb|EFH61118.1| hypothetical protein ARALYDRAFT_478516 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 625

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 156/366 (42%), Gaps = 28/366 (7%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R  I S +R +     F+E+++  +    G   
Sbjct: 255 LKDQESRYRQRYLDLMLNVEVRQIFKTRAHIISYIRRFLDNKNFLEVETPMMNMIAGGAA 314

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LY++ +PE   K+L+  G E+++     +RN      H PEF
Sbjct: 315 -ARPFVTH---HNDLDMRLYMRIAPELFLKQLIVGGLERVYEIGKQFRNEGIDLTHNPEF 370

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A   Y  LMK   +++    +          +        +  +       I 
Sbjct: 371 TTCEFYMAFADYNDLMKMTEDMLSGMVKELTGGYKIKYHANGYDKDPIEIDFKPPFRRIE 430

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           +     + AN+++   L + +      L     +  ++     T + +  +++ E +E  
Sbjct: 431 MIGELEKVANLNIPKDLASEEAN--KYLIDACARFDVKCPPPQTTARLLDKLVGEFLEVT 488

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 T +  +P   S LA  + ++   T+RFEL+    ELCNA  EL DP+ QR RF 
Sbjct: 489 CV--NPTFIINHPEIMSPLAKWHRSNNVLTERFELFINKHELCNAYTELNDPVVQRQRFA 546

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++++++   +E   +DE F + L   +  + G  +G DRL ML T + NI EVI  P  
Sbjct: 547 DQLKDRQSGDDEAMALDETFCSALEYGLAPTGGWGLGIDRLAMLFTDSQNIKEVILFPAM 606

Query: 349 QSNQEE 354
           +  Q+E
Sbjct: 607 RPPQDE 612


>gi|329117573|ref|ZP_08246290.1| lysine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907978|gb|EGE54892.1| lysine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 500

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 151/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 148 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGMDFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 208 VLHNEAGGAA-ARPFVTH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     II+ AA          +Q          +
Sbjct: 264 GMDATHNPEFTSIEVYQAYADYQDIMNLTEGIIQHAANAVKGDGPIDYQGNEILINQPFK 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      ID    +   D          A++  + +    T    I +    E 
Sbjct: 324 RVHMVDAIKEVTGIDFWPEMSIEDAL------ALAKEKHVPLEKHFTSVGHIINAFFEEF 377

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 378 VEET--LIQPTFVFGHPVEVSPLAKKNPEDGRFTDRFELFIMTKEYANAFTELNDPIDQL 435

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + Q K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 436 SRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 495

Query: 345 TPFSQ 349
            P  +
Sbjct: 496 FPTMK 500


>gi|50913862|ref|YP_059834.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|50902936|gb|AAT86651.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 501

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 151/366 (41%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 148 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 208 VLHNEAGGAA-ARPFVTH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II+ AA+         +Q          +
Sbjct: 264 GMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFK 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    I +    E 
Sbjct: 324 RVHMVDAIKEVTGVDFWPEMTVEE------AIALAKEKQVPLEKHFTSVGHIINAFFEEF 377

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 378 VEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTELNDPIDQL 435

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + Q K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 436 SRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 495

Query: 345 TPFSQS 350
            P  + 
Sbjct: 496 FPTMKP 501


>gi|270157122|ref|ZP_06185779.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289164473|ref|YP_003454611.1| lysyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269989147|gb|EEZ95401.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288857646|emb|CBJ11486.1| putative lysyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 497

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 89/364 (24%), Positives = 155/364 (42%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              L R+ +  +LR++  ++ F+E+++ 
Sbjct: 144 LRPLPDKFHGLADQEMRYRKRYVDLIANDESRLTFLIRSRLIQALRQFMDKSFFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T       +   +YL+ +PE   K+L+  G E+++     +RN 
Sbjct: 204 MMHPIPGGA-LARPFVTH---HHTLDMTMYLRIAPELYLKRLVVGGFERVYEINRNFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM     +IR   +   ++    +Q    +      
Sbjct: 260 GISTRHNPEFTMVEFYQAYADYKDLMNFTEEMIRYLCDSVLERRQVEYQGQILDFDKPFT 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV EA   Y        ++              ++  +     D    +   +  E +
Sbjct: 320 RMTVKEAILHY-----HPEINVNQLESVVACRALLKEKKLPFKETDGIGKLQIILFEETV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA     DP  T RFE +    E+ N   EL D  +Q  
Sbjct: 375 EHQ--LFQPTFITGYPTEISPLARRSDQDPELTDRFEFFIAGREIANGFSELNDAEDQAE 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K++ EK     E    D D++  L   +P ++G  +G DRLVML T + +I +VI  
Sbjct: 433 RFRKQVAEKDAGDMEAMHFDSDYIEALEYGLPPTAGEGIGIDRLVMLFTNSQSIRDVILF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PHLR 496


>gi|310778303|ref|YP_003966636.1| lysyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747626|gb|ADO82288.1| lysyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 494

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 158/365 (43%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              +KR  I +S++       F+E+++ 
Sbjct: 139 IRPLPEKYHGLTDVETRYRKRYLDLVMNKEVKETFVKRIQIVNSVKTLLNSKGFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  + F T     + +   LYL+ +PE   K+L+  G +K++    ++RN 
Sbjct: 199 IMHPIVGGAS-AKPFVTH---HNTLDMTLYLRIAPELYLKRLIVGGFDKVYEINRSFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E Y+A+  +  +M     II  AA+  N       N         + 
Sbjct: 255 GISTRHNPEFTMMELYQAYADFNDMMDLTEEIIMNAAKTINGTTTVEYNGKELVLENFKR 314

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEKI 226
           + + +        D    +   D        L A+Q  + +A        I +    +K 
Sbjct: 315 VHMVDFVKEITGADFWGDVSVED------ARLLAKQNNVVLAPHMNTVGHIINEFFEQKC 368

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  I   T +  +P   S LA     D RFT RFEL+    E  NA  EL DP +QR 
Sbjct: 369 EEH--IIQPTFVYGHPVEISPLAKRNADDHRFTDRFELFIDAREYANAFSELNDPADQRG 426

Query: 287 RFEKEMQEKKKIYNETY-PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           R E +++E      E    ID+D++  L   MP + G+ +G DRLVML+TGA +I +VI 
Sbjct: 427 RLEAQLEEAMLGNEEANAEIDDDYIEALEYGMPPTGGLGVGIDRLVMLLTGAPSIRDVIL 486

Query: 345 TPFSQ 349
            P  +
Sbjct: 487 FPQMR 491


>gi|94988116|ref|YP_596217.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94989997|ref|YP_598097.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94992003|ref|YP_600102.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94993910|ref|YP_602008.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|251782024|ref|YP_002996326.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|94541624|gb|ABF31673.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94543505|gb|ABF33553.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94545511|gb|ABF35558.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94547418|gb|ABF37464.1| Lysyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|242390653|dbj|BAH81112.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 501

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 151/366 (41%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 148 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 208 VLHNEAGGAA-ARPFVTH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II+ AA+         +Q          +
Sbjct: 264 GMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFK 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    I +    E 
Sbjct: 324 RVHMVDAIKEVTGVDFWPEMTVEE------AIALAKEKQVPLEKHFTSVGHIINAFFEEF 377

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 378 VEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTELNDPIDQL 435

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + Q K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 436 SRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 495

Query: 345 TPFSQS 350
            P  + 
Sbjct: 496 FPTMKP 501


>gi|313115333|ref|ZP_07800808.1| lysyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622364|gb|EFQ05844.1| lysyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 503

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 159/368 (43%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              +KR+ I   +R Y  E  F+E+D+ 
Sbjct: 148 LRPLPEKFHGLTDTEMRYRQRYVDLIANPEVKDTFVKRSQILKEIRAYLDEKGFLEVDTP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L       +  R F T     + +   + L+   E   K+L+  G ++++     +RN 
Sbjct: 208 ILTPFEIGAS-ARPFYTH---HNSLNMDMVLRIETELYLKRLIVGGMDRVYEVGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A   +  +M     + +  A+     +              E 
Sbjct: 264 GMDPKHNPEFTSIELYQAFTDFHGMMDLVEELYKRLAQKICGSMVIPYQGKQIDMGHWER 323

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +T+ EA  +Y+ +D      + D          A++  + +    T   I +      +E
Sbjct: 324 LTMVEAVKKYSGVDFNDWKSDED------AIAAAKEHHVELPEVPTKGSILAEFFDAFVE 377

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA   P DP FT+RFE +    E  NA  EL DPI+Q+ R
Sbjct: 378 DK--LIQPTFIYDYPVEISPLAKRKPDDPAFTERFEYFIDCTEYGNAFSELNDPIDQKGR 435

Query: 288 FEKEMQEKKKIY-NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE+++ E+K I  +    +D D++  L   +P + G+  G DRLVML+T + +I +V+  
Sbjct: 436 FERQVAERKAIEPDCKAQVDYDYVNALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLF 495

Query: 346 PFSQSNQE 353
           P  +  ++
Sbjct: 496 PTMKPIEQ 503


>gi|126641048|ref|YP_001084032.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 428

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 160/365 (43%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  + + +R +    +F+E+++ 
Sbjct: 71  LRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETP 130

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  PL+L+ +PE   K+L+  G E++F     +RN 
Sbjct: 131 MMHVIPGGAS-ARPFETH---HNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNE 186

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y+ LM    N++   A ++       +Q    +     +
Sbjct: 187 GVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLAIDILGTTDVPYQGEVFSFKGPFK 246

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIEK 225
            I++ +     A ++        +  DR  L     ++    V        + + +  E 
Sbjct: 247 KISMFD-----AILENNPQFTPENVGDREFLAKFVREELKEEVKPGFGLGKLQTIVFEET 301

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YPA  S LA     +P  T RFE +    EL N   EL DPI+Q 
Sbjct: 302 VETK--LRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQA 359

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK    +E    D +F+  L   +P ++G  +G DRLVML   A +I +VI 
Sbjct: 360 ERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVIL 419

Query: 345 TPFSQ 349
            P  +
Sbjct: 420 FPHMR 424


>gi|313682289|ref|YP_004060027.1| lysyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313155149|gb|ADR33827.1| lysyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 505

 Score =  310 bits (795), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 82/364 (22%), Positives = 150/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S  R +F +  F+E+++ 
Sbjct: 142 ISPLPEKFHGIQDKEMRYRQRYLDLIMNSEVRKTFHIRSKVISLTRRFFEDKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G   + + F T     + +    YL+ +PE   K+L+  G E +F     +RN 
Sbjct: 202 MMHPIAGGA-NAKPFVTH---HNALGIDRYLRIAPELYLKRLIVGGFEAVFEINRNFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A ++Y+ L+           +  +             F +   
Sbjct: 258 GMDATHNPEFTSIEFYWAFKTYKDLISITKEYFEYLFDHLDLPKRLPYGELEVDFDQFSE 317

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I + ++ +    +            D+  +    +   +          +   +  E +E
Sbjct: 318 IELVKSLSVIGGV------PEEIVNDKDSILAFLKSKNLEANAAMNLGQLQGELFDEFVE 371

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA      P  T RFEL+    E+ NA  EL DP++Q  R
Sbjct: 372 AK--LINPTFITHYPVEISPLARRNDERPELTDRFELFIAGREIANAFSELNDPVDQLGR 429

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE +M  K    +E + +DEDF+  L   M  ++G  +G DRLVM++T  ++I +V+  P
Sbjct: 430 FEGQMAAKDSGDDEAHEMDEDFVTALSYGMAPTAGQGIGIDRLVMMLTNQHSIRDVLLFP 489

Query: 347 FSQS 350
             + 
Sbjct: 490 AMKP 493


>gi|297171257|gb|ADI22264.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF0200_36I24]
          Length = 514

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 95/373 (25%), Positives = 165/373 (44%), Gaps = 41/373 (10%)

Query: 1   MHQIP---------------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLRE 34
           +  +P                    +++  YR+R                R  I + LR 
Sbjct: 149 LRPLPLGKTEIDREKGDATTFSGLTDKEARYRQRYADLAVNPSVREVFRTRAKIIAELRS 208

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +  E  F+E+++ +LQ   G     R F T     + + + LYL+ + E   K+L+  G 
Sbjct: 209 FLDELGFLEVETPALQPLYGGAA-ARPFVT---KHNKLDRDLYLRIADELYLKRLIVGGL 264

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFS 153
           EK++     +RN      H PEFTMLE+Y+A   Y  LM     ++ + A          
Sbjct: 265 EKVYEICKDFRNEGMDRFHNPEFTMLEFYQAFIDYRGLMDLTEKMLSQVALVATGSTDVI 324

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
           +Q    +     + + + +  +    +D+              L+  A++  I       
Sbjct: 325 YQGQEIDFAPPYQRVPMLDKLSEVMGLDVRG-------LSVAELHDHAEKLNIPGLDGAG 377

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           W  +  ++  E ++P+  +   T +  +P   S LA  +   P  T+RFEL+    E+CN
Sbjct: 378 WGKVVDKLFSELVQPS--LVQPTFVMDHPKDISPLAKSHRDKPDLTERFELFIAGEEICN 435

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
           A  EL DPI+QR RFE +++ ++   +ET+P+DED++  L   MP + G+ MG DRL M+
Sbjct: 436 AFSELNDPIDQRERFENQIKLREAGDDETHPLDEDYIRALEYGMPPTGGLGMGIDRLTMI 495

Query: 333 VTGANNINEVIWT 345
           +T   +I +VI  
Sbjct: 496 LTDQVSIRDVILF 508


>gi|256827724|ref|YP_003151683.1| lysyl-tRNA synthetase (class II) [Cryptobacterium curtum DSM 15641]
 gi|256583867|gb|ACU95001.1| lysyl-tRNA synthetase (class II) [Cryptobacterium curtum DSM 15641]
          Length = 771

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 89/368 (24%), Positives = 153/368 (41%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I S+ R Y  +  + E ++ 
Sbjct: 148 IRPLPEKFHGLTDKETRYRQRYVDLVVNPQVKQVFINRSKIISACRTYMAQEGYYEAETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + + F T     + + +  YL+ + E   K+LL  G ++++     +RN 
Sbjct: 208 ILQEIMGGA-NAKPFITHF---NALNQECYLRIATELHLKRLLVGGMDRVYEIGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A      + + C   ++         +I ++Q  + +   E  
Sbjct: 264 GMDLTHNPEFTTMEAYCAFSDLAGMKQLCEGFVKAGLHAVCDSEIITYQGTSIDLSGEWR 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++AE  +                      +L   + G+    D     +   +  E  
Sbjct: 324 SVSMAELVSEVVG------ETVDIDTPPETYHLIFDRFGLEWKQDWGSGKLMFELYDELC 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S LA   P DPR T RFEL     E  NA  EL DP++Q  
Sbjct: 378 ERT--LVNPTFVCDYPVEVSPLAKRKPKDPRLTDRFELVIAGHEYANAFTELNDPVDQES 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +M+ K+    E    D D++  L   MP + GI +G DRLVML+T + +I +V+  
Sbjct: 436 RFAAQMEAKRHGDEEAMEYDTDYVRALEYGMPPAGGIGIGIDRLVMLLTDSVSIRDVLLF 495

Query: 346 PFSQSNQE 353
           P  +  + 
Sbjct: 496 PHMRPERN 503


>gi|166229888|sp|Q4AAC7|SYK_MYCHJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|144227509|gb|AAZ44294.2| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 491

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 109/369 (29%), Positives = 175/369 (47%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P Q +   N D  YR+R                R+ I S +R +F    F+E+D+ 
Sbjct: 136 LHPLPDQYYGIENPDEKYRKRYLDLLVNSESAKTFRLRSKIISLIRTFFDSQGFLEVDTP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  +  + F T     + + +  YL+ + E   KKLL AG ++++     +RN 
Sbjct: 196 VLQPVLGGAS-AKPFITYY---NSLSQNFYLRIATELPLKKLLVAGFDRVYEIGKIFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y+A+ + E++M    N+ R   E  N    +F   N       + 
Sbjct: 252 GFDSTHNPEFTSIEFYQAYANLEKIMDQTENLFRFLFEKLNLDPANFDFSN-------KK 304

Query: 168 ITVAEAFARYANIDLGTTLDNPDQ--PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           I   E FARY  I++ + L N D    +   L  +A++ G+++        + ++   + 
Sbjct: 305 INFLEKFARYDMIEITSKLMNFDLKSANFADLVEKAKKEGVKIEPFFKKGHLINKFFEKF 364

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  +P   S LA   P +P FT R EL+ C  E  N  DEL DPI+Q 
Sbjct: 365 VEPT--LINPTFIIGHPIEISPLAKSNPNNPNFTLRAELFICGKEFANMFDELNDPIDQL 422

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK +   E   ID +F+  L   MP + G  +G DRL ML+T   +I EVI 
Sbjct: 423 SRFQAQIIEKNQGNQEASEIDNEFVQALEYGMPPAGGCGIGIDRLTMLLTKNESIREVIL 482

Query: 345 TPFSQSNQE 353
            P  +  ++
Sbjct: 483 FPQLKPKKD 491


>gi|150021256|ref|YP_001306610.1| lysyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166230598|sp|A6LMS4|SYK_THEM4 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|149793777|gb|ABR31225.1| lysyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 502

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 90/364 (24%), Positives = 157/364 (43%), Gaps = 30/364 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R  +   +R++     FIE+++ 
Sbjct: 137 LRPMPEKWHGIKDKEVLYRQRYVDMIANDDTLNRFKVRFEVIKLIRDFLNSKGFIEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L+Y  G  +  R F T L   +     +Y++ + E   K+ +  G EK++     +RN 
Sbjct: 197 ILEYVTGGAS-ARPFVTHL---NVFDIEMYMRIATELYLKRFIVGGFEKVYELGKNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  YE +M     +     E         +QNV  +      
Sbjct: 253 GLSYKHHPEFTSIEIYQAYADYEDMMNLTEELFVYIVEKLFGTTKIKYQNVELDFSRPWR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +    +  +D+              +    ++ G+ V   D    +  ++    +
Sbjct: 313 RIKMRDFIKEHLGVDILEDSMGR-------MMDVLEEHGVEVEIRD-KGHMIEKLWD-LV 363

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +P   S LA  +  DPR T+RFEL     E+ NA  EL DP++Q  
Sbjct: 364 EDK--VVQPTFLLEHPVEISPLAKKHREDPRVTERFELIIYGREMANAFSELNDPVDQYE 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF K+++ ++    E   +D DF+  L   MP + G+ +G DRLVML+T +  I +VI  
Sbjct: 422 RFLKQVELREAGDEEAQMMDRDFVRALEYGMPPTGGLGIGIDRLVMLLTNSATIRDVIAF 481

Query: 346 PFSQ 349
           P  +
Sbjct: 482 PLVR 485


>gi|295102174|emb|CBK99719.1| Lysyl-tRNA synthetase (class II) [Faecalibacterium prausnitzii
           L2-6]
          Length = 503

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 159/368 (43%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              +KR+ I   +R Y  E  F+E+D+ 
Sbjct: 148 LRPLPEKFHGLTDTEMRYRQRYVDLIANPEVKETFVKRSKILKEIRAYLDEKGFLEVDTP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L       +  R F T     + +   + L+   E   K+L+  G ++++     +RN 
Sbjct: 208 ILTPFEIGAS-ARPFYTH---HNTLNMDMVLRIETELYLKRLIVGGMDRVYEVGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A   +  +M     + +  A+     +              E 
Sbjct: 264 GMDPKHNPEFTTIELYQAFTDFHGMMDLVEELYKRLAQKICGSLVIPYQGKQIDMGHWER 323

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +T+ EA  +Y+ +D      + D          A++  + +    T   I +      +E
Sbjct: 324 LTMIEAVKKYSGVDFNDWKTDED------AIAAAKEHHVELPEVPTKGAILAEFFDAFVE 377

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA   P DP FT+RFE +    E  NA  EL DPI+Q+ R
Sbjct: 378 DK--LIQPTFIYDYPVEISPLAKRKPDDPAFTERFEYFIDCTEYGNAFSELNDPIDQKGR 435

Query: 288 FEKEMQEKKKIY-NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE+++ E+K I  +    +D D++  L   +P + G+  G DRLVML+T + +I +V+  
Sbjct: 436 FERQVAERKAIEPDCKAQVDYDYVNALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLF 495

Query: 346 PFSQSNQE 353
           P  +  ++
Sbjct: 496 PTMKPIEQ 503


>gi|323305592|gb|EGA59333.1| Krs1p [Saccharomyces cerevisiae FostersB]
          Length = 437

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 150/374 (40%), Gaps = 30/374 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I   +R +  + +FIE+++ 
Sbjct: 59  LHMLPADHFGFKDQETRYRKRYLDLIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETP 118

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 119 MMNVIAGGAT-AKPFITH---HNDLDMDMYMRIAPELFLKQLVVGGLDRVYEIGRQFRNE 174

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------N 158
                H PEFT  E+Y+A+     LM     +     +          +           
Sbjct: 175 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGSYIIKYHPDPADPAKELE 234

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     + I + E   +  N+   +            L        +      T + + 
Sbjct: 235 LNFSRPWKRINMIEELEKVFNVKFPSGDQLHTAETGEFLKKVLVDNKLECPPPLTNARML 294

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 295 DKLVG---ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTEL 351

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE++ ++K +  +E   +DE F   L   +P + G   G DRL M +T +N
Sbjct: 352 NDPFDQRARFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSN 411

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  + +
Sbjct: 412 TIREVLLFPTLKPD 425


>gi|312601164|gb|ADQ90419.1| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 488

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 109/369 (29%), Positives = 175/369 (47%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P Q +   N D  YR+R                R+ I S +R +F    F+E+D+ 
Sbjct: 133 LHPLPDQYYGIENPDEKYRKRYLDLLVNSESAKTFRLRSKIISLIRTFFDSQGFLEVDTP 192

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  +  + F T     + + +  YL+ + E   KKLL AG ++++     +RN 
Sbjct: 193 VLQPVLGGAS-AKPFITYY---NSLSQNFYLRIATELPLKKLLVAGFDRVYEIGKIFRNE 248

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y+A+ + E++M    N+ R   E  N    +F   N       + 
Sbjct: 249 GFDSTHNPEFTSIEFYQAYANLEKIMDQTENLFRFLFEKLNLDPANFDFSN-------KK 301

Query: 168 ITVAEAFARYANIDLGTTLDNPDQ--PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           I   E FARY  I++ + L N D    +   L  +A++ G+++        + ++   + 
Sbjct: 302 INFLEKFARYDMIEITSKLMNFDLKSANFADLVEKAKKEGVKIEPFFKKGHLINKFFEKF 361

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  +P   S LA   P +P FT R EL+ C  E  N  DEL DPI+Q 
Sbjct: 362 VEPT--LINPTFIIGHPIEISPLAKSNPNNPNFTLRAELFICGKEFANMFDELNDPIDQL 419

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK +   E   ID +F+  L   MP + G  +G DRL ML+T   +I EVI 
Sbjct: 420 SRFQAQIIEKNQGNQEASEIDNEFVQALEYGMPPAGGCGIGIDRLTMLLTKNESIREVIL 479

Query: 345 TPFSQSNQE 353
            P  +  ++
Sbjct: 480 FPQLKPKKD 488


>gi|209523130|ref|ZP_03271686.1| lysyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496281|gb|EDZ96580.1| lysyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 522

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 94/376 (25%), Positives = 161/376 (42%), Gaps = 31/376 (8%)

Query: 3   QIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
             P   +   + +   R R                R+ I  S+R Y     F EI++  L
Sbjct: 152 PFPDSYYGINDPELCRRHREIDLVSNSTSLQRFKLRSRIIRSIRTYLWNAGFDEIETPVL 211

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G     R F T     + +   LYL+ + E   K+ +  G EK+F     +RN   
Sbjct: 212 QTIYGGAA-ARPFITH---HNALDIDLYLRIATELFLKRAVCGGMEKVFEIGRVFRNEGI 267

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA--NQKIFSFQNVNCNPFSEPEY 167
              H PEFT +E Y+A+  Y Q+M    ++I   A           +Q    +   + +Y
Sbjct: 268 DSTHNPEFTSIEVYQAYADYFQIMALVEDLICAVATEVLGGSTQIDYQGDKISIDRQYDY 327

Query: 168 ITVA-----EAFARYANID--LGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIF 218
             +      + +     ++     T  + D  +      +A+  G+R+          + 
Sbjct: 328 SNIYPTFTGKHWRVKTMVEAVRDETGLDFDTLEFSEAKSKAEAIGVRLTDLNTQNLGYLL 387

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             +  +K+E    +   T +  +P   S LA  + + P F +RFEL+    E  N   EL
Sbjct: 388 YAVFDQKVEST--LIEPTFIIDFPVEVSPLAKRHRSKPGFVERFELFIHGTEYSNGFSEL 445

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP++QR RFE+++ +K+   +E +P+DEDF+  L+  MP   G+ +G DRLVM +T   
Sbjct: 446 NDPVDQRQRFEEQLAQKQAGDDEAHPMDEDFIQALSLGMPNCGGMGIGVDRLVMFLTDTQ 505

Query: 338 NINEVIWTPFSQSNQE 353
           +I + I  P  +S ++
Sbjct: 506 SIRDAILFPTMRSFKD 521


>gi|166229887|sp|Q4A8F8|SYK_MYCH7 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|144575320|gb|AAZ53581.2| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 491

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 108/369 (29%), Positives = 174/369 (47%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P Q +   N D  YR+R                R+ I S +R +F    F+E+D+ 
Sbjct: 136 LHPLPDQYYGIENPDEKYRKRYLDLLVNSESAKTFRLRSKIISLIRTFFDSQGFLEVDTP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  + F T     + + +  YL+ + E   KKLL AG ++++     +RN 
Sbjct: 196 VLHPVLGGAS-AKPFITYY---NSLSQNFYLRIATELPLKKLLVAGFDRVYEIGKIFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y+A+ + E++M    N+ R   E  N    +F   N       + 
Sbjct: 252 GFDSTHNPEFTSIEFYQAYANLEKIMDQTENLFRFLFEKLNLDPANFDFSN-------KK 304

Query: 168 ITVAEAFARYANIDLGTTLDNPDQ--PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           I   E FARY  I++ + L N D    +   L  +A++ G+++        + ++   + 
Sbjct: 305 INFLEKFARYDMIEITSKLMNFDLKSANFADLVEKAKKEGVKIEPFFKKGHLINKFFEKF 364

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  +P   S LA   P +P FT R EL+ C  E  N  DEL DPI+Q 
Sbjct: 365 VEPT--LINPTFIIGHPIEISPLAKSNPNNPNFTLRAELFICGKEFANMFDELNDPIDQL 422

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK +   E   ID +F+  L   MP + G  +G DRL ML+T   +I EVI 
Sbjct: 423 SRFQAQIIEKNQGNQEASEIDNEFVQALEYGMPPAGGCGIGIDRLTMLLTKNESIREVIL 482

Query: 345 TPFSQSNQE 353
            P  +  ++
Sbjct: 483 FPQLKPKKD 491


>gi|71893559|ref|YP_279005.1| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 489

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 109/369 (29%), Positives = 175/369 (47%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P Q +   N D  YR+R                R+ I S +R +F    F+E+D+ 
Sbjct: 134 LHPLPDQYYGIENPDEKYRKRYLDLLVNSESAKTFRLRSKIISLIRTFFDSQGFLEVDTP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  +  + F T     + + +  YL+ + E   KKLL AG ++++     +RN 
Sbjct: 194 VLQPVLGGAS-AKPFITYY---NSLSQNFYLRIATELPLKKLLVAGFDRVYEIGKIFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y+A+ + E++M    N+ R   E  N    +F   N       + 
Sbjct: 250 GFDSTHNPEFTSIEFYQAYANLEKIMDQTENLFRFLFEKLNLDPANFDFSN-------KK 302

Query: 168 ITVAEAFARYANIDLGTTLDNPDQ--PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           I   E FARY  I++ + L N D    +   L  +A++ G+++        + ++   + 
Sbjct: 303 INFLEKFARYDMIEITSKLMNFDLKSANFADLVEKAKKEGVKIEPFFKKGHLINKFFEKF 362

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  +P   S LA   P +P FT R EL+ C  E  N  DEL DPI+Q 
Sbjct: 363 VEPT--LINPTFIIGHPIEISPLAKSNPNNPNFTLRAELFICGKEFANMFDELNDPIDQL 420

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK +   E   ID +F+  L   MP + G  +G DRL ML+T   +I EVI 
Sbjct: 421 SRFQAQIIEKNQGNQEASEIDNEFVQALEYGMPPAGGCGIGIDRLTMLLTKNESIREVIL 480

Query: 345 TPFSQSNQE 353
            P  +  ++
Sbjct: 481 FPQLKPKKD 489


>gi|15674679|ref|NP_268853.1| lysyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71910308|ref|YP_281858.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|39932234|sp|Q9A0V7|SYK_STRP1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|13621797|gb|AAK33574.1| putative lysyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71853090|gb|AAZ51113.1| lysyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 497

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 149/366 (40%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFVTH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II+ AA+         +Q          +
Sbjct: 260 GMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVRGDGPIDYQGTEIRINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A       D    +   +          A++  + +         I +    E 
Sbjct: 320 RVHMVDAIKEVTGADFWPEMTVEE------AIALAKEKQVPLEKHFISVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + Q K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 432 SRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 491

Query: 345 TPFSQS 350
            P  + 
Sbjct: 492 FPTMKP 497


>gi|196003370|ref|XP_002111552.1| hypothetical protein TRIADDRAFT_50208 [Trichoplax adhaerens]
 gi|190585451|gb|EDV25519.1| hypothetical protein TRIADDRAFT_50208 [Trichoplax adhaerens]
          Length = 547

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 84/362 (23%), Positives = 150/362 (41%), Gaps = 28/362 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R  I   +R YF+   F+E+++ 
Sbjct: 174 LHMMPHLHFGVKDKETRFRQRYLDLMINSVSCSKFVTRAKIIEYIRRYFMNLGFLEVETP 233

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+L+ +PE   K+L+  G  ++F     +RN 
Sbjct: 234 MMNAIAGGAT-AKPFITH---HNDLNMDLFLRIAPELYLKELVVGGLHRVFEIGKNFRNE 289

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PE+T  E+Y A   Y  LM     ++    +          +           
Sbjct: 290 GIDLTHNPEYTSCEFYMAFADYTDLMSITEQLLHGMVKSVRGSHQIEYHPDGPEGETWTV 349

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       + + E       +      +   +  R  L     + G+      T + +  
Sbjct: 350 DFTPPFRRVNMIEELENVLKVKFPAATELHTEETRQFLSDLCDKQGVECNPPRTTARLLD 409

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S L+  + + P  T+RFEL+ C  E+ NA  EL 
Sbjct: 410 KLVGEYIESQC--INPTYIVGHPEIMSPLSKWHRSCPGLTERFELFMCKKEIVNAYTELN 467

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DPI QR RF  + ++K    +E   +DE+F   L   +P ++G  MG DR+VM +T +NN
Sbjct: 468 DPIVQRERFMMQAKDKAAGDDEAQLVDENFCTALEYGLPPTAGWGMGIDRVVMFLTDSNN 527

Query: 339 IN 340
           I 
Sbjct: 528 IK 529


>gi|50311751|ref|XP_455904.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49645040|emb|CAG98612.1| KLLA0F18392p [Kluyveromyces lactis]
          Length = 588

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 83/374 (22%), Positives = 148/374 (39%), Gaps = 30/374 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I S +R++     FIE+++ 
Sbjct: 215 LHMLPTDHFGFKDQELRYRKRYLDLIMNKDARNRFITRSKIISYVRKFLDTRNFIEVETP 274

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 275 MMNVIAGGAT-AKPFVTH---HNDLDMDMYMRIAPELFLKELVVGGMDRVYEIGRQFRNE 330

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------N 158
                H PEFT  E+Y+A+     LM     +I    +          +           
Sbjct: 331 GIDMTHNPEFTTCEFYQAYADVYDLMDMTEIMISEMVKEITGSYVIKYHPDPNDETKELE 390

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     + I + E      ++                L    +   +  A   T + + 
Sbjct: 391 LNFTRPWKRINMIEELENRFHVTFPAGDQLHTAETGEFLKKVLKDNKMDCAPPLTNARML 450

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 451 DKLVG---ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTEL 507

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE++  +K +  +E   +DE F   L   +P + G   G DRL M +  +N
Sbjct: 508 NDPFDQRARFEEQANQKAQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLADSN 567

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  +  
Sbjct: 568 TIREVLLFPTLKPE 581


>gi|72080546|ref|YP_287604.1| lysyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 489

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 108/369 (29%), Positives = 174/369 (47%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P Q +   N D  YR+R                R+ I S +R +F    F+E+D+ 
Sbjct: 134 LHPLPDQYYGIENPDEKYRKRYLDLLVNSESAKTFRLRSKIISLIRTFFDSQGFLEVDTP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  + F T     + + +  YL+ + E   KKLL AG ++++     +RN 
Sbjct: 194 VLHPVLGGAS-AKPFITYY---NSLSQNFYLRIATELPLKKLLVAGFDRVYEIGKIFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y+A+ + E++M    N+ R   E  N    +F   N       + 
Sbjct: 250 GFDSTHNPEFTSIEFYQAYANLEKIMDQTENLFRFLFEKLNLDPANFDFSN-------KK 302

Query: 168 ITVAEAFARYANIDLGTTLDNPDQ--PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           I   E FARY  I++ + L N D    +   L  +A++ G+++        + ++   + 
Sbjct: 303 INFLEKFARYDMIEITSKLMNFDLKSANFADLVEKAKKEGVKIEPFFKKGHLINKFFEKF 362

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  +P   S LA   P +P FT R EL+ C  E  N  DEL DPI+Q 
Sbjct: 363 VEPT--LINPTFIIGHPIEISPLAKSNPNNPNFTLRAELFICGKEFANMFDELNDPIDQL 420

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF+ ++ EK +   E   ID +F+  L   MP + G  +G DRL ML+T   +I EVI 
Sbjct: 421 SRFQAQIIEKNQGNQEASEIDNEFVQALEYGMPPAGGCGIGIDRLTMLLTKNESIREVIL 480

Query: 345 TPFSQSNQE 353
            P  +  ++
Sbjct: 481 FPQLKPKKD 489


>gi|323355807|gb|EGA87621.1| Krs1p [Saccharomyces cerevisiae VL3]
          Length = 437

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 150/374 (40%), Gaps = 30/374 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I   +R +  + +FIE+++ 
Sbjct: 59  LHMLPADHFGFKDQETRYRKRYLDLIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETP 118

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 119 MMNVIAGGAT-AKPFITH---HNDLDMDMYMRIAPELFLKQLVVGGLDRVYEIGRQFRNE 174

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------N 158
                H PEFT  E+Y+A+     LM     +     +          +           
Sbjct: 175 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGSYIIKYHPDPADPAKELE 234

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     + I + E   +  N+   +            L        +      T + + 
Sbjct: 235 LNFSRPWKRINMIEELEKVFNVKFPSGDQLHTAETGEFLKKXLVDNKLECPPPLTNARML 294

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 295 DKLVG---ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTEL 351

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE++ ++K +  +E   +DE F   L   +P + G   G DRL M +T +N
Sbjct: 352 NDPFDQRARFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSN 411

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  + +
Sbjct: 412 TIREVLLFPTLKPD 425


>gi|317051523|ref|YP_004112639.1| lysyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946607|gb|ADU66083.1| lysyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 498

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 164/365 (44%), Gaps = 28/365 (7%)

Query: 2   HQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +    +D    YR+R              L R  I   +R+YF    ++E+++  
Sbjct: 145 RPLPEKWHGLKDRETCYRQRYVDLMVNEESRERFLMRGRIVKFIRDYFTARDYLEVETPM 204

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     + F T     + +   LYL+ +PE   K+L+  G +++F     +RN  
Sbjct: 205 MHPLLGGAA-AKPFVTH---HNTLDMDLYLRIAPELYLKRLVVGGFDRVFEINRNFRNEG 260

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPEY 167
               H PEFTM+EWY+A+ +Y  LM    +++   A ++      ++        +    
Sbjct: 261 ISPKHNPEFTMIEWYQAYATYHDLMDLTEDMLCTMARQLLGSDTITYGEHQIRLQAPFPR 320

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +T+ +A  +Y+++         +  D   L    ++ G+      +   I   +  E +E
Sbjct: 321 LTIRQALLQYSHL------TEAELEDVQSLQRLLKELGVD-GEHMSHERILFALFEELVE 373

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA  +  +P  T+RFEL+    ELCN   EL DP++Q  R
Sbjct: 374 SK--LIQPTFIVDFPKEISPLAKSHQDNPDITERFELFVAGWELCNGFTELNDPVDQYER 431

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F K+++ K+    E   +D D++  L   +P ++G  MG DRLVML+T A  I +VI  P
Sbjct: 432 FLKQVEAKQSGDEEATDMDLDYIRALEYGLPPTAGEGMGIDRLVMLMTNAQTIRDVILFP 491

Query: 347 FSQSN 351
             +  
Sbjct: 492 HMRPE 496


>gi|159898199|ref|YP_001544446.1| lysyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|238687095|sp|A9B5T5|SYK_HERA2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|159891238|gb|ABX04318.1| lysyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 492

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 169/370 (45%), Gaps = 28/370 (7%)

Query: 1   MHQIPSQPWW---NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDS 46
           +   P +      +++   R+R                R  + +++R Y  E  F+E+++
Sbjct: 135 ITPPPDKREGQFSDQEARQRQRYVDLSANPEVREIFRIRARLITAMRRYLDERGFLEVET 194

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             LQ   G     R F+T     + + + LYL+ + E   K+L+  G + ++     +RN
Sbjct: 195 PVLQGIYGGAA-ARPFTTH---HNQLHQDLYLRIATELYLKRLIVGGFDGVYEIGKNFRN 250

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y+A+  YE +M+    +IR AA ++ N     +Q          
Sbjct: 251 EGVDRTHNPEFTMIEVYQAYGDYESIMQLTEGMIRFAAEQIFNSTSIEYQGHQIELGGSW 310

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + +T+ +A      +D+          +   L+    +AG+++    TW+     +  E 
Sbjct: 311 QRLTMRDAIFEKTGVDIRECR------EFDTLWEAIGEAGLKIERKPTWAKQVDELFSEF 364

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP P S LA     DP+F +RFEL+    E+ NA  EL DP +Q 
Sbjct: 365 VEPE--LIQPTFITEYPQPLSPLAKRKADDPQFVERFELFMLGAEIANAFSELNDPFDQE 422

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF ++ ++     +E   +DED+L  L   MP + G+ +G DRL +L T    I EVI+
Sbjct: 423 QRFLEQGRDYAAGDDEAMQMDEDYLEALKVGMPPTGGLGIGIDRLCLLFTNQTTIREVIF 482

Query: 345 TPFSQSNQEE 354
            P  +   EE
Sbjct: 483 FPHLRKQGEE 492


>gi|281210408|gb|EFA84574.1| leucyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 594

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 166/371 (44%), Gaps = 26/371 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRRPF------------LLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  IP +   N++  YR+R               + R+ + S LR Y VE  F+E+D+  
Sbjct: 227 LRPIPLR-LMNKEVRYRKRHLDFLVNGSQIRNAFIIRSRMISFLRNYLVERGFLEVDTPI 285

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L  + G   + + F T     + +   ++L+ SPE   K+L+ +G +K+F     +RN  
Sbjct: 286 LSTNVGGA-NAKPFQT---YSNSLDLDMFLRISPELYLKQLVISGFDKVFEIGKQFRNEG 341

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF----SFQNVNCNPFSE 164
               H PEFT  E Y+A+  Y  +++   +++      A         S  ++  +    
Sbjct: 342 IDLTHNPEFTTCELYQAYGDYNTMIRLTEDLLSKMVYDAVGSYKIPLPSNNDITIDFTPP 401

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
              I        +    L + L + D      L    ++ G+  +   T + +   +   
Sbjct: 402 FNKIHFIPKIEEFIGKKLPSDLVSYDCIPE--LIKICKENGVNYSAPFTPTRLLDSLASH 459

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +EP       T +  +P   S LA ++  +P+FT+RFEL+    EL NA  EL DP++Q
Sbjct: 460 FLEPLC--IQPTFIIDHPRAMSPLAKLHRDNPQFTERFELFVGGKELVNAYSELNDPVDQ 517

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RF  +  +++   +E   +DE +   +   +P + G  +G DRLVMLV+   +I +VI
Sbjct: 518 RSRFMAQSNDRQTGDDEAQILDEGYCNAMEYGLPPTGGWGLGIDRLVMLVSNNVSIKDVI 577

Query: 344 WTPFSQSNQEE 354
             P  +   E+
Sbjct: 578 MFPTMKPQFEK 588


>gi|168058919|ref|XP_001781453.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667090|gb|EDQ53728.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 589

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 91/391 (23%), Positives = 160/391 (40%), Gaps = 46/391 (11%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R  I S +R +     ++EI++ 
Sbjct: 205 LLPLPDKWHGLTDVEKRYRQRYVDMIMNPDVATVFRDRAKIISEIRRHMESLGYLEIETP 264

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + + + +YL+ + E   K+++  G E+++     +RN 
Sbjct: 265 VLQGEAGGA-DARPFVTH---HNALGQDMYLRIATELHLKRMVVGGFERVYEIGRIFRNE 320

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y+ +M     I+   A         ++Q    +     +
Sbjct: 321 GISTRHNPEFTSIELYQAYADYDDMMNLAEEIVEKCALTVNGSLSLTYQGTEISLQRPWK 380

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR----VAHDDTWSDIFSRIL 222
             ++         I+  +  D+ +      +   A          +    +   + + + 
Sbjct: 381 RASMHSLVEEVTGINFASFGDDIEAAKNAAVSFFAGHIERHDTGTILKAPSIGHLVNEVF 440

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +E    +   T +  +P   S LA  + + P   +RFEL+    E+ NA  EL DPI
Sbjct: 441 EMVVEKT--LIQPTFVMDHPVEISPLAKPHRSKPGLVERFELFVYGREMANAFSELTDPI 498

Query: 283 EQRHRFEKEMQ------------EKKKIY-------NETYP--IDEDFLACLT-EMPQSS 320
           EQR RFE +++             K K         N+ Y   +DEDF+  L   MP ++
Sbjct: 499 EQRSRFEAQVRTHNAAMAAAAEAAKAKGDTALTSAINDAYEVGMDEDFVTALEYGMPPTA 558

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           G+ +G DRLVML+T + +I +VI  P  +S 
Sbjct: 559 GMGIGIDRLVMLLTDSASIRDVIAFPVMKSQ 589


>gi|45201132|ref|NP_986702.1| AGR037Cp [Ashbya gossypii ATCC 10895]
 gi|44985915|gb|AAS54526.1| AGR037Cp [Ashbya gossypii ATCC 10895]
          Length = 589

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 83/374 (22%), Positives = 150/374 (40%), Gaps = 30/374 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I + +R++     FIE+++ 
Sbjct: 213 LHMLPADHFGFKDQETRYRKRYLDLIMNKDARGRFITRSKIITYIRKFLDNRDFIEVETP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 273 MMNVIAGGAT-AKPFVTH---HNDLDMQMYMRIAPELFLKQLVVGGMDRVYEIGRQFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y+A+     LM     +     +          +          +
Sbjct: 329 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELLFSEMVKEITGDYKIKFHPDPNDPSKEYD 388

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     + I + E   +  N+                L        +      T + + 
Sbjct: 389 INFARPWKRINMIEELEKRFNVTFPAGDQLHTAETGEFLKKILSDNKMDCPPPLTNARML 448

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 449 DKLVG---ELEDTCIDPTFIFGHPQMMSPLAKHSRDQPGLCERFEVFVATKEICNAYTEL 505

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE++ ++K +  +E   IDE F   L   +P + G   G DRL M +T +N
Sbjct: 506 NDPFDQRARFEEQARQKDQGDDEAQLIDETFCNALEYGLPPTGGWGCGVDRLAMFLTDSN 565

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  + +
Sbjct: 566 TIREVLLFPTLKPD 579


>gi|195130335|ref|XP_002009607.1| GI15452 [Drosophila mojavensis]
 gi|193908057|gb|EDW06924.1| GI15452 [Drosophila mojavensis]
          Length = 554

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 79/362 (21%), Positives = 149/362 (41%), Gaps = 28/362 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R                R  I S +R++     F+EI++ 
Sbjct: 195 LHMLPHLHFGLKDKETRYRQRYLDLILNNKVRENFQIRAKIISYVRQFLDRLGFLEIETP 254

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + ++  L+++ +PE   K ++  G ++++     +RN 
Sbjct: 255 MMNMIAGGAT-AKPFVTH---HNELKMDLFMRIAPELYHKMVVVGGLDRVYEIGRQFRNE 310

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  L++    ++       +       +           
Sbjct: 311 GIDLTHNPEFTTCEFYMAYADYYDLIEITEQMLSGMVMAIHGSYKIKYHPDGPEGVEQEI 370

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++ +       +   +            L     +  +      T + +  
Sbjct: 371 DFTPPFKRVSMIKTLEEKLQVKFPSADTFNSPAANEFLSQLCAKHQVECPPPRTTARLLD 430

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E IE        T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL 
Sbjct: 431 KLVGEFIEETC--INPTFICEHPQIMSPLAKYHRSVPGLTERFELFVAKKEVCNAYTELN 488

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++  +K    +E   +DE+F   L   +P + G  MG DRL M +T +N 
Sbjct: 489 DPVVQRERFEQQAGDKAAGDDEAQMVDENFCTALEYGLPPTGGWGMGIDRLAMFLTDSNT 548

Query: 339 IN 340
           I 
Sbjct: 549 IK 550


>gi|291534724|emb|CBL07836.1| Lysyl-tRNA synthetase (class II) [Roseburia intestinalis M50/1]
          Length = 645

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R +  +  F+E+++ 
Sbjct: 140 LQILPEKFHGLTDTDMRYRQRYIDLIMNQESKEVFIKRSKILKEIRNFLADRDFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 200 MLVSNAGGAA-ARPFETHY---NALNEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+   ++ R  A +V      S+  +  +      
Sbjct: 256 GVDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGSTKISYNGIEIDLGKPFT 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y  ID  T  D+             ++  I         DI +    E  
Sbjct: 316 RMTMNDAIKKYTGIDFDTVADDAAAKKLA------EEHHIAYEERHKKGDIINLFFEEFC 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P+DP   +RFEL+    E+CNA  EL DP++QR 
Sbjct: 370 EKE--LIQPTFIMDHPIEISPLTKKKPSDPTKVERFELFINTWEMCNAYSELNDPVDQRE 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +        +E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 428 RFAAQDANAAAGDDEAEHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDSAAIRDVLLF 487

Query: 346 PFSQS 350
           P  +S
Sbjct: 488 PTMKS 492


>gi|67623847|ref|XP_668206.1| Kars protein [Cryptosporidium hominis TU502]
 gi|54659397|gb|EAL37975.1| Kars protein [Cryptosporidium hominis]
          Length = 532

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 155/374 (41%), Gaps = 30/374 (8%)

Query: 2   HQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P+     +D    YR+R                R+     +R YF    F+E+++  
Sbjct: 156 HMLPTAISGLKDQEVRYRQRYLDLMLNEESRKVFKLRSRAIKYIRNYFDRLGFLEVETPM 215

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L    G     R F T     + +   LY++ +PE   K+L+  G +K++     +RN  
Sbjct: 216 LNMIYGGAA-ARPFIT---YHNELETQLYMRIAPELYLKQLIVGGLDKVYEIGKNFRNEG 271

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ--------KIFSFQNVNCN 160
               H PEFT +E+Y A+  Y  LM     +I       +              + +  +
Sbjct: 272 IDLTHNPEFTAMEFYMAYADYYDLMDLTEELISGLVLEIHGSLKIPYHPDGPEGKCIEID 331

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +  +  +  E         L   LD+ +  D   +    ++  I + H  T + +  +
Sbjct: 332 FTTPWKRFSFVEEIESGLGEKLKRPLDSQENID--FMVEMCEKHKIELPHPRTAAKLLDK 389

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +    +E        + +  +P   S LA  +   P  T+RFEL+    ELCNA  EL +
Sbjct: 390 LAGHFVETKC--TNPSFIIDHPQTMSPLAKWHREKPEMTERFELFVLGKELCNAYTELNE 447

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P++QR  FE++   K     E  PIDE F   L   +P + G  +G DRL+M +   NNI
Sbjct: 448 PLQQRKFFEQQADAKASGDVEACPIDETFCLALEHGLPPTGGWGLGIDRLIMFLADKNNI 507

Query: 340 NEVIWTPFSQSNQE 353
            EVI  P  ++ ++
Sbjct: 508 KEVILFPAMRNIKQ 521


>gi|257440518|ref|ZP_05616273.1| lysine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257197022|gb|EEU95306.1| lysine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 503

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 159/368 (43%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              +KR+ I   +R Y  E  F+E+D+ 
Sbjct: 148 LRPLPEKFHGLTDTEMRYRQRYVDLIANPEVKDTFVKRSQILKEIRAYLDEKGFLEVDTP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L       +  R F T     + +   + L+   E   K+L+  G ++++     +RN 
Sbjct: 208 ILTPFEIGAS-ARPFYTH---HNSLNMDMVLRIETELYLKRLIVGGMDRVYEVGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A   +  +M     + +  A      +           S  E 
Sbjct: 264 GMDPKHNPEFTSIELYQAFTDFHGMMDLVEELYKRLALKICGSMVIPYQGKQIDMSHWER 323

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +T+ EA  +Y+ +D      + D          A++  + +    T   I +      +E
Sbjct: 324 LTMVEAVKKYSGVDFNDWKSDED------AIASAKEHHVELPEVPTKGAILAEFFDAFVE 377

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA   P DP FT+RFE +    E  NA  EL DPI+Q+ R
Sbjct: 378 DK--LIQPTFIYDYPVEISPLAKRKPDDPAFTERFEYFIDCTEYGNAFSELNDPIDQKGR 435

Query: 288 FEKEMQEKKKIY-NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE+++ E+K I  +    +D D++  L   +P + G+  G DRLVML+T + +I +V+  
Sbjct: 436 FERQVAERKAIEPDCKAQVDYDYVNALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLF 495

Query: 346 PFSQSNQE 353
           P  +  ++
Sbjct: 496 PTMKPIEQ 503


>gi|254582983|ref|XP_002499223.1| ZYRO0E06908p [Zygosaccharomyces rouxii]
 gi|238942797|emb|CAR30968.1| ZYRO0E06908p [Zygosaccharomyces rouxii]
          Length = 594

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 148/374 (39%), Gaps = 30/374 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I S +R +     FIE+++ 
Sbjct: 213 LHMLPADHFGFKDQETRYRKRYLDLIMNKGSRDRFITRSKIISFIRRFLDSKNFIEVETP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G E+++     +RN 
Sbjct: 273 MMNVIAGGAT-AKPFVTH---HNDLDMDMYMRIAPELFLKELVVGGMERVYEIGRQFRNE 328

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN------- 160
                H PEFT  E+Y+A      LM     +     +          + + +       
Sbjct: 329 GIDMTHNPEFTTCEFYQAFADVYDLMDMTELLFSEMVKEITGSYEIKYHPDPHNPEKEMS 388

Query: 161 --PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
                  + I + EA     N           +     L        +      T + + 
Sbjct: 389 LNFARPWKRIHMIEALEERFNTKFPAGDQLHTKETGEFLKNLLAANKMDCPPPLTNARML 448

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 449 DKLVG---ELEDTCINPTFIFGHPQMMSPLAKYSRDMPGLCERFEVFVATKEICNAYTEL 505

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP +QR RFE++ ++K +  +E   +DE F   L   +P + G   G DRL M +T +N
Sbjct: 506 NDPFDQRARFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGCGIDRLAMFLTDSN 565

Query: 338 NINEVIWTPFSQSN 351
            I EV+  P  + +
Sbjct: 566 TIREVLLFPTLKPD 579


>gi|240143458|ref|ZP_04742059.1| lysine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257204491|gb|EEV02776.1| lysine--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 645

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 161/365 (44%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R +  +  F+E+++ 
Sbjct: 140 LQILPEKFHGLTDTDMRYRQRYIDLIMNQESKEVFIKRSKILKEIRNFLADRDFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 200 MLVSNAGGAA-ARPFETHY---NALNEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+   ++ R  A +V      S+  +  +      
Sbjct: 256 GVDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGSTKISYNGIEIDLGKPFT 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y  ID  T  D+             ++  I         DI +    E  
Sbjct: 316 RMTMNDAIKKYTGIDFDTVADDAAAKKLA------EEHHIAYEERHKKGDIINLFFEEFC 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P+DP   +RFEL+    E+CNA  EL DP++QR 
Sbjct: 370 EKE--LIQPTFIMDHPIEISPLTKKKPSDPTKVERFELFINTWEMCNAYSELNDPVDQRE 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +        +E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 428 RFAAQDANAAAGDDEAEHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDSAAIRDVLLF 487

Query: 346 PFSQS 350
           P  +S
Sbjct: 488 PTMKS 492


>gi|291571166|dbj|BAI93438.1| lysyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 522

 Score =  309 bits (791), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 94/376 (25%), Positives = 161/376 (42%), Gaps = 31/376 (8%)

Query: 3   QIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
             P   +   + +   R R                R+ I  S+R Y     F EI++  L
Sbjct: 152 PFPDSYYGINDPELCRRHREIDLVSNSTSLQRFKLRSRIIRSIRTYLWNAGFDEIETPVL 211

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G     R F T     + +   LYL+ + E   K+ +  G EK+F     +RN   
Sbjct: 212 QTIYGGAA-ARPFITH---HNTLDIDLYLRIATELFLKRAVCGGMEKVFEIGRVFRNEGI 267

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA--NQKIFSFQNVNCNPFSEPEY 167
              H PEFT +E Y+A+  Y Q+M    ++I   A           +Q    +   + +Y
Sbjct: 268 DSTHNPEFTSIEVYQAYADYFQIMALVEDLICAVATEVLGGSTQIDYQGDKISIDRQYDY 327

Query: 168 ITVA-----EAFARYANID--LGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIF 218
             +      + +     ++     T  + D  +      +A+  G+R+          + 
Sbjct: 328 SNIYPTFTGKHWRVKTMVEAVRDETGLDFDTLEFSEAKSKAEAIGVRLTDLNTQNLGYLL 387

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             +  +K+E    +   T +  +P   S LA  + + P F +RFEL+    E  N   EL
Sbjct: 388 YAVFDQKVEST--LIEPTFIIDFPVEVSPLAKRHRSKPGFVERFELFIHGTEYSNGFSEL 445

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP++QR RFE+++ +K+   +E +P+DEDF+  L+  MP   G+ +G DRLVM +T   
Sbjct: 446 NDPVDQRQRFEEQLAQKQAGDDEAHPMDEDFIQALSLGMPNCGGMGIGVDRLVMFLTDTQ 505

Query: 338 NINEVIWTPFSQSNQE 353
           +I + I  P  +S ++
Sbjct: 506 SIRDAILFPTMRSFKD 521


>gi|293399907|ref|ZP_06644053.1| lysine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306307|gb|EFE47550.1| lysine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 493

 Score =  309 bits (791), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 86/367 (23%), Positives = 150/367 (40%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  +RRR   L            R  I  +++ Y      +E+++ 
Sbjct: 139 LRPLPEKFHGLQDKEERFRRRYVDLIMNEESKRIAVTRPRIIRAIQRYLDGKGLMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +  P YL+ + E   K+L+  G E ++     +RN 
Sbjct: 199 VLQPILGGAA-ARPFITH---HNTLDMPFYLRIATELPLKRLIVGGLEGVYEIGRLFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+     +M     +    A  V      ++     +  +  +
Sbjct: 255 GMDATHNPEFTTVEAYVAYSDLNGMMDLIEGLFDYVANEVLGTTEITYNEKAISLKAPFK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +              A++  I V         I +    + 
Sbjct: 315 RLHMVDAIKEACGVDFWKEMS------FEEACEIAKEHEIEVEKKHNSVGHIINLFFEKY 368

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     DPRF  R+EL+    E  NA  EL DPI+QR
Sbjct: 369 VEET--LIQPTYIYGHPTSISPLAKKNAQDPRFADRYELFIDGHEYANAFSELNDPIDQR 426

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +++ +    +E   +D D++  L   +P + G+ +G DR VML+TG   I EV+ 
Sbjct: 427 ERFENQLKLRDLGDDEANEMDTDYVEALEYGLPPTGGVGLGIDRFVMLLTGQTTIREVLL 486

Query: 345 TPFSQSN 351
            P  ++ 
Sbjct: 487 FPHMKNK 493


>gi|326384378|ref|ZP_08206059.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326196976|gb|EGD54169.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 1131

 Score =  309 bits (791), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 150/366 (40%), Gaps = 21/366 (5%)

Query: 1    MHQIPSQPWW--NRDFH-----------YRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     + +              R R  L+ R+ +  +LR++     F+E+++ 
Sbjct: 773  LHPLPDKWSGLTDPEARVRQRYVDLAVSARSRELLITRSAVVRALRDHLAAQGFLEVETP 832

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   +   F T +   +     LYL+ +PE   K+L   G EK+F     +RN 
Sbjct: 833  ILQQIHGGA-NATPFRTHI---NAYNLDLYLRIAPELYLKRLCVGGIEKVFEMGRNFRNE 888

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT LE Y AH  YE +M     +I  AA  AN +    +  +       + 
Sbjct: 889  GVDFSHNPEFTSLEAYAAHHDYESMMTLTREMIIAAAVAANGRAVIERTDDAGGVEVVDI 948

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                   + +A +          +     L    +  GI    D     +   +    +E
Sbjct: 949  SGEWPVKSVHAAVSEAAGAAVSPESSADELREICRGLGIAYRPDWDAGHLVLELYEHLVE 1008

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + +     +R++L A  +EL  A  EL DP+EQR R
Sbjct: 1009 DRTTF--PTFYKDFPTSTSPLTRGHRSIEGVAERWDLVAWGVELGTAYTELTDPVEQRKR 1066

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              ++        +E   IDEDFL  L   MP + G+ +G DR+VML+TG  +I E +  P
Sbjct: 1067 LTEQSILAAGGDSEAMEIDEDFLTALEYAMPPTGGLGLGVDRIVMLITGQ-SIRESLAFP 1125

Query: 347  FSQSNQ 352
             ++  Q
Sbjct: 1126 LAKPQQ 1131


>gi|123447017|ref|XP_001312254.1| lysyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
 gi|121894094|gb|EAX99324.1| lysyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
          Length = 605

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 84/376 (22%), Positives = 151/376 (40%), Gaps = 30/376 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           + Q+P     + +  YR+R                R  +   +R +  +  F E+++  +
Sbjct: 223 LFQMPKHKLEDLEVRYRQRFFDLIVNRENRQIFETRCKVVKMIRGFLDDLDFTEVETPIM 282

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             + G  T  + F T     + +   L+L+ +PE   K L+  G  +++     +RN   
Sbjct: 283 WKTAGGAT-AKPFITH---HNALDIDLWLRVAPELFLKMLVVGGMNRVYELGKQFRNEGI 338

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF----------SFQNVNC 159
              H PEFT  E+Y A+  Y  LM     + +         +           +      
Sbjct: 339 DLTHNPEFTSCEFYMAYADYNDLMDLTEKLYQKIVMEVKGTLKFSINVQKEDGTIGQQEI 398

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +  S  + I + E   +  N       D  +   R LL  + ++  + V    T + +  
Sbjct: 399 DFSSPWQRIDMIEELEKQINFKFPPLEDTDEV--RELLEKKCKELDVDVPPPMTVARMLD 456

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ + +EP       T +  +P   S LA  +   P   +RFE++   +E  NA  EL 
Sbjct: 457 KMVGKFVEPLCV--NPTFMCNHPQVMSPLAKWHRTKPGIVERFEVFINGLEYANAYTELN 514

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
            P+ QR  F  +++ K    +E  P D+ F   L   +P ++G   G DRLVML+T   +
Sbjct: 515 CPMVQRELFLDQLKAKAAKDDEAMPYDDTFCTALEYALPPTAGWGCGVDRLVMLLTNQVS 574

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +    E
Sbjct: 575 IREVLLFPLMKPAAGE 590


>gi|66357294|ref|XP_625825.1| lysyl-tRNA synthetase (NOB+tRNA synthetase) [Cryptosporidium parvum
           Iowa II]
 gi|46226895|gb|EAK87861.1| lysyl-tRNA synthetase (NOB+tRNA synthetase) [Cryptosporidium parvum
           Iowa II]
          Length = 559

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 155/374 (41%), Gaps = 30/374 (8%)

Query: 2   HQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P+     +D    YR+R                R+     +R YF    F+E+++  
Sbjct: 183 HMLPTAISGLKDQEVRYRQRYLDLMLNEESRKVFKLRSRAIKYIRNYFDRLGFLEVETPM 242

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L    G     R F T     + +   LY++ +PE   K+L+  G +K++     +RN  
Sbjct: 243 LNMIYGGAA-ARPFIT---YHNELETQLYMRIAPELYLKQLIVGGLDKVYEIGKNFRNEG 298

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ--------KIFSFQNVNCN 160
               H PEFT +E+Y A+  Y  LM     +I       +              + +  +
Sbjct: 299 IDLTHNPEFTAMEFYMAYADYYDLMDLTEELISGLVLEIHGSLKIPYHPDGPEGKCIEID 358

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +  +  +  E         L   LD+ +  D   +    ++  I + H  T + +  +
Sbjct: 359 FTTPWKRFSFVEEIESGLGEKLKRPLDSQENID--FMVEMCEKHEIELPHPRTAAKLLDK 416

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +    +E        + +  +P   S LA  +   P  T+RFEL+    ELCNA  EL +
Sbjct: 417 LAGHFVETKC--TNPSFIIDHPQTMSPLAKWHREKPEMTERFELFVLGKELCNAYTELNE 474

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P++QR  FE++   K     E  PIDE F   L   +P + G  +G DRL+M +   NNI
Sbjct: 475 PLQQRKFFEQQADAKASGDVEACPIDETFCLALEHGLPPTGGWGLGIDRLIMFLADKNNI 534

Query: 340 NEVIWTPFSQSNQE 353
            EVI  P  ++ ++
Sbjct: 535 KEVILFPAMRNVKQ 548


>gi|332523099|ref|ZP_08399351.1| lysine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314363|gb|EGJ27348.1| lysine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 496

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFNRFVTRSKIISEIRRYLDSKDFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  ++ +M     II+ AA+         +Q    +     +
Sbjct: 260 GMDATHNPEFTSIEVYEAYADFQDIMNLTEGIIQHAAKAVTGDGPIDYQGQMIHINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
            + + +A      ID    +   D          AQ+  + +  H  T   I +    E 
Sbjct: 320 RLHMVDAIKDVTGIDFWKEMSFDD------ARALAQEKHVPLETHFTTVGHIINAFFEEF 373

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 374 VEET--LIQPTFVYGHPVEVSPLAKKNAEDARFTDRFELFIVTKEYANAFTELNDPIDQL 431

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + Q K+    E   ID D++  L   MP + G+ +G DRL ML+T   +I +V+ 
Sbjct: 432 SRFEAQAQAKELGDIEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLLTNTTSIRDVLL 491

Query: 345 TPFSQ 349
            P  +
Sbjct: 492 FPTMK 496


>gi|15229833|ref|NP_187777.1| ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1); ATP binding
           / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic
           acid binding / nucleotide binding [Arabidopsis thaliana]
 gi|55583786|sp|Q9ZPI1|SYK_ARATH RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|6041823|gb|AAF02138.1|AC009918_10 lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|4325324|gb|AAD17333.1| lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|20466171|gb|AAM20403.1| lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|25083918|gb|AAN72134.1| lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332641565|gb|AEE75086.1| Lysyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 626

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 86/366 (23%), Positives = 154/366 (42%), Gaps = 28/366 (7%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R  I S +R +     F+E+++  +    G   
Sbjct: 256 LKDQESRYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLDNKNFLEVETPMMNMIAGGAA 315

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LY++ +PE   K+L+  G E+++     +RN      H PEF
Sbjct: 316 -ARPFVTH---HNDLDMRLYMRIAPELYLKQLIVGGLERVYEIGKQFRNEGIDLTHNPEF 371

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI--------FSFQNVNCNPFSEPEYIT 169
           T  E+Y A   Y  LM+    ++    +              +    +  +       I 
Sbjct: 372 TTCEFYMAFADYNDLMEMTEVMLSGMVKELTGGYKIKYNANGYDKDPIEIDFTPPFRRIE 431

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           +     + A +++   L + +      L     +  ++     T + +  +++ E +EP 
Sbjct: 432 MIGELEKVAKLNIPKDLASEEAN--KYLIDACARFDVKCPPPQTTARLLDKLVGEFLEPT 489

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 T +   P   S LA  + +    T+RFEL+    ELCNA  EL DP+ QR RF 
Sbjct: 490 CV--NPTFIINQPEIMSPLAKWHRSKSGLTERFELFINKHELCNAYTELNDPVVQRQRFA 547

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++++++   +E   +DE F   L   +  + G  +G DRL ML+T + NI EV++ P  
Sbjct: 548 DQLKDRQSGDDEAMALDETFCNALEYGLAPTGGWGLGIDRLSMLLTDSLNIKEVLFFPAM 607

Query: 349 QSNQEE 354
           +  QEE
Sbjct: 608 RPPQEE 613


>gi|323126879|gb|ADX24176.1| lysyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 500

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 151/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 148 LRPLPEKFHGLTDIETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 208 VLHNEAGGAA-ARPFVTH---HNAQNIDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     II+ AA+         +Q          +
Sbjct: 264 GMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINEPFK 323

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +A      +D    +   +          A++  + +    T    I +    E 
Sbjct: 324 RVHMVDAIKEVTGVDFWPEMTVEE------AIALAKEKQVPLEKHFTSVGHIINAFFEEF 377

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q 
Sbjct: 378 VEET--LVQPTFVFGHPVEVSPLAKKNPEDTRFTDRFELFIMTKEYANAFTELNDPIDQL 435

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE + Q K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+ 
Sbjct: 436 SRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTNTTTIRDVLL 495

Query: 345 TPFSQ 349
            P  +
Sbjct: 496 FPTMK 500


>gi|222152758|ref|YP_002561935.1| lysyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222113571|emb|CAR41394.1| lysyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 496

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 151/364 (41%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ + S +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGLTDIETIYRKRHLDLISNRDSFNRFVTRSKMISEIRRYLDGLNFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     +     + L+ + E   K+L+  G E+++     +RN 
Sbjct: 204 VLHNEAGGAA-ARPFITH---HNAQNMDMVLRIATELHLKRLIVGGMERVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  ++ +M     II+ AA+         +Q          +
Sbjct: 260 GMDATHNPEFTTIEVYQAYADFQDIMNLTEGIIQHAAKAVKGDGPIEYQGQVIKINEPFK 319

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + +A      +D        +      + L  ++      H  +   I +    E +
Sbjct: 320 RIHMVDAIKEVTGVDFWK-----EMTVEEAIQLAQEKHVPLEKHFTSVGHIINAFFEEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q  
Sbjct: 375 EET--LIQPTFVFGHPVEVSPLAKKNPEDNRFTDRFELFIVTKEYANAFTELNDPIDQLS 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + Q K+   +E   ID DF+  L   MP + G+ +G DRL ML+T    I +V+  
Sbjct: 433 RFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLF 492

Query: 346 PFSQ 349
           P  +
Sbjct: 493 PTMK 496


>gi|300707705|ref|XP_002996050.1| hypothetical protein NCER_100909 [Nosema ceranae BRL01]
 gi|263511622|sp|C4V8R9|SYKC_NOSCE RecName: Full=Probable lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|239605312|gb|EEQ82379.1| hypothetical protein NCER_100909 [Nosema ceranae BRL01]
          Length = 514

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 94/377 (24%), Positives = 161/377 (42%), Gaps = 31/377 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  IP+  +   + +  YR+R              ++R  I   +R+Y  +  F+E+++ 
Sbjct: 144 LRTIPTDYYGLKDPEIIYRKRYLDLLINKESKNRFIQRTNIIKFIRKYLDDKDFVEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   P      + F+T     + ++  L+L+ +PE   KKL+  G ++++     +RN 
Sbjct: 204 LLNIIPTGAA-AKPFTTH---HNELKMNLFLRIAPELYLKKLVIGGMDRVYEIGKLFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF----------SFQNV 157
                H PEFT  E+Y A+  Y  +M     ++    +  +                + V
Sbjct: 260 GIDLTHNPEFTACEFYMAYADYNDMMNMAEEMLNGMCKYLHGSEKIVYAPNKREKEVKPV 319

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             N         + E  ++   I L     N D+    LL     +  I+V    T + +
Sbjct: 320 EINFARPFARFHMLEELSKVVGIKLDGLNINSDET-LDLLIETCDKYEIKVEQPKTLTRV 378

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             +++   IEP       + +  YP   S LA  + ++    +RFEL+    E+CNA  E
Sbjct: 379 LDKLVGHFIEPKC--INPSFIIGYPLVTSPLAKNHRSEAGMVERFELFINGKEICNAYTE 436

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L +PIEQR RF+ + Q+     +E    DEDF   L   +P + G  MG DRL M +T A
Sbjct: 437 LNNPIEQRMRFKMQAQDINDGDDEAMITDEDFCVALEYGLPPTGGFGMGIDRLTMFMTDA 496

Query: 337 NNINEVIWTPFSQSNQE 353
            NI +VI  P  +   +
Sbjct: 497 ANIKDVILFPAMKPESD 513


>gi|283768797|ref|ZP_06341708.1| lysine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104583|gb|EFC05956.1| lysine--tRNA ligase [Bulleidia extructa W1219]
          Length = 646

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 94/370 (25%), Positives = 156/370 (42%), Gaps = 29/370 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YRRR              + R  I S++R Y     +IE+++ 
Sbjct: 146 LRPLPDKFHGLQDKEERYRRRYLDLITNDESRKVAILRPKIISAIRHYMDSQGYIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ      +  R F T     + + +  YL+ + E   K+L+  G E+++     +RN 
Sbjct: 206 VLQPLLTGAS-ARPFITH---HNALDRDFYLRIATELPLKRLIVGGLERVYEIGRIFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+   + +M     +    A     +  F F     +  +  +
Sbjct: 262 GMDLKHNPEFTTMEAYCAYSDMQGMMDLTEGLYETVAMEVFGKTDFEFMGKTISLKAPFK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEK 225
              + +A      ID    +   +          A++  I V  H  +   I S      
Sbjct: 322 KWNMVDAVKECTGIDFWKEMSVEEAL------QLAKEHHIEVEEHQKSVGHIISLFFEAF 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    I   T +  +P   S L      DPRFT+RFEL    IE+ NA  EL DPI+Q+
Sbjct: 376 CENK--IEQPTFIWGHPIEVSPL-AKKGKDPRFTERFELSIMGIEMNNAFSELNDPIDQK 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  ++  K+    E   +D+D++  L   +P + GI  G DR VML+TG ++I +V+ 
Sbjct: 433 QRFLDQLAAKEAGDEEASEMDQDYVEALEYGLPPTGGIGFGIDRFVMLLTGNDSIRDVLL 492

Query: 345 TPFSQSNQEE 354
            P  +    E
Sbjct: 493 FPTMKPLGSE 502


>gi|12044988|ref|NP_072798.1| lysyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|255660156|ref|ZP_05405565.1| lysyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351162|sp|P47382|SYK_MYCGE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|3844726|gb|AAC71353.1| lysyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078779|gb|ABY79397.1| lysyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 490

 Score =  308 bits (789), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 105/360 (29%), Positives = 173/360 (48%), Gaps = 27/360 (7%)

Query: 5   PSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY 51
           P +     D     R+R              LKR  I  S+R +  +N FIE+++ +LQ 
Sbjct: 140 PEKWHGLTDIETRARKRFLDLTYNLAMRDVFLKRTKIIKSIRSFLDQNGFIEVETPTLQA 199

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
             G   + + F T     + ++   YL+ + E + KKL+  G  K++     +RN     
Sbjct: 200 VLGGA-NAKPFKTHY---NALKADFYLRIANEIALKKLIIGGFNKVYEMGKMFRNEGVDT 255

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H PEFT +E Y+A+  +E ++     +I+   E  NQ  F++ N   N  +    IT+ 
Sbjct: 256 THNPEFTSIEIYQAYADFEVMLVLVEKLIQSLCESLNQFSFNWNNKTINLKTPFHKITMV 315

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEKIEPNL 230
           E   +   ID  +        D     L A++  +++  H      I +    +  E   
Sbjct: 316 ELIKKVTGIDFNSV------KDDQSAILLAEKHHVKLAKHQQNKQHIINLFFEQFCEQT- 368

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
            +   T +  YP   S LA   P++P FT+RFEL+    E+ NA  EL DP+EQR RFE+
Sbjct: 369 -LIEPTFVTHYPKAVSPLAKQDPSNPEFTQRFELFINGKEIANAYSELNDPLEQRKRFEQ 427

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +++EK+   +ET  +DE FL  L+  M  ++G+ +G DRLVML+   N+I +V++ P  +
Sbjct: 428 QLEEKQLGNDETSELDESFLEALSFGMVNTAGLGIGIDRLVMLLCECNSIRDVVFFPQLR 487


>gi|29833838|ref|NP_828472.1| lysyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|29610963|dbj|BAC75007.1| putative lysyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 1093

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 153/364 (42%), Gaps = 28/364 (7%)

Query: 1    MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     + +   RRR             +  R+    +LR+  ++  ++E+++ 
Sbjct: 741  LRPLPDKHRGLADPEAKVRRRYLDLVASPDARAVVRARSTAVQALRQGLLDRGYLEVETP 800

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F+T +   +     LYL+ +PE   K+L   G EK+F     +RN 
Sbjct: 801  MLQQIHGGA-NARPFTTHI---NAYDLDLYLRIAPELYLKRLCVGGLEKVFEMGRTFRNE 856

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                 H PEFTMLE Y+A   Y+ ++     +I+ AA  A    +        +      
Sbjct: 857  GVSYKHNPEFTMLEAYQAFADYDVMLDLTRELIQGAATAAFGGPVARKNGTEHDISGPWP 916

Query: 167  YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              TV  A +     +L              L+    +AG+    DD   D+   +    +
Sbjct: 917  VKTVYGAISEALGEELDAG------TSLEALHRHCDRAGVPYTADDGRGDVVLEMYERLV 970

Query: 227  EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
            E   G+   T    +P   S L   + ADPR  +R++L A   EL  A  EL DP+EQR 
Sbjct: 971  EERTGL--PTFYKDFPTDVSPLTRQHRADPRLAERWDLVAFGTELGTAYSELTDPMEQRR 1028

Query: 287  RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            R   +         E   +DEDFL  L   MP + G+ +G DRLVM +TG   I E +  
Sbjct: 1029 RLTAQSLLAAGGDPEAMELDEDFLDALEYAMPPTGGLGIGVDRLVMFLTGL-TIRETLPF 1087

Query: 346  PFSQ 349
            P  +
Sbjct: 1088 PLVR 1091


>gi|223982711|ref|ZP_03632941.1| hypothetical protein HOLDEFILI_00215 [Holdemania filiformis DSM
           12042]
 gi|223965307|gb|EEF69589.1| hypothetical protein HOLDEFILI_00215 [Holdemania filiformis DSM
           12042]
          Length = 496

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 156/369 (42%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    +RRR   L            R  I  +++ Y      +E+++ 
Sbjct: 140 LRPLPEKFHGLQDVEERFRRRYVDLIMNEDSRKIAMLRPKIIRAVQHYLDGQGLMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +    YL+ + E   K+L+  G E ++     +RN 
Sbjct: 200 VLQPILGGAA-ARPFVTH---HNTLDMDFYLRIATELPLKRLIVGGLEGVYEIGRLFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+   E +M     +    A     +  F+  +   +  +  +
Sbjct: 256 GMDPKHNPEFTTVEAYVAYSDIEGMMALNEGLFESVAMEVFGKTDFTLGDKQISLKAPYK 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEK 225
              + +A      +D    +   +          A++ G+ V  H+ T   I +    + 
Sbjct: 316 RWHMVDAVKEVTGVDFWKAMSVEEAL------ALAKEHGVEVQPHERTVGHIINLFFEQF 369

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    I   T +  +P   S LA     DPRFT RFEL     E  NA  EL DPI+QR
Sbjct: 370 CEEK--ITQPTFVYGHPVEISPLARKNAKDPRFTDRFELLIYGTEYSNAFSELNDPIDQR 427

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE++++ K+    E   +D D++  L   +P + GI +G DR VML+TG  +I EV+ 
Sbjct: 428 QRFEEQLKLKEMGDAEASEMDIDYVEALEYGLPPTGGIGIGIDRFVMLLTGQESIREVLL 487

Query: 345 TPFSQSNQE 353
            P  ++  E
Sbjct: 488 FPHMKNRNE 496


>gi|195953371|ref|YP_002121661.1| lysyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932983|gb|ACG57683.1| lysyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 569

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 97/363 (26%), Positives = 162/363 (44%), Gaps = 25/363 (6%)

Query: 1   MHQIPSQPWWNRDFH--YRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P +    +D    YR+R                R+ I  +LR++F +N+F+E+++ 
Sbjct: 215 LNNMPEKWHGIKDIEIKYRQRYLDLIANESSRKVFTLRSKIIKALRDFFDKNKFMEVETP 274

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ      T  R F T     +++   LYL+ +PE   KKL+  G  +++     +RN 
Sbjct: 275 ILQPIASGAT-ARPFVT---YHNYLESELYLRIAPELYLKKLIVGGIPRVYEIGKNFRNE 330

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E+Y A+  Y++L+K    +     ++   K    QN   N       
Sbjct: 331 GVDTTHNPEFTMVEFYAAYWDYKKLIKFTEELFDYLTDITGIKSIETQNGVINLKPPFRV 390

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
               E      + D    L + ++     L   A + GI  A+  T   +  ++    +E
Sbjct: 391 AKFFELLEEKTSKDKSFFLHHEEE-----LKKFANELGIPKAYTLTKPKLIEKVFEYTVE 445

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA  +  D    +RFELY    E+ NA  EL DP +Q  R
Sbjct: 446 DE--LIQPTFIIDFPKMLSPLAKTHRDDDELVERFELYINKKEIANAYSELNDPEDQAKR 503

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F ++  +K     E    D+DF+  L   MP ++G  +G DRLVML    ++I +VI  P
Sbjct: 504 FLEQKLQKATGDEEAMETDDDFVEALRYGMPPTAGEGIGIDRLVMLFANVDSIRDVILFP 563

Query: 347 FSQ 349
            ++
Sbjct: 564 ANR 566


>gi|328866150|gb|EGG14536.1| lysine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 513

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 80/369 (21%), Positives = 151/369 (40%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +H +P     +++  +R+R              + R+ +   +R Y     F+E+++  L
Sbjct: 153 LHMLPRVALTDQETRFRQRYLDMIINDNVKRNFVIRSKVIQGVRRYLDNLGFVEVETPML 212

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G     + F T     + + K ++++ +PE   K+L+  G ++++     +RN + 
Sbjct: 213 NMIAGGAA-AKPFKTH---HNALSKDMFMRIAPELYLKQLVVGGMDRVYEIGKQFRNEDI 268

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--------NCNP 161
              H PEFT  E+Y A+  Y  LM    +++       +       +           + 
Sbjct: 269 DHTHNPEFTTCEFYMAYVDYNDLMTMTEDMLSGIVRDIHGTNKLKYHPKGTDSEPIEIDF 328

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    I +     +   +D         +  R  L  Q ++  +  +   T + +  ++
Sbjct: 329 STPWRRIDMIPELEKC--LDAKIPTPYNSEECRLFLIEQCKKHNVDCSPPQTTARLLDKL 386

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E +E          +  +P   S L+  +   P  T+RFEL+    E CNA  EL +P
Sbjct: 387 VGEFLESQC--TNPAFIINHPEIMSPLSKYHRTIPGLTERFELFINQREACNAYTELNNP 444

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q  RFE++ + K    +E   ID  F   L   +P + G  +G DR VML++   NI 
Sbjct: 445 FVQIERFEEQAKAKAMGDDEAQLIDTVFTTSLQYGLPPTGGWGLGVDRFVMLLSDTYNIK 504

Query: 341 EVIWTPFSQ 349
           EVI  P  +
Sbjct: 505 EVILFPAMK 513


>gi|120404304|ref|YP_954133.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|296439672|sp|A1TAC7|LYSX_MYCVP RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|119957122|gb|ABM14127.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 1100

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 149/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     D   R              R  +  R+ +  ++RE  V   F+E+++ 
Sbjct: 743  LRPLPDKWKGLTDQEARVRARYVDLAVNTDARELIRARSAVLHAIRETLVAKDFLEVETP 802

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L   G E++F    A+RN 
Sbjct: 803  ILQQIHGGA-NARPFLTHI---NAYDLDLYLRIAPELYLKRLCVGGVERVFELGRAFRNE 858

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA+ AN      +          + 
Sbjct: 859  GVDFSHNPEFTLLEAYQAHADYHVWIDGCRELIQNAAQAANGAQVFMRPRADGVLEPVDI 918

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +            D   L L   +AGI          +   +    +E
Sbjct: 919  SGPWTVKTVHGAVSEALGEQIGPDTDLATLRLLCDRAGIPYLTHWDAGAVVLELYEHLVE 978

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R
Sbjct: 979  DQTRE--PTFYKDFPTSVSPLTRPHRSIPGVAERWDLVAWGVELGTAYSELTDPVEQRRR 1036

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1037 LQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFP 1095

Query: 347  FSQSN 351
             ++  
Sbjct: 1096 LAKPR 1100


>gi|160916179|ref|ZP_02078386.1| hypothetical protein EUBDOL_02206 [Eubacterium dolichum DSM 3991]
 gi|158431903|gb|EDP10192.1| hypothetical protein EUBDOL_02206 [Eubacterium dolichum DSM 3991]
          Length = 495

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 158/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YRRR   L            R  I  +++ Y      +E+++ 
Sbjct: 139 LRPLPEKFHGLQDVEERYRRRYVDLIMNPEAKRIALMRPRIIRAIQRYLDGKGLVEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + R F T     + +    Y++ + E   K+L+  G E ++     +RN 
Sbjct: 199 VLQPILGGA-NARPFVTH---HNTLDMDFYMRIATELPLKRLIVGGLEGVYEIGRLFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+   E +M+    ++   A  V      +++    +  +  +
Sbjct: 255 GMDKNHNPEFTTVEAYVAYSDMEGMMELTEGLMENVAFDVLGTTDVTWREKEISLKAPFK 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEK 225
            + + +       +D    +   D          A++  I V    T    I +    + 
Sbjct: 315 RLHMVDGIKEACGVDFWQEMSYEDAL------ALAKEHDIEVEKHHTSVGHIINLFFEKY 368

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    I   T +  +P   S L+   P DPRFT+RFEL     E CNA  EL DPI+Q+
Sbjct: 369 VEDT--IVQPTFVYGHPVEISPLSKRCPDDPRFTERFELLIDGAEFCNAFSELNDPIDQK 426

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE ++ EK+    E   +D DF+  L   +P + G+ +G DR VML+TG + I EV+ 
Sbjct: 427 QRFEAQLAEKENGNEEACEMDTDFVEALEYGLPPTGGVGIGIDRFVMLLTGQDTIREVLL 486

Query: 345 TPFSQSN 351
            P  ++ 
Sbjct: 487 FPHMKNR 493


>gi|311087328|gb|ADP67408.1| lysyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon
           pisum)]
          Length = 506

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 172/368 (46%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWWN--RDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +      ++  YR+R                R+ I +++R + +EN F+E+++ 
Sbjct: 150 LKPLPDKFHGLSNQEIRYRKRYLDLISNNKLYSIFKNRSNIITAIRNFMIENDFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG   + R F T     + I   +YL+ +PE   KKL+  G E+IF     +RN 
Sbjct: 210 MLQNIPGGA-NARPFIT---YHNEIDSQMYLRIAPELYLKKLIIGGFERIFELNRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF-SEPE 166
                H PEFTM+E Y A+ +YE +M+   N+ +   +   Q      N N   F     
Sbjct: 266 GVSARHNPEFTMMEAYIAYSNYEDMMELTENLFKNITKFLFQDNKIIFNNNNFDFSQPFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ ++   +      +T+ + D  D + +   A+  GI+V        I + I  + +
Sbjct: 326 RLTMTDSILEF-----NSTITSSDLKDFYKIREFAKSIGIKVEKKWGCGQIETEIFEKTV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T + +YP   S LA     +   T RFEL+    E+ N   EL D  +Q+ 
Sbjct: 381 EKK--LIQPTFITQYPVEVSPLARRNDINLNITDRFELFIGGYEIGNGFSELNDVEDQKT 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++Q+  K  N+    D++++  L   +P +SG+ +G DRL+M++T   +I +VI  
Sbjct: 439 RFLNQIQKSNKEDNKNLFYDKEYIEALKYGLPPTSGLGIGIDRLIMILTNQISIRDVILF 498

Query: 346 PFSQSNQE 353
           P  +  ++
Sbjct: 499 PTLRPFKK 506


>gi|169806644|ref|XP_001828066.1| lysyl-tRNA synthetase, mitochondrial [Enterocytozoon bieneusi H348]
 gi|263511619|sp|A9CS74|SYKC_ENTBH RecName: Full=Probable lysyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS
 gi|161779194|gb|EDQ31218.1| lysyl-tRNA synthetase, mitochondrial [Enterocytozoon bieneusi H348]
          Length = 518

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 95/352 (26%), Positives = 156/352 (44%), Gaps = 19/352 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            +   R   + R+ I   +REYF +  F+E+++  +    G  +  R F T     + ++
Sbjct: 174 VNQDSRNRFITRSKIIQHIREYFNKIGFLEVETPIMNNKVGGAS-ARPFLTH---HNELK 229

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
             LYL+ +PE   K+L+  G E++F     +RN      H PEFT +E+Y A+  Y  LM
Sbjct: 230 IDLYLRVAPELFLKQLVVGGLERVFEIGKNFRNEGIDLTHNPEFTAIEFYMAYADYNDLM 289

Query: 134 KDCMNII-----------RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                ++           +   +   ++      V  +  +  + I + E   +  NI+ 
Sbjct: 290 CIVEELLSGLVKLIKGSSKFIYQPCKRETIDEIKVPLDFSTPFKRIDILEELNKSLNIE- 348

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            T  +        LL  +A++  I V +  T + +    + E IEP       T +  +P
Sbjct: 349 LTGENIEKPETLELLIKKAEELNIIVNNPKTLNRMLDAFIGEYIEPQC--INPTFVTGFP 406

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
              S LA  + +    T+RFE++    EL NA  EL  P  QR RF  +  +     +E 
Sbjct: 407 ICMSPLAKDHRSKAGITERFEMFCNGKELVNAYTELNIPDLQRKRFLMQDADANAGDDEA 466

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P DEDF   L   +P + G  +G DRLVM +T A NI +VI  P  +  Q+
Sbjct: 467 MPNDEDFCQVLEYGLPPTGGCGIGIDRLVMYLTDAANIRDVILFPTLKPEQK 518


>gi|302842054|ref|XP_002952571.1| hypothetical protein VOLCADRAFT_62618 [Volvox carteri f.
           nagariensis]
 gi|300262210|gb|EFJ46418.1| hypothetical protein VOLCADRAFT_62618 [Volvox carteri f.
           nagariensis]
          Length = 493

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 154/365 (42%), Gaps = 30/365 (8%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ I S+LR    +  FIE+++ 
Sbjct: 141 LLPLPDKWHGLSDVEKRYRQRYLDLIMTAEVRDTFRARSRIISTLRRQLEDRGFIEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L+   G     R F T     + + + L L+ + E   K+++  G E++F     +RN 
Sbjct: 201 VLESVAGGA-DARPFRT---FHNSLGRDLTLRIATELHLKRMVVGGFERVFELGRVFRNE 256

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     +IR  A         S+Q V  +      
Sbjct: 257 GLSSRHNPEFTSVEIYQAYADYNDMMNLTEELIRVCAMEVRGSAQVSYQGVAIDFSQPFR 316

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+A+       +D    +    Q          + A        +   + + +     
Sbjct: 317 RVTMADLVREACGLDFEAAMAAARQVGSAEAAAAVRSA-------PSLGHLLNEMFEAVG 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E   G+   T +  +P   S LA  + + P  T+RFEL+    E  NA  EL DP++QR 
Sbjct: 370 EA--GLVQPTFVLEHPVEISPLAKPHRSKPGVTERFELFIYGREHANAFSELTDPVDQRA 427

Query: 287 RFEKEMQEKKKIYNETYP--IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           RFE ++      + E     +D DF+A L   MP + G+ +G DRLVML+T + +I +VI
Sbjct: 428 RFEAQVARHNAAFQERQKVALDTDFIAALEYGMPPTGGLGIGVDRLVMLLTDSPSIRDVI 487

Query: 344 WTPFS 348
             P  
Sbjct: 488 AFPTM 492


>gi|323450275|gb|EGB06157.1| hypothetical protein AURANDRAFT_1254 [Aureococcus anophagefferens]
          Length = 567

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 150/381 (39%), Gaps = 37/381 (9%)

Query: 1   MHQIP----SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEID 45
           +H +P    +    + D  +R+R                R+ I SS+R+Y  +  F+E++
Sbjct: 194 LHMLPKGQGASVLKDPDTRFRKRYLDLMVNEGAADVFAIRSRIVSSVRKYLDDRGFLEVE 253

Query: 46  SMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
           +  +    G  T  + F T     + +   ++++ +PE   K  +  G ++++     +R
Sbjct: 254 TPMMNMVAGGAT-AKPFVTYF---NELGINVFMRVAPELYLKTCVVGGLDRVYEIGRQFR 309

Query: 106 NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV------NC 159
           N      H PEFT  E+Y A+  Y  LM    ++I    +  +                 
Sbjct: 310 NEGMDLTHNPEFTTCEFYMAYADYHDLMDMTEDMISSLVKDIHGTYKVKYQPKEGDEIEI 369

Query: 160 NPFSEPEYITVAEAFAR--------YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
           +       + +     +         A +D    L  PD   + L    A +        
Sbjct: 370 DFSPPWPRVPMLAGLVKELAKLSIDAAWLDAPGALSLPDAAAKLLAVHSAAKID-PCQKP 428

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
            T + +   ++ E +E N        +  +PA  S LA  +   P  T+RFEL+    EL
Sbjct: 429 HTVARLVDNLVGELLEDNCV--NPAFITEHPAEMSPLAKYHRDKPGLTERFELFVAGKEL 486

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
           CNA  EL +P  QR RF  +  +     +E    DEDF   L   +P + G   G DRL 
Sbjct: 487 CNAYTELNNPFVQRERFAAQAGDVDAGDDEAMVKDEDFCVALEHGLPPTGGWGCGIDRLT 546

Query: 331 MLVTGANNINEVIWTPFSQSN 351
           M ++  N+I EV+  P  +  
Sbjct: 547 MFLSNKNSIREVLLFPAMKPE 567


>gi|108799949|ref|YP_640146.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119869059|ref|YP_939011.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|123178636|sp|Q1B7P4|LYSX_MYCSS RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|296439668|sp|A1UHB3|LYSX_MYCSK RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|108770368|gb|ABG09090.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119695148|gb|ABL92221.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 1112

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     D   R              R  +  R+ +  ++R+      F+E+++ 
Sbjct: 755  LRPLPDKWKGLTDQEARVRARYVDLAVNTEARDLIRARSGVLHAIRDTLYHKGFLEVETP 814

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L   G E++F    A+RN 
Sbjct: 815  ILQQIHGGA-NARPFLTHI---NAYDLDLYLRIAPELYLKRLCVGGVERVFELGRAFRNE 870

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA  AN +    +  +       + 
Sbjct: 871  GVDFSHNPEFTLLEAYQAHADYHVWIDGCRELIQNAAMAANGEHVFLRPRDDGVLEPVDI 930

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +            +   L   A  AGI          +   +    +E
Sbjct: 931  SGPWTVKTVHEAVSEALGEHIDAATELPTLRKLADAAGIPYLTHWDEGAVVLEMYEHLVE 990

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + +     +R++L A  +EL  A  EL DP+EQR R
Sbjct: 991  DR--TQKPTFYKDFPTSVSPLTRPHRSIAGVAERWDLVAWGVELGTAYSELTDPVEQRRR 1048

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             + +         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1049 LQAQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFP 1107

Query: 347  FSQSN 351
             ++  
Sbjct: 1108 LARPR 1112


>gi|15617036|ref|NP_240249.1| lysyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219681788|ref|YP_002468174.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471490|ref|ZP_05635489.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
           pisum)]
 gi|11134965|sp|P57512|SYK_BUCAI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|25293056|pir||G84980 lysine-tRNA ligase (EC 6.1.1.6) [imported] - Buchnera sp.  (strain
           APS)
 gi|10039101|dbj|BAB13135.1| lysyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219624631|gb|ACL30786.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 506

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 172/368 (46%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWWN--RDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +      ++  YR+R                R+ I +++R + +EN F+E+++ 
Sbjct: 150 LKPLPDKFHGLSNQEIRYRKRYLDLISNNKLYSIFKNRSNIITAIRNFMIENDFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG   + R F T     + I   +YL+ +PE   KKL+  G E+IF     +RN 
Sbjct: 210 MLQNIPGGA-NARPFIT---YHNEIDSQMYLRIAPELYLKKLIIGGFERIFELNRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF-SEPE 166
                H PEFTM+E Y A+ +YE +M+   N+ +   +   Q      N N   F     
Sbjct: 266 GVSARHNPEFTMMEAYIAYSNYEDMMELTENLFKSITKFLFQDNKIIFNNNNFDFSQPFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ ++   +      +T+ + D  D + +   A+  GI+V        I + I  + +
Sbjct: 326 RLTMTDSILEF-----NSTITSSDLKDFYKIREFAKSIGIKVEKKWGCGQIETEIFEKTV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T + +YP   S LA     +   T RFEL+    E+ N   EL D  +Q+ 
Sbjct: 381 EKK--LIQPTFITQYPVEVSPLARRNDINLNITDRFELFIGGYEIGNGFSELNDVEDQKT 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++Q+  K  N+    D++++  L   +P +SG+ +G DRL+M++T   +I +VI  
Sbjct: 439 RFLNQIQKSNKEDNKNLFYDKEYIEALKYGLPPTSGLGIGIDRLIMILTNQISIRDVILF 498

Query: 346 PFSQSNQE 353
           P  +  ++
Sbjct: 499 PTLRPFKK 506


>gi|148654264|ref|YP_001274469.1| lysyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|172048100|sp|A5UPG6|SYK_ROSS1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|148566374|gb|ABQ88519.1| lysyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 489

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 160/366 (43%), Gaps = 27/366 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++  P +     D   R R                  R  I S++R +  E  F+E+++ 
Sbjct: 135 LNPPPEKWHGLSDIEERHRQRYLDLIVNPEVRDVFRTRAKIVSTMRRFLDERGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +LQ   G  +  R F T     + +++ LYL+ + E   K+L+  G E+++  +  +RN 
Sbjct: 195 TLQPIYGGAS-ARPFITH---HNQLKQDLYLRIAVELYLKRLIVGGFERVYEISKVFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  Y  +M+   ++ R  A EVA      FQ    +     +
Sbjct: 251 GVDRTHNPEFTMMECYQAYADYNDMMRLVEDLYRTLALEVAGSTTIVFQGHTIDFGPAWQ 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++  A A    ID+       +  +   L    +  G++V    +W      I    +
Sbjct: 311 RVSIPTAIAARTGIDIL------ELTELEPLQRAIRAVGLKVDLKPSWGKQVDEIFSVYV 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P   +   T +  +P   S LA   P  P   +RFE     +E+ NA  EL DP++Q  
Sbjct: 365 QPE--LIQPTFVIDHPVALSPLAKRRPDQPLLVERFEPIVAGMEVGNAFTELNDPLDQEQ 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ +      +E   +D DFL  L   MP + G+ +G DR VML T   +I EVI  
Sbjct: 423 RFLEQGRAYDAGDDEAQQMDIDFLNALMYGMPPTGGLGIGIDRTVMLFTDQPSIREVILF 482

Query: 346 PFSQSN 351
           P  +  
Sbjct: 483 PHMRPR 488


>gi|311896806|dbj|BAJ29214.1| putative lysyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 530

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 147/368 (39%), Gaps = 23/368 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R+R             LL R  +  S+R  + +  ++E+++ 
Sbjct: 147 LRPLPDKHKGLSDPEARVRQRYVDLIVNPEAREMLLLRTKVVRSIRRTYEDRGYLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + R F T +   +     LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 207 MLQPIHGGA-NARPFKTHI---NAYDIELYLRIATELYLKRLVVGGAEKVFEINRNFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT LE Y A+  Y+   +    II  AA  A                E + 
Sbjct: 263 GADATHNPEFTALESYEAYGDYDTQAELIRAIIVNAARDALGTTVVRGVGPDGAEHEIDL 322

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI--RVAHDDTWSDIFSRILIEK 225
               E  + Y  I      +         L   A +AG+   +        I   ++   
Sbjct: 323 AEPWEEVSVYPGISARLGTEVTPATTEEELRELAGKAGLGEYLDPKWDHGQIVLELVERL 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E +      T +  YP   S L   + +     ++++L     E+  A  EL+DP+EQR
Sbjct: 383 LEHHA--IKPTFIKDYPTSVSPLTRRHRSIEGVAEKWDLVIFGTEIGTAYSELIDPVEQR 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R   +         E   +DEDFL  L   MP + G+ +G DRL+ML+TG  NI E + 
Sbjct: 441 ARLTAQSLLAAGGDVEAMQLDEDFLRALEYAMPPTGGLGLGVDRLIMLLTG-KNIRETVL 499

Query: 345 TPFSQSNQ 352
            P  +  +
Sbjct: 500 FPLVKPEK 507


>gi|323342365|ref|ZP_08082597.1| lysine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463477|gb|EFY08671.1| lysine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 494

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 153/367 (41%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YRRR   L            R +I  S+R++F +   +E+++ 
Sbjct: 140 LRPLPDKFHGLQDKEERYRRRYLDLIMNEDSRRTAMLRPLIMRSIRKFFDDRGLVEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L          R F T     + +    YL+ + E   K+L+  G E ++     +RN 
Sbjct: 200 VLTPILSGAA-ARPFVTH---HNTLDMEFYLRIATELPLKRLIVGGMEGVYEIGRLFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+     +M     ++   A  V       +Q    +      
Sbjct: 256 GMSPKHNPEFTTIEAYVAYADMYDMMDISEGLLEYLAHEVLGTTEIVYQGTELSLKGPYR 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEK 225
            + + +       +D      +            A++  I +A    ++  + +      
Sbjct: 316 RVHMVDIIKDVTGVDFWNVKSD------EEAVAIAKEHNINMAKHQLSFGHVVNEFFETF 369

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    I   T +  +P   S LA   P DPRFT RFE++    E  NA  EL DPI+QR
Sbjct: 370 CEEK--IVQPTFVYGHPVEVSPLAKKNPEDPRFTDRFEMFIDAREYANAFSELNDPIDQR 427

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE ++ E++    E   +D D++  L   MP + GI +G DRL+ML+T + +I +V+ 
Sbjct: 428 ERFESQLSERELGNEEANEMDVDYVEALEYGMPPTGGIGIGLDRLIMLLTDSASIRDVLL 487

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 488 FPHMKKR 494


>gi|157363382|ref|YP_001470149.1| lysyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166980071|sp|A8F4K1|SYK_THELT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|157313986|gb|ABV33085.1| lysyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 498

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 88/370 (23%), Positives = 163/370 (44%), Gaps = 31/370 (8%)

Query: 2   HQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +    +D    YR+R                R      +R++     F+E+++  
Sbjct: 138 RPLPEKWHGLKDKEVAYRQRYVDMIANDSTLERFRIRYEAIRFIRDFLNRLDFVEVETPV 197

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L + PG     + F T L   + +   +YL+ +PE   K+ +  G EK++     +RN  
Sbjct: 198 LNFIPGGGA-AKPFITRL---EALDCEMYLRIAPELHLKRYIVGGFEKVYEIGKNFRNEG 253

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPEY 167
               H PEFT +E Y+A+  Y  +M+   ++I      +      ++Q V  +     + 
Sbjct: 254 ISYKHSPEFTSIEIYQAYADYNDMMELTESLISELVLHLYGSYKLTYQGVELDFKPPWKR 313

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I + E      ++D+    D         LY   ++ G+      +   +  ++     E
Sbjct: 314 IKMREFIKSRLDVDILEDND-------EKLYYVLKERGVE-PDTKSREKMIEKLWDLVEE 365

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T L  +P   S LA  +  DPR T+RFE     +E+ NA  EL DP +Q  R
Sbjct: 366 E---VIQPTFLMDHPVDISPLAKRHRDDPRLTERFEPIIFGMEMGNAFSELNDPDDQLER 422

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+ +++ +     E + +D DF+  L   +P + G+ +G DRL+ML+T + +I +VI  P
Sbjct: 423 FKAQLKLRDAGDEEAHRMDLDFIRALEYGLPPTGGLGIGIDRLIMLLTNSPSIRDVIAFP 482

Query: 347 FS-QSNQEEI 355
              Q+ ++++
Sbjct: 483 LVSQTEEDDL 492


>gi|300866148|ref|ZP_07110869.1| lysyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300335860|emb|CBN56029.1| lysyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 518

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 92/376 (24%), Positives = 158/376 (42%), Gaps = 31/376 (8%)

Query: 3   QIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
           Q P   +   + +   R R                R+ I  S+R Y  +  F EI++ +L
Sbjct: 148 QFPDAYYGVNDPEICRRHREMDLAGNQASFHRFALRSRILQSIRSYLWKADFYEIETPTL 207

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN   
Sbjct: 208 QAIYGGAA-ARPFITH---HNALDVDLYLRIAPELFLKRAICGGFDRVFELGRVFRNEGV 263

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ--KIFSFQNVNCNPFSEPEY 167
              H PEFT LE Y+++  Y  ++    +++  AA       K    Q    +   + +Y
Sbjct: 264 DSTHNPEFTSLEVYQSYADYFDILTVVEDVMCYAANAIFGDIKEIENQGEIISLERKFDY 323

Query: 168 ITVA-----EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA----HDDTWSDIF 218
                    + +     ++        D     L    A    + +        +   + 
Sbjct: 324 THTYPGFNGKHWQVKTMVEAVKDETQLDFESLSLEEAIASAQKLELHLSKLEKQSLGYVL 383

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  + + P   +   T +  +P   S LA  + + P F +RFEL+    E  N   EL
Sbjct: 384 YAIFDKVVVPK--LIQPTFIIDFPVEVSPLAKGHRSKPGFVERFELFINGTEYSNGFSEL 441

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP EQR RFE+++ +K    +E +P+DEDF+  L+  MP  +G+ +G DRLVML+T   
Sbjct: 442 NDPKEQRKRFEEQLAQKDAGDDEAHPMDEDFIQALSLGMPNCAGMGIGIDRLVMLLTNTQ 501

Query: 338 NINEVIWTPFSQSNQE 353
           +I +V+  P  +  ++
Sbjct: 502 SIRDVVMFPTMRPVKD 517


>gi|219682343|ref|YP_002468727.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|219622076|gb|ACL30232.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|311086168|gb|ADP66250.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon
           pisum)]
 gi|311086740|gb|ADP66821.1| lysyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 506

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 172/368 (46%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWWN--RDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +      ++  YR+R                R+ I +++R + +EN F+E+++ 
Sbjct: 150 LKPLPDKFHGLSNQEIRYRKRYLDLISNNKLYSIFKNRSNIITAIRNFMIENDFLEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG   + R F T     + I   +YL+ +PE   KKL+  G E+IF     +RN 
Sbjct: 210 MLQNIPGGA-NARPFIT---YHNEIDSQMYLRIAPELYLKKLIIGGFERIFELNRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF-SEPE 166
                H PEFTM+E Y A+ +YE +M+   N+ +   +   Q      N N   F     
Sbjct: 266 GVSARHNPEFTMMEAYIAYSNYEDMMELTENLFKSITKFLFQDNKIIFNNNNFDFSQPFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ ++   +      +T+ + D  D + +   A+  GI+V        I + I  + +
Sbjct: 326 RLTMTDSILEF-----NSTITSSDLKDFYKIREFAKSIGIKVEKKWGCGQIETEIFEKTV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T + +YP   S LA     +   T RFEL+    E+ N   EL D  +Q+ 
Sbjct: 381 EKK--LIQPTFITQYPVEVSPLARRNDINLNITDRFELFIGGYEIGNGFSELNDVEDQKT 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  ++Q+  K  N+    D++++  L   +P +SG+ +G DRL+M++T   +I +VI  
Sbjct: 439 RFLNQIQKSNKEDNKNLFYDKEYIEALQYGLPPTSGLGIGIDRLIMILTNQISIRDVILF 498

Query: 346 PFSQSNQE 353
           P  +  ++
Sbjct: 499 PTLRPFKK 506


>gi|251770987|gb|EES51571.1| lysyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 508

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 159/370 (42%), Gaps = 31/370 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              + R++I   +R +     FIE+++ 
Sbjct: 150 IRPLPDKWHGLSDTEARYRQRYVDLIVTPDTHRVFVTRSLIVRFIRRFMDGEGFIEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q +PG     R FST     + +   L+L+ +PE   K+L+  G  +++     +RN 
Sbjct: 210 MMQPTPGGA-LARPFSTH---HNALDLELFLRIAPELYLKRLIVGGMTRVYEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ SYE+LM     ++   A  +       F +   +      
Sbjct: 266 GVSTRHNPEFTMMEFYAAYASYEELMDLTERLLSDLARHIHGTTRLPFGDWEIDLTPPFR 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD----DTWSDIFSRIL 222
            I+  ++      +         D  D   L        + V          + + + + 
Sbjct: 326 RISYLDSIGEAFGLSP------EDYFDDRRLLDLLHSKNLPVPEPRPGKPYVALLLNVLF 379

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
            E IEP   +   T +  YP   S LA     DP  T RFEL+   IE+ N  +EL DP 
Sbjct: 380 EEAIEPT--LIQPTFVTGYPKAISPLARSSENDPEVTDRFELFIAGIEVANGFNELNDPD 437

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           EQ  RF  + + ++    E  P D D++  L   +P ++G  +G DRLVML+T   +I +
Sbjct: 438 EQLRRFLAQQESRQSGDLEAPPPDYDYVRALEYGLPPTAGEGIGIDRLVMLLTNQTSIRD 497

Query: 342 VIWTPFSQSN 351
           V+  P  + +
Sbjct: 498 VLLFPLLRPD 507


>gi|328860106|gb|EGG09213.1| hypothetical protein MELLADRAFT_104502 [Melampsora larici-populina
           98AG31]
          Length = 613

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 86/393 (21%), Positives = 156/393 (39%), Gaps = 44/393 (11%)

Query: 1   MHQIP-------------SQPWWNRDFHYRRR-------------PFLLKRNMIQSSLRE 34
           +HQ+P                +  +D   R R                + R  I + +R 
Sbjct: 224 LHQLPRAETSVVTESGTTETKFGFKDQEQRHRKRYLDLIMNKDVRDVFVTRARIINYVRR 283

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +  +  F+E+++  +    G  T  + F T     + +   L+L+ +PE   K+L+  G 
Sbjct: 284 FLDDLGFLEVETPMMNMIAGGAT-AKPFITH---HNSLGLDLFLRIAPELYLKELVVGGL 339

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
           ++++     +RN      H PEF++ E+Y A+     LM     +I           +  
Sbjct: 340 DRVYEIGRVFRNESIDLTHNPEFSICEFYMAYADMYDLMDLTETLISGLVYKITGGSYKI 399

Query: 155 QNV----------NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR-HLLYLQAQQ 203
                          +     +   + E       +   +  D  D+      L     +
Sbjct: 400 DYHPEGLNSEKVYTLDFSRPWKRFNMIEELESQLKVKFPSGKDFEDKELMTKFLDELCVK 459

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
             +  +   T S +  +++ E IE        + +  +P   S LA    +     +RFE
Sbjct: 460 HNVDCSAPRTNSRLLDKLVGEFIENQC--ISPSFIVGHPQFMSPLAKRDRSKVGLCERFE 517

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
            +    E+CNA  EL DP +QR RFE++ ++K    +E   IDE F+  L   +P + G 
Sbjct: 518 TFVATKEICNAYTELNDPFDQRERFEEQTRQKAAGDDEAQGIDETFIDALEHGLPPTGGW 577

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
            +G DRLVML+T  N+I EV+  P ++   +E+
Sbjct: 578 GLGIDRLVMLLTDNNSIKEVLCFPANKPLPKEV 610


>gi|300087728|ref|YP_003758250.1| lysyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527461|gb|ADJ25929.1| lysyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 493

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 156/368 (42%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-------------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D   R R                + R  I S +R +   N F+E+++ 
Sbjct: 138 LQPLPEKWHGLQDTEKRHRQRYLDLISNPEGRNIFITRCSIISGIRNFLNNNGFLEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         R F T     + + + +YL+ + E   K+LL  G + ++     +RN 
Sbjct: 198 VLQSQACGAA-ARPFVT---YHNALDQSMYLRIALELYLKRLLVGGFDGVYEIGRIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y+A+  Y  +M     ++     ++       + ++  +      
Sbjct: 254 GISVKHNPEFTMLECYKAYADYNDMMDLTEKMVSGIVEQIYGGYQAPYGDITLDFTPPWP 313

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +         + +D           D   L  +  ++G+          +   ++ + I
Sbjct: 314 RLDFRTLLLEKSGVDFLA------YSDADGLRNKMIESGLEADVAKDKGQLIDELVAQFI 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EPN  +     L  YP   S LA   P +    +RFE +A  +E+ NA  EL DP EQ  
Sbjct: 368 EPN--LVQPCFLIDYPIELSPLAKTKPGESGIVERFEAFAHGMEIANAFSELNDPQEQYL 425

Query: 287 RFEKEMQ-EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           RF ++++ E +   ++T  ID DF+  L   MP + G+ +G DRLVML+T   +I EVI 
Sbjct: 426 RFAQQLEGETQSQTDDTETIDRDFITALEYGMPPTGGLGIGIDRLVMLLTNQKSIREVIL 485

Query: 345 TPFSQSNQ 352
            P  ++ +
Sbjct: 486 FPTLKTKE 493


>gi|156740037|ref|YP_001430166.1| lysyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189082965|sp|A7NFC6|SYK_ROSCS RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|156231365|gb|ABU56148.1| lysyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 489

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++  P +     D   R R                  R  I  ++R +  E  F+E+++ 
Sbjct: 135 LNPPPEKWHGLSDIEERHRQRYLDLIVNPEVRDVFRTRATIVRTMRRFLDERGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +LQ   G  +  R F T     + +++ LYL+ + E   K+L+  G E+++  +  +RN 
Sbjct: 195 TLQPIYGGAS-ARPFITH---HNQLKQDLYLRIAVELYLKRLIVGGFERVYEISKVFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  Y  +M+   ++ R  A          FQ    +      
Sbjct: 251 GVDRTHNPEFTMMECYQAYADYHDMMRLVEDLYRALALEVTGSTTIVFQGQTIDFGPAWR 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++  A A    ID+       +  +   L    + AG++V     W      +    +
Sbjct: 311 RVSIPAAIAERTGIDIL------ELTELEPLQEAIRAAGLKVDLKPGWGRQVDELFSVYV 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P   +   T +  +P   S LA   P  P   +RFE     +E+ NA  EL DP++Q  
Sbjct: 365 QP--ALIQPTFVLDHPVALSPLAKRRPDQPLLVERFEPVVAGMEIGNAFTELNDPLDQEQ 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ +      +E   +D DFL  L   MP + G+ +G DR VML T   +I EVI  
Sbjct: 423 RFLEQGRAYDAGDDEAQQMDVDFLNALMYGMPPTGGLGIGIDRTVMLFTDQPSIREVILF 482

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 483 PHLRPRE 489


>gi|164660706|ref|XP_001731476.1| hypothetical protein MGL_1659 [Malassezia globosa CBS 7966]
 gi|159105376|gb|EDP44262.1| hypothetical protein MGL_1659 [Malassezia globosa CBS 7966]
          Length = 506

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 152/378 (40%), Gaps = 32/378 (8%)

Query: 1   MHQIPSQP---WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDS 46
           +  +P      + +++  YR+R              + R      +R Y     F+E+++
Sbjct: 134 LKMLPKASGGGFTDQEQRYRKRYLDLIMNQHVRDIFVTRARTIQYVRRYLDSLGFLEVET 193

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             +    G  +  + F T     + ++  L+++ +PE   K+L+  G ++++     +RN
Sbjct: 194 PMMNQIAGGAS-AKPFITH---HNDLKMDLFMRIAPELYLKELVVGGLDRVYEVGRVFRN 249

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-----------NQKIFSFQ 155
                 H PEFT  E+Y A+     LM    +++    +              ++  + +
Sbjct: 250 ESIDQTHNPEFTTCEFYMAYADMYDLMDITESMVSGLVKAVTGGYKVTYHPDGKEDPNGR 309

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
               +  +  +   +     +   +          +  R  L     +  +  +   T +
Sbjct: 310 VYEIDFSTPWKRFEMIPELEKQLQVKFPPADQLHTEEARQWLSDLCAKNNVDCSEPRTAN 369

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            +  +++ E IE        + +  +P   S LA  +   P   +RFE +    E+ NA 
Sbjct: 370 RLIDKLVGEYIESQCV--NPSFIIGHPQIMSPLAKRHRDIPGLCERFEAFVATKEIANAY 427

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP  QR  FE++ ++K    +E   +D  FL  L   +P + G  MG DRLVM +T
Sbjct: 428 TELNDPWVQRENFEEQARQKDAGDDEAQAVDHVFLDALEHGLPPTGGWGMGIDRLVMFLT 487

Query: 335 GANNINEVIWTPFSQSNQ 352
            +N I EV+  P ++  Q
Sbjct: 488 DSNTIKEVLAFPANKPEQ 505


>gi|111020719|ref|YP_703691.1| lysyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123046073|sp|Q0SAA3|LYSX_RHOSR RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|110820249|gb|ABG95533.1| lysine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 1114

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/372 (26%), Positives = 156/372 (41%), Gaps = 33/372 (8%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     + +   R+R             L  R+ +  SLR+      F+E+++ 
Sbjct: 756  LHPLPDKWKGLSDPETRVRQRYVDLAINSDARRLLEARSAVVKSLRDSLGGRGFLEVETP 815

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   +   F T +   +     LYL+ +PE   K+L  AG EK+F     +RN 
Sbjct: 816  ILQQVHGGA-NAAPFLTHI---NAYNLDLYLRIAPELYLKRLCVAGMEKVFEIGRVFRNE 871

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                 H PEFT+LE Y AH  YE++M  C  +I+ AA  A  +    +       V  + 
Sbjct: 872  GVDFKHNPEFTILEAYEAHSDYEKMMVLCRELIQTAAIAAYGREIIMRPGPDGALVEVDI 931

Query: 162  FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
              E    T+ +A A    +D+       +      L     +  I          +   +
Sbjct: 932  SGEWPVKTMHQAVAEKLGVDVSPETPLTE------LQRLCDEHEIPYQSTWDAGAVAQEM 985

Query: 222  LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
                +E        T    +P   S L   +P  P    +++L A  +EL  A  EL DP
Sbjct: 986  YEHLVEDYTEF--PTFYTNFPTSMSPLTRPHPTIPGVAAKWDLVAWGVELGTAYSELTDP 1043

Query: 282  IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNIN 340
            ++QR+R  ++         E   +DEDFL  L   MP + G+ MG DR+VML+TG  +I 
Sbjct: 1044 VDQRNRLTEQSMLAAGGDEEAMELDEDFLQALEHAMPPTGGLGMGVDRVVMLITG-GSIR 1102

Query: 341  EVIWTPFSQSNQ 352
            E +  P ++  Q
Sbjct: 1103 ETLAFPLAKPRQ 1114


>gi|255564836|ref|XP_002523412.1| lysyl-tRNA synthetase, putative [Ricinus communis]
 gi|223537362|gb|EEF38991.1| lysyl-tRNA synthetase, putative [Ricinus communis]
          Length = 585

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 104/390 (26%), Positives = 170/390 (43%), Gaps = 44/390 (11%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR  I S +R+    + F+E+++ 
Sbjct: 202 LLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRKRAKIVSEIRKTVESSGFLEVETP 261

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + + + LYL+ + E   K++L  G EK++     +RN 
Sbjct: 262 VLQGAAGGA-EARPFVT---YHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNE 317

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y+ +M     I+ RCA  V  +    +Q V+        
Sbjct: 318 GISTRHNPEFTTIEMYEAYSDYQSMMNMAEEIVTRCALAVHGKLTIDYQGVDVCLERPWR 377

Query: 167 YITVAEAFARYANIDLGTTLDN----PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
             T+         ID     ++     D   R+L  +   +    V    +  ++ + + 
Sbjct: 378 RETMHNLVKEATGIDFNELGNDLKVAKDTTLRNLGPVLEHKDRSSVEGCSSVGNLLNEVF 437

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +EP   +   T +  YP   S LA  +      T+RFEL+ C  EL NA  EL DP+
Sbjct: 438 EIVVEPK--LLQPTFVLDYPIEISPLAKPHRRHVGLTERFELFICGRELANAFSELTDPM 495

Query: 283 EQRHRFEKEMQ---EKKKIYNETYP----------------IDEDFLACLT-EMPQSSGI 322
           +QR R E++++   EK+   +E +                 +D+DFL  L   MP +SG+
Sbjct: 496 DQRGRLEEQVRQHNEKRSTISEAHKEEEKKDEQEDDSYSVTLDDDFLTALEYGMPPASGM 555

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +G DRLVML+T + +I +VI  P  +  Q
Sbjct: 556 GLGIDRLVMLLTNSASIRDVIAFPVLKVQQ 585


>gi|226499948|ref|NP_001141771.1| hypothetical protein LOC100273907 [Zea mays]
 gi|194705876|gb|ACF87022.1| unknown [Zea mays]
          Length = 437

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 82/364 (22%), Positives = 158/364 (43%), Gaps = 28/364 (7%)

Query: 9   WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R+ I S +R++  + +F+E+++  +    G   
Sbjct: 82  LRDQETRYRQRYLDLMVNHEVRHIFKTRSKIVSFIRKFLDDREFLEVETPMMNMIAGGAA 141

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   L+++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 142 -ARPFVTH---HNELNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 197

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI--------FSFQNVNCNPFSEPEYIT 169
           T  E+Y A+  Y  LM+    ++    +               +   +  +       I 
Sbjct: 198 TTCEFYMAYADYNDLMELTETMLSGMVKDLTGGYKIKYHANGVTNPPIEIDFTPPFRRID 257

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + +     AN+ +   L + +      L     +  ++     T S +  +++   +E  
Sbjct: 258 MIKDLEAMANLSIPKDLSSDEAN--RYLIEACVKYDVKCPPPQTTSRLLDKLVGHFLEET 315

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL DP+ QR RFE
Sbjct: 316 CV--NPTFIINHPEIMSPLAKWHRSRPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFE 373

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +++++++   +E   +DE F   L   +  + G  +G DRL ML+T + NI EV+  P  
Sbjct: 374 EQLKDRQSGDDEAMALDETFCTALEYGLAPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAM 433

Query: 349 QSNQ 352
           +  +
Sbjct: 434 KPQE 437


>gi|147798996|emb|CAN72569.1| hypothetical protein VITISV_036995 [Vitis vinifera]
          Length = 601

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 101/391 (25%), Positives = 163/391 (41%), Gaps = 45/391 (11%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR  I S++R     + F+E+++ 
Sbjct: 217 LLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADIFRKRAKIVSAIRRTVESSGFVEVETP 276

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + + + LYL+ + E   K++L  G EK++     +RN 
Sbjct: 277 VLQGAAGGA-EARPFVT---YHNSLGRDLYLRIATELHLKRMLVGGFEKVYEMGRIFRNE 332

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  YE +M     I+ +CA  V  +    +Q           
Sbjct: 333 GISTRHNPEFTTIEMYEAYSDYESMMNMAEEIVTQCALAVCGKLTIDYQGTEICLERPWR 392

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR----VAHDDTWSDIFSRIL 222
             T+         ID      +        L         +    +    +   + + + 
Sbjct: 393 RETMLNLVKEATGIDFNELXXDIKVAKEVALRALGIGHDSKDKSSIEACTSVGHVLNEVF 452

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +EP   +   T +  YP   S LA  +      T+RFEL+ C  EL NA  EL DP+
Sbjct: 453 EIVVEPQ--LIQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRELANAFSELTDPM 510

Query: 283 EQRHRFEKEMQ---EKKKI---------------YNETYP--IDEDFLACLT-EMPQSSG 321
           +QR R E++++   EK+                  +E+Y   +D+DFL  L   MP +SG
Sbjct: 511 DQRGRLEEQVRQHNEKRAAVVSEPDHAEVKTTESEDESYEVTLDDDFLTALEYGMPPASG 570

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           + +G DRLVML+T + +I +VI  P  +  Q
Sbjct: 571 MGLGVDRLVMLLTNSASIRDVIAFPVLKVQQ 601


>gi|21228018|ref|NP_633940.1| lysyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|39932430|sp|Q8PVP6|SYK2_METMA RecName: Full=Lysyl-tRNA synthetase 2; AltName: Full=Lysine--tRNA
           ligase 2; Short=LysRS 2
 gi|20906448|gb|AAM31612.1| Lysyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 511

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 159/364 (43%), Gaps = 29/364 (7%)

Query: 4   IPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +    +D    YR+R              + R+ + S +R +  + +F+E ++  LQ
Sbjct: 160 LPEKFHGLKDVETRYRKRYLDLIVNAEKREIFVMRSKLISEIRRFLTDREFLEFETPILQ 219

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G   + R F+T     + + + L+L+ +PE   K+L+  G EK+F     +RN +  
Sbjct: 220 TVYGGA-NARPFTT---FHNCLGQNLFLRIAPELYLKRLVVGGYEKVFEICKNFRNEDID 275

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYIT 169
             H PEFTM+E Y A+  Y  +M    +++                    N  S  + I+
Sbjct: 276 TTHNPEFTMIEVYEAYRDYNDMMDLTESLVSELVFKLTGSYEVQMGEKTINLRSPWKRIS 335

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEKIEP 228
           + +A   YA +D+              L   A +  I       +  +  + +    +E 
Sbjct: 336 MEDALKEYAGLDIFAHS-------IEDLKKIAIENRIEDYEKAKSHGEFLALLFEGLVED 388

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S LA  +     F +RFEL+    EL N   EL DP+EQ  RF
Sbjct: 389 K--LIDPTFIYDFPVENSPLAKNHREKAGFVERFELFLNGWELANGYSELNDPLEQEKRF 446

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E++ +++K    E   +D DF+  L   +P + G+ +G DRL M+++G  +I EVI  P 
Sbjct: 447 EEQDKKRKLGDLEAQTVDYDFINALGYGLPPTGGMGLGIDRLTMILSGLESIKEVILFPQ 506

Query: 348 SQSN 351
            +  
Sbjct: 507 MKRE 510


>gi|322694644|gb|EFY86468.1| lysyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 567

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 84/371 (22%), Positives = 146/371 (39%), Gaps = 26/371 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIP   +   N +  +R+R              + R  + S +R +F E  F+ + + 
Sbjct: 203 LHQIPDDHYGFKNPETRFRQRYLDLMMNEKSRQIFITRAKVDSYIRRWFDERDFVSVQTP 262

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F T     + +   ++L+ +PE   K L+  G  +++     +RN 
Sbjct: 263 MLNPIAGGAT-ARPFITH---HNDLNMDMFLRVAPELYLKMLVVGGLNRVYEMGRQFRNE 318

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT LE+Y A+     LM     ++    +  +    +  +      +N N 
Sbjct: 319 SMDLTHNPEFTTLEFYMAYADVYDLMTMTEELVSGLVKHIHGSYKTVYHTIKGEEININW 378

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                 I +  A                 +           + G+  +   T + +   +
Sbjct: 379 EGPWRRIEMIPALEEAVGEKFPPADTLHTEEANQFFKKVLAKTGVECSPPLTNARMLDAL 438

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E +E        T +  +P   S LA      P   +RFE++    E+ NA  EL   
Sbjct: 439 VGEYLESQA--INPTFIIGHPKMMSPLAKDSRTTPGLCERFEVFVSTKEIVNAYTELNVA 496

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNIN 340
            EQR RFE++ ++K +  +E    DE F   L   +P + G  MG DR++M +T   +I 
Sbjct: 497 AEQRLRFEEQARQKSQGDDEAQMADETFCQALEHALPPTGGWGMGIDRMMMFLTDNYSIR 556

Query: 341 EVIWTPFSQSN 351
           EV+  P  +  
Sbjct: 557 EVLAFPTMKPE 567


>gi|325191469|emb|CCA26242.1| lysyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 536

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 95/378 (25%), Positives = 154/378 (40%), Gaps = 34/378 (8%)

Query: 2   HQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
              P+  +   N D  +R R                R  +  S+R Y     F+E+++  
Sbjct: 155 QPFPNDKYGIKNPDIRFRMRYLDLLVNRDVRSIFETRAKVVRSIRNYLESRGFLEVETPM 214

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L  S G  T    F T+      +   LY++ +PE   K+L+  G  ++F     +RN  
Sbjct: 215 LFASAGGAT-AEPFVTKSR---ALGNDLYIRIAPELFLKQLVIGGFNRVFEIGKVFRNEG 270

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-----------SFQNV 157
               H PEFT+ E+Y+A+  YE LM+    ++    +                  + ++V
Sbjct: 271 IDATHNPEFTICEFYQAYADYETLMQTAEEMLSEIVKSVTGTAILKFPASAECDANEESV 330

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +       +++     +          D         L       GI      T   +
Sbjct: 331 EIDFTPPFRRLSICPTLEKALG---EPLPDLESDCAAQKLLNHCHTHGINCPQPHTVPRL 387

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             R++   IEP       T +  +P   S LA  +      T+RFEL+    ELCNA  E
Sbjct: 388 LDRLIGHFIEPMCIH--PTFVYNHPKCMSPLAKDHRQFKGLTERFELFVAGKELCNAYTE 445

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DP  QR RFE +++ K++   E + +DED+   L   +P + G  +G DRLVML+TG 
Sbjct: 446 LNDPDIQRERFEAQLENKERGDREAHQMDEDYCKALEYGLPPTGGFGIGIDRLVMLLTGK 505

Query: 337 NNINEVIWTPFSQSNQEE 354
           ++I E I  P  +  + E
Sbjct: 506 HHIRESILFPAMRPIETE 523


>gi|282854731|ref|ZP_06264066.1| lysine--tRNA ligase [Propionibacterium acnes J139]
 gi|282582313|gb|EFB87695.1| lysine--tRNA ligase [Propionibacterium acnes J139]
          Length = 1109

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 750  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 809

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 810  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 865

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 866  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 925

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 926  ANDWHVITVNEGISRGLGEEVTADTPKETLISYANKLGIATLPRWSRGDVILELHEHLSE 985

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 986  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1043

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1044 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1102

Query: 347  FSQSN 351
              +  
Sbjct: 1103 LVRPR 1107


>gi|108709561|gb|ABF97356.1| Lysyl-tRNA synthetase, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 595

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 82/363 (22%), Positives = 154/363 (42%), Gaps = 35/363 (9%)

Query: 9   WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R+ + S +R++     F+E+++  +    G   
Sbjct: 247 LRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMMNMIAGGAA 306

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LY++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 307 -ARPFVTH---HNELNMRLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 362

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A+  Y  L++    ++    +          +        +  +       I 
Sbjct: 363 TTCEFYMAYADYNDLIELTETMLSGMVKELTGGYKIKYHANGVEKPPIEIDFTPPFRKID 422

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E     A +++   L + +      L     +  ++     T + +  +     + P 
Sbjct: 423 MIEELEAMAKLNIPKDLSSDEAN--KYLIDACAKYDVKCPPPQTTTRLLDK--ETCVNPT 478

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             IN       +P   S LA  + + P  T+RFEL+    E+CNA  EL DP+ QR RFE
Sbjct: 479 FIIN-------HPEIMSPLAKWHRSRPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFE 531

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +++++++   +E   +DE F   L   +P + G  +G DRL ML+T + NI EV+  P  
Sbjct: 532 EQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAM 591

Query: 349 QSN 351
           +  
Sbjct: 592 KPQ 594


>gi|328869079|gb|EGG17457.1| leucyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 587

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 159/368 (43%), Gaps = 26/368 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR------------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  IP +   N+D  YR+R               + R+ + S LR Y VE  F+E+D+  
Sbjct: 222 LKPIPLR-LINKDTRYRKRHLDFLVNGHKIRDAFIVRSRMISFLRNYLVERGFLEVDTPV 280

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L  + G     + F T     + +   L+L+ SPE   K+L+ +G +++F     +RN  
Sbjct: 281 LSTNVGGAM-AKPFRTHS---NALDLDLFLRISPELYLKQLVISGFDRVFEIGKQFRNEG 336

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF----QNVNCNPFSE 164
               H PEFT  E Y+A+  Y  +M    ++I                   ++  +    
Sbjct: 337 VDLTHNPEFTTCELYQAYGDYHTMMALTEDLISKMVYDITGSYRVPLPADNDIEIDFTPP 396

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
              +         +   L   L + D      L    Q+  +RV+   T + I   +   
Sbjct: 397 FRRLHFIPKIEELSGEKLPEDLMSYDNLPH--LLRICQKHHVRVSEPHTPTRILDALASH 454

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +EP       T +  +P   S LA ++  + ++T+RFE++    EL NA  EL DP +Q
Sbjct: 455 YLEPLCV--QPTFIVDHPRAMSPLAKLHRDNSQWTERFEMFVGGKELVNAYSELNDPTDQ 512

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RF ++ +++    +E    DE +   L   +P + G  +G DRLVML+T   +I +VI
Sbjct: 513 RDRFIQQSKDRLTGDDEAQIYDEGYCNALDYGLPPTGGWGLGIDRLVMLLTNNVSIRDVI 572

Query: 344 WTPFSQSN 351
           + P  +  
Sbjct: 573 FFPTMKPK 580


>gi|322705588|gb|EFY97173.1| lysyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 622

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 83/371 (22%), Positives = 146/371 (39%), Gaps = 26/371 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIP   +   N +  +R+R              + R  + S +R +F E  F+ + + 
Sbjct: 258 LHQIPDDHYGFKNPETRFRQRYLDLMMNEKSRQIFITRAKVDSYIRRWFDERDFVSVQTP 317

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F T     + +   ++L+ +PE   K L+  G  +++     +RN 
Sbjct: 318 MLNPIAGGAT-ARPFVTH---HNDLNMDMFLRVAPELYLKMLVVGGLNRVYEMGRQFRNE 373

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT LE+Y A+     LM     ++    +  +    +  +      ++ N 
Sbjct: 374 SMDLTHNPEFTTLEFYMAYADVYDLMTMTEELVSGLVKHIHGSYKTTYHTIKGEEISINW 433

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                 I +  A                 +           + G+  +   T + +   +
Sbjct: 434 EGPWRRIEMIPALEEAVGEKFPPADTLHTEEANQFFKKVLAKTGVECSPPLTNARMLDAL 493

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E +E        T +  +P   S LA      P   +RFE++    E+ NA  EL   
Sbjct: 494 VGEYLESQA--INPTFIIGHPKMMSPLAKDSRTTPGLCERFEVFVSTKEIVNAYTELNVA 551

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNIN 340
            EQR RFE++ ++K +  +E    DE F   L   +P + G  MG DR++M +T   +I 
Sbjct: 552 AEQRLRFEEQARQKSQGDDEAQMADETFCQALEHALPPTGGWGMGIDRMMMFLTDNYSIR 611

Query: 341 EVIWTPFSQSN 351
           EV+  P  +  
Sbjct: 612 EVLAFPTMKPE 622


>gi|291238448|ref|XP_002739141.1| PREDICTED: lysyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 614

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 79/377 (20%), Positives = 146/377 (38%), Gaps = 32/377 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R  I + +R+Y  E  F+E+++ 
Sbjct: 228 LHMLPHLHFGLKDKETRFRQRYLDLIINDTVRQKFVTRARIVNYVRKYLDELGFLEVETP 287

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   L+++ +PE   K L+  G ++++     +RN 
Sbjct: 288 MMNMIAGGAT-AKPFVTH---HNDLDMDLFMRVAPELYHKMLVVGGIDRVYEIGRQFRNE 343

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---------VN 158
                H PEFT  E+Y A+  Y  LM+   ++I    +  +       +           
Sbjct: 344 SIDLTHNPEFTTCEFYMAYADYNDLMEMTESLIAGMVKSVHGSYKIVYHPEGQDGEEAWE 403

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +       I +     +   + L              L     + G+      + + + 
Sbjct: 404 VDFTPPFRRIRMIPDLEKELGVKLPAADSFDSPETNKFLDDLCVKLGVECTPPRSTARLL 463

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            ++ +     +                 A  + +      T+RFEL+ C  E+ NA  EL
Sbjct: 464 DKVGLYYSSWSGYSLRACSR-----SAQACEDAHRTIKGLTERFELFVCKKEVVNAYTEL 518

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP  QR  FE +   K    +E   +D+ F   L   +P + G  MG DRL M +T +N
Sbjct: 519 NDPAVQRKMFELQADAKAAGDDEAQGVDDGFCTALEYGLPPTGGWGMGIDRLTMFLTDSN 578

Query: 338 NINEVIWTPFSQSNQEE 354
           NI EV++ P  +  Q E
Sbjct: 579 NIKEVLFFPAMRPEQPE 595


>gi|284043972|ref|YP_003394312.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948193|gb|ADB50937.1| lysyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 1118

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 88/367 (23%), Positives = 152/367 (41%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P       + +  YRRR                R++  S++R    E  F E+++ 
Sbjct: 158 LRPLPDLRHGLTDPEARYRRRYVDLVVNPRARAVFAARSVAISAVRRVLTERGFREVETP 217

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   + L+ + E   K+LL  G +++F     +RN 
Sbjct: 218 VLLGQAGGAA-AKPFLTH---HNALDIEMSLRIALELPLKRLLVGGMDRVFEIGRVFRNE 273

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF-QNVNCNPFSEPE 166
                H PEFT+LE Y+A   Y  +M+    ++  AA  AN            +      
Sbjct: 274 GLDTRHNPEFTLLEAYQAFGDYSDMMELTETLVSEAALAANGTTVVRVGEREIDLRPPFR 333

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + +    +  +++  ++              A + G+          I + +  E  
Sbjct: 334 RARMTDLIKEHGGVEMHPSMPV------EEARAIADRFGVVWMDVWGSGKILAEVCDELC 387

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA  +  DP  T+RFEL     EL NA  EL DP++Q  
Sbjct: 388 ESK--LIEPTFVMDHPREISPLARAHRDDPTLTERFELVVAGRELANAYSELNDPVDQAA 445

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  E Q++     E  P+D+D++  L   +P + G+ +G DRL+ML+TG  +I +VI  
Sbjct: 446 RFAYEAQQQAGGDEEAEPVDDDYVQALEYGLPPTGGLGIGIDRLIMLITGVESIRDVILF 505

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 506 PTLRPQE 512


>gi|282856149|ref|ZP_06265432.1| lysine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585908|gb|EFB91193.1| lysine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 518

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 92/369 (24%), Positives = 159/369 (43%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR  I S+ R    ++  +E+++ 
Sbjct: 147 LRPLPEKWHGLTDLEIRYRKRYLDLIVNPEAREVFRKRAKIISTFRAVLEKHGTLEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L Y  G   + R F T     + +   +YL+ + E   K+L+     +++  +  +RN 
Sbjct: 207 VLSYLAGGA-NARPFIT---YHNALGANMYLRIATELYLKRLVVGMMGRVYEISKDFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPE 166
                H PEFTM+E Y  +  Y  +M     +IR +   AN         V  +      
Sbjct: 263 GMDLTHNPEFTMMEVYWPYADYVDMMNLTEELIRESCIAANGTPVIERNGVMLDFAKPFR 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ E       +D     D             A++  I +   ++   I +  +   +
Sbjct: 323 RATMVELVKENCGVDFADITD-------EEARDAARKNKIEITGHESRFKILTMFMEAFV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L+   P  P +T RFEL+ C  EL N   EL DPI+Q++
Sbjct: 376 EEK--LVQPTFVMGHPVEISPLSKKDPEHPDYTHRFELFCCGKELSNGYSELNDPIDQKN 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + Q+K +  +ET+P DEDF+  L   +P + G+ +G DR+VM +T   +I +VI+ 
Sbjct: 434 RFLDQTQKKTEGEDETHPFDEDFVEALEQGLPPTGGLGIGMDRVVMFLTNCRSIRDVIFF 493

Query: 346 PFSQSNQEE 354
           P  +   ++
Sbjct: 494 PTMKPVDKQ 502


>gi|257421557|ref|ZP_05598547.1| lysyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257163381|gb|EEU93341.1| lysyl-tRNA synthetase [Enterococcus faecalis X98]
          Length = 485

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/351 (27%), Positives = 160/351 (45%), Gaps = 27/351 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N ++E+++ 
Sbjct: 147 LRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDMDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ +M     IIR AA +V      ++     +  S  +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAVDLGSPFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +   +          A++  + +    T   I +      +
Sbjct: 323 RLHMVDAVKEQTGVDFWQEMTIEE------ARALAKEHNVEITDAMTVGHIINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EDT--LQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           RFE++ +E+++  +E + +DEDF+  L   +P + G+ +G DRLVML+T A
Sbjct: 435 RFEEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTDA 485


>gi|314982014|gb|EFT26107.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315090829|gb|EFT62805.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
          Length = 1081

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSACDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANDWHVITVNEGISRGLGEEVTADTPKETLISYANKLGIATLPRWSRGDVILELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|315095041|gb|EFT67017.1| lysyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|327328181|gb|EGE69950.1| lysine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 1081

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANDWHVITVNEGISRGLGEEVTADTPKETLISYANKLGIATLPRWSRGDVILELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|269115179|ref|YP_003302942.1| Lysyl-tRNA synthetase [Mycoplasma hominis]
 gi|290457660|sp|P46191|SYK_MYCHP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|268322804|emb|CAX37539.1| Lysyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 488

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 91/363 (25%), Positives = 159/363 (43%), Gaps = 27/363 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R+R              + R  I   +REYF    +IE+D+ 
Sbjct: 136 LKPLPDKFHGLVDPEERRRQRYVDLIMNEKTRNTFVMRTQIIKGIREYFDSLNYIEVDTP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + + +  YL+ + E   KKL+  G ++++     +RN 
Sbjct: 196 ILNPILGGAA-AKPFITFY---NALNRNFYLRIATELPLKKLIVGGLDRVYEIGRIFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+     +M+    + +      N K   F   +       + 
Sbjct: 252 GVDTTHNPEFTSIEFYEAYSDLWGMMERTEGVFKHLINKFNIKEVKFNGFDITFNFPFKR 311

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + +A +   N+D+          +   ++  A++ GI++     +  I + +  + +E
Sbjct: 312 VNMIDAISEKINVDIRK-------LNEEQMFELAKKHGIKIEKFFRYGHIINELFEKYVE 364

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA I P D RFT R EL+    E  N   EL DPI+Q  R
Sbjct: 365 ET--LIEPTFVYGHPIEISPLAAIDPDDKRFTLRAELFIGTKEFANMFTELNDPIDQLQR 422

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE ++ EK+    E   ID DF+  L   MP + G  +G DRL+ML+T  ++I +V+  P
Sbjct: 423 FENQLLEKENGNEEANEIDWDFVNALEYGMPPTGGSGIGIDRLIMLLTQNDSIRDVVLFP 482

Query: 347 FSQ 349
             +
Sbjct: 483 QLK 485


>gi|226362961|ref|YP_002780743.1| lysyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|296439701|sp|C1B7Z5|LYSX_RHOOB RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|226241450|dbj|BAH51798.1| putative lysyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 1114

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/372 (26%), Positives = 156/372 (41%), Gaps = 33/372 (8%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     + +   R+R             L  R+ +  SLR+      F+E+++ 
Sbjct: 756  LHPLPDKWKGLSDPETRVRQRYVDLAINTDARRLLEARSAVVKSLRDSLGGRGFLEVETP 815

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   +   F T +   +     LYL+ +PE   K+L  AG EK+F     +RN 
Sbjct: 816  ILQQVHGGA-NAAPFLTHI---NAYNLDLYLRIAPELYLKRLCVAGMEKVFEIGRVFRNE 871

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                 H PEFT+LE Y AH  YE++M  C  +I+ AA  A  +    +       V  + 
Sbjct: 872  GVDFKHNPEFTILEAYEAHSDYEKMMVLCRELIQTAAVAAYGREIIMRPGPDGTLVEVDI 931

Query: 162  FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
              E    T+ +A A    +D+        +     L     +  I          +   +
Sbjct: 932  SGEWPVKTMHQAVAEKLGVDVSP------ETPLAELQRLCDEHEIPYQSTWDAGAVAQEM 985

Query: 222  LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
                +E        T    +P   S L   +P  P    +++L A  +EL  A  EL DP
Sbjct: 986  YEHLVEDYTEF--PTFYTNFPTSMSPLTRPHPTIPGVAAKWDLVAWGVELGTAYSELTDP 1043

Query: 282  IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNIN 340
            ++QR+R  ++         E   +DEDFL  L   MP + G+ MG DR+VML+TG  +I 
Sbjct: 1044 VDQRNRLTEQSMLAAGGDEEAMELDEDFLQALEHAMPPTGGLGMGVDRVVMLITG-GSIR 1102

Query: 341  EVIWTPFSQSNQ 352
            E +  P ++  Q
Sbjct: 1103 ETLAFPLAKPRQ 1114


>gi|47458879|ref|YP_015741.1| lysyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614457|sp|Q6KIP6|SYK_MYCMO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|47458207|gb|AAT27530.1| lysyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 487

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 155/365 (42%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR R              L R+ I S +R+YF   +++E+D+ 
Sbjct: 136 LKVLPDKFHGLNDIEERYRHRYVDLIVNDDVRKTFLLRSRIISLIRKYFDNLEYLEVDTP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  +  + F T+    + +    YL+ + E   KKL+  G ++++     +RN 
Sbjct: 196 VLQPILGGAS-AKPFITKF---NALNSNFYLRIATELPLKKLVVGGFDRVYEIGRIFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+ + E +M    ++ +  A+  N K   F     +       
Sbjct: 252 GVDTTHNPEFTSIEYYEAYSNNEGMMNRTEDLFKFIAKELNLKTIFFNGYEIDLNKPFRR 311

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + EA      IDL                + A++  I+V        I + +    IE
Sbjct: 312 LNMVEALNEKLGIDLYKIS-------FEDAKVLAKKHHIKVESYFKIGHIINELFELFIE 364

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LAN    +P FT R EL+    E  N   EL DPI+Q  R
Sbjct: 365 K--DLIQPTFVYGHPIEISPLANKNKKNPNFTDRAELFIGTKEYANMFTELTDPIDQLER 422

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+ +  EK     E   ID DF+  L   +P + G  +G DRLVML T   +I EV+  P
Sbjct: 423 FKDQQNEKDNGNEEANEIDYDFVEALEYGLPPTGGCGIGIDRLVMLFTNNESIREVLLFP 482

Query: 347 FSQSN 351
             ++ 
Sbjct: 483 HLKNK 487


>gi|302799647|ref|XP_002981582.1| hypothetical protein SELMODRAFT_154531 [Selaginella moellendorffii]
 gi|300150748|gb|EFJ17397.1| hypothetical protein SELMODRAFT_154531 [Selaginella moellendorffii]
          Length = 507

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 95/390 (24%), Positives = 162/390 (41%), Gaps = 46/390 (11%)

Query: 3   QIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R                R  + S++R +  +  F+EI++  L
Sbjct: 124 PLPEKWHGLTDIEKRYRQRYLDMIMNPEVAGVFRARAKVVSAIRRFVEDLGFLEIETPIL 183

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q + G     R F T     + + + L+L+ + E   K++L  G E+++     +RN   
Sbjct: 184 QGAAGGA-DARPFITH---HNSLERDLFLRIATELHLKRMLVGGFERVYELGRIFRNEGI 239

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E Y+A+  Y  +M     ++ +CA  +       +Q             
Sbjct: 240 STRHNPEFTSIEIYQAYADYNDMMALAEELVTKCAEAIFGNAKLLYQGTEIALERPWRRA 299

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR----VAHDDTWSDIFSRILIE 224
           ++         ID      +        L   + +        +A+  T  ++ + +   
Sbjct: 300 SMQSLVQEATGIDFSAFGSDLSAAKSAALSALSPRKDESLQTVIANCATVGNVLNEVFEA 359

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +E    +   T +  +P   S LA  + + P   +RFELY C  EL NA  EL DPIEQ
Sbjct: 360 VVEKT--LIQPTFVTNHPVEVSPLAKAHRSFPGLVERFELYICGRELANAFSELTDPIEQ 417

Query: 285 RHRFEKEMQE------------KKKI---------YNETYPIDEDFLACLT-EMPQSSGI 322
           R RFE +++             + +           +    +DEDFL  L   MP ++G+
Sbjct: 418 RARFEAQIRAYNKQLEEAAAAARDRGESAVKQHKNDSYEVTLDEDFLTALEYGMPPTAGM 477

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +G DRLVML+T + +I +VI  P  +S Q
Sbjct: 478 GIGIDRLVMLLTDSPSIRDVIAFPVLKSQQ 507


>gi|229492238|ref|ZP_04386046.1| putative lysyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229320864|gb|EEN86677.1| putative lysyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 1118

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 151/366 (41%), Gaps = 21/366 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     + +   R+R             L  R+ +  SLR+      ++E+++ 
Sbjct: 760  LHPLPDKWKGLSDPETRVRQRYLDIALNPKARELLEARSAVVKSLRDSLGGRGYLEVETP 819

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   +   F T +   +     LYL+ +PE   K+L  AG EK+F     +RN 
Sbjct: 820  ILQQVHGGA-NAAPFLTHI---NAYNLDLYLRIAPELYLKRLCVAGMEKVFEIGRVFRNE 875

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y AH  YE +M+ C  +I+ AA  A  +    +        E + 
Sbjct: 876  GVDFKHNPEFTILEAYEAHSDYEGMMRMCRELIQAAAVAAFGREIIMRPGPDGELVEVDI 935

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +     +D   +     L        I          I   +    +E
Sbjct: 936  SGEWPVKTMHGAVAEKLGVDVSPETSLEDLQKLCDANEIPYQSSWDTGAIAQEMYEHLVE 995

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   ++++L A  +EL  A  EL DP++QR+R
Sbjct: 996  DYTEF--PTFYTNFPTSMSPLTRPHRSIPGVAEKWDLVAWGVELGTAYSELTDPVDQRNR 1053

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              ++         E   +DEDFL  L   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1054 LTEQSMLAAGGDPEAMELDEDFLQALEHAMPPTGGLGMGVDRIVMLITG-GSIRETLAFP 1112

Query: 347  FSQSNQ 352
             ++  Q
Sbjct: 1113 LAKPRQ 1118


>gi|314966150|gb|EFT10249.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
          Length = 1081

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANDWHVITVNEGISRGLGEEVTADTPKETLISYANKLGIATLPRWSRGDVILELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|126435577|ref|YP_001071268.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|296439667|sp|A3Q0V0|LYSX_MYCSJ RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|126235377|gb|ABN98777.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 1111

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     D   R              R  +  R+ +  ++R+      F+E+++ 
Sbjct: 754  LRPLPDKWKGLTDQEARVRARYVDLAVNTEARDLIRARSGVLHAIRDTLYHKGFLEVETP 813

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L   G E++F    A+RN 
Sbjct: 814  ILQQIHGGA-NARPFLTHI---NAYDLDLYLRIAPELYLKRLCVGGVERVFELGRAFRNE 869

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA  AN +    +  +       + 
Sbjct: 870  GVDFSHNPEFTLLEAYQAHADYHVWIDGCRELIQNAAMAANGEHVFLRPRDDGVLEPVDI 929

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +            +   L   A  AGI          +   +    +E
Sbjct: 930  SGPWTVKTVHDAVSEALGEHIDAATELPTLRKLADAAGIPYLTHWDEGAVVLEMYEHLVE 989

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + +     +R++L A  +EL  A  EL DP+EQR R
Sbjct: 990  DR--TEKPTFYKDFPTSVSPLTRPHRSIAGVAERWDLVAWGVELGTAYSELTDPVEQRRR 1047

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             + +         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1048 LQAQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFP 1106

Query: 347  FSQSN 351
             ++  
Sbjct: 1107 LARPR 1111


>gi|50843089|ref|YP_056316.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|50840691|gb|AAT83358.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202]
          Length = 1120

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 761  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 820

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 821  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 876

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 877  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 936

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 937  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 996

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 997  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1054

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1055 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1113

Query: 347  FSQSN 351
              +  
Sbjct: 1114 LVRPR 1118


>gi|315104379|gb|EFT76355.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
          Length = 1081

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANDWHVITVNEGISRGLGEEVTADTPKETLISYANKLGIATLPRWSRGDVILELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|225435776|ref|XP_002285737.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297746486|emb|CBI16542.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 101/391 (25%), Positives = 164/391 (41%), Gaps = 45/391 (11%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               KR  I S++R     + F+E+++ 
Sbjct: 208 LLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADIFRKRAKIVSAIRRTVESSGFVEVETP 267

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + + + LYL+ + E   K++L  G EK++     +RN 
Sbjct: 268 VLQGAAGGA-EARPFVT---YHNSLGRDLYLRIATELHLKRMLVGGFEKVYEMGRIFRNE 323

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  YE +M     I+ +CA  V  +    +Q           
Sbjct: 324 GISTRHNPEFTTIEMYEAYSDYESMMNMAEEIVTQCALAVCGKLTIDYQGTEICLERPWR 383

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR----VAHDDTWSDIFSRIL 222
             T+         ID     ++        L         +    +    +   + + + 
Sbjct: 384 RETMLNLVKEATGIDFNELDNDIKVAKEVALRALGIGHDSKDKSSIEACTSVGHVLNEVF 443

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +EP   +   T +  YP   S LA  +      T+RFEL+ C  EL NA  EL DP+
Sbjct: 444 EIVVEPQ--LIQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRELANAFSELTDPM 501

Query: 283 EQRHRFEKEMQ---EKKKI---------------YNETYP--IDEDFLACLT-EMPQSSG 321
           +QR R E++++   EK+                  +E+Y   +D+DFL  L   MP +SG
Sbjct: 502 DQRGRLEEQVRQHNEKRAAVVSEPDHAEVKTTESEDESYEVTLDDDFLTALEYGMPPASG 561

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           + +G DRLVML+T + +I +VI  P  +  Q
Sbjct: 562 MGLGVDRLVMLLTNSASIRDVIAFPVLKVQQ 592


>gi|156083889|ref|XP_001609428.1| lysyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796679|gb|EDO05860.1| lysyl-tRNA synthetase [Babesia bovis]
          Length = 548

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 83/371 (22%), Positives = 161/371 (43%), Gaps = 28/371 (7%)

Query: 1   MHQIPSQP-WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P +    + D  +R+R             +  R+ I S  R +F +  F+E+++ +
Sbjct: 146 LHMLPDKSGLKDPDTRFRQRYLDMIMNEDAMNVMFTRSRIVSYTRNFFSQRGFMEVETPT 205

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L    G  +  R F +     + +   L+L+ +PE   K ++  G EK+F     +RN  
Sbjct: 206 LNVQCGGAS-ARPFISH---HNDLDIDLFLRVAPELPLKMIVVGGFEKVFEIGKCFRNEG 261

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------CN 160
               H PEFT  E+Y A+  Y  L++     +       +       + +         +
Sbjct: 262 IDMTHNPEFTSCEFYWAYADYNDLIQLTEEYLSSLVLELHGGYTLPYHPDGPEGPEIILD 321

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                + I++ +A  +   ID     ++ +  ++       + AG+ +    T + +  +
Sbjct: 322 FKPPYDRISLIDALKQGTGIDFVPPYNSDENCEK--YREAIKAAGLEMPKPATPAKLLDK 379

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           ++   IE  +G N    +  +P     L+  + +     +RFEL+ C  EL NA  EL D
Sbjct: 380 LVGHYIEDRIG-NRPAFIMDHPQCMCPLSKWHRSKEDLCERFELFVCGRELINAYTELND 438

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P +QR   +++ + K    +E   +DE +   L   +P ++G  +G DRL M ++  NNI
Sbjct: 439 PFKQRECLQEQSKAKSMGDDEAQDVDEGYCVALEYGLPPTAGWGVGLDRLTMFMSDRNNI 498

Query: 340 NEVIWTPFSQS 350
            EV++ P  + 
Sbjct: 499 KEVLFFPTMKP 509


>gi|219852705|ref|YP_002467137.1| lysyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219546964|gb|ACL17414.1| lysyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 511

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 153/364 (42%), Gaps = 27/364 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R                R+ I S +R++  E  F+E ++ 
Sbjct: 139 LCPLPEKFHGLKDTETRYRQRYVDLIMNEKARETFRVRSRIISLIRQFLGERGFLEFETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +LQ   G   + R F+T     + + +  +L+ + E   K+LL  G EKIF     +RN 
Sbjct: 199 TLQPVYGGA-NARPFTT---YHNFLDQTFFLRIATELYLKRLLVGGFEKIFEIGKNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPE 166
           +    H PEFT++E Y A+  Y  +M      +       +     +F  V  +      
Sbjct: 255 DIDTSHNPEFTLIEIYEAYRDYNDMMDLMEEFLSSLVNAIHGCDQVTFDEVVISFAGPWR 314

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ EA   YA ID               L   A +  +           F  +  E  
Sbjct: 315 RITMEEAVREYAGID-------VLATSLEELQAFAIEHAVPEYEKAASPREFLVLFFEFF 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                I     +  +P   S LA  + +   FT+RFEL+   +E+ N   EL DPI+Q +
Sbjct: 368 AEKQLIQPT-FVHDFPIENSPLAKRHRSKEGFTERFELFINGMEIANGFSELNDPIDQMN 426

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R E + +++     E   +D DF+  L   MP + G+  G DR+VML+T   +I EVI  
Sbjct: 427 RLEAQDRKRLSGDLEAQMVDYDFINALGYGMPPTGGVGFGVDRVVMLLTNNTSIKEVILF 486

Query: 346 PFSQ 349
           P  +
Sbjct: 487 PSMK 490


>gi|332676013|gb|AEE72829.1| lysylphosphatidylglycerol biosynthesis bifunctional protein LysX
            [Propionibacterium acnes 266]
          Length = 1120

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 761  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 820

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 821  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 876

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 877  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 936

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 937  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 996

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 997  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1054

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1055 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1113

Query: 347  FSQSN 351
              +  
Sbjct: 1114 LVRPR 1118


>gi|314923836|gb|EFS87667.1| lysyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
          Length = 1081

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANDWHVITVNEGISRGLGEEVTADTPKETLISYANKLGIATLPRWSRGDVILELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|256618322|ref|ZP_05475168.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256597849|gb|EEU17025.1| lysyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
          Length = 484

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 97/350 (27%), Positives = 159/350 (45%), Gaps = 27/350 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N ++E+++ 
Sbjct: 147 LRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDMDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ +M     IIR AA +V      ++     +  S  +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAVDLGSPFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +   +          A++  + +    T   I +      +
Sbjct: 323 RLHMVDAVKEQTGVDFWQEMTIEE------ACALAKEHNVEITDAMTVGHIINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EDT--LQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           RFE++ +E+++  +E + +DEDF+  L   +P + G+ +G DRLVML+T 
Sbjct: 435 RFEEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVMLLTD 484


>gi|303289054|ref|XP_003063815.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454883|gb|EEH52188.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 692

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 91/393 (23%), Positives = 162/393 (41%), Gaps = 47/393 (11%)

Query: 1   MHQIP-SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P      +++  YR+R              + R+ I  S+R+Y  +  F+E+++  
Sbjct: 209 LHMLPGFSGLKDQETRYRKRFLDLIMNPEVRDIFITRSNIIRSIRKYLDDQDFVEVETPM 268

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +   PG  T  + F T     + +   LY++ +PE   K+L+  G ++++     +RN  
Sbjct: 269 MNMIPGGAT-AKPFITH---HNDLDMTLYMRIAPELFLKELVVGGMDRVYEIGRQFRNEG 324

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCN 160
               H PEFT  E+Y A+  YE LMK   +++               +        V  +
Sbjct: 325 IDMTHNPEFTTCEFYMAYADYEDLMKMTEDLVSGMVLRLKGSYKVMYHANGPDEPPVEID 384

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                +  ++     +  NI +   L++ +      L    Q+ G       T + +   
Sbjct: 385 FTPPFKRFSMVADLEKTLNIKIPMPLESDEAN--RYLKDTCQRLGSECQPPHTTARLLDT 442

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE----------------- 263
           ++ + +E          +  +P   S LA  +   P  T+RFE                 
Sbjct: 443 LVGDYLETQCVS--PAFICDHPKIMSPLAKYHRKLPDMTERFEARSISHWSPYDPVCVVN 500

Query: 264 -LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
            ++    ELCNA  EL DPI QR RF  + ++K    +E   +DE F   L   +P + G
Sbjct: 501 AMFVNKRELCNAYTELNDPIVQRERFADQAKQKGAGDDEAMTVDETFCEALEYGLPPTGG 560

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
             +G DRL ML+T   NI EV+  P  + + ++
Sbjct: 561 WGLGIDRLTMLLTDTANIKEVLLFPAMKPDDQQ 593


>gi|226303560|ref|YP_002763518.1| lysyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|296439700|sp|C0ZL89|LYSX_RHOE4 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|226182675|dbj|BAH30779.1| probable lysyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 1104

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 151/366 (41%), Gaps = 21/366 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     + +   R+R             L  R+ +  SLR+      ++E+++ 
Sbjct: 746  LHPLPDKWKGLSDPETRVRQRYLDIALNPKARELLEARSAVVKSLRDSLGGRGYLEVETP 805

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   +   F T +   +     LYL+ +PE   K+L  AG EK+F     +RN 
Sbjct: 806  ILQQVHGGA-NAAPFLTHI---NAYNLDLYLRIAPELYLKRLCVAGMEKVFEIGRVFRNE 861

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y AH  YE +M+ C  +I+ AA  A  +    +        E + 
Sbjct: 862  GVDFKHNPEFTILEAYEAHSDYEGMMRMCRELIQAAAVAAFGREIIMRPGPDGELVEVDI 921

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +     +D   +     L        I          I   +    +E
Sbjct: 922  SGEWPVKTMHGAVAEKLGVDVSPETSLEDLQKLCDANEIPYQSSWDTGAIAQEMYEHLVE 981

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   ++++L A  +EL  A  EL DP++QR+R
Sbjct: 982  DYTEF--PTFYTNFPTSMSPLTRPHRSIPGVAEKWDLVAWGVELGTAYSELTDPVDQRNR 1039

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              ++         E   +DEDFL  L   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1040 LTEQSMLAAGGDPEAMELDEDFLQALEHAMPPTGGLGMGVDRIVMLITG-GSIRETLAFP 1098

Query: 347  FSQSNQ 352
             ++  Q
Sbjct: 1099 LAKPRQ 1104


>gi|227496387|ref|ZP_03926675.1| possible lysyl-tRNA synthetase [Actinomyces urogenitalis DSM 15434]
 gi|226834072|gb|EEH66455.1| possible lysyl-tRNA synthetase [Actinomyces urogenitalis DSM 15434]
          Length = 457

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 83/371 (22%), Positives = 152/371 (40%), Gaps = 32/371 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     + +   R+R             L+ R+    ++R   ++  ++E+++ 
Sbjct: 100 LRPLPNKHRGLQDPEMRVRQRHLALIISSRDRRMLVARSHAIQAVRSTLLQRGYLEVETP 159

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T +   +     LYL+ +PE   K+L+ AG +++F    ++RN 
Sbjct: 160 MLHPVHGGA-NARPFRTHI---NAYDLDLYLRIAPELYLKRLMVAGADRVFEIGRSFRNE 215

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN-----VNCNPF 162
                H PEFTMLE Y+++  Y  + +   ++   AA+ A                 +  
Sbjct: 216 GADATHNPEFTMLEAYQSYADYTVMKEVVQDLAVHAAKAALGTTVIRGTVGGVVHEVDLA 275

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
           +    ++V +A A +    +  +           L   A +  +       W  +   + 
Sbjct: 276 APWRTVSVCDAVAEHLGEPVDAS------TSLGTLQAFADRLNLAYDPAWGWGTLVQHLY 329

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
               E        T    +PA  S L   + + P   +R++L     E+  A  EL+DP+
Sbjct: 330 EHLAEGTTA--QPTFFTDFPAETSPLTRPHRSLPLLAERWDLIIFGSEVGTAYSELVDPV 387

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
            QR R   +         E   +DE FL  L   MP + G+ +G DRLVM++TGA +I E
Sbjct: 388 LQRERLTAQSLAAAGGDPEAMELDEAFLQALEQGMPPTGGLGVGLDRLVMMLTGA-SIRE 446

Query: 342 VIWTPFSQSNQ 352
            I  P  +  +
Sbjct: 447 TITFPLVRPGK 457


>gi|327334150|gb|EGE75864.1| lysine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 1081

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|327457844|gb|EGF04499.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
          Length = 1081

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARGQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|42523785|ref|NP_969165.1| lysyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|39575992|emb|CAE80158.1| lysyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 504

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 160/364 (43%), Gaps = 29/364 (7%)

Query: 1   MHQIPSQPWWN-------RDFHYR------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +           R  H         R     R+ I   +R +  +  F+E+++ 
Sbjct: 152 IEPLPEKFHGVQDIEIKYRHRHLDLMTDADSRKVFETRSKIIKEVRRFLDDRGFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +LQ   G       F+T       +   LY++ SPE   K+L+  G EK++  +  +RN 
Sbjct: 212 TLQPVYGGAA-ATPFTTH---HKALDMKLYMRISPELYLKRLIVGGFEKVYEISKNFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEF +LE+Y A+  Y   MK    +I   A ++      ++Q    +      
Sbjct: 268 GIDRTHNPEFALLEFYEAYTDYNYQMKQFEELISSLALKITGSMKVTYQGKEIDFTPPWR 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV E    YA ID       PD+     ++   ++ G  +       ++   +     
Sbjct: 328 RLTVHEGVKEYAGID-------PDKATDQEIFQAIRKNGGDIDEPGKRGEMIMELFELTA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  +P   S L  I+  D R  +RFE +A  +E+ NA  EL DP +Q  
Sbjct: 381 EQH--LVQPTFVMDHPVEISPLTKIHRRDSRLVERFEPFAACMEIGNAYSELNDPEDQLA 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R +++   + K   E +P+DEDFL  +   MP + G+ +G +R+VML+T   +I ++I+ 
Sbjct: 439 RLKEQEANRAK-DEEAHPMDEDFLLAIDAGMPPTGGVGIGIERIVMLLTDRPSIRDIIFF 497

Query: 346 PFSQ 349
           P  +
Sbjct: 498 PTMR 501


>gi|315079610|gb|EFT51603.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
          Length = 1081

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|313816675|gb|EFS54389.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|315099121|gb|EFT71097.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
          Length = 1081

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|124513716|ref|XP_001350214.1| lysine-tRNA ligase [Plasmodium falciparum 3D7]
 gi|23615631|emb|CAD52623.1| lysine-tRNA ligase [Plasmodium falciparum 3D7]
          Length = 583

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 82/371 (22%), Positives = 153/371 (41%), Gaps = 28/371 (7%)

Query: 1   MHQIPSQP-WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P +    + +  YR+R              + R  I + LR +  E  F E+++  
Sbjct: 218 LHMLPMKYGLKDTEIRYRQRYLDLLINESSRHTFVTRTKIINFLRNFLNERGFFEVETPM 277

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G   + R F T     + +   LYL+ + E   K L+  G +K++     +RN  
Sbjct: 278 MNLIAGGA-NARPFITH---HNDLDLDLYLRIATELPLKMLIVGGIDKVYEIGKVFRNEG 333

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF--------SFQNVNCN 160
               H PEFT  E+Y A+  Y  L+K   +                        Q +  +
Sbjct: 334 IDNTHNPEFTSCEFYWAYADYNDLIKWSEDFFSQLVYHLFGTYKISYNKDGPENQPIEID 393

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  +++ E   +  N  L    D+ +  ++  +    ++  I + +  T + +  +
Sbjct: 394 FTPPYPKVSIVEEIEKVTNTILEQPFDSNETIEK--MINIIKEHKIELPNPPTAAKLLDQ 451

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +    IE         I+  +P   S LA  +   P  T+R E++ C  E+ NA  EL D
Sbjct: 452 LASHFIENKYNDKPFFIV-EHPQIMSPLAKYHRTKPGLTERLEMFICGKEVLNAYTELND 510

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P +Q+  F+ + ++++K   E   +D  F   L   +P + G+ +G DR+ M +T  N+I
Sbjct: 511 PFKQKECFKLQQKDREKGDTEAAQLDSAFCTSLEYGLPPTGGLGLGIDRITMFLTNKNSI 570

Query: 340 NEVIWTPFSQS 350
            +VI  P  + 
Sbjct: 571 KDVILFPTMRP 581


>gi|314914790|gb|EFS78621.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
          Length = 1081

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|295131136|ref|YP_003581799.1| lysine--tRNA ligase [Propionibacterium acnes SK137]
 gi|291375349|gb|ADD99203.1| lysine--tRNA ligase [Propionibacterium acnes SK137]
 gi|313763493|gb|EFS34857.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313793883|gb|EFS41907.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313801274|gb|EFS42525.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313813494|gb|EFS51208.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313840003|gb|EFS77717.1| lysyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314920700|gb|EFS84531.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314930579|gb|EFS94410.1| lysyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314968411|gb|EFT12509.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|315081159|gb|EFT53135.1| lysyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315100396|gb|EFT72372.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315106910|gb|EFT78886.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315109100|gb|EFT81076.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327452090|gb|EGE98744.1| lysyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|327454872|gb|EGF01527.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|328755296|gb|EGF68912.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
          Length = 1081

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|314954465|gb|EFS98871.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
          Length = 1081

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|289426405|ref|ZP_06428148.1| lysine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289153133|gb|EFD01851.1| lysine--tRNA ligase [Propionibacterium acnes SK187]
          Length = 1081

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|289428675|ref|ZP_06430358.1| lysine--tRNA ligase [Propionibacterium acnes J165]
 gi|289158073|gb|EFD06293.1| lysine--tRNA ligase [Propionibacterium acnes J165]
 gi|313808046|gb|EFS46527.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313819615|gb|EFS57329.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313822061|gb|EFS59775.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313823704|gb|EFS61418.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313826027|gb|EFS63741.1| lysyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|314924758|gb|EFS88589.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314961955|gb|EFT06056.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314978937|gb|EFT23031.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|315083622|gb|EFT55598.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315087044|gb|EFT59020.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315089219|gb|EFT61195.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|327329638|gb|EGE71394.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327446323|gb|EGE92977.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|328752465|gb|EGF66081.1| lysyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
          Length = 1081

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|224006297|ref|XP_002292109.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220972628|gb|EED90960.1| lysyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 610

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 158/376 (42%), Gaps = 27/376 (7%)

Query: 1   MHQIPSQ---PWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEI 44
           +H +P            +  YR+R               +R  + + +R+YF +  F+E+
Sbjct: 216 LHMLPKAVGGHGGMTNMETRYRQRYLDLIVNSDVRTVFERRAQVINYIRKYFNDRHFLEV 275

Query: 45  DSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
           ++  +   PG     R F T     + +   ++++ +PE   K L+  G ++++     +
Sbjct: 276 ETPMMNMIPGGAV-ARPFVT---FHNDLSLEMFMRIAPELYLKMLVIGGLDRVYEIGRQF 331

Query: 105 RNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFS 163
           RN      H PEFT  E Y A+  Y  LM     ++    +         +Q        
Sbjct: 332 RNEGIDLTHNPEFTTCESYEAYADYNDLMDMTEEMLSGMVKEITGGYKIKYQPKPNTEEV 391

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHL---LYLQAQQAGIRVAHDDTWSDIFSR 220
           E ++    +  +    I+       P+  D  +   L L  ++  +      T + +   
Sbjct: 392 EIDFTPPFKRISMIEGIEEKIGQKLPELDDPKIEVKLELILEKFDLECPPPHTTARLLDT 451

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           ++ E +E N  I   T +  +P   S LA  +      T+RFEL+ C  EL NA  EL +
Sbjct: 452 LVGEFLEDN--IIHPTFITEHPQIMSPLAKNHRDKKGLTERFELFVCGRELANAYTELNN 509

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P+ Q  RF ++  + K+  +E   +D+ F+  L   +P + G  +G DRL M ++  NNI
Sbjct: 510 PVVQYQRFLEQAMQGKEGDDEAMIMDDSFITALEHGLPPTGGWGLGVDRLTMFLSNKNNI 569

Query: 340 NEVIWTPFSQSNQEEI 355
            EV+  P  +   E++
Sbjct: 570 KEVLLFPAMKPTDEQL 585


>gi|314963762|gb|EFT07862.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
          Length = 1081

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|302407898|ref|XP_003001784.1| lysyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261359505|gb|EEY21933.1| lysyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 606

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 81/369 (21%), Positives = 155/369 (42%), Gaps = 26/369 (7%)

Query: 1   MHQIPSQPWWNRD-------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P + +  +D              + R R  L+ R+ + + +R Y  E  F+E+++ 
Sbjct: 216 LHNLPDEYYGLKDQEERFRKRYLDLMMNDRSRNTLITRSKMVTYIRRYLDERDFVEVETP 275

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   ++++ +PE   K+L+  G  +++     +RN 
Sbjct: 276 QMNAIAGGAT-AKPFIT---YHNELDMTMFMRIAPELYLKELVVGGLNRVYEIGRQFRNE 331

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PEFT  E+Y A+     LM    +++    +       +  +         N 
Sbjct: 332 GLDLTHNPEFTTCEFYEAYADVYDLMNTTEDLVSGLVKHLTGGYKTQFHTQTGEVYEVNW 391

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
               +   +     +        +           L    ++  +  +   T + +  ++
Sbjct: 392 EKPWKRFEMIPELEKQTGEKFPPSDQLHTAETNEFLRGVLKKMKLDCSPPLTNARMIDKL 451

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IE        + +  +P   S LA  + + P   +RFE + C  E+ NA  EL DP
Sbjct: 452 VGEYIEEQCVS--PSFIFGHPQVMSPLAKYHRSMPGLCERFEAFVCKKEIVNAYTELNDP 509

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   IDE+F   L   +P ++G  MG DR+VM +T    I 
Sbjct: 510 FDQRLRFEEQARQKDQGDDEAQMIDENFCMSLEYGLPPTAGWGMGIDRMVMFLTDHYTIR 569

Query: 341 EVIWTPFSQ 349
           EV+  PF +
Sbjct: 570 EVLAFPFMK 578


>gi|314986621|gb|EFT30713.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990977|gb|EFT35068.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
          Length = 1081

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|254383488|ref|ZP_04998839.1| lysyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194342384|gb|EDX23350.1| lysyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 1100

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 92/363 (25%), Positives = 149/363 (41%), Gaps = 21/363 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     + +   RRR             +  R+    +LR+  ++  ++E+++ 
Sbjct: 743  LRPLPDKRKGLADPEARVRRRYLDLVASPEARDVVRARSAAVQALRQGLLDRGYLEVETP 802

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L   G EK+F     +RN 
Sbjct: 803  MLQQIHGGA-NARPFRTHI---NAYDLDLYLRIAPELYLKRLCVGGMEKVFEMGRTFRNE 858

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A   Y+ ++     +I+ AA  A     + +          + 
Sbjct: 859  GVSYKHNPEFTMLEAYQAFADYDVMLDLTRELIQGAATAAYGSPIAHKAGPDGKLVVHDI 918

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              +      Y  I      +        +L     +AG+    +DT  D+   +    +E
Sbjct: 919  SGIWPVKTMYGAIGEALGEEVDADTAEPVLRRLCDRAGVPHGPEDTRGDVVLEMYERLVE 978

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                +   T    +P   S L   +  DPR  +R++L A   EL  A  EL DP+EQR R
Sbjct: 979  ERTKL--PTFYKDFPTDVSPLTRQHRRDPRLAERWDLVAFGTELGTAYSELTDPVEQRRR 1036

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               +         E   +D DFL  L   MP + G+ +G DRLVM +TG   I E +  P
Sbjct: 1037 LTAQSLLAAGGDPEAMELDNDFLDALEYAMPPTGGLGIGVDRLVMFLTGL-TIRETLPFP 1095

Query: 347  FSQ 349
              +
Sbjct: 1096 LVR 1098


>gi|20089645|ref|NP_615720.1| lysyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|39932434|sp|Q8TSN5|SYK2_METAC RecName: Full=Lysyl-tRNA synthetase 2; AltName: Full=Lysine--tRNA
           ligase 2; Short=LysRS 2
 gi|19914568|gb|AAM04200.1| lysyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 511

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 157/364 (43%), Gaps = 29/364 (7%)

Query: 4   IPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +    +D    YR+R              + R+ + S +R +  + +F+E ++  LQ
Sbjct: 160 LPEKFHGLKDVETRYRKRYLDLIVNAEKREIFVMRSKLISEIRRFLADREFLEFETPILQ 219

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G   + R F T     + + + L+L+ +PE   K+L+  G EK+F  +  +RN +  
Sbjct: 220 TVYGGA-NARPFKT---FHNCLGQNLFLRIAPELYLKRLVVGGYEKVFEISKNFRNEDID 275

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYIT 169
             H PEFTM+E Y A+  Y  +M     +I                    N  S  + I+
Sbjct: 276 TTHNPEFTMIEVYEAYRDYNDMMDLTEALISELVFRLTGGYEVKMGENTINLRSPWKRIS 335

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEKIEP 228
           +  A   YA +D+ +            L   A Q  I       +  +  + +    +E 
Sbjct: 336 MEGALKEYAGLDVFSHS-------LEELKQIAIQNRIEDYEKAKSHGEFLALLFEGLVED 388

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S LA  +     F +RFEL+    EL N   EL DP+EQ  RF
Sbjct: 389 K--LVNPTFIYDFPVENSPLAKNHREKEGFVERFELFLNGWELANGYSELNDPLEQEKRF 446

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E++ +++K    E   +D DF+  L   +P + G+ +G DRL M++ G  +I EVI  P 
Sbjct: 447 EEQDKKRKLGDLEAQTVDYDFINALGYGLPPTGGMGLGIDRLTMILAGLESIKEVILFPQ 506

Query: 348 SQSN 351
            +  
Sbjct: 507 MKRE 510


>gi|72163280|ref|YP_290937.1| lysyl-tRNA synthetase [Thermobifida fusca YX]
 gi|71917012|gb|AAZ56914.1| lysyl-tRNA synthetase, class-2 [Thermobifida fusca YX]
          Length = 496

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 91/367 (24%), Positives = 154/367 (41%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R+R             +++R     +LR+      +IE+++ 
Sbjct: 142 LRPLPDKHKGLTDPEARVRQRYVDLIVNPESREMVMRRARTVRALRDGLHNRGYIEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  T  R F T +   +     LYL+ +PE   K+++  G EK+F     +RN 
Sbjct: 202 MLQQVHGGAT-ARPFVTHI---NAYDLDLYLRIAPELYLKRMVVGGVEKVFEINRNFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  +      +I+ AA       +    +   +   E  
Sbjct: 258 GADSTHNPEFTMLEFYQAYADYNVMADITRELIQEAAVAVFGSTVVQRGDTEVDLGGEWP 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+  A +     ++        +     L   A   G+    +     +   +  E +
Sbjct: 318 QITLYGAVSEALGEEVTP------RTPVETLRKLADARGVEWNPEWGPGKLVEHLFEELV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           + +  +   T +  YP   S L   +  DP  T++++L    +EL     EL+DP+EQR 
Sbjct: 372 QDS--LVQPTFVRDYPLETSPLTRQHREDPLLTEKWDLIGFGMELGTGYSELIDPVEQRR 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R  ++         E   +DEDFL  L   MP + G+ +G DRL+M  TG  NI E I  
Sbjct: 430 RLTEQSLLAAGGDPEAMQLDEDFLRALEYAMPPTGGVGVGVDRLLMAFTG-KNIRETILF 488

Query: 346 PFSQSNQ 352
           P  +  Q
Sbjct: 489 PLVRQEQ 495


>gi|119488467|ref|ZP_01621640.1| lysyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119455278|gb|EAW36418.1| lysyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 524

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 95/384 (24%), Positives = 160/384 (41%), Gaps = 45/384 (11%)

Query: 3   QIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSL 49
             P   +   + +   R R                R+ I  S+R Y    +F EI++  L
Sbjct: 153 PFPDSYYGVNDPEICRRHRELGLVSSPESFATFKLRSRIIKSMRTYLWNAEFDEIETPVL 212

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G     R F T     + +   LYL+ + E   K+ +  G E++F     +RN   
Sbjct: 213 QAIYGGAA-ARPFITH---HNALDIDLYLRIATELFLKRAVCGGFERVFEIGRVFRNEGI 268

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE----- 164
              H PEFT +E Y+A+  Y  LM    ++I    +     +     ++     E     
Sbjct: 269 DSTHNPEFTSVEAYQAYADYFDLMTLVEDLICVVTKDVLGDVTEVDYLDDKISLERKYDY 328

Query: 165 -----------PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--D 211
                       +  T+ EA      +D        D  +      +A++ G+  +    
Sbjct: 329 TDIYPSFTGKHWKVQTMVEAVREKTGLDF-------DTLELGEAIKEAEKLGLNPSKLNT 381

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
            T   +   +  +K+E    +   T +  +P   S LA  + + P F +RFEL+    E 
Sbjct: 382 QTLGYLLYAVFDQKVEST--LMEPTFIIDFPVEVSPLAKRHRSKPGFVERFELFIHGTEY 439

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
            N   EL DP++QR RFE+++ +K     E +P+DEDF+  L+  MP   G+ +G DR++
Sbjct: 440 SNGFSELNDPVDQRKRFEEQLAQKNAGDEEAHPMDEDFIQALSLGMPTCGGMGIGVDRVI 499

Query: 331 MLVTGANNINEVIWTPFSQSNQEE 354
           ML+T   +I +VI  P  +S  +E
Sbjct: 500 MLLTNTQSIRDVIMFPTMRSMLKE 523


>gi|320335053|ref|YP_004171764.1| Lysyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319756342|gb|ADV68099.1| Lysyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 507

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 151/366 (41%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +PS+     + +   RRR              L R+ +   +R    +  F+E++  
Sbjct: 145 LHPLPSKFHGLQDEELRARRRYLDLMVTEGAREKFLARSRMIRFIRNTLDQQGFVEVEGP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +LQ + G     R F T     + +     L+ S E   K+LL  G EK++     +RN 
Sbjct: 205 TLQVTAGGA-EARPFMTH---HNALSHDFKLRISLELYLKRLLVGGFEKVYEIGRVYRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y  + K   +++   A   +    F +     +      
Sbjct: 261 GIDRTHNPEFTMLELYWAYVDYSDIAKLVEDLLSGLAREVHGSYTFEYGGRTLDFTPPFA 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +           +       + D  D   L     +             +  ++  E +
Sbjct: 321 RVDYL------GGLREHVPDLDFDPLDFEKLRAYCDERHPEWRK-VPDYKLLDKLFGEYV 373

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  +P   S LA  +      T+RFE++    EL NA  EL D ++QR 
Sbjct: 374 EP--LLTNPTFVMDHPVVISPLAKKHREREGVTERFEVFCSGFELANAFSELNDALDQRE 431

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + Q +    +E +  DEDFL  L   MP + G+ +G DRL ML+TG+++I +V+  
Sbjct: 432 RFEAQSQRRDAGDDEAHAQDEDFLLALEYGMPPAGGLGIGIDRLAMLLTGSDSIRDVLLF 491

Query: 346 PFSQSN 351
           P  +  
Sbjct: 492 PLLRPE 497


>gi|314957544|gb|EFT01647.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
          Length = 1081

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITLNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|314984274|gb|EFT28366.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
          Length = 1081

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLLGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|328758223|gb|EGF71839.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
          Length = 1081

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|39940548|ref|XP_359811.1| hypothetical protein MGG_04966 [Magnaporthe oryzae 70-15]
 gi|145010799|gb|EDJ95455.1| hypothetical protein MGG_04966 [Magnaporthe oryzae 70-15]
          Length = 615

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 85/372 (22%), Positives = 154/372 (41%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRD------FHY-------RRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +     D        Y       + R  L +R+ I   +R++F + +FIE+++ 
Sbjct: 227 LHLLPGERAGFTDGEKRFRMRYLDFMFNDKSREVLWQRSRIVKYIRDFFHDRRFIEVETP 286

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T +  F T     +     ++++ +PE   K L+  G  K+F     +RN 
Sbjct: 287 MMTSIAGGATAL-PFVTH---HNEYDLDMFMRIAPELYLKMLVVGGYNKVFEIGKNFRNE 342

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ------KIFSFQNVNCNP 161
                H PEFT +E Y A+     +M     ++    +             + +    N 
Sbjct: 343 GCDLTHNPEFTTIEAYAAYYDMYDVMDYTEELVSGLVKHLTGGYETKFTTQTGETYEVNW 402

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
               + + +     R          +         L    ++  I      T + +  ++
Sbjct: 403 ARPWKRVKIMPELERLTGKKFPPYSELHTDETNQFLRDLLKEKNIECTPPLTNARMLDKL 462

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E +E        T L  +P   S LA  +  +   ++RFE + C  E+CNA  EL +P
Sbjct: 463 IGEYLEETC--INPTFLMEHPQLMSPLAKYHRTEKGISERFEGFVCKKEICNAYTELNNP 520

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   IDE+FL  L   +P ++G  +G DRL M +T    I 
Sbjct: 521 FDQRLRFEEQARQKAQGDDEAQMIDENFLRSLEYGLPPTAGWGLGIDRLCMFLTNNATIR 580

Query: 341 EVIWTPFSQSNQ 352
           EV+  PF +  +
Sbjct: 581 EVLAFPFMRDEK 592


>gi|313811482|gb|EFS49196.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313831223|gb|EFS68937.1| lysyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834245|gb|EFS71959.1| lysyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314974099|gb|EFT18195.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976611|gb|EFT20706.1| lysyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|315095443|gb|EFT67419.1| lysyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327328499|gb|EGE70261.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327444286|gb|EGE90940.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327444834|gb|EGE91488.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328759934|gb|EGF73518.1| lysine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 1081

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLLGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|297834174|ref|XP_002884969.1| hypothetical protein ARALYDRAFT_478735 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330809|gb|EFH61228.1| hypothetical protein ARALYDRAFT_478735 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 603

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 95/391 (24%), Positives = 162/391 (41%), Gaps = 45/391 (11%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I S +R+      ++E+++ 
Sbjct: 219 LLPLPDKYHGLTDIDKRYRQRYVDMIANPEVADVFRRRAKIVSEIRKTVESFGYLEVETP 278

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + + + LYL+ + E   K++L  G EK++     +RN 
Sbjct: 279 VLQGAAGGA-EARPFVT---FHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNE 334

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y+ +M     I+   +   N K    +Q           
Sbjct: 335 GISTRHNPEFTTIEMYEAYSDYQSMMDMAELIVTQCSMAVNGKLTIDYQGTEICLERPWR 394

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD----TWSDIFSRIL 222
             T+         I+     ++       +L         +         +   + + + 
Sbjct: 395 RETMHNLVKEITGINFSELGEDLGNAKDTVLLALQDVLEPKDKSGIGACSSLGHLLNEVF 454

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +EP   +   T +  YP   S LA  + ++   T+RFEL+ C  E+ NA  EL DP+
Sbjct: 455 EVVVEPK--LVQPTFVLDYPVEISPLAKPHRSNAALTERFELFICGREMANAFSELTDPV 512

Query: 283 EQRHRFEKEMQE------------------KKKIYNETYP--IDEDFLACLT-EMPQSSG 321
           +QR R E+++++                  K    +E+Y   +DEDFL  L   MP +SG
Sbjct: 513 DQRTRLEEQVRQHNAKRAEAASEYAEPNAKKDDDDDESYEVTLDEDFLTALEYGMPPASG 572

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           + +G DRLVML+T + +I +VI  P  +  Q
Sbjct: 573 MGLGIDRLVMLLTNSASIRDVIAFPVLKVQQ 603


>gi|301113228|ref|XP_002998384.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262111685|gb|EEY69737.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 544

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 156/381 (40%), Gaps = 37/381 (9%)

Query: 1   MHQIPSQPWWN--RDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +   P+  +     +  +R+           RP    R  +   +R+Y  +  FIE+++ 
Sbjct: 168 IQPFPNSKYGIKEPEIRFRKKYLDLLTNPSVRPIFETRAKVVRGIRKYLEDRNFIEVETP 227

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     + F T       + K LYL+ +PE   K+L+  G +++F     +RN 
Sbjct: 228 MLFSAAGGAA-AQPFVTNSR---ALGKDLYLRIAPELFLKQLVIGGFDRVFEIGKVFRNE 283

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------- 157
                H PEFT+ E+Y+A+  Y  LM     +I   A+           +          
Sbjct: 284 GIDATHNPEFTICEFYQAYADYNTLMDTAEEMISGIAKNVTGAYKIQYPMDETTEGAEDE 343

Query: 158 ----NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
                 +     + + + E         L         P    L    ++  +  A   T
Sbjct: 344 SAMVEIDFTPPFKRLPILETLEECLGEKLPDVNSPDSIP---ALLDLCERHNVECAKPHT 400

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
            + +  +++   +EP       T L  +P   S LA  +      T+RFEL+    ELCN
Sbjct: 401 CTRLVDKLIGHFVEPKCV--NPTFLYNHPKCMSPLAKAHREQEGVTERFELFVAGKELCN 458

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
           A  EL DP +QR RF  +  ++++  +E +  D++F   L   +P + G  +G DRLVML
Sbjct: 459 AYTELNDPFDQRQRFAAQQADQQRGDSEAHSKDDEFCTALEYGLPPTGGFGIGVDRLVML 518

Query: 333 VTGANNINEVIWTPFSQSNQE 353
           ++G  +I EVI  P  +   +
Sbjct: 519 LSGKPHIREVIMFPAMKPKDD 539


>gi|320593613|gb|EFX06022.1| lysyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 622

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 85/372 (22%), Positives = 152/372 (40%), Gaps = 26/372 (6%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +PS+ +  +D   R              R  L KR+ +   +R++F   +FIE+++ 
Sbjct: 228 LHILPSEYYGFKDHEQRFRSRYLDLLFNDASRETLWKRSRMIKYIRDFFSTREFIEVETP 287

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G  T +  F T     + + + LYL+ +PE   K L+  G  K+F     +RN 
Sbjct: 288 TLAAIAGGATAL-PFITH---HNSLNRDLYLRIAPELYLKMLIVGGFNKVFELGKNFRNE 343

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN------VNCNP 161
                H PE+T +E+Y A+     +M     ++    +       +            N 
Sbjct: 344 GIDLTHSPEYTSIEFYAAYYDVYDVMAMTEELVSGLVKDLTGSYKTSFTTQHGEVYEVNW 403

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +    I +     +          +              Q+  +      T + +   +
Sbjct: 404 EAPWRRIDMIPELEKITGKTFPPGDELHTDETNKFFRELLQELKLECPPPLTNARMLDTL 463

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E +EP        +   +P   S LA  +       +RFE + C  E+ NA  EL +P
Sbjct: 464 VGEYLEPQCISPGFIL--NHPQMMSPLAKYHRDRKGLCERFEAFVCKKEIANAYTELNNP 521

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR RFE++ ++K +  +E   +DE+FL  L   +P + G  +G DRL M +T    I 
Sbjct: 522 FDQRMRFEEQARQKAQGDDEAQLVDENFLRALEHGLPPTGGWGLGIDRLAMFLTNNYAIR 581

Query: 341 EVIWTPFSQSNQ 352
           EVI  P  + ++
Sbjct: 582 EVISFPMLKEDK 593


>gi|160944697|ref|ZP_02091924.1| hypothetical protein FAEPRAM212_02211 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443881|gb|EDP20885.1| hypothetical protein FAEPRAM212_02211 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104347|emb|CBL01891.1| Lysyl-tRNA synthetase (class II) [Faecalibacterium prausnitzii
           SL3/3]
          Length = 503

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 157/368 (42%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              +KR+ I   +R Y  E  F+E+D+ 
Sbjct: 148 LRPLPEKFHGLTDTEMRYRQRYVDLIANPEVKDTFIKRSRILKEIRAYLDEKGFLEVDTP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L       +  R F T     + +   + L+   E   K+L+  G ++++     +RN 
Sbjct: 208 ILTPFEIGAS-ARPFYTH---HNTLNMDMVLRIETELYLKRLIVGGMDRVYEVGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y+A   +  +M     + +  A      +           S  E 
Sbjct: 264 GMDPKHNPEFTTIELYQAFTDFHGMMDLVEELYKRLALKICGSLVIPYQGKQIDMSHWER 323

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +T+ EA  +Y+ +D        D          A+   + +    T   I +      +E
Sbjct: 324 LTMVEAVKKYSGVDFN------DWQTDADAIAAAKAHNVELPEVPTKGAILAEFFDAFVE 377

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA   P DP FT+RFE +    E  NA  EL DPI+Q+ R
Sbjct: 378 DK--LIQPTFIYDYPVEISPLAKRKPDDPAFTERFEYFIDCTEYGNAFSELNDPIDQKGR 435

Query: 288 FEKEMQEKKKIYNE-TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE+++ E+K +  E    +D D++  L   +P + G+  G DRLVML+T + +I +V+  
Sbjct: 436 FERQVAERKALEPECKAQVDYDYVNALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLF 495

Query: 346 PFSQSNQE 353
           P  +  ++
Sbjct: 496 PTMKPIEQ 503


>gi|218961955|ref|YP_001741730.1| lysyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167730612|emb|CAO81524.1| lysyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 498

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 157/376 (41%), Gaps = 39/376 (10%)

Query: 1   MHQIPS-------------QPWWNRDFHYRRRP-----------FLLKRNMIQSSLREYF 36
           +  +P+               + + +  YR+R                R  I +++R + 
Sbjct: 135 IRPLPAVKEKIVDGKKIRYDEFSDIELRYRKRYLDLLLNPEHRKVFETRAKIITAIRNFM 194

Query: 37  VENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
               ++E+++  LQ   G   + R F T     + +   LYL+ + E   K+L+  G EK
Sbjct: 195 DSRGYVEVETPILQPLYGGA-NARPFITH---HNTLDMDLYLRIATELYLKRLIVGGFEK 250

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQ 155
           ++     +RN      H PEFTM+E+Y A+   E +M     +I+  A ++  +  F + 
Sbjct: 251 VYELGKDFRNEGMDRTHNPEFTMIEFYEAYSDLEGMMDIAEELIKHLALDIIGKDTFFYH 310

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
           N       E +  ++ +  + +          N        L    +   + +       
Sbjct: 311 NHQVCLSGEWKRASLPDLVSEFVG-------QNVMNISFEELSTICKNKELVIPPGSEKG 363

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            + + +    +E    +   T +  +P   S LA   P +P    RFEL+    E  NA 
Sbjct: 364 KLIALLFENFVEET--LIQPTFVRDFPKEVSPLAKAKPENPFVADRFELFIAGGEFANAF 421

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP+EQR R E++ + +    ++   +DEDFL  L   MP   G  +G DRLVML+T
Sbjct: 422 SELNDPLEQRVRLEEQAKLRALGIDDANVVDEDFLEALEYGMPPMGGQGIGIDRLVMLLT 481

Query: 335 GANNINEVIWTPFSQS 350
             ++I EVI  P  ++
Sbjct: 482 ENDSIKEVILFPQMKT 497


>gi|313773647|gb|EFS39613.1| lysyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
          Length = 1081

 Score =  305 bits (781), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLLGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|269219313|ref|ZP_06163167.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211460|gb|EEZ77800.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 1167

 Score =  305 bits (781), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 156/367 (42%), Gaps = 29/367 (7%)

Query: 1    MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +   P +    RD     R+R             LL R+    ++R    E+ F+E+++ 
Sbjct: 809  LTPPPDKHRGLRDAEVRVRQRHMDLALGGEARRRLLARSAAVRAIRGRLAEHGFVEVETP 868

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             L    G   + R FST +   +     L L+ +PE   K+L   G EKIF     +RN 
Sbjct: 869  MLNRIHGGA-NARPFSTHI---NAYDLDLTLRIAPELYLKQLCVGGFEKIFEIGKNFRNE 924

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEP 165
                 H PEFT LE Y AH  Y  + +   ++IR AA   + K  +        +   E 
Sbjct: 925  GADSTHNPEFTALEAYEAHGDYTTMRRLAEDLIRTAAWAVHGKAVAPAPGGGVVSLDGEW 984

Query: 166  EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
              ++V  A +R    D+              L    ++ GIR A   T  D+ S +  E 
Sbjct: 985  PVVSVHAAVSRAVGADVTPDTP------ADELQRLCRERGIRYAASMTAGDLVSELYEEL 1038

Query: 226  IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            +E        T    +P   S L   +  DPR  +R++L A  +EL  A  EL DP++QR
Sbjct: 1039 VE--GSTTAPTFYTDFPVETSPLTRRHRDDPRLAERWDLVAFGMELGTAYTELTDPVDQR 1096

Query: 286  HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             R  ++         E   +DE+FL+ L   MP + G+ +G DR+ M + GA +I E + 
Sbjct: 1097 QRLTEQSLRAAAGDPEAMEVDEEFLSALEFGMPPTGGLGLGIDRIAMFLLGA-SIRETLA 1155

Query: 345  TPFSQSN 351
             PF +  
Sbjct: 1156 FPFVRPE 1162


>gi|301107430|ref|XP_002902797.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262097915|gb|EEY55967.1| lysyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 651

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 82/377 (21%), Positives = 152/377 (40%), Gaps = 30/377 (7%)

Query: 1   MHQIPSQPWWN---RDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDS 46
           MH +P         +D  YR+R                R  I + +R +  E  F+E+++
Sbjct: 200 MHMLPKSHAGLTLQQDTRYRQRYLDLIMNDDSRGVFQTRAKIINFIRRFLDEKNFLEVET 259

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             +    G  T  + F T     + +   L+++ +PE   K+L+  G ++++     +RN
Sbjct: 260 PMMNMIVGGAT-AKPFVT---YHNDLHMNLFMRVAPELYLKQLVIGGLDRVYEIGRQFRN 315

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-------KIFSFQNVNC 159
                 H PEFT  E+Y A+  Y  LM     +     +           K    + V  
Sbjct: 316 EGIDLTHNPEFTSCEFYMAYADYNDLMTMTEKLFSEMVKEITGGYTITIQKEPGEEAVTI 375

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + +++  A      + +     +  +    +L     +  +  A   + + +  
Sbjct: 376 DFTPPFKRVSMVSAVEEATGVKVPI---DEPEKCVAILEELVTKYELECAPPRSIARLLD 432

Query: 220 RILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
           +++   IE           +   P   S LA  +   P  T+RFEL+    E+CNA  EL
Sbjct: 433 KLVGHFIEDNKAYWTKPFFIMDQPVYNSPLAKYHREKPALTERFELFLAGAEICNAYTEL 492

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            +P  QR RF ++M++     +E  P DE F   +   +P ++G   G DRL M ++   
Sbjct: 493 NNPKVQRERFIEQMEQAAAGDDEAQPHDESFCTAMEYGLPPTAGWGCGVDRLTMFLSNRF 552

Query: 338 NINEVIWTPFSQSNQEE 354
           NI EV+  P  + +++ 
Sbjct: 553 NIKEVLLFPAMKPDEQA 569


>gi|296439732|sp|Q5Z3P6|LYSX_NOCFA RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
          Length = 1128

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 152/365 (41%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     + +   R+R             L KR+ +  SLRE      ++E+++ 
Sbjct: 771  LHPLPDKWKGLADPEARVRQRYVDMAINPETRDVLAKRSAVVRSLRESLNSWGYLEVETP 830

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   +   F+T +   +     LYL+ +PE   K+L   G EK+F     +RN 
Sbjct: 831  ILQQVHGGA-NATPFTTHI---NAYDLDLYLRIAPELYLKRLCVGGMEKVFELGRTFRNE 886

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y AH  Y ++M  C  +I+ AA  AN  + + +          + 
Sbjct: 887  GVDFSHNPEFTILEAYEAHSDYIRMMHTCRVLIQNAALAANGSMVAMRPGADGALEPVDI 946

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +      +   +     L     + G+   H      I   +    +E
Sbjct: 947  SGDWPVKTVHGAVSAAVGTEITPRTGVAELRELCDRVGVPYQHGWDEGQIVLEMYEHLVE 1006

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P  T+R++L A  +EL  A  EL DP+EQR R
Sbjct: 1007 ARTEE--PTFYVDFPTSVSPLTRAHRSTPGVTERWDLVAWGVELGTAYSELTDPVEQRRR 1064

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              ++         E   +DEDFL  L   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1065 LTEQSVLAANGDPEAMELDEDFLQALEHAMPPTGGLGMGVDRIVMLITG-RSIRETLPFP 1123

Query: 347  FSQSN 351
              +  
Sbjct: 1124 LVKPR 1128


>gi|54022067|ref|YP_116309.1| lysyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54013575|dbj|BAD54945.1| putative lysyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 1061

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 152/365 (41%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     + +   R+R             L KR+ +  SLRE      ++E+++ 
Sbjct: 704  LHPLPDKWKGLADPEARVRQRYVDMAINPETRDVLAKRSAVVRSLRESLNSWGYLEVETP 763

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   +   F+T +   +     LYL+ +PE   K+L   G EK+F     +RN 
Sbjct: 764  ILQQVHGGA-NATPFTTHI---NAYDLDLYLRIAPELYLKRLCVGGMEKVFELGRTFRNE 819

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y AH  Y ++M  C  +I+ AA  AN  + + +          + 
Sbjct: 820  GVDFSHNPEFTILEAYEAHSDYIRMMHTCRVLIQNAALAANGSMVAMRPGADGALEPVDI 879

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +      +   +     L     + G+   H      I   +    +E
Sbjct: 880  SGDWPVKTVHGAVSAAVGTEITPRTGVAELRELCDRVGVPYQHGWDEGQIVLEMYEHLVE 939

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P  T+R++L A  +EL  A  EL DP+EQR R
Sbjct: 940  ARTEE--PTFYVDFPTSVSPLTRAHRSTPGVTERWDLVAWGVELGTAYSELTDPVEQRRR 997

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              ++         E   +DEDFL  L   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 998  LTEQSVLAANGDPEAMELDEDFLQALEHAMPPTGGLGMGVDRIVMLITG-RSIRETLPFP 1056

Query: 347  FSQSN 351
              +  
Sbjct: 1057 LVKPR 1061


>gi|261749371|ref|YP_003257056.1| lysyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497463|gb|ACX83913.1| lysyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 518

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 97/377 (25%), Positives = 159/377 (42%), Gaps = 39/377 (10%)

Query: 1   MHQIPS----------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + N +  YR R              LKR  I   +R +  + 
Sbjct: 155 LRPLPQVKVDKNKKIYDAFSNPEQRYRMRYVDLIVNDHVKEIFLKRTHIIRKIRNFLDDK 214

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            ++E+D+  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G   ++ 
Sbjct: 215 GYLEVDTPILQSIPGGAV-ARPFVT---YHNSLGIPLYLRIANELYLKRLIIGGFHGVYE 270

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ--KIFSFQNV 157
           F+  +RN     LH PEFT+LE Y A++ Y  +M     +++C      +  K    +N 
Sbjct: 271 FSKNFRNEGMDRLHNPEFTVLELYVAYKDYYWMMNFTEKLLKCIFHQMQKNFKDILIEND 330

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           + +  +    I + +A   +   DL    +         L    Q+  I          +
Sbjct: 331 SISFQTPFPRIPILDAIQTHTGFDLREMEEE-------ELRKICQKLHIEENSQMNKGKL 383

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I   K E +      T +  YP   S L   +      ++RFEL     E+ NA  E
Sbjct: 384 IENIFEVKCEKHY--KNPTFIIDYPIEMSPLTKRHRYKKNLSERFELIVNGQEIANAYSE 441

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DPI+Q  R  ++++  +K   E+  +D+DF+  L   MP ++GI +G DRLVML T  
Sbjct: 442 LNDPIDQLDRLREQIKFSEK--KESMFLDKDFIRALEFGMPPTAGIGIGIDRLVMLFTKQ 499

Query: 337 NNINEVIWTPFSQSNQE 353
           N+I EV+  P  +   +
Sbjct: 500 NSIQEVLLFPQMRPENK 516


>gi|118399585|ref|XP_001032117.1| lysyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89286455|gb|EAR84454.1| lysyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 659

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 91/374 (24%), Positives = 157/374 (41%), Gaps = 31/374 (8%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +PS     +D    YR+R              + R  I S +R Y  +  F+E+++ 
Sbjct: 277 LHMLPSLHTGLKDMETRYRKRYLDLIMNNSSRNNFITRTKIISYIRRYLDDRNFLEVETP 336

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   ++++ +PE   K L+  G E+++     +RN 
Sbjct: 337 QMNMIPGGAA-ARPFVTH---HNDLNMDIFMRIAPELYLKNLVVGGFERVYEIGKQFRNE 392

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN----------V 157
                H PEFT +E Y+A+  YE +MK   +++               +           
Sbjct: 393 GIDRTHNPEFTSIELYQAYADYEDMMKLTEDLLSSLVMKLTGSYKIKFHPEGKENPDNSY 452

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +     + + + E  +            + ++  R        Q  +  +   + + +
Sbjct: 453 EIDFTPPFKRVPMMETLSEKLGGVKMPENYDTEEA-REFFDKLCVQHNVACSAPRSTTRL 511

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             +++   IE +      T L  +P   S LA  + + P  T+RFEL+    ELCNA  E
Sbjct: 512 IDKLVGHFIEVDC--KNPTFLMEHPQIMSPLAKYHRSKPNVTERFELFVNYYELCNAFTE 569

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGA 336
           L DP +QR  F ++++EK K   E    D+DF  CL   +P + G  +G DRLVML+T  
Sbjct: 570 LNDPFKQRKIFVQQIEEKNKGDVEAMGYDKDFCDCLEHALPPTGGWGLGIDRLVMLLTDN 629

Query: 337 NNINEVIWTPFSQS 350
             I EV+  P  + 
Sbjct: 630 IYIQEVLLFPAMKP 643


>gi|296439739|sp|A0QHC4|LYSX_MYCA1 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
          Length = 1177

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 89/364 (24%), Positives = 149/364 (40%), Gaps = 21/364 (5%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  S+R+      FIE+++ 
Sbjct: 820  LRPLPNKWKGLTDPEARVRTRYVDLAVNPESRELIAARSEVLRSVRQTLFAKGFIEVETP 879

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 880  ILQQIHGGAT-ARPFVTHI---NTYDMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 935

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA+ A+ +    +          + 
Sbjct: 936  GVDFSHNPEFTLLEAYQAHADYRVWIDGCRELIQNAAQAAHGEQTVLRPGADGRLQPVDI 995

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              +      +  +                L   +  A I          +   +    +E
Sbjct: 996  SGIWAVKTVHDAVSEALGEQVDPGTSLSTLRKLSDAARIPYRAHWDAGAVVLELYEHLVE 1055

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R
Sbjct: 1056 DRTEE--PTFYVDFPTSVSPLTRPHRSRPGVAERWDLVAWGVELATAYSELTDPVEQRRR 1113

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +++         E   +DEDFL  +   MP + G+ MG DRLVML+TG  +I E +  P
Sbjct: 1114 LQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRLVMLITG-RSIRETLPFP 1172

Query: 347  FSQS 350
             ++ 
Sbjct: 1173 LAKP 1176


>gi|41407449|ref|NP_960285.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
            K-10]
 gi|81414391|sp|Q740J9|LYSX_MYCPA RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|41395801|gb|AAS03668.1| LysX [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 1177

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 89/364 (24%), Positives = 149/364 (40%), Gaps = 21/364 (5%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  S+R+      FIE+++ 
Sbjct: 820  LRPLPNKWKGLTDPEARVRTRYVDLAVNPESRELIAARSEVLRSVRQTLFAKGFIEVETP 879

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 880  ILQQIHGGAT-ARPFVTHI---NTYDMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 935

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA+ A+ +    +          + 
Sbjct: 936  GVDFSHNPEFTLLEAYQAHADYRVWIDGCRELIQNAAQAAHGEQTVLRPGADGRLQPVDI 995

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              +      +  +                L   +  A I          +   +    +E
Sbjct: 996  SGIWAVKTVHDAVSEALGEQVDPGTSLSTLRKLSDAARIPYRAHWDAGAVVLELYEHLVE 1055

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R
Sbjct: 1056 DRTEE--PTFYVDFPTSVSPLTRPHRSRPGVAERWDLVAWGVELATAYSELTDPVEQRRR 1113

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +++         E   +DEDFL  +   MP + G+ MG DRLVML+TG  +I E +  P
Sbjct: 1114 LQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRLVMLITG-RSIRETLPFP 1172

Query: 347  FSQS 350
             ++ 
Sbjct: 1173 LAKP 1176


>gi|302538179|ref|ZP_07290521.1| lysyl-tRNA synthetase [Streptomyces sp. C]
 gi|302447074|gb|EFL18890.1| lysyl-tRNA synthetase [Streptomyces sp. C]
          Length = 1100

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 94/363 (25%), Positives = 150/363 (41%), Gaps = 21/363 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     + +   RRR             +  R+    +LR+  ++  ++E+++ 
Sbjct: 743  LRPLPDKRKGLADPEARVRRRYLDLVASPDARDVVRARSSAVQALRQGLLDRGYLEVETP 802

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L   G EK+F     +RN 
Sbjct: 803  MLQQIHGGA-NARPFRTHI---NAYDLDLYLRIAPELYLKRLCVGGMEKVFEMGRTFRNE 858

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A   Y+ ++     +I+ AA  A     + +          + 
Sbjct: 859  GVSYKHNPEFTMLEAYQAFADYDVMLDLTRELIQGAATAAFGSPVAHKAGPDGKLVVHDI 918

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     Y  I      +     +  +L +   +AG+    DDT  D+   +    +E
Sbjct: 919  SGPWPVKTMYGAISEALGEEVDADTEEQVLRVLCDRAGVPHGPDDTRGDVVLEMYERLVE 978

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                +   T    +P   S L   +  DPR  +R++L A   EL  A  EL DPIEQR R
Sbjct: 979  ERTKL--PTFYKDFPTDVSPLTRQHRKDPRLAERWDLVAFGTELGTAYSELTDPIEQRRR 1036

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               +         E   +D DFL  L   MP + G+ +G DRLVM +TG   I E +  P
Sbjct: 1037 LTAQSLLAAGGDAEAMELDNDFLDALEYAMPPTGGLGIGVDRLVMFLTGL-TIRETLPFP 1095

Query: 347  FSQ 349
              +
Sbjct: 1096 LVR 1098


>gi|116620161|ref|YP_822317.1| lysyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116223323|gb|ABJ82032.1| lysyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 501

 Score =  305 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 105/365 (28%), Positives = 169/365 (46%), Gaps = 30/365 (8%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R  I SSLR       FIE+++ 
Sbjct: 138 LLSMPEKWHGLEDVETRYRQRYLDLIANADVRKVFVTRAKIISSLRRQLEARNFIEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G     R F T     + +   LYL+ +PE   K+L+  G E+++     +RN 
Sbjct: 198 MMQPLYGGAA-ARPFVTH---HNTLDIDLYLRIAPELYLKRLVVGGMERVYEINRNFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE+Y+A+  Y  L+     ++R AA  A          +   FS    
Sbjct: 254 GLSTHHNPEFTMLEFYQAYTDYRGLIDFSEELLRQAAIDATGSPVVEFEGHQIDFSCLAR 313

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            ++ EA  R+   D   T+++   P+   +         +    +  +DIF R + +K  
Sbjct: 314 YSMREAIVRHWEGDGAPTMEDVASPEWLSV------HSGKATAGERLTDIFERHVEDK-- 365

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T++  YP   S L+   P DP F +RFE+YA  +E+ NA  EL DP EQR R
Sbjct: 366 ----LIQPTVIYDYPVETSPLSKNKPEDPAFVERFEIYAAGMEIGNAYTELNDPQEQRRR 421

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE ++  +++   E + +DED++  L   MP + G  +G DRL M++TG+ +I +VI  P
Sbjct: 422 FEMQIGMRERGDEEAHQMDEDYVRALAYGMPPTGGEGIGIDRLTMILTGSRSIRDVILFP 481

Query: 347 FSQSN 351
             +  
Sbjct: 482 LLRPE 486


>gi|15231261|ref|NP_187958.1| OVA5 (OVULE ABORTION 5); ATP binding / aminoacyl-tRNA ligase/
           lysine-tRNA ligase/ nucleic acid binding / nucleotide
           binding [Arabidopsis thaliana]
 gi|9280301|dbj|BAB01756.1| lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|26983796|gb|AAN86150.1| putative lysyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332641843|gb|AEE75364.1| Lysyl-tRNA synthetase, class II [Arabidopsis thaliana]
          Length = 602

 Score =  305 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 96/391 (24%), Positives = 159/391 (40%), Gaps = 45/391 (11%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R  I S +R+      ++E+++ 
Sbjct: 218 LLPLPDKYHGLTDIDKRYRQRYVDMIANPEVADVFRRRAKIVSEIRKTVESFGYLEVETP 277

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + + + LYL+ + E   K++L  G EK++     +RN 
Sbjct: 278 VLQGAAGGA-EARPFVT---FHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNE 333

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  Y  +M     I+   +   N K    +Q           
Sbjct: 334 GISTRHNPEFTTIEMYEAYSDYHSMMDMAELIVTQCSMAVNGKLTIDYQGTEICLERPWR 393

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT----WSDIFSRIL 222
             T+         I+     ++       +L         +             + + I 
Sbjct: 394 RETMHNLVKEITGINFSELGEDLGNAKDTVLLALQDVLEPKDKSGIRACSSLGHLLNEIF 453

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +EP   +   T +  YP   S LA  +  +   T+RFEL+ C  E+ NA  EL DP+
Sbjct: 454 EVVVEPK--LVQPTFVLDYPIEISPLAKPHRGNAGLTERFELFICGREMANAFSELTDPV 511

Query: 283 EQRHRFEKEMQE------------------KKKIYNETYP--IDEDFLACLT-EMPQSSG 321
           +QR R E+++++                  K    +E+Y   +DEDFL  L   MP +SG
Sbjct: 512 DQRTRLEEQVRQHNAKRAEAVRESPEPNAKKDDDDDESYEVTLDEDFLTALEYGMPPASG 571

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           + +G DRLVML+T + +I +VI  P  +  Q
Sbjct: 572 MGLGIDRLVMLLTNSASIRDVIAFPVLKLQQ 602


>gi|150397998|ref|YP_001328465.1| lysyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166230590|sp|A6UDA0|SYK_SINMW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|150029513|gb|ABR61630.1| lysyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 498

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/369 (26%), Positives = 165/369 (44%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I SSLR +  +  F+E+++ 
Sbjct: 142 LLPMPEKYHGLADIETRYRKRYLDIMVNEESKLRFQQRSRIVSSLRRFLEDEGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            LQ   G  T    F T     + ++  +YL+ +PE   K++L +G  +K+F     +RN
Sbjct: 202 MLQPIYGGAT-AEPFKTH---HNTLKLDMYLRIAPELYLKRVLVSGLTDKVFEINRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A        F F +   +     
Sbjct: 258 EGVSTRHNPEFTMMECYWAYADYEDVMGLVERMFETLALAVHGTTEFEFGDKQLSFKGPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +++  A      ID      + +          A+ AG+ +  D TW ++ + +  EK
Sbjct: 318 PRVSMPAAVKDATGIDFLAIKSDEE------ARQAARDAGVEIEKDATWGEVLAFLFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +     +  +P   S  A   P +PR  +RFE Y    E+ NA  EL DP+EQR
Sbjct: 372 VEAT--LIQPAHVIHFPKDISPFAKEVPGEPRLVERFETYCNGWEIGNAFSELNDPVEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  ++M++      +   +DEDFL  +   MP + G+ +G DRL+ML+T + +I ++I 
Sbjct: 430 ARMVEQMEQAHARGEKEKTLDEDFLDAMDQGMPPAGGLGIGVDRLIMLLTNSPSIRDIIL 489

Query: 345 TPFSQSNQE 353
            P  +   +
Sbjct: 490 FPARRHKSD 498


>gi|296271373|ref|YP_003654005.1| lysyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296094160|gb|ADG90112.1| lysyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 499

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 147/366 (40%), Gaps = 29/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   RRR   L            R+    ++R+++    ++E+++ 
Sbjct: 145 LRPLPEKHIGLTDPEARVRRRYVDLIVNDEARKMAYIRSATVRAVRDFWHNEGYLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T +   +     LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 205 MLQPIHGGAA-ARPFKTHI---NAYDMDLYLRIAIELYLKRLVVGGIEKVFEVNRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF--SEP 165
                H PEFTMLE Y  +  Y  +      + + A + A                  E 
Sbjct: 261 GADATHNPEFTMLEAYGTYLDYNDMAVLTQRMYQHAVQAALGTTVVVHKGQEVDLGQKEW 320

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             IT+  + +     ++        +     +   A + G+R         +   +  E 
Sbjct: 321 PKITLYGSVSEALGEEVTP------ETPLEEVRKHADKVGLRWDPKWGPGKLVQELFEEL 374

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP   S L   +  +P  T++++L     EL  A  EL+DPIEQR
Sbjct: 375 VEPT--LIQPTFVYDYPLETSPLTRQHRDNPLLTEKWDLIGFGTELGTAYSELIDPIEQR 432

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  ++         E   +DEDFL  L   MP + G+ +G DR++M  TG  NI E I 
Sbjct: 433 RRLTEQSLLAAGGDPEAMQLDEDFLEALEYGMPPTGGVGVGIDRMIMAFTG-KNIRETIL 491

Query: 345 TPFSQS 350
            P  + 
Sbjct: 492 FPLVKP 497


>gi|291540501|emb|CBL13612.1| Lysyl-tRNA synthetase (class II) [Roseburia intestinalis XB6B4]
          Length = 498

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 163/369 (44%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + D  YR+R              +KR+ I   +R +  +  F+E+++ 
Sbjct: 140 LQILPEKFHGLTDTDMRYRQRYIDLIMNQESKEVFIKRSKILKEIRNFLADRDFMEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + + + L+ S E   K+L+  G E+++     +RN 
Sbjct: 200 MLVSNAGGAA-ARPFETHY---NALNEDVKLRISLELYLKRLIVGGLERVYEIGRVFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y+A+  YE +M+   ++ R  A +V      S+  +  +      
Sbjct: 256 GVDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLAEKVCGSTKISYNGIEIDLGKPFT 315

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ +A  +Y  ID  T  D+             ++  I         DI +    E  
Sbjct: 316 RMTMNDAIKKYTGIDFDTVADDAAAKKLA------EEHHIAYEERHKKGDIINLFFEEFC 369

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L    P+DP   +RFEL+    E+CNA  EL DP++QR 
Sbjct: 370 EKE--LIQPTFIMDHPIEISPLTKKKPSDPTKVERFELFINTWEMCNAYSELNDPVDQRE 427

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +        +E    DEDFL  L   MP + GI  G DRLVML+T +  I +V+  
Sbjct: 428 RFAAQDANAAAGDDEAEHTDEDFLNALEIGMPPTGGIGYGIDRLVMLLTDSAAIRDVLLF 487

Query: 346 PFSQSNQEE 354
           P  +S  ++
Sbjct: 488 PTMKSLDKK 496


>gi|300783136|ref|YP_003763427.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32]
 gi|299792650|gb|ADJ43025.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32]
          Length = 1107

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 154/365 (42%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     + +   R+R             L  R+ +  ++R+      ++E+++ 
Sbjct: 749  LHPLPDKRKGLTDPETRVRQRYLDLAVNPDSTNMLRLRSTVVRAVRDRLHHADYLEVETP 808

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     +YL+ +PE   K+L  AG E++F     +RN 
Sbjct: 809  MLQTVHGGA-NARPFVTHI---NAYDMRMYLRIAPELYLKRLCVAGVERVFELNRNFRNE 864

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y+ +      +++ AAE A       +        E + 
Sbjct: 865  GVDATHNPEFTMLEAYQAYADYDTMRTLTRELVQHAAEAAYGAQVVRRPDADGKVVEYDI 924

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +      +         L      AG+ V  D +  D+  +     +E
Sbjct: 925  SGDWPVVPVHEAVSARFGEEIDPGTPVAELRRLCVAAGVPVGEDPSHGDLVLKAFEHLVE 984

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                +   T    YP   S L   +  DPR  +R++L A   E+  A  EL DPIEQR R
Sbjct: 985  GATVL--PTFYTDYPTDVSPLTRQHRVDPRLAERWDLIAFGSEVGTAYTELTDPIEQRRR 1042

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E +         E   +DEDFL  L   MP + G+ +G DRL+M++TGA +I + +  P
Sbjct: 1043 LEGQSLRAASGDVEAMELDEDFLLALEHGMPPTGGLGLGVDRLLMMLTGA-SIRQTVLFP 1101

Query: 347  FSQSN 351
            F +  
Sbjct: 1102 FVRPQ 1106


>gi|297563902|ref|YP_003682875.1| lysyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848351|gb|ADH70369.1| lysyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 500

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 87/368 (23%), Positives = 154/368 (41%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R+R             + +R+    ++RE      F+E+++ 
Sbjct: 146 LRPLPEKHKGLTDPEARVRQRYVDLIVNPESQQMVRRRSAAIRAIREGLASRDFVEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F+T +   +     LYL+ +PE S K+L+  G EK+F     +RN 
Sbjct: 206 MLMRVHGGAT-ARPFTTHI---NAYDMDLYLRIAPELSLKRLVVGGLEKVFEVNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  +      +I+ AA       +        +   E  
Sbjct: 262 GADSTHNPEFTMLEFYQAYADYNVMADLTRELIQEAARAVFGSTVVERDGRTYDLGGEWP 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+  A +     ++        +     +   A   G+          +   +  E +
Sbjct: 322 QVTLYGAVSEALGAEVDP------RTPIDEVRRLADSRGVEYDPSWGQGKLVEHVFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L   +  DP  T++++L    +E+     EL+DP+EQR 
Sbjct: 376 EHT--LVQPTFVRDFPVETSPLTRQHREDPLLTEKWDLIGFGMEMGTGYSELVDPVEQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R  ++     +   E   +DEDFL  L   MP + G+ +G DRL+M  TG  NI E +  
Sbjct: 434 RLTRQSLMAAEGDPEAMQLDEDFLRALEYGMPPTGGVGVGIDRLLMAFTG-KNIRETVLF 492

Query: 346 PFSQSNQE 353
           P  + + +
Sbjct: 493 PLVKPSGD 500


>gi|254775578|ref|ZP_05217094.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 1085

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 89/364 (24%), Positives = 149/364 (40%), Gaps = 21/364 (5%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  S+R+      FIE+++ 
Sbjct: 728  LRPLPNKWKGLTDPEARVRTRYVDLAVNPESRELIAARSEVLRSVRQTLFAKGFIEVETP 787

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 788  ILQQIHGGAT-ARPFVTHI---NTYDMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 843

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA+ A+ +    +          + 
Sbjct: 844  GVDFSHNPEFTLLEAYQAHADYRVWIDGCRELIQNAAQAAHGEQTVLRPGADGRLQPVDI 903

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              +      +  +                L   +  A I          +   +    +E
Sbjct: 904  SGIWAVKTVHDAVSEALGEQVDPGTSLSTLRKLSDAARIPYRAHWDAGAVVLELYEHLVE 963

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R
Sbjct: 964  D--PTEEPTFYVDFPTSVSPLTRPHRSRPGVAERWDLVAWGVELATAYSELTDPVEQRRR 1021

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +++         E   +DEDFL  +   MP + G+ MG DRLVML+TG  +I E +  P
Sbjct: 1022 LQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRLVMLITG-RSIRETLPFP 1080

Query: 347  FSQS 350
             ++ 
Sbjct: 1081 LAKP 1084


>gi|314919392|gb|EFS83223.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
          Length = 1081

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 145/365 (39%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722  LRPLPLRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782  ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838  GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                        I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898  ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +  DPR  ++++L     E+  A  EL+DP+ QR R
Sbjct: 958  --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRER 1015

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F  +         E   +DEDFL  L   MP S G+ MG DRLVM++T A +I E I  P
Sbjct: 1016 FTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNA-SIRETISFP 1074

Query: 347  FSQSN 351
              +  
Sbjct: 1075 LVRPR 1079


>gi|71892044|ref|YP_277774.1| lysyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|123734157|sp|Q493E1|SYK_BLOPB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|71796150|gb|AAZ40901.1| lysyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 509

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 162/369 (43%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWWN--RDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +      ++  YR+R                R+++ S +R++  +N F+E+++ 
Sbjct: 152 LRPLPDKFHGLNNQETKYRQRYLDLIINENTRKTFKIRSLVISEIRQFMKKNNFMEVETP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G       F T     + +   +YL+ +PE   KKL+  G E+IF    ++RN 
Sbjct: 212 MMHTIAGGAI-AHPFITH---HNKLGIDMYLRIAPELYLKKLVIGGFERIFEINRSFRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  ++    N++R   + +    I ++ +   +      
Sbjct: 268 GISSYHNPEFTMMEIYMAYADYRDIIILVQNLLRSVTQKILGSNIINYGDYELDFKHPFT 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ EA   Y          + +  D       A+  GI+V    T   I   I  E I
Sbjct: 328 QISIKEAILYYL-----PETRSQNIDDICTAVSIAKSLGIKVKSCWTLHRIHMVIFEEVI 382

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  YP   S LA     +P F  RFEL+    E+ N   EL DP +Q+ 
Sbjct: 383 EKK--IIQPTCVTSYPIEISPLARRNDNNPEFADRFELFIAGREIGNGFSELNDPEDQKE 440

Query: 287 RFEKEM---QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           RF K+    + K    N     DED+L  L   +P ++GI +G DRL+ML+T ++ I +V
Sbjct: 441 RFLKQAYGKKNKINNNNVHIHYDEDYLIALEYGLPPTAGIGIGIDRLIMLLTDSHTIRDV 500

Query: 343 IWTPFSQSN 351
           I  P  +  
Sbjct: 501 ILFPTLRPK 509


>gi|262341118|ref|YP_003283973.1| lysine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
 gi|262272455|gb|ACY40363.1| lysine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str.
           Bge]
          Length = 496

 Score =  304 bits (778), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 165/375 (44%), Gaps = 44/375 (11%)

Query: 1   MHQIPS-----------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVE 38
           +  +P              + N +  YR R              LKR  I   +R++  +
Sbjct: 139 IRPLPQVKIDKKNKKTYDAFSNTEQRYRMRYVDLIVNDHVKEIFLKRTRIIQGIRKFLDD 198

Query: 39  NQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIF 98
             ++E+D+  LQ  PG     R F T     + +  PLYL+ + E   K+L+  G   ++
Sbjct: 199 KGYLEVDTPILQSIPGGAI-ARPFET---YHNTLGIPLYLRIANELYLKRLIIGGFHGVY 254

Query: 99  CFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN 158
            F+  +RN     +H PEFT+LE+Y A++ Y  +M     +++C      +K        
Sbjct: 255 EFSKNFRNEGMDRIHNPEFTVLEFYIAYKDYYWMMNFTEQLMKCIWNQFKEKDH------ 308

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +  +    I + ++  +Y   D        ++ +   L    ++  I      + + + 
Sbjct: 309 ISFQTPFPRIPILDSIKKYTGFD-------LEKMEEEELRKVCKKLHIEENPKMSKAKLI 361

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  EK E N      T +  YP   S L   +      ++RFEL     E+ NA  EL
Sbjct: 362 ENIFEEKCEKNY--INPTFIIDYPLEMSPLTKKHRHKENLSERFELIINGQEIANAYSEL 419

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DPI+Q  R  K+++  +K  +E+  +D+DF+  L   MP ++GI +G DRLVML+T   
Sbjct: 420 NDPIDQLDRLRKQIKLSEK--DESMSMDQDFIRALEFGMPPTAGIGIGIDRLVMLLTQKY 477

Query: 338 NINEVIWTPFSQSNQ 352
           +I EV++ P  +  +
Sbjct: 478 SIQEVLFFPQMRPEK 492


>gi|330796288|ref|XP_003286200.1| hypothetical protein DICPUDRAFT_150147 [Dictyostelium purpureum]
 gi|325083870|gb|EGC37312.1| hypothetical protein DICPUDRAFT_150147 [Dictyostelium purpureum]
          Length = 584

 Score =  304 bits (778), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 94/369 (25%), Positives = 157/369 (42%), Gaps = 25/369 (6%)

Query: 2   HQIPSQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
             IP +   +++  YR RP               R+ + + +R + VE  F+E+D+  L 
Sbjct: 218 RPIPLK-INDKEIRYRNRPLDFLVNPENQRAFFIRSKVINYVRSFLVERGFLEVDTPILS 276

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
            + G   + + F T     + +   L+L+ SPE   K+L+ AG +K+F     +RN    
Sbjct: 277 TNVGGA-NAKPFITRS---NSLNLDLFLRISPELFLKQLVVAGFDKVFELGKQFRNEGID 332

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN----VNCNPFSEPE 166
             H PEFT  E+Y+A+  YE ++K    ++                    +  N  +  +
Sbjct: 333 LTHNPEFTTCEFYQAYADYETIVKLTEEMLSGMVYSIFGTYEIPFPANPEIKLNFKAPFQ 392

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I   +         L   L + D      L    +   I      T + I   +    I
Sbjct: 393 RINFIDKIEELTGRTLPKDLTSYDCIPE--LLDICRDNNIHCKEPYTPTRILDEMASTLI 450

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP       T +  +P   S LA I+ ++ + T+RFEL+    EL NA  EL DP EQR 
Sbjct: 451 EPLC--IQPTFVIDHPLAMSPLAKIHRSNNQRTERFELFVGGKELVNAYSELNDPKEQRK 508

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + Q++    +E   +DE F   L   +P + G  +G DRL ML +    I +V++ 
Sbjct: 509 RFLAQSQDRITGDDEAQILDESFCNALEYGLPPTGGWGLGIDRLCMLFSNTTTIKDVLFF 568

Query: 346 PFSQSNQEE 354
           P  +  +++
Sbjct: 569 PTMKPIEQK 577


>gi|297172546|gb|ADI23516.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF0770_41L09]
          Length = 508

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 94/380 (24%), Positives = 161/380 (42%), Gaps = 41/380 (10%)

Query: 1   MHQIP---------------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLRE 34
           +  +P                  + + +  YR+R                R  I  SLR 
Sbjct: 142 LRPLPFGKTEENTETGGRIEHSGFADPETRYRQRYADLAVHPDLRNVFETRTKIIRSLRS 201

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +     F+E+++  LQ   G  +  + F T     + +   +YL+ + E   K+LL  G 
Sbjct: 202 FLDSENFLEVETPVLQPLYGGAS-AKPFVTH---HEALGLTMYLRIADELYLKRLLVGGL 257

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFS 153
           ++++  +  +RN     +H PEFTMLEWY+A   Y   M     I+    + V + +   
Sbjct: 258 DRVYEISKDFRNEGLSRVHNPEFTMLEWYQAFTDYNDQMILVERIVGHVLDEVVSSRELR 317

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
           + N   +       I +  A +    +D+    D         L  +A+  G+       
Sbjct: 318 YGNEMISFEPPFPRIPLVGALSEALGVDVFHLED-------EALRERAKALGLDDLDTAG 370

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
              +  ++    +EP   +   T +  +P   S LA  +  D R T+RFELY   +ELCN
Sbjct: 371 RGKLIDKLFGALVEP--DLVQPTFVIDHPKELSPLAKEHRLDSRLTERFELYVGRVELCN 428

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              EL DP++QR RFE +   +    +E   ID+D++  L   MP + G+ +G DR VM+
Sbjct: 429 GFSELNDPLDQRARFEAQAGLRDAGDDEAQQIDDDYVRALEYGMPPTGGVGLGVDRFVMM 488

Query: 333 VTGANNINEVIWTPFSQSNQ 352
           +T   +I +VI  P  +  +
Sbjct: 489 ITDQPSIRDVILFPILRPEE 508


>gi|254821219|ref|ZP_05226220.1| lysyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 1089

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 157/367 (42%), Gaps = 24/367 (6%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  S+R+   +  FIE+++ 
Sbjct: 729  LRPLPNKWKGLTDPEARVRTRYVDLAVNPESRELITARSEVLRSVRQTLFDKGFIEVETP 788

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 789  ILQQIHGGAT-ARPFVTHI---NTYDMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 844

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y+  +  C  +I+ AAE A+ +    +  +       + 
Sbjct: 845  GVDFSHNPEFTLLEAYQAHADYKVWIDGCRELIQNAAEAAHGEQAVMRPRDQGTGGGLKP 904

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRH---LLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            + ++  +A     D  +               L   +  A I          +   +   
Sbjct: 905  VDISGVWAVKTVYDAVSEALGEHIDPATPLPALRKLSDAAHIPYRAHWDAGAVVLELYEH 964

Query: 225  KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             +E        T    +P   S L   + ++P   +R++L A  +EL  A  EL DP+EQ
Sbjct: 965  LVEDRTEE--PTFYIDFPTSVSPLTRPHRSEPGVAERWDLVAWGVELATAYSELTDPVEQ 1022

Query: 285  RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
            R R +++         E   +DEDFL  +   MP + G+ MG DRLVML+TG  +I E +
Sbjct: 1023 RRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRLVMLITG-RSIRETL 1081

Query: 344  WTPFSQS 350
              P ++ 
Sbjct: 1082 PFPLAKP 1088


>gi|15828873|ref|NP_326233.1| lysyl-tRNA synthetase (lysine--tRNA ligase) (LysRS) [Mycoplasma
           pulmonis UAB CTIP]
 gi|39932449|sp|Q98QG4|SYK2_MYCPU RecName: Full=Lysyl-tRNA synthetase 2; AltName: Full=Lysine--tRNA
           ligase 2; Short=LysRS 2
 gi|14089816|emb|CAC13575.1| LYSYL-TRNA SYNTHETASE (LYSINE--TRNA LIGASE) (LYSRS) [Mycoplasma
           pulmonis]
          Length = 491

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 160/366 (43%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +  +     D    YR+R                R  I S +RE+F +  F+E+++ 
Sbjct: 139 LTPLAEKYHGLVDVEERYRKRYLDLISNPNIKEIFWTRTKIISKIREFFDKQNFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T     + +     L+ + E   KKLL  G ++++     +RN 
Sbjct: 199 MLHSILGGAS-ARPFKT---YHNSLSSSFNLRIATELPLKKLLVGGIDRVYEIGRIFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y+A+ + E +M+   N+I+  A+          +V  +  ++ + 
Sbjct: 255 GIDTTHNPEFTSIEFYQAYSNLEIMMEQTENLIKFIAKELGLSKIKNHDVEIDLLADFKK 314

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I + +A +    +D           D +     A+   I+V        I + +    IE
Sbjct: 315 INMVDAVSEATKVDFRNI-------DLNKAIEIAKSYKIKVEKYFKVGHIINELFELLIE 367

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA     D RFT+R EL+    E  N   EL DP++QR R
Sbjct: 368 KT--LIQPTFVMGYPIEVSPLAACSK-DKRFTERAELFINTKEYANMFTELNDPLDQRRR 424

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE + +EK+    E   IDEDFL  L   +P + G  +G DRLVML+T   +I EVI  P
Sbjct: 425 FEAQFEEKESGNEEASEIDEDFLNALEYGLPPAGGCGIGIDRLVMLLTQKESIREVILFP 484

Query: 347 FSQSNQ 352
             +  Q
Sbjct: 485 TLKKKQ 490


>gi|118467307|ref|YP_882312.1| lysyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118168594|gb|ABK69491.1| lysyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 1075

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 89/364 (24%), Positives = 149/364 (40%), Gaps = 21/364 (5%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  S+R+      FIE+++ 
Sbjct: 718  LRPLPNKWKGLTDPEARVRTRYVDLAVNPESRELIAARSEVLRSVRQTLFAKGFIEVETP 777

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 778  ILQQIHGGAT-ARPFVTHI---NTYDMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 833

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA+ A+ +    +          + 
Sbjct: 834  GVDFSHNPEFTLLEAYQAHADYRVWIDGCRELIQNAAQAAHGEQTVLRPGADGRLQPVDI 893

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              +      +  +                L   +  A I          +   +    +E
Sbjct: 894  SGIWAVKTVHDAVSEALGEQVDPGTSLSTLRKLSDAARIPYRAHWDAGAVVLELYEHLVE 953

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R
Sbjct: 954  DRTEE--PTFYVDFPTSVSPLTRPHRSRPGVAERWDLVAWGVELATAYSELTDPVEQRRR 1011

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +++         E   +DEDFL  +   MP + G+ MG DRLVML+TG  +I E +  P
Sbjct: 1012 LQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRLVMLITG-RSIRETLPFP 1070

Query: 347  FSQS 350
             ++ 
Sbjct: 1071 LAKP 1074


>gi|15966657|ref|NP_387010.1| lysyl-tRNA synthetase protein [Sinorhizobium meliloti 1021]
 gi|307300308|ref|ZP_07580088.1| lysyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307319591|ref|ZP_07599017.1| lysyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|17380505|sp|O87821|SYK_RHIME RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|15075929|emb|CAC47483.1| Lysyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306894713|gb|EFN25473.1| lysyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306904474|gb|EFN35058.1| lysyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 498

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 97/369 (26%), Positives = 164/369 (44%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I SSLR +  +  F+E+++ 
Sbjct: 142 LLPMPEKYHGLADIETRYRKRYLDIMVNEESKLRFQQRSRIVSSLRRFLEDEGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            LQ   G  T    F T     + ++  +YL+ +PE   K++L +G  +K+F     +RN
Sbjct: 202 MLQPIYGGAT-AEPFKTH---HNTLKLDMYLRIAPELYLKRILVSGLTDKVFEINRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A     +  F F +   +     
Sbjct: 258 EGVSTRHNPEFTMMECYWAYADYEDVMGLVERMFETLALAVHGKTEFEFGDKQLSFKGPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +++  A      ID                   A+ AG+ +  D TW ++ + +  EK
Sbjct: 318 PRVSMPAAVKDATGIDFLA------LKSDEEARQAARDAGVEIEKDATWGEVLAFLFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +     +  +P   S  A   P +PR  +RFE Y    E+ NA  EL DP+EQR
Sbjct: 372 VEAT--LIQPAHVIHFPKDISPFAKEVPGEPRLVERFETYCNGWEIGNAFSELNDPVEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  ++M++      +   +DEDFL  +   MP + G+ +G DRL+ML+T + +I ++I 
Sbjct: 430 ARMVEQMEQAHARGEKEKTLDEDFLDAMDQGMPPAGGLGIGVDRLIMLLTNSPSIRDIIL 489

Query: 345 TPFSQSNQE 353
            P  +   +
Sbjct: 490 FPARRQKAD 498


>gi|94985010|ref|YP_604374.1| lysyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555291|gb|ABF45205.1| lysyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 512

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 157/368 (42%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +PS+     + +   RRR                R+ I   LR       F+E++  
Sbjct: 146 LHPLPSKFHGLQDEELRARRRYLDLMVTAGVRQKFQARSRIIRYLRNELDRRGFMEVEGP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +LQ + G     R F T     + +     L+ S E   K+LL  G E+I+     +RN 
Sbjct: 206 TLQVTAGGA-EARPFMTH---HNALSHDFKLRISLELYLKRLLVGGFERIYEIGRVYRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y ++ +    ++   A+  +    F +Q    +      
Sbjct: 262 GIDRTHNPEFTMLELYWAYVDYTEIARLVEELLSGLAQELHGSYTFEYQGRTLDFTPPFA 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +    A   +          +P   DR   +  A+        D     +  ++  E +
Sbjct: 322 RVDYVGALREHV----PGLDFDPLDLDRLRQFSDAR---FPQWKDVPSYKLLDKLFGEFV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +  +PA  S LA  +   P  T+RFE++    EL NA  EL D  +QR 
Sbjct: 375 EP--LLTNPTFVMDHPAVISPLAKRHRTRPGLTERFEVFCSGFELANAFSELNDAFDQRA 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + Q ++    E +  DEDFL  L   MP + G+ +G DRLVML+T +++I +V+  
Sbjct: 433 RFEAQSQRREAGDEEAHAQDEDFLLALEYGMPPAGGLGIGIDRLVMLLTDSDSIRDVLLF 492

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 493 PLLRPEGQ 500


>gi|71027527|ref|XP_763407.1| lysyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350360|gb|EAN31124.1| lysyl-tRNA synthetase, putative [Theileria parva]
          Length = 551

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 87/374 (23%), Positives = 160/374 (42%), Gaps = 29/374 (7%)

Query: 1   MHQIPSQP-WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P +    + D  +R+R             +  R+ I   LR++     F E+++  
Sbjct: 182 LHMLPDKFGLKDNDVRFRQRYLDLMMNDDSLKVMKLRSRIIDYLRKFLTSRGFFEVETPM 241

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L+ +    +  + F T     + +   L+++ +PE   K ++  G EK+F     +RN  
Sbjct: 242 LKTTSTGAS-AKPFITH---HNELDLDLFMRIAPELPLKLIIIGGFEKVFEIGKCFRNEG 297

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------CN 160
               H PEFT  E+Y A+  Y  LMK     +         K     + +         +
Sbjct: 298 IDPTHNPEFTSCEFYWAYADYHDLMKLTEEFLSSLVFELFGKYEVLYHPDGPDTEGVVID 357

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  +++ E       + L    D+ +  +++L  +  ++AG+ +      + +  +
Sbjct: 358 FTPPFNKVSMVEELENKMKMKLSPPYDSQENVEKYLTAI--KEAGLDMPKPPVPAKLIDQ 415

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           ++   IE    I   T +  +P   S L+  + +     +RFEL+ C  EL N+  EL D
Sbjct: 416 LVGHYIEDQ--IVKPTFIVDFPQCTSPLSKWHRSKENVCERFELFICGKELINSYTELND 473

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           PI QR  F+++ + K    +E  P DE F   L   +P ++G  +G DRL M +   NNI
Sbjct: 474 PITQRDCFKQQQKAKDLGDDEAQPPDEAFCTALEYGLPPTAGWGIGIDRLTMFLADKNNI 533

Query: 340 NEVIWTPFSQSNQE 353
            EVI+ P  +   +
Sbjct: 534 KEVIFFPTMRPLND 547


>gi|256375052|ref|YP_003098712.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255919355|gb|ACU34866.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 1094

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 163/367 (44%), Gaps = 30/367 (8%)

Query: 1    MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     + +   R+R             L  R+ +  ++R++  +  ++E+++ 
Sbjct: 737  LHPLPDRRAGLADPEARVRKRYLDLAVNPDSAAMLRTRSAVVRAVRDFLHDRGYLEVETP 796

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     +YL+ +PE   K+L  AG +++F     +RN 
Sbjct: 797  MLQTVHGGA-NARPFVTHI---NAYDTRMYLRIAPELYLKRLCVAGVDRVFELNRNFRNE 852

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV-NCNPFSEPE 166
                 H PEFTMLE Y+A+  Y  ++     +++ AA  A+ +  + ++    +   E  
Sbjct: 853  GADATHNPEFTMLEAYQAYADYRVMLDLVRELVQHAAVAAHGRQVAVRDGAEVDISGEWP 912

Query: 167  YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIE 224
             + V  A +    + +G  L          L       G+ +  D       +  R    
Sbjct: 913  VVPVHAAVSTALGVQVGPDLP------LDELRAALVAGGVPLPEDLEADHGTLVLRAYDH 966

Query: 225  KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             +EP       T    +P   S L   + ADPR  +R++L A   E+  A  EL DP+EQ
Sbjct: 967  LVEP--ATTAPTFYTDFPTSVSPLTREHRADPRLAERWDLVAFGAEVGTAYSELTDPVEQ 1024

Query: 285  RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
            R R E +  +      E   +DEDFLA L   M  + G+ +G DRL+M++TGA +I + +
Sbjct: 1025 RRRLEAQSLKAASGDVEAMELDEDFLAALEHGMAPTGGLGLGVDRLLMMLTGA-SIRQTV 1083

Query: 344  WTPFSQS 350
              PF + 
Sbjct: 1084 LFPFVRP 1090


>gi|160901648|ref|YP_001567229.1| lysyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160359292|gb|ABX30906.1| lysyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 502

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 157/365 (43%), Gaps = 30/365 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R             L  R +I   +REY     F+E+++ 
Sbjct: 136 IRPLPEKWHGLKDKEVRYRQRYVDMIANDDTIKTLRTRFLIIKYIREYLNNKGFLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + R F T L   +     +YL+ + E   K+L+  G EK++     +RN 
Sbjct: 196 VLQSIMGGA-NARPFITHL---NVYDIDMYLRIATELHLKRLVVGGMEKVYEIGKIFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A   Y  +M+   +++    +  + K    +Q    +     +
Sbjct: 252 GVSNKHNPEFTSIELYQAFADYNDMMELTEDLLYNITKKVHNKAKIMYQGEEIDFTPPFK 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I + E       ID+    D         L    +  G  V  +D +     ++    +
Sbjct: 312 RIKMREFIQENLGIDIVEASD-------QELKEFLKNKGEEVEIEDRY-HYLDKVWD-LV 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  YP   S LA     DPR T+RFEL     E+ NA  EL DP +Q  
Sbjct: 363 EDK--IVQPTFVMDYPIELSPLAKRKKDDPRLTERFELIIKGNEIANAFSELNDPQDQFE 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+K+M+ K+    E   +D DF+  L   +P + G+ +G DR+ ML+T    I ++I  
Sbjct: 421 RFKKQMELKELGDEEAQMMDLDFIRALEYGLPPTGGLGIGIDRVCMLLTDTPTIRDIIPF 480

Query: 346 PFSQS 350
           P  + 
Sbjct: 481 PIVKP 485


>gi|297171664|gb|ADI22658.1| lysyl-tRNA synthetase (class II) [uncultured Gemmatimonadales
           bacterium HF0500_22O06]
          Length = 508

 Score =  303 bits (776), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 91/380 (23%), Positives = 158/380 (41%), Gaps = 41/380 (10%)

Query: 1   MHQIP---------------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLRE 34
           +  +P                  + + +  YR+R                R  I  +LR 
Sbjct: 142 LRPLPFGKTEENTETGERIEHSGFSDPETRYRQRYADLAVHPALRNVFETRTKIIRALRG 201

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +     F+E+++  LQ   G  +  + F T     + +   +YL+ + E   K+LL  G 
Sbjct: 202 FLDSENFLEVETPVLQPLYGGAS-AKPFVTH---HEALGLTMYLRIADELYLKRLLVGGL 257

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
           ++++  +  +RN     +H PEFTMLEWY+A   Y   M     ++    +         
Sbjct: 258 DRVYEISKDFRNEGLSRVHNPEFTMLEWYQAFTDYNDQMVLVERMVGHVLDEVVSSRELR 317

Query: 155 QNVNCNPF-SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
                  F      I +  A +    +D+    D        +L  +A+  G+       
Sbjct: 318 YGNEMFSFEPPFPRIPLVGALSEALGVDVFHLED-------EVLREKAKALGLDDLDTAG 370

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
              +  ++    +EP   +   T +  +P   S LA  + +D R T+RFELY   +ELCN
Sbjct: 371 RGKLIDKLFGALVEP--DLVQPTFVIDHPKELSPLAKEHRSDSRLTERFELYVGRVELCN 428

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              EL DP++QR RFE +   +    +E   ID+D++  L   MP + G+ +G DR VM+
Sbjct: 429 GFSELNDPLDQRARFEAQAGLRDAGDDEAQQIDDDYVRALEYGMPPTGGVGLGVDRFVMM 488

Query: 333 VTGANNINEVIWTPFSQSNQ 352
           +T   +I +VI  P  +  +
Sbjct: 489 ITDQPSIRDVILFPILRPEE 508


>gi|148377884|ref|YP_001256760.1| lysyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291930|emb|CAL59321.1| Lysyl tRNA synthetase [Mycoplasma agalactiae PG2]
          Length = 489

 Score =  303 bits (776), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 88/363 (24%), Positives = 158/363 (43%), Gaps = 28/363 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YRRR              + R  I   ++EYF    ++E+++ 
Sbjct: 136 LKPLPEKYHGLVDTEERYRRRWVDLITNEESKNKFILRTKIIKWIKEYFDNLDYLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         + F+T     + + +   L+ + E   KK +  G E+++     +RN 
Sbjct: 196 FLQDYVSGAA-AKPFTTH---HNSLNQEFVLRIATEIPLKKCVVGGLERVYELGRIFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+ + E +M     + +   +   + +F       +     + 
Sbjct: 252 GYDTTHNPEFTTIEFYEAYSNVEGMMDRTEELFKVLCQKLGKSVFVNNGTEVDLSKPFKR 311

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I + +A       D                 L+A++  I++    T   I + +  E +E
Sbjct: 312 INMVDAVNEKTGKDFKNIS-------LDEAILEAKKHNIKIEKFWTTGHIINALYEELVE 364

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +  +   T +  +P   S L+    +DPRFT+R EL+    E  N   EL DPI+Q  R
Sbjct: 365 SS--LIQPTFIYGHPIEVSPLSA-KASDPRFTERAELFINTKEYANMYTELSDPIDQLER 421

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+ ++ EKK   +E   ID DF+  L   MP + G  +G DRL+ML+T  ++I +V+  P
Sbjct: 422 FKSQIDEKKAGNDEASDIDWDFVDALEYGMPPTGGCGIGIDRLIMLLTETSSIRDVLLFP 481

Query: 347 FSQ 349
             +
Sbjct: 482 TLK 484


>gi|88603737|ref|YP_503915.1| lysyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|121725410|sp|Q2FSN8|SYK_METHJ RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|88189199|gb|ABD42196.1| lysyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 505

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 159/364 (43%), Gaps = 29/364 (7%)

Query: 4   IPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +       +  YR+R                R+ I S LR Y     F+E ++ +LQ
Sbjct: 142 LPEKFHGLTNLEKRYRQRYLDLIVNEESRETFRTRSRIISLLRNYLTGQGFLEFETPTLQ 201

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G   + R F+T     + + + LYL+ +PE   K+L+  G EK+F  A  +RN +  
Sbjct: 202 PLYGGA-NARPFTT---FHNFLGQKLYLRIAPELYLKRLVVGGFEKVFEVAKNFRNEDID 257

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYIT 169
             H PEF+M+E Y+A+  Y  +MK    II             +F+    +  +    ++
Sbjct: 258 TSHNPEFSMVEIYQAYADYTDMMKLTEGIISSIVHEVTGSYEVAFEENTISYKAPWTVMS 317

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-SDIFSRILIEKIEP 228
           + EA      +D+          D   L    ++ G+    D     ++        +E 
Sbjct: 318 MEEAVRTIGKVDIFAH-------DLESLKKIGKEKGVDGIDDVHTQREMLVLFFEALVED 370

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S LA  +     F +RFEL+   +EL N   EL DP++Q  RF
Sbjct: 371 K--LIQPTFITDFPVENSPLAKSHREKEGFVERFELFIAGMELANGFSELNDPLDQMERF 428

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E + ++++    E    D DF+  L   MP + G+ +G DRLVML+TG  +I EVI  P 
Sbjct: 429 EAQEEKRRLGDEEAQMHDYDFVNALGYGMPPTGGVGIGIDRLVMLITGNTSIKEVILFPS 488

Query: 348 SQSN 351
            +  
Sbjct: 489 MKRE 492


>gi|15964029|ref|NP_384382.1| putative lysyl-tRNA synthetase protein [Sinorhizobium meliloti
           1021]
 gi|307301175|ref|ZP_07580937.1| tRNA synthetase class II (D K and N) [Sinorhizobium meliloti
           BL225C]
 gi|307321076|ref|ZP_07600481.1| tRNA synthetase class II (D K and N) [Sinorhizobium meliloti AK83]
 gi|15073205|emb|CAC41713.1| Putative lysyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306893248|gb|EFN24029.1| tRNA synthetase class II (D K and N) [Sinorhizobium meliloti AK83]
 gi|306903631|gb|EFN34218.1| tRNA synthetase class II (D K and N) [Sinorhizobium meliloti
           BL225C]
          Length = 350

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 199/348 (57%), Positives = 251/348 (72%), Gaps = 1/348 (0%)

Query: 4   IP-SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           +P + PWW  D H  RRPFL+ RN IQS+LR +F E  FIE+D+ +LQ SPGNE H+ AF
Sbjct: 1   MPHASPWWTPDVHADRRPFLIGRNRIQSALRRFFDERDFIEVDTAALQVSPGNEAHLHAF 60

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           +TE +  D   +PLYL TSPEF+CKKL+AAGE +I CFAH +RN E+G LH PEFTMLEW
Sbjct: 61  ATEALGLDGSVQPLYLHTSPEFACKKLIAAGERRIACFAHVYRNRERGPLHHPEFTMLEW 120

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YRA E YE LM DC  I+  AAE    +   +Q   C+PF+EPE ++VAEAFAR+A +DL
Sbjct: 121 YRAEEGYETLMHDCGEILALAAETVAARSLVYQGHECDPFAEPERLSVAEAFARFAGLDL 180

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             ++      DR  L    ++AG+RVA DD+W+D+FSR+L+E+IEPNLG    TILD YP
Sbjct: 181 LASVQEDGSTDRESLAAAMREAGLRVAGDDSWADLFSRVLVERIEPNLGFGRATILDEYP 240

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
             E+ALA    ADPR  +RFELYAC +EL NA  EL D  EQR RFE EM EK ++Y ET
Sbjct: 241 VAEAALARPAAADPRVAERFELYACGVELANAFGELTDAAEQRRRFELEMAEKARVYGET 300

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           YPIDEDFLA L  MP++SGIA+GFDRLVML TGA+ I++V+W P +++
Sbjct: 301 YPIDEDFLAALAGMPEASGIALGFDRLVMLATGASRIDQVLWAPVAEA 348


>gi|291320609|ref|YP_003515874.1| Lysyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752945|emb|CBH40920.1| Lysyl tRNA synthetase [Mycoplasma agalactiae]
          Length = 489

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 88/363 (24%), Positives = 158/363 (43%), Gaps = 28/363 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YRRR              + R  I   ++EYF    ++E+++ 
Sbjct: 136 LKPLPEKYHGLVDTEERYRRRWVDLITNEESKNKFILRTKIIKWIKEYFDNLDYLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         + F+T     + + +   L+ + E   KK +  G E+++     +RN 
Sbjct: 196 FLQDYVSGAA-AKPFTTH---HNSLNQEFVLRIATEIPLKKCVVGGLERVYELGRIFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+ + E +M     + +   +   + +F       +     + 
Sbjct: 252 GYDTTHNPEFTTIEFYEAYSNVEGMMDRTEELFKVLCQKLGKSVFVNNGTEVDLSKPFKR 311

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I + +A       D                 L+A++  I++    T   I + +  E +E
Sbjct: 312 INMVDAVNEKTGRDFRNIS-------LDEAILEAKKHNIKIEKFWTTGHIINALYEELVE 364

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +  +   T +  +P   S L+    +DPRFT+R EL+    E  N   EL DPI+Q  R
Sbjct: 365 SS--LIQPTFIYGHPIEVSPLSA-KASDPRFTERAELFINTKEYANMYTELSDPIDQLER 421

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+ ++ EKK   +E   ID DF+  L   MP + G  +G DRL+ML+T  ++I +V+  P
Sbjct: 422 FKSQIDEKKAGNDEASDIDWDFVDALEYGMPPTGGCGIGIDRLIMLLTETSSIRDVLLFP 481

Query: 347 FSQ 349
             +
Sbjct: 482 TLK 484


>gi|296439735|sp|B8ZRJ4|LYSX_MYCLB RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|296439736|sp|Q9CC23|LYSX_MYCLE RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
          Length = 1133

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 153/370 (41%), Gaps = 27/370 (7%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R R             ++ R+ +  S+RE      F+E+++ 
Sbjct: 770  LRPLPNKWKGLTDPEARVRTRYVDLAVNTESRNLIMARSCVLRSVREMLFAKGFVEVETP 829

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F+T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 830  ILQQIHGGAT-ARPFATRI---NTYDMDLFLRIAPELYLKRLCIGGVERVFELGRAFRNE 885

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV------NCNP 161
                 H PEFT+LE Y+AH  Y   +  C  +I+ AAE AN      +          N 
Sbjct: 886  GVDFSHNPEFTLLEAYQAHADYLMWIDGCRELIQNAAEAANGTQTLMRPRIEGASGTANH 945

Query: 162  FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                +   V      Y  +            +   L   +  A I          +  ++
Sbjct: 946  LEPIDISGVWPVKTVYEAVSEALGECVDTSTELATLRKLSDAAHIPYWPHWDTGAVVLKL 1005

Query: 222  LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
                +E     +  T    +P   S L   + + P   +R++L A  IEL  A  EL DP
Sbjct: 1006 YEHLVE--NRTDQPTFYIDFPTSVSPLTRPHRSKPGVAERWDLVAWGIELGTAYSELTDP 1063

Query: 282  IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +EQR R  ++         E   +DEDFL  +   MP + G+ MG DRLVML+TG  +I 
Sbjct: 1064 VEQRRRLHEQSLLAVGGNPEAMELDEDFLQAMEYAMPPTGGLGMGIDRLVMLITG-RSIR 1122

Query: 341  EVIWTPFSQS 350
            E +  P ++ 
Sbjct: 1123 ETLPFPLAKP 1132


>gi|241998236|ref|XP_002433761.1| lysyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215495520|gb|EEC05161.1| lysyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 580

 Score =  303 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 80/362 (22%), Positives = 151/362 (41%), Gaps = 28/362 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  +R+R              + R+ + + +R++F    F+E+++ 
Sbjct: 216 LHMLPHLHFGLKDKETRFRQRYLDLIMNENVRQKFIMRSKVVNYVRKFFDSMGFLEVETP 275

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 276 MMNMIPGGAT-AKPFITH---HNELDMDLYMRVAPELYLKMLVVGGMDRVYEIGRQFRNE 331

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--------NC 159
                H PEFT  E+Y A+  Y  LM     ++    +          +           
Sbjct: 332 GIDLTHNPEFTTCEFYMAYADYNDLMDMTEVMLSGMVKSLTGSYKVTYHPDGPDGEAVEI 391

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       + +     +     L +  +        LL     +  +      T + +  
Sbjct: 392 DFTPPFRRVRMLPDLEKALGTPLPSPENLSSPESTSLLSELCVKHQVECTPPRTPARLLD 451

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++   +E        T L  +P   S L+  + +    T+RFEL+    E+ NA  EL 
Sbjct: 452 KLVGHFLEEQFV--NPTFLCDHPEVMSPLSKWHRSVKGLTERFELFIARKEVVNAYTELN 509

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR RFE++ ++K    +E   +DE F   L   +P ++G  MG DRLVM +T +NN
Sbjct: 510 DPLVQRQRFEQQAKDKAAGDDEAQLVDETFCTSLEYGLPPTAGWGMGLDRLVMFLTDSNN 569

Query: 339 IN 340
           I 
Sbjct: 570 IK 571


>gi|326511347|dbj|BAJ87687.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 582

 Score =  303 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 99/388 (25%), Positives = 161/388 (41%), Gaps = 42/388 (10%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + S +R+      FIE+++ 
Sbjct: 201 LLPLPDKYHGLTDVDKRYRQRYIDMIANPEVADVFRTRSKVVSEIRKTMESFGFIEVETP 260

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + +++ LYL+ + E   K++L  G EK++     +RN 
Sbjct: 261 VLQGAAGGA-EARPFITH---HNSLQRDLYLRIATELHLKRMLVGGLEKVYEIGRIFRNE 316

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI-IRCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  YE +M     I IRCA     +    +Q    +      
Sbjct: 317 GISTRHNPEFTTIEMYEAYSDYESMMNLAEEIVIRCAMATTGKLKIDYQGTEISLERPWR 376

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ---QAGIRVAHDDTWSDIFSRILI 223
             T+         +D  +  D     +     L  +        +    +   + + +  
Sbjct: 377 RETMHRLVEEATGVDFNSFGDVESAKNAAKGLLGFKTESSENTSLQACSSVGHVLNEVFE 436

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             +E    +   T +  YP   S LA  +      T+RFEL+ C  E+ NA  EL DPI+
Sbjct: 437 TVVEST--LVQPTFVLDYPVEISPLAKPHRRYAGLTERFELFVCGREIGNAFSELTDPID 494

Query: 284 QRHRFEKEMQEKKK---------------IYNE---TYPIDEDFLACLT-EMPQSSGIAM 324
           QR+RFE ++++                    +E      +DEDFL  L   MP +SG+ +
Sbjct: 495 QRNRFENQIKQHNAKRAAMDKKVKSDESKGDDEYSYEVSLDEDFLTSLEYGMPPASGMGL 554

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           G DRLVML+T + +I +VI  P  +  Q
Sbjct: 555 GIDRLVMLLTNSASIRDVIAFPVLKLQQ 582


>gi|15827728|ref|NP_301991.1| lysyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230205|ref|YP_002503621.1| lysyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13093279|emb|CAC31774.1| C-term lysyl-tRNA synthase [Mycobacterium leprae]
 gi|219933312|emb|CAR71488.1| C-term lysyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 1039

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 153/370 (41%), Gaps = 27/370 (7%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R R             ++ R+ +  S+RE      F+E+++ 
Sbjct: 676  LRPLPNKWKGLTDPEARVRTRYVDLAVNTESRNLIMARSCVLRSVREMLFAKGFVEVETP 735

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F+T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 736  ILQQIHGGAT-ARPFATRI---NTYDMDLFLRIAPELYLKRLCIGGVERVFELGRAFRNE 791

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV------NCNP 161
                 H PEFT+LE Y+AH  Y   +  C  +I+ AAE AN      +          N 
Sbjct: 792  GVDFSHNPEFTLLEAYQAHADYLMWIDGCRELIQNAAEAANGTQTLMRPRIEGASGTANH 851

Query: 162  FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                +   V      Y  +            +   L   +  A I          +  ++
Sbjct: 852  LEPIDISGVWPVKTVYEAVSEALGECVDTSTELATLRKLSDAAHIPYWPHWDTGAVVLKL 911

Query: 222  LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
                +E     +  T    +P   S L   + + P   +R++L A  IEL  A  EL DP
Sbjct: 912  YEHLVE--NRTDQPTFYIDFPTSVSPLTRPHRSKPGVAERWDLVAWGIELGTAYSELTDP 969

Query: 282  IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +EQR R  ++         E   +DEDFL  +   MP + G+ MG DRLVML+TG  +I 
Sbjct: 970  VEQRRRLHEQSLLAVGGNPEAMELDEDFLQAMEYAMPPTGGLGMGIDRLVMLITG-RSIR 1028

Query: 341  EVIWTPFSQS 350
            E +  P ++ 
Sbjct: 1029 ETLPFPLAKP 1038


>gi|291530007|emb|CBK95592.1| Lysyl-tRNA synthetase (class II) [Eubacterium siraeum 70/3]
          Length = 649

 Score =  302 bits (774), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 100/360 (27%), Positives = 158/360 (43%), Gaps = 28/360 (7%)

Query: 6   SQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +    +D    YR+R              +KR+MI   +R +     ++E+D+  L   
Sbjct: 154 EKWHGLKDKEERYRKRYLDLIANPEIKDTFVKRSMILREIRSFLDSKGYLEVDTPVLHTL 213

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
                  R F T     + +   +YL+   E   K+L+  G ++++     +RN      
Sbjct: 214 EIGAA-ARPFVTH---HNALDIDMYLRIETELYLKRLIVGGFDRVYEVGRIFRNEGMDAT 269

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPEYITVA 171
           H PEFT +E Y+A+  Y  +M     + R  A +V       +Q          + +T+ 
Sbjct: 270 HNPEFTSIEMYQAYTDYYGMMDLIEEMYRTVALKVCGTDTVPYQGNEIEIGKPWKRVTMK 329

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           EA   Y  +D  +   + D         QA+     +A   T  ++   +  E +E    
Sbjct: 330 EAVKEYTGLDYDSWTSDAD------AVAQAKTKHAEIADTATKGEVLIELFEEFVEEK-- 381

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   TI+  YP   S LA   P DP FT+RFE +    E  NA  EL DPI+QR RF K+
Sbjct: 382 LIQPTIIYDYPVENSPLAKRKPTDPAFTERFEYFINACEFGNAFSELNDPIDQRERFTKQ 441

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + EK+K       IDEDFL  L   +P + G+ MG DR VML+T + +I +V+  P  + 
Sbjct: 442 VMEKRKQGANAQ-IDEDFLTALEYGLPPTGGLGMGLDRFVMLLTDSASIRDVLLFPTMKP 500


>gi|262200161|ref|YP_003271369.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|296439659|sp|D0LB45|LYSX_GORB4 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|262083508|gb|ACY19476.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 1138

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 88/364 (24%), Positives = 148/364 (40%), Gaps = 21/364 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     + +   R+R             L  R+++  +LR++  +  F+E+++ 
Sbjct: 779  LRPLPDKWSGLTDPEARVRQRYVDLAINPRSRELLATRSVVVKALRDFLADRGFMEVETP 838

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   +   F T +   +     LYL+ +PE   K+L   G EK+F     +RN 
Sbjct: 839  ILQQIHGGA-NATPFQTHI---NAYNLDLYLRIAPELYLKRLCVGGVEKVFEIGRNFRNE 894

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT LE Y AH  Y +++     +I+ AA  A+ +    +  +       + 
Sbjct: 895  GVDFSHNPEFTSLEAYAAHSDYLKMLDLTREMIQHAATAAHGEPVIIRVDDEGNEQRVDI 954

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +  G  ++     +   L     +  I    D     I   +     E
Sbjct: 955  SGDWPVRTVHEVVSEGAGVEITSDTEVSELRGICDRLEIAYRPDWDAGQIVLELYEHLGE 1014

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R
Sbjct: 1015 DR--TTVPTFYTDFPTSTSPLTRAHRSKPGVAERWDLVAWGVELGTAYTELTDPVEQRKR 1072

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               +         E   +DEDFL  L   MP + G+ +G DR+VML+TG  +I E +  P
Sbjct: 1073 LTAQSILAADGDPEAMELDEDFLTALEYAMPPTGGLGVGVDRVVMLITGQ-SIRESLAFP 1131

Query: 347  FSQS 350
              + 
Sbjct: 1132 MVKP 1135


>gi|187250480|ref|YP_001874962.1| lysyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186970640|gb|ACC97625.1| Lysyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 498

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 169/364 (46%), Gaps = 22/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  +R R              +KR+ I SS+R+      ++E+++ 
Sbjct: 139 IRPMPEKWHGVQDTEIRFRNRHVDLIANEDIKEIFVKRSKIISSIRKTLDGLGYLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G     R F T     + ++ PLY++ + E   K+L+  G ++I+     +RN 
Sbjct: 199 TLTPDAGGAI-ARPFET---FHNALKMPLYMRIALELYHKRLIVGGLDRIYEIGKMFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E Y+A+     +      ++  AAE    +  +F+    N     E 
Sbjct: 255 GIDTTHNPEFTMMELYQAYGDVNTMADVFEAVLANAAEAIGAEKVTFKGKEVNLKPPYER 314

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +++ EA+ +Y   D+   LD  D   R  L   A++ G++V  +++   IF  I  E+I 
Sbjct: 315 VSMPEAWQKYVGEDIHNILDGRDFK-RAELIALAKRLGLKVDEEESSGKIFDMIFDERI- 372

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
             +      ++  YP   S  +     D    +RFE + C  EL NA  E+ DP +Q  R
Sbjct: 373 -IVNYTNPMLMMDYPTAVSPFSKTKEGDSAIVERFEAFVCGSELGNAYTEINDPADQAQR 431

Query: 288 FEKEMQEKKKIYNETYPI-DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            + +  +K K   +   I D  ++  L   MP + G+ +G DR++ML+TG ++I E+++ 
Sbjct: 432 LKDQAAQKAKDNEDNSEIVDTAYIEALESGMPPTGGMGIGIDRMIMLLTGQDSIREIVFF 491

Query: 346 PFSQ 349
           P  +
Sbjct: 492 PLLK 495


>gi|326927622|ref|XP_003209990.1| PREDICTED: lysyl-tRNA synthetase-like [Meleagris gallopavo]
          Length = 596

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 80/363 (22%), Positives = 148/363 (40%), Gaps = 28/363 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R  I + +R +  E  F+EI++ 
Sbjct: 210 LHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIVTYIRSFLDELGFLEIETP 269

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 270 MMNIIPGGAM-AKPFIT---YHNELDMKLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNE 325

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++    +          +           
Sbjct: 326 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQAYEI 385

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       +++ +   +   +   +T     +  R           +      T + +  
Sbjct: 386 DFTPPFRRMSMVDELEKTLGVKFPSTESFETEETRRFFDDLCAVRNVECPPPRTTARLLD 445

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  +      T+RFEL+    E+CNA  EL 
Sbjct: 446 KLVGEFLEVTC--INPTFICDHPQIMSPLAKWHRVHRGLTERFELFVMKKEVCNAYTELN 503

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +QR  FE + + K    +E   IDE+F   L   +P ++G  MG DR  M +T ++N
Sbjct: 504 DPFQQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRFAMFLTDSSN 563

Query: 339 INE 341
           I +
Sbjct: 564 IKQ 566


>gi|330008638|ref|ZP_08306291.1| putative lysine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328535090|gb|EGF61607.1| putative lysine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 312

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 86/323 (26%), Positives = 150/323 (46%), Gaps = 13/323 (4%)

Query: 32  LREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
           +R++ V   F+E+++  +Q  PG  +  R F T     + +   +YL+ +PE   K+L+ 
Sbjct: 1   MRQFMVARGFMEVETPMMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVV 56

Query: 92  AGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQK 150
            G E++F     +RN      H PEFTM+E Y A+  Y+ L++   ++ R  A+    + 
Sbjct: 57  GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKT 116

Query: 151 IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH 210
              + +   +     E +T+ EA  ++         +  D  +       A+  GI+V  
Sbjct: 117 EVPYGDQVFDFGKPFEKLTMREAIKKH-----RPETNMADLDNFDAAKALAESIGIQVEK 171

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
                 I + I  E  E +  +   T +  YPA  S LA     +P  T RFE +    E
Sbjct: 172 SWGLGRIVTEIFDEVAEAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGRE 229

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRL 329
           + N   EL D  +Q  RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+
Sbjct: 230 IGNGFSELNDAEDQAQRFQDQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRM 289

Query: 330 VMLVTGANNINEVIWTPFSQSNQ 352
           VML T ++ I +VI  P  +  +
Sbjct: 290 VMLFTNSHTIRDVILFPAMRPQK 312


>gi|82915420|ref|XP_729064.1| lysyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23485895|gb|EAA20629.1| lysyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 579

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 157/371 (42%), Gaps = 28/371 (7%)

Query: 1   MHQIPSQP-WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P +    + +  YR+R              + R  I + LR +     FIE+++ S
Sbjct: 214 LHMLPMKYGLKDTEIRYRQRYLDLLINESTRNVFITRTKIINFLRNFLNNQGFIEVETPS 273

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G  +  R F T     + +   LYL+ + E   K L+  G ++++     +RN  
Sbjct: 274 MNLMAGGAS-ARPFITH---HNDLDLDLYLRIATELPLKMLIVGGLDRVYEIGKVFRNEG 329

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA--------NQKIFSFQNVNCN 160
               H PEFT  E+Y A+  Y  L+K                     N+       +  +
Sbjct: 330 IDNTHNPEFTSCEFYWAYADYYDLIKWSEEFFSKLVYHLFGSYKILYNKDGPENDPIEID 389

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  I++ E   +   + L    D+P+  ++  +    ++  I + +  T + +  +
Sbjct: 390 FTPPYPKISLVEELEKITKVKLDQPFDSPETINK--MINIIKENNIEMPNPPTAAKLLDQ 447

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +    IE N+  N    +  +P   S LA  + + P  T+R E++ C  E+ NA  EL D
Sbjct: 448 LASHFIE-NIYQNQPFFIIEHPQIMSPLAKYHRSKPGLTERLEMFICGKEVLNAYTELND 506

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P +Q+  F  + ++K+K   E +  D  F   L   +P + G+ +G DR+ M +T  N+I
Sbjct: 507 PFKQKECFASQQKDKEKGDTEAFHCDAAFCTSLEYGLPPTGGLGLGIDRITMFLTNKNSI 566

Query: 340 NEVIWTPFSQS 350
            +VI  P  + 
Sbjct: 567 KDVILFPTMKP 577


>gi|319760399|ref|YP_004124337.1| lysyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039113|gb|ADV33663.1| lysyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 515

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 100/371 (26%), Positives = 162/371 (43%), Gaps = 30/371 (8%)

Query: 1   MHQIPSQPWWN--RDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +PS+ +     +  YR+R               KR++I   +R++  +  FIE+++ 
Sbjct: 155 LRPLPSKFYGLNNSEKKYRQRYLDLIVNDKSSKIFKKRSLIIYKIRQFMKKYDFIEVETP 214

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     R F T     + +   +YL+ +PE   KKL+  G E+IF     +RN 
Sbjct: 215 IMHTIPGGAI-ARPFVT---YHNKLGMHMYLRIAPELYLKKLIIGGFERIFEINRNFRNE 270

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E Y A+  Y+ ++     ++   AE   +         C  F EP  
Sbjct: 271 SISPYHNPEFTMMEVYIAYSDYKDMISFTQKLLSKLAEQIFKSNTIQYGEYCLNFKEP-- 328

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
               +   + A I     +   +  D  ++    ++  I+     +   +   +  E I 
Sbjct: 329 --FTKMSVKEAIIYYLPEVKLNNINDMSIIVDILKKFEIQFNKKWSLEKLHMLLFEEIIT 386

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               I   T +  YP   S LA     D +   RFEL+    E+ N   EL DP +QR R
Sbjct: 387 KK--IIQPTFITHYPTELSPLARCNDNDSKLADRFELFIAGFEIGNGFSELNDPDDQRDR 444

Query: 288 FEKEMQEKKKIY------NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           F K++QEK+         +  +  DED+L  L   +P +SGI +G DRLVML+T  +NI 
Sbjct: 445 FLKQIQEKRMNSKNTDNTDIVHCYDEDYLTALEYGLPPTSGIGIGIDRLVMLLTNQHNIR 504

Query: 341 EVIWTPFSQSN 351
           +VI  P  +  
Sbjct: 505 DVILFPTLRPK 515


>gi|326491949|dbj|BAJ98199.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 571

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 84/342 (24%), Positives = 147/342 (42%), Gaps = 17/342 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R     R+ I S +R++  E   +E+++  +   PG  +  + F T     + +    Y+
Sbjct: 235 RHIFRTRSKIISFIRKFLDERNLLEVETPMMNLIPGGAS-AKPFVTH---HNELNMDQYM 290

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + +PE   K+L+  G ++++     +RN      H PEFT  E+Y A+  Y  LM+    
Sbjct: 291 RIAPELHLKELVVGGLDRVYEIGKEFRNEGFDLTHSPEFTGCEFYMAYADYNDLMELTEI 350

Query: 139 IIRCAAEVANQKIFSFQN--------VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           I+               +        +  +       I + +     A +D+   LD   
Sbjct: 351 ILSSMVMELTGSTKIKYHANGADNPPIEIDFTPPYRRIDMMQELKSVAGLDIP--LDLSS 408

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                 L    ++ GI+ +   T + +  +I    +E        T +  +P   S LA 
Sbjct: 409 DEANQYLAATCEKYGIKCSPPQTTARLLDKITGHFLEATCV--NPTFIINHPEIMSPLAK 466

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
            +      T+RFEL+    E+CNA  EL DP+ QR RFE +++ ++   +E   +DE F 
Sbjct: 467 WHRTQSGLTERFELFINKHEVCNAYTELNDPLVQRQRFEDQLRSRQSGDDEAMALDEAFC 526

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
             L   +P + G  MG DR+ ML+T + NI EV+  P  +  
Sbjct: 527 TALEYALPPTGGWGMGIDRIAMLLTDSQNIKEVLLFPTMKPQ 568


>gi|149699380|ref|XP_001501660.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 3 [Equus caballus]
          Length = 423

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 86/361 (23%), Positives = 149/361 (41%), Gaps = 56/361 (15%)

Query: 8   PWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPG 54
            +   +++  YR+R              + R+ I + +R +  E  F+EI++  +   PG
Sbjct: 85  HFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPG 144

Query: 55  NETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQ 114
                + F T     + +   LY++ +PE   K L+  G ++++     +RN      H 
Sbjct: 145 GAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHN 200

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           PEFT  E+Y A+  Y  LM+    +I                                  
Sbjct: 201 PEFTTCEFYMAYADYHDLMEITEKMIS--------------------------------- 227

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                + L  T     +  R +L       G+      T + +  +++ E +E       
Sbjct: 228 ---GMVKLPETNLFETEETRKILDDICVAKGVECPPPRTTARLLDKLVGEFLEVTC--IN 282

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  +P   S LA  + +    T+RFEL+    E+CNA  EL DP+ QR  FE++ + 
Sbjct: 283 PTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKA 342

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NNI EV+  P  +   +
Sbjct: 343 KAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMKPEDK 402

Query: 354 E 354
           +
Sbjct: 403 K 403


>gi|68071131|ref|XP_677479.1| lysine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56497613|emb|CAH98977.1| lysine--tRNA ligase, putative [Plasmodium berghei]
          Length = 516

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 158/371 (42%), Gaps = 28/371 (7%)

Query: 1   MHQIPSQP-WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P +    + +  YR+R              + R  I + LR +  +  F+E+++ S
Sbjct: 151 LHMLPMKYGLKDTEIRYRQRYLDLLINESTRNVFITRTKIINFLRNFLNDQGFMEVETPS 210

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G  +  R F T     + +   LYL+ + E   K L+  G +K++     +RN  
Sbjct: 211 MNLMAGGAS-ARPFITH---HNDLDLDLYLRIATELPLKMLIVGGLDKVYEIGKVFRNEG 266

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA--------NQKIFSFQNVNCN 160
               H PEFT  E+Y A+  Y  L+K   N                 N+       +  +
Sbjct: 267 IDNTHNPEFTSCEFYWAYADYYDLIKWSENFFSKLVYHLFGSYKILYNKDGPEKDPIEID 326

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  I++ E   +   + L    D+ +  ++  +    ++  I + +  T + +  +
Sbjct: 327 FTPPYPKISLVEELEKITKVKLEQPFDSTETINK--MINIIKENNIEMPNPPTAAKLLDQ 384

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +    IE N+  N    +  +P   S LA  + + P  T+R E++ C  E+ NA  EL D
Sbjct: 385 LASHFIE-NIYQNKPFFIIEHPQIMSPLAKYHRSKPGLTERLEMFICGKEVLNAYTELND 443

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P +Q+  F  + ++K+K   E +  D  F   L   +P + G+ +G DR+ M +T  N+I
Sbjct: 444 PFKQKECFSAQQKDKEKGDTEAFHCDAAFCTSLEYGLPPTGGLGLGIDRITMFLTNKNSI 503

Query: 340 NEVIWTPFSQS 350
            +VI  P  + 
Sbjct: 504 KDVILFPTMKP 514


>gi|15805401|ref|NP_294095.1| lysyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|11387155|sp|Q9RXE1|SYK_DEIRA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|6458049|gb|AAF09951.1|AE001897_4 lysyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 525

 Score =  301 bits (772), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 155/370 (41%), Gaps = 29/370 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +PS+     + +   RRR                R+ +   +R    E  F+E++  
Sbjct: 155 LHPLPSKFHGLQDEELRARRRYVDLMVTEGAREKFQARSRMIRYIRNELDERGFMEVEGP 214

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +LQ + G     R F T     + +     L+ S E   K+LL  G E+++     +RN 
Sbjct: 215 TLQVTAGGA-EARPFMTH---HNALSYDFKLRISLELYLKRLLVGGFERVYEIGRVYRNE 270

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y  + K   +++   A+  +    F +Q    +      
Sbjct: 271 GIDRTHNPEFTMLELYWAYADYSDIAKLVEDLLSGLAKEVHGSYQFEYQGKTLDFTPPFA 330

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +           +       + D  D   L     +             +  ++  E +
Sbjct: 331 RVDYL------GGLREHVPGLDFDPLDLDRLRAFCDER-FPQWKGVPSYKLLDKLFGEFV 383

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPR-FTKRFELYACNIELCNACDELLDPIEQR 285
           EP   ++  T +  +PA  S LA  + + P   T+RFE++    EL NA  EL D  +QR
Sbjct: 384 EP--LLSNPTFVMDHPAVISPLAKKHRSRPEAVTERFEVFCSGFELANAFSELNDAFDQR 441

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +   +    +E +P DEDFL  L   MP + G+ +G DRL ML+T +++I +V+ 
Sbjct: 442 ERFEAQTARQAAGDDEAHPQDEDFLLALEYGMPPAGGLGIGIDRLAMLLTDSDSIRDVLL 501

Query: 345 TPFSQSNQEE 354
            P  +    E
Sbjct: 502 FPLLRPEGGE 511


>gi|26554296|ref|NP_758230.1| lysyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|39932207|sp|Q8EUS8|SYK_MYCPE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|26454305|dbj|BAC44634.1| lysyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 489

 Score =  301 bits (772), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 86/367 (23%), Positives = 155/367 (42%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D   R R                + R  I   +R++     ++E+++ 
Sbjct: 135 LKPLPEKWHGLEDEELRARHRYVDLIVNKDSMKVFVDRIRILKIIRQFMDSQNYLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + + +  YL+ + E   KKL+  G +K++     +RN 
Sbjct: 195 VLHPILGGA-NARPFIT---FHNTLERNFYLRIATELPLKKLIVGGFDKVYEIGRIFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y A+E+ E +M+   N+ +  A+   + +            +   
Sbjct: 251 GMDSTHNPEFTSMEVYAAYENMEYMMRLTENLFKYVAKSLKKPVVKMGENEIYLTQKFRR 310

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKI 226
           I + +   +   +D      N +          A++  ++      T   I +    E  
Sbjct: 311 IHMVDFIKQETGVDFWEVKSNQE------AQELAKKHNVKFEKHQSTLGHIINLFFEEFC 364

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E        T +  +P   S L+     +P FTKRFEL+    E  NA  EL DPI+Q  
Sbjct: 365 EAKC--IQPTFVYGHPIDVSPLSKKDYKNPGFTKRFELFINTKEYANAFAELNDPIDQYE 422

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE +++EK    +E   +D DF+  L   +P ++G+ +G DR++ML T  ++I +V+  
Sbjct: 423 RFEAQVKEKSLGNDEAVEMDMDFIEALEYGLPPTAGLGVGIDRMIMLFTEKSSIRDVLLF 482

Query: 346 PFSQSNQ 352
           P  +  +
Sbjct: 483 PHMKDKK 489


>gi|281201920|gb|EFA76128.1| lysine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 539

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 85/374 (22%), Positives = 152/374 (40%), Gaps = 27/374 (7%)

Query: 1   MHQIPS--QPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   Q   +++  +R+R              + R+ +   +R Y     F+E+++ 
Sbjct: 153 LHMLPKPGQGLTDQETRFRQRYLDMIVNNNVKRNFVIRSKVIQGVRRYLDNLGFVEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   L+++ +PE   K+L+  G ++++     +RN 
Sbjct: 213 MMNMIAGGAA-AKPFVTH---HNCLNLNLFMRIAPELYLKQLVVGGMDRVYEIGKQFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +    H PEFT  E+Y A+  Y  LM     ++    E  +       + +     E E 
Sbjct: 269 DIDHTHNPEFTTCEFYMAYADYNDLMTITEEMLARIVEDIHGSKKIKYHPDGPEGKEIE- 327

Query: 168 ITVAEAFARYANIDLGTTL------DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
           I     + R   I    +              R  L  + ++  +  +   T + +  ++
Sbjct: 328 IDFTAPWRRIDMISELESHIGKIPTPYSSDECRLFLAEKCKEFKVECSAPQTTARLLDKL 387

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           +   +E        T +  +P   S LA  +   P  T+RFEL+    E CNA  EL +P
Sbjct: 388 VGHFLEVQC--INPTFIINHPEIMSPLAKHHRTIPGLTERFELFINTREACNAYTELNNP 445

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q  RFE++ + K    +E   ID  F   L   +P + G  +G DR VML+    NI 
Sbjct: 446 FTQLDRFEEQAKAKAMGDDEAQLIDNVFTTSLEYGLPPTGGWGLGVDRFVMLLCDVYNIK 505

Query: 341 EVIWTPFSQSNQEE 354
           EVI  P  +  + E
Sbjct: 506 EVILFPAMKPVKNE 519


>gi|291556890|emb|CBL34007.1| Lysyl-tRNA synthetase (class II) [Eubacterium siraeum V10Sc8a]
          Length = 503

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 99/363 (27%), Positives = 159/363 (43%), Gaps = 28/363 (7%)

Query: 6   SQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +    +D    YR+R              +KR+MI   +R +     ++E+D+  L   
Sbjct: 154 EKWHGLKDKEERYRKRYLDLIANPEIKDTFVKRSMILREIRSFLDSRGYLEVDTPVLHTL 213

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
                  R F T     + +   +YL+   E   K+L+  G ++++     +RN      
Sbjct: 214 EIGAA-ARPFVTH---HNALDIDMYLRIETELYLKRLIVGGFDRVYEVGRIFRNEGMDAT 269

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPEYITVA 171
           H PEFT +E Y+A+  Y  +M     + R  A +V       +Q          + +T+ 
Sbjct: 270 HNPEFTSIEMYQAYTDYYGMMDLIEEMYRTVALKVCGTDTVPYQGKEIEIGKPWKRMTMK 329

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           EA   Y  +D  +   + +         QA+     +A   T  ++   +  E +E    
Sbjct: 330 EAVKEYTGLDYDSWTSDAE------AVAQAKTKHAEIADTATKGEVLIELFEEFVEDK-- 381

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   TI+  YP   S LA   P DP FT+RFE +    E  NA  EL DPI+QR RF K+
Sbjct: 382 LIQPTIIYDYPVENSPLAKRKPTDPAFTERFEYFINACEFGNAFSELNDPIDQRERFTKQ 441

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + EK+K       IDEDFL  L   +P + G+ MG DR VML+T + +I +V+  P  + 
Sbjct: 442 VMEKRKQGANAQ-IDEDFLTALEYGLPPTGGLGMGLDRFVMLLTDSASIRDVLLFPTMKP 500

Query: 351 NQE 353
             +
Sbjct: 501 EVK 503


>gi|195171943|ref|XP_002026761.1| GL27002 [Drosophila persimilis]
 gi|194111700|gb|EDW33743.1| GL27002 [Drosophila persimilis]
          Length = 518

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 79/334 (23%), Positives = 143/334 (42%), Gaps = 15/334 (4%)

Query: 28  IQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCK 87
           I S +R++     F+EI++  +    G  T  + F T     + ++  L+++ +PE   K
Sbjct: 170 IISYVRQFLDRLGFLEIETPMMNMVAGGAT-AKPFVTH---HNELKMDLFMRIAPELYHK 225

Query: 88  KLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
            L+  G ++++     +RN      H PEFT  E+Y A+  Y  +M     +I    +  
Sbjct: 226 MLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYADVMDITEQLISGMVKSI 285

Query: 148 NQKIFSFQN--------VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                   +           +     + +++ +       +   +      +     L  
Sbjct: 286 RGSYKIKYHPEGPEGPEQELDFTPPFKRVSMIKTLEEKLKVQFPSAETFNTRATTDFLSQ 345

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
              +  +      T + +  +++ E IE        T +  +P   S LA  + + P  T
Sbjct: 346 LCVKHQVECPAPRTTARLLDKLVGEFIEEEC--INPTFICEHPQIMSPLAKYHRSAPGLT 403

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           +RFEL+    E+CNA  EL DP+ QR RFE++  +K    +E   +DE+F   L   +P 
Sbjct: 404 ERFELFVAKKEICNAYTELNDPVVQRERFEQQANDKAAGDDEAQMVDENFCTALEYGLPP 463

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           + G  MG DRL M +T +NNI EV+  P  +  +
Sbjct: 464 TGGFGMGIDRLTMFLTDSNNIKEVLLFPAMKPEE 497


>gi|294506912|ref|YP_003570970.1| Lysyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343240|emb|CBH24018.1| Lysyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 514

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 163/379 (43%), Gaps = 39/379 (10%)

Query: 1   MHQIP---------SQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQ 40
           +  +P              +++F YR+R               +R+ + S++R +  E  
Sbjct: 148 LRPLPVVKETEEETYYEVTDKEFRYRQRYVDLAVNEDVRGVFRQRSELISTMRRFLDEQG 207

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
            +E+++  LQ   G  +    F T     + +  PLYL+ + E   K+LL  G E ++  
Sbjct: 208 CLEVETPVLQPVYGGASAA-PFETH---HNALDMPLYLRIADELYLKRLLVGGFEGVYEI 263

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNC 159
              +RN      H PEFTM+E Y A++ Y  +M    + +R AA   +     +F+    
Sbjct: 264 GKDFRNEGLSRFHNPEFTMMECYVAYKDYRWMMDLTEDFLRTAATALHDTPTVAFEGHEI 323

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIF 218
           +       I   EA       DL     +       +  + A + G+  V  D     + 
Sbjct: 324 DFGGGWTRIPFFEAIEEATGFDLYRAGAD------RVYDVAANELGLEEVEADMGLGGLL 377

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  E +EP   +   T +  YP   S LA  +       +RFEL     E+ NA  EL
Sbjct: 378 DEIFSETVEPT--LVQPTFVTDYPIELSPLAKKHREKEGLVERFELVVAGREVANAFSEL 435

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYP----IDEDFLACLT-EMPQSSGIAMGFDRLVMLV 333
            DP +QR RFE++ +++    ++       IDED+L  L   MP ++G+ +G DRL M++
Sbjct: 436 NDPQDQRERFERQARQRAAEVDDDVDPEDLIDEDYLRALEYGMPPAAGLGVGIDRLTMIL 495

Query: 334 TGANNINEVIWTPFSQSNQ 352
           TG  +I +VI  P  +  Q
Sbjct: 496 TGQESIRDVILFPLLRPEQ 514


>gi|209550996|ref|YP_002282913.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|259511531|sp|B5ZQW5|SYK_RHILW RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|209536752|gb|ACI56687.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 497

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 165/369 (44%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I S +R +   + F+E+++ 
Sbjct: 141 LLPMPEKWHGLSDIELRYRKRHLDIMTNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETP 200

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            LQ   G  T    F T     + ++  +YL+ +PE   K+ L +G  +K+F     +RN
Sbjct: 201 MLQSIYGGAT-AEPFKTH---HNTLKLDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRN 256

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A  +     F F +   +     
Sbjct: 257 EGVSTRHNPEFTMMECYWAYADYEDMMDLVERLFETLALSIHGTTEFDFGDKQLSFKGPF 316

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + + + +A  +   ID      + +          A+ AG  V  D TW +  + I  EK
Sbjct: 317 KRVPMPDAVKQVTGIDFLAIKTDEE------ARTAAKAAGFAVEKDWTWGECLAFIFEEK 370

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   + +  +P   S  A   P +PR  +RFE Y    EL NA  EL DP EQR
Sbjct: 371 VEST--LIQPSHVTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDPEEQR 428

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  +++++      +   +DE+FL  +   MP + G+ +G DRL+ML+T A +I +VI 
Sbjct: 429 RRMVEQLEQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDVIL 488

Query: 345 TPFSQSNQE 353
            P  ++  +
Sbjct: 489 FPARRNKAD 497


>gi|302759575|ref|XP_002963210.1| hypothetical protein SELMODRAFT_79851 [Selaginella moellendorffii]
 gi|300168478|gb|EFJ35081.1| hypothetical protein SELMODRAFT_79851 [Selaginella moellendorffii]
          Length = 485

 Score =  301 bits (771), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 162/369 (43%), Gaps = 26/369 (7%)

Query: 3   QIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R                R  + S +R +  +  F+EI++  L
Sbjct: 124 PLPEKWHGLTDIEKRYRQRYLDMIMNPEVAGVFRARAKVVSVIRRFVEDLGFLEIETPIL 183

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q + G     R F T     + + + L+L+ + E   K++L  G E+++     +RN   
Sbjct: 184 QGAAGGA-DARPFITH---HNSLERDLFLRIATELHLKRMLVGGFERVYELGRIFRNEGI 239

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E Y+A+  Y  +M     ++ +CA  +       +Q  + +     +  
Sbjct: 240 STRHNPEFTSIEIYQAYADYNDMMALAEELVTKCAEAIFGNAKLLYQGTDISLERPWKRA 299

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR----VAHDDTWSDIFSRILIE 224
           ++         ID      +        L   + +        +A+  T  ++ + +   
Sbjct: 300 SMQSLVQEATGIDFSAFGSDLSAAKSAALSALSPRKDESLQTVIANCATVGNVLNEVFEA 359

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +E    +   T +  +P   S LA  + + P   +RFELY C  EL NA  EL DPIEQ
Sbjct: 360 VVEKT--LIQPTFVTNHPVEVSPLAKAHRSFPGLVERFELYICGRELANAFSELTDPIEQ 417

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
            HR E  +++  K  +    +DEDFL  L   MP ++G+ +G DRLVML+T + +I +VI
Sbjct: 418 VHRGESAVKQ-HKNDSYEVTLDEDFLTALEYGMPPTAGMGIGIDRLVMLLTDSPSIRDVI 476

Query: 344 WTPFSQSNQ 352
             P  +S Q
Sbjct: 477 AFPVLKSQQ 485


>gi|206602452|gb|EDZ38933.1| Lysyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 507

 Score =  301 bits (771), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 161/365 (44%), Gaps = 23/365 (6%)

Query: 2   HQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P +     D    YR+R              ++R  I  S+R +  +  F+E+++  
Sbjct: 151 HPLPEKWHGLTDIEQRYRQRYIDLIVNPDARDVFVRRGKILGSIRRFMEDRGFMEVETPM 210

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +  SPG     R F T     + +   LYL+ +PE   K+L+  G + +F     +RN  
Sbjct: 211 MHPSPGGA-LARPFVTH---HNALDVDLYLRIAPELYLKRLMVGGFDLVFEINRNFRNEG 266

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPEY 167
               H PEFTM+E+Y A+ S E LM    ++    A   + +  FS+     +       
Sbjct: 267 FSPRHNPEFTMMEFYMAYHSPEDLMALTESLFERLAREIHGESRFSYGEHLLDFAGPYRR 326

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           ++  +A      +D  +  D     D  L+  +  +   R A     +D+ + +  E+IE
Sbjct: 327 LSYFDALIGATGLDRSSLFDETRIMD--LIRQKGLEIPPRRAGKPYIADLQNLLFEEEIE 384

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA     DP  T RFEL+   +E+ N   EL DP EQ  R
Sbjct: 385 KT--LIQPTFVTGYPRSISPLARSSREDPEITDRFELFVAGVEIANGFMELNDPDEQLRR 442

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  + + +     E  P D D++  L   +P ++G  +G DRLVML+T  ++I +V+  P
Sbjct: 443 FLSQQESRNSGDLEAPPPDMDYIRALEIGLPPTAGEGIGIDRLVMLLTNQHSIRDVLLFP 502

Query: 347 FSQSN 351
             +  
Sbjct: 503 QMRPQ 507


>gi|209877783|ref|XP_002140333.1| lysyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
 gi|209555939|gb|EEA05984.1| lysyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
          Length = 557

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 91/373 (24%), Positives = 157/373 (42%), Gaps = 28/373 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P+     +D    YR+R                R+     +R +F     +E+++  
Sbjct: 175 HMLPTAISGLKDQEIRYRQRYLDLILNEDSRRVFKLRSRALKFIRNFFDNLGCLEVETPM 234

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +       +  R F T     + +   LY++ +PE   K+L+  G ++++     +RN  
Sbjct: 235 MNLIYSGAS-ARPFIT---YHNELNTQLYMRIAPEIYLKQLVIGGFDRVYEIGKNFRNEG 290

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT +E Y A+  Y  LM     +I       + K    +     P SEP  I
Sbjct: 291 IDLTHNPEFTAVEVYIAYADYYDLMDMTEELISGLIMEIHGK-LQIEYNPDGPDSEPVTI 349

Query: 169 TVAEAFARYANIDLGTT-------LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                + RY+ ++                Q +   +    ++  I V    T + +  ++
Sbjct: 350 NFTRPWKRYSFVEEIEAAIGKSLLRPLNGQENIKFMLDICKEYSIEVPQPQTAAKLLDKL 409

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
               IE     +  + +  +P   S LA  + +    T+RFEL+    ELCNA  EL +P
Sbjct: 410 AGHFIEIKC--HNPSFIIDHPQTMSPLAKWHRSKAEVTERFELFVLGKELCNAYTELNEP 467

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +QR  FE++++ K+    E  PIDE F   L   +P + G  +G DRL+ML+   NNI 
Sbjct: 468 RQQRTCFEEQVKAKELGDTEACPIDETFCLALEHGLPPTGGWGLGVDRLIMLLANKNNIK 527

Query: 341 EVIWTPFSQSNQE 353
           EV+  P  +  ++
Sbjct: 528 EVVLFPAMKPIKQ 540


>gi|313678766|ref|YP_004056506.1| lysine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950672|gb|ADR25267.1| lysine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 489

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 87/363 (23%), Positives = 159/363 (43%), Gaps = 28/363 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YRRR              + R  I   ++EYF    ++E+++ 
Sbjct: 136 LKPLPEKYHGLVDTEERYRRRWVDLITNDESKNKFILRTKIVKWIKEYFDNLDYLEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         + F+T     + + +   L+ + E   KK +  G E+++     +RN 
Sbjct: 196 FLQDYVSGAA-AKPFTTH---HNSLNQEFVLRIATEIPLKKCVVGGLERVYELGRIFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+ + E +M     + +   +   + +F    +  +     + 
Sbjct: 252 GYDTTHNPEFTTIEFYEAYSNVEGMMDRTEELFKVLCQKLGKSVFVNNGIAIDLSQPFKR 311

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + +A       D                 L+A++  I++    T   I + +  E +E
Sbjct: 312 VNMVDAVNEKTGKDFRNIS-------LDEAILEAKKHNIKIEKFWTTGHIINALYEELVE 364

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +  +   T +  +P   S L+    +DPRFT+R EL+    E  N   EL DPI+Q  R
Sbjct: 365 SS--LIQPTFIYGHPIEVSPLSAKS-SDPRFTERAELFINTKEYANMYTELSDPIDQLER 421

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+ ++ EKK   +E   ID DF+  L   MP + G  +G DRL+ML+T  ++I +V+  P
Sbjct: 422 FKSQIDEKKAGNDEASDIDWDFVDALEYGMPPTGGCGIGIDRLIMLLTETSSIRDVLLFP 481

Query: 347 FSQ 349
             +
Sbjct: 482 TLK 484


>gi|312137569|ref|YP_004004905.1| lysyl-tRNA ligase lyss [Rhodococcus equi 103S]
 gi|311886908|emb|CBH46216.1| lysyl-tRNA ligase LysS [Rhodococcus equi 103S]
          Length = 1100

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 148/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     D     R+R             L  R  I  SLR+      ++E+++ 
Sbjct: 742  LHPLPDKWKGLTDAETRVRQRYVDLAINPESRRLLAARTAIVKSLRDTLAGRDYLEVETP 801

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   +   F T +   +     LYL+ +PE   K+L  AG EK+F     +RN 
Sbjct: 802  ILQRIHGGA-NAAPFVTHI---NAYDLDLYLRIAPELFLKRLCVAGMEKVFEIGRVFRNE 857

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y AH  YE++M  C  +I+ AA  A+      +          + 
Sbjct: 858  GVDFKHNPEFTILEAYEAHSDYERMMVLCRELIQAAAVAAHGSQTIMRPGPDGELVAVDI 917

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +     +D   +    +L     +  I          +   +    +E
Sbjct: 918  SGEWPVKTMHGAVAEKLGVDVSPETPLEVLQKLCDENDIEYQKSWDAGAVAQEMYEHLVE 977

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +P  P    +++L A  +EL  A  EL DPI+QR R
Sbjct: 978  GQTEF--PTFYTNFPTSMSPLTRPHPTIPGVAAKWDLVAWGVELGTAYSELTDPIDQRRR 1035

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              ++         E   +DEDFL  L   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1036 LTEQSLLAAGGDAEAMELDEDFLQALEHAMPPTGGLGMGVDRIVMLITG-GSIRESLAFP 1094

Query: 347  FSQSN 351
            F++  
Sbjct: 1095 FAKPR 1099


>gi|124514753|gb|EAY56265.1| Lysyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 507

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 162/365 (44%), Gaps = 23/365 (6%)

Query: 2   HQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H +P +     D    YR+R              ++R  I  S+R +  +  F+E+++  
Sbjct: 151 HPLPEKWHGLTDIEQRYRQRYIDLIVNPDARDVFVRRGKILGSIRRFMEDRGFMEVETPM 210

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +  SPG     R F T     + +   LYL+ +PE   K+L+  G + +F     +RN  
Sbjct: 211 MHPSPGGA-LARPFVTH---HNALDVDLYLRIAPELYLKRLMVGGFDLVFEINRNFRNEG 266

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPEY 167
               H PEFTM+E+Y A+ S E LM    ++  R A E+     F++     +       
Sbjct: 267 FSPRHNPEFTMMEFYMAYHSPEDLMALTESLFDRLAREIHGDSRFAYGEHRLDFAGPYRR 326

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           ++  +A      +D  +  D     D  L+  +  +   R A     +D+ + +  E+IE
Sbjct: 327 LSYFDALTGATGLDRASLFDENRIMD--LIRQKGLEIPPRRAGKPYIADLQNLLFEEEIE 384

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S LA     DP  T RFEL+   +E+ N   EL DP EQ  R
Sbjct: 385 KT--LIQPTFVTGYPRSISPLARSSREDPEITDRFELFVAGVEIANGFMELNDPDEQLRR 442

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  + + +     E  P D D++  L   +P ++G  +G DRLVML+T  ++I +V+  P
Sbjct: 443 FLSQQESRNSGDLEAPPPDMDYIRALEIGLPPTAGEGIGIDRLVMLLTNQHSIRDVLLFP 502

Query: 347 FSQSN 351
             +  
Sbjct: 503 QMRPQ 507


>gi|261367898|ref|ZP_05980781.1| lysine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282570710|gb|EFB76245.1| lysine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 501

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 88/360 (24%), Positives = 156/360 (43%), Gaps = 27/360 (7%)

Query: 6   SQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +     +R+  YR+R              +KR+ I   LR +     F+E+++  L   
Sbjct: 151 EKFHGLTDREARYRQRYVDLIVNPDVKQTFIKRSAILRELRSFLDGKGFLEVETPILTPF 210

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
               +  R F T     + +   + L+   E   K+L+  G ++++     +RN      
Sbjct: 211 EIGAS-ARPFLTH---HNTLDMDMVLRIETELYLKRLIVGGMDRVYEVGRIFRNEGMDPK 266

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H PEFT +E Y+A+  Y  +M     +++  A+     +           S  E +T+ E
Sbjct: 267 HNPEFTTIELYQAYTDYHGMMDLVEEMMKTVAQKVCGSLQITYQGKDIDLSHWERMTMTE 326

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
           A  +Y+ +D      +            A++  + +    T   I +      +E N  +
Sbjct: 327 AVKKYSGVDFDAVQSD------EEAIALAKEHHVELPEIPTKGAILAEFFDAFVEEN--L 378

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
              T +  YP   S LA   P +P  T+RFE +    E  NA  EL DPI+Q+ RFE+++
Sbjct: 379 IQPTFIYDYPVEVSPLAKRKPGNPAITERFEYFINATEFGNAFSELNDPIDQKGRFERQV 438

Query: 293 QEKKKIYN-ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            E+K+I       +D D++  L   +P + G+  G DRLVML+T + +I +V+  P  + 
Sbjct: 439 AERKQIDPASKAQVDYDYVTALEYGLPPTGGLGFGVDRLVMLLTDSASIRDVLLFPTMKP 498


>gi|188524159|ref|ZP_02557488.2| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198273287|ref|ZP_03205823.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|195659755|gb|EDX53135.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198249807|gb|EDY74587.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
          Length = 493

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 85/368 (23%), Positives = 155/368 (42%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R+R              +KR++I   +R +     F E+++ 
Sbjct: 138 LKVLPEKYHGLVDEEIKARQRYLDLIVNDESKNTFIKRSLIIREMRNWLDSQGFFEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         R F T     + + K  YL+ + E + KK +  G EK++     +RN 
Sbjct: 198 VLQDILSGAA-ARPFITH---HNTLDKQYYLRIATEIALKKCIVGGFEKVYEIGRIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y A+     +M+   ++IR  A        +F+  + +     + 
Sbjct: 254 GMDSTHNPEFTSVELYVAYVDLWYIMQLTEDLIRHIATKLKLLNPTFRGFSVDLNKPFKK 313

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEKI 226
             + +    +  ++        +          A++  +++  H   +  I +      +
Sbjct: 314 AHMVDLINEHVGVN------FFEVKSDEQALELAKKHHVKLLDHQKNFGHIVNAFFETFV 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L      DPRF  RFEL+ C  E  NA  E+ DPI+Q  
Sbjct: 368 EEK--LIEPTFVYGHPVQVSPLTKKNQEDPRFVDRFELFICQKEFANAYSEINDPIDQYE 425

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E K   +E   +D +F+  L   MP + G+ +G DRLVML+T  ++I  V+  
Sbjct: 426 RFVAQLEEAKLGNDEANELDMEFIEALEYGMPPTGGLGIGVDRLVMLLTSNDSIRNVLLF 485

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 486 PHMKDKAK 493


>gi|262041444|ref|ZP_06014647.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259041238|gb|EEW42306.1| lysine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 312

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 86/323 (26%), Positives = 151/323 (46%), Gaps = 13/323 (4%)

Query: 32  LREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
           +R++ V   F+E+++  +Q  PG  +  R F T     + +   +YL+ +PE   K+L+ 
Sbjct: 1   MRQFMVARGFMEVETPMMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVV 56

Query: 92  AGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQK 150
            G E++F     +RN      H PEFTM+E Y A+  Y+ L++   ++ R  A+    + 
Sbjct: 57  GGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQTVLGKT 116

Query: 151 IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH 210
              + +   +   + E +T+ EA  ++         +  D  +       A+  GI+V  
Sbjct: 117 EVPYGDQVFDFGKQFEKLTMREAIKKH-----RPETNMADLDNFDAAKALAESIGIQVEK 171

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
                 I + I  E  E +  +   T +  YPA  S LA     +P  T RFE +    E
Sbjct: 172 SWGLGRIVTEIFDEVAEAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGRE 229

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRL 329
           + N   EL D  +Q  RF+ ++  K    +E    DED++  L   +P ++G+ +G DR+
Sbjct: 230 IGNGFSELNDAEDQAQRFQDQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRM 289

Query: 330 VMLVTGANNINEVIWTPFSQSNQ 352
           VML T ++ I +VI  P  +  +
Sbjct: 290 VMLFTNSHTIRDVILFPAMRPQK 312


>gi|325677462|ref|ZP_08157126.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325551709|gb|EGD21407.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 1121

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 148/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     D     R+R             L  R  I  SLR+      ++E+++ 
Sbjct: 763  LHPLPDKWKGLTDAETRVRQRYVDLAINPESRRLLAARTAIVKSLRDTLAGRDYLEVETP 822

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   +   F T +   +     LYL+ +PE   K+L  AG EK+F     +RN 
Sbjct: 823  ILQRIHGGA-NAAPFVTHI---NAYDLDLYLRIAPELFLKRLCVAGMEKVFEIGRVFRNE 878

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y AH  YE++M  C  +I+ AA  A+      +          + 
Sbjct: 879  GVDFKHNPEFTILEAYEAHSDYERMMVLCRELIQAAAVAAHGSQTIMRPGPDGELVAVDI 938

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +     +D   +    +L     +  I          +   +    +E
Sbjct: 939  SGEWPVKTMHGAVAEKLGVDVSPETPLEVLQKLCDENDIEYQKSWDAGAVAQEMYEHLVE 998

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +P  P    +++L A  +EL  A  EL DPI+QR R
Sbjct: 999  GQTEF--PTFYTNFPTSMSPLTRPHPTIPGVAAKWDLVAWGVELGTAYSELTDPIDQRRR 1056

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              ++         E   +DEDFL  L   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1057 LTEQSLLAAGGDAEAMELDEDFLQALEHAMPPTGGLGMGVDRIVMLITG-GSIRESLAFP 1115

Query: 347  FSQSN 351
            F++  
Sbjct: 1116 FAKPR 1120


>gi|255326539|ref|ZP_05367620.1| lysine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296415|gb|EET75751.1| lysine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 1085

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 150/371 (40%), Gaps = 32/371 (8%)

Query: 1    MHQIPSQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +H IP   + + +   RRR             L  R  +  +LR       F+E+++  L
Sbjct: 727  LHPIPFDSFTDPEARLRRRSTDLLVHPDQMQNLRLRTAVIKALRARLDAEGFLEVETPIL 786

Query: 50   QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
                G  +  R F T     +   + L L+ +PE   K+L+  G   ++     +RN   
Sbjct: 787  HTVHGGAS-ARPFRT---YINAYGEDLTLRIAPELYLKRLVVGGSGPVYELGRDFRNEGA 842

Query: 110  GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CNPF 162
               H PEFT+LE YR +  Y Q+ +    +I+ AA+     +               +  
Sbjct: 843  DATHNPEFTVLEAYRPYADYVQMRELTERLIKDAAQAVFGSVSLPLGRKALSERTVSDVS 902

Query: 163  SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
                 ++V +A +               Q D   L   AQQ G+RV        I   + 
Sbjct: 903  GPWRVVSVCDALSEALG------RRVDVQTDFEELLALAQQHGVRVHEGMGPGAIVEELY 956

Query: 223  IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
             E +E +      T    +PA  S LA  + + P   +R++L    +E+  A  EL DP+
Sbjct: 957  GELVEAHTVE--PTFYTDFPAETSPLAAPHRSVPGLAERWDLVINGMEMGCAYSELADPL 1014

Query: 283  EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
             QR R  ++  +      E   +DEDFL  L   MP + G+ +G DRLVML+     I  
Sbjct: 1015 VQRERLTEQSLKAASGDLEAMEVDEDFLYALETGMPPTGGLGLGVDRLVMLLAQTQ-IRG 1073

Query: 342  VIWTPFSQSNQ 352
            V+  PF +  +
Sbjct: 1074 VLSFPFVKPER 1084


>gi|83816690|ref|YP_445039.1| lysyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83758084|gb|ABC46197.1| lysyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 514

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 164/379 (43%), Gaps = 39/379 (10%)

Query: 1   MHQIP---------SQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQ 40
           +  +P              +++F YR+R               +R+ + S++R +  E  
Sbjct: 148 LRPLPVVKETEEETYYEVTDKEFRYRQRYVDLAVNEDVRGVFRQRSKLISTMRGFLDEQG 207

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
            +E+++  LQ   G  +    F T     + +  PLYL+ + E   K+LL  G E ++  
Sbjct: 208 CLEVETPVLQPVYGGASAA-PFETH---HNALDMPLYLRIADELYLKRLLVGGFEGVYEI 263

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNC 159
              +RN      H PEFTM+E Y A++ Y  +M    +++R AA   +     +F+    
Sbjct: 264 GKDFRNEGLSRFHNPEFTMMECYVAYKDYRWMMDLTEDLLRTAATALHDTPTVAFEGHEI 323

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIF 218
           +       I   EA       DL     +       +  + A + G+  V  D     + 
Sbjct: 324 DFGGGWTRIPFFEAIEEATGFDLYRAGAD------RVYDVAANELGLEEVEADMGLGGLL 377

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I  E +EP   +   T +  YP   S LA  +       +RFEL     E+ NA  EL
Sbjct: 378 DEIFSETVEPT--LVQPTFVTDYPIELSPLAKKHREKEGLVERFELVVAGREVANAFSEL 435

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYP----IDEDFLACLT-EMPQSSGIAMGFDRLVMLV 333
            DP +QR RFE++ +++    ++       IDED+L  L   MP ++G+ +G DRL M++
Sbjct: 436 NDPQDQRERFERQARQRAAEVDDDVDPEDLIDEDYLRALEYGMPPAAGLGVGIDRLTMIL 495

Query: 334 TGANNINEVIWTPFSQSNQ 352
           TG  +I +VI  P  +  Q
Sbjct: 496 TGQESIRDVILFPLLRPEQ 514


>gi|256372660|ref|YP_003110484.1| lysyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256009244|gb|ACU54811.1| lysyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 498

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 89/354 (25%), Positives = 150/354 (42%), Gaps = 27/354 (7%)

Query: 11  NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + D  YR+R              L R+ +  +LR+      F+E+++  LQ         
Sbjct: 141 DPDVRYRQRYVDLWANPGVRERFLARSRLVRALRDELDARGFVEVETPILQPIASGAA-A 199

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F T     + +   LYL+ +PE   K+L+  G E++F     +RN      H PEFTM
Sbjct: 200 RPFVTH---HNALDMDLYLRIAPELYLKRLVVGGIERVFELGRDFRNEGISPRHNPEFTM 256

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           LE Y+A+   + + +    ++  AA           +    +        T+ +  +   
Sbjct: 257 LEAYQAYGDIDAMRELTEGLLASAARAVFGSTRGENELGVIDLTPPFRAATMEDLVSEAV 316

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
                   +     +   L   A++  + V   +        +  E +EP   +   T +
Sbjct: 317 G-------ERVSLDEPARLLDLARRFDLAVLEPEA-GRALVALYEELVEPR--LIEPTFV 366

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             +P   S LA  + + P   +RFEL     EL NA  EL DP EQR RFE++ ++++  
Sbjct: 367 LDFPESVSPLARRHRSRPGRVERFELVVGGRELVNAFSELNDPDEQRARFEEQARQRRAG 426

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            +E    D D++  L   +P + G+ +G DRL ML+TG  +I EVI  P  +  
Sbjct: 427 DDEAMAYDADYVRALEYGLPPTGGLGLGVDRLAMLLTGQRHIKEVILFPTLRPE 480


>gi|171920720|ref|ZP_02695465.2| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|185178848|ref|ZP_02554646.2| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024429|ref|ZP_02570729.2| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518484|ref|ZP_03003968.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195867438|ref|ZP_03079442.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|209554339|ref|YP_002284482.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225550679|ref|ZP_03771628.1| lysine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551351|ref|ZP_03772297.1| lysine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|226710931|sp|B5ZAP2|SYK_UREU1 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|171903464|gb|EDT49753.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|184209484|gb|EDU06527.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018717|gb|EDU56757.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188998068|gb|EDU67165.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195660914|gb|EDX54167.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|209541840|gb|ACI60069.1| lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225379166|gb|EEH01531.1| lysine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379833|gb|EEH02195.1| lysine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 493

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 85/368 (23%), Positives = 155/368 (42%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R+R              +KR++I   +R +     F E+++ 
Sbjct: 138 LKVLPEKYHGLVDEEIKARQRYLDLIVNDESKNTFIKRSLIIREMRNWLDSQGFFEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         R F T     + + K  YL+ + E + KK +  G EK++     +RN 
Sbjct: 198 VLQDILSGAA-ARPFITH---HNTLDKQYYLRIATEIALKKCIVGGFEKVYEIGRIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y A+     +M+   ++IR  A        +F+  + +     + 
Sbjct: 254 GMDSTHNPEFTSVELYVAYVDLWYIMQLTEDLIRHIATKLKLLNPTFRGFSVDLNKPFKK 313

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEKI 226
             + +    +  ++        +          A++  +++  H   +  I +      +
Sbjct: 314 AHMVDLINEHVGVN------FFEVKSDEQALELAKKHHVKLLDHQKNFGHIVNAFFETFV 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L      DPRF  RFEL+ C  E  NA  E+ DPI+Q  
Sbjct: 368 EEK--LIEPTFVYGHPVQVSPLTKKNQEDPRFVDRFELFICQKEFANAYSEINDPIDQYE 425

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E K   +E   +D +F+  L   MP + G+ +G DRLVML+T  ++I  V+  
Sbjct: 426 RFVAQLEEAKLGNDEANELDMEFIEALEYGMPPTGGLGIGVDRLVMLLTSNDSIRNVLLF 485

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 486 PHMKDKAK 493


>gi|262197158|ref|YP_003268367.1| lysyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262080505|gb|ACY16474.1| lysyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 561

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 94/412 (22%), Positives = 158/412 (38%), Gaps = 61/412 (14%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R               KR+ I   LR +F    F+E+++ 
Sbjct: 153 LRPLPDKWKGLTNVETRYRQRYLDLAVNPEVREVFRKRSQILRGLRRFFDARAFLEVETP 212

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LYL+ +PE   K+LL  G ++++    ++RN 
Sbjct: 213 MMHPVIGGAA-ARPFVTH---HNALDLTLYLRIAPELYLKRLLVGGFDRVYEINRSFRNE 268

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  Y  LM     +    A+  N     ++     +     +
Sbjct: 269 GLSRAHNPEFTMLEFYQAYADYRDLMDLTEELFTELAQEVNGTLETTWDGKAIDLARPWQ 328

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-----------------------QQ 203
            ++V  A    A        D     +  L                            + 
Sbjct: 329 RLSVRRAVTEVAGRSPEVFDDPVRAAEEALAVDAPAGDVLSALLESLSADELSALGGREA 388

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-------------------INCCTILDRYPAP 244
            G           + ++I     + +                     +   T L  +P  
Sbjct: 389 LGKIWEDPAQRPALATKISERYADEHTRRVRAGHVAFAIFEAAVEESLVQPTFLTDFPLA 448

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            S LA     DP F  RFEL+    E+ NA  EL DP +QR RF+ +++ + +  +ET  
Sbjct: 449 VSPLARRNEDDPAFCDRFELFIGGSEMANAFSELNDPDDQRTRFQAQLEARAQGQDETMD 508

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
            DED+   L   MP ++G  +G DRL ML+TG ++I +VI  P  +    ++
Sbjct: 509 YDEDYCRALEVGMPPAAGEGIGIDRLTMLLTGQSSIRDVILFPQMRPESSQV 560


>gi|298291611|ref|YP_003693550.1| tRNA synthetase class II (D K and N) [Starkeya novella DSM 506]
 gi|296928122|gb|ADH88931.1| tRNA synthetase class II (D K and N) [Starkeya novella DSM 506]
          Length = 347

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 234/344 (68%), Gaps = 1/344 (0%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +P+ PWW+   H  RRPFLL R  I   LRE+F    FIE+++  LQ SPGNETH++AF+
Sbjct: 3   LPASPWWSPTVHADRRPFLLARQRIAGKLREFFAARDFIEVETPILQVSPGNETHLKAFA 62

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           TEL   D  R   YL TSPEF+ KKLLAAGE+++F  A  +RNGE+   H PEFTMLEWY
Sbjct: 63  TELERPDGTRTTRYLHTSPEFTAKKLLAAGEQRLFTLARVFRNGERTGRHHPEFTMLEWY 122

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           RAHE YE LM DC  ++   AE      + + +  C+    PE +TVA+AF R+A IDL 
Sbjct: 123 RAHEGYEALMADCAELLVSTAEAVGTTAWRYGDQACDVALAPERLTVADAFIRFAGIDLM 182

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
            T+   D  DR  L+  A+ AGIRVA DDTW+D+F+R+++EKIEP LG+   TIL  YP 
Sbjct: 183 ATV-GEDGNDRDALWNAARAAGIRVAEDDTWADVFTRVMVEKIEPFLGLGRPTILCEYPI 241

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
            E+ALA   P+DPR  +RFELY C +EL NA  EL D  EQR RFE+ M EK++IY E Y
Sbjct: 242 SEAALARPKPSDPRVAERFELYVCAVELANAFGELTDADEQRRRFEQWMDEKERIYGERY 301

Query: 304 PIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           PIDEDFLA L  MP++SGIA+GFDRLVML +GA  I +VIW P 
Sbjct: 302 PIDEDFLAALKVMPEASGIALGFDRLVMLASGARRIEDVIWAPV 345


>gi|296164539|ref|ZP_06847110.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900139|gb|EFG79574.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 1087

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 148/364 (40%), Gaps = 21/364 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R R   L            R+ +  S+RE      FIE+++ 
Sbjct: 730  LRPLPNKWKGLTDPEARVRTRYVDLAVNPESRELVTARSSVLRSVRETLFAKGFIEVETP 789

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 790  ILQQIHGGAT-ARPFVTHI---NTYDMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 845

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA+ A+ +    +  +       + 
Sbjct: 846  GVDFSHNPEFTLLEAYQAHADYRVWIDGCRELIQNAAQAAHGEQTVLRPADGGHLQPVDI 905

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +               +L   +  A I          +   +    +E
Sbjct: 906  SGDWPVKTVHDAVSEALGEHIDPDTPLSVLRRFSDAAHIPYRAQWDAGAVVLELYEHLVE 965

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + +     +R++L A  +EL  A  EL DP+EQR R
Sbjct: 966  DR--TERPTFYIDFPTSVSPLTRPHRSRRGVAERWDLVAWGVELGTAYSELTDPVEQRRR 1023

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              K+         E   +DEDFL  +   MP + G+ MG DRLVML+TG  +I E +  P
Sbjct: 1024 LRKQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRLVMLITG-RSIRETLPFP 1082

Query: 347  FSQS 350
             ++ 
Sbjct: 1083 LAKP 1086


>gi|296439737|sp|B2HR11|LYSX_MYCMM RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
          Length = 1105

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 150/364 (41%), Gaps = 21/364 (5%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  S+RE      FIE+++ 
Sbjct: 748  LRPLPNKWKGLTDPEARVRTRYVDLAVNAESRALITARSAVLRSVRETLSAKGFIEVETP 807

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 808  ILQQVHGGAT-ARPFITHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 863

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA+ AN    + +          + 
Sbjct: 864  GVDFSHNPEFTLLEAYQAHADYRVWIDSCRELIQNAAQAANGAPVAMRPAGGGRLEPVDI 923

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              V      +  +            D   L   A  A I          +   +    +E
Sbjct: 924  SGVWAVKTVHDAVSEALGEQIDADTDLATLRRLADAARIPYRAQWDAGAVVLELYEHLVE 983

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R
Sbjct: 984  SR--TEQPTFYLDFPTSVSPLTRPHRSKPGIAERWDLVAWGVELGTAYSELTDPVEQRLR 1041

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1042 LEEQSLLAAGGDPEAMQLDEDFLQAMEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFP 1100

Query: 347  FSQS 350
             ++ 
Sbjct: 1101 LAKP 1104


>gi|269128167|ref|YP_003301537.1| lysyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268313125|gb|ACY99499.1| lysyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 1113

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 158/366 (43%), Gaps = 28/366 (7%)

Query: 1    MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R+R             L  R    +++R+   E  ++E+++ 
Sbjct: 761  LRPLPNKRSGLADPEARVRQRYVEFIVNDEARRMLRMRGDAVAAIRDRLRELGYLEVETP 820

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G     R F+T +   +     LYL+ +PE   K+LL  G  K+F     +RN 
Sbjct: 821  MLQPIHGGAA-ARPFTTRI---NAYNMQLYLRIAPELYLKRLLVGGVGKVFEINRNFRNE 876

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMN-IIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                 H PEFTMLE Y  +  Y+ +     + ++R A       +       C+      
Sbjct: 877  GVSPKHNPEFTMLEAYEPYGDYDTMAALTRDLVLRAARAALGTTVVVRDGAECDLAEPWR 936

Query: 167  YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             ITV E+ +R    ++             L+   A++AG+          +   +    +
Sbjct: 937  QITVYESVSRALGEEITPDTP------ASLVGKYAERAGLEFDAGWGQGKLVQELFEALV 990

Query: 227  EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
            EP  GI   T +  YPA  S L   + ADPR  ++++L    +EL  A  EL+DPI QR 
Sbjct: 991  EP--GIKAPTFVRDYPAETSPLTRPHRADPRLAEKWDLIVFGLELGTAYSELIDPILQRQ 1048

Query: 287  RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            R  ++         E   +DEDFL  L   MP + G+ MG DRL++ +TG  +I E I  
Sbjct: 1049 RLTEQSLLAAGGDPEAMELDEDFLRALEYAMPPAGGMGMGIDRLLITLTG-KSIRETIPF 1107

Query: 346  PFSQSN 351
            P ++  
Sbjct: 1108 PLARPR 1113


>gi|237786207|ref|YP_002906912.1| lysyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237759119|gb|ACR18369.1| lysyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 536

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 144/380 (37%), Gaps = 35/380 (9%)

Query: 1   MHQIPSQP------------WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P               + +       R  ++ R  +  ++REY     F+E+++  
Sbjct: 164 LRPLPVSFADMNEDTRIRYRYTDLIMRDDARRMMITRVTVVRAVREYLQGLGFLEVETPM 223

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G EK+F     +RN  
Sbjct: 224 LQTLHGGAA-ARPFVTHS---NALDMDLYLRIAPELYLKRCVVGGIEKVFEVNRNFRNEG 279

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN---------- 158
               H PEF MLE Y+A+ +Y+        +I+  A   N+ +    +            
Sbjct: 280 IDSSHSPEFAMLETYQAYATYDDNAASTQGLIQHCARAVNKLVHDNWDPEQDPDSLVVTL 339

Query: 159 -----CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
                 +   E   + + ++             +         L   A   G+       
Sbjct: 340 ADGSTYDFGGEWPKLDMYDSLNEALQRKFPGQPEVTIHSTVDELKAIADTIGVEPGTGWG 399

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
                  I  E       ++    +  +P   S L   + + P  T++++LY    EL  
Sbjct: 400 HGKFVEEIWEELCADQ--LDGPVFVRNFPVETSPLTRDHRSKPGVTEKWDLYVRGFELAT 457

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              EL+DP+ QR RFE + +      +E   +DEDFL  +   MP ++G  MG DRL+M 
Sbjct: 458 GYSELIDPVIQRQRFEDQARLAAGGDDEAMVLDEDFLQAMEQGMPPTAGTGMGIDRLLMA 517

Query: 333 VTGANNINEVIWTPFSQSNQ 352
           +TG   I E +  P  +  +
Sbjct: 518 LTGLG-IRETVLFPLVKPER 536


>gi|13357618|ref|NP_077892.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762376|ref|YP_001752141.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|183508493|ref|ZP_02958023.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701849|ref|ZP_02971511.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|11387151|sp|Q9PR83|SYK_UREPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|189082973|sp|B1AI47|SYK_UREP2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|11271293|pir||G82937 lysyl-tRNA synthetase UU062 [imported] - Ureaplasma urealyticum
 gi|6899012|gb|AAF30467.1|AE002106_1 lysyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827953|gb|ACA33215.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|182675921|gb|EDT87826.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701144|gb|EDU19426.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 493

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 87/368 (23%), Positives = 157/368 (42%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R+R              +KR++I   +R +     F E+++ 
Sbjct: 138 LKVLPEKYHGLVDEEIKARQRYLDLIVNDETKNTFIKRSLIIREMRNWLDNKGFFEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         R F T     + + K  YL+ + E + KK +  G EK++     +RN 
Sbjct: 198 VLQDILSGAA-ARPFITH---HNTLNKEYYLRIATEIALKKCIIGGFEKVYEIGRIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y A+     +M+   ++IR  A   N    +F+  + +     + 
Sbjct: 254 GMDSTHNPEFTSVELYIAYVDLWYIMQLTEDLIRHIATKLNLLNPTFRGFSIDLNKPFKK 313

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEKI 226
             + +    Y  ++        +          A++  +++  H   +  I +      +
Sbjct: 314 AHMVDLINEYVGVN------FFEVKSDEQAIELAKKHHVKLLDHQKNFGHIVNAFFETFV 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L     +DPRF  RFEL+ C  E  NA  E+ DPI+Q  
Sbjct: 368 EEK--LVEPTFVYGHPLQVSPLTKKNQSDPRFVDRFELFICQKEFANAYSEINDPIDQYE 425

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E K   +E   +D +F+  L   MP + G+ +G DRLVML+T  ++I  V+  
Sbjct: 426 RFIAQLEEAKLGNDEASELDMEFIEALEYGMPPTGGLGIGVDRLVMLLTSNDSIRNVLLF 485

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 486 PHMKDKTK 493


>gi|296439733|sp|A0QYV1|LYSX_MYCS2 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
          Length = 1106

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 153/368 (41%), Gaps = 24/368 (6%)

Query: 1    MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     D   R              R  +  R+    ++RE      F+E+++ 
Sbjct: 746  LRPLPDKWKGLTDQEARVRARYVDLAVNTEARDLIRARSGALHAIRETLYSKGFLEVETP 805

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L   G E++F    A+RN 
Sbjct: 806  ILQQIHGGA-NARPFLTHI---NAYDLDLYLRIAPELYLKRLCVGGVERVFELGRAFRNE 861

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA+ AN      +    +P    E 
Sbjct: 862  GVDFSHNPEFTLLEAYQAHADYNVWIDGCRELIQNAAQAANGAQVFLRPRPNDPAGTLEP 921

Query: 168  ITVAEAFARYANIDLGTTLDNPD---QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            + ++  +A     D  +         + +   L      AGI          +   +   
Sbjct: 922  VDISGQWAVKTVHDAVSEAIGEHITPETELGELRRLCDSAGIPYLTHWDAGAVVLEMYEH 981

Query: 225  KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             +E        T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQ
Sbjct: 982  LVEDR--TTEPTFYKDFPTSVSPLTRPHRSIPGVAERWDLVAWGVELGTAYSELTDPVEQ 1039

Query: 285  RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
            R R +++         E   +DEDFL  +   MP + G+ MG DR+VM++TG  +I E +
Sbjct: 1040 RRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMMITG-RSIRETL 1098

Query: 344  WTPFSQSN 351
              P ++  
Sbjct: 1099 PFPLAKPR 1106


>gi|171920411|ref|ZP_02931731.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|171902853|gb|EDT49142.1| lysyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
          Length = 493

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 87/368 (23%), Positives = 157/368 (42%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R+R              +KR++I   +R +     F E+++ 
Sbjct: 138 LKVLPEKYHGLVDEEIKARQRYLDLIVNDEAKNTFIKRSLIIREMRNWLDNKGFFEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ         R F T     + + K  YL+ + E + KK +  G EK++     +RN 
Sbjct: 198 VLQDILSGAA-ARPFITH---HNTLNKEYYLRIATEIALKKCIIGGFEKVYEIGRIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y A+     +M+   ++IR  A   N    +F+  + +     + 
Sbjct: 254 GMDSTHNPEFTSVELYIAYVDLWYIMQLTEDLIRHIATKLNLLNPTFRGFSIDLNKPFKK 313

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEKI 226
             + +    Y  ++        +          A++  +++  H   +  I +      +
Sbjct: 314 AHMVDLINEYVGVN------FFEVKSDEQAIELAKKHHVKLLDHQKNFGHIVNAFFETFV 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L     +DPRF  RFEL+ C  E  NA  E+ DPI+Q  
Sbjct: 368 EEK--LVEPTFVYGHPLQVSPLTKKNQSDPRFVDRFELFICQKEFANAYSEINDPIDQYE 425

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +++E K   +E   +D +F+  L   MP + G+ +G DRLVML+T  ++I  V+  
Sbjct: 426 RFIAQLEEAKLGNDEASELDMEFIEALEYGMPPTGGLGIGVDRLVMLLTSNDSIRNVLLF 485

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 486 PHMKDKTK 493


>gi|118468939|ref|YP_888089.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118170226|gb|ABK71122.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 1089

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 153/368 (41%), Gaps = 24/368 (6%)

Query: 1    MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     D   R              R  +  R+    ++RE      F+E+++ 
Sbjct: 729  LRPLPDKWKGLTDQEARVRARYVDLAVNTEARDLIRARSGALHAIRETLYSKGFLEVETP 788

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L   G E++F    A+RN 
Sbjct: 789  ILQQIHGGA-NARPFLTHI---NAYDLDLYLRIAPELYLKRLCVGGVERVFELGRAFRNE 844

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA+ AN      +    +P    E 
Sbjct: 845  GVDFSHNPEFTLLEAYQAHADYNVWIDGCRELIQNAAQAANGAQVFLRPRPNDPAGTLEP 904

Query: 168  ITVAEAFARYANIDLGTTLDNPD---QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            + ++  +A     D  +         + +   L      AGI          +   +   
Sbjct: 905  VDISGQWAVKTVHDAVSEAIGEHITPETELGELRRLCDSAGIPYLTHWDAGAVVLEMYEH 964

Query: 225  KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             +E        T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQ
Sbjct: 965  LVEDR--TTEPTFYKDFPTSVSPLTRPHRSIPGVAERWDLVAWGVELGTAYSELTDPVEQ 1022

Query: 285  RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
            R R +++         E   +DEDFL  +   MP + G+ MG DR+VM++TG  +I E +
Sbjct: 1023 RRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMMITG-RSIRETL 1081

Query: 344  WTPFSQSN 351
              P ++  
Sbjct: 1082 PFPLAKPR 1089


>gi|115447385|ref|NP_001047472.1| Os02g0623500 [Oryza sativa Japonica Group]
 gi|48716234|dbj|BAD23770.1| putative lysyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113537003|dbj|BAF09386.1| Os02g0623500 [Oryza sativa Japonica Group]
 gi|215694818|dbj|BAG90009.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 586

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 99/387 (25%), Positives = 165/387 (42%), Gaps = 41/387 (10%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R    S +R+      FIE+++ 
Sbjct: 206 LLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRTRAKAVSEIRKTMESFGFIEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + +++ LYL+ + E   K++L  G EK++     +RN 
Sbjct: 266 VLQGAAGGA-EARPFITH---HNSLQRDLYLRIATELHLKRMLVGGLEKVYEIGRIFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  YE +M     I+ RCA     +    +Q    +      
Sbjct: 322 GISTRHNPEFTTIEMYEAYSDYESMMNLAEEIVTRCAMATHGKLRVDYQGTEISLERPWR 381

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA-GIRVAHDDTWSDIFSRILIEK 225
             T+         ID  +  ++ +        ++ +    I +    +   + + +    
Sbjct: 382 RETMHSLVKEATGIDFNSFGEDLESAKNAARGIKTESNENISLQACSSVGHVLNEVFETV 441

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E +  +   T +  YP   S LA  +      T+RFEL+ C  E+ NA  EL DPI+QR
Sbjct: 442 VESS--LVQPTFVLDYPVEISPLAKPHRRYAGLTERFELFICGREIGNAFSELTDPIDQR 499

Query: 286 HRFEKEMQE-----------------KKKIYNETYP--IDEDFLACLT-EMPQSSGIAMG 325
            RFE ++++                 K +  + +Y   +DEDFL  L   MP +SG+ +G
Sbjct: 500 GRFENQIKQHNAKRAAMTKEVKSTEGKHEEDDFSYEVTLDEDFLTSLEYGMPPASGMGLG 559

Query: 326 FDRLVMLVTGANNINEVIWTPFSQSNQ 352
            DRLVML+T + +I +VI  P  +  Q
Sbjct: 560 IDRLVMLLTNSASIRDVIAFPVLKIQQ 586


>gi|183982461|ref|YP_001850752.1| lysyl-tRNA synthetase 2 LysX [Mycobacterium marinum M]
 gi|183175787|gb|ACC40897.1| lysyl-tRNA synthetase 2 LysX [Mycobacterium marinum M]
          Length = 1097

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 150/364 (41%), Gaps = 21/364 (5%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  S+RE      FIE+++ 
Sbjct: 740  LRPLPNKWKGLTDPEARVRTRYVDLAVNAESRALITARSAVLRSVRETLSAKGFIEVETP 799

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 800  ILQQVHGGAT-ARPFITHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 855

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA+ AN    + +          + 
Sbjct: 856  GVDFSHNPEFTLLEAYQAHADYRVWIDSCRELIQNAAQAANGAPVAMRPAGGGRLEPVDI 915

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              V      +  +            D   L   A  A I          +   +    +E
Sbjct: 916  SGVWAVKTVHDAVSEALGEQIDADTDLATLRRLADAARIPYRAQWDAGAVVLELYEHLVE 975

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R
Sbjct: 976  SR--TEQPTFYLDFPTSVSPLTRPHRSKPGIAERWDLVAWGVELGTAYSELTDPVEQRLR 1033

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1034 LEEQSLLAAGGDPEAMQLDEDFLQAMEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFP 1092

Query: 347  FSQS 350
             ++ 
Sbjct: 1093 LAKP 1096


>gi|283458954|ref|YP_003363602.1| lysyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283135017|dbj|BAI65782.1| lysyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 1116

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 152/371 (40%), Gaps = 32/371 (8%)

Query: 1    MHQIPSQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +H IP   + + +   RRR             L  R  +  +LR       F+E+++  L
Sbjct: 758  LHPIPFDSFTDPEARLRRRSTDLLVHPDQMQNLRLRTAVIKALRARLDTEGFLEVETPIL 817

Query: 50   QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
                G  +  R F T     +   + L L+ +PE   K+L+  G   ++     +RN   
Sbjct: 818  HTVHGGAS-ARPFRT---YINAYGEDLTLRIAPELYLKRLVVGGSGPVYELGRDFRNEGA 873

Query: 110  GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-------KIFSFQNVNCNPF 162
               H PEFT+LE YR +  Y Q+ +    +++ AA               S + V  +  
Sbjct: 874  DATHNPEFTVLEAYRPYADYVQMRELTECLLKDAARAVFGSVSLPLGHKASSERVVTDVS 933

Query: 163  SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
            +    ++V +A +               Q D   L   AQQ G+RV        I   + 
Sbjct: 934  APWRVVSVCDALSEALG------RRVDVQTDFEELLALAQQHGVRVHEGMGPGAIVEELY 987

Query: 223  IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
             E +E +      T    +PA  S LA  + + P   +R++L    +E+  A  EL DP+
Sbjct: 988  GELVEAHTVE--PTFYTDFPAETSPLAAPHRSVPGLAERWDLVINGMEMGCAYSELADPL 1045

Query: 283  EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
             QR R  ++  +      E   +DEDFL  L   MP + G+ +G DRLVML+     I  
Sbjct: 1046 VQRERLTEQSLKAASGDLEAMEVDEDFLYALETGMPPTGGLGLGVDRLVMLLAQTQ-IRG 1104

Query: 342  VIWTPFSQSNQ 352
            V+  PF +  +
Sbjct: 1105 VLSFPFVKPER 1115


>gi|296439734|sp|A0PP57|LYSX_MYCUA RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
          Length = 1105

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 149/364 (40%), Gaps = 21/364 (5%)

Query: 1    MHQIPSQP--WWNRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  S+RE      FIE+++ 
Sbjct: 748  LRPLPNKWNGLTDPEARVRTRYVDLAVNAESRTLITARSAVLRSVRETLSAKGFIEVETP 807

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 808  ILQQVHGGAT-ARPFITHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 863

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA+ AN    + +            
Sbjct: 864  GVDFSHNPEFTLLEAYQAHADYRVWIDSCRELIQNAAQAANGAPVAMRPAGGGRLEPVGI 923

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              V      +  +            D   L   A  A I          +   +    +E
Sbjct: 924  SGVWAVKTVHDAVSEALGEQIDADTDLATLRRLADAARIPYRAQWDAGAVVLELYEHLVE 983

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R
Sbjct: 984  SR--TEQPTFYLDFPTSVSPLTRPHRSKPGIAERWDLVAWGVELGTAYSELTDPVEQRLR 1041

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1042 LEEQSLLAAGGDPEAMQLDEDFLQAMEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFP 1100

Query: 347  FSQS 350
             ++ 
Sbjct: 1101 LAKP 1104


>gi|167751088|ref|ZP_02423215.1| hypothetical protein EUBSIR_02073 [Eubacterium siraeum DSM 15702]
 gi|167656006|gb|EDS00136.1| hypothetical protein EUBSIR_02073 [Eubacterium siraeum DSM 15702]
          Length = 503

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 28/363 (7%)

Query: 6   SQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +    +D    YR+R              +KR+MI   +R +     ++E+D+  L   
Sbjct: 154 EKWHGLKDKEERYRKRYLDLIANPEIKDTFVKRSMILREIRSFLDSKGYLEVDTPVLHTL 213

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
                  R F T     + +   +YL+   E   K+L+  G ++++     +RN      
Sbjct: 214 EIGAA-ARPFVTH---HNALDIDMYLRIETELYLKRLIVGGFDRVYEVGRIFRNEGMDAT 269

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPEYITVA 171
           H PEFT +E Y+A+  Y  +M     + R  A +V       +Q          + +T+ 
Sbjct: 270 HNPEFTSIEMYQAYTDYYGMMDLIEEMYRTVALKVCGTDTVPYQGKEIEIGKPWKRMTMK 329

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           EA   Y  +D  +   + D         QA+     +A   T  ++   +  E +E    
Sbjct: 330 EAVKEYTGLDYDSWTSDAD------AVAQAKTKHAEIADTATKGEVLIELFEEFVEEK-- 381

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   TI+  YP   S LA   P DP FT+RFE +    E  NA  EL DPI+QR RF K+
Sbjct: 382 LIQPTIIYDYPVENSPLAKRKPTDPAFTERFEYFINACEFGNAFSELNDPIDQRERFTKQ 441

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + EK+K       IDEDFL  L   +P + G+ MG DR VML+T + +I +V+  P  + 
Sbjct: 442 VMEKRKQGANAQ-IDEDFLTALEYGLPPTGGLGMGLDRFVMLLTDSASIRDVLLFPTMKP 500

Query: 351 NQE 353
             +
Sbjct: 501 LSD 503


>gi|290994146|ref|XP_002679693.1| lysyl-tRNA synthase [Naegleria gruberi]
 gi|284093311|gb|EFC46949.1| lysyl-tRNA synthase [Naegleria gruberi]
          Length = 551

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 90/375 (24%), Positives = 158/375 (42%), Gaps = 35/375 (9%)

Query: 1   MHQIPSQ-------PWWNRDFHYRRR------------PFLLKRNMIQSSLREYFVENQF 41
           +HQ+P +          + +  +R R               L RN   S +R +F    F
Sbjct: 183 LHQLPHKVSYSEGTSLDDIEKRFRYRYLDLLTNHEELYNIFLIRNKTMSFIRNFFTNKGF 242

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           +E+++  L    G   + + F T L   + +   L L+ +PE   K+L+  G +++F  +
Sbjct: 243 LEVETPILSEKSGGA-NAKPFETHL---NALDMDLKLRIAPELYLKQLVIGGMDRVFELS 298

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF--SFQNVNC 159
             +RN      H PEFT  E Y+A   Y ++M       R      N             
Sbjct: 299 KVFRNEGMDSTHNPEFTSCEAYQAFADYNEMMDMTEEFFRQIVTEINGSPILKVDDIGEI 358

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR-HLLYLQAQQAGIRVA-HDDTWSDI 217
           +       ++  ++   +    +   L  P  PD  + L    ++  ++ +     +  +
Sbjct: 359 DFSKPFRRVSFIDSIEEH----IKEKLPLPTDPDAVNKLLDICKKHKVKYSTEKVNYGYL 414

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             ++L   +EP       T +  +P   S L+  +      T+RFEL+    ELCNA  E
Sbjct: 415 LDKLLGTFVEPECV--QPTFIMDHPVDLSPLSKSHRDSSLITERFELFIGTKELCNAYTE 472

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DP +QR RF K+ ++KK+  +E +  DE F   L   +P + G  +G DRLVML++  
Sbjct: 473 LNDPEDQRERFRKQQEKKKQ-DDEAHENDEAFCKALEYGLPPTGGWGIGVDRLVMLLSNQ 531

Query: 337 NNINEVIWTPFSQSN 351
            +I +V+  P  +  
Sbjct: 532 KSIRDVLLFPMLKPK 546


>gi|293364012|ref|ZP_06610748.1| lysine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552502|gb|EFF41276.1| lysine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 492

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 154/366 (42%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YRRR                R  + S +R YF   +++E+++ 
Sbjct: 139 LKPLPDKYHGLSDVEERYRRRYVDLIVNEETKNTFWTRTKVISEIRRYFDSLEYMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L          + F T     + + +   L+ + E   KKLL  G ++++     +RN 
Sbjct: 199 FLHDYISGAA-AKPFKTH---HNALDQEFVLRIATEIPLKKLLVGGIDRVYEIGRIFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+ + E +M+    + +   +  N+ IF    V  +       
Sbjct: 255 GIDTTHNPEFTSIEFYEAYSNLEGMMQRTEALFKQLCKRLNKTIFLNNGVEIDLSKPFSR 314

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + +A +    ++                   A++  I++        I + +  E IE
Sbjct: 315 LNMVDAVSEATGVNFREIS-------FEKACDIAKKHKIKIEKFYKLGHIVNCLFEELIE 367

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S L      DPRFT+R EL+    E  N   EL DPI+Q  R
Sbjct: 368 EK--LIQPTFVTGHPIEISPLTAKSK-DPRFTERAELFINKKEYANMYTELSDPIDQLER 424

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE+++ EK    +E   ID DF+  L   MP + G  +G DRL+ML++   +I +V+  P
Sbjct: 425 FEEQLNEKNSGNDEANDIDYDFIDALEYGMPPAGGCGIGIDRLIMLLSEKESIRDVLLFP 484

Query: 347 FSQSNQ 352
             +  +
Sbjct: 485 TLRRKK 490


>gi|227824115|ref|YP_002828088.1| lysyl-tRNA synthetase protein [Sinorhizobium fredii NGR234]
 gi|227343117|gb|ACP27335.1| lysyl-tRNA synthetase protein [Sinorhizobium fredii NGR234]
          Length = 350

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 198/345 (57%), Positives = 251/345 (72%), Gaps = 1/345 (0%)

Query: 4   IP-SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           +P + PWW  D H  RRPFL+ RN IQS+LR +F E  FIE+D+ +LQ SPGNE H+ AF
Sbjct: 1   MPHASPWWTPDVHADRRPFLIGRNRIQSALRRFFGERDFIEVDTATLQVSPGNEAHLHAF 60

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           +T+ +  D   +PLYL TSPEF+CKKL+AAGE +I CFAH +RN E+G LH PEFTMLEW
Sbjct: 61  ATQALGPDGSVQPLYLHTSPEFACKKLVAAGERRIACFAHVYRNRERGPLHHPEFTMLEW 120

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YRA E+YE LM+DC  I+  AAE    +  ++Q  +C+PF EPE ++VA+AFAR+A IDL
Sbjct: 121 YRAEETYETLMRDCAGILALAAETTGTRSLAYQGRSCDPFLEPERLSVADAFARFAGIDL 180

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             ++      DR  L    ++AG+RVA DDTW+D+FSR+L+EK+EPNLG+   TILD YP
Sbjct: 181 LASIGKDGDTDRESLAAAMREAGLRVAEDDTWADLFSRVLVEKVEPNLGMGRATILDEYP 240

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A E+ALA   P D R  +RFELYAC +EL NA  EL D  EQR RFE EM EK ++Y ET
Sbjct: 241 AAEAALARPTPRDRRVAERFELYACGVELANAFGELTDATEQRRRFELEMAEKARVYGET 300

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           YP+DEDFLA L  MP++SGIA+GFDRLVML TGA  I++V+W P 
Sbjct: 301 YPLDEDFLAALALMPEASGIALGFDRLVMLATGAARIDQVLWAPV 345


>gi|39932450|sp|Q98QH1|SYK1_MYCPU RecName: Full=Lysyl-tRNA synthetase 1; AltName: Full=Lysine--tRNA
           ligase 1; Short=LysRS 1
          Length = 491

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 160/366 (43%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +  +     D    YR+R                R  + S +R++F E  F+E+++ 
Sbjct: 139 LTPLAEKYHGLVDVEERYRKRYLDLISNPNIKEIFWTRTKVISKIRKFFDEQNFMEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +     L+ + E   KKLL  G ++++     +RN 
Sbjct: 199 MLHSILGGA-NARPFKT---YHNSLSSSFNLRIATELPLKKLLVGGIDRVYEIGRIFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y+A+ + E +M+   N+I+  A+          +V  +  ++ + 
Sbjct: 255 GIDTTHNPEFTSIEFYQAYSNLEIMMEQTENLIKFIAKELGLSKIKNHDVEIDLLADFKK 314

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I + +A +    +D           D       A +  ++V        I + +    IE
Sbjct: 315 INMVDAVSEATKVDFRNI-------DLDKAIEVAGRYKVKVEKYFKVGHIINELFELLIE 367

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     D RFT+R EL+    E  N   EL DP++QR R
Sbjct: 368 KT--LIQPTFVTGHPIEISPLAATSE-DERFTERAELFINTKEYANMFTELNDPLDQRRR 424

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE +++EK+    E   IDE FL+ L   +P + G  +G DRLVML+T   +I EVI  P
Sbjct: 425 FEAQLEEKESGNEEASEIDESFLSALEYGLPPAGGCGIGIDRLVMLLTEKESIREVILFP 484

Query: 347 FSQSNQ 352
             +  Q
Sbjct: 485 TLKKKQ 490


>gi|242037499|ref|XP_002466144.1| hypothetical protein SORBIDRAFT_01g002140 [Sorghum bicolor]
 gi|241919998|gb|EER93142.1| hypothetical protein SORBIDRAFT_01g002140 [Sorghum bicolor]
          Length = 580

 Score =  299 bits (766), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 100/389 (25%), Positives = 165/389 (42%), Gaps = 44/389 (11%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R  + S +R+      FIE+++ 
Sbjct: 199 LLPLPDKYHGLTDVDKRYRQRYVDMIANPKVADVFRTRAKVVSEIRKTMESFGFIEVETP 258

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + +++ LYL+ + E   K++L  G EK++     +RN 
Sbjct: 259 VLQGAAGGA-EARPFIT---YHNSLQRDLYLRIATELHLKRMLVGGLEKVYEIGRIFRNE 314

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y A+  YE +M     I+ RCA     +    ++    +      
Sbjct: 315 GISTRHNPEFTTIEMYEAYSDYESMMNMAEEIVTRCAMATHGKLKVDYEGTEISLERPWR 374

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR----VAHDDTWSDIFSRIL 222
             T+         ID  +  D  +   R +  L   + G      +    +   + + + 
Sbjct: 375 RETMHSLVKEATGIDFNSFGD-VESAKRAVKGLPGFEVGNNESTSLQACSSVGHVLNEVF 433

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +E    +   T +  YP   S LA  + +    T+RFEL+ C  E+ NA  EL DPI
Sbjct: 434 ETFVEST--LVQPTFVLDYPVEISPLAKPHRSHVGLTERFELFICGREIGNAFSELTDPI 491

Query: 283 EQRHRFEKEMQE----KKKIYNE--------------TYPIDEDFLACLT-EMPQSSGIA 323
           +QR RFE ++++    +  +  E                 +DEDFL  L   MP +SG+ 
Sbjct: 492 DQRSRFENQIKQHNVKRAAMAKEVKSTEGDGDDDYSYEVSLDEDFLTSLEYGMPPASGMG 551

Query: 324 MGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           +G DRLVML+T +++I +VI  P  +  Q
Sbjct: 552 LGIDRLVMLLTNSSSIRDVIAFPVLKIQQ 580


>gi|118617265|ref|YP_905597.1| lysyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118569375|gb|ABL04126.1| lysyl-tRNA synthetase 2 LysX [Mycobacterium ulcerans Agy99]
          Length = 1097

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 149/364 (40%), Gaps = 21/364 (5%)

Query: 1    MHQIPSQP--WWNRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  S+RE      FIE+++ 
Sbjct: 740  LRPLPNKWNGLTDPEARVRTRYVDLAVNAESRTLITARSAVLRSVRETLSAKGFIEVETP 799

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 800  ILQQVHGGAT-ARPFITHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 855

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA+ AN    + +            
Sbjct: 856  GVDFSHNPEFTLLEAYQAHADYRVWIDSCRELIQNAAQAANGAPVAMRPAGGGRLEPVGI 915

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              V      +  +            D   L   A  A I          +   +    +E
Sbjct: 916  SGVWAVKTVHDAVSEALGEQIDADTDLATLRRLADAARIPYRAQWDAGAVVLELYEHLVE 975

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R
Sbjct: 976  SR--TEQPTFYLDFPTSVSPLTRPHRSKPGIAERWDLVAWGVELGTAYSELTDPVEQRLR 1033

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1034 LEEQSLLAAGGDPEAMQLDEDFLQAMEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFP 1092

Query: 347  FSQS 350
             ++ 
Sbjct: 1093 LAKP 1096


>gi|145518141|ref|XP_001444948.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412381|emb|CAK77551.1| unnamed protein product [Paramecium tetraurelia]
          Length = 647

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 91/391 (23%), Positives = 164/391 (41%), Gaps = 48/391 (12%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR R              L R+ +   LREYF    FIE+++ 
Sbjct: 233 LHMLPTAHFGFKDHEQRYRMRYLDLIMNKKVRDIFLTRSSVIKQLREYFDGKGFIEVETP 292

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           SL    G  T  + F T     + + + L+++ +PE   K L+  G ++++     +RN 
Sbjct: 293 SLNVIQGGAT-AKPFKT---FHNSLHRDLFMRVAPELYLKMLIVGGLDRVYEIGKNFRNE 348

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII--------------------------R 141
                H PEFT +E+Y A+  Y  LM     ++                           
Sbjct: 349 GIDQTHNPEFTAMEFYWAYCDYNDLMTVTEEVLSSIVLKLKGSYKFKIHKGDNPTITLTE 408

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
              +  + K      +  +       +++     +     L   L++ +         QA
Sbjct: 409 HDIKSGHFKENEEDFIELDFTPPWPRVSMMAELEKKLGEKLPEVLESEEAN--AFFVEQA 466

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +  ++  T + +  +++   +E  +     T L  +P   S L+ ++   P  T+R
Sbjct: 467 KKHKVECSNPRTTARLIDKLVGHFLE--VNFRNPTFLIDHPQLMSPLSKVHRQYPGLTER 524

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSS 320
           FEL+    ELCNA  EL DP  Q+  F+K++++  K  +E    DE F+  L   +P ++
Sbjct: 525 FELFVNYHELCNAYTELNDPFVQKALFQKQVEDAAKGDDEAMGYDEGFIKSLEHALPPTA 584

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           G  +G DR VML+T   NI EV+  P  +  
Sbjct: 585 GWGLGIDRFVMLLTDTQNIQEVLLFPAMKPE 615


>gi|15828861|ref|NP_326221.1| lysyl-tRNA synthetase (lysine--tRNA ligase) (LysRS) [Mycoplasma
           pulmonis UAB CTIP]
 gi|14089804|emb|CAC13563.1| LYSYL-TRNA SYNTHETASE (LYSINE--TRNA LIGASE) (LYSRS) [Mycoplasma
           pulmonis]
          Length = 510

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 160/366 (43%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +  +     D    YR+R                R  + S +R++F E  F+E+++ 
Sbjct: 158 LTPLAEKYHGLVDVEERYRKRYLDLISNPNIKEIFWTRTKVISKIRKFFDEQNFMEVETP 217

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + R F T     + +     L+ + E   KKLL  G ++++     +RN 
Sbjct: 218 MLHSILGGA-NARPFKT---YHNSLSSSFNLRIATELPLKKLLVGGIDRVYEIGRIFRNE 273

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y+A+ + E +M+   N+I+  A+          +V  +  ++ + 
Sbjct: 274 GIDTTHNPEFTSIEFYQAYSNLEIMMEQTENLIKFIAKELGLSKIKNHDVEIDLLADFKK 333

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I + +A +    +D           D       A +  ++V        I + +    IE
Sbjct: 334 INMVDAVSEATKVDFRNI-------DLDKAIEVAGRYKVKVEKYFKVGHIINELFELLIE 386

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA     D RFT+R EL+    E  N   EL DP++QR R
Sbjct: 387 KT--LIQPTFVTGHPIEISPLAATSE-DERFTERAELFINTKEYANMFTELNDPLDQRRR 443

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE +++EK+    E   IDE FL+ L   +P + G  +G DRLVML+T   +I EVI  P
Sbjct: 444 FEAQLEEKESGNEEASEIDESFLSALEYGLPPAGGCGIGIDRLVMLLTEKESIREVILFP 503

Query: 347 FSQSNQ 352
             +  Q
Sbjct: 504 TLKKKQ 509


>gi|116253922|ref|YP_769760.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123081767|sp|Q1MBK9|SYK_RHIL3 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|115258570|emb|CAK09674.1| putative lysyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 498

 Score =  299 bits (765), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 165/369 (44%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I S +R +   + F+E+++ 
Sbjct: 142 LLPMPEKWHGLSDIELRYRKRHLDIMTNEDSKLRFQQRSKILSGIRRFMENDGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            LQ   G  T    F T     + ++  +YL+ +PE   K+ L +G  +K+F     +RN
Sbjct: 202 MLQSVYGGAT-AEPFKTH---HNTLKLDMYLRIAPELFLKRTLISGLTDKVFEVNRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A  +     F F +   +     
Sbjct: 258 EGVSTRHNPEFTMMECYWAYADYEDIMDLVERLFESLALSIHGTTEFPFGDKTMSFKGPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + + + +A      ID      + +        + A+ AG  V  D TW +  + I  EK
Sbjct: 318 KRVPMPDAVKEATGIDFRAIKTDEE------ARVAAKAAGFAVEKDWTWGECLAFIFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   + +  +P   S  A   P +PR  +RFE Y    EL NA  EL DP EQR
Sbjct: 372 VEST--LIQPSHVTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDPEEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  +++++      +   +DE+FL  +   MP + G+ +G DRL+ML+T A +I +VI 
Sbjct: 430 RRMVEQLEQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDVIL 489

Query: 345 TPFSQSNQE 353
            P  +S  +
Sbjct: 490 FPARRSKAD 498


>gi|260464412|ref|ZP_05812603.1| Lysine--tRNA ligase [Mesorhizobium opportunistum WSM2075]
 gi|259029882|gb|EEW31167.1| Lysine--tRNA ligase [Mesorhizobium opportunistum WSM2075]
          Length = 348

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 190/346 (54%), Positives = 240/346 (69%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
              + PWW  D H  RRP L+ RN + ++LR++F    FIE+++ +LQ SPGNE H+ AF
Sbjct: 1   MTAASPWWTPDVHADRRPRLMLRNGLTTALRDWFAAQDFIEVETAALQISPGNEAHLAAF 60

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           +TE++  D  R PLYL TSPEF+CKKLLAAGE +IF     WRN E+G LH PEFTMLEW
Sbjct: 61  ATEVVGPDGARSPLYLHTSPEFACKKLLAAGERRIFSLGPVWRNRERGPLHHPEFTMLEW 120

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR  E+Y  LM+DC +++  AA  A    FSF++ +C+PF+EPE +TVA+AF RY+ IDL
Sbjct: 121 YRVGETYGSLMRDCADLLALAATRAGATRFSFRDRDCDPFAEPERLTVADAFTRYSGIDL 180

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             T+      DR  LY    +AG+R A DD+W+D+FSR+++EKIEPNLGI   TIL  YP
Sbjct: 181 LATVAADGSTDREALYAALIKAGLRTAPDDSWADLFSRVMVEKIEPNLGIGRATILCEYP 240

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
             E+ALA   P D R  +RFELY C +EL N   EL DP EQR RF  EM EK++IY E 
Sbjct: 241 VAEAALARPSPGDARVAERFELYCCGVELANGFGELTDPAEQRRRFILEMDEKERIYGER 300

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           YP+DEDFLA L  MPQ+SGIA+GFDRL ML TGA  I +VIWTP +
Sbjct: 301 YPLDEDFLAALAIMPQASGIALGFDRLAMLATGARKIEDVIWTPVT 346


>gi|190893894|ref|YP_001980436.1| lysyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190699173|gb|ACE93258.1| lysyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 353

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 188/342 (54%), Positives = 238/342 (69%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW    H  RRPFL+ RN IQ++LR +F    FIE+D+  LQ SPGNE H+ AF+TE
Sbjct: 7   ASPWWTPSVHADRRPFLIGRNAIQAALRGFFAREDFIEVDTAVLQVSPGNEAHLHAFATE 66

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            +  D  + P YL TSPEF+CKKLLAAGE++I CFAH +RN E+G LH PEFTMLEWYRA
Sbjct: 67  ALTTDGQKAPFYLHTSPEFACKKLLAAGEQRISCFAHVYRNRERGPLHHPEFTMLEWYRA 126

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            ESY  LM DC+ I+  AAE        ++   C+PF+ PE ++VAEAF R+A IDL  +
Sbjct: 127 GESYYSLMMDCVRILALAAETVKTDKLGYRGAACDPFTGPERVSVAEAFERHAGIDLLAS 186

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L  + +  GIRVA DD W+D+FSR+L++KIEP+LG    TILD YP  E
Sbjct: 187 VAADGSTDREHLAAELRSVGIRVADDDGWADLFSRVLVDKIEPHLGFGRITILDEYPVSE 246

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     DPR  +RFELYAC +EL N   EL +  EQ+ RFE EM EK ++Y ETYPI
Sbjct: 247 AALARPSARDPRVAERFELYACGVELANGFGELTNAAEQKRRFEIEMAEKMRVYGETYPI 306

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DEDFLA L+ MP++SGIA+GFDRLVML TGA+ I++V+W P 
Sbjct: 307 DEDFLAALSSMPEASGIALGFDRLVMLATGASRIDQVLWAPV 348


>gi|241206811|ref|YP_002977907.1| Lysine--tRNA ligase [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860701|gb|ACS58368.1| Lysine--tRNA ligase [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 353

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 189/342 (55%), Positives = 239/342 (69%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW    H  RRPFL+ RN IQ++LR +F    FIE+D+  LQ SPGNE H+ AF+TE
Sbjct: 7   ASPWWTPSVHADRRPFLIGRNAIQAALRGFFAREDFIEVDTAVLQVSPGNEAHLHAFATE 66

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            +  D  + P YL TSPEF+CKKLL AGEE+I CFAH +RN E+G LH PEFTMLEWYRA
Sbjct: 67  ALTTDGQKAPFYLHTSPEFACKKLLTAGEERISCFAHVYRNRERGPLHHPEFTMLEWYRA 126

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            ESYE LM DC+ I+  AAE       +++    +PF+ PE I+VAEAF R+A IDL  +
Sbjct: 127 GESYESLMMDCVRILALAAETVKTGKLAYRGGESDPFAGPERISVAEAFQRHAGIDLLAS 186

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L  + ++ G+RVA DD W+D+FSR+L+EKIEP+LG    TILD YP  E
Sbjct: 187 VAADGSTDRDHLAAETKRVGMRVADDDGWADLFSRVLVEKIEPHLGFGRITILDEYPVSE 246

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     D R  +RFELYAC +EL N   EL +  EQR RFE EM EK ++Y ETYPI
Sbjct: 247 AALARPSARDARVAERFELYACGVELANGFGELTNAAEQRRRFEIEMAEKARVYGETYPI 306

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DEDFLA L+ MP++SGIA+GFDRLVML TGA++I++V+W P 
Sbjct: 307 DEDFLAALSLMPEASGIALGFDRLVMLATGASHIDQVLWAPV 348


>gi|300934636|ref|ZP_07149892.1| lysyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 535

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 86/370 (23%), Positives = 140/370 (37%), Gaps = 24/370 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        D   R R   L            R  +  +LR       F+E+++  
Sbjct: 172 LRPLPVAHKEMSEDTRIRHRYTDLIMREQARKNAMTRIKVMRALRNALERRGFLELETPM 231

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 232 LQTLHGGAA-ARPFITHS---NALDIDLYLRIAPELFLKRAVVGGLDRVFEVNRNFRNEG 287

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF MLE Y+A+  Y         II+  A                 +   E  
Sbjct: 288 VDSSHSPEFAMLETYQAYGDYNTAATATREIIQEVAIEVFGTTKVTLVDGTEYDLGGEWP 347

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIE 224
            I +  +             +         L   A+  G+ V          +   +   
Sbjct: 348 EIKMYPSLNEALQKKHPGQPEVTIDSTVEELKELAKVVGLEVTAKGGWGHGKLVEELWEH 407

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E    ++    +  +P   S L   + ++P  T++++LY    EL     EL+DP+ Q
Sbjct: 408 LCEDQ--LDGPIFVRDFPVETSPLVRQHRSEPGVTEKWDLYVRGFELATGYSELIDPVIQ 465

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RFE + +      +E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E I
Sbjct: 466 RERFEDQARLAAGGDDEAMVLDEDFLAAMEQGMPPTAGTGMGIDRLLMALTGLG-IRETI 524

Query: 344 WTPFSQSNQE 353
             P  +  ++
Sbjct: 525 LFPLVKPERD 534


>gi|305680501|ref|ZP_07403309.1| lysine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305660032|gb|EFM49531.1| lysine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 541

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 143/371 (38%), Gaps = 25/371 (6%)

Query: 1   MHQIPS-----------QP-WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P            +  + +     + R   L R  +  +LR Y     F+E+++  
Sbjct: 177 LRPLPVAFADMSEDMRVRHRYTDLIMREKARENALTRIKVMRALRNYLESQGFLEVETPM 236

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 237 LQTLHGGAA-ARPFVTHS---NALDIDLYLRIAPELYLKRCVVGGIERVFEVNRNFRNEG 292

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF---SEP 165
               H PEF MLE Y+A  +Y+   +   N+I+  A                     +E 
Sbjct: 293 VDSSHSPEFAMLETYQAWGTYDDCAELIKNLIQDVAMEVFGSTTVTLADGSEYDLGGAEW 352

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILI 223
             I +  +             +         L   A   G+ V          +   +  
Sbjct: 353 PTIEMYPSLNEALQRKFPGQPEVTVNSTVAELREIADAVGLDVPAKGGWGHGKLVEELWE 412

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
              E    +     +  +P   S L   + ++P  T++++LY    EL     EL+DP+ 
Sbjct: 413 LLCEDQ--LEGPIFVRNFPVETSPLTRQHRSEPGVTEKWDLYVRGFELATGYSELVDPVI 470

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE + +       E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E 
Sbjct: 471 QRERFEDQARLAAGGDEEAMVLDEDFLAAMEQGMPPTAGAGMGIDRLLMALTGLG-IRET 529

Query: 343 IWTPFSQSNQE 353
           +  P  +  ++
Sbjct: 530 VLFPLVKPERD 540


>gi|2501025|sp|Q43776|SYK_SOLLC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1147585|emb|CAA64223.1| Lysyl-tRNA synthetase [Solanum lycopersicum]
          Length = 588

 Score =  298 bits (763), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 157/366 (42%), Gaps = 29/366 (7%)

Query: 5   PSQP-WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
           P      +++  YR+R                R  I S +R +    +F+E+++ S+  +
Sbjct: 229 PESYVLRDQETRYRQRYLDLMMNPEVRALFRTRARIISYIRSFLDNLEFLEVETPSMNLT 288

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
            G  +  R F T     + +   L ++ SPE   KKL+  G ++++     +RN      
Sbjct: 289 AGGAS-ARPFITH---HNELDTELLIRVSPELYLKKLVVGGFDRVYELGKHFRNEGMDLT 344

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSE 164
           H PEFTM E Y A+  Y  LM     ++    +          +        +  +    
Sbjct: 345 HSPEFTMCELYMAYADYNDLMDLTEQLLSGMVKDLTGSYKIRYHANGLDNEPIEIDFTPP 404

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
              I +     + ANI +    D   +     L    ++  ++     T + +  +++  
Sbjct: 405 FRKIDMLSELEKVANISIP--RDLSSESANKHLVDVCEKFDVKCPPPHTTTRLLDKLVGH 462

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            IE N      T +  +P   S LA    ++P  T+RF L+    ELC+A  EL DP  Q
Sbjct: 463 FIEVNC--INPTFIINHPEIMSPLAKSRRSEPGLTERFNLFVNRRELCDAYTELNDPTAQ 520

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RF +++++++   +E   +DE F+  L   +P + G+ MG DRL ML+T + N+ EVI
Sbjct: 521 RERFAEQLKDRQLGDDEAMDLDESFITALEYGLPPTGGLGMGIDRLTMLLTDSQNVKEVI 580

Query: 344 WTPFSQ 349
             P  +
Sbjct: 581 LFPAMR 586


>gi|125544665|gb|EAY90804.1| hypothetical protein OsI_12406 [Oryza sativa Indica Group]
          Length = 630

 Score =  298 bits (763), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 83/351 (23%), Positives = 148/351 (42%), Gaps = 26/351 (7%)

Query: 9   WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R+ + S +R++     F+E+++  +    G   
Sbjct: 247 LRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMMNMIAGGAA 306

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LY++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 307 -ARPFVTH---HNELNMRLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 362

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T  E+Y A+  Y  LMK    ++    +          + N      P  I     F + 
Sbjct: 363 TTCEFYMAYADYNDLMKLTETMLSGMVKELTGGYKIKYHANGVEK-PPIEIDFTPPFRKI 421

Query: 178 ANIDLGTTL-------DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
             ID    +       D         L     +  ++     T + +  +++   +E   
Sbjct: 422 DMIDQLEAMAKLNIPKDLSSDEANKYLIDACAKYDVKCPPPQTTTRLLDKLVGHFLEETC 481

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL DP+ QR RFE+
Sbjct: 482 V--NPTFIINHPEIMSPLAKWHRSRPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFEE 539

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           ++++++   +E   +DE F   L   +P + G  +G DRL ML+T + NI 
Sbjct: 540 QLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLTMLLTDSQNIK 590


>gi|27904870|ref|NP_777996.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|31077002|sp|Q89AC5|SYK_BUCBP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|27904268|gb|AAO27101.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 500

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 89/373 (23%), Positives = 159/373 (42%), Gaps = 34/373 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +PS+     +++  YR+R                R++I  ++R+Y ++ +F+E+++ 
Sbjct: 137 LKPLPSKFHGLSDQETRYRQRYLDLISNRTLCSIFKIRSLIFINIRKYMLKKKFLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   LYL+ SPE   K+L+  G  KIF    ++RN 
Sbjct: 197 MMQNIPGGAS-ARPFITH---HNTLEIDLYLRISPELYLKRLIVGGFNKIFEINKSFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI-IRCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+ +Y  +M     + +    E+             +   +  
Sbjct: 253 GISTRHNPEFTMMEVYMAYSNYHDMMNFTEKLLMFLVKEIVGNSQVKHGTNIIDFKKKFF 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+ EA  +Y       ++   D  D   +    ++ GI V        +   I  + +
Sbjct: 313 RCTLKEAILKY-----NPSIRLSDLNDEVKMNKIVKKLGINVKKKLNAGQLILEIFNKTV 367

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP   S L+     +     RFEL+    E+ N   EL D  +Q+ 
Sbjct: 368 EKK--LIQPTFILDYPVEVSPLSRRSDVNKNVVDRFELFISGYEIGNGFSELNDADDQKK 425

Query: 287 RFEKEMQEKKKIY--------NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
           RF  + +    I         ++    D D++  L   +P +SG+ +G DRL ML+T   
Sbjct: 426 RFLMQCKLSHNINNLNKISSFDKHILYDSDYITALEYGLPPTSGLGIGIDRLTMLLTNQK 485

Query: 338 NINEVIWTPFSQS 350
           +I +VI+ P  + 
Sbjct: 486 SIRDVIFFPILKP 498


>gi|302206884|gb|ADL11226.1| Lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|308277138|gb|ADO27037.1| Lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 518

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 84/366 (22%), Positives = 140/366 (38%), Gaps = 22/366 (6%)

Query: 1   MHQIP-----------SQP-WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P            +  + +       R   L R  +  SLR +     F+E+++  
Sbjct: 159 LRPLPVAFADMSEDTRIRHRYTDLIMREEARNNALTRIKVMRSLRNFLESRGFLEVETPM 218

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 219 LQTLHGGAA-ARPFETHS---NALDIDLYLRIAPELYLKRCVVGGIERVFEVNRNFRNEG 274

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF+MLE Y+A+ +Y+   K   ++I+  A+                +   E  
Sbjct: 275 VDSSHSPEFSMLETYQAYGTYDDGAKLHQDMIQYIAKDVFGSTTVTLADGTEYDLGGEWP 334

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +  +             +         L   A+  G+              I     
Sbjct: 335 SIEMYPSLNEALARKFPGQPEVTIHSTVEELGGIAKAIGLEPGKGWGHGKFVEEIWEFLC 394

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  +P   S L   + +    T++++LY    EL     EL+DP+ QR 
Sbjct: 395 EDQ--LTGPIFVRDFPVETSPLTRDHRSKEGVTEKWDLYVRGFELATGYSELVDPVIQRE 452

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +      +E   +DEDFL  +   MP +SG  MG DRL+M +TG   I E +  
Sbjct: 453 RFEDQARLAAGGDDEAMVLDEDFLTAMEQGMPPTSGTGMGIDRLLMALTGLG-IRETVLF 511

Query: 346 PFSQSN 351
           P  +  
Sbjct: 512 PMVKPE 517


>gi|300859194|ref|YP_003784177.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686648|gb|ADK29570.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|302331450|gb|ADL21644.1| Lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 518

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 84/366 (22%), Positives = 140/366 (38%), Gaps = 22/366 (6%)

Query: 1   MHQIP-----------SQP-WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P            +  + +       R   L R  +  SLR +     F+E+++  
Sbjct: 159 LRPLPVAFADMSEDTRIRHRYTDLIMREEARNNALTRIKVMRSLRNFLESRGFLEVETPM 218

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 219 LQTLHGGAA-ARPFETHS---NALDIDLYLRIAPELYLKRCVVGGIERVFEVNRNFRNEG 274

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF+MLE Y+A+ +Y+   K   ++I+  A+                +   E  
Sbjct: 275 VDSSHSPEFSMLETYQAYGTYDDGAKLHQDMIQYIAKDVFGSTTVTLADGTEYDLGGEWP 334

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +  +             +         L   A+  G+              I     
Sbjct: 335 SIEMYPSLNEALARKFPGQPEVTIHSTVEELGGIAKAIGLEPGKGWGHGKFVEEIWEFLC 394

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  +P   S L   + +    T++++LY    EL     EL+DP+ QR 
Sbjct: 395 EDQ--LTGPIFVRDFPVETSPLTRDHRSKEGVTEKWDLYVRGFELATGYSELVDPVIQRE 452

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +      +E   +DEDFL  +   MP +SG  MG DRL+M +TG   I E +  
Sbjct: 453 RFEDQARLAAGGDDEAMVLDEDFLTAMEQGMPPTSGTGMGIDRLLMALTGLG-IRETVLF 511

Query: 346 PFSQSN 351
           P  +  
Sbjct: 512 PMVKPE 517


>gi|219870540|ref|YP_002474915.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219690744|gb|ACL31967.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 483

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 90/344 (26%), Positives = 153/344 (44%), Gaps = 26/344 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     +++  YR+R              + R+ + S +R++F+E  FIE+++ 
Sbjct: 146 LRPLPNKHKGLTDQETRYRQRYLDLIANEESRRAFVIRSKVVSGIRQFFLEKDFIEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 206 MLQVIPGGAA-AKPFITH---HNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y+A+  Y  LM +   ++R  A ++       +     +     E
Sbjct: 262 GVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRKLALDILGTTTVPYGEYVFDFGKPFE 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+ EA  +Y N      +   D  D       A+   I +        I + I  E  
Sbjct: 322 RITMHEAIVKYGN-----GISMDDLHDFDKAVAIAKGLNIEIQKSWGLGSIVNAIFEEVA 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  
Sbjct: 377 EHQ--LIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRL 329
           RF+ ++  K+   +E    D+DF+  L   +P ++G  +G DR 
Sbjct: 435 RFQAQVAAKEAGDDEAMFYDDDFVVALEHGLPPTAGEGLGIDRF 478


>gi|322436022|ref|YP_004218234.1| lysyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321163749|gb|ADW69454.1| lysyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 624

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/395 (23%), Positives = 162/395 (41%), Gaps = 51/395 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
             P       +     R   +KR +I  +LR +F    ++E+++  +    G     R F
Sbjct: 226 PTPDPH--VTEAPPNVREVFVKRALILRALRTFFDSRGYLEVETPMMHSIAGGAA-ARPF 282

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           +T     + +   LYL+ +PE   K+L+  G ++++     +RN      H PEFTMLE+
Sbjct: 283 TTR---HNALDMELYLRIAPELYLKRLVVGGMDRVYEINRNFRNEGVSTKHNPEFTMLEF 339

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           Y+A+ +Y  LM     +I+  A   N    +  N      S  +  ++ EA  ++   + 
Sbjct: 340 YQAYANYHDLMDLTEELIKFVAMEVNGSYKTRFNGVDIDLSVWKKYSMREAIIKFWRPNW 399

Query: 183 GTTLDNPDQPDRHLLY----------------LQAQQA-GIRVAH--------------- 210
               +  D                          A+   GI V                 
Sbjct: 400 APFFEYEDNDFMKASRWLNKLSQSRDLLASRLEIAKSYDGIEVETLNPIYFPEDFTDHKF 459

Query: 211 ----------DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
                      +      + +     EP+  +   TI+  +P   S L+ + P +P + +
Sbjct: 460 LVATIAALEGGEPLGKSIASVFEFLAEPH--LVQPTIIYDFPLAVSPLSKVKPDEPDWVE 517

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
           RFE Y    E+ NA  EL DP++Q  RFE ++ EK +  +E   +D D++  L   +P +
Sbjct: 518 RFEFYIGGFEVGNAFSELNDPVDQLSRFEAQVAEKARGDDEAMEMDADYVRALQYGLPPT 577

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
            G  +G DRL M++TG  +I +VI  P  +  Q++
Sbjct: 578 GGEGIGIDRLTMILTGQRSIRDVILFPLMRPIQKQ 612


>gi|327191735|gb|EGE58737.1| lysyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 353

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 189/342 (55%), Positives = 238/342 (69%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW    H  RRPFL+ RN IQ++LR +F    FIE+D+  LQ SPGNE H+ AF+TE
Sbjct: 7   ASPWWTPSVHADRRPFLIGRNAIQAALRGFFAREDFIEVDTAVLQVSPGNEAHLHAFATE 66

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            +  D  + P YL TSPEF+CKKLLAAGE++I CFAH +RN E+G LH PEFTMLEWYRA
Sbjct: 67  ALTTDGQKAPFYLHTSPEFACKKLLAAGEQRISCFAHVYRNRERGPLHHPEFTMLEWYRA 126

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            ESY  LM DC+ I+  AAE        ++   C+PF+ PE ++VAEAF R+A IDL  +
Sbjct: 127 GESYYSLMMDCVRILALAAETVKTDKLGYRGAACDPFTGPERVSVAEAFERHAGIDLLAS 186

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L  + +  GIRVA DD W+D+FSR+L+EKIEP+LG    TILD YP  E
Sbjct: 187 VAADGSTDREHLAAELRSVGIRVADDDGWADLFSRVLVEKIEPHLGFGRITILDEYPVSE 246

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     DPR  +RFELYAC +EL N   EL +  EQR RFE EM EK ++Y ETYPI
Sbjct: 247 AALARPSARDPRVAERFELYACGVELANGFGELTNAAEQRRRFEIEMAEKMRVYGETYPI 306

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           D+DFLA L+ MP++SGIA+GFDRLVML TGA+ I++V+W P 
Sbjct: 307 DDDFLAALSSMPEASGIALGFDRLVMLATGASRIDQVLWAPV 348


>gi|13476826|ref|NP_108395.1| lysyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|14027587|dbj|BAB53856.1| lysyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 348

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 188/345 (54%), Positives = 232/345 (67%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
              + PWW    H  RRP L+ RN + ++ RE+F    FIE+++ +LQ SPGNE H+ AF
Sbjct: 1   MTAASPWWTPHVHADRRPRLMLRNGLTAAFREWFAAQDFIEVETAALQVSPGNEAHLAAF 60

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           +TE +  D  R PLYL TSPEF+CKKLLAAGE +IF     WRN E+G LH PEFTMLEW
Sbjct: 61  ATEAVGPDGARAPLYLHTSPEFACKKLLAAGEVRIFSLGAVWRNRERGPLHHPEFTMLEW 120

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR  E+Y  LM+DC +++   A  A    FSF+   C+PF EPE +TVA+AF R+A IDL
Sbjct: 121 YRVGETYGSLMRDCADLLALVARRAGATRFSFRGRECDPFVEPERLTVADAFTRHAGIDL 180

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             T+      DR  LY    +AG+R A DD+W+D+FSR+++EKIEPNLGI   TIL  YP
Sbjct: 181 LATVAADGGTDRDTLYAALVRAGLRTAPDDSWADLFSRVMVEKIEPNLGIGRATILCEYP 240

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
             E+ALA   P D R  +RFELY C +EL N   EL D  EQR RF  EM EK++IY E 
Sbjct: 241 VAEAALARPSPHDARVAERFELYCCGVELANGFGELTDAEEQRRRFILEMDEKERIYGER 300

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           YP+DEDFLA L  MPQ+SGIA+GFDRLVML TGA  I +VIWTP 
Sbjct: 301 YPLDEDFLAALAIMPQASGIALGFDRLVMLATGAQKIEDVIWTPV 345


>gi|309811638|ref|ZP_07705417.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434439|gb|EFP58292.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 1108

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 89/368 (24%), Positives = 152/368 (41%), Gaps = 21/368 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  IPS      N +   R+R             L  R+   S+LR  F E  ++E+++ 
Sbjct: 748  LRPIPSDHTGFTNPEARVRQRYLDLIVNKDSANLLRARSRGVSALRRAFEERGYMEVETP 807

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  +  R F T +   +     LYL+ +PE   K+L   G ++IF     +RN 
Sbjct: 808  MLQAVHGGAS-ARPFRTHI---NAYNADLYLRIAPELFLKELAVGGMDRIFELNRNFRNE 863

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT +E Y AH  Y  +      ++   A   + +  + +            
Sbjct: 864  GADATHNPEFTSVEAYAAHGDYNTMRVLTRELVLEVATAIHGEPVAVRPDGHGGVERLRL 923

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +   T            +   A    +  A   T  ++   +  E +E
Sbjct: 924  DHEWPVVPVHEAVSQATGTTLTSNTPLEEVRAVADAHDVHWAETMTAGEVVLELYDELVE 983

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                         +P   S L   +  DP+ ++R++L A   E+  A  EL+DP++QR+R
Sbjct: 984  GQ--TTMPVFYTDFPLETSPLTRTHRTDPKLSERWDLVAFGAEIGTAYSELVDPVDQRNR 1041

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              ++  +      E   +DE+FLA L   MP + G+ +G DRL+M++TG NNI   +  P
Sbjct: 1042 LTEQSFKAAAGDPEAMEVDENFLAALEYAMPPTGGLGIGVDRLIMMLTG-NNIRATLAFP 1100

Query: 347  FSQSNQEE 354
            F++ N+ +
Sbjct: 1101 FTRPNEGQ 1108


>gi|156096490|ref|XP_001614279.1| lysine-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148803153|gb|EDL44552.1| lysine-tRNA ligase, putative [Plasmodium vivax]
          Length = 585

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 80/371 (21%), Positives = 153/371 (41%), Gaps = 28/371 (7%)

Query: 1   MHQIPSQP-WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P +    + +   R+R              + R  I + LR +  +  FIE+++ +
Sbjct: 220 LHMLPMKYGLKDTEIRCRQRYLDLMINENTRSTFITRTKIINYLRNFLNDKGFIEVETPT 279

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G  +  R F T     + +   L+L+ + E   K L+  G +K++     +RN  
Sbjct: 280 MNLVAGGAS-ARPFITH---HNDLDLDLFLRIATELPLKMLIVGGIDKVYEIGKVFRNEG 335

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF--------SFQNVNCN 160
               H PEFT  E+Y A+  +  L+K   +                          V  +
Sbjct: 336 IDNTHNPEFTSCEFYWAYADFYDLIKWSEDFFSSLVMHLFGTYKILYNKDGPEKDPVEID 395

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  +++ E   +  N  L    D+P+  ++  +    ++  I + +  T + +  +
Sbjct: 396 FTPPYPKVSIVEELEKLTNTKLEQPYDSPETINK--MINLIKENKIEMPNPPTAAKLLDQ 453

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +    IE     N    +  +P   S LA  + + P  T+R E++ C  E+ NA  EL D
Sbjct: 454 LASHFIENKYP-NQPFFIIEHPQIMSPLAKYHRSKPGLTERLEMFICGKEVLNAYTELND 512

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P +Q+  F  + ++++K   E +  D  F   L   +P + G+ +G DR+ M +T  N I
Sbjct: 513 PFKQKECFSAQQKDREKGDAEAFQFDASFCTSLEYGLPPTGGLGLGIDRIAMFLTNKNCI 572

Query: 340 NEVIWTPFSQS 350
            +VI  P  + 
Sbjct: 573 KDVILFPTMRP 583


>gi|225871967|ref|YP_002753421.1| lysine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225792518|gb|ACO32608.1| lysine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 558

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 95/416 (22%), Positives = 167/416 (40%), Gaps = 68/416 (16%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P +     D    YR+R              +KR  + ++ R++F    ++E+++ 
Sbjct: 142 MLAMPDKYHGLEDVELRYRQRYVDLFMNPEVREVFVKRAKVLAATRKFFDSRGYVEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G     R F T     + +   LYL+ +PE   K+L+  G ++++     +RN 
Sbjct: 202 MMQPIAGGAA-ARPFITH---HNALDIDLYLRIAPELYLKRLVVGGLDRVYEINRNFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC-------- 159
                H PEFTMLE+Y+A+ +Y  LMK     I   A+  N    +   +          
Sbjct: 258 GISTQHNPEFTMLEFYQAYANYHDLMKLTEEFITFVAQEVNGTTVTEFPIPKGPRAGEVV 317

Query: 160 -NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD------------------------- 193
               ++    T+ EA   +   + G      +                            
Sbjct: 318 EIDLAKWRRFTMREAIIEFWPDEFGAKPTEAEIAFSIDQVLMRAIRMMHAHFPNWATVFP 377

Query: 194 ---RHLLYLQAQQAGIR-----------VAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                  + +A+ A  +           V          S +     E +  +   TI+ 
Sbjct: 378 PETEEQGWAEAEHALKKLTIQIQILLQHVERGLPHGKAISELFELLAEEH--LIEPTIIY 435

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P   S L+   P +P + +RFE Y    EL NA  EL DP EQ+ RFE ++ E+++  
Sbjct: 436 DFPLAVSPLSKQKPDEPEWVERFEFYIGGFELGNAFSELNDPSEQQRRFEMQLAERERGD 495

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
           +E + +D D++  L   +P + G  +G DRL M++TG+ +I +VI  P  +    E
Sbjct: 496 DEAHQMDADYVRALGYGLPPTGGEGIGIDRLTMVLTGSRSIRDVILFPLLRPQVRE 551


>gi|271970322|ref|YP_003344518.1| lysyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270513497|gb|ACZ91775.1| lysyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 500

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 144/366 (39%), Gaps = 29/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R+R   L            R+ +  ++R+++    ++E+++ 
Sbjct: 146 LRPLPEKHAGLTDPEARVRQRYLDLIVNDEARKMAYTRSAVVRAMRDFWHGEGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  T  R F T +   +     LYL+ + E   K+L+  G EK+F     +RN 
Sbjct: 206 MLQPIHGGAT-ARPFKTHI---NAYSMELYLRIAIELYLKRLVVGGIEKVFEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF--SEP 165
                H PEFTMLE Y  +  Y  +      +I+ A   A                  E 
Sbjct: 262 GADATHNPEFTMLEAYGTYLDYNDMADLTQRMIQSAVVAALGHSVVTHEGQEIDLGLPEW 321

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             IT+      Y ++      +   +     +   A    I          +   I    
Sbjct: 322 PRITL------YGSVSEALGEEITTETPLEHVRKHADAHEIHWDPKWGQGKLVQEIFEAL 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S L   +  +P  T++++L     EL  A  EL+DP+EQR
Sbjct: 376 VEHT--LIQPTFVMDYPLETSPLTRQHRDNPLLTEKWDLIGFGTELGTAYSELVDPVEQR 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  ++         E   +DEDFL  L   MP + G+ +G DRLVM  TG  NI E I 
Sbjct: 434 RRLTEQSLLAAGGDPEAMQLDEDFLTALEYAMPPTGGMGLGVDRLVMAFTG-KNIRETIL 492

Query: 345 TPFSQS 350
            P  + 
Sbjct: 493 FPLVKP 498


>gi|240047435|ref|YP_002960823.1| Lysyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985007|emb|CAT05000.1| Lysyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 490

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 159/369 (43%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWWNRD-------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P Q +   D              + + R   +KR+ I S +R +F    ++E+D+ 
Sbjct: 135 LKPLPDQYYGLSDQEEKYRKRYLDLIVNTKTRDTFIKRSRIVSYIRHFFDNQNYLEVDTP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  +  R F T     + + +  YL+ + E   KKLL  G ++++     +RN 
Sbjct: 195 VLQPILGGAS-ARPFITHY---NSLHRDYYLRIATELPLKKLLVGGIDRVYEIGKIFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI--FSFQNVNCNPFSEP 165
                H PEFT +E+Y+A+ + E +M+   N+ +   E  N      +F     +     
Sbjct: 251 GVDTTHNPEFTSIEFYQAYANLETMMQQTENLFQFLIEKINNSNPVLNFGEYQIDFSKPF 310

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             I + E  ++           N  Q         AQ   I+V    T   I + +  + 
Sbjct: 311 ARINMVEEVSKKVG-------HNFYQISEEQAKQIAQDHDIKVEPFYTKGHIINELFEKY 363

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           IE    +   T +  +P   S LA   P +  FT+R EL+    E  N  +EL DP +Q 
Sbjct: 364 IEEE--LIQPTFVTGHPIEISPLAKKDPKNNNFTQRAELFIAKKEFANMFNELNDPFDQL 421

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE ++ EK     E   ID DF+  L   +P + G  +G DRLVML T   +I EVI 
Sbjct: 422 ARFESQISEKNMGNEEASEIDYDFVESLYYGLPPAGGCGIGIDRLVMLFTNNESIREVIL 481

Query: 345 TPFSQSNQE 353
            P  ++ +E
Sbjct: 482 YPQLKTKKE 490


>gi|221058405|ref|XP_002259848.1| lysine--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193809921|emb|CAQ41115.1| lysine--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 585

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 79/372 (21%), Positives = 152/372 (40%), Gaps = 30/372 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-------------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +    +D   R R                + R  I + LR +  +  FIE+++ 
Sbjct: 220 LHMLPMKY-GLKDTEIRSRQRYLDLMINESTRSTFITRTKIINYLRNFLNDRGFIEVETP 278

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           ++    G   + + F T     + +   LYL+ + E   K L+  G +K++     +RN 
Sbjct: 279 TMNLVAGGA-NAKPFITH---HNDLDLDLYLRIATELPLKMLIVGGIDKVYEIGKVFRNE 334

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF--------SFQNVNC 159
                H PEFT  E+Y A+  +  L+K   +                          +  
Sbjct: 335 GIDNTHNPEFTSCEFYWAYADFYDLIKWSEDFFSTLVMHLFGTYKILYNKDGPDKDPIEI 394

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       +++ E   +  N  L    D+P+  ++  +    ++  I + +  T + +  
Sbjct: 395 DFTPPYPKVSIVEELEKLTNTKLEQPFDSPETINK--MINLIKENKIEMPNPPTAAKLLD 452

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           ++    IE     N    +  +P   S LA  + + P  T+R E++ C  E+ NA  EL 
Sbjct: 453 QLASHFIENQYP-NKPFFIIEHPQIMSPLAKYHRSKPGLTERLEMFICGKEVLNAYTELN 511

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP +Q+  F  + ++++K   E +  D  +   L   +P + G+ +G DR+ M +T  N 
Sbjct: 512 DPFKQKECFSAQQKDREKGDAEAFQFDAPYCTSLEYGLPPTGGLGLGIDRITMFLTNKNC 571

Query: 339 INEVIWTPFSQS 350
           I +VI  P  + 
Sbjct: 572 IKDVILFPTMRP 583


>gi|209551369|ref|YP_002283286.1| lysine--tRNA ligase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209537125|gb|ACI57060.1| Lysine--tRNA ligase [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 353

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 191/342 (55%), Positives = 244/342 (71%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW    H  RRPFL+ RN IQ++LR +F    F+E+D+ +LQ SPGNE H+ AF+TE
Sbjct: 7   ASPWWTPSVHADRRPFLIGRNAIQAALRGFFAREDFLEVDTATLQISPGNEAHLHAFATE 66

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            +  D  R P YL TSPEF+CKKLLAAGEE+I CFAH +RN E+G LH PEFTMLEWYRA
Sbjct: 67  ALTTDGQRAPFYLHTSPEFACKKLLAAGEERISCFAHVYRNRERGPLHHPEFTMLEWYRA 126

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            ESYE LM DC+ I+  AAE A  +  +++    +PF+ PE I+VAEAF R+A IDL ++
Sbjct: 127 GESYESLMMDCVRIVALAAETAKTEKLAYRGGESDPFAGPERISVAEAFERHAGIDLLSS 186

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L  + ++ G+RVA DD W+D+FSR+L+EKIEP+LG    TILD YP  E
Sbjct: 187 VAAGGSTDRDHLAAEMKRVGMRVADDDGWADLFSRVLVEKIEPHLGFGRITILDEYPVSE 246

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     DPR  +RFELYAC +E+ N   EL +  EQR RFE EM EK +IY ETYP+
Sbjct: 247 AALARPSARDPRVAERFELYACGVEIANGFGELTNAAEQRRRFEIEMAEKARIYGETYPL 306

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DEDFLA L+ MP++SGIA+GFDRLVML TGA+ I++V+W P 
Sbjct: 307 DEDFLAALSLMPEASGIALGFDRLVMLATGASRIDQVLWAPV 348


>gi|284034397|ref|YP_003384328.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283813690|gb|ADB35529.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 1117

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 156/365 (42%), Gaps = 28/365 (7%)

Query: 1    MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     + +   R+R             L  R+    +LR  F    F+E+++ 
Sbjct: 762  LHPLPDKRKGFTDPEARVRQRHLDLVTNPDALRMLRHRSTAVRALRHGFEARGFVEVETP 821

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     L+L+ +PE   K+L   G  K+F     +RN 
Sbjct: 822  MLQAVHGGA-NARPFVTHI---NAYDTDLFLRIAPELFLKRLGVGGLGKVFELNRNFRNE 877

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV-NCNPFSEPE 166
                 H PEFT +E Y+ +  Y  + +    ++   A     K    ++    +   +  
Sbjct: 878  GADATHNPEFTSVEAYQPYADYHVMRELTRELLLETAVAVFGKAVVQRDGAELDISGDWP 937

Query: 167  YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             +TV +A +R A + +              L     Q G+R   D +  ++   +  E +
Sbjct: 938  VVTVHDAVSRAAGVTIDPGTPVSR------LREICAQHGVRAGFDLSAGELVLELYDELV 991

Query: 227  EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
            EP       T    +P   S L   +  DPR  +R++L A   E+  A  EL+DP+EQR 
Sbjct: 992  EPR--TTLPTFYTDFPLETSPLPRGHRTDPRLAERWDLVAFGAEIGTAYSELVDPVEQRR 1049

Query: 287  RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            R  ++  +      E   +DEDFLA L   +P + G+ +G DR++M++TG  NI   +  
Sbjct: 1050 RLTEQSLKAAAGDPEAMSLDEDFLAALEYALPPTGGLGLGVDRILMMLTGQ-NIRATLAF 1108

Query: 346  PFSQS 350
            PF + 
Sbjct: 1109 PFVRP 1113


>gi|189219307|ref|YP_001939948.1| Lysyl-tRNA synthetase (class II) [Methylacidiphilum infernorum V4]
 gi|189186165|gb|ACD83350.1| Lysyl-tRNA synthetase (class II) [Methylacidiphilum infernorum V4]
          Length = 512

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 102/374 (27%), Positives = 148/374 (39%), Gaps = 39/374 (10%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +PSQ +   D    YR+R              LKR+ I   +RE+     FIE+++ 
Sbjct: 154 LRPLPSQWYGLLDVEARYRQRYLDLIMNPEVKRVFLKRSQIIKEIREFLHNKGFIEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G       F T     + +  PLYL+ +PE   K+LL  G EKIF     +RN 
Sbjct: 214 MMQTVAGGAA-ANPFKT---FHEALGIPLYLRIAPELYLKRLLVGGFEKIFELNRNFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF------QNVNCNP 161
                H PEFTMLE Y A+   + + K    +I   A+     +         +    N 
Sbjct: 270 GISRKHNPEFTMLEAYWAYGDCQSMAKLLEEMIVAVAQKVFGTLQFPASKQFGEAKTINL 329

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                     E        D  +                A +  I +    T +D+   +
Sbjct: 330 TPPWPRRPFKEVLCEAIGEDWFSLSG-------EEKIKVAARFEIEIKEGFTETDLCRHL 382

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             +++E          +   P     LA     DPRF + FEL     EL     EL DP
Sbjct: 383 FEKQVEAK--TMGPLFVTELPTEFVPLAKQKKEDPRFVEVFELIVNGQELAPGYSELNDP 440

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           I QR R EK+         E   IDE+FL  L   MP + GI +G DRL ML++G  +I 
Sbjct: 441 IVQRERLEKQA------GEEKQKIDEEFLLALEYGMPPAGGIGLGIDRLTMLLSGQESIR 494

Query: 341 EVIWTPFSQSNQEE 354
           +VI  P  +  +E+
Sbjct: 495 DVILFPILRPKKEQ 508


>gi|226737250|sp|Q4A5F3|SYK_MYCS5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|144575195|gb|AAZ44018.2| lysyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 491

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 161/368 (43%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR R               KR+ I S +R+YF  N ++E+++ 
Sbjct: 137 LKPLPDKFHGLSDIEEIYRHRYLDLISNEHSMEVFKKRSKIISLIRKYFDSNMYLEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L          + F T     + + +   L+ + E   KKLL  G ++++     +RN 
Sbjct: 197 FLSNYISGAA-AKPFKT---FHNALSQEFTLRIATEIPLKKLLIGGIDRVYEMGRIFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+ + E++M+    + +  A+  N K    +    N     + 
Sbjct: 253 GIDTTHNPEFTTIEFYEAYSNLEKMMQRTEELFKLIAKELNLKTLQNKGEEINLEEPFKR 312

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + +  ++   +D                   A++ G+++    T   I + +  + IE
Sbjct: 313 VDMIDEVSKATGVDFRNVT-------LEKALELAKEHGVKLKKYYTVGHIANELFEKLIE 365

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S L     +DPR+ +R EL+    E  N   EL  PIEQ  R
Sbjct: 366 KT--LVQPTFVMGHPIEISPLTYE-ASDPRYVERAELFINGKEYANMYTELSSPIEQLKR 422

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE ++ EK +  +E+  ID DF+  L   MP + G  +G DRLVML T   +I +V++ P
Sbjct: 423 FEDQLNEKAQGNDESSDIDWDFIEALKYGMPPAGGCGIGIDRLVMLFTEKESIRDVLFFP 482

Query: 347 FSQSNQEE 354
             ++ + +
Sbjct: 483 TLKNKKSQ 490


>gi|70954415|ref|XP_746255.1| lysine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56526803|emb|CAH78087.1| lysine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 516

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 155/371 (41%), Gaps = 28/371 (7%)

Query: 1   MHQIPSQP-WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P +    + +  YR+R              + R  I + LR +  +  FIE+++ S
Sbjct: 151 LHMLPMKYGLKDTEIRYRQRYLDLIVNESTRNIFITRTKIINFLRSFLNDQGFIEVETPS 210

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G  +  R F T     + +   LYL+ + E   K L+  G ++++     +RN  
Sbjct: 211 MNLVAGGAS-ARPFITH---HNDLDIDLYLRIATELPLKMLIVGGLDRVYEIGKVFRNEG 266

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF--------SFQNVNCN 160
               H PEFT  E+Y A+  Y  L+K                              +  +
Sbjct: 267 IDNTHNPEFTSCEFYWAYADYYDLIKWSEEFFSKLVYHLFGTYKILYNKDGPEKDPIEID 326

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  I++ E   +   + L    D+P+  ++  +    ++  I + +  T + +  +
Sbjct: 327 FTPPYPKISLVEELEKITKVKLEQPFDSPETINK--MINIIKENNIEMPNPPTAAKLLDQ 384

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +    IE N+  N    +  +P   S LA  + + P  T+R E++ C  E+ NA  EL D
Sbjct: 385 LASHFIE-NIYQNQXFFIIEHPQIMSPLAKYHRSKPGLTERLEMFICGKEVLNAYTELND 443

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P +Q+  F  + ++K+K   E Y  D  F   L   +P + G+ +G DR+ M +T  N I
Sbjct: 444 PFKQKECFSAQQKDKEKGDAEAYHCDAAFCTALEYALPPTGGLGLGIDRITMFLTNKNCI 503

Query: 340 NEVIWTPFSQS 350
            +VI  P  + 
Sbjct: 504 KDVILFPTMKP 514


>gi|291297601|ref|YP_003508879.1| lysyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290566821|gb|ADD39786.1| lysyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 1100

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 159/369 (43%), Gaps = 28/369 (7%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     + +   R+R             L  R  +  SLR    ++ ++E+++ 
Sbjct: 744  LHPLPDKHLGLADPEAKVRQRHLDLIVSPQARTDLRARGAVIHSLRTGLHDDGYLEVETP 803

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L   G EK+F     +RN 
Sbjct: 804  ILQAIHGGA-NARPFVTHI---NAYDMRLYLRIAPELYLKRLCVGGVEKVFELGRTFRNE 859

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                 H PEFTMLE Y+++  Y  + +  M ++R AA  A +  + +  +   +  ++  
Sbjct: 860  GVSFKHNPEFTMLEAYQSYADYNTMRELTMRLVRQAAVAAFDTTVITRDDHEIDLAADWP 919

Query: 167  YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             I + +A +      +           R  L    + A I +        I   +    +
Sbjct: 920  VIPIHQAISTALGEHIDPGTP------RDKLRQLCEAADIPLDPQWDEGAIVLEMYERLV 973

Query: 227  EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
            E        T    +P   S L   +  DPR  +R++L A   E+  A  EL+DP+EQR 
Sbjct: 974  E--HATTAPTFYSDFPTSVSPLTRQHRTDPRLAERWDLVAFGTEIGTAYSELIDPVEQRR 1031

Query: 287  RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            R  ++         E   +DEDFLA L   MP + G+ +G DRLVML+TG N I + +  
Sbjct: 1032 RLTEQSLLAAGGDPEAMELDEDFLAALEYAMPPTGGLGIGVDRLVMLLTG-NGIRQTLPF 1090

Query: 346  PFSQSNQEE 354
            P  +   ++
Sbjct: 1091 PLVKPTVDQ 1099


>gi|19553881|ref|NP_601883.1| lysyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62391524|ref|YP_226926.1| lysyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|21325459|dbj|BAC00081.1| Lysyl-tRNA synthetase class II [Corynebacterium glutamicum ATCC
           13032]
 gi|41326866|emb|CAF20710.1| LYSYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 526

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 88/370 (23%), Positives = 145/370 (39%), Gaps = 24/370 (6%)

Query: 1   MHQIPS-----------QP-WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P            +  + +     + R   L R  +  +LR Y  +  F+E+++  
Sbjct: 164 LRPLPVAFADLSEDTRVRHRYTDLIMREQARTNALTRIKVMRALRHYLEDQDFLEVETPM 223

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 224 LQTLHGGAA-ARPFETHS---NALDIDLYLRIAPELYLKRCVVGGIERVFEVNRNFRNEG 279

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF MLE Y A  +YE   K    +++  A+                +   E +
Sbjct: 280 VDSSHSPEFAMLETYEAWGTYETGAKLIKGLVQSVAQEVFGTTLVTLADGTEYDLGGEWK 339

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIE 224
            I +  +             +         L   A+  G+ V  +  W    +   I   
Sbjct: 340 VIEMYPSLNEALARKFPGQPEVTIDSTVEELREIAKVIGLSVPENGGWGHGKLVEEIWEL 399

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E    +     +  +P   S L   +   P  T++++LY    EL     EL+DP+ Q
Sbjct: 400 LCEDQ--LYGPIFVKDFPVETSPLTRQHRTKPGVTEKWDLYVRGFELATGYSELIDPVIQ 457

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RFE + +      +E   +DEDFL  +   MP +SG  MG DRL+M +TG   I E +
Sbjct: 458 RERFEDQARLAADGDDEAMVLDEDFLTAMEQGMPPTSGNGMGIDRLLMALTGLG-IRETV 516

Query: 344 WTPFSQSNQE 353
             P  +  Q+
Sbjct: 517 LFPMVKPEQK 526


>gi|66807931|ref|XP_637688.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|60466120|gb|EAL64185.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 615

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 151/365 (41%), Gaps = 25/365 (6%)

Query: 2   HQIPSQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
             IP +   +++  YR RP               R+ + + LR++ VE  ++E+D+  L 
Sbjct: 238 RPIPQK-LIDKEIRYRNRPLDFLVNPTTQKPFYIRSKMITYLRKFLVEKGYLEVDTPILS 296

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
            + G   + + F T     + +   L+L+ SPE   K+L+ +G +K+F     +RN    
Sbjct: 297 TNVGGA-NAKPFKTHS---NSLNLDLFLRISPELFLKQLIISGFDKVFEIGKQFRNEGID 352

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI----FSFQNVNCNPFSEPE 166
             H PEFT  E+Y+A+  YE +M     ++                S  ++  N     +
Sbjct: 353 LTHNPEFTTCEFYQAYADYETMMTMTEELLSGMVYDTLGSYEVVLPSNPDIKINFKGPYQ 412

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I   +         L   L + D      L     +  IR     T + I   +    +
Sbjct: 413 RINFIDKIQELTGRQLPEDLVSYDCIPE--LLDICNENNIRCKEPYTPTRILDEMASTLL 470

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP       T +  +P   S LA I+    + T+RFEL+    EL NA  EL DP EQR 
Sbjct: 471 EPLC--IQPTFIQDHPLAMSPLAKIHRNSAQRTERFELFVGGKELVNAYSELNDPKEQRK 528

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +  ++     E   +DE F   L   +P + G  +G DRL ML +    I +VI  
Sbjct: 529 RFLAQSMDRTSGDEEAQILDESFCNSLELALPPTGGWGLGIDRLCMLFSNTTTIKDVILF 588

Query: 346 PFSQS 350
           P  + 
Sbjct: 589 PTMKP 593


>gi|71894621|ref|YP_278729.1| lysyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 493

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 161/368 (43%), Gaps = 28/368 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR R               KR+ I S +R+YF  N ++E+++ 
Sbjct: 139 LKPLPDKFHGLSDIEEIYRHRYLDLISNEHSMEVFKKRSKIISLIRKYFDSNMYLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L          + F T     + + +   L+ + E   KKLL  G ++++     +RN 
Sbjct: 199 FLSNYISGAA-AKPFKT---FHNALSQEFTLRIATEIPLKKLLIGGIDRVYEMGRIFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+ + E++M+    + +  A+  N K    +    N     + 
Sbjct: 255 GIDTTHNPEFTTIEFYEAYSNLEKMMQRTEELFKLIAKELNLKTLQNKGEEINLEEPFKR 314

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + +  ++   +D                   A++ G+++    T   I + +  + IE
Sbjct: 315 VDMIDEVSKATGVDFRNVT-------LEKALELAKEHGVKLKKYYTVGHIANELFEKLIE 367

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S L     +DPR+ +R EL+    E  N   EL  PIEQ  R
Sbjct: 368 KT--LVQPTFVMGHPIEISPLTYE-ASDPRYVERAELFINGKEYANMYTELSSPIEQLKR 424

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE ++ EK +  +E+  ID DF+  L   MP + G  +G DRLVML T   +I +V++ P
Sbjct: 425 FEDQLNEKAQGNDESSDIDWDFIEALKYGMPPAGGCGIGIDRLVMLFTEKESIRDVLFFP 484

Query: 347 FSQSNQEE 354
             ++ + +
Sbjct: 485 TLKNKKSQ 492


>gi|315122583|ref|YP_004063072.1| lysyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495985|gb|ADR52584.1| lysyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 496

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 161/365 (44%), Gaps = 29/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ IP   +   D    YR+R               +R+ I S +R +   N F+E+++ 
Sbjct: 142 LNSIPETYYGLSDIETRYRKRYLDIISNPDSKLRFQQRSRIISQIRHFMENNGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            LQ   G  T    F T     + ++  +YL+ +PE   K++L +G  +++F     +RN
Sbjct: 202 ILQPIYGGAT-ADPFITH---HNILKADMYLRIAPELYLKRVLVSGLTDQVFELNRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  Y  +MK   ++          +    F     +     
Sbjct: 258 EGISSRHNPEFTMIEAYWAYTDYRDMMKLVEDLFHNLVISLYGKTDIPFGKKVISFKKPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
              ++ +       ID                 + AQ  GI V  D  W ++   +  EK
Sbjct: 318 ACKSMPQLVKEATGID------FMLLKSDQEARVAAQSIGIEVEEDAIWGEVMMNLFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           IE N  I     +  +P   S  A     + R  +RFE Y    E+CNA  EL DPIEQR
Sbjct: 372 IEKN--ILNPMHITDFPKDISPFAKEVVGESRLVERFETYCNGWEICNAFSELNDPIEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R EK++++  K   E   +DEDFL  +   MP +SG+ +G DRL+ML+T A +I +VI 
Sbjct: 430 IRMEKQLKQSHKRG-EKIILDEDFLDAMTYGMPPASGLGLGIDRLIMLLTNAPSIRDVIL 488

Query: 345 TPFSQ 349
            P  +
Sbjct: 489 FPVQR 493


>gi|297284497|ref|XP_002802605.1| PREDICTED: lysyl-tRNA synthetase isoform 2 [Macaca mulatta]
          Length = 424

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 82/361 (22%), Positives = 146/361 (40%), Gaps = 55/361 (15%)

Query: 8   PWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPG 54
            +   +++  YR+R              + R+ + + +R +  E  F+EI++  +   PG
Sbjct: 87  HFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKMVTYIRSFLDELGFLEIETPMMNIIPG 146

Query: 55  NETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQ 114
                + F T     + +   LY++ +PE   K L+  G ++++     +RN      H 
Sbjct: 147 GAV-AKPFIT---YHNELDMNLYMRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHN 202

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           PEFT  E+Y A+  Y  +                                   + + E  
Sbjct: 203 PEFTTCEFYMAYADYHDV-----------------------------------MEITEKM 227

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                + L  T     +  R +L        +      T + +  +++ E +E       
Sbjct: 228 VSALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTC--IN 285

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  +P   S LA  + +    T+RFEL+    E+CNA  EL DP+ QR  FE++ + 
Sbjct: 286 PTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKA 345

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           K    +E   IDE+F   L   +P + G  MG DR+ M +T +NNI EV+  P  +   +
Sbjct: 346 KAAGDDEAMFIDENFCTALEYGLPPTGGFGMGLDRVAMFLTDSNNIKEVLLFPAMKPEDK 405

Query: 354 E 354
           +
Sbjct: 406 K 406


>gi|238810135|dbj|BAH69925.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 508

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 90/363 (24%), Positives = 155/363 (42%), Gaps = 28/363 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D   R              R   + R  I   +R+YF +  ++E ++ 
Sbjct: 156 LKPLPDKFHGLTDTEERYRHRYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L          + F+T     + + +   L+ + E   KKL+  G E+++     +RN 
Sbjct: 216 FLHDYLSGAA-AKPFTTH---HNSLNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+ + E +M     +I+   +   +  F    V  +     + 
Sbjct: 272 GYDTTHNPEFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTNGVEVDLSKPFKR 331

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + +  ++           N  +         A+   I++    T   I + +  E +E
Sbjct: 332 VNMIDEVSKKTG-------KNFRKITLEEAIEVAKAYKIKIEKFFTIGHIINALYEELVE 384

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P   +   T L  +P   S L+     DPRFT+R EL+    E  N   EL DPI+Q  R
Sbjct: 385 PT--LIQPTFLYGHPIEISPLSAKSD-DPRFTERAELFINTKEYANMYTELSDPIDQLER 441

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE +++EK K  +E   ID DF+  L   MP + G  +G DRLVML+T  ++I +V+  P
Sbjct: 442 FESQLEEKNKGNDEASDIDYDFVDALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFP 501

Query: 347 FSQ 349
             +
Sbjct: 502 TLK 504


>gi|116254325|ref|YP_770163.1| lysyl-tRNA synthetase-like protein [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115258973|emb|CAK10082.1| putative lysyl-tRNA synthetase homolog [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 353

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 191/342 (55%), Positives = 238/342 (69%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW    H  RRPFL+ RN IQ++LR +F    FIE+D+  LQ SPGNE H+ AF+TE
Sbjct: 7   ASPWWTPSVHADRRPFLIGRNAIQAALRGFFAREDFIEVDTAVLQVSPGNEAHLHAFATE 66

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            +  D  + P YL TSPEF+CKKLLAAGEE+I CFAH +RN E+G LH PEFTMLEWYRA
Sbjct: 67  ALTTDGQKAPFYLHTSPEFACKKLLAAGEERISCFAHVYRNRERGPLHHPEFTMLEWYRA 126

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            ESYE LM DC+ I+  A E       +++    +PF+ PE I+VAEAF R+A IDL  +
Sbjct: 127 GESYESLMMDCVRILALATETVKTGKLAYRGAESDPFAGPERISVAEAFERHAGIDLLAS 186

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L  + ++ G+RVA DD W+D+FSR+L+EKIEP LG  C TILD YP  E
Sbjct: 187 VAADGSTDRDHLAAETKRVGMRVADDDGWADLFSRVLVEKIEPRLGFGCITILDEYPISE 246

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     DPR  +RFELYAC +EL N   EL +  EQR RFE EM EK ++Y ETYPI
Sbjct: 247 AALARPSAHDPRVAERFELYACGVELANGFGELTNAAEQRRRFEIEMAEKARVYGETYPI 306

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DEDFLA L  MP++SGIA+GFDRLVML TGA+ I++V+W P 
Sbjct: 307 DEDFLAALPLMPEASGIALGFDRLVMLATGASRIDQVLWAPV 348


>gi|13540308|gb|AAK29404.1|AF337055_1 lysyl tRNA synthetase [Methanosarcina barkeri]
          Length = 516

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 153/365 (41%), Gaps = 30/365 (8%)

Query: 4   IPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +    +D    YR+R              + R+ + S +R Y  + +F+E ++  L 
Sbjct: 164 LPEKFHGLKDVETRYRKRYLDLIVNADKREIFVMRSKLISEIRRYLSDREFLEFETPILH 223

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G   + R F+T     + + +   L+ +PE   K+L+  G EK+F     +RN +  
Sbjct: 224 NVYGGA-NARPFTT---FHNCLGQNSSLRIAPELYLKRLVVGGYEKVFEITKNFRNEDID 279

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
             H PEFT +E Y A+  Y  +M     +I     ++             N  +  + I+
Sbjct: 280 TTHNPEFTTIEVYEAYRDYNDMMDLTEGLISELMFKLTGSYEVKIGENTLNLSTPWKRIS 339

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEKIEP 228
           + +A   YA +D+              L   A +  I      +T+ +  + +    +E 
Sbjct: 340 MEDALKEYAGLDVFAHS-------LEELKQIAIENKIEDYEKANTYGEFLALLFEGLVED 392

Query: 229 NLGINCCTILDRYPAPESAL-ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
              +   T +  YP   S L  N         +    +    EL N   EL DPIEQ+ R
Sbjct: 393 K--LINPTFIYDYPVENSPLAKNPTGQKKGLLRDSSYFMNGWELANGYSELNDPIEQKKR 450

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE++ +++K    E   ID DF+  L   MP + G+ +G DRL M++ G ++I EVI  P
Sbjct: 451 FEEQDKKRKLGDLEAQTIDYDFVNALGYGMPPTGGMGLGIDRLTMILVGLDSIKEVILFP 510

Query: 347 FSQSN 351
             +  
Sbjct: 511 QMKRE 515


>gi|225022122|ref|ZP_03711314.1| hypothetical protein CORMATOL_02155 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945055|gb|EEG26264.1| hypothetical protein CORMATOL_02155 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 520

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 143/371 (38%), Gaps = 25/371 (6%)

Query: 1   MHQIPS-----------QP-WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P            +  + +     + R   L R  +  +LR Y     F+E+++  
Sbjct: 156 LRPLPVAFADMSEDMRVRHRYTDLIMREKARENALTRIKVMRALRNYLESQGFLEVETPM 215

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 216 LQTLHGGAA-ARPFVTHS---NALDIDLYLRIAPELYLKRCVVGGIERVFEVNRNFRNEG 271

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF---SEP 165
               H PEF MLE Y+A  +Y+   +   N+I+  A                     +E 
Sbjct: 272 VDSSHSPEFAMLETYQAWGTYDDCAELIKNLIQDVAMEVFGSTTVTLADGSEYDLGGAEW 331

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILI 223
             I +  +             +         L   A   G+ V          +   +  
Sbjct: 332 PTIEMYPSLNEALQRKFPVQPEVTVNSTVAELREIADVVGLDVPAKGGWGHGKLVEELWE 391

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
              E    +     +  +P   S L   + ++P  T++++LY    EL     EL+DP+ 
Sbjct: 392 LLCEDQ--LEGPIFVRNFPVETSPLTRQHRSEPGVTEKWDLYVRGFELATGYSELVDPVI 449

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE + +       E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E 
Sbjct: 450 QRERFEDQARLAAGGDEEAMVLDEDFLAAMEQGMPPTAGAGMGIDRLLMALTGLG-IRET 508

Query: 343 IWTPFSQSNQE 353
           +  P  +  ++
Sbjct: 509 VLFPLVKPERD 519


>gi|325283337|ref|YP_004255878.1| Lysyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315146|gb|ADY26261.1| Lysyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 524

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 149/367 (40%), Gaps = 30/367 (8%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P++    +D   R             RR     R+     +R +     F+E++  
Sbjct: 156 LHPLPTKFGGLQDEELRARRRYLDLIVNPERREAFRTRSQAIRYIRNFLDSQGFMEVEGP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +LQ  PG  T    F T       +     L+ S E   K+LL  G E+++     +RN 
Sbjct: 216 TLQTVPGG-TEATPFQTH---HKALSHDFSLRISLELYLKRLLVGGFERVYEIGRNYRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA--NQKIFSFQNVNCNPFSEP 165
                H PEFTMLE Y A+  Y  +M+    ++    +      +  ++Q    +     
Sbjct: 272 GIDRTHNPEFTMLEAYFAYGDYNDMMELVERMLNGLVKEVTGGSEKITYQGRELDFSLPF 331

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + +    A    A +D        D  D   L   A +    +        +  ++  E 
Sbjct: 332 KRLDFVTALREKAGLDF-------DPLDLGKLRAWADEKHPEMRK-VPDYKLLDKLSGEY 383

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           IEP   +   T L   P   S L   +      ++R +L+    EL     EL D ++QR
Sbjct: 384 IEPE--LQSPTFLVDMPLVISPLVKRHRERAGLSERADLFVGGFELAPIYSELNDALDQR 441

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +   ++   +E +  DEDFL  L   MP ++G+ MG DRL ML+T +++I +V+ 
Sbjct: 442 ARFEAQTARREAGDDEAHQQDEDFLLALEYGMPPTAGMGMGMDRLAMLLTDSDSIRDVLL 501

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 502 FPLLRPE 508


>gi|145296683|ref|YP_001139504.1| lysyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|140846603|dbj|BAF55602.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 526

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 88/370 (23%), Positives = 145/370 (39%), Gaps = 24/370 (6%)

Query: 1   MHQIPS-----------QP-WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P            +  + +     + R   L R  +  +LR Y  +  F+E+++  
Sbjct: 164 LRPLPVAFADLSEDTRVRHRYTDLIMREQARTNALTRIKVMRALRHYLEDQDFLEVETPM 223

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 224 LQTLHGGAA-ARPFKTHS---NALDIDLYLRIAPELYLKRCVVGGIERVFEVNRNFRNEG 279

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF MLE Y A  +YE   K    +++  A+                +   E +
Sbjct: 280 VDSSHSPEFAMLETYEAWGTYETGAKLIKGLVQSVAQEVFGTTLVTLADGTEYDLGGEWK 339

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIE 224
            I +  +             +         L   A+  G+ V  +  W    +   I   
Sbjct: 340 VIEMYPSLNEALARKFPGHPEVTIDSTVEELREIAKVIGLSVPENGGWGHGKLVEEIWEL 399

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E    +     +  +P   S L   +   P  T++++LY    EL     EL+DP+ Q
Sbjct: 400 LCEDQ--LYGPIFVKDFPVETSPLTRQHRTKPGVTEKWDLYVRGFELATGYSELIDPVIQ 457

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RFE + +      +E   +DEDFL  +   MP +SG  MG DRL+M +TG   I E +
Sbjct: 458 RERFEDQARLAADGDDEAMVLDEDFLTAMEQGMPPTSGNGMGIDRLLMALTGLG-IRETV 516

Query: 344 WTPFSQSNQE 353
             P  +  Q+
Sbjct: 517 LFPMVKPEQK 526


>gi|297284499|ref|XP_002802606.1| PREDICTED: lysyl-tRNA synthetase isoform 3 [Macaca mulatta]
          Length = 423

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 82/361 (22%), Positives = 147/361 (40%), Gaps = 56/361 (15%)

Query: 8   PWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPG 54
            +   +++  YR+R              + R+ + + +R +  E  F+EI++  +   PG
Sbjct: 87  HFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKMVTYIRSFLDELGFLEIETPMMNIIPG 146

Query: 55  NETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQ 114
                + F T     + +   LY++ +PE   K L+  G ++++     +RN      H 
Sbjct: 147 GAV-AKPFIT---YHNELDMNLYMRIAPELYHKILVVGGIDRVYEIGRQFRNEGIDLTHN 202

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           PEFT  E+Y A+  Y  +M+    ++                                  
Sbjct: 203 PEFTTCEFYMAYADYHDVMEITEKMVS--------------------------------- 229

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                + L  T     +  R +L        +      T + +  +++ E +E       
Sbjct: 230 ---GMVKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTC--IN 284

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  +P   S LA  + +    T+RFEL+    E+CNA  EL DP+ QR  FE++ + 
Sbjct: 285 PTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKA 344

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           K    +E   IDE+F   L   +P + G  MG DR+ M +T +NNI EV+  P  +   +
Sbjct: 345 KAAGDDEAMFIDENFCTALEYGLPPTGGFGMGLDRVAMFLTDSNNIKEVLLFPAMKPEDK 404

Query: 354 E 354
           +
Sbjct: 405 K 405


>gi|239618393|ref|YP_002941715.1| lysyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239507224|gb|ACR80711.1| lysyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 504

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 91/372 (24%), Positives = 151/372 (40%), Gaps = 33/372 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R  +   +RE+     FIE+++ 
Sbjct: 137 IRTMPEKWHGIKDKEIIYRQRYVEMIASDDAIKRFKIRFELLRRVREFLNARGFIEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  +  R F T +   +     +YL+ + E   K+ L  G EKI+     +RN 
Sbjct: 197 ILHSVTGGAS-ARPFVTHI---NVFDSDMYLRIAEELYLKRYLVGGFEKIYEIGKNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEF M+E Y+A+  Y  +M    ++I    E         +Q    +      
Sbjct: 253 GMSYKHHPEFVMMELYQAYADYNDIMDLTEDLISTVVEQLTGSTKIVYQGKEIDFAKPWL 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I +A+       +D+    D         L    ++    V        +  ++     
Sbjct: 313 RIKMADFIKEKLGVDILEDSD-------ERLIEVLEKHN-SVPEIKERGHLIEKLWDLV- 363

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                I   T +  +P   S LA ++  DPR T+RFEL    +E  NA  EL DPIEQ  
Sbjct: 364 --EDDIVQPTFVVEHPVIISPLAKVHREDPRVTERFELIINGMECANAFSELNDPIEQYR 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +   ++    E   +D DF+  L   MP + G+ +G+DR++M VT +  I +VI  
Sbjct: 422 RFLHQAGLREAGDAEAQMMDRDFIRALEYGMPPTGGLGIGWDRILMFVTDSPTIRDVIPF 481

Query: 346 PFSQS---NQEE 354
           P  +     +EE
Sbjct: 482 PLVRPLSFEEEE 493


>gi|319776760|ref|YP_004136411.1| lysyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318037835|gb|ADV34034.1| Lysyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 488

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 90/363 (24%), Positives = 155/363 (42%), Gaps = 28/363 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D   R              R   + R  I   +R+YF +  ++E ++ 
Sbjct: 136 LKPLPDKFHGLTDTEERYRHRYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L          + F+T     + + +   L+ + E   KKL+  G E+++     +RN 
Sbjct: 196 FLHDYLSGAA-AKPFTTH---HNSLNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+ + E +M     +I+   +   +  F    V  +     + 
Sbjct: 252 GYDTTHNPEFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTNGVEVDLSKPFKR 311

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + +  ++           N  +         A+   I++    T   I + +  E +E
Sbjct: 312 VNMIDEVSKKTG-------KNFRKITLEEAIEVAKAYKIKIEKFFTIGHIINALYEELVE 364

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P   +   T L  +P   S L+     DPRFT+R EL+    E  N   EL DPI+Q  R
Sbjct: 365 PT--LIQPTFLYGHPIEISPLSAKSD-DPRFTERAELFINTKEYANMYTELSDPIDQLER 421

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE +++EK K  +E   ID DF+  L   MP + G  +G DRLVML+T  ++I +V+  P
Sbjct: 422 FESQLEEKNKGNDEASDIDYDFVDALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFP 481

Query: 347 FSQ 349
             +
Sbjct: 482 TLK 484


>gi|2501018|sp|Q49158|SYK_MYCFE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1263074|gb|AAC43988.1| lysyl-tRNA synthetase [Mycoplasma fermentans]
          Length = 488

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 90/363 (24%), Positives = 155/363 (42%), Gaps = 28/363 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D   R              R   + R  I   +R+YF +  ++E ++ 
Sbjct: 136 LKPLPDKFHGLTDTEERYRHRYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L          + F+T     + + +   L+ + E   KKL+  G E+++     +RN 
Sbjct: 196 FLHDYLSGAA-AKPFTTH---HNSLNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+ + E +M     +I+   +   +  F    V  +     + 
Sbjct: 252 GYDTTHNPEFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTNGVEVDLSKPFKR 311

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + +  ++           N  +         A+   I++    T   I + +  E +E
Sbjct: 312 VNMIDEVSKKTG-------KNFRKITLEEAIEVAKAYKIKIEKFFTIGHIINALYEELVE 364

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P   +   T L  +P   S L+     DPRFT+R EL+    E  N   EL DPI+Q  R
Sbjct: 365 PT--LIQPTFLYGHPIEISPLSAKSD-DPRFTERAELFINTKEYANMYTELSDPIDQLER 421

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE +++EK K  +E   ID DF+  L   MP + G  +G DRLVML+T  ++I +V+  P
Sbjct: 422 FESQLEEKNKGNDEASDIDYDFVDALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFP 481

Query: 347 FSQ 349
             +
Sbjct: 482 TLK 484


>gi|134097022|ref|YP_001102683.1| lysyl-tRNA synthetase class II [Saccharopolyspora erythraea NRRL
           2338]
 gi|291006232|ref|ZP_06564205.1| lysyl-tRNA synthetase class II [Saccharopolyspora erythraea NRRL
           2338]
 gi|133909645|emb|CAL99757.1| lysyl-tRNA synthetase class II [Saccharopolyspora erythraea NRRL
           2338]
          Length = 507

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 86/365 (23%), Positives = 149/365 (40%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQP--WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P       + +   R+R             +  R  +Q SLR+ F    FIE+++ 
Sbjct: 155 LRPLPVAHKELGD-ETRVRQRYVDLIVRKQAADTVRTRATVQRSLRDSFQRRGFIEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     +     LYL+ +PE   K+ +  G EK+F     +RN 
Sbjct: 214 MLQTLHGGAA-ARPFVTHS---NAFDMELYLRIAPELYLKRCVVGGIEKVFEINRNFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEF MLE+Y+A+  Y+ + +    +++ AAE                 +E + 
Sbjct: 270 GSDSSHSPEFAMLEFYQAYSDYDGMARLTRQLVQEAAEALTGSQVV----TWFDGTEYDL 325

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                +   Y ++      +   +    +L   A   G++         +   +    + 
Sbjct: 326 SGEWSSVTMYGSLSEALDSEITPETPVEVLRKHADSVGLQTDPAHGHGKLVEELWEHLVG 385

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +  +   T +  +P   + L   + ++P   ++++LY    EL     EL+DP+ +R R
Sbjct: 386 DH--LYAPTFVRDFPLETAPLTRQHRSEPGVAEKWDLYTRGFELATGYSELVDPVVERAR 443

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E++ +       E   +DEDFL  L   MP S G+ MG DRL+M +TG   I E I  P
Sbjct: 444 LEEQARLAASGDEEAMHVDEDFLRALEYGMPPSGGVGMGIDRLLMALTGLG-IRETILFP 502

Query: 347 FSQSN 351
             +  
Sbjct: 503 LVRPE 507


>gi|308189610|ref|YP_003922541.1| lysyl-tRNA synthetase [Mycoplasma fermentans JER]
 gi|307624352|gb|ADN68657.1| lysyl-tRNA synthetase [Mycoplasma fermentans JER]
          Length = 488

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 90/363 (24%), Positives = 155/363 (42%), Gaps = 28/363 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D   R              R   + R  I   +R+YF +  ++E ++ 
Sbjct: 136 LKPLPDKFHGLTDTEERYRHRYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L          + F+T     + + +   L+ + E   KKL+  G E+++     +RN 
Sbjct: 196 FLHDYLSGAA-AKPFTTH---HNSLNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+ + E +M     +I+   +   +  F    V  +     + 
Sbjct: 252 GYDTTHNPEFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTNGVEVDLSKPFKR 311

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + +  ++           N  +         A+   I++    T   I + +  E +E
Sbjct: 312 VNMIDEVSKQTG-------KNFRKITLEEAIEVAKAYKIKIEKFFTIGHIINALYEELVE 364

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P   +   T L  +P   S L+     DPRFT+R EL+    E  N   EL DPI+Q  R
Sbjct: 365 PT--LIQPTFLYGHPIEISPLSAKSD-DPRFTERAELFINTKEYANMYTELSDPIDQLER 421

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE +++EK K  +E   ID DF+  L   MP + G  +G DRLVML+T  ++I +V+  P
Sbjct: 422 FESQLEEKNKGNDEASDIDYDFVDALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFP 481

Query: 347 FSQ 349
             +
Sbjct: 482 TLK 484


>gi|125586971|gb|EAZ27635.1| hypothetical protein OsJ_11579 [Oryza sativa Japonica Group]
          Length = 630

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 78/352 (22%), Positives = 151/352 (42%), Gaps = 28/352 (7%)

Query: 9   WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R                R+ + S +R++     F+E+++  +    G   
Sbjct: 247 LRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMMNMIAGGAA 306

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +   LY++ +PE   K+L+  G ++++     +RN      H PEF
Sbjct: 307 -ARPFVTH---HNELNMRLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEF 362

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A+  Y  L++    ++    +          +        +  +       I 
Sbjct: 363 TTCEFYMAYADYNDLIELTETMLSGMVKELTGGYKIKYHANGVEKPPIEIDFTPPFRKID 422

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E     A +++   L + +      L     +  ++     T + +  +++   +E  
Sbjct: 423 MIEELEAMAKLNIPKDLSSDEAN--KYLIDACAKYDVKCPPPQTTTRLLDKLVGHFLEET 480

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 T +  +P   S LA  + + P  T+RFEL+    E+CNA  EL DP+ QR RFE
Sbjct: 481 CV--NPTFIINHPEIMSPLAKWHRSRPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFE 538

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           +++++++   +E   +DE F   L   +P + G  +G DRL ML+T + NI 
Sbjct: 539 EQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLTMLLTDSQNIK 590


>gi|86359620|ref|YP_471512.1| lysyl-tRNA synthetase protein [Rhizobium etli CFN 42]
 gi|86283722|gb|ABC92785.1| lysyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 353

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 187/342 (54%), Positives = 240/342 (70%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW    H  RRPFL+ RN IQ++LR +F    FIE+D+  LQ SPGNE H+ AF+T+
Sbjct: 7   ASPWWTPSVHADRRPFLIGRNAIQAALRGFFAREDFIEVDTAVLQVSPGNEAHLHAFATQ 66

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            I  D    P YL TSPEF+CKKLLAAGE++I CFAH +RN E+G LH PEFTMLEWYRA
Sbjct: 67  AITTDGQTAPFYLHTSPEFACKKLLAAGEQRISCFAHVYRNRERGPLHHPEFTMLEWYRA 126

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            ESYE LM DC+ I+  AAE     + +++    +PF+ PE I+VA AF R+A IDL  +
Sbjct: 127 GESYESLMMDCVRILALAAETVKTSMLAYRGAKSDPFAGPERISVAGAFERHAGIDLLAS 186

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           + +    DR  L  + ++ G+RVA DD W+D+FSR+L+EK+EP+LG    TILD YP  E
Sbjct: 187 VADDGSTDRDHLAAELRRVGMRVADDDGWADLFSRVLVEKVEPHLGFGRITILDEYPVSE 246

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     DPR  +RFELYAC +EL N   EL +  EQR RFE EM EK +IY ETYP+
Sbjct: 247 AALARPSARDPRVAERFELYACGVELANGFGELTNAGEQRRRFEIEMAEKARIYGETYPV 306

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DEDFL+ L+ MP++SGIA+GFDRLVML TGA+ I++V+W P 
Sbjct: 307 DEDFLSALSLMPEASGIALGFDRLVMLATGASRIDQVLWAPV 348


>gi|288919244|ref|ZP_06413580.1| lysyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288349339|gb|EFC83580.1| lysyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 511

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 86/363 (23%), Positives = 155/363 (42%), Gaps = 27/363 (7%)

Query: 2   HQIPSQPWWNRDFHY-------------RRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     +                  R     R    S +R +  +N F+E+++  
Sbjct: 115 RALPDKWLGLSNVEARLRRRYLDLLVNNDSRERFRIRARTISRIRRFLDDNDFLEVETPM 174

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ +       R F T     + + +  YL+ SPE   K+++    ++++     +RN  
Sbjct: 175 LQEAASGAA-ARPFITH---HNALGEDFYLRISPETFLKRVVVGSLDRVYELGRNFRNEG 230

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEY 167
               H  EFTMLEWY A+  Y   M+    +I    +     +  ++  V  +  +E   
Sbjct: 231 MDPSHLQEFTMLEWYAAYWDYRDNMRFVREMILAVLDDVFGSRTVTYGGVKLDFGAEWPE 290

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +      AR++ IDL    D P       L  +  + G+ V    +++ +   +  + + 
Sbjct: 291 LDYRAEVARHSGIDLTVVRDLPT------LRARIAELGLEVDDAASYAGLVDLLYKKTVR 344

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P+  +     L  +PA    LA    +DP     F++     EL  A  EL+DP+EQR R
Sbjct: 345 PH--LIQPCFLLHHPAELVPLARRSDSDPSQLDMFQVVVNGWELVKAYSELVDPVEQRRR 402

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E++ + +    +ET  ++EDF+  +   MP  SG+ +G DRL+ L+T A  + EV+  P
Sbjct: 403 LEEQAELRAAGDDETMMLEEDFIEAMEYGMPPMSGLGIGIDRLIALLTDAPTLREVVLFP 462

Query: 347 FSQ 349
             +
Sbjct: 463 LMR 465


>gi|296231612|ref|XP_002761206.1| PREDICTED: lysyl-tRNA synthetase isoform 2 [Callithrix jacchus]
          Length = 424

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 84/361 (23%), Positives = 147/361 (40%), Gaps = 55/361 (15%)

Query: 8   PWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPG 54
            +   +++  YR+R              + R+ I + +R +  E  F+EI++  +   PG
Sbjct: 87  HFGLKDKETRYRQRYLDLILNDFVRQKFITRSKIITYIRSFMDELGFLEIETPMMNIIPG 146

Query: 55  NETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQ 114
                + F T     + +   LY++ +PE   K L+  G ++++     +RN      H 
Sbjct: 147 GAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHN 202

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           PEFT  E+Y A+  Y  L                                   + + E  
Sbjct: 203 PEFTTCEFYMAYADYHDL-----------------------------------MEITEKM 227

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                + L  T     +  R +L        +      T + +  +++ E +E       
Sbjct: 228 VSALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTC--IN 285

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  +P   S LA  + +    T+RFEL+    E+CNA  EL DP+ QR  FE++ + 
Sbjct: 286 PTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKA 345

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NNI EV+  P  +   +
Sbjct: 346 KAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPEDK 405

Query: 354 E 354
           +
Sbjct: 406 K 406


>gi|34533120|dbj|BAC86604.1| unnamed protein product [Homo sapiens]
          Length = 423

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 83/361 (22%), Positives = 147/361 (40%), Gaps = 56/361 (15%)

Query: 8   PWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPG 54
            +   +++  YR+R              + R+ I + +R +  E  F+EI++  +   P 
Sbjct: 87  HFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPE 146

Query: 55  NETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQ 114
                + F T     + +   LY++ +PE   K L+  G ++++     +RN      H 
Sbjct: 147 GAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHN 202

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           PEFT  E+Y A+  Y  LM+    ++                                  
Sbjct: 203 PEFTTCEFYMAYADYHDLMEITEKMVS--------------------------------- 229

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                + L  T     +  R +L        +      T + +  +++ E +E       
Sbjct: 230 ---GMVKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTC--IN 284

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  +P   S LA  + +    T+RFEL+    E+CNA  EL DP+ QR  FE++ + 
Sbjct: 285 PTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKA 344

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NNI EV+  P  +   +
Sbjct: 345 KAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPEDK 404

Query: 354 E 354
           +
Sbjct: 405 K 405


>gi|330470480|ref|YP_004408223.1| lysyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328813451|gb|AEB47623.1| lysyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 502

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 150/364 (41%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R             +  R     SLR+   +  FIE+++  
Sbjct: 150 LRPLPVAHKPLSEEARVRQRYVDLIVRPQARQMVRTRAAAVRSLRDLLHDKGFIEVETPM 209

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 210 LQLLHGGAA-ARPFVTHS---NALDTDLYLRIAPELFLKRAVVGGVERVFEINRNFRNEG 265

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+  Y  + +   N+I+ AA  A                E +  
Sbjct: 266 IDSSHSPEFAMLEAYQAYGDYNTMAELTRNLIQQAAIAATGSTVVTHAD----GQEFDLG 321

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
               + + +  +      +   + +R  L   A + G+ V        +   +  E + P
Sbjct: 322 GEWRSVSLFGVLSDALGEEVTVRTERARLVEYADKVGVSVDPKWGPGKLAEELFEELVVP 381

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YP   S L   + ++P   ++++LY    EL  A  EL+DP+ QR R 
Sbjct: 382 --GLQAPTFVRDYPEETSPLTRGHRSEPGVAEKWDLYVFGFELATAYSELVDPVVQRERL 439

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + Q   +  +E   +DEDFL  +   MP + G+ MG DRL+M +TG   I E I  P 
Sbjct: 440 LAQAQLAARGDDEAMRLDEDFLRAMEYGMPPAGGMGMGIDRLLMALTGLG-IRETILFPL 498

Query: 348 SQSN 351
            +  
Sbjct: 499 VRPE 502


>gi|253799320|ref|YP_003032321.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 1435]
 gi|254364489|ref|ZP_04980535.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis str.
            Haarlem]
 gi|289554585|ref|ZP_06443795.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 605]
 gi|289745922|ref|ZP_06505300.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|308231895|ref|ZP_07414164.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu001]
 gi|308370781|ref|ZP_07422693.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu003]
 gi|308372017|ref|ZP_07427062.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu004]
 gi|308376778|ref|ZP_07440004.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu008]
 gi|308377785|ref|ZP_07480396.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu009]
 gi|308378997|ref|ZP_07484594.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu010]
 gi|308380136|ref|ZP_07488819.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu011]
 gi|296439671|sp|C6DS31|LYSX_MYCTK RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|134150003|gb|EBA42048.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis str.
            Haarlem]
 gi|253320823|gb|ACT25426.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 1435]
 gi|289439217|gb|EFD21710.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 605]
 gi|289686450|gb|EFD53938.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|308215742|gb|EFO75141.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu001]
 gi|308330919|gb|EFP19770.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu003]
 gi|308334689|gb|EFP23540.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu004]
 gi|308350027|gb|EFP38878.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu008]
 gi|308354664|gb|EFP43515.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu009]
 gi|308358620|gb|EFP47471.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu010]
 gi|308362546|gb|EFP51397.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu011]
 gi|328459071|gb|AEB04494.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis KZN 4207]
          Length = 1174

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 810  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 869

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 870  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 925

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 926  GVDFSHNPEFTLLEAYQAHADYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 985

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 986  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 1045

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 1046 LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1103

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1104 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1162

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1163 RETLPFPLAKP 1173


>gi|227823482|ref|YP_002827455.1| lysyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227342484|gb|ACP26702.1| lysyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 498

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 159/369 (43%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I S +R +   + F+E+++ 
Sbjct: 142 LLPMPEKWHGLSDIELRYRKRHLDIMTNEESKLRFQQRSRIVSGIRRFMENDGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            L    G  T    F T     + ++  +YL+ +PE   K+ L +G  +K+F     +RN
Sbjct: 202 MLHSVYGGAT-AEPFKTH---HNTLKLDMYLRIAPELYLKRTLVSGLTDKVFEINRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A  +     F++ +   +     
Sbjct: 258 EGVSTRHNPEFTMMECYWAYADYEDIMDLVERMFAELAVSIHGTTEFAYGDKEISFKGPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             + + +A      ID      + +              G  V  D TW +  + +  EK
Sbjct: 318 RRVPMPDAVKEVTGIDFIAIKTDEEARAATRAA------GFEVEKDWTWGECLAFVFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +     +  +P   S  A   P +PR  +RFE Y    EL NA  EL DP EQR
Sbjct: 372 VEPT--LIQPAHVTHFPKDISPFAKEVPGEPRLVERFETYCNTWELGNAFSELNDPEEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  +++++      +   +D++FL  +   MP + G+ +G DRL+ML+T A +I +VI 
Sbjct: 430 ARMVEQLEQAHARGEKAKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDVIL 489

Query: 345 TPFSQSNQE 353
            P  +   +
Sbjct: 490 FPARRHKAD 498


>gi|15841096|ref|NP_336133.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|308401001|ref|ZP_07493334.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu012]
 gi|13881311|gb|AAK45947.1| lysyl-tRNA synthetase, putative [Mycobacterium tuberculosis CDC1551]
 gi|308366166|gb|EFP55017.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu012]
          Length = 1185

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 821  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 880

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 881  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 936

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 937  GVDFSHNPEFTLLEAYQAHADYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 996

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 997  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 1056

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 1057 LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1114

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1115 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1173

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1174 RETLPFPLAKP 1184


>gi|289757744|ref|ZP_06517122.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289713308|gb|EFD77320.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|326903255|gb|EGE50188.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis W-148]
          Length = 1172

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 808  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 867

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 868  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 924  GVDFSHNPEFTLLEAYQAHADYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 983

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 984  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 1043

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 1044 LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1101

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1102 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1160

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1161 RETLPFPLAKP 1171


>gi|289753728|ref|ZP_06513106.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289694315|gb|EFD61744.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
          Length = 1172

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 808  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 867

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 868  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 924  GVDFSHNPEFTLLEAYQAHADYLEWVDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 983

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 984  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 1043

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 1044 LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1101

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1102 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1160

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1161 RETLPFPLAKP 1171


>gi|323357518|ref|YP_004223914.1| lysyl-tRNA synthetase (class II) [Microbacterium testaceum StLB037]
 gi|323273889|dbj|BAJ74034.1| lysyl-tRNA synthetase (class II) [Microbacterium testaceum StLB037]
          Length = 506

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 88/360 (24%), Positives = 146/360 (40%), Gaps = 24/360 (6%)

Query: 3   QIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P+      +               R R  +L R  + +SLR  F E  F+E+++  LQ
Sbjct: 158 PLPNLHSELSEESRVRSRFLDLIVRDRARETVLARAKVNASLRRTFTERDFVEVETPMLQ 217

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G  +  R F T     +     LYL+ +PE   K+ +  G ++++     +RN    
Sbjct: 218 VQHGGAS-ARPFVTHS---NAFDAELYLRIAPELFLKRAVVGGIDRVYEINRNFRNEGAD 273

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H PEF MLE Y+A+  Y  +      +I+ AA            V     +E +    
Sbjct: 274 STHSPEFAMLEAYQAYTDYNGIADLTQTLIQNAAVAVAGST----TVTWADGTEYDLGGD 329

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            +  + Y ++   +      Q     L     +AG+     +T       +    +    
Sbjct: 330 WDRISMYVSLSEASGRTITPQTAVDELRAFGAEAGVEAPAHETHGKWVEELWEHFV--KG 387

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
           G+   T +  +P   S L   + + P   ++++LY    EL     EL+DP+ QR RF +
Sbjct: 388 GLTRPTFVMDFPVDTSPLVREHRSIPGVVEKWDLYVRGFELATGYSELVDPVIQRERFVE 447

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +     +   E   IDE+FL  L   MP + G+ MG DRL+M +TG   I E I  P  +
Sbjct: 448 QATLAARGDVEAMSIDEEFLRALEHGMPPTGGMGMGIDRLLMAITGLG-IRETILFPLVK 506


>gi|149197282|ref|ZP_01874334.1| lysyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149139828|gb|EDM28229.1| lysyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 492

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 154/368 (41%), Gaps = 32/368 (8%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R               +R  I S++REY  ++ ++E+++ 
Sbjct: 138 LRPLPEKFHGLKDVETRYRQRYLDLISNEESRRVFRQRAAIISAMREYLEKDSYMEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + + + ++++ +PE   K LL  G E++F     +RN 
Sbjct: 198 MMHPIPGGAS-ARPFVTHY---NALDQEMFMRIAPELYLKMLLVGGFERVFEINRNFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--P 165
                H PEFT +E Y+A+     +M     IIR  A+     +            E   
Sbjct: 254 GVSKQHNPEFTAIEAYQAYGDCSTMMDLMQGIIRHCAQKVIGTLQVTHPDGKVIDFEKDF 313

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +T  +    +   D     D             A++ G  +  D T  +I   +  +K
Sbjct: 314 RVVTHRDLLIEHTREDWFEITD-------EERANIAREMGCTIMPDWTEEEITEEVYSKK 366

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           IEP   +   T + + P     LA     +P     FEL     EL     EL DPIEQR
Sbjct: 367 IEPT--LIQPTFVTKLPVHMVPLAKRCSENPELVDVFELVCDGKELAPGYSELNDPIEQR 424

Query: 286 HRFEKEMQEKKKIYNET--YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
            R   +  E+ K   E     IDE FL  L   MP + G+ MG DRLVM++TGA  I +V
Sbjct: 425 QRLMAQ-FERAKGTEEEDSGRIDESFLTALEHGMPPAGGMGMGVDRLVMMLTGAPTIRDV 483

Query: 343 IWTPFSQS 350
           I  P  ++
Sbjct: 484 ILFPQLKN 491


>gi|15608778|ref|NP_216156.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|148661436|ref|YP_001282959.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148822848|ref|YP_001287602.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|254231841|ref|ZP_04925168.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis C]
 gi|260204909|ref|ZP_05772400.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289574309|ref|ZP_06454536.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis K85]
 gi|289761791|ref|ZP_06521169.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis GM 1503]
 gi|297731180|ref|ZP_06960298.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298525138|ref|ZP_07012547.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis 94_M4241A]
 gi|308375634|ref|ZP_07444586.2| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu007]
 gi|11387190|sp|P94974|LYSX_MYCTU RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|296439669|sp|A5U2Z7|LYSX_MYCTA RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|296439670|sp|A5WMW1|LYSX_MYCTF RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|1838991|emb|CAB06635.1| Possible lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis
            H37Rv]
 gi|124600900|gb|EAY59910.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis C]
 gi|148505588|gb|ABQ73397.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148721375|gb|ABR06000.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis F11]
 gi|289538740|gb|EFD43318.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis K85]
 gi|289709297|gb|EFD73313.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis GM 1503]
 gi|298494932|gb|EFI30226.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis 94_M4241A]
 gi|308345727|gb|EFP34578.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu007]
          Length = 1172

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 808  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 867

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 868  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 924  GVDFSHNPEFTLLEAYQAHADYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 983

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 984  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 1043

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 1044 LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1101

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1102 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1160

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1161 RETLPFPLAKP 1171


>gi|256374484|ref|YP_003098144.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255918787|gb|ACU34298.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 503

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 147/366 (40%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R             +  R  +  SLRE F    F E+++  
Sbjct: 151 LRPLPVAHKELAEETRIRQRYVDLILREQARDTVRNRAKLVRSLRESFHRRGFTEVETPM 210

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   L+L+ +PE   K+ +  G EK+F     +RN  
Sbjct: 211 LQTLQGGAA-ARPFVTRS---NALDIDLFLRIAPELYLKRCVVGGIEKVFEINRNFRNEG 266

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF+MLE+Y A+ +Y+        +I+ AA                 +   E  
Sbjct: 267 IDSSHSPEFSMLEYYEAYATYDTNAVMTRELIQEAAMAVAGSHVVTLVDGTEYDLGGEWT 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+  + +  A +++       D      L   A + G+          +   +    +
Sbjct: 327 TLTMYGSLSEAAGVEVTPGTSVDD------LRALADKLGLETDPKLGHGKLVEELWEHLV 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             +  ++  T +  +P   S L   + + P   ++++LY    EL     EL+DP+ +R 
Sbjct: 381 GDH--LHAPTFVRDFPVETSPLTRQHRSTPGVAEKWDLYVRGFELATGYSELVDPVVERE 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R E + +       E  P+DEDFL  L   MP S G+ MG DRL+M +TG   I E I  
Sbjct: 439 RLEAQARLGASGDVEAMPVDEDFLRSLEYGMPPSGGVGMGIDRLLMAITGLG-IRETILF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PLVRPE 503


>gi|289443094|ref|ZP_06432838.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis T46]
 gi|289569687|ref|ZP_06449914.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis T17]
 gi|289416013|gb|EFD13253.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis T46]
 gi|289543441|gb|EFD47089.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis T17]
          Length = 1172

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 808  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 867

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 868  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 924  GVDFSHNPEFTLLEAYQAHADYLEWVDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 983

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 984  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 1043

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 1044 LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1101

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1102 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1160

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1161 RETLPFPLAKP 1171


>gi|269794500|ref|YP_003313955.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542]
 gi|269096685|gb|ACZ21121.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542]
          Length = 1147

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 150/366 (40%), Gaps = 29/366 (7%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +   P +     + +   R R             L  R+    S+R   V   F+E+++ 
Sbjct: 791  LTPPPDKHRGLVDPETRLRLRHMDLALDDRAQQLLRARSAAVWSMRSTLVGRDFLEVETP 850

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F+T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 851  ILQRIHGGA-NARPFTTHI---NAYDMDLYLRIAPELYLKQLMVGGAGRVFELGRNFRNE 906

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--CNPFSEP 165
                 H PEFT +E Y A   Y  +     +++  AA   + +  S +            
Sbjct: 907  GVDSTHNPEFTSVEAYEAFGDYLTMRDLTRDLVVAAAVAVHGEPVSRRADGTVVRLDEPW 966

Query: 166  EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
              ITV +A +R   +++   L   D      L        +     +T   + + +    
Sbjct: 967  PSITVHDAVSRAVGVEVTPDLPLAD------LRKVCDSHDVAWDAQETHGALVTELYDRF 1020

Query: 226  IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            +E        T    +P   S L   +  DPR  +R++L A   EL  A  EL+DP+EQR
Sbjct: 1021 VEGQ--TERPTFYMDFPVETSPLTRQHRRDPRLAERWDLVAFGAELGTAYSELVDPVEQR 1078

Query: 286  HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             R  ++         E   +DE FL+ L   MP + G+ +G DR+VM++ GA +I + + 
Sbjct: 1079 ARLTQQSILAAAGDPEAMEVDEGFLSALEFAMPPTGGLGIGVDRVVMMLVGA-SIRDTLT 1137

Query: 345  TPFSQS 350
             PF + 
Sbjct: 1138 FPFIRP 1143


>gi|294678194|ref|YP_003578809.1| lysyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294477014|gb|ADE86402.1| lysyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 349

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 185/344 (53%), Positives = 232/344 (67%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +   PWW+   H  RRP LL R  IQ++LR +  ++ F+E+D ++LQ SPGNE H+  F+
Sbjct: 1   MSQTPWWSPSRHADRRPALLARARIQAALRGWLTDHAFLEVDPVALQVSPGNEAHLHGFA 60

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           T  I  D    P+YL TSPEF+ KKLLAAGE +I  FAH WRN E+G LH PEFTMLEWY
Sbjct: 61  TTAIGNDGAGVPMYLHTSPEFAMKKLLAAGETRIAAFAHVWRNRERGPLHSPEFTMLEWY 120

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           R  E Y  LM+DC + +R AAE A   +  ++   C+PF+ PE ++VAEAF R+A IDL 
Sbjct: 121 RVGEDYSVLMQDCADFLRLAAEAAGSSVLRYKGHACDPFAAPERLSVAEAFLRHAGIDLL 180

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
            T       D   L  QA+ AGI+V  +DTWS + S++L+EK+EP+LG    TILDRYP 
Sbjct: 181 ATCGADGSTDAEGLRAQARAAGIKVGDEDTWSLMLSKVLVEKVEPHLGHGRATILDRYPV 240

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
            E+ALA   P DPR  +RFELYAC +EL N   EL +  EQR RF+ EM EK +IY E Y
Sbjct: 241 AEAALARPAPDDPRVAERFELYACGVELANGFGELTNAAEQRLRFQAEMDEKARIYGERY 300

Query: 304 PIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           PIDEDFLA L +MP +SGIAMGFDRLVML T A  I++VIWTP 
Sbjct: 301 PIDEDFLAALAQMPAASGIAMGFDRLVMLATSAPRIDDVIWTPV 344


>gi|291008865|ref|ZP_06566838.1| lysyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 1099

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 147/366 (40%), Gaps = 21/366 (5%)

Query: 1    MHQIPSQPWWNRDFHYRRRP-------------FLLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     D H R R               L  R+    +LR+  V + F+E+++ 
Sbjct: 739  LHPLPDKHRGLSDPHSRVRARHLDLITRPEARSVLRARSAATHALRDVLVRSDFVEVETP 798

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R FST +   +     LYL+ +PE   K+L   G E++F    A+RN 
Sbjct: 799  VLQPVRGGA-NARPFSTHI---NAYDLRLYLRIAPELYLKRLCVGGVERLFEIGRAFRNE 854

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A   Y  + + C  ++  AA  A                  + 
Sbjct: 855  GVSHKHNPEFTMLEAYQAFGDYTTMRELCRELVVAAAVAATGSTVVTGRDRLGRDVATDL 914

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +   T  +         L       GI    D     +   +    +E
Sbjct: 915  ADDWPVIGVHEAVSAATGEEVTADTPVRRLRRLCDDNGIAHLRDWGRGAVLLELYERLVE 974

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +PA  S LA  +  D R  +R++L A   EL     EL DP+EQR R
Sbjct: 975  AE--TTGPTFYRDFPAEVSPLARPHRHDARLAERWDLVAFGTELGTGYSELTDPVEQRRR 1032

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               + +   +   E   +DEDFL  L   MP + G+ +G DRLVML+TG  +I + +  P
Sbjct: 1033 LADQARLAAEGDAEAMDVDEDFLTALEYAMPPTGGLGLGVDRLVMLLTG-RSIRDTLAFP 1091

Query: 347  FSQSNQ 352
              +  +
Sbjct: 1092 LVKPQR 1097


>gi|134101270|ref|YP_001106931.1| lysyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133913893|emb|CAM04006.1| lysyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 1098

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 147/366 (40%), Gaps = 21/366 (5%)

Query: 1    MHQIPSQPWWNRDFHYRRRP-------------FLLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     D H R R               L  R+    +LR+  V + F+E+++ 
Sbjct: 738  LHPLPDKHRGLSDPHSRVRARHLDLITRPEARSVLRARSAATHALRDVLVRSDFVEVETP 797

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R FST +   +     LYL+ +PE   K+L   G E++F    A+RN 
Sbjct: 798  VLQPVRGGA-NARPFSTHI---NAYDLRLYLRIAPELYLKRLCVGGVERLFEIGRAFRNE 853

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A   Y  + + C  ++  AA  A                  + 
Sbjct: 854  GVSHKHNPEFTMLEAYQAFGDYTTMRELCRELVVAAAVAATGSTVVTGRDRLGRDVATDL 913

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +   T  +         L       GI    D     +   +    +E
Sbjct: 914  ADDWPVIGVHEAVSAATGEEVTADTPVRRLRRLCDDNGIAHLRDWGRGAVLLELYERLVE 973

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +PA  S LA  +  D R  +R++L A   EL     EL DP+EQR R
Sbjct: 974  AE--TTGPTFYRDFPAEVSPLARPHRHDARLAERWDLVAFGTELGTGYSELTDPVEQRRR 1031

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               + +   +   E   +DEDFL  L   MP + G+ +G DRLVML+TG  +I + +  P
Sbjct: 1032 LADQARLAAEGDAEAMDVDEDFLTALEYAMPPTGGLGLGVDRLVMLLTG-RSIRDTLAFP 1090

Query: 347  FSQSNQ 352
              +  +
Sbjct: 1091 LVKPQR 1096


>gi|325188444|emb|CCA22980.1| lysyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 669

 Score =  295 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 78/375 (20%), Positives = 147/375 (39%), Gaps = 29/375 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +  +  D  YR+R                R  I + +R +    +F+E+++ 
Sbjct: 220 LHMLPKAHYGLKLQDTRYRQRYLDLILNDETRKVFEIRAKIINFIRHFLDTRRFLEVETP 279

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   LY++ +PE   K+L+  G ++++     +RN 
Sbjct: 280 MMNMIAGGAT-AKPFVT---YHNDLHMNLYMRVAPELYLKQLVIGGLDRVYEVGRQFRNE 335

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                H PEFT  E+Y A+  Y  LM     +     +  +       + +        +
Sbjct: 336 GIDLTHNPEFTSCEFYMAYADYNDLMTMTEELFSSMVKEISGSYQLTIHRDPSEDPISID 395

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  I +  A      + +         P   +L    ++  +  +   + + +  +
Sbjct: 396 FTPPFRRIKMVTAVEEATGMAIPINEPEVCLP---ILDSLVKKYELDCSPPRSIARLLDK 452

Query: 221 ILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           ++   IE           +   P   S LA  +      T+RFEL+    E+CNA  EL 
Sbjct: 453 LVGHFIEDNKANWTQPFFIMDQPVYNSPLAKYHRETAGLTERFELFLAGAEICNAYTELN 512

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           +P  QR RF ++ ++     +E  P DE F   +   +P + G   G DRL M ++   N
Sbjct: 513 NPKVQRERFIEQTRQAADGDDEAQPHDEAFCTAMEYGLPPTGGWGCGIDRLAMFLSNKFN 572

Query: 339 INEVIWTPFSQSNQE 353
           I EV+  P  + + +
Sbjct: 573 IKEVLLFPAMKPDDQ 587


>gi|83310382|ref|YP_420646.1| hypothetical protein amb1283 [Magnetospirillum magneticum AMB-1]
 gi|82945223|dbj|BAE50087.1| Truncated possibly inactive lysyl-tRNA synthetase [Magnetospirillum
           magneticum AMB-1]
          Length = 348

 Score =  295 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 150/343 (43%), Positives = 211/343 (61%), Gaps = 2/343 (0%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           + WW  +   RR+  L  R  + ++ R +F    F E+++  LQ SPG E H++AF+T  
Sbjct: 4   KEWWRPEVFARRKAALDLRGRVVNATRAFFAARDFAEVETPCLQVSPGLEPHLKAFATAF 63

Query: 67  IIQ-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
                   +PLYL TSPEF+ KKLL AG  +++  A  +RN E+   H PEFTMLEWYRA
Sbjct: 64  ADPFGGPDRPLYLHTSPEFAMKKLLVAGVPRLYQLAKVFRNAERSATHHPEFTMLEWYRA 123

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             S E LM D   ++R  A+ A   +   +   C+PF+    ++VAEAFA YA ID+  +
Sbjct: 124 GASIEDLMADTEALVRDCAKAAGVGLLRRRGTTCDPFAPWRRLSVAEAFAEYAGIDVLAS 183

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
             +P  PDR +L  +A + G+ V+  D+W DIF +++++++EP+LG +   IL  YP   
Sbjct: 184 APDPWSPDRSVLATEAARIGLSVSPSDSWEDIFFKVMLDRVEPHLGFDRPVILHSYPVSM 243

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +AL+   PADPR  +RFE YA  +ELCNA  EL DP EQR RF  +M  K+ +Y E YP+
Sbjct: 244 AALSRPSPADPRVAERFEAYALGVELCNAFGELTDPAEQRRRFTADMDLKQALYGERYPL 303

Query: 306 DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DEDFL  L   MP S+GIA+GFDRLVML+ G   I++V+W P 
Sbjct: 304 DEDFLTALDAGMPDSAGIALGFDRLVMLLAGTETIDDVLWAPV 346


>gi|162449905|ref|YP_001612272.1| lysine--tRNA ligase [Sorangium cellulosum 'So ce 56']
 gi|161160487|emb|CAN91792.1| Lysine--tRNA ligase [Sorangium cellulosum 'So ce 56']
          Length = 573

 Score =  295 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 96/392 (24%), Positives = 163/392 (41%), Gaps = 43/392 (10%)

Query: 2   HQIPSQ-PWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
             +P++  + + +  YR R                R  I ++LR +     F+E+++ ++
Sbjct: 186 RPLPTKTSFKDVESRYRMRYVDLVANPHVAGVFRARTAIVAALRGFLDARGFLEVETPTM 245

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G     + F T     + +   L+++ +PE   K+L+  G E+++  A  +RN   
Sbjct: 246 HTLVGGAA-AKPFKTH---HNALDLELFMRIAPELFLKRLVVGGFERVYEIARCYRNEGL 301

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA----AEVANQKIFSFQNVNCNPFSEP 165
              H PEFTMLE+Y+A+ +YE LM     ++R      AE    +  ++           
Sbjct: 302 STRHNPEFTMLEYYQAYATYETLMDATEAMLRHVDARLAERLPAEHAAWAAQRTYSLERF 361

Query: 166 EYITVAEAFARYANID----LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW------- 214
           E + +AE  AR  +              D          A+ +G  +   +         
Sbjct: 362 ERVPMAEGIARALSKSGLPADVPQRVAADDAPIKEWAKAAKASGREIDWTNFRAGAKKCE 421

Query: 215 --SDIFSRILIEKIEPNLGINC---------CTILDRYPAPESALANIYPADPRFTKRFE 263
              ++        +EP L  +             +  YP   S LA    +DP    RFE
Sbjct: 422 SPGELVFCAYEYVVEPFLTRDYRTEAGDKSVPVFIIDYPFEVSPLARKKDSDPSLVDRFE 481

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           L+    ELCNA  EL DP +Q  RF  ++++K +   ET   D D++  L   +P ++G 
Sbjct: 482 LFIDGRELCNAFSELNDPEDQDARFRAQVEKKSRGEEETMDYDADYVRALEHGLPPTAGF 541

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
            MG DRL ML+TGA +I +VI  P  +   + 
Sbjct: 542 GMGVDRLTMLLTGATSIRDVILFPLLRPETDA 573


>gi|284990815|ref|YP_003409369.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064060|gb|ADB74998.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 1132

 Score =  295 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 145/368 (39%), Gaps = 29/368 (7%)

Query: 1   MHQIPSQPWW-------------NRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H  P +                + + + R R     R+    ++R +  +  F E++  
Sbjct: 144 LHAPPPEHAGLSDVETRYRQRYVDLEVNERTRQVFRIRHAAVRAIRRHLEDRDFTEVEGP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  +  R F T     + +   LYL+ + E   K+L+  G E++F     +RN 
Sbjct: 204 VLQTIQGGAS-ARPFVTHS---NALDLDLYLRIALELHLKRLIVGGLERVFEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF---SE 164
                H PEFT+LE Y+A      +M+    ++  AA  A     +      +     + 
Sbjct: 260 GVDTRHNPEFTLLEAYQAFGDITDMMELTEGLVTAAARAALGADLTVHYAGHSIDLAATP 319

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
                 A+  A      +   +   D            + GI          +   +  E
Sbjct: 320 WPRKRFADMIAEATGATMHPAMPIDD------ARAVLDRLGIPYEASWGAGRLMKEVYDE 373

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           K+     +        YP   S LA ++  DP + +RFEL     ELCNA  E  DP+EQ
Sbjct: 374 KV--QHSVVGPVFCVDYPREVSPLARVHRDDPAYVERFELIVAGFELCNAYSEQNDPVEQ 431

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
              FE E + K     E   +D D++  L   MP + G+ +G DRLVML+ G ++I EVI
Sbjct: 432 LAAFEAEARAKSHGDPEAGDVDTDYVRALECGMPCTGGLGIGIDRLVMLLAGVDSIREVI 491

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 492 LFPTLRPE 499


>gi|289178212|gb|ADC85458.1| Lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 605

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 91/363 (25%), Positives = 149/363 (41%), Gaps = 24/363 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       D   R+           R  +  R+   +SLR  F E+ F+E+++  
Sbjct: 251 LQPLPTLHKELNEDTRTRKPYIGMIADEKIRNMVRNRSRAVASLRRTFDEHGFLEVETPM 310

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G EK+F     +RN  
Sbjct: 311 LQTIHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIEKVFEINRDFRNEG 366

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y A+ +Y+ + K    +I+  A                  +E ++ 
Sbjct: 367 VDATHAPEFTMVEAYEAYGNYDTIAKLVKELIQKTAIDVFGSTKV----TLLDGTEYDFG 422

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +  + Y ++          +     L   A + G+     +    +   +     E 
Sbjct: 423 GEWKTMSMYDSLSEALGQQITPETSVEELGAIADRLGVERDEVENHGKLVEHLWEHFYED 482

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L   + + P   ++++LY    EL     EL DPI QR RF
Sbjct: 483 K--LYEPTFVRDFPVETSPLVKAHRSKPGVVEKWDLYVRGFELATGYSELNDPIVQRERF 540

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I  P 
Sbjct: 541 VAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETITFPL 599

Query: 348 SQS 350
            + 
Sbjct: 600 VKP 602


>gi|7007427|dbj|BAA90843.1| LysS [Bacillus halodurans]
          Length = 310

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 88/316 (27%), Positives = 152/316 (48%), Gaps = 14/316 (4%)

Query: 38  ENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKI 97
           +  ++E+++ ++   PG  +  R F T     + +   LY++ + E   K+L+  G EK+
Sbjct: 1   DRGYLEVETPTMHSIPGGAS-ARPFVTH---HNALDMTLYMRIAIELHLKRLIVGGMEKV 56

Query: 98  FCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQN 156
           +     +RN      H PEFTM+E Y A+  Y  +M+    +I   A +V      ++  
Sbjct: 57  YEIGRVFRNEGVSTRHNPEFTMIELYEAYADYNDIMELTELLIAHIAKDVLGTTTITYGE 116

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              N   +   + + EA      +D    + +            A++  + V    T+  
Sbjct: 117 HEVNLEPKWRRVHMVEAIKEETGVDFWNEMSD------EEARALAKEHNVPVKETMTYGH 170

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           + +      +E    +   T +  +P   S LA   P DPRFT RFEL+    E  NA  
Sbjct: 171 VVNEFFEHFVEEK--LIQPTFVYGHPVAISPLAKKNPDDPRFTDRFELFIVGREHANAFS 228

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL DPI+QRHRFE+++ E+++  +E + +DEDF+  L   MP + G+ +G DRLVML+T 
Sbjct: 229 ELNDPIDQRHRFEQQLVEREQGDDEAHMMDEDFVESLEYGMPPTGGLGIGIDRLVMLLTN 288

Query: 336 ANNINEVIWTPFSQSN 351
           + +I +V+  P  +  
Sbjct: 289 SPSIRDVLLFPQMRHK 304


>gi|170738727|ref|YP_001767382.1| lysine--tRNA ligase [Methylobacterium sp. 4-46]
 gi|168193001|gb|ACA14948.1| Lysine--tRNA ligase [Methylobacterium sp. 4-46]
          Length = 350

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 188/348 (54%), Positives = 241/348 (69%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
              + PWW    H  RRP LL RN I+++LR +F E  F+E+++ +LQ SPGNETH+ AF
Sbjct: 1   MTSASPWWAPHVHADRRPRLLARNRIKAALRAWFAERGFVEVETAALQVSPGNETHLSAF 60

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           +T  I  D   +PLYL TSPEF+CKKLLAAGE ++  FA  +RN E+G LH PEFT++EW
Sbjct: 61  ATRAIGPDGRGQPLYLHTSPEFACKKLLAAGERRLVVFAPVYRNRERGPLHHPEFTLVEW 120

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YRA +  E LM+DC  ++  AAE A  +   +++   +PF++PE +TVAEAFAR+A IDL
Sbjct: 121 YRAGDGCEALMRDCAALLARAAEAAGAERLRYRDREADPFAQPERLTVAEAFARHAGIDL 180

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             T+      DR  L      +GIR A DDTW+D+FSR+L+E+IEP+LG+   TIL  YP
Sbjct: 181 LATVAPDGATDREGLRAAVTASGIRTAPDDTWADLFSRVLVERIEPHLGLGRATILCDYP 240

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
            PE+ALA   PADPR  +RFELYAC +EL N   EL D  EQR RF  EM EK++IY E 
Sbjct: 241 IPEAALARPSPADPRVAERFELYACGVELANGFGELTDADEQRRRFAAEMDEKERIYGER 300

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           YP+DEDFLA L  MP++SGIA+GFDRLVML TGA  I EVIWTP ++ 
Sbjct: 301 YPVDEDFLAALARMPEASGIALGFDRLVMLATGARRIEEVIWTPVAEP 348


>gi|307128736|ref|YP_003880766.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483198|gb|ADM90068.1| lysyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 493

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 91/350 (26%), Positives = 154/350 (44%), Gaps = 26/350 (7%)

Query: 13  DFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
           +  YR R              +KR  I   +R Y  +  ++E+++  LQ  PG     R 
Sbjct: 157 EQRYRMRYLDLIVNDKTKYIFIKRTKIIQYIRNYLNKKGYLEVETPILQSIPGGAI-ARP 215

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F T     + +  PLYL+ S E   KKL+  G E ++ F+  +RN     +H  EFT+LE
Sbjct: 216 FITH---HNALNIPLYLRISNELFLKKLIVGGLEYVYEFSRNFRNEGIDKIHNTEFTILE 272

Query: 122 WYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
            Y +++ Y  +M     ++     ++ N+K     +   N     + IT+ ++       
Sbjct: 273 LYVSYKDYFWMMIFIEKMLEYLCVKIHNKKFIKIGDNIINFNIPFKKITILDSIKENTGY 332

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL          D   +    ++  +++ +      +   I  EK E        T +  
Sbjct: 333 DLYGM-------DEKNIIKICKKINVKIDNSMGKGKMIDLIFSEKCEKKY--INPTFIMD 383

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P   S L  I+ +    T+RFEL     E+ N+  EL DPI+Q  RF ++++   K  N
Sbjct: 384 HPIEMSPLTKIHRSKKGLTERFELIINGNEIANSYSELNDPIDQLKRFREQIKLYNKGDN 443

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           E   ID +F+  L   MP  +GI +G DRL+ML+T    I +V++    +
Sbjct: 444 EAMLIDWNFIRSLEFGMPPCAGIGIGIDRLIMLLTNKKCIQDVLFFTQMK 493


>gi|86359247|ref|YP_471139.1| lysyl-tRNA synthetase protein [Rhizobium etli CFN 42]
 gi|123724720|sp|Q2K424|SYK_RHIEC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|86283349|gb|ABC92412.1| lysyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 498

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 160/369 (43%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I S +R +   + F+E+++ 
Sbjct: 142 LLPMPEKWHGLSDIELRYRKRHLDILTNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            LQ   G  T    F T     + ++  +YL+ +PE   K+ L +G  +K+F     +RN
Sbjct: 202 MLQSIYGGAT-AEPFKTH---HNTLKLDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A  +     F F +   +     
Sbjct: 258 EGVSTRHNPEFTMMECYWAYADYEDMMDLVERLFETLALSIHGTTEFDFGDKRLSFKGPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + + + +A      ID      + +                 V  D TW +  + I  EK
Sbjct: 318 KRVPMPDAVKEVTGIDFLAIKTDEEARAAAKAAGF------AVEKDWTWGECLAFIFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   + +  +P   S  A   P +PR  +RFE Y    EL NA  EL DP EQR
Sbjct: 372 VEAT--LIQPSHVTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDPEEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  +++++      +   +DE+FL  +   MP + G+ +G DRL+ML+T A +I +VI 
Sbjct: 430 RRMVEQLEQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDVIL 489

Query: 345 TPFSQSNQE 353
            P  +S  +
Sbjct: 490 FPARRSKAD 498


>gi|219682909|ref|YP_002469292.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|219620559|gb|ACL28716.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
          Length = 554

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 91/363 (25%), Positives = 149/363 (41%), Gaps = 24/363 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       D   R+           R  +  R+   +SLR  F E+ F+E+++  
Sbjct: 200 LQPLPTLHKELNEDTRTRKPYIGMIADEKIRNMVRNRSRAVASLRRTFDEHGFLEVETPM 259

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G EK+F     +RN  
Sbjct: 260 LQTIHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIEKVFEINRDFRNEG 315

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y A+ +Y+ + K    +I+  A                  +E ++ 
Sbjct: 316 VDATHAPEFTMVEAYEAYGNYDTIAKLVKELIQKTAIDVFGSTKV----TLLDGTEYDFG 371

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +  + Y ++          +     L   A + G+     +    +   +     E 
Sbjct: 372 GEWKTMSMYDSLSEALGQQITPETSVEELGAIADRLGVERDEVENHGKLVEHLWEHFYED 431

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L   + + P   ++++LY    EL     EL DPI QR RF
Sbjct: 432 K--LYEPTFVRDFPVETSPLVKAHRSKPGVVEKWDLYVRGFELATGYSELNDPIVQRERF 489

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I  P 
Sbjct: 490 VAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETITFPL 548

Query: 348 SQS 350
            + 
Sbjct: 549 VKP 551


>gi|119963343|ref|YP_945986.1| lysyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119950202|gb|ABM09113.1| lysyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 509

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 87/364 (23%), Positives = 143/364 (39%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R             + +R  I  S+R+    + ++E+++  
Sbjct: 157 LRPLPVLHAELNEETRVRQRYVDLMVRDEAREMVYRRAAITRSVRDTLDRHGYVEVETPI 216

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  T  R F T +   +   + + L+ + E   K+ +  G ++++     +RN  
Sbjct: 217 LQLVHGGAT-ARPFETHM---NAFDQKMTLRIATELFLKRAVVGGIDRVYDMGRVFRNEG 272

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT LE Y A      + +    II   A+V   +         N   E  +I
Sbjct: 273 VDSTHSPEFTTLECYEAWADQFVMAERMKEIILNVADVVGTRTIQTDAGEINLDGEWAWI 332

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  I     ++         L   A +  ++V        +   +  E +EP
Sbjct: 333 SV------YPGISEAVGVEITPDTTVDELLAIAAKHEVKVDPKWDAEKMVVELFGEIVEP 386

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP     LA  +  D R  + ++L    +E   A  EL+DP+ QR R 
Sbjct: 387 T--LLNPTFVYDYPPSAQPLARPHREDGRLIEAWDLIIGGMERGTAFSELIDPVIQRERL 444

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++ +       E   +DEDFL  L    P   GI +G DRLVML TGA  I E I  P 
Sbjct: 445 TEQSRRSAAGDEEAMQLDEDFLRALEYGAPPMGGIGLGIDRLVMLFTGAG-IRETILFPL 503

Query: 348 SQSN 351
            +  
Sbjct: 504 LKPE 507


>gi|215445821|ref|ZP_03432573.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|294996590|ref|ZP_06802281.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 210]
          Length = 1111

 Score =  294 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 747  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 806

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 807  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 862

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 863  GVDFSHNPEFTLLEAYQAHADYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 922

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 923  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 982

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 983  LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1040

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1041 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1099

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1100 RETLPFPLAKP 1110


>gi|240168025|ref|ZP_04746684.1| lysyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 1103

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 148/364 (40%), Gaps = 22/364 (6%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  L  R+ +  S+RE      FIE+++ 
Sbjct: 747  LRPLPNKWKGLTDPEARVRTRYVDLAVNAESRDLLTARSTVLRSVRETLFAKGFIEVETP 806

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G     R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 807  ILQQVHGGAA-ARPFVTHI---NSYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 862

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y   +  C  +I+ AA+ AN    + +    +     + 
Sbjct: 863  GVDFSHNPEFTLLEAYQAHADYLVWLDSCRELIQNAAQAANGAPIAMRP-TSDGLQPVDI 921

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              V      Y  +            +   L   +  A I          +   +    +E
Sbjct: 922  SGVWPVKTVYDAVSEALGEHIHVDTNLATLRRLSDAAHIPYRAQWDAGAVVLELYEHLVE 981

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   + +     +R++L A  IEL  A  EL DP+EQR R
Sbjct: 982  SR--TERPTFYIDFPTSVSPLTRPHRSKLGVAERWDLVAWGIELGTAYSELTDPVEQRRR 1039

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              ++         E   +DEDFL  L   MP + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1040 LHEQSLLAAGGDPEAMQLDEDFLQALEYAMPPTGGLGMGVDRVVMLITG-RSIRETLPFP 1098

Query: 347  FSQS 350
             ++ 
Sbjct: 1099 LAKP 1102


>gi|215430532|ref|ZP_03428451.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
          Length = 1111

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 747  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 806

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 807  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 862

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 863  GVDFSHNPEFTLLEAYQAHADYLEWVDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 922

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 923  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 982

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 983  LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1040

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1041 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1099

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1100 RETLPFPLAKP 1110


>gi|289447250|ref|ZP_06436994.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis CPHL_A]
 gi|289420208|gb|EFD17409.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis CPHL_A]
          Length = 1172

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 808  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 867

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 868  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 924  GVDFSHNPEFTLLEAYQAHADYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 983

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 984  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCYAAGVPYRTQWDAGAVVLE 1043

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 1044 LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1101

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1102 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1160

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1161 RETLPFPLAKP 1171


>gi|219557559|ref|ZP_03536635.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|260200703|ref|ZP_05768194.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T46]
          Length = 1111

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 747  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 806

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 807  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 862

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 863  GVDFSHNPEFTLLEAYQAHADYLEWVDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 922

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 923  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 982

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 983  LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1040

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1041 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1099

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1100 RETLPFPLAKP 1110


>gi|215404058|ref|ZP_03416239.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215411286|ref|ZP_03420094.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|218753346|ref|ZP_03532142.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|254550646|ref|ZP_05141093.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
            INH-RIF-EM']
 gi|297634193|ref|ZP_06951973.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|313658512|ref|ZP_07815392.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
          Length = 1111

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 747  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 806

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 807  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 862

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 863  GVDFSHNPEFTLLEAYQAHADYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 922

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 923  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 982

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 983  LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1040

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1041 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1099

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1100 RETLPFPLAKP 1110


>gi|297621580|ref|YP_003709717.1| lysyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376881|gb|ADI38711.1| lysyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 525

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/376 (24%), Positives = 159/376 (42%), Gaps = 35/376 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +  +     +++  YR+R               KR+ I S +R +F    FIE+++ 
Sbjct: 160 LLPLADKHSGLADKETRYRKRWLDLITHEEVRSTFRKRSKILSMIRRFFENQDFIEVETP 219

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T+L   + + + +Y++ S E   KKL+  G +K+F     +RN 
Sbjct: 220 VLQSIYGGA-EARPFVTKL---NALDQEMYMRISLEIPLKKLIVGGMDKVFEIGRVFRNE 275

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCN 160
                H PEFT+LE Y AH  Y  +M+   N++   A   +           S +    +
Sbjct: 276 GIDRTHNPEFTLLEAYAAHWDYNDMMRTMENLVEKLALELHGTTLLKVTDPESGKEAEID 335

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +  + +T+ E+   YANID+    D         L L+      +         + + 
Sbjct: 336 VKAPWKRMTMKESINTYANIDVDALSDEELYK----LVLECSHLEAKKIKTFPRGLMINA 391

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYP----ADPRFTKRFELYACNIELCNACD 276
           +   K+EP+  +     +  +P   + L   +      +    +RFE +    E  NA  
Sbjct: 392 LFEHKVEPH--LIQPHHITDFPIETTPLCKPHRDPAEREKGIVERFESFIMGGEFSNAYT 449

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC-LTEMPQSSGIAMGFDRLVMLVTG 335
           EL DP+ Q     ++   K     E  P D +F+      MP + GI +G DRLVML+T 
Sbjct: 450 ELNDPVIQYQLLAEQAARKATGDEEANPFDHEFVEAICQGMPPTGGIGIGIDRLVMLLTH 509

Query: 336 ANNINEVIWTPFSQSN 351
           + +I +V++ P+ +  
Sbjct: 510 STSIRDVLFFPWMKPQ 525


>gi|226355353|ref|YP_002785093.1| lysyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226317343|gb|ACO45339.1| putative lysine--tRNA ligase (lysyl-tRNA synthetase) [Deinococcus
           deserti VCD115]
          Length = 514

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 149/366 (40%), Gaps = 29/366 (7%)

Query: 1   MHQIPSQPWWNRDFHYR-------------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +PS+    +D   R             RR     R+     +R +    +F+E++  
Sbjct: 152 LHPMPSKFHGLQDEELRARRRYLDLMINPERREAFRTRSRAIRYIRNFLDSREFMEVEGP 211

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +LQ   G  T  + F+T     + +     L+ S E   K+LL  G E+++     +RN 
Sbjct: 212 TLQVVAGG-TEAKPFTTH---HNALSHDFSLRISLELYLKRLLVGGFERVYEIGRNYRNE 267

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y  +M+    ++         +   S+Q    +      
Sbjct: 268 GIDRTHNPEFTMLEAYFAYGDYNDMMQLVEEMLHGLVTEVKGEPKLSYQGQTVDFSLPFR 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +    A    A +D        +  D   L     +    +        +  ++  E +
Sbjct: 328 RLDFVTALKEAAGLDF-------EPTDLARLRTWTDEKHPEMRK-VPDYKLLDKLFGEYV 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +   P   S L   + +     +R +L+    EL     EL D ++QR 
Sbjct: 380 EPT--LINPTFVTDVPLAISPLVKAHRSREALAERADLFVAGFELAPIYSELNDALDQRA 437

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + Q +    +E +  DEDFL  L   MP ++G+ MG DRL ML+T +++I +V+  
Sbjct: 438 RFEAQTQRRDAGDDEAHEQDEDFLLALEYGMPPAAGMGMGMDRLAMLLTDSDSIRDVLLF 497

Query: 346 PFSQSN 351
           P  +  
Sbjct: 498 PLLRPE 503


>gi|308373201|ref|ZP_07431378.2| LOW QUALITY PROTEIN: lysyl-tRNA synthetase 2 lysX [Mycobacterium
            tuberculosis SUMu005]
 gi|308374363|ref|ZP_07435759.2| LOW QUALITY PROTEIN: lysyl-tRNA synthetase 2 lysX [Mycobacterium
            tuberculosis SUMu006]
 gi|308338531|gb|EFP27382.1| LOW QUALITY PROTEIN: lysyl-tRNA synthetase 2 lysX [Mycobacterium
            tuberculosis SUMu005]
 gi|308342201|gb|EFP31052.1| LOW QUALITY PROTEIN: lysyl-tRNA synthetase 2 lysX [Mycobacterium
            tuberculosis SUMu006]
          Length = 1102

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 738  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 797

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 798  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 853

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 854  GVDFSHNPEFTLLEAYQAHADYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 913

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 914  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 973

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 974  LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1031

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1032 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1090

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1091 RETLPFPLAKP 1101


>gi|281358632|ref|ZP_06245110.1| lysyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281314862|gb|EFA98897.1| lysyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 505

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 152/366 (41%), Gaps = 30/366 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R             L  R+ I + +R +     F+E+++ 
Sbjct: 150 LRPLPEKYHGLVDIEQRYRQRYLDLITNEESFRVLKLRSRILAEIRNFMNGRGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  +    F+T     + +   +Y++ +PE   K+LL  G EK++     +RN 
Sbjct: 210 MLQALAGGAS-ANPFTTYY---EALSSTMYMRIAPELYLKRLLVGGFEKVYELGRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPF-SEP 165
                H PEFTM+E Y+A+     +M+   ++I   A            N          
Sbjct: 266 GMDRRHNPEFTMMEIYQAYGDCRTMMELIESLITTVAMKTVGTLKIDHGNGKVIDLTPPW 325

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
              T  E        D         Q        + Q+  + V    +  D+ + +  + 
Sbjct: 326 RRATYNELCEEKGGADWF-------QLTPEERIKRGQELKLDVHTGMSDLDVTNELYEKL 378

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T + R P     LA   P DP     FEL    +E+  A  EL +PI QR
Sbjct: 379 VEPT--LIQPTFVTRIPVELLPLAKGCPDDPTHVDVFELGINGVEVAPAYSELNNPIIQR 436

Query: 286 HRFEKE-MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
            R  ++  + K++       +DEDFL  L   MP + G+ +G DRLVM++TGA +I +VI
Sbjct: 437 QRLMEQFEKNKQEGDVLAEKVDEDFLVALEHGMPPAGGMGVGIDRLVMILTGAESIRDVI 496

Query: 344 WTPFSQ 349
             P  +
Sbjct: 497 LFPQMK 502


>gi|145596786|ref|YP_001161083.1| lysyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145306123|gb|ABP56705.1| lysyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 502

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 147/364 (40%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R             +  R     SLRE   E  F+E+++  
Sbjct: 150 LRPLPVAHKPLSEEARVRQRYVDLIVRPQARQMVRTRATAVRSLRESLHERGFLEVETPM 209

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  T  R F T     + +   LYL+ +PE   K+ L  G + +F     +RN  
Sbjct: 210 LQLLHGGAT-ARPFVTHS---NALSTDLYLRIAPELFLKRALVGGVDHVFEINRNFRNEG 265

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+  Y+ + +   ++I+ AA                   E +  
Sbjct: 266 VDSSHSPEFAMLEAYQAYGDYDTIGELTRHLIQQAALAVGGSTVVTHAD----GREFDLG 321

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
               +   +  +      +   + +R  L   A +  + V        +   +  E + P
Sbjct: 322 GEWRSVTLFGALSEALGEEVTVRTERTRLVEYADKVDLAVDPKWGPGKLAEELFEELVVP 381

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YP   S L   +  +P  T++++LY    EL     EL+DP+ QR R 
Sbjct: 382 --GLLAPTFVRDYPEETSPLVRAHRTEPGLTEKWDLYVLGFELGTGYSELVDPVVQRERL 439

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + +   +  +E   +DEDFL  L   MP S G+ MG DRL+M +TG   I E I  P 
Sbjct: 440 VAQARLAARGDDEAMRLDEDFLRALEYGMPPSGGMGMGIDRLLMALTGLG-IRETILFPL 498

Query: 348 SQSN 351
            +  
Sbjct: 499 VRPE 502


>gi|183601998|ref|ZP_02963367.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241190485|ref|YP_002967879.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195891|ref|YP_002969446.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183218883|gb|EDT89525.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240248877|gb|ACS45817.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250445|gb|ACS47384.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|295793472|gb|ADG33007.1| lysyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
          Length = 538

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/363 (25%), Positives = 149/363 (41%), Gaps = 24/363 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       D   R+           R  +  R+   +SLR  F E+ F+E+++  
Sbjct: 184 LQPLPTLHKELNEDTRTRKPYIGMIADEKIRNMVRNRSRAVASLRRTFDEHGFLEVETPM 243

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G EK+F     +RN  
Sbjct: 244 LQTIHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIEKVFEINRDFRNEG 299

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y A+ +Y+ + K    +I+  A                  +E ++ 
Sbjct: 300 VDATHAPEFTMVEAYEAYGNYDTIAKLVKELIQKTAIDVFGSTKV----TLLDGTEYDFG 355

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +  + Y ++          +     L   A + G+     +    +   +     E 
Sbjct: 356 GEWKTMSMYDSLSEALGQQITPETSVEELGAIADRLGVERDEVENHGKLVEHLWEHFYED 415

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  +P   S L   + + P   ++++LY    EL     EL DPI QR RF
Sbjct: 416 K--LYEPTFVRDFPVETSPLVKAHRSKPGVVEKWDLYVRGFELATGYSELNDPIVQRERF 473

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I  P 
Sbjct: 474 VAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETITFPL 532

Query: 348 SQS 350
            + 
Sbjct: 533 VKP 535


>gi|256397477|ref|YP_003119041.1| lysyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363703|gb|ACU77200.1| lysyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 506

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 90/364 (24%), Positives = 145/364 (39%), Gaps = 21/364 (5%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R+R             L  R+ +  SLR       + E+++ 
Sbjct: 149 LRPLPDKHKGLNDPEARVRQRYVDLIVNPEARRMLFTRSDLVRSLRSSLGRRGYTEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + R F T +   +     LYL+ +PE   K+LL  G EK+F     +RN 
Sbjct: 209 MLQPIHGGA-NARPFETHI---NAYDMKLYLRIAPELYLKRLLVGGVEKVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE Y  +  Y+ + K     I+  AE       + +        E + 
Sbjct: 265 GADSTHSPEFTMLEAYEVYGDYDVMQKLTQQTIQEGAEAIFGSQVARRLNAEGEVEEFDI 324

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
               ++      +      +     +   L      AGI  A   T   +   +    +E
Sbjct: 325 SGDWKSVTVNDAVSAALGEEISADTEIGALKKLCDSAGIPYAPGWTRGQVVLEMYEHLVE 384

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T    +P   S L   +  DPR  +R++L     E+     EL+DP++QR R
Sbjct: 385 DKTVL--PTFYRDFPKDVSPLTRAHRTDPRLAERWDLVGWGAEIGTGYSELIDPVDQRER 442

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F ++         +   +DEDFL  L   MP + GI +G DR++M +TG   I E I  P
Sbjct: 443 FTEQSLLAAGGDPDAMQLDEDFLRALEYAMPPAGGIGVGIDRILMALTGRL-IRETILFP 501

Query: 347 FSQS 350
           F + 
Sbjct: 502 FVKP 505


>gi|218682608|ref|ZP_03530209.1| Lysine--tRNA ligase [Rhizobium etli CIAT 894]
          Length = 353

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 191/342 (55%), Positives = 241/342 (70%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW    H  RRPFL+ RN IQ++LR +F    FIE+D+ +LQ SPGNE H+ AF+TE
Sbjct: 7   ASPWWTPSVHADRRPFLVGRNAIQAALRGFFAREDFIEVDTAALQISPGNEAHLHAFATE 66

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            +  D  R P YL TSPEF+CKKLLAAGEE+I CFAH +RN E+G LH PEFTMLEWYRA
Sbjct: 67  ALTTDGQRAPFYLHTSPEFACKKLLAAGEERISCFAHVYRNRERGPLHHPEFTMLEWYRA 126

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            ESYE LM DC+ I+  AAE+       ++    +PF+ PE I+VAEAF R+A IDL  +
Sbjct: 127 GESYESLMMDCVRILALAAEMVKTPRLVYRGGESDPFAGPERISVAEAFERHAGIDLLAS 186

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L  + ++ G+RVA DD W+D+FSR+L+EKIEP+LG    TILD YP  E
Sbjct: 187 VAADGSTDRDHLAAELRRVGMRVAADDGWADLFSRVLVEKIEPHLGFGRITILDEYPVSE 246

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     DPR  +RFELYAC +EL N   EL +  EQR RFE EM EK ++Y ETYP+
Sbjct: 247 AALARPSARDPRVAERFELYACGVELANGFGELTNAGEQRRRFEIEMAEKARVYGETYPL 306

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DEDFLA L+ MP++SGIA+GFDRLVML TGA+ I++V+W P 
Sbjct: 307 DEDFLAALSLMPEASGIALGFDRLVMLATGASRIDQVLWAPV 348


>gi|227489351|ref|ZP_03919667.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227090724|gb|EEI26036.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 514

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 84/366 (22%), Positives = 134/366 (36%), Gaps = 22/366 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        D   R R   L            R  +  +LR +     F+E+++  
Sbjct: 156 LRPLPVAHKEMSEDQRIRHRYTDLIMRDEARKNALTRIKVMRALRNFLESEGFLEVETPM 215

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 216 LQTLHGGAA-ARPFVTHS---NAMDMDLYLRIAPELFLKRCVVGGIERVFEVNRNFRNEG 271

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF MLE Y+A   Y         +I+  A                 +   E +
Sbjct: 272 VDSSHSPEFAMLETYQAWGDYNTGADLIKRLIQSVATEVFGSTTVTLVDGTEYDFGGEWK 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + +  +             +         L   A   G+              I     
Sbjct: 332 TLEMYPSLNEALARKFPGQPEVTIDSSVEELEAIADHIGLEKGKGWGHGKFVEEIWEFLC 391

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  +P   S L   + + P  T++++LY    EL     EL+DP+ QR 
Sbjct: 392 EDQ--LYGPVFVRDFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELVDPVIQRE 449

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +      +E   +DEDFL  + + MP +SG  MG DRL+M +TG   I E +  
Sbjct: 450 RFEDQARLAAGGDDEAMELDEDFLFAMEQAMPPTSGNGMGIDRLLMALTGLG-IRETVLF 508

Query: 346 PFSQSN 351
           P  +  
Sbjct: 509 PIVKPE 514


>gi|225166205|ref|ZP_03727917.1| lysyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224799553|gb|EEG18070.1| lysyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 519

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 87/367 (23%), Positives = 143/367 (38%), Gaps = 35/367 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R             L  R+ I + +R +  +  F+E+++ 
Sbjct: 156 LRPLPEKWHGLSDPEQVYRQRYLDLIVNPESRARLQLRSKIITHIRRFLEDRNFLEVETP 215

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +     L+ S E   K++L  G +++F     +RN 
Sbjct: 216 VLQSVAGGAA-ARPFETH---HNALGVDFVLRISLELYLKRMLVGGFDRVFEIGRNFRNE 271

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN---VNCNPFSE 164
                H PEFTMLE Y+A+  Y  +M    ++ +                     N   +
Sbjct: 272 GVSRRHNPEFTMLEVYQAYSDYRGMMTLVRDLFQSLCRDVLGTTEIKHAASGETINFAGD 331

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
              +   +      N     +    ++         AQ+ G+         +I + I  +
Sbjct: 332 WREVPYKDLIKDATNDPDWFSRSKTEK------IAAAQKLGLYADPKWEDYEITNEIFSK 385

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           KIEP   +   T +   P     LA +   DP     FEL    +E+  A  E  DP  Q
Sbjct: 386 KIEPT--LIQPTFVTHLPKELCPLAKLNLEDPSVIDVFELTIGGMEIAPAYSEQNDPDVQ 443

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R  FE +         +   ID DFL  L   MP + G+ +G DRL +L+TGA +I +VI
Sbjct: 444 RQMFEAQA------GEDIQKIDTDFLLALEHGMPPAGGMGIGIDRLCILLTGAESIRDVI 497

Query: 344 WTPFSQS 350
             P  + 
Sbjct: 498 LFPQLRP 504


>gi|323719901|gb|EGB29014.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis CDC1551A]
          Length = 1083

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 719  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 778

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 779  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 834

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 835  GVDFSHNPEFTLLEAYQAHADYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 894

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 895  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 954

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 955  LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1012

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1013 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1071

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1072 RETLPFPLAKP 1082


>gi|227540939|ref|ZP_03970988.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227183199|gb|EEI64171.1| lysyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 514

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 84/366 (22%), Positives = 134/366 (36%), Gaps = 22/366 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        D   R R   L            R  +  +LR +     F+E+++  
Sbjct: 156 LRPLPVAHKEMSEDQRIRHRYTDLIMREEARKNALTRIKVMRALRNFLESEGFLEVETPM 215

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 216 LQTLHGGAA-ARPFVTHS---NAMDMDLYLRIAPELFLKRCVVGGIERVFEVNRNFRNEG 271

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF MLE Y+A   Y         +I+  A                 +   E +
Sbjct: 272 VDSSHSPEFAMLETYQAWGDYNTGADLIKRLIQSVATEVFGSTTVTLVDGTEYDFGGEWK 331

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + +  +             +         L   A   G+              I     
Sbjct: 332 TLEMYPSLNEALARKFPGQPEVTIDSSVEELEAIADHIGLEKGKGWGHGKFVEEIWEFLC 391

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  +P   S L   + + P  T++++LY    EL     EL+DP+ QR 
Sbjct: 392 EDQ--LYGPVFVRDFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELVDPVIQRE 449

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +      +E   +DEDFL  + + MP +SG  MG DRL+M +TG   I E +  
Sbjct: 450 RFEDQARLAAGGDDEAMELDEDFLFAMEQAMPPTSGNGMGIDRLLMALTGLG-IRETVLF 508

Query: 346 PFSQSN 351
           P  +  
Sbjct: 509 PIVKPE 514


>gi|159040202|ref|YP_001539455.1| lysyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157919037|gb|ABW00465.1| lysyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 502

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 148/364 (40%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R             +  R     SLRE   E  F+E+++  
Sbjct: 150 LRPLPVAHKPLSEEARVRQRYVDLIVRPQARQMVRTRATAVRSLRESLHERGFLEVETPM 209

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  T  R F T     + +   LYL+ +PE   K+ L  G + IF     +RN  
Sbjct: 210 LQLLHGGAT-ARPFVTHS---NALSSDLYLRIAPELFLKRALVGGIDHIFEINRNFRNEG 265

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+  Y+ +     ++++ AA                   E +  
Sbjct: 266 VDSSHSPEFAMLEAYQAYGDYDTIGDLTRHLVQQAALAVGGSTVVTHAD----GREFDLG 321

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
               +   +  +      +   + +R  L   A + G+ V        +   +  E + P
Sbjct: 322 GEWASVTLFGALSEALGEETTVRTERSRLVEYADKVGLAVDPKWGPGKLAEELFEELVVP 381

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YP   S L   + A+P  T++++LY    EL     EL+DP+ QR R 
Sbjct: 382 --GLLAPTFVRDYPEETSPLVRAHRAEPGLTEKWDLYVLGFELGTGYSELVDPVIQRERL 439

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + Q   +  +E   +DEDFL  +   MP S G+ MG DRL+M +TG   I E I  P 
Sbjct: 440 VAQAQLAARGNDEAMRLDEDFLRAMEYGMPPSGGMGMGIDRLLMALTGLG-IRETILFPL 498

Query: 348 SQSN 351
            +  
Sbjct: 499 VRPE 502


>gi|319949732|ref|ZP_08023760.1| lysyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319436597|gb|EFV91689.1| lysyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 543

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 145/376 (38%), Gaps = 37/376 (9%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        D   R+R   L            R  +  +LR+   +  F+E+++  
Sbjct: 175 LRPLPVAHKELSEDTRVRQRYTDLIMRDTARRNALTRIKVVRALRDALEKRGFLEVETPM 234

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 235 LQTLHGGAA-ARPFVTHS---NALGLDLYLRIAPELYLKRCVVGGIERVFEINRNFRNEG 290

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+  Y+        +I+  A            V     +E E  
Sbjct: 291 VDSSHSPEFAMLETYQAYGDYDTSATMIREVIQEVATAVFGST----TVTLADGTEYELG 346

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDR-----------HLLYLQAQQAGIRVAHDDTW--S 215
                   Y +++      +P+                 L   A + G+ V     W   
Sbjct: 347 GQWREMRMYPSLNEALQRKHPELATAGAETVTVDTSVAELTELAGKVGLEVPSGKGWLHG 406

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            +   +          +     +  +P   S L   +  D   T++++LY    EL    
Sbjct: 407 KLVEELWEHLCADQ--LEGPVFVRDFPVETSPLTRDHRTDRGVTEKWDLYVRGFELATGY 464

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL+DP+ QR RFE + +      +E   +DEDFLA +   MP ++G+ MG DRL+M +T
Sbjct: 465 SELVDPVIQRQRFEDQARLAAAGDDEAMVLDEDFLAAMEQGMPPTTGLGMGIDRLLMALT 524

Query: 335 GANNINEVIWTPFSQS 350
           G   I E I  P  + 
Sbjct: 525 GLG-IRETILFPMVKP 539


>gi|255068595|ref|ZP_05320450.1| lysine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255047153|gb|EET42617.1| lysine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 306

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 86/316 (27%), Positives = 141/316 (44%), Gaps = 13/316 (4%)

Query: 38  ENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKI 97
              ++E+++  +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++
Sbjct: 2   NEHYLEVETPMMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERV 57

Query: 98  FCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQN 156
           F    ++RN      H PEFTM+E+Y A   YE++M+   +IIR A+   N     S+  
Sbjct: 58  FEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASHTVNGTAKISYNG 117

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              +  S  E +T+ EA  +Y          +    D   L  +  + G  +        
Sbjct: 118 KEVDLESPFERLTILEAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 172

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +   +     E    +   T +  YP   S LA         T+RFEL+    EL N   
Sbjct: 173 LQLALFEGCAEGK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYS 230

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL DP +Q  RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T 
Sbjct: 231 ELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTD 290

Query: 336 ANNINEVIWTPFSQSN 351
           +  I +VI  P  +  
Sbjct: 291 SQTIRDVILFPQMRPE 306


>gi|219127934|ref|XP_002184180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404411|gb|EEC44358.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 537

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 90/382 (23%), Positives = 156/382 (40%), Gaps = 37/382 (9%)

Query: 1   MHQIPSQPWWNR--------DFHYRRRP-----------FLLKRNMIQSSLREYFVENQF 41
           +H +P  P  +         +  YR+R                R  + + +R+Y  E  F
Sbjct: 143 LHMLPF-PKGDSNLGGITNMETRYRQRYLDLIVNADVRKTFEIRAKVINKIRKYLDERHF 201

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           +E+++  +   PG     R F T     + +   L+L+ +PE   K L+  G ++++   
Sbjct: 202 LEVETPMMNMIPGGAV-ARPFVT---YHNDLSMDLFLRIAPELYLKMLVIGGLDRVYEIG 257

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SF 154
             +RN      H PEFT LE+Y A+  Y  LM  C  ++    +                
Sbjct: 258 RQFRNEGIDLTHNPEFTTLEFYMAYVDYNDLMDMCEELVSSMVKEITGDYKIKYSPKPGM 317

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
           + V  +     + I++ E         L    D         L     +  +  +   T 
Sbjct: 318 EEVEIDFTPPFKRISMMEGIEAAIGEKLPAMDDPEVD---QKLLAVLTKHNLECSPPHTT 374

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
           S +   ++ E +E +  I   T +  +P   S LA  + + P  T+RFE++A   EL NA
Sbjct: 375 SRLLDTMVGEFLEDH--IIHPTFITEHPQIMSPLAKHHRSKPFLTERFEMFAAGRELVNA 432

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLV 333
             EL DP+ Q   F ++ +      NE   +D+ F+  L   +P + G  +G DRL M +
Sbjct: 433 YTELNDPVTQYKLFLEQAKAGSAGDNEAMVMDDSFVTALEHGLPPTGGFGLGVDRLTMFL 492

Query: 334 TGANNINEVIWTPFSQSNQEEI 355
           +  NNI EV+  P  +   E++
Sbjct: 493 SNKNNIKEVLLFPAMKPTDEQL 514


>gi|300790538|ref|YP_003770829.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32]
 gi|299800052|gb|ADJ50427.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32]
          Length = 503

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 88/364 (24%), Positives = 145/364 (39%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+      +               R R  +  R  +  SLRE F    F E+++  
Sbjct: 151 LRPLPNAHKELAEETRIRQRYVDLIMRPRARDVVRTRAGVVRSLRESFHRRGFTEVETPM 210

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  T  R F T     +     L+L+ +PE   K+ +  G EK+F     +RN  
Sbjct: 211 LQTLHGGAT-ARPFVTHS---NAFDMELFLRIAPELYLKRCVVGGIEKVFEINRNFRNEG 266

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE+Y A+ +Y+        +I+ AA+     +           SE +  
Sbjct: 267 SDSTHSPEFAMLEYYEAYATYDTNAVMTRQLIQEAAQTVLDTLVV----TLPDGSEYDLS 322

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                   Y ++      +   +     L   AQ  G+ V        +   +    +  
Sbjct: 323 GEWTTLGMYESLSDSLGEEVTPETPAAKLLGFAQARGLEVDPKLGHGKLVEELWEHLVGD 382

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +  ++  T +  +P   S L   + + P   ++++LY    EL     EL+DP+ +R R 
Sbjct: 383 H--LHAPTFVRDFPVETSPLTRQHRSRPGVAEKWDLYVRGFELATGYSELVDPVVERERL 440

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++     +  +E   +DEDFL  L   MP S G+ MG DRL+M +TG   I E I  P 
Sbjct: 441 TEQSLLAAQGDSEAMRLDEDFLRALEYGMPPSGGVGMGIDRLLMALTGLG-IRETILFPQ 499

Query: 348 SQSN 351
            +  
Sbjct: 500 VRPE 503


>gi|330723807|gb|AEC46177.1| Lysyl-tRNA synthetase 1 [Mycoplasma hyorhinis MCLD]
          Length = 492

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 155/368 (42%), Gaps = 29/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R  I S +R++     ++E+ + 
Sbjct: 138 LKPLPDKFHGINDVDEKYRKRYLDLISNPETKQVFFTRTKIISLIRQFLDNLNYMEVTTP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ      +  R F+T     + +    YL+ + E   KKLL  G ++++     +RN 
Sbjct: 198 ILQSLLTGAS-ARPFTTFY---NSLHANFYLRIATELPLKKLLVGGLDRVYEIGKIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN--QKIFSFQNVNCNPFSEP 165
                H PEFT +E+Y A+ + E +M+    I +   +  N   K   F     +     
Sbjct: 254 GVDTTHNPEFTSIEFYEAYANLETMMERTEAIFKFLVDKLNIKNKKIVFGEYEIDFNLPF 313

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
               + +  +    I+L T            L   AQ   I++        I + +  E 
Sbjct: 314 NKFDLVDKTSEILGINLKTQS-------FEQLKAIAQAHNIKIEKFYQSGHIINALFEEF 366

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  +P   S LA     DPRFT+R EL+    E  N  +EL DP +Q 
Sbjct: 367 VEPK--LIQPTFVYGHPIEISPLAKKDEKDPRFTQRAELFIAKKEFANMFNELNDPEDQL 424

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +++EK     E   ID DF+  L   MP + G  +G DRLVML+T   +I EVI 
Sbjct: 425 QRFENQIKEKDLGNEEANEIDYDFVDSLKYGMPPAGGCGIGIDRLVMLLTSKTSIREVIL 484

Query: 345 TPFSQSNQ 352
            P  ++ +
Sbjct: 485 FPQLKAKK 492


>gi|145352203|ref|XP_001420444.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580678|gb|ABO98737.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 607

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 89/382 (23%), Positives = 159/382 (41%), Gaps = 39/382 (10%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R                R+ I S++R    ++ F+E+++ 
Sbjct: 228 LLPLPDKWHGLQDVEKRYRQRYVDLIVSPEVRNTFKARSNIISTIRRMLDDDGFLEMETP 287

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F+T     + +   L L+ + E   K+L+  G E+++     +RN 
Sbjct: 288 VLHTQAGGA-DAKPFNT---FHNALGMQLTLRIATELHLKRLVVGGFERVYELGRVFRNE 343

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFS-EP 165
                H PEFT +E Y+A+     +++    +I RCA +        + +V  +      
Sbjct: 344 GLSTRHNPEFTSIEVYQAYADVTDMLELTEEMICRCAMKACGTLTIPYGDVTIDLSQRPW 403

Query: 166 EYITVAEAFARYANIDLGTTLDNPD------QPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
               + +       +D+    D+ +       P       +A +    V    +   + +
Sbjct: 404 RRAPMNDLVKEATGVDVMAFGDDLEGAKAAAIPALKAHSKKAGEGIKGVKLAASVGHVLN 463

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            +     E    +   T +  +P   S LA  + + P  T+RFEL+    EL N+  EL 
Sbjct: 464 EMFEAACES--DLIQPTFVLDHPLEISPLAKPHRSKPGVTERFELFVVGRELANSFSELT 521

Query: 280 DPIEQRHRFEKEMQEKKK-----------IYNETYPIDEDFLACLT-EMPQSSGIAMGFD 327
           DPI+QR R E +M    K                  +DEDF+A L   MP ++G+ +G D
Sbjct: 522 DPIDQRKRLEAQMVTHAKTSAAQREAAAANEAYDVEMDEDFVAALEYGMPPTAGMGLGVD 581

Query: 328 RLVMLVTGANNINEVIWTPFSQ 349
           RLVML+T + +I +VI  P  +
Sbjct: 582 RLVMLLTNSPSIRDVIAFPLLK 603


>gi|190893501|ref|YP_001980043.1| lysyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|238692556|sp|B3Q0S4|SYK_RHIE6 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|190698780|gb|ACE92865.1| lysyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 498

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 161/369 (43%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I S +R +   + F+E+++ 
Sbjct: 142 LLPMPEKWHGLSDIELRYRKRHLDIMTNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            LQ   G  T    F T     + ++  +YL+ +PE   K+ L +G  +K+F     +RN
Sbjct: 202 MLQSIYGGAT-AEPFKTH---HNTLKLDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A  +     F F +   +     
Sbjct: 258 EGVSTRHNPEFTMMECYWAYADYEDMMDLVERLFEALALSIHGTTEFDFGDKRLSFKGPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + + + +A      ID  T   + +                 V  D TW +  + I  EK
Sbjct: 318 KRVPMPDAVKEATGIDFLTIKTDEEARAAAKAAGF------AVEKDWTWGECLAFIFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   + +  +P   S  A   P +PR  +RFE Y    EL NA  EL DP EQR
Sbjct: 372 VEAT--LIQPSHVTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDPEEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  +++++      +   +DE+FL  +   MP + G+ +G DRL+ML+T A +I +VI 
Sbjct: 430 RRMVEQLEQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDVIL 489

Query: 345 TPFSQSNQE 353
            P  ++  +
Sbjct: 490 FPARRNKAD 498


>gi|158318146|ref|YP_001510654.1| lysyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158113551|gb|ABW15748.1| lysyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 496

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 85/363 (23%), Positives = 152/363 (41%), Gaps = 27/363 (7%)

Query: 2   HQIPSQPWWNRDFHY-------------RRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     +                  R     R    S +R +  +N F+E+++  
Sbjct: 115 RALPDKWQGLSNVEARLRRRYLDLLVNNDSRERFRTRARTISRIRRFLDDNDFLEVETPM 174

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ +       R F T     + + +  YL+ SPE   K+++    ++++     +RN  
Sbjct: 175 LQEAASGAA-ARPFITH---HNALGEDFYLRISPETFLKRVVVGSLDRVYELGRNFRNEG 230

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEY 167
               H  EFTMLEWY A+  Y   M+    +I    +     +  ++  V  +  ++   
Sbjct: 231 MDPSHLQEFTMLEWYAAYWDYRDNMRFVREMILAVLDDVFGSRTVTYDGVKLDFGADWPE 290

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +      AR   IDL    D P       L  +  + G+ V    +++ +   +  + + 
Sbjct: 291 LDYRAEVARRTGIDLTVVRDLPT------LRARISELGLEVDDAASYAGLVDLLYKKAVR 344

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P+  +     L  +PA    LA     DP     F++     EL  A  EL+DP+EQR R
Sbjct: 345 PH--LVQPCFLVHHPAELVPLARRSDEDPSRLDMFQVVVNGWELVKAYSELVDPVEQRRR 402

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E++ + +    +ET  ++EDF+  +   MP  SG+ +G DRL+ L+T A  + EV+  P
Sbjct: 403 LEEQAELRAAGDDETMMLEEDFIEAMEYGMPPMSGLGIGIDRLIALLTDAPTLREVVLFP 462

Query: 347 FSQ 349
             +
Sbjct: 463 LMR 465


>gi|260186588|ref|ZP_05764062.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
          Length = 1111

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 747  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 806

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 807  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 862

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 863  GVDFSHNPEFTLLEAYQAHADYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 922

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 923  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCYAAGVPYRTQWDAGAVVLE 982

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 983  LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1040

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1041 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1099

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1100 RETLPFPLAKP 1110


>gi|311740160|ref|ZP_07713992.1| lysine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304715|gb|EFQ80786.1| lysine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 525

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 88/371 (23%), Positives = 141/371 (38%), Gaps = 25/371 (6%)

Query: 1   MHQIPSQPW---WNRDFHYRRRPFLLK---------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +     R    +++         R  +  +LR Y     F+EI++  
Sbjct: 162 LRPLPVSFADMAEDTRVRQRYNDLIIREEARKNAMIRVKVMRALRNYLESQDFVEIETPM 221

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 222 LQTLHGGAA-ARPFITHS---NALDIDLYLRIAPELYLKRAVVGGIDRVFEINRNFRNEG 277

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI---FSFQNVNCNPFSEP 165
               H PEF MLE Y A   Y+   +     I+  A           +          E 
Sbjct: 278 VDRSHSPEFAMLETYAAWGDYDDCARMTRESIQAVARDVFGSTTVTLADGTEFDFGGEEW 337

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILI 223
             I +  +             +     D   L   A   G+ V  D  W    +   I  
Sbjct: 338 PEIEMYPSLNEALQRKFPGQPEVTIDTDVETLKGIADVIGLDVPKDGGWGHGKLVEEIWE 397

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
              E    +     +  +P   S L   + + P  T++++LY    EL     EL+DP+ 
Sbjct: 398 VLCEDQ--LEGPIFVKNFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELVDPVI 455

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE + +      +E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E 
Sbjct: 456 QRERFEDQARLAAGGDDEAMVLDEDFLAAMEQGMPPTAGTGMGMDRLLMALTGLG-IRET 514

Query: 343 IWTPFSQSNQE 353
           +  P  +  Q+
Sbjct: 515 VLFPLVKPEQK 525


>gi|302530771|ref|ZP_07283113.1| lysyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302439666|gb|EFL11482.1| lysyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 504

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 143/366 (39%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P       +               R R  +  R+ +  SLRE F    F E+++  
Sbjct: 152 LRPLPVAFKELAEETRIRQRYVDLIMRPRARDVVRTRSGVMRSLRESFHRRGFTEVETPM 211

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     +     L+L+ +PE   K+ +  G EK+F     +RN  
Sbjct: 212 LQTLHGGAA-ARPFVTHS---NAFDLELFLRIAPELYLKRCVVGGIEKVFEINRNFRNEG 267

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF MLE+Y A+ +Y+        +I+ AAE                +   E  
Sbjct: 268 SDSSHSPEFAMLEYYEAYATYDTNAVMTRELIQEAAENVLGTQVVTLADGTEYDLSGEWT 327

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + E+ +     ++              L+  A    I V        +   +    +
Sbjct: 328 TLGMYESLSEALGEEVTPDTP------AEALHKIAAAREIEVDPKLAHGKLVEELWEHLV 381

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
               G++  T +  +P   S L   + + P   ++++LY    EL     EL+DP+ +R 
Sbjct: 382 GD--GLHAPTFVRDFPLETSPLTRQHRSRPGVAEKWDLYVRGFELATGYSELVDPVVERQ 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R  ++ +      +E   +DEDFL  L   MP S G+ MG DRL+M +TG   I E I  
Sbjct: 440 RLTEQARLAAAGDSEAMRLDEDFLRALEYGMPPSGGVGMGIDRLLMALTGLG-IRETILF 498

Query: 346 PFSQSN 351
           P  +  
Sbjct: 499 PLVRPE 504


>gi|68535359|ref|YP_250064.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|68262958|emb|CAI36446.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411]
          Length = 551

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 150/376 (39%), Gaps = 30/376 (7%)

Query: 1   MHQIPSQPWW-NRDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R   L            R  +  +LR+Y     F+EI++  
Sbjct: 182 LRPLPVAFAEMNEETRVRQRYNDLIVREEARKNAMTRVKVIRALRDYMEGEGFVEIETPM 241

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 242 LQTLHGGAA-ARPFVTHS---NALDIDLYLRIAPELFLKRAVVGGIDRVFEINRNFRNEG 297

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA--NQKIFSFQNVNCNPFSEPE 166
               H PEF MLE Y A   Y+   +     I+   +       +     V     +E +
Sbjct: 298 VDKSHSPEFAMLETYAAWGDYDDCARTTRESIQYIVDQLTKGTDLEGTGKVRLADGTEFD 357

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDR------HLLYLQAQQAGIRVAH--DDTWSDIF 218
           +    +    Y +++       P QP+         L   A+  G+ V          + 
Sbjct: 358 FGGEWKEIEMYPSLNEALARKYPGQPEVTIDSTVEELKEIAKVIGLDVPAKGGWGHGKLV 417

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I     E    +     +  +P   S L   + + P  T++++LY    EL     EL
Sbjct: 418 EEIWEVLCEDQ--LEGPIFVRNFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSEL 475

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
           +DP+ QR RFE + +      +E   +DEDFLA +   MP ++G  MG DRL+M +TG  
Sbjct: 476 IDPVIQRERFEDQARLAANGDDEAMRLDEDFLAAMEQGMPPTAGTGMGIDRLLMALTGLG 535

Query: 338 NINEVIWTPFSQSNQE 353
            I E +  P  +  ++
Sbjct: 536 -IRETVLFPIVKPERD 550


>gi|38234551|ref|NP_940318.1| lysyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|38200814|emb|CAE50518.1| Putative lysyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 520

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 85/369 (23%), Positives = 142/369 (38%), Gaps = 24/369 (6%)

Query: 1   MHQIP-----------SQP-WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P            +  + +     + R   + R  +  +LR Y     F+E+++  
Sbjct: 159 LRPLPVAFADMSEDMRIRHRYTDLIMREQARTNAMTRIKVMRALRHYLEGQDFMEVETPM 218

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 219 LQTLHGGAA-ARPFVTHS---NALDIDLYLRIAPELYLKRCVVGGIERVFEVNRNFRNEG 274

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF MLE Y+A  +Y+   K    +I+  A                 +   E +
Sbjct: 275 VDSSHSPEFAMLETYQAWGTYDDGAKMIQELIQSVAMEVFGSTTVTLVDGTEYDLGGEWK 334

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIE 224
            I +  +             +         L   A   G+ V          +   I   
Sbjct: 335 TIEMYPSLNEALTRKFPGQPEVTIDSTVDELKAIAAVIGLDVPAKGGWGHGKLVEEIWEH 394

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E    +     +  +P   S L   + + P  T++++LY    EL     EL+DP+ Q
Sbjct: 395 LCEDQ--LYGPIFVRDFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELVDPVIQ 452

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RFE + +      +E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E +
Sbjct: 453 RERFEDQARLAAGGDDEAMVLDEDFLAAMEQGMPPTAGCGMGIDRLLMALTGLG-IRETV 511

Query: 344 WTPFSQSNQ 352
             P  +  +
Sbjct: 512 LFPIVKPER 520


>gi|260578976|ref|ZP_05846879.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258602950|gb|EEW16224.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 1050

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 90/349 (25%), Positives = 148/349 (42%), Gaps = 20/349 (5%)

Query: 1    MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
            +H +  +     + + R    L  R+++ +++R    +  F+E+++  LQ   G   + R
Sbjct: 713  LHPLTRRGAGIGEVNAR----LRARSVVNAAIRRTLGDLGFMEVETPILQRVHGGA-NAR 767

Query: 61   AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
             F T     +   + LYL+ +PE   K+LL  G EK++     +RN      H PEFT +
Sbjct: 768  PFRTRS---NAANQDLYLRIAPELYLKRLLTQGAEKVYELGRVFRNEGVDATHNPEFTTV 824

Query: 121  EWYRAHESYEQLMKDCMNIIRCAAEVANQKIF--SFQNVNCNPFSEPEYITVAEAFARYA 178
            E Y AH  YE +      II+ AA   + +      +    +        TV EA +   
Sbjct: 825  EAYEAHSDYESMRWVAQRIIQAAATAYHGEPLVLDPEGNLVSIAENFPVKTVYEAISEKV 884

Query: 179  NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
               +        + +   L       GI         ++   +    +E        T  
Sbjct: 885  GQSITP------ETNFETLLELCAVHGIATQPGWDSGEVVQEMYEALVECT--TTMPTFY 936

Query: 239  DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
              +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R E +  +    
Sbjct: 937  TDFPTSVSPLTRQHRSQPGVAERWDLVAWGVELGTAYSELTDPLEQRDRLEAQSLKAAGG 996

Query: 299  YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              E   +DE FL  L   MP + G+ +G DRL+ML+TG  +I EV+  P
Sbjct: 997  DPEAMEVDEAFLRALEDGMPPTGGLGLGVDRLIMLLTG-RSIREVLSFP 1044


>gi|255325852|ref|ZP_05366944.1| lysine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297064|gb|EET76389.1| lysine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 525

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 88/371 (23%), Positives = 141/371 (38%), Gaps = 25/371 (6%)

Query: 1   MHQIPSQPW---WNRDFHYRRRPFLLK---------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +     R    +++         R  +  +LR Y     F+EI++  
Sbjct: 162 LRPLPVSFADMAEDTRVRQRYNDLIIREEARKNAMIRVKVMRALRNYLESQDFVEIETPM 221

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 222 LQTLHGGAA-ARPFITHS---NALDIDLYLRIAPELYLKRAVVGGIDRVFEINRNFRNEG 277

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI---FSFQNVNCNPFSEP 165
               H PEF MLE Y A   Y+   +     I+  A           +          E 
Sbjct: 278 VDRSHSPEFAMLETYAAWGDYDDCARMTRESIQAVARDVFGSTTVTLADGTEFDFGGEEW 337

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILI 223
             I +  +             +     D   L   A   G+ V  D  W    +   I  
Sbjct: 338 PEIEMYPSLNEALQRKFPGQPEVTIDTDVETLKGIADVIGLDVPKDGGWGHGKLVEEIWE 397

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
              E    +     +  +P   S L   + + P  T++++LY    EL     EL+DP+ 
Sbjct: 398 VLCEDQ--LEGPIFVKNFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELVDPVI 455

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE + +      +E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E 
Sbjct: 456 QRERFEDQARLAAGGDDEAMVLDEDFLAAMEQGMPPTAGTGMGMDRLLMALTGLG-IRET 514

Query: 343 IWTPFSQSNQE 353
           +  P  +  Q+
Sbjct: 515 VLFPLVKPEQK 525


>gi|291516409|emb|CBK70025.1| Lysyl-tRNA synthetase (class II) [Bifidobacterium longum subsp.
           longum F8]
          Length = 560

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 151/366 (41%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR  F ++ F+E+++  
Sbjct: 199 LQPLPALHKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPM 258

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 259 LQTLHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 314

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ + +    +++  A                 +   E +
Sbjct: 315 VDATHAPEFTMVEAYQAYGTYDSIGQLVKELVQKTAMDVYGSHKVTLLDGTEYDFGGEWK 374

Query: 167 YITVAEAFARYANIDLGTTLDNPDQ-PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++               L   A + G+     +    +   +    
Sbjct: 375 TISMYDSLSEALGEEIVPNGGPEHPGTSVEHLAAIADKLGVERDDVENHGKLVEHLWEHF 434

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   +   P   ++++LY    EL     EL DPI QR
Sbjct: 435 YEDK--LYEPTFVRDFPVETSPLVKGHRTKPGVVEKWDLYVRGFELATGYSELNDPIVQR 492

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 493 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 551

Query: 345 TPFSQS 350
            P  + 
Sbjct: 552 FPLVKP 557


>gi|238061433|ref|ZP_04606142.1| lysyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237883244|gb|EEP72072.1| lysyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 502

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 87/364 (23%), Positives = 147/364 (40%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R             +  R     SLR+      F+E+++  
Sbjct: 150 LRPLPVAHKPLSEEARVRQRYVDLIVRPQARQMVRTRAAAVRSLRDCLHGQGFVEVETPM 209

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 210 LQLLHGGAA-ARPFVTHS---NALNTDLYLRIAPELFLKRAVVGGVDRVFEINRNFRNEG 265

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+  Y+ +     N+++ AA                   E +  
Sbjct: 266 VDSSHSPEFAMLEAYQAYGDYDTMASLTRNLVQQAAIAVAGSTVVAHAD----GREFDLG 321

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
               +   +  +      +   + +R  L   A + G+ V        +   +  E + P
Sbjct: 322 GEWRSVTLFGVLSEALGEEVTVRTERARLVEYADKVGLSVDPKWGPGKLAEELFEELVVP 381

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YP   S L   + ++P   ++++LY    EL  A  EL+DP+ QR R 
Sbjct: 382 --GLQAPTFVRDYPEETSPLTRAHRSEPGLAEKWDLYVLGFELGTAYSELVDPVVQRERL 439

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + Q   +  +E   +DEDFL  +   MP + G+ MG DRL+M +TG   I E I  P 
Sbjct: 440 VAQAQLAARGDDEAMRLDEDFLRAMEYGMPPAGGMGMGIDRLLMALTGLG-IRETILFPL 498

Query: 348 SQSN 351
            +  
Sbjct: 499 VRPE 502


>gi|25029089|ref|NP_739143.1| lysyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|23494376|dbj|BAC19343.1| putative lysyl-tRNA synthetase [Corynebacterium efficiens YS-314]
          Length = 536

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 85/368 (23%), Positives = 143/368 (38%), Gaps = 24/368 (6%)

Query: 1   MHQIPS-----------QP-WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P            +  + +     + R   L R  +  +LR+Y     F+E+++  
Sbjct: 173 LRPLPVAFADMSEDTRVRHRYTDLIMREQARTNALTRIKVMRALRKYLEGEDFLEVETPM 232

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     +     LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 233 LQTLHGGAA-ARPFVTHS---NAFDLDLYLRIAPELFLKRCVVGGMERVFEVNRNFRNEG 288

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF+MLE Y+A  +YE   +    +++  A+                +   E +
Sbjct: 289 ADSTHSPEFSMLETYQAWGTYETGARLIQGLVQFVAQEVFGTTEVTLADGTTYDLGGEWK 348

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIE 224
            I +  +             +   +     L   A   G+ V          +   I   
Sbjct: 349 TIEMYPSLNEALQRKFPGQPEVTVESSVEELREIAAVIGLAVPEKGGWGHGKLVEEIWEL 408

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E    +     +  +P   S L   +   P  T++++LY    EL     EL+DP+ Q
Sbjct: 409 LCEDQ--LYGPIFVKDFPVETSPLTRQHRDKPGVTEKWDLYVRGFELATGYSELVDPVIQ 466

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RFE + +      +E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E +
Sbjct: 467 RERFEDQARLAAGGDDEAMVLDEDFLAAMEQGMPPTAGCGMGIDRLLMALTGLG-IRETV 525

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 526 LFPLVKPE 533


>gi|227876368|ref|ZP_03994480.1| lysine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269975932|ref|ZP_06182936.1| lysyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|307700459|ref|ZP_07637498.1| lysine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|227842909|gb|EEJ53106.1| lysine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|269935760|gb|EEZ92290.1| lysyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|307614444|gb|EFN93674.1| lysine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 518

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 90/370 (24%), Positives = 140/370 (37%), Gaps = 31/370 (8%)

Query: 1   MHQIPSQPWWNR--------DFHYRRR-----------PFLLKRNMIQSSLREYFVENQF 41
           +  +P     ++        D   R+R             +  R  +  SLR Y  E  +
Sbjct: 159 LRPLPKTYTNDKGEEVTLSEDTRIRQRYLDMITRPAARDMVRNRARVVQSLRRYLDECGY 218

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           IE+++  LQ   G     R F T +   +     LYL+ +PE   K+ L  G +++F   
Sbjct: 219 IEVETPMLQVIHGGAA-ARPFETHM---NAYDMQLYLRIAPELFLKRCLIGGIDRVFEIN 274

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +RN      H PEFTM+E Y A+  Y Q+      +I+  A               N 
Sbjct: 275 RNFRNEGADSSHSPEFTMMEAYCAYGDYHQIADLTREMIQRCAREVYGTEVV----TLNE 330

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
             + +          Y ++             R  L   A +  I V        I   +
Sbjct: 331 GQKFDLSGTWRWMDLYGSLSEALGQQIDVNTPRDALVKIAGEHDIEVEDYHVTGKIVEML 390

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
               +     I   T +  +P   S L   +P  P   ++++L     E+     EL DP
Sbjct: 391 WETLVGDQ--IWEPTFVADFPEDTSPLVKGHPEKPGQVQKWDLIIRGFEVATGYSELNDP 448

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           + QR RFE +  +  K   E   +DEDFL  +   MP + G+ MG DRL+M +TG   I 
Sbjct: 449 VIQRARFEAQSLDAAKGDPEAMQLDEDFLVAMEHGMPPAGGMGMGLDRLLMTLTGLG-IR 507

Query: 341 EVIWTPFSQS 350
           E I  P  + 
Sbjct: 508 ETITFPLVKP 517


>gi|239621546|ref|ZP_04664577.1| lysyl-tRNA synthetase 1 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|312133944|ref|YP_004001283.1| lysu [Bifidobacterium longum subsp. longum BBMN68]
 gi|239515421|gb|EEQ55288.1| lysyl-tRNA synthetase 1 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|311773240|gb|ADQ02728.1| LysU [Bifidobacterium longum subsp. longum BBMN68]
          Length = 560

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 151/366 (41%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR  F ++ F+E+++  
Sbjct: 199 LQPLPALHKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPM 258

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 259 LQTLHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 314

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ + +    +++  A                 +   E +
Sbjct: 315 VDATHAPEFTMVEAYQAYGTYDSIGQLVKELVQKTAMDVYGSHKVTLLDGTEYDFGGEWK 374

Query: 167 YITVAEAFARYANIDLGTTLDNPDQ-PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++               L   A + G+     +    +   +    
Sbjct: 375 TISMYDSLSEALGEEIVPNGGPEHPGTSVEHLGAIADKLGVERDDVENHGKLVEHLWEHF 434

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   +   P   ++++LY    EL     EL DPI QR
Sbjct: 435 YEDK--LYEPTFVRDFPVETSPLVKGHRTKPGVVEKWDLYVRGFELATGYSELNDPIVQR 492

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 493 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 551

Query: 345 TPFSQS 350
            P  + 
Sbjct: 552 FPLVKP 557


>gi|319442421|ref|ZP_07991577.1| lysyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 540

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 86/372 (23%), Positives = 140/372 (37%), Gaps = 27/372 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        D   R R   L            R  +  +LR       F+E+++  
Sbjct: 175 LRPLPVAHKEMSEDTRIRHRYTDLIMREQARTNAMTRIKVMRALRNALERRGFLEVETPM 234

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +K+F     +RN  
Sbjct: 235 LQTLHGGAA-ARPFETHS---NALDIDLYLRIAPELYLKRCVVGGIDKVFEVNRNFRNEG 290

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF MLE Y+A+ +Y+   +   +II+  A                 +   E  
Sbjct: 291 VDSSHSPEFAMLETYQAYGTYDTGAQLIHDIIQEIAVEVFGSTTVTLVDGTGYDFGGEWR 350

Query: 167 YITVAEAFARYANIDLGTTLDNPDQP---DRHLLYLQAQQAGIRVAH--DDTWSDIFSRI 221
            + +  +                +         L   A+  G+ V          +   I
Sbjct: 351 VMEMYPSLNEALGRKFPEQTAVAEVTIDSTVEELKALAEDIGLVVPPKGGWGHGKLVEEI 410

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
                E    +     +  +P   S L   + + P   ++++LY    EL     EL+DP
Sbjct: 411 WEYLCEDQ--LYGPVFVRDFPVETSPLTRQHRSKPGVAEKWDLYVRGFELATGYSELVDP 468

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           + QR RFE + +      +E   +DEDFLA +   MP +SG  MG DRL+M +TG   I 
Sbjct: 469 VIQRERFEDQARLAADGDDEAMVLDEDFLAAMEQGMPPTSGNGMGIDRLLMALTGLG-IR 527

Query: 341 EVIWTPFSQSNQ 352
           E +  P  +  +
Sbjct: 528 ETVLFPMVKPER 539


>gi|288575820|ref|ZP_06393990.1| lysine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566802|gb|EFC88362.1| lysine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 306

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 85/316 (26%), Positives = 141/316 (44%), Gaps = 13/316 (4%)

Query: 38  ENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKI 97
              ++E+++  +   PG  T  + F T     + +  PLYL+ +PE   K+L+  G E++
Sbjct: 2   NEHYLEVETPMMHPIPGGAT-AKPFVTH---HNALDIPLYLRIAPELYLKRLVVGGLERV 57

Query: 98  FCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQN 156
           F    ++RN      H PEFTM+E+Y A   YE++M+   +IIR A+   N     S+  
Sbjct: 58  FEINRSFRNEGMSVRHNPEFTMIEFYEAFSDYERMMQMAEDIIRNASRTVNGTAKISYNG 117

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              +  S  E +T+ +A  +Y          +    D   L  +  + G  +        
Sbjct: 118 KEVDLESPFERLTIIDAIKKY-----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGS 172

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +   +     E    +   T +  YP   S LA         T+RFEL+    EL N   
Sbjct: 173 LQLALFEGCAESK--LWNPTFIVDYPVEVSPLARASDTKQGLTERFELFVVGRELANGYS 230

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL DP +Q  RF+ ++ +K    +E    D D++  +   +P + G  +G DRLVML+T 
Sbjct: 231 ELNDPEDQAERFKSQVAQKDAGDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTD 290

Query: 336 ANNINEVIWTPFSQSN 351
           +  I +VI  P  +  
Sbjct: 291 SQTIRDVILFPQMRPE 306


>gi|74214101|dbj|BAE29462.1| unnamed protein product [Mus musculus]
 gi|74219569|dbj|BAE29555.1| unnamed protein product [Mus musculus]
          Length = 438

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 88/371 (23%), Positives = 141/371 (38%), Gaps = 25/371 (6%)

Query: 1   MHQIPSQPW---WNRDFHYRRRPFLLK---------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +     R    +++         R  +  +LR Y     F+EI++  
Sbjct: 75  LRPLPVSFADMAEDTRVRQRYNDLIIREDARKNAMIRVKVMRALRNYLESQDFVEIETPM 134

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 135 LQTLHGGAA-ARPFITHS---NALDIDLYLRIAPELYLKRAVVGGIDRVFEINRNFRNEG 190

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI---FSFQNVNCNPFSEP 165
               H PEF MLE Y A   Y    +     I+  A           +          E 
Sbjct: 191 VDRSHSPEFAMLETYAAWGDYNDCARMTRESIQAVARDVFGSTTVTLADGTEFDFGGEEW 250

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILI 223
             I +  +             +     D   L   A   G+ V  D  W    +   I  
Sbjct: 251 PEIEMYPSLNEALQRKFPGQPEVTIDTDVETLKGIADVIGLDVPKDGGWGHGKLVEEIWE 310

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
              E    +     +  +P   S L   + ++P  T++++LY    EL     EL+DP+ 
Sbjct: 311 VLCEDQ--LEGPIFVKNFPVETSPLTRQHRSEPGVTEKWDLYVRGFELATGYSELVDPVI 368

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE + +      +E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E 
Sbjct: 369 QRERFEDQARLAAGGDDEAMVLDEDFLAAMEQGMPPTAGTGMGMDRLLMALTGLG-IRET 427

Query: 343 IWTPFSQSNQE 353
           +  P  +  Q+
Sbjct: 428 VLFPLVKPEQK 438


>gi|320162390|ref|YP_004175615.1| lysyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319996244|dbj|BAJ65015.1| lysyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 511

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 95/356 (26%), Positives = 154/356 (43%), Gaps = 25/356 (7%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             + +  YR+R                R     +LR+Y     F+E+++  LQ   G   
Sbjct: 159 LTDPETRYRQRYADLAVNPEVREVFRIRARAVKALRDYLDNMGFLEVETPILQPIYGGAA 218

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F T     + +++ LYL+ S E   K+LL    ++++     +RN      H PEF
Sbjct: 219 -ARPFVT---YHNQLKQNLYLRISFELYLKRLLVGMLDRVYEIGRDFRNEGVSYKHNPEF 274

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           T LE+Y A+  Y Q+M+    ++   A+ V      +++    +       + + +    
Sbjct: 275 TQLEFYMAYADYLQVMEITEQMVAYVAQQVLGTTTITYEGHTIDLTPPWRRLELRQGILE 334

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
              ID+         P    L    +  G++     +   +   +L + +EP   +   T
Sbjct: 335 TTGIDIDQH------PTAESLAEAMRAKGMQPKPGYSRGKLIDSLLGDYLEPT--LIQPT 386

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            L  YP   S LA   P +P  T+RFE Y   +ELCNA  EL DP++Q  RF +  ++  
Sbjct: 387 FLYNYPRDISPLAKSMPGNPLITERFEGYIGGMELCNAFTELNDPLDQEQRFLEMGRDYN 446

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
               E +P+DED+L  +   MP   G  MG DRLVML+   + I EVI  P  +  
Sbjct: 447 ADDEERHPMDEDYLRAMSYGMPPCGGFGMGIDRLVMLLADRHTIREVILFPHLREE 502


>gi|68536277|ref|YP_250982.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|68263876|emb|CAI37364.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411]
          Length = 1082

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 88/347 (25%), Positives = 142/347 (40%), Gaps = 16/347 (4%)

Query: 1    MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
            +H +  +     + + R    L  R+++ +++R    +  F+E+++  LQ   G   + R
Sbjct: 745  LHPLTRRGAGIGEVNAR----LRARSVVNAAIRRTLGDLGFMEVETPILQRVHGGA-NAR 799

Query: 61   AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
             F T     +   + LYL+ +PE   K+LL  G EK++     +RN      H PEFT +
Sbjct: 800  PFKTRS---NAANQDLYLRIAPELYLKRLLTQGAEKVYELGRVFRNEGVDATHNPEFTTV 856

Query: 121  EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
            E Y AH  YE +      II+ AA   + +                          Y  I
Sbjct: 857  EAYEAHGDYESMRWVAQRIIQAAATAYHGEPLVLDPEGNLVSIA----ENFPVKTVYGAI 912

Query: 181  DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                      + +   L       GI         ++   +    +E        T    
Sbjct: 913  SEKVGQSITPETNFETLLELCAVHGIATQPGWDSGEVVQEMYEALVECT--TTMPTFYTD 970

Query: 241  YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
            +P   S L   + + P   +R++L A  +EL  A  EL DP+EQR R E +  +      
Sbjct: 971  FPTSVSPLTRQHRSQPGVAERWDLVAWGVELGTAYSELTDPLEQRDRLEAQSLKAAGGDP 1030

Query: 301  ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E   +DE FL  L   MP + G+ +G DRL+ML+TG  +I EV+  P
Sbjct: 1031 EAMEVDEAFLRALEDGMPPTGGLGLGVDRLIMLLTG-RSIREVLSFP 1076


>gi|294155984|ref|YP_003560368.1| lysine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291599887|gb|ADE19383.1| lysine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 491

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 93/363 (25%), Positives = 153/363 (42%), Gaps = 28/363 (7%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YRRR                R  + S +R+YF E +++E+++ 
Sbjct: 138 LKPLPDKYHGLTDIEEKYRRRYVDLIVNEDSKKVFWTRTKVVSEIRKYFDELEYMEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L          R F T     + + +   L+ + E   KKLL  G ++++     +RN 
Sbjct: 198 FLHDYISGAA-ARPFKTH---HNALDQEFVLRIATEIPLKKLLVGGVDRVYEMGRIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+ + E +MK    + +  A+   +  +    V  +     + 
Sbjct: 254 GIDTTHNPEFTTIEFYEAYSNLEGMMKRTEEVFKRIAKRLGKYKYINNGVEIDLSKPFKR 313

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + +A +     D                   A++  I+V        I S +  E IE
Sbjct: 314 LDMVDAVSEATGEDFRKIS-------FEKACDIAKKNKIKVEKFHKIGHIISNLFEELIE 366

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S L+     DPRFT+R EL+    E  N   EL DPI+Q  R
Sbjct: 367 HK--LIEPTFVTGHPIEISPLSAKMD-DPRFTERAELFINTKEYSNMYTELSDPIDQLER 423

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE ++ EK    +E   ID DF+  L   MP + G  +G DRLVML +   +I +V+  P
Sbjct: 424 FEAQISEKNAGNDEATDIDYDFVDALEYGMPPAGGCGIGIDRLVMLFSEKESIRDVLLFP 483

Query: 347 FSQ 349
             +
Sbjct: 484 TLK 486


>gi|184201797|ref|YP_001856004.1| lysyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183582027|dbj|BAG30498.1| putative lysyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 1099

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 84/367 (22%), Positives = 154/367 (41%), Gaps = 21/367 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +PS      N +   R+R             L  R+   +++R+ F+E  ++E+++ 
Sbjct: 739  LRPVPSDHTGFTNPEARVRQRYLDLIVNKDSARLLRARSRGIAAMRQSFMERGYMEVETP 798

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  +  R F T +   +     LYL+ +PE   K L   G +KIF     +RN 
Sbjct: 799  MLQAVHGGAS-ARPFRTHI---NAYNADLYLRIAPELYLKHLCVGGMDKIFELNRNFRNE 854

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT +E Y AH  Y  +     ++I   A   + +  + +       +    
Sbjct: 855  GADATHNPEFTSVEAYAAHGDYNTMRVLTRDLIIEVATAIHGEPVAVRPDGNGGETRIRL 914

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +   T            +   A    +  + + T  ++   +  E +E
Sbjct: 915  DHEWPVIPVHQAVSEATGTLLTSHTPLEEVRAVASAHSVHWSEEMTAGEVVLELYDELVE 974

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                         +P   S L   +  DP+ ++R++L A   E+  A  EL+DP++QR+R
Sbjct: 975  GQ--TTLPVFYTDFPLETSPLTRTHRTDPKLSERWDLVAFGAEIGTAYSELVDPVDQRNR 1032

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              ++  +      E   +DE+FL  L   MP + G+ +G DR++M++TG  NI   +  P
Sbjct: 1033 LTEQSYKAAAGDPEAMEVDENFLTALEYAMPPTGGLGIGVDRMIMMLTGT-NIRATLAFP 1091

Query: 347  FSQSNQE 353
            F++ N++
Sbjct: 1092 FTRPNEQ 1098


>gi|31792827|ref|NP_855320.1| lysyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|78099175|sp|Q7VEV7|LYSX_MYCBO RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|31618417|emb|CAD96335.1| Possible lysyl-tRNA synthetase 2 lysX [Mycobacterium bovis AF2122/97]
          Length = 1172

 Score =  291 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 808  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 867

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 868  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 924  GVDFSHNPEFTLLEAYQAHAGYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 983

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 984  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 1043

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 1044 LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1101

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1102 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1160

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1161 RETLPFPLAKP 1171


>gi|227505952|ref|ZP_03936001.1| lysyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227197474|gb|EEI77522.1| lysyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 533

 Score =  291 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 89/370 (24%), Positives = 141/370 (38%), Gaps = 25/370 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R   L            R  +  +LR Y  +  F+EI++  
Sbjct: 171 LRPLPVAFADMNEETRVRQRYNDLIVREEARKNAMTRVKVMRALRNYLEDQGFVEIETPM 230

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 231 LQTLHGGAA-ARPFVTHS---NALDIDLYLRIAPELYLKRAVVGGIDRVFEINRNFRNEG 286

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS---EP 165
               H PEF MLE Y A   Y    +     I+  A+                     E 
Sbjct: 287 VDRSHSPEFAMLETYAAWGDYNDCARTTRESIQAVAQAVFGSHKVTLADGTEYDFGGEEW 346

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILI 223
             I +  +             +     D   L   A   G+ V  +  W    +   I  
Sbjct: 347 PEIEMYPSLNEALQRKFPGQPEVTIDTDVETLKGIADVIGLDVPKNGGWGHGKLVEEIWE 406

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
              E    +     +  +P   S L   + + P  T++++LY    EL     EL+DP+ 
Sbjct: 407 VLCEDQ--LEGPIFVKNFPVETSPLTRQHRSIPGVTEKWDLYVRGFELATGYSELVDPVI 464

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE + +      +E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E 
Sbjct: 465 QRERFEDQARLAAGGDDEAMVLDEDFLAAMEQGMPPTAGTGMGMDRLLMALTGLG-IRET 523

Query: 343 IWTPFSQSNQ 352
           +  P  +  +
Sbjct: 524 VLFPIVKPEK 533


>gi|121637548|ref|YP_977771.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224990023|ref|YP_002644710.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|296439664|sp|A1KJ57|LYSX_MYCBP RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|296439665|sp|C1ANR3|LYSX_MYCBT RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|121493195|emb|CAL71666.1| Possible lysyl-tRNA synthetase 2 lysX [Mycobacterium bovis BCG str.
            Pasteur 1173P2]
 gi|224773136|dbj|BAH25942.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
          Length = 1172

 Score =  291 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1    MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 808  LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 867

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 868  ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 923

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                 H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 924  GVDFSHNPEFTLLEAYQAHAGYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 983

Query: 161  PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                 +   +      +  I                L      AG+          +   
Sbjct: 984  HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 1043

Query: 221  ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
            +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 1044 LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 1101

Query: 281  PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
            P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 1102 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 1160

Query: 340  NEVIWTPFSQS 350
             E +  P ++ 
Sbjct: 1161 RETLPFPLAKP 1171


>gi|304373317|ref|YP_003856526.1| Lysyl-tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
 gi|304309508|gb|ADM21988.1| Lysyl-tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1]
          Length = 492

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 155/368 (42%), Gaps = 29/368 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R  I S +R++     ++E+ + 
Sbjct: 138 LKPLPDKFHGINDVDEKYRKRYLDLISNPETKQVFFTRTKIISLIRQFLDNLNYMEVTTP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ      +  R F+T     + +    YL+ + E   KKLL  G ++++     +RN 
Sbjct: 198 ILQSLLTGAS-ARPFTTFY---NSLHANFYLRIATELPLKKLLVGGLDRVYEIGKIFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN--QKIFSFQNVNCNPFSEP 165
                H PEFT +E+Y A+ + E +M+    I +   +  N   K   F     +     
Sbjct: 254 GVDTTHNPEFTSIEFYEAYANLETMMERTEAIFKFLVDKLNIKNKKIVFSEYEIDFNLPF 313

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
               + +  +    I+L T            L   AQ   I++        I + +  E 
Sbjct: 314 NKFDLVDKTSEILGINLKTQS-------FEQLKAIAQTHNIKIEKFYQSGHIINALFEEF 366

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  +P   S LA     DPRFT+R EL+    E  N  +EL DP +Q 
Sbjct: 367 VEPK--LIQPTFVYGHPIEISPLAKKDEKDPRFTQRAELFIAKKEFANMFNELNDPEDQL 424

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +++EK     E   ID DF+  L   MP + G  +G DRLVML+T   +I EVI 
Sbjct: 425 QRFENQIKEKDLGNEEANEIDYDFVDSLKYGMPPAGGCGIGIDRLVMLLTSKTSIREVIL 484

Query: 345 TPFSQSNQ 352
            P  ++ +
Sbjct: 485 FPQLKAKK 492


>gi|23466201|ref|NP_696804.1| lysyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|189440639|ref|YP_001955720.1| lysyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|227546547|ref|ZP_03976596.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|322691799|ref|YP_004221369.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|23326943|gb|AAN25440.1| lysyl-tRNA synthetase 1 [Bifidobacterium longum NCC2705]
 gi|189429074|gb|ACD99222.1| Lysyl-tRNA synthetase class II [Bifidobacterium longum DJO10A]
 gi|227212864|gb|EEI80743.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|320456655|dbj|BAJ67277.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
          Length = 560

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 152/366 (41%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR  F ++ F+E+++  
Sbjct: 199 LQPLPALHKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPM 258

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 259 LQTLHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 314

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ + +    +++  A                 +   E +
Sbjct: 315 VDATHAPEFTMVEAYQAYGTYDSIGQLVKELVQKTAMDVYGSHKVTLLDGTEYDFGGEWK 374

Query: 167 YITVAEAFARYANIDL-GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++      +        L   A + G+     +    +   +    
Sbjct: 375 TISMYDSLSESLGEEIVPNGGPDAPGTSVEHLGAIADKLGVERDDVENHGKLVEHLWEHF 434

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   +   P   ++++LY    EL     EL DPI QR
Sbjct: 435 YEDK--LYEPTFVRDFPVETSPLVKGHRTKPGVVEKWDLYVRGFELATGYSELNDPIVQR 492

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 493 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 551

Query: 345 TPFSQS 350
            P  + 
Sbjct: 552 FPLVKP 557


>gi|227502073|ref|ZP_03932122.1| lysine tRNA ligase [Corynebacterium accolens ATCC 49725]
 gi|227077228|gb|EEI15191.1| lysine tRNA ligase [Corynebacterium accolens ATCC 49725]
          Length = 525

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 86/371 (23%), Positives = 141/371 (38%), Gaps = 25/371 (6%)

Query: 1   MHQIPSQPW---WNRDFHYRRRPFLLK---------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +     R    +++         R  +  +LR Y     F+EI++  
Sbjct: 162 LRPLPVSFADMAEDTRVRQRYNDLIIREEARKNAMVRVKVMRALRNYLESQDFVEIETPM 221

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 222 LQALHGGAA-ARPFITHS---NALDIDLYLRIAPELYLKRAVVGGIDRVFEINRNFRNEG 277

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI---FSFQNVNCNPFSEP 165
               H PEF MLE Y A   Y    +     I+  A           +          + 
Sbjct: 278 VDRSHSPEFAMLETYAAWGDYNDCARMTRESIQSVAREVFGSTTVTLADGTDFDFGGDQW 337

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILI 223
             I +  +             +     D   L   A+  G+ V   + W    +   I  
Sbjct: 338 PEIEMYPSLNEALQRKFPGQPEVTIDTDVETLKGIAKVIGLDVPKGEGWGHGKLVEEIWE 397

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
              E    +     +  +P   S L   + ++P  T++++LY    EL     EL+DP+ 
Sbjct: 398 VLCEDQ--LEGPIFVKNFPVETSPLTRQHRSEPGVTEKWDLYVRGFELATGYSELVDPVV 455

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE + +       E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E 
Sbjct: 456 QRARFEDQARLAAGGDEEAMVLDEDFLAAMEQGMPPTAGTGMGMDRLLMALTGLG-IRET 514

Query: 343 IWTPFSQSNQE 353
           +  P  +  Q+
Sbjct: 515 VLFPLVKPEQK 525


>gi|316976293|gb|EFV59613.1| lysyl-tRNA synthetase [Trichinella spiralis]
          Length = 531

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 151/366 (41%), Gaps = 56/366 (15%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +  +  +  YR R              ++R+ I + +R+Y     F+E+++ 
Sbjct: 199 LHMLPHLHYGLKNQETRYRMRYLDLIINNNVRNIFIRRSQILNYIRKYLDSIGFLEVETP 258

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  T  + F T     + + + LY++ +PE   K L+  G ++++     +RN 
Sbjct: 259 MMNMIPGGAT-AKPFVTH---HNELDRDLYMRVAPELYLKMLIVGGIDRVYEIGRNFRNE 314

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM E+Y A+  Y  LMK   +++    +          + N     E   
Sbjct: 315 GIDLTHNPEFTMCEFYMAYADYNDLMKITEDLLSGMVKHLFGSYLVTYHPNGPEG-EAVT 373

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I     + + +                   +   ++  +++   +        +    + 
Sbjct: 374 IDFTPPYRKISM-----------------YFELEKKLNVKLPPPNELVKEDLLVEGLFL- 415

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                               L +++ A P  T+RFEL+    ELCNA  EL DP+ QR R
Sbjct: 416 -------------------FLFSLHRAIPGLTERFELFVMTRELCNAYTELNDPVVQRER 456

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE++   K     E  PIDE F   L   +P ++G  MG DRL ML+T  NNI EV+  P
Sbjct: 457 FEEQAANKAAGDEEAQPIDEVFCNALEHGLPPTAGWGMGIDRLTMLLTDQNNIKEVLLFP 516

Query: 347 FSQSNQ 352
             + ++
Sbjct: 517 AMKPDE 522


>gi|322689860|ref|YP_004209594.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|320461196|dbj|BAJ71816.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 560

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 151/366 (41%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR  F ++ F+E+++  
Sbjct: 199 LQPLPALHKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPM 258

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 259 LQTLHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 314

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ + +    +++  A                 +   E +
Sbjct: 315 VDATHAPEFTMVEAYQAYGTYDSIGQLVKELVQKTAMDVYGSHKVTLLDGTEYDFGGEWK 374

Query: 167 YITVAEAFARYANIDLGTTLDNPDQ-PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++               L   A + G+     +    +   +    
Sbjct: 375 TISMYDSLSESLGEEIVPNGGPEHPGTSVEHLGEIADKLGVERDDVENHGKLVEHLWEHF 434

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   +   P   ++++LY    EL     EL DPI QR
Sbjct: 435 YEDK--LYEPTFVRDFPVETSPLVKGHRTKPGVVEKWDLYVRGFELATGYSELNDPIVQR 492

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 493 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 551

Query: 345 TPFSQS 350
            P  + 
Sbjct: 552 FPLVKP 557


>gi|212716371|ref|ZP_03324499.1| hypothetical protein BIFCAT_01290 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660624|gb|EEB21199.1| hypothetical protein BIFCAT_01290 [Bifidobacterium catenulatum DSM
           16992]
          Length = 558

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 86/366 (23%), Positives = 153/366 (41%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR+ F ++ F+E+++  
Sbjct: 198 LQPLPALHKDLNEDTRTRKPYIGMIADEKIRNMVRNRSKAVASLRKTFADHDFLEVETPM 257

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 258 LQTVHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 313

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ +      +++  A                 +   E +
Sbjct: 314 VDATHAPEFTMVEAYQAYGNYDTIGALVKQLVQDTAMDVFGTHKVTLLDGTEYDFGGEWK 373

Query: 167 YITVAEAFARYANIDL-GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++      +        L   A + G+     +    +   +    
Sbjct: 374 TISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGAIADKLGVERDDVENHGKLVEHLWEHF 433

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   + + P   ++++LY    EL     EL DP+ QR
Sbjct: 434 YEDK--LFEPTFVRDFPVETSPLVKGHRSKPGVVEKWDLYVRGFELATGYSELNDPVVQR 491

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 492 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 550

Query: 345 TPFSQS 350
            P  + 
Sbjct: 551 FPLVKP 556


>gi|169629405|ref|YP_001703054.1| lysyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|296439663|sp|B1MAX9|LYSX_MYCA9 RecName: Full=Lysylphosphatidylglycerol biosynthesis bifunctional
            protein LysX; Includes: RecName: Full=Lysyl-tRNA
            synthetase; Includes: RecName: Full=Phosphatidylglycerol
            lysyltransferase; AltName: Full=Lysylphosphatidylglycerol
            synthetase; Short=LPG synthetase
 gi|169241372|emb|CAM62400.1| Probable lysyl-tRNA synthetase 2 LysX [Mycobacterium abscessus]
          Length = 1110

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 149/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +     + +   R R             +  R+ I +SLR   +   F+E+++ 
Sbjct: 753  LHPLPDKRKGLTDPEARVRARYLDLAINPEAREQIAARSAIITSLRNTLLAQGFLEVETP 812

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T +   +     LYL+ +PE   K+L   G EK+F    A+RN 
Sbjct: 813  ILQQVHGGA-NARPFLTHI---NAYNLDLYLRIAPELYLKRLCVGGVEKVFELGRAFRNE 868

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y    +    +I+ AA+ A+      +       +  + 
Sbjct: 869  GVDFSHNPEFTLLEAYQAHADYVTWAQTTQRLIQNAAKAAHGAEVVMRPGADGRLAPVDI 928

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +      +     +   L    Q A ++         +   +    +E
Sbjct: 929  GGEWPIVPVHEAVSRALGEEVNAATEVPTLQRFCQSAEVQFNPRWDAGHLVLELYERLVE 988

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
             +      T    +P   S L   + +     +R++L A  +EL  A  EL DP+EQR R
Sbjct: 989  KH--TTSPTFYSDFPVSVSPLTRPHRSIAGLAERWDLVAWGVELGTAYTELTDPVEQRRR 1046

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              ++         E   +DEDFL  +   M  + G+ MG DR+VML+TG  +I E +  P
Sbjct: 1047 LYEQSLLAAGGDAEAMELDEDFLRAMEYAMAPTGGMGMGVDRVVMLITG-RSIRETLPFP 1105

Query: 347  FSQSN 351
             ++  
Sbjct: 1106 LAKPR 1110


>gi|261417017|ref|YP_003250700.1| lysyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261373473|gb|ACX76218.1| lysyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302327834|gb|ADL27035.1| lysine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 501

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 93/352 (26%), Positives = 154/352 (43%), Gaps = 26/352 (7%)

Query: 13  DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
           D  YR+R              +KR+ I  ++REY +E  FIE+++ +LQ   G   + R 
Sbjct: 162 DTRYRQRYIDMALNDDVKEVFIKRSKIMQAIREYLIEKGFIEVETPTLQPIYGGA-NARP 220

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F+T     +     LYL+ +PE   K+ +  G EK+F F   +RN      H PEFT LE
Sbjct: 221 FTTH---HNACDMTLYLRVAPELYLKRCIIGGMEKVFEFCKNFRNEGMDRTHSPEFTGLE 277

Query: 122 WYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +Y A+  Y  +M    NI  R           ++Q    +  +     ++ EA  ++  I
Sbjct: 278 FYEAYADYNDMMVHFENIYERACIAANGTTKVNYQGKEIDFKAPWPRYSMIEAIEKFGGI 337

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
            +    D         +  + ++ G  +  + T       +    +E    +   TI+  
Sbjct: 338 KVNDMSD-------DEIKAKMEELGGHLDGEFTRGRGILELFDLTVEGK--LIQPTIIKD 388

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
            P   + L   +       ++FE YA   EL NA  EL DPI QR   E +++  +    
Sbjct: 389 MPTESTPLCKKHRTTAGLIEQFEPYANGWELGNAYTELNDPIRQRELLEDQVRRGRGGEG 448

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           ET+P+DE+F+  +   +P + G+  G DR+VML+T    I +V   P  +  
Sbjct: 449 ETHPMDENFMHAVESGLPPTGGVGFGIDRMVMLLTNQQTIRDVQLFPLMKPE 500


>gi|306817260|ref|ZP_07451006.1| lysine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|304649940|gb|EFM47219.1| lysine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 518

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 90/370 (24%), Positives = 141/370 (38%), Gaps = 31/370 (8%)

Query: 1   MHQIPSQPWWNR--------DFHYRRR-----------PFLLKRNMIQSSLREYFVENQF 41
           +  +P     ++        D   R+R             +  R  +  SLR Y  E  +
Sbjct: 159 LRPLPKTYTNDKGEEVTLSEDTRIRQRYLDMITRPAARDMVRNRARVVQSLRRYLDECGY 218

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           IE+++  LQ   G     R F T +   +     LYL+ +PE   K+ L  G +++F   
Sbjct: 219 IEVETPMLQVIHGGAA-ARPFETHM---NAYDMQLYLRIAPELFLKRCLIGGIDRVFEIN 274

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +RN      H PEFTM+E Y A+  Y Q+      +I+ +A               N 
Sbjct: 275 RNFRNEGADSSHSPEFTMMEAYCAYGDYHQIADLTREMIQRSAREVYGTEVV----TLNE 330

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
             + +          Y ++             R  L   A +  I V        I   +
Sbjct: 331 GQKFDLSGTWRWMDLYGSLSEALGQQIDVNTPRDALVKIAGEHDIEVEDYHVTGKIVEML 390

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
               +     I   T +  +P   S L   +P  P   ++++L     E+     EL DP
Sbjct: 391 WETLVGDQ--IWEPTFVADFPEDTSPLVKGHPEKPGQVQKWDLIIRGFEVATGYSELNDP 448

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           + QR RFE +  +  K   E   +DEDFL  +   MP + G+ MG DRL+M +TG   I 
Sbjct: 449 VIQRARFEAQSLDAAKGDPEAMQLDEDFLVAMEHGMPPAGGMGMGLDRLLMTLTGLG-IR 507

Query: 341 EVIWTPFSQS 350
           E I  P  + 
Sbjct: 508 ETITFPLVKP 517


>gi|15889813|ref|NP_355494.1| lysyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|9957273|gb|AAG09300.1|AF177860_3 lysyl-tRNA synthetase homolog [Agrobacterium tumefaciens]
 gi|15157745|gb|AAK88279.1| lysyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 354

 Score =  291 bits (745), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 192/341 (56%), Positives = 235/341 (68%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
            PWW  D H  RR FLL RN IQS+ R YF    F+E+D+ +LQ SPGNE H+ AF+T+ 
Sbjct: 9   SPWWTPDVHADRRAFLLGRNAIQSAFRGYFARADFLEVDTATLQVSPGNEAHLHAFATDG 68

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
           +       PLYL TSPEF+CKKLLAAGE++I CFAH +RN E+G LH PEFTMLEWYR  
Sbjct: 69  LTPGGEAVPLYLHTSPEFACKKLLAAGEKRISCFAHVYRNRERGPLHHPEFTMLEWYRVG 128

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
           E+YE LMKD  N++  AAE    K F+++  + +PF EPE ++VAEAF RYA IDL  T+
Sbjct: 129 ETYESLMKDSANLLALAAETTGTKHFTYRGRSVDPFLEPERLSVAEAFERYAGIDLLATI 188

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
               + D   L      AGIRVA DDTW+D+FSR+++E++EP LG    TILD YP  E+
Sbjct: 189 GRNGETDERHLAASLTNAGIRVADDDTWADMFSRVIVERVEPELGFGRATILDEYPTSEA 248

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA   P D R  +RFELYAC +EL NA  EL D  EQR RFE EM EK ++Y ETYP+D
Sbjct: 249 ALARKSPGDARVAERFELYACGVELANAFGELTDAAEQRRRFEMEMAEKLRVYGETYPLD 308

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           EDFLA L  MP +SGIA+GFDRLVML TGA  I+ V+W P 
Sbjct: 309 EDFLAALAIMPPASGIALGFDRLVMLATGAPRIDLVMWAPV 349


>gi|15890512|ref|NP_356184.1| lysyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|39932225|sp|Q8U7H6|SYK_AGRT5 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|15158751|gb|AAK88969.1| lysyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 499

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 159/369 (43%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              L+R+ I S +R +     F+E+++ 
Sbjct: 143 LLPMPEKWHGVSDIELRYRKRHLDILANEDSKLRFLQRSKILSGIRRFMEAEGFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            LQ   G  T    F T     + ++  +YL+ +PE   K+ L +G  +K+F     +RN
Sbjct: 203 MLQTVYGGAT-ADPFKT---FHNTLKMDMYLRIAPELFLKRTLVSGLSDKVFEINRNFRN 258

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A          FQ    +     
Sbjct: 259 EGVSTRHNPEFTMMECYWAYADYEDIMGLVERLFETLAIALHGTTEVEFQGQTISFKGPF 318

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + + + +A      ID      + +                 V  D TW +  + I  EK
Sbjct: 319 KRVPMPDAVKEATGIDFLAIKTDEEARAAAKAAGF------AVEKDWTWGECLAFIFEEK 372

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   + +  +P   S  A   P +PR  +RFE Y    E+ NA  EL DP EQR
Sbjct: 373 VEAT--LIQPSHVTHFPKDISPFAKEVPGEPRLVERFESYCNAWEVGNAFSELNDPEEQR 430

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  +++++      +   +D++FL  +   MP + G+ +G DRL+ML+T A +I +VI 
Sbjct: 431 RRMVEQLEQAHARGEKDKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDVIL 490

Query: 345 TPFSQSNQE 353
            P  ++  +
Sbjct: 491 FPARRNKAD 499


>gi|291457273|ref|ZP_06596663.1| lysine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381108|gb|EFE88626.1| lysine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 560

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR  F  + F+E+++  
Sbjct: 199 LQPLPALHKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAVASLRRTFDAHDFLEVETPM 258

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 259 LQTLHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 314

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ + +    +++  A                 +   E +
Sbjct: 315 VDATHAPEFTMVEAYQAYGTYDSIGQLVKELVQQTAMDVYGSHKVTLLDGTEYDFGGEWK 374

Query: 167 YITVAEAFARYANIDLGTTLDNPDQ-PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++               L   A + G+     +    +   +    
Sbjct: 375 TISMYDSLSEALGEEIVPNGGPEHPGTSVEHLGEIADKLGVERDDVENHGKLVEHLWEHF 434

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   +   P   ++++LY    EL     EL DPI QR
Sbjct: 435 YEDK--LYEPTFVRDFPVETSPLVKGHRTKPGVVEKWDLYVRGFELATGYSELNDPIVQR 492

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 493 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 551

Query: 345 TPFSQS 350
            P  + 
Sbjct: 552 FPLVKP 557


>gi|261338209|ref|ZP_05966093.1| lysine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270276855|gb|EFA22709.1| lysine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 574

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 150/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       D   R+           R  +  R+   SSLR  F E+ F+E+++  
Sbjct: 220 LQPLPALHKELNEDTRTRKPYIGMIADENIRNMVRNRSKAVSSLRHTFEEHGFLEVETPM 279

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LY++ +PE   K+ L  G +++F     +RN  
Sbjct: 280 LQTIHGGAA-ARPFTTHM---NAFDLDLYMRIAPELFLKRCLVGGIDRVFEINRDFRNEG 335

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ--KIFSFQNVNCNPFSEPE 166
               H PEFTM+E Y A+ +Y+ + K    +I+  A        +        +   E +
Sbjct: 336 VDATHAPEFTMVEAYEAYGNYDTIAKLTKELIQKTAMDVFGSLTVTLLDGTEYDFGGEWK 395

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++ ++ +      +        +     L   A + G+     +    +   +     
Sbjct: 396 QISMYDSLSEALGEQITP------ETSMETLAKFADKLGVERDEVENRGKLVEHLWEHFY 449

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L   +   P   ++++LY    EL     EL DPI QR 
Sbjct: 450 EDK--LYEPTFVRDFPVETSPLVKGHRTKPGVVEKWDLYVRGFELATGYSELNDPIVQRE 507

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF ++ +       E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I  
Sbjct: 508 RFVEQAKAALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETITF 566

Query: 346 PFSQS 350
           P  + 
Sbjct: 567 PLVKP 571


>gi|32491190|ref|NP_871444.1| hypothetical protein WGLp441 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340438|sp|Q8D2B3|SYK_WIGBR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|25166397|dbj|BAC24587.1| lysS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 493

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 165/342 (48%), Gaps = 14/342 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            + + R     R++I +++R++ ++  F+E+++  +   PG     + F T       + 
Sbjct: 164 TNKKSRNTFKTRSIIINNIRKFMIKENFVEVETPMMHNIPGGGLS-KPFITH---HSSLN 219

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
             LYL+ +PE   K+L+  G EKIF     +RN      H PEFTM+E+Y A+  YE LM
Sbjct: 220 IDLYLRIAPELYLKQLIVGGFEKIFEINRNFRNEGLSSNHNPEFTMMEFYVAYIDYEDLM 279

Query: 134 KDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           K   N++    +   N+   ++ N   N     + I++ ++   Y        +   D  
Sbjct: 280 KIVENLLNYIVDKIFNKNKINYNNFMINFEKPFKKISMQDSICEYC-----KNVTQSDIS 334

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           D  ++   A+   I V  +     +  +I  EK+E N  +   T +  YP   S LA   
Sbjct: 335 DIKIITDIAKSFNITVEKNWGVGKLQEKIFSEKVEKN--LIQPTFVIDYPTEISPLARAK 392

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             +   T RFEL+ C  E+ N   EL DP EQ++RF ++++ K  +  +    D+D++  
Sbjct: 393 KNNKLITDRFELFVCGNEIGNGFSELNDPKEQKNRFLEQLKNK-TLEEQNIFYDKDYITS 451

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L   +P ++G  +G DRLVM++T   +I +VI  P  ++  +
Sbjct: 452 LEYGLPPTAGCGIGIDRLVMILTNNYSIKDVILFPTLRNANK 493


>gi|296446349|ref|ZP_06888294.1| tRNA synthetase class II (D K and N) [Methylosinus trichosporium
           OB3b]
 gi|296256122|gb|EFH03204.1| tRNA synthetase class II (D K and N) [Methylosinus trichosporium
           OB3b]
          Length = 374

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 181/349 (51%), Positives = 236/349 (67%), Gaps = 5/349 (1%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
            PWW RD +  R+PFL  R  I ++LR++F    F E+++ +LQ SPGNETHI AF+T+L
Sbjct: 29  SPWWARDVYADRKPFLKARAKIAAALRQFFAREGFCEVETAALQLSPGNETHISAFATDL 88

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
           I        LYL TSPEFSCKKLLAAGEE+IF F+  +RN E+  LH PEFTMLEWYRA 
Sbjct: 89  IDSAGAASRLYLHTSPEFSCKKLLAAGEERIFTFSRVFRNRERSALHHPEFTMLEWYRAG 148

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              E++M+DC  ++  AAE    + F  +  + + F EPE I+  EAF RYA IDL   +
Sbjct: 149 APPERVMEDCAGLLAAAAEAVGAERFVHRGSSVDAFEEPEAISCREAFDRYAGIDLAALI 208

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
                 DR  L   A + GIRV  DD+WSD+FS+IL EK+EP LG +  T+L  YP  E+
Sbjct: 209 G-----DRDGLARAAVRDGIRVTPDDSWSDLFSKILSEKVEPQLGRSRATLLCDYPLSEA 263

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA     DPRF +RFEL+AC +EL N   EL DPIEQR RFE++M+E+++IY E YPID
Sbjct: 264 ALARPKAQDPRFAERFELFACGVELANGFGELTDPIEQRRRFEEQMEERQRIYGERYPID 323

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
            DFLA L +MP +SG+A+GFDRLVML TGA  I +V+WTP +++  + +
Sbjct: 324 ADFLAALAQMPPASGVALGFDRLVMLATGAERIEQVLWTPVAEAGTQGV 372


>gi|225350977|ref|ZP_03742000.1| hypothetical protein BIFPSEUDO_02556 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158433|gb|EEG71675.1| hypothetical protein BIFPSEUDO_02556 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 558

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 86/366 (23%), Positives = 153/366 (41%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR+ F ++ F+E+++  
Sbjct: 198 LQPLPALHKDLNEDTRTRKPYIGMIADEKMRNMVRNRSKAVASLRKTFADHDFLEVETPM 257

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 258 LQTVHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 313

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ +      +++  A                 +   E +
Sbjct: 314 VDATHAPEFTMVEAYQAYGNYDTIGALVKQLVQDTAMDVFGTHKVTLLDGSEYDFGGEWK 373

Query: 167 YITVAEAFARYANIDL-GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++      +        L   A + G+     +    +   +    
Sbjct: 374 TISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGAIADKLGVERDDVENHGKLVEHLWEHF 433

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   + + P   ++++LY    EL     EL DP+ QR
Sbjct: 434 YEDK--LFEPTFVRDFPVETSPLVKGHRSKPGVVEKWDLYVRGFELATGYSELNDPVVQR 491

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 492 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 550

Query: 345 TPFSQS 350
            P  + 
Sbjct: 551 FPLVKP 556


>gi|91201443|emb|CAJ74503.1| strongly similar to lysyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 477

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 160/366 (43%), Gaps = 40/366 (10%)

Query: 5   PSQPWWNRDFHYRRRP-------------FLLKRNMIQSSLREYFVENQFIEIDSMSLQY 51
           P +    +D   R R                LKR  I + +R +  E  F+E+++  +Q 
Sbjct: 134 PEKWHGLKDIELRHRQRYVDLFTNQDVMQTFLKRIQIINHIRAFLNERDFVEVETPMMQP 193

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
            PG     R F T     + +   LYL+ +PE   K+LL  G E+++     +RN     
Sbjct: 194 IPGGAV-ARPFITH---HNALDIDLYLRIAPELYLKRLLVGGMERVYEINRNFRNEGIST 249

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPEYITV 170
            H PEFTM+E Y+A+  Y  +M+    +I   A     K   SF  +  N        T 
Sbjct: 250 RHNPEFTMMELYQAYSDYNGMMELTEELITSLAMKIQGKYELSFGEITVNMTPPWRRATF 309

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            E    ++ I            D   L  +++++G+   +  +  +I + +  E +E   
Sbjct: 310 CELLKEHSGISYD---------DEEGLIRKSKESGLE-TNGISRDNIANTLFEELVEKT- 358

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
            +   T +  YP     L      DPRF +RFELY  ++E+ N+  EL D IEQ  R  +
Sbjct: 359 -LVNPTFVLDYPTSICPLTKTCAHDPRFAQRFELYIASMEVANSYSELNDSIEQDRRLHE 417

Query: 291 EMQEKKKIYNET---YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           ++        ET     IDEDFL  L   MP + G+ +G DRL+ML+T   +I EVI  P
Sbjct: 418 QI------GTETDITGKIDEDFLTALKYGMPPAGGLGIGIDRLIMLLTNNVSIREVILFP 471

Query: 347 FSQSNQ 352
             +  Q
Sbjct: 472 LLKPKQ 477


>gi|227494365|ref|ZP_03924681.1| lysyl-tRNA synthetase [Actinomyces coleocanis DSM 15436]
 gi|226832099|gb|EEH64482.1| lysyl-tRNA synthetase [Actinomyces coleocanis DSM 15436]
          Length = 1084

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 147/367 (40%), Gaps = 21/367 (5%)

Query: 1    MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  IP+      D     RRR             +  R+ +  S+R+  +++ F+E+++ 
Sbjct: 725  LQPIPALWQGLTDEQMKVRRRYLDLIVNPVARERVRVRSQVIQSIRQTLLDDTFLEVETP 784

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T     +     LYL+ +PE   K+L+  G +++F     +RN 
Sbjct: 785  LLQTIHGGA-NARPFRT---YINAYNLDLYLRIAPELYLKRLMVGGADRVFEIGRNFRNE 840

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFTMLE Y+A+  Y  + +    II  AA+ A          +     E + 
Sbjct: 841  GADATHNPEFTMLEAYQAYGDYNSMRELTQRIIVNAAKTALGTTVIRGMASDGQIHEVDL 900

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  I      D         L   A + G+ V    +   +   +  E  E
Sbjct: 901  AQPWRVITVHQGIAEACGRDVTVDTPVSELLEIAAEHGLEVDPGISRGQLILDLHEELAE 960

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
             +      T    +P   S L   +  D R  ++++L     E+  A  EL+DP+ QR R
Sbjct: 961  QH--TIAPTFYCDFPTEVSPLTRQHREDERIAEKWDLICFGAEVATAYSELVDPVVQRER 1018

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               +         E   +DEDFL  L   MP S G+ MG DRLVM++T   +I E I  P
Sbjct: 1019 LLAQSLLAANGDPEAMEVDEDFLLALEYAMPPSGGMGMGVDRLVMMLT-QTSIRETIIFP 1077

Query: 347  FSQSNQE 353
              +  + 
Sbjct: 1078 LVKPQKN 1084


>gi|188582435|ref|YP_001925880.1| tRNA synthetase class II (D K and N) [Methylobacterium populi
           BJ001]
 gi|179345933|gb|ACB81345.1| tRNA synthetase class II (D K and N) [Methylobacterium populi
           BJ001]
          Length = 352

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 235/344 (68%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           S PWW+   H  RRP LL RN I ++ R +F +  F+E+++ +LQ SPGNE H+ AF+TE
Sbjct: 5   SSPWWHPGIHADRRPLLLTRNRILAAFRAWFSDADFVEVEAAALQVSPGNEAHLSAFATE 64

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            I+ D  R+PLYL TSPEF+CKKLLAAGE ++F  AH +RN E+G LH PEFTMLEWYRA
Sbjct: 65  AILPDGGREPLYLHTSPEFACKKLLAAGEPRLFSLAHVFRNRERGALHHPEFTMLEWYRA 124

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
              Y+ LM+D   ++  AAE A  K  +F+    +PF+  E +T+AEAF RYA IDL  T
Sbjct: 125 GTDYDALMQDGAALLALAAETAGVKRLTFRGREADPFAAFERLTLAEAFHRYAAIDLLAT 184

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L       G+RVA DDTW+D+FSR+L+  IEP+LG    TIL  YP  E
Sbjct: 185 VSADGATDRDTLADAVMTRGLRVAPDDTWADLFSRVLVGLIEPHLGQGRPTILCEYPVSE 244

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA   P DPR  +RFELYAC +EL NA  EL DP EQR RFE EM EK ++Y E YPI
Sbjct: 245 AALARPSPRDPRVAERFELYACGVELANAFGELTDPAEQRRRFEAEMAEKARVYGERYPI 304

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           DE+FL  L  MP +SGIA+GFDRLVML TGA  I++VIWTP ++
Sbjct: 305 DEEFLEALAMMPAASGIALGFDRLVMLATGAPRIDDVIWTPVAR 348


>gi|306836901|ref|ZP_07469855.1| lysine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567206|gb|EFM42817.1| lysine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 525

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 139/371 (37%), Gaps = 25/371 (6%)

Query: 1   MHQIPSQPW---WNRDFHYRRRPFLLK---------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +     R    +++         R  +  +LR Y     F+EI++  
Sbjct: 162 LRPLPVSFADMAEDTRVRQRYNDLIIREEARKNAMVRVKVMRALRNYLESQDFVEIETPM 221

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 222 LQTLHGGAA-ARPFITHS---NALDIDLYLRIAPELYLKRAVVGGIDRVFEINRNFRNEG 277

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI---FSFQNVNCNPFSEP 165
               H PEF MLE Y A   Y    +     I+  A           +          + 
Sbjct: 278 VDRSHSPEFAMLETYAAWGDYNDCARMTRESIQSVAREVFGSTTVTLADGTDFDFGGEQW 337

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA--HDDTWSDIFSRILI 223
             I +  +             +     D   L   A+  G+ V          +   I  
Sbjct: 338 PEIEMYPSLNEALQRKFPGQPEVTIDTDVETLKGIAKVIGLDVPQGEGWGHGKLVEEIWE 397

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
              E    +     +  +P   S L   + ++P  T++++LY    EL     EL+DP+ 
Sbjct: 398 VLCEDQ--LEGPIFVKNFPVETSPLTRQHRSEPGVTEKWDLYVRGFELATGYSELVDPVV 455

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE + +       E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E 
Sbjct: 456 QRERFEDQARLAAGGDEEAMVLDEDFLAAMEQGMPPTAGTGMGMDRLLMALTGLG-IRET 514

Query: 343 IWTPFSQSNQE 353
           +  P  +  Q+
Sbjct: 515 VLFPLVKPEQK 525


>gi|296454791|ref|YP_003661935.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301]
 gi|296184223|gb|ADH01105.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301]
          Length = 560

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 153/367 (41%), Gaps = 25/367 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR  F ++ F+E+++  
Sbjct: 199 LQPLPALHKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPM 258

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 259 LQTLHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 314

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ + +    +++  A                 +   E +
Sbjct: 315 VDATHAPEFTMVEAYQAYGTYDSIGQLVKELVQKTAMDVFGSHKVTLLDGTEYDFGGEWK 374

Query: 167 YITVAEAFARYANIDLGTTLDNPDQP--DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            I++ ++ +     +       PD P      L   A + G+     +    +   +   
Sbjct: 375 TISMYDSLSEALG-EQIVPNGGPDNPGTSVEHLGEIADKLGVERDDVENHGKLVEHLWEH 433

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E    +   T +  +P   S L   +   P   ++++LY    EL     EL DP+ Q
Sbjct: 434 FYEDK--LYEPTFVRDFPVETSPLVKGHRTKPGVVEKWDLYVRGFELATGYSELNDPVVQ 491

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I
Sbjct: 492 RERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETI 550

Query: 344 WTPFSQS 350
             P  + 
Sbjct: 551 TFPLVKP 557


>gi|328906696|gb|EGG26468.1| lysine--tRNA ligase [Propionibacterium sp. P08]
          Length = 510

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 84/364 (23%), Positives = 138/364 (37%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       +   RRR             +  R  I  ++R    E  F+EI++  
Sbjct: 159 LRPLPTLHKELSEETRVRRRYVDLVVREESRQMVRTRAAITRAVRRALDERGFLEIETPI 218

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +     + L+ + E   K+ +  G ++++     +RN  
Sbjct: 219 LQLVHGGAA-ARPFNTHL---NAFDLDMSLRIALELYLKRAMVGGTDRVYEMGRVFRNEG 274

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF+MLE Y +  +   + +   +II   A+  +           N   E  ++
Sbjct: 275 IDSSHSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADALDIHQIEAPKGTINLDGEWRWV 334

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  +      +         L   A +  I +        +   +  E +EP
Sbjct: 335 SV------YPGLSEKLGREVTLDTPLEELQAIAAEHEIEIDPSWEAGKVVMELFGELVEP 388

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YPA    LA  +  DPR  + ++L    +E      EL+DP+ QR   
Sbjct: 389 --DLINPTFVCDYPAIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSELVDPVIQREVL 446

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+         E   +DEDFL  L    P   G+ +G DRLVML T A  I E I  P 
Sbjct: 447 TKQSLAAAAGDLEAMQLDEDFLEALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFPL 505

Query: 348 SQSN 351
            +  
Sbjct: 506 LKPE 509


>gi|282890720|ref|ZP_06299240.1| hypothetical protein pah_c026o040 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499313|gb|EFB41612.1| hypothetical protein pah_c026o040 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 521

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 164/372 (44%), Gaps = 31/372 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              L R  I   +R++  +  F E+++ 
Sbjct: 160 LLPLPDKHAGLSDKEQRYRKRWLDLIANEHVKNTFLLRTQILRFVRKFLDDAHFTEVETP 219

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T+L   + + + ++++ S E S KKL+  G ++++     +RN 
Sbjct: 220 ILQSVYGGA-EARPFLTKL---NALDQEMFMRISLEPSLKKLIVGGIDRVYEIGKVFRNE 275

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCN 160
                H PEFT++E Y ++  Y+ +M  C N+    A               + Q +  +
Sbjct: 276 GIDRSHNPEFTLMEAYASYWDYKDMMVFCENLFEKMALHLYGTTEVPALSLETQQPIKID 335

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +  + +T+ E+   YA I+     D     +   + L ++    +     T   + + 
Sbjct: 336 FKAPWKRLTMKESLIEYAKINPDDLTDQ----EMREMLLASETCDPKKITPLTRGLLIAA 391

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +    +E +  +     +  +P   + L      +    +RFE +    E+CNA  EL D
Sbjct: 392 LFETFVEQH--LIQPHHITDHPIETAILCKPKANEEGLIERFESFVLGGEICNAYSELND 449

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC-LTEMPQSSGIAMGFDRLVMLVTGANNI 339
           P  QR  F+++ + +     E  P+DE+F+      MP + GI +G DRLVML+T  ++I
Sbjct: 450 PELQRKLFDEQSKRRDSGDEEASPVDEEFIEAIHQGMPPTGGIGIGIDRLVMLLTNEHSI 509

Query: 340 NEVIWTPFSQSN 351
            +V++ P+ +  
Sbjct: 510 RDVLYFPWMKPQ 521


>gi|222087705|ref|YP_002546242.1| lysyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221725153|gb|ACM28309.1| lysyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 354

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 190/342 (55%), Positives = 236/342 (69%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW R  H  RRPFLL RN IQ++LR +F  N FIE+D+ +LQ SPGNE H+ AF+TE
Sbjct: 8   ASPWWTRSVHADRRPFLLGRNAIQAALRGFFARNDFIEVDTSTLQVSPGNEAHLHAFATE 67

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            +  D    P YL TSPEF+CKKLLAAGEE+I CFAH +RN E+G LH PEFTMLEWYRA
Sbjct: 68  ALTTDGQAAPFYLHTSPEFACKKLLAAGEERIACFAHVYRNRERGPLHHPEFTMLEWYRA 127

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            E+YE LM DC  ++  AAE    K  +++    +PF  PE I+VA AF R+A IDL  +
Sbjct: 128 GETYETLMNDCAVLLALAAETVGAKKLTYRGAETDPFLAPERISVAAAFERHAGIDLLRS 187

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L  + ++ G+RVA DD W+D+FSR+L+EK+EP LG    TILD YP  E
Sbjct: 188 VGPDGSTDREHLAAEMRRVGMRVAADDHWADLFSRVLVEKVEPYLGFGRATILDEYPVSE 247

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA    AD R  +RFELYAC +EL NA  EL +  EQR RFE EM EK +IY ETYP+
Sbjct: 248 AALARPSAADHRVAERFELYACGVELANAFGELTNAQEQRRRFEIEMAEKARIYGETYPL 307

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DEDFL  L   P++SGIA+GFDRLVML TGA+ I +V+W P 
Sbjct: 308 DEDFLQALAVTPEASGIALGFDRLVMLATGASRIEQVLWAPV 349


>gi|146278437|ref|YP_001168596.1| lysine--tRNA ligase [Rhodobacter sphaeroides ATCC 17025]
 gi|145556678|gb|ABP71291.1| Lysine--tRNA ligase [Rhodobacter sphaeroides ATCC 17025]
          Length = 380

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 188/346 (54%), Positives = 231/346 (66%)

Query: 2   HQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
            ++ +  WW    H  RRP LL RN IQS++R++     F E+D  +LQ SPGNE H+  
Sbjct: 29  RRMSASSWWQPHRHADRRPLLLARNRIQSAIRDWLGAEGFTEVDPAALQVSPGNEAHLHG 88

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F T  I  D   + +YL TSPEF+ KKLLAAGE +I  FAH WRN E+G LH PEFTMLE
Sbjct: 89  FETSAIGNDGQGRRMYLHTSPEFAMKKLLAAGETRIAAFAHVWRNRERGVLHSPEFTMLE 148

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
           WYR  E YE LM+DC   +R AAE A  +   F++  C+PF+EPE ++VAEAF R+A ID
Sbjct: 149 WYRVGEDYEVLMEDCAAFLRLAAEAAGGRELRFRDRICDPFAEPERLSVAEAFLRHAGID 208

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           L  T+D    PD   L      AG+    DD WSD+ SR+L+EK+EP+LG    TILDRY
Sbjct: 209 LLATVDGQGVPDAAALRSAMAAAGLSAGEDDGWSDLLSRVLVEKVEPHLGHGRPTILDRY 268

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           PA E+ALA     DPR  +RFELYAC +EL N   EL DP EQR RFE EM EK+++Y E
Sbjct: 269 PAAEAALARRATDDPRVAERFELYACGVELANGFGELTDPAEQRRRFEAEMAEKERVYGE 328

Query: 302 TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           TYP+DE+FLA L  MP +SGIA+GFDRLVML TGA  I+EVIW P 
Sbjct: 329 TYPLDEEFLAALALMPPASGIALGFDRLVMLATGAPRIDEVIWAPV 374


>gi|223934542|ref|ZP_03626463.1| lysyl-tRNA synthetase [bacterium Ellin514]
 gi|223897005|gb|EEF63445.1| lysyl-tRNA synthetase [bacterium Ellin514]
          Length = 486

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 151/368 (41%), Gaps = 29/368 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +   P +     + +  YR+R              L R+ +   +R +F    ++E+++ 
Sbjct: 130 LRPPPEKWHGLVDTEIRYRQRYLDLMSNDEVKKTFLLRSAVVREIRNFFHSRGYVEVETP 189

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG       F T     + +    YL+ + E   K+LL  G +K+F     +RN 
Sbjct: 190 MMQNIPGGAAAA-PFVTH---HNALGCNFYLRIAIELYHKRLLVGGIDKMFEIGKNFRNE 245

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE Y+A+  YE +M+   ++I   AE     +           ++   
Sbjct: 246 GLSRKHNPEFTMLEAYQAYGDYETMMELVQSMIVHVAESVLGTLVIEHKDAEGKVTKTID 305

Query: 168 ITVAEAFARYANI---DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
           +T     A+Y ++     G    +    +R    ++  + G  +A      ++   +  +
Sbjct: 306 LTPNWRRAKYKDLVREKAGQDWFDVSPAERRRRAIEDLKLGGDIAAGYEDFEVTGAVFEK 365

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            IEP   +   T +   P     LA + P DP   + FE      E+  A  E  D +EQ
Sbjct: 366 LIEPT--LINPTFVTHLPKELVPLAKLSPEDPTSVEVFECCINGQEIAPAYSEQNDAVEQ 423

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R R E +         E   +DEDFL  L   MP + G+ MG DRL M++ G  +I +VI
Sbjct: 424 RERLEHQA------GGEQQKLDEDFLIALEHGMPPAGGMGMGIDRLCMMLLGQESIRDVI 477

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 478 LFPQMKPK 485


>gi|163758949|ref|ZP_02166036.1| putative lysyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162284239|gb|EDQ34523.1| putative lysyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 498

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 97/369 (26%), Positives = 163/369 (44%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I S +R +  ++ F+EI++ 
Sbjct: 142 LLPMPEKWHGLSDIELRYRKRHLDILSNADSKVRFQQRSKIVSGIRRFMEDDGFMEIETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            L    G  T    F T     + ++  ++L+ +PE   K+ L +G  +K+F     +RN
Sbjct: 202 MLHSVYGGAT-AEPFKTH---HNTLKLDMFLRIAPELYLKRALVSGLTDKVFEVNRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEP 165
                 H PEFTMLE Y A+  YE +M     +    A  +  +  F +     +     
Sbjct: 258 EGVSTRHNPEFTMLECYWAYADYEDIMDLVERLFETLALTIHGKTDFMYGETEFSFKGPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + + + +A      ID      +            A++AG  +  D TW +  + I  EK
Sbjct: 318 KRVPMPDAVKEATGIDFRAIDTD------EAARAAAKKAGFEIEDDWTWGECLAFIFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +     +  +P   S  A   P +PR  +RFE Y    EL NA  EL DP EQR
Sbjct: 372 VEPT--LIQPAHVTHFPKDISPFAKEVPGEPRLVERFETYCNTWELGNAFSELNDPEEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  +++++          +D++FL  +   MP + G+ +G DRLVML+T A +I +VI 
Sbjct: 430 KRMVEQLEQAHARGETDKRLDDEFLDAIDQGMPPAGGLGIGVDRLVMLLTDAPSIRDVIL 489

Query: 345 TPFSQSNQE 353
            P  ++  +
Sbjct: 490 FPARKTRAD 498


>gi|308175903|ref|YP_003915309.1| lysine-tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307743366|emb|CBT74338.1| lysine-tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 504

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 85/365 (23%), Positives = 147/365 (40%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPW-WNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R             + KR  I  ++R     + ++E+++  
Sbjct: 152 LRPLPVLHADLNEETRVRQRYADLIVRNEAREMVYKRAAIIRAVRNTLEGHDYVEVETPM 211

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  +  R F T L   +   + + ++ + E   K+ +  G +++F     +RN  
Sbjct: 212 LQLVHGGAS-ARPFKTHL---NAFDQEMTMRIALELYLKRAVVGGVDRVFEIGRIFRNEG 267

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEY 167
               H PEFTMLE Y A+     + +    +I  AA+     +     N   N   E  +
Sbjct: 268 VDSTHSPEFTMLECYEAYADQYVMAQRMQQMILNAADAIGAGRTIETANGTINLDGEWRW 327

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           ++V      Y  +     ++     D  +L   AQ+  +++        +   +  E +E
Sbjct: 328 LSV------YPGLSEAVGVEITPDTDASVLREIAQKHEVKIDPAWGAQKLVIELFGEIVE 381

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P   +   T +  YP     LA  + + P   + ++L    +E   A  EL+DP+ QR R
Sbjct: 382 PT--LIDPTFVCDYPPLAQPLARPHRSKPGVIEAWDLIIGGMERGTAFSELIDPVIQRER 439

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             ++         E   +DEDFL  L    P   GI +G DRLVML + A  I E I  P
Sbjct: 440 LTEQSLLAAGGDPEAMQLDEDFLRALEYGAPPMGGIGLGIDRLVMLFSNAG-IRETILFP 498

Query: 347 FSQSN 351
             +  
Sbjct: 499 LLKPE 503


>gi|297242836|ref|ZP_06926774.1| lysyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296889047|gb|EFH27781.1| lysyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 565

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRD-FHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+      D    R+           R  + +R+   +SLR  F  + F+E+++  
Sbjct: 212 LQPLPALHKELSDDTRTRKPYIGMIADEKIRDMVRRRSRAVASLRRTFDSHDFLEVETPM 271

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G E++F     +RN  
Sbjct: 272 LQTVHGGAA-ARPFTTHM---NAFDIDLYLRIAPELFLKRCLVGGIERVFEINRDFRNEG 327

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFS-EPE 166
               H PEFTMLE Y+A+ +Y+ +      +I + A +       +  N     F  E +
Sbjct: 328 VDATHAPEFTMLEAYQAYGTYDTIAALTKELIQKAALDAFGSTKVTLLNGEEYDFGGEWK 387

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+  + +     ++        +     L   A + G+     +    +   +     
Sbjct: 388 QITMYGSLSEALGEEITP------ETSVEHLGAIADKLGVERDEVENHGKLVEHLWEHFY 441

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L   +   P   ++++LY    EL     EL DP+ QR 
Sbjct: 442 EDK--LYAPTFVRDFPVETSPLVKGHRTKPGMVEKWDLYVRGFELATGYSELNDPVVQRE 499

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + ++      E   IDEDF+  L   MP + G+ MG DRL++ +TGA  I E I  
Sbjct: 500 RFVAQAKDALAGDVEAMDIDEDFIEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETITF 558

Query: 346 PFSQS 350
           P  + 
Sbjct: 559 PLVKP 563


>gi|240139758|ref|YP_002964235.1| putative lysyl-tRNA synthetase (poxA-like) [Methylobacterium
           extorquens AM1]
 gi|240009732|gb|ACS40958.1| putative lysyl-tRNA synthetase (poxA-like) [Methylobacterium
           extorquens AM1]
          Length = 352

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 189/346 (54%), Positives = 236/346 (68%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           S PWW+   H  RRP LL RN I +  R +F E  F+E+++ +LQ SPGNE H+ AF+TE
Sbjct: 5   SSPWWHPGLHADRRPLLLTRNRILAGFRAWFAERDFVEVEAAALQVSPGNEAHLSAFATE 64

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            I+ D  R+PLYL TSPEF+CKKLLAAGE ++F  AH +RN E+G LH PEFTMLEWYRA
Sbjct: 65  AILPDGAREPLYLHTSPEFACKKLLAAGEPRLFSLAHVFRNRERGALHHPEFTMLEWYRA 124

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            ESY+ LM+D   ++  AAE A  +  +F+    +PF+  E +T+AEAF RYA IDL  T
Sbjct: 125 GESYDALMQDGAALLALAAETAGVRRLTFRGREADPFAPFERLTLAEAFQRYAAIDLLAT 184

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L       G+RVA DDTW+D+FSR+L+  IEP+LG    TIL  YP  E
Sbjct: 185 VSPDGGTDRDTLADAVMTRGLRVAPDDTWADLFSRVLVGLIEPHLGQGRPTILCEYPVSE 244

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA   P DPR  +R ELYAC +EL NA  EL DP EQR RFE EM EK +IY E YPI
Sbjct: 245 AALARPSPRDPRVAERCELYACGVELANAFGELTDPAEQRRRFEAEMAEKARIYGERYPI 304

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           DE+FL  L  MP++SGIA+GFDRLVML TGA  I++VIWTP  ++ 
Sbjct: 305 DEEFLDALAVMPEASGIALGFDRLVMLATGAPRIDDVIWTPVPRNR 350


>gi|222087177|ref|YP_002545712.1| lysyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221724625|gb|ACM27781.1| lysyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 498

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 161/369 (43%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I S +R +  ++ F+E+++ 
Sbjct: 142 LLPMPEKWHGLSDIELRYRKRHLDIMTNEESKLRFQQRSRIVSGIRRFMEDDGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            L    G  T    F T     + ++  +YL+ +PE   K+ L +G  +K+F     +RN
Sbjct: 202 MLHSVYGGAT-AEPFKTH---HNTLKLDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A  +     F+F +   +     
Sbjct: 258 EGVSTRHNPEFTMMECYWAYADYEDIMDLVERLFSTLAMSIHGSTEFAFGDKQISFKGPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             + + +A      ID      + +              G  V  D TW +  + I  EK
Sbjct: 318 RRVPMPDAVKEATGIDFLALKTDEEARAAAKAA------GFTVEKDATWGECLAFIFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   + +  +P   S  A   P +PR  +RFE Y    EL NA  EL DP EQR
Sbjct: 372 VEGT--LIQPSHVTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDPEEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  +++++      +   +DE+FL  +   MP + G+ +G DRL+ML+T + +I ++I 
Sbjct: 430 ARMVEQLEQAHARGEKQKELDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNSPSIRDIIL 489

Query: 345 TPFSQSNQE 353
            P  ++  +
Sbjct: 490 FPARRAKAD 498


>gi|320459194|dbj|BAJ69815.1| lysyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 559

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 153/367 (41%), Gaps = 25/367 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR  F ++ F+E+++  
Sbjct: 199 LQPLPALHKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPM 258

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 259 LQTLHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 314

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ + +    +++  A                 +   E +
Sbjct: 315 VDATHAPEFTMVEAYQAYGTYDSIGQLVKELVQKTAMDVFGSHKVTLLDGTEYDFGGEWK 374

Query: 167 YITVAEAFARYANIDLGTTLDNPDQP--DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            I++ ++ +     +       PD P      L   A + G+     +    +   +   
Sbjct: 375 TISMYDSLSEALG-EQIVPNGGPDNPGTSVEHLGEIADKLGVERDDVENHGKLVEHLWEH 433

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E    +   T +  +P   S L   +   P   ++++LY    EL     EL DP+ Q
Sbjct: 434 FYEDK--LYEPTFVRDFPVETSPLVKGHRTKPGVVEKWDLYVRGFELATGYSELNDPVVQ 491

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I
Sbjct: 492 RERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETI 550

Query: 344 WTPFSQS 350
             P  + 
Sbjct: 551 TFPLVKP 557


>gi|218531179|ref|YP_002421995.1| tRNA synthetase class II (D K and N) [Methylobacterium
           chloromethanicum CM4]
 gi|218523482|gb|ACK84067.1| tRNA synthetase class II (D K and N) [Methylobacterium
           chloromethanicum CM4]
          Length = 352

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 189/346 (54%), Positives = 236/346 (68%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           S PWW+   H  RRP LL RN I +  R +F E  F+E+++ +LQ SPGNE H+ AF+TE
Sbjct: 5   SSPWWHPGLHADRRPLLLTRNRILAGFRAWFAERDFVEVEAAALQVSPGNEAHLSAFATE 64

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            I+ D  R+PLYL TSPEF+CKKLLAAGE ++F  AH +RN E+G LH PEFTMLEWYRA
Sbjct: 65  AILPDGAREPLYLHTSPEFACKKLLAAGEPRLFSLAHVFRNRERGALHHPEFTMLEWYRA 124

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            ESY+ LM+D   ++  AAE A  +  +F+    +PF   E +T+AEAF RYA IDL  T
Sbjct: 125 GESYDALMQDGAALLALAAETAGVRRLTFRGREADPFVPFERLTLAEAFQRYAAIDLLAT 184

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L       G+RVA DDTW+D+FSR+L+  IEP+LG    TIL  YP  E
Sbjct: 185 VSPDGGTDRDTLADAVMTRGLRVAPDDTWADLFSRVLVGLIEPHLGQGRPTILCEYPVSE 244

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA   P DPR  +RFELYAC +EL NA  EL DP EQR RFE EM EK ++Y E YPI
Sbjct: 245 AALARPSPRDPRVAERFELYACGVELANAFGELTDPAEQRRRFEAEMAEKARVYGERYPI 304

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           DE+FL  L  MP++SGIA+GFDRLVML TGA  I++VIWTP  ++ 
Sbjct: 305 DEEFLDALAIMPEASGIALGFDRLVMLATGAPRIDDVIWTPVPRNR 350


>gi|3582260|gb|AAC35210.1| lysyl-tRNA synthetase [Sinorhizobium meliloti]
          Length = 498

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 165/369 (44%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I SSLR +  +  F+E+++ 
Sbjct: 142 LLPMPEKYHGLADIETRYRKRYLDIMVNEESKLRFQQRSRIVSSLRRFLEDEGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            LQ   G  T    F T     + ++  +YL+ + E     +L +G  +K+F     +RN
Sbjct: 202 MLQPIYGGAT-AEPFKTH---HNTLKLDMYLRIAAELYLNAILVSGLTDKVFEINRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A     +  F F +   +     
Sbjct: 258 EGVSTRHNPEFTMMECYWAYADYEDVMGLVERMFETLALAVHGKTEFEFGDKQLSFKGPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +++       A+     ++  P + D       A+ AG+ +  D TW ++ + +  EK
Sbjct: 318 PRVSM-----PAASRTRPESISLPLKSDEE-ARQAARDAGVEIEKDATWGEVLAFLFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +     +  +P   S  A   P +PR  +RFE Y    E+ NA  EL DP+EQR
Sbjct: 372 VEAT--LIQPAHVIHFPKDISPFAKEVPGEPRLVERFETYCNGWEIGNAFSELNDPVEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  ++M++      +   +DEDFL  +   MP + G+ +G DRL+ML+T + +I ++I 
Sbjct: 430 ARMVEQMEQAHARGEKEKTLDEDFLDAMDQGMPPAGGLGIGVDRLIMLLTNSPSIRDIIL 489

Query: 345 TPFSQSNQE 353
            P  +   +
Sbjct: 490 FPARRQKAD 498


>gi|317482148|ref|ZP_07941171.1| lysyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916382|gb|EFV37781.1| lysyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 560

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 151/366 (41%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R     R+   +SLR  F ++ F+E+++  
Sbjct: 199 LQPLPALHKDLNEDTRTRKPYIGMIADENIRNMARNRSKAVASLRRTFDDHDFLEVETPM 258

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 259 LQTLHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 314

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ + +    +++  A                 +   E +
Sbjct: 315 VDATHAPEFTMVEAYQAYGTYDSIGQLVKELVQKTAMDVYGSHKVTLLDGTEYDFGGEWK 374

Query: 167 YITVAEAFARYANIDL-GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++      +        L   A + G+     +    +   +    
Sbjct: 375 TISMYDSLSESLGEEIVPNGGPDAPGTSVEHLGAIADKLGVERDDVENHGKLVEHLWEHF 434

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   +   P   ++++LY    EL     EL DPI QR
Sbjct: 435 YEDK--LYEPTFVRDFPVETSPLVKGHRTKPGVVEKWDLYVRGFELATGYSELNDPIVQR 492

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 493 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 551

Query: 345 TPFSQS 350
            P  + 
Sbjct: 552 FPLVKP 557


>gi|161598447|ref|YP_116617.2| lysyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 522

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 87/365 (23%), Positives = 144/365 (39%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWW-NRDFHYRRRPFL-----------LKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R                R  +  +LR       F+E+++  
Sbjct: 166 LRPLPVAHKEMNEESRVRQRYVDLIVRPEARQMARTRVAVVRALRNALERRGFLEVETPM 225

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G EK+F     +RN  
Sbjct: 226 LQTLHGGAA-ARPFVTHS---NALDMDLYLRIAPELFLKRCVVGGLEKVFEINRNFRNEG 281

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y A+ +Y+        +I+  A+ A               +E +  
Sbjct: 282 ADSTHSPEFAMLETYEAYGTYDDSATMIRELIQEVAQEALGTQVV----TLADGTEYDLR 337

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                   Y ++          +     L   A + G+ +  +  +     +++ E  E 
Sbjct: 338 GEWATVEMYPSLSAALGEPVTPETTVEELRAIAARVGLEIPEEKGYGH--GKLVEELWEH 395

Query: 229 NLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             G           +P   S L   + + P  T++++LY    EL     EL+DP+ QR 
Sbjct: 396 QYGDKLYAPTFVRDFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELVDPVIQRE 455

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +   +  +E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E I  
Sbjct: 456 RFVDQARLAAQGDDEAMVLDEDFLAAMEHGMPPTTGTGMGIDRLLMALTGLG-IRETILF 514

Query: 346 PFSQS 350
           P  + 
Sbjct: 515 PIVRP 519


>gi|119025394|ref|YP_909239.1| lysyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|118764978|dbj|BAF39157.1| lysyl-tRNA synthetase 1 [Bifidobacterium adolescentis ATCC 15703]
          Length = 587

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 84/366 (22%), Positives = 151/366 (41%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       D   R+           R  +  R+   +SLR+ F ++ F+E+++  
Sbjct: 227 LQPLPALHKELNEDTRTRKPYIGMIADEKIRNMVRNRSKAVASLRKTFADHDFLEVETPM 286

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 287 LQTVHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 342

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ +      +++  A                 +   E +
Sbjct: 343 VDATHAPEFTMVEAYQAYGNYDTIGALVKQLVQDTAMDVFGSHKVTLLDGTEYDFGGEWK 402

Query: 167 YITVAEAFARYANIDL-GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++      +        L   A + G+     +    +   +    
Sbjct: 403 TISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADKLGVERDDVENHGKLVEHLWEHF 462

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   + +     ++++LY    EL     EL DP+ QR
Sbjct: 463 YEDK--LYEPTFVRDFPVETSPLVKGHRSKAGVVEKWDLYVRGFELATGYSELNDPVVQR 520

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 521 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 579

Query: 345 TPFSQS 350
            P  + 
Sbjct: 580 FPLVKP 585


>gi|23336627|ref|ZP_00121835.1| COG1190: Lysyl-tRNA synthetase (class II) [Bifidobacterium longum
           DJO10A]
          Length = 414

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 152/366 (41%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR  F ++ F+E+++  
Sbjct: 53  LQPLPALHKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPM 112

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 113 LQTLHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 168

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ + +    +++  A                 +   E +
Sbjct: 169 VDATHAPEFTMVEAYQAYGTYDSIGQLVKELVQKTAMDVYGSHKVTLLDGTEYDFGGEWK 228

Query: 167 YITVAEAFARYANIDL-GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++      +        L   A + G+     +    +   +    
Sbjct: 229 TISMYDSLSESLGEEIVPNGGPDAPGTSVEHLGAIADKLGVERDDVENHGKLVEHLWEHF 288

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   +   P   ++++LY    EL     EL DPI QR
Sbjct: 289 YEDK--LYEPTFVRDFPVETSPLVKGHRTKPGVVEKWDLYVRGFELATGYSELNDPIVQR 346

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 347 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 405

Query: 345 TPFSQS 350
            P  + 
Sbjct: 406 FPLVKP 411


>gi|332717134|ref|YP_004444600.1| lysyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325063819|gb|ADY67509.1| lysyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 499

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 159/369 (43%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R              L+R+ I S +R +     F+E+++ 
Sbjct: 143 LLPMPEKWHGVSDIELRYRKRHLDILANEDSKLRFLQRSKILSGIRRFMEAEGFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            LQ   G  T    F T     + ++  +YL+ +PE   K+ L +G  +K+F     +RN
Sbjct: 203 MLQTVYGGAT-ADPFKT---FHNTLKMDMYLRIAPELFLKRTLVSGLSDKVFEINRNFRN 258

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A          FQ    +     
Sbjct: 259 EGVSTRHNPEFTMMECYWAYADYEDIMGLVERLFETLAIALHGTTEVEFQGQTISFKGPF 318

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + + + +A      ID      + +                 V  D TW +  + I  EK
Sbjct: 319 KRVPMPDAVKEATGIDFLAIKTDEEARAAAKAAGF------AVEKDWTWGECLAFIFEEK 372

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   + +  +P   S  A   P +PR  +RFE Y    E+ NA  EL DP EQR
Sbjct: 373 VEGT--LIQPSHVTHFPKDISPFAKEVPGEPRLVERFESYCNAWEVGNAFSELNDPEEQR 430

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  +++++      +   +D++FL  +   MP + G+ +G DRL+ML+T A +I +VI 
Sbjct: 431 RRMVEQLEQAHARGEKDKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDVIL 490

Query: 345 TPFSQSNQE 353
            P  ++  +
Sbjct: 491 FPARRNKAD 499


>gi|298253472|ref|ZP_06977264.1| lysyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532867|gb|EFH71753.1| lysyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 565

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRD-FHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+      D    R+           R  + +R+   +SLR  F  + F+E+++  
Sbjct: 212 LQPLPALHKELSDDTRTRKPYIGMIADEKIRDMVRRRSRAVASLRRTFDSHDFLEVETPM 271

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G E++F     +RN  
Sbjct: 272 LQTVHGGAA-ARPFTTHM---NAFDIDLYLRIAPELFLKRCLVGGIERVFEINRDFRNEG 327

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFS-EPE 166
               H PEFTMLE Y+A+ +Y+ +      +I + A +       +  N     F  E +
Sbjct: 328 VDATHAPEFTMLEAYQAYGTYDTIAALTKELIQKAAVDAFGSTKVTLLNGEEYDFGGEWK 387

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+  + +     ++        +     L   A + G+     +    +   +     
Sbjct: 388 QITMYGSLSEALGEEITP------ETSVEHLGAIADKLGVERDEVENHGKLVEHLWEHFY 441

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L   +   P   ++++LY    EL     EL DP+ QR 
Sbjct: 442 EDK--LYAPTFVRDFPVETSPLVKGHRTKPGMVEKWDLYVRGFELATGYSELNDPVVQRE 499

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + ++      E   IDEDF+  L   MP + G+ MG DRL++ +TGA  I E I  
Sbjct: 500 RFVAQAKDALAGDVEAMDIDEDFIEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETITF 558

Query: 346 PFSQS 350
           P  + 
Sbjct: 559 PLVKP 563


>gi|260578417|ref|ZP_05846331.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603439|gb|EEW16702.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 535

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 91/376 (24%), Positives = 150/376 (39%), Gaps = 30/376 (7%)

Query: 1   MHQIPSQPWW-NRDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R   L            R  +  +LR+Y     F+EI++  
Sbjct: 166 LRPLPVAFAEMNEETRVRQRYNDLIVREEARKNAMTRVKVIRALRDYMEGEGFVEIETPM 225

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 226 LQTLHGGAA-ARPFVTHS---NALDIDLYLRIAPELFLKRAVVGGIDRVFEINRNFRNEG 281

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA--NQKIFSFQNVNCNPFSEPE 166
               H PEF MLE Y A   Y+   +     I+   +       +     V     +E +
Sbjct: 282 VDKSHSPEFAMLETYAAWGDYDDCARTTRESIQYIVDQLTKGTDLEGTGKVRLADGTEFD 341

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDR------HLLYLQAQQAGIRVAH--DDTWSDIF 218
           +    +    Y +++       P QP+         L   A+  G+ V          + 
Sbjct: 342 FGGEWKEIEMYPSLNEALARKYPGQPEVTIDSTVEELQKIAKVIGLDVPAKGGWGHGKLV 401

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             I     E    +     +  +P   S L   + + P  T++++LY    EL     EL
Sbjct: 402 EEIWEVLCEDQ--LEGPIFVRNFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSEL 459

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
           +DP+ QR RFE + +      +E   +DEDFLA +   MP ++G  MG DRL+M +TG  
Sbjct: 460 VDPVIQRERFEDQARLAANGDDEAMRLDEDFLAAMEQGMPPTAGTGMGIDRLLMALTGLG 519

Query: 338 NINEVIWTPFSQSNQE 353
            I E +  P  +  +E
Sbjct: 520 -IRETVLFPIVKPERE 534


>gi|150398663|ref|YP_001329130.1| lysine--tRNA ligase [Sinorhizobium medicae WSM419]
 gi|150030178|gb|ABR62295.1| Lysine--tRNA ligase [Sinorhizobium medicae WSM419]
          Length = 350

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 197/345 (57%), Positives = 249/345 (72%), Gaps = 1/345 (0%)

Query: 4   IP-SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           +P + PWW RD H  RRPFL+ RN IQS+LR +F E  FIE+D+ +LQ SPGNE H+ AF
Sbjct: 1   MPHASPWWTRDVHADRRPFLIGRNRIQSALRRFFDERDFIEVDTAALQVSPGNEAHLHAF 60

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           +T+ +  D   +PLYL TSPEF+CKKL+AAGE +I CFAH +RN E+G LH PEFTMLEW
Sbjct: 61  ATQALGLDGSVQPLYLHTSPEFACKKLIAAGERRIACFAHVYRNRERGALHHPEFTMLEW 120

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YRA ESYE LM+DC  I+  AAE    +   +    C+PF+EPE ++VAEAF+R+A IDL
Sbjct: 121 YRAEESYETLMRDCAEILALAAETVAARSLVYGGRECDPFAEPERLSVAEAFSRFAGIDL 180

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             ++      DR  L    ++AG+RVA DD W+D+FSR+L+EKIEPNLG    TILD YP
Sbjct: 181 LGSIAKDGSTDRENLAAAMRKAGLRVARDDGWADLFSRVLVEKIEPNLGFGRATILDEYP 240

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
             E+ALA     DPR  +RFELYAC +EL NA  EL D  EQR RF  EM+EK ++Y ET
Sbjct: 241 VSEAALARRAARDPRVAERFELYACGVELANAFGELTDAAEQRRRFALEMEEKARVYGET 300

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           YPID+DFLA L+ MP++SGIA+GFDRLVML TGA+ I++V+W P 
Sbjct: 301 YPIDDDFLAALSSMPEASGIALGFDRLVMLATGASRIDQVLWAPV 345


>gi|581319|emb|CAA52877.1| putative lysyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 488

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 88/363 (24%), Positives = 154/363 (42%), Gaps = 27/363 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R+R              + R  I   +REYF    +IE+D+ 
Sbjct: 136 LKPLPDKFHGLVDPEERRRQRYVDLMMNEKTRNTFVMRTQIIKGIREYFDSLNYIEVDTP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     +   +  YL+ + E   KKL+  G ++++     +RN 
Sbjct: 196 ILNPMLGGAA-AKPFITFY---NATNRNFYLRIATELPLKKLIVGGLDRVYEIGRMFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+     +M+    + +      N K   F   +       + 
Sbjct: 252 GVDTTHNPEFTSIEFYEAYSDLWGMMERTEGVFKHLMNKFNIKEVKFNGFDMTFNFPFKR 311

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + +A +   N+D+          +   ++  A++ GI++     +  I + +  + +E
Sbjct: 312 VNMIDAMSEKINVDIRK-------LNEEQMFELAKKHGIKIEKFFRYGHIINELFEKYVE 364

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S  A I P D RFT R E +    E  N   EL DPI+Q  R
Sbjct: 365 ET--LMEPTFVYGHPIEISPTAAIDPDDKRFTTRAETFIGTKEFANMFTELNDPIDQLQR 422

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE ++ EK+    E   ID DF+  L   MP + G  MG DR +M +T  ++I +V+  P
Sbjct: 423 FENQLLEKENGNEEANEIDWDFVNALEYGMPPTGGSGMGIDRTIMTLTQNDSIRDVVLFP 482

Query: 347 FSQ 349
             +
Sbjct: 483 QLK 485


>gi|241206404|ref|YP_002977500.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860294|gb|ACS57961.1| lysyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 498

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 94/369 (25%), Positives = 159/369 (43%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R               +R+ I S +R +   + F+E+++ 
Sbjct: 142 LLPMPEKWHGLSDIELRYRKRHLDIMTNEDSKLRFQQRSKILSGIRRFMENDGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            L    G  T    F T     + ++  +YL+ +PE   K+ L +G  +K+F     +RN
Sbjct: 202 MLHSVYGGAT-AEPFKTH---HNTLKLDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A  +     F F +   +     
Sbjct: 258 EGVSTRHNPEFTMMECYWAYADYEDIMDLVERLFESLALSIHGATEFPFGDKTMSFKGPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + + + +A      ID      + +                 V  D TW +  + I  EK
Sbjct: 318 KRVPMPDAVKEATGIDFLAIKTDEEARAAAKAAGF------AVEKDWTWGECLAFIFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   + +  +P   S  A   P +PR  +RFE Y    EL NA  EL DP EQR
Sbjct: 372 VEST--LIQPSHVTHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDPEEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  +++++      +   +DE+FL  +   MP + G+ +G DRL+ML+T A +I +VI 
Sbjct: 430 RRMVEQLEQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDVIL 489

Query: 345 TPFSQSNQE 353
            P  ++  +
Sbjct: 490 FPARRNKAD 498


>gi|254562170|ref|YP_003069265.1| lysyl-tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254269448|emb|CAX25414.1| putative lysyl-tRNA synthetase (poxA-like) [Methylobacterium
           extorquens DM4]
          Length = 352

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 189/346 (54%), Positives = 237/346 (68%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           S PWW+   H  RRP LL RN I +  R +F E  F+E+++ +LQ SPGNE H+ AF+TE
Sbjct: 5   SSPWWHPGLHADRRPLLLTRNRILAGFRAWFAERDFVEVEAAALQVSPGNEAHLSAFATE 64

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            I+ D  R+PLYL TSPEF+CKKLLAAGE ++F  AH +RN E+G LH PEFTMLEWYRA
Sbjct: 65  AILPDGGREPLYLHTSPEFACKKLLAAGEPRLFSLAHVFRNRERGALHHPEFTMLEWYRA 124

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            ESY+ LM+D   ++  AAE A  +  +F+    +PF+  E +T+AEAF RYA IDL  T
Sbjct: 125 GESYDALMQDGAALLALAAETAGVRRLNFRGRETDPFAPFERLTLAEAFQRYAAIDLLAT 184

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L       G+RVA DDTW+D+FSR+L+  IEP+LG    TIL  YP  E
Sbjct: 185 VSPDGGTDRDTLADAVMTRGLRVAPDDTWADLFSRVLVGLIEPHLGQGRPTILCEYPVSE 244

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA   P DPR  +RFELYAC +EL NA  EL DP EQR RFE EM EK ++Y E YPI
Sbjct: 245 AALARPSPRDPRVAERFELYACGVELANAFGELTDPAEQRRRFEAEMAEKARVYGERYPI 304

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           DE+FL  L  MP++SGIA+GFDRLVML TGA  I++VIWTP  ++ 
Sbjct: 305 DEEFLDALAVMPEASGIALGFDRLVMLATGAPRIDDVIWTPVPRNR 350


>gi|33519727|ref|NP_878559.1| lysyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|39932112|sp|Q7VRF5|SYK_BLOFL RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|33504072|emb|CAD83333.1| lysyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 485

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 161/371 (43%), Gaps = 31/371 (8%)

Query: 1   MHQIPSQPWWNR--DFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    R  +  YR+R                R++I S +R +  ++ FIE+++ 
Sbjct: 126 LRSLPDKFHGLRNIETKYRQRYLDLIVNEESMKTFKIRSLIISEIRRFMHQHHFIEVETP 185

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + + PG     R F T     + +   +YL+ +PE   KKL+  G EKIF     +RN 
Sbjct: 186 MMHHIPGGA-LARPFVT---YHNKLNMNMYLRIAPELYLKKLIIGGFEKIFEINRNFRNE 241

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  ++     + R     +  + +  + + + +      
Sbjct: 242 SISPYHNPEFTMMEIYEAYVDYNNMIIFVQELFRTLTERILRKSVIEYGDYSLDFEKPFI 301

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +++ EA   Y        +D     D  +++   +   +   +  T   +   +  E +
Sbjct: 302 KMSIKEAIMYYLPDIRTKNID-----DILVVFDILKFFKVPSDNQWTLEKLHMVLFEEIV 356

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                I   T +  YP   S LA     + +   RFEL+    E+ N   EL DP +QR+
Sbjct: 357 SKK--IIQPTCITHYPIEVSPLARCSNDNAKIADRFELFIAGHEIGNGFSELNDPDDQRN 414

Query: 287 RFEKEMQEKK-----KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           RF K+  EK             P D+D++  L   +P ++G+ +G DRLVML+T  +NI 
Sbjct: 415 RFLKQATEKMINNDIDQDESNMPYDKDYIVALEYGLPPTAGVGIGIDRLVMLLTNKHNIR 474

Query: 341 EVIWTPFSQSN 351
           +VI  P  +S 
Sbjct: 475 DVILFPTLRSK 485


>gi|117927425|ref|YP_871976.1| lysyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117647888|gb|ABK51990.1| lysyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 501

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 90/366 (24%), Positives = 153/366 (41%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   RRR   L            R  +  SLR+      ++E+++ 
Sbjct: 149 LRPLPEKHKGLTDPEARIRRRYVDLIVNSRARSMVHIRAAVLRSLRDTLSRRGYLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T L   +    PLYL+ + E   K+L+  G E+++     +RN 
Sbjct: 209 VLQLVHGGAA-ARPFRTHL---NAFDLPLYLRIALELPLKRLVVGGLERVYEIGRVFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS-EPE 166
                H PEFT LE Y A+  Y+ +      ++  AA+  +       + +    +    
Sbjct: 265 GVDSSHSPEFTELEAYEAYGDYDTMADLVRELVLDAAKAIDAVQVLGSSGDVIDLAGPWR 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +TV +A +     ++             +L+  A +  + V       ++   +  +  
Sbjct: 325 TVTVHQAVSEAVGEEITVDTP------AAVLHQIAARYNVPVPPAAEHGEVVCELFEKVA 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           +P   I   T +  +PA    LA  +  DPR  + ++L    IEL  A  EL+DP+EQR 
Sbjct: 379 QP--AIVQPTFVRDFPASVRPLARPHRTDPRLAEAWDLIINGIELAPAYSELVDPVEQRR 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R  ++         E   +DEDFL  L    P   G+ +G DRL+ML+TG+  I +VI  
Sbjct: 437 RLTEQSVRAAGGDPEAMQLDEDFLQALEYGAPPMGGLGLGVDRLLMLLTGSG-IRDVILF 495

Query: 346 PFSQSN 351
           P  +  
Sbjct: 496 PLVRPE 501


>gi|184201564|ref|YP_001855771.1| lysyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581794|dbj|BAG30265.1| lysyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 510

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 83/364 (22%), Positives = 140/364 (38%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       +   R+R             +L R++I  ++R    +  ++EI++  
Sbjct: 160 LRPLPTMHKELNEETRVRQRYLDLIVRQEARDVVLTRSLITRTVRRVMEQQGYVEIETPM 219

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T L   +   + + L+ + E   K+ +  G +K+F     +RN  
Sbjct: 220 LQLVHGGAA-ARPFETHL---NAFDQDMTLRIATELYLKRAVVGGIDKVFEIGRVFRNEG 275

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT LE Y A+     +      II+  A     +           F E +++
Sbjct: 276 VDSSHSPEFTTLEAYEAYADQFDMADRIREIIQECARQLGVEGIDTPQGRIELFGEWQWV 335

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  +      +   +     L   A +  I V        +   +  E +EP
Sbjct: 336 SV------YPGLSEAVGREITPETPAEQLRAVAAERDIPVNPAWDAQKLVMELFEEIVEP 389

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP     LA  +   P   + ++L    +E   A  EL+DP+ QR R 
Sbjct: 390 T--LLQPTFVYDYPPAAQPLARPHREKPGVIEAWDLIIGGMERGTAFSELVDPVVQRERL 447

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++        +E   +DEDFL  L    P   G+ +G DRL+ML T    I E I  P 
Sbjct: 448 TEQSLLSAAGDHEAMQLDEDFLRALEHGAPPMGGMGLGLDRLIMLFTNLG-IRETILFPL 506

Query: 348 SQSN 351
            +  
Sbjct: 507 MKPE 510


>gi|154486811|ref|ZP_02028218.1| hypothetical protein BIFADO_00639 [Bifidobacterium adolescentis
           L2-32]
 gi|154084674|gb|EDN83719.1| hypothetical protein BIFADO_00639 [Bifidobacterium adolescentis
           L2-32]
          Length = 559

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 85/366 (23%), Positives = 152/366 (41%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR+ F ++ F+E+++  
Sbjct: 199 LQPLPALHKDLNEDTRTRKPYIGMIADEKIRNMVRNRSKAVASLRKTFADHDFLEVETPM 258

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 259 LQTVHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 314

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ +      +++  A                 +   E +
Sbjct: 315 VDATHAPEFTMVEAYQAYGNYDTIGALVKQLVQDTAMDVFGSHKVTLLDGTEYDFGGEWK 374

Query: 167 YITVAEAFARYANIDL-GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++      +        L   A + G+     +    +   +    
Sbjct: 375 TISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADKLGVERDDVENHGKLVEHLWEHF 434

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   + +     ++++LY    EL     EL DP+ QR
Sbjct: 435 YEDK--LYEPTFVRDFPVETSPLVKGHRSKAGVVEKWDLYVRGFELATGYSELNDPVVQR 492

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 493 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 551

Query: 345 TPFSQS 350
            P  + 
Sbjct: 552 FPLVKP 557


>gi|283782888|ref|YP_003373642.1| lysine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441095|gb|ADB13561.1| lysine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 565

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRD-FHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+      D    R+           R  + +R+   +SLR  F  + F+E+++  
Sbjct: 212 LQPLPALHKELSDDTRTRKPYIGMIADEKIRDMVRRRSRAVASLRRTFDSHDFLEVETPM 271

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G E++F     +RN  
Sbjct: 272 LQTVHGGAA-ARPFTTHM---NAFDIDLYLRIAPELFLKRCLVGGIERVFEINRDFRNEG 327

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFS-EPE 166
               H PEFTMLE Y+A+ +Y+ +      +I + A +       +  N     F  E +
Sbjct: 328 VDATHAPEFTMLEAYQAYGTYDTIAALTKELIQKAALDAFGSTKVTLLNGEEYDFGGEWK 387

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+  + +     ++        +     L   A + G+     +    +   +     
Sbjct: 388 QITMYGSLSEALGEEITP------ETSVEHLGAIADKLGVERDDVENHGKLVEHLWEHFY 441

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L   +   P   ++++LY    EL     EL DP+ QR 
Sbjct: 442 EDK--LYEPTFVRDFPVETSPLVKGHRTKPGMVEKWDLYVRGFELATGYSELNDPVVQRE 499

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + ++      E   IDEDF+  L   MP + G+ MG DRL++ +TGA  I E I  
Sbjct: 500 RFVAQAKDALAGDVEAMDIDEDFIEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETITF 558

Query: 346 PFSQS 350
           P  + 
Sbjct: 559 PLVKP 563


>gi|213693014|ref|YP_002323600.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213524475|gb|ACJ53222.1| lysyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 509

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 153/367 (41%), Gaps = 25/367 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR  F ++ F+E+++  
Sbjct: 149 LQPLPALHKDLNEDTRTRKPYIGMIADENIRNMVRNRSKAVASLRRTFDDHDFLEVETPM 208

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 209 LQTLHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 264

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ + +    +++  A                 +   E +
Sbjct: 265 VDATHAPEFTMVEAYQAYGTYDSIGQLVKELVQKTAMDVFGSHKVTLLDGTEYDFGGEWK 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQP--DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            I++ ++ +     +       PD P      L   A + G+     +    +   +   
Sbjct: 325 TISMYDSLSEALG-EQIVPNGGPDNPGTSVEHLGEIADKLGVERDDVENHGKLVEHLWEH 383

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E    +   T +  +P   S L   +   P   ++++LY    EL     EL DP+ Q
Sbjct: 384 FYEDK--LYEPTFVRDFPVETSPLVKGHRTKPGVVEKWDLYVRGFELATGYSELNDPVVQ 441

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I
Sbjct: 442 RERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETI 500

Query: 344 WTPFSQS 350
             P  + 
Sbjct: 501 TFPLVKP 507


>gi|311064831|ref|YP_003971557.1| lysyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
 gi|310867151|gb|ADP36520.1| LysS Lysyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 533

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 85/366 (23%), Positives = 151/366 (41%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR  F ++ F+E+++  
Sbjct: 171 LQPLPALHKDLNDDTRTRKPYIGMIADEKVRNMVRNRSKAVASLRRTFDDHDFLEVETPM 230

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 231 LQTIHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 286

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ + +    +++  A                 +   + +
Sbjct: 287 VDATHAPEFTMVEAYQAYGTYDTIGQLVKELVQKTAMDVFGSHKVTLLDGTEYDFGGDWK 346

Query: 167 YITVAEAFARYANIDL-GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++      +        L   A + G+     +    +   +    
Sbjct: 347 TISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADKLGVERDDVENHGKLVEHLWEHF 406

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   +       ++++LY    EL     EL DPI QR
Sbjct: 407 YEDK--LYEPTFVRDFPVETSPLVKGHRNKAGVVEKWDLYVRGFELATGYSELNDPIVQR 464

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 465 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 523

Query: 345 TPFSQS 350
            P  + 
Sbjct: 524 FPLVKP 529


>gi|213965141|ref|ZP_03393339.1| lysyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213952255|gb|EEB63639.1| lysyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 510

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 82/368 (22%), Positives = 138/368 (37%), Gaps = 24/368 (6%)

Query: 1   MHQIPSQP------------WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P               + +     + R   L R  +   LR       F+E+++  
Sbjct: 149 LRPLPVSFADLSEDSRVRHRYTDLIMREQARTNALTRIKVIRELRHALERRGFLEVETPM 208

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 209 LQTLHGGAA-ARPFVTHS---NALDIDLYLRIAPELYLKRCVVGGMERVFEINRNFRNEG 264

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF MLE+Y A  +Y+   +    +I+                    +   E +
Sbjct: 265 IDSSHSPEFAMLEYYEAFGTYDDSARTVREVIQEICVAVFGSTTVTLADGTEFDFGGEWK 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIE 224
            I +  +             +         L   A   G+ V          +   I   
Sbjct: 325 QIEMYPSLNEALARKFPGQPEVTIDSTVEELKAIADVIGLEVPEKGGWGHGKLVEEIWEL 384

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E    ++    +  +P   S L   + + P  T++++LY    EL     EL+DP+ Q
Sbjct: 385 LCEDQ--LDGPVFVRDFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELVDPVVQ 442

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RFE + +      +E   +DEDFL  +   MP ++G+ MG DRL+M +TG   I E +
Sbjct: 443 RERFEDQARLAAGGDDEAMVLDEDFLHAMEQGMPPTTGVGMGIDRLLMALTGLG-IRETV 501

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 502 LFPIVKPE 509


>gi|315503430|ref|YP_004082317.1| lysyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315410049|gb|ADU08166.1| lysyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 502

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 88/364 (24%), Positives = 147/364 (40%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R             +  R     SLR+      FIE+++  
Sbjct: 150 LRPLPVAHKPLSEESRVRQRYVDLVVRPQARQMVRTRATAVRSLRDTLHGQDFIEVETPM 209

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 210 LQLLHGGAA-ARPFVTHS---NALDTDLYLRIAPELFLKRAVVGGVDRVFEINRNFRNEG 265

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+  Y  + +   N+++ AA                   E +  
Sbjct: 266 IDSSHSPEFAMLEAYQAYGDYHTMAELTRNLVQQAAVAVAGSTVVTHAD----GREFDLG 321

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
               +   +  +      +   + +R  L   A + G+ V        +   +  E + P
Sbjct: 322 GEWRSVTLFGVLSEALGEEVTVRTERARLVEYADKVGLSVDPKWGPGKLAEELFEELVVP 381

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +  +   T +  YP   S L   + ++P   ++++LY    EL  A  EL+DP+ QR R 
Sbjct: 382 S--LRAPTFVMDYPEETSPLTRAHRSEPGLAEKWDLYVLGFELGTAYSELVDPVVQRERL 439

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + Q   +  +E   +DEDFL  +   MP S G+ MG DRL+M +TG   I E I  P 
Sbjct: 440 VAQAQLAARGDDEAMRLDEDFLRAMEYGMPPSGGMGMGIDRLLMALTGLG-IRETILFPL 498

Query: 348 SQSN 351
            +  
Sbjct: 499 VRPE 502


>gi|163852421|ref|YP_001640464.1| tRNA synthetase class II (D K and N) [Methylobacterium extorquens
           PA1]
 gi|163664026|gb|ABY31393.1| tRNA synthetase class II (D K and N) [Methylobacterium extorquens
           PA1]
          Length = 352

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 189/346 (54%), Positives = 237/346 (68%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           S PWW+   H  RRP LL RN I +  R +F E  F+E+++ +LQ SPGNE H+ AF+TE
Sbjct: 5   SSPWWHPGLHADRRPLLLTRNRILAGFRAWFAERDFVEVEAAALQVSPGNEAHLSAFATE 64

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            I+ D  R+PLYL TSPEF+CKKLLAAGE ++F  AH +RN E+G LH PEFTMLEWYRA
Sbjct: 65  AILPDGGREPLYLHTSPEFACKKLLAAGEPRLFSLAHVFRNRERGALHHPEFTMLEWYRA 124

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            ESY+ LM+D   ++  AAE A  +  +F+    +PF+  E +T+AEAF RYA IDL  T
Sbjct: 125 GESYDALMQDGAALLALAAETAGVRRLTFRGREADPFAPFERLTLAEAFQRYAAIDLLAT 184

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L       G+RVA DDTW+D+FSR+L+  IEP+LG    TIL  YP  E
Sbjct: 185 VSPDGGTDRDTLADAVMTRGLRVAPDDTWADLFSRVLVGLIEPHLGQGRPTILCEYPVSE 244

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA   P DPR  +RFELYAC +EL NA  EL DP EQR RFE EM EK ++Y E YPI
Sbjct: 245 AALARPSPRDPRVAERFELYACGVELANAFGELTDPAEQRRRFEAEMAEKARVYGERYPI 304

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           DE+FL  L  MP++SGIA+GFDRLVML TGA  I++VIWTP  ++ 
Sbjct: 305 DEEFLDALAIMPEASGIALGFDRLVMLATGAPRIDDVIWTPAPRNR 350


>gi|282853230|ref|ZP_06262567.1| lysine--tRNA ligase [Propionibacterium acnes J139]
 gi|282582683|gb|EFB88063.1| lysine--tRNA ligase [Propionibacterium acnes J139]
          Length = 510

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 83/364 (22%), Positives = 140/364 (38%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       +   RRR             +  R +I  ++R    E  F+EI++  
Sbjct: 159 LRPLPTLHKELSEETRVRRRYADLVVREESRQMVRTRALITRAVRRALDERGFLEIETPI 218

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +     + L+ + E   K+ +  G ++++     +RN  
Sbjct: 219 LQLVHGGAA-ARPFNTHL---NAFDIDMSLRIALELYLKRAMVGGTDRVYEMGRVFRNEG 274

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF+MLE Y +  +   + +   +II   A+  +           +   +  ++
Sbjct: 275 IDSSHSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADALDVHQIETPKGTIDLDGQWRWV 334

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  +      +         L   A +  I +        +   +  E +EP
Sbjct: 335 SV------YPGLSEKLGREVTLDTPLEELQAIAAEHEIEIDQSWEAGKVVMELFGELVEP 388

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YPA    LA  +  DPR  + ++L    +E      EL+DP+ QR   
Sbjct: 389 --GLINPTFVCDYPAIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSELVDPVIQREVL 446

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+         E   +DEDFL  L    P   G+ +G DRLVML T A  I E I  P 
Sbjct: 447 TKQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFPL 505

Query: 348 SQSN 351
            +  
Sbjct: 506 LKPE 509


>gi|16124973|ref|NP_419537.1| asparaginyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221233694|ref|YP_002516130.1| lysyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|13421947|gb|AAK22705.1| asparaginyl-tRNA synthetase, putative [Caulobacter crescentus CB15]
 gi|220962866|gb|ACL94222.1| lysyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 352

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 189/343 (55%), Positives = 230/343 (67%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFST 64
           P  PWW    H  RRPFLL RN I  + R +F    F E+++ +LQ SPGNE H+ AF+T
Sbjct: 8   PGAPWWRAGVHADRRPFLLARNRITKAFRAWFEVQGFEEVEAAALQVSPGNEAHLHAFAT 67

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
           + +       PLYL TSPEF+CKKLLAAGE KIF     WRN E+G LH PEFTMLEWYR
Sbjct: 68  QALTIAGEASPLYLHTSPEFACKKLLAAGENKIFSLGKVWRNRERGPLHHPEFTMLEWYR 127

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A   Y+ LM DC  ++  AAE A  + F+F+ + C+PF+ PE ++VAEAF R+A +DL  
Sbjct: 128 AAAPYQTLMDDCAVLLALAAETAGTQRFAFRGMTCDPFAAPERLSVAEAFQRHAGVDLLA 187

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
           ++      DR  L  QA+ AGIRVA DD W+DIFSRI++EK+EP LG    TIL  YP  
Sbjct: 188 SVAADGSTDRDALTAQARAAGIRVAEDDGWADIFSRIIVEKVEPRLGEGRATILCEYPIS 247

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           E+ALA    ADPR  +RFELYAC +EL NA  EL DP EQR RF  EM EK +IY E YP
Sbjct: 248 EAALARPKDADPRVAERFELYACGVELANAFGELTDPAEQRRRFLIEMDEKARIYGERYP 307

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           IDEDFLA L  MP +SG A+GFDRLV+L TGA  I +V+WTP 
Sbjct: 308 IDEDFLAALAHMPPASGSALGFDRLVLLATGARRIEDVVWTPV 350


>gi|229818183|ref|ZP_04448465.1| hypothetical protein BIFANG_03478 [Bifidobacterium angulatum DSM
           20098]
 gi|229784434|gb|EEP20548.1| hypothetical protein BIFANG_03478 [Bifidobacterium angulatum DSM
           20098]
          Length = 557

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 84/366 (22%), Positives = 151/366 (41%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       D   R+           R  +  R+   +SLR+ F ++ F+E+++  
Sbjct: 197 LQPLPALHKELNEDTRTRKPYIGMIADEKIRNMVRNRSKAVASLRKTFADHDFLEVETPM 256

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 257 LQTVHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 312

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ +      +++  A                 +   E +
Sbjct: 313 VDATHAPEFTMVEAYQAYGNYDTIGALVKQLVQDTAMDVFGSHKVTLLDGTEYDFGGEWK 372

Query: 167 YITVAEAFARYANIDL-GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++      +        L   A + G+     +    +   +    
Sbjct: 373 TISMYDSLSEALGEEIVPNGGPDSPGTSVEHLGEIADKLGVERDDVENHGKLVEHLWEHF 432

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   + +     ++++LY    EL     EL DP+ QR
Sbjct: 433 YEDK--LYEPTFVRDFPVETSPLVKGHRSKAGVVEKWDLYVRGFELATGYSELNDPVVQR 490

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 491 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 549

Query: 345 TPFSQS 350
            P  + 
Sbjct: 550 FPLVKP 555


>gi|269128677|ref|YP_003302047.1| lysyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268313635|gb|ACZ00010.1| lysyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 499

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 84/366 (22%), Positives = 142/366 (38%), Gaps = 29/366 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R R   L            R+    ++R+++ E  ++E+++ 
Sbjct: 146 LRPLPEKHAGLTDPEARVRLRYVDLIVNDEARRMAYLRSDTVRAVRDFWHEEGYLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T +   +     LYL+ + E   K+L+  G +K+F     +RN 
Sbjct: 206 MLQPIHGGAA-ARPFVTHI---NAYDMDLYLRIAIELYLKRLVVGGIDKVFEINRNFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF--SEP 165
                H PEFTMLE Y  +  Y  +      + + A + A                  E 
Sbjct: 262 GADSTHNPEFTMLEAYGTYLDYNDMAVLTQRMYQRAVQAALGTTVVVHKGQEVDLGLEEW 321

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             IT+  + +     ++              +   A    I          +   +  E 
Sbjct: 322 PRITLYGSVSEALGEEITPHTP------LEQVRKLADARQIAWDPKWGQGRLVQELFEEL 375

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S L   + ++P  T++++L     EL  A  EL+DPIEQR
Sbjct: 376 VEHT--LIQPTFVMDYPLETSPLTRQHRSEPLLTEKWDLIGFGTELGTAYSELIDPIEQR 433

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  ++         E   +DEDFL  L   MP + G+ +G DR++M  TG   I E I 
Sbjct: 434 RRLTEQSLLAAGGDPEAMQLDEDFLRALEYGMPPTGGVGVGIDRMIMAFTG-KGIRETIL 492

Query: 345 TPFSQS 350
            P  + 
Sbjct: 493 FPLVKP 498


>gi|313835252|gb|EFS72966.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314928489|gb|EFS92320.1| lysyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314970100|gb|EFT14198.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 494

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 84/364 (23%), Positives = 138/364 (37%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       +   RRR             +  R  I  ++R    E  F+EI++  
Sbjct: 143 LRPLPTLHKELSEETRVRRRYVDLVVREESRQMVRTRAAITRAVRRALDERGFLEIETPI 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +     + L+ + E   K+ +  G ++++     +RN  
Sbjct: 203 LQLVHGGAA-ARPFNTHL---NAFDLDMSLRIALELYLKRAMVGGTDRVYEMGRVFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF+MLE Y +  +   + +   +II   A+  +           N   E  ++
Sbjct: 259 IDSSHSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADALDIHQIEAPKGTINLDGEWRWV 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  +      +         L   A +  I +        +   +  E +EP
Sbjct: 319 SV------YPGLSEKLGREVTLDTPLEELQAIAAEHEIEIDPSWEAGKVVMELFGELVEP 372

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YPA    LA  +  DPR  + ++L    +E      EL+DP+ QR   
Sbjct: 373 --DLINPTFVCDYPAIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSELVDPVIQREVL 430

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+         E   +DEDFL  L    P   G+ +G DRLVML T A  I E I  P 
Sbjct: 431 TKQSLAAAAGDLEAMQLDEDFLEALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFPL 489

Query: 348 SQSN 351
            +  
Sbjct: 490 LKPE 493


>gi|289641085|ref|ZP_06473253.1| lysyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289509026|gb|EFD29957.1| lysyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 478

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 85/369 (23%), Positives = 155/369 (42%), Gaps = 28/369 (7%)

Query: 2   HQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +       +  YRRR                R      +R +  +N F+E+++  
Sbjct: 109 RALPDKWQGLSNVEARYRRRYLDLLVNDESRARFRTRTKAIQRIRRFLDDNDFLEVETPI 168

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ +       R F T     + + +  YL+ SPE   K+++    ++++     +RN  
Sbjct: 169 LQEAASGAA-ARPFVTH---HNALDEDFYLRISPETFLKRVVVGSFDRVYELGRNFRNEG 224

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEY 167
               H  EFTMLEWY A+  Y   M     +I    + V   +  +++ V  +  ++   
Sbjct: 225 MDSSHLQEFTMLEWYAAYWDYRDNMAFVRELILAVLDDVLGTRTVTYEGVKLDFGADWPE 284

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +      AR   IDL    D P       L  +    G+ V +  +++ +   +  + + 
Sbjct: 285 LDYRVEVARRTGIDLAVVRDLPT------LRERVAGLGLDVENAPSYAALVDLLYKKTVR 338

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P   +     L  +PA    LA     DP     F++     E+  A  EL+DP EQR R
Sbjct: 339 PE--LVQPCFLVHHPAELVPLARRSDDDPTRLDMFQVVVNGWEIVKAYSELVDPAEQRTR 396

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E++ + ++   +ET  ++EDF+  +   MP  SG+ +G DR   L+T A  + +V+  P
Sbjct: 397 LEEQAELREAGDDETMMLEEDFIEAMEYGMPPMSGLGLGIDRFTALLTDAPTLRDVVLFP 456

Query: 347 FSQ-SNQEE 354
             + + + +
Sbjct: 457 TMRGARKGQ 465


>gi|308235835|ref|ZP_07666572.1| lysyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114421|ref|YP_003985642.1| lysyl-tRNA synthetase [Gardnerella vaginalis ATCC 14019]
 gi|310945915|gb|ADP38619.1| lysyl-tRNA synthetase [Gardnerella vaginalis ATCC 14019]
          Length = 557

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 152/365 (41%), Gaps = 28/365 (7%)

Query: 1   MHQIPSQPWWNRD-FHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+      D    R+           R  + +R+   +SLR  F  + F+E+++  
Sbjct: 204 LQPLPALHKELSDDTRTRKPYIGMIADEKIRDMVRRRSHAVASLRRTFDSHDFLEVETPM 263

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 264 LQTVHGGAA-ARPFTTHM---NAFDIDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 319

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFS-EPE 166
               H PEFTMLE Y+A+ +Y+ +      +I + A +       +  N     F  E +
Sbjct: 320 VDATHAPEFTMLEAYQAYGTYDTIGALTKELIQKAAVDAFGSTKVTLLNGEEYDFGGEWK 379

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            IT+  + +     ++        +     L   A + G+     +    +   +     
Sbjct: 380 QITMYGSLSEALGEEITP------ETSVEHLGAIADKLGVERDEVENHGKLVEHLWEHFY 433

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S L   +   P   ++++LY    EL     EL DP+ QR 
Sbjct: 434 EDK--LYEPTFVRDFPVETSPLVKGHRTKPGMVEKWDLYVRGFELATGYSELNDPVVQRE 491

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + ++      E   IDEDF+  L   MP + G+ MG DRL++ +TGA  I E I  
Sbjct: 492 RFVAQAKDALAGDVEAMDIDEDFIEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETITF 550

Query: 346 PFSQS 350
           P  + 
Sbjct: 551 PLVKP 555


>gi|224283778|ref|ZP_03647100.1| lysyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|310287955|ref|YP_003939214.1| Lysyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|313140932|ref|ZP_07803125.1| lysyl-tRNA synthetase 1 [Bifidobacterium bifidum NCIMB 41171]
 gi|309251892|gb|ADO53640.1| Lysyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|313133442|gb|EFR51059.1| lysyl-tRNA synthetase 1 [Bifidobacterium bifidum NCIMB 41171]
          Length = 563

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 85/366 (23%), Positives = 150/366 (40%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR  F ++ F+E+++  
Sbjct: 201 LQPLPALHKDLNDDTRTRKPYIGMIADEKVRNMVRNRSKAVASLRRTFDDHDFLEVETPM 260

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 261 LQTIHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 316

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ + +    +++  A                 +     +
Sbjct: 317 VDATHAPEFTMVEAYQAYGTYDTIGQLVKELVQKTAMDVFGSHKVTLLDGTEYDFGGNWK 376

Query: 167 YITVAEAFARYANIDL-GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++      +        L   A + G+     +    +   +    
Sbjct: 377 TISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADKLGVERDDVENHGKLVEHLWEHF 436

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   +       ++++LY    EL     EL DPI QR
Sbjct: 437 YEDK--LYEPTFVRDFPVETSPLVKGHRNKAGVVEKWDLYVRGFELATGYSELNDPIVQR 494

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + ++      E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 495 ERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 553

Query: 345 TPFSQS 350
            P  + 
Sbjct: 554 FPLVKP 559


>gi|330443849|ref|YP_004376835.1| lysyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328806959|gb|AEB41132.1| lysyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 521

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 166/369 (44%), Gaps = 33/369 (8%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R              ++R+ I   +REY     ++E+++  LQ
Sbjct: 160 LPDKHAGLSDKEVRYRKRWLDLICSQEVSNVFVQRSRIIKLIREYMDSQGYLEVETPILQ 219

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G     R F+TEL   + +   ++L+ S E + KK+L  G  KI+     +RN    
Sbjct: 220 SIYGGA-EARPFTTEL---EALHTEMFLRISLEIALKKILVGGAPKIYEIGKVFRNEGID 275

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-------KIFSFQNVNCNPFS 163
             H PEFTM+E Y A+  Y  +M+   N++       N          +       +  +
Sbjct: 276 RTHNPEFTMIEAYTAYMDYHGVMEFVENLVEYVVRSLNHGSTVITYSHWKEGPQQVDFKA 335

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             + +T+ E+   Y  +D+    D   +          +++ I+ +     + +F  ++ 
Sbjct: 336 PWKRMTMKESIKEYGGVDVDLYGDAELREIVRTKTSLPEESFIKASRGALVALLFDELVS 395

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPI 282
           E       +     +  +P   + L     + DP + +RFE +    ELCNA  EL DPI
Sbjct: 396 E------NLIAPHHITDHPIETTPLCKSLRSGDPTYVERFESFCLGKELCNAYSELNDPI 449

Query: 283 EQRHRFEKEMQEKKKIYN-ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
            QR   E++   K++    E +PIDE+FL  L   MP S G  +G DRLVM++T + +I 
Sbjct: 450 VQRKLLEEQQLRKEQNPESECHPIDEEFLEALCQGMPPSGGFGIGIDRLVMILTDSASIR 509

Query: 341 EVIWTPFSQ 349
           +V++ P  +
Sbjct: 510 DVLYFPVMR 518


>gi|296139451|ref|YP_003646694.1| lysyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027585|gb|ADG78355.1| lysyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 1120

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 85/361 (23%), Positives = 138/361 (38%), Gaps = 20/361 (5%)

Query: 3    QIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY 51
              P     + +   R R             L +R+   +++R  F +  F E+++  LQ 
Sbjct: 766  PKPRVRLGD-ETRARSRSLDLMTDDGAVDLLYRRSRAVAAMRAAFTDRGFTEVETPMLQS 824

Query: 52   SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
              G     R F+T +   +     LYL+ +PE   K+L   G  +IF     +RN     
Sbjct: 825  VHGGAA-ARPFTTHI---NAYDMDLYLRIAPELYLKRLAVGGMGRIFEINRNFRNEGADA 880

Query: 112  LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
             H PEFT LE Y A+  Y  +      +I  AA   N +  + +        E +     
Sbjct: 881  THNPEFTSLEAYEAYGDYTTMRTLTREVILGAAIAVNGRPIAVRPDGSGGTREVDLTAEW 940

Query: 172  EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
                 +  +            +   L    +Q  +      +   +   +    +E    
Sbjct: 941  PVITVHEAVSRAVGTSVTPDSEVEELEALCKQWHVAAPRGASAGKLVMELYEGLVEKQTE 1000

Query: 232  INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                T    +P   S LA  +  DPR T++++L     EL  A  EL DPI+QR R  ++
Sbjct: 1001 F--PTFYCDFPIEVSPLARRHRRDPRLTEQWDLVGFGAELGTAYTELTDPIDQRERLTQQ 1058

Query: 292  MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                     E   +DE FL  L   MP + G+ +G DR++ML+ G  NI   +  PF + 
Sbjct: 1059 SMAAAAGDPEAMELDESFLDALSYAMPPTGGLGIGVDRIIMLLAGV-NIRATLAFPFIKP 1117

Query: 351  N 351
             
Sbjct: 1118 Q 1118


>gi|227834055|ref|YP_002835762.1| lysyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262183459|ref|ZP_06042880.1| lysyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227455071|gb|ACP33824.1| lysyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 524

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 89/369 (24%), Positives = 140/369 (37%), Gaps = 25/369 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R   L            R  +  +LR Y  +  F+EI++  
Sbjct: 162 LRPLPVSFADMNEETRVRQRYNDLIVREEARKNAMTRVKVMRALRNYLEDQGFMEIETPM 221

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 222 LQTLHGGAA-ARPFVTHS---NALDIDLYLRIAPELFLKRAVVGGIDRVFEINRNFRNEG 277

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPF--SEP 165
               H PEF MLE Y A   Y    +     I+  A         +  +     F   E 
Sbjct: 278 VDRSHSPEFAMLETYEAWGDYNDCARTIRESIQSVARAVFGSTTVTLADGTEYDFGGEEW 337

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILI 223
             I +  +             +         L   A   G+ V  +  W    +   I  
Sbjct: 338 PEIEMYPSLNEALQRKFPGQPEVTIDSTVEELKALADVIGLDVPKNGGWGHGKLVEEIWE 397

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
              E    +     +  +P   S L   + + P  T++++LY    EL     EL+DP+ 
Sbjct: 398 VLCEDQ--LEGPIFVKNFPVETSPLTRQHRSQPGVTEKWDLYVRGFELATGYSELVDPVI 455

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE + +       E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E 
Sbjct: 456 QRERFEDQARLAAGGDEEAMVLDEDFLAAMEQGMPPTAGAGMGMDRLLMALTGLG-IRET 514

Query: 343 IWTPFSQSN 351
           +  P  +  
Sbjct: 515 VLFPIVKPE 523


>gi|315122589|ref|YP_004063078.1| putative lysyl-tRNA synthetase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495991|gb|ADR52590.1| putative lysyl-tRNA synthetase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 352

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 275/343 (80%), Positives = 305/343 (88%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           S+ WWNRDFH+ RRPFL+KRNMIQ+SLREYF  N F+EIDSMSLQ SPGNETHI+AFSTE
Sbjct: 8   SKSWWNRDFHHHRRPFLIKRNMIQTSLREYFFNNNFVEIDSMSLQVSPGNETHIQAFSTE 67

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
           LI +DH RK +YLQTSPEFSCKKLLAAGEEKIFCFAH WRNGEQ  LHQPEFTMLEWYRA
Sbjct: 68  LITKDHTRKIMYLQTSPEFSCKKLLAAGEEKIFCFAHVWRNGEQDSLHQPEFTMLEWYRA 127

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
           HESYEQLM+DCM IIRCAAE A + +FSFQ + CNPFSE EYITV++AF RYA+IDL +T
Sbjct: 128 HESYEQLMQDCMEIIRCAAEKAKKSVFSFQGITCNPFSEAEYITVSDAFLRYAHIDLCST 187

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           LD+   P+R+LL LQAQ++GIRVA+DDTWSDIFSRIL+EKIEP+LG+N CTILDRYP PE
Sbjct: 188 LDHSSPPNRNLLALQAQKSGIRVANDDTWSDIFSRILVEKIEPHLGVNRCTILDRYPLPE 247

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           SALA +   DPRFT+RFELYACNIELCNA DEL+DPIEQRHRFEKEM EKKKIYNETYPI
Sbjct: 248 SALAKVCSDDPRFTQRFELYACNIELCNAFDELIDPIEQRHRFEKEMNEKKKIYNETYPI 307

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           DEDFLACL EMP SSGIAMGFDRLVML TGA N+NE+IWTPF 
Sbjct: 308 DEDFLACLKEMPSSSGIAMGFDRLVMLATGATNLNEIIWTPFV 350


>gi|306779639|ref|ZP_07417976.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu002]
 gi|308327440|gb|EFP16291.1| lysyl-tRNA synthetase 2 lysX [Mycobacterium tuberculosis SUMu002]
          Length = 727

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 150/371 (40%), Gaps = 28/371 (7%)

Query: 1   MHQIPSQPWW--NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P++     + +   R            R  +  R+ +  ++RE      F+E+++ 
Sbjct: 363 LRPLPNKWKGLLDPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETP 422

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G  T  R F T +   +     L+L+ +PE   K+L   G E++F    A+RN 
Sbjct: 423 ILQQLHGGAT-ARPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNE 478

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                H PEFT+LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +
Sbjct: 479 GVDFSHNPEFTLLEAYQAHADYLEWIDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRH 538

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                +   +      +  I                L      AG+          +   
Sbjct: 539 HLEPVDISGIWPVRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLE 598

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +    +E        T    +P   S L   + +     +R++L A  IEL  A  EL D
Sbjct: 599 LYEHLVE--CRTEQPTFYIDFPTSVSPLTRPHRSKRGVAERWDLVAWGIELGTAYSELTD 656

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P+EQR R +++         E   +DEDFL  +   MP + G+ MG DR+VML+TG  +I
Sbjct: 657 PVEQRRRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGIDRVVMLITG-RSI 715

Query: 340 NEVIWTPFSQS 350
            E +  P ++ 
Sbjct: 716 RETLPFPLAKP 726


>gi|226304130|ref|YP_002764088.1| lysyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229494517|ref|ZP_04388280.1| lysyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|226183245|dbj|BAH31349.1| lysyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229318879|gb|EEN84737.1| lysyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 503

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 146/365 (40%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQP------------WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P               + +       R    KR  +  +LR       F+E+++  
Sbjct: 147 LRPLPVAHKEMSEESRVRQRYADLIVRPEARDNARKRVAVVRALRNALESRGFLEVETPM 206

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G EK+F     +RN  
Sbjct: 207 LQTLHGGAA-ARPFVTHS---NALDIDLYLRIAPELFLKRCVVGGIEKVFEINRNFRNEG 262

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y A+ +Y+        +IR   +   Q+ F  Q +     SE +  
Sbjct: 263 VDSTHSPEFAMLETYEAYGTYDDS----AKMIRELVQEVAQEAFGTQVLTLADGSEYDVS 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +    Y ++      +         L   A++ G+ V  D  +     +++ E  E 
Sbjct: 319 GEWQVLEMYPSLSAAIGTEVTPDTTVDELLALAEKVGLEVPKDKGYGH--GKLVEELWEH 376

Query: 229 NLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             G           +P   S L   + +    T++++LY    EL     EL+DP+ QR 
Sbjct: 377 QCGDQLYVPTFVRDFPVETSPLTRDHRSKKGVTEKWDLYIRGFELATGYSELVDPVIQRE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +      +E   +DE+FLA +   MP ++G  MG DRL+M +TG   I E I  
Sbjct: 437 RFVDQARLASAGDDEAMVLDEEFLAAMEQGMPPTTGTGMGIDRLLMALTGLG-IRETILF 495

Query: 346 PFSQS 350
           P  + 
Sbjct: 496 PIVRP 500


>gi|326429846|gb|EGD75416.1| lysyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 498

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 92/351 (26%), Positives = 151/351 (43%), Gaps = 12/351 (3%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           Q+  +P      +   +  LL R+ +  +LR + V   F+E+++  L   PG  +  R F
Sbjct: 157 QLSERPLHML-VNQNFKNTLLVRSQVLQALRSFLVSRGFVEVETPILGSQPGGAS-ARPF 214

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
            T     + + +   L+ +PE   KKL+  G  ++F     +RN      H PEFT  E 
Sbjct: 215 WT---KSNALDRDYALRVAPELYLKKLVVGGLPRVFEIGKVFRNEGIDRTHNPEFTSCEL 271

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVA--NQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           Y+A+  +E+L     +++R   +       + +      +  +  + +   +   +    
Sbjct: 272 YQAYAPFEELFDLTEHLLRHVVQAVTGGSLVLNVHGTPVDLSAPFQRLAFVDTIEKATGT 331

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
            +         P   L  L  +Q GI      T + +  R+    IEP       T +  
Sbjct: 332 RVVDAHTGNVLPLPALADL-CEQHGISTDAPLTAASLLDRLAAHFIEPLCV--QPTFVYG 388

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P   S LA         + RFELY    E+ NA +EL DP EQR RF ++  E+    +
Sbjct: 389 HPTCLSPLAKQSQTQAGISDRFELYIDGKEIVNAYNELNDPDEQRSRFREQEAERAAGDD 448

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E    DEDF   L   +P + G  MG DRL+ML+T   NI +VI  P  ++
Sbjct: 449 EAQVPDEDFCRALEYGLPPTVGWGMGIDRLIMLLTDTGNIRDVIAFP-MKA 498


>gi|259505915|ref|ZP_05748817.1| lysine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|259166495|gb|EEW51049.1| lysine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 509

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 85/368 (23%), Positives = 143/368 (38%), Gaps = 24/368 (6%)

Query: 1   MHQIPS-----------QP-WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P            +  + +     + R   L R  +  +LR+Y     F+E+++  
Sbjct: 146 LRPLPVAFADMSEDTRVRHRYTDLIMREQARTNALTRIKVMRALRKYLEGEDFLEVETPM 205

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     +     LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 206 LQTLHGGAA-ARPFVTHS---NAFDLDLYLRIAPELFLKRCVVGGMERVFEVNRNFRNEG 261

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF+MLE Y+A  +YE   +    +++  A+                +   E +
Sbjct: 262 ADSTHSPEFSMLETYQAWGTYETGARLIQGLVQFVAQEVFGTTEVTLADGTTYDLGGEWK 321

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIE 224
            I +  +             +   +     L   A   G+ V          +   I   
Sbjct: 322 TIEMYPSLNEALQRKFPGQPEVTVESSVEELREIAAVIGLAVPEKGGWGHGKLVEEIWEL 381

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E    +     +  +P   S L   +   P  T++++LY    EL     EL+DP+ Q
Sbjct: 382 LCEDQ--LYGPIFVKDFPVETSPLTRQHRDKPGVTEKWDLYVRGFELATGYSELVDPVIQ 439

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RFE + +      +E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E +
Sbjct: 440 RERFEDQARLAAGGDDEAMVLDEDFLAAMEQGMPPTAGCGMGIDRLLMALTGLG-IRETV 498

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 499 LFPLVKPE 506


>gi|226363746|ref|YP_002781528.1| lysyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226242235|dbj|BAH52583.1| lysyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 503

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 86/365 (23%), Positives = 143/365 (39%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQP------------WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P               + +       R    KR  +   LR       F+E+++  
Sbjct: 147 LRPLPVAHKEMNEESRVRQRYADLIVRPEARDNARKRVSVVRELRNALERRGFLEVETPM 206

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G EK+F     +RN  
Sbjct: 207 LQTVAGGAA-ARPFITHS---NALDIDLYLRIAPELFLKRCVVGGIEKVFEINRNFRNEG 262

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y A+ +Y+        +++  A+ A               +E +  
Sbjct: 263 VDSTHSPEFAMLETYEAYGTYDDSAVMIRELVQEVAQAAFGSQVV----TLADGTEYDLS 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +    Y ++     +D         L   A++ G+ V  D  +     +++ E  E 
Sbjct: 319 GEWKTLEMYPSLSQAIGVDVTPDTTVEELLALAEKVGLEVPKDKGYGH--GKLVEELWEH 376

Query: 229 NLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             G           +P   S L   + +    T++++LY    EL     EL+DP+ QR 
Sbjct: 377 QCGDQLFEPTFVRDFPVETSPLTRDHRSKAGVTEKWDLYIRGFELATGYSELVDPVIQRE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +      +E   +DE+FLA +   MP ++G  MG DRL+M +TG   I E I  
Sbjct: 437 RFVDQARLASAGDDEAMALDEEFLAAMEQGMPPTTGTGMGIDRLLMALTGLG-IRETILF 495

Query: 346 PFSQS 350
           P  + 
Sbjct: 496 PIVRP 500


>gi|331699832|ref|YP_004336071.1| Lysyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326954521|gb|AEA28218.1| Lysyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 500

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 87/365 (23%), Positives = 146/365 (40%), Gaps = 28/365 (7%)

Query: 2   HQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
             +P       +               R R  +  R+ +  +LR  F E  +IE+++  L
Sbjct: 149 RPLPVAHRELSEETRVRQRYVDLIMRPRAREMVRARSTVLRTLRRVFEERGYIEVETPML 208

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G  T  R F T     + + + LYL+ +PE   K+ +  G E++F     +RN   
Sbjct: 209 QVLHGGAT-ARPFVTRS---NALSQDLYLRIAPELYLKRAVVGGIERVFELNRVFRNEGI 264

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--NCNPFSEPEY 167
              H PEF MLE Y+A+ +Y+ + +    +I  +A          +      +       
Sbjct: 265 DSTHSPEFAMLEAYQAYATYDDMAELTRELILESARAVFGSTVVRRADGSEHDLGVPWRS 324

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +T+  + A           +         L   A +  + +    +  +I   +  + +E
Sbjct: 325 VTLHASVAEAVG------REVTIDTSAETLRKIAAEHDVELKDSWSAGEIVLELFEKLVE 378

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP     L   +  DPR  + ++L     EL  A  EL+DP+EQR R
Sbjct: 379 HT--LVEPTFVRDYPVEVRPLTRQHRDDPRLAEAWDLIVFGTELATAYSELVDPVEQRER 436

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             ++         E   +DEDFL  +   MP + G+ MG DRL+M +TG   I E I  P
Sbjct: 437 LYRQSLLAAAGDPEAMQLDEDFLRAMEYGMPPTGGMGMGVDRLLMTLTGLG-IRETILFP 495

Query: 347 FSQSN 351
             +S 
Sbjct: 496 LVRSE 500


>gi|220921876|ref|YP_002497177.1| tRNA synthetase class II (D K and N) [Methylobacterium nodulans ORS
           2060]
 gi|219946482|gb|ACL56874.1| tRNA synthetase class II (D K and N) [Methylobacterium nodulans ORS
           2060]
          Length = 350

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 186/350 (53%), Positives = 232/350 (66%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
                PWW    H  RRP LL RN I+++LR +F +  F+E+D+ +LQ SPGNE H+ AF
Sbjct: 1   MTSVSPWWTPHVHADRRPRLLARNRIKAALRSWFSDRGFVEVDTAALQVSPGNEAHLSAF 60

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           +T  I  D    PLYL TSPEF+CKKLLAAGE ++  FA  +RN E+G LH PEFT+LEW
Sbjct: 61  ATRAIGPDGRGMPLYLHTSPEFACKKLLAAGERRLVSFAPVYRNRERGPLHHPEFTLLEW 120

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR  E Y  LM+DC  ++  AAE A    F F++   +  +EPE +TVAEAF R++ IDL
Sbjct: 121 YRVGEPYGVLMRDCAALLALAAETAGTDRFRFRDREADALAEPERLTVAEAFWRFSGIDL 180

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             T+      DR         AGIR A DDTW+D+FSR+L+E+IEP LG    TIL  YP
Sbjct: 181 LATVAADGTTDRAAFQAAVAGAGIRTAPDDTWADLFSRVLVERIEPELGQGRATILCEYP 240

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
            PE+ALA   P DPR  +RFELY C +EL NA  EL D  EQR RF  EM EK++IY E 
Sbjct: 241 IPEAALARPSPHDPRVAERFELYCCGVELANAFGELTDADEQRRRFMAEMDEKERIYGER 300

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           YP+DEDFLA L  MP++SGIA+GFDRLVML TGA  I EVIWTP +++ +
Sbjct: 301 YPLDEDFLAALARMPEASGIALGFDRLVMLATGARRIEEVIWTPVAEAPR 350


>gi|325293925|ref|YP_004279789.1| lysyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325061778|gb|ADY65469.1| lysyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 354

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 196/341 (57%), Positives = 238/341 (69%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
            PWW  D H  RRPFLL RN IQS  R YF    F+E+D+ +LQ SPGNE H+ AF+T+ 
Sbjct: 9   SPWWTPDVHADRRPFLLGRNAIQSEFRSYFARADFLEVDTATLQISPGNEAHLHAFATQG 68

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
           +       PLYL TSPEF+CKKLLAAGEE+IFCFAH +RN E+G LH PEFTMLEWYR  
Sbjct: 69  LTPAGDAAPLYLHTSPEFACKKLLAAGEERIFCFAHVYRNRERGPLHHPEFTMLEWYRVG 128

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
           E+YE LMKD  N++  AAE A    F+++  + +PF EPE ++VAEAF RYA IDL  T+
Sbjct: 129 ETYETLMKDSANLLALAAETAKTNNFTYRGRSVDPFLEPERLSVAEAFDRYAGIDLLATI 188

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           D   + D   L      AGIRVA DDTW+D+FSR+++E++EP LG    TILD YP  E+
Sbjct: 189 DRNGETDSRHLAASLTNAGIRVAKDDTWADMFSRVIVERVEPELGFGRATILDEYPTSEA 248

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA   P D R  +RFELYAC +EL NA  EL D  EQR RFE EM EK+++Y ETYP+D
Sbjct: 249 ALARKSPGDARVAERFELYACGVELANAFGELTDAAEQRRRFEMEMVEKQRVYGETYPLD 308

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           EDFLA L  MP +SGIA+GFDRLVML TGA  I+ V+W P 
Sbjct: 309 EDFLAALAIMPPASGIALGFDRLVMLATGAPRIDLVMWAPV 349


>gi|254781118|ref|YP_003065531.1| lysyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040795|gb|ACT57591.1| lysyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 502

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 166/365 (45%), Gaps = 29/365 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ IP   +   D    YR+R               +R+++ S +R +  +  F+E+++ 
Sbjct: 142 LNSIPETYYGLSDVEIRYRKRYLDIISNSDSKIRFQQRSLLISQIRHFMEKKGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            LQ   G  T    F T     + ++  +YL+ +PE   K++L +G  +++F     +RN
Sbjct: 202 ILQPIYGGAT-ADPFKTH---HNILKADMYLRIAPELYLKRVLISGLTDQVFELNRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  Y  +MK   ++    A+         F     +  +  
Sbjct: 258 EGVSSRHNPEFTMIEAYWAYTDYRDMMKLVEDLCHNLAKTLHGTTDIPFGEKVISFKAPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
              ++ +       +D                 + AQ  GI V +D  W ++   I  EK
Sbjct: 318 ACKSMLQLVKEATGLD------FMLLKSDQEARVAAQSIGITVENDALWGEVMMTIFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           IE N  I   T +  +P   S  A     + R  +RFE Y    E+CNA  EL DP+EQR
Sbjct: 372 IEKN--IVNPTHITDFPKDISPFAKEVAGEKRLVERFETYCNGWEICNAFSELNDPVEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R E+++++  +   E   +DEDFL  +   MP +SG+ +G DRL+ML+T A +I +VI 
Sbjct: 430 IRMEQQVEQSHQRG-EHTILDEDFLDAMTYGMPPASGLGLGIDRLIMLLTNAPSIRDVIL 488

Query: 345 TPFSQ 349
            P  +
Sbjct: 489 FPAQR 493


>gi|218663109|ref|ZP_03519039.1| lysyl-tRNA synthetase protein [Rhizobium etli IE4771]
          Length = 498

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 159/369 (43%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +   + D    YR+R               +R+ I S +R +   + F+E+++ 
Sbjct: 142 LLPMPEKWHGHSDIELRYRKRHLDIMTNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            LQ   G  T    F T     + ++  +YL+ +PE   K+ L +G  +K+F     +RN
Sbjct: 202 MLQSIYGGAT-AEPFKTH---HNTLKLDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A  +     F F +   +     
Sbjct: 258 EGVSTRHNPEFTMMECYWAYADYEDMMDLVERLFETLALYIHGTTEFDFGDKRLSFKGPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + + +  A      ID      + +                 V  D TW +  + I  EK
Sbjct: 318 KRVPMPAAVEEATGIDFLAIKTDEEARAAAKAAGF------AVEKDWTWGECLAFIFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   + +  +P   S  A   P +PR  +RFE Y    EL NA  EL DP EQR
Sbjct: 372 VEAT--LIQPSHVIHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFSELNDPEEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  +++++          +DE+FL  +   MP + G+ +G DRL+ML+T A +I +VI 
Sbjct: 430 RRMVEQLEQAHARGENDKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDVIL 489

Query: 345 TPFSQSNQE 353
            P  +S  +
Sbjct: 490 FPARRSKAD 498


>gi|222149832|ref|YP_002550789.1| lysyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221736814|gb|ACM37777.1| lysyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 498

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 92/369 (24%), Positives = 163/369 (44%), Gaps = 28/369 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R               +R+ I S +R +   + F+E+++ 
Sbjct: 142 LLPMPEKYHGVTDIEVRYRKRHLDILTNDESKLRFQQRSKIVSGIRRFMESDGFMEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRN 106
            LQ   G  +    F T     + +++ +YL+ +PE   K+ L +G  +KIF     +RN
Sbjct: 202 MLQSVYGGAS-ADPFKTH---HNTLKQDMYLRIAPELFLKRTLVSGLADKIFEINRNFRN 257

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEP 165
                 H PEFTM+E Y A+  YE +M     +    A  +     F+F +   +     
Sbjct: 258 EGVSTRHNPEFTMMECYWAYADYEDVMDLVERLFADLAMRIHGSTEFAFGDKEISFKGPF 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + + + +A      ID      + +                 V  D TW +  S I  EK
Sbjct: 318 KRVPMPDAVKEVTGIDFLAIKTDEEARAAAKAAGF------AVEKDWTWGECLSFIFEEK 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   + +  +P   S  A   P +PR  +RFE Y    E+ NA  EL DP EQR
Sbjct: 372 VEGT--LIQPSHVTHFPKDISPFAKEVPGEPRLVERFETYCNAWEIGNAFSELNDPEEQR 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R  +++++      +   +D++FL  +   MP + G+ +G DRL+ML+T A +I ++I 
Sbjct: 430 KRMVEQLEQAHARGEKDKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDIIL 489

Query: 345 TPFSQSNQE 353
            P  ++  +
Sbjct: 490 FPARRAKVD 498


>gi|54013883|dbj|BAD55253.1| putative lysyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 488

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 87/365 (23%), Positives = 144/365 (39%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWW-NRDFHYRRRPFL-----------LKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R                R  +  +LR       F+E+++  
Sbjct: 132 LRPLPVAHKEMNEESRVRQRYVDLIVRPEARQMARTRVAVVRALRNALERRGFLEVETPM 191

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G EK+F     +RN  
Sbjct: 192 LQTLHGGAA-ARPFVTHS---NALDMDLYLRIAPELFLKRCVVGGLEKVFEINRNFRNEG 247

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y A+ +Y+        +I+  A+ A               +E +  
Sbjct: 248 ADSTHSPEFAMLETYEAYGTYDDSATMIRELIQEVAQEALGTQVV----TLADGTEYDLR 303

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                   Y ++          +     L   A + G+ +  +  +     +++ E  E 
Sbjct: 304 GEWATVEMYPSLSAALGEPVTPETTVEELRAIAARVGLEIPEEKGYGH--GKLVEELWEH 361

Query: 229 NLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             G           +P   S L   + + P  T++++LY    EL     EL+DP+ QR 
Sbjct: 362 QYGDKLYAPTFVRDFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELVDPVIQRE 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +   +  +E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E I  
Sbjct: 422 RFVDQARLAAQGDDEAMVLDEDFLAAMEHGMPPTTGTGMGIDRLLMALTGLG-IRETILF 480

Query: 346 PFSQS 350
           P  + 
Sbjct: 481 PIVRP 485


>gi|314922522|gb|EFS86353.1| lysyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314965597|gb|EFT09696.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
 gi|314982761|gb|EFT26853.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315091413|gb|EFT63389.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315094348|gb|EFT66324.1| lysyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315105074|gb|EFT77050.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327329142|gb|EGE70902.1| lysine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 494

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 83/364 (22%), Positives = 140/364 (38%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       +   RRR             +  R +I  ++R    E  F+EI++  
Sbjct: 143 LRPLPTLHKELSEETRVRRRYADLVVREESRQMVRTRALITRAVRRALDERGFLEIETPI 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +     + L+ + E   K+ +  G ++++     +RN  
Sbjct: 203 LQLVHGGAA-ARPFNTHL---NAFDIDMSLRIALELYLKRAMVGGTDRVYEMGRVFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF+MLE Y +  +   + +   +II   A+  +           +   +  ++
Sbjct: 259 IDSSHSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADALDVHQIETPKGTIDLDGQWRWV 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  +      +         L   A +  I +        +   +  E +EP
Sbjct: 319 SV------YPGLSEKLGREVTLDTPLEELQAIAAEHEIEIDQSWEAGKVVMELFGELVEP 372

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YPA    LA  +  DPR  + ++L    +E      EL+DP+ QR   
Sbjct: 373 --GLINPTFVCDYPAIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSELVDPVIQREVL 430

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+         E   +DEDFL  L    P   G+ +G DRLVML T A  I E I  P 
Sbjct: 431 TKQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFPL 489

Query: 348 SQSN 351
            +  
Sbjct: 490 LKPE 493


>gi|291303742|ref|YP_003515020.1| lysyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290572962|gb|ADD45927.1| lysyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 501

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 83/366 (22%), Positives = 148/366 (40%), Gaps = 28/366 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R   L            R  +  +LR+   +  F+E+++  
Sbjct: 149 LRPLPVAHKPMSEETRVRQRYVDLIMRPEARDTARNRAAVVHTLRDIMHQRDFMEVETPV 208

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ       + R F+T     + I   +YL+ + E   K+ +  G +++F  +  +RN  
Sbjct: 209 LQAIASGA-NARPFTTHF---NAINMDVYLRIALELYLKRCVVGGIDRVFEISRNFRNEG 264

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ--KIFSFQNVNCNPFSEPE 166
               H PEF+M+E Y A+  Y  + +   +++   AE       +            E  
Sbjct: 265 ADSTHSPEFSMMEAYEAYGDYRSIGRLTRDLVVGCAESVFGSTTVTHADGTELEFGGEWR 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+  A +      +              L   A++  + V        +   +    +
Sbjct: 325 EVTLFGALSEALGEPVSIETPY------DRLVAFAEKTDLEVNPVWGPGKLAEELFEHLV 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  YP   S L   +   P  T++++LY   +EL     EL+DP+ QR 
Sbjct: 379 TDT--LVNPTFVLDYPEETSPLTAAHRDTPGLTEKWDLYVRGVELATGYSELIDPVVQRE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ +   K  +E   +DEDFL  +   MP + G+ MG DRL+M +TG   I E I  
Sbjct: 437 RFEQQARLAAKGDDEAMKLDEDFLRAMEYGMPPTGGMGMGIDRLLMALTGLG-IRETILF 495

Query: 346 PFSQSN 351
           PF +  
Sbjct: 496 PFVKPE 501


>gi|332558922|ref|ZP_08413244.1| lysine--tRNA ligase [Rhodobacter sphaeroides WS8N]
 gi|332276634|gb|EGJ21949.1| lysine--tRNA ligase [Rhodobacter sphaeroides WS8N]
          Length = 345

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 189/343 (55%), Positives = 231/343 (67%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + +  WW    H  RRP LL RN IQS++R +     F+E+D  +LQ SPGNE H+  F+
Sbjct: 1   MSASSWWQPHRHADRRPLLLARNRIQSAIRGWLGAEGFVEVDPAALQVSPGNEAHLHGFA 60

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           TE I  D   + +YL TSPEF+ KKLLAAGE +I  F+H WRN E+G LH PEFTMLEWY
Sbjct: 61  TEAIGNDGQGRRMYLHTSPEFAMKKLLAAGETRIAAFSHVWRNRERGVLHSPEFTMLEWY 120

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           R  E YE LM DC   +R AAE A  +   F++  C+PF+ PE ++VAEAFAR+A IDL 
Sbjct: 121 RVGEGYEVLMADCAAFLRLAAEAAGARELRFRDRTCDPFAAPERLSVAEAFARHAGIDLL 180

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
            T+D    PD   L     QAG+    DD WSD+ SR+L+EK+EP+LG    TILDRYPA
Sbjct: 181 ATVDAQGLPDAEALRRAMAQAGLTAGADDGWSDMLSRVLVEKVEPHLGHGRPTILDRYPA 240

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
            E+ALA   P D R  +RFELYAC +EL N   EL DP EQR RFE EM EK+++Y ETY
Sbjct: 241 AEAALARRAPDDARVAERFELYACGVELANGFGELTDPAEQRRRFEAEMAEKERVYGETY 300

Query: 304 PIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P+DE+FL  L  MP +SGIAMGFDRLVML TGA  I+EVIW P
Sbjct: 301 PLDEEFLEALALMPPASGIAMGFDRLVMLATGAPRIDEVIWAP 343


>gi|302870294|ref|YP_003838931.1| lysyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302573153|gb|ADL49355.1| lysyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 502

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 87/364 (23%), Positives = 146/364 (40%), Gaps = 24/364 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R             +  R     SLR+      FIE+++  
Sbjct: 150 LRPLPVAHKPLSEESRVRQRYVDLVVRPQARQMVRTRATAVRSLRDTLHGQDFIEVETPM 209

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 210 LQLLHGGAA-ARPFVTHS---NALDTDLYLRIAPELFLKRAVVGGVDRVFEINRNFRNEG 265

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+  Y  + +   N+++ AA                   E +  
Sbjct: 266 IDSSHSPEFAMLEAYQAYGDYHTMAELTRNLVQQAAVAVAGSTVVTHAD----GREFDLG 321

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
               + + +  +          + +R  L   A + G+ V        +   +  E + P
Sbjct: 322 GEWRSVSLFGVLSEALGEQVTVRTERARLVEYADKVGLSVDPKWGPGKLAEELFEELVVP 381

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +  +   T +  YP   S L   + ++P   ++++LY    EL  A  EL+DP+ QR R 
Sbjct: 382 S--LRAPTFVMDYPEETSPLTRAHRSEPGLAEKWDLYVLGFELGTAYSELVDPVVQRERL 439

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + Q   +  +E   +DEDFL  +   MP S G+ MG DRL+M + G   I E I  P 
Sbjct: 440 VAQAQLAARGDDEAMRLDEDFLRAMEYGMPPSGGMGMGIDRLLMALAGLG-IRETILFPL 498

Query: 348 SQSN 351
            +  
Sbjct: 499 VRPE 502


>gi|50841670|ref|YP_054897.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289424611|ref|ZP_06426394.1| lysine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289428873|ref|ZP_06430553.1| lysine--tRNA ligase [Propionibacterium acnes J165]
 gi|295129747|ref|YP_003580410.1| lysine--tRNA ligase [Propionibacterium acnes SK137]
 gi|50839272|gb|AAT81939.1| lysyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|289155308|gb|EFD03990.1| lysine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289157874|gb|EFD06097.1| lysine--tRNA ligase [Propionibacterium acnes J165]
 gi|291375112|gb|ADD98966.1| lysine--tRNA ligase [Propionibacterium acnes SK137]
 gi|332674584|gb|AEE71400.1| lysine--tRNA ligase [Propionibacterium acnes 266]
          Length = 510

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 83/364 (22%), Positives = 140/364 (38%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       +   RRR             +  R +I  ++R    E  F+EI++  
Sbjct: 159 LRPLPTLHKELSEESRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPI 218

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +     + L+ + E   K+ +  G ++++     +RN  
Sbjct: 219 LQLVHGGAA-ARPFNTHL---NAFDIDMSLRIALELYLKRTMVGGTDRVYEMGRVFRNEG 274

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF+MLE Y +  +   + +   +II   A+  +           +   +  ++
Sbjct: 275 IDSSHSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADALDVHQIETPKGTIDLDGQWRWV 334

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  +      +         L   A +  I +        +   +  E +EP
Sbjct: 335 SV------YPGLSEKLGREVTLDTPLEELQSIAAEHEIEIDQSWEAGKVVMELFGELVEP 388

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YPA    LA  +  DPR  + ++L    +E      EL+DP+ QR   
Sbjct: 389 --GLINPTFVCDYPAIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSELVDPVIQREVL 446

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+         E   +DEDFL  L    P   G+ +G DRLVML T A  I E I  P 
Sbjct: 447 TKQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFPL 505

Query: 348 SQSN 351
            +  
Sbjct: 506 LKPE 509


>gi|271964174|ref|YP_003338370.1| lysyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270507349|gb|ACZ85627.1| Lysyl-tRNA synthetase (class II)-like protein [Streptosporangium
            roseum DSM 43021]
          Length = 1098

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 90/366 (24%), Positives = 146/366 (39%), Gaps = 28/366 (7%)

Query: 1    MHQIPSQPWWNR--DFHY-RR----------RPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +   P +       +    RR          R  L  R  +   LR+  V   F+E+++ 
Sbjct: 745  LRPPPGRRRGAPGQETRAGRRHPGPVTDPEARETLRIRGAVLHGLRDSLVRRGFLEVETP 804

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G     R F T +   +     LYL+ +PE   K+L   G E++F     +RN 
Sbjct: 805  ILQPVHGGA-CARPFVTHM---NAYDMRLYLRIAPELHLKRLCVGGAERVFELGRTFRNE 860

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                 H PEFTMLE Y+A+  Y  +++    +++ AA  A    +        +      
Sbjct: 861  GVSYKHNPEFTMLEAYQAYADYRTMLELARELVQEAAIAAFGAPVIRRHGQEIDISGVWR 920

Query: 167  YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             + V EA +  A                  L   A +  +          +   +    +
Sbjct: 921  TVGVNEAVSEAAG------EQVTVDTSVQELRKLADRLAVPYHPRWGRGAMLLELYERLV 974

Query: 227  EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
            E             +P+  S L   +  DPR  +R++L A  +EL  A  EL+DP+EQR 
Sbjct: 975  EERTA--GPVFYTDFPSEVSPLTRPHRQDPRLAERWDLVAYGVELGTAYSELVDPVEQRR 1032

Query: 287  RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            R  ++         E   +DEDFL  L   MP + G+ +G DRL+ML+TG  +I + +  
Sbjct: 1033 RLTEQSLLAAAGDPEAMELDEDFLRTLEYAMPPTGGLGIGVDRLIMLLTG-KSIRQTLSF 1091

Query: 346  PFSQSN 351
            P ++  
Sbjct: 1092 PLARPR 1097


>gi|300744054|ref|ZP_07073073.1| lysine--tRNA ligase [Rothia dentocariosa M567]
 gi|300379779|gb|EFJ76343.1| lysine--tRNA ligase [Rothia dentocariosa M567]
          Length = 1107

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 88/371 (23%), Positives = 148/371 (39%), Gaps = 32/371 (8%)

Query: 1    MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +H IP     + +   R+R             L  R+ + +++R    +  F E+++  L
Sbjct: 750  LHPIPYGALNDPEARIRKRSTDLLVHPQQLENLRMRSSLITAIRRTLDDAGFTEVETPIL 809

Query: 50   QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
                G  +  R F T     +     L L+ +PE   K+L+  G   ++     +RN   
Sbjct: 810  NTIHGGAS-ARPFKT---FINAYGADLTLRIAPELYLKRLVVGGLGAVYELGRDFRNEGA 865

Query: 110  GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPF 162
               H PEFT+LE Y+ +  Y  + K    +I+ AA               S +    +  
Sbjct: 866  DATHNPEFTVLEAYKPYADYTVMRKLTETLIKNAARAVYGSEVLPLGEKGSTERTLTDVS 925

Query: 163  SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
             E   ++V EA +R    D+ +      + D   L   A +  I V  D     I   + 
Sbjct: 926  GEWRAVSVCEALSRALGRDISS------ETDFETLLELAHEHQIHVRDDMGAGAILEELY 979

Query: 223  IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
             E +E        T    +P   S LA  + + P   +R++L    +E+  A  E+ D +
Sbjct: 980  GELVEAKTVF--PTFYTDFPVETSPLAGAHRSKPHLVERWDLVINGMEMGTAYSEMTDAL 1037

Query: 283  EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
            EQR R  ++  +      E   IDEDFL  L   +  + G+ +G DRL ML+     I  
Sbjct: 1038 EQRRRLTEQSLKAAAGDPEAMQIDEDFLYALETGLVPTGGLGIGIDRLAMLMAQTQ-IRG 1096

Query: 342  VIWTPFSQSNQ 352
            V+  PF +  +
Sbjct: 1097 VLSFPFVKPVK 1107


>gi|296392770|ref|YP_003657654.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296179917|gb|ADG96823.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 1091

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 145/365 (39%), Gaps = 33/365 (9%)

Query: 1    MHQIPSQPWWNRD----FHYRR---------RPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     D       R          R  L KR  +  +LRE      F+E+++ 
Sbjct: 746  LRPLPDKRRGLTDPEAKVRLRHVELMTNPQARDALAKRGAVLRTLREQLWGEGFLEVETP 805

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   +   F T +   +    PLYL+ +PE   K+LL  G E++F     +RN 
Sbjct: 806  VLQRVHGGA-NAEPFRTHI---NAYDLPLYLRIAPELYLKRLLVGGMERVFEIGRVFRNE 861

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y  +      ++R +A+                      
Sbjct: 862  GVDATHNPEFTLLEAYQAHSDYRGMRDLTEQMLRASAQAVGHAGL------LAAPGPWPM 915

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            I +  A ++    ++       +      L     + G     D     +   +    +E
Sbjct: 916  IPMLTAVSQALGDEVD------EHTPAAKLRQHLVERGFECRPDWDSGQLLLELYERLVE 969

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +P  P  T+R++L    +EL  A  EL DP+EQR R
Sbjct: 970  HT--TTTPTFYSDFPLSVSPLTKQHPDRPGVTQRWDLVVGGMELATAYSELNDPVEQRRR 1027

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             + + +       E   +DEDFLA L   MP S G+ +G DR+VML+TG   I E +  P
Sbjct: 1028 LQAQSEAAASGDPEAMELDEDFLAALEHAMPPSGGLGVGVDRVVMLLTG-RTIRETLAFP 1086

Query: 347  FSQSN 351
              +  
Sbjct: 1087 LVKPK 1091


>gi|327334755|gb|EGE76466.1| lysine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 494

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 83/364 (22%), Positives = 140/364 (38%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       +   RRR             +  R +I  ++R    E  F+EI++  
Sbjct: 143 LRPLPTLHKELSEETRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPI 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +     + L+ + E   K+ +  G ++++     +RN  
Sbjct: 203 LQLVHGGAA-ARPFNTHL---NAFDIDMSLRIALELYLKRAMVGGTDRVYEMGRVFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF+MLE Y +  +   + +   +II   A+  +           +   +  ++
Sbjct: 259 IDSSHSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADALDVHQIETPKGTIDLDGQWRWV 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  +      +         L   A +  I +        +   +  E +EP
Sbjct: 319 SV------YPGLSEKLGREVTLDTPLEELQAIAAEHEIEIDQSWEAGKVVMELFGELVEP 372

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YPA    LA  +  DPR  + ++L    +E      EL+DP+ QR   
Sbjct: 373 --GLINPTFVCDYPAIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSELVDPVIQREVL 430

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+         E   +DEDFL  L    P   G+ +G DRLVML T A  I E I  P 
Sbjct: 431 TKQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFPL 489

Query: 348 SQSN 351
            +  
Sbjct: 490 LKPE 493


>gi|172041369|ref|YP_001801083.1| lysyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171852673|emb|CAQ05649.1| lysyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
          Length = 515

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 137/369 (37%), Gaps = 24/369 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        D   R R   L            R  +  +LR       F E+++  
Sbjct: 154 LRPLPVAHKEMSEDARVRHRYTDLIMREEARKNAMTRIKVMRALRHALERRGFNELETPM 213

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 214 LQTLHGGAA-ARPFVTHS---NALDIDLYLRIAPELYLKRAVVGGLDRVFEINRNFRNEG 269

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF--SFQNVNCNPFSEPE 166
               H PEF MLE Y+A+  Y         +I+  AE                +   E  
Sbjct: 270 IDRSHSPEFAMLETYQAYGDYNTAATMTREVIQEVAEEVFGTTKLTMHDGTEYDLGGEWP 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIE 224
            I V  +  +          +         L   A+  G+ V  D  W    +   I   
Sbjct: 330 VIEVYPSLNKALAEKFPDQPEVTVDSTVEELKALAKVIGLEVPKDGGWGHGKLVEEIWEF 389

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E    +     +  YP   S L   +  +   T++++LY    EL     EL+DP+ Q
Sbjct: 390 LCEDQ--LWGPVFVYNYPVETSPLVRQHRTERGVTEKWDLYLRGFELATGYSELVDPVIQ 447

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RFE + +      +E   +DEDFL  +   MP ++G  MG DRL+M  TG   I E +
Sbjct: 448 RERFEDQARLAAGGDDEAMVLDEDFLQAMEQGMPPTAGTGMGLDRLLMAFTGLG-IRETV 506

Query: 344 WTPFSQSNQ 352
             P  +  +
Sbjct: 507 LFPLVKPEK 515


>gi|159041752|ref|YP_001541004.1| lysyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157920587|gb|ABW02014.1| lysyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 493

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 88/337 (26%), Positives = 144/337 (42%), Gaps = 18/337 (5%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R  +  R  I  ++RE+     F+E+++  LQ   G     + F T +   + + +  YL
Sbjct: 166 RRIIQTRFRIIQAIREFLNSMGFMEVETPILQPVYGGA-LAKPFKTHV---NALDEDWYL 221

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + S E   K+ +  G  K++     +RN +    H PEFTMLE Y A+  Y  +M+   +
Sbjct: 222 RISLELYLKRFIIGGFNKVYEIGKVFRNEDIDVYHNPEFTMLELYWAYADYNDIMRLTED 281

Query: 139 IIRCAAEVANQKIFSFQNV-----NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           +I   A     K      +          +    +T+ EA +           +     D
Sbjct: 282 LIHQVAVKVTGKDMVEYPIGEGKVEVKLTTPFRRLTMYEALSNELG------KNVESMSD 335

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
             L  L  +   +          +  ++  + + P   +   T +  YP   + L   + 
Sbjct: 336 DELRRLMNENGLVPRGGQYVRGLMIEKLFDKLVAPK--LIQPTFITDYPQETTPLCKPHR 393

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           + P   +RFELY   +EL NA  EL DP  Q   FE+E +  K    E +P D DF+  L
Sbjct: 394 SKPGLIERFELYIAGMELANAYTELNDPQLQHKFFEEEAERFKGGDEEAHPYDYDFVLAL 453

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              MP + G+ +G DRLVM++TG  +I EVI  P  +
Sbjct: 454 SYGMPPTGGLGIGIDRLVMVLTGQYSIKEVIPFPMVK 490


>gi|111021392|ref|YP_704364.1| lysyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110820922|gb|ABG96206.1| lysine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 503

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 87/365 (23%), Positives = 147/365 (40%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWW-NRDFHYRRRPF-LLKRN----------MIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R   L+ R+           +   LR       F+E+++  
Sbjct: 147 LRPLPVAHKEMNEESRVRQRYADLIVRSEARENARKRVAVVRELRNALELRGFLEVETPM 206

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G EK+F     +RN  
Sbjct: 207 LQTVAGGAA-ARPFITHS---NALDIDLYLRIAPELFLKRCVVGGIEKVFEINRNFRNEG 262

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y A+ +Y+        +++  A+ A               +E +  
Sbjct: 263 VDSTHSPEFAMLETYEAYGTYDDSAVMIRELVQEVAQAAFGSQVV----TLADGTEYDLS 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +    Y ++     ++         L   A++ G+ V  D  +     +++ E  E 
Sbjct: 319 GEWKTLEMYPSLSQAIGVEVTPDTTVEELLALAEKVGLEVPKDKGYGH--GKLVEELWEH 376

Query: 229 NLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             G           +P   S L   + +    T++++LY    EL     EL+DP+ QR 
Sbjct: 377 QCGDQLFEPTFVRDFPVETSPLTRDHRSKAGVTEKWDLYIRGFELATGYSELVDPVIQRE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +      +E   +DE+FLA +   MP ++G  MG DRL+M +TG   I E I  
Sbjct: 437 RFVDQARLASAGDDEAMALDEEFLAAMEQGMPPTTGTGMGIDRLLMALTGLG-IRETILF 495

Query: 346 PFSQS 350
           P  + 
Sbjct: 496 PIVRP 500


>gi|257055673|ref|YP_003133505.1| lysyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585545|gb|ACU96678.1| lysyl-tRNA synthetase (class II) [Saccharomonospora viridis DSM
           43017]
          Length = 499

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 146/364 (40%), Gaps = 25/364 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +   R+R             +  R     +LR   +E  F+E+++ 
Sbjct: 146 LRPLPEKHKGLTDPEARVRQRYVDLIVNPEARQMVRHRAATLQALRSGLLERGFLEVETP 205

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F+T +   +     LYL+ +PE   K+L+  G EK+F    ++RN 
Sbjct: 206 MLHLVHGGAT-ARPFTTHI---NAYDLDLYLRIAPELFLKRLVVGGMEKVFEINRSFRNE 261

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLEWY A+  Y   M    +++R AAE                + E + 
Sbjct: 262 GADSTHNPEFTMLEWYMAYGDYNDGMGVTQDLMRRAAEAVFGDTVVRNPK----YGEVDL 317

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                    Y ++      +   +    +L   A    I          +   +  E +E
Sbjct: 318 SGDWPQITLYGSVSEALDAEITPRTPIEVLRRHADDRDISWDPSWGPGKLVEHLFEELVE 377

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP   S L   +  DP   ++++L    +EL     EL+DP+EQR R
Sbjct: 378 HT--LIQPTFVRDYPLETSPLTRQHRDDPLLVEKWDLIGFGMELGTCFSELIDPVEQRRR 435

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             ++         E   +DEDFL  L   MP + G+ MG DRL+M  TG   I E I  P
Sbjct: 436 LTEQSLLAADGDPEAMQLDEDFLRALEYGMPPTVGVGMGIDRLLMAFTG-KGIRETILFP 494

Query: 347 FSQS 350
             + 
Sbjct: 495 MVKP 498


>gi|313792704|gb|EFS40785.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|315078816|gb|EFT50838.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|327457213|gb|EGF03868.1| lysyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
          Length = 494

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 81/364 (22%), Positives = 138/364 (37%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+      +                 R  +  R +I  ++R    E  F+EI++  
Sbjct: 143 LRPLPTLHKELSEESRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPI 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +     + L+ + E   K+ +  G ++++     +RN  
Sbjct: 203 LQLVHGGAA-ARPFNTHL---NAFDIDMSLRIALELYLKRTMVGGTDRVYEMGRVFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF+MLE Y +  +   + +   +II   A+  +           +   +  ++
Sbjct: 259 IDSSHSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADALDVHQIETPKGTIDLDGQWRWV 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  +      +         L   A +  I +        +   +  E +EP
Sbjct: 319 SV------YPGLSEKLGREVTLDTPLEELQSIAAEHEIEIDQSWEAGKVVMELFGELVEP 372

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YPA    LA  +  DPR  + ++L    +E      EL+DP+ QR   
Sbjct: 373 --GLINPTFVCDYPAIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSELVDPVIQREVL 430

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+         E   +DEDFL  L    P   G+ +G DRLVML T A  I E I  P 
Sbjct: 431 TKQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFPL 489

Query: 348 SQSN 351
            +  
Sbjct: 490 LKPE 493


>gi|311112624|ref|YP_003983846.1| lysine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944118|gb|ADP40412.1| lysine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 1110

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 88/371 (23%), Positives = 149/371 (40%), Gaps = 32/371 (8%)

Query: 1    MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +H IP     + +   R+R             L  R+ + +++R    +  F E+++  L
Sbjct: 753  LHPIPYGALNDPEARIRKRSTDLLVHPQQLENLRMRSSLITAIRRTLDDAGFTEVETPIL 812

Query: 50   QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
                G  +  R F T     +     L L+ +PE   K+L+  G   ++     +RN   
Sbjct: 813  NTIHGGAS-ARPFKT---FINAYGADLTLRIAPELYLKRLVVGGLGAVYELGRDFRNEGA 868

Query: 110  GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPF 162
               H PEFT+LE Y+ +  Y  + K    +I+ AA               S +    +  
Sbjct: 869  DATHNPEFTVLEAYKPYADYTVMRKLTETLIKNAARAVYGSEVLPLGEKGSTERTLTDVS 928

Query: 163  SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
             E   ++V EA +R    D+ +      + D   L   A +  I V  D     I   + 
Sbjct: 929  GEWRAVSVCEALSRALGRDISS------ETDFETLLELAHEHQIHVRDDMGAGAILEELY 982

Query: 223  IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
             E +E        T    +P   S LA  + ++P   +R++L    +E+  A  E+ D +
Sbjct: 983  GELVEAKTVF--PTFYTDFPVETSPLAGAHRSEPHLVERWDLVINGMEMGTAYSEMTDAL 1040

Query: 283  EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
            EQR R  ++  +      E   IDEDFL  L   +  + G+ +G DRL ML+     I  
Sbjct: 1041 EQRRRLTEQSLKAAAGDPEAMQIDEDFLYALETGLVPTGGLGIGIDRLAMLMAQTQ-IRG 1099

Query: 342  VIWTPFSQSNQ 352
            V+  PF +  +
Sbjct: 1100 VLSFPFVKPVK 1110


>gi|313814026|gb|EFS51740.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
          Length = 494

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 83/364 (22%), Positives = 140/364 (38%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       +   RRR             +  R +I  ++R    E  F+EI++  
Sbjct: 143 LRPLPTLHKELSEETRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPI 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +     + L+ + E   K+ +  G ++++     +RN  
Sbjct: 203 LQLVHGGAA-ARPFNTHL---NAFDIDMSLRIALELYLKRTMVGGTDRVYEMGRVFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF+MLE Y +  +   + +   +II   A+  +           +   +  ++
Sbjct: 259 IDSSHSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADALDVHQIETPKGTIDLDGQWRWV 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  +      +         L   A +  I +        +   +  E +EP
Sbjct: 319 SV------YPGLSEKLGREVTLDTPLEELQSIAAEHEIEIDQSWEAGKVVMELFGELVEP 372

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YPA    LA  +  DPR  + ++L    +E      EL+DP+ QR   
Sbjct: 373 --GLINPTFVCDYPAIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSELVDPVIQREVL 430

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+         E   +DEDFL  L    P   G+ +G DRLVML T A  I E I  P 
Sbjct: 431 TKQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFPL 489

Query: 348 SQSN 351
            +  
Sbjct: 490 LKPE 493


>gi|298345631|ref|YP_003718318.1| lysine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298235692|gb|ADI66824.1| lysine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 521

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 90/369 (24%), Positives = 149/369 (40%), Gaps = 31/369 (8%)

Query: 1   MHQIPSQP--------WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQF 41
           +  +P             + D   RRR             +  R+ +  +LR Y  E+ +
Sbjct: 162 LRPLPKSYINEAGEEVSLSEDMRVRRRDLDMIMRPAARDMVRNRSRVVQTLRRYLDEHDY 221

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           IE+++  LQ   G     R F T +   +     LYL+ +PE   K+ L  G +K+F   
Sbjct: 222 IEVETPMLQTLHGGAA-ARPFVTHM---NAYDTELYLRIAPELFLKRCLIGGIDKVFEIN 277

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +RN      H PEFTMLE Y A+  Y Q+ +    +I+  A               + 
Sbjct: 278 RNFRNEGADSSHSPEFTMLEVYCAYGDYHQIARLTQEMIQRCARDVFGTEVV----TLSD 333

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +E +     +    Y ++      +   +  +  L   A + GI +        I   +
Sbjct: 334 GTEFDLSGEWKWIDLYGSLSEALGQEVTVRTPKDALVALADRLGIELEPYYPSGKIVEVL 393

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E +     +   T +  +P   S L   +P  P   ++++L     E+     EL DP
Sbjct: 394 WEELVGDK--LWEPTFVCDFPEDTSPLVKTHPDKPGQVQKWDLIIRGFEVATGYSELNDP 451

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           + QR RFE++  +      E   +DEDFL  +   MP + G+ MG DRL+M +TG+  I 
Sbjct: 452 VVQRARFEQQALDAANGDPEAMEVDEDFLISMEQGMPPAGGMGMGLDRLLMTLTGSG-IR 510

Query: 341 EVIWTPFSQ 349
           E I  P  +
Sbjct: 511 ETITFPLVK 519


>gi|304390680|ref|ZP_07372633.1| lysine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304326436|gb|EFL93681.1| lysine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 521

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 90/369 (24%), Positives = 150/369 (40%), Gaps = 31/369 (8%)

Query: 1   MHQIPSQP--------WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQF 41
           +  +P             + D   RRR             +  R+ +  +LR Y  E+ +
Sbjct: 162 LRPLPKSYINEAGEEVSLSEDMRVRRRDLDMIMRPAARDMVRNRSRVVQTLRRYLDEHDY 221

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           IE+++  LQ   G     R F T +   +     LYL+ +PE   K+ L  G +K+F   
Sbjct: 222 IEVETPMLQTLHGGAA-ARPFVTHM---NAYDTELYLRIAPELFLKRCLIGGIDKVFEIN 277

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +RN      H PEFTMLE Y A+  Y Q+ +    +I+  A               + 
Sbjct: 278 RNFRNEGADSSHSPEFTMLEVYCAYGDYHQIARLTQEMIQRCARDVFGTEVV----TLSD 333

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +E +     +    Y ++      +   +  +  L   A++ GI +        I   +
Sbjct: 334 GTEFDLSGEWKWIDLYGSLSEALGQEVTVRTPKDALVALAERLGIELEPYYLSGKIVEVL 393

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E +     +   T +  +P   S L   +P  P   ++++L     E+     EL DP
Sbjct: 394 WEELVGDK--LWEPTFVCDFPEDTSPLVKTHPDKPGQVQKWDLIIRGFEVATGYSELNDP 451

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           + QR RFE++  +      E   +DEDFL  +   MP + G+ MG DRL+M +TG+  I 
Sbjct: 452 VVQRARFEQQALDAANGDPEAMEVDEDFLISMEQGMPPAGGMGMGLDRLLMTLTGSG-IR 510

Query: 341 EVIWTPFSQ 349
           E I  P  +
Sbjct: 511 ETITFPLVK 519


>gi|108801721|ref|YP_641918.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119870872|ref|YP_940824.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|108772140|gb|ABG10862.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119696961|gb|ABL94034.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 512

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 89/364 (24%), Positives = 147/364 (40%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               +R  +  +LR       F+E+++  
Sbjct: 156 LRPLPVAHKEMSEEARVRQRYVDLIVRPEARTIARQRVAVVRALRNALERRGFLELETPM 215

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ L  G EK+F     +RN  
Sbjct: 216 LQTLAGGAA-ARPFVTHS---NALDVDLYLRIAPELFLKRALVGGFEKVFELNRNFRNEG 271

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+  Y         +I+        +    + V     +  +  
Sbjct: 272 IDSTHSPEFAMLETYQAYGDYNDSAVVTRELIQE----VADEAIGTRQVPLADGTVYDLD 327

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKI 226
              E+   Y ++      +   Q     L+  A + G+ +  D       +   +    +
Sbjct: 328 GEWESLEMYPSLSAALGEEITPQTPADELWRIADRLGVEIPRDRGYGHGKLIEELWEHTV 387

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +P   + L   + + P  T++++LY    EL     EL+DPI QR 
Sbjct: 388 GE--DLWAPTFVRDFPVETTPLTRSHRSVPGVTEKWDLYVRKFELATGYSELIDPIIQRE 445

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ +      +E   +DEDFLA L   MP S+G  MG DRL+M +TG  +I E I  
Sbjct: 446 RFEEQARAAAAGDDEAMVLDEDFLAALEYGMPPSTGTGMGIDRLLMALTGL-SIRETILF 504

Query: 346 PFSQ 349
           P  +
Sbjct: 505 PIVR 508


>gi|315657872|ref|ZP_07910752.1| lysine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315491669|gb|EFU81280.1| lysine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 521

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 90/369 (24%), Positives = 149/369 (40%), Gaps = 31/369 (8%)

Query: 1   MHQIPSQP--------WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQF 41
           +  +P             + D   RRR             +  R+ +  +LR Y  E+ +
Sbjct: 162 LRPLPKSYINEAGEEVSLSEDMRVRRRDLDMIMRPAARDMVRNRSRVVQTLRRYLDEHDY 221

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           IE+++  LQ   G     R F T +   +     LYL+ +PE   K+ L  G +K+F   
Sbjct: 222 IEVETPMLQTLHGGAA-ARPFVTHM---NAYDTELYLRIAPELFLKRCLIGGIDKVFEIN 277

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +RN      H PEFTMLE Y A+  Y Q+ +    +I+  A               + 
Sbjct: 278 RNFRNEGADSSHSPEFTMLEVYCAYGDYHQIARLTQEMIQRCARDVFGTEVV----TLSD 333

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +E +     +    Y ++      +   +  +  L   A + GI +        I   +
Sbjct: 334 GTEFDLSGEWKWIDLYGSLSEALGQEVTVRTPKDALVALADRLGIELEPYYPSGKIVEVL 393

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E +     +   T +  +P   S L   +P  P   ++++L     E+     EL DP
Sbjct: 394 WEELVGDK--LWEPTFVCDFPEDTSPLVKTHPDKPGQVQKWDLIIRGFEVATGYSELNDP 451

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           + QR RFE++  +      E   +DEDFL  +   MP + G+ MG DRL+M +TG+  I 
Sbjct: 452 VVQRARFEQQALDAANGDPEAMEVDEDFLISMEQGMPPAGGMGMGLDRLLMTLTGSG-IR 510

Query: 341 EVIWTPFSQ 349
           E I  P  +
Sbjct: 511 ETITFPLVK 519


>gi|315082875|gb|EFT54851.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
          Length = 494

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 81/364 (22%), Positives = 138/364 (37%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+      +                 R  +  R +I  ++R    E  F+EI++  
Sbjct: 143 LRPLPTLHKELSEESRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPI 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +     + L+ + E   K+ +  G ++++     +RN  
Sbjct: 203 LQLVHGGAA-ARPFNTHL---NAFDIDMSLRIALELYLKRTMVGGTDRVYEMGRVFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF+MLE Y +  +   + +   +II   A+  +           +   +  ++
Sbjct: 259 IDSSHSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADALDVHQIETPKGTIDLDGQWRWV 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  +      +         L   A +  I +        +   +  E +EP
Sbjct: 319 SV------YPGLSEKLGREVTLDTPLEELQSIAAEHEIEIDQSWEAGKVVMELFGELVEP 372

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YPA    LA  +  DPR  + ++L    +E      EL+DP+ QR   
Sbjct: 373 --GLINPTFVCDYPAIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSELVDPVIQREVL 430

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+         E   +DEDFL  L    P   G+ +G DRLVML T A  I E I  P 
Sbjct: 431 TKQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFPL 489

Query: 348 SQSN 351
            +  
Sbjct: 490 LKPE 493


>gi|171741192|ref|ZP_02916999.1| hypothetical protein BIFDEN_00264 [Bifidobacterium dentium ATCC
           27678]
 gi|283455445|ref|YP_003360009.1| lysyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|306823487|ref|ZP_07456862.1| lysine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309802618|ref|ZP_07696722.1| lysine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|171276806|gb|EDT44467.1| hypothetical protein BIFDEN_00264 [Bifidobacterium dentium ATCC
           27678]
 gi|283102079|gb|ADB09185.1| lysS Lysyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|304553194|gb|EFM41106.1| lysine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308220682|gb|EFO76990.1| lysine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 558

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 86/366 (23%), Positives = 151/366 (41%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+     N D   R+           R  +  R+   +SLR+ F ++ FIE+++  
Sbjct: 198 LQPLPALHKDLNEDTRTRKPYIGMIADEKIRNMVRNRSKAVASLRKTFADHDFIEVETPM 257

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     LYL+ +PE   K+ L  G +++F     +RN  
Sbjct: 258 LQTVHGGAA-ARPFTTHM---NAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEG 313

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A+ +Y+ +      +++  A                 +   E +
Sbjct: 314 ADATHAPEFTMVEAYQAYGNYDTIGALVKQLVQDTAMDVFGSHKVTLLDGTEYDLGGEWK 373

Query: 167 YITVAEAFARYANIDL-GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I++ ++ +     ++      +        L   A + G+     +    +   +    
Sbjct: 374 TISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADRLGVERDDVENHGKLVEHLWEHF 433

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L   + +     ++++LY    EL     EL DP+ QR
Sbjct: 434 YEDK--LYEPTFVRDFPVETSPLVKGHRSKAGVVEKWDLYVRGFELATGYSELNDPVVQR 491

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + +       E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I 
Sbjct: 492 ERFVAQAKAALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETIT 550

Query: 345 TPFSQS 350
            P  + 
Sbjct: 551 FPLVKP 556


>gi|297566644|ref|YP_003685616.1| lysyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296851093|gb|ADH64108.1| lysyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 503

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 149/369 (40%), Gaps = 31/369 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +    +D    YR+R                R+ +   +R+Y  +  F+E++  
Sbjct: 136 LHPLPDKWHGIKDLETRYRQRYLDLIQNPEVREVFRIRSRVTRYIRDYLTDRGFLEVEGP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +LQ   G  T  R F T     + +    YL+ + E   K+LL  G EK+F     +RN 
Sbjct: 196 TLQVVAGG-TEARPFKT---YHNALNHEFYLRIALELHLKRLLVGGFEKVFEIGRNYRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA-AEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y  +M    +++    A +       +     +  +   
Sbjct: 252 GISHKHNPEFTMLEAYWAYADYTDMMALVEDMLSGMVASIHGTTKIRYGEHEIDFATPFR 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I         A +D        D  D   L   A      +        +  ++  E +
Sbjct: 312 RIDFVGTLKEKAGLDF-------DPTDLERLRQFADSKHPEMR-SVPSYKLLDKLFGEYV 363

Query: 227 EPNLGINCCTILDRYPAPESALANIYPA--DPRFTKRFELYACNIELCNACDELLDPIEQ 284
           EP   +   T +   P   S L   +        T+R +LY    E+     EL D ++Q
Sbjct: 364 EPT--LIQPTFVMDVPLAISPLVKRHRDPAKANLTERADLYVAGFEISPIYSELNDALDQ 421

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RFE++   ++    E    DEDFL  L   MP ++G+ +G DRL ML+T  ++I +VI
Sbjct: 422 RKRFEEQSARRQAGDEEEPEQDEDFLLALEYGMPPAAGMGLGIDRLTMLLTDQHSIRDVI 481

Query: 344 WTPFSQSNQ 352
             P  +  +
Sbjct: 482 LFPLLKPRK 490


>gi|239916712|ref|YP_002956270.1| lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
           [Micrococcus luteus NCTC 2665]
 gi|281414830|ref|ZP_06246572.1| lysyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239837919|gb|ACS29716.1| lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
           [Micrococcus luteus NCTC 2665]
          Length = 504

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 85/364 (23%), Positives = 136/364 (37%), Gaps = 25/364 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R             +  R  + S++R     + ++E+++  
Sbjct: 152 LRPLPVLHADLNEETRVRQRYADLIVREEARRMVYTRAKVTSAVRRTLEGHGYVEVETPM 211

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T L   +   +P+ L+ + E   K+ +  G +++F     +RN  
Sbjct: 212 LQLVHGGA-LARPFETHL---NAFDQPMTLRIATELYLKRAVVGGIDRVFEIGRVFRNEG 267

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT LE Y A      + +    II  AA+                       
Sbjct: 268 VDSTHSPEFTTLESYEAWADMHVMAERMQEIILNAADAVGAGRRLETAKGVIDLD----- 322

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                 A Y  +      +     D   L   A +  ++V        +   +  E +EP
Sbjct: 323 GEWAWVAVYPGLSEAVGREITPDTDAETLRAIAAEHEVKVDPAWDAEKLVIELFGEIVEP 382

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP     LA  + +D R  + ++L    +E   A  EL+DP+ QR R 
Sbjct: 383 T--LMNPTFVYDYPPAAQPLARPHRSDDRVIEAWDLIIGGMERGTAFSELIDPVIQRERL 440

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +        +E   +DEDFL  L    P   GI +G DRLVML T A  I E I  P 
Sbjct: 441 TAQSAMAAAGDDEAMQLDEDFLRALEYGAPPMGGIGLGIDRLVMLFTDAG-IRETILFPL 499

Query: 348 SQSN 351
            +  
Sbjct: 500 LKPE 503


>gi|313828964|gb|EFS66678.1| lysyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|315109927|gb|EFT81903.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
          Length = 494

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 81/364 (22%), Positives = 138/364 (37%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+      +                 R  +  R +I  ++R    E  F+EI++  
Sbjct: 143 LRPLPTLHKELSEESRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPI 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +     + L+ + E   K+ +  G ++++     +RN  
Sbjct: 203 LQLVHGGAA-ARPFNTHL---NAFDIDMSLRIALELYLKRTMVGGTDRVYEMGRVFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF+MLE Y +  +   + +   +II   A+  +           +   +  ++
Sbjct: 259 IDSSHSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADALDVHQIETPKGTIDLDGQWRWV 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  +      +         L   A +  I +        +   +  E +EP
Sbjct: 319 SV------YPGLSEKLGREVTLDTPLEELQSIAAEHEIEIDQSWEAGKVVMELFSELVEP 372

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YPA    LA  +  DPR  + ++L    +E      EL+DP+ QR   
Sbjct: 373 --GLINPTFVCDYPAIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSELVDPVIQREVL 430

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+         E   +DEDFL  L    P   G+ +G DRLVML T A  I E I  P 
Sbjct: 431 TKQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFPL 489

Query: 348 SQSN 351
            +  
Sbjct: 490 LKPE 493


>gi|319784265|ref|YP_004143741.1| lysyl-tRNA synthetase-related protein GenX [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317170153|gb|ADV13691.1| lysyl-tRNA synthetase-related protein GenX [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 346

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 181/342 (52%), Positives = 229/342 (66%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW  D H  RRP L+ RN I + LR++F  + F+E+ + +LQ SPGNE H+ AF+TE
Sbjct: 4   ASPWWTADVHADRRPRLMLRNGIAAGLRDWFAAHDFVEVQTAALQVSPGNEAHLAAFATE 63

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            +  D  R PLYL TSPEF+CKKL+AAGE +IF F   +RN E+G LH PEFTMLEWYR 
Sbjct: 64  AVGPDGARAPLYLHTSPEFACKKLIAAGETRIFSFGPVYRNRERGPLHHPEFTMLEWYRV 123

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            E+YE LM DC   +  AA      +FSF+  +C+PF+EPE +TVA+AFA +A IDL  T
Sbjct: 124 GEAYESLMLDCAAFLALAATRTGATLFSFRGRDCDPFAEPERLTVADAFAHHAGIDLLAT 183

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L+      G+R A DD+W+D+FSR+++EK+EP LG    TIL  YP  E
Sbjct: 184 VAADGSTDRDALHAALTHVGLRTAPDDSWADLFSRVMVEKVEPFLGQGRATILCEYPVAE 243

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     DPR  +RFELY C +EL N   EL D  EQR RF  EM EK++IY E YP+
Sbjct: 244 AALARPSQRDPRVAERFELYCCGVELANGFGELTDADEQRRRFVTEMDEKQRIYGERYPL 303

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DEDFL+ L  MP +SGIA+GFDRL ML TGA  I +VIWTP 
Sbjct: 304 DEDFLSALAIMPPASGIALGFDRLAMLATGAQKIEDVIWTPV 345


>gi|283457248|ref|YP_003361818.1| lysyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283133233|dbj|BAI63998.1| lysyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 527

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 150/376 (39%), Gaps = 37/376 (9%)

Query: 1   MHQIPSQPW-WNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R             + KR +I  ++R    ++ +IE+++  
Sbjct: 163 LRPMPVLHKDLNEETRVRQRYLDLMVRDEARELVKKRALITRTVRRVLEDHGYIEVETPV 222

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  T  R F T L   +   +P+ ++ + E   K+ +  G ++++     +RN  
Sbjct: 223 LQLVHGGAT-ARPFRTHL---NAFDQPMTMRIATELPLKRAVVGGIDRVYEIGRVFRNEG 278

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT LE Y  +     + +    II+  A+    +    +N   + F E +++
Sbjct: 279 VDSTHSPEFTTLECYETYADQFVMAERMKEIIQSCAKAVGTERIETENGTIDLFGEWKWV 338

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            V      Y  +     ++   + D  +L   A++  + +        + + +  E +EP
Sbjct: 339 GV------YPGLSEAVGVEITPETDASVLREIAEKHEVDIDPKWDAEKLVTELFGEIVEP 392

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP     LA  + +     + ++L    +E   A  EL+DP+ QR R 
Sbjct: 393 T--LVNPTFVYDYPPSAQPLARPHRSGEPLIEAWDLIIGGMERGTAFSELIDPVIQRERL 450

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG------------ 335
             +        +E   +DEDFL  L    P   G+ +G DRL+ML+ G            
Sbjct: 451 TAQSLLAAAGDDEAMELDEDFLRALEHGAPPMGGLGLGIDRLIMLLAGDQDPERPGTVVR 510

Query: 336 ANNINEVIWTPFSQSN 351
              I E I  P  +  
Sbjct: 511 QPGIRETILFPLMKPE 526


>gi|50955651|ref|YP_062939.1| lysyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50952133|gb|AAT89834.1| lysyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 504

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 84/339 (24%), Positives = 146/339 (43%), Gaps = 17/339 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
              R R  +L R    +SLR  F ++ FIE+++  LQ   G  +  R F T     +   
Sbjct: 180 ARDRARRNVLDRAAAVASLRTTFADSGFIEVETPMLQVMHGGAS-ARPFVTHS---NAFD 235

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
             L+L+ +PE   K+ +  G +++F     +RN      H PEF MLE Y+A+  Y  + 
Sbjct: 236 TELFLRIAPELYLKRAVVGGIDRVFEINRNFRNEGADSTHLPEFAMLEAYQAYGDYNTIA 295

Query: 134 KDCMNIIRCAAEVANQKIFSFQNV--NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                +I+ AA   +             +   + + I + ++ +     ++        +
Sbjct: 296 DLTQALIQNAAVAVSGSHVVTWADGTEYDLSGDWDRIRMYDSLSEALGEEITP------E 349

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                L   A +AG+ + H          +    +    G+   T +  +P   S L  +
Sbjct: 350 TPLQRLRELAAEAGVEIEHPLP-GKYVEELWEHHV--KSGLVRPTFVMDFPVDTSPLVRV 406

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
           + + P   ++++LY    EL     EL+DP+ QR RF ++ +      +E   +DE+FL 
Sbjct: 407 HRSLPGVVEKWDLYMRGFELATGYSELVDPVVQRERFVEQARLAAAGDDEAMRLDEEFLR 466

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            L   MP + G+ MG DRL+M +TG   I E I  P  +
Sbjct: 467 ALEFGMPPTGGMGMGIDRLLMALTGLG-IRETILFPLVK 504


>gi|255326114|ref|ZP_05367201.1| lysine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296825|gb|EET76155.1| lysine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 527

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 82/376 (21%), Positives = 150/376 (39%), Gaps = 37/376 (9%)

Query: 1   MHQIPSQPW-WNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R             + KR +I  ++R    ++ +IE+++  
Sbjct: 163 LRPMPVLHKDLNEETRVRQRYLDLMVREEARELVKKRALITRTVRRVLEDHGYIEVETPV 222

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  T  R F T L   +   +P+ ++ + E   K+ +  G E+++     +RN  
Sbjct: 223 LQLVHGGAT-ARPFRTHL---NAFDQPMTMRIATELPLKRAVVGGIERVYEIGRVFRNEG 278

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT LE Y  +     + +    II+  A+    +    +N   + F E +++
Sbjct: 279 VDSTHSPEFTTLECYETYADQFVMAERMKEIIQSCAKAVGTERIETENGTIDLFGEWKWV 338

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            V      Y  +     ++   + D  +L   A++  + +        + + +  E +EP
Sbjct: 339 GV------YPGLSEAVGVEITPETDASVLREIAEKHEVDIDPKWDAEKLVTELFGEIVEP 392

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP     LA  + +     + ++L    +E   A  EL+DP+ QR R 
Sbjct: 393 T--LVNPTFVYDYPPSAQPLARPHRSGEPLIEAWDLIIGGMERGTAFSELIDPVIQRERL 450

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG------------ 335
             +        +E   +DEDFL  L    P   G+ +G DRL+ML+ G            
Sbjct: 451 TAQSLLAAAGDDEAMELDEDFLRALEHGAPPMGGLGLGIDRLIMLLAGDQDPERPGTVVR 510

Query: 336 ANNINEVIWTPFSQSN 351
              I E I  P  +  
Sbjct: 511 QPGIRETILFPLMKPE 526


>gi|313764813|gb|EFS36177.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313772713|gb|EFS38679.1| lysyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313803367|gb|EFS44549.1| lysyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313807056|gb|EFS45554.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313811194|gb|EFS48908.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313815623|gb|EFS53337.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313817841|gb|EFS55555.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313821333|gb|EFS59047.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313824726|gb|EFS62440.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313826390|gb|EFS64104.1| lysyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313832195|gb|EFS69909.1| lysyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834312|gb|EFS72026.1| lysyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|313839468|gb|EFS77182.1| lysyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314916420|gb|EFS80251.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314921636|gb|EFS85467.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314926368|gb|EFS90199.1| lysyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314930718|gb|EFS94549.1| lysyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314955165|gb|EFS99570.1| lysyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314959359|gb|EFT03461.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314961533|gb|EFT05634.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314964076|gb|EFT08176.1| lysyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314969185|gb|EFT13283.1| lysyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314974409|gb|EFT18504.1| lysyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976959|gb|EFT21054.1| lysyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314980053|gb|EFT24147.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314985404|gb|EFT29496.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314986908|gb|EFT31000.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314990599|gb|EFT34690.1| lysyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315081802|gb|EFT53778.1| lysyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315086497|gb|EFT58473.1| lysyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315088210|gb|EFT60186.1| lysyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315097241|gb|EFT69217.1| lysyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315099567|gb|EFT71543.1| lysyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315102202|gb|EFT74178.1| lysyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315107524|gb|EFT79500.1| lysyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|327331244|gb|EGE72983.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327333873|gb|EGE75590.1| lysine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327444660|gb|EGE91314.1| lysyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327447380|gb|EGE94034.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327450434|gb|EGE97088.1| lysyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327454452|gb|EGF01107.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327456519|gb|EGF03174.1| lysyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328756216|gb|EGF69832.1| lysyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328758164|gb|EGF71780.1| lysyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328758595|gb|EGF72211.1| lysyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
 gi|328759561|gb|EGF73167.1| lysine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 494

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 81/364 (22%), Positives = 138/364 (37%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+      +                 R  +  R +I  ++R    E  F+EI++  
Sbjct: 143 LRPLPTLHKELSEESRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPI 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +     + L+ + E   K+ +  G ++++     +RN  
Sbjct: 203 LQLVHGGAA-ARPFNTHL---NAFDIDMSLRIALELYLKRTMVGGTDRVYEMGRVFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF+MLE Y +  +   + +   +II   A+  +           +   +  ++
Sbjct: 259 IDSSHSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADALDVHQIETPKGTIDLDGQWRWV 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  +      +         L   A +  I +        +   +  E +EP
Sbjct: 319 SV------YPGLSEKLGREVTLDTPLEELQSIAAEHEIEIDQSWEAGKVVMELFGELVEP 372

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YPA    LA  +  DPR  + ++L    +E      EL+DP+ QR   
Sbjct: 373 --GLINPTFVCDYPAIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSELVDPVIQREVL 430

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+         E   +DEDFL  L    P   G+ +G DRLVML T A  I E I  P 
Sbjct: 431 TKQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFPL 489

Query: 348 SQSN 351
            +  
Sbjct: 490 LKPE 493


>gi|289705689|ref|ZP_06502073.1| lysine--tRNA ligase [Micrococcus luteus SK58]
 gi|289557529|gb|EFD50836.1| lysine--tRNA ligase [Micrococcus luteus SK58]
          Length = 504

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 85/364 (23%), Positives = 137/364 (37%), Gaps = 25/364 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R             +  R  + S++R     + ++E+++  
Sbjct: 152 LRPLPVLHADLNEETRVRQRYADLIVREEARRMVYTRAKVTSAVRRTLEGHGYVEVETPM 211

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T L   +   +P+ L+ + E   K+ +  G +++F     +RN  
Sbjct: 212 LQLVHGGA-LARPFETHL---NAFDQPMTLRIATELYLKRAVVGGIDRVFEIGRVFRNEG 267

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT LE Y A      + +    II  AA+                       
Sbjct: 268 VDSTHSPEFTTLESYEAWADMHVMAERMQEIILNAADAVGAGRRLETAKGVIDLD----- 322

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                 A Y  +      +     D  +L   A +  ++V        +   +  E +EP
Sbjct: 323 GEWAWVAVYPGLSEAVGREITPDTDAEMLRAIAAEHEVKVDPAWDAEKLVIELFGEIVEP 382

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP     LA  + +D R  + ++L    +E   A  EL+DP+ QR R 
Sbjct: 383 T--LMNPTFVYDYPPAAQPLARPHRSDDRVIEAWDLIIGGMERGTAFSELIDPVIQRERL 440

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +        +E   +DEDFL  L    P   GI +G DRLVML T A  I E I  P 
Sbjct: 441 TAQSAMAAAGDDEAMQLDEDFLRALEYGAPPMGGIGLGIDRLVMLFTDAG-IRETILFPL 499

Query: 348 SQSN 351
            +  
Sbjct: 500 LKPE 503


>gi|209965118|ref|YP_002298033.1| tRNA synthetases class II (D, K and N) subfamily, putative
           [Rhodospirillum centenum SW]
 gi|209958584|gb|ACI99220.1| tRNA synthetases class II (D, K and N) subfamily, putative
           [Rhodospirillum centenum SW]
          Length = 368

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 169/357 (47%), Positives = 220/357 (61%), Gaps = 7/357 (1%)

Query: 1   MHQIPSQ------PWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPG 54
           +  IP        PWW+ D   RR   L  R  I  ++R +F    F E+++ +LQ SPG
Sbjct: 4   LPPIPPSVLPSALPWWHPDAFARRSTALAARGRITRAVRAWFEAEDFAEVETPALQVSPG 63

Query: 55  NETHIRAFSTELIIQDHIRKP-LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLH 113
            E H++AFSTEL       +  L+L TSPEF+ KKLLAAG  ++F  AH +RNGE+   H
Sbjct: 64  LEVHLQAFSTELRGPHPDDRRVLHLHTSPEFAMKKLLAAGLPRLFQLAHVFRNGERSATH 123

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
            PEF+MLEWYRA   Y  LM+DC  ++R A       +       C+PF   E ++VA+A
Sbjct: 124 HPEFSMLEWYRAGAGYTDLMRDCEALVRAACRAGGTDLLRRGEATCDPFGAWEVLSVADA 183

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F RYA++DL  T  +P +PD  LL  +A + GIR A  DTW D+F RI +E+IEP LG  
Sbjct: 184 FRRYADVDLLATAPDPLRPDPALLAAEAARIGIRTAPGDTWEDLFFRISLERIEPRLGYG 243

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             T L  YP   +ALA   P DPR  +RFELYAC +EL NA  EL DP  QR RFE +M 
Sbjct: 244 RPTFLADYPVSMAALARAKPGDPRVAERFELYACGVELANAFGELTDPAVQRARFEADMA 303

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           EK+++Y E YP+DE+FL  L  MP+S+GIA+GFDRLVMLVTGA  I +V+W P +  
Sbjct: 304 EKQRLYGERYPLDEEFLDALALMPESAGIALGFDRLVMLVTGAARIEDVLWAPVAAP 360


>gi|326384068|ref|ZP_08205751.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197228|gb|EGD54419.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 510

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 80/369 (21%), Positives = 148/369 (40%), Gaps = 29/369 (7%)

Query: 1   MHQIPSQPWW-NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R                R  + + LR++  +  F+E+++  
Sbjct: 154 LRPLPVAHKEMNEESRVRQRYVDLIVRPEARAIARTRVEVMAQLRKFMTDRGFLEVETPM 213

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     +     L+L+ +PE   K+ +  G E++F     +RN  
Sbjct: 214 LQTLHGGAA-ARPFVTHS---NAFDMDLFLRIAPELFLKRCVVGGIERVFEVNRNFRNEG 269

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--NCNPFSEPE 166
               H PEF MLE Y+A+ +Y+        +++  A  A   +          +   E  
Sbjct: 270 ADSTHSPEFAMLETYQAYGTYDDAAVMTRELVQSVAMGALGTLTPTMPDGSTYDLSGEWT 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT--WSDIFSRILIE 224
            +++  + +     ++       D+     L   A + G+ V  D       +   +   
Sbjct: 330 ELSMYPSLSEALGEEIVPAQTTVDE-----LLKIADRVGLEVPKDKGYGHGKLVEELWEH 384

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +     ++    +  +P   S L   + + P   ++++LY    EL     EL+DP+ Q
Sbjct: 385 LVGSK--LDEPVFVRDFPVETSPLVRSHRSIPGVVEKWDLYVRGFELATGYSELVDPVIQ 442

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RF  + +      +E   +DE+FL  +   MP ++G  MG DRL+M +TG   I E +
Sbjct: 443 RERFVDQARLAAAGDDEAMVLDEEFLVAMEHGMPPTAGTGMGIDRLLMALTGLG-IRETV 501

Query: 344 WTPFSQSNQ 352
             P  +  Q
Sbjct: 502 LFPLVKPIQ 510


>gi|77464047|ref|YP_353551.1| putative lysyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|77388465|gb|ABA79650.1| putative lysyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 345

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 189/343 (55%), Positives = 230/343 (67%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + +  WW    H  RRP LL RN IQS+LR +     F+E+D  +LQ SPGNE H+  F+
Sbjct: 1   MSASSWWQPHRHADRRPLLLARNRIQSALRGWLGAEGFVEVDPAALQVSPGNEAHLHGFA 60

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           TE I  D   + +YL TSPEF+ KKLLAAGE +I  F+H WRN E+G LH PEFTMLEWY
Sbjct: 61  TEAIGNDGQGRRMYLHTSPEFAMKKLLAAGETRIAAFSHVWRNRERGVLHSPEFTMLEWY 120

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           R  E YE LM DC   +R AAE A  +   F++  C+PF+ PE ++VAEAFAR+A IDL 
Sbjct: 121 RVGEGYEVLMADCAAFLRLAAEAAGARKLRFRDRTCDPFAAPERLSVAEAFARHAGIDLL 180

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
            T+D    PD   L      AG+    DD WSD+ SR+L+EK+EP+LG    TILDRYPA
Sbjct: 181 ATVDAQGLPDAEALRRAMAHAGLTAGADDGWSDMLSRVLVEKVEPHLGQGRPTILDRYPA 240

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
            E+ALA   P D R  +RFELYAC +EL N   EL DP EQR RFE EM EK+++Y ETY
Sbjct: 241 AEAALARRAPDDARVAERFELYACGVELANGFGELTDPAEQRRRFEAEMAEKERVYGETY 300

Query: 304 PIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P+DE+FL  L  MP +SGIAMGFDRLVML TGA  I+EVIW P
Sbjct: 301 PLDEEFLEALALMPPASGIAMGFDRLVMLATGAPRIDEVIWAP 343


>gi|148272033|ref|YP_001221594.1| lysyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829963|emb|CAN00890.1| lysS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 513

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 86/362 (23%), Positives = 149/362 (41%), Gaps = 25/362 (6%)

Query: 1   MHQIPSQPWWNRD-FHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+      D    R R   L            R  + +S+RE F +  ++E+++  
Sbjct: 164 LLPLPNLHSELSDETRVRSRYLDLIVRDQARKNVLDRAKVNASMRETFRQRGYVEVETPM 223

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  +  R F T     +     +YL+ +PE   K+ +  G +++F     +RN  
Sbjct: 224 LQVMHGGAS-ARPFVTHS---NAFDTEMYLRIAPELYLKRAVVGGIDRVFEINRNFRNEG 279

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y A+  Y  + +    +++ AA                  +E +  
Sbjct: 280 ADSTHSPEFAMLEAYEAYGDYTSIAELTQTLVQDAAMAVAGSHVV----TWADGTEYDLG 335

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +  + Y ++     +D         L   A + G+ V    T   +   +    +  
Sbjct: 336 GEWDRISMYGSLSAAAGVDITPATTGDELQAIADREGV-VVPLSTHGKLVEELWEHFV-- 392

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  +P   S L   + +     ++++LY    EL     EL+DP+ QR RF
Sbjct: 393 KGGLERPTFVLDFPVETSPLTRAHRSIEGVVEKWDLYIRGFELATGYSELVDPVVQRERF 452

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + ++  +  +E  P+DE+FL  L   MP S G+ MG DRL+M +TG   I E I  P 
Sbjct: 453 VDQARQSARGDDEAMPLDEEFLRALEHGMPPSGGMGMGVDRLLMAITGLG-IRETILFPL 511

Query: 348 SQ 349
            +
Sbjct: 512 VK 513


>gi|119384391|ref|YP_915447.1| lysine--tRNA ligase [Paracoccus denitrificans PD1222]
 gi|119374158|gb|ABL69751.1| Lysine--tRNA ligase [Paracoccus denitrificans PD1222]
          Length = 348

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 193/342 (56%), Positives = 238/342 (69%), Gaps = 1/342 (0%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
             PWW+RD H  RRP LL RN IQ+++R++     FIE D ++L  SPGNE H+ AF+T 
Sbjct: 6   ESPWWDRDRHAGRRPLLLARNRIQAAIRDWLGTQGFIEADPLALAVSPGNEAHLHAFATH 65

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            I  D + +P+YL TSPEF+ KKLLAAGEE+IF F+H WRN E+G LH PEFTMLEWYRA
Sbjct: 66  RIGNDGLAQPMYLHTSPEFAMKKLLAAGEERIFAFSHVWRNRERGALHSPEFTMLEWYRA 125

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            E Y  L  DC   +R AAEVA  ++  F+   C+P++ PE ++VAEAF  +A IDL +T
Sbjct: 126 GEDYRVLFDDCAQYLRHAAEVAGAELLRFRGAECDPYAAPEVMSVAEAFREHAGIDLLST 185

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
            D  +  D   L  QA++ GIR A DD WSDI SR L+E++EP+LG     ILDRYPA E
Sbjct: 186 CDGTE-TDTRALRAQAERQGIRTAPDDGWSDILSRALVERVEPHLGHGRPLILDRYPAAE 244

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     DPR  +RFELYAC +EL N   EL DP+EQR RFE EM+EK +IY E YP+
Sbjct: 245 AALARRAGDDPREAERFELYACGVELANGFGELTDPVEQRRRFELEMEEKARIYGECYPL 304

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DEDFLA L  MP +SG A+GFDRLVML TGA  I+EVIWTP 
Sbjct: 305 DEDFLAALAFMPAASGCALGFDRLVMLATGAPRIDEVIWTPL 346


>gi|307298991|ref|ZP_07578793.1| lysyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915416|gb|EFN45801.1| lysyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 501

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 89/372 (23%), Positives = 158/372 (42%), Gaps = 33/372 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ +   +RE+     F+E+D+ 
Sbjct: 137 IRMMPEKWHGVKDKEIIYRQRYVEMLSSDDALKRFKIRSELFRLVREFLQSKNFVEVDTP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L Y  G  +  R F T +   +     +YL+ + E   K+ L  G E+IF     +RN 
Sbjct: 197 MLHYLTGGAS-ARPFKTHI---NVFESDMYLRIAEELFLKRYLVGGFERIFEIGKNFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M     +I      +A  +I S+Q    +      
Sbjct: 253 GVSYKHHPEFTMMELYWAYADYNDIMNITEEMINFVVREIAGSEIISYQGKEIDFSRPWR 312

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + +A+       +D+    D         +    ++             +  ++     
Sbjct: 313 RVKMADFIKENLGVDILEDSD-------DRMMAVLKKHNTE-PEIKERGHLIEKLWDLV- 363

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +P   S L+ ++  D R T+RFEL   ++E+ NA  EL DPIEQ +
Sbjct: 364 --EHNLVNPTFVTEHPVIISPLSKVHREDSRVTERFELIISSMEMANAFSELNDPIEQYN 421

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  +   +     E   +D DF+  L   MP + G+ +G+DR++MLVT + +I ++I  
Sbjct: 422 RFLHQAGLRDIGDEEAQMMDHDFIRALEYGMPPTGGLGVGWDRIIMLVTDSPSIRDIIPF 481

Query: 346 PFSQS---NQEE 354
           P  +     +EE
Sbjct: 482 PLVRPISFEEEE 493


>gi|325675034|ref|ZP_08154721.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325554620|gb|EGD24295.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 506

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 146/365 (40%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               KR  +   LR       F+E+++  
Sbjct: 150 LRPMPVAHKEMSEESRVRQRYADLIIRPEARDMARKRVAVVRELRNALERRGFLEVETPM 209

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G EK+F     +RN  
Sbjct: 210 LQTLHGGAA-ARPFVTHS---NALDIDLYLRIAPELFLKRCVVGGIEKVFEINRNFRNEG 265

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y A+ +Y+   K    +++  A+ A               +E +  
Sbjct: 266 VDSTHSPEFAMLETYEAYGTYDDSAKMIRELVQEVAQAAFGTQVV----TLADGTEYDLS 321

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +    Y ++     +D         L   A+Q G+ V  D  +     +++ E  E 
Sbjct: 322 GEWKTMEMYPSLSAAIGVDVTPDTTVEELLALAEQVGLEVPKDKGYGH--GKLVEELWEH 379

Query: 229 NLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             G           +P   S L   + + P  T++++LY    EL     EL+DPI QR 
Sbjct: 380 QCGDQLFEPTFVRNFPVETSPLTRQHRSLPGVTEKWDLYVRGFELATGYSELVDPIIQRE 439

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +      +E   +DE+FLA +   MP ++G  MG DRL+M +TG   I E I  
Sbjct: 440 RFMDQARLASAGDDEAMVLDEEFLAAMEQGMPPTTGTGMGIDRLLMALTGLG-IRETILF 498

Query: 346 PFSQS 350
           P  + 
Sbjct: 499 PIVRP 503


>gi|126462891|ref|YP_001044005.1| lysine--tRNA ligase [Rhodobacter sphaeroides ATCC 17029]
 gi|126104555|gb|ABN77233.1| Lysine--tRNA ligase [Rhodobacter sphaeroides ATCC 17029]
          Length = 375

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 189/345 (54%), Positives = 231/345 (66%)

Query: 2   HQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
            ++ +  WW    H  RRP LL RN IQS+LR +     F+E+D  +LQ SPGNE H+  
Sbjct: 29  RRMSASSWWQPHRHADRRPLLLARNRIQSALRGWLGAEGFVEVDPAALQVSPGNEAHLHG 88

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F+TE I  D   + +YL TSPEF+ KKLLAAGE +I  F+H WRN E+G LH PEFTMLE
Sbjct: 89  FATEAIGNDGQGRRMYLHTSPEFAMKKLLAAGETRIAAFSHVWRNRERGVLHSPEFTMLE 148

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
           WYR  E YE LM DC   +R AAE A  +   F++  C+PF+ PE ++V EAFAR+A ID
Sbjct: 149 WYRVGEGYEVLMADCAAFLRLAAEAAGARELRFRDRTCDPFAAPERLSVVEAFARHAGID 208

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           L  T+D    PD   L     QAG+    DD WSD+ SR+L+EK+EP+LG    TILDRY
Sbjct: 209 LLATVDAQGLPDAEALRRAMVQAGLTAGADDGWSDMLSRVLVEKVEPHLGHGRPTILDRY 268

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           PA E+ALA   P D R  +RFELYAC +EL N   EL DP EQR RFE EM EK+++Y E
Sbjct: 269 PAAEAALARRAPDDARVAERFELYACGVELANGFGELTDPAEQRRRFEAEMAEKERVYGE 328

Query: 302 TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           TYP+DE+FL  L  MP +SGIAMGFDRLVML TGA  I+EVIW P
Sbjct: 329 TYPLDEEFLEALALMPPASGIAMGFDRLVMLATGAPRIDEVIWAP 373


>gi|296118958|ref|ZP_06837531.1| lysine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968056|gb|EFG81308.1| lysine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 529

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 137/371 (36%), Gaps = 25/371 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRRP---FLL--------KRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        D   R+R     L          R  +  +LR +  +  F EI++  
Sbjct: 165 LRPMPVAFADMAEDTRVRQRYNDLILREEARKNAMTRIQVIRALRHHLEDEGFNEIETPM 224

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   L+L+ +PE   K+ +  G +K+F     +RN  
Sbjct: 225 LQTLHGGAA-ARPFVTHS---NALDIDLFLRIAPELFLKRAVVGGIDKVFEINRNFRNEG 280

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF---SEP 165
               H PEF MLE Y A   Y  + K     I+  A+                       
Sbjct: 281 IDKSHSPEFAMLEIYDAWSDYNGIAKTIKESIQAVAQAVFGSHVVTLADGTEYDLGGDTW 340

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILI 223
             I +  +             +         L   A   G+ V     W    +   I  
Sbjct: 341 PEIEMYPSLNEALQKKFPGQKEVTIDSTVEELKELADVVGLEVPKGGGWGHGKLVEEIWE 400

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
              E    +     +  +P   S L   + ++P  T++++LY    EL     EL+DP+ 
Sbjct: 401 LLCEDQ--LEGPIFVKHFPVETSPLTRDHRSEPGVTEKWDLYVRGFELATGYSELVDPVI 458

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR RFE + +      +E   +DE+FL+ +   MP + G  MG DRL+M +TG   I E 
Sbjct: 459 QRERFEDQARLAADGDDEAMVLDEEFLSAMEQGMPPTGGAGMGIDRLLMALTGLG-IRET 517

Query: 343 IWTPFSQSNQE 353
           +  P  +   +
Sbjct: 518 VLFPLVKPESQ 528


>gi|295698347|ref|YP_003603002.1| lysyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157192|gb|ADD79637.1| lysyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 490

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 90/339 (26%), Positives = 168/339 (49%), Gaps = 14/339 (4%)

Query: 15  HYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK 74
           + R R   + R+ I S LR +  E  F+E+++  +Q   G  +  + F T     + ++ 
Sbjct: 160 NQRSRNTFIIRSKIISWLRCFMNEKGFMEVETPIMQPMYGGAS-AKPFMTR---HNALKS 215

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
            LYL+ +PE   K+L+  G EKIF     +RN     +H PEFTM+E+Y A+++Y  LM 
Sbjct: 216 ELYLRIAPELYLKRLVIGGFEKIFEIGKNFRNEGVSTIHNPEFTMMEFYEAYKNYLDLMD 275

Query: 135 DCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
              N+     E   +K    +     N     + +T+ ++  +    ++       D  +
Sbjct: 276 FIENLFHEIVESTLKKSGIKYGENFLNFDKRFKKVTMKQSILQ----NISNQFSMKDLEN 331

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           +  ++  A+  G++V  +D+  +I  +I  + +E    +   T +  YP   S L+    
Sbjct: 332 KDKVFTIARSYGVQVEKEDSIGEIQYKIFEKVVEKK--LIQPTFVTEYPIDVSPLSKRSR 389

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE--KKKIYNETYPIDEDFLA 311
            +P   +RFEL+    E+ N   EL DP++Q  RF ++ ++   ++  +E    D+D++ 
Sbjct: 390 ENPLVAERFELFIGGYEIANGFSELNDPVDQTSRFLQQSRKNGIRRDIDEDTFYDKDYIT 449

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            L   +P ++G+ +G DRLVML+T   +I +VI+ P  +
Sbjct: 450 SLEYGLPPTAGVGIGIDRLVMLLTNRRSIRDVIFFPALR 488


>gi|170780565|ref|YP_001708897.1| lysyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155133|emb|CAQ00233.1| lysyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 513

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 87/364 (23%), Positives = 152/364 (41%), Gaps = 29/364 (7%)

Query: 1   MHQIPSQPWWNRD-FHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+      D    R R   L            R  + +S+RE F +  ++E+++  
Sbjct: 164 LLPLPNLHSELSDETRVRSRYLDLIVRDQARKNVLDRAKVNASMRETFRQRGYVEVETPM 223

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  +  R F T     +     +YL+ +PE   K+ +  G +++F     +RN  
Sbjct: 224 LQVMHGGAS-ARPFVTHS---NAFDTEMYLRIAPELYLKRAVVGGIDRVFEINRNFRNEG 279

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--NCNPFSEPE 166
               H PEF MLE Y A+  Y  + +    +++ AA               + +   E +
Sbjct: 280 ADSTHSPEFAMLEAYEAYGDYTSIAELTQTLVQDAAMAVAGSHVVTWADGTDYDLGGEWD 339

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I++  + +  A I++              L   A + G+ V H  T   +   +    +
Sbjct: 340 RISMYASLSEAAGIEITPA------TSVDELQAIADREGVDV-HLSTHGKLVEELWEHFV 392

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +P   S L   + +     ++++LY    EL     EL+DP+ QR 
Sbjct: 393 --KGSLERPTFVLDFPVETSPLTRAHRSIEGVVEKWDLYIRGFELATGYSELVDPVVQRE 450

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + ++  +  +E  P+DE+FL  L   MP S G+ MG DRL+M +TG   I E I  
Sbjct: 451 RFVDQARQLARGDDEAMPLDEEFLRALEHGMPPSGGMGMGVDRLLMAITGLG-IRETILF 509

Query: 346 PFSQ 349
           P  +
Sbjct: 510 PLVK 513


>gi|32423704|gb|AAP81247.1| lysyl tRNA synthetase [Candidatus Portiera aleyrodidarum]
          Length = 496

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 174/368 (47%), Gaps = 27/368 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +PS+    +D   R R                  R  I S+LR++F E  F+E ++ 
Sbjct: 139 IRHLPSKFHGIKDQEIRYRHRYLDLIMNKEVRKTFKIRTRIISALRKFFYELYFLEAETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG     + F T       +   LYL+ +PE   K+L+  G E++F     +RN 
Sbjct: 199 ILHSMPGGAI-AKPFET---YNYSLNIKLYLRIAPELYLKRLVVGGFERVFEINKNFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK--IFSFQNVNCNPFSEP 165
                H PEFTMLE+Y A  +Y+ LM+   ++IR  A  A     I+  + +N +     
Sbjct: 255 GISTWHNPEFTMLEFYWAFATYKDLMEITEHMIRFVANEALGTTSIYIGKILNIDLSEPF 314

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + +++ ++  +Y       +++N D  D   L   +++ G+ VA+ + + ++ +++    
Sbjct: 315 DCLSMRDSLIKYG---KTFSINNSDFYDLENLLFLSKRIGLTVANYNNYGNLLNKLFEVI 371

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   S LA    ++   T+RFEL+    E+ N   EL D IEQ 
Sbjct: 372 VERK--LIKPTFVTDYPVEVSPLARSKDSNLNITERFELFIGGREIANGFSELNDYIEQS 429

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +RF  +++ K          D D++  L   MP ++G  +G DRLVM++T  ++I +V+ 
Sbjct: 430 NRFYLQLRNKYTYDLS--YFDMDYIRALEYGMPPTAGEGVGIDRLVMILTNKDSIRDVLL 487

Query: 345 TPFSQSNQ 352
            P  +S +
Sbjct: 488 FPLLRSRK 495


>gi|324998062|ref|ZP_08119174.1| lysyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 504

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 89/361 (24%), Positives = 150/361 (41%), Gaps = 24/361 (6%)

Query: 2   HQIPSQPWWNRD---FHYRR---------RPFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
             +P+      +      R          R  +  R+ +  ++RE   +  F+E+++  L
Sbjct: 152 RPLPTAHKELSEENRVRQRYVDLILRPQARETVRARSTVLRTVREALTDLDFVEVETPML 211

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G  T  R F T     + +   LYL+ +PE   K+ +  G E++F     +RN   
Sbjct: 212 QLLHGGAT-ARPFVTHA---NALGSDLYLRIAPELFLKRCVVGGIERVFELNRVFRNEGI 267

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEF MLE Y+A+ +Y+ +     ++I+ AA                     E+ +
Sbjct: 268 DSTHSPEFAMLEAYQAYATYDDMAVLTRDLIQSAARSLFGSTTVRHQDGTEHDLGGEWRS 327

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           V      Y ++      D     D  +L   A +  + V    T + I   +  + +E  
Sbjct: 328 VT----IYGSVSEAVGQDVTPDTDLGVLQEIAAKHDVDVTEYPTPAQIVLELFEKLVEHT 383

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  +P     L   +  DPR ++ ++L    +EL  A  EL+DP+EQR R  
Sbjct: 384 --LIEPTFVRDFPVEVRPLTRAHRDDPRLSESWDLIVFGVELATAYSELVDPVEQRERLH 441

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +  +      E   +DEDFL  +   MP + G+ MG DRL+M +TG   I E I  P  
Sbjct: 442 AQSVKAAAGDPEAMQLDEDFLRAMEYGMPPTGGMGMGVDRLLMTLTGLG-IRETILFPLV 500

Query: 349 Q 349
           +
Sbjct: 501 R 501


>gi|255263772|ref|ZP_05343114.1| lysyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255106107|gb|EET48781.1| lysyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 486

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 150/366 (40%), Gaps = 28/366 (7%)

Query: 4   IPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     D    YR R              L R+ I  ++R  F    ++E+++  L 
Sbjct: 132 MPDKHHGMSDVEAIYRARYIDLVSNQDSKDRFLARSKIVRAIRRTFEGMDYVEVETPMLH 191

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK-IFCFAHAWRNGEQ 109
              G     R F+T     + +    YL+ +PE   K+L+  G    +F     +RN   
Sbjct: 192 PISGGAA-ARPFTTHY---NALDSQFYLRIAPELYLKRLIVGGLAPGVFEINRNFRNEGV 247

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYI 168
              H PEFTMLE Y A   +E + +    I   A          ++Q    +  +  + I
Sbjct: 248 SKKHNPEFTMLEAYEAFADFETMKQRIAEICEAACVAVNGSTTATYQGTELSFKAPFQEI 307

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            +AE       ID        + PD         + G+ V  D TW +       E  E 
Sbjct: 308 EMAELIKNTLGIDFR------EIPDAAAARAAMAEKGVEVPADATWGECMEVAFDEYGEA 361

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP+  S L+     DPRF +RFE +A   E+ NA  EL DP +Q   F
Sbjct: 362 T--LIQPTHVTMYPSEISPLSKPCLDDPRFCERFESFANGWEIANAFSELNDPEKQLAIF 419

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E ++ +          +D +++A L   MP + G+ +G DRL ML+T A +I EVI  P 
Sbjct: 420 EGQVAQDASRGETEREVDYEYVAALDFAMPPTGGLGLGIDRLAMLLTDATHIKEVILFPT 479

Query: 348 SQSNQE 353
            +   +
Sbjct: 480 LRRRSD 485


>gi|284173397|ref|ZP_06387366.1| lysyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|261601707|gb|ACX91310.1| lysyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 492

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 80/332 (24%), Positives = 148/332 (44%), Gaps = 16/332 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R  +  R  I   +RE+     FIE+++  +Q   G     + F T +   +++ +  YL
Sbjct: 164 RKAMEIRYTIIREIREFLYSKGFIEVETPIVQPVYGGA-LAKPFKTHV---NYLNEDWYL 219

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + + E   K+ +  G  K+F     +RN +    H PEFT+LE Y A+  Y  +M    +
Sbjct: 220 RIALELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNPEFTLLELYWAYADYNDIMNLTED 279

Query: 139 IIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++   +   N     +     +     + I++ ++ +     D+ +  DN        L
Sbjct: 280 LLKSVVKKVTNSTKIVYGKYEIDFEGPFKRISMYDSLSEILGKDVESMSDNE-------L 332

Query: 198 YLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
               ++  +    +      +  ++  + + P   +   T +  YP   + L   +   P
Sbjct: 333 KELMKKYNLTPRGNQYVRGLMIEKLFDKLVTPT--LTNPTFITDYPIETTPLCKPHRNKP 390

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
              +RFE++   +E+ NA  EL DPI Q   F +E +  ++   E +P D+DF+  L   
Sbjct: 391 GLVERFEMFIAGMEVANAYTELNDPILQDKLFREEQEMFRRGDEEAHPYDKDFVRALSYG 450

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           MP + G+ +G DR+VMLVT   +I EVI  P 
Sbjct: 451 MPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|315654229|ref|ZP_07907137.1| lysine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315491264|gb|EFU80881.1| lysine--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 521

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 90/369 (24%), Positives = 148/369 (40%), Gaps = 31/369 (8%)

Query: 1   MHQIPSQP--------WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQF 41
           +  +P             + D   RRR             +  R+ +  +LR Y  E+ +
Sbjct: 162 LRPLPKSYINEAGEEVSLSEDMRVRRRDLDMIMRPAARDMVRNRSRVVQTLRRYLDEHDY 221

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           IE+++  LQ   G     R F T +   +     LYL+ +PE   K+ L  G +K+F   
Sbjct: 222 IEVETPMLQTLHGGAA-ARPFVTHM---NAYDTELYLRIAPELFLKRCLIGGIDKVFEIN 277

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +RN      H PEFTMLE Y A+  Y Q+ +    +I+  A               + 
Sbjct: 278 RNFRNEGADSSHSPEFTMLEVYCAYGDYHQIARLTQEMIQRCARDVFGTEVV----TLSD 333

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +E +     +    Y ++      +   +  +  L   A +  I +        I   +
Sbjct: 334 GTEFDLSGEWKWIDLYGSLSEALGQEVTVRTPKDALVALADRLDIELEPYYPSGKIVEVL 393

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E +     +   T +  +P   S L   +P  P   ++++L     E+     EL DP
Sbjct: 394 WEELVGDK--LWEPTFVCDFPEDTSPLVKTHPDKPGQVQKWDLIIRGFEVATGYSELNDP 451

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           + QR RFE++  +      E   +DEDFL  +   MP + G+ MG DRL+M +TGA  I 
Sbjct: 452 VVQRARFEQQALDAANGDPEAMEVDEDFLISMEQGMPPAGGMGMGLDRLLMTLTGAG-IR 510

Query: 341 EVIWTPFSQ 349
           E I  P  +
Sbjct: 511 ETITFPLVK 519


>gi|312138065|ref|YP_004005401.1| lysyl-tRNA ligase lyss [Rhodococcus equi 103S]
 gi|311887404|emb|CBH46716.1| lysyl-tRNA ligase LysS [Rhodococcus equi 103S]
          Length = 503

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 146/365 (40%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               KR  +   LR       F+E+++  
Sbjct: 147 LRPMPVAHKEMSEESRVRQRYADLIIRPEARDMARKRVAVVRELRNALERRGFLEVETPM 206

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G EK+F     +RN  
Sbjct: 207 LQTLHGGAA-ARPFVTHS---NALDIDLYLRIAPELFLKRCVVGGIEKVFEINRNFRNEG 262

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y A+ +Y+   K    +++  A+ A               +E +  
Sbjct: 263 VDSTHSPEFAMLETYEAYGTYDDSAKMIRELVQEVAQAAFGTQVV----TLADGTEYDLS 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +    Y ++     +D         L   A++ G+ V  D  +     +++ E  E 
Sbjct: 319 GEWKTMEMYPSLSAAIGVDVTPDTTVEELLALAERVGLEVPKDKGYGH--GKLVEELWEH 376

Query: 229 NLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             G           +P   S L   + + P  T++++LY    EL     EL+DPI QR 
Sbjct: 377 QCGDQLFEPTFVRNFPVETSPLTRQHRSLPGVTEKWDLYVRGFELATGYSELVDPIIQRE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +      +E   +DE+FLA +   MP ++G  MG DRL+M +TG   I E I  
Sbjct: 437 RFMDQARLASAGDDEAMVLDEEFLAAMEQGMPPTTGTGMGIDRLLMALTGLG-IRETILF 495

Query: 346 PFSQS 350
           P  + 
Sbjct: 496 PIVRP 500


>gi|126437708|ref|YP_001073399.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|126237508|gb|ABO00909.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 512

 Score =  285 bits (728), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 88/364 (24%), Positives = 147/364 (40%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               +R  +  +LR       F+E+++  
Sbjct: 156 LRPLPVAHKEMSEEARVRQRYVDLIVRPEARTIARQRVAVVRALRNALERRGFLELETPM 215

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ L  G EK+F     +RN  
Sbjct: 216 LQTLAGGAA-ARPFVTHS---NALDVDLYLRIAPELFLKRALVGGFEKVFELNRNFRNEG 271

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+  Y         +I+        +    + V     +  +  
Sbjct: 272 IDSTHSPEFAMLETYQAYGDYNDSAVVTRELIQE----VADEAIGTRQVPLADGTVYDLD 327

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKI 226
              E+   Y ++      +   Q     L+  A + G+ +  D       +   +    +
Sbjct: 328 GEWESLEMYPSLSAALGEEITPQTPADELWRIADRLGVEIPRDRGYGHGKLIEELWEHTV 387

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +P   + L   + + P  T++++LY    EL     EL+DPI QR 
Sbjct: 388 GE--DLWAPTFVRDFPVETTPLTRSHRSVPGVTEKWDLYVRKFELATGYSELIDPIIQRE 445

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ +      +E   +D+DFLA L   MP S+G  MG DRL+M +TG  +I E I  
Sbjct: 446 RFEEQARAAAAGDDEAMVLDDDFLAALEYGMPPSTGTGMGIDRLLMALTGL-SIRETILF 504

Query: 346 PFSQ 349
           P  +
Sbjct: 505 PIVR 508


>gi|326331872|ref|ZP_08198159.1| lysine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325950369|gb|EGD42422.1| lysine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 505

 Score =  285 bits (728), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 80/364 (21%), Positives = 143/364 (39%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P       +                 R  +  R  I  ++R    ++ ++E+++  
Sbjct: 154 LRPLPVLHKELSEESRVRQRYADLIVRQEARDMVRTRAKITQAIRRCLEDDGYLEVETPV 213

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G   H R F+T +   +   +P+ L+ + E + KK +  G +K++     +RN  
Sbjct: 214 LQLIHGGA-HARPFNTHM---NAFDQPMTLRIALELNLKKAVVGGIDKVYEIGRIFRNEG 269

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y+A+     + +    +   AA+    +    +    +   E +++
Sbjct: 270 VDSTHSPEFTMIEAYQAYGDQFTIAEQIRRMYLAAADAVGSRQIETEAGVIDLDGEWKWL 329

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            V E  +    +++          D   L   A +  + +        I   +  E +EP
Sbjct: 330 PVYEGVSEAVGVEVTPD------TDVETLKALADKHDVELDPAWNADKIVMELCGELVEP 383

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +  +   T L  +PA    LA I   +P     ++L    +E      EL+DP+ QR   
Sbjct: 384 H--LIQPTFLCDFPAIAQPLARINDEEPGKVLAWDLIIGGVERGTGFTELIDPVVQREVL 441

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +         E   +DEDFL  L    P   G+ +G DR +ML TGA  I E I  P 
Sbjct: 442 TAQSLLAAGGDPEAMQLDEDFLRALEYGAPPMGGLGLGLDRAIMLFTGAG-IRETILFPL 500

Query: 348 SQSN 351
            +  
Sbjct: 501 LKPE 504


>gi|152964545|ref|YP_001360329.1| lysyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189082961|sp|A6W5H6|SYK_KINRD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|151359062|gb|ABS02065.1| lysyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 500

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 151/365 (41%), Gaps = 25/365 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R             +  R+ +  +LR    +  F+E+++  
Sbjct: 147 LRPLPVLHKELSEETRVRQRYVDLIVREAARTNVRARSNVVRALRRTLEDRGFLEVETPM 206

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  +  R F T     +     LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 207 LQTLHGGAS-ARPFVTRS---NAFDTELYLRIAPELFLKRCVVGGIERVFEINRNFRNEG 262

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A   Y+ +      + R   + A  + F  Q V     SE +  
Sbjct: 263 ADSTHSPEFAMLETYQAWGDYDSI----GELTRALVQNAATEAFGTQLVTLADGSEYDLG 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEKIE 227
               + + Y ++      +   +  R  L   A++ GI V     T   +   +   +I 
Sbjct: 319 GEWTSISMYPSLSASLGEEITPETPREHLIGIAERLGISVDTVRWTHGKLVEELWEHRIA 378

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +  ++  T +  +P   S L   +   P   ++++LY    EL     EL+DP+ QR R
Sbjct: 379 DS--LHSPTFVRDFPVETSPLVRGHRELPGVVEKWDLYVRGFELATGYSELVDPVVQRER 436

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F ++ +      +E   IDEDFL      MP + G+ MG DRL+M +TG   I E I  P
Sbjct: 437 FVEQARLADLGDDEAMRIDEDFLRAQEHGMPPTGGMGMGIDRLLMALTGLG-IRETITFP 495

Query: 347 FSQSN 351
             +  
Sbjct: 496 LVKPR 500


>gi|71404256|ref|XP_804850.1| lysyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70868022|gb|EAN82999.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 652

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 92/359 (25%), Positives = 160/359 (44%), Gaps = 26/359 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + D  YR R             + KR+++  +LR+YF E  F+E+++  L        + 
Sbjct: 204 DNDVKYRYRFTDMMTNPCVIETIKKRHVMLQALRDYFNERNFVEVETPVLHTVASGA-NA 262

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           ++F T     +     L+L+ +PE   K+ +  G E+I+     +RN +    H PEFT 
Sbjct: 263 KSFVTH---HNANAMDLFLRVAPELHLKQCIVGGMERIYEIGKVFRNEDADRSHNPEFTS 319

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--------PEYITVA 171
            E+Y A+ +YE LM    +I R  A   N              +            ++V 
Sbjct: 320 CEFYAAYHTYEDLMPMTEDIFRQLAMRVNGTTVVQIYPENAHGNPVTVDLGKPFRRVSVY 379

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +   R + ++     +         + +   +  I +    T + +F +++   I     
Sbjct: 380 DEIQRMSGVEFPPPNELNTPKGIAYMSVVMLRYNIPLPPVRTAAKMFEKLIDFFI--TDR 437

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   T +  +P   S LA    + P   +RFEL+   IE CNA  EL DP EQ HRF+++
Sbjct: 438 VVEPTFVMDHPLFMSPLAKEQVSRPGLAERFELFVNGIEYCNAYSELNDPHEQYHRFQQQ 497

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           + +++    E  P+DE FL  L   +P ++G  MG DR +ML+T ++NI + I  P  +
Sbjct: 498 LVDRQGGDEEAMPLDETFLKSLQVGLPPTAGWGMGIDRALMLLTNSSNIRDGIIFPLLR 556


>gi|15897053|ref|NP_341658.1| lysyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|2501022|sp|P95970|SYK_SULSO RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|1707804|emb|CAA69561.1| lysyl tRNA synthetase [Sulfolobus solfataricus P2]
 gi|13813220|gb|AAK40448.1| Lysyl-tRNA synthetase (lysS) [Sulfolobus solfataricus P2]
          Length = 494

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 80/332 (24%), Positives = 148/332 (44%), Gaps = 16/332 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R  +  R  I   +RE+     FIE+++  +Q   G     + F T +   +++ +  YL
Sbjct: 166 RKAMEIRYTIIREIREFLYSKGFIEVETPIVQPVYGGA-LAKPFKTHV---NYLNEDWYL 221

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + + E   K+ +  G  K+F     +RN +    H PEFT+LE Y A+  Y  +M    +
Sbjct: 222 RIALELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNPEFTLLELYWAYADYNDIMNLTED 281

Query: 139 IIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++   +   N     +     +     + I++ ++ +     D+ +  DN        L
Sbjct: 282 LLKSVVKKVTNSTKIVYGKYEIDFEGPFKRISMYDSLSEILGKDVESMSDNE-------L 334

Query: 198 YLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
               ++  +    +      +  ++  + + P   +   T +  YP   + L   +   P
Sbjct: 335 KELMKKYNLTPRGNQYVRGLMIEKLFDKLVTPT--LTNPTFITDYPIETTPLCKPHRNKP 392

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
              +RFE++   +E+ NA  EL DPI Q   F +E +  ++   E +P D+DF+  L   
Sbjct: 393 GLVERFEMFIAGMEVANAYTELNDPILQDKLFREEQEMFRRGDEEAHPYDKDFVRALSYG 452

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           MP + G+ +G DR+VMLVT   +I EVI  P 
Sbjct: 453 MPPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 484


>gi|302207030|gb|ADL11372.1| Lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
          Length = 1111

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 155/367 (42%), Gaps = 30/367 (8%)

Query: 1    MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +  +P  P  N     + R              L R+   S++R    E  ++E ++  L
Sbjct: 755  LTPMPRVPLSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPIL 814

Query: 50   QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
            Q   G   + R F T +       + L L+ +PE   K+L+  G  ++F     +RN   
Sbjct: 815  QTIHGGA-NARPFRTHIR---AYDQNLTLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGV 870

Query: 110  GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI--FSFQNVNCNPFSEPEY 167
               H PEFT LE Y+++ +++ +      +IR AA     K    +      +       
Sbjct: 871  DSTHNPEFTSLEAYQSYGNWDTMRVLTEELIRSAAIAVYGKPEVTTADGQILDLTGSWPV 930

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            + V +A +      +    D  +  D       A++ GI  A   T  D+ + +  E IE
Sbjct: 931  VPVYDAVSEAVGKHISPDADVSEYAD------IAEKYGITAA---TVGDLVNELYDELIE 981

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            PN      T    +P   S L    P  PR  +R++L AC +EL  A  EL DP+EQ  R
Sbjct: 982  PNTVF--PTFYAGFPVETSPLTMADPDQPRIAQRWDLVACGMELGTAYTELADPLEQYAR 1039

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               +         E   +DE+FL  L   MP + G+ +G DRLVM +TG  NI EV+  P
Sbjct: 1040 LSDQSLRAAGGDAEAMELDENFLKALQFGMPPTGGLGIGIDRLVMFLTGQ-NIREVLSFP 1098

Query: 347  FSQSNQE 353
            F + + +
Sbjct: 1099 FVRPDTD 1105


>gi|300859348|ref|YP_003784331.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686802|gb|ADK29724.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|308277282|gb|ADO27181.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 1083

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 155/367 (42%), Gaps = 30/367 (8%)

Query: 1    MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +  +P  P  N     + R              L R+   S++R    E  ++E ++  L
Sbjct: 727  LTPMPRVPLSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPIL 786

Query: 50   QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
            Q   G   + R F T +       + L L+ +PE   K+L+  G  ++F     +RN   
Sbjct: 787  QTIHGGA-NARPFRTHIR---AYDQNLTLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGV 842

Query: 110  GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI--FSFQNVNCNPFSEPEY 167
               H PEFT LE Y+++ +++ +      +IR AA     K    +      +       
Sbjct: 843  DSTHNPEFTSLEAYQSYGNWDTMRVLTEELIRSAAIAVYGKPEVTTADGQILDLTGSWPV 902

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            + V +A +      +    D  +  D       A++ GI  A   T  D+ + +  E IE
Sbjct: 903  VPVYDAVSEAVGKHISPDADVSEYAD------IAEKYGITAA---TVGDLVNELYDELIE 953

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            PN      T    +P   S L    P  PR  +R++L AC +EL  A  EL DP+EQ  R
Sbjct: 954  PNTVF--PTFYAGFPVETSPLTMADPDQPRIAQRWDLVACGMELGTAYTELADPLEQYAR 1011

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               +         E   +DE+FL  L   MP + G+ +G DRLVM +TG  NI EV+  P
Sbjct: 1012 LSDQSLRAAGGDAEAMELDENFLKALQFGMPPTGGLGIGIDRLVMFLTGQ-NIREVLSFP 1070

Query: 347  FSQSNQE 353
            F + + +
Sbjct: 1071 FVRPDTD 1077


>gi|88854781|ref|ZP_01129447.1| lysyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815942|gb|EAR25798.1| lysyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 499

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 84/362 (23%), Positives = 147/362 (40%), Gaps = 29/362 (8%)

Query: 3   QIPSQPWWNRD-FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P+      D    R R             +  R  + +SLR  F  + ++E+++  LQ
Sbjct: 152 PLPNLHKDLSDEQRVRSRYLDLIVREQARFTVRARAKVNASLRATFAAHDYLEVETPMLQ 211

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G  +  R F T     +     LYL+ +PE   K+ +  G E+ F     +RN    
Sbjct: 212 TMHGGAS-ARPFVTHS---NAFDIELYLRIAPELFLKRAVVGGIERAFEINRNFRNEGAD 267

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPEYI 168
             H PEF M+E Y+A+  Y Q+      +++ +A      +          +   +   I
Sbjct: 268 STHSPEFAMVEAYQAYGDYNQMADLTQELVQNSALAVAGSMLVTLTDGTEYDLGGDWARI 327

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           ++ ++    A + +       +      L + A   GI V            +    ++P
Sbjct: 328 SMYDSLNEAAGLSVTPQTPASE------LKVLADAVGIEVTQPTH-GKYVEELWEHYVKP 380

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G++  T +  +P   S L   + +     ++++LY    EL     EL+DP+ QR RF
Sbjct: 381 --GLDHPTFVMDFPVDTSPLVRDHRSIEGVVEKWDLYVRGFELATGYSELVDPVIQRERF 438

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++     +   E   +DEDF+  L   MP + GI +G DRL+M +TG   I E I  P 
Sbjct: 439 VEQALLASQGDVEAMRLDEDFIRALEHGMPPTGGIGVGVDRLLMAITGLG-IRETILFPL 497

Query: 348 SQ 349
            +
Sbjct: 498 VK 499


>gi|314917261|gb|EFS81092.1| lysyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
          Length = 494

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 80/364 (21%), Positives = 138/364 (37%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+      +                 R  +  R +I  ++R    E  F+EI++  
Sbjct: 143 LRPLPTLHKELSEESRVRRRYADLVVREESRQMVRTRAVITRAVRRALDERGFLEIETPI 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +     + L+ + E   K+ +  G ++++     +RN  
Sbjct: 203 LQLVHGGAA-ARPFNTHL---NAFDIDMSLRIALELYLKRTMVGGTDRVYEMGRVFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF+MLE Y +  +   + +   +II   A+  +           +   +  ++
Sbjct: 259 IDSSHSAEFSMLEAYMSWGNQFTIAEVIKDIIMAVADALDVHQIETPKGTIDLDGQWRWV 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V      Y  +      +         L   A +  I +        +   +  E +EP
Sbjct: 319 SV------YPGLSEKLGREVTLDTPLEELQSIAAEHEIEIDQSWEAGKVVMELFGELVEP 372

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  YPA    LA  +  DPR  + ++L    +E      +L+DP+ QR   
Sbjct: 373 --GLINPTFVCDYPAIAQPLARPHRDDPRMVEAWDLIIGGMERGTGFSQLVDPVIQREVL 430

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K+         E   +DEDFL  L    P   G+ +G DRLVML T A  I E I  P 
Sbjct: 431 TKQSLAAAAGDPEAMQLDEDFLEALEFGCPPMGGLGLGVDRLVMLFTNAG-IRETILFPL 489

Query: 348 SQSN 351
            +  
Sbjct: 490 LKPE 493


>gi|302331589|gb|ADL21783.1| lysyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 1083

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 155/367 (42%), Gaps = 30/367 (8%)

Query: 1    MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +  +P  P  N     + R              L R+   S++R    E  ++E ++  L
Sbjct: 727  LTPMPRVPLSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPIL 786

Query: 50   QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
            Q   G   + R F T +       + L L+ +PE   K+L+  G  ++F     +RN   
Sbjct: 787  QTIHGGA-NARPFRTHIR---AYDQNLTLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGV 842

Query: 110  GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI--FSFQNVNCNPFSEPEY 167
               H PEFT LE Y+++ +++ +      +IR AA     K    +      +       
Sbjct: 843  DSTHNPEFTSLEAYQSYGNWDTMRVLTEELIRSAAIAVYGKPEVTTADGQILDLTGSWPV 902

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            + V +A +      +    D  +  D       A++ GI  A   T  D+ + +  E IE
Sbjct: 903  VPVYDAVSEAVGKHISPDADVSEYAD------IAEKYGITAA---TVGDLVNELYDELIE 953

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            PN      T    +P   S L    P  PR  +R++L AC +EL  A  EL DP+EQ  R
Sbjct: 954  PNTVF--PTFYAGFPVETSPLTMADPDQPRIAQRWDLVACGMELGTAYTELADPLEQYAR 1011

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               +         E   +DE+FL  L   MP + G+ +G DRLVM +TG  NI EV+  P
Sbjct: 1012 LSDQSLRAAGGDAEAMELDENFLKALQFGMPPTGGLGIGIDRLVMFLTGQ-NIREVLSFP 1070

Query: 347  FSQSNQE 353
            F + + +
Sbjct: 1071 FVRPDTD 1077


>gi|320104205|ref|YP_004179796.1| lysyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751487|gb|ADV63247.1| lysyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 587

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 153/367 (41%), Gaps = 34/367 (9%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +   P +     D   R R                L R+ + +S R    +  ++E+++ 
Sbjct: 238 LLPPPEKYHGLTDTELRSRMRYVDLASNPESMAAFLGRSKLVASFRSTLGDQGYVEVETP 297

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q   G     R F T     + +   L+L+ +PE   K+LL  G E++F     +RN 
Sbjct: 298 MMQAIAGGAA-ARPFVTH---HNALDLQLFLRIAPELYLKRLLVGGMERVFEIGRVFRNE 353

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPE 166
                H PEFTM+E Y+A+  Y  +M     +I  A    + +   ++     +      
Sbjct: 354 GISPKHNPEFTMMEAYQAYGDYRTMMDLTERLIVNAINALDGRFERTWNGRAIDFTPPWP 413

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T AE F  +A + +  +     +     +    ++  +          I S +  E +
Sbjct: 414 RRTYAELFEEHAGVAMEDSAGVVAKASELGIATAGKEHDV----------IVSEVFEETV 463

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  YPA    L      DPRF +RFEL+   +EL NA  EL DP  Q  
Sbjct: 464 EE--ALEGPIFVIDYPAAICPLTKRKVGDPRFAERFELFVHGMELANAYTELNDPDLQDQ 521

Query: 287 RFEKEMQ-EKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            F +++Q +K++  +    ID+DF+  L   MP + G+ +G DRL M++    +I +VI 
Sbjct: 522 LFRRQLQGQKEE--DSMARIDDDFIRALKHAMPPAGGLGIGIDRLCMVLLDKASIRDVIL 579

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 580 FPLLRPE 586


>gi|295395018|ref|ZP_06805228.1| probable lysyl-tRNA synthetase [Brevibacterium mcbrellneri ATCC
            49030]
 gi|294972085|gb|EFG47950.1| probable lysyl-tRNA synthetase [Brevibacterium mcbrellneri ATCC
            49030]
          Length = 1125

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 84/363 (23%), Positives = 147/363 (40%), Gaps = 20/363 (5%)

Query: 1    MHQIPS--QPWWNRDFHYRR----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
            +   P+   P    +    R          R  L+ R+    SLR+      ++E+++  
Sbjct: 767  IRPTPALGHPVGEEERRTNRSLDLLTDVSARDILVARSSAIRSLRDTLHAQSYMEVETPM 826

Query: 49   LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
            L    G     R F+T +   +     L L+ +PE   K+L+  G ++IF     +RN  
Sbjct: 827  LHTVHGGAA-ARPFTTHI---NAYDMDLSLRIAPELYLKRLMVGGMDRIFEIGRNFRNEG 882

Query: 109  QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                H PEFT LE Y +  +Y  + +  + +I  AA   N +  +          E    
Sbjct: 883  VDATHNPEFTSLEAYASGLTYHDMERLTIALIENAARAVNSEPVAKYRDASGKVQELYLP 942

Query: 169  TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                +   +  +      +        +   +  +AGI V  D + + +   +  E +E 
Sbjct: 943  GSWRSMTIHEAVSHAVGRELTLDTAPEVYRAECARAGIEVPTDASQAYMLMELYDELVEK 1002

Query: 229  NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                   T    +PA +S LA     D R +++++L A  +E+  A  EL+DP+ QR R 
Sbjct: 1003 QTVE--PTFYYDFPAEKSPLARPGRNDSRVSEQWDLVAFGMEVGTAYSELIDPMIQRERL 1060

Query: 289  EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             ++         E   +DE FL  L    P   G+ +G DR+VM++T A  I + +  PF
Sbjct: 1061 TEQSLAAAAGDPEAMEVDEAFLTALEMGAPPMGGLGLGVDRVVMMLT-ATTIRQTLTFPF 1119

Query: 348  SQS 350
             + 
Sbjct: 1120 LKP 1122


>gi|295395579|ref|ZP_06805773.1| lysine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971598|gb|EFG47479.1| lysine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 500

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 151/364 (41%), Gaps = 25/364 (6%)

Query: 1   MHQIPSQP--WWNRDF----------HYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P Q     +                 R  +  R+ +  SLR+ F E  F+EI++  
Sbjct: 145 IRPLPPQHTELGDEGRMRQRYLDLIMREDARKTVHIRSDVMKSLRKTFDERGFLEIETPM 204

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ  P      R FST +   +     LYL+ +PE   K+ +  G EK+F     +RN  
Sbjct: 205 LQTIPSGAA-ARPFSTHM---NAYDMELYLRIAPELFLKRAVVGGLEKVFEINRNFRNEG 260

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y A+  Y  + +    +I+ AAE A   +    +V     +E ++ 
Sbjct: 261 ADSTHSPEFAMLEAYEAYGDYSTIGELTKKLIQNAAEEATGSL----HVTLADGTEYDFG 316

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEKIE 227
                 + Y  +          +     L   A++  I V         +   +     +
Sbjct: 317 GEWATVSMYETLSEECGETVTPETTVDELLAIAKKCDIDVEGVFRGHGKLVEEMWEHFYQ 376

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S L   + + P   ++++LY    EL     EL+DP+ QR R
Sbjct: 377 DK--LWEPTFVTDFPVDTSPLVREHRSKPGVVEKWDLYVRGFELATGYSELVDPVVQRER 434

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE + +   K  +E  P+DEDFL  +   MP S G+ MG DRL+M +TG   I E I  P
Sbjct: 435 FEAQTRNAAKGDDEAMPLDEDFLTAMEFGMPPSGGMGMGIDRLLMALTGLG-IRETILFP 493

Query: 347 FSQS 350
             + 
Sbjct: 494 LVKP 497


>gi|294786597|ref|ZP_06751851.1| lysine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315226184|ref|ZP_07867972.1| lysine--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|294485430|gb|EFG33064.1| lysine--tRNA ligase [Parascardovia denticolens F0305]
 gi|315120316|gb|EFT83448.1| lysine--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 572

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 154/366 (42%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       +   R+           R  +  R  + +SLR  F +  F+E ++  
Sbjct: 215 LRPLPALHKELNEEQRTRKPYLGMIVDQKSRDMVRNRAKVVASLRRNFDQRGFLEAETPM 274

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ + G  T  R F T +   +     L+++ +PE   K++L  G +K+F     +RN  
Sbjct: 275 LQTNHGGAT-ARPFETHM---NAFDINLFMRIAPELFLKRMLVGGIDKVFEINRDFRNEG 330

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y A+ +Y+ + K   ++++ AA  A         +     +     
Sbjct: 331 ADGTHAPEFTMVEAYEAYGTYDTMAKLTQSLVQQAAIDAFGTT----ELTLVDGTPYSVG 386

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI-E 227
              ++   Y ++      +   +     L   A + G+     +    +   +      E
Sbjct: 387 GEWKSITMYGSLSEKLGEEITPETSVEHLAALADKLGVEREEVENHGKLVEHLWEHFYTE 446

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +  +   T +  +P   S L   + + P   ++++LY    EL  A  EL DP+ QR R
Sbjct: 447 DSRQLWEPTFVRDFPVETSPLTKSHRSIPGQVEKWDLYVRGFELATAYSELNDPVVQRQR 506

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  + +      +E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I  P
Sbjct: 507 FVDQAKMALAGDSEAMDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETITFP 565

Query: 347 FSQSNQ 352
             +  Q
Sbjct: 566 LVKPLQ 571


>gi|85000713|ref|XP_955075.1| lysine-tRNA ligase [Theileria annulata strain Ankara]
 gi|65303221|emb|CAI75599.1| lysine-tRNA ligase, putative [Theileria annulata]
          Length = 470

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 83/361 (22%), Positives = 156/361 (43%), Gaps = 29/361 (8%)

Query: 1   MHQIPSQP-WWNRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +H +P +    + D  +R+R             +  R+ I   LR++     F E+++  
Sbjct: 109 LHMLPDKFGLKDNDVRFRQRYLDLMMNDDSLKVMKLRSRIIDYLRKFLTSRGFFEVETPM 168

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L+ +    +  + F T     + +   L+++ +PE   K ++  G EK+F     +RN  
Sbjct: 169 LKTTSTGAS-AKPFITH---HNELDLDLFMRIAPELPLKLIIIGGFEKVFEIGKCFRNEG 224

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------CN 160
               H PEFT  E+Y A+  Y  LMK    ++         K     + +         +
Sbjct: 225 IDPTHNPEFTSCEFYWAYADYHDLMKLTEELLSSLVFELFGKYEITYHPDGPEAEGVIID 284

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                + +++ E       + L    D+ +  +++L  +  ++AG+ +      + +  +
Sbjct: 285 FTPPFQRVSMVEELENKMKMKLSPPYDSQENVEKYLTAI--KEAGLDMPKPPVPAKLIDQ 342

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           ++   IE    I   T +  +P   S L+  + +     +RFEL+ C  EL N+  EL D
Sbjct: 343 LVGHYIEDQ--IVKPTFIVDFPQCTSPLSKWHRSKENVCERFELFICGKELINSYTELND 400

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           PI QR  F+++ + K    +E  P DE F   L   +P ++G  +G DRL M ++  NNI
Sbjct: 401 PITQRECFKQQQKAKDLGDDEAQPPDEAFCTALEYGLPPTAGWGIGIDRLAMFLSDKNNI 460

Query: 340 N 340
            
Sbjct: 461 K 461


>gi|269957752|ref|YP_003327541.1| lysyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269306433|gb|ACZ31983.1| lysyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 504

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 84/364 (23%), Positives = 143/364 (39%), Gaps = 25/364 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R             +  R  +  SLRE F    FIE+++  
Sbjct: 150 LRPLPVLHKDLSEESRVRQRYVDLIARPAARDMVRLRADVVRSLRENFHRRDFIEVETPM 209

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ      T  R F+T +   +     L+++ +PE   K+ +  G E++F     +RN  
Sbjct: 210 LQTIASGAT-ARPFTTHM---NAYDMELFMRIAPELFLKRAVVGGVERVFEINRNFRNEG 265

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y A+  Y  +     N+++ AA+           +      E +  
Sbjct: 266 ADSTHSPEFAMLEAYEAYGDYNTIGALTQNLVQTAAQEVLGTTV----ITLPDGEEYDLG 321

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIE 227
                   Y ++      +   +     L    ++  + + H       +   +    + 
Sbjct: 322 GQWAQLTMYGSLSQSLGEEITPETSVEDLLKIGRRLDLELEHKAVNHGKLVETLWEHCVG 381

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +  +   T +  +P   S L   +   P   ++++LY    EL     EL+DP+ QR R
Sbjct: 382 DH--LTAPTFVRDFPVETSPLVRAHREVPGQVEKWDLYVRGFELATGYSELVDPVIQRER 439

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE +        +E   IDEDFL  +   MP + G+ MG DRL+M +TG   I E I  P
Sbjct: 440 FEAQALLAAAGDDEAMRIDEDFLVAMEHAMPPTGGMGMGLDRLLMALTGLG-IRETILFP 498

Query: 347 FSQS 350
             + 
Sbjct: 499 LVKP 502


>gi|119718566|ref|YP_925531.1| lysyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119539227|gb|ABL83844.1| lysyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 516

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 79/368 (21%), Positives = 137/368 (37%), Gaps = 25/368 (6%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P       +                 R  +  R  +  S+R    +  F+E+++  
Sbjct: 158 LRPLPVLHKELSEESRVRQRYADLIVRQEARDMVRTRAAVLRSIRSTLDDAGFVEVETPI 217

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T L   +   + + L+ + E   K+ +  G ++++     +RN  
Sbjct: 218 LQMMHGGAA-ARPFGTHL---NAFDQDMTLRIALELFLKRAVVGGVDRVYELGRIFRNEG 273

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNII--RCAAEVANQKIFSFQNVNCNPFSEPE 166
               H PEFTMLE+Y A+       +    I+    AA      +        +   E  
Sbjct: 274 VDSTHSPEFTMLEFYEAYGDQFTAAERTKAIVLNAAAAAGVGTTLVDHHGHEIDLSGEWR 333

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
           ++ +A+A +            +    +   L    +   I +       +I   +  + +
Sbjct: 334 WLPIADAVSDALG---EQISTDETADNAAALRRLGEARDIALKPTWGAGEIILELYEQLV 390

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  YP     LA  +   P   + ++L    +EL  +  EL+DP+ QR 
Sbjct: 391 EHT--LIQPTFVCDYPESVRPLARPHRTTPGLVEAWDLIIGGMELAPSYSELVDPVIQRE 448

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R  ++         E   +DEDFL  L    P   G  +G DRLVML+TG   I E I  
Sbjct: 449 RLTEQSLLAAGGDAEAMQLDEDFLRALEYGAPPMGGTGIGVDRLVMLLTGVG-IRETILF 507

Query: 346 PFSQSNQE 353
           P  +   E
Sbjct: 508 PLLKPEAE 515


>gi|258651099|ref|YP_003200255.1| lysyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258554324|gb|ACV77266.1| lysyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 504

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 87/365 (23%), Positives = 151/365 (41%), Gaps = 24/365 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R   L            R  +  SLR    +  F+E+++  
Sbjct: 151 LRPLPVAHKPLSEEARVRQRYVDLIVRPQARRTVELRAAVNRSLRATLHDRGFLEVETPM 210

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R FST +   + +   ++L+ +PE   K+    G E++F     +RN  
Sbjct: 211 LQVLHGGAA-ARPFSTHM---NALDMQVFLRIAPELYLKRAAVGGIERVFEINRNFRNEG 266

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+  Y  + +    +I+  A   +               E +  
Sbjct: 267 VDSSHSPEFAMLEAYQAYSDYNGIAELTRTLIQNVAIAVHGTTSVIHAD----GHEFDLG 322

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
               A   Y ++      +   +     L   A++ G+ VA       +   +  E +  
Sbjct: 323 GEWPAITLYGSLSEAAGREITVRTPMSELIEIAEKHGVPVAPHYGPGKLAEELFDELVVD 382

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP   S L   + ++P  T++++LY    E+     EL+DP+ QR RF
Sbjct: 383 T--LVAPTFVRDYPVETSPLTRDHRSEPGLTEKWDLYIRGTEIATGYSELVDPVIQRQRF 440

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +++ +      +E   +DE+FL  +   MP S G+ MG DRL+M +TG   I E I  PF
Sbjct: 441 QEQARFAGLGDDEAMVLDEEFLRAMEYAMPPSGGMGMGIDRLMMALTGLG-IRETILFPF 499

Query: 348 SQSNQ 352
            +  +
Sbjct: 500 VRPGE 504


>gi|260574292|ref|ZP_05842297.1| Lysine--tRNA ligase [Rhodobacter sp. SW2]
 gi|259023758|gb|EEW27049.1| Lysine--tRNA ligase [Rhodobacter sp. SW2]
          Length = 349

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 183/344 (53%), Positives = 228/344 (66%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW  + H  RRP LL RN IQ++LR +     F E+D ++LQ SPGNE H+  F+T 
Sbjct: 5   NSPWWTPERHADRRPVLLARNRIQAALRGWLAGEGFTEVDPVALQISPGNEAHLHGFATT 64

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            I  D   +P+YL TSPEF+ KKLLAAGE +I  FAH WRN E+G LH PEFTMLEWYRA
Sbjct: 65  AIGNDGAPRPMYLHTSPEFAMKKLLAAGETRIAAFAHVWRNRERGALHSPEFTMLEWYRA 124

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            E+Y  LM DC  ++R AA+ A   +  +++  C+PF  PE ++VAEAF RYA IDL  T
Sbjct: 125 GEAYTVLMDDCTAMLRLAAQTAGVTLLRYRDRTCDPFLAPERLSVAEAFLRYAGIDLLAT 184

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +     PD   L       G+R   DDTWSD+ SR+L+ K+EP+LG    TILDRYP  E
Sbjct: 185 VAADGSPDADALRAALVATGLRATTDDTWSDMLSRVLVAKVEPHLGQGRITILDRYPIAE 244

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     DPR  +RFELYAC +EL N   EL +P EQR RF  EM EK+++Y   YP+
Sbjct: 245 AALARPTADDPREAERFELYACGVELANGFGELTNPAEQRRRFGLEMDEKQRVYGHRYPL 304

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           DEDFLA L  MP +SGIAMGFDRLVML T A  I++VIW P +Q
Sbjct: 305 DEDFLAALAHMPPASGIAMGFDRLVMLATAAPRIDDVIWVPVAQ 348


>gi|296166663|ref|ZP_06849089.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897998|gb|EFG77578.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 503

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 82/365 (22%), Positives = 146/365 (40%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               +R  +  ++R       F+E+++  
Sbjct: 147 LRPLPVAHKEMSEEARVRQRYVDLIVRPQARTVARQRIAVVRAIRNALERRGFLEVETPM 206

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +K+F     +RN  
Sbjct: 207 LQTLAGGAA-ARPFVTHS---NALDIDLYLRIAPELFLKRCVVGGFDKVFEVNRVFRNEG 262

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF+MLE Y+A+ +Y+        +I+        +    + +     S  +  
Sbjct: 263 ADSTHSPEFSMLETYQAYGTYDDSAVVTRELIQE----VADEAIGTRQLPLPDGSVYDIH 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKI 226
               +   Y ++      +   Q     L+  A + G+ +  D       +   +    +
Sbjct: 319 GEWASIQMYPSLSAALGEEITPQTPVERLWAIAHRLGVEIPEDRGYGHGKLVEELWEHTV 378

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +P   + L   + + P  T++++LY   IEL     EL DP+ QR 
Sbjct: 379 GDT--LTAPTFVRDFPVETTPLTRQHRSIPGVTEKWDLYVRGIELATGYSELNDPVVQRE 436

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +      +E   +DEDFLA L   MP  +G  MG DRL+M +TG  +I E +  
Sbjct: 437 RFAAQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTGL-SIRETVLF 495

Query: 346 PFSQS 350
           P  + 
Sbjct: 496 PIVRP 500


>gi|332796362|ref|YP_004457862.1| lysyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694097|gb|AEE93564.1| lysyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 494

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 150/340 (44%), Gaps = 19/340 (5%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            R  +  R      +R+Y     FIE+++  LQ   G     + F +++   +++ +  Y
Sbjct: 163 SRKAMEIRFKTIKEIRDYLNSKGFIEVETPILQPVYGGA-LAKPFKSKV---NYLNEEWY 218

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L+ S E   K+ +  G +K+F     +RN +    H PEFT LE Y A+  Y  +MK   
Sbjct: 219 LRISLELYLKRFIVGGFDKVFEIGKVFRNEDIDVTHNPEFTELELYWAYADYNDIMKLTE 278

Query: 138 NIIRCAAEVANQ----KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++++            K            S+   IT+ ++ +     D+    D      
Sbjct: 279 DMLKTVVSKVLGDNKLKYKVADKEYEIELSQFRKITMFDSLSEALGKDVEKMTD------ 332

Query: 194 RHLLYLQAQQAG-IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
              L    ++ G I   +      +  ++  + + PN  +   T +  YP   + L   +
Sbjct: 333 -DELKELMKKYGLIPRGNLYVRGLMIEKLFDKLVTPN--LIQPTFITDYPIETTPLCKPH 389

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
            + P   +RFELY   +EL NA  EL DPI Q   F++E +  K+   E +P D+DF+  
Sbjct: 390 RSKPGLVERFELYIAGMELANAYTELNDPILQDKLFKEEQEMMKRGDEEAHPYDKDFVRA 449

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           L   MP + G+ +G DRLVML+T   +I EVI  P   + 
Sbjct: 450 LSYGMPPTGGLGIGIDRLVMLLTNNQSIKEVIPFPMLSAK 489


>gi|182413900|ref|YP_001818966.1| lysyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177841114|gb|ACB75366.1| lysyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 500

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 90/371 (24%), Positives = 151/371 (40%), Gaps = 39/371 (10%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R             L+ R+ I S +R +     FIE+++ 
Sbjct: 140 LRPLPEKFHGLSDPEQVYRQRYLDVIMNQESRARLMLRSRIVSHVRRFLEGRSFIEVETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L+ + G     R F T     + +    +L+ + E   K++L  G +++F     +RN 
Sbjct: 200 VLEATAGGAA-ARPFVTH---HNALNVDFFLRIATELRLKRMLVGGFDRVFEIGRIFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMN-------IIRCAAEVANQKIFSFQNVNCN 160
                H PEFTMLE Y+A+  Y  +M    +        I   A+ + +   S      +
Sbjct: 256 GVSRRHNPEFTMLEVYQAYSDYRGMMTLIRDLLTSLVRDIVKPADGSLKIKHSASGQEID 315

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
              E   +   +            +        +     +A+  G+++       +I + 
Sbjct: 316 FGGEWREVRYKDLIKEVTGDAEWFSRS------KAEKIAKAEAMGLQIHPGWEEFEITNE 369

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           I  +KIEP   +   T +   P     LA +   DP     FEL    +E+  A  E  D
Sbjct: 370 IFSKKIEPT--LIQPTFVTHLPKELCPLAKLNAEDPSVLDVFELTIGGMEVAPAYSEQND 427

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P  QR  FEK+         E   ID+DFL  L   MP + G+ +G DRL +L+TGA +I
Sbjct: 428 PDVQREMFEKQA------GEEKQNIDQDFLLALEHGMPPAGGMGVGIDRLCILLTGAESI 481

Query: 340 NEVIWTPFSQS 350
            +VI  P  + 
Sbjct: 482 RDVILFPQLRP 492


>gi|291295875|ref|YP_003507273.1| lysyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470834|gb|ADD28253.1| lysyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 502

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 87/371 (23%), Positives = 150/371 (40%), Gaps = 31/371 (8%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +    RD    YR+R                R+ +   +R++F +  F+E++  
Sbjct: 136 LHPLPDKWHGIRDVETRYRQRYLDLIQNPEVREVFRIRSRMVRYIRDFFDQRGFLEVEGP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +LQ   G  T  + F T     + +     L+ + E   K+LL  G EK+F     +RN 
Sbjct: 196 TLQAIAGG-TEAKPFKT---FHNALDHEFNLRIALELHLKRLLVGGFEKVFEIGRNYRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y  +M    +++    +         +     +     +
Sbjct: 252 GISVKHNPEFTMLEAYWAYADYHDMMALVEDLLSGLVQHLFGSTQVQYGEHLIDFAKPFK 311

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I         A +D        D  D   L   A Q    +        +  ++    +
Sbjct: 312 RIDFVATLKERAGLDF-------DPTDLERLRTWADQKHPELR-SVPSYKLLDKLFGHYV 363

Query: 227 EPNLGINCCTILDRYPAPESALANIYPA--DPRFTKRFELYACNIELCNACDELLDPIEQ 284
           E    +   T +   P   S L   +        T+R +L+    E+     EL D ++Q
Sbjct: 364 EHT--LIQPTFVVDVPLAISPLVKRHRDPSKTNLTERADLFVAGFEISPIYSELNDALDQ 421

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RF+++ + ++   +E   IDEDFL  L   MP ++G+ +G DRL M++T   +I +VI
Sbjct: 422 RARFQEQAKRREAGDDEEPEIDEDFLLALEYGMPPAAGMGLGIDRLAMVLTNQESIRDVI 481

Query: 344 WTPFSQSNQEE 354
             P  +  +E 
Sbjct: 482 LFPLLKPRKEA 492


>gi|297625418|ref|YP_003687181.1| Lysyl-tRNA synthetase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921183|emb|CBL55732.1| Lysyl-tRNA synthetase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 535

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 80/363 (22%), Positives = 140/363 (38%), Gaps = 26/363 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       +   R+R             + +R +I   +RE   E  ++E+++  
Sbjct: 184 LRPLPTLHNDLSEEARVRQRYNDLIVRPAARTMVRQRALITRKIRETLEEQGYLEVETPV 243

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +     +YL+ + E   K+++  G ++++     +RN  
Sbjct: 244 LQSVHGGAA-ARPFTTHL---NAFDIDMYLRIALELHLKRVMVGGADRVYEMGRVFRNEG 299

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTMLE Y++      + +   +II   AE  +           +   E  ++
Sbjct: 300 VDSSHSPEFTMLEAYQSWGDQFTIAETLKSIIMKVAEALDIFEIPTDQGVIDLKGEWIWL 359

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            V E       +      +   +     L   A    +          +   +  E +E 
Sbjct: 360 PVYE------GLSGEVGEEITTKTPVEHLRHIADAHKVDYDASWIDQKMVLHLFEELVEK 413

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T +  +P     LA  + + P   + ++L    +E      EL+DP+ QR   
Sbjct: 414 --GLTQPTFVCDFPEIAQPLARRHRSKPGCIEAWDLIIGGMERGTGFSELIDPVIQREIL 471

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++         E   +DEDFL  L    P   G+ +G DRLVML TGA  I E I  P 
Sbjct: 472 TQQSLAAAAGDPEAMQLDEDFLNALEQGCPPMGGLGLGVDRLVMLFTGAG-IRETILFPL 530

Query: 348 SQS 350
            + 
Sbjct: 531 LRP 533


>gi|255086717|ref|XP_002509325.1| predicted protein [Micromonas sp. RCC299]
 gi|226524603|gb|ACO70583.1| predicted protein [Micromonas sp. RCC299]
          Length = 566

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 154/379 (40%), Gaps = 34/379 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R  I S +R +  +  F+E+++ 
Sbjct: 193 LLPLPDKFKGLTDVEMRYRQRYVDLIANPEVRDTFRARAGIVSGIRRFLDDRAFMEMETP 252

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L+   G     + F+T     + +   L L+ + E   K+L+  G E+++     +RN 
Sbjct: 253 VLETRAGGA-DAKPFNT---FHNALGMNLTLRIATELHLKRLVVGGFERVYEMGRIFRNE 308

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF---SE 164
                H PEFT +E Y+A+     +++    +I    E AN      Q  +         
Sbjct: 309 GISTRHNPEFTSVEVYQAYADVSDMLELTEEMICYCCERANGGALKIQYGDELIDLGQRP 368

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT----------W 214
                + +     A +D+     +           +A    +      +           
Sbjct: 369 WRRAPMNDLVKEAAGVDVMGDYGHNGDLAGAKAAAEAALRALGDKESMSGIPGVQQAPSV 428

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
             + + +    +E    +   T +  +P   S LA  + A P  T+RFEL+    EL N+
Sbjct: 429 GHVLNEMFEATVETK--LRQPTFVLDHPVEISPLAKPHRAKPGVTERFELFIVGRELANS 486

Query: 275 CDELLDPIEQRHRFEKEMQE-KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
             EL DP++QR R E +++  + +       +DEDF+  L   MP ++G+ +G DRLVML
Sbjct: 487 FSELTDPVDQRTRLESQIETHRYEAELYPIAMDEDFVTALEYGMPPTAGMGLGVDRLVML 546

Query: 333 VTGANNINEVIWTPFSQSN 351
           +T + +I +VI  P  +S 
Sbjct: 547 LTNSASIRDVIAFPLLKSQ 565


>gi|116668733|ref|YP_829666.1| lysyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116608842|gb|ABK01566.1| lysyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 510

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 86/365 (23%), Positives = 138/365 (37%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R             +  R  I  S+RE      ++E+++  
Sbjct: 157 LRPLPVLHAGLNEETRVRQRYVDLMVRDEAREMVYTRAAITRSIRESLHRRNYVEVETPM 216

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T +   +   + + L+ + E   K+ +  G ++++     +RN  
Sbjct: 217 LQLVHGGA-LARPFETHM---NAFDQKMTLRIATELYLKRAVVGGIDRVYDMGRVFRNEG 272

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEY 167
               H PEFT LE Y A      +      II  AA+ A   +    +    N   E  +
Sbjct: 273 VDSTHSPEFTTLECYEAWADQFVMADRIKEIILDAADAAGVGRTIQTEAGEINLDGEWTW 332

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +      A Y  +      +         L   A +  ++V        +   +  E +E
Sbjct: 333 L------AVYPGLSDAVGQEITPDTTVEELRAVAAKHDVKVDPKWDAEKLAVELFGEIVE 386

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P   +   T +  YP     LA  +  D R  + ++L    +E   A  EL+DP+ QR R
Sbjct: 387 PT--LLNPTFVYDYPPSAQPLARQHRNDDRLIEAWDLIIGGMERGTAFSELIDPVIQRER 444

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             ++         E   +DEDFL  L    P   GI +G DRLVML TGA  I E I  P
Sbjct: 445 LTEQSMHAAAGDVEAMQLDEDFLRALEYGAPPMGGIGLGIDRLVMLFTGAG-IRETILFP 503

Query: 347 FSQSN 351
             +  
Sbjct: 504 LLKPE 508


>gi|227547917|ref|ZP_03977966.1| lysyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227080002|gb|EEI17965.1| lysyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 520

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 88/368 (23%), Positives = 147/368 (39%), Gaps = 24/368 (6%)

Query: 1   MHQIPSQPWW-NRDFHYRRRPF-LLKRN----------MIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R R   L+ R+           + +++R+Y     F+E+++  
Sbjct: 158 LRPLPVAFAEMNEEQRVRHRYTDLIMRSAARDNAMTRIKVIAAVRKYLTGLDFVEVETPM 217

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 218 LQTLHGGAA-ARPFVTRS---NALDIDLYLRIAPELYLKRCVVGGIERVFEINRNFRNEG 273

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTMLE Y+A  +Y    K    +++  AE                +   E +
Sbjct: 274 VDSSHSPEFTMLETYQAWGTYADGAKMMKGLVQFCAEEVFGSQKVTLADGTEYDFSGEWK 333

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIE 224
            + +  +             +         L   A   G++V  +  W    +   I  E
Sbjct: 334 VLQMYPSLNEALARKFPGQPEVTIDSSVEELTAVAGAIGLKVPANAGWLHGKLVEEIWEE 393

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
                  +   T +  +P   S L   +   P  T++++LY    EL     EL+DP+ Q
Sbjct: 394 LCSDQ--LYEPTFVTNFPVETSPLTRDHRDQPGVTEKWDLYIRGFELATGYSELVDPVIQ 451

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RF  + +      +E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E +
Sbjct: 452 RERFVDQARLAAHGDDEAMVLDEDFLAAMEQGMPPTAGTGMGVDRLLMALTGLG-IRETV 510

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 511 LFPMVKPE 518


>gi|269302722|gb|ACZ32822.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 527

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 92/372 (24%), Positives = 167/372 (44%), Gaps = 33/372 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I   +R Y   + F+E+++ 
Sbjct: 158 LLSLPDKHAGLSDKEVRYRKRWLDLISSREVSDTFVKRSYIIKLIRNYMDAHGFLEVETP 217

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     + F+T++   + +   ++L+ S E + KK+L  G  +I+     +RN 
Sbjct: 218 ILQNIYGGA-EAKPFTTKM---EALHSEMFLRISLEIALKKILVGGAPRIYELGKVFRNE 273

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-------IFSFQNVNCN 160
                H PEFTM+E Y A+  Y+++M    N++       N          +       +
Sbjct: 274 GIDRTHNPEFTMIEAYAAYMDYQEVMVFVENLVEHLVRAVNHDNTSLVYSHWKHGPQEVD 333

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +    +T+ E+ A YA ID+    D   +          + A    +     + +F  
Sbjct: 334 FKAPWIRMTMKESIATYAGIDVDVHSDQKLKEILKKKTTLPETAFATASRGMLIAALFDE 393

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELL 279
           ++ +       +     +  +P   + L     + D  F +RFE +    ELCNA  EL 
Sbjct: 394 LVSD------NLIAPHHITDHPVETTPLCKTLRSGDTAFVERFESFCLGKELCNAYSELN 447

Query: 280 DPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
           DPI QR   E++  +K+ +  +E +PIDE+FL  L   MP + G  +G DRLVM++T A 
Sbjct: 448 DPIRQRELLEQQHTKKELLPDSECHPIDEEFLEALCQGMPPAGGFGIGVDRLVMILTNAA 507

Query: 338 NINEVIWTPFSQ 349
           +I +V++ P  +
Sbjct: 508 SIRDVLYFPVMR 519


>gi|71656145|ref|XP_816624.1| lysyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70881765|gb|EAN94773.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 659

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 91/359 (25%), Positives = 159/359 (44%), Gaps = 26/359 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + D  YR R             + KR+++  +LR+YF E  F+E+++  L        + 
Sbjct: 211 DNDVKYRYRFTDMMTNPCVIETIKKRHVMLQALRDYFNERNFVEVETPVLHTVASGA-NA 269

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           ++F T     +     L+L+ +PE   K+ +  G E+I+     +RN +    H PEFT 
Sbjct: 270 KSFVTH---HNANAMDLFLRVAPELHLKQCIVGGMERIYEIGKVFRNEDADRSHNPEFTS 326

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--------PEYITVA 171
            E+Y A+ +YE LM    +I    A   N              +            ++V 
Sbjct: 327 CEFYAAYHTYEDLMPMTEDIFLQLAMRVNGTTVVQIYPENAHGNPVTVDLGKPFRRVSVY 386

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +   R + ++     +         + +   +  I +    T + +F +++   I     
Sbjct: 387 DEIQRMSGVEFPPPNELNTPKGIAYMSVVMLRYNIPLPPVRTAAKMFEKLIDFFI--TDR 444

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   T +  +P   S LA    + P   +RFEL+   IE CNA  EL DP EQ HRF+++
Sbjct: 445 VVEPTFVMDHPLFMSPLAKEQVSRPGLAERFELFVNGIEYCNAYSELNDPHEQYHRFQQQ 504

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           + +++    E  P+DE FL  L   +P ++G  MG DR +ML+T ++NI + I  P  +
Sbjct: 505 LVDRQGGDEEAMPLDETFLKSLQVGLPPTAGWGMGIDRALMLLTNSSNIRDGIIFPLLR 563


>gi|296437261|gb|ADH19431.1| lysyl-tRNA synthetase [Chlamydia trachomatis G/11222]
          Length = 526

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 92/369 (24%), Positives = 163/369 (44%), Gaps = 33/369 (8%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R              L R+ I   +REY  +  F+E+++  LQ
Sbjct: 161 LPDKHAGLADKEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQ 220

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G       F T L     +   ++L+ S E + KKLL  G  +++     +RN    
Sbjct: 221 TIYGGA-EATPFVTTLQ---ALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGID 276

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-------QKIFSFQNVNCNPFS 163
             H PEFTM+E Y A+  Y  +MK   N+I       N                  +  +
Sbjct: 277 RTHNPEFTMIEAYAAYWDYNDVMKCVENLIEYIVRALNNGETQVQYSHLKSGPQVVDFKA 336

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +T+ E+ + Y  +D+    D+  +          ++  +  +  +  + +F  ++ 
Sbjct: 337 PWIRMTMKESISVYGGVDVDLHADHELRKILETQTSLPEKTYVHASRGELIALLFDELVC 396

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPI 282
           +K      +     +  +P   + L     + D    +RFE +    ELCNA  EL DP+
Sbjct: 397 DK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESFCLGKELCNAYSELNDPL 450

Query: 283 EQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +QR   E++M++K     +E +PIDE+FL  L   MP + G  +G DRLVM++T A +I 
Sbjct: 451 QQRKLLEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIR 510

Query: 341 EVIWTPFSQ 349
           +V++ P  +
Sbjct: 511 DVLFFPVMR 519


>gi|15834783|ref|NP_296542.1| lysyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270284950|ref|ZP_06194344.1| lysyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270288976|ref|ZP_06195278.1| lysyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336348|ref|ZP_07224550.1| lysyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|11387148|sp|Q9PLE1|SYK_CHLMU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|7190200|gb|AAF39039.1| lysyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 524

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 90/369 (24%), Positives = 163/369 (44%), Gaps = 33/369 (8%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R              L R+ I   +REY  +  F+E+++  LQ
Sbjct: 161 LPDKHSGLADKEIRYRKRWADLISSEEVRKTFLARSRILKLIREYMDQQDFLEVETPVLQ 220

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G       F T L     +   ++L+ S E + KK+L  G  +++     +RN    
Sbjct: 221 TIYGGA-EATPFVTTLK---ALHTEMFLRISLEIALKKILVGGMSRVYEIGKVFRNEGID 276

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-------QKIFSFQNVNCNPFS 163
             H PEFTM+E Y A+  Y  +MK   N++       N                  +  +
Sbjct: 277 RTHNPEFTMIEAYAAYWDYNDVMKCVENLVEYVVRALNNGETKVQYSHLKSGPQIVDFKA 336

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +T+ E+ + Y  +D+    ++  +          ++A +     +  + +F  ++ 
Sbjct: 337 PWIRMTMKESISVYGGVDVDQYSEHELRDILKTRTALPEKAYVSATRGEMIALLFDELVC 396

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPI 282
           +K      +     +  +P   + L     + D    +RFE +    ELCNA  EL DP+
Sbjct: 397 DK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESFCLGKELCNAYSELNDPL 450

Query: 283 EQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +QR   E++M++K     +E +PIDE+FL  L   MP + G  +G DRLVM++T A +I 
Sbjct: 451 QQRKLLEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIR 510

Query: 341 EVIWTPFSQ 349
           +V++ P  +
Sbjct: 511 DVLYFPVMR 519


>gi|227497075|ref|ZP_03927324.1| lysine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226833440|gb|EEH65823.1| lysine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 558

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 90/369 (24%), Positives = 146/369 (39%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWNR--------DFHYRRRP-----------FLLKRNMIQSSLREYFVENQF 41
           +  +P     ++        D   RRR             +  R  +  SLRE F    +
Sbjct: 195 LRPLPKTWTNDKGETVSLSEDNRVRRRELDLLTRPAARDMVRTRAAVVRSLRENFHRRDY 254

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           +E+++  LQ   G     R F T +   +     LYL+ + E   K+ +  G +++F   
Sbjct: 255 LELETPMLQVIHGGAA-ARPFVTHM---NAFDMDLYLRIATEIYLKRAVVGGVDRVFEIN 310

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +RN      H PEF  LE Y A+  Y  + +   N+++ AA  A       + V    
Sbjct: 311 RNFRNEGADSSHSPEFAALEAYEAYSDYNGMAELTRNLVQQAARDAFGLEEGKEVVTLAD 370

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +E +     +    Y ++      +   +  R  L   A++  + V        I   I
Sbjct: 371 GTEYDLSGEWDKIDLYTSVSNAVGEEITVETPREHLVALAEKLDLEVDDFAVAGKIVEDI 430

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E +     +   T +  +P   S L   + + P  T++++LY    EL  A  EL DP
Sbjct: 431 FEETVGNK--LWAPTFVYDFPEDTSPLTRYHRSKPGLTEKWDLYVRGFELGTAYSELADP 488

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           + QR RFE +         E   +DEDFL  +    P   G+ MG DRL+M +TG   I 
Sbjct: 489 VVQRERFEAQALAAANGDPEAMVLDEDFLVAMEQGFPPCGGMGMGIDRLLMALTGQG-IR 547

Query: 341 EVIWTPFSQ 349
           E I  P  +
Sbjct: 548 ETITFPLVK 556


>gi|38234687|ref|NP_940454.1| lysyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|38200951|emb|CAE50668.1| Putative integral membrane protein/lysyl-tRNA synthetase fusion
            [Corynebacterium diphtheriae]
          Length = 1049

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 156/365 (42%), Gaps = 30/365 (8%)

Query: 1    MHQIPSQPWWNRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +  +P Q   N     +            R     R+   +++R   V   ++E ++  L
Sbjct: 698  LVPMPRQASRNPHTRAKFRHIDFTMNSQARSIFSARSRAITAVRSVLVSQGYLEAETPIL 757

Query: 50   QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
            Q   G   + R F T +       +PL L+ +PE   K+L+  G E++F     +RN   
Sbjct: 758  QTIHGGA-NARPFRTHIR---AYDQPLTLRIAPELYLKRLVVGGFERVFEMGRNFRNEGV 813

Query: 110  GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF--SFQNVNCNPFSEPEY 167
               H PEFT LE Y+A+ +++ + +   NIIR AA   +      +      +       
Sbjct: 814  DATHNPEFTSLEAYQAYGNWDTMRELTENIIRSAAIAVHGSPQVTTASGEVLDLSGSWPV 873

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            + V EA +R     +  +    D          AQ+  I      T  D+ + +  E +E
Sbjct: 874  VPVYEAVSRAVGETISPSGSLADYAH------IAQRYDIEAT---TVGDLVNELYDELVE 924

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            P       T    +P   S L    P +PR  +R++L AC +EL  A  EL DPIEQR R
Sbjct: 925  PTTVF--PTFYAGFPVETSPLTMADPDEPRIAQRWDLVACGMELGTAYTELADPIEQRAR 982

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               +         E   +DE+FL  L   MP + G+ +G DRLVM +TG  NI EV+  P
Sbjct: 983  LTDQSLRAAGGDAEAMELDENFLQALEFGMPPTGGLGIGIDRLVMFLTGQ-NIREVLAFP 1041

Query: 347  FSQSN 351
            F + +
Sbjct: 1042 FVKPD 1046


>gi|329943177|ref|ZP_08291951.1| lysyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287759|ref|YP_004422660.1| lysyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313848331|emb|CBY17334.1| putative lysyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325507194|gb|ADZ18832.1| lysyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328814724|gb|EGF84714.1| lysyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328915015|gb|AEB55848.1| lysyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 526

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 162/369 (43%), Gaps = 33/369 (8%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R              LKR+ I   +R Y     FIE+++  LQ
Sbjct: 161 LPDKHAGLSDKEIRYRKRWLDLISSDEVRQTFLKRSRIIKLIRHYMDAQGFIEVETPILQ 220

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G       F T L   + +   ++L+ SPE S KK+L  G  +I+     +RN    
Sbjct: 221 NVYGGA-EATPFITTL---NALHSEVFLRISPEISLKKVLVGGTPRIYEIGKVFRNEGID 276

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-------QKIFSFQNVNCNPFS 163
             H PEFT++E Y  +  Y  +M    N++       N               V+ +  +
Sbjct: 277 RTHNPEFTIMEAYATNIDYHSVMTYVENLVEHLVCELNNGSTVLTYSHLKQGPVSIDFKA 336

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +T+ ++   Y  +D+    D+  +      +   +++ +        + +F  ++ 
Sbjct: 337 PWIRMTMKDSIKTYGGVDVDLHGDHELRKILKECFSLPEESYVTAPRGLLIAALFDELVC 396

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPI 282
           +K      +     +  +P   + L     + D  F +RFE +    ELCNA  EL DP+
Sbjct: 397 DK------LIAPHHITDHPVETTPLCKSLRSGDGDFVERFESFCLGKELCNAYSELNDPL 450

Query: 283 EQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
            QR   EK+ ++K     +E +PIDE+FL  L   +P + G  +G DRLVM++T A +I 
Sbjct: 451 RQRVLLEKQQEKKALDPDSEYHPIDEEFLEALCQGLPPTGGFGIGIDRLVMILTDAASIR 510

Query: 341 EVIWTPFSQ 349
           +V++ P  +
Sbjct: 511 DVLYFPAMR 519


>gi|84497266|ref|ZP_00996088.1| lysyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84382154|gb|EAP98036.1| lysyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 509

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 84/364 (23%), Positives = 141/364 (38%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P       +                 R  +  +  I S++R       ++E+++  
Sbjct: 158 LRPMPVLHKELSEESRVRQRYADLIVRQEARDMVRTKAKIYSAMRHELERQGYLEVETPI 217

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T L   +   + + L+ + E + KK +  G ++++     +RN  
Sbjct: 218 LQLIHGGAA-ARPFKTHL---NAFDQEMTLRIALELNLKKAVVGGVDRVYEMGRIFRNEG 273

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTMLE Y+A      + +   ++   AA+    +         +   E  ++
Sbjct: 274 VDATHSPEFTMLEAYQAWGDQTTIAQLLKDVYLAAADAIGSRQIETDKGTIDLDGEWRWL 333

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            V +A +      +          D   L   A +  + +        +F  +L E +EP
Sbjct: 334 PVYDAVSEAVGETVNVD------TDLETLRAHAAKHEVTIDPAWDKDKVFLELLGELVEP 387

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+   T L  YPA    LA  + ++P   + ++L    +E      EL+DP+ QR   
Sbjct: 388 --GLLQPTFLCDYPAIAQPLARPHRSEPGLIEAWDLIIGGVERGTGFSELIDPVIQRKVL 445

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E +  +      E   +DEDFL  L    P   GI  G DRLVML T   NI E I  P 
Sbjct: 446 EDQSLKAAGGDPEAMQLDEDFLRALEYGAPPMGGIGFGVDRLVMLFTDV-NIRETILFPH 504

Query: 348 SQSN 351
            +  
Sbjct: 505 LKPE 508


>gi|255311616|ref|ZP_05354186.1| lysyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317917|ref|ZP_05359163.1| lysyl-tRNA synthetase [Chlamydia trachomatis 6276s]
          Length = 526

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 92/369 (24%), Positives = 163/369 (44%), Gaps = 33/369 (8%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R              L R+ I   +REY  +  F+E+++  LQ
Sbjct: 161 LPDKHAGLADKEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQ 220

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G       F T L     +   ++L+ S E + KKLL  G  +++     +RN    
Sbjct: 221 TIYGGA-EATPFVTTLQ---ALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGID 276

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-------QKIFSFQNVNCNPFS 163
             H PEFTM+E Y A+  Y  +MK   N+I       N                  +  +
Sbjct: 277 RTHNPEFTMIEAYAAYWDYNDVMKCVENLIEYIVRALNNGETQVQYSHLKSGPQVVDFKA 336

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +T+ E+ + Y  +D+    D+  +          ++  +  +  +  + +F  ++ 
Sbjct: 337 PWIRMTMKESISVYGGVDVDLHADHELRKILETQTSLPEKTYVHASRGELIALLFDELVC 396

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPI 282
           +K      +     +  +P   + L     + D    +RFE +    ELCNA  EL DP+
Sbjct: 397 DK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESFCLGKELCNAYSELNDPL 450

Query: 283 EQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +QR   E++M++K     +E +PIDE+FL  L   MP + G  +G DRLVM++T A +I 
Sbjct: 451 QQRKLLEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIR 510

Query: 341 EVIWTPFSQ 349
           +V++ P  +
Sbjct: 511 DVLFFPVMR 519


>gi|283778438|ref|YP_003369193.1| lysyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283436891|gb|ADB15333.1| lysyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 528

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 148/366 (40%), Gaps = 32/366 (8%)

Query: 3   QIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
             P +     + +  +R R              L R  I  S+R    E  F EI+  +L
Sbjct: 180 PPPDKHKGLTDPELRHRMRYVDLQTTDGVLQRFLDRTKIVRSIRSTLTEQGFCEIEGPTL 239

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G     R F+T     + +   L+L+ + E   K+LL  G E++F     +RN   
Sbjct: 240 HAIAGGAA-ARPFTTH---HNALNIDLFLRIALELHLKRLLVGGMERVFELGRVYRNEGL 295

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPEYI 168
              H PEFTMLE Y+A+  Y  +M    +II  A    + K    +     +        
Sbjct: 296 SPRHNPEFTMLEVYQAYGDYRSMMDLTESIICNAIRATDGKFVRPWGEKTIDFTPPFARK 355

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T  E FA +A +D           D   +   A++ G   A       I S +  EK+E 
Sbjct: 356 TYDELFAEHAGVDPS---------DAAAVKALAEKLGFDTA-GKHPDVIKSEVFEEKVED 405

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +     +  YPA    L       P   +RFEL+   +E+ NA  EL DP  Q   F
Sbjct: 406 --ALVGPIFVTDYPASICPLTKRKREKPEVAERFELFVYGMEVANAYTELNDPDLQDQLF 463

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             ++    +  +    +D DF+  L   MP + G+ +G DRLVML+T   +I EVI  P 
Sbjct: 464 RTQLDGMAEEDSMA-KMDHDFIRALKHGMPPAGGLGIGIDRLVMLLTNTASIREVILFPL 522

Query: 348 SQSNQE 353
            +  QE
Sbjct: 523 LRPEQE 528


>gi|255349179|ref|ZP_05381186.1| lysyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503716|ref|ZP_05382106.1| lysyl-tRNA synthetase [Chlamydia trachomatis 70s]
 gi|255507397|ref|ZP_05383036.1| lysyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525825|emb|CBJ15306.1| lysyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435405|gb|ADH17583.1| lysyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296439122|gb|ADH21275.1| lysyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 526

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 163/369 (44%), Gaps = 33/369 (8%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R              L R+ I   +REY  +  F+E+++  LQ
Sbjct: 161 LPDKHAGLADKEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQ 220

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G       F T L     +   ++L+ S E + KKLL  G  +++     +RN    
Sbjct: 221 TIYGGA-EATPFVTTLQ---ALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGID 276

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-------QKIFSFQNVNCNPFS 163
             H PEFTM+E Y A+  Y  +MK   N++       N                  +  +
Sbjct: 277 RTHNPEFTMIEAYAAYWDYNDVMKCVENLVEYIVRALNNGETQVQYSHLKSGPQVVDFKA 336

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +T+ E+ + Y  +D+    D+  +          ++  +  +  +  + +F  ++ 
Sbjct: 337 PWIRMTMKESISVYGGVDVDLHADHELRKILETQTSLPEKTYVHASRGELIALLFDELVC 396

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPI 282
           +K      +     +  +P   + L     + D    +RFE +    ELCNA  EL DP+
Sbjct: 397 DK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESFCLGKELCNAYSELNDPL 450

Query: 283 EQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +QR   E++M++K     +E +PIDE+FL  L   MP + G  +G DRLVM++T A +I 
Sbjct: 451 QQRKLLEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIR 510

Query: 341 EVIWTPFSQ 349
           +V++ P  +
Sbjct: 511 DVLFFPVMR 519


>gi|62185412|ref|YP_220197.1| lysyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312438|sp|Q5L545|SYK_CHLAB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|62148479|emb|CAH64249.1| putative lysyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 526

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 163/376 (43%), Gaps = 36/376 (9%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R              LKR+ I   +R Y     FIE+++  LQ
Sbjct: 161 LPDKHAGLSDKETRYRKRWLDLIASDEVRQTFLKRSRIIKLIRHYMDAQGFIEVETPILQ 220

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G       F T   + + +   ++L+ SPE S KK+L  G  +I+     +RN    
Sbjct: 221 NVYGGA-EATPFIT---MLNALHSEVFLRISPEISLKKILVGGTPRIYEIGKVFRNEGID 276

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-------KIFSFQNVNCNPFS 163
             H PEFT++E Y  +  Y  +M    N++       N               V+ +  +
Sbjct: 277 RTHNPEFTIIEAYATNIDYHSVMTYVENLVEHLVCELNDGSTVLTYTHLKQGPVSIDFKA 336

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +T+ ++   Y  +D+    D+  +          +++ +        + +F  ++ 
Sbjct: 337 PWIRMTMKDSIKTYGGVDVDLHGDHELRKILKECSSLPEESYMTAPRGSLIAALFDELVC 396

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPI 282
           +K      +     +  +P   + L     + D  F +RFE +    ELCNA  EL DP+
Sbjct: 397 DK------LIAPHHITDHPVETTPLCKSLRSGDADFVERFESFCLGKELCNAYSELNDPL 450

Query: 283 EQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
            QR   E++  +K     +E +PIDE+FL  L   +P + G  +G DRLVM++T A +I 
Sbjct: 451 RQRVLLEQQQAKKALDPDSEYHPIDEEFLEALCQGLPPTGGFGIGIDRLVMILTNAASIR 510

Query: 341 EVIWTPFSQ---SNQE 353
           +V++ P  +   S ++
Sbjct: 511 DVLYFPAMRRLESEKD 526


>gi|320094628|ref|ZP_08026390.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978437|gb|EFW10018.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 531

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 146/369 (39%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWWN--------RDFHYRRRP-----------FLLKRNMIQSSLREYFVENQF 41
           +  +P               D   RRR             +  R  +  S+RE F    +
Sbjct: 167 LRPLPKTWTTQDGKEITLSEDQRIRRRELDLITRPAARDMIRVRAAVNRSIRENFHRRGY 226

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           IE+++  LQ   G     R F+T +   + +   LYL+ + E   K+ +  G +++F   
Sbjct: 227 IELETPMLQVVHGGAA-ARPFTTHM---NALDMDLYLRIATEIYLKRAVVGGVDRVFEMN 282

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +RN      H PEFT LE Y A+  Y  +     ++I+ AA  A       + V    
Sbjct: 283 RNFRNEGMDSSHSPEFTSLEAYEAYSDYNGMADLTRDLIQQAARDAFDLPEGGEVVRLAD 342

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +E +     +    Y +       +   +  R  L   A++ G+ V        I   I
Sbjct: 343 GTEYDLSGQWDRIDLYGSTSEALGEEVTVETPRETLVKHAERIGLEVDDYAVSGKIVEDI 402

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E +     +   T +  +P   S L   + + P  T++++LY    E   A  EL DP
Sbjct: 403 FEELVASK--LWAPTFVYDFPEDTSPLTRYHRSRPGLTEKWDLYVRGFETGTAYSELADP 460

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           + QR RFE +         E   +DEDFL  +    P   G+ MG DRL+M++TG   I 
Sbjct: 461 VVQRERFEAQALAAANGDPEAMVMDEDFLVAMEQGFPPCGGMGMGIDRLLMVLTGQG-IR 519

Query: 341 EVIWTPFSQ 349
           E I  P  +
Sbjct: 520 ETIPFPLVK 528


>gi|167394823|ref|XP_001741114.1| lysyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165894451|gb|EDR22438.1| lysyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 768

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 84/431 (19%), Positives = 157/431 (36%), Gaps = 82/431 (19%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +PS  +   +++  +R+R              + R  +  ++R+Y  +  F+E+++ 
Sbjct: 138 LHMLPSMHYGLGDQETRFRKRYLDLIVNPETVKNFVLRTKVVKAVRKYLDDKGFLEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  T  R F T     + +   +Y++ +PE   K+L+  G  +++     +RN 
Sbjct: 198 ILNTIPGGAT-ARPFITH---HNQLDIQMYMRIAPELYLKELIVGGINRVYEIGRLFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ---------------KIF 152
                H PEFT  E+Y A+  Y  +MK    ++    +                      
Sbjct: 254 GIDQTHNPEFTTCEFYMAYADYNDIMKMTEELLGNIVKDITGGSTKLEIKDRLMDINNEE 313

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL--------------- 197
             + +             +   ++             D  +   +               
Sbjct: 314 DIKMLEKFFKEPIPRPFNSVECSKVIEKHCTELNYYYDGNNEKAMKKLFADFVTEKKMVL 373

Query: 198 ------------YLQAQQAGIRVAHDDTWSDIFSRILIEKI-------EPN--------- 229
                       +   ++ G ++       +  + +  + I       EP          
Sbjct: 374 DFTAPFKRISYVHALEEKFGEKIPRPLDGPEALAFLKKQAIKFNAICSEPQTTARVMDKL 433

Query: 230 ------LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
                   +   T +   P   S LA  + ++P  T+RFEL+    E+ NA  EL +PI 
Sbjct: 434 FGDLIENDLVQPTFVCDQPQLMSPLAKYHRSEPELTERFELFILKREIANAYTELNNPIV 493

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSGIAMGFDRLVMLVTGANNINEV 342
           QR  FE++ ++K    +E   +DE FL  +    P + G  +G DRL ML+   +NI EV
Sbjct: 494 QRSNFEQQAKDKAAGDDEAQLVDEVFLDAIEHAFPPTGGWGLGIDRLSMLLADVDNIKEV 553

Query: 343 IWTPFSQSNQE 353
           I  P  +   E
Sbjct: 554 ILFPTMRPEDE 564


>gi|325961761|ref|YP_004239667.1| lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323467848|gb|ADX71533.1| lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 521

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 85/364 (23%), Positives = 139/364 (38%), Gaps = 25/364 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R             +  R  I  S+RE    + ++E+++  
Sbjct: 168 LRPLPVLHADLNEETRVRQRYVDLMVRDEAREMVYTRAAITRSIRETLFRHNYVEVETPI 227

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L    G     R F T +   +   + + L+ + E   K+ +  G ++++     +RN  
Sbjct: 228 LNLVHGGA-LARPFETHM---NAFDQKMTLRIATELYLKRAVVGGIDRVYDMGRVFRNEG 283

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT LE Y A      + +    II  AA+                  E    
Sbjct: 284 VDSTHSPEFTTLECYEAWADQFVMAERIKEIILDAADAVGAGRVLQ-----TEAGEINLD 338

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              E  A Y  +      +        +L   A++  ++V        +   +  E +EP
Sbjct: 339 GEWEWLAVYPGLSDAVGQEVTPDTPLEVLREIAEKHEVKVDPKWDAEKLAVELFGEIVEP 398

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP     LA  +  D R  + ++L    +E   A  EL+DP+ QR R 
Sbjct: 399 T--LLNPTFVYDYPPSAQPLARPHREDGRLIEAWDLIIGGMERGTAFSELIDPVIQRERL 456

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++ +      +E   +DEDFL  L    P   GI +G DRLVML TGA  I E I  P 
Sbjct: 457 TEQSRHAAAGDDEAMQLDEDFLRALEYGAPPMGGIGLGIDRLVMLFTGAG-IRETILFPL 515

Query: 348 SQSN 351
            +  
Sbjct: 516 LKPE 519


>gi|15605514|ref|NP_220300.1| lysyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789523|ref|YP_328609.1| lysyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237803211|ref|YP_002888405.1| lysyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237805132|ref|YP_002889286.1| lysyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|6226185|sp|O84786|SYK_CHLTR RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|123606590|sp|Q3KKR1|SYK_CHLTA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|3329245|gb|AAC68376.1| Lysyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76168053|gb|AAX51061.1| lysyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273432|emb|CAX10347.1| lysyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274445|emb|CAX11240.1| lysyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 526

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 163/369 (44%), Gaps = 33/369 (8%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R              L R+ I   +REY  +  F+E+++  LQ
Sbjct: 161 LPDKHAGLADKEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQ 220

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G       F T L     +   ++L+ S E + KKLL  G  +++     +RN    
Sbjct: 221 TIYGGA-EATPFVTTLQ---ALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGID 276

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-------QKIFSFQNVNCNPFS 163
             H PEFTM+E Y A+  Y  +MK   N++       N                  +  +
Sbjct: 277 RTHNPEFTMIEAYAAYWDYNDVMKCVENLVEYIVRALNNGETQVQYSHLKSGPQVVDFKA 336

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +T+ E+ + Y  +D+    D+  +          ++  +  +  +  + +F  ++ 
Sbjct: 337 PWIRMTMKESISVYGGVDVDLHADHELRKILETQTSLPEKTYVHASRGELIALLFDELVC 396

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPI 282
           +K      +     +  +P   + L     + D    +RFE +    ELCNA  EL DP+
Sbjct: 397 DK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESFCLGKELCNAYSELNDPL 450

Query: 283 EQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +QR   E++M++K     +E +PIDE+FL  L   MP + G  +G DRLVM++T A +I 
Sbjct: 451 QQRKLLEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIR 510

Query: 341 EVIWTPFSQ 349
           +V++ P  +
Sbjct: 511 DVLFFPVMR 519


>gi|46202036|ref|ZP_00053901.2| COG2269: Truncated, possibly inactive, lysyl-tRNA synthetase (class
           II) [Magnetospirillum magnetotacticum MS-1]
          Length = 338

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 152/334 (45%), Positives = 212/334 (63%), Gaps = 2/334 (0%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPL 76
           RR  L  R+   ++ R +F    F E+++  LQ SPG E H++AF+T L        +PL
Sbjct: 5   RRANLDLRSRAVNATRAFFAARGFAEVETPCLQVSPGLEPHLKAFATALTDPYGGPDRPL 64

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           YL TSPEF+ KKLL AG  +++  A  +RN E+   H PEFTMLEWYRA  S + LM D 
Sbjct: 65  YLHTSPEFAMKKLLVAGMPRLYQLAKVFRNAERSATHHPEFTMLEWYRAGASLDDLMDDT 124

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             +++  A  A  K+   ++ +C+PF     ++VAEAF  YA++D+  T  +P  PDR  
Sbjct: 125 EALVQECARAAGTKLLRREDKDCDPFVPWRRLSVAEAFGEYAHMDVLATAPDPTSPDRSA 184

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
           L  +A + GI V+  DTW DIF ++++++IEP+LG +   IL  YP   +AL+   PADP
Sbjct: 185 LAAEATRIGISVSPSDTWEDIFFKVMLDRIEPHLGFDRPVILHSYPVSMAALSRPSPADP 244

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
           R  +RFE YA  +ELCNA  EL D  EQR RF  +M  K+++Y E YP+DEDFLA L   
Sbjct: 245 RVAERFEAYALGVELCNAFGELTDAAEQRRRFTADMDLKERLYGERYPLDEDFLAALDLG 304

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           MP S+GIA+GFDRLVML+ GA +I+E++W P +Q
Sbjct: 305 MPDSAGIALGFDRLVMLLAGAQSIDEILWAPVAQ 338


>gi|322823684|gb|EFZ29386.1| lysyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 674

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 93/359 (25%), Positives = 159/359 (44%), Gaps = 26/359 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + D  YR R             + KR+++  +LR+YF E  F+E+++  L        + 
Sbjct: 226 DNDVKYRYRFTDMMTNPCVIETIKKRHVMLQALRDYFNERNFVEVETPVLHTVASGA-NA 284

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           ++F T     +     L+L+ +PE   K+ +  G E+I+     +RN +    H PEFT 
Sbjct: 285 KSFVTH---HNANAMDLFLRVAPELHLKQCIVGGMERIYEIGKVFRNEDADRSHNPEFTS 341

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--------PEYITVA 171
            E+Y A+ +YE LM    +I R  A   N              +            ++V 
Sbjct: 342 CEFYAAYHTYEDLMPMTEDIFRQLAMRVNGTTLVQIYPENAHGNPVTVDLGKPFRRVSVY 401

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +   R + ++     +         + +   +  I +    T   +F +++   I     
Sbjct: 402 DEVQRVSGVEFPPPTELNTPKGIAYMSVVMLRYNIPLPPVRTAPKMFEKLIDFFI--TDR 459

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           I   T +  +P   S LA    + P   +RFEL+   IE CNA  EL DP EQ HRF+++
Sbjct: 460 IVEPTFVMDHPLFMSPLAKEQVSRPGLAERFELFVNGIEYCNAYSELNDPHEQYHRFQQQ 519

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           + +++    E  P+DE FL  L   +P ++G  MG DR +ML+T ++NI + I  P  +
Sbjct: 520 LVDRQVGDEEAMPLDETFLKSLQVGLPPTAGWGMGIDRALMLLTNSSNIRDGIIFPLLR 578


>gi|297571583|ref|YP_003697357.1| lysyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931930|gb|ADH92738.1| lysyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 1062

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 85/366 (23%), Positives = 142/366 (38%), Gaps = 30/366 (8%)

Query: 1    MHQIPSQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +  +P  P  N     + R                R  + + +R+      ++E ++  L
Sbjct: 713  LVPMPKIPLTNPHLRAKLRHIDYAMNPQAYNLFRARAQVVAYVRQTLYAQGYLEAETPIL 772

Query: 50   QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
            Q   G   + R F T +       + L L+ +PE   K+L+  G  K+F     +RN   
Sbjct: 773  QTIHGGA-NARPFRTHIR---AYDQALTLRIAPELYLKRLVVGGTPKVFEIGRNFRNEGV 828

Query: 110  GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI--FSFQNVNCNPFSEPEY 167
               H PEFT LE Y A+  ++ +      + R AA   + K    +      +       
Sbjct: 829  DATHNPEFTSLEAYEAYGDWDTMRVLTEELFRGAATAIHGKPEIVAEDGTVLDLSQPWPV 888

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            ++V +A +      +       +  D    Y    +         T   + + +  E IE
Sbjct: 889  VSVFDAVSEAVGRTIVPGSTIAEYADLCERYEIEAE---------TVGQLVTELYDELIE 939

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
             +      T    +P   S L    P +P   +R++L    +EL  A  EL  P+EQR R
Sbjct: 940  SSTVF--PTFYTGFPVETSPLTMADPDNPHIAQRWDLVGLGMELGTAYTELAHPLEQRAR 997

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F ++         E   IDE FL  L   MP + G+ +G DR+VM +TG   I +V+  P
Sbjct: 998  FTQQSLLAAGGDPEAMEIDEPFLTALEFGMPPTGGLGIGMDRMVMFLTGT-TIRDVLAFP 1056

Query: 347  FSQSNQ 352
            F +  +
Sbjct: 1057 FVKPEK 1062


>gi|119616029|gb|EAW95623.1| lysyl-tRNA synthetase, isoform CRA_e [Homo sapiens]
          Length = 583

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 80/363 (22%), Positives = 143/363 (39%), Gaps = 44/363 (12%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           +H +P   +  +D                              I++  +   PG     +
Sbjct: 238 LHMLPHLHFGLKDK-----------------------------IETPMMNIIPGGAV-AK 267

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
            F T     + +   LY++ +PE   K L+  G ++++     +RN      H PEFT  
Sbjct: 268 PFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTC 324

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYITVAE 172
           E+Y A+  Y  LM+    ++    +          +         + +       I + E
Sbjct: 325 EFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVE 384

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              +   + L  T     +  R +L        +      T + +  +++ E +E     
Sbjct: 385 ELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTC-- 442

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
              T +  +P   S LA  + +    T+RFEL+    E+CNA  EL DP+ QR  FE++ 
Sbjct: 443 INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQA 502

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NNI EV+  P  +  
Sbjct: 503 KAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPE 562

Query: 352 QEE 354
            ++
Sbjct: 563 DKK 565


>gi|262203856|ref|YP_003275064.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262087203|gb|ACY23171.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 507

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 79/366 (21%), Positives = 142/366 (38%), Gaps = 23/366 (6%)

Query: 1   MHQIPSQPW-WNRDFHYRRRPFL-----------LKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R                R  + + LR       F+E+++  
Sbjct: 147 LRPLPVAHKDMNEETRVRQRYVDLIMRPEARSIARTRISVIAELRAALGRRGFLEVETPM 206

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     +     L+L+ +PE   K+ +  G E++F     +RN  
Sbjct: 207 LQTLHGGAA-ARPFVTHS---NAFDMDLFLRIAPELFLKRCVVGGIERVFEINRNFRNEG 262

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--NCNPFSEPE 166
               H PEF MLE Y+A+ +Y+        +++  ++ A   +          +   E  
Sbjct: 263 ADSTHSPEFAMLETYQAYGTYDDAATMTRELVQEVSQAALGTLTPEMPDGTTYDLSGEWT 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ-QAGIRVAHDDTWSDIFSRILIEK 225
            + +  + +     ++    +        LL + A+    I          +   +    
Sbjct: 323 SLQMYPSLSEALGREIVPMSEGGGTSVDELLAIAAEVGLEIPKDKGYGHGKLVEELWEHM 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +     +     +  +P   S L   + + P   ++++LY    EL     EL+DPI QR
Sbjct: 383 VGEK--LTQPVFIRDFPVETSPLVRAHRSVPGVVEKWDLYVRGFELATGYSELVDPIIQR 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RF  + +      +E   +DE+FLA +   MP ++G  MG DRL+M +TG   I E I 
Sbjct: 441 ERFVDQARLAAAGDDEAMALDEEFLAAMEYGMPPTAGTGMGIDRLLMALTGLG-IRETIL 499

Query: 345 TPFSQS 350
            P  + 
Sbjct: 500 FPLVKP 505


>gi|307107552|gb|EFN55794.1| hypothetical protein CHLNCDRAFT_57712 [Chlorella variabilis]
          Length = 618

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 90/393 (22%), Positives = 154/393 (39%), Gaps = 50/393 (12%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+   S++R    E  F+E+++ 
Sbjct: 232 LLPLPDKWHGLSDVEQRYRKRYLDMIVTPGVVDTFKARSKTISTMRRMLEEQDFLEVETP 291

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L+ S G     R F T     + + +   ++ + E   K+L+  G E++F     +RN 
Sbjct: 292 VLESSAGGA-DARPFVT---YHNALGRNFTMRIATELHLKRLVVGGLERVFEIGRIFRNE 347

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEPE 166
                H PEFT +E Y+A+  Y  +M     IIR  A+    Q    +Q    +  +   
Sbjct: 348 GISARHNPEFTSIELYQAYADYSDMMDLTEAIIRTCAQAVCGQLQLPYQGQVLDFGAPFC 407

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG-----IRVAHDDTWSDIFSRI 221
             T+ +       +D      + +      L    Q +        V    +   + + +
Sbjct: 408 RATMHDLVRDKTGVDFEAFGGDLEAARAAALEALRQHSDTYAVQQAVLKAPSVGHVLNEV 467

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
               +E    +   T +  +P   S LA  + +     +RFEL+    EL N+  EL DP
Sbjct: 468 FEGLVEA--DLQQPTFVLDHPVEISPLAKPHRSRKGVVERFELFVVGRELANSFSELTDP 525

Query: 282 IEQRHRFEKEMQEKKKIYNETYP------------------------IDEDFLACLT-EM 316
           ++QR R E ++   +    +                           +DEDFLA L   M
Sbjct: 526 VDQRQRLEAQVAAHQAAVQQQQAAAAVANGAGAAEAASGEEEAYEVVLDEDFLAALEYGM 585

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           P + G+ MG DRLVML+T + +I +VI  P  +
Sbjct: 586 PPTGGMGMGIDRLVMLLTDSPSIRDVIAFPLMK 618


>gi|323475362|gb|ADX85968.1| lysyl-tRNA synthetase [Sulfolobus islandicus REY15A]
          Length = 492

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 82/331 (24%), Positives = 149/331 (45%), Gaps = 14/331 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R  +  R MI   +RE+     FIE+++  +Q   G     + F T +   +++ +  YL
Sbjct: 164 RKAMEIRYMIIREIREFLYSKGFIEVETPIVQPVYGGA-LAKPFKTHV---NYLNEDWYL 219

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + + E   K+ +  G  K+F     +RN +    H PEFT+LE Y A+  Y  +M    +
Sbjct: 220 RIALELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNPEFTLLELYWAYADYNDIMNLTED 279

Query: 139 IIR-CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++     V N    ++     +  +  + I++ ++ +           +  +  D  L 
Sbjct: 280 LLKSVIKRVTNSTKVAYGKYEIDFEAPFKRISMYDSLSEILG------KNVENMSDDELK 333

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
            L  +   I   +      +  ++  + + P   +   T +  YP   + L   +   P 
Sbjct: 334 ELMKKYNLIPRGNQYVRGLMIEKLFDKLVTPT--LTNPTFITDYPIETTPLCKPHRNKPG 391

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
             +RFE++   +E+ NA  EL DPI Q   F +E +  ++   E +P D+DF+  L   M
Sbjct: 392 LVERFEMFIAGMEIANAYTELNDPILQDKLFREEQEMFRRGDEEAHPYDKDFVRALSYGM 451

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           P + G+ +G DR+VMLVT   +I EVI  P 
Sbjct: 452 PPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|120406308|ref|YP_956137.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119959126|gb|ABM16131.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 509

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 82/364 (22%), Positives = 145/364 (39%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P       +                 R    +R  +  ++R       F+E+++  
Sbjct: 153 LRPLPVAHKEMSEESRVRQRYVDLIVRPEARAIARQRVAVVRAVRNALERRGFLEVETPM 212

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 213 LQTLAGGAA-ARPFVTHS---NALDADLYLRIAPELFLKRCVVGGFDRVFELNRNFRNEG 268

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+ +Y+        +I+        +    + V     S  +  
Sbjct: 269 ADSTHSPEFAMLETYQAYGTYDDSALVTRQLIQE----VADEAIGTRQVPLADGSVYDLD 324

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKI 226
              +    Y ++      +   Q     L+  A   G+ +  D       +   +    +
Sbjct: 325 GEWDDIQMYPSLSEALGEEITPQTAVPRLWRIADGLGVEIPRDRGYGHGKLVEELWEFTV 384

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +P   + L   + +    T++++LY  N EL     EL+DPI QR 
Sbjct: 385 GDK--LWAPTFVRDFPVETTPLTRPHRSIEGVTEKWDLYIRNFELATGYSELVDPIIQRE 442

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE++ +      +E   +DEDFLA L   MP ++G  MG DRL+M +TG  +I E +  
Sbjct: 443 RFEEQARAAAAGDDEAMALDEDFLAALEYGMPPTTGTGMGIDRLLMALTGL-SIRETVLF 501

Query: 346 PFSQ 349
           P  +
Sbjct: 502 PIVR 505


>gi|297748909|gb|ADI51455.1| Lysyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749789|gb|ADI52467.1| Lysyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 527

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 163/369 (44%), Gaps = 33/369 (8%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R              L R+ I   +REY  +  F+E+++  LQ
Sbjct: 162 LPDKHAGLADKEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQ 221

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G       F T L     +   ++L+ S E + KKLL  G  +++     +RN    
Sbjct: 222 TIYGGA-EATPFVTTLQ---ALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGID 277

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-------QKIFSFQNVNCNPFS 163
             H PEFTM+E Y A+  Y  +MK   N++       N                  +  +
Sbjct: 278 RTHNPEFTMIEAYAAYWDYNDVMKCVENLVEYIVRALNNGETQVQYSHLKSGPQVVDFKA 337

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +T+ E+ + Y  +D+    D+  +          ++  +  +  +  + +F  ++ 
Sbjct: 338 PWIRMTMKESISVYGGVDVDLHADHELRKILETQTSLPEKTYVHASRGELIALLFDELVC 397

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPI 282
           +K      +     +  +P   + L     + D    +RFE +    ELCNA  EL DP+
Sbjct: 398 DK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESFCLGKELCNAYSELNDPL 451

Query: 283 EQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +QR   E++M++K     +E +PIDE+FL  L   MP + G  +G DRLVM++T A +I 
Sbjct: 452 QQRKLLEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIR 511

Query: 341 EVIWTPFSQ 349
           +V++ P  +
Sbjct: 512 DVLFFPVMR 520


>gi|296436331|gb|ADH18505.1| lysyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296438190|gb|ADH20351.1| lysyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140691|gb|ADH97449.1| lysyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 526

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 163/369 (44%), Gaps = 33/369 (8%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R              L R+ I   +REY  +  F+E+++  LQ
Sbjct: 161 LPDKHAGLADKEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQ 220

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G       F T L     +   ++L+ S E + KKLL  G  +++     +RN    
Sbjct: 221 TIYGGA-EATPFVTTLQ---ALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGID 276

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-------QKIFSFQNVNCNPFS 163
             H PEFTM+E Y A+  Y  +MK   N++       N                  +  +
Sbjct: 277 RTHNPEFTMIEAYAAYWDYNDVMKCVENLVEYIVRALNNGETQVQYSHLKSGPRVVDFKA 336

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +T+ E+ + Y  +D+    D+  +          ++  +  +  +  + +F  ++ 
Sbjct: 337 PWIRMTMKESISVYGGVDVDLHADHELRKILETQTSLPEKTYVHASRGELIALLFDELVC 396

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPI 282
           +K      +     +  +P   + L     + D    +RFE +    ELCNA  EL DP+
Sbjct: 397 DK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESFCLGKELCNAYSELNDPL 450

Query: 283 EQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +QR   E++M++K     +E +PIDE+FL  L   MP + G  +G DRLVM++T A +I 
Sbjct: 451 QQRKLLEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIR 510

Query: 341 EVIWTPFSQ 349
           +V++ P  +
Sbjct: 511 DVLFFPVMR 519


>gi|300780445|ref|ZP_07090301.1| lysyl-tRNA synthetase [Corynebacterium genitalium ATCC 33030]
 gi|300534555|gb|EFK55614.1| lysyl-tRNA synthetase [Corynebacterium genitalium ATCC 33030]
          Length = 508

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 84/368 (22%), Positives = 147/368 (39%), Gaps = 24/368 (6%)

Query: 1   MHQIPSQP------------WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P               + +       R   L R  + ++LR+Y     F+E+++  
Sbjct: 147 LRPLPVAFADMNEEQRVRYRYTDLIMRDDARKNALTRIKVIAALRKYLTGLDFVEVETPM 206

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 207 LQTLHGGAA-ARPFETHS---NALDIDLYLRIAPELYLKRCVVGGIDRVFEINRNFRNEG 262

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEFTM+E Y+A  +Y+   +     ++  A+              + +   + +
Sbjct: 263 VDSSHSPEFTMMETYQAWGTYKDGAETIKGAVQFCAQEVFGSTTVTLADGTSYDLGGDWK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIE 224
            + +  +             +         L   A   G++V  +  W    +   I  E
Sbjct: 323 VLEMYPSLNEALARKFPGQPEVTIDSTVDELKGIAAAIGLKVPENAGWGHGKLVEEIWEE 382

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
                  +   T +  +P   S L   +   PR T++++LY    EL     EL+DP+ Q
Sbjct: 383 LCSDQ--LYEPTFVINFPVETSPLTRDHREKPRVTEKWDLYVRGFELATGYSELVDPVIQ 440

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R RFE + +      +E   +DEDFLA +   MP ++G  MG DRL+M +TG   I E +
Sbjct: 441 RERFEDQARLAADGDDEAMVLDEDFLAAMEQGMPPTAGTGMGIDRLLMALTGLG-IRETV 499

Query: 344 WTPFSQSN 351
             P  +  
Sbjct: 500 LFPMVRPE 507


>gi|256833305|ref|YP_003162032.1| lysyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686836|gb|ACV09729.1| lysyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 515

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 148/373 (39%), Gaps = 31/373 (8%)

Query: 1   MHQIPSQPWW--------NRDFHYRRRPFLLKR-----------NMIQSSLREYFVENQF 41
           +  +P+            + +   R+R   L             + +  SLR+ F    F
Sbjct: 153 LRPLPNLYAREDGTTAELSEEARVRQRYVDLIARPAARDAARLRSQVVRSLRDNFHARDF 212

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           +EI++  LQ   G     R F T +   +     LYL+ +PE   K+ +  G E++F   
Sbjct: 213 MEIETPMLQTIHGGAA-ARPFVTHM---NAFDMDLYLRIAPELFLKRAVVGGLERVFEIN 268

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +RN      H PEF MLE Y A+  Y  +     ++++ AA  A         V    
Sbjct: 269 RNFRNEGVDSSHSPEFAMLEAYEAYGDYNTMAVLTQDLVQTAARDAFD---GETLVTLAD 325

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSR 220
            SE E        + Y ++     ++   Q     L   AQ   I +         +   
Sbjct: 326 GSEYELGGEWAQLSMYHSLSEAAGVEITPQTSVAELMTLAQSVEISLDPKKVSHGKLVEE 385

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +    +     +   T +  +P   S L   + + P   ++++LY    EL  A  EL+D
Sbjct: 386 LWEHFV--GHDLWAPTFVRDFPVETSPLTRDHRSIPGVVEKWDLYVRGFELATAYSELVD 443

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P+ QR RFE +        +E   +DEDFL  +   MP S G+ MG DRL+M +TG   I
Sbjct: 444 PVIQRQRFEAQAVLAAAGDDEAMVLDEDFLTAMEYAMPPSGGMGMGLDRLLMALTGLG-I 502

Query: 340 NEVIWTPFSQSNQ 352
            E I  P  +  Q
Sbjct: 503 RETILFPLVKPAQ 515


>gi|222106967|ref|YP_002547758.1| lysyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221738146|gb|ACM39042.1| lysyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 357

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 192/347 (55%), Positives = 246/347 (70%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFST 64
            + PWW    H  RRPFLL RN IQ++LR YF  N F+E+D+ +LQ SPGNE H+ AF+T
Sbjct: 10  SASPWWTPRVHADRRPFLLGRNAIQAALRLYFSRNDFLEVDAATLQVSPGNEAHLHAFAT 69

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
             I  D    PLYL TSPEF+CKKLLAAGE +I CFAH +RN E+G LH PEFTMLEWYR
Sbjct: 70  SAIGNDGQSHPLYLHTSPEFACKKLLAAGESRIACFAHVYRNRERGPLHHPEFTMLEWYR 129

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A E+YE+LM DC  I+  AAE    + F+F+   C+PF+  E ++VA+AF R+A IDL  
Sbjct: 130 AGETYERLMADCAAILALAAETTGTRQFTFRGGVCDPFAPFERLSVADAFERHAGIDLLG 189

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
           ++    + DR  L  Q +Q G+RVA DD W+D+FSR+++EK+EP+LG +  TILDRYP  
Sbjct: 190 SVFAGGETDRDHLAAQLRQVGMRVAGDDGWADLFSRVIVEKVEPHLGFDRPTILDRYPVA 249

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           E+ALA     D R  +RFELYAC +EL NA  EL DP EQR RF  EM EK+++Y ETYP
Sbjct: 250 EAALARPATDDSRVAERFELYACGVELANAFGELTDPQEQRRRFMLEMAEKQRVYGETYP 309

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           +DEDFL  L  MP++SGIA+GFDRLV+L TGA  I++V+WTP ++  
Sbjct: 310 LDEDFLEALAIMPEASGIALGFDRLVLLATGAQRIDQVLWTPVAEPQ 356


>gi|46446862|ref|YP_008227.1| lysyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25]
 gi|46400503|emb|CAF23952.1| probable lysyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 529

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 90/375 (24%), Positives = 165/375 (44%), Gaps = 35/375 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +  +     +++  YR+R                R+ I   +R YF + QF+E+++ 
Sbjct: 164 LLPLADKHGGLADKELRYRKRWLDLISHLDVAKVFRIRSHILKEIRSYFDQYQFLEVETP 223

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T+L   + + + ++L+ S E   KKL+  G  K++  A  +RN 
Sbjct: 224 ILQSIYGGA-EARPFITKL---NALDQEMFLRISLEIPLKKLIVGGMHKVYEMARVFRNE 279

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN-------CN 160
                H PEFT+LE Y ++  Y  +M    N+    A             +        +
Sbjct: 280 GIDRNHNPEFTLLEAYASYWDYFDMMNFVENLFEKLALDLYGTTKVPYTAHEGAETIYID 339

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +    +T+ E+  +YAN+D        D+  RHLL   A     +     +   + + 
Sbjct: 340 MKAPWIRLTMKESIKKYANLDPNVLS---DEEMRHLLLESAH-CDPKKIKGLSRGLLIAA 395

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYP----ADPRFTKRFELYACNIELCNACD 276
           +    +EP+  +     +  +P   + L   +      +    +RFE +    E+CN+  
Sbjct: 396 LFEVFVEPH--LIQPHHIYDHPIETTPLCKPHRDLKYREEGLVERFESFILTQEVCNSYS 453

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC-LTEMPQSSGIAMGFDRLVMLVTG 335
           EL DP  QRH  E +   ++    E  P+DE+F+      MP + GI +G DRLVM++T 
Sbjct: 454 ELNDPEIQRHLLELQSDRREAGDEEASPLDEEFIEAICQGMPPTGGIGIGIDRLVMILTN 513

Query: 336 ANNINEVIWTPFSQS 350
           +++I +V++ P+ ++
Sbjct: 514 SHSIRDVLYFPWMKT 528


>gi|284034303|ref|YP_003384234.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283813596|gb|ADB35435.1| lysyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 506

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 81/365 (22%), Positives = 150/365 (41%), Gaps = 27/365 (7%)

Query: 1   MHQIPSQP------------WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P++             + +       R  +  +  +  SLR  F  + F+E+++ +
Sbjct: 155 LRPLPNEHNPLSEEARVRMRYVDLIVRPEARDMVRTKAAVLKSLRATFDAHTFVEVETPT 214

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ + G     R F T L   +   + + L+ + E   K+ +  G ++++     +RN  
Sbjct: 215 LQLTNGGAA-ARPFRTHL---NAFDQEMLLRIALELDLKRAMIGGVDRVYEIGRTFRNEG 270

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN-VNCNPFSEPEY 167
               H  EF+M+E Y+A+  Y+ +      +IR AA    + + + ++    +      +
Sbjct: 271 LDSTHAAEFSMIEAYQAYGDYDSMAVLIEELIRNAARAVGRTVITARDGSTIDLDQPWRH 330

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            T+ E  +     ++  +       +   L   A++  + +       +I   I  + +E
Sbjct: 331 ATLFELVSEVVGEEVDAS------TEAAALIKIAERHEVELQPGWNAGEIALEIYEKLVE 384

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  YP     LA  +   P   + ++L    +EL  A  EL DP+ QR R
Sbjct: 385 HT--LIQPTYVRDYPESVRPLAKPHRERPGLVEAWDLIINGVELGVAYSELNDPVIQRER 442

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              +         E   +DEDFL  +   MP + G+ MG DRLVML TGA  I E I  P
Sbjct: 443 LVAQSLLAAAGDPEAMELDEDFLRAMEFGMPPAGGMGMGLDRLVMLFTGAG-IRETILFP 501

Query: 347 FSQSN 351
             +  
Sbjct: 502 LLRPE 506


>gi|229581408|ref|YP_002839807.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012124|gb|ACP47885.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 492

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 82/331 (24%), Positives = 149/331 (45%), Gaps = 14/331 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R  +  R MI   +RE+     FIE+++  +Q   G     + F T +   +++ +  YL
Sbjct: 164 RKAMEIRYMIIREIREFLYSKGFIEVETPIVQPVYGGA-LAKPFKTHV---NYLNEDWYL 219

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + + E   K+ +  G  K+F     +RN +    H PEFT+LE Y A+  Y  +M    +
Sbjct: 220 RIALELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNPEFTLLELYWAYADYNDIMNLTED 279

Query: 139 IIR-CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++     V N    ++     +  +  + I++ ++ +           +  +  D  L 
Sbjct: 280 LLKSVIKRVTNSTKVAYGKYEIDFEAPFKRISMYDSLSEILG------KNVENMSDDELK 333

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
            L  +   I   +      +  ++  + + P   +   T +  YP   + L   +   P 
Sbjct: 334 ELMKKYNLIPRGNQYVRGLMIEKLFDKLVTPT--LTNPTFITDYPIETTPLCKPHRNKPG 391

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
             +RFE++   +E+ NA  EL DPI Q   F +E +  ++   E +P D+DF+  L   M
Sbjct: 392 LVERFEMFIAGMEIANAYTELNDPILQDKLFREEQEMFRRGDEEAHPYDKDFVRALSYGM 451

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           P + G+ +G DR+VMLVT   +I EVI  P 
Sbjct: 452 PPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|227828292|ref|YP_002830072.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227831050|ref|YP_002832830.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229585522|ref|YP_002844024.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238620484|ref|YP_002915310.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284998545|ref|YP_003420313.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|227457498|gb|ACP36185.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227460088|gb|ACP38774.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228020572|gb|ACP55979.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238381554|gb|ACR42642.1| lysyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284446441|gb|ADB87943.1| lysyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|323478087|gb|ADX83325.1| lysyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 492

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 82/331 (24%), Positives = 149/331 (45%), Gaps = 14/331 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R  +  R MI   +RE+     FIE+++  +Q   G     + F T +   +++ +  YL
Sbjct: 164 RKAMEIRYMIIREIREFLYSKGFIEVETPIVQPVYGGA-LAKPFKTHV---NYLNEDWYL 219

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + + E   K+ +  G  K+F     +RN +    H PEFT+LE Y A+  Y  +M    +
Sbjct: 220 RIALELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNPEFTLLELYWAYADYNDIMNLTED 279

Query: 139 IIR-CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++     V N    ++     +  +  + I++ ++ +           +  +  D  L 
Sbjct: 280 LLKSVIKRVTNSTKVAYGKYEIDFEAPFKRISMYDSLSEILG------KNVENMSDDELK 333

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
            L  +   I   +      +  ++  + + P   +   T +  YP   + L   +   P 
Sbjct: 334 ELMKKYNLIPRGNQYVRGLMIEKLFDKLVTPT--LTNPTFITDYPIETTPLCKPHRNKPG 391

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
             +RFE++   +E+ NA  EL DPI Q   F +E +  ++   E +P D+DF+  L   M
Sbjct: 392 LVERFEMFIAGMEIANAYTELNDPILQDKLFREEQEMFRRGDEEAHPYDKDFVRALSYGM 451

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           P + G+ +G DR+VMLVT   +I EVI  P 
Sbjct: 452 PPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|254166510|ref|ZP_04873364.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596296|ref|YP_003482992.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624120|gb|EDY36681.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534083|gb|ADD08430.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 480

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 157/366 (42%), Gaps = 30/366 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P + +   + +  YR+R              +KR++I+  +R +     F+E+++ 
Sbjct: 131 LYDLPHEWFGIEDTEKRYRQRYLDLMFNKDAFDTFIKRSIIEKEIRMFLWNRGFLEMETP 190

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + + F T +   + I +  YL+ S E   K+L+  G  K+F  A  +RN 
Sbjct: 191 VLQPVYGGA-NAKPFKTHV---NAIDRDYYLRISDELYLKRLIVGGYNKVFEIAKDFRNE 246

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +    H PEFTM+E Y+++  Y  +M     +I+  A+    +   F     +       
Sbjct: 247 DIDTTHNPEFTMIEIYQSYVDYNDMMNLTEEMIKHVAQKLEIEKVKFGEYEIDFTKPFRR 306

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
             + +  A+   ID        +      +     +  I++           ++     E
Sbjct: 307 EKMLDMLAKR-GID--------ENTSDEEIKAMLDEYKIKM-PQYNRGLALGKLFERVCE 356

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +     +  +P   + L  ++  D R  +RFELY  ++EL N   EL DP+ Q   
Sbjct: 357 E--DLIQPVFVIDHPRETTPLCKLHRKDNRLIERFELYVGSVELANGYTELNDPLLQEKF 414

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F +E++ +     E +  DEDF+  L   MP   G+ +G DRL ML+TG  +I EVI  P
Sbjct: 415 FREEVERRTLGDEEAHQYDEDFIEALRWGMPPMGGVGIGIDRLTMLLTGNTSIKEVILFP 474

Query: 347 FSQSNQ 352
                +
Sbjct: 475 ILAPKK 480


>gi|166154123|ref|YP_001654241.1| lysyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166154998|ref|YP_001653253.1| lysyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335361|ref|ZP_07223605.1| lysyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|226710884|sp|B0B907|SYK_CHLT2 RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|226710885|sp|B0BAN6|SYK_CHLTB RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|165930111|emb|CAP03594.1| lysyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165930986|emb|CAP06548.1| lysyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 526

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 163/369 (44%), Gaps = 33/369 (8%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R              L R+ I   +REY  +  F+E+++  LQ
Sbjct: 161 LPDKHAGLADKEIRYRKRWADLISSEDVRKTFLTRSRILKLIREYMDQQSFLEVETPILQ 220

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G       F T L     +   ++L+ S E + KKLL  G  +++     +RN    
Sbjct: 221 TVYGGA-EATPFVTTLQ---ALHAEMFLRISLEIALKKLLVGGMSRVYEIGKVFRNEGID 276

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-------QKIFSFQNVNCNPFS 163
             H PEFTM+E Y A+  Y  +MK   N++       N                  +  +
Sbjct: 277 RTHNPEFTMIEAYAAYWDYNDVMKCVENLVEYIVRALNNGETQVQYSHLKSGPQVVDFKA 336

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +T+ E+ + Y  +D+    D+  +          ++  +  +  +  + +F  ++ 
Sbjct: 337 PWIRMTMKESISVYGGVDVDLHADHELRKILETQTSLPEKTYVHASRGELIALLFDELVC 396

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPI 282
           +K      +     +  +P   + L     + D    +RFE +    ELCNA  EL DP+
Sbjct: 397 DK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESFCLGKELCNAYSELNDPL 450

Query: 283 EQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +QR   E++M++K     +E +PIDE+FL  L   MP + G  +G DRLVM++T A +I 
Sbjct: 451 QQRKLLEEQMRKKALNPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMMLTDAASIR 510

Query: 341 EVIWTPFSQ 349
           +V++ P  +
Sbjct: 511 DVLFFPVMR 519


>gi|157872107|ref|XP_001684602.1| lysyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68127672|emb|CAJ05785.1| putative lysyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 536

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 87/336 (25%), Positives = 151/336 (44%), Gaps = 14/336 (4%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
             KR+ I  +LR++     F+E+++  L        + + F T     +     L+L+ +
Sbjct: 112 FRKRHAITRALRDFLDARSFVEVETPVLHSVASGA-NAKPFVTH---HNANDADLFLRVA 167

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   K+ +  G E+++     +RN +    H PEFT  E+Y A+ +YE LM     I+R
Sbjct: 168 PELHLKQCVVGGMERVYEIGRVFRNEDADRSHNPEFTTCEFYAAYHTYEDLMTMTEEILR 227

Query: 142 CAAEVANQK-------IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
             A  AN           + + V  +       +   +A    A ++L    +       
Sbjct: 228 HLALAANGTTKITVTSCVAKKPVEIDLAQPFRRVNAYDAVQEAAGVELPPPTELSTPRGL 287

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
             +     +  I +    T + +F +++   I     +   T +  +P   S LA    A
Sbjct: 288 AYMSAIMLRYNIPLPSVRTAAKMFDKLIDYFI--TDCVVEPTFVTDHPLFMSPLAMEQRA 345

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
            P  + RFEL+    E CNA  EL DP EQ +RF++++ +++   +E   +DE FL  L 
Sbjct: 346 RPGLSARFELFINGTEYCNAYSELNDPQEQYYRFQQQLLDRQTGDDEAMALDETFLKALQ 405

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P ++G  MG DR+VML+ G++ I E I  P  +
Sbjct: 406 VGLPPTAGWGMGIDRVVMLLNGSSTIREDILFPLLR 441


>gi|163841924|ref|YP_001626329.1| lysyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162955400|gb|ABY24915.1| lysyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 501

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 84/366 (22%), Positives = 144/366 (39%), Gaps = 26/366 (7%)

Query: 1   MHQIPSQPW-WNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   R+R             +  R  I  S+RE      ++E++   
Sbjct: 147 LRPLPVLHADLNEENRVRQRYVDLMVRDEARQMVRTRAAITRSVRETLNSLDYVEVEGPV 206

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  +  R F T +   +   + + L+ + E   K+ +  G ++++     +RN  
Sbjct: 207 LQLIHGGAS-ARPFETHI---NAFDQKMTLRIALELYLKRAVVGGIDRVYEMGRIFRNEG 262

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTMLE Y A+     + +    II  AA++   +         +   E +++
Sbjct: 263 VDSTHSPEFTMLECYEAYADQFVMAERMRQIILNAADLIGSRQIETPAGVIDLDGEWQWL 322

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            V      Y  +          +     L   A +  I++        +   +  E +EP
Sbjct: 323 GV------YPGLSEVVGQKITPETKAETLQALAVEHEIKIDPAWDAEKLVVELFCELVEP 376

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP     LA  + ++P   + ++L    +E   A  EL+DP+ QR R 
Sbjct: 377 K--LLQPTFVYDYPPSAQPLARPHRSEPGLIEAWDLIIGGMERGTAFSELIDPVIQRERL 434

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++         E   +DEDFL  L    P   GI +G DRLVML TG   I E I  P 
Sbjct: 435 TEQSLRAASGDPEAMQLDEDFLRALEYGAPPMGGIGLGIDRLVMLFTGVG-IRESILFPL 493

Query: 348 SQSNQE 353
            + + +
Sbjct: 494 LKPDTQ 499


>gi|254167277|ref|ZP_04874129.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623540|gb|EDY36103.1| lysyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 480

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 156/366 (42%), Gaps = 30/366 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++ +P + +   + +  YR+R              +KR++I+  +R +     F+E+++ 
Sbjct: 131 LYDLPHEWFGIEDTEKRYRQRYLDLMFNKDAFDTFIKRSIIEKEIRMFLWNRGFLEMETP 190

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + + F T +   + I +  YL+ S E   K+L+  G  K+F  A  +RN 
Sbjct: 191 VLQPVYGGA-NAKPFKTHV---NAIDRDYYLRISDELYLKRLIVGGYNKVFEIAKDFRNE 246

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +    H PEFTM+E Y+++  Y  +M     +I+  A+    +   F     +       
Sbjct: 247 DIDTTHNPEFTMIEIYQSYVDYNDMMDLTEEMIKHVAQKLEIEKVKFGEYEIDFTKPFRR 306

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
             + +  A+   ID        +      +     +  I++           ++     E
Sbjct: 307 EKMLDMLAKR-GID--------ENTSDEEIKRMLDEFKIKM-PQYNRGLALGKLFERVCE 356

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +     +  +P   + L  ++  D R  +RFELY   +EL N   EL DP+ Q   
Sbjct: 357 E--DLIQPVFVIDHPRETTPLCKLHRKDNRLIERFELYVGGVELANGYTELNDPLLQEKF 414

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F +E++ +     E +  DEDF+  L   MP   G+ +G DRL ML+TG  +I EVI  P
Sbjct: 415 FREEVERRTLGDEEAHQYDEDFIEALRWGMPPMGGVGIGIDRLTMLLTGNTSIKEVILFP 474

Query: 347 FSQSNQ 352
                +
Sbjct: 475 ILAPKK 480


>gi|315605849|ref|ZP_07880881.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315312547|gb|EFU60632.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 539

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 147/369 (39%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--------NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQF 41
           +  +P             + D   RRR             +  R  +  S+RE F    +
Sbjct: 175 LRPLPKTWTTEDGEEVTLSEDQRIRRRELDLITRPAARDMIRVRAAVNRSIRENFFRRDY 234

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           IE+++  LQ   G     R F+T +   + +   LYL+ + E   K+ +  G +++F   
Sbjct: 235 IELETPMLQVIHGGAA-ARPFTTHM---NALDMELYLRIATEIYLKRAVVGGVDRVFEMN 290

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +RN      H PEFT LE Y A+  Y  +     ++I+ AA  A       + V    
Sbjct: 291 RNFRNEGMDSSHSPEFTSLEAYEAYSDYNGMALLTRDLIQQAARDAFGLPEGEEIVRLAD 350

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +E +     +    Y +       +   +  R  L   A++ G+ V        I   I
Sbjct: 351 GTEYDLSGQWDRIDLYGSTSEALGEEVTVETPRETLVTYAERVGLEVDDYAVSGKIVEDI 410

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E +     +   T +  +P   S L   + + P  T++++LY    E   A  EL DP
Sbjct: 411 FEELVASK--LWAPTFVYDFPEDTSPLTRYHRSRPGLTEKWDLYVRGFETATAYSELADP 468

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           + QR RFE +         E   +DEDFL  +    P   G+ MG DRL+M++TG   I 
Sbjct: 469 VVQRERFEAQALAAANGDPEAMVMDEDFLIAMEQGFPPCGGMGMGIDRLLMVLTGQG-IR 527

Query: 341 EVIWTPFSQ 349
           E I  P  +
Sbjct: 528 ETIPFPLVK 536


>gi|227494387|ref|ZP_03924703.1| lysine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226832121|gb|EEH64504.1| lysine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 521

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/339 (27%), Positives = 144/339 (42%), Gaps = 16/339 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
                R  +  R  +  SLREYF +  FIEI++  LQ   G     R F T +   +   
Sbjct: 194 VRPAARDMVRMRAKVVRSLREYFDQAGFIEIETPMLQNIHGGAA-ARPFQTHM---NAYD 249

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
             L+L+ +PE   K+ +  G EK+F     +RN      H PEFTMLE Y A+ +Y+ + 
Sbjct: 250 TELFLRIAPELFLKRAVVGGIEKVFEINRNFRNEGADSSHSPEFTMLEAYEAYGTYDTMA 309

Query: 134 KDCMNIIRCAAEVANQ--KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     I+ AA  A    K+        +     + I++ +  +     ++         
Sbjct: 310 QRTREFIQKAARDAFGSEKVILADGSEYDLSGSWKSISLYDCVSEAVGEEITPD------ 363

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                L   A +  I  A       I   I    +  +  I   T +  YP   S L   
Sbjct: 364 TSIERLREIADEREIGYADHAVAGKIVEEIFEATVGDH--IWEPTFVRDYPVDTSPLVRQ 421

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
           + + P   ++++LY    EL  A  EL+DP+ QR RFE +         E   +DEDFL 
Sbjct: 422 HRSLPGRVEKWDLYVRGFELATAYSELVDPVVQRERFEAQALAAANGDPEAMVLDEDFLE 481

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +   MP + G+ MG DRL+M +TG   I E I  P ++
Sbjct: 482 AMEQGMPPTGGMGMGLDRLLMALTGQG-IRETITFPLTK 519


>gi|72389957|ref|XP_845273.1| lysyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62359254|gb|AAX79696.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70801808|gb|AAZ11714.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 634

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 93/358 (25%), Positives = 159/358 (44%), Gaps = 25/358 (6%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + D  YR R             + KR+ +  SLREY     F+E+++  L        + 
Sbjct: 189 DNDVRYRYRFVDMMTNRSVIDTIRKRHTVLQSLREYLDMRHFVEVETPILHTVASGA-NA 247

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           + F T     +     L+L+ +PE   K+ +  G E+++     +RN +    H PEFT 
Sbjct: 248 KPFVTH---HNANNADLFLRVAPELYLKQCVVGGLERVYEIGKVFRNEDADRSHNPEFTT 304

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE-------PEYITVAE 172
            E+Y A+ +YE L+    +I R  A  AN              +           I+V +
Sbjct: 305 CEFYAAYHTYEDLITMTEDIFRHLALRANGTTQLQIQCERAGITREIDLGATFRRISVYD 364

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                + ++L    +         +     +  I+     T + +F +++   I  +  I
Sbjct: 365 EIQSASGVELPPPNELNTPKGLAYMSAIMLRHDIQFPAVRTAAKMFDKLIDFFITSH--I 422

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
              T +  +P   S LA  + + P   +RFEL+   IE CNA  EL DP EQ HRF++++
Sbjct: 423 VEPTFVMDHPIFMSPLAKEHSSRPGLAERFELFINGIEYCNAYSELNDPQEQCHRFQQQL 482

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +++    E  P+DE FL  L   +P ++G  MG DR+VML++G++ I + I  P  +
Sbjct: 483 IDRQGGDEEAMPLDETFLKSLQVGLPPTAGWGMGIDRVVMLLSGSSTIRDGIIFPLLR 540


>gi|300933244|ref|ZP_07148500.1| lysyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 1113

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 91/385 (23%), Positives = 150/385 (38%), Gaps = 43/385 (11%)

Query: 1    MHQIPSQPWWN--RDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
            +H +P +       +   R R             L  R+ + +++R   V+  ++E+++ 
Sbjct: 736  LHPLPDKRKGLQNPETRLRNRHLDMTLNPGVMQSLRTRSAVLNAMRSELVQRDYLEVETP 795

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   + R F T     +     LYL+ +PE   K+L+  G  K+F     +RN 
Sbjct: 796  ILQPIHGGA-NARPFRT---YINAYDMDLYLRIAPELYLKRLMCGGAPKVFELGRDFRNE 851

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN---CNPFSE 164
                 H PEFT+LE Y AH  Y  +M     +I  AA   + +       +    +   E
Sbjct: 852  GADNKHNPEFTVLEAYEAHGDYRTMMDLTRRLICAAATAVHGQPVIRDPRSGELVDISGE 911

Query: 165  PEYITVAEAFARYA-------------------NIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                +V  +                        + ++          D   L   A+  G
Sbjct: 912  WPVRSVIGSINEALAQRALASTGQTSRTASHESDTEIAPCTTIGLDTDIDQLRKIAETVG 971

Query: 206  IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
            +          I   I  E +E        T    +PA  S L   +P +P   +R++L 
Sbjct: 972  LHPQAAWDEGKIIEEIYGELVEDT--TTLPTFYIDFPASVSPLTRPHPENPNLCQRWDLV 1029

Query: 266  ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
            A  +EL  A  EL DP+ QR R E++         E   +DEDFL  L   MP + G+ +
Sbjct: 1030 AFGMELGTAYSELTDPLLQRERLEQQSLLAAGGDAEAMEVDEDFLRALEFGMPPAGGLGL 1089

Query: 325  GFDRLVMLVTGANNINEVIWTPFSQ 349
            G DR++ML+ G  ++ E +  P  +
Sbjct: 1090 GIDRIIMLING-GSMRENLAFPLVK 1113


>gi|303284285|ref|XP_003061433.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456763|gb|EEH54063.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 521

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 84/392 (21%), Positives = 153/392 (39%), Gaps = 50/392 (12%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R  I S +R +  +  F+E+++ 
Sbjct: 140 LLPLPDKFKGLTDVETRYRQRYLDLIASPEVRDVFRTRAGIVSGIRRFLDDRAFMEMETP 199

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L+   G     + FST     + +   L L+ + E   K+L+  G E+++     +RN 
Sbjct: 200 VLESRAGGA-DAKPFST---FHNALGMDLTLRIATELHLKRLVVGGFERVYEMGRIFRNE 255

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR---CAAEVANQKIFSFQNVNCNPF-- 162
                H PEFT +E Y+A+     +++   ++I      A   N+ +             
Sbjct: 256 GISTRHNPEFTSVEVYQAYADVSDMLELTEDMICAAAERACPGNENLSIPYGDEIIHLGK 315

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
                 ++ +    Y   +    +       +    L        V    T   + + + 
Sbjct: 316 RPWRRESMNDLVKEYTG-ECALDIMGTFGETKDAQSLAGI---PNVQKSPTVGHVLNEMF 371

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +E    +   T +  +P   S LA  + + P  T+RFEL+    EL N+  EL DP+
Sbjct: 372 EACVETK--LRQPTFVLDHPVEISPLAKPHRSKPGVTERFELFIVGRELANSFSELTDPV 429

Query: 283 EQRHRFEKEMQE----------------KKKI-----YNETYPIDEDFLACLT-EMPQSS 320
           +QR R E ++                  K+ +      +    +DEDF+  L   MP + 
Sbjct: 430 DQRKRLEGQIATHAKARSEARAAAEAQGKEALRAFEDDDYPIELDEDFVTALEYGMPPTG 489

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           G+ +G DRLVML+T + +I +VI  P  +  +
Sbjct: 490 GMGLGVDRLVMLLTNSASIRDVIAFPLLKKQE 521


>gi|146093432|ref|XP_001466827.1| lysyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134071191|emb|CAM69876.1| putative lysyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 536

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 88/361 (24%), Positives = 153/361 (42%), Gaps = 25/361 (6%)

Query: 8   PWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNE 56
           P  +    YR R               KR+ I  +LR++     F+E+++  L       
Sbjct: 87  PLTDTGIKYRYRFVDMMSSPSVVQRFRKRHAITRALRDFLDARSFVEVETPVLHSVASGA 146

Query: 57  THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            + + F T     +     L+L+ +PE   K+ +  G E+++     +RN +    H PE
Sbjct: 147 -NAKPFVTH---HNANDADLFLRVAPELHLKQCVVGGMERVYEIGRVFRNEDADRSHNPE 202

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-------IFSFQNVNCNPFSEPEYIT 169
           FT  E+Y A+ +Y+ LM     I+R  A  AN             + V  +       + 
Sbjct: 203 FTTCEFYAAYHTYKDLMTMTEEILRHLALAANGTTKITVTSCVEKKPVEIDLAQPFRRVN 262

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A    A ++L    +         +     +  I +    T + +F +++   I   
Sbjct: 263 AYDAVQEAAGVELPPPTELSTPRGLAYMSAIMLRYNIPLPSVRTAAKMFDKLIDYFI--T 320

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  +P   S LA      P  + RFEL+    E CNA  EL DP EQ +RF+
Sbjct: 321 DRVVEPTFVTDHPLFMSPLAMEQRTRPGLSARFELFINGTEYCNAYSELNDPQEQYYRFQ 380

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +++ +++   +E   +DE FL  L   +P ++G  MG DR+ ML+ G++ I E I  P  
Sbjct: 381 QQLLDRQTGDDEAMALDETFLKALQVGLPPTAGWGMGIDRVAMLLNGSSTIREDILFPLL 440

Query: 349 Q 349
           +
Sbjct: 441 R 441


>gi|29840596|ref|NP_829702.1| lysyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301684|sp|Q821U6|SYK_CHLCV RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|29834946|gb|AAP05580.1| lysyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 525

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 89/369 (24%), Positives = 160/369 (43%), Gaps = 33/369 (8%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R               KR+ I   +R+Y     F+E+++  LQ
Sbjct: 160 LPDKHAGLSDKEIRYRKRWLDLISSDEVRQTFFKRSRIIKLIRQYMDAQGFMEVETPILQ 219

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G       F T L   + +   ++L+ S E + KK+L  G  +++     +RN    
Sbjct: 220 NIYGGA-EATPFVTTL---NALHSEVFLRISLEIALKKILVGGTSRVYEIGKVFRNEGID 275

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-------KIFSFQNVNCNPFS 163
             H PEFTM+E Y A+  Y  +M    N++       N                  +  +
Sbjct: 276 RTHNPEFTMIEAYAANVDYHSVMTYVENLVEYLVCALNDGSTVLTYSHLKQGPQTVDFKA 335

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +T+ ++   Y ++D+    D+  +          +++          + +F  ++ 
Sbjct: 336 PWIRMTMKDSIKTYGDVDVDLHADHELRNILKERTSLPEESYATAPRGLLITALFDELVC 395

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPI 282
           +K      +     +  +P   + L     + D  F +RFE +    ELCNA  EL DP+
Sbjct: 396 DK------LIAPHHITDHPIETTPLCKSLRSGDADFVERFESFCLGKELCNAYSELNDPL 449

Query: 283 EQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
            QR   EK+M++K     +E +PIDE+FL  L   MP + G  +G DRLVM++T A +I 
Sbjct: 450 HQRMLLEKQMEKKALDPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMILTDAASIR 509

Query: 341 EVIWTPFSQ 349
           +V++ P  +
Sbjct: 510 DVLYFPAMR 518


>gi|15922404|ref|NP_378073.1| lysyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|15623193|dbj|BAB67182.1| 444aa long hypothetical lysyl-tRNA synthetase [Sulfolobus tokodaii
           str. 7]
          Length = 444

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 88/339 (25%), Positives = 153/339 (45%), Gaps = 19/339 (5%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R  +  R +I   +REY     FIE+++  LQ   G     + F + +   +++ +  YL
Sbjct: 114 RKAMEIRFLIIRLIREYLYSKGFIEVETPILQPVYGGA-LAKPFKSHV---NYLEEDWYL 169

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + S E   K+ +  G  K+F     +RN +    H PEFT++E Y A+  Y  +M+   +
Sbjct: 170 RISLELYLKRFIVGGFNKVFEIGKVFRNEDIDVTHNPEFTLMELYWAYADYNDIMRLTED 229

Query: 139 IIRCAAEVANQ----KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
           +++   +        K           FS+ + +T+ +A +            N +    
Sbjct: 230 MLQYVVKSIFHDTKIKYTISGKDYEIDFSQFKKVTIYDALSEALG-------KNVENVSD 282

Query: 195 HLLYLQAQQAGIRVAHDDTWSDI-FSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
             L     + G++   +     +   ++  + +EPN  +   T +  YP   + L   + 
Sbjct: 283 EELKNLMDKYGLKPRGNMYIRGLMIEKLFDKLVEPN--LIQPTFILDYPIETTPLCKPHR 340

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           + P   +RFEL+   +EL NA  EL DPI Q   F++E +  ++   E +P D DF+  L
Sbjct: 341 SKPGLVERFELFIAGMELANAYTELNDPILQDKLFKQEQEMFRRGDEEAHPYDVDFVRAL 400

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
              MP + G+ +G DRLVML+T   +I EVI  P   S 
Sbjct: 401 SYGMPPTGGLGIGIDRLVMLLTNNYSIKEVIPFPMLSSK 439


>gi|261328660|emb|CBH11638.1| lysyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 634

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 93/358 (25%), Positives = 159/358 (44%), Gaps = 25/358 (6%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + D  YR R             + KR+ +  SLREY     F+E+++  L        + 
Sbjct: 189 DNDVRYRYRFVDMMTNRSVIDTIRKRHTVLRSLREYLDMRHFVEVETPILHAVASGA-NA 247

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           + F T     +     L+L+ +PE   K+ +  G E+++     +RN +    H PEFT 
Sbjct: 248 KPFVTH---HNANNADLFLRVAPELYLKQCVVGGMERVYEIGKVFRNEDADRSHNPEFTT 304

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE-------PEYITVAE 172
            E+Y A+ +YE L+    +I R  A  AN              +           I+V +
Sbjct: 305 CEFYAAYHTYEDLITMTEDIFRHLALRANGTTQLQIQCERAGITREIDLGATFRRISVYD 364

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                + ++L    +         +     +  I+     T + +F +++   I  +  I
Sbjct: 365 EIQSASGVELPPPNELNTPKGLAYMSAIMLRHDIQFPAVRTAAKMFDKLIDFFITSH--I 422

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
              T +  +P   S LA  + + P   +RFEL+   IE CNA  EL DP EQ HRF++++
Sbjct: 423 VEPTFVMDHPIFMSPLAKEHSSRPGLAERFELFINGIEYCNAYSELNDPQEQCHRFQQQL 482

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +++    E  P+DE FL  L   +P ++G  MG DR+VML++G++ I + I  P  +
Sbjct: 483 IDRQGGDEEAMPLDETFLKSLQVGLPPTAGWGMGIDRVVMLLSGSSTIRDGIIFPLLR 540


>gi|322500960|emb|CBZ36036.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 536

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 88/361 (24%), Positives = 153/361 (42%), Gaps = 25/361 (6%)

Query: 8   PWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNE 56
           P  +    YR R               KR+ I  +LR++     F+E+++  L       
Sbjct: 87  PLTDTGIKYRYRFVDMMSSPSVVQHFRKRHAITRALRDFLDARSFVEVETPVLHSVASGA 146

Query: 57  THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            + + F T     +     L+L+ +PE   K+ +  G E+++     +RN +    H PE
Sbjct: 147 -NAKPFVTH---HNANDADLFLRVAPELHLKQCVVGGMERVYEIGRVFRNEDADRSHNPE 202

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-------IFSFQNVNCNPFSEPEYIT 169
           FT  E+Y A+ +Y+ LM     I+R  A  AN             + V  +       + 
Sbjct: 203 FTTCEFYAAYHTYKDLMTMTEEILRHLALAANGTTKITVTSCVEKKPVEIDLAQPFRRVN 262

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A    A ++L    +         +     +  I +    T + +F +++   I   
Sbjct: 263 AYDAVQEAAGVELPPPTELSTPRGLAYMSAIMLRYNIPLPSVRTAAKMFDKLIDYFI--T 320

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  +P   S LA      P  + RFEL+    E CNA  EL DP EQ +RF+
Sbjct: 321 DRVVEPTFVTDHPLFMSPLAMEQRTRPGLSARFELFINGTEYCNAYSELNDPQEQYYRFQ 380

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +++ +++   +E   +DE FL  L   +P ++G  MG DR+ ML+ G++ I E I  P  
Sbjct: 381 QQLLDRQTGDDEAMALDETFLKALQVGLPPTAGWGMGIDRVAMLLNGSSTIREDILFPLL 440

Query: 349 Q 349
           +
Sbjct: 441 R 441


>gi|254443736|ref|ZP_05057212.1| lysyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198258044|gb|EDY82352.1| lysyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 521

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 148/366 (40%), Gaps = 34/366 (9%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ I S +R Y  + +F+E+++ 
Sbjct: 174 LRPLPEKFHGLTDAEQKYRQRHLDLIMNKESRERFFNRSRIVSGIRRYLEDRKFLEVETP 233

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             Q   G     + F T     + + +  +++ S E   K+LL  G +++F     +RN 
Sbjct: 234 VFQNIAGGAA-AKPFVTH---HNTLDRDFFMRISLELYLKRLLVGGYDRVFEIGRNFRNE 289

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFS-EP 165
                H PEFTMLE Y+A+  Y  +M+    +IR    ++   K     +     F  E 
Sbjct: 290 GISRRHNPEFTMLEVYQAYSDYRGMMELIQGLIRHLVTDILGGKEIKMPDGEVIDFMGEW 349

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
                 +               +     +     +A++ G+    D    ++ +    + 
Sbjct: 350 REAKYKDLVCEKVG------DPDWFSKSKEEKIAKAKELGLDCQADWEDYEVTNEAFGKL 403

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           IEP   +   T +   P     LA I   D      FEL    +E+  A  E  DP  QR
Sbjct: 404 IEP--FLIQPTFVTHLPKELCPLAKITKDDDSTIDVFELCIGGMEIAPAYSEQNDPDVQR 461

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             FEK+         ET  +DEDFL  L   MP + G+ MG DR+V+L+T A NI +VI 
Sbjct: 462 EMFEKQA------GEETQDMDEDFLETLEYGMPPAGGLGMGIDRIVILLTEAENIRDVIL 515

Query: 345 TPFSQS 350
            P  +S
Sbjct: 516 YPQLRS 521


>gi|323442037|gb|EGA99672.1| lysyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 464

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 83/335 (24%), Positives = 141/335 (42%), Gaps = 27/335 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I   +R Y     F+E+++ 
Sbjct: 142 LRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETP 201

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LY++ + E   K+L+  G EK++     +RN 
Sbjct: 202 MMHQIAGGAA-ARPFVTH---HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNE 257

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  +M    +++R  A  V       +     +  S   
Sbjct: 258 GVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWT 317

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D        +          A++ GI +     +  I +    +K+
Sbjct: 318 RLHIVDAVKEATGVD------FYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKV 371

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+Q+ 
Sbjct: 372 EET--LIQPTFIYGHPTEISPLAKKNPEDTRFTDRFELFIVGREHANAFTELNDPIDQKG 429

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           RFE ++ EK +  +E + +DED++  L   MP + 
Sbjct: 430 RFEAQLVEKAQGNDEAHEMDEDYIEALEYGMPPTG 464


>gi|187735301|ref|YP_001877413.1| lysyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425353|gb|ACD04632.1| lysyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 493

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 81/363 (22%), Positives = 149/363 (41%), Gaps = 26/363 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+++ + +R +  E  ++E+++ 
Sbjct: 139 LRPLPDKWHGLADKEVTYRKRHLDLISNEESASLFVTRSLMIAEIRRFLQERGYLEVETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     + F T     + +  PL L+ +PE   K+L+  G  KIF    ++RN 
Sbjct: 199 MLQDVAGGAA-AKPFET---YHNALDMPLTLRIAPELFLKRLMVGGFTKIFELNRSFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE Y A   +E +      +I   AE     +                
Sbjct: 255 GIDRRHNPEFTMLEAYCACGDFETMANMVEELICHLAEKFCGGLQIDHKDAEGNVLYTID 314

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           ++     A Y ++  G   ++           + ++ G+ ++ D    D+  ++  + +E
Sbjct: 315 LSRPWRRADYQDLIRGVAGEDWFDISPEARRARCEELGVEISPDMKDVDVSQQVYEKLVE 374

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                     +         LA +   +P     +EL     E+     EL DP  Q+ R
Sbjct: 375 EK--TMNPCFVTHVAKDLVPLAKLNRENPDVVDVYELVINGQEISPGYSELNDPDVQKER 432

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E +         ET  +D DF+  L   MP + GI +G DR+VM++TGA++I +V+  P
Sbjct: 433 LEHQAA------GETQRVDYDFIETLEYGMPSAGGIGIGIDRVVMMLTGASSIRDVLLFP 486

Query: 347 FSQ 349
             +
Sbjct: 487 QLK 489


>gi|171914137|ref|ZP_02929607.1| lysyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 487

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 147/365 (40%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWNRDF-------------HYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D              + R R   ++R+++ + +R +  +  F+E+++ 
Sbjct: 135 LRPLPDKWHGVTDREIKYRQRYLDLISNERSRDTFVQRSLMVAEIRRFLQDRGFLEVETP 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG       F T       +   +YL+ +PE   K+LL  G  KIF     +RN 
Sbjct: 195 MMQDVPGGAA-ATPFETFFK---ALNMAMYLRIAPELFLKRLLVGGFTKIFELNRNFRNE 250

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE Y A   +EQ+     +++   AE     +      +    +    
Sbjct: 251 GLSRRHNPEFTMLEAYWAFSDFEQMADLVESMVCHLAEKFCGGLLIEHKDDEGNVTRTIN 310

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +      A Y  +  G   +   +        +  + G+ V+      ++  ++  + IE
Sbjct: 311 LQRPWRRAPYKELIKGVAGEGWFELSLDDKKAKCAELGVEVSGGMVDYEVSQQVFEKLIE 370

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                     +   PA    LA    AD      +EL     E+     EL DPI QR R
Sbjct: 371 EKSFD--PLFVTHVPAELVPLAKQNKADGSVVDVYELVINGQEISPGYSELNDPIVQRER 428

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E +         ET  +DE+FL  L   MP + GI +G DRLVM++TGA +I +V+  P
Sbjct: 429 LEHQA------GEETQKVDEEFLLALEYGMPSAGGIGIGIDRLVMMLTGAESIRDVVLFP 482

Query: 347 FSQSN 351
             +  
Sbjct: 483 QLKKR 487


>gi|284989232|ref|YP_003407786.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284062477|gb|ADB73415.1| lysyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 528

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 80/363 (22%), Positives = 138/363 (38%), Gaps = 24/363 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   RRR             + +R  + ++LR       ++E+++  
Sbjct: 174 LRPLPVAHKPMSEELRVRRRYVDLIVRDEARRTVRQRATVMATLRRELATRGYLEVETPM 233

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T +   +     LYL+ +PE   K+ +  G E++F     +RN  
Sbjct: 234 LQTVHGGAA-ARPFRTHM---NAFDLDLYLRIAPELFLKRCIVGGLERVFEINRNFRNEG 289

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+  Y+ +      + +           +  N      +E +  
Sbjct: 290 VDSTHSPEFAMLEAYQAYADYQAMATLTRELTQECCGALFGDHVARHND----GTEIDLS 345

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                   Y  +      +         L   A +  + V        +   +    ++ 
Sbjct: 346 GEWRQVPLYTLVSDAVGEEVTPGTPLETLRALAARHDVGVDPAWIPGKVVEELFEALVQD 405

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +  +   T +  YP   S L   + + P   ++++LY   +E   A  EL+DP+ QR R 
Sbjct: 406 S--LQEPTFVVDYPLDTSPLTRAHRSQPGLAEKWDLYIAGVERATAYSELVDPVAQRERL 463

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +     +   E    DEDFL  L   MP + G+ MG DRL+M +TG   I E I  P 
Sbjct: 464 VAQAVLAAEGDPEAMAFDEDFLEALEYGMPPTGGMGMGMDRLMMTLTGLG-IRETILFPL 522

Query: 348 SQS 350
            + 
Sbjct: 523 VRP 525


>gi|15618840|ref|NP_225126.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|16752102|ref|NP_445469.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33242296|ref|NP_877237.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|11387161|sp|Q9Z6X5|SYK_CHLPN RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|4377254|gb|AAD19069.1| Lysyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189844|gb|AAF38715.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33236807|gb|AAP98894.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 527

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 92/372 (24%), Positives = 166/372 (44%), Gaps = 33/372 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I   +R Y   + F+E+++ 
Sbjct: 158 LLSLPDKHAGLSDKEVRYRKRWLDLISSREVSDTFVKRSYIIKLIRNYMDAHGFLEVETP 217

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     + F+T +   + +   ++L+ S E + KK+L  G  +I+     +RN 
Sbjct: 218 ILQNIYGGA-EAKPFTTTM---EALHSEMFLRISLEIALKKILVGGAPRIYELGKVFRNE 273

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-------IFSFQNVNCN 160
                H PEFTM+E Y A+  Y+++M    N++       N          +       +
Sbjct: 274 GIDRTHNPEFTMIEAYAAYMDYKEVMVFVENLVEHLVRAVNHDNTSLVYSYWKHGPQEVD 333

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +    +T+ E+ A YA ID+    D   +          + A    +     + +F  
Sbjct: 334 FKAPWIRMTMKESIATYAGIDVDVHSDQKLKEILKKKTTFPETAFATASRGMLIAALFDE 393

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELL 279
           ++ +       +     +  +P   + L     + D  F +RFE +    ELCNA  EL 
Sbjct: 394 LVSD------NLIAPHHITDHPVETTPLCKTLRSGDTAFVERFESFCLGKELCNAYSELN 447

Query: 280 DPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
           DPI QR   E++  +K+ +  +E +PIDE+FL  L   MP + G  +G DRLVM++T A 
Sbjct: 448 DPIRQRELLEQQHTKKELLPDSECHPIDEEFLEALCQGMPPAGGFGIGVDRLVMILTNAA 507

Query: 338 NINEVIWTPFSQ 349
           +I +V++ P  +
Sbjct: 508 SIRDVLYFPVMR 519


>gi|326773885|ref|ZP_08233167.1| lysine--tRNA ligase [Actinomyces viscosus C505]
 gi|326636024|gb|EGE36928.1| lysine--tRNA ligase [Actinomyces viscosus C505]
          Length = 562

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 91/370 (24%), Positives = 152/370 (41%), Gaps = 29/370 (7%)

Query: 1   MHQIPSQPWWNR---------DFHYRRRP-----------FLLKRNMIQSSLREYFVENQ 40
           +  +P + W N          +   RRR             +  R  +  S+RE F    
Sbjct: 199 LRPLP-KTWTNEAGEAVTLSEEQRVRRRELDLLTRPAARDMVRTRAAVVRSIRENFFRRD 257

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           ++E+++  LQ   G     R F T +   +     LYL+ + E   K+ +  G +++F  
Sbjct: 258 YLELETPMLQVIHGGAA-ARPFITHM---NAFDMDLYLRIATEIYLKRAVVGGVDRVFEI 313

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT LE Y A+  Y+ + +   N+++ AA  A       + V   
Sbjct: 314 NRNFRNEGADSSHSPEFTALEAYEAYSDYDGMAELTRNLVQQAARDAFDLPEGGEVVTLA 373

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +E +     +    Y ++      +   +  R  L   A++ G+ +        +   
Sbjct: 374 DGTEYDLSGEWDKIDLYTSVSEALGEEITVETPREQLVAYAEKIGLEIDDYAVAGKVVED 433

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           I  E +     +   T +  +P   S L   + + P  T++++LY    E   A  EL D
Sbjct: 434 IFEELVGNK--LWAPTFVYDFPEDTSPLTRYHRSKPGLTEKWDLYVRGFETATAYSELAD 491

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P+ QR RFE +     K   E   +DEDFL  +    P S G+ MG DRL+M++TG   I
Sbjct: 492 PVVQRERFEAQALAAAKGDPEAMILDEDFLVAMEQGFPPSGGMGMGIDRLLMVLTGQG-I 550

Query: 340 NEVIWTPFSQ 349
            E I  P  +
Sbjct: 551 RETITFPLVK 560


>gi|154341393|ref|XP_001566648.1| lysyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063973|emb|CAM40163.1| putative lysyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 536

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 94/361 (26%), Positives = 158/361 (43%), Gaps = 25/361 (6%)

Query: 8   PWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNE 56
           P  + D  YR R               KR+ I  +LR+Y     FIE+++  L       
Sbjct: 87  PLTDTDIKYRYRFVDMMSNPSVLQHFRKRHAITRALRDYLDARSFIEVETPVLHSVASGA 146

Query: 57  THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
           +  R F T     +     L+L+ +PE   K+ +  G E+++     +RN +    H PE
Sbjct: 147 S-ARPFITH---HNANGADLFLRVAPELHLKQCVVGGMERVYEIGRVFRNEDADRSHNPE 202

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-------IFSFQNVNCNPFSEPEYIT 169
           FT  E+Y A+ +YE LM     I+R  A  AN           + + V  +       ++
Sbjct: 203 FTTCEFYAAYHTYEDLMVMTEEIMRHLALAANGTTKVVVTSCVAKEPVEIDFEQPFRRVS 262

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A    A ++L    +         +     +  I +    T + +F +++   I   
Sbjct: 263 AYDAVQEAAGVELPPPTELNTPRGLAYMSAIMLRYNIPLPSVRTAAKMFDKLIDYFI--T 320

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  +P   S LA    A P  + RFEL+   IE CNA  EL DP EQ +RF+
Sbjct: 321 DRVVEPTFVTGHPLFMSPLAMEQRARPGLSARFELFINGIEYCNAYSELNDPQEQYYRFQ 380

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +++ +++   +E   +DE FL  L   +P ++G  MG DR+V L+ G+ +I + I  P  
Sbjct: 381 QQLLDRQTGDDEAMALDETFLKALQAGLPPTAGWGMGIDRVVTLLNGSASIRDGILFPLL 440

Query: 349 Q 349
           +
Sbjct: 441 R 441


>gi|220911109|ref|YP_002486418.1| lysyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219857987|gb|ACL38329.1| lysyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 512

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 84/364 (23%), Positives = 137/364 (37%), Gaps = 25/364 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R             +  R  I  S+RE    ++++E+++  
Sbjct: 159 LRPLPVLHAELNEETRVRQRYVDLMVRDEAREMVYTRAAITRSIRETLFRHRYVEVETPI 218

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T +   +   + + L+ + E   K+ +  G ++++     +RN  
Sbjct: 219 LQLVHGGA-LARPFETHM---NAFDQKMTLRIATELYLKRAVVGGIDRVYDMGRVFRNEG 274

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT LE Y A      + +    II  AA+                  E    
Sbjct: 275 VDSTHSPEFTTLECYEAWADQFVMAERIKEIILDAADAVGA-----GRTVQTEAGEINLD 329

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                 A Y  +      +        +L   A +  ++V            +  E +EP
Sbjct: 330 GDWAWLAVYPGLSDAVGQEITPDTPLEVLRDIAAKHEVKVDPKWDAEKTVVELFGEIVEP 389

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP     LA  +  D R  + ++L    +E   A  EL+DP+ QR R 
Sbjct: 390 T--LLNPTFVYDYPPSAQPLARPHREDGRLIEAWDLIIGGMERGTAFSELIDPVIQRERL 447

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++ +      +E   +DEDFL  L    P   GI +G DRLVML TGA  I E I  P 
Sbjct: 448 TEQSRHAAAGDDEAMQLDEDFLRALEYGAPPMGGIGLGIDRLVMLFTGAG-IRETILFPL 506

Query: 348 SQSN 351
            +  
Sbjct: 507 LKPE 510


>gi|89897981|ref|YP_515091.1| lysyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123749549|sp|Q255U2|SYK_CHLFF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|89331353|dbj|BAE80946.1| lysyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 526

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 159/369 (43%), Gaps = 33/369 (8%)

Query: 4   IPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P +     +++  YR+R              LKR+ I   +R+Y     FIE+++  LQ
Sbjct: 161 LPDKHAGLSDKETRYRKRWLDLICSDEVRQTFLKRSRIIKLIRQYMDAQDFIEVETPILQ 220

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G       F T L   + +   ++L+ S E + KK+L  G  +++     +RN    
Sbjct: 221 NIYGGA-EATPFVTTL---NALHSDMFLRISLEIALKKILVGGTPRVYEIGKVFRNEGID 276

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-------QKIFSFQNVNCNPFS 163
             H PEFTM+E Y  +  Y  +M    N+I       N                  +  +
Sbjct: 277 RTHNPEFTMIEAYAMNIDYHSVMVYVENLIEYLVGELNNGSTVLTYSHLKQGPQTIDFKA 336

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +T+ ++   Y  +D+    D+  +          +++          + +F  ++ 
Sbjct: 337 PWIRMTMKDSIKTYGGVDVDLHGDHELRNILKERSSLPEESYATAPRGLLIAALFDELVC 396

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPI 282
           +K      +     +  +P   + L     + +  + +RFE +    ELCNA  EL DP+
Sbjct: 397 DK------LIAPHHITDHPLETTPLCKSLRSGEEDYVERFESFCLGKELCNAYSELTDPM 450

Query: 283 EQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
            QR   EK+M++K     +E +PIDE+FL  L   MP + G  +G DRLVM++T + +I 
Sbjct: 451 RQRMLLEKQMEKKALDPDSEYHPIDEEFLEALCQGMPPAGGFGIGIDRLVMILTDSASIR 510

Query: 341 EVIWTPFSQ 349
           +V++ P  +
Sbjct: 511 DVLYFPVMR 519


>gi|326422505|gb|EGD71901.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidophilus ARMAN-5_'5-way FS']
          Length = 476

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 165/367 (44%), Gaps = 34/367 (9%)

Query: 1   MHQIPSQPWWNRDF--HYRRR--PFLLKR---------NMIQSSLREYFVENQFIEIDSM 47
           +  +P + +   D    +R+R    ++ R         +++ S +RE   +  + E+   
Sbjct: 130 LLPLPPRWYGLEDTEKRFRKRYLDLIINRESMEKIKKGSIMVSKIREILGKKGYTEVVVP 189

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG   + + F T     + + +  YL+ + E   K+LL  G EK+F  +  +RN 
Sbjct: 190 ILQPIPGGA-NAKPFITHY---NSLDRDFYLKIASELYLKRLLVGGFEKVFDISKNFRNE 245

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEF MLE Y+A+     +++    II+ A   AN             FS+ E 
Sbjct: 246 GIDTRHNPEFMMLEAYQAYGDLSSMLELTEEIIKEAIYAANGTYSIKFGEKNIDFSKFEI 305

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            T+ E       ++                    ++  +  +  +++ +  + I   +I 
Sbjct: 306 KTMEEMVKEKTGVNND--------------QEIIKRGKVLDSKVESYGEAINAIFEAEIS 351

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            N  I     + ++P   S LA     DPRF  RFELY   +E+ NA  EL +PIEQ  R
Sbjct: 352 DN--IINPVFVTKFPIEVSPLAKNMEDDPRFVYRFELYIAGMEIANAFSELNNPIEQIKR 409

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE+E + K K  +ET   D+DF+  L   MP + G+ +G DR+ ML T + +I EVI  P
Sbjct: 410 FEEEARRKNKGIDETQEFDKDFIEALGYGMPPTGGVGIGIDRIQMLGTNSKSIKEVIPFP 469

Query: 347 FSQSNQE 353
             ++ ++
Sbjct: 470 QLRTFED 476


>gi|41406557|ref|NP_959393.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|41394906|gb|AAS02776.1| LysS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 499

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 81/365 (22%), Positives = 145/365 (39%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               +R  +  ++R       F+E+++  
Sbjct: 144 LRPLPVAHKEMSEEARVRQRYVDLIVRPQARTVARQRIAVIRAIRNALERRGFLEVETPM 203

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +K+F     +RN  
Sbjct: 204 LQTLAGGAA-ARPFVTHS---NALDIDLYLRIAPELFLKRCVVGGFDKVFELNRVFRNEG 259

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF+MLE Y+A+ +Y+        +I+        +    + +     S  +  
Sbjct: 260 ADSTHSPEFSMLETYQAYGTYDDSAVVTRELIQE----VADEAIGTRQLPLPDGSVYDID 315

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKI 226
               +   Y ++      +   Q     L   A++ G+ +  D       I   +    +
Sbjct: 316 GEWASIEMYPSLSAALGEEITPQTTVEKLLGIAERLGVEIPRDRGYGHGKIVEELWEHTV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +P   + L   + +    T++++LY   +EL     EL DP+ QR 
Sbjct: 376 GDT--LTAPTFVRDFPVETTPLTRQHRSIDGVTEKWDLYVRGVELATGYSELTDPVVQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +      +E   +DEDFLA L   MP  +G  MG DRL+M +TG  +I E +  
Sbjct: 434 RFAAQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMTLTGL-SIRETVLF 492

Query: 346 PFSQS 350
           P  + 
Sbjct: 493 PIVRP 497


>gi|302816978|ref|XP_002990166.1| hypothetical protein SELMODRAFT_272117 [Selaginella moellendorffii]
 gi|300142021|gb|EFJ08726.1| hypothetical protein SELMODRAFT_272117 [Selaginella moellendorffii]
          Length = 536

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 88/360 (24%), Positives = 151/360 (41%), Gaps = 28/360 (7%)

Query: 13  DFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
           +  YR R             L   +   + +R +  +  F E+++  L    G     R 
Sbjct: 172 ETRYRLRFLDIIVNPEVKFVLETAHSAVNYIRSFLDQRGFREVETAILNSKAGGAA-ARP 230

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F+T     D     + L+ +PE   K+LL AG   ++     +RN      H PEFT  E
Sbjct: 231 FNTH---HDASEMDMSLRIAPELQLKQLLVAGYNGVYEVDKQFRNEGMDLTHNPEFTTCE 287

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVA--------NQKIFSFQNVNCNPFSEPEYITVAEA 173
           +Y A+  Y  LM     ++    +          +   +    V  +       I + + 
Sbjct: 288 FYSAYSDYHDLMTMTEELLSGLVKKITGGYTVSYHSDGYDSPPVEIDFTPPFRRIEMVKG 347

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                 I+L   L + +      L    +  G+  A   T S +  +++   +E      
Sbjct: 348 LEDTMGIELPKDLASEEAN--EFLKKTCEARGVYCAPPLTTSRLLDKLVGHYLEETCV-- 403

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  +P   S LA  + + P  T+RFEL+    EL NA  EL +P+EQR RF ++++
Sbjct: 404 NPAFIIDHPLIMSPLAKQHRSKPGLTERFELFVNKHELVNAYTELNNPVEQRDRFVQQLK 463

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           +++   +E   +DEDF+  +   +P  +G  MG DRLVML+T + NI EV+  P  +  +
Sbjct: 464 DRQGGDDEAMVLDEDFVKAMEYGLPPCAGWGMGIDRLVMLLTDSLNIKEVLLCPAMKPPE 523


>gi|118465579|ref|YP_879834.1| lysyl-tRNA synthetase [Mycobacterium avium 104]
 gi|254773510|ref|ZP_05215026.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118166866|gb|ABK67763.1| lysyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 499

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 81/365 (22%), Positives = 145/365 (39%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               +R  +  ++R       F+E+++  
Sbjct: 144 LRPLPVAHKEMSEEARVRQRYVDLIVRPQARTVARQRIAVIRAIRNALERRGFLEVETPM 203

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +K+F     +RN  
Sbjct: 204 LQTLAGGAA-ARPFVTHS---NALDIDLYLRIAPELFLKRCVVGGFDKVFELNRVFRNEG 259

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF+MLE Y+A+ +Y+        +I+        +    + +     S  +  
Sbjct: 260 ADSTHSPEFSMLETYQAYGTYDDSAVVTRELIQE----VADEAIGTRQLPLPDGSVYDID 315

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKI 226
               +   Y ++      +   Q     L   A++ G+ +  D       I   +    +
Sbjct: 316 GEWASIEMYPSLSAALGEEITPQTTVEKLLGIAERLGVEIPRDRGYGHGKIVEELWEHTV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +P   + L   + +    T++++LY   +EL     EL DP+ QR 
Sbjct: 376 GDT--LTAPTFVRDFPVETTPLTRQHRSIDGVTEKWDLYVRGVELATGYSELTDPVVQRE 433

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +      +E   +DEDFLA L   MP  +G  MG DRL+M +TG  +I E +  
Sbjct: 434 RFAAQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMTLTGL-SIRETVLF 492

Query: 346 PFSQS 350
           P  + 
Sbjct: 493 PIVRP 497


>gi|15836464|ref|NP_300988.1| lysyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|8979305|dbj|BAA99139.1| lysyl tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 527

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 92/372 (24%), Positives = 165/372 (44%), Gaps = 33/372 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              +KR+ I   +R Y   + F+E+++ 
Sbjct: 158 LLSLPDKHAGLSDKEVRYRKRWLDLISSREVSDTFVKRSYIIKLIRNYMDAHGFLEVETP 217

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     + F+T +   + +    +L+ S E + KK+L  G  +I+     +RN 
Sbjct: 218 ILQNIYGGA-EAKPFTTTM---EALHSETFLRISLEIALKKILVGGAPRIYELGKVFRNE 273

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-------IFSFQNVNCN 160
                H PEFTM+E Y A+  Y+++M    N++       N          +       +
Sbjct: 274 GIDRTHNPEFTMIEAYAAYMDYKEVMVFVENLVEHLVRAVNHDNTSLVYSYWKHGPQEVD 333

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +    +T+ E+ A YA ID+    D   +          + A    +     + +F  
Sbjct: 334 FKAPWIRMTMKESIATYAGIDVDVHSDQKLKEILKKKTTFPETAFATASRGMLIAALFDE 393

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELL 279
           ++ +       +     +  +P   + L     + D  F +RFE +    ELCNA  EL 
Sbjct: 394 LVSD------NLIAPHHITDHPVETTPLCKTLRSGDTAFVERFESFCLGKELCNAYSELN 447

Query: 280 DPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
           DPI QR   E++  +K+ +  +E +PIDE+FL  L   MP + G  +G DRLVM++T A 
Sbjct: 448 DPIRQRELLEQQHTKKELLPDSECHPIDEEFLEALCQGMPPAGGFGIGVDRLVMILTNAA 507

Query: 338 NINEVIWTPFSQ 349
           +I +V++ P  +
Sbjct: 508 SIRDVLYFPVMR 519


>gi|253743723|gb|EET00046.1| Lysyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 576

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 86/380 (22%), Positives = 155/380 (40%), Gaps = 40/380 (10%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF----------LLKRNMIQSSLREYF-VENQFIEIDSM 47
           +H IP+ P    D    +R+R            +++R+ I + +R +   + +++E+++ 
Sbjct: 200 LHMIPNSPTALTDLNTRFRQRYLDFIINNTGQKIVQRSGIINFIRRFMIDQRKYLEVETP 259

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     + F       + +   +YL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 260 MLQTIHGGAA-AQPFV---CKSNDLGHDVYLRIAPELFLKRLVVGGLNRVFEINKNFRNE 315

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI---------------- 151
                H PEFTM+E Y A++  E +     +++       N                   
Sbjct: 316 SSDQTHSPEFTMMEAYSAYDDLEDMCDLIEDLVSKLVRWYNITYNKVRLPDEKKHYKLTF 375

Query: 152 --FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                     +       + + E   +   I     LD  +      L    ++  +   
Sbjct: 376 VSHKGDTYEIDFSRPWRRVPIIETLEKMLEIKFPRPLDGEECN--AFLINLLERLNLECK 433

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
              T + +  +++   +E          L  +P   S LA  + + P   +RFE++    
Sbjct: 434 PPLTTARMLDKLVENYLE--TLTPNPIFLMYHPVLMSPLAKPHRSIPELAERFEVFISCF 491

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDR 328
           E+ NA  EL +PI QR  F+ ++++K     E    DEDF  CL   +P + GI +G DR
Sbjct: 492 EISNAYTELNNPIVQRENFQAQVRDKAAGDVEAMEYDEDFCKCLDYGLPPTGGIGVGIDR 551

Query: 329 LVMLVTGANNINEVIWTPFS 348
           LVML+T ++ I EVI  P  
Sbjct: 552 LVMLLTNSSTIREVIAFPLM 571


>gi|302821721|ref|XP_002992522.1| hypothetical protein SELMODRAFT_186810 [Selaginella moellendorffii]
 gi|302821723|ref|XP_002992523.1| hypothetical protein SELMODRAFT_186810 [Selaginella moellendorffii]
 gi|300139724|gb|EFJ06460.1| hypothetical protein SELMODRAFT_186810 [Selaginella moellendorffii]
 gi|300139725|gb|EFJ06461.1| hypothetical protein SELMODRAFT_186810 [Selaginella moellendorffii]
          Length = 536

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 88/360 (24%), Positives = 149/360 (41%), Gaps = 28/360 (7%)

Query: 13  DFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
           +  YR R             L   +   + +R +  +  F E+++  L    G     R 
Sbjct: 172 ETRYRLRFLDIIVNPEVKFVLETAHSAVNYIRSFLDQRGFREVETAILNSKAGGAA-ARP 230

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F+T     D     + L+ +PE   K+LL AG   ++     +RN      H PEFT  E
Sbjct: 231 FNTH---HDASEMDMSLRIAPELQLKQLLVAGYNGVYEVDKQFRNEGMDLTHNPEFTTCE 287

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYITVAEA 173
           +Y A+  Y  LM     ++    +          +        V  +       I +   
Sbjct: 288 FYSAYSDYHDLMTMTEELLSGLVKKITGGYTVSYHSNGYDSPPVEIDFTPPFRRIEMVNG 347

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                 I+L   L + +      L    +  G+  A   T S +  +++   +E      
Sbjct: 348 LEDTMGIELPKDLASEEAN--EFLKKTCEARGVYCAPPLTTSRLLDKLVGHYLEETCV-- 403

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  +P   S LA  + + P  T+RFEL+    EL NA  EL +P+EQR RF ++++
Sbjct: 404 NPAFIIDHPLIMSPLAKQHRSKPGLTERFELFVNKHELVNAYTELNNPVEQRDRFVQQLK 463

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           +++   +E   +DEDF+  +   +P  +G  MG DRLVML+T + NI EV+  P  +  +
Sbjct: 464 DRQGGDDEAMVLDEDFVKAMEYGLPPCAGWGMGIDRLVMLLTDSLNIKEVLLCPAMKPPE 523


>gi|149180413|ref|ZP_01858918.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148852605|gb|EDL66750.1| lysyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 477

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 155/364 (42%), Gaps = 23/364 (6%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R             +L R+ +  S+R +F +  FIE+++ 
Sbjct: 120 LRPLPEKWHGISNIELRYRQRYLDMLMTEETQNRVLARSQMVRSIRRFFEDQDFIEVETP 179

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ++       + F T     + +   L L+ +PE   K+L+  G  KIF  A  +RN 
Sbjct: 180 VLQHTSSGA-LAKPFKT---YHNALDTELNLRIAPETYLKRLIVGGYTKIFEVAKCFRNE 235

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H  EFTM+E Y A  +YE  M+    +I    +   N    + +  + +  +E +
Sbjct: 236 GVSPQHLQEFTMVEGYAAFWNYEDTMRLMRKMILSVLQNTFNTTTITLKGQSIDFTAEWD 295

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I+  E   +   ID+       D            +   + A      +    +  +  
Sbjct: 296 VISFRELILKNTGIDIDLFPKVKDLLQETKRRKI--ELDYQEADSMGRGNFIDFLYKKTC 353

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                I   T L ++P   S LA     DP  T RF+L     E+ NA  EL+DP+EQR 
Sbjct: 354 --RRLIVKPTFLIQHPIDLSPLARANDEDPSLTDRFQLVVNGAEIINAYSELVDPLEQRK 411

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R E +   K     E   +DED+L  +   MP  SG   G +RL+M++T + +I + ++ 
Sbjct: 412 RLEVQALLKSNGDAEAMEMDEDYLKAMEYGMPPISGWGFGVERLLMILTDSESIKDCVFF 471

Query: 346 PFSQ 349
           P ++
Sbjct: 472 PLTK 475


>gi|321309588|ref|YP_004191917.1| lysyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801432|emb|CBY92078.1| lysyl-tRNA synthetase (class II) [Mycoplasma haemofelis str.
           Langford 1]
          Length = 480

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 82/364 (22%), Positives = 157/364 (43%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           ++  PSQ +   +++   R R                R  I   +R +  +  ++E ++ 
Sbjct: 127 LNPFPSQYYGIKDKEIQLRNRVVHCLVDQDVFNTFKFRAKIIRYIRNFLDDRGYLEFETP 186

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L+ + G   +   F T       ++   +L+ + E S KK++ +G  K++     +RN 
Sbjct: 187 ILESNYGGA-NAVPFRTHYK---ALKSDFFLRIATEISLKKIIISGFSKVYEIGRVFRNE 242

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y  +   +++M    ++ +  +        S+   N +       
Sbjct: 243 GIDSTHNPEFTSIEIYTVNHGLDEVMDLTESLFKHVSRELQVDSVSWNESNISFKEPFRR 302

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKI 226
           +++++      ++D        D          AQ+  + V  H +T   IF  +  E +
Sbjct: 303 VSISDLLKEKISVDF-----YNDDISLERALKLAQEYDVHVEKHQETVGHIFHLLFEELV 357

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +    S L+   P +P FT R+ELY    E  N   EL DP +Q  
Sbjct: 358 EK--DLVDPTFVTGFHKDVSPLSKADPQNPNFTLRYELYIGGKEFSNGFAELNDPDDQLE 415

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+K+++E+     E + +D +++  +   +P + GI +G DRLVML T   +I +VI+ 
Sbjct: 416 RFKKQVEERDLGNEEAFDVDYEYIEAMKYGLPPTGGIGIGIDRLVMLFTEKKSIKDVIFF 475

Query: 346 PFSQ 349
           P  +
Sbjct: 476 PQLK 479


>gi|229579931|ref|YP_002838330.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228010646|gb|ACP46408.1| lysyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
          Length = 492

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 81/331 (24%), Positives = 148/331 (44%), Gaps = 14/331 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R  +  R MI   +RE+     FIE+++  +Q   G     + F T +   +++ +  YL
Sbjct: 164 RKAMEIRYMIIREIREFLYSKGFIEVETPIVQPVYGGA-LAKPFKTHV---NYLNEDWYL 219

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + + E   K+ +  G  K+F     +RN +    H PEFT+LE Y A+  Y  +M    +
Sbjct: 220 RIALELYLKRYIIGGFNKVFEIGKVFRNEDIDVTHNPEFTLLELYWAYADYNDIMNLTED 279

Query: 139 IIR-CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++     V N    ++     +  +  + I++ ++ +           +  +  D  L 
Sbjct: 280 LLKSVIKRVTNSTKVAYGKYEIDFEAPFKRISMYDSLSEILG------KNVENMSDDELK 333

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
            L  +   I   +      +  ++  + + P   +   T +  YP   + L   +     
Sbjct: 334 ELMKKYNLIPRGNQYVRGLMIEKLFDKLVTPT--LTNPTFITDYPIETTPLCKPHRNKLG 391

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
             +RFE++   +E+ NA  EL DPI Q   F +E +  ++   E +P D+DF+  L   M
Sbjct: 392 LVERFEMFIAGMEIANAYTELNDPILQDKLFREEQEMFRRGDEEAHPYDKDFVRALSYGM 451

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           P + G+ +G DR+VMLVT   +I EVI  P 
Sbjct: 452 PPTGGLGIGIDRIVMLVTNNYSIKEVIPFPM 482


>gi|256826236|ref|YP_003150196.1| lysyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256689629|gb|ACV07431.1| lysyl-tRNA synthetase (class II) [Kytococcus sedentarius DSM 20547]
          Length = 520

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 89/364 (24%), Positives = 142/364 (39%), Gaps = 20/364 (5%)

Query: 1   MHQIPSQPWWN-RDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       +   R+R             +L R++I S++R +  E  ++EI++  
Sbjct: 163 LRPLPTLHKDLSEEQRVRQRYADLIVRDEARRMVLTRSLITSTVRRFLEERGYVEIETPV 222

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T L   +   + + L+ + E + KK +  G EK+F     +RN  
Sbjct: 223 LQLIHGGA-LARPFTTHL---NAFNQDMTLRIALELNLKKAVVGGVEKVFEIGRIFRNEG 278

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTMLE Y A      + +    +    A+   +       V   P  E +  
Sbjct: 279 VDSTHSPEFTMLEAYEAWGDQTTMAELMQEMYLVVADALIEAGLLESRVLSTPAGEIDLD 338

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                   Y  +          + D   L   A +  + +        I   +L E +EP
Sbjct: 339 GEWRWLPVYEGVSEAVGASVTPETDEATLRELAARHEVELDPAWGAEKIVLELLSELVEP 398

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T L  YP     LA  + + P   + ++L    +E   A  EL+DPI QR   
Sbjct: 399 T--LVQPTFLCDYPPSAQPLARPHRSKPGLIEAWDLIIGGVERSTAFSELIDPIVQREVL 456

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++         E   +DEDFL  L    P   G+  G DR+VML TG   I E I  P 
Sbjct: 457 TEQSLAAAAGDPEAMQLDEDFLRALEYGAPPMGGMGFGLDRMVMLFTGVG-IRETILFPH 515

Query: 348 SQSN 351
           ++  
Sbjct: 516 TKPE 519


>gi|311030950|ref|ZP_07709040.1| lysyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 485

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 160/368 (43%), Gaps = 31/368 (8%)

Query: 1   MHQIPSQPWWNR--DFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +       D  YR+R             +L R  +  ++R +  E  F+E+++ 
Sbjct: 129 LHTLPDKWHGLTNTDTRYRQRYIDLMMTKETQNRMLMRTKLVRAVRRFLEEKDFLEVETP 188

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ++       R F T     + +   L L+ +PE   K+L+  G  K+F FA  +RN 
Sbjct: 189 VLQHTSSGA-LARPFKT---YHNSLDMELNLRIAPETYLKRLIVGGFTKVFEFAKCFRNE 244

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H  EFTM+E Y A  +YE  M+    +I     +  +  + S Q  + +   E  
Sbjct: 245 GISPQHLQEFTMVEGYAAFWNYEDTMQLMREMIVYVLKQTFDSTVISIQGQSIDFSLEWN 304

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT----WSDIFSRIL 222
            ++  E   +   ID+         PD   L+ + ++  I +  +D       +    + 
Sbjct: 305 VVSFRELILKDTGIDID------LYPDVKTLHEETKRRNIYLEGEDIQTLGRGNFIDLLY 358

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
            +   P+  +   T L  +P   S LA     +P  T RF+L     E+ NA  EL+DP+
Sbjct: 359 KKMCRPH--LIEPTFLVNHPIDLSPLARANDDNPSITDRFQLVVNGAEIINAYSELVDPV 416

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           EQR R E +   K     E   +DED+L  +   MP  SG   G +RL+M++T  + I +
Sbjct: 417 EQRKRLETQALLKSGGDTEAMEMDEDYLLAMEHGMPPISGWGFGIERLLMVLTDCDTIKD 476

Query: 342 VIWTPFSQ 349
            +  P ++
Sbjct: 477 CVLFPLTK 484


>gi|325067937|ref|ZP_08126610.1| lysyl-tRNA synthetase [Actinomyces oris K20]
          Length = 557

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 91/370 (24%), Positives = 152/370 (41%), Gaps = 29/370 (7%)

Query: 1   MHQIPSQPWWNR---------DFHYRRRP-----------FLLKRNMIQSSLREYFVENQ 40
           +  +P + W N          +   RRR             +  R  +  S+RE F    
Sbjct: 194 LRPLP-KTWTNEAGEAVTLSEEQRVRRRELDLLTRPAARDMVRTRAAVVRSIRENFFRRD 252

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           ++E+++  LQ   G     R F T +   +     LYL+ + E   K+ +  G +++F  
Sbjct: 253 YLELETPMLQVIHGGAA-ARPFITHM---NAFDMDLYLRIATEIYLKRAVVGGVDRVFEI 308

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT LE Y A+  Y+ + +   N+++ AA  A       + V   
Sbjct: 309 NRNFRNEGADSSHSPEFTALEAYEAYSDYDGMAELTRNLVQQAARDAFDLPEGGEVVTLA 368

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +E +     +    Y ++      +   +  R  L   A++ G+ +        +   
Sbjct: 369 DGTEYDLSGEWDKIDLYTSVSEALGEEITVETPREQLVAHAEKIGLEIDDYAVAGKVVED 428

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           I  E +     +   T +  +P   S L   + + P  T++++LY    E   A  EL D
Sbjct: 429 IFEELVGNK--LWAPTFVYDFPEDTSPLTRYHRSKPGLTEKWDLYVRGFETATAYSELAD 486

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P+ QR RFE +     K   E   +DEDFL  +    P S G+ MG DRL+M++TG   I
Sbjct: 487 PVVQRERFEAQALAAAKGDPEAMILDEDFLVAMEQGFPPSGGMGMGIDRLLMVLTGQG-I 545

Query: 340 NEVIWTPFSQ 349
            E I  P  +
Sbjct: 546 RETITFPLVK 555


>gi|322493405|emb|CBZ28691.1| putative lysyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 536

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 90/361 (24%), Positives = 155/361 (42%), Gaps = 25/361 (6%)

Query: 8   PWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNE 56
           P  +    YR R               KR+ I  +LR++     F+E+++  L       
Sbjct: 87  PLTDTGIKYRYRFVDMMSNPSVVQHFRKRHAITRALRDFLDARSFVEVETPVLHSVASGA 146

Query: 57  THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            + + F T     +     L+L+ +PE   K+ +  G E+++     +RN +    H PE
Sbjct: 147 -NAKPFVTH---HNANDADLFLRVAPELHLKQCVVGGMERVYEIGRVFRNEDADRSHNPE 202

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-------IFSFQNVNCNPFSEPEYIT 169
           FT  E+Y A+ +YE LM     I+R  A  AN           + + V  +       + 
Sbjct: 203 FTTCEFYAAYHTYEDLMTMTEEILRHLALAANGTTKITVTSCVAKEPVEIDLAQPFRRVN 262

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A    A ++L    +         +     +  I +    T + +F +++   I   
Sbjct: 263 AYDAVQEAAGVELPPPTELSTPRGLAYMSAIMLRYNIPLPSVRTAAKMFDKLIDYFI--T 320

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   T +  +P   S LA    A P  + RFEL+    E CNA  EL DP EQ +RF+
Sbjct: 321 DRVVEPTFVTDHPLFMSPLAMEQRARPGLSARFELFINGTEYCNAYSELNDPQEQYYRFQ 380

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +++ +++   +E   +DE FL  L   +P ++G  MG DR+ ML+ G++ I E I  P  
Sbjct: 381 QQLLDRQTGDDEAMALDETFLKALQVGLPPTAGWGMGIDRVAMLLNGSSTIREDILFPLL 440

Query: 349 Q 349
           +
Sbjct: 441 R 441


>gi|329948250|ref|ZP_08295094.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328522774|gb|EGF49882.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 556

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 153/370 (41%), Gaps = 29/370 (7%)

Query: 1   MHQIPSQPWWNR---------DFHYRRRP-----------FLLKRNMIQSSLREYFVENQ 40
           +  +P + W N          +   RRR             +  R  +  S+RE F    
Sbjct: 193 LRPLP-KTWTNEAGEAVTLSEEQRVRRRELDLLTRPAARDMVRTRAAVVRSIRENFFRRD 251

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           ++E+++  LQ   G     R F T +   +     LYL+ + E   K+ +  G +++F  
Sbjct: 252 YLELETPMLQVVHGGAA-ARPFITHM---NAFDMDLYLRIATEIYLKRAVVGGVDRVFEI 307

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT LE Y A+  Y+ + +   N+++ AA  A       + V  +
Sbjct: 308 NRNFRNEGADSSHSPEFTALEAYEAYSDYDGMAELTRNLVQQAARDAFDLPEGGEVVTLS 367

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +E +     +    Y ++      +   +  R  L   A++ G+ V        +   
Sbjct: 368 DGTEYDLSGQWDTIDLYTSVSEALGEEITVETPREQLVAHAERIGLEVDDYAVAGKVVED 427

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           I  E +     +   T +  +P   S L   + + P  T++++LY    E   A  EL D
Sbjct: 428 IFEELVGNK--LWAPTFVYDFPEDTSPLTRYHRSKPGLTEKWDLYVRGFETATAYSELAD 485

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P+ QR RFE +     K   E   +DEDFL  +    P S G+ MG DRL+M++TG   I
Sbjct: 486 PVVQRERFEAQALAAAKGDPEAMVLDEDFLVAMEQGFPPSGGMGMGIDRLLMVLTGQG-I 544

Query: 340 NEVIWTPFSQ 349
            E I  P  +
Sbjct: 545 RETITFPLVK 554


>gi|294790611|ref|ZP_06755769.1| lysine--tRNA ligase [Scardovia inopinata F0304]
 gi|294458508|gb|EFG26861.1| lysine--tRNA ligase [Scardovia inopinata F0304]
          Length = 542

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 87/364 (23%), Positives = 149/364 (40%), Gaps = 23/364 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P+       +   R+           R  +  R  + SSLR  F E  ++E ++  
Sbjct: 184 LQPLPALHKELSEEQRTRKPYLGMIVDSKARDMVRNRAKVVSSLRRNFDERGYLEAETPM 243

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ + G  T  R F T +   +     L+++ +PE   K+LL  G +K+F     +RN  
Sbjct: 244 LQTNHGGAT-ARPFETHM---NAFDINLFMRIAPELFLKRLLVGGIDKVFEINRDFRNEG 299

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTM+E Y A+ +Y+ + +   ++++ AA  A         +     +     
Sbjct: 300 ADGTHAPEFTMVEAYEAYGTYDTMAELTRSLVQQAALDAFGTT----ELTLADGTPYNVG 355

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI-E 227
               +   Y ++      +   +     L   A + G+     +    +   +      E
Sbjct: 356 GEWTSITMYGSLSEKLGEEITPETSVDYLASLADKLGVERDEVENHGKLVEHLWEHFYTE 415

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S L   + +     ++++LY    EL  A  EL DP+ QR R
Sbjct: 416 DPHTLWEPTFVRDFPVETSPLTKSHRSVAGQVEKWDLYVRGFELATAYSELNDPVVQRQR 475

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  + +       E   IDEDFL  L   MP + G+ MG DRL++ +TGA  I E I  P
Sbjct: 476 FVDQARMALAGDAEAMDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGA-TIRETITFP 534

Query: 347 FSQS 350
             + 
Sbjct: 535 LVKP 538


>gi|320533484|ref|ZP_08034159.1| lysyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320134309|gb|EFW26582.1| lysyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 566

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 91/370 (24%), Positives = 152/370 (41%), Gaps = 29/370 (7%)

Query: 1   MHQIPSQPWWNR---------DFHYRRRP-----------FLLKRNMIQSSLREYFVENQ 40
           +  +P + W N          +   RRR             +  R  +  S+RE F    
Sbjct: 203 LRPLP-KTWTNEAGEAVTLSEEQRVRRRELDLLTRPAARDMVRTRAAVVRSIRENFFRRD 261

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           ++E+++  LQ   G     R F T +   +     LYL+ + E   K+ +  G +++F  
Sbjct: 262 YLELETPMLQVIHGGAA-ARPFITHM---NAFDMDLYLRIATEIYLKRAVVGGVDRVFEI 317

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT LE Y A+  Y+ + +   N+++ AA  A       + V   
Sbjct: 318 NRNFRNEGADSSHSPEFTALEAYEAYSDYDGMAELTRNLVQQAARDAFDLPEGGEVVTLA 377

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +E +     +    Y ++      +   +  R  L   A++ G+ +        +   
Sbjct: 378 DGTEYDLSGQWDKIDLYTSVSEALGEEITVETPRERLVAHAERIGLEIDDYAVAGKVVED 437

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           I  E +     +   T +  +P   S L   + + P  T++++LY    E   A  EL D
Sbjct: 438 IFEELVGNK--LWAPTFVYDFPEDTSPLTRYHRSKPGLTEKWDLYVRGFETATAYSELAD 495

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P+ QR RFE +     K   E   +DEDFL  +    P S G+ MG DRL+M++TG   I
Sbjct: 496 PVVQRERFEAQALAAAKGDPEAMILDEDFLVAMEQGFPPSGGMGMGIDRLLMVLTGQG-I 554

Query: 340 NEVIWTPFSQ 349
            E I  P  +
Sbjct: 555 RETITFPLVK 564


>gi|257068467|ref|YP_003154722.1| lysyl-tRNA synthetase (class II) [Brachybacterium faecium DSM 4810]
 gi|256559285|gb|ACU85132.1| lysyl-tRNA synthetase (class II) [Brachybacterium faecium DSM 4810]
          Length = 502

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 83/340 (24%), Positives = 142/340 (41%), Gaps = 13/340 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
                R  + +R  +  SLR  F + +++EI++  LQ  P      R F T +       
Sbjct: 173 VRQEARDTVRQRAEVMHSLRTSFHDREYVEIETPMLQVIPSGAA-ARPFVTHMH---AFD 228

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
             LYL+ +PE   K+    G EK+F     +RN      H PEF MLE Y+A+  Y  + 
Sbjct: 229 LDLYLRIAPELYLKRAAVGGLEKVFEINRNFRNEGADSTHSPEFAMLEAYQAYGDYNTIG 288

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
                +++ AAE A               SE ++         Y ++      +   +  
Sbjct: 289 DLTRTLVQEAAERATGSQLV----TLADGSEYDFSGEWAQITVYGSLSESLGEEITPETS 344

Query: 194 RHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
              L   A    + + H       +   +   ++  +  ++  T +  +P   S L   +
Sbjct: 345 PEQLRRIASSLDLDLDHPKYGHGKLVEELFEHQVGDH--LHEPTFVRDFPVETSPLVREH 402

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
            + P   ++++LY    EL     EL+DP+ QR RF ++ +   +  +E   +DEDFL  
Sbjct: 403 RSTPGVVEKWDLYVRGFELGTGYSELVDPVIQRERFAQQAELAAQGDDEAMRLDEDFLEA 462

Query: 313 LTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           +   +P + G+ MG DRL+M +TG   I E I  P  +  
Sbjct: 463 MEHALPPTGGMGMGVDRLLMALTGLG-IRETILFPLVKPE 501


>gi|154507904|ref|ZP_02043546.1| hypothetical protein ACTODO_00389 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797538|gb|EDN79958.1| hypothetical protein ACTODO_00389 [Actinomyces odontolyticus ATCC
           17982]
          Length = 539

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 148/369 (40%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--------NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQF 41
           +  +P             + D   RRR             +  R  +  S+RE F    +
Sbjct: 175 IRPLPKTWTTEDGEEITLSEDQRIRRRELDLITRPAARDMVRIRAAVNRSIRENFFRRDY 234

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           IE+++  LQ   G     R F+T +   + +   LYL+ + E   K+ +  G +++F   
Sbjct: 235 IELETPMLQMIHGGAA-ARPFTTHM---NALDTDLYLRIATEIYLKRAVVGGVDRVFEMN 290

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +RN      H PEFT LE Y A+  Y  + +   ++I+ AA  A       + V    
Sbjct: 291 RNFRNEGMDSSHSPEFTSLEAYEAYSDYNGMAELTRDLIQQAARDAFDLSEGEEIVRLAD 350

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +E +     +    Y +       +   +  R  L   A++ G+ V        I   I
Sbjct: 351 GTEYDLSGEWDRIDLYGSTSEALGEEVTVETPRETLVKYAERIGLEVDDYAVSGKIVEDI 410

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E +     +   T +  +P   S L   + + P  T++++LY    E   A  EL DP
Sbjct: 411 FEELVASK--LWAPTFVYDFPEDTSPLTRYHRSRPGLTEKWDLYVRGFETGTAYSELADP 468

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           + QR RFE +         E   +DEDFL  +    P   G+ MG DRL+M++TG   I 
Sbjct: 469 VVQRERFEAQALAAANGDPEAMVMDEDFLIAMEQGFPPCGGMGMGIDRLLMVLTGQG-IR 527

Query: 341 EVIWTPFSQ 349
           E I  P  +
Sbjct: 528 ETIPFPLVK 536


>gi|169627648|ref|YP_001701297.1| lysyl-tRNA synthetase (LysS) [Mycobacterium abscessus ATCC 19977]
 gi|169239615|emb|CAM60643.1| lysyl-trna synthetase (LysS) [Mycobacterium abscessus]
          Length = 500

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 84/365 (23%), Positives = 143/365 (39%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               +R  +  ++R+      F+E+++  
Sbjct: 145 LRPLPVAHKEMSEETRVRQRYVDLIVRPEARQIARQRVAVMRAIRDAMHRRDFLELETPI 204

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   KK L  G +KIF     +RN  
Sbjct: 205 LQTLAGGAA-ARPFITHS---NALDIDLYLRIAPELFLKKALVGGFDKIFELNRVFRNEG 260

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y  + +Y+        +I+  A+ A                + E+ 
Sbjct: 261 ADSTHSPEFVMLETYETYGTYDTAATMIRELIQEVADDAMGTRQVTLPDGSTYDLDGEWT 320

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKI 226
           T+      Y ++      +         L+  A + G  +  D       +   +   ++
Sbjct: 321 TL----EMYPSLSEALGEEITPDTPVAELWKIADRVGAEIPTDRGYGHGKLIEELWEHQV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
              +     T +  +P   S L   + +    T++++LY    EL     EL+DP+ QR 
Sbjct: 377 GDKMY--APTFVRDFPVETSPLTRQHRSIAGVTEKWDLYVRGFELATGYSELIDPVIQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +      +E   +DEDFL  +   MP ++G  MG DRL+M +TG   I E I  
Sbjct: 435 RFVDQARLAAAGDDEAMSLDEDFLGAMEHAMPPAAGTGMGIDRLLMALTGLG-IRETILF 493

Query: 346 PFSQS 350
           P  + 
Sbjct: 494 PIVRP 498


>gi|327539769|gb|EGF26372.1| lysyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 546

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 149/364 (40%), Gaps = 36/364 (9%)

Query: 5   PSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY 51
           P +     N+D   R R              L R  I  S+R    +  F E++  +L  
Sbjct: 202 PEKHAGMTNQDLRQRMRYADLAFNDGVMQTFLDRTKIIKSIRSTLDDQGFCEVEGPTLHT 261

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
            PG     R F T     + +   L ++ + E   K+L+  G E+++     +RN     
Sbjct: 262 VPGGAA-ARPFETH---HNALDMQLTMRIALELHLKRLMVGGMERVYELGRVYRNEGLSP 317

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPEYITV 170
            H PEFTMLE Y+A+ +YE +M     II  A E         +     +     +  T 
Sbjct: 318 RHNPEFTMLETYQAYGNYESMMDLTEKIICDAIEKIGGGFKREYNGTMLDFTPPFQRATY 377

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
           AE F +   ID           D   +   A+   + +        I + I  EK+E + 
Sbjct: 378 AELFQKATGIDP---------ADEDAVKEYAKGLKLTI-EGKHPDVIRNEIFEEKVEDS- 426

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
            +     +  YPA    L      +P   +RFE++ C +EL NA  EL DP  Q   F+ 
Sbjct: 427 -LQGPIFVTDYPASICPLTKRKKDNPEIAERFEMFICGMELANAYTELNDPDLQEELFKT 485

Query: 291 EMQEKKKIYNE--TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++   +   +E     +D DF+  L   MP + G+ +G DRLVM++T   +I +VI  P 
Sbjct: 486 QL---EGQDDEDSMAKMDHDFVRALRYGMPPAGGLGIGIDRLVMVLTNQKSIRDVILFPV 542

Query: 348 SQSN 351
            +  
Sbjct: 543 LRPE 546


>gi|293190377|ref|ZP_06608809.1| lysine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292820961|gb|EFF79916.1| lysine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 539

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 148/369 (40%), Gaps = 27/369 (7%)

Query: 1   MHQIPSQPWW--------NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQF 41
           +  +P             + D   RRR             +  R  +  S+RE F    +
Sbjct: 175 IRPLPKTWTTEDGEEITLSEDQRIRRRELDLITRPAARDMVRIRAAVNRSIRENFFRRDY 234

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           IE+++  LQ   G     R F+T +   + +   LYL+ + E   K+ +  G +++F   
Sbjct: 235 IELETPMLQMIHGGAA-ARPFTTHM---NALDTDLYLRIATEIYLKRAVVGGVDRVFEMN 290

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +RN      H PEFT LE Y A+  Y  + +   ++I+ AA  A       + V    
Sbjct: 291 RNFRNEGMDSSHSPEFTSLEAYEAYSDYNGMAELTRDLIQQAARDAFDLSEGEEIVRLAD 350

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +E +     +    Y +       +   +  R  L   A++ G+ V        I   I
Sbjct: 351 GTEYDLSGEWDRIDLYGSTSEALGEEITVETPRETLVKYAERIGLEVDDYAVSGKIVEDI 410

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             E +     +   T +  +P   S L   + + P  T++++LY    E   A  EL DP
Sbjct: 411 FEELVVSK--LWAPTFVYDFPEDTSPLTRYHRSRPGLTEKWDLYVRGFETGTAYSELADP 468

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           + QR RFE +         E   +DEDFL  +    P   G+ MG DRL+M++TG   I 
Sbjct: 469 VVQRERFEAQALAAANGDPEAMVMDEDFLIAMEQGFPPCGGMGMGIDRLLMVLTGQG-IR 527

Query: 341 EVIWTPFSQ 349
           E I  P  +
Sbjct: 528 ETIPFPLVK 536


>gi|288957802|ref|YP_003448143.1| lysyl-tRNA synthetase, class II [Azospirillum sp. B510]
 gi|288910110|dbj|BAI71599.1| lysyl-tRNA synthetase, class II [Azospirillum sp. B510]
          Length = 370

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 218/342 (63%), Gaps = 2/342 (0%)

Query: 8   PWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI 67
           P W+ +   RRRPFL  R  + +++R  F E  FIE+D+ +LQ SPG E H++AF+TEL 
Sbjct: 26  PPWHPEALARRRPFLAARGRVLTAVRRVFEELAFIEVDTPALQVSPGMEPHLQAFATELR 85

Query: 68  -IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                 R+ LYL TSPEF+ KKLL AG  +++   HA+RNGE+   H PEF+MLEWYRA 
Sbjct: 86  GPHPDDRRTLYLHTSPEFAMKKLLVAGVPRLWQLTHAYRNGERSGTHAPEFSMLEWYRAG 145

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
           + Y  L+ DC +++R  AE   ++ F F+ +NC+PF+    +TV +AF  YA IDL  T 
Sbjct: 146 DGYRTLIDDCRDLLRAGAEAGGRRRFEFRGMNCDPFAAWRVLTVPDAFHEYAGIDLMATY 205

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           D    PD   L  +A + G+     D W DI  RI+ ++IEP+LG     +L  YP   +
Sbjct: 206 DGGHDPDPAALAAEAARIGVAPHEGDRWEDIVFRIMFDRIEPHLGEGVPCVLTDYPLCMA 265

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           AL+   P DPR  +RFELYAC +EL NA  EL D   QR RFE +M  K+++Y E +P+D
Sbjct: 266 ALSRPKPEDPRLAERFELYACGLELANAFGELTDAAVQRARFEADMALKERLYGERFPVD 325

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           EDFLA L   MPQSSGIA+GFDRL ML +GA +I++V+W P 
Sbjct: 326 EDFLAALEHGMPQSSGIALGFDRLAMLCSGAGSIDQVLWLPV 367


>gi|116515196|ref|YP_802825.1| hypothetical protein BCc_270 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285408|sp|Q057G7|SYK_BUCCC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|116257050|gb|ABJ90732.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 502

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 87/365 (23%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 1   MHQIPSQPWWNR--DFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P + +  +  +  YR+R               KR++I S++R +  + +F+E+++ 
Sbjct: 149 LRSLPDKYFGLKNQEIKYRKRYLDLISNNKIIKIFQKRSLIISNIRSFMKQKKFLEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + + F T     + + + +YL+ +PE   KKL+  G  KIF     +RN 
Sbjct: 209 MLHPIPGGA-NAKPFIT---YHNSLNEKMYLRIAPELYLKKLIIGGFNKIFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMN-IIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y ++ +Y  +M       I    +++   I  +++   N     +
Sbjct: 265 GISTKHNPEFTMMEIYMSYSNYIDIMNLLEELCIFLVKKISKSLIIMYKSKKINFKKPIK 324

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ E+  ++        +D  +  +   +   A    I++  + +  +I + I  +  
Sbjct: 325 KMTMIESILKF-----NKNIDISNFKNIKNIKKTATNLNIKIDSNASLGEITNLIFEKTT 379

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    I   T +  YP   S LA     +  F +RFE +    E+ N   EL DP EQ+ 
Sbjct: 380 EKK--IIQPTFITEYPIEISPLA--KEKNKYFAERFEFFIAGYEIANGFSELNDPEEQKK 435

Query: 287 RFEKEMQEKKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           RF+ ++ +K           D+D++  L   +P +SG+ +G DRL+M++T    I ++I+
Sbjct: 436 RFKLQISKKNYTDKSKNFSYDKDYIIALEHGLPPTSGLGVGIDRLIMILTNQKTIKDIIF 495

Query: 345 TPFSQ 349
            P  +
Sbjct: 496 FPLLK 500


>gi|167644728|ref|YP_001682391.1| lysine--tRNA ligase [Caulobacter sp. K31]
 gi|167347158|gb|ABZ69893.1| Lysine--tRNA ligase [Caulobacter sp. K31]
          Length = 349

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 187/347 (53%), Positives = 236/347 (68%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           M      PWW  + H  RRPFLL RN I+++ R +F    F+E+++ +LQ SPGNE H+ 
Sbjct: 1   MQTASPSPWWRPESHADRRPFLLARNRIKAAFRAWFEARDFLEVETAALQVSPGNEAHLH 60

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           AF T  +     R PLYL TSPEFSCKKLLAAGE +IF F   WRN E+G LH PEFTML
Sbjct: 61  AFETAALTISGERAPLYLHTSPEFSCKKLLAAGERRIFDFGKVWRNRERGALHHPEFTML 120

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           EWYR    Y+ LM DC  ++  AAE A  + F F+  +C+PF+ PE +TVA+AF R+A +
Sbjct: 121 EWYRVDAPYQTLMDDCAALLALAAETAGTREFRFRGRSCDPFAAPERVTVAQAFERHAGV 180

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL  ++D     DR  L   A+ AG+RVA DDTW+D+FSR+++EK+EPNLGI   TIL  
Sbjct: 181 DLLASIDGAGATDRDALAASARAAGVRVAADDTWADVFSRVIVEKVEPNLGIGRATILCE 240

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP  E+ALA   P DPR  +RFELYAC +EL NA  EL D  EQR RFE EM EK ++Y 
Sbjct: 241 YPVAEAALARPKPGDPRVAERFELYACGVELANAFGELTDAGEQRRRFEAEMDEKARVYG 300

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E YP+DEDFLA L  MP +SG A+GFDRLVML  GA+ +++V+WTP 
Sbjct: 301 ERYPLDEDFLAALAIMPNASGSALGFDRLVMLAAGASRVDQVMWTPV 347


>gi|297570864|ref|YP_003696638.1| lysyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931211|gb|ADH92019.1| lysyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 529

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 85/341 (24%), Positives = 146/341 (42%), Gaps = 16/341 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
                R  +  R  +  SLR+ F   +FIE+++  LQ   G     R F+T +   +   
Sbjct: 201 TRQGARDMIRIRAKVMRSLRDTFDAERFIELETPILQVLHGGAA-ARPFTTHI---NAYD 256

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
           + LYL+ + E   K+ +  G E+++     +RN      H PEFT LE Y A+ +Y+ + 
Sbjct: 257 QDLYLRIATELYLKRAVVGGVERVYEIGKNFRNEGADSSHSPEFTALEAYEAYGTYDSMA 316

Query: 134 KDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +   ++++ AA                 +   E + IT+ E+ +     ++        +
Sbjct: 317 RLTRDLVQNAARDVFGSTTVTLADGTEYDLGGEWDTITLYESLSEAVGEEVTV------E 370

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
             R  L   A++ G++V        I   I  E +     +   T +  +P   S L   
Sbjct: 371 TPREHLVKIAEKYGVKVKDYAVAGKIAEDIWEELVGDK--LWAPTFVRDFPEDTSPLTRN 428

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
           +   P  T++++LY   +E   A  EL DP+ QR R   +  +      E   +DEDF+ 
Sbjct: 429 HRTKPGLTEKWDLYIRGVETATAYSELADPVIQRERLTAQSLDAANGDPEAMQLDEDFIE 488

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            +    P + G+ MG DRL+M +TG   I E I  PF +  
Sbjct: 489 AMEQGFPPAGGMGMGIDRLLMALTGLG-IRETITFPFVKPR 528


>gi|86739134|ref|YP_479534.1| lysyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86565996|gb|ABD09805.1| lysyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 483

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 158/369 (42%), Gaps = 28/369 (7%)

Query: 2   HQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +       +  YRRR                R  I   +R    +N F+E+++  
Sbjct: 119 RALPDKWQGLSNVEARYRRRYLDLLVNAESRERFQTRANIIRRIRRLLDDNDFLEVETPI 178

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ +       R F T     + + +  YL+ SPE   K+++    ++++     +RN  
Sbjct: 179 LQEAASGAA-ARPFITR---HNALGEDFYLRISPETYLKRIVVGAYDRVYELGRNFRNEG 234

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEY 167
               H  EFTMLEWY A+  Y   M     +I    + V   +  +++ V  +  ++   
Sbjct: 235 MDSSHLQEFTMLEWYAAYWDYRDNMAFVRELILTVLDDVLGTRAVTYEGVKLDFGADWPE 294

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I       R   IDL    D P       L  +  + G+ V    +++ +   +  + + 
Sbjct: 295 IDYRAEVERRTGIDLTVVRDLPT------LRARVAELGLDVGTSPSYAGLVDLLYKKTVR 348

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P   +     L  +PA    LA     DP     F++    +E+  A  EL+DP EQR R
Sbjct: 349 P--DLVQPCFLVHHPAELVPLARRSDTDPTALDMFQVVVNGVEIVKAYSELVDPAEQRQR 406

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E++   ++   +ET  ++EDF+  +   MP  SG+ +G DR V L+TGA  + +V+  P
Sbjct: 407 LEEQAALREAGDDETMMLEEDFIEAMEYGMPPMSGLGLGIDRFVALLTGAPTLRDVVLFP 466

Query: 347 FSQ-SNQEE 354
             + +++++
Sbjct: 467 TMRGAHKDQ 475


>gi|295691314|ref|YP_003595007.1| tRNA synthetase class II (D K and N) [Caulobacter segnis ATCC
           21756]
 gi|295433217|gb|ADG12389.1| tRNA synthetase class II (D K and N) [Caulobacter segnis ATCC
           21756]
          Length = 348

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 190/345 (55%), Positives = 235/345 (68%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
             PS  WW  D H  RRPFLL RN I  + R +F    F E+++ +LQ SPG E H+ AF
Sbjct: 2   PHPSSTWWRSDVHQDRRPFLLARNRITKAFRAWFEAQGFEEVETAALQVSPGAEAHLHAF 61

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           +TE +       PLYL TSPEF+CKKLLAAGEEKIF     WRN E+G LH PEFTMLEW
Sbjct: 62  ATEALSAGGEASPLYLHTSPEFACKKLLAAGEEKIFSLGKVWRNRERGPLHHPEFTMLEW 121

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YRA   YE LM DC  ++  AAE A  K F F+ + C+PF++PE ++VAEAF R+A +DL
Sbjct: 122 YRAKAPYETLMDDCAALLALAAETAGTKRFDFRGMACDPFAQPERLSVAEAFQRHAGVDL 181

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             ++ +  + DR  L   A+ AG+RVA DDTW+DIFSRI++EK+EP LG    TIL  YP
Sbjct: 182 LASVASDGETDRGALAASARAAGVRVAEDDTWADIFSRIIVEKVEPRLGEGRPTILCEYP 241

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
            PE+ALA    AD R  +RFELYAC +EL NA  EL DP+EQR RF  EM EK ++Y E 
Sbjct: 242 IPEAALARPKAADRRVAERFELYACGVELANAFGELTDPVEQRRRFILEMDEKSRVYGER 301

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +PIDEDFLA L  MP++SG A+GFDRLV+L TGA  I +V+WTP 
Sbjct: 302 HPIDEDFLAALGHMPEASGSALGFDRLVLLATGARRIEDVLWTPV 346


>gi|330833993|ref|YP_004408721.1| lysyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566132|gb|AEB94237.1| lysyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 493

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 83/332 (25%), Positives = 141/332 (42%), Gaps = 9/332 (2%)

Query: 17  RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL 76
           + R  +  R  I   +R +  E  FIE+++  LQ   G     + F + +   +++ +  
Sbjct: 162 KARSAMELRFKIIREIRSFLAEQGFIEVETPILQPVYGGA-LAKPFKSHV---NYLDEDW 217

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           YL+ S E   K+ +  G +K+F     +RN +    H PEFT++E Y A+  Y  +M   
Sbjct: 218 YLRISLELYLKRFIVGGFDKVFEIGKVFRNEDIDVTHNPEFTLMELYWAYADYNDIMDLT 277

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             +    AE       +         +    ++     + Y ++      +     D  L
Sbjct: 278 RRLFSHLAEKVLSS--TKLQYKVGENTVEIDLSNFRKISLYDSLSEALGKNVETISDDEL 335

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
            +L                 +  ++  + + PN  I   T +  YP   + L   + + P
Sbjct: 336 KHLMETNGLTPRGSLYLRGLMIEKLFDKLVTPN--IIQPTFVTDYPIETTPLCKPHRSKP 393

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
              +RFELY   +E  NA  EL DP+ Q   F++E    K+   E +P D+DF+  L   
Sbjct: 394 GLVERFELYIAGVEFANAYTELNDPVLQDKLFKEEQDMMKRGDQEAHPYDKDFINALSYG 453

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           MP + G+ +G DR+VML T   +I EVI  P 
Sbjct: 454 MPPTGGLGIGIDRVVMLFTNNQSIKEVIPFPM 485


>gi|32476672|ref|NP_869666.1| lysyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|32447218|emb|CAD77044.1| lysyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 546

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 149/364 (40%), Gaps = 36/364 (9%)

Query: 5   PSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY 51
           P +     N+D   R R              L R  I  S+R    +  F E++  +L  
Sbjct: 202 PEKHAGMTNQDLRQRMRYADLAFNDGVMQTFLDRTKIIKSIRSTLDDQGFCEVEGPTLHT 261

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
            PG     R F T     + +   L ++ + E   K+L+  G E+++     +RN     
Sbjct: 262 VPGGAA-ARPFETH---HNALDMQLTMRIALELHLKRLMVGGMERVYELGRVYRNEGLSP 317

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPEYITV 170
            H PEFTMLE Y+A+ +YE +M     II  A E         +     +     +  T 
Sbjct: 318 RHNPEFTMLETYQAYGNYESMMDLTEKIICDAIEKIGGGFKREYNGTMLDFTPPFQRATY 377

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
           AE F +   ID           +   +   A+   + +        I + I  EK+E + 
Sbjct: 378 AELFQKATGIDP---------ANEDAVKEYAKGLKLTI-EGKHPDVIRNEIFEEKVEDS- 426

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
            +     +  YPA    L      +P   +RFE++ C +EL NA  EL DP  Q   F+ 
Sbjct: 427 -LQGPIFVTDYPASICPLTKRKKDNPEIAERFEMFICGMELANAYTELNDPDLQEELFKT 485

Query: 291 EMQEKKKIYNE--TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++   +   +E     +D DF+  L   MP + G+ +G DRLVM++T   +I +VI  P 
Sbjct: 486 QL---EGQDDEDSMAKMDHDFVRALRYGMPPAGGLGIGIDRLVMVLTNQKSIRDVILFPV 542

Query: 348 SQSN 351
            +  
Sbjct: 543 LRPE 546


>gi|323138165|ref|ZP_08073238.1| lysyl-tRNA synthetase-related protein GenX [Methylocystis sp. ATCC
           49242]
 gi|322396627|gb|EFX99155.1| lysyl-tRNA synthetase-related protein GenX [Methylocystis sp. ATCC
           49242]
          Length = 347

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 183/342 (53%), Positives = 225/342 (65%), Gaps = 5/342 (1%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW RD +  R+PFL  R  I ++ R +F    F E+++ +LQ S GNETH+ AFSTE
Sbjct: 4   ASPWWARDVYADRKPFLKARGKITAATRHFFASEGFTEVETAALQVSGGNETHLTAFSTE 63

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
           LI Q   R  L+L TSPEF+CKKLLAAGEE+IF  A  +RN E+  LH PEFTMLEWYR 
Sbjct: 64  LIGQGGDRSRLFLHTSPEFACKKLLAAGEERIFTLARVFRNRERSALHHPEFTMLEWYRV 123

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            E   +LM+DC  ++  AA  A     +++   C+PF EPE +T  EAFA +A+IDL   
Sbjct: 124 GEPTLRLMEDCAGLLAAAARAAGATDLAWRGRVCDPFEEPEIVTCCEAFAAHASIDLEAL 183

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           LD     DR  L   A + GIRVA DD+WSD+FS+IL EK+E  LG    TIL  YP  E
Sbjct: 184 LD-----DRDGLARAAARDGIRVAEDDSWSDLFSKILSEKVEGRLGSERPTILTDYPLSE 238

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     DPRF  RFELY C +E+ N   EL DP+EQR RFE +M EK +IY E YPI
Sbjct: 239 AALARPSEDDPRFADRFELYVCGVEVANGFAELTDPVEQRRRFEAQMAEKSRIYREHYPI 298

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DEDFL  L  MPQ+SG+A+GFDRLVML TGA  I  V+WTP 
Sbjct: 299 DEDFLEALALMPQASGVALGFDRLVMLATGAERIEHVLWTPV 340


>gi|260906425|ref|ZP_05914747.1| lysyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 519

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 84/366 (22%), Positives = 150/366 (40%), Gaps = 29/366 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        D   R+R             +L R  + SSLR  F    F+EI++  
Sbjct: 155 LRPLPGLHTELAEDTRVRQRYLDLITREEARKTMLTRAEVMSSLRRTFAGQDFVEIETPM 214

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ+  G     R F T +   +     +YL+ +PE   K+ +  G E +F     +RN  
Sbjct: 215 LQFMHGGAA-ARPFKTHM---NAYDIDMYLRIAPELFLKRAIVGGIENVFEINRNFRNEG 270

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF--QNVNCNPFSEPE 166
               H PEF MLE Y+++  Y  +      +++ AA+ A   +        + +   +  
Sbjct: 271 ADSTHSPEFAMLEAYQSYGDYHSIADLTKTLVQNAAQEATGSLVVKLEDGEDYDFGGDWP 330

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEK 225
            +++ E  +  + +++        +    +L   A    + +     +       +    
Sbjct: 331 VVSMYETLSAESGVEVTP------ETGLDVLDKIAADNNVDLGGVFRSHGKYVEELWEHF 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            +    +   T +  +P   S L   +       ++++LY    EL     EL+DP+ QR
Sbjct: 385 YQDK--LWAPTFVTDFPVDTSPLVREHRTKKGVVEKWDLYVRGFELATGYSELVDPVIQR 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +  +  K   E   +DE+FL  +   MP + G+ MG DRL+M +TG   I E I 
Sbjct: 443 ERFEAQAADAAKGDEEAMGLDEEFLTAMEHGMPPTGGMGMGLDRLLMALTGLG-IRETIL 501

Query: 345 TPFSQS 350
            PF++ 
Sbjct: 502 FPFTKP 507


>gi|311112376|ref|YP_003983598.1| lysine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310943870|gb|ADP40164.1| lysine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 527

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 82/376 (21%), Positives = 144/376 (38%), Gaps = 37/376 (9%)

Query: 1   MHQIPSQPW-WNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   RRR             + KR +I  ++R    ++ +IE+++  
Sbjct: 163 IRPMPVLHKDLNEETRVRRRYLDLMVRPEARDLVKKRALITRTVRRVLEDHGYIELETPV 222

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  T  R F T L   +   +P+ ++ + E   K+ +  G E+++     +RN  
Sbjct: 223 LQLVHGGAT-ARPFRTHL---NAFDQPMTMRIATELPLKRAVVGGIERVYEIGRVFRNEG 278

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT LE Y A+     + +    II   A+         ++   +   E  ++
Sbjct: 279 VDSTHSPEFTTLECYEAYADQYVMAERMQEIIVACAQELGVTAIETEDGTIDLGGEWAWL 338

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V    +    +++              L   A +  + V        +   +  E +EP
Sbjct: 339 SVYPGLSEAVGVEITPDTP------AETLREIAAKHEVEVDPAWDAEKLVIELFGEIVEP 392

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP     LA       R  + ++L    +E   A  EL+DP+ QR R 
Sbjct: 393 T--LLNPTFVYNYPPSAQPLARPNRDGSRTIEAWDLIIGGMERGTAFSELIDPVIQRERL 450

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG------------ 335
            ++  +     +E   +DEDFL  L    P   G+ +G DRL+ML+ G            
Sbjct: 451 TEQSHKAAAGDDEAMELDEDFLRALEHGAPPMGGLGLGVDRLIMLLAGEQDPERPGTVVR 510

Query: 336 ANNINEVIWTPFSQSN 351
              I E I  P  +  
Sbjct: 511 QPGIRETILFPLMKPE 526


>gi|300742480|ref|ZP_07072501.1| lysine--tRNA ligase [Rothia dentocariosa M567]
 gi|300381665|gb|EFJ78227.1| lysine--tRNA ligase [Rothia dentocariosa M567]
          Length = 510

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 82/376 (21%), Positives = 144/376 (38%), Gaps = 37/376 (9%)

Query: 1   MHQIPSQPW-WNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P      N +   RRR             + KR +I  ++R    ++ +IE+++  
Sbjct: 146 IRPMPVLHKDLNEETRVRRRYLDLMVRPEARDLVKKRALITRTVRRVLEDHGYIELETPV 205

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  T  R F T L   +   +P+ ++ + E   K+ +  G E+++     +RN  
Sbjct: 206 LQLVHGGAT-ARPFRTHL---NAFDQPMTMRIATELPLKRAVVGGIERVYEIGRVFRNEG 261

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT LE Y A+     + +    II   A+         ++   +   E  ++
Sbjct: 262 VDSTHSPEFTTLECYEAYADQYVMAERMQEIIVACAQELGVTAIETEDGTIDLGGEWAWL 321

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +V    +    +++              L   A +  + V        +   +  E +EP
Sbjct: 322 SVYPGLSEAVGVEITPDTP------AETLREIAAKHEVEVDPAWDAEKLVIELFGEIVEP 375

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP     LA       R  + ++L    +E   A  EL+DP+ QR R 
Sbjct: 376 T--LLNPTFVYNYPPSAQPLARPNRDGSRTIEAWDLIIGGMERGTAFSELIDPVIQRERL 433

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG------------ 335
            ++  +     +E   +DEDFL  L    P   G+ +G DRL+ML+ G            
Sbjct: 434 TEQSHKAAAGDDEAMELDEDFLRALEHGAPPMGGLGLGVDRLIMLLAGEQDPEHPGTVVR 493

Query: 336 ANNINEVIWTPFSQSN 351
              I E I  P  +  
Sbjct: 494 QPGIRETILFPLMKPE 509


>gi|254823223|ref|ZP_05228224.1| lysyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 498

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 79/365 (21%), Positives = 144/365 (39%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               +R  +  ++R       F+E+++  
Sbjct: 143 LRPLPVAHKEMSEEARVRQRYVDLIVRPQARTVARQRIAVIRAIRNALERRGFLEVETPM 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 203 LQTLAGGAA-ARPFITHS---NALDIDLYLRIAPELFLKRCVVGGFDRVFELNRVFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF+MLE Y+A+ +Y+        +I+        +    + +     S  +  
Sbjct: 259 ADSTHSPEFSMLETYQAYGTYDDSAVVTRELIQE----VADEAIGTRQLPLPDGSVYDID 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKI 226
               +   Y ++      +   +     L   A + G+ +  D       I   +    +
Sbjct: 315 GEWASIEMYPSLSSALGEEITPEATVEKLLGIADRLGVEIPRDRGYGHGKIVEELWEHTV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +P   + L   + +    T++++LY   +EL     EL DP+ QR 
Sbjct: 375 --GNALVAPTFVRDFPVETTPLTRQHRSIAGVTEKWDLYVRGVELATGYSELNDPVVQRE 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF  + +      +E   +DEDFLA L   MP  +G  MG DRL+M +TG  +I E +  
Sbjct: 433 RFAAQARAAAAGDDEAMVLDEDFLAALEYAMPPCTGTGMGIDRLLMTLTGL-SIRETVLF 491

Query: 346 PFSQS 350
           P  + 
Sbjct: 492 PIVRP 496


>gi|159466544|ref|XP_001691469.1| tRNA synthetase, class II [Chlamydomonas reinhardtii]
 gi|158279441|gb|EDP05202.1| tRNA synthetase, class II [Chlamydomonas reinhardtii]
          Length = 551

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 85/361 (23%), Positives = 150/361 (41%), Gaps = 37/361 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R     R+ I S +R    +  F+E+++  L+   G     R F T     + +R+   L
Sbjct: 198 RDTFRARSKIISCIRRQLEDRGFLEVETPVLESVAGGA-DARPFRT---FHNTLRRDFTL 253

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + + E   K+L+  G E++F     +RN      H PEFT +E Y+    +   +     
Sbjct: 254 RIATELHLKRLVVGGFERVFELGRIFRNEGVSSRHNPEFTSVEIYQK-TEWHSTVVPIAE 312

Query: 139 IIRCAAEVANQ--KIFSFQNVNCNPFSEPEYITVAEAFARYA-NIDLGTTLDNPDQPDRH 195
           + RC +  +N   K  S+Q V+ +  +     ++A+     A  +D    +    +    
Sbjct: 313 VHRCPSCPSNHPAKPISYQGVDIDFGAPFRRASMAQLVQEAAPGLDFEALMAAGREAAAA 372

Query: 196 LLYLQAQQAGIRVAHD-------DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                A     +   D        +   + + +     E   G+   T +  +P   S L
Sbjct: 373 GGPEAAAAVLAKAKQDAEAVRSAPSLGHLLNEMFEALAEA--GLMQPTFVTEHPVEISPL 430

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI--- 305
           A  + + P  T+RFEL+    E  NA  EL D +EQR RFE+++    + + E   +   
Sbjct: 431 AKPHRSKPGVTERFELFIYGREHANAFSELTDAVEQRVRFEEQVARHNRAFEERKQVCAG 490

Query: 306 ----------------DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                           D DF+A L   +P + G+ +G DRLVM++T + +I +VI  P  
Sbjct: 491 EGSDAEEAEEDYEVAVDYDFIAALEHGLPPTGGLGIGVDRLVMMLTDSPSIRDVIAFPLM 550

Query: 349 Q 349
           +
Sbjct: 551 K 551


>gi|311743345|ref|ZP_07717152.1| lysine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313413|gb|EFQ83323.1| lysine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 502

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 80/364 (21%), Positives = 144/364 (39%), Gaps = 25/364 (6%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P++     D                 R  +  +  +  SLR       ++E+++  
Sbjct: 151 LRPLPNEHTPLSDEARSRLRYVDLIVRPEARENVRVKAAVMKSLRSTLDRLGYVEVETPV 210

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ++ G     R F T +   +   +P  L+ + E   K+ L  G +K++  A  +RN  
Sbjct: 211 LQHTNGGAA-ARPFRTHV---NAFDEPALLRIALELHLKRALVGGIDKVYEMAKTFRNEG 266

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF MLE Y A+ SY+ + +    ++  AA    + + + ++ +          
Sbjct: 267 VDNTHNVEFLMLEAYEAYGSYDTMAELTRELVVDAARAVGRTVVTGRDGSTIDLEAEWR- 325

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                   +  +              H L   A +  + +       +I   +  + +E 
Sbjct: 326 ----HATVHGLVSEAVGETVDVSTPAHHLRTLAARHDVALRDGWDAGEIVLELYEKLVEH 381

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YP     LA  +  +P   + ++L    +EL  A  EL DP+ QR R 
Sbjct: 382 T--LIRPTFVRDYPESVRPLAKKHRTEPGLVEAWDLIINGVELAPAYSELNDPVVQRERL 439

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E++ +       E   +DEDFL  L   MP + G+ +G DRLVML+ G   I E I  P 
Sbjct: 440 EEQARLAAAGDPEANDVDEDFLRALEFGMPPAGGLGLGVDRLVMLLLGIG-IREAILFPT 498

Query: 348 SQSN 351
            ++ 
Sbjct: 499 QRAE 502


>gi|269218271|ref|ZP_06162125.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269212399|gb|EEZ78739.1| lysine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 515

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 85/342 (24%), Positives = 141/342 (41%), Gaps = 14/342 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
                R  +  R  +  SLR  F +  ++E+++  LQ   G     R F T +   +   
Sbjct: 186 MRPAARDMVRLRAGVTKSLRANFDDRGYLELETPMLQTIHGGAA-ARPFITHI---NAYN 241

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
           + LYL+ + E   K+ +  G +K+F     +RN      H PEFT +E Y A+ +Y+ + 
Sbjct: 242 QDLYLRIATELYLKRAVVGGVDKVFEINRNFRNEGADSSHSPEFTAIEAYEAYATYDTMA 301

Query: 134 KDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +   +++ R   +       +      +  +E E          Y +I      +   + 
Sbjct: 302 ELTQSLVQRACLDTLGTTTVA-----LSDGTEYELGGQWARIDLYTSISEAVGEEVTVET 356

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
            R  L   A + GI VA       I   I  E +     +   + +  +P   S L   +
Sbjct: 357 PREKLEAIADRHGISVAPYWVAGKIAEEIFEELVGSK--LWEPSFVLDFPEDTSPLTRPH 414

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
            + P  T++++LY   IEL  A  EL DP+ QR R   +  E      E   +DE+F+  
Sbjct: 415 RSKPGLTEKWDLYVRGIELATAYSELADPVIQRERLVAQSLEAANGDPEAMQLDEEFIEA 474

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+ MG DRL+  +TG   I E I  PF +   +
Sbjct: 475 LEQGFPPCGGMGMGVDRLLTAMTGLG-IRETITFPFVRPQGK 515


>gi|317507814|ref|ZP_07965515.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316253856|gb|EFV13225.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 501

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 85/365 (23%), Positives = 143/365 (39%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R                R  +   LRE      F+E+++  
Sbjct: 146 LRPLPVAHKELSEETRVRQRYLDLIMRPEARAMARTRVAVLRELREALGRRGFLEVETPI 205

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  +  R F T     + +    YL+ +PE   K+ L  G E++F     +RN  
Sbjct: 206 LQTIQGGAS-ARPFVTHS---NALDIDFYLRIAPELFLKRCLVGGLERVFEINRNFRNEG 261

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTMLE Y A+ +Y+ +      +++  A  A               S  +  
Sbjct: 262 IDATHSPEFTMLEAYEAYGTYDTMAVLTREVVQEVARGAFGSTEVV----LADGSTYDVG 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI--RVAHDDTWSDIFSRILIEKI 226
                   Y ++     +    + +   L   A +AG+            I   +    I
Sbjct: 318 GNWAVLEMYPSLSDAVGVPVTPETEVGELRELAVKAGLPEEKIKSFGPGKIVEELWEHLI 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             +  +   T +  +PA  S L   + +    T++++LY    EL     EL+DP+ QR 
Sbjct: 378 GDH--LREPTFVRHFPAETSPLTRQHRSIAGVTEKWDLYVRGFELATGYSELVDPVVQRE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +   +     E  P+DEDFLA +   MP + GI +G DRL+   TG   I + +  
Sbjct: 436 RFQAQALLRSAGDGEAMPLDEDFLAAMEHGMPPAGGIGLGVDRLLTAFTGLG-IRDTVLF 494

Query: 346 PFSQS 350
           P ++ 
Sbjct: 495 PVTRP 499


>gi|304408354|ref|ZP_07390001.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304342643|gb|EFM08490.1| lysyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 494

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 153/369 (41%), Gaps = 23/369 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +     N +  YR R             LL+R  +  SLR +     F+E+D+ 
Sbjct: 129 LHPMPDKWSGMTNTELRYRYRYLDMWLSDETSSRLLRRTSMLRSLRAFLDNKGFLEVDTP 188

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ+S       + F T       + + +YL+ +PE   K+L+A G  K++  A  +RN 
Sbjct: 189 ILQHSASGA-LAKPFVTH---HHALGQDMYLRIAPETYLKRLVAGGFTKLYEVAKCFRNE 244

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H  EFTM+E Y A E+YE  M     +++    E      FS      +      
Sbjct: 245 GISPQHLQEFTMVEGYSAFENYEDAMALIQEMLQYLLSETFGTLSFSIGGEWIDFSEPWL 304

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T  E       ID+       +     L      +            +    +  +  
Sbjct: 305 TVTFRELILEKTGIDIDCYPTVEELHAETLRKHIRLEH--EAIETLGRGNYIDLLYKKAC 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
            P   +   T L  +P   S LA      P  T RF+L  C  E+ NA  EL+DP+EQR 
Sbjct: 363 RP--YLMRPTFLIEHPIDLSPLARANDERPAVTDRFQLVLCGAEIVNAYSELVDPLEQRA 420

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R E++   K     E   +DED+L  +   MP  +G   G +RL+M+VT + NI E ++ 
Sbjct: 421 RLEQQALLKSGGDVEAMGMDEDYLRAMEYGMPPIAGWGFGIERLLMIVTDSPNIKECVYF 480

Query: 346 PFSQSNQEE 354
           P  +S + E
Sbjct: 481 PLVRSMEGE 489


>gi|290559649|gb|EFD92977.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 476

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 164/367 (44%), Gaps = 34/367 (9%)

Query: 1   MHQIPSQPWWNRDF--HYRRR--PFLLKR---------NMIQSSLREYFVENQFIEIDSM 47
           +  +P + +   D    +R+R    ++ R         +++ S +RE   +  + E+   
Sbjct: 130 LLPLPPRWYGLEDTEKRFRKRYLDLIINRESMEKIKKGSIMVSKIREILGKKGYTEVVVP 189

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG   + + F T     + + +  YL+ + E   K+LL  G EK+F  +  +RN 
Sbjct: 190 ILQPIPGGA-NAKPFITHY---NSLDRDFYLKIASELYLKRLLVGGFEKVFDISKNFRNE 245

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEF MLE Y+A+     +++    II+ A   AN             FS+ E 
Sbjct: 246 GIDTRHNPEFMMLEAYQAYGDLSSMLELTEEIIKEAIYAANGTYSIKFGEKNIDFSKFEI 305

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            T+ E       ++                    ++  +  +  +++ +  + I   +I 
Sbjct: 306 KTMEEMVKEKTGVNND--------------QEIIKRGKVLDSKVESYGEAINAIFEAEIS 351

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            N  I     + ++P   S LA     DPRF  RFELY   +E+ NA  EL +PIEQ  R
Sbjct: 352 DN--IINPVFVTKFPIEVSPLAKNMEDDPRFVYRFELYIAGMEIANAFSELNNPIEQIKR 409

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE+E + K K  +ET   D+D +  L   MP + G+ +G DR+ ML T + +I EVI  P
Sbjct: 410 FEEEARRKNKGIDETQEFDKDVIEALGYGMPPTGGVGIGIDRIQMLGTNSKSIKEVIPFP 469

Query: 347 FSQSNQE 353
             ++ ++
Sbjct: 470 QLRTFED 476


>gi|27379498|ref|NP_771027.1| lysyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|27352650|dbj|BAC49652.1| lysyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 354

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 174/342 (50%), Positives = 232/342 (67%), Gaps = 2/342 (0%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFST 64
           P  P+W+ + H  RRPFL  R  +  +LR +F E  F+E+++  LQ SPGNETH+ A  T
Sbjct: 6   PISPFWSPERHLDRRPFLQARGAVTGALRGFFAEQGFMEVETSVLQVSPGNETHLHAPRT 65

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
           E++  D  R   YL+TSPEF+CKKLLAAGE +IF FA  +R+ E+G LH PEFTMLEWYR
Sbjct: 66  EIVRPDGSRASRYLRTSPEFACKKLLAAGEPRIFEFARVFRDRERGDLHLPEFTMLEWYR 125

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A   Y+ +M D + +I  AA+      FSF+    +PF+EPE +TVA AF R+A IDL +
Sbjct: 126 AGAPYDAIMADTVVVIARAAQATGIGTFSFRGRTADPFAEPELLTVAGAFERFAGIDLLS 185

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
           T+   +     L  +   +  IRVA DDTWSDIFS++L+E +EP+LG    TIL  YP+P
Sbjct: 186 TISGDEGNRAALAQMAGGK--IRVAGDDTWSDIFSKVLVEHVEPHLGQGRLTILFEYPSP 243

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           E+ALA +   DPR  +RFE+YAC +EL N   EL D  EQR RF + M EK++ Y E YP
Sbjct: 244 EAALARVKAGDPRVAERFEVYACGVELANGFGELTDAEEQRRRFTESMAEKQRRYGEAYP 303

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +DEDFLA +  MP++SG+A+GFDRLVML +GA  I++V+WTP
Sbjct: 304 LDEDFLAAVAAMPEASGVALGFDRLVMLASGATRIDQVVWTP 345


>gi|309810941|ref|ZP_07704741.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308435095|gb|EFP58927.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 1055

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 85/365 (23%), Positives = 146/365 (40%), Gaps = 21/365 (5%)

Query: 1    MHQIPS--QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  IP    P+ + D   R R             LL+R+    + R+ F    + E+++ 
Sbjct: 697  LSPIPDLHSPFCDPDARIRNRSLDLIVNRDSMDTLLRRSRGVRAFRDAFDALGYTEVETP 756

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G  +  R F T +   +     L+++ +PE   K+L   G +K+F     +RN 
Sbjct: 757  MLQAVHGGAS-ARPFKTHI---NAYGMELFMRIAPELYLKRLAVGGMQKVFELNRNFRNE 812

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT LE Y A+  Y  +      ++   A   N   F+ +          + 
Sbjct: 813  GADATHNPEFTSLEAYDAYGDYLTMRDLTREVLLAVARAVNGGEFAERPRPDGTIERVDL 872

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                     +  +     +       R  +       G+    + +  ++   +  E +E
Sbjct: 873  SGQWPTIPVHEAVSRACGVTLTSASSRDEVAAVCAAHGVDAPREKSAGELVVELYDELVE 932

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S LA  +  DPR ++R++L A   E+  A  EL+DPIEQR R
Sbjct: 933  GQTMF--PTFYIDFPVETSPLARAHRGDPRLSERWDLVAFGAEIGTAYSELVDPIEQRKR 990

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              ++  +      E   +DE FL+ L   MP + G+ +G DR +M++ GA  I   +  P
Sbjct: 991  LTEQSLKAAAGDVEAMSLDEAFLSALEYAMPPTGGLGIGVDRSIMMMLGAP-IRATLAFP 1049

Query: 347  FSQSN 351
            F +  
Sbjct: 1050 FVRPQ 1054


>gi|218509745|ref|ZP_03507623.1| lysyl-tRNA synthetase [Rhizobium etli Brasil 5]
          Length = 340

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 90/343 (26%), Positives = 153/343 (44%), Gaps = 15/343 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            +   +    +R+ I S +R +   + F+E+++  LQ   G  T    F T     + ++
Sbjct: 10  TNEDSKLRFQQRSKIVSGIRRFMENDGFMEVETPMLQSIYGGAT-AEPFKTH---HNTLK 65

Query: 74  KPLYLQTSPEFSCKKLLAAGE-EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
             +YL+ +PE   K+ L +G  +K+F     +RN      H PEFTM+E Y A+  YE +
Sbjct: 66  LDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDM 125

Query: 133 MKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           M     +    A  +     F F +   +     + + + +A      ID      + + 
Sbjct: 126 MDVVERLFETLALSIHGTTEFDFGDKRLSFKGPFKRVPMPDAVKEATGIDFLAIKTDEEA 185

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                           V  D TW +  + I  EK+E    +   + +  +P   S  A  
Sbjct: 186 RAAAKAAGF------AVEKDWTWGECLAFIFEEKVEAT--LIQPSHVTHFPKDISPFAKE 237

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P +PR  +RFE Y    EL NA  EL DP EQR R  +++++      +   +DE+FL 
Sbjct: 238 VPGEPRLVERFETYCNAWELGNAFSELNDPEEQRRRMVEQLEQAHARGEKEKQLDEEFLD 297

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            +   MP + G+ +G DRL+ML+T A +I +VI  P  ++  +
Sbjct: 298 AIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDVILFPARRNKAD 340


>gi|269796472|ref|YP_003315927.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542]
 gi|269098657|gb|ACZ23093.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542]
          Length = 510

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 141/366 (38%), Gaps = 25/366 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPFLLKRNM-----------IQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R   L               +  SLRE F +  ++EI++  
Sbjct: 156 LRPLPVLHRELSEEARVRQRYVDLIARPAAREAARLRAGVVRSLRENFHDRGYMEIETPM 215

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T +   +     L+L+ +PE   K+ +  G E++F     +RN  
Sbjct: 216 LQTIHGGAA-ARPFTTHM---NAFDIDLFLRIAPELFLKRAVVGGIERVFEINRNFRNEG 271

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y A+  Y  +     N+++ AA                   E E  
Sbjct: 272 ADSTHSPEFAMLEAYEAYGDYNSMAVLTKNLVQKAALDMFGTTLV----TLASGEEYELG 327

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIE 227
                   Y ++      +   Q     L   A    I +         +   +    + 
Sbjct: 328 GDWAELTMYGSLSEALGEEITPQTTVARLTELADAVEISIDPKKVNHGKLVEELWEHHV- 386

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S L   + + P   ++++LY    EL  A  EL+DP+ QR R
Sbjct: 387 -GNSLYAPTFVRDFPVETSPLTRDHRSVPGQVEKWDLYVRGFELATAYSELVDPVVQRQR 445

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE +        +E   +DEDFL  +   MP S G+ MG DRL+M +TG   I E I  P
Sbjct: 446 FEAQAVLAAAGDDEAMVLDEDFLTAMEYAMPPSGGMGMGLDRLLMALTGLG-IRETILFP 504

Query: 347 FSQSNQ 352
             +  +
Sbjct: 505 LVKPQR 510


>gi|217976643|ref|YP_002360790.1| Lysine--tRNA ligase [Methylocella silvestris BL2]
 gi|217502019|gb|ACK49428.1| Lysine--tRNA ligase [Methylocella silvestris BL2]
          Length = 351

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 177/344 (51%), Positives = 229/344 (66%), Gaps = 2/344 (0%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
            PWW  D +  RRPFL  R  + ++ R +F    F+E+D+ +LQ SPGNE HI AF+T++
Sbjct: 6   SPWWRPDRYADRRPFLKARTKMAAAARSFFGAQHFVEVDTAALQISPGNEAHISAFATQI 65

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
           I       PLYL +SPEF+ KKLLAAGEE+IF F HA+RN E+  LH PEFT+LEWYRA 
Sbjct: 66  ISPSAETSPLYLHSSPEFAMKKLLAAGEERIFSFGHAFRNRERDKLHHPEFTLLEWYRAK 125

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
             Y++L++DC  ++   A+ A   +      + +PF + E + VAEAF RYA +DL  T+
Sbjct: 126 TPYQRLIEDCAGLLAALAQAAGADLLVHGGASADPFEDLELLGVAEAFDRYAGVDLLATV 185

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           D     DR  L   A + G+RV  DD+WSDIFS+IL  KIEP LG    TIL  YPA E+
Sbjct: 186 DG-SATDRDALASAAGKIGVRVVADDSWSDIFSKILSVKIEPQLGHGRATILMDYPASEA 244

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALAN+   D R  +RFELYAC +EL N   EL DP+EQR R   EM E+++IY E+YP+D
Sbjct: 245 ALANLQE-DQRLAERFELYACGVELANGFGELTDPVEQRRRLVAEMAERQRIYGESYPLD 303

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           EDFLA L  MP SSG+A+GFDRLVML T A  I +VIWTP +++
Sbjct: 304 EDFLAALALMPPSSGVALGFDRLVMLATAAERIEQVIWTPVAEA 347


>gi|159114319|ref|XP_001707384.1| Lysyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157435489|gb|EDO79710.1| Lysyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 576

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 85/380 (22%), Positives = 156/380 (41%), Gaps = 40/380 (10%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF----------LLKRNMIQSSLREYF-VENQFIEIDSM 47
           +H IP+ P    D    +R+R            +++R+ I + +R +   +  ++E+++ 
Sbjct: 200 LHMIPNSPSALTDINARFRQRYLDFIINNTGQKIVQRSGIINFIRRFMIDQRNYLEVETP 259

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     + F       + +   +YL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 260 MLQTVHGGAA-AQPFV---CKSNDLGHDVYLRIAPELFLKRLVVGGLNRVFEINKNFRNE 315

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI---------------- 151
                H PEFTM+E Y A++  E +      ++       N                   
Sbjct: 316 SSDQTHSPEFTMMEAYSAYDDLEDMCDLIEGLVSRLVRWYNITYNHVRLPDEKKHYKLTF 375

Query: 152 --FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                +  + +       + + E   +  +I     LD  +      L    ++  +   
Sbjct: 376 VSHKGETYDIDFSRPWRRVPIIETLEQLLSIKFPRPLDGEECNG--FLVSLLERLDLECK 433

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
              T + +  +++   +E          L  +P   S LA  + + P   +RFE++    
Sbjct: 434 PPLTTARMLDKLVERYLE--TLTPNPIFLMYHPVLMSPLAKPHRSIPELAERFEVFISCF 491

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDR 328
           E+ NA  EL +PI QR  F+ ++++K     +    DEDF  CL   +P + GI +G DR
Sbjct: 492 EVSNAYTELNNPIIQRENFQAQIRDKAAGDMDAMEYDEDFCKCLDYGLPPTGGIGIGIDR 551

Query: 329 LVMLVTGANNINEVIWTPFS 348
           LVML+T ++ I EVI  P  
Sbjct: 552 LVMLLTNSSTIREVIAFPLM 571


>gi|115524935|ref|YP_781846.1| tRNA synthetase, class II (D, K and N) [Rhodopseudomonas palustris
           BisA53]
 gi|115518882|gb|ABJ06866.1| tRNA synthetase, class II (D, K and N) [Rhodopseudomonas palustris
           BisA53]
          Length = 350

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 176/342 (51%), Positives = 229/342 (66%), Gaps = 2/342 (0%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFST 64
           P  PWW    H  RRPFL  R+ I  ++RE+FV   FIE+++  LQ SPGNETH+ A  T
Sbjct: 6   PVSPWWTPSRHLDRRPFLRARSEITRAVREWFVHEGFIEVETGVLQASPGNETHLHAPRT 65

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
           EL   D      Y +TSPEF+CKKLLAAGE +I  FA  +R+ E+G LH PEFTMLEWYR
Sbjct: 66  ELHPPDGPVLTRYFRTSPEFACKKLLAAGESRIVEFAKVFRDRERGDLHLPEFTMLEWYR 125

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A+  Y+ +M DC+ +I  AA  A  K+FSF+    +P +EP+ +TVA+AF+ +  IDL +
Sbjct: 126 ANAPYQAVMTDCVAVIVEAARAAGTKLFSFRGRIADPHAEPQLLTVAQAFSDFCGIDLLS 185

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
           T+   D          A    +R+A DD WSDIFS+IL+E IEPNLG    T+L  YPAP
Sbjct: 186 TIK--DGRGDREALAAASHRWVRLAGDDDWSDIFSKILVEHIEPNLGQGRLTLLHDYPAP 243

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           E+ALA +  ADPR  +RFE+YAC +EL N   EL D  EQR RFE  M EK++ Y E YP
Sbjct: 244 EAALARLSSADPRVAERFEVYACGVELANGFGELTDAAEQRARFEHAMAEKQRRYGERYP 303

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +DE+FLA + +MP++SG+A+GFDRLVML  GA  I++V+WTP
Sbjct: 304 LDEEFLAAVGQMPEASGVALGFDRLVMLAAGATRIDQVVWTP 345


>gi|302347902|ref|YP_003815540.1| lysyl-tRNA synthetase (LysS) [Acidilobus saccharovorans 345-15]
 gi|302328314|gb|ADL18509.1| lysyl-tRNA synthetase (LysS) [Acidilobus saccharovorans 345-15]
          Length = 498

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 85/340 (25%), Positives = 146/340 (42%), Gaps = 19/340 (5%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R  +  R      +R+Y     F+E+++  LQ   G     + F T +   + + +  YL
Sbjct: 166 RRAMEVRFNTIKEIRQYLYSKGFVEVETPVLQPVYGGA-LAKPFMTHV---NALDEDWYL 221

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + S E   K+ +  G +K+F     +RN +    H PEFTM+E Y A+  Y  +M    +
Sbjct: 222 RISLELYLKRFIVGGFDKVFEIGKVFRNEDIDVTHNPEFTMMELYWAYADYNDIMDLTED 281

Query: 139 IIRCAAEVANQKIFSFQNV------NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +IR  A            +        +        T+ +  +     ++    D  D+ 
Sbjct: 282 MIRTVAAKVLGTTQLRIPMPDGSVAEVDVGQRFRRETMFDLLSEALGKNIEEVSD--DEM 339

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
            R L  +     G   +       +F +++         +   T +  YP   + L   +
Sbjct: 340 KRMLDQMGLVPRGGVYSRGLMVEKLFDKLV------TPKLIQPTFVLDYPIETTPLCKPH 393

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
            + P   +RFELY   +EL NA  EL DP+ Q   F++E + +K+   E +P D DF+  
Sbjct: 394 RSKPGLVERFELYVAGVELANAYTELNDPVLQDRLFKEEQEMRKRGDLEAHPYDVDFVRA 453

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           L   MP + G+ +G DRLVM+ TG ++I EV+  P   + 
Sbjct: 454 LSYGMPPTGGLGVGIDRLVMMFTGVSSIKEVLPFPMVSAK 493


>gi|317507688|ref|ZP_07965395.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254015|gb|EFV13378.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 1093

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 139/365 (38%), Gaps = 33/365 (9%)

Query: 1    MHQIPSQPWWNRD----FHYRR---------RPFLLKRNMIQSSLREYFVENQFIEIDSM 47
            +  +P +     D       R          R  L  R  +  +LRE      F+E+++ 
Sbjct: 748  LRPLPDKRRGLTDPEAKVRLRHVELMTNPQARRALSVRGSVLRALREQLWGEGFLEVETP 807

Query: 48   SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             LQ   G   +   F T +   +    PLYL+ +PE   K+LL  G E++F     +RN 
Sbjct: 808  VLQRVHGGA-NAEPFRTHI---NAYDMPLYLRIAPELYLKRLLVGGMERVFEIGRVFRNE 863

Query: 108  EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 H PEFT+LE Y+AH  Y  +      ++R  A           +           
Sbjct: 864  GVDGTHNPEFTLLEAYQAHSDYRGMRDLTEQMLRACARAVG------NDGPLAAPGPWPM 917

Query: 168  ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            I +  A +     ++      P       L       G     D     +   +    +E
Sbjct: 918  IPMLTAVSHALGDEVDENTAVP------KLRQHLASRGFEFRPDWDAGQLLLELYERLVE 971

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    T    +P   S L   +P  P  T+R++L    +E+  A  EL DP+EQR R
Sbjct: 972  HR--TTTPTFYSDFPLSVSPLTKQHPDRPAITQRWDLVIGGMEVATAYSELNDPVEQRRR 1029

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             + +         E   +DEDFL  L   MP + G+ +G DR+VML+T   NI E +  P
Sbjct: 1030 LQAQSAAAAGGDPEAMELDEDFLEALEYAMPPTGGLGVGVDRIVMLLT-ERNIRETLAFP 1088

Query: 347  FSQSN 351
              +  
Sbjct: 1089 LVKPK 1093


>gi|310816116|ref|YP_003964080.1| Lysine--tRNA ligase [Ketogulonicigenium vulgare Y25]
 gi|308754851|gb|ADO42780.1| Lysine--tRNA ligase [Ketogulonicigenium vulgare Y25]
          Length = 354

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 175/350 (50%), Positives = 218/350 (62%), Gaps = 7/350 (2%)

Query: 5   PSQPWWNRDF-------HYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
           P+  WW           H  RR  LL RN IQ +LRE      FIE+D   LQ +P NE 
Sbjct: 4   PADHWWAPHRQGGPPPRHAERRTLLLARNRIQRALREMLDAQDFIEVDPAGLQVTPSNEA 63

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
           H+  F+T  I  D   + +YL TSPEF+ KKLLAAGE  I+ FAH WRN E+G LH PEF
Sbjct: 64  HLHGFATTAIGNDGAPRQMYLHTSPEFAMKKLLAAGEVAIYAFAHVWRNRERGRLHSPEF 123

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           TMLEWYRA   Y QLM D   +I  AA++       + +V C+P++ PE ++VA+AF RY
Sbjct: 124 TMLEWYRAGADYTQLMDDTCAMIARAAQITGAAQLYYNDVACDPYAAPERLSVADAFQRY 183

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
           A IDL  ++      D   L     QAGI    DDTWSD+ SR+L+ ++EP+LG    TI
Sbjct: 184 AGIDLLQSIQPDGSTDAAALARALDQAGISHCADDTWSDMLSRVLVARVEPHLGHGRITI 243

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           LD+YPA E+ALA   P D R ++RFE+Y C +EL N   EL D  EQR RF  EM EK++
Sbjct: 244 LDQYPAAEAALARRLPGDARLSERFEVYTCGVELANGFGELTDADEQRRRFTAEMDEKER 303

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           IY E YPIDE  LA L  MP ++GIA+GFDRLVML TGA  I++VIWTP 
Sbjct: 304 IYAERYPIDESLLAALPLMPPTAGIALGFDRLVMLATGAPRIDDVIWTPV 353


>gi|90424305|ref|YP_532675.1| lysine--tRNA ligase [Rhodopseudomonas palustris BisB18]
 gi|90106319|gb|ABD88356.1| Lysine--tRNA ligase [Rhodopseudomonas palustris BisB18]
          Length = 350

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 173/342 (50%), Positives = 231/342 (67%), Gaps = 2/342 (0%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFST 64
           P  PWW    H  R PFL  R  I  + R++F +  FIE+++  LQ SPGNETH+ A  T
Sbjct: 6   PISPWWTPSRHLDRAPFLRARAEITRATRQWFADRGFIEVETGILQASPGNETHLHAPRT 65

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
           EL      R   YL+TSPEF+CKKLLAAGE+KI  FA  +R+ E+G LH PEFTMLEWYR
Sbjct: 66  ELTTGSGERLCRYLRTSPEFACKKLLAAGEQKIVEFARVFRDRERGDLHLPEFTMLEWYR 125

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A   Y+ ++ DC+ +I  AA  A  ++F+F+    +PF+ P+ ++VA+AF  + +IDL  
Sbjct: 126 AGAPYQAVVDDCVAVIGEAARAAGTRLFAFRGRIADPFAAPQLLSVAQAFRSFTDIDLLA 185

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
           ++   + PDR  L   AQ+  ++V+ DD WSDIFS+IL+E IEPNLG    T+L  YPAP
Sbjct: 186 SIGGGE-PDRAALAAMAQRW-VKVSDDDDWSDIFSKILVEHIEPNLGQGQLTVLCEYPAP 243

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           E+ALA   P+DPR  +RFE+YAC +EL N   EL D  EQR RF K M EK++ Y E YP
Sbjct: 244 EAALARTLPSDPRVAERFEVYACGVELANGFGELTDAQEQRARFTKAMDEKQRRYGERYP 303

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +DE+FL  + +MP++SG+A+GFDRLVML  GA  I+EV+WTP
Sbjct: 304 LDEEFLEAVGQMPEASGVALGFDRLVMLAAGARRIDEVVWTP 345


>gi|332669095|ref|YP_004452103.1| lysyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332338133|gb|AEE44716.1| lysyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 511

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 85/367 (23%), Positives = 148/367 (40%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWW--------------NRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDS 46
           +  +P+                  +   + R R  +  R  +  S+R+      F+E+++
Sbjct: 155 IRPLPNVYEGAELSEEARVRQRYVDLIVNQRSRDMVRTRAAVLRSVRDNLHRRGFLEVET 214

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             LQ  P      R F T +   +    PL+L+ +PE   K+    G E++F     +RN
Sbjct: 215 PMLQVRPEGAA-ARQFETHM---NAFDIPLFLRIAPELFLKRAAVGGVERVFEINRNFRN 270

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                 H PEF MLE Y A+  Y+ + +   ++++ AA  A         V     SE +
Sbjct: 271 EGVDATHSPEFAMLEAYEAYGDYDTIAELTQDLVQTAARDAFGST----TVTLADGSEYD 326

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEK 225
                E    Y ++      +        +L     +AG+ +A        +   +    
Sbjct: 327 LGGEWERLPMYDSLSAALGEEITHDTTDEVLLALLDKAGVELAPGQRNHGKMVEELWEHH 386

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +  +  +   T +  +P   S L   +       ++++LY   +EL     EL+DP+ QR
Sbjct: 387 VGHH--LTAPTFVRDFPVETSPLVRDHRHKAGLVEKWDLYVRGMELATGYSELVDPVIQR 444

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +     +  ++   IDEDFL  +   MP S G+ MG DRL++ +TG   I E I 
Sbjct: 445 QRFEAQALLAARGDDDAMRIDEDFLTAMEFAMPPSGGMGMGIDRLLIALTGLG-IRETIL 503

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 504 FPLVKPQ 510


>gi|308159144|gb|EFO61691.1| Lysyl-tRNA synthetase [Giardia lamblia P15]
          Length = 576

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 84/380 (22%), Positives = 154/380 (40%), Gaps = 40/380 (10%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF----------LLKRNMIQSSLREYF-VENQFIEIDSM 47
           +H IP+ P    D    +R+R            +++R+ I + +R +   +  ++E+++ 
Sbjct: 200 LHMIPNSPSALTDINARFRQRYLDFIINNTGQKIVQRSGIINFIRRFMIDQRNYLEVETP 259

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     + F       + +   +YL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 260 MLQTVHGGAA-AQPFVCRS---NDLGHDVYLRIAPELFLKRLVVGGLNRVFEINKNFRNE 315

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI---------------- 151
                H PEFTM+E Y A++  E +     +++       N                   
Sbjct: 316 SSDQTHSPEFTMMEAYSAYDDLEDMCDLVEDLVSRLVRWYNITYNHVRLPDEKKHYKLKF 375

Query: 152 --FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                +  + +       + + E   +  +I     LD  +      L        +   
Sbjct: 376 VSHKGETYDIDFSRPWRRVPIIETLEQLLSIKFPRPLDGEECN--AFLISLLGHLDLECK 433

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
              T + +  +++   +E          L  +P   S LA  + +     +RFE++    
Sbjct: 434 PPLTTARMLDKLVERYLE--TLTPNPIFLMYHPVLMSPLAKPHRSISELAERFEVFISCF 491

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDR 328
           E+ NA  EL +PI QR  F+ ++++K     +    DEDF  CL   +P + GI +G DR
Sbjct: 492 EVSNAYTELNNPIIQRDNFQAQVRDKAAGDMDAMEYDEDFCKCLDYGLPPTGGIGIGIDR 551

Query: 329 LVMLVTGANNINEVIWTPFS 348
           LVML+T ++ I EVI  P  
Sbjct: 552 LVMLLTNSSTIREVIAFPLM 571


>gi|170749146|ref|YP_001755406.1| lysine--tRNA ligase [Methylobacterium radiotolerans JCM 2831]
 gi|170655668|gb|ACB24723.1| Lysine--tRNA ligase [Methylobacterium radiotolerans JCM 2831]
          Length = 351

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 181/347 (52%), Positives = 236/347 (68%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFST 64
            + PWW    H  RRP LL RN + ++ R +F +  F+E ++  LQ SPGNE H+ AF+T
Sbjct: 4   SASPWWTAGRHADRRPALLLRNRVLAAFRGWFADRDFVEAEAACLQVSPGNEAHLSAFAT 63

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
           E I     R PLYL TSPEF+CKKLLAAGE ++F  A  +RN E+G LH PEFTMLEWYR
Sbjct: 64  EAIGASGARTPLYLHTSPEFACKKLLAAGETRLFSVARVFRNRERGPLHHPEFTMLEWYR 123

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A   Y  LM DC +++  AAE A  + F+F+    +PF+EPE +T+AEAF R+A IDL  
Sbjct: 124 AGAPYTALMADCADLLAGAAETAGARRFAFRGRETDPFAEPERLTLAEAFDRFAGIDLLA 183

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
           ++      DR  L      AG+RVA DDTW+D+FSR+L+ ++EP+LG+   TIL  YP  
Sbjct: 184 SVAPGGGTDREALAAAVAGAGLRVAPDDTWADLFSRVLVARVEPHLGLGRPTILCEYPIS 243

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           E+ALA   P DPR  +RFELYAC +EL NA  EL DP EQR RFE EM EK+++Y E YP
Sbjct: 244 EAALARPAPHDPRVAERFELYACGVELANAFGELTDPAEQRRRFEAEMAEKQRVYGERYP 303

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           ID++FLA L  MP++SGIA+GFDRL ML  GA+ + +VIWTP +++ 
Sbjct: 304 IDDEFLAALAVMPEASGIALGFDRLAMLACGASRVEDVIWTPVAETR 350


>gi|146304908|ref|YP_001192224.1| lysyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145703158|gb|ABP96300.1| lysyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 496

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 85/338 (25%), Positives = 142/338 (42%), Gaps = 17/338 (5%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R F+  R  I   +R    E  FIE+++  LQ   G     R F + +   +++ +  YL
Sbjct: 167 RRFMETRFKIIREIRNILGEEGFIEVETPILQPVYGGA-LARPFKSHV---NYLNEDWYL 222

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + S E   K+ +  G  K+F     +RN +    H PEFT++E Y A+  Y  +M     
Sbjct: 223 RISLELYLKRFIVGGFNKVFEIGKVFRNEDIDVTHNPEFTLMELYWAYADYNDIMDLTER 282

Query: 139 IIRCAA-EVANQKIFSFQNVNC---NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
           + +  A  V +     ++               +++ ++ +           +  +  D 
Sbjct: 283 LFKQLADRVLHSTKIPYKVGEKTVEINLESFRRVSMYDSLSEALG------KNVEEMTDD 336

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L  L  +   +          +  ++  + + P+  +   T +  YP   + L   +  
Sbjct: 337 QLKELMQRNGLVPRGSLYIRGLMIEKLFDKLVTPS--LVQPTFVTDYPIETTPLCKPHRN 394

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
            P   +RFELY   +E  NA  EL DPI Q   F +E    K+   E +P D+DF+  L 
Sbjct: 395 KPGLVERFELYIAGVEFANAYTELNDPILQDKLFREEQDMMKRGDQEAHPYDKDFINALS 454

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
             MP + G+ +G DRLVML T   +I EVI  P   S 
Sbjct: 455 YGMPPTGGLGIGIDRLVMLFTNNQSIKEVIPFPMVSSK 492


>gi|182680127|ref|YP_001834273.1| lysine--tRNA ligase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182636010|gb|ACB96784.1| Lysine--tRNA ligase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 361

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 179/352 (50%), Positives = 227/352 (64%), Gaps = 2/352 (0%)

Query: 2   HQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
             +   PWW++  ++ RRP LL R  +  + R +F    FIE+D+  LQ SPGNETHI A
Sbjct: 10  RALSHAPWWDKKAYHLRRPKLLARARMIEATRTFFKAQDFIEVDTAILQVSPGNETHIGA 69

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F+T          PLYL TSPEF+ KKLLAAGEE+IF F HA+RN E+  LH PEF MLE
Sbjct: 70  FATAWRPLGGNSAPLYLHTSPEFAAKKLLAAGEERIFTFTHAFRNDERDRLHHPEFMMLE 129

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
           WYRA   +E LM DC  ++   A+ A  KI S++    +PF+EPE +TV EAF RYA ID
Sbjct: 130 WYRAEAPFEVLMFDCARLLALTAQAAEAKILSYRGRVADPFTEPEQLTVCEAFQRYAGID 189

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           L   L    +        + ++ G+RVA DD WSD+FS+IL ++IEP LG    T L  Y
Sbjct: 190 LEAFLPGGPET-FEAFAAKTRELGLRVAPDDDWSDLFSKILSDRIEPKLGQGRATFLTDY 248

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           PA E+AL     AD RF +RFELYAC +EL N   EL DP+EQ  RFE  M E+ +IY E
Sbjct: 249 PACEAAL-ARLRADSRFAERFELYACGVELANGFGELTDPVEQERRFEAAMAERLRIYGE 307

Query: 302 TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            YPID DFLA L +MP++SGIA GFDRL ML TG+++I EV+WTP ++S  E
Sbjct: 308 AYPIDPDFLAALAQMPEASGIAFGFDRLAMLATGSDDIAEVLWTPVAESPGE 359


>gi|87307059|ref|ZP_01089205.1| lysyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87290432|gb|EAQ82320.1| lysyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 686

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 143/367 (38%), Gaps = 34/367 (9%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +   P +     D   R+R                +KR  I  S+R+   +  FIEI+  
Sbjct: 334 LDPPPEKHKGLTDPELRQRMRYLDLAHTDGAIERFVKRTEIVKSIRKTLADQNFIEIEGP 393

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G     R F T     + +   LY++ + E   K+LL  G E++F     +RN 
Sbjct: 394 TLHAIAGGAA-ARPFITH---HNALGMELYMRIALELHLKRLLVGGMERVFELGRVYRNE 449

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPE 166
                H PEFTMLE Y+A+  Y  +M     +I  A           +     N     E
Sbjct: 450 GISPKHNPEFTMLEVYQAYGDYRSMMDLTEAVISGAINAIGASFELPYGETMVNFAPPFE 509

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T AE F     +D           D   +   A   G+          I + I  EK+
Sbjct: 510 RRTYAELFQENTGVDP---------TDDAAVKRYAINLGLE-TEGKHPDVIRNEIFEEKV 559

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +     +  YPA    L      +P   +RFEL+   +E+ NA  EL DP  Q  
Sbjct: 560 EDQ--LKGPIFVMDYPASICPLTKRKTDNPAVAERFELFINGMEVANAYTELNDPDLQDK 617

Query: 287 RFEKEMQEKKKIYNETY-PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            F  ++    +   ++   +D DF+  L   MP + G+ +G DRLVML+T    I E+I 
Sbjct: 618 LFRTQLD--GQADEDSMAKMDHDFIRALRNGMPPAGGLGIGIDRLVMLLTNTQTIREIIL 675

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 676 FPLLRHE 682


>gi|300022959|ref|YP_003755570.1| lysine--tRNA ligase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524780|gb|ADJ23249.1| Lysine--tRNA ligase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 349

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 176/342 (51%), Positives = 221/342 (64%), Gaps = 1/342 (0%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWWN   H  RRPFL+ R  I+++LR++F    FIE++   LQ SPGNETH+ AF TE
Sbjct: 4   ASPWWNPGRHSDRRPFLVARGRIKTALRDWFTTQGFIEVEPGCLQVSPGNETHLHAFRTE 63

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
           L+  D  R+ LYL TSPEF+ KKLLAAGE KIF F   +RN E G LH  EFTMLEWYRA
Sbjct: 64  LVGTDLTRRDLYLHTSPEFAMKKLLAAGETKIFTFTPVFRNREHGKLHASEFTMLEWYRA 123

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            E YE L  DC +I+  AA    +  +S++  +C+     ++ T+ +AF  +A+I L  T
Sbjct: 124 GEPYETLWSDCASILYIAARACERMQWSYRGKSCDLTKGYDWTTLYQAFVHFADIPLHET 183

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +      DR  L   AQ  GIRV +DDTWSDIFS++L+EKIEP LG++   IL  YP  E
Sbjct: 184 MTAT-SVDRDRLAAHAQAQGIRVGNDDTWSDIFSKVLVEKIEPGLGVHRPEILCEYPINE 242

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     DP   +RFELY C +EL N   EL D  EQR RFE  M +K +IY E YPI
Sbjct: 243 AALARPTALDPAVAERFELYVCGVELANGFGELTDAGEQRRRFETWMADKSRIYGERYPI 302

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DEDFL+ L  MP +SG A+GFDRL ML +GA  I +VIWTP 
Sbjct: 303 DEDFLSALAAMPPASGCALGFDRLAMLASGAERIEQVIWTPL 344


>gi|308809193|ref|XP_003081906.1| putative lysyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116060373|emb|CAL55709.1| putative lysyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 349

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 83/350 (23%), Positives = 148/350 (42%), Gaps = 35/350 (10%)

Query: 29  QSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKK 88
            S++R    +  F+E ++  L  S G     + F+T     + +   L L+ + E   K+
Sbjct: 2   ISTIRRMLDDQGFMEFETPVLHDSAGGA-DAKPFNT---FHNALGMQLTLRIATELHLKR 57

Query: 89  LLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VA 147
           L+  G E+++     +RN      H PEFT +E Y+A+     +++    +I   A    
Sbjct: 58  LVVGGFERVYEIGRIFRNEGLSTRHNPEFTSIEVYQAYADVTDMLELTEEMICQCAMKAC 117

Query: 148 NQKIFSFQNVNCN-PFSEPEYITVAEAFARYANIDLGTTLDNPD------QPDRHLLYLQ 200
                 + +   +          + +       +D+ +  D+ D       P       +
Sbjct: 118 GTLTIPYGDHTIDLSKRPWRRAPMNDLVKEATGVDVMSFGDDLDGAKAAAIPALKAHSKK 177

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A +    V    +   + + +     E   G+   T +  +P   S LA  +   P  T+
Sbjct: 178 AGEGIKGVKTAVSVGHVLNEMFEATCES--GLIQPTFVLDHPVEISPLAKPHRDKPGVTE 235

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKE--------MQEKKK----------IYNET 302
           RFEL+    EL N+  EL DPI+QR R EK+          +++           + +E+
Sbjct: 236 RFELFVVGRELANSFSELTDPIDQRGRLEKQIESHAKTSAAQREAAAGDKDVLKELDDES 295

Query: 303 Y--PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           Y   +DEDFL  L   MP ++G+ +G DRLVML+T + +I +VI  P  +
Sbjct: 296 YDVELDEDFLTALEYGMPPTAGMGLGIDRLVMLLTNSPSIRDVIAFPLLK 345


>gi|328769085|gb|EGF79130.1| hypothetical protein BATDEDRAFT_90127 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 508

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 94/370 (25%), Positives = 154/370 (41%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQP--WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H  P +     + +  YR+R              LKR+ I  ++R +F   +F+EI++ 
Sbjct: 136 LHIYPKKHVLLEDENIRYRQRYLDMLVHRSTVDLFLKRSKIIRTIRSFFDTREFVEIETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G   + + F+T + + +     L ++ +PE   K+L+  G ++++     +RN 
Sbjct: 196 VLSLMAGGA-NAKPFTTRMDVMN---LDLQMRIAPELYLKQLVIGGIDRVYEIGKQFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQ------NVNCNP 161
                H PEFT  E+Y A+ +++Q M+   N+ R  A   N                 + 
Sbjct: 252 GIDKTHNPEFTTCEFYMAYGTFDQAMELTENLFRDVATKVNGSTIVEWETADGQIHQIDF 311

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
               + I +     +   +   T  +  DQ     L     +  I V    T   I  ++
Sbjct: 312 SQPFKRIEIIPELEKALGV---TLPNVNDQSSMETLLQLCNERNIVVQKPFTLPRILDKL 368

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           + E IEP       T +  +P   S L      +P    RFEL+    EL NA  EL DP
Sbjct: 369 ISELIEPKCID--PTFVVGHPVCMSPL-AKSGENPELADRFELFVGTKELANAYMELNDP 425

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            EQR RF  +   + +   E  P+DE F   L   +P + G  +G DR  ML+TG   I 
Sbjct: 426 AEQRRRFASQRMARDQGDVEAQPMDESFCLALEYALPPTVGWGLGIDRFCMLMTGTKRIK 485

Query: 341 EVIWTPFSQS 350
           E+I  P  + 
Sbjct: 486 ELIAFPILKP 495


>gi|144898376|emb|CAM75240.1| lysyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 348

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 151/341 (44%), Positives = 208/341 (60%), Gaps = 2/341 (0%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W+      R P+L  R  +  ++R +F    F E+++  LQ SPG E H++AF+T L   
Sbjct: 8   WHPQSLAERLPYLQCRRQVLRAVRAFFDAGDFTEVETPCLQISPGLEPHLKAFATRLEDP 67

Query: 70  -DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                +PLYL TSPEF+ KKLL AG E+IF  AH +RNGE+   H PEFTMLEWYRA  S
Sbjct: 68  WGGAAQPLYLHTSPEFAMKKLLVAGMERIFQIAHVFRNGERSDTHSPEFTMLEWYRAGGS 127

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             Q+M D   ++R     A        ++ C+P    + +++A+AF ++  ID+  T  +
Sbjct: 128 IGQMMDDIEALVRACVTAAGGTHLHRADMACDPLVPWQRLSIAQAFDQFCGIDVLATAPD 187

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P +PDR  L  +A + GI V+H D W DIF +IL+++IEP+LG+   TIL  YP   +AL
Sbjct: 188 PWRPDRTALAAEAVRIGISVSHSDAWDDIFFKILLDRIEPHLGMTVPTILHSYPVSMAAL 247

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A   P DPR  +RFE YAC +ELCNA  EL D  EQ  RF+ +M  K+K+Y E YPID  
Sbjct: 248 ARPDPDDPRVAERFEAYACGVELCNAFGELTDADEQERRFQADMDLKEKLYGERYPIDPG 307

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           F+  L   MPQS+G A+G DRL+ML+ GA  I++V+W P  
Sbjct: 308 FIDALRHGMPQSAGNALGLDRLIMLIAGAQRIDQVLWLPVD 348


>gi|148255401|ref|YP_001239986.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase)
           [Bradyrhizobium sp. BTAi1]
 gi|146407574|gb|ABQ36080.1| Putative lysyl-tRNA synthetase (Lysine--tRNA ligase)
           [Bradyrhizobium sp. BTAi1]
          Length = 351

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 174/340 (51%), Positives = 229/340 (67%), Gaps = 2/340 (0%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
            PWW+   H   RPFL  R  I  ++R +F E  F E+++  LQ SPGNETH+ A +TEL
Sbjct: 9   SPWWSPQRHADVRPFLQARAAIMRAVRAWFAEQGFTEVETGILQVSPGNETHLHAPATEL 68

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
              D  R   YL+TSPEF+CKKLLAAGE +IF FA  +R+ E+G LH PEFTMLEWYRA 
Sbjct: 69  TGADGTRLKRYLRTSPEFACKKLLAAGERRIFEFARVFRDRERGDLHLPEFTMLEWYRAE 128

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
             Y+ +M D + +I  AA+    + FSF+    +PF+EPE +TVA AFARYA IDL  T+
Sbjct: 129 APYDAIMADAVVLIAHAAQATGIQQFSFRGRTADPFAEPELLTVAAAFARYAGIDLLATI 188

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
            N  +         A    IR++ DDTWSD+FS++L+E +EP+LG    T+L  YP+PE+
Sbjct: 189 RN--RTGDRAALAAAAAGKIRISDDDTWSDLFSKLLVEHVEPHLGQGRLTVLYEYPSPEA 246

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA +    P   +RFE+YAC +EL N   EL D  EQR RFE++M EK++ Y E YP+D
Sbjct: 247 ALARVKAGQPEVAERFEVYACGVELANGFGELTDAAEQRRRFEQDMTEKQRRYGERYPLD 306

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           EDFLA + EMPQ+SG+A+GFDRLVML +GA  I++V+WTP
Sbjct: 307 EDFLAAVAEMPQASGVALGFDRLVMLASGAARIDQVVWTP 346


>gi|297820926|ref|XP_002878346.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297324184|gb|EFH54605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 540

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 81/366 (22%), Positives = 152/366 (41%), Gaps = 30/366 (8%)

Query: 9   WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
             +++  YR+R              + +  I   +R Y  +  F+E+++  +        
Sbjct: 168 LKDQEIRYRQRYLDLMLNDEVCQIFMTKTKIIKYIRRYLDDLDFLEVETPMMSMI----A 223

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
              A        + +   ++++ +PE   K+L+  G E+++     +RN      H PEF
Sbjct: 224 GGAAARRFATHHNDMNMKMFMRITPELYLKQLVVGGFERVYEIGKQFRNEGIDLTHNPEF 283

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNCNPFSEPEYIT 169
           T  E+Y A   Y  LM+    ++    +          +        +  +       I 
Sbjct: 284 TTCEFYMAFADYNDLMEMSEKLLSGMVKELTGGYKIKYHANGYDKEPIEIDFTPPFRRIE 343

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           +     + AN+++   L + +      L    ++  +      T + +  +++   +E  
Sbjct: 344 MMVELDKVANLNIPKDLASWEAN--KYLIDACERFDVTCPPPKTTARLLEKLVGHFLEGT 401

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                 T +   P   S LA  + ++   T+RFEL+    ELCNA  EL DP+EQR RF 
Sbjct: 402 CV--NPTFIMNQPKIMSPLAKCHRSNEFLTERFELFVNQHELCNAYTELNDPVEQRQRFA 459

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++++++   +E    DE F   L   +P + G  MG DRLVML+T + NI EV+  P  
Sbjct: 460 DQLKDRRYGDDEAM--DETFCTALEYGLPPTGGWGMGIDRLVMLLTDSQNIKEVLLFPTM 517

Query: 349 QSNQEE 354
           +   +E
Sbjct: 518 KPGLDE 523


>gi|294055084|ref|YP_003548742.1| lysyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614417|gb|ADE54572.1| lysyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 505

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 149/365 (40%), Gaps = 32/365 (8%)

Query: 1   MHQIPSQPWWNRD-------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D              +   R    +R  I   +R+Y  E  F E+++ 
Sbjct: 144 LRPLPEKWSGLKDDDKIYRQRYLDLIVNQESRNRFKQRADIIKEMRKYLWERDFQEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G     R F T     + +    Y++ + E   K++L  GE+++F     +RN 
Sbjct: 204 VLQGVAGGAA-ARPFMTHF---NALDCRFYMRIALELYLKRMLVGGEDRVFEIGRVFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE Y+A+  +  +M+    +I+  AE     +   +            
Sbjct: 260 GLSRRHNPEFTMLELYQAYTDFRGMMELTQGLIQHVAEKVIGTLKIERPDGQVI-----D 314

Query: 168 ITVAEAFARYANIDLGTTLD-NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
           +      A+Y ++ +  T D       R +   +A+  GI V  +    +I   +  + I
Sbjct: 315 LGGEWREAKYKDLIIEATKDPEWFSHTREVKLEKARALGIEVDGELEDYEITGNVFEKVI 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           EP   +   T +   P     LA I   D      FEL     E+  A  E  DPI Q+ 
Sbjct: 375 EPT--LIQPTFVTHIPRELCPLAKITQDDETTIDVFELCINGQEIAPAYSEQNDPIIQKK 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            F +++        E   +D DF+  L   MP + G+ +G DRL++L+TGA +I + I  
Sbjct: 433 MFLEQV------GEEVQDMDTDFITALEHGMPPAGGMGLGIDRLIILLTGAESIRDTILF 486

Query: 346 PFSQS 350
           P  + 
Sbjct: 487 PSLKP 491


>gi|296128502|ref|YP_003635752.1| lysyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296020317|gb|ADG73553.1| lysyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 495

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 86/367 (23%), Positives = 145/367 (39%), Gaps = 27/367 (7%)

Query: 1   MHQIPSQPWWNR---DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDS 46
           +  +P+         +   R+R             +  R+ +  S+RE F    ++E+++
Sbjct: 139 IRPLPNLYEGTEMSEEARVRQRYVDLIVRPGARDMVRLRSAVVRSVRENFWRRGYLELET 198

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             LQ  P      R F T +   +     LYL+ +PE   K+    G EK+F     +RN
Sbjct: 199 PMLQVRPEGAA-ARQFETHM---NAFDIDLYLRIAPELFLKRAAVGGVEKVFEINRNFRN 254

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                 H PEF MLE Y A+  Y+ +     ++++ AA  A               +  +
Sbjct: 255 EGVDSTHSPEFAMLEAYEAYGDYDTMAALTQDLVQTAALDALGTTVV----TLADGTGYD 310

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEK 225
                 +   Y ++                L    + A I +A        +   +    
Sbjct: 311 LGGQWASLTMYGSLSEALGEQITHDTPDARLLELLEAAEIELAPSQRNHGKLVEELWEHH 370

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +     +   T +  +P   S L   +  +    ++++LY   +EL  A  EL+DP+ QR
Sbjct: 371 VGST--LWAPTFVRDFPVETSPLTRDHRTEKGLVEKWDLYVRGMELATAYSELVDPVVQR 428

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            RFE +     K  +E   IDEDFLA +   MP S G+ MG DRL++ +TG   I + I 
Sbjct: 429 ERFEAQAVLAAKGDDEAMRIDEDFLAAMEHAMPPSGGMGMGIDRLLIAMTGQG-IRDTIA 487

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 488 FPLVKPQ 494


>gi|269986979|gb|EEZ93255.1| lysyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 477

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 173/368 (47%), Gaps = 34/368 (9%)

Query: 1   MHQIPSQPWWNRDF--HYRRR--PFLLKR---------NMIQSSLREYFVENQFIEIDSM 47
           +  +PS+ +   D    YR+R   F++ R         N+I S +RE   +N++IE+   
Sbjct: 130 LLPMPSRWYGLEDTEKRYRKRYLDFIINRESLEKIKKGNIILSKIREIMEKNKYIEVIVP 189

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG   + + F T     + + +  YL+ + E   K++L  G E++F  +  +RN 
Sbjct: 190 ILQPIPGGA-NAKPFITHY---NSLDRDFYLKIASERYLKRMLVGGFERVFDISKNFRNE 245

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEF M+E Y+A+     +++    I++ +   AN+             S+ + 
Sbjct: 246 GVDTRHNPEFMMMEAYQAYGDLSSMLQLTEEIVKESVYAANKTYQVKFGEKMIDLSKFQI 305

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            T+ E       I            D   +  + +Q   +V    ++ +  + +   KI 
Sbjct: 306 KTMEEMVKDNLGI-----------SDEVEIIKRGKQIDSKVN---SYGEAVNAVFEAKIS 351

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            N  I     + ++P   S LA    +DPRF  RFELY   +E+ NA  EL DPI+Q  R
Sbjct: 352 DN--IVNPVFVTKFPIEVSPLAKKIESDPRFVYRFELYIAGMEIANAFSELNDPIDQISR 409

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE+E + K +  +ET   D+DF+  +   MP + G+ +G DRL M+ T + +I EVI  P
Sbjct: 410 FEEEAKRKNRGIDETQEFDKDFIESMGYGMPPAGGVGIGIDRLQMIGTDSKSIKEVIPFP 469

Query: 347 FSQSNQEE 354
             ++ +E+
Sbjct: 470 QLRTFEEQ 477


>gi|197287392|ref|YP_002153264.1| lysyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227358368|ref|ZP_03842708.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|238693187|sp|B4EWY8|SYK3_PROMH RecName: Full=Uncharacterized protein YjeA
 gi|194684879|emb|CAR47023.1| putative lysyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227161404|gb|EEI46448.1| lysyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 325

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 168/345 (48%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLK+  I S++R +F +   +E+++  +  +   + H+  F T+ +  
Sbjct: 7   WQPSASI---ANLLKKAKIVSNIRRFFADRGVLEVETPMMSQATVTDIHLCPFETQFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LYL TSPE+  K+LLAA    I+     +RN E G  H PEFTMLEWYR    
Sbjct: 64  GASQGLKLYLMTSPEYHMKRLLAANSGPIYQMGRCFRNEEAGRYHNPEFTMLEWYRPCFD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +    +                 ++  +AF RY +ID       
Sbjct: 124 MYRLMNEVDDLLQEVLDCEASES----------------LSYQQAFLRYLDID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   + +  +EP++G+   T +  +PA ++
Sbjct: 161 PLSADKEKLREVAAKLDLSNIADTEENRDTLLQLLFVSGVEPHIGLEKPTFIYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   +EL N   EL D  EQR RFE++ +++  +     PID
Sbjct: 221 SLAEISSEDHRVAERFEVYFKGVELANGFRELTDAKEQRLRFERDNRQRVAMGLPEQPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E FLA L   +P+ SG+A+G DRL+ML  G   I++VI  P  ++
Sbjct: 281 ERFLAALEAGLPECSGVALGVDRLIMLALGVERISDVIAFPVYRA 325


>gi|197106131|ref|YP_002131508.1| asparaginyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|196479551|gb|ACG79079.1| asparaginyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 334

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 177/344 (51%), Positives = 223/344 (64%), Gaps = 11/344 (3%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +    WW+ + H  RRPFL  R  I  ++R +F    F E+++  LQ SPGNE H+ AF+
Sbjct: 1   MTPSLWWSPERHADRRPFLTGRGAITRAVRAWFEGQGFSEVETAGLQVSPGNEAHLHAFA 60

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           T+ +      + LYL TSPEF+CKKLLAAGE +IF     WRN E+G LH PEFTMLEWY
Sbjct: 61  TQALTTAGEARTLYLHTSPEFACKKLLAAGETQIFSLGKVWRNRERGPLHHPEFTMLEWY 120

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           R   +YE LM DC  ++R AAE      F ++   C+PF+EPE +TVA+AF R+A IDL 
Sbjct: 121 RTGATYEVLMDDCAALLRLAAEATGTTAFDWRGGRCDPFAEPERLTVAQAFERHAGIDLF 180

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                        L  QA+ AG+RVA DD W+D+FSRI++EK+EPNLG    TIL  YP 
Sbjct: 181 GD-----------LAAQARAAGMRVARDDVWADVFSRIIVEKVEPNLGFGRPTILCEYPV 229

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
            E+ALA    ADPR  +RFELYAC +EL N   EL DP EQR RFE EM EK+++Y ETY
Sbjct: 230 SEAALARPKAADPRVAERFELYACGVELANCFGELTDPAEQRRRFEAEMAEKQRVYGETY 289

Query: 304 PIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           PIDE+ L  L  MP +SG A+GFDRL ML TGA +I +V+W P 
Sbjct: 290 PIDEELLDALAIMPAASGGALGFDRLAMLATGARHIEDVLWAPV 333


>gi|70605917|ref|YP_254787.1| lysyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363439|sp|Q4JCI5|SYK_SULAC RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|68566565|gb|AAY79494.1| lysyl-tRNA synthetase type II [Sulfolobus acidocaldarius DSM 639]
          Length = 500

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 84/339 (24%), Positives = 147/339 (43%), Gaps = 19/339 (5%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R  +  R      +RE+     F+E+++  LQ   G     + F + +   +++ +  YL
Sbjct: 170 RRNMEIRYSTIRRIREFLYSKGFMEVETPILQPVYGGA-LAKPFMSHV---NYLNENWYL 225

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + S E   K+ +  G  K+F     +RN +    H PEFT+LE Y A+  Y  +M+    
Sbjct: 226 RISLELYLKRYIVGGFNKVFEIGKVFRNEDIDVTHNPEFTLLELYWAYADYNDIMRLTEE 285

Query: 139 IIRCAAEVANQ----KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
           +++   +  N     K           FS+   IT+ ++       D+    D       
Sbjct: 286 MLQDVVKNINNDSKIKYSIGGKEYTIEFSQFRKITMIDSLTEVLGKDVDKMSD------- 338

Query: 195 HLLYLQAQQAGIRVAHDDTWSDI-FSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
             L     + G++   +     +   ++  + + P   +   T +  YP   + L   + 
Sbjct: 339 EELKSLMDKNGLKPRGNMYIRGLMIEKLFDKLVTPT--LIQPTFVLDYPVETTPLCKPHR 396

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           +     +RFELY   +EL NA  EL DPI Q   F++E +  K+   E +P D DF+  L
Sbjct: 397 SKQGLVERFELYVAGMELANAYTELNDPIIQDMLFKQEQEMFKRGDEEAHPYDVDFVRAL 456

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
              MP + G+ +G DRL+ML+T   +I E+I  P   + 
Sbjct: 457 SYGMPPTGGLGIGIDRLIMLLTNNMSIKEIIPYPMLSAK 495


>gi|226329418|ref|ZP_03804936.1| hypothetical protein PROPEN_03323 [Proteus penneri ATCC 35198]
 gi|225202604|gb|EEG84958.1| hypothetical protein PROPEN_03323 [Proteus penneri ATCC 35198]
          Length = 325

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 169/345 (48%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLK+  I S++R +F +   +E+++  +  +   + H+  F T+ +  
Sbjct: 7   WQPSASI---ANLLKKAKIISNIRRFFTDRGVLEVETPMMSQATVTDVHLYPFETQFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LYL TSPE+  K+LLAA    I+     +RN E G  H PEFTMLEWYR    
Sbjct: 64  GASQGLKLYLMTSPEYHMKRLLAANSGPIYQMGRCFRNEEAGRYHNPEFTMLEWYRPCFD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +    +                 ++  +AF RY +ID       
Sbjct: 124 MYRLMNEVDDLLQEVLDCEASES----------------LSYQQAFLRYLDID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSD--IFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D       +   + +  +EP++G+   T +  +PA ++
Sbjct: 161 PLSVDKEKLREVAAKLDLSNIADTEEDKDTLLQLLFVSGVEPHIGLEKPTFIYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   +EL N   EL D  EQRHRFE++ +++  +     PID
Sbjct: 221 SLAEISSEDHRVAERFEVYFKGVELANGFRELTDAQEQRHRFERDNRQRVAMGLPEQPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E FLA L   +P+ SG+A+G DRL+ML  G  ++++VI  P  ++
Sbjct: 281 ERFLAALEAGLPECSGVALGVDRLIMLALGVEHLSDVIAFPVYRA 325


>gi|312194051|ref|YP_004014112.1| lysyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311225387|gb|ADP78242.1| lysyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 488

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 82/364 (22%), Positives = 149/364 (40%), Gaps = 29/364 (7%)

Query: 2   HQIPSQPWWNRDF--HYRRRPFLLKRNMIQSSLR------------EYFVENQFIEIDSM 47
             +P +     D    YRRR   L  N      R             +  +  F+E+++ 
Sbjct: 120 RALPDKWHGIADVETRYRRRYLDLLANPASRE-RFQTRSRVISRIRRFLDDADFLEVETP 178

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  +       R F T     + + +  YL+ SPE   K+++A   ++++     +RN 
Sbjct: 179 VLTEAASGAA-ARPFITR---HNALGEDFYLRISPETYLKRVVAGSFDRVYEIGRNFRNE 234

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H  EFTMLEWY A+  Y   M+    +I    +     +  +++    +  ++  
Sbjct: 235 GIDPSHLQEFTMLEWYAAYWDYRDNMRFVRELILAILDDVIGSRTVTYEGTKLDFGADWP 294

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            I   +A      +DL          D   L  +    G+ V+   +++ +   +  + +
Sbjct: 295 VIDYRDAVESRTGVDLRVVR------DFETLKTKCADLGLDVSKAASYAALVDLLYKKTV 348

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
            P   +     L  +P     LA     DP     F++ A   EL  A  EL+DP++QR 
Sbjct: 349 RPE--LVQPCFLVGHPVELVPLARRSDDDPTRLDMFQVVANGWELVKAYSELVDPVDQRE 406

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R E++   +    +ET  ++EDF+  +   MP  SG+ +G DR + L+T A  + +V+  
Sbjct: 407 RLEEQADLRAAGDDETMMLEEDFIEAMEYGMPPMSGLGLGIDRFIALITDAPTLRDVVLF 466

Query: 346 PFSQ 349
           P  +
Sbjct: 467 PSMR 470


>gi|325108690|ref|YP_004269758.1| Lysyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324968958|gb|ADY59736.1| Lysyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 500

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 150/365 (41%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           + Q P +    +D     R+R             +L+R+ I  S+R+      ++E ++ 
Sbjct: 139 LAQPPEKFHGAKDIEMLLRQRSIDLIYNDGVLDRMLQRSKIIDSVRQTLRGQNYVEAETP 198

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+LL  G EK++     +RN 
Sbjct: 199 VLHAVAGGAA-ARPFITH---HNALDIELYLRIALELHLKRLLVGGVEKVYELGRVFRNE 254

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E Y+A+ +YE +M     I+  A +  +  +            + + 
Sbjct: 255 GIDATHNPEFTMIEIYQAYGNYETMMDLTEAIVTEAVQSIHDSLIVPWGE----GEDADT 310

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I     + R    DL       D  D   +   A   G+          + + +    +E
Sbjct: 311 IDFTAPWPRKKYADLFRDAAGCDMSDTDAVIALADSKGLE-TKGKHRDVVVNELFELLVE 369

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            N  +     +  YPA    L      DP   +RFELY   +EL NA  EL DP  Q   
Sbjct: 370 DN--LTGPVFVIDYPASICPLTKRKQDDPNIAERFELYVKGMELANAYTELNDPKLQEEL 427

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  ++    +  +    +D DF+  L   MP + G+ +G DRLVML+T + +I +VI+ P
Sbjct: 428 FLTQLDGLSEEDSMA-KMDTDFVKALKVGMPPAGGLGIGIDRLVMLLTNSRSIRDVIYFP 486

Query: 347 FSQSN 351
             +  
Sbjct: 487 LLKPE 491


>gi|257487124|ref|ZP_05641165.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 288

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 12/297 (4%)

Query: 57  THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
              + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN      H PE
Sbjct: 1   AAAKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNPE 57

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           FTMLE+Y+A+  YE  M     + R  A+ V       + +   +       ++V ++  
Sbjct: 58  FTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFVRLSVFDSIL 117

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
           +Y        L   D  D       A++AG +V   +    +   I  E +E    +   
Sbjct: 118 KY-----NPDLTAADLQDVDKARAIAKKAGAKVLGFEGLGKLQVMIFEELVEHK--LEQP 170

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
             + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  RF+ ++ +K
Sbjct: 171 HFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADK 230

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
               +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  P  +  
Sbjct: 231 DAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMRPQ 287


>gi|296392865|ref|YP_003657749.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296180012|gb|ADG96918.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 503

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 75/365 (20%), Positives = 136/365 (37%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P       +                 R     R  +   +R       F+E+++  
Sbjct: 146 LRPLPVAHKELSEEAQVRQRYLDLIMRPEARSVARTRVAVLREMRCALERRGFLEVETPI 205

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G  +  R F       + +    YL+ +PE   K+ L  G +++F     +RN  
Sbjct: 206 LQTIQGGAS-ARPFIAHS---NALDIDFYLRIAPELFLKRCLVGGLDRVFEINRNFRNEG 261

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFTMLE Y A+ +Y+ +      +++  A                     +  
Sbjct: 262 IDATHSPEFTMLEAYEAYGTYDTVAALTRELVQEVAHAVFGSTELVLADGSVY----DVG 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI--RVAHDDTWSDIFSRILIEKI 226
                   Y ++      +   Q     L   A +AG+     +      +   +    +
Sbjct: 318 GDWAVLEMYPSLSDALGTEVDPQTRVGRLRELALKAGLAEEKINSLGHGKLVEELWEHLV 377

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             +  +   T +  +PA  S L   + +     ++++LY    EL     EL+DP+ QR 
Sbjct: 378 GDH--LRAPTFVRHFPAETSPLTRQHRSIDGVVEKWDLYVRGFELATGYSELVDPVVQRE 435

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RF+ +   +     E  P+DEDFLA +   MP + G+ +G DRL+   TG   I + +  
Sbjct: 436 RFQAQALLRSSGDGEAMPLDEDFLAAMEHGMPPAGGLGLGVDRLMTAFTGLG-IRDTVLF 494

Query: 346 PFSQS 350
           P ++ 
Sbjct: 495 PITRP 499


>gi|296121103|ref|YP_003628881.1| lysyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296013443|gb|ADG66682.1| lysyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 487

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 89/369 (24%), Positives = 154/369 (41%), Gaps = 33/369 (8%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           + Q P +    +D     R+R             +L+R  I  S+R+     +F E+++ 
Sbjct: 136 LSQPPEKWHGLQDIETLLRQRYLDLIYNDGVLARMLRRLKIIDSIRQTLRGEEFFEVETP 195

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +  PLYL+ + E   K+L+  G E+++     +RN 
Sbjct: 196 VLHAIAGGAA-ARPFITH---HNALDIPLYLRIALELHLKRLMVGGIERVYEIGRVFRNE 251

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA--NQKIFSFQNVNCNPFSEP 165
                H PEFTM+E Y+A+  Y  +M+    II  A + A   + +  + +   +     
Sbjct: 252 GVDATHNPEFTMIELYQAYADYNIMMELAEKIISEACKAANDGKTVVEWGDKTLDFTPPF 311

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           +     + F ++A  D+          D   +   A++  I          I + +    
Sbjct: 312 QRAKYGDLFLKHAGCDMH---------DAAAVAEVARKLHIP-TEGRHHDVIVNDVFEAT 361

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E +  +     +  YP+    L       P   +RFEL+   +EL NA  EL DP  Q 
Sbjct: 362 VEDH--LEGPVFVIDYPSSMCPLTKRKNGQPEIAERFELFIHGLELANAYTELNDPRLQE 419

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F+ ++    +  +    +D DF+  L   MP + G+ +G DRLVML+T    I +VI+
Sbjct: 420 DLFKTQLAGLAEEDSMA-KMDHDFVRALKVGMPCAGGMGIGIDRLVMLLTNTKTIRDVIF 478

Query: 345 TPFSQSNQE 353
            P  +   E
Sbjct: 479 FPLLKPEVE 487


>gi|312901060|ref|ZP_07760349.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|311291806|gb|EFQ70362.1| lysyl-tRNA synthetase [Enterococcus faecalis TX0470]
          Length = 467

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 88/333 (26%), Positives = 145/333 (43%), Gaps = 27/333 (8%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N ++E+++ 
Sbjct: 147 LRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDRFMKRSQIISEIRRYLDGNGYVEVETP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LYL+ + E   K+L+  G EK++     +RN 
Sbjct: 207 VLHNEAGGAA-ARPFITH---HNALDMDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE Y A+  Y+ +M     IIR AA +V      ++     +  S  +
Sbjct: 263 GIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAEKVLGTTDITYDGQAVDLGSPFK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            + + +A      +D    +              A++  + +    T   I +      +
Sbjct: 323 RLHMVDAVKEQTGVDFWQEMTI------EEARALAKEHNVEITDAMTVGHIINEFFETFV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E    +   T +  +P   S LA   P D RFT RFEL+    E  NA  EL DPI+QR 
Sbjct: 377 EDT--LQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFANAFTELNDPIDQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           RFE++ +E+++  +E + +DEDF+  L   +P 
Sbjct: 435 RFEEQEKEREQGNDEAHGVDEDFIEALEYGLPP 467


>gi|331213317|ref|XP_003319340.1| lysyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309298330|gb|EFP74921.1| lysyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 563

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 78/378 (20%), Positives = 140/378 (37%), Gaps = 67/378 (17%)

Query: 1   MHQIP-------------SQPWWNRDFHYRRR-------------PFLLKRNMIQSSLRE 34
           +HQ+P                +  +D   R R                + R  + + +R 
Sbjct: 219 LHQLPRAETTITTEAGTTESKFGFKDQEQRHRKRYLDLIMNKEVRDVFITRARVINHVRR 278

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +  +  F+E+++  +    G  T  + F T     + +   L+L+ +PE   K+L+  G 
Sbjct: 279 FLDDLGFLEVETPMMNMIAGGAT-AKPFITH---HNSLGLDLFLRIAPELYLKELVVGGL 334

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFS 153
           ++++     +RN      H PEF++ E+Y A+     LM+    ++       N      
Sbjct: 335 DRVYEIGRVFRNESIDLTHNPEFSICEFYMAYADMYDLMQLTEAMLSGLVHKLNNGSYKI 394

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
             +       +   +  +  + R+  I+                    +Q  ++      
Sbjct: 395 KYHPEGPNSEKVYELDFSPPWKRFNMIE-----------------ELEKQLKVKFPTGK- 436

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
                     EKI   L   C       PA            PR   R         + N
Sbjct: 437 -----DFEDKEKITKFLDDLCVKHNVDCPA------------PRTNSRLLDKLVGEYIEN 479

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              EL DP +QR RFE++ ++K    +E   IDE F+  L   +P + G  +G DRLVML
Sbjct: 480 QYTELNDPFDQRERFEEQTRQKAAGDDEAQGIDETFIDALEHGLPPTGGWGLGIDRLVML 539

Query: 333 VTGANNINEVIWTPFSQS 350
           +T +N+I EV+  P ++ 
Sbjct: 540 LTDSNSIKEVLCFPANKP 557


>gi|75675834|ref|YP_318255.1| tRNA synthetase, class II (D, K and N) [Nitrobacter winogradskyi
           Nb-255]
 gi|74420704|gb|ABA04903.1| tRNA synthetase, class II (D, K and N) [Nitrobacter winogradskyi
           Nb-255]
          Length = 347

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 168/340 (49%), Positives = 224/340 (65%), Gaps = 2/340 (0%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
             WW++  H  R PFL  R+ +  +LR +F    F+E+++  LQ SPGNETH+ A  T L
Sbjct: 5   SSWWDQSRHADRMPFLKARSAVTRALRAWFDAQGFVEVETGVLQVSPGNETHLHAPRTTL 64

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                     YL+TSPEF+CKKLLAAGE+KI  FA  +R+ E+G LH PEFTMLEWYRA 
Sbjct: 65  TTAAGDHLTRYLRTSPEFACKKLLAAGEQKIVEFARVFRDRERGVLHLPEFTMLEWYRAG 124

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
            SYE +M DC+ +I  AA       FSF+    +P +EPE +TV  AF R+A IDL  T+
Sbjct: 125 GSYEAVMADCITVIANAARATGIPRFSFRGRQADPLAEPERLTVTAAFERFAGIDLLNTI 184

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
              +  DR  L   A++  +R+  DDTWSDIFS++L+E +EP+LG    T+L  YPAPE+
Sbjct: 185 VGREG-DRTALAEAARER-VRITDDDTWSDIFSKVLVEHVEPHLGQGRLTVLSDYPAPEA 242

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P+D R  +RFE+YAC +EL N   EL D  EQR RF + M +K+  Y E YP+D
Sbjct: 243 ALARISPSDSRVAERFEIYACGVELANGFGELTDAAEQRIRFAQAMDDKQIRYGERYPLD 302

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           EDFLA +  MP++ G+A+G DRLVML +GA+ I++V+WTP
Sbjct: 303 EDFLAAVARMPEAGGVALGLDRLVMLASGASRIDQVVWTP 342


>gi|300176701|emb|CBK24366.2| Lysyl-tRNA synthetase [Blastocystis hominis]
          Length = 512

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 90/366 (24%), Positives = 151/366 (41%), Gaps = 27/366 (7%)

Query: 5   PSQPW--WNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY 51
           P +     + D  YR+R                R+ I   +R +     F+++++  L  
Sbjct: 158 PREWHELKDPDVKYRKRYLDLLISQHTRQVFYTRSKIIQLIRSFLTAEGFLDVETSILSG 217

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
             G       F T    Q+   + L L+ SPE + K+L+  G +++F     +RN     
Sbjct: 218 LAGGAV-ATPFVTRSQSQN---RDLALRISPELALKELVVGGLDRVFEMGKVFRNEGLDS 273

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP-EYITV 170
            H  EFT +E Y A   Y   M+    ++       NQ      +     F+ P   I V
Sbjct: 274 KHNFEFTSVEAYMAFHDYTDWMRLTEKLLHHVCVEVNQADSLMVDGTQISFAPPYRRIDV 333

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            E   R          D   +     L    ++  ++V    T   +   ++   IEP  
Sbjct: 334 QEELERILG----PLPDLNSENSIPELLAICEKQQVKVNPPVTLPRVLDALIGRFIEPQC 389

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                T +  +PA  S L+ +  A    ++RFEL+   +E+ NA  E  DP++Q   F K
Sbjct: 390 V--QPTFIMNHPAVMSPLSKVNEAT-GKSERFELFVNGVEIVNAYTEQNDPVKQEMSFAK 446

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           + +++     E  P D  FL  L   +P ++G  MG DRLVML+T  ++I +VI+ P  +
Sbjct: 447 QGEQRAIGDKEIPPADLTFLNALEYGLPPTAGWGMGVDRLVMLMTNQSSIRDVIFFPVLK 506

Query: 350 -SNQEE 354
            +  +E
Sbjct: 507 EAEAKE 512


>gi|221639910|ref|YP_002526172.1| Lysine--tRNA ligase [Rhodobacter sphaeroides KD131]
 gi|221160691|gb|ACM01671.1| Lysine--tRNA ligase [Rhodobacter sphaeroides KD131]
          Length = 328

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 184/326 (56%), Positives = 224/326 (68%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
            LL RN IQS++R + +   F E+D  +LQ SPGNE H+  F+TE I  D   + +YL T
Sbjct: 1   MLLARNRIQSAIRGWLMAQGFTEVDPAALQVSPGNEAHLHGFATEAIGNDGQGRRMYLHT 60

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF+ KKLLAAGE +I  F+H WRN E+G LH PEFTMLEWYR  E YE LM DC   +
Sbjct: 61  SPEFAMKKLLAAGETRIAAFSHVWRNRERGVLHSPEFTMLEWYRVGEGYEVLMADCAAFL 120

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           R AAE A  +   F++  C+PF+ PE ++VAEAFAR+A IDL  T+D    PD   L   
Sbjct: 121 RLAAEAAGARELRFRDRTCDPFAAPERLSVAEAFARHAGIDLLATVDAQGLPDAEALRRA 180

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
             QAG+ V  DD WSD+ SR+L+EK+EP+LG    TILDRYPA E+ALA   P D R  +
Sbjct: 181 MAQAGLTVGADDGWSDMLSRVLVEKVEPHLGHGRPTILDRYPAAEAALARRAPDDARVAE 240

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELYAC +EL N   EL DP EQR RFE EM EK+++Y ETYP+DE+FL  L  MP +S
Sbjct: 241 RFELYACGVELANGFGELTDPAEQRRRFEAEMAEKERVYGETYPLDEEFLEALAFMPPAS 300

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIAMGFDRLVML TGA  I+EVIW P
Sbjct: 301 GIAMGFDRLVMLATGAPRIDEVIWAP 326


>gi|254292406|ref|YP_003058429.1| lysine--tRNA ligase [Hirschia baltica ATCC 49814]
 gi|254040937|gb|ACT57732.1| Lysine--tRNA ligase [Hirschia baltica ATCC 49814]
          Length = 343

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 169/345 (48%), Positives = 225/345 (65%), Gaps = 6/345 (1%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +   PWW+   H  RRPFLL RN ++S+LR +F   +F+E++  +LQ SPGNETH+ AFS
Sbjct: 1   MSDTPWWDAKRHADRRPFLLARNKVRSALRNWFENEEFLEVECGALQISPGNETHLHAFS 60

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           ++ + +D    + L+L TSPEFSCKKLLAAGE KI  FA  +RN E G LH PEFTM+EW
Sbjct: 61  SKFLDEDGSTNQELFLHTSPEFSCKKLLAAGETKIVDFARVYRNRESGPLHSPEFTMIEW 120

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR   S + +MKD  N+ R A          ++N +C+P  EPE++T+ +AF+RYA+IDL
Sbjct: 121 YRTGASLKDVMKDTANLARLALNATQATQMMWKNSSCDPHKEPEFLTLTDAFSRYADIDL 180

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L+     D       A +AG+ V+    W+DIFS +L+ KIE  LGI+  T L  YP
Sbjct: 181 NAVLE-----DTPAFKAAAAKAGVSVSDGAEWTDIFSAVLVSKIEDKLGIDRLTFLYNYP 235

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
             E+ALA     DPRF +RFE+YAC +EL N   EL DPIEQR RFE +M  K   Y E 
Sbjct: 236 ICEAALARPCRDDPRFAERFEMYACGVELANGFGELTDPIEQRKRFEADMILKLAYYGEN 295

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           YP+DE+ LA L  +P +SG+A+GFDRLVML + A  I++V+WTPF
Sbjct: 296 YPLDEELLAALPHIPDASGVALGFDRLVMLCSNARRIDDVLWTPF 340


>gi|331009251|gb|EGH89307.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 287

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 82/296 (27%), Positives = 133/296 (44%), Gaps = 12/296 (4%)

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN      H PEF
Sbjct: 1   AAKPFETH---HNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNPEF 57

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           TMLE+Y+A+  YE  M     + R  A+ V       + +   +       ++V ++  +
Sbjct: 58  TMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFVRLSVFDSILK 117

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           Y        L   D  D       A++AG +V   +    +   I  E +E    +    
Sbjct: 118 Y-----NPDLTAADLQDVDKARAIAKKAGAKVLGFEGLGKLQVMIFEELVEHK--LEQPH 170

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            + +YP   S LA     +P  T RFEL+    E+ NA  EL D  +Q  RF+ ++ +K 
Sbjct: 171 FITQYPFEVSPLARRNDENPSVTDRFELFIGGREIANAYSELNDAEDQAERFQAQVADKD 230

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
              +E    D DF+  L   MP ++G  +G DRLVML+T + +I +VI  P  +  
Sbjct: 231 AGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVMLLTDSPSIRDVILFPHMRPQ 286


>gi|118619355|ref|YP_907687.1| lysyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118571465|gb|ABL06216.1| lysyl-tRNA synthetase 1 LysS [Mycobacterium ulcerans Agy99]
          Length = 498

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 143/364 (39%), Gaps = 25/364 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               +R  +  ++R       F+E+++  
Sbjct: 143 LRPLPVAHKEMSEESRVRQRYVDLIVRPQAREVARQRIAVIRAVRNALERRGFLEVETPM 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 203 LQTLAGGAA-ARPFVTHS---NALDIDLYLRIAPELFLKRCIVGGFDRVFELNRVFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF+MLE Y+ + +Y+        +I+  A+ A                + E+ 
Sbjct: 259 SDSTHSPEFSMLETYQTYGTYDDSALITRELIQEVADEAIGTRQLSMPDGSVYDIDGEWA 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIE 227
           T+      Y+++          +     L   A    + + +       +   +    + 
Sbjct: 319 TM----EMYSSLSEALGEQITPETTVARLRDIASGLDVEIDNSVFGHGKLVEELWEHAVG 374

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   + L   + + P  T++++LY   +EL     EL DP+ QR R
Sbjct: 375 NK--LTAPTFVKDFPVETTPLTRQHRSIPGVTEKWDLYVRGVELATGYSELNDPVVQRDR 432

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  + +      +E   +DEDFL  L   MP  +G  MG DRL+M +TG  +I E +  P
Sbjct: 433 FADQARAAAAGDDEAMQLDEDFLTALEYGMPPCTGTGMGIDRLLMCLTGL-SIRETVLFP 491

Query: 347 FSQS 350
             + 
Sbjct: 492 IVRP 495


>gi|183985070|ref|YP_001853361.1| lysyl-tRNA synthetase 1 LysS [Mycobacterium marinum M]
 gi|183178396|gb|ACC43506.1| lysyl-tRNA synthetase 1 LysS [Mycobacterium marinum M]
          Length = 498

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 143/364 (39%), Gaps = 25/364 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               +R  +  ++R       F+E+++  
Sbjct: 143 LRPLPVAHKEMSEESRVRQRYVDLIVRPQAREVARQRIAVIRAVRNALERRGFLEVETPM 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 203 LQTLAGGAA-ARPFVTHS---NALDIDLYLRIAPELFLKRCIVGGFDRVFELNRVFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF+MLE Y+ + +Y+        +I+  A+ A                + E+ 
Sbjct: 259 SDSTHSPEFSMLETYQTYGTYDDSALITRELIQEVADEAIGTRQLPMPDGSVYDIDGEWA 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIE 227
           T+      Y+++          +     L   A    + + +       +   +    + 
Sbjct: 319 TI----EMYSSLSEALGEQITPETTVARLRDIASGLDVEIDNSVFGHGKLVEELWEHAVG 374

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   + L   + + P  T++++LY   +EL     EL DP+ QR R
Sbjct: 375 NK--LTAPTFVKDFPVETTPLTRQHRSIPGVTEKWDLYVRGVELATGYSELNDPVVQRDR 432

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F  + +      +E   +DEDFL  L   MP  +G  MG DRL+M +TG  +I E +  P
Sbjct: 433 FADQARAAAAGDDEAMQLDEDFLTALEYGMPPCTGTGMGIDRLLMCLTGL-SIRETVLFP 491

Query: 347 FSQS 350
             + 
Sbjct: 492 IVRP 495


>gi|149176428|ref|ZP_01855042.1| lysyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148844780|gb|EDL59129.1| lysyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 493

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 160/368 (43%), Gaps = 31/368 (8%)

Query: 1   MHQIPSQPWWNRDFHY--RRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           + Q P +    +D     R+R             +LKR+ I  S+R+     +F E+++ 
Sbjct: 137 LAQPPEKHHSVKDVELLLRQRSLDLIYTEGVLEKMLKRSQIIDSVRQTLRNQKFAEVETP 196

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     R F T     + +   LY++ + E   K+L+  G E+++     +RN 
Sbjct: 197 VLHAVAGGAA-ARPFITH---HNTLDIELYMRIALELHLKRLMVGGIERVYEIGRVFRNE 252

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTM+E Y+A+  YE +M     I+  A +  +  +         P+ E E 
Sbjct: 253 GIDATHNPEFTMIEIYQAYGDYETMMDLTEAIVTDAVKTISDTM-------ELPWGEGET 305

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I  +  + R   +DL       D  D   +   A+Q GI    +     + + +     E
Sbjct: 306 IDFSGPWERKKYLDLVREHAGCDPADPAAVAAVAKQHGIE-TENVHPDVVLNEVFEATCE 364

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +  +     +  YPA    L      DP   +RFEL+   +EL NA  EL DP+ Q   
Sbjct: 365 AH--LTGPVFVIDYPASICPLTKRKQDDPNIAERFELFVKGMELANAYTELNDPLLQEEL 422

Query: 288 FEKEMQEKKKIYNETY-PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           F+ ++        ++   +D DF+  L   MP + G+ +G DRLVML+T +++I +VI+ 
Sbjct: 423 FQTQLSGLS--DEDSMAKMDTDFIKALKVGMPPAGGLGIGIDRLVMLLTNSHSIRDVIYF 480

Query: 346 PFSQSNQE 353
           P  +   +
Sbjct: 481 PLLRPEGQ 488


>gi|73956990|ref|XP_861414.1| PREDICTED: similar to Lysyl-tRNA synthetase (Lysine--tRNA ligase)
           (LysRS) isoform 4 [Canis familiaris]
          Length = 557

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 142/376 (37%), Gaps = 68/376 (18%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI   
Sbjct: 210 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEI--- 266

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
                                                    L+  G ++++     +RN 
Sbjct: 267 -----------------------------------------LVVGGIDRVYEIGRQFRNE 285

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    +I    +          +           
Sbjct: 286 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMISGMVKHITGSYKVTYHPDGPEGEAYEI 345

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 346 DFTPPFRRISMVEELEKALGVKLPETKLFETEETRKILDDICLARAVECPPPRTTARLLD 405

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           +++ E +E        T +  +P   S LA  + +    T+RFEL+    E+CNA  EL 
Sbjct: 406 KLVGEFLETTC--INPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELN 463

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           DP+ QR  FE++ + K    +E   IDE+F   L   +P ++G  MG DR+ M +T +NN
Sbjct: 464 DPVRQRQLFEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNN 523

Query: 339 INEVIWTPFSQSNQEE 354
           I EV+  P  +   ++
Sbjct: 524 IKEVLLFPAMKPEDKK 539


>gi|255513954|gb|EET90219.1| lysyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 485

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 83/365 (22%), Positives = 150/365 (41%), Gaps = 29/365 (7%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R            F + R  I   +R++     + E ++ 
Sbjct: 127 LKSMPEKFHGLNDVEIRYRKRYLDLIANPEVRNFFITRAKILKYMRDFLDSRGYTEFETP 186

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G   +   F T     + I   +YL+ S E   K+L+  G EK++  +  +RN 
Sbjct: 187 VLQPAYGGA-NATPFVTHY---NAIDSDVYLRISDELYLKRLIIGGFEKVYEVSKDFRNE 242

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
           +    H PEFT +E Y A++ Y   M+    ++      +        +    +     +
Sbjct: 243 DMDSTHNPEFTQIEAYEAYKDYNDYMEMTEELLGGMVKHIFGSHKIEHRGRELDFTPPFK 302

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +   E   + + ID+    D+  +        Q ++  I + +    +D      I   
Sbjct: 303 KLYWVEELKKRSGIDVSRITDSESKE-----ISQKEKLDIPIKNAYHVADALFDKYI--- 354

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +PA    L      +   ++RFELY   +E+ N   EL DPIEQ+ 
Sbjct: 355 --KPELFNPTFVVDFPAYMCPLTKDKRGNKLLSERFELYIAGVEVANCYSELTDPIEQKA 412

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +FE++  E+K    E  P D DF+  +   MP ++GI +  DR   ++T   +I E+I  
Sbjct: 413 KFEEQESERKHGDTEAPPSDADFIDAIEYGMPPTAGIGISIDRPAAILTNNISIKEIIPF 472

Query: 346 PFSQS 350
           P  + 
Sbjct: 473 PAERP 477


>gi|229819217|ref|YP_002880743.1| lysyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|229565130|gb|ACQ78981.1| lysyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 503

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 83/366 (22%), Positives = 151/366 (41%), Gaps = 25/366 (6%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPF-LLKRNMIQSS----------LREYFVENQFIEIDSMS 48
           +  +P+       +   RRR   L+ R   +            LR  F E  F+E+++  
Sbjct: 148 LRPLPTLHAGTSEETRVRRRYLDLIARPAARDVVRVRAEVVRALRAAFHERDFVEVETPM 207

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ  PG     R F T +   +     LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 208 LQTQPGGAA-ARPFVTHM---NAYDIDLYLRIAPELFLKQAVVGGIDRVFEINRNFRNEG 263

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y A+  Y+ + +    +++ +A  A         V      + +  
Sbjct: 264 ADSSHSPEFAMLEAYEAYSDYDGMARLTQELVQSSARAALGST----TVTLADGEQFDVG 319

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIE 227
               + + Y ++     L+   +     L   A++  + +     +   +   I    + 
Sbjct: 320 GEWPSISLYGSLSEALGLEVTPETPLDELLRLAEKHELEIDLATASHGKVVEEIWEHLVR 379

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P+  ++  T +  +P   S L   +       ++++LY   +E+     EL+DP+EQR R
Sbjct: 380 PS--LHTPTFVRDFPLDTSPLVRAHRDRAGVVEKWDLYIRGVEIATGYSELIDPVEQRAR 437

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE +         E   +DE+FL  +   +P   G+ MG DRL+M +TG   + E I  P
Sbjct: 438 FEAQALLAAAGDPEAMRVDEEFLEAMEHALPPLGGMGMGIDRLLMALTGLG-VRETILFP 496

Query: 347 FSQSNQ 352
             +  +
Sbjct: 497 LVKPRE 502


>gi|327311312|ref|YP_004338209.1| lysyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947791|gb|AEA12897.1| lysyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 481

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 90/338 (26%), Positives = 144/338 (42%), Gaps = 20/338 (5%)

Query: 13  DFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
           D   R R  +  R  +  + RE F    F+EI +  LQ   G     R F+T +     I
Sbjct: 155 DIQLRWR--IYTRARLIQAFREAFWRRGFVEIPTPVLQPIYGGAA-ARPFTTHIW---AI 208

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +  YL+ SPE   K+ + AG  ++F     +RN +   LH PEF  LE Y+A+  Y  +
Sbjct: 209 DEDWYLRISPELYLKRYIIAGFSRVFEIGPQFRNEDIDALHNPEFWSLEAYQAYADYNDM 268

Query: 133 MKDCMN-IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           M+                 +  +     N       IT+ +A   +  +D     D+  +
Sbjct: 269 MRLMEETTYEALQAALGTAVVKYGESTINFSPPWRRITLYDALREFGGVDPDKLTDDEIK 328

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                L +  +                 ++  + +E    +   T +  YP   + L   
Sbjct: 329 DRLRALQVPLKAYN--------RGIALVKLFEKLVEKK--LVQPTFVYDYPEESTPLCKP 378

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
           +   P   +RFE +A   EL NA  EL DP++Q   F++E +   K  +E +P+D DF+ 
Sbjct: 379 HREKPGLVERFEAFAGGHELANAYTELNDPVKQYEFFKREEELFPK--DEAHPLDYDFVE 436

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            L+  MP + GI +G DRL M+ TGA +I +VI  P  
Sbjct: 437 DLSFGMPPTGGIGIGIDRLAMIATGAESIKDVIPFPIV 474


>gi|160880706|ref|YP_001559674.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160429372|gb|ABX42935.1| lysyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 489

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 81/368 (22%), Positives = 149/368 (40%), Gaps = 32/368 (8%)

Query: 3   QIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     ++D  YR+R              L +  +   +R Y  ++ ++E+++  L
Sbjct: 131 PLPEKFHGITDKDSCYRQRYLDLIMNEDTRNRFLLKFQMIKEIRRYLEDSGYLEVETPVL 190

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              P   T  R F +     + +   + L+ +PE   K+ +  G  K+F FA  +RN   
Sbjct: 191 NDKPSGAT-ARPFISH---HNALDMEVNLRIAPETYLKRCIVGGIPKVFEFARCFRNEGM 246

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYI 168
              H  +FTMLE Y A+ +Y   MK    ++    +      +    + + +   E   +
Sbjct: 247 DATHLQDFTMLEGYCAYYNYTDNMKFLQTMLATVIKKVFGSSLIKVGSQSIDFSGEWRVV 306

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW-----SDIFSRILI 223
           T  E   +   ID+    +     D+       ++ GI +  +         ++   +  
Sbjct: 307 TFRELLIKDCGIDINAYSNTESLLDK------IKEEGIELHSETPIEQLSKGNLIDLLYK 360

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           +   P   I   T L  +P   S LA     +     RF+L     E+ NA  EL+DP+E
Sbjct: 361 KVSRPK--IISPTFLTEHPTSLSPLARANDDNKEIVDRFQLIINGAEVINAYSELVDPVE 418

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ R  ++   K     E   +D D++  +   MP  SG  MG DR + ++TG  N+ + 
Sbjct: 419 QKKRLMEQALAKANGDEEAMTMDYDYITAMEYGMPPISGWGMGVDRFLQVITGQENLRDT 478

Query: 343 IWTPFSQS 350
           +  P  + 
Sbjct: 479 VLFPIMRP 486


>gi|222623269|gb|EEE57401.1| hypothetical protein OsJ_07579 [Oryza sativa Japonica Group]
          Length = 665

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 103/466 (22%), Positives = 167/466 (35%), Gaps = 120/466 (25%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R    S +R+      FIE+++ 
Sbjct: 206 LLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRTRAKAVSEIRKTMESFGFIEVETP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + +++ LYL+ + E   K++L  G EK++     +RN 
Sbjct: 266 VLQGAAGGA-EARPFITH---HNSLQRDLYLRIATELHLKRMLVGGLEKVYEIGRIFRNE 321

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK----------------- 150
                H PEFT +E Y A+  YE +M     I+   A   + K                 
Sbjct: 322 GISTRHNPEFTTIEMYEAYSDYESMMNLAEEIVTRCAMATHGKLRVDYQEYTVRSTQCEA 381

Query: 151 ---------------------------------IFSFQNVNCNPFSEPEYITVAEAFARY 177
                                              S+ +  C   +    I++   + R 
Sbjct: 382 SRPGVEMESATAKAIGRKKGVKTPPVPWLVLTDAISYGHCQCQWLAMGTEISLERPWRRE 441

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQA--GIRVAHDDTW--------SDIFSRILIEKIE 227
               L       D          A+ A  GI+   ++            + + +    +E
Sbjct: 442 TMHSLVKEATGIDFNSFGEDLESAKNAARGIKTESNENISLQACSSVGHVLNEVFETVVE 501

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ--- 284
            +  +   T +  YP   S LA  +      T+RFEL+ C  E+ NA  EL DPI+Q   
Sbjct: 502 SS--LVQPTFVLDYPVEISPLAKPHRRYAGLTERFELFICGREIGNAFSELTDPIDQLVF 559

Query: 285 ------------------RHRFEKEMQE-----------------KKKIYNETYP--IDE 307
                             R RFE ++++                 K +  + +Y   +DE
Sbjct: 560 GGFDKLEMQRPDLVNMQKRGRFENQIKQHNAKRAAMTKEVKSTEGKHEEDDFSYEVTLDE 619

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           DFL  L   MP +SG+ +G DRLVML+T + +I +VI  P  +  Q
Sbjct: 620 DFLTSLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKIQQ 665


>gi|183234212|ref|XP_650600.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|169801208|gb|EAL45214.2| hypothetical protein EHI_047810 [Entamoeba histolytica HM-1:IMSS]
          Length = 769

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 142/431 (32%), Gaps = 82/431 (19%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +PS  +   +++  +R+R              + R  +  ++R+Y  +  F+E+++ 
Sbjct: 138 LHMLPSMHYGLGDQETRFRKRYLDLIVNPESVKNFVLRTKVVKAVRKYLDDKGFLEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG  T  R F T     + +   +Y++ +PE   K+L+  G  +++     +RN 
Sbjct: 198 ILNTIPGGAT-ARPFITH---HNQLDIQMYMRIAPELYLKELVVGGINRVYEIGRLFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ---------------KIF 152
                H PEFT  E+Y A+  Y  +MK    ++    +                      
Sbjct: 254 GIDQTHNPEFTTCEFYMAYADYNDIMKMTEELLGNMVKDITGGSTKLEIKDRLMDINNEE 313

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ------AQQAGI 206
             + +             +   ++             D  +   +          ++  +
Sbjct: 314 DIKMLEKFFKEPIPRPFNSAECSKVIEKHCTELNYYYDGNNEKAMKKLFADFVTEKKMVL 373

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
                         +  +  E             +   ++   N   A+P+ T R     
Sbjct: 374 DFTAPFKRISYVHALEEKFGEKIPRPLDGPEALTFLKKQAIRFNAICAEPQTTARVMDKL 433

Query: 267 CNI-------------------------------------------ELCNACDELLDPIE 283
                                                         E+ NA  EL +PI 
Sbjct: 434 FGDLIEVDLVQPTFVCDQPQLMSPLAKYHRSEPELTERFELFILKREIANAYTELNNPIV 493

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSGIAMGFDRLVMLVTGANNINEV 342
           QR  FE++ ++K    +E   +DE FL  +    P + G  +G DRL ML+   +NI EV
Sbjct: 494 QRSNFEQQAKDKAAGDDEAQLVDEVFLDAIEHAFPPTGGWGLGIDRLAMLLADVDNIKEV 553

Query: 343 IWTPFSQSNQE 353
           I  P  +   E
Sbjct: 554 ILFPTMRPEDE 564


>gi|145222020|ref|YP_001132698.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315446240|ref|YP_004079119.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1]
 gi|254782477|sp|A4T5M9|SYK_MYCGI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|145214506|gb|ABP43910.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315264543|gb|ADU01285.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1]
          Length = 501

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 81/364 (22%), Positives = 147/364 (40%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               +R  +  ++R       F+E+++  
Sbjct: 145 LRPLPVAHKELNEETRVRQRYVDLIVRPEARTIARQRIAVVRAVRSALERRGFLEVETPM 204

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 205 LQTLAGGAA-ARPFVTHS---NALDADLYLRIAPELFLKRCVVGGFDRVFELNRNFRNEG 260

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+ +Y+        +I+        +    + V     +E +  
Sbjct: 261 ADSTHSPEFAMLETYQAYGTYDDSATVTRELIQE----VADEAIGTRQVPLADGTEYDLD 316

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKI 226
              ++   Y ++      +         L+  A + G+ +  D       +   +    +
Sbjct: 317 GEWQSLQMYPSLSEALGEEITPATPAEKLWQIADRLGVEIPRDRGYGHGKLVEELWEFTV 376

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +P   + L   + +    T++++LY    EL     EL+DPI QR 
Sbjct: 377 GDT--LWAPTFVRDFPVETTPLTRPHRSIEGVTEKWDLYVRKFELATGYSELIDPIIQRE 434

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +      +E   +DEDFLA L   MP ++G  MG DRL+M +TG  +I E +  
Sbjct: 435 RFEAQARAAAAGDDEAMALDEDFLAALEYGMPPTTGTGMGIDRLLMALTGL-SIRETVLF 493

Query: 346 PFSQ 349
           P  +
Sbjct: 494 PIVR 497


>gi|218191199|gb|EEC73626.1| hypothetical protein OsI_08130 [Oryza sativa Indica Group]
          Length = 603

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 103/466 (22%), Positives = 167/466 (35%), Gaps = 120/466 (25%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R  + S +R+      FIE+++ 
Sbjct: 144 LLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRTRAKVVSEIRKTMESFGFIEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ + G     R F T     + +++ LYL+ + E   K++L  G EK++     +RN 
Sbjct: 204 VLQGAAGGA-EARPFITH---HNSLQRDLYLRIATELHLKRMLVGGLEKVYEIGRIFRNE 259

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK----------------- 150
                H PEFT +E Y A+  YE +M     I+   A   + K                 
Sbjct: 260 GISTRHNPEFTTIEMYEAYSDYESMMNLAEEIVTRCAMATHGKLRVDYQEYTVRSTQCEA 319

Query: 151 ---------------------------------IFSFQNVNCNPFSEPEYITVAEAFARY 177
                                              S+ +  C   +    I +   + R 
Sbjct: 320 SRPGVAMESATAKAIGRKKGVKTPPVPWLVLTDAISYGHCQCQWLAMGTEICLERPWRRE 379

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQA--GIRVAHDDTW--------SDIFSRILIEKIE 227
               L       D          A+ A  GI+   ++            + + +    +E
Sbjct: 380 TMHSLVKEATGIDFNSFGEDLESAKNAARGIKTESNENISLQACSSVGHVLNEVFETVVE 439

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ--- 284
            +  +   T +  YP   S LA  +      T+RFEL+ C  E+ NA  EL DPI+Q   
Sbjct: 440 SS--LVQPTFVLDYPVEISPLAKPHRRYAGLTERFELFICGREIGNAFSELTDPIDQLVF 497

Query: 285 ------------------RHRFEKEMQE-----------------KKKIYNETYP--IDE 307
                             R RFE ++++                 K +  + +Y   +DE
Sbjct: 498 GGFDKLEMQRPDLVNMQKRGRFENQIKQHNAKRAAMTKEVKSTEGKHEEDDFSYEVTLDE 557

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           DFL  L   MP +SG+ +G DRLVML+T + +I +VI  P  +  Q
Sbjct: 558 DFLTSLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKIQQ 603


>gi|215405648|ref|ZP_03417829.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215413522|ref|ZP_03422194.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|289747435|ref|ZP_06506813.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis 02_1987]
 gi|294993718|ref|ZP_06799409.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|298527077|ref|ZP_07014486.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis 94_M4241A]
 gi|289687963|gb|EFD55451.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis 02_1987]
 gi|298496871|gb|EFI32165.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis 94_M4241A]
 gi|326905437|gb|EGE52370.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis W-148]
          Length = 505

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 83/369 (22%), Positives = 145/369 (39%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P       +                 R     R  +  ++R       F+E+++  
Sbjct: 145 LRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPV 204

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T     + +   LYL+ +PE   K+ +  G +K+F     +RN  
Sbjct: 205 LQTLAGGAA-ARPFATHS---NALDIDLYLRIAPELFLKRCIVGGFDKVFELNRVFRNEG 260

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF+MLE Y+ + +Y+        +I+  A+ A                + E+ 
Sbjct: 261 ADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLPDGSVYDIDGEWA 320

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH------DDTWSDIFSRIL 222
           T+      Y ++ +    +   Q     L   A   G+                +   + 
Sbjct: 321 TIQ----MYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELW 376

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +  +  ++  T +  +P   + L   + + P  T++++LY   IEL     EL DP+
Sbjct: 377 ERTVGKS--LSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYSELSDPV 434

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
            QR RF  + +      +ET  +DEDFLA L   MP  +G  MG DRL+M +TG  +I E
Sbjct: 435 VQRERFADQARAAAAGDDETMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTGL-SIRE 493

Query: 342 VIWTPFSQS 350
            +  P  + 
Sbjct: 494 TVLFPIVRP 502


>gi|150018414|ref|YP_001310668.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149904879|gb|ABR35712.1| lysyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 508

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 87/365 (23%), Positives = 158/365 (43%), Gaps = 22/365 (6%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D   R+R                +KR+   +++REY     FIE D+ 
Sbjct: 149 IRTLPEKYHGIQDSDLRQRHRSLDMIMNSDVKERFIKRSKAITAIREYLNNMNFIECDTP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +   +Y+  SPE   K+L+  G E+++ FA ++RN 
Sbjct: 209 VLDTKYGGG-EAKPFKT---FVNDLDCEVYMNVSPELYLKRLIVGGIERVYTFARSFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFT++E Y ++  YE +M+    I               +     +  +  +
Sbjct: 265 GIDRTHYPEFTLMECYMSYADYEDMMRIMEGIYEHVFMSVNGSTKIKYGEEEIDFKAPWK 324

Query: 167 YITVAEAFARYANIDLGT-TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             T+     +   ID+   T +      +    L  +Q      ++ +  ++ + +    
Sbjct: 325 RETMCNLVKQDTGIDVENLTKEEIISKIKENSLLIEEQNEGLNINEASKGELITNLFEAY 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L  ++  +P   +RFE YA  +EL NA  EL DP+ QR
Sbjct: 385 SEKK--LIQPTFVIDFPKESSPLCKVHRENPDLIERFEPYAYGVELGNAYSELNDPLRQR 442

Query: 286 HRFEKEMQEKKKIYNETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
                + ++ +       P+DE+F +A  T MP + G+ +G DR++M +TG+N I +VI 
Sbjct: 443 ILLHDQAEKLRGGLETASPMDEEFAIAIDTAMPPTGGLGIGIDRMIMFLTGSNTIKDVIA 502

Query: 345 TPFSQ 349
            P  +
Sbjct: 503 FPLVK 507


>gi|323345803|gb|EGA80172.1| Krs1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 376

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 71/347 (20%), Positives = 135/347 (38%), Gaps = 30/347 (8%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I   +R +  + +FIE+++ 
Sbjct: 35  LHMLPADHFGFKDQETRYRKRYLDLIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETP 94

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  T  + F T     + +   +Y++ +PE   K+L+  G ++++     +RN 
Sbjct: 95  MMNVIAGGAT-AKPFITH---HNDLDMDMYMRIAPELFLKQLVVGGLDRVYEIGRQFRNE 150

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV---------N 158
                H PEFT  E+Y+A+     LM     +     +          +           
Sbjct: 151 GIDMTHNPEFTTCEFYQAYADVYDLMDMTELMFSEMVKEITGSYIIKYHPDPADPAKELE 210

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N     + I + E   +  N+   +            L        +      T + + 
Sbjct: 211 LNFSRPWKRINMIEELEKVFNVKFPSGDQLHTAETGEFLKKILVDNKLECPPPLTNARML 270

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
            +++    E        T +  +P   S LA      P   +RFE++    E+CNA  EL
Sbjct: 271 DKLVG---ELEDTCINPTFIFGHPQMMSPLAKYSRDQPGLCERFEVFVATKEICNAYTEL 327

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
            DP +QR RFE++ ++K +  +E   +DE F   L   +P + G  +
Sbjct: 328 NDPFDQRARFEEQARQKDQGDDEAQLVDETFCNALEYGLPPTGGWGL 374


>gi|305662675|ref|YP_003858963.1| lysyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304377244|gb|ADM27083.1| lysyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 516

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 95/374 (25%), Positives = 165/374 (44%), Gaps = 40/374 (10%)

Query: 5   PSQPWW--NRDFHYRRRPFLLK-----RNMIQS------SLREYFVENQFIEIDSMSLQY 51
           P +     + +  YR R   +      RN I S      + R++     FIEI +  LQ 
Sbjct: 135 PEKWHGIVDSEKRYRLRYLDIMLNEKVRNAIISTYKIEKAFRDFLDSRGFIEIHTPKLQP 194

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
             G     R F T++     + K LYL  +PE   K+ + A   K++  A  +RN +   
Sbjct: 195 IYGGA-LARPFITKM---YALDKTLYLSIAPETYLKRAVVANLFKVYEIAVCFRNEDIDA 250

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF------SFQNVNCNPFSEP 165
            H PEF  +E Y+A   +  +M+   N+I  A +             + + V  +     
Sbjct: 251 QHYPEFVQIEIYQAFADWNDMMELVENMIAYAVKQTFGDYKIEVLRDTGERVELDFKPPW 310

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             I++ ++   ++ I +          +   L   A+   I +  D     I  +I  + 
Sbjct: 311 RRISLEDSIEIFSGIKIKN-------KEYDELIEIARSLDISI-DDPRRGKIIEKIFEKV 362

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +EP   +   T +  YP   S LA  Y  DPR+++RFE++   +E+ N   EL +P+ Q 
Sbjct: 363 VEPK--LLQPTYITLYPRDISPLARPYREDPRYSERFEIFLMGLEIGNGYSELNNPVVQY 420

Query: 286 HRFEKE----MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           + F+KE     + + K   E +P+D+D++  L   MP ++G+ +G  RLVM + G ++I 
Sbjct: 421 YFFKKEEDLRSRARAKEDLEYHPMDKDYVRALEYGMPPTAGVGIGIYRLVMQLLGLSSIK 480

Query: 341 EVIWTPFSQSNQEE 354
           +VI        Q+E
Sbjct: 481 DVIPFTIV--EQDE 492


>gi|15827030|ref|NP_301293.1| lysyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229508|ref|YP_002502924.1| lysyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13432212|sp|P46861|SYK_MYCLE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|13092577|emb|CAC29741.1| putative lysyl-tRNA synthase [Mycobacterium leprae]
 gi|219932615|emb|CAR70326.1| putative lysyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 507

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 83/369 (22%), Positives = 148/369 (40%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPFLLK-----------RNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R   L            R  +  ++R       F+E+++  
Sbjct: 147 LRPLPVAHKEMSEESRVRQRYVDLIVCPQVRIVAHQRIAVIRAIRTALERRGFLEVETPM 206

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +K+F     +RN  
Sbjct: 207 LQTLAGGAA-ARPFVTHS---NALDIDLYLRIAPELFLKRCIVGGFDKVFELNRVFRNEG 262

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF+MLE Y+ + +Y+        II+  A+ A          +     + E  
Sbjct: 263 ADSTHSPEFSMLETYQTYGTYDDSAVVTREIIQEVADEAIGTRQLQMPDDSVYDIDGE-- 320

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD------DTWSDIFSRIL 222
              E    Y ++      +   Q     L   A + G  +  +           +  ++ 
Sbjct: 321 --WETIQMYPSLSAVLGEEITPQTSVDRLRAIADRLGRGIGPEILDKPSYGHGRLVEQLW 378

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +     ++  T +  +P   + L   + + P  T++++LY   +EL     EL DP+
Sbjct: 379 EYTVGNT--LSAPTFVKDFPVETTPLTRQHRSIPGVTEKWDLYLRGVELATGYSELNDPV 436

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
            QR RF ++++      +E   +DE+FLA L   MP  +G  MG DRL+M +TG  +I E
Sbjct: 437 VQRERFGQQVRAAAAEEDEAMALDEEFLAALEYAMPPCTGTGMGIDRLLMSLTGL-SIRE 495

Query: 342 VIWTPFSQS 350
            +  P  + 
Sbjct: 496 TVLFPIVRP 504


>gi|209885153|ref|YP_002289010.1| putative lysyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873349|gb|ACI93145.1| putative lysyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 346

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 166/347 (47%), Positives = 228/347 (65%), Gaps = 5/347 (1%)

Query: 3   QIPSQ--PWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
            +PS+  PWW+R+ H  R+PFL +R  I  ++R++F    F+E+++  LQ SPGNETH+ 
Sbjct: 2   MVPSKASPWWDRERHQDRQPFLRQRAAITRTVRDWFAAEGFVEVETGILQVSPGNETHLH 61

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           A   E +     +  LY++TSPEF+CKKLLAAGEE+I  FA  +R  E   LH  EFTML
Sbjct: 62  ALRAEGLGGSG-QTSLYMRTSPEFACKKLLAAGEERIVEFAKVFRGREDSPLHLTEFTML 120

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           EWYRA   Y  +  DC  ++  AAE A  + F+F+    +PF+ PE +TVAEAF R+A++
Sbjct: 121 EWYRAGAPYATITDDCAAVVARAAEAACTRRFAFRGKTLDPFAPPERLTVAEAFQRFASL 180

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL  T++  ++ +R  L   A     RV++DD WSDIFS++L E +EP LG    TIL  
Sbjct: 181 DLLATVEG-NRGNRDALAAMAASI-TRVSNDDDWSDIFSKVLTEHVEPKLGEGRLTILFD 238

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP+PE+ALA   P D R  +RFE+Y C +EL N   EL D  EQR RF   M EK++ Y 
Sbjct: 239 YPSPEAALARTSPQDARVAERFEVYGCGVELANGFGELNDAAEQRRRFAGAMDEKERRYG 298

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E YP+DEDFLA L +MP++SG+A+GFDRLVML +GA  +++V+W P 
Sbjct: 299 ERYPLDEDFLAALAQMPEASGVALGFDRLVMLASGATRLDQVVWAPL 345


>gi|240172842|ref|ZP_04751501.1| lysyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 499

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 143/365 (39%), Gaps = 26/365 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRRPFL-----------LKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               +R  +  ++R       F+E+++  
Sbjct: 143 LRPLPVAHKEMSEEARVRQRYVDLIVRPQARGVARQRIAVIRAIRNALERRGFVEVETPM 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ +  G +++F     +RN  
Sbjct: 203 LQTLAGGAA-ARPFVTHS---NALDMDLYLRIAPELFLKRCIVGGFDRVFELNRVFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF+MLE Y+ + +Y+        +I+  A+ A                + E+ 
Sbjct: 259 ADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPMPDGSVYDIDGEWA 318

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKI 226
           T+      Y+++      +   Q     L   A++    +          +   +    +
Sbjct: 319 TIH----MYSSLSAALGEEITPQTSVDRLREIARRLDEEILDKGGYRHGKLVEELWEHTV 374

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +P   + L   + +    T++++LY   +EL     EL DP+ QR 
Sbjct: 375 GNT--LTAPTFVKDFPVETTPLTRQHRSIAGVTEKWDLYLHGVELATGYSELNDPVVQRD 432

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R   + +      +E   +DEDFLA L   MP  +G  MG DRL+M +TG  +I E +  
Sbjct: 433 RLADQARAAAAGDDEAMLLDEDFLAALEYGMPPCTGTGMGIDRLLMALTGL-SIRETVLF 491

Query: 346 PFSQS 350
           P  + 
Sbjct: 492 PIVRP 496


>gi|271502186|ref|YP_003335212.1| lysyl-tRNA synthetase-like protein GenX [Dickeya dadantii Ech586]
 gi|270345741|gb|ACZ78506.1| lysyl-tRNA synthetase-related protein GenX [Dickeya dadantii
           Ech586]
          Length = 325

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 103/333 (30%), Positives = 165/333 (49%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYLQT 80
           LLKR  I   +R +F +   +E+++ ++  +   + H+  F T  +         LYL T
Sbjct: 16  LLKRASIMKEIRRFFSDRGVLEVETPAMSQATVTDVHLFPFQTHFVGPGAADGMALYLMT 75

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H    +LM +  +++
Sbjct: 76  SPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNPEFTMLEWYRPHYDMYRLMNEMDDLL 135

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   E  + ++                ++  +AF R+  +D       P   D+  L   
Sbjct: 136 QQVLECDSAEM----------------LSYQQAFQRHLEVD-------PLSADKAQLREA 172

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A++ G+      ++    +   +    +EP +G +    +  +PA ++ALA I   D R 
Sbjct: 173 AEKIGVGDVANREEDRDTLLQLLFAFGVEPQIGRDKPAFVYHFPATQAALAEISTEDHRV 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
            +RFE+Y   IEL N   EL D  EQR RFE++ +++        PIDE+ LA L   +P
Sbjct: 233 AERFEVYYKGIELANGFCELTDSKEQRQRFEQDNRKRAARGLPVQPIDENLLAALAAGIP 292

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             SG+A+G DRLVML   A +I EV+     ++
Sbjct: 293 PCSGVALGVDRLVMLALNAESIGEVMAFTVDRA 325


>gi|187779156|ref|ZP_02995629.1| hypothetical protein CLOSPO_02751 [Clostridium sporogenes ATCC
           15579]
 gi|187772781|gb|EDU36583.1| hypothetical protein CLOSPO_02751 [Clostridium sporogenes ATCC
           15579]
          Length = 506

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 87/365 (23%), Positives = 154/365 (42%), Gaps = 22/365 (6%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D   R+R                +KR+   +++REY     FIE D+ 
Sbjct: 147 IRTLPEKYHGIQDADLRQRHRSLDMIMNEGVKERFIKRSKAITAIREYLNNLNFIEADTP 206

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F+T     + +   +Y+  SPE   K+L+  G E+++ FA A+RN 
Sbjct: 207 ILDTKYGGG-EAKPFTT---FVNALDCNVYMNVSPELYLKRLIVGGIERVYTFARAFRNE 262

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEF++ E Y ++  Y  +MK   NI               + +V  +  +  +
Sbjct: 263 GIDRTHYPEFSLFECYMSYADYNDMMKLMENIYEYVFNKVNGTTKVQYGDVEIDFKAPWK 322

Query: 167 YITVAEAFARYANIDLGTTLDNPDQP-DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
              + +   +   ID+ T          +    L   Q    V  + +  ++   +    
Sbjct: 323 RAKMCDLVKKDTGIDVETFTREEIIKGIKDNELLIESQNEGLVIDECSKGELIVNLFEVY 382

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E    +   T +  +P   S L  I+  +    +RFE YA  +EL NA  EL DP++QR
Sbjct: 383 SEKK--LIQPTFVIDFPEESSPLCKIHRHNSDLIERFEPYAYGVELGNAYSELNDPLKQR 440

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
               ++  + +       P+DE+F   +   MP + G+ MG DR++M +TG+  I +VI 
Sbjct: 441 ILLHEQASKLRAGLETASPMDEEFAVAIDTAMPPTGGLGMGIDRMIMFLTGSYAIKDVIA 500

Query: 345 TPFSQ 349
            P  +
Sbjct: 501 FPLIK 505


>gi|85717362|ref|ZP_01048314.1| tRNA synthetase, class II (D, K and N) [Nitrobacter sp. Nb-311A]
 gi|85695837|gb|EAQ33743.1| tRNA synthetase, class II (D, K and N) [Nitrobacter sp. Nb-311A]
          Length = 347

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 171/348 (49%), Positives = 228/348 (65%), Gaps = 5/348 (1%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
            PWW++  H  RRPFL  R  +  +LR +F    F+E+++  LQ SPGNETH+ A  T L
Sbjct: 5   SPWWDQARHADRRPFLNARTAVTKALRAWFEAQGFVEVETGVLQVSPGNETHLHAPRTAL 64

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                 R   YL+TSPEF+CKKLLAAGE+KI  FA  +R+ E+G LH PEFTMLEWYRA 
Sbjct: 65  TTPAGNRVTRYLRTSPEFACKKLLAAGEQKIMEFARVFRDRERGVLHLPEFTMLEWYRAG 124

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
            +Y+ ++ DC+ +I  AA       FSF+    +P +EPE +TVA AF R+A IDL  T+
Sbjct: 125 SAYDVVIADCIAVIAVAARATAIPRFSFRGRQADPLAEPERLTVAAAFDRFAGIDLLNTV 184

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
              +  DR  L   A+   +R+  DDTWSDIFS++L+E IEP+LG    T+L  YPAPE+
Sbjct: 185 AGREG-DRAALAEAARGR-VRITDDDTWSDIFSKVLVEHIEPHLGQERLTVLYDYPAPEA 242

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P+D R  +RFE+YAC +EL N   EL D  EQR RF + M EK+  Y E YP+D
Sbjct: 243 ALARISPSDSRVAERFEVYACGVELANGFGELTDAAEQRIRFAQAMDEKQGRYGERYPLD 302

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
           EDFLA + +MP++ G+A+G DRLVML +GA  I++V+W P     ++E
Sbjct: 303 EDFLAAVAQMPEAGGVALGLDRLVMLASGALRIDQVVWMP---PAEDE 347


>gi|118471596|ref|YP_890315.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118172883|gb|ABK73779.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 507

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 82/364 (22%), Positives = 144/364 (39%), Gaps = 26/364 (7%)

Query: 1   MHQIPSQPWWN-RDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P        +   R+R               +R  +  ++R       F+E+++  
Sbjct: 151 LRPLPVAHKEMSEEARVRQRYVDLIVRPEARTIARQRVAVVRAVRSALERRGFLEVETPM 210

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F T     + +   LYL+ +PE   K+ L  G EK+F     +RN  
Sbjct: 211 LQTLAGGAA-ARPFITHS---NALDIDLYLRIAPELFLKRCLVGGFEKVFELNRNFRNEG 266

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF MLE Y+A+  Y         +I+        +    + V     +  +  
Sbjct: 267 VDSTHSPEFAMLETYQAYGDYNDSATVTRELIQE----VADEAIGTRQVPLPDGTVYDLD 322

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKI 226
              +    Y ++      +   +     L+  A +  + +  D       +   +    +
Sbjct: 323 GEWDTVEMYPSLSEALGDEITPETPVEKLWQIADRLEVEIPRDRGYGHGKLIEELWEHTV 382

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                +   T +  +P   + L   + + P  T++++LY    EL     EL+DP+ QR 
Sbjct: 383 GDK--LWAPTFVRDFPVETTPLTRAHRSIPGVTEKWDLYVRKFELATGYSELIDPVIQRE 440

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           RFE + +      +E   +DEDFLA L   MP ++G  MG DRL+M +TG  +I E +  
Sbjct: 441 RFEAQARAAAAGDDEAMVLDEDFLAALEFAMPPTTGTGMGIDRLMMALTGL-SIRETVLF 499

Query: 346 PFSQ 349
           P  +
Sbjct: 500 PIVR 503


>gi|307132775|ref|YP_003884791.1| putative lysyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306530304|gb|ADN00235.1| predicted lysyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 345

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 102/333 (30%), Positives = 166/333 (49%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYLQT 80
           LLKR  I   +R +F +   +E+++ ++  +   + H+  F T  +         LYL T
Sbjct: 36  LLKRASIMKEIRRFFSDRGVLEVETPAMSQATVTDVHLFPFQTHFVGPGAADGMALYLMT 95

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H    +LM +  +++
Sbjct: 96  SPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNPEFTMLEWYRPHYDMYRLMNEMDDLL 155

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   E  + ++                ++  +AF R+  +D       P   D+  L   
Sbjct: 156 QQVLECDSAEM----------------LSYQQAFQRHLEVD-------PLSADKAQLRDA 192

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A++ G+      ++    +   +    +EP++G +    +  +PA ++ALA I   D R 
Sbjct: 193 AEKIGVGDVAGREEDRDTLLQLLFAFGVEPHIGRDKPAFVYHFPATQAALAEISTEDHRV 252

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   IEL N   EL D  EQR RFE++ +++        PIDE+ LA L   +P
Sbjct: 253 AERFEVYYKGIELANGFCELTDSKEQRQRFEQDNRKRAARGLPVQPIDENLLAALEAGIP 312

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             SG+A+G DRLVM+   A +I EV+     ++
Sbjct: 313 PCSGVALGVDRLVMMALNAESIGEVMAFTVDRA 345


>gi|293393226|ref|ZP_06637541.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291424372|gb|EFE97586.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 364

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 170/362 (46%), Gaps = 38/362 (10%)

Query: 1   MHQI--------PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
           +H +             W           LLKR  I + +R +F +   +E+++ ++  +
Sbjct: 29  LHPLFDFGVITMSETASWQPSAPI---ANLLKRAAILAEIRRFFADRGVLEVETPAMSQA 85

Query: 53  PGNETHIRAFSTELIIQDHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
              + H+  F T  +         LY+ TSPE+  K+LLAAG   I+    A+RN E G 
Sbjct: 86  TVTDVHLFPFETRFVGPGAAEGMTLYMMTSPEYHMKRLLAAGSGPIYQMGRAFRNEEAGR 145

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H PEFTMLEWYR H    +LM +  ++++   +  + +                 ++  
Sbjct: 146 HHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCDSAET----------------LSYQ 189

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPN 229
           +AF R+ +ID       P   ++  L   A +  +    D  +    +   +    +EP+
Sbjct: 190 QAFLRHLDID-------PLSAEKAQLREAATKLDLGNIADTEEDRDTLLQLLFTVGVEPH 242

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
           +G      +  +PA ++ALA I   D R  +RFE+Y   +EL N   EL D  EQR RFE
Sbjct: 243 IGREKPAFVYHFPASQAALAEISTEDHRVAERFEVYFKGLELANGFRELTDGNEQRQRFE 302

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++ +++        PID + L  L   MP  +G+A+G DRLVML  GA +++EVI  P +
Sbjct: 303 QDNRKRAARGLPEQPIDHNLLDALRHGMPDCAGVALGVDRLVMLALGAESLSEVIAFPVT 362

Query: 349 QS 350
           ++
Sbjct: 363 RA 364


>gi|290473609|ref|YP_003466479.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Xenorhabdus bovienii SS-2004]
 gi|289172912|emb|CBJ79683.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Xenorhabdus bovienii SS-2004]
          Length = 325

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 101/341 (29%), Positives = 162/341 (47%), Gaps = 30/341 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRAKILAEIRRFFADRGVLEVETPTMGQATITDIHLVPFQTRFVGP 63

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LYL TSPE+  K+LL AG   I+    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGLTLYLMTSPEYHMKRLLTAGSGSIYQMGRSFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   E  + +                 ++  + F RY  ID       
Sbjct: 124 MYRLMNEVDDLLQQILECESAES----------------LSYQQVFIRYLEID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P    +  L   A +  +    D  +    +   +    +E ++G+   T +  +PA ++
Sbjct: 161 PLTASKEKLREVAAKLDLSNIADQEEDRDTLLQLLFTMGVETHIGLEKPTFIYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   +EL N   EL D  EQR RF ++ ++++ +     PID
Sbjct: 221 SLAEISKEDHRVAERFEVYFKGMELANGFRELTDSHEQRLRFVQDNRKREAMGLPVMPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E  L  L   MP+ +G+A+G DRL+ML  GA  I+EVI  P
Sbjct: 281 ERLLKALEHGMPECAGVALGVDRLIMLALGAERISEVIAFP 321


>gi|316934334|ref|YP_004109316.1| lysyl-tRNA synthetase-like protein GenX [Rhodopseudomonas palustris
           DX-1]
 gi|315602048|gb|ADU44583.1| lysyl-tRNA synthetase-related protein GenX [Rhodopseudomonas
           palustris DX-1]
          Length = 364

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 174/340 (51%), Positives = 228/340 (67%), Gaps = 2/340 (0%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
            PWWNRD +  R+PFL  R  +  S+R +F    F E+++  LQ SPGNETH+ A  TEL
Sbjct: 21  SPWWNRDRYLDRQPFLRARGAVTRSVRAWFETAGFTEVETAILQISPGNETHLHAPRTEL 80

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
           +  D  R+  YL+TSPEF+CKKLLAAGE +IF  A  +R+ E+G +H PEFTMLEWYRA 
Sbjct: 81  LGPDGERRSRYLRTSPEFACKKLLAAGETRIFELARVFRDRERGRVHLPEFTMLEWYRAE 140

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
             Y+Q++ DC+ ++R AA       FSF+    +P +EPE +TVA AFAR+A IDL  T+
Sbjct: 141 APYQQVIDDCVALVRVAAGATGIDRFSFRGRRADPQAEPECLTVAGAFARFAGIDLLATI 200

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
            + +     L    A +  +R+  DDTWSDIFS++L+E +EP LG    T+L  YPAPE+
Sbjct: 201 IDGEGDRAALANAAAAR--VRIVDDDTWSDIFSKVLVEHVEPRLGDGRLTVLSEYPAPEA 258

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA   P DPR  +RFELYAC +EL N   EL D  EQR RF   M EK++ Y E YP+D
Sbjct: 259 ALARTKPDDPRVAERFELYACGVELANGFGELTDAGEQRARFVVAMDEKERRYGERYPLD 318

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E FLA + EMP++SG+A+GFDRLVML  GA  I++V+WTP
Sbjct: 319 EAFLAAVAEMPEASGVALGFDRLVMLAAGATTIDQVVWTP 358


>gi|322831143|ref|YP_004211170.1| lysyl-tRNA synthetase-related protein GenX [Rahnella sp. Y9602]
 gi|321166344|gb|ADW72043.1| lysyl-tRNA synthetase-related protein GenX [Rahnella sp. Y9602]
          Length = 325

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 99/333 (29%), Positives = 168/333 (50%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYLQT 80
           LLKR  I + +R +F +   +E+++ ++  +   + H+  F T  +         LYL T
Sbjct: 16  LLKRAAILAEIRRFFADRGVLEVETPAMSQATVTDIHLVPFETRFVGPGAADGMTLYLMT 75

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR      +LM +  +++
Sbjct: 76  SPEYHMKRLLAAGSGPIYQMGRSFRNEEAGRHHNPEFTMLEWYRPRYDMYRLMNEVDDLL 135

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   +  +                 E ++  +AF R+  +D       P   D+  L   
Sbjct: 136 QQVLDCDSA----------------ETLSYQQAFTRHLGVD-------PLSADKTELREA 172

Query: 201 AQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A +  +    D  +    +   +    +EP++G +  T +  +PA ++ALA I   D R 
Sbjct: 173 AAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGRDKPTFVYHFPATQAALAEISTEDHRV 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   IEL N   EL D  EQR RFE++ +++       +P+D + L  L   MP
Sbjct: 233 AERFEVYYKGIELANGFRELTDSREQRQRFEQDNRKRAARGLPQHPVDNNLLDALEHGMP 292

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + SG+A+G DRL+M+  GA ++++V+  P +++
Sbjct: 293 ECSGVALGVDRLIMIALGAASLSDVLAFPVTRA 325


>gi|15610734|ref|NP_218115.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|15843211|ref|NP_338248.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31794775|ref|NP_857268.1| lysyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121639518|ref|YP_979742.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663463|ref|YP_001284986.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148824804|ref|YP_001289558.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167968199|ref|ZP_02550476.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215432573|ref|ZP_03430492.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|219559674|ref|ZP_03538750.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224992015|ref|YP_002646704.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800639|ref|YP_003033640.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 1435]
 gi|254366156|ref|ZP_04982200.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|260202790|ref|ZP_05770281.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289555861|ref|ZP_06445071.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 605]
 gi|289571838|ref|ZP_06452065.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T17]
 gi|289572253|ref|ZP_06452480.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis K85]
 gi|289755726|ref|ZP_06515104.1| lysyl-tRNA synthetase 1 [Mycobacterium tuberculosis EAS054]
 gi|297636274|ref|ZP_06954054.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297733268|ref|ZP_06962386.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|306777954|ref|ZP_07416291.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu001]
 gi|306778485|ref|ZP_07416822.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu002]
 gi|306786506|ref|ZP_07424828.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu003]
 gi|306790872|ref|ZP_07429194.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu004]
 gi|306791195|ref|ZP_07429497.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu005]
 gi|306795980|ref|ZP_07434282.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu006]
 gi|306801226|ref|ZP_07437894.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu008]
 gi|306805440|ref|ZP_07442108.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu007]
 gi|306969731|ref|ZP_07482392.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu009]
 gi|306974072|ref|ZP_07486733.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu010]
 gi|307081780|ref|ZP_07490950.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu011]
 gi|307086396|ref|ZP_07495509.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu012]
 gi|313660598|ref|ZP_07817478.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039679|sp|P67608|SYK1_MYCBO RecName: Full=Lysyl-tRNA synthetase 1; AltName: Full=Lysine--tRNA
           ligase 1; Short=LysRS 1
 gi|54042300|sp|P67607|SYK1_MYCTU RecName: Full=Lysyl-tRNA synthetase 1; AltName: Full=Lysine--tRNA
           ligase 1; Short=LysRS 1
 gi|254782475|sp|A1KPT4|SYK_MYCBP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|254782476|sp|C1AI57|SYK_MYCBT RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|254782478|sp|A5U8S4|SYK_MYCTA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|2113978|emb|CAB08946.1| LYSYL-TRNA SYNTHETASE 1 LYSS (LYSINE--TRNA LIGASE 1) (LYSRS 1)
           (LYSINE TRANSLASE) [Mycobacterium tuberculosis H37Rv]
 gi|13883565|gb|AAK48062.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31620372|emb|CAD95815.1| LYSYL-TRNA SYNTHETASE 1 LYSS (LYSINE--TRNA LIGASE 1) (LYSRS 1)
           (LYSINE TRANSLASE) [Mycobacterium bovis AF2122/97]
 gi|121495166|emb|CAL73652.1| Lysyl-tRNA synthetase 1 lysS [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|134151668|gb|EBA43713.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507615|gb|ABQ75424.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148723331|gb|ABR07956.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis F11]
 gi|224775130|dbj|BAH27936.1| lysyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253322142|gb|ACT26745.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 1435]
 gi|289440493|gb|EFD22986.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 605]
 gi|289536684|gb|EFD41262.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis K85]
 gi|289545592|gb|EFD49240.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T17]
 gi|289696313|gb|EFD63742.1| lysyl-tRNA synthetase 1 [Mycobacterium tuberculosis EAS054]
 gi|308213726|gb|EFO73125.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu001]
 gi|308328479|gb|EFP17330.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu002]
 gi|308328893|gb|EFP17744.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu003]
 gi|308332731|gb|EFP21582.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu004]
 gi|308340224|gb|EFP29075.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu005]
 gi|308343546|gb|EFP32397.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu006]
 gi|308348013|gb|EFP36864.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu007]
 gi|308351954|gb|EFP40805.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu008]
 gi|308352740|gb|EFP41591.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu009]
 gi|308356589|gb|EFP45440.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu010]
 gi|308360546|gb|EFP49397.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu011]
 gi|308364162|gb|EFP53013.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis SUMu012]
 gi|323717707|gb|EGB26907.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis CDC1551A]
 gi|328460370|gb|AEB05793.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis KZN 4207]
          Length = 505

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 82/369 (22%), Positives = 144/369 (39%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P       +                 R     R  +  ++R       F+E+++  
Sbjct: 145 LRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPV 204

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T     + +   LYL+ +PE   K+ +  G +K+F     +RN  
Sbjct: 205 LQTLAGGAA-ARPFATHS---NALDIDLYLRIAPELFLKRCIVGGFDKVFELNRVFRNEG 260

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF+MLE Y+ + +Y+        +I+  A+ A                + E+ 
Sbjct: 261 ADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLPDGSVYDIDGEWA 320

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH------DDTWSDIFSRIL 222
           T+      Y ++ +    +   Q     L   A   G+                +   + 
Sbjct: 321 TIQ----MYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELW 376

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +  +  ++  T +  +P   + L   + + P  T++++LY   IEL     EL DP+
Sbjct: 377 ERTVGKS--LSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYSELSDPV 434

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
            QR RF  + +      +E   +DEDFLA L   MP  +G  MG DRL+M +TG  +I E
Sbjct: 435 VQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTGL-SIRE 493

Query: 342 VIWTPFSQS 350
            +  P  + 
Sbjct: 494 TVLFPIVRP 502


>gi|92117824|ref|YP_577553.1| lysine--tRNA ligase [Nitrobacter hamburgensis X14]
 gi|91800718|gb|ABE63093.1| Lysine--tRNA ligase [Nitrobacter hamburgensis X14]
          Length = 345

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 175/340 (51%), Positives = 231/340 (67%), Gaps = 4/340 (1%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
            PWW+R  H  RR FL  R  +  +LR +F    F+E+++  LQ SPGNETH+ A  T L
Sbjct: 5   SPWWDRARHADRRAFLQARVAVTRALRAWFDAQGFVEVETGVLQASPGNETHLHAPRTTL 64

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                 +   YL+TSPEF+CKKLLAAGE+K+  FA  +R+ E+G LH  EFTMLEWYRA 
Sbjct: 65  TSPAGDQVTRYLRTSPEFACKKLLAAGEQKVVEFARVFRDRERGDLHLAEFTMLEWYRAG 124

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
            SY+ +M DC+ +I  AA+      FSF+  + +PF+EPE +TVA AF R+A IDL  T+
Sbjct: 125 RSYDVIMADCIAVIARAAKATGIGAFSFRGRHADPFAEPELLTVAAAFDRFAGIDLLKTV 184

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
              +  DR  L  QA+   +R+A DDTWSDIFS++L+E +EP LG    TIL +YPAPE+
Sbjct: 185 VGGEG-DRAALAAQAR---VRIADDDTWSDIFSKVLVEHVEPRLGQGRLTILSKYPAPEA 240

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I PAD R  +RFE+YAC +EL N   EL D  EQR RF + M +K+  Y E YP+D
Sbjct: 241 ALARIDPADSRVAERFEIYACGVELANGFGELTDAAEQRIRFNRAMDDKQSRYGERYPLD 300

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           EDFLA + +MP++SG+A+GFDRLVML +GA  I++V+WTP
Sbjct: 301 EDFLAAVAQMPEASGVALGFDRLVMLASGALRIDQVVWTP 340


>gi|213855685|ref|ZP_03383925.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 486

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 81/323 (25%), Positives = 137/323 (42%), Gaps = 25/323 (7%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSKILAGIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y+ L++   ++ R  A+ V       + +   +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGTTQVPYGDEVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E +  +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQ 438

Query: 287 RFEKEMQEKKKIYNETYPIDEDF 309
           RF  ++  K    +E    DED+
Sbjct: 439 RFLDQVNAKAAGDDEAMFYDEDY 461


>gi|260184518|ref|ZP_05761992.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|289445193|ref|ZP_06434937.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis CPHL_A]
 gi|289418151|gb|EFD15352.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis CPHL_A]
          Length = 505

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 82/369 (22%), Positives = 144/369 (39%), Gaps = 30/369 (8%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P       +                 R     R  +  ++R       F+E+++  
Sbjct: 145 LRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPV 204

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T     + +   LYL+ +PE   K+ +  G +K+F     +RN  
Sbjct: 205 LQTLAGGAA-ARPFATHS---NALDIDLYLRIAPELFLKRCIVGGFDKVFELNRVFRNEG 260

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF+MLE Y+ + +Y+        +I+  A+ A                + E+ 
Sbjct: 261 ADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLPDGSVYDIDGEWA 320

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH------DDTWSDIFSRIL 222
           T+      Y ++ +    +   Q     L   A   G+                +   + 
Sbjct: 321 TIQ----MYPSLSVALGEEITPQTTVDRLRGLADSLGLEKDPAIHDNRGFGHGKLIEELW 376

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +  +  ++  T +  +P   + L   + + P  T++++LY   IEL     EL DP+
Sbjct: 377 ERTVGKS--LSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYSELSDPV 434

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
            QR RF  + +      +E   +DEDFLA L   MP  +G  MG DRL+M +TG  +I E
Sbjct: 435 VQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTGL-SIRE 493

Query: 342 VIWTPFSQS 350
            +  P  + 
Sbjct: 494 TVLFPIVRP 502


>gi|238764674|ref|ZP_04625618.1| lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238697070|gb|EEP89843.1| lysyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 332

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 100/354 (28%), Positives = 169/354 (47%), Gaps = 30/354 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           +  +     W           LLKR  I + +R +F +   +E+++ ++  +   + H+ 
Sbjct: 5   LTTMSETASWQPSAPI---ANLLKRAAIMAEIRRFFTDRGVLEVETPTMSQATVTDIHLV 61

Query: 61  AFSTELIIQDHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
            F T  +         LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTM
Sbjct: 62  PFETRFVGPGAADGLTLYMMTSPEYHMKRLLAAGSGSIYQMGRSFRNEEAGRHHNPEFTM 121

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           LEWYR H    +LM +  ++++   +  + +                 ++  +AF R+ +
Sbjct: 122 LEWYRPHYDMYRLMNEVDDLLQQILDCNSAET----------------LSYQQAFLRHLD 165

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTI 237
           ID       P   D+  L   A +  +    D  +    +   +    +EP++G      
Sbjct: 166 ID-------PLSADKAQLREAAAKLDLSNIADTEEDRDTLLQLLFTVGVEPHIGREKPAF 218

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  +PA +++LA I   D R  +RFE+Y   +EL N   EL D  EQ  RFE++ + ++K
Sbjct: 219 VYHFPASQASLAVISTEDHRVAERFEVYFKGMELANGFHELTDGDEQLKRFEQDNRSREK 278

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                +PID + +A L   +P  SG+A+G DRLVML  GA  +++VI  P  ++
Sbjct: 279 RGLPQHPIDMNLIAALKHGLPDCSGVALGVDRLVMLALGAERLSDVIAFPVDRA 332


>gi|237729093|ref|ZP_04559574.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226908822|gb|EEH94740.1| lysyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 325

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIIAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LL AG   ++    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGMNLYLMTSPEYHMKRLLVAGCGPVYQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   + +                  E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDCS----------------PAESLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G +  T +  
Sbjct: 161 ------PLSADKTQLREVAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKDKPTFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID + L  L   MP  SG+A+G DRLVML  GA ++ EVI     ++
Sbjct: 275 PQQPIDTNLLEALKVGMPDCSGVALGVDRLVMLALGAESLAEVIAFTVDRA 325


>gi|283834777|ref|ZP_06354518.1| lysyl-tRNA synthetase [Citrobacter youngae ATCC 29220]
 gi|291069023|gb|EFE07132.1| lysyl-tRNA synthetase [Citrobacter youngae ATCC 29220]
          Length = 325

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIIAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LL AG   ++    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGMNLYLMTSPEYHMKRLLVAGCGPVYQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   + +                  E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDCS----------------PAESLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G +  T +  
Sbjct: 161 ------PLSADKTQLREVAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKDKPTFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID + L  L   MP  SG+A+G DRLVML  GA ++ EVI     ++
Sbjct: 275 PQQPIDNNLLEALKVGMPDCSGVALGVDRLVMLALGAESLAEVIAFTVDRA 325


>gi|39935580|ref|NP_947856.1| putative lysyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|39649433|emb|CAE27955.1| putative lysyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 351

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 172/340 (50%), Positives = 228/340 (67%), Gaps = 2/340 (0%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
            PWWNRD +  R+PFL  R  +  ++R +F    F E+++  LQ SPGNETH+ A  TEL
Sbjct: 8   SPWWNRDRYLDRQPFLRARGGVTRAVRAWFEAAGFTEVETAILQISPGNETHLHAPRTEL 67

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
           +  D  R+  YL+TSPEF+CKKLLAAGE ++F  A  +R+ E+G +H PEFTMLEWYRA 
Sbjct: 68  LGPDGERRIRYLRTSPEFACKKLLAAGETRVFELARVFRDRERGRVHLPEFTMLEWYRAE 127

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
             Y+Q++ DC+ ++R AAE      FSF+    +P +EPE +TVA+AF R+A IDL  T+
Sbjct: 128 APYQQVIDDCVALVRVAAEATGIAAFSFKGRRADPQAEPERLTVADAFVRFAGIDLLATI 187

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
              +     L    A +   R+A DDTWSDIFS++L+E +EP LG    T+L  YPAPE+
Sbjct: 188 AKGEGDRTALANAAAARV--RIAEDDTWSDIFSKVLVEHVEPRLGDGRLTVLSEYPAPEA 245

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA   P DPR  +RFELYAC +EL N   EL +  EQR RF   M EK++ Y E YP+D
Sbjct: 246 ALARTKPDDPRVAERFELYACGVELANGFGELTNAAEQRERFMAAMDEKERRYGERYPLD 305

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E FLA + EMP++SG+A+GFDRLVML  GA  I++V+WTP
Sbjct: 306 EAFLAAVGEMPEASGVALGFDRLVMLAAGATTIDQVVWTP 345


>gi|192291172|ref|YP_001991777.1| tRNA synthetase class II (D K and N) [Rhodopseudomonas palustris
           TIE-1]
 gi|192284921|gb|ACF01302.1| tRNA synthetase class II (D K and N) [Rhodopseudomonas palustris
           TIE-1]
          Length = 351

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 174/340 (51%), Positives = 229/340 (67%), Gaps = 2/340 (0%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
            PWWNRD +  R+PFL  R  +  ++R +F    F E+++  LQ SPGNETH+ A  TEL
Sbjct: 8   SPWWNRDRYLDRQPFLRARGGVTRAVRAWFEAAGFTEVETAILQISPGNETHLHAPRTEL 67

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
           +  D  R+  YL+TSPEF+CKKLLAAGE +IF  A  +R+ E+G +H PEFTMLEWYRA 
Sbjct: 68  LGPDGERRIRYLRTSPEFACKKLLAAGETRIFELARVFRDRERGRVHLPEFTMLEWYRAE 127

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
             Y+Q++ DC+ ++R AAE      FSF+    +P +EPE +TVA+AFAR+A IDL  T+
Sbjct: 128 APYQQVIDDCIALVRVAAEATGIATFSFRGRRADPQAEPERLTVADAFARFAGIDLLATI 187

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
              +     L    A +   R+A DDTWSDIFS++L+E +EP LG    T+L  YPAPE+
Sbjct: 188 AKGEGDRTALANAAAARV--RIAEDDTWSDIFSKVLVEHVEPRLGDGRLTVLSEYPAPEA 245

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA   P DPR  +RFELYAC +EL N   EL +  EQR RF   M EK++ Y E YP+D
Sbjct: 246 ALARTKPDDPRVAERFELYACGVELANGFGELTNAAEQRERFMAAMDEKERRYGERYPLD 305

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E FLA + EMP++SG+A+GFDRLVML  GA  I++V+WTP
Sbjct: 306 EAFLAAVGEMPEASGVALGFDRLVMLAAGATTIDQVVWTP 345


>gi|168704919|ref|ZP_02737196.1| lysyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 553

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 85/423 (20%), Positives = 148/423 (34%), Gaps = 77/423 (18%)

Query: 1   MHQIPSQPWWNRDFHYRRR----------PFLLK---RNMIQSSLREYFVENQFIEIDSM 47
           +   P   +   D  YR R            L +   R  I  ++R +     ++E+++ 
Sbjct: 138 LEPHPKDVYGMGDEEYRLRHRYLDMVYTPDTLRRAHQRVKIIRTIRNHLDAQGYMEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +L    G     R F T     + +   L+++ + E   K+LL  G EK++     +RN 
Sbjct: 198 TLHAIAGGAA-ARPFETH---HNALDIDLFVRIALELPLKRLLVGGIEKVYELGRVFRNE 253

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN------------------- 148
                H PEFTMLE Y+++  Y+ +M     +I    +V                     
Sbjct: 254 GISRKHNPEFTMLELYQSYGDYQTMMDLTEGLIVACVDVVGPTATVNLDEEYEDKGEKKT 313

Query: 149 ------------QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD------ 190
                       ++   F     N     +     + F  +   D+              
Sbjct: 314 RAVPHRVYDLHGERHLRFGEKVVNFNPPFQRAKYGDLFKEHVGCDMTDEAAVLAAARAAN 373

Query: 191 --QPDRHLLYLQAQQAGI-----------------RVAHDDTWSDIFSRILIEKIEPNLG 231
                +      A++  +                  +        +   +  + +E    
Sbjct: 374 IATEGKDKTTNYAEKLNLAYKKVAQTVPADAQPPREITTPKAHVVLVQELFEKFVED--A 431

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +     +  YP+P   L      +P   +RFELY   +EL NA  EL DPI Q   F ++
Sbjct: 432 LVGPVFVYDYPSPLCPLTKRKRENPAIAERFELYVHGMELANAYTELNDPITQEQTFSQQ 491

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +       +    +D DF+  L   MP + G+ +G DRLVML+T    I +VI  P  + 
Sbjct: 492 LAGLSD-DDSMAKMDHDFIRALRHGMPPAGGLGIGIDRLVMLLTNTQTIRDVILFPLLRP 550

Query: 351 NQE 353
            Q+
Sbjct: 551 EQK 553


>gi|251788031|ref|YP_003002752.1| lysyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247536652|gb|ACT05273.1| lysyl-tRNA synthetase-related protein GenX [Dickeya zeae Ech1591]
          Length = 325

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 102/333 (30%), Positives = 164/333 (49%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD-HIRKPLYLQT 80
           LLKR  I   +R +F +   +E+++ ++  +   + H+  F T  +         LYL T
Sbjct: 16  LLKRASIMKEIRRFFSDRGVLEVETPAMSQATVTDVHLFPFQTRFVGPGVADGMALYLMT 75

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H    +LM +  +++
Sbjct: 76  SPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNPEFTMLEWYRPHYDMYRLMNEMDDLL 135

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   E    ++                ++  +AF R+  +D       P   D+  L   
Sbjct: 136 QQVLECDGAEM----------------LSYQQAFQRHLEVD-------PLSADKAQLREA 172

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A++ G+      ++    +   +    +EP +G +    +  +PA ++ALA I   D R 
Sbjct: 173 AEKIGVGDVANREEDRDTLLQLLFAFGVEPQIGRDKPAFVYHFPATQAALAEISTEDHRV 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
            +RFE+Y   +EL N   EL D  EQR RFE++ +++        PIDE+ LA L   +P
Sbjct: 233 AERFEVYYKGVELANGFCELTDGKEQRQRFEQDNRKRAARGLPVQPIDENLLAALAAGIP 292

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             SG+A+G DRLVML   A +I EV+     ++
Sbjct: 293 PCSGVAVGVDRLVMLALNAESIGEVMAFTVDRA 325


>gi|317493558|ref|ZP_07951979.1| tRNA synthetase class II [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918501|gb|EFV39839.1| tRNA synthetase class II [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 325

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 171/345 (49%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I S++R +F +   +E+D+ ++  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRATIMSTIRRFFSDRGVLEVDTPAMSQATVTDIHLVPFQTHFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEF+MLEWYR H  
Sbjct: 64  GAAQGMTLYMMTSPEYHMKRLLAAGSGPIYQLGKSFRNEESGRHHNPEFSMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   E  +                 E ++  +AF R+ ++D       
Sbjct: 124 MYRLMNEVDDLLQQVLECDSA----------------ETLSYQQAFIRHLDVD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G +  T +  +PA ++
Sbjct: 161 PLSADKIQLREVAAKLDLSNVADQEEDRDTLLQLLFTFGVEPNIGRDKPTFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQR RFE++ +++  +    +P+D
Sbjct: 221 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQRMRFEQDNRKRAALGLPQHPLD 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E+ LA L   +P  SG+A+G DRL+ML   A  ++EVI  P  ++
Sbjct: 281 ENLLAALEHGLPDCSGVALGVDRLIMLALKAERLSEVIAFPVDRA 325


>gi|146340544|ref|YP_001205592.1| putative lysyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146193350|emb|CAL77366.1| Putative lysyl-tRNA synthetase (Lysine--tRNA ligase)
           [Bradyrhizobium sp. ORS278]
          Length = 351

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 172/340 (50%), Positives = 227/340 (66%), Gaps = 3/340 (0%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
            PWW+   H   RPFL  R  I  +LR +F E  F E+++  LQ SPGNETH+ A +T L
Sbjct: 9   SPWWSPQRHADVRPFLQARAAITRALRGWFEEQGFTEVETGILQLSPGNETHLHAPATAL 68

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
           +  D ++   YL+TSPEF+CKKLLAAGE +IF FA  +R+ E+G LH PEFTMLEWYRA 
Sbjct: 69  MAADGVQHKRYLRTSPEFACKKLLAAGERRIFEFARVFRDRERGDLHLPEFTMLEWYRAE 128

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
             Y+ +M D + +I  AA+    + F+F+    +P++EPE +TVA AF R+A IDL  T+
Sbjct: 129 APYDAIMADTVVVIAHAAQATGIRQFAFRGRTADPYAEPELLTVAGAFERHAGIDLLATI 188

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
              D+         A +  IR+  DDTWSD+FS++L+E IEP LG    T+L  YP+PE+
Sbjct: 189 R--DRTGDRDALAAAARGKIRIGADDTWSDLFSKVLVEHIEPQLGNKRVTVLYEYPSPEA 246

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           AL     ADPR  +RFE+YAC +EL N   EL D +EQR RFE EM EK++ Y E YP+D
Sbjct: 247 AL-ARVAADPRVAERFEVYACGVELANGFGELTDALEQRRRFELEMAEKQRRYGERYPLD 305

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           EDFLA +  MPQ+SG+A+GFDRLVML  GA  I++V+WTP
Sbjct: 306 EDFLAAVAAMPQASGVALGFDRLVMLAAGAVRIDQVVWTP 345


>gi|238793397|ref|ZP_04637023.1| lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238727366|gb|EEQ18894.1| lysyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 340

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 101/354 (28%), Positives = 168/354 (47%), Gaps = 30/354 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           +  +     W           LLKR  I + +R +F +   +E+++ ++  +   + H+ 
Sbjct: 13  LTTMSETASWQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDVHLV 69

Query: 61  AFSTELIIQDHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
            F T  +         LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTM
Sbjct: 70  PFQTRFVGPGAADGLTLYMMTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAGRHHNPEFTM 129

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           LEWYR H    +LM +  ++++   +  + +                 ++  +AF R+ +
Sbjct: 130 LEWYRPHYDMYRLMNEVDDLLQQILDCNSAET----------------LSYQQAFLRHLD 173

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTI 237
           ID       P   D+  L   A +  +    D  +    +   +    +EP++G +    
Sbjct: 174 ID-------PLSADKVQLREAAAKLDLSNIADTEEDRDTLLQLLFTVGVEPHIGRDKPAF 226

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ  RFE++ + + K
Sbjct: 227 VYHFPASQASLAEISTEDHRVAERFEVYFKGIELANGFHELTDGDEQLQRFEQDNRIRAK 286

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                 PID + +A L   +P  SG+A+G DRLVML  GA  +++VI  P  ++
Sbjct: 287 RGLPQNPIDMNLIAALKQGLPDCSGVALGVDRLVMLALGAERLDDVIAFPVGRA 340


>gi|300721668|ref|YP_003710943.1| putative lysyl-tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297628160|emb|CBJ88713.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Xenorhabdus nematophila ATCC 19061]
          Length = 325

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 168/342 (49%), Gaps = 30/342 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRAKILAEIRRFFADRGVLEVETPAMSQATVTDIHLVPFQTRFVGP 63

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LYL TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGLTLYLMTSPEYHMKRLLAAGSGSIYQIGKSFRNEEAGRQHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   E  + +                 ++  +AF RY NID       
Sbjct: 124 MYRLMNEVDDLLQQILECESAES----------------LSYQQAFIRYLNID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P    +  L   A +  +    D  +    +   + +  +E  +GI   T +  +PA ++
Sbjct: 161 PLTASKEKLREVAAKLDLSNIADQEEDRDTLLQLLFVMSVETQIGIEKPTFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   +EL N   EL D  EQ  RFE++ ++++++     PID
Sbjct: 221 SLAEISKEDHRVAERFEVYFKGMELANGFRELTDSDEQCLRFEQDNRKREEMGLPVQPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  LA L   MP+ +G+A+G DRL+ML  GA+ +++VI  P 
Sbjct: 281 DHLLAALAHGMPECAGVALGVDRLIMLALGADRMSDVIAFPV 322


>gi|238784785|ref|ZP_04628787.1| lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238714298|gb|EEQ06308.1| lysyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 340

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 100/351 (28%), Positives = 164/351 (46%), Gaps = 30/351 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           +  +     W           LLKR  I + +R +F +   +E+++ ++  +   + H+ 
Sbjct: 13  LTTMSETASWQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDVHLV 69

Query: 61  AFSTELIIQDHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
            F T  +         LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTM
Sbjct: 70  PFQTRFVGPGAADGVTLYMMTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAGRHHNPEFTM 129

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           LEWYR H    +LM +  ++++   +  + +                 ++  +AF R+  
Sbjct: 130 LEWYRPHYDMYRLMNEVDDLLQQILDCNSAET----------------LSYQQAFQRHLG 173

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTI 237
           ID       P   D+  L   A +  +    D  +    +   +    +EP++G +    
Sbjct: 174 ID-------PLSADKAQLREAAAKLDLGNIADTEEDRDTLLQLLFTVGVEPHIGRDKPAF 226

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ  RFE++ + + K
Sbjct: 227 VYHFPASQASLAVISTEDHRVAERFEVYFKGIELANGFHELTDGDEQLQRFEQDNRSRAK 286

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 PID + +A L   +P  SG+A+G DRLVML   A  +++VI  P 
Sbjct: 287 RGLPQNPIDMNLIAALKHGLPDCSGVALGVDRLVMLALNAERLSDVIAFPV 337


>gi|315617570|gb|EFU98176.1| tRNA synthetase class II family protein [Escherichia coli 3431]
          Length = 325

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 7   WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEIGRYHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  +D       
Sbjct: 124 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEVD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 161 PLSADKTQLREAAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 221 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAHEQQQRFEQDNRKRAARGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 281 KNLIDALEVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 325


>gi|218551427|ref|YP_002385219.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226737087|sp|B7LLT9|SYK3_ESCF3 RecName: Full=Uncharacterized protein YjeA
 gi|218358969|emb|CAQ91629.1| lysyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|324112245|gb|EGC06223.1| tRNA synthetase class II [Escherichia fergusonii B253]
 gi|325499693|gb|EGC97552.1| lysyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 325

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 165/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMTEIRRFFADRGVLEVETPCMSQATVTDIHLVPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     L+L TSPE+  K+LL AG   IF    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPIFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   + A                  E ++  +AF RY  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDCA----------------PAESLSYQQAFQRYLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRV--AHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +      ++    +   +    +EPN+G    T +  
Sbjct: 161 ------PLSADKAQLREAAAKLDLSNVADEEEDRDTLLQLLFTFGVEPNIGKEKPTFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ  RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQEQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +PID + +  L   MP  SG+A+G DRLVML  GA  +++VI     ++
Sbjct: 275 PQHPIDHNLIEALKVGMPDCSGVALGVDRLVMLALGAERLSDVIAFSVDRA 325


>gi|331650284|ref|ZP_08351356.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli M605]
 gi|26111483|gb|AAN83665.1|AE016771_176 Putative lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|331040678|gb|EGI12836.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli M605]
          Length = 352

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 34  WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 90

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 91  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 150

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  ID       
Sbjct: 151 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEID------- 187

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 188 PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 247

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 248 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPID 307

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 308 QNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 352


>gi|114799660|ref|YP_761815.1| tRNA synthetase, class II [Hyphomonas neptunium ATCC 15444]
 gi|114739834|gb|ABI77959.1| tRNA synthetase, class II [Hyphomonas neptunium ATCC 15444]
          Length = 347

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 154/343 (44%), Positives = 215/343 (62%), Gaps = 5/343 (1%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +    WWN + H RRR  LL R  ++++LR +F    F+E +  +L  SPGNE H+ AF 
Sbjct: 1   MDVSGWWNPEVHARRRGHLLARGRVKTALRRWFDGEGFVETECGALVVSPGNEAHLHAFE 60

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           T+ + ++   +  YL TSPEF+ KKLLAAGE +IF FA A+RN E G  H PEFTMLEWY
Sbjct: 61  TQFVAENGQTRSFYLHTSPEFAMKKLLAAGEPRIFDFARAYRNRETGDRHAPEFTMLEWY 120

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           RA      +M DC+++ R AAE A +    ++  +C+P  EPE +T+ +AF RYA IDL 
Sbjct: 121 RAGAEMADVMGDCVSLARIAAEAAGKGQLVWKGHSCDPGLEPETLTLVDAFERYARIDLA 180

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                    D    +  A  AG+ ++   +W+DIFS +L+ KIEP+LG+   T L RYP 
Sbjct: 181 R-----HLEDIEGFHAAALAAGVGISAGASWTDIFSAVLVTKIEPHLGMERLTFLCRYPI 235

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
            E+AL+   P DPRF +RFE+YAC +EL N   EL D +    R   EM  K+ +Y E Y
Sbjct: 236 SEAALSRPAPDDPRFAERFEMYACGVELANGYRELTDAVLLEARQRAEMHIKEAVYGERY 295

Query: 304 PIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P+D DF+  +  MP++SG+A+GFDRL ML +GA +I++V+WTP
Sbjct: 296 PLDPDFIDAVAVMPEASGVALGFDRLAMLASGAPSISDVLWTP 338


>gi|323965545|gb|EGB60999.1| tRNA synthetase class II [Escherichia coli M863]
 gi|323975501|gb|EGB70602.1| tRNA synthetase class II [Escherichia coli TW10509]
 gi|327250099|gb|EGE61818.1| tRNA synthetases class II family protein [Escherichia coli STEC_7v]
          Length = 325

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 7   WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  ID       
Sbjct: 124 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 161 PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 221 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E+ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 281 ENLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 325


>gi|238796044|ref|ZP_04639555.1| lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719989|gb|EEQ11794.1| lysyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 340

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 30/352 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           +  +     W           LLKR  I + +R +F +   +E+++ ++  +   + H+ 
Sbjct: 13  LTTMSETASWQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLV 69

Query: 61  AFSTELIIQDHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
            F T  +         LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTM
Sbjct: 70  PFETRFVGPGAADGLTLYMMTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAGRHHNPEFTM 129

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           LEWYR H    +LM +  ++++   +  + +                 ++  +AF R+  
Sbjct: 130 LEWYRPHYDMYRLMNEVDDLLQQILDCNSAET----------------LSYQQAFQRHLG 173

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTI 237
           ID       P   ++  L   A +  +    D  +    +   +    +EP++G +    
Sbjct: 174 ID-------PLSAEKAQLREAAAKLDLSNVADTEEDRDTLLQLLFTVGVEPHIGRDKPAF 226

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ  RFE++ + + K
Sbjct: 227 VYHFPASQASLAVISTEDHRVAERFEVYFKGIELANGFHELTDGDEQLQRFEQDNRSRAK 286

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +PID + +A L   +P  SG+A+G DRLVML   A  +++VI  P  
Sbjct: 287 RGLPQHPIDMNLIAALKHGLPDCSGVALGVDRLVMLALNAERLSDVIAFPVD 338


>gi|170766763|ref|ZP_02901216.1| lysyl-tRNA synthetase homolog GenX [Escherichia albertii TW07627]
 gi|170124201|gb|EDS93132.1| lysyl-tRNA synthetase homolog GenX [Escherichia albertii TW07627]
          Length = 325

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 7   WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  +D       
Sbjct: 124 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEVD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 161 PLSADKTQLREAAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 221 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAHEQQQRFEQDNRKRAARGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 281 KNLIDALEVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 325


>gi|8928399|sp|Q9ZIY0|SYK3_HAEGA RecName: Full=Uncharacterized protein YjeA
 gi|4101633|gb|AAD01242.1| lysyl-tRNA synthetase homolog [Avibacterium paragallinarum]
          Length = 322

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 107/342 (31%), Positives = 166/342 (48%), Gaps = 28/342 (8%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           S+  W           LL R  I + +R++F E   +E+++  L      + H+  FST+
Sbjct: 2   SEHQWKPTASI---QTLLSRAKIIAEIRQFFSERGLLEVETPILSEFGVTDVHLSTFSTK 58

Query: 66  LIIQD-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
           LI       K L+L TSPE+  K+LL+AG   IF     +RN E G  H PEFTMLEWYR
Sbjct: 59  LISPFQKKEKTLWLSTSPEYPMKRLLSAGSGAIFQLCKVFRNEEAGKKHSPEFTMLEWYR 118

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
            +    +L+ +  ++++   +                    E ++   AF  Y  ID   
Sbjct: 119 PYFDMYRLINEVDDLLQYILDC----------------EPAESMSYQFAFQEYVGID--- 159

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
               P    +  L  +A++  +  A  +    +   +    +E  +G +    +  +PA 
Sbjct: 160 ----PLSASQDKLIEKAKEYCLENAEREDRDTLLQFLFNVAVESQIGKDKPVAIYHFPAT 215

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           ++ALA I   D R  +RFE Y   +EL N   EL D  EQRHRFE++ ++++++    + 
Sbjct: 216 QAALAQISSEDHRVAERFEFYYKGLELANGFCELTDANEQRHRFEQDNKQRERLGLPIHQ 275

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           IDE FLA L   +P  SG+A+G DRL+M+  G  NINEVI  
Sbjct: 276 IDERFLAALKAGVPNCSGVALGVDRLIMIALGLENINEVIAF 317


>gi|18312919|ref|NP_559586.1| lysyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|18160412|gb|AAL63768.1| lysyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 482

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 161/365 (44%), Gaps = 35/365 (9%)

Query: 2   HQIPSQPWW--NRD----FHYRR---------RPFLLKRNMIQSSLREYFVENQFIEIDS 46
             +P   W   +RD      YR          R  +  R  +  + RE   +  F+EI +
Sbjct: 134 QPLPE--WGKVDRDSPFYMRYRSVAMVLDLQLRWRIAARAKLIQAFREAMWKRGFLEIPT 191

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             LQ   G     R F+T++     I +  YL+ SPE   K+ + AG  K+F     +RN
Sbjct: 192 PVLQPIYGGAA-ARPFTTKIW---AIDEEWYLRISPELYLKRYIIAGFPKVFEIGPQFRN 247

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEP 165
            +   LH PEF  LE Y+A+  Y+ +M+    ++    + V    +  +++ N N     
Sbjct: 248 EDIDALHNPEFWSLEAYQAYADYKDIMRLTEEVVYEAVSSVLGTGVVKYRDWNINFNPPW 307

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             IT+ +A   +A +D       PD+     +  + ++  + +           ++  + 
Sbjct: 308 RRITLHDALREFAGVD-------PDKLTDDQIKERLRELQVPIRV-YNRGVALVKLFEKL 359

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   + L   +   P   +RFE +    E+ NA  EL DP+ Q 
Sbjct: 360 VEKK--LVEPTFVMDYPEESTPLCKPHRERPGLVERFEAFVGGHEVANAYTELNDPVRQY 417

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F +E +   K  +E +P+D DF+  L+  MP + G+ +G DRL M++T A +I +VI 
Sbjct: 418 EYFVREEELFPK--DEAHPLDWDFVEELSFGMPPTGGVGIGVDRLAMIITNAESIKDVIP 475

Query: 345 TPFSQ 349
            P  +
Sbjct: 476 YPIVK 480


>gi|119873242|ref|YP_931249.1| lysyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119674650|gb|ABL88906.1| lysyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 482

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 155/366 (42%), Gaps = 37/366 (10%)

Query: 2   HQIPSQPWW--NRD----FHYRR---------RPFLLKRNMIQSSLREYFVENQFIEIDS 46
             +P   W   +RD      YR          R  +  R     +LRE   +  FIEI +
Sbjct: 134 QPLPE--WGKVDRDSPFYMRYRSVAMVLDLQLRWRIAARAKFIQALREAMWKRGFIEIPT 191

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             LQ   G     R F+T++     I +  YL+ SPE   K+ + AG  K+F     +RN
Sbjct: 192 PVLQPIYGGAA-ARPFTTKIW---AIDEEWYLRISPELYLKRYIIAGFPKVFEVGPQFRN 247

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEP 165
            +   LH PEF  LE Y+A+  Y  +MK    ++  A        +  +++   N     
Sbjct: 248 EDIDALHNPEFWSLEAYQAYADYNDMMKLTEEVVYEAVSAVLGTGVVKYRDQTINFSPPW 307

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             IT+ +A   Y  +D     D+  +     L +  +              +F +++ +K
Sbjct: 308 RRITLHDALREYGGVDPDRLTDDQIKEKLRELQVPVKVYN----RGIALVKLFEKLVEKK 363

Query: 226 -IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +EP   +        YP   + L   +       +RFE +    E+ NA  EL DP+ Q
Sbjct: 364 LVEPTFVL-------DYPEESTPLCKPHREKRGLVERFEAFVGGHEVANAYTELNDPVRQ 416

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
              F +E +   K   E +P+D DF+  L+  MP + G+ +G DRL M++T A +I +VI
Sbjct: 417 YEYFVREEELFPK--EEAHPLDWDFVEELSFGMPPTGGVGIGIDRLAMVITNAESIKDVI 474

Query: 344 WTPFSQ 349
             P  +
Sbjct: 475 PYPIVK 480


>gi|254037171|ref|ZP_04871248.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226840277|gb|EEH72279.1| lysyl-tRNA synthetase [Escherichia sp. 1_1_43]
          Length = 335

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 17  WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 73

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 74  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 133

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  ID       
Sbjct: 134 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEID------- 170

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 171 PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 230

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 231 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPID 290

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 291 QNLIDALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 335


>gi|117626504|ref|YP_859827.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|237703824|ref|ZP_04534305.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|331644905|ref|ZP_08346022.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H736]
 gi|331655988|ref|ZP_08356976.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli M718]
 gi|331665824|ref|ZP_08366718.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA143]
 gi|331671065|ref|ZP_08371898.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA271]
 gi|331680290|ref|ZP_08380949.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H591]
 gi|331681177|ref|ZP_08381814.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H299]
 gi|332280941|ref|ZP_08393354.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|25391867|pir||H91270 probable lysyl-tRNA synthetase [imported] - Escherichia coli
           (strain O157:H7, substrain RIMD 0509952)
 gi|25501226|pir||H86111 probable lysyl-tRNA synthetase yjeA [imported] - Escherichia coli
           (strain O157:H7, substrain EDL933)
 gi|12519142|gb|AAG59356.1|AE005649_1 putative lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           EDL933]
 gi|536999|gb|AAA97054.1| lysyl-tRNA synthetase analog [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13364613|dbj|BAB38559.1| putative lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           Sakai]
 gi|73858122|gb|AAZ90829.1| putative lysyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|81243576|gb|ABB64286.1| putative lysyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|115515628|gb|ABJ03703.1| lysyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|209750398|gb|ACI73506.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|209750400|gb|ACI73507.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|209750402|gb|ACI73508.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|209750404|gb|ACI73509.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|209750406|gb|ACI73510.1| putative lysyl-tRNA synthetase [Escherichia coli]
 gi|226901736|gb|EEH87995.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|331035880|gb|EGI08118.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H736]
 gi|331046342|gb|EGI18432.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli M718]
 gi|331056875|gb|EGI28869.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA143]
 gi|331061654|gb|EGI33580.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA271]
 gi|331071753|gb|EGI43089.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H591]
 gi|331081398|gb|EGI52559.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli H299]
 gi|332103293|gb|EGJ06639.1| lysyl-tRNA synthetase [Shigella sp. D9]
          Length = 335

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 17  WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 73

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 74  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 133

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  ID       
Sbjct: 134 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEID------- 170

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 171 PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 230

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 231 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPID 290

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 291 QNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 335


>gi|145520227|ref|XP_001445971.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413444|emb|CAK78574.1| unnamed protein product [Paramecium tetraurelia]
          Length = 366

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 78/340 (22%), Positives = 144/340 (42%), Gaps = 35/340 (10%)

Query: 39  NQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIF 98
             FIE+++ SL    G  T  + F T     + + + L+++ +PE   K L+  G ++++
Sbjct: 2   KGFIEVETPSLNVIQGGAT-AKPFKT---FHNSLHRDLFMRVAPELYLKMLIVGGLDRVY 57

Query: 99  CFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII------------------ 140
                +RN      H PEFT +E+Y A+  Y  LM     ++                  
Sbjct: 58  EIGKNFRNEGIDQTHNPEFTAMEFYWAYCDYNDLMTVTEEVLSQIVLKLKGSYKFKIHKG 117

Query: 141 --------RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                       +  + K      +  +       +++     +     L   L++ +  
Sbjct: 118 DNPTITLTEHDIKSGHFKEKEEDFLELDFTPPWPRVSMMAELEKKLGEKLPEVLESEEAN 177

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                  QA++  +  ++  T + +  +++   +E  +     T L  +P   S L+ ++
Sbjct: 178 --AFFNAQAKKHKVECSNPRTTARLIDKLVGHFLE--VNFKNPTFLIDHPQLMSPLSKVH 233

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
              P  T+RFEL+    ELCNA  EL DP  Q+  F+K++++  K  +E    DE F+  
Sbjct: 234 RQYPGLTERFELFVNYHELCNAYTELNDPFVQKALFQKQVEDAAKGDDEAMGYDEGFIKS 293

Query: 313 LTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           L   +P ++G  +G DR VML+T   NI EV+  P  +  
Sbjct: 294 LEHALPPTAGWGLGIDRFVMLLTDTQNIQEVLLFPAMKPE 333


>gi|331671309|ref|ZP_08372107.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA280]
 gi|331071154|gb|EGI42511.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA280]
          Length = 335

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 17  WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 73

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 74  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 133

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  ID       
Sbjct: 134 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEID------- 170

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 171 PLSADKTQLREVAAKLDLSNVADIEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 230

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 231 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPID 290

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 291 QNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 335


>gi|198242311|ref|YP_002218231.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|238690364|sp|B5FRL4|SYK3_SALDC RecName: Full=Uncharacterized protein YjeA
 gi|197936827|gb|ACH74160.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|326626035|gb|EGE32380.1| Uncharacterized protein YjeA [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 325

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   +                    E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDC----------------QPAESLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G    T +  
Sbjct: 161 ------PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID++ L  L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 275 PQQPIDQNLLDALAAGLPDCSGVALGIDRLVMLALGAESLADVIAFTVDRA 325


>gi|123440749|ref|YP_001004741.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166229788|sp|A1JIQ4|SYK3_YERE8 RecName: Full=Uncharacterized protein YjeA
 gi|122087710|emb|CAL10495.1| putative lysyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 325

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 101/345 (29%), Positives = 167/345 (48%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFQTRFVGP 63

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGLTLYMMTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +  +                 E ++  +AF R+ +ID       
Sbjct: 124 MYRLMDEVEDLLQQILDCDSS----------------ERLSYQQAFLRHLDID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EP++G +    +  +PA ++
Sbjct: 161 PLSADKAQLREAAAKLDLSNIADTEEDRDTLLQLLFTVGVEPHIGRDKPAFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ  RFE++ + ++K     +PID
Sbjct: 221 SLAVISTEDHRVAERFEVYFKGIELANGFHELTDGDEQLKRFEQDNRSREKRGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            + +  L   +P  SG+A+G DRLVML  GA  +++VI  P  ++
Sbjct: 281 MNLIDALKHGLPDCSGVALGVDRLVMLALGAEKLSDVIAFPVGRA 325


>gi|238757508|ref|ZP_04618693.1| lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704270|gb|EEP96802.1| lysyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 332

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 101/351 (28%), Positives = 165/351 (47%), Gaps = 30/351 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           +  +     W           LLKR  I + +R +F +   +E+++ ++  +   + H+ 
Sbjct: 5   LTTMSETASWQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDVHLV 61

Query: 61  AFSTELIIQDHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
            F T  +         LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTM
Sbjct: 62  PFETRFVGPGAADGLTLYMMTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAGRHHNPEFTM 121

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           LEWYR H    +LM +  ++++   +  + +                 ++  +AF R+ +
Sbjct: 122 LEWYRPHYDMYRLMNEVDDLLQQILDCNSAET----------------LSYQQAFLRHLD 165

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTI 237
           ID       P   D+  L   A +  +    D  +    +   +    +EP++G      
Sbjct: 166 ID-------PLSADKAQLREAAAKLDLSNIADTEEDRDTLLQLLFTVGVEPHIGREKPAF 218

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ  RFE++ + + K
Sbjct: 219 VYHFPASQASLAEISTEDHRVAERFEVYFKGIELANGFHELTDADEQMKRFEQDNRIRAK 278

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 PID + +A L   +P  SG+A+G DRLVML  GA  +++VI  P 
Sbjct: 279 RGLPQNPIDMNLIAALKQGLPDCSGVALGIDRLVMLALGAERLSDVIAFPV 329


>gi|171185237|ref|YP_001794156.1| lysyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170934449|gb|ACB39710.1| lysyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 482

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 157/366 (42%), Gaps = 37/366 (10%)

Query: 2   HQIPSQPWW--NRD----FHYRR---------RPFLLKRNMIQSSLREYFVENQFIEIDS 46
             +P   W   +RD      YR          R  +  R     +LRE   +  FIEI +
Sbjct: 134 QPLPE--WGKVDRDSPFYMRYRSVAMVLDLQLRWRIAARARFIQALREAMWKRGFIEIPT 191

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             LQ   G     R F+T++     I +  YL+ SPE   K+ + AG  K+F     +RN
Sbjct: 192 PVLQPIYGGAA-ARPFTTKIW---AIDEEWYLRISPELYLKRYIIAGFPKVFEVGPQFRN 247

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEP 165
            +   LH PEF  LE Y+A+  Y  +M+    ++  A        +  +++   N     
Sbjct: 248 EDIDALHNPEFWSLEAYQAYADYNDMMRLTEEVVYEAVSAVLGTGVVKYRDQTINFSPPW 307

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             IT+ +A   Y  +D     D+  +     L +  +     VA       +F +++ +K
Sbjct: 308 RRITLHDALREYGGVDPDRLTDDQIREKLRELQVPVKVYNRGVA----LVKLFEKLVEKK 363

Query: 226 -IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +EP   +        YP   + L   +       +RFE +    E+ NA  EL DP+ Q
Sbjct: 364 LVEPTFVL-------DYPEESTPLCKPHREKRGLVERFEAFVGGHEVANAYTELNDPVRQ 416

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
              F +E +   K   E +P+D DF+  L+  MP + G+ +G DRL M++T A +I +VI
Sbjct: 417 YEYFVREEELFPK--EEAHPLDWDFVEELSFGMPPTGGVGIGVDRLAMVITNAESIKDVI 474

Query: 344 WTPFSQ 349
             P  +
Sbjct: 475 PYPIVK 480


>gi|304445705|pdb|3A5Y|A Chain A, Crystal Structure Of Genx From Escherichia Coli In Complex
           With Lysyladenylate Analog
 gi|304445706|pdb|3A5Y|B Chain B, Crystal Structure Of Genx From Escherichia Coli In Complex
           With Lysyladenylate Analog
 gi|304445707|pdb|3A5Y|C Chain C, Crystal Structure Of Genx From Escherichia Coli In Complex
           With Lysyladenylate Analog
 gi|304445708|pdb|3A5Y|D Chain D, Crystal Structure Of Genx From Escherichia Coli In Complex
           With Lysyladenylate Analog
          Length = 345

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 27  WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 83

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 84  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 143

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  ID       
Sbjct: 144 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEID------- 180

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 181 PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 240

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 241 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPID 300

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 301 QNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 345


>gi|224983651|pdb|3G1Z|A Chain A, Structure Of Idp01693YJEA, A POTENTIAL T-Rna Synthetase
           From Salmonella Typhimurium
 gi|224983652|pdb|3G1Z|B Chain B, Structure Of Idp01693YJEA, A POTENTIAL T-Rna Synthetase
           From Salmonella Typhimurium
          Length = 326

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 2   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 58

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 59  TRFVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 118

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   +                    E ++  +AF R+  ID 
Sbjct: 119 YRPHYDMYRLMNEVDDLLQQVLDC----------------QPAESLSYQQAFQRHLEID- 161

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G    T +  
Sbjct: 162 ------PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYH 215

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 216 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 275

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID++ L  L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 276 PQQPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA 326


>gi|62182793|ref|YP_219210.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161617615|ref|YP_001591580.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167553566|ref|ZP_02347315.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168231380|ref|ZP_02656438.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168237075|ref|ZP_02662133.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168467060|ref|ZP_02700908.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194446410|ref|YP_002043602.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194470854|ref|ZP_03076838.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194738327|ref|YP_002117289.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|204927009|ref|ZP_03218211.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|224586188|ref|YP_002639987.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|75478917|sp|Q57GN3|SYK3_SALCH RecName: Full=Uncharacterized protein YjeA
 gi|189082342|sp|A9N413|YJEA_SALPB RecName: Full=Uncharacterized protein YjeA
 gi|238693595|sp|B4T2Q3|SYK3_SALNS RecName: Full=Uncharacterized protein YjeA
 gi|238693673|sp|B4TSD9|SYK3_SALSV RecName: Full=Uncharacterized protein YjeA
 gi|254782466|sp|C0Q6B6|SYK3_SALPC RecName: Full=Uncharacterized protein YjeA
 gi|62130426|gb|AAX68129.1| putative pyruvate oxidase (lysyl-tRNA synthetase) [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161366979|gb|ABX70747.1| hypothetical protein SPAB_05475 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194405073|gb|ACF65295.1| putative lysyl-tRNA synthetase homolog GenX [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194457218|gb|EDX46057.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194713829|gb|ACF93050.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630612|gb|EDX49224.1| lysyl-tRNA synthetase homolog GenX [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197290011|gb|EDY29370.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|204323674|gb|EDZ08869.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205322019|gb|EDZ09858.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205334355|gb|EDZ21119.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|224470716|gb|ACN48546.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|322615510|gb|EFY12430.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322618570|gb|EFY15459.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322622017|gb|EFY18867.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322627089|gb|EFY23881.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322631048|gb|EFY27812.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322637733|gb|EFY34434.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322642397|gb|EFY39001.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322645658|gb|EFY42183.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322650502|gb|EFY46910.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322653454|gb|EFY49784.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322659719|gb|EFY55962.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322662070|gb|EFY58286.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322666181|gb|EFY62359.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322672601|gb|EFY68712.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322676031|gb|EFY72102.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322680515|gb|EFY76553.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322684591|gb|EFY80595.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322717294|gb|EFZ08865.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323192906|gb|EFZ78132.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323197218|gb|EFZ82358.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323201665|gb|EFZ86729.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323206179|gb|EFZ91141.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323213188|gb|EFZ97990.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323215561|gb|EGA00305.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323219546|gb|EGA04031.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323227849|gb|EGA12003.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323229019|gb|EGA13148.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323236369|gb|EGA20445.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323237511|gb|EGA21572.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323241823|gb|EGA25852.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323248028|gb|EGA31965.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323254641|gb|EGA38452.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323258300|gb|EGA41977.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323259577|gb|EGA43211.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323265850|gb|EGA49346.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323270294|gb|EGA53742.1| poxB regulator PoxA [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 325

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGMNLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   +                    E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDC----------------QPAESLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G    T +  
Sbjct: 161 ------PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID++ L  L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 275 PQQPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA 325


>gi|170021832|ref|YP_001726786.1| lysyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|194434730|ref|ZP_03066982.1| lysyl-tRNA synthetase homolog GenX [Shigella dysenteriae 1012]
 gi|300905988|ref|ZP_07123712.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 84-1]
 gi|300920820|ref|ZP_07137220.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 115-1]
 gi|300949115|ref|ZP_07163158.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 116-1]
 gi|300957815|ref|ZP_07169994.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 175-1]
 gi|301302575|ref|ZP_07208705.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 124-1]
 gi|307312006|ref|ZP_07591643.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli W]
 gi|312965833|ref|ZP_07780059.1| tRNA synthetase class II family protein [Escherichia coli 2362-75]
 gi|189082339|sp|B1ITP1|SYK3_ECOLC RecName: Full=Uncharacterized protein YjeA
 gi|169756760|gb|ACA79459.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli ATCC
           8739]
 gi|194417011|gb|EDX33128.1| lysyl-tRNA synthetase homolog GenX [Shigella dysenteriae 1012]
 gi|300315475|gb|EFJ65259.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 175-1]
 gi|300402155|gb|EFJ85693.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 84-1]
 gi|300412212|gb|EFJ95522.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 115-1]
 gi|300451425|gb|EFK15045.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 116-1]
 gi|300842100|gb|EFK69860.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 124-1]
 gi|306907813|gb|EFN38314.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli W]
 gi|312289076|gb|EFR16970.1| tRNA synthetase class II family protein [Escherichia coli 2362-75]
 gi|315063474|gb|ADT77801.1| predicted lysyl-tRNA synthetase [Escherichia coli W]
 gi|315255502|gb|EFU35470.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 85-1]
 gi|320180673|gb|EFW55600.1| lysyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|332083157|gb|EGI88388.1| tRNA synthetases class II family protein [Shigella boydii 5216-82]
 gi|332083621|gb|EGI88839.1| tRNA synthetases class II family protein [Shigella dysenteriae
           155-74]
 gi|332346236|gb|AEE59570.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 325

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 7   WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  ID       
Sbjct: 124 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 161 PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 221 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 281 QNLIDALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 325


>gi|304445709|pdb|3A5Z|A Chain A, Crystal Structure Of Escherichia Coli Genx In Complex With
           Elongation Factor P
 gi|304445711|pdb|3A5Z|C Chain C, Crystal Structure Of Escherichia Coli Genx In Complex With
           Elongation Factor P
 gi|304445713|pdb|3A5Z|E Chain E, Crystal Structure Of Escherichia Coli Genx In Complex With
           Elongation Factor P
 gi|304445715|pdb|3A5Z|G Chain G, Crystal Structure Of Escherichia Coli Genx In Complex With
           Elongation Factor P
          Length = 328

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 10  WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 66

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 67  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 126

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  ID       
Sbjct: 127 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEID------- 163

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 164 PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 223

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 224 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPID 283

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 284 QNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 328


>gi|320176648|gb|EFW51689.1| lysyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 325

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 7   WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  ID       
Sbjct: 124 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 161 PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 221 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  G+  + EVI     ++
Sbjct: 281 QNLIEALKVGMPDCSGVALGVDRLVMLALGSETLAEVIAFSVDRA 325


>gi|317046678|ref|YP_004114326.1| lysyl-tRNA synthetase-like protein GenX [Pantoea sp. At-9b]
 gi|316948295|gb|ADU67770.1| lysyl-tRNA synthetase-related protein GenX [Pantoea sp. At-9b]
          Length = 325

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 170/345 (49%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+D+ ++  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEVDTPAMSQATITDIHLVPFQTRFVGP 63

Query: 70  DHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                + L+L TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GASEGRDLWLMTSPEYHMKRLLAAGSGPIYQLGRSFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   E  + +                 ++  +AF R+  +D       
Sbjct: 124 MYRLMNEVDDLLQQVLECDSAES----------------LSYQQAFIRHLELD------- 160

Query: 189 PDQPDRHLLYLQAQQAG--IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A++ G       +D    +   + +  +EP +GI+  T +  +PA ++
Sbjct: 161 PLSADKAQLREAAEKLGDGELARDEDDRDTLLQLLFMLGVEPKIGIDKPTFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I   D R  +RFE+Y   +EL N   EL D  EQR RFE++ + +       +PID
Sbjct: 221 ALAEISTEDHRVAERFEVYYKGVELANGFRELTDSREQRQRFEQDNRRRAARGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            + L  L   MP  SG+A+G DRL+ML   A++++EVI  P  +S
Sbjct: 281 TNLLDALKHGMPACSGVALGVDRLIMLALKASSLSEVIAFPVDRS 325


>gi|152973029|ref|YP_001338175.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238892642|ref|YP_002917376.1| lysyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|262045412|ref|ZP_06018435.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330003261|ref|ZP_08304572.1| lysine--tRNA ligase-like protein GenX [Klebsiella sp. MS 92-3]
 gi|166229786|sp|A6TH74|SYK3_KLEP7 RecName: Full=Uncharacterized protein YjeA
 gi|150957878|gb|ABR79908.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238544958|dbj|BAH61309.1| lysyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259037241|gb|EEW38489.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328537031|gb|EGF63317.1| lysine--tRNA ligase-like protein GenX [Klebsiella sp. MS 92-3]
          Length = 325

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 106/351 (30%), Positives = 167/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  + + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSAPI---PNLLKRAAVMAEIRRFFTDRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGLNLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR      +L+ +  ++++   E                    E ++  +AF R+  ID 
Sbjct: 118 YRPCYDMYRLINEVDDLLQQVLEC----------------QPAESLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G +  T +  
Sbjct: 161 ------PLSADKAQLREVAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKDRPTFIYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I P D R  +RFE+Y   IEL N   EL D  EQR RFE++ +++     
Sbjct: 215 FPATQASLAQISPEDHRVAERFEVYYKGIELANGFHELTDAHEQRLRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID + LA L   +P  SG+A+G DR+VML  GA +I EVI     ++
Sbjct: 275 PQQPIDNNLLAALEAGLPDCSGVALGVDRVVMLALGAESIGEVIAFTVDRA 325


>gi|24115514|ref|NP_710024.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30065532|ref|NP_839703.1| lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|38704236|ref|NP_313163.2| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|89110878|ref|AP_004658.1| predicted lysyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           W3110]
 gi|90111694|ref|NP_418579.2| EF-P-lysine34-lysine ligase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|91213707|ref|YP_543693.1| lysyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110644516|ref|YP_672246.1| lysyl-tRNA synthetase [Escherichia coli 536]
 gi|110808079|ref|YP_691599.1| lysyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157155551|ref|YP_001465657.1| lysyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157163623|ref|YP_001460941.1| lysyl-tRNA synthetase [Escherichia coli HS]
 gi|161367459|ref|NP_290790.2| lysyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|161486016|ref|NP_757091.2| lysyl-tRNA synthetase [Escherichia coli CFT073]
 gi|161949986|ref|YP_405777.2| lysyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|161986385|ref|YP_313064.2| lysyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|168747981|ref|ZP_02773003.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4113]
 gi|168755345|ref|ZP_02780352.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4401]
 gi|168761025|ref|ZP_02786032.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766435|ref|ZP_02791442.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4486]
 gi|168774534|ref|ZP_02799541.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4196]
 gi|168780588|ref|ZP_02805595.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4076]
 gi|168784793|ref|ZP_02809800.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC869]
 gi|168802334|ref|ZP_02827341.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC508]
 gi|170083604|ref|YP_001732924.1| lysyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|170684036|ref|YP_001746553.1| lysyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187731526|ref|YP_001882849.1| lysyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188493357|ref|ZP_03000627.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli 53638]
 gi|191165617|ref|ZP_03027457.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli B7A]
 gi|191173345|ref|ZP_03034874.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli F11]
 gi|193065740|ref|ZP_03046804.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E22]
 gi|193067922|ref|ZP_03048888.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E110019]
 gi|194428929|ref|ZP_03061462.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli B171]
 gi|194437213|ref|ZP_03069311.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli 101-1]
 gi|195935949|ref|ZP_03081331.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208805970|ref|ZP_03248307.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812731|ref|ZP_03254060.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821484|ref|ZP_03261804.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4042]
 gi|209395929|ref|YP_002273702.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4115]
 gi|209921648|ref|YP_002295732.1| lysyl-tRNA synthetase [Escherichia coli SE11]
 gi|215489504|ref|YP_002331935.1| lysyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|217325978|ref|ZP_03442062.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           TW14588]
 gi|218556712|ref|YP_002389626.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218561317|ref|YP_002394230.1| lysyl-tRNA synthetase [Escherichia coli S88]
 gi|218692494|ref|YP_002400706.1| lysyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218697907|ref|YP_002405574.1| lysyl-tRNA synthetase [Escherichia coli 55989]
 gi|218702857|ref|YP_002410486.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218707771|ref|YP_002415290.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
 gi|227886799|ref|ZP_04004604.1| lysine--tRNA ligase [Escherichia coli 83972]
 gi|238903265|ref|YP_002929061.1| putative lysyl-tRNA synthetase [Escherichia coli BW2952]
 gi|253775215|ref|YP_003038046.1| lysyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254164089|ref|YP_003047197.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|254796179|ref|YP_003081016.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|256019803|ref|ZP_05433668.1| lysyl-tRNA synthetase [Shigella sp. D9]
 gi|256025093|ref|ZP_05438958.1| lysyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260846990|ref|YP_003224768.1| putative lysyl-tRNA synthetase [Escherichia coli O103:H2 str.
           12009]
 gi|260858311|ref|YP_003232202.1| putative lysyl-tRNA synthetase [Escherichia coli O26:H11 str.
           11368]
 gi|260870934|ref|YP_003237336.1| putative lysyl-tRNA synthetase [Escherichia coli O111:H- str.
           11128]
 gi|261225280|ref|ZP_05939561.1| predicted lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255468|ref|ZP_05948001.1| putative lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291285572|ref|YP_003502390.1| putative lysyl-tRNA synthetase [Escherichia coli O55:H7 str.
           CB9615]
 gi|293402787|ref|ZP_06646884.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293407884|ref|ZP_06651724.1| lysyl-tRNA synthetase GenX [Escherichia coli B354]
 gi|293417663|ref|ZP_06660285.1| lysyl-tRNA synthetase GenX [Escherichia coli B185]
 gi|293476470|ref|ZP_06664878.1| lysyl-tRNA synthetase GenX [Escherichia coli B088]
 gi|297518947|ref|ZP_06937333.1| lysyl-tRNA synthetase [Escherichia coli OP50]
 gi|298378317|ref|ZP_06988201.1| lysyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300816542|ref|ZP_07096763.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 107-1]
 gi|300821251|ref|ZP_07101399.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 119-7]
 gi|300899695|ref|ZP_07117922.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 198-1]
 gi|300922435|ref|ZP_07138555.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 182-1]
 gi|300929267|ref|ZP_07144743.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 187-1]
 gi|300940646|ref|ZP_07155207.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 21-1]
 gi|300974952|ref|ZP_07172791.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 45-1]
 gi|300975245|ref|ZP_07172909.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 200-1]
 gi|301023451|ref|ZP_07187232.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 69-1]
 gi|301027978|ref|ZP_07191262.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 196-1]
 gi|301047617|ref|ZP_07194683.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 185-1]
 gi|301325922|ref|ZP_07219343.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 78-1]
 gi|301646602|ref|ZP_07246468.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 146-1]
 gi|306815625|ref|ZP_07449774.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|307140852|ref|ZP_07500208.1| lysyl-tRNA synthetase [Escherichia coli H736]
 gi|309787696|ref|ZP_07682307.1| tRNA synthetase class II family protein [Shigella dysenteriae 1617]
 gi|309796970|ref|ZP_07691370.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 145-7]
 gi|312974035|ref|ZP_07788206.1| tRNA synthetase class II family protein [Escherichia coli 1827-70]
 gi|67473146|sp|P0A8N7|SYK3_ECOLI RecName: Full=Uncharacterized protein YjeA; AltName: Full=GX
 gi|67473147|sp|P0A8N8|SYK3_ECOL6 RecName: Full=Uncharacterized protein YjeA
 gi|67473148|sp|P0A8N9|SYK3_ECO57 RecName: Full=Uncharacterized protein YjeA
 gi|67473149|sp|P0A8P0|SYK3_SHIFL RecName: Full=Uncharacterized protein YjeA
 gi|122421482|sp|Q1R3A2|SYK3_ECOUT RecName: Full=Uncharacterized protein YjeA
 gi|123146416|sp|Q0SXC1|SYK3_SHIF8 RecName: Full=Uncharacterized protein YjeA
 gi|123147396|sp|Q0T9N4|SYK3_ECOL5 RecName: Full=Uncharacterized protein YjeA
 gi|166980061|sp|A7ZV28|SYK3_ECO24 RecName: Full=Uncharacterized protein YjeA
 gi|166980062|sp|A8A7Q4|SYK3_ECOHS RecName: Full=Uncharacterized protein YjeA
 gi|226737082|sp|B7MKW2|SYK3_ECO45 RecName: Full=Uncharacterized protein YjeA
 gi|226737083|sp|B7NTL6|SYK3_ECO7I RecName: Full=Uncharacterized protein YjeA
 gi|226737084|sp|B7M8S0|SYK3_ECO8A RecName: Full=Uncharacterized protein YjeA
 gi|226737085|sp|B7NG94|SYK3_ECOLU RecName: Full=Uncharacterized protein YjeA
 gi|226737086|sp|B1LQH8|SYK3_ECOSM RecName: Full=Uncharacterized protein YjeA
 gi|229470733|sp|B1XDQ9|SYK3_ECODH RecName: Full=Uncharacterized protein YjeA
 gi|238064859|sp|B5Z2G6|SYK3_ECO5E RecName: Full=Uncharacterized protein YjeA
 gi|238064860|sp|B6I264|SYK3_ECOSE RecName: Full=Uncharacterized protein YjeA
 gi|238691725|sp|B2TY33|SYK3_SHIB3 RecName: Full=Uncharacterized protein YjeA
 gi|254782463|sp|B7UPX7|SYK3_ECO27 RecName: Full=Uncharacterized protein YjeA
 gi|254782464|sp|B7LC16|SYK3_ECO55 RecName: Full=Uncharacterized protein YjeA
 gi|254782465|sp|B7MSX2|SYK3_ECO81 RecName: Full=Uncharacterized protein YjeA
 gi|259511521|sp|C5A1E9|SYK3_ECOBW RecName: Full=Uncharacterized protein YjeA
 gi|41552|emb|CAA42604.1| genX [Escherichia coli]
 gi|24054839|gb|AAN45731.1| putative lysyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30043796|gb|AAP19515.1| putative lysyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|85676909|dbj|BAE78159.1| predicted lysyl-tRNA synthetase [Escherichia coli str. K12 substr.
           W3110]
 gi|87082379|gb|AAC77115.2| EF-P-lysine34-lysine ligase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|91075281|gb|ABE10162.1| putative lysyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110346108|gb|ABG72345.1| putative lysyl-tRNA synthetase [Escherichia coli 536]
 gi|110617627|gb|ABF06294.1| putative lysyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157069303|gb|ABV08558.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli HS]
 gi|157077581|gb|ABV17289.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E24377A]
 gi|169891439|gb|ACB05146.1| predicted lysyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170521754|gb|ACB19932.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli SMS-3-5]
 gi|187428518|gb|ACD07792.1| lysyl-tRNA synthetase homolog GenX [Shigella boydii CDC 3083-94]
 gi|187769950|gb|EDU33794.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4196]
 gi|188017485|gb|EDU55607.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4113]
 gi|188488556|gb|EDU63659.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli 53638]
 gi|189001774|gb|EDU70760.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4076]
 gi|189357394|gb|EDU75813.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364222|gb|EDU82641.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4486]
 gi|189368582|gb|EDU86998.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374902|gb|EDU93318.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC869]
 gi|189375660|gb|EDU94076.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC508]
 gi|190904312|gb|EDV64021.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli B7A]
 gi|190906321|gb|EDV65931.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli F11]
 gi|192926609|gb|EDV81239.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E22]
 gi|192958897|gb|EDV89334.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli E110019]
 gi|194412982|gb|EDX29271.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli B171]
 gi|194423769|gb|EDX39758.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli 101-1]
 gi|208725771|gb|EDZ75372.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4206]
 gi|208734008|gb|EDZ82695.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741607|gb|EDZ89289.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4042]
 gi|209157329|gb|ACI34762.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           EC4115]
 gi|209914907|dbj|BAG79981.1| putative lysyl-tRNA synthase [Escherichia coli SE11]
 gi|215267576|emb|CAS12031.1| predicted lysyl-tRNA synthetase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217322199|gb|EEC30623.1| lysyl-tRNA synthetase homolog GenX [Escherichia coli O157:H7 str.
           TW14588]
 gi|218354639|emb|CAV01619.1| lysyl-tRNA synthetase [Escherichia coli 55989]
 gi|218363481|emb|CAR01135.1| lysyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218368086|emb|CAR05893.1| lysyl-tRNA synthetase [Escherichia coli S88]
 gi|218372843|emb|CAR20722.1| lysyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218430058|emb|CAR11047.2| lysyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218434868|emb|CAR15806.1| lysyl-tRNA synthetase [Escherichia coli UMN026]
 gi|222035930|emb|CAP78675.1| lysyl-tRNA synthetase [Escherichia coli LF82]
 gi|227836141|gb|EEJ46607.1| lysine--tRNA ligase [Escherichia coli 83972]
 gi|238862640|gb|ACR64638.1| predicted lysyl-tRNA synthetase [Escherichia coli BW2952]
 gi|242379683|emb|CAQ34506.1| predicted regulator of pyruvate oxidase [Escherichia coli
           BL21(DE3)]
 gi|253326259|gb|ACT30861.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975990|gb|ACT41661.1| lysyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253980146|gb|ACT45816.1| lysyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|254595579|gb|ACT74940.1| predicted lysyl-tRNA synthetase [Escherichia coli O157:H7 str.
           TW14359]
 gi|257756960|dbj|BAI28462.1| predicted lysyl-tRNA synthetase [Escherichia coli O26:H11 str.
           11368]
 gi|257762137|dbj|BAI33634.1| predicted lysyl-tRNA synthetase [Escherichia coli O103:H2 str.
           12009]
 gi|257767290|dbj|BAI38785.1| predicted lysyl-tRNA synthetase [Escherichia coli O111:H- str.
           11128]
 gi|260451015|gb|ACX41437.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli DH1]
 gi|281181255|dbj|BAI57585.1| putative lysyl-tRNA synthetase [Escherichia coli SE15]
 gi|281603622|gb|ADA76606.1| putative lysyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|284924341|emb|CBG37457.1| putative lysyl-tRNA synthetase [Escherichia coli 042]
 gi|290765445|gb|ADD59406.1| Putative lysyl-tRNA synthetase [Escherichia coli O55:H7 str.
           CB9615]
 gi|291320923|gb|EFE60365.1| lysyl-tRNA synthetase GenX [Escherichia coli B088]
 gi|291429702|gb|EFF02716.1| lysyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291430381|gb|EFF03379.1| lysyl-tRNA synthetase GenX [Escherichia coli B185]
 gi|291472135|gb|EFF14617.1| lysyl-tRNA synthetase GenX [Escherichia coli B354]
 gi|294490729|gb|ADE89485.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli IHE3034]
 gi|298280651|gb|EFI22152.1| lysyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|299878888|gb|EFI87099.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 196-1]
 gi|300300496|gb|EFJ56881.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 185-1]
 gi|300308744|gb|EFJ63264.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 200-1]
 gi|300356738|gb|EFJ72608.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 198-1]
 gi|300397003|gb|EFJ80541.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 69-1]
 gi|300410440|gb|EFJ93978.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 45-1]
 gi|300421254|gb|EFK04565.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 182-1]
 gi|300454534|gb|EFK18027.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 21-1]
 gi|300462760|gb|EFK26253.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 187-1]
 gi|300526140|gb|EFK47209.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 119-7]
 gi|300530772|gb|EFK51834.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 107-1]
 gi|300847275|gb|EFK75035.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 78-1]
 gi|301075149|gb|EFK89955.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 146-1]
 gi|305851287|gb|EFM51742.1| lysyl-tRNA synthetase [Escherichia coli NC101]
 gi|307556327|gb|ADN49102.1| putative lysyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307629229|gb|ADN73533.1| lysyl-tRNA synthetase [Escherichia coli UM146]
 gi|308119383|gb|EFO56645.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 145-7]
 gi|308924446|gb|EFP69942.1| tRNA synthetase class II family protein [Shigella dysenteriae 1617]
 gi|309704663|emb|CBJ04013.1| putative lysyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310331569|gb|EFP98825.1| tRNA synthetase class II family protein [Escherichia coli 1827-70]
 gi|312948809|gb|ADR29636.1| lysyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|313646371|gb|EFS10833.1| tRNA synthetase class II family protein [Shigella flexneri 2a str.
           2457T]
 gi|315138712|dbj|BAJ45871.1| putative lysyl-tRNA synthetase [Escherichia coli DH1]
 gi|315288504|gb|EFU47902.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 110-3]
 gi|315294064|gb|EFU53416.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 153-1]
 gi|320187543|gb|EFW62227.1| lysyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320190708|gb|EFW65358.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320193538|gb|EFW68175.1| lysyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|320200710|gb|EFW75296.1| lysyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|320638918|gb|EFX08564.1| poxB regulator PoxA [Escherichia coli O157:H7 str. G5101]
 gi|320644287|gb|EFX13352.1| poxB regulator PoxA [Escherichia coli O157:H- str. 493-89]
 gi|320649605|gb|EFX18129.1| poxB regulator PoxA [Escherichia coli O157:H- str. H 2687]
 gi|320655001|gb|EFX22962.1| poxB regulator PoxA [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320660508|gb|EFX27969.1| poxB regulator PoxA [Escherichia coli O55:H7 str. USDA 5905]
 gi|320665777|gb|EFX32814.1| poxB regulator PoxA [Escherichia coli O157:H7 str. LSU-61]
 gi|323156025|gb|EFZ42187.1| tRNA synthetases class II family protein [Escherichia coli EPECa14]
 gi|323162079|gb|EFZ47950.1| tRNA synthetases class II family protein [Escherichia coli E128010]
 gi|323166767|gb|EFZ52524.1| tRNA synthetases class II family protein [Shigella sonnei 53G]
 gi|323171591|gb|EFZ57237.1| tRNA synthetases class II family protein [Escherichia coli LT-68]
 gi|323176084|gb|EFZ61676.1| tRNA synthetases class II family protein [Escherichia coli 1180]
 gi|323182264|gb|EFZ67674.1| tRNA synthetases class II family protein [Escherichia coli 1357]
 gi|323189961|gb|EFZ75239.1| tRNA synthetases class II family protein [Escherichia coli RN587/1]
 gi|323380449|gb|ADX52717.1| lysyl-tRNA synthetase-related protein GenX [Escherichia coli KO11]
 gi|323935473|gb|EGB31811.1| tRNA synthetase class II [Escherichia coli E1520]
 gi|323946096|gb|EGB42132.1| tRNA synthetase class II [Escherichia coli H120]
 gi|323950773|gb|EGB46651.1| tRNA synthetase class II [Escherichia coli H252]
 gi|323955588|gb|EGB51351.1| tRNA synthetase class II [Escherichia coli H263]
 gi|323960346|gb|EGB55985.1| tRNA synthetase class II [Escherichia coli H489]
 gi|323970585|gb|EGB65844.1| tRNA synthetase class II [Escherichia coli TA007]
 gi|324008600|gb|EGB77819.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 57-2]
 gi|324015048|gb|EGB84267.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 60-1]
 gi|324019337|gb|EGB88556.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 117-3]
 gi|324118725|gb|EGC12617.1| tRNA synthetase class II [Escherichia coli E1167]
 gi|326341790|gb|EGD65573.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346635|gb|EGD70369.1| lysyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|330908501|gb|EGH37020.1| lysyl-tRNA synthetase [Escherichia coli AA86]
 gi|332749032|gb|EGJ79455.1| tRNA synthetases class II family protein [Shigella flexneri K-671]
 gi|332749300|gb|EGJ79721.1| tRNA synthetases class II family protein [Shigella flexneri
           4343-70]
 gi|332761930|gb|EGJ92204.1| tRNA synthetases class II family protein [Shigella flexneri
           2747-71]
 gi|332763203|gb|EGJ93446.1| regulator of pyruvate oxidase [Shigella flexneri 2930-71]
 gi|333009090|gb|EGK28546.1| tRNA synthetases class II family protein [Shigella flexneri K-218]
 gi|333010307|gb|EGK29740.1| tRNA synthetases class II family protein [Shigella flexneri VA-6]
 gi|333011141|gb|EGK30555.1| tRNA synthetases class II family protein [Shigella flexneri K-272]
 gi|333012003|gb|EGK31388.1| tRNA synthetases class II family protein [Shigella flexneri K-304]
 gi|333012665|gb|EGK32045.1| tRNA synthetases class II family protein [Shigella flexneri K-227]
          Length = 325

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 7   WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  ID       
Sbjct: 124 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 161 PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 221 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 281 QNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 325


>gi|119469130|ref|ZP_01612114.1| putative fold recognizing lysyl-tRNA [Alteromonadales bacterium
           TW-7]
 gi|119447382|gb|EAW28650.1| putative fold recognizing lysyl-tRNA [Alteromonadales bacterium
           TW-7]
          Length = 324

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 164/346 (47%), Gaps = 30/346 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W    + +    L +R  I  ++RE+F     +E+++ SL  +   + H+ +F+T  + 
Sbjct: 5   LWAPSANIK---TLKQRAEILRTIREFFYVRDVMEVETPSLSAASVTDVHLASFNTSFMG 61

Query: 69  QD-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                  PLYLQTSPEF+ K+LLAAG   IF    A+RN E G  H PEFTMLEWYR   
Sbjct: 62  PRHAGGLPLYLQTSPEFAMKRLLAAGSGSIFQLCKAFRNEEAGSHHNPEFTMLEWYRPGF 121

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
               LM +   +++C   V                     IT  +AF +   +D      
Sbjct: 122 DEFALMDEMDELMQCVLNV----------------EPATRITYQDAFKQVLGLD------ 159

Query: 188 NPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
            P       L   A + G      ++     +   +   K+EP++G      +  +PA +
Sbjct: 160 -PLTASLDQLKAHACEHGFADIAKNETHKDTLLQLLFCMKVEPSIGQTKPCFVYHFPASQ 218

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA I   D R   RFELY  N+EL N  +EL +  EQ  RF+++ Q ++    +  P+
Sbjct: 219 AALAQICEHDERVAGRFELYYKNMELANGFNELTNATEQAKRFDEDNQYREAHGLKQVPM 278

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           D   +A L   +PQ SG+A+G DRLVML T  + I +VI     ++
Sbjct: 279 DSRLIAALEHGLPQCSGVALGIDRLVMLATNKDKIKDVIAFDVDRA 324


>gi|321223219|gb|EFX48289.1| Lysyl-tRNA synthetase-related protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
          Length = 325

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGSNLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   +                    E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDC----------------QPAESLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G    T +  
Sbjct: 161 ------PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID++ L  L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 275 PQQPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA 325


>gi|16767593|ref|NP_463208.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167994774|ref|ZP_02575865.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168244876|ref|ZP_02669808.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168263302|ref|ZP_02685275.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168822526|ref|ZP_02834526.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194447527|ref|YP_002048390.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|197250660|ref|YP_002149261.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197265733|ref|ZP_03165807.1| putative lysyl-tRNA synthetase homolog GenX [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|200388288|ref|ZP_03214900.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|207859493|ref|YP_002246144.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|20141820|sp|Q9ZJ12|SYK3_SALTY RecName: Full=Uncharacterized protein YjeA
 gi|238690032|sp|B5F2M2|SYK3_SALA4 RecName: Full=Uncharacterized protein YjeA
 gi|238690433|sp|B5R019|SYK3_SALEP RecName: Full=Uncharacterized protein YjeA
 gi|238690632|sp|B4TF92|SYK3_SALHS RecName: Full=Uncharacterized protein YjeA
 gi|16422907|gb|AAL23167.1| putative pyruvate oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|194405831|gb|ACF66050.1| putative lysyl-tRNA synthetase homolog GenX [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|197214363|gb|ACH51760.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197243988|gb|EDY26608.1| putative lysyl-tRNA synthetase homolog GenX [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|199605386|gb|EDZ03931.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205327413|gb|EDZ14177.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205336324|gb|EDZ23088.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205341109|gb|EDZ27873.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205347912|gb|EDZ34543.1| lysyl-tRNA synthetase homolog [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206711296|emb|CAR35674.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|261249439|emb|CBG27303.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267996677|gb|ACY91562.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301160836|emb|CBW20367.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312915445|dbj|BAJ39419.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|320088774|emb|CBY98532.1| putative lysyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|323132685|gb|ADX20115.1| superoxide dismutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|332991158|gb|AEF10141.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 325

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   +                    E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDC----------------QPAESLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G    T +  
Sbjct: 161 ------PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID++ L  L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 275 PQQPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA 325


>gi|157147871|ref|YP_001455190.1| lysyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166229783|sp|A8AMP1|SYK3_CITK8 RecName: Full=Uncharacterized protein YjeA
 gi|157085076|gb|ABV14754.1| hypothetical protein CKO_03677 [Citrobacter koseri ATCC BAA-895]
          Length = 325

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 163/351 (46%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMTEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGMNLYLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   E                    E ++  + F R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLEC----------------QPAESLSYQQVFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G    T +  
Sbjct: 161 ------PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYFKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID + L  L   MP  SG+A+G DRLVML  GA ++ EVI     ++
Sbjct: 275 PQQPIDNNLLEALKVGMPDCSGVALGVDRLVMLALGAESLAEVIAFTVDRA 325


>gi|81248010|gb|ABB68718.1| putative lysyl-tRNA synthetase [Shigella boydii Sb227]
          Length = 335

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 17  WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 73

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 74  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 133

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  ID       
Sbjct: 134 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEID------- 170

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 171 PLSADKTQLREVAAKLNLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 230

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 231 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRATRGLPQHPID 290

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 291 QNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 335


>gi|331660735|ref|ZP_08361667.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA206]
 gi|315297600|gb|EFU56877.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli MS 16-3]
 gi|331051777|gb|EGI23816.1| lysyl-tRNA synthetase-like protein GenX [Escherichia coli TA206]
          Length = 325

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 163/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 7   WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++                        E ++  +AF RY  ID       
Sbjct: 124 MYRLMNEVDDLLQ----------------QVLDGPAAESLSYQQAFLRYLEID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 161 PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 221 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 281 QNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 325


>gi|325579193|ref|ZP_08149149.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159428|gb|EGC71562.1| lysine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 333

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 105/338 (31%), Positives = 160/338 (47%), Gaps = 28/338 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W      +    LL R  I + +R++F E   +E+++  L      + H+  F+TE +  
Sbjct: 17  WQPSASIKN---LLARAKIIADIRQFFTERGLLEVETPVLSEFGVTDLHLSTFNTEFVAP 73

Query: 70  -DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            D + K L+L TSPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H  
Sbjct: 74  FDELSKTLWLSTSPEYHMKRLLAAGSGPIFQIGKVFRNEEAGNRHNPEFTMLEWYRPHFD 133

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++                        E ++    F  Y  +D       
Sbjct: 134 MYRLMNEVDDLLQ----------------QILDCKPAETLSYQFVFQEYVGLD------- 170

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P    R  L   A++       D+    +   +  E +EP +G      +  +P+ ++AL
Sbjct: 171 PLSATRQELVEVARKHNFMADEDEDRDTLLQFLFSEVVEPKIGQETPVAVYHFPSSQAAL 230

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A + P D R  +RFE Y   +EL N   EL D  EQ+HRFE++ + + +       ID  
Sbjct: 231 AQLSPEDSRVAERFEFYYKGLELANGFHELTDAREQQHRFEQDNRLRARAGLPQREIDHR 290

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FLA L   +P +SG+A+G DRL+M+  GA +I EVI  
Sbjct: 291 FLAALQAGIPNTSGVALGVDRLIMIALGAKSIKEVISF 328


>gi|238756164|ref|ZP_04617484.1| lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238705638|gb|EEP98035.1| lysyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 325

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 102/345 (29%), Positives = 165/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +EI++ ++  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEIETPAMSQATVTDIHLSPFETRFVGP 63

Query: 70  DHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGMTLYMMTSPEYHMKRLLAAGSGSIYQMGRSFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   + ++ +                 ++  +AF R+ ++D       
Sbjct: 124 MYRLMNEVDDLLQQVLDCSSAET----------------LSYQQAFLRHLDVD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  D    +   +    +EP++G +    +  +PA ++
Sbjct: 161 PLSADKAQLCEAAAKLDLSNIADTEDDRDTLLQLLFTVGVEPHIGRDKPAFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I   D R  +RFE+Y   +EL N   EL D  EQ  RFE++ + +  +     PID
Sbjct: 221 ALAEISTEDHRVAERFEVYFKGMELANGFHELTDANEQLKRFEQDNRRRSVLGLPQNPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              +  L   MP  SG+A+G DRLVML  GA  ++EVI  P  ++
Sbjct: 281 MHLIDALQHGMPDCSGVALGVDRLVMLALGAERLSEVIAFPVDRA 325


>gi|329296400|ref|ZP_08253736.1| poxB regulator PoxA [Plautia stali symbiont]
          Length = 325

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 166/345 (48%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+D+ ++  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRAAILAEIRRFFADRGVLEVDTPAMSQATITDIHLVPFQTRFVGP 63

Query: 70  DHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                + L+L TSPE+  K+LLAAG   I+     +RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGRDLWLMTSPEYHMKRLLAAGSGPIYQMGRCFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   E  + +                 ++  +AF R+  ID       
Sbjct: 124 MYRLMNEVDDLLQQVLECDSAES----------------LSYQQAFIRHLEID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A++ G       +D    +   + +  +EP +G++    +  +PA ++
Sbjct: 161 PLSADKAQLREAAEKLGEGELANREDDRDTLLQLLFMLGVEPKIGLDKLCFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I   D R  +RFE+Y   +EL N   EL D  EQR RFE++ + +       +PID
Sbjct: 221 ALAEISTEDHRVAERFEVYYKGVELANGFRELTDSREQRQRFEQDNRRRAARGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              L  L   MP  SG+A+G DRL+ML   A+ ++EVI  P  +S
Sbjct: 281 TYLLDALAHGMPACSGVALGVDRLIMLALKADALSEVIAFPVDRS 325


>gi|206580741|ref|YP_002240886.1| lysyl-tRNA synthetase homolog GenX [Klebsiella pneumoniae 342]
 gi|288937542|ref|YP_003441601.1| lysyl-tRNA synthetase-related protein GenX [Klebsiella variicola
           At-22]
 gi|290512281|ref|ZP_06551648.1| lysyl-tRNA synthetase GenX [Klebsiella sp. 1_1_55]
 gi|238064861|sp|B5Y345|SYK3_KLEP3 RecName: Full=Uncharacterized protein YjeA
 gi|206569799|gb|ACI11575.1| lysyl-tRNA synthetase homolog GenX [Klebsiella pneumoniae 342]
 gi|288892251|gb|ADC60569.1| lysyl-tRNA synthetase-related protein GenX [Klebsiella variicola
           At-22]
 gi|289775276|gb|EFD83277.1| lysyl-tRNA synthetase GenX [Klebsiella sp. 1_1_55]
          Length = 325

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 106/351 (30%), Positives = 168/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  + + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSAPI---PNLLKRAAVMAEIRRFFTDRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGLNLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR      +L+ +  ++++   E                    E ++  +AF R+ +ID 
Sbjct: 118 YRPCYDMYRLINEVDDLLQQVLEC----------------QPAESLSYQQAFQRHLDID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G +  T +  
Sbjct: 161 ------PLSADKTQLREVAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKDRPTFIYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I P D R  +RFE+Y   IEL N   EL D  EQR RFE++ +++     
Sbjct: 215 FPATQASLAQISPEDHRVAERFEVYYKGIELANGFHELTDAREQRLRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID + LA L   +P  SG+A+G DR+VML  GA +I EVI     ++
Sbjct: 275 PQQPIDNNLLAALEAGLPDCSGVALGVDRVVMLALGAESIGEVIAFTVDRA 325


>gi|16763166|ref|NP_458783.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29144645|ref|NP_807987.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213052294|ref|ZP_03345172.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213581491|ref|ZP_03363317.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|213855778|ref|ZP_03384018.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|289829994|ref|ZP_06547445.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
 gi|25009410|sp|Q8Z197|SYK3_SALTI RecName: Full=Uncharacterized protein YjeA
 gi|25529111|pir||AC1047 lysine-tRNA ligase (EC 6.1.1.6) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16505474|emb|CAD06824.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29140284|gb|AAO71847.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 325

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   +                    E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDC----------------QPAESLSYQQAFLRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G    T +  
Sbjct: 161 ------PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID++ L  L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 275 PQQPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA 325


>gi|332160011|ref|YP_004296588.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664241|gb|ADZ40885.1| lysyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 325

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 166/344 (48%), Gaps = 30/344 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFQTRFVGP 63

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGLTLYMMTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +  +                 E ++  +AF R+ +ID       
Sbjct: 124 MYRLMDEVDDLLQQILDCDSS----------------ERLSYQQAFLRHLDID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EP++G +    +  +PA ++
Sbjct: 161 PLSADKAQLREAAAKLDLSNIADTEEDRDTLLQLLFTVGVEPHIGRDKPAFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ  RFE++ + ++K     +PID
Sbjct: 221 SLAVISTEDHRVAERFEVYFKGIELANGFHELTDGDEQLKRFEQDNRSREKRGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            + +  L   +P  SG+A+G DRLVML  GA  +++VI  P  +
Sbjct: 281 MNLIDALKHGLPDCSGVALGVDRLVMLALGAEKLSDVIAFPVGR 324


>gi|56416139|ref|YP_153214.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197365065|ref|YP_002144702.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|81361574|sp|Q5PLH2|SYK3_SALPA RecName: Full=Uncharacterized protein YjeA
 gi|238690785|sp|B5BKG8|SYK3_SALPK RecName: Full=Uncharacterized protein YjeA
 gi|56130396|gb|AAV79902.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197096542|emb|CAR62151.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 325

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMTEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGMNLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   +                    E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDC----------------QPAESLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G    T +  
Sbjct: 161 ------PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID++ L  L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 275 PQQPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA 325


>gi|238787527|ref|ZP_04631325.1| lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238724314|gb|EEQ15956.1| lysyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 325

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 102/343 (29%), Positives = 165/343 (48%), Gaps = 30/343 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFQTRFVGP 63

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGLTLYMMTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +  + +                 ++  +AF R+ +ID       
Sbjct: 124 MYRLMNEVDDLLQQILDCNSAET----------------LSYQQAFLRHLDID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  D    +   +    +EP++G +    +  +PA ++
Sbjct: 161 PLSADKAQLREAAAKLDLSNIADTEDDRDTLLQLLFTVGVEPHIGRDKPAFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ  RFE++ + + K     +PID
Sbjct: 221 SLAVISTEDHRVAERFEVYFKGIELANGFHELTDGDEQLQRFEQDNRSRAKRGLPEHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + +A L   +P  SG+A+G DRLVML  GA  +++VI  P  
Sbjct: 281 MNLIAALKHGLPDCSGVALGVDRLVMLALGAEKLSDVIAFPVD 323


>gi|300715029|ref|YP_003739832.1| lysyl-tRNA synthetase (Lysine-tRNA ligase) [Erwinia billingiae
           Eb661]
 gi|299060865|emb|CAX57972.1| lysyl-tRNA synthetase (Lysine-tRNA ligase) [Erwinia billingiae
           Eb661]
          Length = 325

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 101/332 (30%), Positives = 166/332 (50%), Gaps = 27/332 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH-IRKPLYLQT 80
           LLKR  I + +R +F +   +E+++ ++  +   + H+  F T  +         LYL T
Sbjct: 16  LLKRAAIMAEIRRFFADRGVLEVETPAMSQATVTDVHLVPFQTRFVGPGAAQGLDLYLMT 75

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   IF    ++RN E G  H PEFTMLEWYR H    +LM +  +++
Sbjct: 76  SPEYHMKRLLAAGSGPIFQLCRSFRNEEAGRHHNPEFTMLEWYRPHYDMYRLMNEVDDLL 135

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   E A                  E ++  +AF R+  +D       P   D+  +   
Sbjct: 136 QQVLECA----------------PAETLSYQQAFIRHLEMD-------PLSADKTQMREV 172

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A++ G+      ++    +   + +  +EP +G +    +  +PA +++LA I   D R 
Sbjct: 173 AEKLGVGDLANREEDRDTLLQLLFMMGVEPQIGKDKPAFVYHFPASQASLAEISTEDHRV 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   IEL N   EL D  EQ+ RF+++ +++        PID + L  L   MP
Sbjct: 233 AERFEVYFKGIELANGFRELTDSREQKQRFDQDNRKRAASGLPQQPIDTNLLDALAHGMP 292

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             SG+A+G DR+VML   A++++EVI  P  +
Sbjct: 293 DCSGVALGVDRIVMLALKADSLSEVIAFPVDR 324


>gi|295098318|emb|CBK87408.1| lysyl-tRNA synthetase-related protein GenX [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 325

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 167/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   ++    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGMNLYLMTSPEYHMKRLLAAGCGPVYQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   + A                E E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDCA----------------EAETLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRV--AHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +     +++    +   +    +EP +G +  T +  
Sbjct: 161 ------PLSADKTQLREVAAKLDLSNVADNEEDRDTLLQLLFTFGVEPQIGKDRPTFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYFKGIELANGFHELTDAREQQQRFEQDNRKRNARGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID   L  L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 275 PQQPIDTHLLEALKAGLPDCSGVALGVDRLVMLALGAEHLGDVIAFTVDRA 325


>gi|238750058|ref|ZP_04611561.1| lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238711602|gb|EEQ03817.1| lysyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 332

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 100/351 (28%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           +  +     W           LLKR  I + +R +F +   +E+++ ++  +   + H+ 
Sbjct: 5   LTIMSDTASWQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLV 61

Query: 61  AFSTELIIQDHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
            F T  +         LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTM
Sbjct: 62  PFQTRFVGPGAADGLTLYMMTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAGRHHNPEFTM 121

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           LEWYR H    +LM +  ++++   +  + +                 ++  +AF R+ +
Sbjct: 122 LEWYRPHYDMYRLMNEVDDLLQQILDCNSAET----------------LSYQQAFLRHLD 165

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRV--AHDDTWSDIFSRILIEKIEPNLGINCCTI 237
           ID       P   D+  L   A +  +      ++    +   +    +EP++G +    
Sbjct: 166 ID-------PLSADKAQLREAAAKLDLSNIAETEEDRDTLLQLLFTVGVEPHIGRDKPAF 218

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  +PA +++LA I   D R  +RFE+Y   +EL N   EL D  EQ  RFE++ + + K
Sbjct: 219 VYHFPASQASLAVISSEDHRVAERFEVYFKGLELANGFHELTDGDEQLQRFEQDNRVRAK 278

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 PID + +A L   +P  SG+A+G DRLVML  GA  ++EVI  P 
Sbjct: 279 RGLPQNPIDMNLIAALKQGLPDCSGVALGVDRLVMLALGAERLSEVIAFPV 329


>gi|161984787|ref|YP_410546.2| lysyl-tRNA synthetase [Shigella boydii Sb227]
 gi|332087166|gb|EGI92300.1| tRNA synthetases class II family protein [Shigella boydii 3594-74]
          Length = 325

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 7   WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +                    E ++  +AF RY  ID       
Sbjct: 124 MYRLMNEVDDLLQQVLDC----------------PAAESLSYQQAFLRYLEID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EPN+G    T +  +PA ++
Sbjct: 161 PLSADKTQLREVAAKLNLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++       +PID
Sbjct: 221 SLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRATRGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +  L   MP  SG+A+G DRLVML  GA  + EVI     ++
Sbjct: 281 QNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA 325


>gi|242237924|ref|YP_002986105.1| lysyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242129981|gb|ACS84283.1| lysyl-tRNA synthetase-related protein GenX [Dickeya dadantii
           Ech703]
          Length = 325

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 167/345 (48%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I   +R +F +   +E+++ +L  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRASIMKEIRRFFSDRGMLEVETPALSQATVTDIHLFPFQTRFVGP 63

Query: 70  DHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGIELYMMTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRFHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   E  + ++                ++  +AF R+  +D       
Sbjct: 124 MYRLMNEVDDLLQQVLECDSAEM----------------LSYQQAFQRHLAVD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A++ G+    + ++    +   +    IEP++G +    +  +PA ++
Sbjct: 161 PLSADKAQLRDVAEKLGVGDVASQEEDRDTLLQLLFTVGIEPHIGRDKPAFVYHFPATQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I   D R  +RFE Y   IEL N   EL D  EQR RFE++ +++        PID
Sbjct: 221 ALAEISTEDHRVAERFEAYFKGIELANGFCELTDSHEQRQRFEQDNRKRAARGLPVQPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E  L+ L+  +P  SG+A+G DRL+ML   A +I +VI     ++
Sbjct: 281 EHLLSALSAGIPPCSGVALGVDRLIMLALNAESIGDVIAFTVERA 325


>gi|240947998|ref|ZP_04752416.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240297668|gb|EER48142.1| lysyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 327

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 103/328 (31%), Positives = 158/328 (48%), Gaps = 25/328 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYL 78
             LLKR  I   +R++F +   +E+++  L      + H+  FST+ +       KPLYL
Sbjct: 18  EHLLKRAKIMKEIRQFFSDRGVLEVETPVLSEFSVTDVHLSTFSTQFLSPFEREAKPLYL 77

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            TSPE+  K+LLAAG   I+     +RN E G  H PEFTMLEWYR +    +L+ +  +
Sbjct: 78  MTSPEYHMKRLLAAGSGAIYQLCKVFRNEEAGKRHNPEFTMLEWYRPYFDMYRLINEVDD 137

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++                        E  +    F  Y  +D       P    +  L 
Sbjct: 138 LLQ----------------QILDCEPAESYSYQFVFQTYVGLD-------PLSATKSQLV 174

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
            +A++ G++   D+    +   +  E +E N+G    T +  +P+ ++ALA +   D R 
Sbjct: 175 EKARKHGLQCDDDENRDTLLQFLFSEIVEANIGKERPTAVYHFPSTQAALAQVSSEDHRV 234

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           ++RFE Y   +EL N   EL D  EQ  RF  +  E++K+      +D  FLA L   MP
Sbjct: 235 SERFEFYYKGLELANGFHELDDAQEQIRRFNADNVEREKMGLPPQALDVRFLAALEAGMP 294

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWT 345
             SG+A+G DRL+ML  GA +I EVI  
Sbjct: 295 NCSGVALGVDRLIMLALGAEHIKEVISF 322


>gi|296100928|ref|YP_003611074.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055387|gb|ADF60125.1| lysyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 325

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 167/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     L+L TSPE+  K+LLAAG   ++    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGMNLWLMTSPEYHMKRLLAAGCGPVYQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   + +                E E ++  +AF RY  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDCS----------------EAETLSYQQAFQRYLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP +G +  T +  
Sbjct: 161 ------PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPQIGKDRPTFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID + LA L   +P  SG+A+G DRLVML  GA  + +VI     ++
Sbjct: 275 PQQPIDTNLLAALKAGLPDCSGVALGVDRLVMLALGAEQLGDVIAFTVDRA 325


>gi|332290050|ref|YP_004420902.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432946|gb|AEC18005.1| lysyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 325

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 100/325 (30%), Positives = 155/325 (47%), Gaps = 24/325 (7%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           LLKR  I + +R++FV+   +E+++  L      + H+  F TE       +K L+L TS
Sbjct: 19  LLKRAKIIADIRQFFVDRGLLEVETPILSEFSVTDVHLSTFQTEFTPPFDQKKTLHLITS 78

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE+  K+LLA G   IF     +RN E G  H PEFTMLEWYR      +L+ +  ++++
Sbjct: 79  PEYHMKRLLAEGSGPIFQICKVFRNEEAGKRHNPEFTMLEWYRPFFDMYRLINEVDDLLQ 138

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
                                   E ++    F  Y  +D       P    +  L  +A
Sbjct: 139 ----------------QILDCPPAESLSYQFVFQEYVGVD-------PLSASKAELVEKA 175

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +  G+  A  +    +   +  E +E N+G      +  +P+ ++ALA I   D R  +R
Sbjct: 176 KAQGLVNADMEGRDTLLQYLFSEVVEKNIGQERPIAVYHFPSAQAALAQISSEDHRVAER 235

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           FE Y   +EL N   EL D  EQ HRFE++   ++K++     +D  FLA L   MP  S
Sbjct: 236 FEFYYKGLELANGFHELTDANEQMHRFEQDNLLREKLHLPPQQMDSRFLAALKSGMPSCS 295

Query: 321 GIAMGFDRLVMLVTGANNINEVIWT 345
           G+A+G DRL+M+    +NI +VI  
Sbjct: 296 GVALGVDRLLMIALSTDNIEDVISF 320


>gi|284008646|emb|CBA75269.1| lysyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 326

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 170/344 (49%), Gaps = 27/344 (7%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F++   +E+++  L      + H+  F T+ I  
Sbjct: 7   WQPSASI---NNLLKRAKIIAEIRRFFIDRGVVEVETPILSKFTVTDIHLSPFETQFIAP 63

Query: 70  D-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LY+ TSPE+  K+LLAAG   I+    A+RN E+G  H PEFTMLEWYR H  
Sbjct: 64  VIADSTKLYMITSPEYHMKRLLAAGSGPIYQIIKAFRNEEEGRYHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +L+ +  ++++                        E I+  +AF RY NID       
Sbjct: 124 MYRLIDEVDDLLQ----------------QILDCQPTERISYQQAFQRYLNIDPLA---- 163

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSD-IFSRILIEKIEPNLGINCCTILDRYPAPESA 247
             + +R  L   A + G+  A  +   D +   +    +EPNLG +  T++  +PA ++A
Sbjct: 164 -LESERKQLRDAAVKLGLNNAETEEDKDVLLQFLFTMGVEPNLGKDKPTVIYHFPASQAA 222

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA I   D R  +RFE+Y   IEL N   EL D  EQR RFE + Q ++K+     PIDE
Sbjct: 223 LAEISKEDHRVAERFEVYFKGIELANGFRELTDAQEQRERFEHDNQIREKMGLPEQPIDE 282

Query: 308 DFLACLTEM-PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             LA L ++ P  SG+A+G DRLVML   A  I++VI     ++
Sbjct: 283 CLLAALDKVIPDCSGVALGIDRLVMLALNAEKISDVISFSIERA 326


>gi|156932390|ref|YP_001436306.1| lysyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|156530644|gb|ABU75470.1| hypothetical protein ESA_00166 [Cronobacter sakazakii ATCC BAA-894]
          Length = 355

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 31  MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 87

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   ++    ++RN E G  H PEFTMLEW
Sbjct: 88  TRFVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVYQLCRSFRNEEMGRHHNPEFTMLEW 147

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   E                    E I+  +AF R+  ID 
Sbjct: 148 YRPHYDMYRLMNEVDDLLQQVLEC----------------QPAETISYQQAFQRHLEID- 190

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G +    +  
Sbjct: 191 ------PLSADKTQLREVAAKLDLSNIADTEEDRDTLLQLLFSMGVEPHIGKDRPVFVYH 244

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA ++ALA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++ +   
Sbjct: 245 FPASQAALAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRLQRGL 304

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              P+D + L  L   +P  SG+A+G DRL+ML  GA ++ EVI     ++
Sbjct: 305 PQQPVDYNLLEALKVGLPDCSGVALGVDRLIMLALGAESLAEVIAFTVDRA 355


>gi|260599492|ref|YP_003212063.1| poxB regulator PoxA [Cronobacter turicensis z3032]
 gi|260218669|emb|CBA34009.1| Putative lysyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 325

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   ++    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVYQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   E                    E I+  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLEC----------------QPAETISYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G +    +  
Sbjct: 161 ------PLSADKTQLREVAAKLDLSNIADTEEDRDTLLQLLFSMGVEPHIGKDRPVFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA ++ALA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++ +   
Sbjct: 215 FPASQAALAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRLQRGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              P+D + L  L   +P  SG+A+G DRL+ML  GA ++ +VI     ++
Sbjct: 275 PQQPVDYNLLEALKAGLPDCSGVALGVDRLIMLALGAESLADVIAFTVDRA 325


>gi|161505152|ref|YP_001572264.1| lysyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189082341|sp|A9MFQ6|SYK3_SALAR RecName: Full=Uncharacterized protein YjeA
 gi|160866499|gb|ABX23122.1| hypothetical protein SARI_03289 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 325

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 163/351 (46%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASV---PNLLKRAAIMTEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGMNLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   +                    E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDC----------------QPAESLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G    T +  
Sbjct: 161 ------PLSADKTQLREAAAKLDVSNIADTEEDRDTLLQLLFTVGVEPHIGKEKPTFIYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID   L  L   MP  SG+A+G DRLVML  GA  + +VI     ++
Sbjct: 275 PQQPIDNHLLDALKAGMPDCSGVALGVDRLVMLALGAERLADVIAFTVDRA 325


>gi|227326231|ref|ZP_03830255.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 325

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 101/345 (29%), Positives = 169/345 (48%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I +++R +F +   +E+++ ++  +   +  +  F T  +  
Sbjct: 7   WQPSASV---ANLLKRASIIAAVRRFFTDRGVLEVETPAMSQATVTDVFLYPFQTRFVGP 63

Query: 70  DHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LYL TSPE+  K+LLAAG   IF    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGMTLYLMTSPEYHMKRLLAAGSGPIFQLCRSFRNEESGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +  + ++                ++  +AF R+  ID       
Sbjct: 124 MYRLMNEVDDLLQQVLDCESAEM----------------LSYQQAFLRHLEID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A++ G+      +D    +   +    +EP++G +    +  +PA ++
Sbjct: 161 PLSVDKAQLREAAEKLGLGDIACREDDRDSLVQMLFTFGVEPHIGRDKPAFVYHFPATQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQR RFE++ +++        PID
Sbjct: 221 SLAEISSEDHRVAERFEVYFKGIELANGFRELTDADEQRQRFEQDNRKRAARDLPQQPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E+ LA L   +P+ +G+A+G DRL+ML   A  +++VI     ++
Sbjct: 281 ENLLAALKHGLPECAGVALGVDRLIMLALNAERLSDVIAFSVDRA 325


>gi|283786838|ref|YP_003366703.1| lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282950292|emb|CBG89939.1| putative lysyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 325

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 164/351 (46%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     L+L TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGMSLWLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   E                    E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLEC----------------PAAESLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G      +  
Sbjct: 161 ------PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPAFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYFKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID + L  L   MP  SG+A+G DRLVML  GA ++ EVI     ++
Sbjct: 275 PQQPIDHNLLEALKVGMPDCSGVALGVDRLVMLALGAESLAEVIAFTVDRA 325


>gi|269137698|ref|YP_003294398.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267983358|gb|ACY83187.1| lysyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304557753|gb|ADM40417.1| lysyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 325

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 168/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W           LLKR  I S++R +F +   +E+D+ S+  +   + H+  F 
Sbjct: 1   MSDTASWQPSA---PVANLLKRASILSTIRRFFSDRGVLEVDTPSMSQATVTDVHLVPFQ 57

Query: 64  TELIIQD-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +         LYL TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEW
Sbjct: 58  THFVGPGVAQGMTLYLMTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   E  + +                 ++  +AF R+ ++D 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLECESAET----------------LSYQQAFIRHLDVD- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRV--AHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +     +++    +   +    +EP++G      +  
Sbjct: 161 ------PLSADKTQLREAAAKLDLSNVADNEEDRDTLLQLLFAFGVEPHIGKERPAFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   +EL N   EL D  EQR RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYRGVELANGFHELTDAAEQRLRFEQDNRKRAAAGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PIDE  LA L   MP SSG+A+G DRL+ML   A  ++EVI     ++
Sbjct: 275 PQQPIDEHLLAALEHGMPDSSGVALGVDRLIMLALSAERLSEVIAFSVDRA 325


>gi|3947886|gb|AAC82540.1| pyruvate oxidase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 325

 Score =  252 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 102/351 (29%), Positives = 165/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFGDRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LL AG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGINLYLMTSPEYHMKRLLEAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   +                    E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDC----------------QPAESLSYQQAFQRHLGID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G    T +  
Sbjct: 161 ------PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              P+D++ L  L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 275 AQQPMDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA 325


>gi|91976977|ref|YP_569636.1| lysine--tRNA ligase [Rhodopseudomonas palustris BisB5]
 gi|91683433|gb|ABE39735.1| Lysine--tRNA ligase [Rhodopseudomonas palustris BisB5]
          Length = 351

 Score =  252 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 169/341 (49%), Positives = 223/341 (65%), Gaps = 2/341 (0%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW+   +  R+PFL  R+ +  + R++F   +F E+++  LQ SPGNETH+ A  TE
Sbjct: 7   ASPWWDPARYLDRKPFLRARSAVTRAARDWFAAAEFAEVETAILQLSPGNETHLHAPRTE 66

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
               D   +  +L+TSPEF+CKKLLAAGEE+IF FA  +R+ E+G LH PEFTMLEWYRA
Sbjct: 67  FKGPDGELRTRFLRTSPEFACKKLLAAGEERIFEFARVFRDRERGRLHLPEFTMLEWYRA 126

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            E Y+ ++ DC  +I  AA       FSF+    +P +EPE +TVA AFAR+A IDL  T
Sbjct: 127 GEGYQTVIADCAALIALAARTTGIGQFSFRGRTADPQAEPEMLTVAAAFARFAGIDLLAT 186

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +   +     L    A +   RVA DD WSDIFS++L++ IEP LG    T+L  YPAPE
Sbjct: 187 IIGGEGDRDALARAAAAKV--RVADDDNWSDIFSKVLVDHIEPRLGEGRLTVLCEYPAPE 244

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     DPR  +RFE+YAC +EL N   EL D  EQR RF   M EK++ Y E YP+
Sbjct: 245 AALARTKADDPRVAERFEVYACGVELANGFGELTDAAEQRLRFTASMDEKERRYGERYPL 304

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           DEDFLA +  MP++SG+A+GFDRLVML  GA  I++V+WTP
Sbjct: 305 DEDFLAAVGRMPEASGVALGFDRLVMLAAGAMRIDQVVWTP 345


>gi|77359440|ref|YP_339015.1| fold recognizing lysyl-tRNA [Pseudoalteromonas haloplanktis TAC125]
 gi|123587784|sp|Q3IFP4|SYK3_PSEHT RecName: Full=Uncharacterized protein YjeA
 gi|76874351|emb|CAI85572.1| putative fold recognizing lysyl-tRNA [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 324

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 163/346 (47%), Gaps = 30/346 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W           L +R +I  S+RE+F     +E+++ SL  +   + H+ +F+T  + 
Sbjct: 5   LWAPSASI---ATLKQRAVILRSIREFFYARNVMEVETPSLSGASVTDIHLVSFNTRFVG 61

Query: 69  QD-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                   LYLQTSPEF+ K+LLAAG   IF    A+RN E G  H PEFTMLEWYR   
Sbjct: 62  PGHASGLELYLQTSPEFAMKRLLAAGSGPIFQLCKAFRNEEAGSHHNPEFTMLEWYRPGF 121

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
               LM +   +++   +VA                  E +T   AF +   +D      
Sbjct: 122 DEFALMAEIDELMQLILDVA----------------PSERLTYQHAFEQVLGLD------ 159

Query: 188 NPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
            P       L   A + G      ++     +   +   K+EP +G +    +  +PA +
Sbjct: 160 -PLTASLEQLQQLACEQGFADIAKNETHRDTLLQLLFCMKVEPTIGQHKPCFVYHFPASQ 218

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA I   D R   RFELY  N+EL N  +EL +  EQ  RF  + + +K+   +  P+
Sbjct: 219 AALAQICDHDSRVAGRFELYYKNMELANGFNELTNATEQAKRFNDDNEYRKQNGLKQVPM 278

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           D+  +A L   +   +G+A+G DRLVML T  +NI EVI    +++
Sbjct: 279 DKHLIAALEHGLAPCAGVALGIDRLVMLATQKSNIKEVIAFDVTRA 324


>gi|227113808|ref|ZP_03827464.1| lysyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 325

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 100/345 (28%), Positives = 169/345 (48%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I +++R +F +   +E+++ ++  +   +  +  F T  +  
Sbjct: 7   WQPSASV---ANLLKRASIIAAVRRFFTDRGVLEVETPAMSQATVTDIFLYPFQTRFVGP 63

Query: 70  DHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LYL TSPE+  K+LLAAG   IF    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGMTLYLMTSPEYHMKRLLAAGSGPIFQLCRSFRNEESGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +  + ++                ++  +AF R+  ID       
Sbjct: 124 MYRLMNEVDDLLQQVLDCESAEM----------------LSYQQAFLRHLEID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A++ G+      +D    +   +    +EP++G +    +  +PA ++
Sbjct: 161 PLSVDKAQLREAAEKLGLGDIACREDDRDSLVQMLFTFGVEPHIGRDKPAFVYHFPATQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   +EL N   EL D  EQR RFE++ +++        PID
Sbjct: 221 SLAEISSEDHRVAERFEVYFKGVELANGFRELTDADEQRQRFEQDNRKRAARDLPQQPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E+ LA L   +P+ +G+A+G DRL+ML   A  +++VI     ++
Sbjct: 281 ENLLAALKHGLPECAGVALGVDRLIMLALNAERLSDVIAFSVDRA 325


>gi|126459115|ref|YP_001055393.1| lysyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126248836|gb|ABO07927.1| lysyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 482

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 159/366 (43%), Gaps = 37/366 (10%)

Query: 2   HQIPSQPWW--NRD----FHYRR---------RPFLLKRNMIQSSLREYFVENQFIEIDS 46
             +P   W   +RD      YR          R  +  R  +  + RE      F+EI +
Sbjct: 134 QPLPE--WGKVDRDSPFYMRYRSVAMVLDLQLRWRIAARARLIQAFREAMWRRGFVEIPT 191

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             LQ   G     R F+T++     I +  YL+ SPE   K+ + AG  K+F     +RN
Sbjct: 192 PVLQPIYGGAA-ARPFTTKVW---AIDEEWYLRISPELYLKRYIIAGFPKVFEIGPQFRN 247

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEP 165
            +   LH PEF  LE Y+A+  Y ++MK    ++      V    +  ++  + N     
Sbjct: 248 EDIDALHNPEFWSLEAYQAYADYREIMKLTEEVVYEAIVAVLGTPVVKYREWSINFSPPW 307

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             IT+ +A   +   D     D+  +     + +  +     VA       +F +++ +K
Sbjct: 308 RRITLHDALREFGGEDPEKLTDDEIKQRLREMQVPLKVYNRGVA----LVKLFEKLVEKK 363

Query: 226 -IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +EP   +        YP   + L   +       +RFE +   +E+ NA  EL DP++Q
Sbjct: 364 LVEPTFVL-------DYPEESTPLCKPHREKKGLVERFEAFVGGLEIANAYTELNDPVKQ 416

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
              F +E +   K  +E +P+D DF+  L+  MP + G+ +G DRL M++T A +I +VI
Sbjct: 417 YEYFVREEELFPK--DEAHPLDWDFVEELSFGMPPTGGVGIGVDRLAMIITNAESIKDVI 474

Query: 344 WTPFSQ 349
             P  +
Sbjct: 475 PYPIVK 480


>gi|301155597|emb|CBW15065.1| predicted lysyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 327

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 105/338 (31%), Positives = 159/338 (47%), Gaps = 28/338 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LL R  I + +R++F E   +E+++  L      + H+  F+TE +  
Sbjct: 11  WQPSASI---QNLLARAKIIADIRQFFTERGLLEVETPVLSEFGVTDLHLSTFNTEFVAP 67

Query: 70  -DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            D + K L+L TSPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H  
Sbjct: 68  FDELSKTLWLSTSPEYHMKRLLAAGSGPIFQIGKVFRNEEAGNRHNPEFTMLEWYRPHFD 127

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++                        E ++    F  Y  +D       
Sbjct: 128 MYRLMNEVDDLLQ----------------QILDCKPAETLSYQFVFQEYVGLD------- 164

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P    R  L   A++       D+    +   +  E +EP +G      +  +P+ ++AL
Sbjct: 165 PLSATRQELVEAARKHNFMADEDEDRDTLLQFLFSEVVEPKIGQEAPVAVYHFPSSQAAL 224

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A + P D R  +RFE Y   +EL N   EL D  EQ+HRFE++ + ++K       ID  
Sbjct: 225 AQLSPEDSRVAERFEFYYKGLELANGFHELTDAREQQHRFEQDNRLREKAGLPQREIDHR 284

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            LA L   +P +SG+A+G DRL+M+  GA +I EVI  
Sbjct: 285 LLAALQAGIPNTSGVALGVDRLIMIALGAESIKEVISF 322


>gi|86750072|ref|YP_486568.1| tRNA synthetase, class II (D, K and N) [Rhodopseudomonas palustris
           HaA2]
 gi|86573100|gb|ABD07657.1| tRNA synthetase, class II (D, K and N) [Rhodopseudomonas palustris
           HaA2]
          Length = 351

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 173/341 (50%), Positives = 229/341 (67%), Gaps = 2/341 (0%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWWNRD +  R+PFL  R  +  + R++F    F E+++  LQ SPGNETH+ A  TE
Sbjct: 7   ASPWWNRDRYLDRQPFLRARGAVTRAARDWFATADFAEVETAILQLSPGNETHLHAPRTE 66

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
           L   D  R+  YL+TSPEF+CKKLLAAGE++IF FA  +R+ E+G LH PEFTMLEWYRA
Sbjct: 67  LKGPDGARRTRYLRTSPEFACKKLLAAGEQRIFEFARVFRDRERGRLHLPEFTMLEWYRA 126

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            E YE ++ DC+ +I  AA       F+ ++ +C+P +E E +TVA AF R+A IDL  T
Sbjct: 127 CERYEAVIADCVALIALAARTTGIGGFTLRDRSCDPQAEAELLTVAAAFERFAAIDLLAT 186

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +   D         +A  A +RVA DD WSDIFS++L+E +EP LG    T+L  YPAPE
Sbjct: 187 I--IDGEGDRDALARAAAAKVRVATDDNWSDIFSKVLVEHVEPRLGEGRMTVLCDYPAPE 244

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA     DPR  +RFE+YAC +EL N   EL D  EQR RF   M EK++ Y E YP+
Sbjct: 245 AALARTKAGDPRVAERFEVYACGVELANGFGELTDAAEQRARFTAAMDEKQRRYGERYPL 304

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           DEDFLA + +MP++SG+A+GFDRLVML  GA +I++V+WTP
Sbjct: 305 DEDFLAAVGQMPEASGVALGFDRLVMLAAGATSIDQVVWTP 345


>gi|154246471|ref|YP_001417429.1| lysine--tRNA ligase [Xanthobacter autotrophicus Py2]
 gi|154160556|gb|ABS67772.1| Lysine--tRNA ligase [Xanthobacter autotrophicus Py2]
          Length = 363

 Score =  251 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 182/347 (52%), Positives = 234/347 (67%), Gaps = 2/347 (0%)

Query: 3   QIPS-QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
             P+  PWW+R  H  RRPFLL R  + +++R       FIE+++ +LQ SPGNE H+ A
Sbjct: 16  PSPNPSPWWSRSVHADRRPFLLARGRMMAAIRARLAGEGFIEVETPALQVSPGNEAHLHA 75

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F+T+LI  D  R+ LYL+TSPEF+ KKLLAAGEE+IF FA  +RN E+G  H PEFT+LE
Sbjct: 76  FATDLIGPDGARRTLYLRTSPEFASKKLLAAGEEQIFEFARVFRNRERGMAHHPEFTLLE 135

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
           WYRA   Y +LM DC  ++ CAAE      F+++   C+PF+ PE +T+ EAFAR+A + 
Sbjct: 136 WYRAGAPYNRLMDDCAGLLACAAEAGGVSTFAWRGHTCDPFAAPERLTLEEAFARHAGMA 195

Query: 182 LGTTLDNP-DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           L T L  P ++PD       A   GIR A DDTW+DIFSR+L+EKIE  LG+   T+L  
Sbjct: 196 LATVLPAPGERPDPRPFAELAAAHGIRTAPDDTWADIFSRVLVEKIETRLGMGRPTVLCD 255

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP  E+ALA   P DPRF +RFELYAC +EL NA  EL D  EQR RFE+EM EK+++Y 
Sbjct: 256 YPVSEAALARPKPEDPRFAERFELYACGLELANAFGELTDADEQRRRFEEEMDEKERLYG 315

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E YPID DFLA L  MP +SG A+GFDRL +L +GA  I +V+W P 
Sbjct: 316 ERYPIDADFLAALAAMPPASGCALGFDRLAVLASGARRIEDVLWAPV 362


>gi|261823167|ref|YP_003261273.1| lysyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261607180|gb|ACX89666.1| lysyl-tRNA synthetase-related protein GenX [Pectobacterium wasabiae
           WPP163]
          Length = 325

 Score =  251 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 170/345 (49%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I +++R +F +   +E+++ ++  +   +  +  F T  +  
Sbjct: 7   WQPSASV---ANLLKRASIVAAVRRFFTDRGVLEVETPAMSQATVTDVFLYPFQTRFVGP 63

Query: 70  DHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LYL TSPE+  K+LLAAG   IF    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGMTLYLMTSPEYHMKRLLAAGSGPIFQLCRSFRNEESGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +  + ++                ++  +AF R+  ID       
Sbjct: 124 MYRLMNEVDDLLQQVLDCESAEM----------------LSYQQAFLRHLEID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A++ G+      +D    +   +    +EPN+G +    +  +PA ++
Sbjct: 161 PLSVDKAQLREAAEKLGLGDIACREDDRDSLVQMLFTFGVEPNIGRDKPAFVYHFPATQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQR RFE++ +++        PID
Sbjct: 221 SLAEISSEDHRVAERFEVYFKGIELANGFRELTDADEQRQRFEQDNRKRAARGLPQQPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E+ LA L   +P+ SG+A+G DRLVML   A ++++VI     ++
Sbjct: 281 ENLLAALKHGLPECSGVALGVDRLVMLALKAESLSDVIAFSVERA 325


>gi|157368667|ref|YP_001476656.1| lysyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980064|sp|A8G8T8|SYK3_SERP5 RecName: Full=Uncharacterized protein YjeA
 gi|157320431|gb|ABV39528.1| lysyl-tRNA synthetase-related protein GenX [Serratia proteamaculans
           568]
          Length = 325

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 99/345 (28%), Positives = 168/345 (48%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRAAILTEIRRFFADRGVLEVETPTMSQATVTDIHLFPFQTRFVGP 63

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGLTLYMMTSPEYHMKRLLAAGSGPIYQMGRSFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +  + +                 ++  +AF R+ +ID       
Sbjct: 124 MYRLMNEVDDLLQQVLDCDSAET----------------LSYQQAFLRHLDID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   ++  L   A +  +    D  +    +   +    +EP++G +    +  +PA ++
Sbjct: 161 PLSAEKAQLREAAAKLDLSNIADTEEDRDTLLQLLFTVGVEPHIGRDKPAFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ  RF ++ +++ +     +PID
Sbjct: 221 SLAEISTEDHRVAERFEVYFKGIELANGFRELTDSREQGQRFAQDNRKRAERGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            + L  L   MP+ SG+A+G DRLVML  GA +++EV+  P  ++
Sbjct: 281 NNLLDALQHGMPECSGVALGVDRLVMLALGAESLSEVLAFPVDRA 325


>gi|238918356|ref|YP_002931870.1| lysyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511522|sp|C5BDL9|SYK3_EDWI9 RecName: Full=Uncharacterized protein YjeA
 gi|238867924|gb|ACR67635.1| putative lysyl-tRNA synthetase-like protein GenX [Edwardsiella
           ictaluri 93-146]
          Length = 325

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 168/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W           LLKR  I S++R +F +   +E+D+ S+  +   + H+  F 
Sbjct: 1   MSDMASWQPSA---PVANLLKRASILSTIRRFFSDRGVLEVDTPSMSQATVTDVHLVPFQ 57

Query: 64  TELIIQD-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +         LYL TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEW
Sbjct: 58  THFVGPGVAQGMMLYLMTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   E  + +                 ++  +AF R+ ++D 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLECESAET----------------LSYQQAFIRHLDVD- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRV--AHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +     +++    +   +    +EP++G      +  
Sbjct: 161 ------PLSADKTQLREVAAKLDLSNVADNEEDRDTLLQLLFAFGVEPHIGKERPVFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   +EL N   EL D  EQR RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYRGVELANGFHELTDAAEQRQRFEQDNRKRAAAGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PIDE  LA L   MP SSG+A+G DRL+ML   A  ++EVI     ++
Sbjct: 275 PQQPIDEHLLAALEHGMPDSSGVALGVDRLIMLALSAERLSEVIAFSVDRA 325


>gi|21957329|gb|AAM84206.1|AE013664_1 putative lysyl-tRNA synthetase [Yersinia pestis KIM 10]
          Length = 332

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 100/351 (28%), Positives = 164/351 (46%), Gaps = 30/351 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           +  +     W           LLKR  I + +R +F +   +E+++ ++  +   + H+ 
Sbjct: 5   LTTMSDTASWQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLV 61

Query: 61  AFSTELIIQDHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
            F T  +         LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTM
Sbjct: 62  PFETRFVGPGAADGLTLYMMTSPEYHMKRLLAAGSGPIYQLGRSFRNEEAGRYHNPEFTM 121

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           LEWYR H    +LM +  ++++   +  + +                 ++  +AF R+ N
Sbjct: 122 LEWYRPHYDMYRLMNEVDDLLQQILDCNSAET----------------LSYQQAFLRHLN 165

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTI 237
           ID       P   ++  L   A +  +    D  +    +   +    +EP +G +    
Sbjct: 166 ID-------PLSAEKAQLREVAAKLDLSNIADTEEDRDTLLQLLFTVGVEPYIGRDKPAF 218

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ  RFE++ + + K
Sbjct: 219 IYHFPASQASLAEISTEDHRVAERFEVYFKGIELANGFRELTDGDEQLQRFEQDNRNRAK 278

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 PID + +A L   +P  SG+A+G DRLVML   A  +++VI  P 
Sbjct: 279 RGLPQNPIDMNLIAALKQGLPDCSGVALGVDRLVMLALNAERLSDVIAFPV 329


>gi|260772051|ref|ZP_05880968.1| lysyl-tRNA synthetase-related protein [Vibrio metschnikovii CIP
           69.14]
 gi|260612918|gb|EEX38120.1| lysyl-tRNA synthetase-related protein [Vibrio metschnikovii CIP
           69.14]
          Length = 324

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 108/349 (30%), Positives = 171/349 (48%), Gaps = 30/349 (8%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           SQP W       +   L +R  +  ++R++F E + +E+D+ ++  +   + H++ F T+
Sbjct: 2   SQPQWMPSASIAQ---LQQRARLLQNIRQFFAEREVLEVDTPAMSQATVTDIHLQTFQTQ 58

Query: 66  LIIQD-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
            +  D    K LYL TSPEF  K+LLAAG   I+    A+RN E G  H PEFT+LEWYR
Sbjct: 59  FVGPDYAAGKTLYLMTSPEFHMKRLLAAGSGSIYQINKAFRNEENGRYHNPEFTLLEWYR 118

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
               +  LM +   +++                        E IT  +AF +  N+    
Sbjct: 119 VGFDHHDLMDEVDALLQMILSTDTA----------------ERITYQDAFLQVLNV---- 158

Query: 185 TLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
               P +     L   A Q G+      +     +   +    +E ++G +    +  +P
Sbjct: 159 ---CPLEASLVELKQVAAQLGLSDIAEPEQDRDTLLQLLFSIGVEAHIGQHKPVFVYDFP 215

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A ++ALA +   DPR   RFE+Y   IEL N   EL D  EQR RFE++ Q++  +    
Sbjct: 216 ASQAALAKVNRNDPRVADRFEVYFKGIELANGFHELDDAAEQRKRFEQDNQKRIAMGLVA 275

Query: 303 YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            PIDE+ LA L   +P  +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 276 QPIDENLLAALTAGLPTCAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 324


>gi|261342821|ref|ZP_05970679.1| lysyl-tRNA synthetase [Enterobacter cancerogenus ATCC 35316]
 gi|288314863|gb|EFC53801.1| lysyl-tRNA synthetase [Enterobacter cancerogenus ATCC 35316]
          Length = 325

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   ++    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGMNLYLMTSPEYHMKRLLAAGCGPVYQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   + A                E E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDCA----------------EAETLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRV--AHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +      ++    +   +    +EP +G +  T +  
Sbjct: 161 ------PLSADKAQLRDAAAKLDLSNVAETEEDRDTLLQLLFTFGVEPQIGKDRPTFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRNARGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID + L  L   +P  SG+A+G DRLVML  GA  + +VI     ++
Sbjct: 275 PQQPIDVNLLEALKAGLPDCSGVALGVDRLVMLALGAEQLGDVIAFTVDRA 325


>gi|268590816|ref|ZP_06125037.1| lysyl-tRNA synthetase GenX [Providencia rettgeri DSM 1131]
 gi|291313596|gb|EFE54049.1| lysyl-tRNA synthetase GenX [Providencia rettgeri DSM 1131]
          Length = 325

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 101/331 (30%), Positives = 166/331 (50%), Gaps = 27/331 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH-IRKPLYLQT 80
           LL+R  I + +R +F +   +E+++ ++  +   + H+  F T  +         LYL T
Sbjct: 16  LLQRAKIIAEVRRFFTDRCVLEVETPAMSQATVTDIHLVPFETRFVGPGAAQGINLYLMT 75

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H    +L+ +  +++
Sbjct: 76  SPEYHMKRLLAAGSGPIYQLGRSFRNEEAGRHHNPEFTMLEWYRPHFDMYRLINEVDDLL 135

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   E  +                 E ++  +AF RY +ID       P   ++  L   
Sbjct: 136 QQVLECESA----------------ELLSYQQAFLRYLDID-------PLSAEKSELREV 172

Query: 201 AQQAGIRVAHDDTWSD--IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A +  +    D       +   +    +EP++G     ++  +PA +++LA I   D R 
Sbjct: 173 AARLDLSNIADQEEDKDTLLQLLFTMGVEPHIGKEKPAVVYHFPATQASLAVISTEDHRV 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   +EL N   EL D  EQR RFE++ +++  +   T PIDE  LA L   +P
Sbjct: 233 AERFEVYYKGMELANGFHELTDASEQRQRFEQDNRKRAAMGLPTAPIDEHLLAALEHGLP 292

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             SG+A+G DRL+M+   A+ I++VI  P +
Sbjct: 293 DCSGVAVGVDRLIMIALNADKISDVIAFPVT 323


>gi|318607432|emb|CBY28930.1| lysyl-tRNA synthetase-related protein [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 325

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 100/344 (29%), Positives = 165/344 (47%), Gaps = 30/344 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFQTRFVGP 63

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LY+ TSPE+  K+LLA G   I+    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGLTLYMMTSPEYHMKRLLAVGSGSIYQLGRSFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +  +                 E ++  +AF R+ +ID       
Sbjct: 124 MYRLMDEVDDLLQQILDCDSS----------------ERLSYQQAFLRHLDID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EP++G +    +  +PA ++
Sbjct: 161 PLSADKAQLREAAAKLDLSNIADTEEDRDTLLQLLFTVGVEPHIGRDKPAFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQ  RFE++ + ++K     +PID
Sbjct: 221 SLAVISTEDHRVAERFEVYFKGIELANGFHELTDGDEQLKRFEQDNRSREKRGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            + +  L   +P  SG+A+G DRLVML  GA  +++VI  P  +
Sbjct: 281 MNLIDALKHGLPDCSGVALGVDRLVMLALGAEKLSDVIAFPVGR 324


>gi|261344987|ref|ZP_05972631.1| lysyl-tRNA synthetase [Providencia rustigianii DSM 4541]
 gi|282567132|gb|EFB72667.1| lysyl-tRNA synthetase [Providencia rustigianii DSM 4541]
          Length = 325

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 102/331 (30%), Positives = 167/331 (50%), Gaps = 27/331 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH-IRKPLYLQT 80
           LL+R  I + +R +F +   +E+D+ ++  +   + H+  F T  +         LYL T
Sbjct: 16  LLQRAKIIAEIRRFFADRCVLEVDTPAMSQATVTDIHLVPFETRFVGPGAAQGINLYLMT 75

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   I+  + ++RN E G  H PEFTMLEWYR H    +L+ +  +++
Sbjct: 76  SPEYHMKRLLAAGSGPIYQMSRSFRNEEAGRHHNPEFTMLEWYRPHFDMYRLINEVDDLL 135

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   E  +                 E ++  +AF R+ NID       P   ++  L   
Sbjct: 136 QQVLECDSA----------------ELLSYQQAFLRHLNID-------PLSAEKSELRDV 172

Query: 201 AQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A +  +    D  +    +   +    +EP++G +   ++  +PA +++LA I   D R 
Sbjct: 173 AARLDLSNIADQEEDRDTLLQLLFTMGVEPHIGKDKPAVVYHFPATQASLAVISTEDHRV 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   +EL N   EL D  EQR RFE++ +++  +     PIDE  LA L   +P
Sbjct: 233 AERFEVYYKGMELANGFHELTDVHEQRQRFEQDNRKRAAMGLPIQPIDEHLLAALEHGLP 292

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             SG+A+G DRL+ML   A  I++VI  P +
Sbjct: 293 DCSGVAVGVDRLMMLALNAERISDVIAFPVT 323


>gi|205355106|ref|YP_002228907.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|238690493|sp|B5R9A5|SYK3_SALG2 RecName: Full=Uncharacterized protein YjeA
 gi|205274887|emb|CAR39953.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|326630263|gb|EGE36606.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 325

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   +                    E ++  +AF  +  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDC----------------QPAESLSYQQAFQGHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L     +  +    D  +    +   +L   +EP++G    T +  
Sbjct: 161 ------PLSADKTQLREAVAKLDLSNIADTEEDRDTLLQLLLTMGVEPHIGKEKPTFIYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID++ L  L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 275 PQQPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA 325


>gi|212711000|ref|ZP_03319128.1| hypothetical protein PROVALCAL_02069 [Providencia alcalifaciens DSM
           30120]
 gi|212686168|gb|EEB45696.1| hypothetical protein PROVALCAL_02069 [Providencia alcalifaciens DSM
           30120]
          Length = 325

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 101/331 (30%), Positives = 166/331 (50%), Gaps = 27/331 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH-IRKPLYLQT 80
           LL+R  I + +R +F +   +E+D+ ++  +   + H+  F T  +         LYL T
Sbjct: 16  LLQRAKIVAEIRRFFADRCVLEVDTPAMSQATVTDIHLVPFETRFVGPGAAQGINLYLMT 75

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H    +L+ +  +++
Sbjct: 76  SPEYHMKRLLAAGSGPIYQMCRSFRNEEAGRHHNPEFTMLEWYRPHFDMYRLINEVDDLL 135

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   E  +                 E ++  +AF R+ +ID       P   ++  L   
Sbjct: 136 QQVLECESA----------------ELLSYQQAFLRHLDID-------PLSAEKSELREV 172

Query: 201 AQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A +  +    D  +    +   +    +EP++G     ++  +PA +++LA I   D R 
Sbjct: 173 AARLDLSNVADQEEDRDTLLQLLFTMGVEPHIGKEKPAVVYHFPATQASLAVISTEDHRV 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   +EL N   EL D  EQR RFE++ +++  +     PIDE+ LA L   +P
Sbjct: 233 AERFEVYYKGMELANGFHELTDVSEQRQRFEQDNRKRAAMGLPVQPIDENLLAALEHGLP 292

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             SG+A+G DRL+ML   A  I++VI  P +
Sbjct: 293 ACSGVAVGVDRLIMLALNAERISDVIAFPVT 323


>gi|311087468|gb|ADP67548.1| lysyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon
           pisum)]
          Length = 350

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 27/332 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK-PLYLQT 80
           L+KR+ I S++R +F +   +E+++  L  S   + H+ +F T  I  D+I +  L+L T
Sbjct: 41  LIKRSNIISNIRLFFSKKNILEVETPILSRSTVTDVHLTSFETNYISSDNIDELKLWLTT 100

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLA+    I+   H++RN E G  H PEFTMLEWY+   S ++ +       
Sbjct: 101 SPEYHMKRLLASESGSIYQICHSFRNKELGRYHNPEFTMLEWYQPFCSMKKFI------- 153

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
                    K            ++ + ++  + F  +  ID       P   +   L+  
Sbjct: 154 ---------KEIDIFLQIILKCNKSDKVSYQDLFIDFLKID-------PLCANLLELHQI 197

Query: 201 AQQAGIRV--AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           +++  +      ++  + +   +   KIEPN+G      +  +PA +++LA I   DPR 
Sbjct: 198 SKKLKLDHLTHSENNLNKLIQLLFTLKIEPNIGKEKPLFVYHFPAEQASLAAINSKDPRI 257

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
           ++RFE++   IEL N   EL+D  EQ+ RF ++ +E++ +      ID  FL+ L   +P
Sbjct: 258 SERFEIFFKGIELGNGFYELIDVNEQKKRFIRDNKERRSMNLPIRKIDNFFLSALSYGLP 317

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             SG+A+G DRL+ML+    +I+EVI  P  +
Sbjct: 318 PCSGVAIGLDRLIMLILNKKSIHEVIAFPVDR 349


>gi|332534313|ref|ZP_08410156.1| lysyl-tRNA synthetase-like protein [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036223|gb|EGI72696.1| lysyl-tRNA synthetase-like protein [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 324

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 104/346 (30%), Positives = 159/346 (45%), Gaps = 30/346 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W           L +R  I  S+RE+F     +E+++ SL  +   + H+ +F+T  + 
Sbjct: 5   LWAPSASI---ETLKQRAAILRSIREFFYARDVMEVETPSLSSASVTDVHLASFNTTFVG 61

Query: 69  QD-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                  PL+LQTSPEF+ K+LLAAG   IF    A+RN E G  H PEFTMLEWYR   
Sbjct: 62  PGHAGGLPLFLQTSPEFAMKRLLAAGSGAIFQLCKAFRNEEAGSHHNPEFTMLEWYRPGF 121

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
               LM +   ++R   +V                     +T  +AF +   +D      
Sbjct: 122 DEFALMDEMDELMRLVLDV----------------EPATRLTYQQAFEQALGLD------ 159

Query: 188 NPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
            P   +   L   A + G      ++     +   +   K+EP +G +    +  +PA +
Sbjct: 160 -PLTANLEQLKQLACEQGFADIAKNETHKDTLLQLLFCMKVEPTIGQDKPCFVYHFPASQ 218

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA I   D R   RFELY  N+EL N  +EL +  EQ  RF ++   + +   +  P+
Sbjct: 219 AALAQICEHDTRVAGRFELYYKNMELANGFNELTNASEQAKRFNEDNAYRAENGLKQVPM 278

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           D   +  L   +PQ +G+A+G DRLVML T    I +VI     ++
Sbjct: 279 DTRLIKALEHGLPQCAGVALGIDRLVMLATNKEKIKDVIAFDMQRA 324


>gi|15617172|ref|NP_240385.1| lysyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|11135234|sp|P57642|SYK3_BUCAI RecName: Full=Uncharacterized protein YjeA
 gi|25528943|pir||G84997 lysine-tRNA ligase (EC 6.1.1.6) [imported] - Buchnera sp.  (strain
           APS)
 gi|10039237|dbj|BAB13271.1| hypothetical lysyl-tRNA synthetase homolog [Buchnera aphidicola
           str. APS (Acyrthosiphon pisum)]
          Length = 324

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 99/332 (29%), Positives = 170/332 (51%), Gaps = 27/332 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK-PLYLQT 80
           L+KR+ I S++R +F +   +E+++  L  S   + H+ +F T  I  D+I +  L+L T
Sbjct: 15  LIKRSNIISNIRLFFSKKNILEVETPILSRSTVTDVHLTSFETNYISSDNIDELKLWLTT 74

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLA+    I+   H++RN E G  H PEFTMLEWY+   S ++ +       
Sbjct: 75  SPEYHMKRLLASESGSIYQICHSFRNKEIGRYHNPEFTMLEWYQPFCSMKKFI------- 127

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
                    K            ++ + ++  + F  +  ID       P   +   L+  
Sbjct: 128 ---------KEIDIFLQIILKCNKSDKVSYQDLFIDFLKID-------PLCTNLLELHQI 171

Query: 201 AQQAGIRV--AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           +++  +      ++  + +   +   KIEPN+G      +  +PA +++LA I   DPR 
Sbjct: 172 SKKLKLDHLTHSENNLNKLIQLLFTLKIEPNIGKEKPLFVYHFPAEQASLAAINLKDPRI 231

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
           ++RFE++   IEL N   EL+D  EQ+ RF ++ +E++ +   T  ID  FL+ L   +P
Sbjct: 232 SERFEIFFKGIELGNGFYELIDVNEQKKRFIRDNKERRSMNLPTRKIDNFFLSALSYGLP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             SG+A+G DRL+ML+    +I+EVI  P  +
Sbjct: 292 PCSGVAIGLDRLIMLILNKKSIHEVIAFPVDR 323


>gi|33151303|ref|NP_872656.1| lysyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|38605186|sp|Q7VPM9|SYK3_HAEDU RecName: Full=Uncharacterized protein YjeA
 gi|33147523|gb|AAP95045.1| lysine--tRNA ligase [Haemophilus ducreyi 35000HP]
          Length = 327

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 105/333 (31%), Positives = 163/333 (48%), Gaps = 25/333 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH-IRKPLYL 78
             LLKR+ I + +R++F +   +E+++ +L      + H+  FSTE +       K L+L
Sbjct: 18  QTLLKRSKIMAEIRQFFTDRGVLEVETPALSEYSVTDVHLSTFSTEFLSPFAKQAKTLHL 77

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            TSPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H    +L+ +  +
Sbjct: 78  ITSPEYHMKRLLAAGSSSIFQLCRVFRNEESGKRHNPEFTMLEWYRPHFDMYRLINEVDD 137

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++                        E  +    F  Y  +D       P    R  L 
Sbjct: 138 LLQ----------------QILDCEPIESYSYQFVFQTYVGLD-------PLSASRAQLV 174

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
            +A++ G     D+    +   +  E +E N+G    T +  +P+ ++ALA I   D R 
Sbjct: 175 EKARKHGFACEEDENRDTLLQFLFSEIVEANIGQERPTTVYHFPSSQAALAQISSEDHRV 234

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   +EL N   EL D  EQ  RFE++ Q ++++     P+D  FLA L   +P
Sbjct: 235 AERFEIYYKGLELANGFHELNDAKEQIRRFERDNQLREQMNLPPQPLDMRFLAALKAGIP 294

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             SG+A+G DRL+ML   AN+I EV+     ++
Sbjct: 295 NCSGVALGVDRLIMLALNANHIQEVMAFGVERA 327


>gi|188535095|ref|YP_001908892.1| lysyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238689686|sp|B2VCV6|SYK3_ERWT9 RecName: Full=Uncharacterized protein YjeA
 gi|188030137|emb|CAO98023.1| Putative lysyl-tRNA synthetase (Lysine-tRNA ligase) [Erwinia
           tasmaniensis Et1/99]
          Length = 325

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 107/350 (30%), Positives = 166/350 (47%), Gaps = 30/350 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F 
Sbjct: 1   MSDTASWQPSASI---ANLLKRAAIMAEIRRFFADRGVLEVETPAMSQATVTDVHLFPFQ 57

Query: 64  TELIIQDHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +         LYL TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGAAAGIDLYLMTSPEYHMKRLLAAGSGPIYQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +L+ +  ++++   E A                  E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLINEVDDLLQQVLECA----------------PAETLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   AQ+ G       ++    +   + +  +EP +G      +  
Sbjct: 161 ------PLSADKAQLREVAQKLGAGDLANREEDRDTLLQLLFVLGVEPEIGKEKPAFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA ++ALA I P D R  +RFE+Y   IEL N   EL D  EQR RFE++ +++     
Sbjct: 215 FPATQAALAEISPEDHRVAERFEVYFKGIELANGFRELTDSREQRQRFEQDNRKRAAAGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              PID   L  L+  MP+SSG+A+G DRLVML   A  +++VI     +
Sbjct: 275 PQQPIDTYLLDALSAGMPESSGVALGVDRLVMLALKAEQLSDVIAFTVDR 324


>gi|257465041|ref|ZP_05629412.1| lysyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450701|gb|EEV24744.1| lysyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 327

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 102/328 (31%), Positives = 158/328 (48%), Gaps = 25/328 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYL 78
             LLKR  I   +R++F +   +E+++  L      + H+  FST+ +       KPLYL
Sbjct: 18  EHLLKRAKIMKEIRQFFSDRGVLEVETPVLSEFSVTDVHLSTFSTQFLSPFEREAKPLYL 77

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            TSPE+  K+LLAAG   I+     +RN E G  H PEFTMLEWYR +    +L+ +  +
Sbjct: 78  MTSPEYHMKRLLAAGSGAIYQLCKVFRNEEAGKRHNPEFTMLEWYRPYFDMYRLINEVDD 137

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++                        E  +    F  Y  +D       P    +  L 
Sbjct: 138 LLQ----------------QILDCEPAESYSYQFVFQTYVGLD-------PLSATKSQLV 174

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
            +A++ G++   D+    +   +  E +E N+G    T +  +P+ ++ALA +   D R 
Sbjct: 175 EKARKHGLQCDDDENRDTLLQFLFSEIVEANIGKERPTAVYHFPSTQAALAQVSSEDHRV 234

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           ++RFE Y   +EL N   EL D  EQ  RF  +  E++K+      +D  FLA L   +P
Sbjct: 235 SERFEFYYKGLELANGFHELDDAQEQIRRFNADNVEREKMGLPPQALDVRFLAALEAGIP 294

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWT 345
             SG+A+G DRL+ML  GA +I EVI  
Sbjct: 295 NCSGVALGVDRLIMLALGAEHIKEVISF 322


>gi|291615961|ref|YP_003518703.1| PoxA [Pantoea ananatis LMG 20103]
 gi|291150991|gb|ADD75575.1| PoxA [Pantoea ananatis LMG 20103]
          Length = 349

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 102/332 (30%), Positives = 166/332 (50%), Gaps = 27/332 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD-HIRKPLYLQT 80
           L+KR  I + +R +F +   +E+D+ ++  +   + H+  F T  +       + L+L T
Sbjct: 40  LIKRAAIIAEVRRFFADRGVLEVDTPAMSQATITDIHLVPFQTRFVGPGLSEGRDLWLMT 99

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H    +LM +  +++
Sbjct: 100 SPEYHMKRLLAAGSGPIYQMGRSFRNEEAGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLL 159

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   E  + +                 ++  +AF R+  +D       P   D+  L   
Sbjct: 160 QQVLECDSAES----------------LSYQQAFIRHLELD-------PLSADKAQLREA 196

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A++ G     + ++    +   + +  +EP +G +    +  +PA ++ALA I   D R 
Sbjct: 197 AEKLGEGELASREEDRDTLLMLLFMLGVEPKIGQDKPCFIYHFPASQAALAEISTEDHRV 256

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   IEL N   EL D  EQR RFE++ + +       +PID   LA L   MP
Sbjct: 257 AERFEVYYKGIELANGFRELTDSREQRQRFEQDNRRRAARGLPQHPIDHYLLAALEHGMP 316

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             SG+A+G DRL+ML   A +++EVI  P  +
Sbjct: 317 ACSGVALGVDRLIMLALKAESLSEVIAFPVDR 348


>gi|292489634|ref|YP_003532524.1| putative lysyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292898150|ref|YP_003537519.1| lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291197998|emb|CBJ45100.1| putative lysyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291555071|emb|CBA23169.1| putative lysyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312173810|emb|CBX82064.1| putative lysyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 325

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 108/350 (30%), Positives = 164/350 (46%), Gaps = 30/350 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F 
Sbjct: 1   MSDTASWQPSASI---ANLLKRATILAEIRRFFADRGVLEVETPAMSQATVTDVHLFPFQ 57

Query: 64  TELIIQDHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +         LYL TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGAAAGVDLYLMTSPEYHMKRLLAAGSGPIYQLCRSFRNEEMGRYHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   E A                  E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLECA----------------PAETLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A++ G       ++    +   + +  +EP +G      +  
Sbjct: 161 ------PLSADKAQLREVAEKLGAADLANREEDRDTLLQLLFVLGVEPEIGKEKPAFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA ++ALA I P D R  +RFE+Y   IEL N   EL D  EQR RFE++  ++     
Sbjct: 215 FPASQAALAEISPEDHRVAERFEVYFKGIELANGFRELTDSREQRQRFEQDNHKRAVAGL 274

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              PID   L  L   MPQSSG+A+G DRLVML   A  +++VI     +
Sbjct: 275 PQQPIDTYLLDALAEGMPQSSGVALGVDRLVMLALKAERLSDVIAFTVDR 324


>gi|149910192|ref|ZP_01898838.1| lysyl-tRNA synthetase [Moritella sp. PE36]
 gi|149806778|gb|EDM66742.1| lysyl-tRNA synthetase [Moritella sp. PE36]
          Length = 324

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 162/345 (46%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W     +     L  R  + + +RE+F     +E+D+ +L  +   + H+ AFST  +  
Sbjct: 6   WQPSASF---NALRARAKVLNVIREFFATRDVLEVDTPALSQAAVTDVHLDAFSTVFVGP 62

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +     LYLQTSPEF  K+LLAAG   I+  + ++RN E G  H PEFTMLEWYR    
Sbjct: 63  GYSQGLTLYLQTSPEFHMKRLLAAGSGCIYQISKSFRNEEAGRHHNPEFTMLEWYRLGFD 122

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           + QLM +   ++        +                +  T   AF ++  +D       
Sbjct: 123 HFQLMDEMSELLTLVLGSGKE----------------QRFTYQNAFKQFLQLD------- 159

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P       L   A+  G+   + ++     I   +    +E  +G +    +  +PA ++
Sbjct: 160 PLTASMDELRQAAKPYGVYDVLENEPDRDTILQLLFYVGVESQIGQDVPCFIYDFPASQA 219

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P D R  +RFE+Y   IEL N   EL D  EQ  RF+ +  ++K +     PID
Sbjct: 220 ALARISPQDSRVAERFEVYFKGIELANGFHELADAKEQLRRFKADNSKRKTMALPEQPID 279

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              +  L    P  +G+A+G DRLVML T AN+++EVI  P  ++
Sbjct: 280 HHLIDALTAGFPDCAGVALGIDRLVMLATDANSLDEVIAFPTPRA 324


>gi|327396213|dbj|BAK13635.1| putative lysyl-tRNA synthetase PoxA [Pantoea ananatis AJ13355]
          Length = 325

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 102/332 (30%), Positives = 166/332 (50%), Gaps = 27/332 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD-HIRKPLYLQT 80
           L+KR  I + +R +F +   +E+D+ ++  +   + H+  F T  +       + L+L T
Sbjct: 16  LIKRAAIIAEVRRFFADRGVLEVDTPAMSQATITDIHLVPFQTRFVGPGLSEGRDLWLMT 75

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H    +LM +  +++
Sbjct: 76  SPEYHMKRLLAAGSGPIYQMGRSFRNEEAGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLL 135

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   E  + +                 ++  +AF R+  +D       P   D+  L   
Sbjct: 136 QQVLECDSAES----------------LSYQQAFIRHLELD-------PLSADKAQLREA 172

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A++ G     + ++    +   + +  +EP +G +    +  +PA ++ALA I   D R 
Sbjct: 173 AEKLGEGELASREEDRDTLLMLLFMLGVEPKIGQDKPCFIYHFPASQAALAEISTEDHRV 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   IEL N   EL D  EQR RFE++ + +       +PID   LA L   MP
Sbjct: 233 AERFEVYYKGIELANGFRELTDSREQRQRFEQDNRRRAARGLPQHPIDHYLLAALEHGMP 292

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             SG+A+G DRL+ML   A +++EVI  P  +
Sbjct: 293 ACSGVALGVDRLIMLALKAESLSEVIAFPVDR 324


>gi|45440371|ref|NP_991910.1| lysyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
 gi|51594766|ref|YP_068957.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108809912|ref|YP_653828.1| lysyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108813469|ref|YP_649236.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145600860|ref|YP_001164936.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|150260594|ref|ZP_01917322.1| putative lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153949624|ref|YP_001402619.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|161484883|ref|NP_667955.2| lysyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|162421074|ref|YP_001605290.1| lysyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165926674|ref|ZP_02222506.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936482|ref|ZP_02225050.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011859|ref|ZP_02232757.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166213985|ref|ZP_02240020.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167400570|ref|ZP_02306079.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167419045|ref|ZP_02310798.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423148|ref|ZP_02314901.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167469169|ref|ZP_02333873.1| hypothetical protein YpesF_15064 [Yersinia pestis FV-1]
 gi|170026026|ref|YP_001722531.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186893773|ref|YP_001870885.1| lysyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218927565|ref|YP_002345440.1| lysyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229836621|ref|ZP_04456787.1| predicted lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229840233|ref|ZP_04460392.1| predicted lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842311|ref|ZP_04462466.1| predicted lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229903950|ref|ZP_04519063.1| predicted lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270489062|ref|ZP_06206136.1| lysyl-tRNA synthetase-like protein GenX [Yersinia pestis KIM D27]
 gi|294502471|ref|YP_003566533.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|25009411|sp|Q8ZIX3|SYK3_YERPE RecName: Full=Uncharacterized protein YjeA
 gi|81640579|sp|Q66FC6|SYK3_YERPS RecName: Full=Uncharacterized protein YjeA
 gi|123072499|sp|Q1C0Y9|SYK3_YERPA RecName: Full=Uncharacterized protein YjeA
 gi|123246211|sp|Q1CEE4|SYK3_YERPN RecName: Full=Uncharacterized protein YjeA
 gi|166229789|sp|A4TRQ1|SYK3_YERPP RecName: Full=Uncharacterized protein YjeA
 gi|166980065|sp|A7FMZ1|SYK3_YERP3 RecName: Full=Uncharacterized protein YjeA
 gi|238687245|sp|A9QYP2|SYK3_YERPG RecName: Full=Uncharacterized protein YjeA
 gi|238688466|sp|B1JMQ1|SYK3_YERPY RecName: Full=Uncharacterized protein YjeA
 gi|238691357|sp|B2K1Z3|SYK3_YERPB RecName: Full=Uncharacterized protein YjeA
 gi|45435227|gb|AAS60787.1| putative lysyl-tRNA synthetase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51588048|emb|CAH19654.1| putative lysyl-tRNA synthetase [Yersinia pseudotuberculosis IP
           32953]
 gi|108777117|gb|ABG19636.1| lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108781825|gb|ABG15883.1| putative lysyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115346176|emb|CAL19044.1| putative lysyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145212556|gb|ABP41963.1| lysyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149290002|gb|EDM40079.1| putative lysyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152961119|gb|ABS48580.1| lysyl-tRNA synthetase-like protein [Yersinia pseudotuberculosis IP
           31758]
 gi|162353889|gb|ABX87837.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis Angola]
 gi|165915598|gb|EDR34207.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165921297|gb|EDR38521.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989218|gb|EDR41519.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166204780|gb|EDR49260.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166963039|gb|EDR59060.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049938|gb|EDR61346.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167057318|gb|EDR67064.1| lysyl-tRNA synthetase homolog GenX [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169752560|gb|ACA70078.1| lysyl-tRNA synthetase-related protein GenX [Yersinia
           pseudotuberculosis YPIII]
 gi|186696799|gb|ACC87428.1| lysyl-tRNA synthetase-related protein GenX [Yersinia
           pseudotuberculosis PB1/+]
 gi|229679720|gb|EEO75823.1| predicted lysyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229690621|gb|EEO82675.1| predicted lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229696599|gb|EEO86646.1| predicted lysyl-tRNA synthetase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229706305|gb|EEO92313.1| predicted lysyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262360501|gb|ACY57222.1| lysyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262364448|gb|ACY61005.1| lysyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270337566|gb|EFA48343.1| lysyl-tRNA synthetase-like protein GenX [Yersinia pestis KIM D27]
 gi|294352930|gb|ADE63271.1| lysyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320013773|gb|ADV97344.1| putative lysyl-tRNA synthetase [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 325

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 163/348 (46%), Gaps = 30/348 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F 
Sbjct: 1   MSDTASWQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFE 57

Query: 64  TELIIQDHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +         LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGAADGLTLYMMTSPEYHMKRLLAAGSGPIYQLGRSFRNEEAGRYHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   +  + +                 ++  +AF R+ NID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQILDCNSAET----------------LSYQQAFLRHLNID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   ++  L   A +  +    D  +    +   +    +EP +G +    +  
Sbjct: 161 ------PLSAEKAQLREVAAKLDLSNIADTEEDRDTLLQLLFTVGVEPYIGRDKPAFIYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ  RFE++ + + K   
Sbjct: 215 FPASQASLAEISTEDHRVAERFEVYFKGIELANGFRELTDGDEQLQRFEQDNRNRAKRGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              PID + +A L   +P  SG+A+G DRLVML   A  +++VI  P 
Sbjct: 275 PQNPIDMNLIAALKQGLPDCSGVALGVDRLVMLALNAERLSDVIAFPV 322


>gi|308189053|ref|YP_003933184.1| lysyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308059563|gb|ADO11735.1| putative lysyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 325

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 167/344 (48%), Gaps = 30/344 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+D+ ++  +   + H+  F T  +  
Sbjct: 7   WQPSASI---ANLLKRAAILAEVRRFFADRGVLEVDTPAMSQATITDIHLVPFQTRFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                + L+L TSPE+  K+LLAAG   I+  A ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAAQGRDLWLMTSPEYHMKRLLAAGSGPIYQMARSFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   E  + +                 ++  +AF R+ ++D       
Sbjct: 124 MYRLMNEVDDLMQQVLECDSAES----------------LSYQQAFIRHLDLD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A++ G       ++    +   + +  +EP +G +    +  +PA ++
Sbjct: 161 PLSADKAQLREAAEKLGEGELARAEEDRDTLLMLLFMLGVEPKIGQDKPCFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I   D R  +RFE+Y   IEL N   EL D  EQR RFE++ + +       +PID
Sbjct: 221 ALAEISTEDHRVAERFEVYYKGIELANGFRELTDSREQRQRFEQDNRRRAARGLPVHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              L  L   MP  SG+A+G DRL+ML   A +++EVI  P  +
Sbjct: 281 TYLLDALAHGMPACSGVALGIDRLIMLALKAESLSEVIAFPVDR 324


>gi|310765345|gb|ADP10295.1| lysyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 325

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 107/350 (30%), Positives = 164/350 (46%), Gaps = 30/350 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F 
Sbjct: 1   MSDTASWQPSASI---ANLLKRAAIMAEIRRFFADRGVLEVETPAMSQATVTDVHLFPFQ 57

Query: 64  TELIIQDHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +         LYL TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGAAAGVDLYLMTSPEYHMKRLLAAGSGPIYQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   E A                  E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLECA----------------PAETLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A++ G       ++    +   + +  +EP +G      +  
Sbjct: 161 ------PLSADKAQLREAAEKLGAGDLAHREEDRDTLLQLLFVLGVEPEIGKEKPAFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA ++ALA I P D R  +RFE+Y   IEL N   EL D  EQR RFE++ +++     
Sbjct: 215 FPATQAALAEISPEDHRVAERFEVYFKGIELANGFRELTDSREQRQRFEQDNRKRAAAGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              PID   L  L   MP SSG+A+G DRLVML   A  +++VI     +
Sbjct: 275 PQQPIDNYLLEALAGGMPDSSGVALGVDRLVMLALKAERLSDVIAFTVDR 324


>gi|259907165|ref|YP_002647521.1| lysyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224962787|emb|CAX54242.1| Putative lysyl-tRNA synthetase (Lysine-tRNA ligase) [Erwinia
           pyrifoliae Ep1/96]
 gi|283476972|emb|CAY72856.1| putative lysyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163]
          Length = 325

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 107/350 (30%), Positives = 164/350 (46%), Gaps = 30/350 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F 
Sbjct: 1   MSDTASWQPSASI---ANLLKRAAIMAEIRRFFADRGVLEVETPAMSQATVTDVHLFPFQ 57

Query: 64  TELIIQDHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +         LYL TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGAAAGVDLYLMTSPEYHMKRLLAAGSGPIYQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   E A                  E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLECA----------------PAETLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A++ G       ++    +   + +  +EP +G      +  
Sbjct: 161 ------PLSADKAQLREAAEKLGAGDLAHREEDRDTLLQLLFVLGVEPEIGKEKPAFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA ++ALA I P D R  +RFE+Y   IEL N   EL D  EQR RFE++ +++     
Sbjct: 215 FPATQAALAEISPEDHRVAERFEVYFKGIELANGFHELTDSREQRQRFEQDNRKRAAAGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              PID   L  L   MP SSG+A+G DRLVML   A  +++VI     +
Sbjct: 275 PQQPIDNYLLEALAGGMPDSSGVALGVDRLVMLALKAERLSDVIAFTVDR 324


>gi|145590943|ref|YP_001152945.1| lysyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145282711|gb|ABP50293.1| lysyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 486

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 155/364 (42%), Gaps = 35/364 (9%)

Query: 2   HQIPSQPWWNRDF------HYRR---------RPFLLKRNMIQSSLREYFVENQFIEIDS 46
             +P   W   D        YR          R  +  R  +  + RE      F+EI +
Sbjct: 133 QPLPE--WGKVDRSSPFYMRYRSVAMVLDLQLRWRVAARARLIQAFREAMWRRGFLEIPT 190

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             LQ   G     R F+T++     I +  YL+ SPE   K+ + AG  K+F     +RN
Sbjct: 191 PVLQPIYGGAA-ARPFTTKIW---AIDEEWYLRISPELYLKRYIIAGFPKVFEIGPQFRN 246

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEP 165
            +   LH PEF  LE Y+A+  Y+ +M+    ++  A        +  ++  + N     
Sbjct: 247 EDIDALHNPEFWSLEAYQAYADYKDIMRLTEEVVYEAVRAVLGTGVVKYREWSINFSPPW 306

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
             +T+ +A   +A +D     D+  +     L +  +     VA          ++  + 
Sbjct: 307 RRVTLHDALREFAGVDPDRLTDDDIKERLRELQVPLRVYNRGVA--------LVKLFEKL 358

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  YP   + L   +       +RFE +   +E+ NA  EL DP++Q 
Sbjct: 359 VEKK--LVQPTFVLDYPEESTPLCKPHREKAGLVERFEAFVGGLEIANAYTELNDPVKQY 416

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F +E +   K  +E +P+D DF+  L+  MP + G+ +G DRL M++T A +I +VI 
Sbjct: 417 EFFAREEELFPK--DEAHPLDWDFVEELSFGMPPTGGVGIGVDRLAMIITNAESIKDVIP 474

Query: 345 TPFS 348
            P  
Sbjct: 475 YPIV 478


>gi|253991217|ref|YP_003042573.1| lysyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253782667|emb|CAQ85831.1| putative lysyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 342

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 102/345 (29%), Positives = 169/345 (48%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+++ ++  S   + H+  F TE +  
Sbjct: 24  WQPSAPI---ANLLKRATILAEIRRFFADRGVLEVETPAMSQSTVTDIHLFPFQTEFVGP 80

Query: 70  DHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LYL TSPE+  K+LLAAG   I+  +  +RN E G  H PEFTMLEWYR H  
Sbjct: 81  GASDGMTLYLMTSPEYHMKRLLAAGSGSIYQLSRCFRNEEAGRYHNPEFTMLEWYRPHYD 140

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +L+ +  ++++   +  +                 E ++  +AF RY +ID       
Sbjct: 141 MYRLINEVDDLLQQILDCESA----------------ELLSYQQAFLRYLDID------- 177

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   ++  L   A +  +    D  +    +   +    +EP++GI   T +  +PA ++
Sbjct: 178 PLSAEKEKLREVAAKLDLSNIADTEEDRDTLLQLLFTVGVEPHIGIEKPTFIYHFPASQA 237

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   +EL N   EL D  EQR RFE++  ++  +     P+D
Sbjct: 238 SLAEISKEDHRVAERFEVYFKGVELANGFRELTDGDEQRQRFERDNCKRTGLGLPVRPVD 297

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E+ +  L   MP+ +G+A+G DRLVML   A  +++VI    +++
Sbjct: 298 ENLIGALKQGMPECAGVALGVDRLVMLALAAEKLSDVIAFSVNKA 342


>gi|85058288|ref|YP_453990.1| lysyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123520181|sp|Q2NW90|SYK3_SODGM RecName: Full=Uncharacterized protein YjeA
 gi|84778808|dbj|BAE73585.1| lysyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 325

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 108/351 (30%), Positives = 168/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W           LLKR  I   +R +F +   +E+++ ++  +   + H+  F 
Sbjct: 1   MSDSASWQPSAPI---ANLLKRAAIVGQIRRFFSDRGLLEVETPAMSQATVTDIHLVPFQ 57

Query: 64  TELIIQDHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  I        PLYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TCFIGPGAAGGMPLYLMTSPEYHMKRLLAAGSGPLFQLCRSFRNEEAGRYHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   +  + +                 ++  + F R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQILDCDSAET----------------LSYQQVFTRHVGID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQ--AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  LY  A +   G   + +D    +   +    +EPN+G +    +  
Sbjct: 161 ------PLSADKAQLYDAAVKWDLGEAASVEDDRDTLLQLLFAMVVEPNIGHDKPAFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA ++ALA I   D R   RFE Y   IEL N   EL D  EQR RFE++ +++  +  
Sbjct: 215 FPASQAALAEISTEDHRVADRFEAYFKGIELANGFCELTDAREQRQRFEQDNRKRVAMKL 274

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PIDE+ LA L   MP+ SG+A+G DRLVML   A+ +++VI     ++
Sbjct: 275 SEQPIDENLLAALAQGMPECSGVALGVDRLVMLALKADRLSDVIAFAVERA 325


>gi|260914411|ref|ZP_05920880.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260631512|gb|EEX49694.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 323

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 104/338 (30%), Positives = 159/338 (47%), Gaps = 28/338 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LL R  I + +R +F +   +E+++  L      + H+  FST+ +  
Sbjct: 7   WRPSASI---NNLLTRAKIMAEIRRFFTDRGLLEVETPVLSEFGVTDVHLSTFSTQFVSP 63

Query: 70  -DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                K L+L TSPE+  K+LLAAG   IF   H +RN E G  H PEFTMLEWYR H  
Sbjct: 64  FGEQSKTLWLSTSPEYHMKRLLAAGSGPIFQLCHVFRNEESGHRHNPEFTMLEWYRPHFD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +L+ +  ++++                        E ++    F  Y  +D       
Sbjct: 124 MYRLINEVDDLLQ----------------QILECPPAESLSYQFVFQEYVGLD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P   D+  L  +A+Q  +  A ++    +   +    +EP +G+     +  +PA ++AL
Sbjct: 161 PLSADKSELAAKAKQYHLLSADEEDRDTLLQFLFSTVVEPKIGLENPVAVYHFPATQAAL 220

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I   D R  +RFE Y   +EL N   EL D  EQ HRFE++ + ++K+      ID+ 
Sbjct: 221 AQISSEDHRVAERFEFYYKGLELANGFHELTDANEQYHRFEQDNRLREKMGLPQRDIDKR 280

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            L  L   +P  SG+A+G DRL+M+  GA NI EVI  
Sbjct: 281 LLGALQAGVPNCSGVALGVDRLLMIALGAQNIQEVISF 318


>gi|304396301|ref|ZP_07378182.1| lysyl-tRNA synthetase-related protein GenX [Pantoea sp. aB]
 gi|304355810|gb|EFM20176.1| lysyl-tRNA synthetase-related protein GenX [Pantoea sp. aB]
          Length = 325

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 166/344 (48%), Gaps = 30/344 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+D+ ++  +   + H+  F T  +  
Sbjct: 7   WQPSASI---ANLLKRAAILAEVRRFFADRGVLEVDTPAMSQATITDIHLVPFQTRFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                + L+L TSPE+  K+LLAAG   I+  A ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAAQGRDLWLMTSPEYHMKRLLAAGSGPIYQMARSFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   E  + +                 ++  +AF R+  +D       
Sbjct: 124 MYRLMNEVDDLMQQVLECDSAES----------------LSYQQAFIRHLELD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A++ G       ++    +   + +  +EP +G +    +  +PA ++
Sbjct: 161 PLSADKAQLREAAEKLGEGELARAEEDRDTLLMLLFMLGVEPKIGQDKPCFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I   D R  +RFE+Y   IEL N   EL D  EQR RFE++ + +       +PID
Sbjct: 221 ALAEISTEDHRVAERFEVYYKGIELANGFRELTDSREQRQRFEQDNRRRAARGLPVHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              L  L   MP  SG+A+G DRL+ML   A ++++VI  P  +
Sbjct: 281 TYLLDALAHGMPACSGVALGVDRLIMLALKAESLSDVIAFPVDR 324


>gi|257471632|ref|ZP_05635631.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
           pisum)]
          Length = 350

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 27/332 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK-PLYLQT 80
           L+KR+ I S++R +F +   +E+++  L  S   + H+ +F T  I  D+I +  L+L T
Sbjct: 41  LIKRSNIISNIRLFFSKKNILEVETPILSRSTVTDVHLTSFETNYISSDNIDELKLWLTT 100

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLA+    I+   H++RN E G  H PEFTMLEWY+   S ++ +       
Sbjct: 101 SPEYHMKRLLASESGSIYQICHSFRNKELGRYHNPEFTMLEWYQPFCSMKKFI------- 153

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
                    K            ++ + ++  + F  +  ID       P   +   L+  
Sbjct: 154 ---------KEIDIFLQIILKCNKSDKVSYQDLFIDFLKID-------PLCANLLELHQI 197

Query: 201 AQQAGIRV--AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           +++  +      ++  + +   +   KIEPN+G      +  +PA +++LA I   DPR 
Sbjct: 198 SKKLKLDHLTHSENNLNKLIQLLFTLKIEPNIGKEKPLFVYHFPAEQASLAAINLKDPRI 257

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
           ++RFE++   IEL N   EL+D  EQ+ RF ++ +E++ +      ID  FL+ L   +P
Sbjct: 258 SERFEIFFKGIELGNGFYELIDVNEQKKRFIRDNKERRSMNLPIRKIDNFFLSALSYGLP 317

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             SG+A+G DRL+ML+    +I+EVI  P  +
Sbjct: 318 PCSGVAIGLDRLIMLILNKKSIHEVIAFPVDR 349


>gi|146310009|ref|YP_001175083.1| lysyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980063|sp|A4W5Q2|SYK3_ENT38 RecName: Full=Uncharacterized protein YjeA
 gi|145316885|gb|ABP59032.1| lysyl-tRNA synthetase-related protein GenX [Enterobacter sp. 638]
          Length = 325

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 102/351 (29%), Positives = 166/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMTEIRRFFADRGVLEVETPCMSQATVTDIHLVPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LY+ TSPE+  K+LLAAG   ++    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGMNLYMMTSPEYHMKRLLAAGCGPVYQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   + A                  E ++  + F R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDCAGA----------------ETLSYQQVFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G +  T +  
Sbjct: 161 ------PLSADKTQLREAAAKLDLSNVADTEEDRDTLLQLLFAFGVEPHIGKDRPTFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RF+++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFDQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID + L  L   +P SSG+A+G DRLVML  GA  + +VI     ++
Sbjct: 275 PQQPIDTNLLEALKAGLPDSSGVALGVDRLVMLALGAEQLADVIAFTVDRA 325


>gi|253690118|ref|YP_003019308.1| lysyl-tRNA synthetase-related protein GenX [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|259511524|sp|C6DFN3|SYK3_PECCP RecName: Full=Uncharacterized protein YjeA
 gi|251756696|gb|ACT14772.1| lysyl-tRNA synthetase-related protein GenX [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 325

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 99/345 (28%), Positives = 169/345 (48%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I +++R +F +   +E+++ ++  +   +  +  F T  +  
Sbjct: 7   WQPSASV---ANLLKRASIIAAIRRFFTDRGVLEVETPAMSQATVTDIFLYPFQTRFVGP 63

Query: 70  DHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  +YL TSPE+  K+LLAAG   IF    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGMTMYLMTSPEYHMKRLLAAGSGPIFQLCRSFRNEESGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +  + ++                ++  +AF R+  +D       
Sbjct: 124 MYRLMNEVDDLLQQVLDCESAEM----------------LSYQQAFLRHLELD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A++ G+      +D    +   +    +EP++G +    +  +PA ++
Sbjct: 161 PLSVDKAQLREAAEKLGLGDIACREDDRDSLVQMLFTFGVEPHIGRDKPAFVYHFPATQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQR RFE++ +++        PID
Sbjct: 221 SLAEISSEDHRVAERFEVYFKGIELANGFRELTDADEQRQRFEQDNRKRAARDLPQQPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E+ LA L   +P+ +G+A+G DRL+ML   A  +++VI     ++
Sbjct: 281 ENLLAALKHGLPECAGVALGVDRLIMLALNAEKLSDVIAFSVERA 325


>gi|219681923|ref|YP_002468309.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|219682478|ref|YP_002468862.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|254782461|sp|B8D8E5|SYK3_BUCA5 RecName: Full=Uncharacterized protein YjeA
 gi|254782462|sp|B8D8A2|SYK3_BUCAT RecName: Full=Uncharacterized protein YjeA
 gi|219622211|gb|ACL30367.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|219624766|gb|ACL30921.1| lysyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311086304|gb|ADP66386.1| lysyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon
           pisum)]
 gi|311087952|gb|ADP68031.1| lysyl-tRNA synthetase [Buchnera aphidicola str. JF98 (Acyrthosiphon
           pisum)]
          Length = 324

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 27/332 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK-PLYLQT 80
           L+KR+ I S++R +F +   +E+++  L  S   + H+ +F T  I  D+I +  L+L T
Sbjct: 15  LIKRSNIISNIRLFFSKKNILEVETPILSRSTVTDVHLTSFETNYISSDNIDELKLWLTT 74

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLA+    I+   H++RN E G  H PEFTMLEWY+   S ++ +       
Sbjct: 75  SPEYHMKRLLASESGSIYQICHSFRNKELGRYHNPEFTMLEWYQPFCSMKKFI------- 127

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
                    K            ++ + ++  + F  +  ID       P   +   L+  
Sbjct: 128 ---------KEIDIFLQIILKCNKSDKVSYQDLFIDFLKID-------PLCANLLELHQI 171

Query: 201 AQQAGIRV--AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           +++  +      ++  + +   +   KIEPN+G      +  +PA +++LA I   DPR 
Sbjct: 172 SKKLKLDHLTHSENNLNKLIQLLFTLKIEPNIGKEKPLFVYHFPAEQASLAAINLKDPRI 231

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
           ++RFE++   IEL N   EL+D  EQ+ RF ++ +E++ +      ID  FL+ L   +P
Sbjct: 232 SERFEIFFKGIELGNGFYELIDVNEQKKRFIRDNKERRSMNLPIRKIDNFFLSALSYGLP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             SG+A+G DRL+ML+    +I+EVI  P  +
Sbjct: 292 PCSGVAIGLDRLIMLILNKKSIHEVIAFPVDR 323


>gi|270264987|ref|ZP_06193250.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270040921|gb|EFA14022.1| lysyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 325

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 101/345 (29%), Positives = 170/345 (49%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRAAILTEIRRFFADRGVLEVETPTMSQATVTDIHLFPFQTRFVGP 63

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGLTLYMMTSPEYHMKRLLAAGSGPIYQMGRSFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +  + +                 ++  +AF R+ +ID       
Sbjct: 124 MYRLMNEVDDLLQQVLDCDSAET----------------LSYQQAFLRHLDID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   ++  L   A +  +    D  +    +   +    +EP +G +    +  +PA ++
Sbjct: 161 PLSAEKAQLREAAAKLDLSNIADTEEDRDTLLQLLFTVGVEPYIGRDKPAFVYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQR RF+++ +++ +     +PID
Sbjct: 221 SLAEISTEDHRVAERFEVYFKGIELANGFRELTDSREQRQRFDQDNRKRAERGLPQHPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            + L  L   MP+SSG+A+G DRLVML  GA +++EV+  P  ++
Sbjct: 281 NNLLDALQHGMPESSGVALGVDRLVMLALGAESLSEVLAFPVGRA 325


>gi|294634441|ref|ZP_06712977.1| lysyl-tRNA synthetase GenX [Edwardsiella tarda ATCC 23685]
 gi|291092151|gb|EFE24712.1| lysyl-tRNA synthetase GenX [Edwardsiella tarda ATCC 23685]
          Length = 325

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 168/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W           LLKR  I +++R +F +   +E+D+ S+  +   + H+  F 
Sbjct: 1   MSDTASWQPSA---PVANLLKRASIMATIRRFFSDRGVLEVDTPSMSQATITDVHLVPFQ 57

Query: 64  TELIIQD-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +         LYL TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEW
Sbjct: 58  THFVGPGVAQGMTLYLMTSPEYHMKRLLAAGSGPIYQLCRSFRNEESGRYHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   E  + +                 ++  +AF R+ ++D 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLECESAET----------------LSYQQAFIRHLDVD- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRV--AHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +      ++    +   +    +EP++G      +  
Sbjct: 161 ------PLSADKTQLREAAAKLDLSNVADKEEDRDTLLQLLFAFGVEPHIGKERPAFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   +EL N   EL D  EQR RFE++ +++  +  
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYRGVELANGFHELTDADEQRLRFEQDNRKRAALGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              P+DE  LA L   MP SSG+A+G DRL+ML   A  ++EVI     ++
Sbjct: 275 PQQPLDEHLLAALAHGMPDSSGVALGVDRLIMLALSAERLSEVIAFSVDRA 325


>gi|37527966|ref|NP_931311.1| lysyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|39932262|sp|Q7MZY6|SYK3_PHOLL RecName: Full=Uncharacterized protein YjeA
 gi|36787402|emb|CAE16493.1| Putative lysyl-tRNA synthetase (Lysine--tRNA ligase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 325

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 99/345 (28%), Positives = 167/345 (48%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+++ ++      +  + +F TE +  
Sbjct: 7   WQPSAAI---ANLLKRATILAEIRRFFADRGVLEVETPAMGQFTVTDIQLFSFQTEFVGP 63

Query: 70  DHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LYL TSPE+  K+LLAAG   I+     +RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGMTLYLMTSPEYHMKRLLAAGSGPIYQLGRCFRNEEAGRYHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +  + +                 ++  +AF RY +ID       
Sbjct: 124 MYRLMNEVDDLLQQILDCESAES----------------LSYQQAFLRYLDID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   ++  L   A +  +    D  +    +   +    +EP++G    T +  +PA ++
Sbjct: 161 PLSAEKEKLREIAAKLDLSNIADIEEDRDTLLQLLFAVGVEPHIGTEKPTFIYHFPASQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   +EL N   EL D  EQ  RFE++ +++  +     PID
Sbjct: 221 SLAEISKEDHRVAERFEVYFKGVELANGFRELTDSHEQCQRFERDNRKRAALGLPVRPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E+ +  L   MP+ +G+A+G DRLVML  GA  +++V+    +++
Sbjct: 281 ENLIGALKQGMPECAGVALGVDRLVMLALGAEKLSDVMAFSITKA 325


>gi|315125469|ref|YP_004067472.1| fold recognizing lysyl-tRNA [Pseudoalteromonas sp. SM9913]
 gi|315013982|gb|ADT67320.1| fold recognizing lysyl-tRNA [Pseudoalteromonas sp. SM9913]
          Length = 324

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 111/345 (32%), Positives = 164/345 (47%), Gaps = 28/345 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W           L +R  I  S+RE+F E   +E+++ SL  +   + H+ +F+T  + 
Sbjct: 5   LWKPSASI---EILKQRAAIMRSIREFFYERNVMEVETPSLSAASVTDVHLASFNTTFVG 61

Query: 69  QD-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                  PL+LQTSPEF+ K+LLAAG   IF    A+RN E G  H PEFTMLEWYR   
Sbjct: 62  PGHAGGLPLFLQTSPEFAMKRLLAAGSGAIFQLCKAFRNEEAGSHHNPEFTMLEWYRPGF 121

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
               LM +   +++   EVA                  E +T  +AF R   +D  T   
Sbjct: 122 DEFALMDEIDELMQLILEVA----------------PAERVTYQQAFERALGVDPLTVSI 165

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSD-IFSRILIEKIEPNLGINCCTILDRYPAPES 246
                   L  L  +     +A ++T  D +   +   K+EP +G +    +  +PA ++
Sbjct: 166 T------QLQQLACEHGFADIAKNETHKDTLLQLLFCMKVEPTIGQDKPCFVYHFPASQA 219

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I   D R   RFELY  N+EL N  +EL +  EQ  RF ++   +     +  P+D
Sbjct: 220 ALAQICEHDERVAGRFELYYKNMELANGFNELTNAKEQAKRFNEDNTYRAANGLKQVPMD 279

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              +A L   + Q +G+A+G DRLVML T    I EVI    +++
Sbjct: 280 TRLIAALEHGLEQCAGVALGIDRLVMLATNKQKIKEVIAFDVTRA 324


>gi|304413224|ref|ZP_07394697.1| putative lysyl-tRNA synthetase [Candidatus Regiella insecticola
           LSR1]
 gi|304284067|gb|EFL92460.1| putative lysyl-tRNA synthetase [Candidatus Regiella insecticola
           LSR1]
          Length = 330

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 112/339 (33%), Positives = 166/339 (48%), Gaps = 25/339 (7%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L KR  I + +R++F EN  +E+++ +L  +   + H+  F T+ I  
Sbjct: 9   WRPSASI---DHLKKRARILAKIRQFFAENNVMEVETPALSQATVTDIHLFPFQTQFIGP 65

Query: 70  DHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LY+ TSPE+  K+LLAAG   I+    ++RN E GC H PEFTMLEWYR    
Sbjct: 66  GAAAGLTLYMMTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAGCHHNPEFTMLEWYRPGYD 125

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            ++L+ +   +++                        E ++  +AF RY  ID  T  + 
Sbjct: 126 MQKLIDEVDKLLQLILCC----------------KPAEQLSYQQAFIRYLEIDPLTANN- 168

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSD-IFSRILIEKIEPNLGINCCTILDRYPAPESA 247
             Q  R +    A      +A ++   D +   + +  IEP +G +    +  YPA +SA
Sbjct: 169 --QALRAVARRPALSHIADIADNEESRDTLLQLLFVSGIEPRIGHDKPVFVYHYPASQSA 226

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA I P DPR  +RFE+Y   IEL N  DEL D  EQR RFE E  ++  +      IDE
Sbjct: 227 LARINPDDPRVAERFEVYYKGIELANGFDELTDSAEQRQRFENENNQRVNLGLAPASIDE 286

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           + +A L   +P  SG+A+G DRL+ML   A  I+EV+  
Sbjct: 287 NLIAALQHGLPACSGVALGVDRLIMLALNAKKISEVMAF 325


>gi|50122888|ref|YP_052055.1| lysyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81643796|sp|Q6D033|SYK3_ERWCT RecName: Full=Uncharacterized protein YjeA
 gi|49613414|emb|CAG76865.1| putative lysyl-tRNA synthetase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 325

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 169/345 (48%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I +++R +F +   +E+++ ++  +   +  +  F T  +  
Sbjct: 7   WQPSASV---ANLLKRASIVAAVRRFFTDRGVLEVETPAMSQATVTDVFLYPFQTRFVGP 63

Query: 70  DHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LYL TSPE+  K+LLAAG   IF    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGMTLYLMTSPEYHMKRLLAAGSGPIFQLCRSFRNEESGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +  + ++                ++  +AF R+  ID       
Sbjct: 124 MYRLMNEVDDLLQQVLDCESAEM----------------LSYQQAFLRHLEID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A++ G+      +D    +   +    +EPN+G +    +  +PA ++
Sbjct: 161 PLSVDKAQLREAAEKLGLGDIACREDDRDSLVQMLFTFGVEPNIGRDKPAFVYHFPATQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   IEL N   EL D  EQR RFE++ +++        PID
Sbjct: 221 SLAEISSEDHRVAERFEVYFKGIELANGFRELTDADEQRQRFEQDNRKRAARGLSQQPID 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E+ LA L   +P+ SG+A+G DRL+ML   A  +++VI     ++
Sbjct: 281 ENLLAALKNGLPECSGVALGVDRLIMLALKAEKLSDVIAFSVERA 325


>gi|183598051|ref|ZP_02959544.1| hypothetical protein PROSTU_01407 [Providencia stuartii ATCC 25827]
 gi|188022830|gb|EDU60870.1| hypothetical protein PROSTU_01407 [Providencia stuartii ATCC 25827]
          Length = 325

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 100/343 (29%), Positives = 169/343 (49%), Gaps = 30/343 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LL+R  I + +R +F E   +E+++ ++  +   + H+  F+T  +  
Sbjct: 7   WQPSAPI---ANLLQRAKIIAEIRRFFTERCVLEVETPAMSQATITDIHLVPFNTRFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LYL TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAAQGIDLYLMTSPEYHMKRLLAAGSGPIYQLCRSFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +L+ +  ++++   +  +                 E ++  +AF R+ +ID       
Sbjct: 124 MYRLINEVDDLLQQVLDCESA----------------ELLSYQQAFLRHLDID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRV--AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   ++  L   A +  +     H++    +   +    +EP++G     ++  +PA ++
Sbjct: 161 PLSAEKSELKEVAARLDLSNVAEHEEDKDTLLQLLFTMGVEPHIGKEKPVVVYHFPATQA 220

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R  +RFE+Y   +EL N   EL D  EQR RFE++ + +  +    +PID
Sbjct: 221 SLAEISTEDHRVAERFEVYFKGMELANGFRELTDAKEQRQRFEQDNRRRAALGLPVHPID 280

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E  LA L   +P+ SG+A+G DRL+M+   A  I++VI  P +
Sbjct: 281 EHLLAALTHGLPECSGVALGVDRLIMIALKAEKISDVIAFPVT 323


>gi|113461419|ref|YP_719488.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|170718955|ref|YP_001784121.1| lysyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|123132224|sp|Q0I4V7|SYK3_HAES1 RecName: Full=Uncharacterized protein YjeA
 gi|189082340|sp|B0USM2|SYK3_HAES2 RecName: Full=Uncharacterized protein YjeA
 gi|112823462|gb|ABI25551.1| lysyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|168827084|gb|ACA32455.1| lysyl-tRNA synthetase-related protein GenX [Haemophilus somnus
           2336]
          Length = 323

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 104/338 (30%), Positives = 159/338 (47%), Gaps = 28/338 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LL R  I + +R +F E   +E+++  L      + H+  FST     
Sbjct: 7   WQPSASI---QNLLARAKIIADIRRFFTERGLLEVETPVLSEFGVTDVHLSTFSTAFTSP 63

Query: 70  D-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                K L+L TSPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H  
Sbjct: 64  FMEKSKTLWLTTSPEYHMKRLLAAGSGAIFQLCKVFRNEESGKKHNPEFTMLEWYRPHFD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +L+ +  ++++   +                    E  +    F  +  ID       
Sbjct: 124 MHRLINEVDDLLQQTLDC----------------EPAEMASYQFVFQEHVGID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P     + L  +A++  +  A ++    +   +    +EPN+G N    +  +PA ++AL
Sbjct: 161 PLSAPINELIEKARECHLDGAENEDRDTLLQFLFSTLVEPNIGQNKPIAVYHFPATQAAL 220

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I   D R  +RFE Y   IEL N  +EL D  EQ HRF ++ + ++++    + ID  
Sbjct: 221 AQISSEDHRVAERFEFYYKGIELANGFNELTDAQEQEHRFNQDNRLREQLGLPQHEIDHR 280

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FL  L   +P ++G+A+G DRL+ML  GA NI+EVI  
Sbjct: 281 FLGALQAGLPNTAGVALGVDRLIMLALGAENISEVISF 318


>gi|311281287|ref|YP_003943518.1| lysyl-tRNA synthetase-related protein GenX [Enterobacter cloacae
           SCF1]
 gi|308750482|gb|ADO50234.1| lysyl-tRNA synthetase-related protein GenX [Enterobacter cloacae
           SCF1]
          Length = 325

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 30/351 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGMNLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +L+ +  ++++   E                    E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLINEVDDLLQQVLEC----------------QPAESLSYQQAFQRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRV--AHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +      ++    +   +    +EP++G +  T +  
Sbjct: 161 ------PLSADKPQLREAAAKLDLSNVAETEEDRDTLLQLLFAFGVEPHIGKDRPTFVYH 214

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++     
Sbjct: 215 FPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGL 274

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              PID + L  L   +P  SG+A+G DRLVML  GA  + +VI     ++
Sbjct: 275 VQQPIDVNLLGALQAGLPDCSGVALGVDRLVMLALGAEQLADVIAFTVDRA 325


>gi|308048215|ref|YP_003911781.1| lysyl-tRNA synthetase-related protein GenX [Ferrimonas balearica
           DSM 9799]
 gi|307630405|gb|ADN74707.1| lysyl-tRNA synthetase-related protein GenX [Ferrimonas balearica
           DSM 9799]
          Length = 323

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 153/342 (44%), Gaps = 30/342 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L +R  +   +R++F E    E+++  L  +   + H+  F T  +  
Sbjct: 5   WQPTATM---AVLKQRAQLMGRIRDFFAERGVWEVETPCLSQAAVTDVHLHNFDTRFVGP 61

Query: 70  DHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                 PLYL TSPE+  K+LL AG   IF    ++RN E G  H PEFTMLEWYR    
Sbjct: 62  GAAEGIPLYLMTSPEYHMKRLLCAGSGSIFQLCRSFRNEEAGRFHNPEFTMLEWYRVGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM +  ++++                       P+ +T A+AF +   +       N
Sbjct: 122 HHALMDEMADLLQAVLGCG----------------APQRMTYAQAFEQALGV-------N 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L    +Q G+      +     +   +   ++E  +G     ++  +PA ++
Sbjct: 159 PLEASLAQLKALCEQHGMGDLAEAEQDADTLLQLLFATQVESRIGQTVPAMVYHFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I   DPR  +RFE+Y   +EL N   EL D  EQR RF  +  ++        PID
Sbjct: 219 ALARIDEQDPRVARRFEVYFKGVELANGFHELADADEQRARFVADNAQRAAHGLPQRPID 278

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E  +A L   +P  +G+A+G DRLVML   A  I +VI  P 
Sbjct: 279 EHLIAALAAGLPDCAGVALGIDRLVMLALDAKAIKDVIPFPV 320


>gi|148976860|ref|ZP_01813515.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145963734|gb|EDK28994.1| lysyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 323

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 101/345 (29%), Positives = 162/345 (46%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W      ++   L +R  I S +R++F E   +E+D+ ++ ++   + H+  F TE +  
Sbjct: 5   WQPAATIKQ---LKQRADILSQVRQFFAERDVMEVDTPAMSHATVTDVHLHTFKTEFVGP 61

Query: 70  D-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                +PL+  TSPEF  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR    
Sbjct: 62  GYAQGQPLFFMTSPEFHMKRLLAAGSGCIYQICKSFRNEENGRYHNPEFTMLEWYRVGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM +   +++                      E E +T  +AF     +        
Sbjct: 122 HHNLMDEMDLLLQ----------------QILKSGEAERMTYQQAFIDVLGV-------C 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +   + L   A + G+      ++    +   +    +E  +G      +  +PA ++
Sbjct: 159 PLEDSMNTLKQAAAKLGLSDIADPEEDRDTLLQLLFSVGVEEKIGQTVPAFVYDFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P DPR   RFE+Y   IEL N   EL  P EQ  RFE +  ++ ++     PID
Sbjct: 219 ALAKINPNDPRVADRFEVYFKGIELANGFHELDKPQEQLKRFEDDNAKRNEMGLSPQPID 278

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              +  L   +P  +G+A+G DRL+ML  G ++I++V   PF +S
Sbjct: 279 HHLIEALKAGLPDCAGVALGIDRLIMLALGYDHIDDVTAFPFPRS 323


>gi|83592414|ref|YP_426166.1| tRNA synthetase, class II (D, K and N) [Rhodospirillum rubrum ATCC
           11170]
 gi|83575328|gb|ABC21879.1| tRNA synthetase, class II (D, K and N) [Rhodospirillum rubrum ATCC
           11170]
          Length = 358

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 157/354 (44%), Positives = 212/354 (59%), Gaps = 9/354 (2%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           S PW++ D H RRRPFLL R    +++R +  E+  IE+D+ +LQ SPG E H+RAF+T 
Sbjct: 5   SPPWFHPDSHARRRPFLLARARAAAAIRAFLGESGCIEVDTPALQISPGLEPHLRAFATT 64

Query: 66  LIIQDHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
           L       +  L L TSPEF+ KK+LAAGE  IF  AH +RNGE+G  H PEFTMLEWYR
Sbjct: 65  LEKPFDQGRATLRLHTSPEFAMKKILAAGETAIFQLAHVFRNGERGPTHHPEFTMLEWYR 124

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +  SYE LM +  +++R  A     +   + +   +PF   E ++VA+A  RYA IDL  
Sbjct: 125 SAMSYEALMAETEDLVRAVARATGAERLVWGDAAADPFGPWERLSVAQALERYAGIDLLG 184

Query: 185 TLD-------NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
            LD       N  +PD   L   A+  GI  + +D + D+F RI+++++E  LG     I
Sbjct: 185 ALDAGVAISGNALEPDAGALAEAARAIGIACSPNDRFEDVFFRIVLDRVEHRLGHERPCI 244

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           L  YPA  +AL+     DPR  +RFE+Y   +EL NA  EL D  EQR RF  +M  K+ 
Sbjct: 245 LYDYPACMAALSRRKDDDPRLAERFEVYVGGLELANAFGELTDAAEQRARFTHDMDVKEA 304

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +Y E YPID DFL  L   +   SGIA+GFDRLVML TGA+ I++V+W P +  
Sbjct: 305 LYGERYPIDGDFLEALDQGLAPCSGIALGFDRLVMLCTGADAIDDVLWAPVADP 358


>gi|238897703|ref|YP_002923382.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511523|sp|C4K3U1|SYK3_HAMD5 RecName: Full=Uncharacterized protein YjeA
 gi|229465460|gb|ACQ67234.1| putative lysyl-tRNA synthetase with Class II aaRS and biotin
           synthetase domains [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 325

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 100/333 (30%), Positives = 163/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD-HIRKPLYLQT 80
           LLKR  +   +R++F +   +E+D+  +  +   + H+  F T  +         LY+ T
Sbjct: 16  LLKRADMIKKIRQFFTDRGVLEVDTPCMSQATVTDVHLSTFETRFLAPTMAKSLSLYMTT 75

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   I+     +RN E G  H PEFT+LEWYR H    +LM +  +++
Sbjct: 76  SPEYHMKRLLAAGSGPIYQMGRCFRNEEMGRYHNPEFTLLEWYRPHYDMYRLMDEVDDLL 135

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      + +                 ++  +AF R+ NID       P   D   +   
Sbjct: 136 QQILTCHSAET----------------LSYQQAFLRHLNID-------PLSADETQIKEA 172

Query: 201 AQQAGIRVAHDDTWSDI--FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A +  +    D+          + +  +EP +G +    +  +PA ++ALA+I   D R 
Sbjct: 173 AVRLNLASITDNEKDRDTFLQLLFMAGVEPYIGRDKPVFIYHFPASQAALASISTEDYRV 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   IEL N   EL D  EQ+ RFE++ +++  +      IDE F+A L   +P
Sbjct: 233 AERFEVYFKGIELANGFYELTDSAEQQQRFEQDNRQRAALGLPKRSIDERFIAALKHGLP 292

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             SG+A+G DRLVML   A N++EV+  P  ++
Sbjct: 293 PCSGVALGIDRLVMLSVNAENLSEVMAFPVERA 325


>gi|322513263|ref|ZP_08066387.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322120970|gb|EFX92817.1| lysine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 331

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 100/326 (30%), Positives = 160/326 (49%), Gaps = 25/326 (7%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYLQT 80
           L+KR+ I + +R++F +   +E+++ +L      + H+  FST+ +     + K L+L T
Sbjct: 24  LIKRSQIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFASKAKTLHLMT 83

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H    +L+ +  +++
Sbjct: 84  SPEYHMKRLLAAGSGSIFQLCRVFRNEEVGKRHNPEFTMLEWYRPHFDMYRLINEVDDLL 143

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +                        E  +    F  Y  +D       P    R  L  +
Sbjct: 144 Q----------------QILDCEPAESYSYQFVFQTYVGLD-------PLSATRAQLVEK 180

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A++ G     D+    +   +  E +E N+G    T +  +P+ ++ALA I   D R  +
Sbjct: 181 ARKHGFPCEDDENRDTLLQFLFSEIVEANIGKERPTAVYHFPSSQAALAQISSEDHRVAE 240

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
           RFE+Y   +EL N  DEL D  EQ  RFE++  ++ ++      +D  FLA L   +P  
Sbjct: 241 RFEVYYKGLELANGFDELSDAKEQMRRFEQDNVQRAQMGLPAQQLDTRFLAALKAGIPNC 300

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWT 345
           SG+A+G DRL+M+   A  I+EV+  
Sbjct: 301 SGVALGVDRLMMIAMNAEKIDEVMAF 326


>gi|325973201|ref|YP_004250265.1| lysyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|325989644|ref|YP_004249343.1| Lysyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574729|emb|CBZ40385.1| Lysyl-tRNA synthetase [Mycoplasma suis]
 gi|323651803|gb|ADX97885.1| lysyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 481

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 86/365 (23%), Positives = 155/365 (42%), Gaps = 32/365 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRR--PFLLK---------RNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     N +   R R    L+          R+ I   LR Y     ++E ++ 
Sbjct: 132 LKPLPEKRVGITNPELMMRNRVGALLVNNDLLEDLGWRSKIIFELRNYLNSLGYLEFETP 191

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G     + F T     + +++ L+L+ + E   K+L+ +G  K+F    ++RN 
Sbjct: 192 ILHKIAGGAV-AKPFKT---FHNSLKEELFLRIATELHLKRLIVSGFTKVFEIGKSFRNE 247

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E Y  +   E  M    NII    ++ +++    +          E 
Sbjct: 248 GIDSTHNPEFTSIEIYTTYLDMELTMDLTENIILHLNKLISERTAGEERQRGISSLTFER 307

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEKI 226
             + E      N+D          P    +   A +  I +  H+  WS I+ ++  + I
Sbjct: 308 KAIWELLQEKLNVDFLNNP-----PSLEEMLKLASKWNIHLEEHEKNWSSIYEKLFEDLI 362

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
            P   +   T +  + +  S LA    ++ RF +RFELY   +EL N   E  DP EQ +
Sbjct: 363 SPE--LKNPTFVYGFSSELSPLAKKDFSNERFARRFELYMDGVELANGFSEQNDPEEQLN 420

Query: 287 RFEKEM-QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +F+ +  +E  +       +D D+++CL   +P + G+ +G DRL+M +    +I E+I 
Sbjct: 421 QFKLQASRETSQGG-----VDYDYISCLEYGLPPTGGVGIGLDRLIMFLLNRQSIKEIIA 475

Query: 345 TPFSQ 349
            P  +
Sbjct: 476 FPHLK 480


>gi|89067234|ref|ZP_01154747.1| putative lysyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89046803|gb|EAR52857.1| putative lysyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 342

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 171/343 (49%), Positives = 217/343 (63%), Gaps = 4/343 (1%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
             WW++  H  RRP LL RN IQ++LR +F +  F EID   +  SPGNE H+ A    L
Sbjct: 2   SSWWDKRRHTDRRPLLLTRNRIQAALRAWFADRGFTEIDPAYVVPSPGNEIHLHALPVTL 61

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ--GCLHQPEFTMLEWYR 124
              D   +  +L TSPEF+ KKLLAAGEEKIF F+  WR+ E   G LH+ EFTMLEWYR
Sbjct: 62  TDADLETRQAWLHTSPEFAMKKLLAAGEEKIFTFSRVWRDREAAAGALHRHEFTMLEWYR 121

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A   YEQLM DC  ++  A E A   + S +   C P    E ++VA+AF R   IDL  
Sbjct: 122 ADAPYEQLMDDCEELLAIACEAAGTDVLSHRGETCMPSRGLERLSVADAFLRQ-GIDLLA 180

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
           T+ +  Q D  LL  Q +        + +WSD+FS IL + + P LG    TILDRYPAP
Sbjct: 181 TIRDG-QGDLELLLRQGETLRGASRFETSWSDLFSMILTDLVAPGLGRGRATILDRYPAP 239

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           E+ALA   P DPR  +RFEL+AC +EL N   EL DP+EQR RF+ +M  ++++Y E YP
Sbjct: 240 EAALARRAPDDPRVAERFELFACGVELANGFGELTDPVEQRARFKADMATRERLYGERYP 299

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           IDEDFLA L +MP +SGIA+GFDRLVML TGA  +++VIWTP 
Sbjct: 300 IDEDFLAALADMPPASGIALGFDRLVMLATGAPRLSDVIWTPV 342


>gi|145632195|ref|ZP_01787930.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144987102|gb|EDJ93632.1| lysyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 323

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 109/339 (32%), Positives = 164/339 (48%), Gaps = 28/339 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W      +    LLKR  I + +R++F E   +E+++  L      + H+  FSTE + 
Sbjct: 6   HWQPSADIKN---LLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLA 62

Query: 69  Q-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
             D+  K L+L TSPE+  K+LLAAG   IF  +  +RN E G  H PEFTMLEWYR H 
Sbjct: 63  PFDNQSKTLWLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNPEFTMLEWYRPHF 122

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
              +L+ +  ++++                        E ++    F  Y  +D      
Sbjct: 123 HMHRLINEVDDLLQ----------------QILDCPPAESLSYQFVFQEYVGLD------ 160

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
            P   +R  L   A++       ++    +   +  E +EP +G      +  +P+ ++A
Sbjct: 161 -PLSAERSELIEAARKHNFMAEDNEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPSTQAA 219

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA + P D R  +RFE Y   +EL N   EL D  EQRHRFE + Q+++K    T  IDE
Sbjct: 220 LAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTQEIDE 279

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FLA L   MP +SG+A+G DRL+M+      IN+VI  
Sbjct: 280 RFLAALEEGMPDTSGVALGIDRLMMIALDCEKINDVISF 318


>gi|254508180|ref|ZP_05120305.1| lysyl-tRNA synthetase family protein [Vibrio parahaemolyticus 16]
 gi|219548902|gb|EED25902.1| lysyl-tRNA synthetase family protein [Vibrio parahaemolyticus 16]
          Length = 323

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 166/333 (49%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK-PLYLQT 80
           L +R  + + +R++F+E   +E+D+ ++ ++   + H+  F TE +   +     LY  T
Sbjct: 14  LRQRAHLLNQIRQFFLERDVLEVDTPAMSHATVTDVHLHTFQTEFVGPGYADGSKLYFMT 73

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    + QLM +  +++
Sbjct: 74  SPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNPEFTMLEWYRVGFDHHQLMDEMDDLL 133

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   +                    E +T  +AF     +        P +     L + 
Sbjct: 134 QLVLKCGAA----------------ERMTYQQAFMDVLGV-------CPLEGSMQELKVV 170

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A + G+      +D    +   +    +E  +G      +  +PA ++ALA I   DPR 
Sbjct: 171 AAKLGLSDIAEPEDDRDTLLQLLFSIGVEAKIGQKTPAFVYDFPASQAALAKINRQDPRV 230

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFELY   IEL N   EL +P EQ  RFE++  ++ ++  E  PID + +A L   +P
Sbjct: 231 ADRFELYFKGIELANGFHELDNPKEQLKRFEQDNAKRVEMGLEPQPIDHNLIAALESGLP 290

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 291 ECAGVALGVDRLIMLAIGCDHIDQVTAFPFPRA 323


>gi|212540142|ref|XP_002150226.1| lysyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224]
 gi|210067525|gb|EEA21617.1| lysyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224]
          Length = 521

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 87/340 (25%), Positives = 141/340 (41%), Gaps = 15/340 (4%)

Query: 17  RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL 76
           R    +  R+ I   +R++FVE  F+E+++  +    G  T  R F T         K L
Sbjct: 190 RTSDIMRIRSAIIQYIRQFFVERAFMEVNTPIMASEAGGAT-ARPFVTTANEF--PDKSL 246

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           YL+ +PE   K+L+  G +K+F    ++RN      H PEFT  E+Y A+ + E +M   
Sbjct: 247 YLRIAPELWLKRLVIGGFDKVFEIGASFRNEGIDKSHNPEFTTCEFYMAYANLEDVMSMT 306

Query: 137 MNIIRCAAEVANQKIFSFQ----NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            ++    AE   Q            N N  +    I       +  N  L        + 
Sbjct: 307 ESLFSGLAEHVTQHKERMNSEIPTPNTNFSAPFRRIDFIPGIEQAINRPLPDLSSPTAEE 366

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           D   L+       I +    T   +  ++    +EP       T +   P   S L+  +
Sbjct: 367 DVKQLFA---DLSIPLPDLPTLPRLMDKLCSTYLEPQC--IEPTFITHPPECLSPLSKSF 421

Query: 253 -PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              + R   R EL+    E  NA +E   P EQR +FE++ +   +  NE+  +DE +L 
Sbjct: 422 LQNNQRVAARCELFIEGREYVNAYEEENSPWEQRQKFEQQ-KIFNQHTNESTGVDESYLQ 480

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +   +P + G   G DRLVML T +  I +V+     +S
Sbjct: 481 AMEWGLPPTGGWGCGIDRLVMLFTDSKRIGDVLPFKTLRS 520


>gi|167856675|ref|ZP_02479363.1| putative lysyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167852197|gb|EDS23523.1| putative lysyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 323

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 166/347 (47%), Gaps = 28/347 (8%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
            QP W           LLKR  I + +R++F E   +E+++ ++      + H+  FST+
Sbjct: 3   EQPDWKPSASI---QHLLKRAKIMAEIRQFFTERGVLEVETPAMSEFSVTDVHLSTFSTQ 59

Query: 66  LIIQ-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
            +       K L+L TSPE+  K+LLA G   IF     +RN E    H PEFTMLEWYR
Sbjct: 60  FLSPFSSQAKTLHLITSPEYHMKRLLACGSGAIFQLCRVFRNEEVSKCHNPEFTMLEWYR 119

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
            H    +L+ +  ++++   +    + FS+Q V                F  Y  +D   
Sbjct: 120 PHFDMYRLINEVDDLLQQILDCEPAESFSYQFV----------------FQTYVGLD--- 160

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
               P    +  L  +A++ G++   D+    +   +  E +E N+G    T +  +PA 
Sbjct: 161 ----PLSATKAQLVAKAREHGLQCDEDEQRDTLLQFLFSEVVEANIGKERPTAVYHFPAT 216

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           ++ALA I   D R  +RFE Y   +EL N   EL D  EQ  RFE++   ++ +      
Sbjct: 217 QAALAQISTEDHRVAERFEFYYKGLELANGFHELSDAKEQIRRFEQDNVLREAMGLPPQQ 276

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +D  FL  L   MP  SG+A+G DRL+M+   A++I++V+     ++
Sbjct: 277 LDRRFLEALKAGMPNCSGVALGVDRLMMIAMNADSIDQVMAFGVERA 323


>gi|153213968|ref|ZP_01949161.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 1587]
 gi|124115538|gb|EAY34358.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 1587]
          Length = 349

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 102/333 (30%), Positives = 163/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   + +   LYL T
Sbjct: 40  LKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSALYLMT 99

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 100 SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 159

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P + +   L   
Sbjct: 160 QLVLRCGSA----------------ERMTYQEAFLNVLGV-------CPIEGEMRELKQV 196

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I PADPR 
Sbjct: 197 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPADPRV 256

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 257 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLP 316

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 317 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 349


>gi|251793016|ref|YP_003007742.1| lysyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534409|gb|ACS97655.1| putative lysyl-tRNA synthetase-like protein GenX [Aggregatibacter
           aphrophilus NJ8700]
          Length = 323

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 100/326 (30%), Positives = 157/326 (48%), Gaps = 25/326 (7%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQT 80
           LL R  + + +R +F +   +E+++  L      + H+  FSTE I       K L+L T
Sbjct: 16  LLTRAKLLAEIRRFFTDRGLLEVETPVLSEFGVTDVHLATFSTEFISPFGEQSKTLWLST 75

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H    +L+ +  +++
Sbjct: 76  SPEYHMKRLLAAGSGPIFQIGKVFRNEEAGNRHNPEFTMLEWYRPHFDMYRLINEVDDLL 135

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +                        E ++   AF +Y  +D       P   D   L  +
Sbjct: 136 Q----------------QILECPPAESMSYQFAFQQYVGLD-------PLSADLSELVEK 172

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A++  +  A +++   +   +    +EP +G     ++  +PA ++ALA I   D R  +
Sbjct: 173 AEKHQLIGAENESRDTLLQFLFSTVVEPQIGQEAPVVVYHFPASQAALAQISSEDLRVAE 232

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
           RFE Y   +EL N   EL D  EQ  RF+++  +++K+      ID   LA L   +P  
Sbjct: 233 RFEFYYKGLELANGFHELSDAREQLRRFQQDNLQREKMGLPVRAIDTRLLAALQAGIPNC 292

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWT 345
           SG+A+G DRL+M+  G  +I EVI  
Sbjct: 293 SGVALGVDRLLMIAMGTESIREVISF 318


>gi|299133808|ref|ZP_07027002.1| Lysine--tRNA ligase [Afipia sp. 1NLS2]
 gi|298591644|gb|EFI51845.1| Lysine--tRNA ligase [Afipia sp. 1NLS2]
          Length = 345

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 168/346 (48%), Positives = 224/346 (64%), Gaps = 5/346 (1%)

Query: 3   QIPSQ--PWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
            +P +  PWW+RD H  RRPFL +R  I  ++R++F    F+E+++  LQ SPGNETH+ 
Sbjct: 2   PVPPKTSPWWDRDRHRDRRPFLCQRATITRAVRDWFGAQDFLEVETGILQVSPGNETHLH 61

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           A   +L  ++  +   YL+TSPEF+CKKLLAAGE+KI  FA  +R  E   LH  EFTML
Sbjct: 62  ALQADLPGEEG-QIAGYLRTSPEFACKKLLAAGEDKIVEFAKVFRGREDSPLHLTEFTML 120

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           EWYRA+  YE +M DC+ +I  AAE A    FSF+    +P   P+ +TVAEAF R+A I
Sbjct: 121 EWYRANAPYETIMADCVAVIARAAEAAGTTQFSFRGRTLDPLKPPQRLTVAEAFERFAGI 180

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL  T+++       L    A +  +  + DD WSDIFS+IL   +EP LG    TIL  
Sbjct: 181 DLLATIESAQGNRDALAAQAAAKTHV--SGDDDWSDIFSKILTAHVEPKLGDGVLTILHE 238

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP+PE+ALA +   DPR  +RFE+Y C +EL N   EL D  EQR RF   M EK++ Y+
Sbjct: 239 YPSPEAALARVQAGDPRVAERFEVYGCGVELANGFGELTDAAEQRRRFISAMDEKERRYH 298

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E YP+DEDFLA L +MP +SG+A+GFDRLVML +GA  +++VIW P
Sbjct: 299 ERYPLDEDFLAALAQMPPASGVALGFDRLVMLASGATRLDQVIWAP 344


>gi|260581653|ref|ZP_05849450.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260095246|gb|EEW79137.1| lysyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|309973672|gb|ADO96873.1| Putative lysyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 333

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 109/339 (32%), Positives = 164/339 (48%), Gaps = 28/339 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W      +    LLKR  I + +R++F E   +E+++  L      + H+  FSTE + 
Sbjct: 16  HWQPSADIKN---LLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLA 72

Query: 69  Q-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
             D+  K L+L TSPE+  K+LLAAG   IF  +  +RN E G  H PEFTMLEWYR H 
Sbjct: 73  PFDNQSKTLWLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNPEFTMLEWYRPHF 132

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
              +L+ +  ++++                        E ++    F  Y  +D      
Sbjct: 133 HMHRLINEVDDLLQ----------------QILDCPPAESLSYQFVFQEYVGLD------ 170

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
            P   +R  L   A++       ++    +   +  E +EP +G      +  +P+ ++A
Sbjct: 171 -PLSAERSELIEAARKHNFMAEDNEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPSTQAA 229

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA + P D R  +RFE Y   +EL N   EL D  EQRHRFE + Q+++K    T  IDE
Sbjct: 230 LAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTREIDE 289

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FLA L   MP +SG+A+G DRL+M+      IN+VI  
Sbjct: 290 RFLAALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 328


>gi|59712940|ref|YP_205716.1| lysyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|59481041|gb|AAW86828.1| predicted lysyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 328

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L +R  I +++R +F + + +E+D+ ++ ++   + H+  F T+ I  
Sbjct: 10  WMPSASIEQ---LQQRADILAAIRSFFFKRKVMEVDTPAMSHATVTDVHLHTFQTDFIGP 66

Query: 70  DHIRKP-LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +     LY  TSPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    
Sbjct: 67  GYADGTHLYFMTSPEFHMKRLLAAGSGCIYQINKAFRNEEAGRYHNPEFTMLEWYRLGFD 126

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM +   ++    +  N                 E +T  EAF +   +        
Sbjct: 127 HHDLMDEMNELLTLVLKCDNA----------------ERMTYQEAFIQVLGV-------C 163

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L   A   G+    D  +    +   +    +E  +G +    +  +PA ++
Sbjct: 164 PLEASMDELRAVAAPLGLSDIADIEEDRDTLLQLLFSMGVEVKIGQDVPAFVYDFPASQA 223

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P+DPR  +RFE+Y   IEL N   EL +  EQ  RFE++  ++K +     PID
Sbjct: 224 ALAKINPSDPRVAERFEVYFKGIELANGFHELDNAKEQLMRFEEDNAKRKSMGLTEQPID 283

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              +A L   +P  SG+A+G DRL+ML  G  +I++V   PF ++
Sbjct: 284 YHLIAALEAGLPNCSGVALGIDRLIMLAMGEKHIDQVTAFPFDRA 328


>gi|68057630|gb|AAX87883.1| putative lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|309751502|gb|ADO81486.1| Putative lysyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 333

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 162/339 (47%), Gaps = 28/339 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W      +    LLKR  I + +R++F E   +E+++  L      + H+  FSTE + 
Sbjct: 16  HWQPSADIKN---LLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLA 72

Query: 69  Q-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                 K L+L TSPE+  K+LLAAG   IF  +  +RN E G  H PEFTMLEWYR H 
Sbjct: 73  PFGEQSKTLWLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNPEFTMLEWYRPHF 132

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
              +L+ +  ++++                        E ++    F  Y  +D      
Sbjct: 133 HMHRLINEVDDLLQ----------------QILDCPPAESLSYQFVFQEYVGLD------ 170

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
            P   +R  L   A++       ++    +   +  E +EP +G      +  +P+ ++A
Sbjct: 171 -PLSAERSELIEAARKHNFMAEDNEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPSTQAA 229

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA + P D R  +RFE Y   +EL N   EL D  EQRHRFE + Q+++K    T  IDE
Sbjct: 230 LAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTREIDE 289

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FLA L   MP +SG+A+G DRL+M+      IN+VI  
Sbjct: 290 RFLAALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 328


>gi|115380061|ref|ZP_01467105.1| lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115362936|gb|EAU62127.1| lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 477

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 82/330 (24%), Positives = 139/330 (42%), Gaps = 21/330 (6%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              LKRN +   +RE+     +IE+++ 
Sbjct: 154 LRPLPEKWHGLTDVEIRYRQRYLDLVSNPEVKQTFLKRNKLVRFIREFLDSRDYIEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +          R F T     + +   LY++ +PE   K+L+  G E+++     +RN 
Sbjct: 214 MMHPLVSGAA-ARPFKTH---HNALDIELYMRIAPELYLKRLVVGGIERVYEINRNFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+ +YE LM     +I  AA+         +Q    +     +
Sbjct: 270 GISTRHNPEFTMLEFYQAYATYEDLMDLTEQMISEAAQAVTGATKVPYQGHELDFGKGWK 329

Query: 167 YITVAEAFAR-YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            I + EA             + +PD+    LL     +A  R        ++   +    
Sbjct: 330 RIPMTEAIREAVGGALSDKDMADPDKLRHELLKTSHGEAERRAIETMNQGELVGALFEAH 389

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E    +   T +  +P   S LA     +P  T RFEL+    E+ NA  EL DP++Q+
Sbjct: 390 VEQK--LIHPTFITHFPTSVSPLARRNDQNPEITDRFELFVAGREIANAFSELNDPLDQK 447

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
            RF  +++ K++   ET   DED++  L  
Sbjct: 448 GRFLGQLEAKQRGQQETMDYDEDYIRALEH 477


>gi|303253392|ref|ZP_07339535.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307246448|ref|ZP_07528521.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307248573|ref|ZP_07530588.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307255431|ref|ZP_07537238.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307259883|ref|ZP_07541597.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|302647737|gb|EFL77950.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306852652|gb|EFM84884.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306854923|gb|EFM87111.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306861615|gb|EFM93602.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306866053|gb|EFM97927.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 327

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 158/326 (48%), Gaps = 25/326 (7%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYLQT 80
           L+KR+ I + +R++F +   +E+++ +L      + H+  FST+ +       K L+L T
Sbjct: 20  LIKRSKIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFSSEAKTLHLMT 79

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H    +L+ +  +++
Sbjct: 80  SPEYHMKRLLAAGSGAIFQLCRVFRNEEAGKRHNPEFTMLEWYRPHFDMYRLINEVDDLL 139

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +                        E  +    F  Y  +D       P    R  L  +
Sbjct: 140 Q----------------QILDCEPAESYSYQFVFQTYVGLD-------PLSATRAQLVEK 176

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A++ G     D+    +   +  E +E N+G    T +  +P+ ++ALA I   D R  +
Sbjct: 177 ARKHGFPCEDDENRDTLLQFLFSEIVEANIGKERPTAVYHFPSSQAALAQISSEDHRVAE 236

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
           RFE+Y   +EL N   EL D  EQ  RFE++  ++ ++      +D  FLA L   +P  
Sbjct: 237 RFEVYYQGLELANGFHELSDTKEQMRRFEQDNVQRAQMGLPAQQLDSRFLAALKAGIPNC 296

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWT 345
           SG+A+G DRL+M+   A  I+EV+  
Sbjct: 297 SGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|307257600|ref|ZP_07539360.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306863903|gb|EFM95826.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 327

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 158/326 (48%), Gaps = 25/326 (7%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYLQT 80
           L+KR+ I + +R++F +   +E+++ +L      + H+  FST+ +       K L+L T
Sbjct: 20  LIKRSKIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFSSEAKTLHLMT 79

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H    +L+ +  +++
Sbjct: 80  SPEYHMKRLLAAGSGAIFQLCRVFRNEEAGKRHNPEFTMLEWYRPHFDMYRLINEVDDLL 139

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +                        E  +    F  Y  +D       P    R  L  +
Sbjct: 140 Q----------------QILDCEPAESYSYQFVFQTYVGLD-------PLSATRAKLVEK 176

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A++ G     D+    +   +  E +E N+G    T +  +P+ ++ALA I   D R  +
Sbjct: 177 ARKHGFPCEDDENRDTLLQFLFSEIVEANIGKERPTAVYHFPSSQAALAQISSEDHRVAE 236

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
           RFE+Y   +EL N   EL D  EQ  RFE++  ++ ++      +D  FLA L   +P  
Sbjct: 237 RFEVYYQGLELANGFHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLAALKAGIPNC 296

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWT 345
           SG+A+G DRL+M+   A  I+EV+  
Sbjct: 297 SGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|190150860|ref|YP_001969385.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307262013|ref|ZP_07543668.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|307264210|ref|ZP_07545801.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|189915991|gb|ACE62243.1| putative lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306868296|gb|EFN00118.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306870456|gb|EFN02209.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 327

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 158/326 (48%), Gaps = 25/326 (7%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYLQT 80
           L+KR+ I + +R++F +   +E+++ +L      + H+  FST+ +       K L+L T
Sbjct: 20  LIKRSKIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFSSEAKTLHLMT 79

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H    +L+ +  +++
Sbjct: 80  SPEYHMKRLLAAGSGAIFQLCRVFRNEEAGKRHNPEFTMLEWYRPHFDMYRLINEVDDLL 139

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +                        E  +    F  Y  +D       P    R  L  +
Sbjct: 140 Q----------------QILDCEPAESYSYQFVFQTYVGLD-------PLSATRAQLVEK 176

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A++ G     D+    +   +  E +E N+G    T +  +P+ ++ALA I   D R  +
Sbjct: 177 ARKHGFPCEDDENRDTLLQFLFSEIVEANIGKERPTAVYHFPSSQAALAQISSEDHRVAE 236

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
           RFE+Y   +EL N   EL D  EQ  RFE++  ++ ++      +D  FLA L   +P  
Sbjct: 237 RFEVYYQGLELANGFHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLAALKAGIPNC 296

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWT 345
           SG+A+G DRL+M+   A  I+EV+  
Sbjct: 297 SGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|254576865|ref|XP_002494419.1| ZYRO0A01034p [Zygosaccharomyces rouxii]
 gi|238937308|emb|CAR25486.1| ZYRO0A01034p [Zygosaccharomyces rouxii]
          Length = 501

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 74/331 (22%), Positives = 144/331 (43%), Gaps = 8/331 (2%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L+ R+ +  ++RE+     F+E+++  L       +   AF T         K L L+
Sbjct: 165 EMLVTRHKVTRAVREFLDGRDFVEVETPILSNKANGAS-AEAFVTYSNALPENEKRLELR 223

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G E+++     +RN      H PEFT LE+Y+A+ + E L+++  ++
Sbjct: 224 VAPELWLKRLIIGGLERVYELGKVFRNEGIDATHNPEFTTLEFYQAYVTMEDLIENVRDM 283

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG--TTLDNPDQPDRHLL 197
           +       +    + + ++       + +   +  ++    D        NP+       
Sbjct: 284 LVHICSAVSGLPMAQRLLSELQTKGLQRLDFVDTLSKETGTDFHGIQDWSNPELLWEATP 343

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADP 256
                +         + S +++R+    +E  +    C T++  +P+  S LA     D 
Sbjct: 344 IKDRSKLFPEGPQALSPSQMWNRLGGYYVEDRHCNGLCPTLVCNHPSIISPLAKPN--DN 401

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ-EKKKIYNETYPIDEDFLACLT- 314
           R +KRFE++    E  NA +E   P  Q   F+ + Q   +    E+  +DE ++  +  
Sbjct: 402 RLSKRFEMFIGGKEYINAYEEENCPQRQLQSFKDQAQSLLQYGDKESLSVDEAYVEAMKW 461

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            MP + G+ +G DRLV L+ G+  I EV+  
Sbjct: 462 GMPPTGGVGLGIDRLVALLLGSTRIEEVLAF 492


>gi|32034933|ref|ZP_00135024.1| COG2269: Truncated, possibly inactive, lysyl-tRNA synthetase (class
           II) [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|126208994|ref|YP_001054219.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|126097786|gb|ABN74614.1| putative lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 327

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 158/326 (48%), Gaps = 25/326 (7%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYLQT 80
           L+KR+ I + +R++F +   +E+++ +L      + H+  FST+ +       K L+L T
Sbjct: 20  LIKRSKIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFSSEAKTLHLMT 79

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H    +L+ +  +++
Sbjct: 80  SPEYHMKRLLAAGSGAIFQLCRVFRNEEAGKRHNPEFTMLEWYRPHFDMYRLINEVDDLL 139

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +                        E  +    F  Y  +D       P    R  L  +
Sbjct: 140 Q----------------QILDCEPAESYSYQFVFQTYVGLD-------PLSATRAQLVEK 176

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A++ G     D+    +   +  E +E N+G    T +  +P+ ++ALA I   D R  +
Sbjct: 177 ARKHGFPCEDDENRDTLLQFLFSEIVEANIGKERPTAVYHFPSSQAALAQISSEDNRVAE 236

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
           RFE+Y   +EL N   EL D  EQ  RFE++  ++ ++      +D  FLA L   +P  
Sbjct: 237 RFEVYYQGLELANGFHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLAALKAGIPNC 296

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWT 345
           SG+A+G DRL+M+   A  I+EV+  
Sbjct: 297 SGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|148261361|ref|YP_001235488.1| lysine--tRNA ligase [Acidiphilium cryptum JF-5]
 gi|326404848|ref|YP_004284930.1| hypothetical protein ACMV_27010 [Acidiphilium multivorum AIU301]
 gi|146403042|gb|ABQ31569.1| Lysine--tRNA ligase [Acidiphilium cryptum JF-5]
 gi|325051710|dbj|BAJ82048.1| hypothetical protein ACMV_27010 [Acidiphilium multivorum AIU301]
          Length = 329

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 126/336 (37%), Positives = 186/336 (55%), Gaps = 14/336 (4%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W+ D    R PFL +R ++  + R +F    +IE+++  L  +PG E H+ A ST +   
Sbjct: 6   WDPDRLAARLPFLRRRGLLAQATRAFFTARGYIEVETPCLVPAPGEEVHLAALSTIVHAP 65

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
           D      +L TSPEF+ KKLLA G  ++F  A  WR+ E    H PEFTMLEWYR    +
Sbjct: 66  DGAAARKWLHTSPEFAMKKLLAGGAGRMFQLARVWRDHEGSDTHAPEFTMLEWYRPGADF 125

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             ++++   ++R                     +  E ++VAEAFAR+  +D+  ++ + 
Sbjct: 126 SSMIEETTQLLRAVLPPVVT-----CRGVTTDLAAIEVLSVAEAFARHCGVDVLASVGDA 180

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
           D+         A  AG+     + W D+F R+++ +IEP+LG    T L  +PAP +ALA
Sbjct: 181 DR--------LAADAGVARRDGEDWEDLFFRLMLGRIEPHLGRQNPTFLTDWPAPLAALA 232

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN-ETYPIDED 308
                DPR  +RFELY C +EL NA  EL DP+EQR RFE +   +  +Y  E +P+DED
Sbjct: 233 RRRADDPRVAERFELYVCGMELANAFAELTDPVEQRARFEADRARRHALYGREDWPLDED 292

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           F+A +  MP  +GIA+GFDRL M+  GA  I +V+W
Sbjct: 293 FVAAVGRMPDCAGIALGFDRLAMIAAGAARITDVLW 328


>gi|145634751|ref|ZP_01790459.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|229844704|ref|ZP_04464843.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|145267917|gb|EDK07913.1| lysyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|229812418|gb|EEP48108.1| lysyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 323

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 109/339 (32%), Positives = 164/339 (48%), Gaps = 28/339 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W      +    LLKR  I + +R++F E   +E+++  L      + H+  FSTE + 
Sbjct: 6   HWQPSADIKN---LLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLA 62

Query: 69  Q-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
             D+  K L+L TSPE+  K+LLAAG   IF  +  +RN E G  H PEFTMLEWYR H 
Sbjct: 63  PFDNQSKTLWLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNPEFTMLEWYRPHF 122

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
              +L+ +  ++++                        E ++    F  Y  +D      
Sbjct: 123 HMHRLINEVDDLLQ----------------QILDCPPAESLSYQFVFQEYVGLD------ 160

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
            P   +R  L   A++       ++    +   +  E +EP +G      +  +P+ ++A
Sbjct: 161 -PLSAERSELIEAARKHNFMAEDNEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPSTQAA 219

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA + P D R  +RFE Y   +EL N   EL D  EQRHRFE + Q+++K    T  IDE
Sbjct: 220 LAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTREIDE 279

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FLA L   MP +SG+A+G DRL+M+      IN+VI  
Sbjct: 280 RFLAALEEGMPDTSGVALGIDRLMMIALDCEKINDVISF 318


>gi|260579928|ref|ZP_05847758.1| lysyl-tRNA synthetase analog [Haemophilus influenzae RdAW]
 gi|260093212|gb|EEW77145.1| lysyl-tRNA synthetase analog [Haemophilus influenzae RdAW]
          Length = 333

 Score =  243 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 162/339 (47%), Gaps = 28/339 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W      +    LLKR  I + +R++F E   +E+++  L      + H+  FSTE + 
Sbjct: 16  HWQPSADIKN---LLKRAKIIAKIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLA 72

Query: 69  Q-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                 K L+L TSPE+  K+LLAAG   IF  +  +RN E G  H PEFTMLEWYR H 
Sbjct: 73  PFGEQSKTLWLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNPEFTMLEWYRPHF 132

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
              +L+ +  ++++                        E ++    F  Y  +D      
Sbjct: 133 HMHRLINEVDDLLQ----------------QILDCPPAESLSYQFVFQEYVGLD------ 170

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
            P   +R  L   A++       ++    +   +  E +EP +G      +  +P+ ++A
Sbjct: 171 -PLSAERSELIEAARKHNFMAEDNEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPSTQAA 229

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA + P D R  +RFE Y   +EL N   EL D  EQRHRFE + Q+++K    T  IDE
Sbjct: 230 LAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTREIDE 289

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FLA L   MP +SG+A+G DRL+M+      IN+VI  
Sbjct: 290 RFLAALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 328


>gi|254230269|ref|ZP_04923659.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio sp. Ex25]
 gi|262393012|ref|YP_003284866.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937206|gb|EDN56074.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio sp. Ex25]
 gi|262336606|gb|ACY50401.1| lysyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 323

 Score =  243 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 95/342 (27%), Positives = 164/342 (47%), Gaps = 30/342 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L +R  + +S+R++F + Q +E+D+ ++ ++   + H+  F TE +  
Sbjct: 5   WQPTASIDQ---LRQRATLIASIRQFFADRQVMEVDTPAMSHATVTDIHLHTFQTEFVGP 61

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +     L+  TSPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    
Sbjct: 62  GYADGSKLFFMTSPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNPEFTMLEWYRVGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           + +LM +  ++++   +                    + +T  +AF     +        
Sbjct: 122 HHKLMDEMDDLLQLVLKCGAA----------------QRMTYQQAFIDVLGV-------C 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L   A + G+      ++    +   +    +E  +G +    +  +PA ++
Sbjct: 159 PLEGSMTELKAAASKLGLSDIAEPEEDRDTLLQLLFSVGVEHKIGQDVPAFVYDFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P D R   RFE+Y   +EL N   EL +P EQ  RFE++  ++  +  +  PID
Sbjct: 219 ALAKINPQDHRVADRFEVYFKGVELANGFHELDNPKEQLARFEQDNAKRLDMGLKPQPID 278

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++ L   +P  +G+A+G DRL+ML  G ++I++V   PF
Sbjct: 279 YHLISALEAGLPDCAGVALGIDRLIMLALGCDHIDQVTAFPF 320


>gi|165976960|ref|YP_001652553.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|165877061|gb|ABY70109.1| lysine--tRNA ligase [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
          Length = 327

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 159/326 (48%), Gaps = 25/326 (7%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYLQT 80
           L+KR+ I + +R++F +   +E+++ +L      + H+  FST+ +       K L+L T
Sbjct: 20  LIKRSKIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFSSEAKTLHLMT 79

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H    +L+ +  +++
Sbjct: 80  SPEYHMKRLLAAGSGAIFQLCRVFRNEEAGKRHNPEFTMLEWYRPHFDMYRLINEVDDLL 139

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +                        E  +    F  Y  +D       P    R  L  +
Sbjct: 140 Q----------------QILDCEPAESYSYQFVFQTYVGLD-------PLSATRAQLVEK 176

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A++ G    +D+    +   +  E +E N+G    T +  +P+ ++ALA I   D R  +
Sbjct: 177 ARKHGFPCEYDENRDTLLQFLFSEIVEANIGKERPTAVYHFPSSQAALAQISSEDHRVAE 236

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
           RFE+Y   +EL N   EL D  EQ  RFE++  ++ ++      +D  FLA L   +P  
Sbjct: 237 RFEVYYQGLELANGFHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLAALKAGIPNC 296

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWT 345
           SG+A+G DRL+M+   A  I+EV+  
Sbjct: 297 SGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|330991008|ref|ZP_08314962.1| hypothetical protein SXCC_00917 [Gluconacetobacter sp. SXCC-1]
 gi|329761829|gb|EGG78319.1| hypothetical protein SXCC_00917 [Gluconacetobacter sp. SXCC-1]
          Length = 339

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 124/338 (36%), Positives = 185/338 (54%), Gaps = 16/338 (4%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
             +      R PFLL+RN++   +R +F    ++E+++     +PG E H++ F+TE   
Sbjct: 8   HSDPARIADRLPFLLRRNLVLRGIRAFFDARGYVEVETPCAVPTPGEEVHLKVFATERAG 67

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            D  R+ L+L TSPEF+ K+++AA    ++  A  WRN E G LH  EFTMLEWYR   +
Sbjct: 68  ADGTRQKLWLHTSPEFAMKRIVAATGLPVYQLARVWRNAEGGRLHAHEFTMLEWYRPGAT 127

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
              LM +   ++R              N      +  E + VA+AF R+A +D+  T  +
Sbjct: 128 LAGLMDETEALLRAVLPPV----VRVGNDTIGIAAPFERLRVADAFHRHAGVDILATEGD 183

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                       A+ AG  +   +TW D+F R+++ ++EP++G    T L  +PA ++AL
Sbjct: 184 --------GPALARDAGCALRPGETWEDLFFRLMMARVEPHIGRTRPTFLTHWPASQAAL 235

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET----YP 304
           A   PADPR   RFELYA  IEL NA +EL D  EQR RF  +   ++ +Y +     +P
Sbjct: 236 ARSDPADPRVALRFELYAGGIELANAFEELTDSAEQRARFMADRARRRVLYPDESGLDWP 295

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           +DE FLA L  +P  +GIA+GFDRLVML  G + I +V
Sbjct: 296 MDEAFLAALDRLPPCAGIALGFDRLVMLAAGTSRIADV 333


>gi|158424020|ref|YP_001525312.1| lysyl-tRNA synthetase protein [Azorhizobium caulinodans ORS 571]
 gi|158330909|dbj|BAF88394.1| lysyl-tRNA synthetase protein [Azorhizobium caulinodans ORS 571]
          Length = 382

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 173/342 (50%), Positives = 226/342 (66%), Gaps = 1/342 (0%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
            PWW+   H  RRPFLL R  I +++R  F    F+E+++  LQ SPGNE H+ AF+T  
Sbjct: 38  SPWWHPSVHEDRRPFLLARARIAAAIRADFAARDFLEVETPVLQVSPGNEAHLHAFATLW 97

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
              +    P YL+TSPEF+ KKLLAAGE +IF FA  +R+ E+G  H PEFTMLEWYRA 
Sbjct: 98  RRPEGGTLPYYLRTSPEFAAKKLLAAGEPRIFEFARVFRDRERGTTHHPEFTMLEWYRAR 157

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
           E YE LM+DC+ ++R A+       FSF+  +C+PF+E E +T+  AFAR+A IDL   L
Sbjct: 158 EPYETLMEDCVRLLRLASNAGGISGFSFRGRSCDPFAEAERLTLVAAFARHAGIDLSRFL 217

Query: 187 DNP-DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
             P  +P+          AGIR A DDTW+D+FSR+L+EK+EP+LG    T+L  YP  E
Sbjct: 218 APPGHEPEAAPFAEAVAAAGIRTAPDDTWADLFSRVLVEKVEPHLGDGRPTLLCEYPTSE 277

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA    ADPR  +RFELYAC +EL NA  EL DP+EQR RFE EM EK ++Y E YPI
Sbjct: 278 AALARPTVADPRVAERFELYACGVELANAFGELTDPVEQRRRFEIEMAEKARLYGERYPI 337

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DE  L  L  MP++SG A+GFDRL ML +GA  +++++W P 
Sbjct: 338 DEGLLEALEHMPEASGCALGFDRLAMLASGARRLDDMLWAPV 379


>gi|145628264|ref|ZP_01784065.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145630585|ref|ZP_01786365.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145636603|ref|ZP_01792270.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145638361|ref|ZP_01793971.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|148828021|ref|YP_001292774.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|161761274|ref|YP_248543.2| lysyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|166229785|sp|A5UHY5|SYK3_HAEIG RecName: Full=Uncharacterized protein YjeA
 gi|144980039|gb|EDJ89698.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144983975|gb|EDJ91417.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145270129|gb|EDK10065.1| lysyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145272690|gb|EDK12597.1| lysyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|148719263|gb|ABR00391.1| lysyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 323

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 162/339 (47%), Gaps = 28/339 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W      +    LLKR  I + +R++F E   +E+++  L      + H+  FSTE + 
Sbjct: 6   HWQPSADIKN---LLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLA 62

Query: 69  Q-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                 K L+L TSPE+  K+LLAAG   IF  +  +RN E G  H PEFTMLEWYR H 
Sbjct: 63  PFGEQSKTLWLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNPEFTMLEWYRPHF 122

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
              +L+ +  ++++                        E ++    F  Y  +D      
Sbjct: 123 HMHRLINEVDDLLQ----------------QILDCPPAESLSYQFVFQEYVGLD------ 160

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
            P   +R  L   A++       ++    +   +  E +EP +G      +  +P+ ++A
Sbjct: 161 -PLSAERSELIEAARKHNFMAEDNEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPSTQAA 219

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA + P D R  +RFE Y   +EL N   EL D  EQRHRFE + Q+++K    T  IDE
Sbjct: 220 LAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTREIDE 279

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FLA L   MP +SG+A+G DRL+M+      IN+VI  
Sbjct: 280 RFLAALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 318


>gi|329114963|ref|ZP_08243718.1| Putative protein YjeA [Acetobacter pomorum DM001]
 gi|326695406|gb|EGE47092.1| Putative protein YjeA [Acetobacter pomorum DM001]
          Length = 341

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 126/342 (36%), Positives = 186/342 (54%), Gaps = 14/342 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFST 64
           P+    + D    R PFLL+RN++    R +      +E+++     +PG E H++ F T
Sbjct: 9   PNPGLKDPDHILDRLPFLLRRNLVWRGTRAFLESRGCVEVETPYAVPTPGEEVHLQPFHT 68

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                D +++ L+L TSPEF+ K+++AA    +F FA  WRNGE   LH PEFTMLEWY+
Sbjct: 69  VRETPDGMQQNLFLHTSPEFAMKRIVAATGLPVFQFARVWRNGEGSYLHAPEFTMLEWYQ 128

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
            + + E LM +   +++              + + +     E +T+ EAF R+A +D   
Sbjct: 129 PNMTLEGLMDETEALLQAVLPPI----LQHSDHSLSISGPFERLTMQEAFHRHAGVD--- 181

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                  P        A+ A   +   +TW D+F R+L+E+IEP +G    T L  +PA 
Sbjct: 182 -----LLPTEGNAQALAKAASCTLREGETWEDLFFRLLMERIEPAIGRTRPTFLTHWPAS 236

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN--ET 302
           ++ALA   P DPR   RFELYA  +EL NA +EL D  EQR RF+ + Q+++ +Y     
Sbjct: 237 QAALARKSPQDPRVALRFELYAAGMELANAFEELTDTTEQRARFKADRQQRQTLYPNRPE 296

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +P+DE  L+ L  MP  SGIA+GFDRLVML  G   I  V+W
Sbjct: 297 WPVDEKLLSALPHMPACSGIALGFDRLVMLACGTTRIQNVLW 338


>gi|315633844|ref|ZP_07889133.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315477094|gb|EFU67837.1| lysine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 323

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 103/338 (30%), Positives = 161/338 (47%), Gaps = 28/338 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W      +    LL R  + + +R +F +   +E+++  L      + H+  FSTE +  
Sbjct: 7   WQPTASIKN---LLDRAKLIAEIRRFFTDRGLLEVETPVLSEFGVTDLHLATFSTEFVSP 63

Query: 70  -DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                K L+L TSPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H  
Sbjct: 64  FGEQSKTLWLSTSPEYHMKRLLAAGSGPIFQIGKVFRNEEAGNRHNPEFTMLEWYRPHFD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +L+ +  ++++                       PE ++   AF +Y  +D       
Sbjct: 124 MYRLINEVDDLLQ----------------QILECPPPESMSYQFAFQQYVGLD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P   +   L  +A++  +  A  +    +   +    +EP +G +C  ++  +PA ++AL
Sbjct: 161 PLSAELSELVEKAKKYQLVDAEKENRDTLLQFLFSTVVEPQIGHDCPVVVYHFPASQAAL 220

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I   D R  +RFE Y   +EL N   EL D  EQ HRFE + ++++K       ID+ 
Sbjct: 221 AQISSEDLRVAERFEFYYKGLELANGFHELADVREQLHRFELDNRQREKAGLPVRDIDKR 280

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            L  L   +P  SG+A+G DRL+M+  GA +I EVI  
Sbjct: 281 LLGALQAGIPDCSGVALGVDRLLMIAMGAESIKEVISF 318


>gi|84386961|ref|ZP_00989985.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84378251|gb|EAP95110.1| lysyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 323

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 97/343 (28%), Positives = 160/343 (46%), Gaps = 26/343 (7%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W      ++   L +R  I + +R++F+E   +E+D+ ++ ++   + H+  F TE +  
Sbjct: 5   WQPAATIKQ---LKQRADILNQIRQFFIERNVMEVDTPAMSHATVTDVHLHTFKTEFVGP 61

Query: 70  DHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +   +PL+  TSPEF  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR    
Sbjct: 62  GYAHGQPLFFMTSPEFHMKRLLAAGSGCIYQICKSFRNEENGRYHNPEFTMLEWYRVGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM +   +++   +  + +  ++Q                      A ID+      
Sbjct: 122 HHDLMDEMDLLLQQVLKSGSAQRMTYQQ---------------------AFIDVLGVCPL 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
            D  D                 ++    +   +    +E  +G      +  +PA ++AL
Sbjct: 161 EDSMDTLKQAAAKLGLSDIADPEEDRDTLLQLLFSIGVEAKIGQQVPAFVYDFPASQAAL 220

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I P DPR   RFE+Y   IEL N   EL  P EQ  RFE +  ++ ++     PID  
Sbjct: 221 AKINPNDPRVADRFEVYFKGIELANGFHELDKPQEQLQRFEGDNAKRIEMGLSPQPIDHH 280

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +  L   +P  +G+A+G DRL+ML  G ++I++V   PF +S
Sbjct: 281 LIEALKAGLPDCAGVALGIDRLIMLALGYDHIDDVTAFPFPRS 323


>gi|15602067|ref|NP_245139.1| lysyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|13431891|sp|P57824|SYK3_PASMU RecName: Full=Uncharacterized protein YjeA
 gi|12720425|gb|AAK02286.1| LysU [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 323

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 103/338 (30%), Positives = 159/338 (47%), Gaps = 28/338 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LL R  I + +R +F +   +E+++  L      + H+  F+T  I  
Sbjct: 7   WQPSASI---ENLLARAKIIAEIRRFFTDRGLLEVETPVLSEFGVTDVHLSTFNTTFISP 63

Query: 70  DHIRKP-LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
              +   L+L TSPE+  K+LLAAG   IF   H +RN E G  H PEFTMLEWYR H  
Sbjct: 64  TAEKSKALWLSTSPEYHMKRLLAAGSGPIFQLCHVFRNEEAGQRHNPEFTMLEWYRPHFD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +L+ +  ++++                        E ++    F  Y  +D       
Sbjct: 124 MYRLINEVDDLLQ----------------QILDCKPTESLSYQFVFQEYVGLD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P   ++  L  +A+Q  ++ A  +    +   +    +EPN+G      +  +PA ++AL
Sbjct: 161 PLSAEKAELVAKAKQYHLQQAEQEDRDTLLQFLFSTVVEPNIGKENPVAVYHFPATQAAL 220

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I   D R  +RFE Y   +EL N   EL D  EQ HRFE++  +++K+      ID+ 
Sbjct: 221 AQISSEDHRVAERFEFYYKGLELANGFHELTDVNEQLHRFEQDNVQRQKMGLPQRQIDKR 280

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            L  L   +P  SGIA+G DRL+M+  GAN I+EV+  
Sbjct: 281 LLGALQAGVPNCSGIALGVDRLLMIALGANAIHEVMAF 318


>gi|329122843|ref|ZP_08251415.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327472107|gb|EGF17545.1| lysine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 333

 Score =  242 bits (617), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 162/339 (47%), Gaps = 28/339 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W      +    LLKR  I + +R++F E   +E+++  L      + H+  FSTE + 
Sbjct: 16  HWQPSADIKN---LLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLA 72

Query: 69  Q-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                 K L+L TSPE+  K+LLAAG   IF  +  +RN E G  H PEFTMLEWYR H 
Sbjct: 73  PFGEQSKTLWLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNPEFTMLEWYRPHF 132

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
              +L+ +  ++++                        E ++    F  Y  +D      
Sbjct: 133 HMHRLINEVDDLLQ----------------QILDCPPAESLSYQFVFQEYVGLD------ 170

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
            P   +R  L   A++       ++    +   +  E +EP +G      +  +P+ ++A
Sbjct: 171 -PLSAERSELIEAARKHNFMAEDNEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPSTQAA 229

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA + P D R  +RFE Y   +EL N   EL D  EQRHRFE + Q+++K    T  IDE
Sbjct: 230 LAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTREIDE 289

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FLA L   MP +SG+A+G DRL+M+      IN+VI  
Sbjct: 290 RFLAALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 328


>gi|297581491|ref|ZP_06943414.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534329|gb|EFH73167.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 349

 Score =  242 bits (617), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 164/333 (49%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   + +   L+L T
Sbjct: 40  LKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSALHLMT 99

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 100 SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 159

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P + +   L   
Sbjct: 160 QLVLRCGSA----------------ERMTYQEAFLNVLGV-------CPLEGEMRELKQV 196

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I PADPR 
Sbjct: 197 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPADPRV 256

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 257 AERFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLP 316

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 317 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 349


>gi|77166083|ref|YP_344608.1| lysyl-tRNA synthetase-related protein [Nitrosococcus oceani ATCC
           19707]
 gi|76884397|gb|ABA59078.1| Lysyl-tRNA synthetase-related protein [Nitrosococcus oceani ATCC
           19707]
          Length = 356

 Score =  242 bits (617), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 98/347 (28%), Positives = 152/347 (43%), Gaps = 30/347 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W        +  L  R  + + +R +F     +E+++  L  +     H+ +  T     
Sbjct: 32  WRPQAD---KKALEARAQLLADIRHFFARRGVLEVETPILSTAAATAPHLHSLVTTYQGP 88

Query: 70  DHI--RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                 + L+LQTSPE + K+LLAAG   I+  A  +RNGE G  H PEFT+LEWYR   
Sbjct: 89  QAPKEGQQLFLQTSPEHAMKRLLAAGSGPIYQIARVFRNGESGRRHNPEFTLLEWYRPGF 148

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
            +  LM++   ++      +                  E ++  E F RY  ID+ T  D
Sbjct: 149 DHLALMEEVDILLSLLLGTSAG----------------ERLSYREVFHRYLGIDVFTASD 192

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                    L        +  +           +L   IEP LG      +  YPA ++ 
Sbjct: 193 ----KTLARLANVQGFHDVAASGGQARQIYLDFLLANVIEPQLGQERPCFIYDYPASDAQ 248

Query: 248 LANIYPADPRF----TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
           LA I P          +RFE+Y   +EL N   EL D +EQR RF  ++ ++K+      
Sbjct: 249 LARIRPPSESCSRPLAERFEVYLKGMELANGYHELCDAVEQRQRFGADLIQRKRGGLSEV 308

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           P+D+  LA L   +P  +G+A+G DRL+ML+  +  I EV+  P  +
Sbjct: 309 PMDKFLLAALEQGLPACAGVALGVDRLLMLLLNSARIEEVLAFPLIR 355


>gi|15642650|ref|NP_232283.1| lysyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587927|ref|ZP_01677682.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 2740-80]
 gi|121727606|ref|ZP_01680714.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae V52]
 gi|147673524|ref|YP_001218145.1| lysyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153819799|ref|ZP_01972466.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae NCTC 8457]
 gi|153821548|ref|ZP_01974215.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae B33]
 gi|227082771|ref|YP_002811322.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae M66-2]
 gi|254851191|ref|ZP_05240541.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298500526|ref|ZP_07010330.1| lysyl-tRNA synthetase GenX [Vibrio cholerae MAK 757]
 gi|9657247|gb|AAF95796.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121547832|gb|EAX57918.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 2740-80]
 gi|121630097|gb|EAX62502.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae V52]
 gi|126509660|gb|EAZ72254.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae NCTC 8457]
 gi|126520933|gb|EAZ78156.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae B33]
 gi|146315407|gb|ABQ19946.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae O395]
 gi|227010659|gb|ACP06871.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae M66-2]
 gi|227014543|gb|ACP10753.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae O395]
 gi|254846896|gb|EET25310.1| lysyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297540695|gb|EFH76752.1| lysyl-tRNA synthetase GenX [Vibrio cholerae MAK 757]
          Length = 349

 Score =  242 bits (617), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 163/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   + +   L+L T
Sbjct: 40  LKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSALHLMT 99

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 100 SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 159

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P + +   L   
Sbjct: 160 QLVLRCGSA----------------ERMTYQEAFLNVLGV-------CPLEEEMRELKQV 196

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I PADPR 
Sbjct: 197 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPADPRV 256

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 257 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLP 316

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 317 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 349


>gi|254435727|ref|ZP_05049234.1| lysyl-tRNA synthetase family protein [Nitrosococcus oceani AFC27]
 gi|207088838|gb|EDZ66110.1| lysyl-tRNA synthetase family protein [Nitrosococcus oceani AFC27]
          Length = 332

 Score =  241 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 98/347 (28%), Positives = 152/347 (43%), Gaps = 30/347 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W        +  L  R  + + +R +F     +E+++  L  +     H+ +  T     
Sbjct: 8   WRPQAD---KKALEARAQLLADIRHFFARRGVLEVETPILSTAAATAPHLHSLVTTYQGP 64

Query: 70  DHI--RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                 + L+LQTSPE + K+LLAAG   I+  A  +RNGE G  H PEFT+LEWYR   
Sbjct: 65  QAPKEGQQLFLQTSPEHAMKRLLAAGSGPIYQIARVFRNGESGRRHNPEFTLLEWYRPGF 124

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
            +  LM++   ++      +                  E ++  E F RY  ID+ T  D
Sbjct: 125 DHLALMEEVDILLSLLLGTSAG----------------ERLSYREVFHRYLGIDVFTASD 168

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                    L        +  +           +L   IEP LG      +  YPA ++ 
Sbjct: 169 ----KTLARLANVQGFHDVAASGGQARQIYLDFLLANVIEPQLGQERPCFIYDYPASDAQ 224

Query: 248 LANIYPADPRF----TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
           LA I P          +RFE+Y   +EL N   EL D +EQR RF  ++ ++K+      
Sbjct: 225 LARIRPPSESCSRPLAERFEVYLKGMELANGYHELCDAVEQRQRFGADLIQRKRGGLSEV 284

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           P+D+  LA L   +P  +G+A+G DRL+ML+  +  I EV+  P  +
Sbjct: 285 PMDKFLLAALEQGLPACAGVALGVDRLLMLLLNSARIEEVLAFPLIR 331


>gi|52425688|ref|YP_088825.1| lysyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81386826|sp|Q65S20|SYK3_MANSM RecName: Full=Uncharacterized protein YjeA
 gi|52307740|gb|AAU38240.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 323

 Score =  241 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 103/338 (30%), Positives = 160/338 (47%), Gaps = 28/338 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W      +    L  R  I   +R++F E   +E+++  L      + H+  F+TE I  
Sbjct: 7   WQPSAPIK---TLFTRAKIIREIRKFFTERGLLEVETPVLSEFGVTDVHLSTFNTEFIAP 63

Query: 70  -DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                K L+L TSPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H  
Sbjct: 64  IGENSKTLWLMTSPEYHMKRLLAAGSGAIFQICRVFRNEEAGSRHNPEFTMLEWYRPHFD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +L+ +  ++++   +    + FS+Q V                F +Y  +D       
Sbjct: 124 MYRLINEVDDLLQQILDCEPAESFSYQFV----------------FQQYVGLD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P    R  L  +A++       ++    +   +    +EP +G     ++  +PA ++AL
Sbjct: 161 PLSAPRAELVAKAREHHFMCDENEERDTLLEFLFSTVVEPQIGQTRPAVIYHFPASQAAL 220

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I   D R  +RFE Y   +EL N  +EL D  EQ  RFE++ ++++K+      ID+ 
Sbjct: 221 AQISSEDHRVAERFEFYFKGLELANGFNELTDANEQLIRFERDNRQREKMGLPQRAIDKR 280

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            LA L   MP  +G+A+G DRL+M    AN I EV+  
Sbjct: 281 LLAALEAGMPNCAGVALGVDRLLMAALNANRIEEVMAF 318


>gi|145640943|ref|ZP_01796525.1| lysyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274457|gb|EDK14321.1| lysyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 323

 Score =  241 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 109/339 (32%), Positives = 162/339 (47%), Gaps = 28/339 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W      +    LLKR  I + +R++F E   +E+++  L      + H+  FSTE + 
Sbjct: 6   HWQPSADIKN---LLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLA 62

Query: 69  Q-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                 K L+L TSPE+  K+LLAAG   IF  +  +RN E G  H PEFTMLEWYR H 
Sbjct: 63  PFGEQSKTLWLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNPEFTMLEWYRPHF 122

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
              +L+ +  ++++                        E ++    F  Y  +D      
Sbjct: 123 HMHRLINEVDDLLQ----------------QILDCPPAESLSYQFVFQEYVGLD------ 160

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
            P   +R  L   A++       D+    +   +  E +EP +G      +  +P+ ++A
Sbjct: 161 -PLSAERSELIEAARKHNFMAEDDEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPSTQAA 219

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA + P D R  +RFE Y   +EL N   EL D  EQRHRFE + Q+++K    T  IDE
Sbjct: 220 LAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTREIDE 279

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FLA L   MP +SG+A+G DRL+M+      IN+VI  
Sbjct: 280 RFLAALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 318


>gi|254225395|ref|ZP_04919006.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae V51]
 gi|125622029|gb|EAZ50352.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae V51]
          Length = 349

 Score =  241 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 102/352 (28%), Positives = 167/352 (47%), Gaps = 30/352 (8%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
            + +   W       +   L +R  +   +RE+F E   +E+++ ++ ++   + H+  F
Sbjct: 24  PLMTNSDWMPTASISQ---LKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTF 80

Query: 63  STELIIQDHIRKP-LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
            TE +   + +   L+L TSPEF  K+LLAAG   I+    A+RN E G  H PEFTMLE
Sbjct: 81  KTEFVGPGYAKGSALHLMTSPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLE 140

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
           WYR    +  LM +   +++      +                 E +T  EAF     + 
Sbjct: 141 WYRIGFDHHALMDEMDALLQLVLRCGSA----------------ERMTYQEAFLNVLGV- 183

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                  P + +   L   A   G+      ++    +   +    IEP +G      + 
Sbjct: 184 ------CPLEGEMRELKQVAATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVY 237

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +PA ++ALA I PADPR   RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++ 
Sbjct: 238 DFPASQAALAKINPADPRVADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMG 297

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
               PID   +A L   +P+ +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 298 LTEQPIDYHLIAALEAGLPECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 349


>gi|91228401|ref|ZP_01262327.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188042|gb|EAS74348.1| lysyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 323

 Score =  241 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 96/342 (28%), Positives = 165/342 (48%), Gaps = 30/342 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L +R  + +S+R++F + Q +E+D+ ++ ++   + H+  F TE +  
Sbjct: 5   WQPTASIDQ---LRQRATLIASIRQFFADRQVMEVDTPAMSHATVTDIHLHTFQTEFVGP 61

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +     L+  TSPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    
Sbjct: 62  GYADGSKLFFMTSPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNPEFTMLEWYRVGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           + +LM +  ++++   +                    + +T  +AF     +        
Sbjct: 122 HHKLMDEMDDLLQLVLKCGAA----------------QRMTYQQAFIDVLGV-------C 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L   A + G+      ++    +   +    +E  +G +    +  +PA ++
Sbjct: 159 PLEGSMTELKAAASKLGLSDIAEPEEDRDTLLQLLFSVGVENKIGQDVPAFVYDFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P D R   RFE+Y   IEL N   EL +P EQ  RFE++  ++ ++  +  PID
Sbjct: 219 ALAKINPQDHRVADRFEVYFKGIELANGFHELDNPKEQLARFEQDNAKRIEMGLKPQPID 278

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++ L   +P  +G+A+G DRL+ML  G ++I++V   PF
Sbjct: 279 YHLISALEAGLPDCAGVALGIDRLIMLALGCDHIDQVTAFPF 320


>gi|258620473|ref|ZP_05715511.1| Lysyl-tRNA synthetase-related protein [Vibrio mimicus VM573]
 gi|258587352|gb|EEW12063.1| Lysyl-tRNA synthetase-related protein [Vibrio mimicus VM573]
          Length = 324

 Score =  241 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 102/333 (30%), Positives = 163/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI-RKPLYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   +     L+L T
Sbjct: 15  LKQRATLLRQIREFFAERDVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSSLHLMT 74

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 75  SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 134

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P + D   L   
Sbjct: 135 QLVLRCGSA----------------ERMTYQEAFLNVLGV-------CPLEGDMSELKQV 171

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G +    +  +PA ++ALA I PADPR 
Sbjct: 172 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQSVPAFVYDFPASQAALAKINPADPRV 231

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 232 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLVEQPIDYHLIAALEAGLP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 292 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 324


>gi|197335731|ref|YP_002157129.1| putative lysyl-tRNA synthetase family protein GenX [Vibrio fischeri
           MJ11]
 gi|197317221|gb|ACH66668.1| putative lysyl-tRNA synthetase family protein GenX [Vibrio fischeri
           MJ11]
          Length = 318

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 103/333 (30%), Positives = 162/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LYLQT 80
           L +R  I +++R +F E + +E+D+ ++ ++   + H+  F T+ I   +     LY  T
Sbjct: 9   LQQRADILTAIRSFFSERKVMEVDTPAMSHATVTDVHLHTFQTDFIGPGYADGTHLYFMT 68

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 69  SPEFHMKRLLAAGSGCIYQINKAFRNEEAGRYHNPEFTMLEWYRIGFDHHNLMDEMNELL 128

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
               +  N                 E +T  EAF +   +        P +     L   
Sbjct: 129 MLVLKCDNA----------------ERMTYQEAFIQVLGV-------CPLEASMDELRAV 165

Query: 201 AQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+    D  +    +   +    +E  +G +    +  +PA ++ALA I P+DPR 
Sbjct: 166 AAPLGLSDIADIEEDRDTLLQLLFSMGVEVKIGQDVPAFVYDFPASQAALAKINPSDPRV 225

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   IEL N   EL +  EQ  RFE++  ++K +     PID   +A L   +P
Sbjct: 226 AERFEVYFKGIELANGFHELDNAKEQLMRFEEDNAKRKSMGLIEQPIDYHLIAALEAGLP 285

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             SG+A+G DRL+ML  G  +I++V   PF ++
Sbjct: 286 NCSGVALGIDRLIMLAMGEKHIDQVTAFPFDRA 318


>gi|261493892|ref|ZP_05990404.1| lysyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495158|ref|ZP_05991622.1| lysyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309228|gb|EEY10467.1| lysyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310494|gb|EEY11685.1| lysyl-tRNA synthetase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 327

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 106/333 (31%), Positives = 167/333 (50%), Gaps = 25/333 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYL 78
           P L++R+ I + +R++F +   +E+++  L      + H+  F+T+         K L+L
Sbjct: 18  PHLIQRSKIITEIRKFFTDRGLLEVETPILSEFSVTDVHLSTFNTQFQSPFSPEAKTLHL 77

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            TSPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H    +L+ +  +
Sbjct: 78  MTSPEYHMKRLLAAGSGPIFQLCKVFRNEEAGKRHNPEFTMLEWYRPHFDMYRLINEVDD 137

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++   +    + FS+Q V                F  Y  +D       P    +  L 
Sbjct: 138 LLQQILDCEPAESFSYQFV----------------FQTYVGLD-------PLSATKAQLV 174

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
            +A++ G++   D+    +   +  E +E N+G    T +  +P+ ++ALA I   D R 
Sbjct: 175 EKARKHGLQCDDDEQRDTLLQFLFSEVVEANIGQERPTAVYHFPSTQAALAQISSEDHRV 234

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE Y   +ELCN   EL D  EQ HRFE++  +++K+  E   +D  FLA L    P
Sbjct: 235 AERFEFYYKGLELCNGFHELDDADEQIHRFEQDNLQREKMGLEPQQLDVRFLAALKAGFP 294

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             SG+A+G DRL+ML   A  I EVI     ++
Sbjct: 295 NCSGVALGVDRLLMLAMDAEKIEEVISFGIEKA 327


>gi|85858716|ref|YP_460918.1| truncated lysyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85721807|gb|ABC76750.1| truncated lysyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 332

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 125/357 (35%), Positives = 175/357 (49%), Gaps = 44/357 (12%)

Query: 1   MHQIPSQPWWNRDFHYR-------RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP 53
           +  +  +     D  Y        +R  L  R  I  S+R +F E  ++E+D+  L  +P
Sbjct: 11  LTDLSPKKLTGEDSRYDEGWRLAGKRETLRLRAEILHSIRRFFRERDYLEVDTPILIPAP 70

Query: 54  GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLH 113
             E+HI A +             YLQTSPE   K+LLAAG  ++F     +R  E+G  H
Sbjct: 71  APESHIDAVACGFQ---------YLQTSPELCMKRLLAAGYPRLFQICSCFREAERGTRH 121

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAE 172
            PEFT+LEWY   + Y  LM++C  ++R  A     ++  +FQ    +  +  E ++V E
Sbjct: 122 LPEFTLLEWYAQGKDYMFLMEECEALLRFLAVTLYGKEEITFQGSRIDLSAPWERLSVNE 181

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
           AF RY  I    TL                             DIF  +L+ +IE  LGI
Sbjct: 182 AFLRYGGISARQTLAE---------------------------DIFDEVLVSRIESRLGI 214

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
              T L  YP   +ALA   P DP   +RFELY   IEL NA  EL+DP+EQ  RFE+  
Sbjct: 215 ERPTFLYDYPVELAALARAKPNDPSLAERFELYVAGIELANAFSELIDPVEQSRRFEEAQ 274

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           QE++ +    YP  E FL  L+ MP S+GIA+G DRLVML+T    I++V+  P  +
Sbjct: 275 QERRALGKSPYPWPERFLRALSAMPPSTGIALGIDRLVMLMTDRAFIDDVVAFPPER 331


>gi|148826519|ref|YP_001291272.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229845887|ref|ZP_04465999.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|166229784|sp|A5UDN8|SYK3_HAEIE RecName: Full=Uncharacterized protein YjeA
 gi|148716679|gb|ABQ98889.1| lysyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229810891|gb|EEP46608.1| lysyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|301169555|emb|CBW29156.1| predicted lysyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 323

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 162/339 (47%), Gaps = 28/339 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W      +    LLKR  I + +R++F E   +E+++  L      + H+  FSTE + 
Sbjct: 6   HWQPSADIKN---LLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLA 62

Query: 69  Q-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                 K L+L TSPE+  K+LLAAG   IF  +  +RN E G  H PEFTMLEWYR H 
Sbjct: 63  PFGEQSKTLWLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNPEFTMLEWYRPHF 122

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
              +L+ +  ++++                        E ++    F  Y  +D      
Sbjct: 123 HMHRLINEVDDLLQ----------------QILDCPPAESLSYQFVFQEYVGLD------ 160

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
            P   +R  L   A++       ++    +   +  E +EP +G      +  +P+ ++A
Sbjct: 161 -PLSAERSELIEAARKHNFMAEDNEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPSTQAA 219

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA + P D R  +RFE Y   +EL N   EL D  EQRHRFE + Q+++K    T  IDE
Sbjct: 220 LAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTREIDE 279

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FLA L   MP +SG+A+G DRL+M+      IN+VI  
Sbjct: 280 RFLAALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 318


>gi|303250999|ref|ZP_07337187.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307250806|ref|ZP_07532735.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307253185|ref|ZP_07535061.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302650156|gb|EFL80324.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306857165|gb|EFM89292.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306859329|gb|EFM91366.1| lysyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 327

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 158/326 (48%), Gaps = 25/326 (7%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYLQT 80
           L+KR+ I + +R++F +   +E+++ +L      + H+  FST+ +       K L+L T
Sbjct: 20  LIKRSKIMAEIRQFFKDRGVLEVETPALSEFSVTDVHLSTFSTQFLSPFSSEAKTLHLMT 79

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H    +L+ +  +++
Sbjct: 80  SPEYHMKRLLAAGSGAIFQLCRVFRNEEAGKHHNPEFTMLEWYRPHFDMYRLINEVDDLL 139

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +                        E  +    F  Y  +D       P    R  L  +
Sbjct: 140 Q----------------QILDCEPAESYSYQFVFQTYVGLD-------PLSATRAQLVEK 176

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A++ G     D+    +   +  E +E N+G    T +  +P+ ++ALA I   D R  +
Sbjct: 177 ARKHGFPCEDDENRDTLLQFLFSEIVEANIGKERPTAVYHFPSSQAALAQISSEDHRVAE 236

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
           RFE+Y   +EL N   EL D  EQ  RFE++  ++ ++      +D  FLA L   +P  
Sbjct: 237 RFEVYYQGLELANGFHELSDAKEQMRRFEQDNVQRAQMGLPAQQLDSRFLAALKAGIPNC 296

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWT 345
           SG+A+G DRL+M+   A  I+EV+  
Sbjct: 297 SGVALGVDRLMMIAMNAEKIDEVMAF 322


>gi|153829478|ref|ZP_01982145.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 623-39]
 gi|254285847|ref|ZP_04960809.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae AM-19226]
 gi|148875061|gb|EDL73196.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 623-39]
 gi|150424029|gb|EDN15968.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae AM-19226]
          Length = 349

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 163/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   + +   L+L T
Sbjct: 40  LKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSALHLMT 99

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 100 SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 159

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P + +   L   
Sbjct: 160 QLVLRCGSA----------------ERMTYQEAFLNVLGV-------CPLEGEMRELKQV 196

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I PADPR 
Sbjct: 197 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPADPRV 256

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 257 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLP 316

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 317 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 349


>gi|319775232|ref|YP_004137720.1| putative lysyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|319897670|ref|YP_004135867.1| lysyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317433176|emb|CBY81550.1| putative lysyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317449823|emb|CBY86031.1| putative lysyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 323

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 162/339 (47%), Gaps = 28/339 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W      +    LLKR  I + +R++F E   +E+++  L      + H+  FSTE + 
Sbjct: 6   HWQPSADIKN---LLKRAKIIAEIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLA 62

Query: 69  Q-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                 K L+L TSPE+  K+LLAAG   IF  +  +RN E G  H PEFTMLEWYR H 
Sbjct: 63  PFGEQSKTLWLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNCHNPEFTMLEWYRPHF 122

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
              +L+ +  ++++                        E ++    F  Y  +D      
Sbjct: 123 HMHRLINEVDDLLQ----------------QILDCPPAESLSYQFVFQEYVGLD------ 160

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
            P   +R  L   A++       ++    +   +  E +EP +G      +  +P+ ++A
Sbjct: 161 -PLSAERSELIEVARKHNFMAEDNEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPSTQAA 219

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA + P D R  +RFE Y   +EL N   EL D  EQRHRFE + Q+++K    T  IDE
Sbjct: 220 LAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTREIDE 279

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FLA L   MP +SG+A+G DRL+M+      IN+VI  
Sbjct: 280 RFLAALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 318


>gi|183179669|ref|ZP_02957880.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MZO-3]
 gi|183013080|gb|EDT88380.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MZO-3]
          Length = 349

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 100/333 (30%), Positives = 163/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LYLQT 80
           L +R  +   +RE+F +   +E+++ ++ ++   + H+  F TE +   + +   L+L T
Sbjct: 40  LKQRATLLRQIREFFADRNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSALHLMT 99

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 100 SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 159

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P + +   L   
Sbjct: 160 QLVLRCGSA----------------ERMTYQEAFLNVLGV-------CPLEGEMRELKQV 196

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I PADPR 
Sbjct: 197 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPADPRV 256

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 257 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLP 316

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 317 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 349


>gi|209696193|ref|YP_002264123.1| lysyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208010146|emb|CAQ80471.1| putative lysyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 328

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 100/345 (28%), Positives = 162/345 (46%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L +R  I + +R +F E + +E+D+ ++ ++   + H+  F T+ +  
Sbjct: 10  WMPSASIEQ---LQQRADILALIRRFFFERKVMEVDTPAMSHATVTDVHLHTFQTDFVGP 66

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +     LY  TSPEF  K+LL+AG   I+    A+RN E G  H PEFTMLEWYR    
Sbjct: 67  GYADGVHLYFMTSPEFHMKRLLSAGSGAIYQINKAFRNEEAGRFHNPEFTMLEWYRPTFD 126

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           + QLM +   +++   +                  + E +T  +AF     +        
Sbjct: 127 HHQLMDEMNELLKLVLKC----------------DDAERMTYQQAFINVLGV-------C 163

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L   A   G+    D  +    +   +    +E  +G      +  +PA ++
Sbjct: 164 PLEASMDELRAVAAPLGLSDIADVEEDRDTLLQLLFSMGVEEKIGQTVPVCVYDFPASQA 223

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P DPR  +RFE+Y   IEL N   EL +  EQ  RFE++  ++K +     PID
Sbjct: 224 ALAKINPEDPRVAERFEVYFKGIELANGFHELDNAKEQLARFEEDNAKRKSMGLIEQPID 283

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              +A L    P  +G+A+G DRL+ML  G  +I++V+  PF ++
Sbjct: 284 YHLIAALEAGFPDCAGVALGIDRLIMLAMGEKHIDQVMAFPFDRA 328


>gi|262401943|ref|ZP_06078508.1| lysyl-tRNA synthetase-related protein [Vibrio sp. RC586]
 gi|262351915|gb|EEZ01046.1| lysyl-tRNA synthetase-related protein [Vibrio sp. RC586]
          Length = 318

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 161/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI-RKPLYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   +     L+L T
Sbjct: 9   LKQRATLLRQIREFFAERDVMEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSSLHLMT 68

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 69  SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHSLMDEMDALL 128

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T   AF     +        P + D   L   
Sbjct: 129 QLVLRCGSA----------------ERMTYQAAFLNVLGV-------CPLEGDMSELKQV 165

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I PADPR 
Sbjct: 166 AAALGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQTAPAFVYDFPASQAALAKINPADPRV 225

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 226 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLAEQPIDYHLIAALEAGLP 285

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 286 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 318


>gi|269966843|ref|ZP_06180916.1| Lysyl-tRNA synthetase-related protein [Vibrio alginolyticus 40B]
 gi|269828510|gb|EEZ82771.1| Lysyl-tRNA synthetase-related protein [Vibrio alginolyticus 40B]
          Length = 323

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 96/342 (28%), Positives = 165/342 (48%), Gaps = 30/342 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L +R  + +S+R++F + Q +E+D+ ++ ++   + H+  F TE +  
Sbjct: 5   WQPTASIDQ---LRQRATLVASIRQFFADRQVMEVDTPAMSHATVTDIHLHTFQTEFVGP 61

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +     L+  TSPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    
Sbjct: 62  GYADGSKLFFMTSPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNPEFTMLEWYRVGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           + +LM +  ++++   +                    + +T  +AF     +        
Sbjct: 122 HHKLMDEMDDLLQLVLKCGAA----------------QRMTYQQAFIDVLGV-------C 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L   A + G+      ++    +   +    +E  +G +    +  +PA ++
Sbjct: 159 PLEGSMTELKAAASKLGLSDIAEPEEERDTLLQLLFSVGVENKIGQDVPAFVYDFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P D R   RFE+Y   IEL N   EL +P EQ  RFE++  ++ ++  +  PID
Sbjct: 219 ALAKINPQDHRVADRFEVYFKGIELANGFHELDNPKEQLARFEQDNAKRIEMGLKPQPID 278

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++ L   +P  +G+A+G DRL+ML  G ++I++V   PF
Sbjct: 279 YHLISALEAGLPDCAGVALGIDRLIMLALGCDHIDQVTAFPF 320


>gi|210075817|ref|XP_503198.2| YALI0D23639p [Yarrowia lipolytica]
 gi|199425847|emb|CAG81398.2| YALI0D23639p [Yarrowia lipolytica]
          Length = 542

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 78/370 (21%), Positives = 143/370 (38%), Gaps = 30/370 (8%)

Query: 1   MHQIPSQPWWNRDFHY-----------RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +H +PS    +                  R  +  R  + + +R +F +  F+E+++  L
Sbjct: 171 LHPLPSNQSGDVHKRLANRVVDFSTSPESREMIYARATVIAYVRRFFSDRGFLEVETPIL 230

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKP-----------LYLQTSPEFSCKKLLAAGEEKIF 98
               G  +  R F+TE       +K            + L+ +PE   K+L+ +G +K+F
Sbjct: 231 SDVAGGAS-ARPFTTESNHLTRTKKKSKSDCKEITTQIALRVAPELWLKRLVISGFDKVF 289

Query: 99  CFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN 158
               ++RN      H PEFT  E+Y  +   + L                 K  S+    
Sbjct: 290 EVGPSFRNESIDSTHNPEFTTCEFYWGYAELKDLTDTLEEFFIGLLTTVITKHPSYSERL 349

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
                E +       F +    D        D  D   L    +  G+++    + + ++
Sbjct: 350 TPWLEEFKKGIKHVDFLK-TIADKSGHELPRDLTDVDGLVSMYKSLGLKLPSVLSPAKLW 408

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD-PRFTKRFELYACNIELCNACDE 277
             +  E +E         ++   P   S LA  +  D    +KRFEL+   +E  N  +E
Sbjct: 409 DELAAEYVEK---SGRVLLITNQPELMSPLAKSWTRDGYALSKRFELFIGGMEYANGYEE 465

Query: 278 LLDPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
              P  Q  +F  + Q + +   +E +  D  ++  +   +P ++G  +G DRLVM +TG
Sbjct: 466 ENSPFAQMDKFVSQQQSRDEHADDEAHVQDSGYVTDMEWGLPPTAGCGIGIDRLVMFITG 525

Query: 336 ANNINEVIWT 345
           A +I +VI  
Sbjct: 526 AKSIQQVIPF 535


>gi|28899612|ref|NP_799217.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838013|ref|ZP_01990680.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio
           parahaemolyticus AQ3810]
 gi|260361270|ref|ZP_05774378.1| lysine--tRNA ligase-like protein GenX [Vibrio parahaemolyticus
           K5030]
 gi|260876646|ref|ZP_05889001.1| lysyl-tRNA synthetase-like protein GenX [Vibrio parahaemolyticus
           AN-5034]
 gi|260898086|ref|ZP_05906582.1| lysine--tRNA ligase family protein GenX [Vibrio parahaemolyticus
           Peru-466]
 gi|260902325|ref|ZP_05910720.1| lysine--tRNA ligase-like protein GenX [Vibrio parahaemolyticus
           AQ4037]
 gi|33301719|sp|Q87KY6|SYK3_VIBPA RecName: Full=Uncharacterized protein YjeA
 gi|28807864|dbj|BAC61101.1| lysyl-tRNA synthetase-related protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748621|gb|EDM59480.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio
           parahaemolyticus AQ3810]
 gi|308085815|gb|EFO35510.1| lysine--tRNA ligase family protein GenX [Vibrio parahaemolyticus
           Peru-466]
 gi|308094021|gb|EFO43716.1| lysyl-tRNA synthetase-like protein GenX [Vibrio parahaemolyticus
           AN-5034]
 gi|308110944|gb|EFO48484.1| lysine--tRNA ligase-like protein GenX [Vibrio parahaemolyticus
           AQ4037]
 gi|308114249|gb|EFO51789.1| lysine--tRNA ligase-like protein GenX [Vibrio parahaemolyticus
           K5030]
 gi|328472261|gb|EGF43131.1| poxB regulator PoxA [Vibrio parahaemolyticus 10329]
          Length = 323

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 96/342 (28%), Positives = 165/342 (48%), Gaps = 30/342 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L +R  + +++R++F E Q +E+D+ ++ ++   + H+  F TE +  
Sbjct: 5   WQPTASIEQ---LRQRATLIAAIRQFFAERQVMEVDTPAMSHATVTDIHLHTFQTEFVGP 61

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +     L+  TSPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    
Sbjct: 62  GYADGSKLFFMTSPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNPEFTMLEWYRVGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           + +LM +  ++++   +                    + +T  +AF     +        
Sbjct: 122 HHKLMDEMDDLLQLVLKCGAA----------------QRMTYQQAFIDVLGV-------C 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L   A + G+      ++    +   +    +E  +G +    +  +PA ++
Sbjct: 159 PLEGSMTELKAAASKLGLSDIAEPEEDRDTLLQLLFSVGVENKIGQDVPAFVYDFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P D R   RFE+Y   IEL N   EL +P EQ  RFE++  ++ ++  +  PID
Sbjct: 219 ALAKINPQDHRVADRFEVYFKGIELANGFHELDNPKEQLARFEQDNAKRIEMGLKPQPID 278

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++ L   +P  +G+A+G DRL+ML  G ++I++V   PF
Sbjct: 279 YHLISALEAGLPDCAGVALGIDRLIMLALGCDHIDQVTAFPF 320


>gi|297581493|ref|ZP_06943416.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534331|gb|EFH73169.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 324

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 164/333 (49%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   + +   L+L T
Sbjct: 15  LKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSALHLMT 74

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 75  SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 134

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P + +   L   
Sbjct: 135 QLVLRCGSA----------------ERMTYQEAFLNVLGV-------CPLEGEMRELKQV 171

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I PADPR 
Sbjct: 172 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPADPRV 231

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 232 AERFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 292 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 324


>gi|86147217|ref|ZP_01065532.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834932|gb|EAQ53075.1| lysyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 323

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 97/343 (28%), Positives = 157/343 (45%), Gaps = 26/343 (7%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W      ++   L +R  I + +R++FVE   +E+D+ ++ ++   + H+  F TE +  
Sbjct: 5   WQPAATIKQ---LKQRADILNQIRQFFVERNVMEVDTPAMSHATVTDVHLHTFKTEFVGP 61

Query: 70  DHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +   +PL+  TSPEF  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR    
Sbjct: 62  GYAHGQPLFFMTSPEFHMKRLLAAGSGCIYQICKSFRNEENGRYHNPEFTMLEWYRVGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM +   +++   +    +  ++Q                      A ID+      
Sbjct: 122 HHDLMDEMDLLLQQVLKSGIAERMTYQQ---------------------AFIDVLGVCPL 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
            D  D                 +     +   +    +E  +G      +  +PA ++AL
Sbjct: 161 EDSMDTLKQAAAKLGLSDIADPEQDRDTLLQLLFSIGVEAKIGQQVPAFVYDFPASQAAL 220

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I P D R   RFE+Y   IEL N   EL  P EQ  RFE +  ++ ++     PID  
Sbjct: 221 AKINPNDSRVADRFEVYFKGIELANGFHELDKPQEQLKRFEDDNAKRIEMGLSPQPIDHH 280

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +  L   +P  +G+A+G DRL+ML  G ++I++V   PF +S
Sbjct: 281 LIEALKAGLPDCAGVALGIDRLIMLALGYDHIDDVTAFPFPRS 323


>gi|229507296|ref|ZP_04396801.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae BX 330286]
 gi|229509780|ref|ZP_04399261.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae B33]
 gi|229516905|ref|ZP_04406351.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae RC9]
 gi|229606802|ref|YP_002877450.1| lysyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|255744383|ref|ZP_05418335.1| lysyl-tRNA synthetase-related protein [Vibrio cholera CIRS 101]
 gi|262158507|ref|ZP_06029622.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae INDRE 91/1]
 gi|262170099|ref|ZP_06037788.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae RC27]
 gi|25009412|sp|Q9KNS6|SYK3_VIBCH RecName: Full=Uncharacterized protein YjeA
 gi|229345968|gb|EEO10940.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae RC9]
 gi|229353254|gb|EEO18193.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae B33]
 gi|229354801|gb|EEO19722.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae BX 330286]
 gi|229369457|gb|ACQ59880.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MJ-1236]
 gi|255737908|gb|EET93301.1| lysyl-tRNA synthetase-related protein [Vibrio cholera CIRS 101]
 gi|262021507|gb|EEY40219.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae RC27]
 gi|262029668|gb|EEY48317.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae INDRE 91/1]
          Length = 324

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 163/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   + +   L+L T
Sbjct: 15  LKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSALHLMT 74

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 75  SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 134

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P + +   L   
Sbjct: 135 QLVLRCGSA----------------ERMTYQEAFLNVLGV-------CPLEEEMRELKQV 171

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I PADPR 
Sbjct: 172 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPADPRV 231

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 232 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 292 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 324


>gi|167948503|ref|ZP_02535577.1| Lysyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 274

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 9/280 (3%)

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
             L+L+ +PE   K+L+  G E+++     +RN      H PEFTMLE+Y A+  Y  LM
Sbjct: 1   MELFLRIAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNPEFTMLEFYEAYTDYHGLM 60

Query: 134 KDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
               +++R    EV      ++Q  + +  S    +TV ++   +        +   +  
Sbjct: 61  DLTEDMLRHLCEEVLGSTSVTYQGESYDFDSPFRRMTVKDSILHF-----NDDISAEELD 115

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           D       A++  I +        +   I  + +E    +   T +  YP   S LA   
Sbjct: 116 DLDRARAIAERLEIPLKASYGLGKVQIEIFEKTVEHQ--LMDPTFITAYPTEVSPLARRN 173

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             DP  T RFE +    E+ N   EL D  +Q  RF K+++EK    +E    DED++  
Sbjct: 174 DDDPFVTDRFEFFVGGREIANGFSELNDAEDQAERFRKQVEEKDAGDDEAMHFDEDYVRA 233

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           L   MP ++G  +G DRLVML+T + +I +V+  P  +  
Sbjct: 234 LEHGMPPTAGEGIGIDRLVMLLTDSPSIRDVLLFPHMRPE 273


>gi|115372716|ref|ZP_01460022.1| truncated lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115370197|gb|EAU69126.1| truncated lysyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 846

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 112/325 (34%), Positives = 172/325 (52%), Gaps = 10/325 (3%)

Query: 25  RNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK--PLYLQTSP 82
           R M+ ++LR +F+   ++E+++  L  +PG E HI AF    + +  + +  PLYL TSP
Sbjct: 524 RQMLYAALRRFFMGQGYLEVETPLLIPTPGMEPHITAFEVPFVPETDVGQARPLYLHTSP 583

Query: 83  EFSCKKLLA-AGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           E++ K++LA      +F     +RNGE    H PEFTMLE+YR H  Y  +M D    + 
Sbjct: 584 EYAMKRMLADGAHGPLFQICKVFRNGEVSVTHNPEFTMLEFYRPHVDYHAIMADLEQALA 643

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
             A  +        + +       E +TV +A  R   +DL    D P       L   A
Sbjct: 644 E-AGRSAAPGEPGADPSFFTRLPYERLTVRDAVLRATGVDLRACPDGPS------LKRAA 696

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           + AG+R      + D+F  + ++K+E  LG    T L  YPA  ++L+ + P DP   +R
Sbjct: 697 EAAGVRTGEATGFDDVFFHLFLQKVERGLGHERPTFLIEYPASMASLSRLKPGDPSVAER 756

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSG 321
            ELYA  +EL N   EL D +EQR RF +E   ++ +    YP+DE FL  +  MP ++G
Sbjct: 757 VELYAKGLELANGFSELTDAVEQRARFVEEQALRRALGRTVYPLDERFLEAVGRMPPAAG 816

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA+G DR++ML+ GA +I +V+  P
Sbjct: 817 IAVGLDRILMLLMGAGSITDVLLFP 841


>gi|153825094|ref|ZP_01977761.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MZO-2]
 gi|149741240|gb|EDM55282.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae MZO-2]
          Length = 349

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 163/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   + +   L+L T
Sbjct: 40  LKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSALHLMT 99

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 100 SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 159

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P + +   L   
Sbjct: 160 QLVLRCGSA----------------ERMTYQEAFLNVLGV-------CPLEGEMRELKQV 196

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I PADPR 
Sbjct: 197 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPADPRV 256

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 257 ADRFEVYFKGIELANGFHELDNPAEQLVRFKADNAKRLEMGLTEQPIDYHLIAALEAGLP 316

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 317 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 349


>gi|218708311|ref|YP_002415932.1| lysyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782467|sp|B7VHR8|SYK3_VIBSL RecName: Full=Uncharacterized protein YjeA
 gi|218321330|emb|CAV17280.1| putative lysyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 323

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 97/343 (28%), Positives = 157/343 (45%), Gaps = 26/343 (7%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W      ++   L +R  I + +R++FVE   +E+D+ ++ ++   + H+  F TE +  
Sbjct: 5   WQPAATIKQ---LKQRADILNQIRQFFVERNVMEVDTPAMSHATVTDVHLHTFKTEFVGP 61

Query: 70  DHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +   +PL+  TSPEF  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR    
Sbjct: 62  GYAHGQPLFFMTSPEFHMKRLLAAGSGCIYQICKSFRNEENGRYHNPEFTMLEWYRVGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM +   +++   +    +  ++Q                      A ID+      
Sbjct: 122 HHDLMDEMDLLLQQVLKSGTAERMTYQQ---------------------AFIDVLGVCPL 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
            D  D                 +     +   +    +E  +G      +  +PA ++AL
Sbjct: 161 EDSMDTLKQAAAKLGLSDIADPEQDRDTLLQLLFSIGVEAKIGQQVPAFVYDFPASQAAL 220

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I P D R   RFE+Y   IEL N   EL  P EQ  RFE +  ++ ++     PID  
Sbjct: 221 AKINPNDSRVADRFEVYFKGIELANGFHELDKPQEQLKRFEDDNTKRIEMGLSPQPIDHH 280

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +  L   +P  +G+A+G DRL+ML  G ++I++V   PF +S
Sbjct: 281 LIEALKAGLPDCAGVALGIDRLIMLALGYDHIDDVTAFPFPRS 323


>gi|19075887|ref|NP_588387.1| mitochondrial lysine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|74582575|sp|O74858|SYKM_SCHPO RecName: Full=Lysyl-tRNA synthetase, mitochondrial; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS; Flags: Precursor
 gi|3766370|emb|CAA21422.1| mitochondrial lysine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe]
          Length = 531

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 158/367 (43%), Gaps = 28/367 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +H IP +   N +  + +R             L KR  I  S+R++F E  F+E+++  L
Sbjct: 173 LHPIPVK-LTNYEKRFEKRFVDMMSNTKSLELLEKRYRIIESIRKFFSERGFLEVETPIL 231

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
            +  G  T  R F T     D  + PL L+ +PE   K+L+  G  ++F     +RN   
Sbjct: 232 SHHFGGAT-ARPFIT----SDIHKLPLTLRCAPELWLKQLVIGGMNRVFELGKNFRNEGI 286

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFT  E Y A+ + E + K    +IR      N           +     E I 
Sbjct: 287 DATHNPEFTSCEAYCAYLNLEGMKKLTEELIRFICLTING-NLQISGQTVDLEKGFEVIE 345

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
              A  +  N++L    ++ +   R  L    ++  I +    T + +  ++    +   
Sbjct: 346 FIPALQKELNVELSPLDNSENC--RKQLISIFKRCEIMLPKTCTVAHLLDKLFDSLVL-K 402

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKR-----FELYACNIELCNACDELLDPIEQ 284
              +    +  +P   S LA          ++     FELY    E+CNA +E  DP+ Q
Sbjct: 403 YNTSSPKFVINHPEVMSPLAKSDIKLYGAVEQRISKRFELYIGGYEICNAYEEENDPVAQ 462

Query: 285 RHRFEKEMQEK-KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
            H+F+ +  ++ +   +ET   D DF+  L   +P ++G  MG DRLVML+TG + I+E+
Sbjct: 463 YHKFQAQKYDRLQLGDDETPAPDSDFVHALEYGLPPTAGWGMGVDRLVMLMTGQSKISEI 522

Query: 343 IWTPFSQ 349
           +     +
Sbjct: 523 LPFGSLR 529


>gi|269103619|ref|ZP_06156316.1| lysyl-tRNA synthetase-related protein [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163517|gb|EEZ42013.1| lysyl-tRNA synthetase-related protein [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 323

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 94/333 (28%), Positives = 156/333 (46%), Gaps = 27/333 (8%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD-HIRKPLYL 78
             L +R  + +++R++F +   +E+D+ ++  +   + H+  F TE +       + LYL
Sbjct: 12  AMLKQRAKLIAAIRQFFYQRDVLEVDTPAMSQATVTDIHLHTFKTEFVGPGFADGQILYL 71

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            TSPEF  K+LL+AG   I+    ++RN E G  H PEFTMLEWYR    + QLM +   
Sbjct: 72  MTSPEFHMKRLLSAGSGAIYQICKSFRNEESGRYHNPEFTMLEWYRPGFDHHQLMDEMDE 131

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++                      + E ++  +AF     +        P +     L 
Sbjct: 132 LLQLILGC----------------QQAERMSYQQAFLNVLGV-------CPLEGSMLELK 168

Query: 199 LQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
             A + G+      ++    +   +    IE  +G      +  +PA ++ALA I P D 
Sbjct: 169 QAAAKLGLSDIAEPEEDRDTLLQLLFSIGIEGKIGQKVPAFVYDFPASQAALAQINPTDN 228

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
           R  +RFE+Y   IEL N   EL +  EQ  RFE +  ++ ++  E  PID + +  L   
Sbjct: 229 RVAERFEVYFKGIELANGFHELANGDEQLIRFEADNHKRIEMGLEPQPIDMNLVNALRAG 288

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P  +G+A+G DRL+ML  G  +I++V   P  
Sbjct: 289 FPDCAGVALGIDRLIMLALGLKHIDQVTAFPVD 321


>gi|242802788|ref|XP_002484043.1| lysyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218717388|gb|EED16809.1| lysyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 510

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 83/340 (24%), Positives = 142/340 (41%), Gaps = 21/340 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R+ I   +R++FVE  F+E+++  +    G  T  R F T         K LYL+
Sbjct: 182 DIMRIRSAIIQYIRQFFVERTFMEVNTPIMASEAGGAT-ARPFVTTANEF--PDKSLYLR 238

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +K+F    ++RN      H PEFT  E+Y  + + E ++    N+
Sbjct: 239 IAPELWLKRLVIGGFDKVFEIGPSFRNEGIDKSHNPEFTTCEFYMVYANLEDVISITENL 298

Query: 140 IRCAAEVANQKIFSF----QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP--- 192
               AE  +Q+           + N       I         + I+       PD     
Sbjct: 299 FSGLAEHVSQQKERMSSEIPTPSTNFSIPFRRIDF------ISGIEAAINRPLPDLSSPS 352

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
               +    ++  I +    T   +  ++    +EP    +  T +   P   S L+  +
Sbjct: 353 AEQDVKKLFKELSIPLPDLPTLPRLMDKLCSTYLEPQC--DEPTFIIHPPECLSPLSKSF 410

Query: 253 -PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              + R   R EL+    E  NA +E   P EQR +FE++ +   +  NE+  +DE +L 
Sbjct: 411 IQNNQRVAARCELFIQGREYVNAYEEENSPWEQRRKFEQQ-KIFNQHTNESTGVDESYLQ 469

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +   +P + G   G DRLVML T +  I +V+     +S
Sbjct: 470 AMEWGLPPTGGWGCGIDRLVMLFTDSKRIGDVLPFRTLRS 509


>gi|229513575|ref|ZP_04403039.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae TMA 21]
 gi|229349452|gb|EEO14408.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae TMA 21]
 gi|327485129|gb|AEA79536.1| Lysyl-tRNA synthetase-like protein [Vibrio cholerae LMA3894-4]
          Length = 324

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 163/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   + +   L+L T
Sbjct: 15  LKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSALHLMT 74

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 75  SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 134

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P + +   L   
Sbjct: 135 QLVLRCGSA----------------ERMTYQEAFLNVLGV-------CPLEGEMRELKQV 171

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I PADPR 
Sbjct: 172 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPADPRV 231

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 232 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 292 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 324


>gi|262170412|ref|ZP_06038090.1| lysyl-tRNA synthetase-related protein [Vibrio mimicus MB-451]
 gi|261891488|gb|EEY37474.1| lysyl-tRNA synthetase-related protein [Vibrio mimicus MB-451]
          Length = 318

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 100/333 (30%), Positives = 161/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI-RKPLYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   +     L+L T
Sbjct: 9   LKQRATLLRQIREFFAERDVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSSLHLMT 68

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEF MLEWYR    +  LM +   ++
Sbjct: 69  SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFAMLEWYRIGFDHHALMDEMDALL 128

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P + D   L   
Sbjct: 129 QLVLRSGSA----------------ERMTYQEAFLNVLGV-------CPLEGDMSELKQV 165

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G +    +  +PA ++ALA I PAD R 
Sbjct: 166 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQSVPAFVYDFPASQAALAKINPADSRV 225

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 226 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLAEQPIDYHLIAALEAGLP 285

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 286 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 318


>gi|1573850|gb|AAC22494.1| lysyl-tRNA synthetase analog (genX) [Haemophilus influenzae Rd
           KW20]
          Length = 333

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 107/339 (31%), Positives = 161/339 (47%), Gaps = 28/339 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W      +     LKR  I + +R++F E   +E+++  L      + H+  FSTE + 
Sbjct: 16  HWQPSADIKNH---LKRAKIIAKIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLA 72

Query: 69  Q-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                 K L+L TSPE+  K+LLAAG   IF  +  +RN E G  H PEFTMLEWYR H 
Sbjct: 73  PFGEQSKTLWLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNPEFTMLEWYRPHF 132

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
              +L+ +  ++++                        E ++    F  Y  +D      
Sbjct: 133 HMHRLINEVDDLLQ----------------QILDCPPAESLSYQFVFQEYVGLD------ 170

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
            P   +R  L   A++       ++    +   +  E +EP +G      +  +P+ ++A
Sbjct: 171 -PLSAERSELIEAARKHNFMAEDNEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPSTQAA 229

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA + P D R  +RFE Y   +EL N   EL D  EQRHRFE + Q+++K    T  IDE
Sbjct: 230 LAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTREIDE 289

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FLA L   MP +SG+A+G DRL+M+      IN+VI  
Sbjct: 290 RFLAALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 328


>gi|229524631|ref|ZP_04414036.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae bv. albensis
           VL426]
 gi|229338212|gb|EEO03229.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae bv. albensis
           VL426]
          Length = 324

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 163/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   + +   L+L T
Sbjct: 15  LKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPSYAKGSALHLMT 74

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 75  SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 134

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P + +   L   
Sbjct: 135 QLVLRCGSA----------------ERMTYQEAFLNVLGV-------CPLEGEMCELKQV 171

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I PADPR 
Sbjct: 172 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPADPRV 231

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 232 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 292 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 324


>gi|323940077|gb|EGB36271.1| tRNA synthetase class II [Escherichia coli E482]
          Length = 303

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 98/326 (30%), Positives = 157/326 (48%), Gaps = 27/326 (8%)

Query: 29  QSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH-IRKPLYLQTSPEFSCK 87
            + +R +F +   +E+++  +  +   + H+  F T  +   H     L+L TSPE+  K
Sbjct: 1   MAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMK 60

Query: 88  KLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
           +LL AG   +F    ++RN E G  H PEFTMLEWYR H    +LM +  ++++   +  
Sbjct: 61  RLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDC- 119

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
                             E ++  +AF RY  ID       P   D+  L   A +  + 
Sbjct: 120 ---------------PAAESLSYQQAFLRYLEID-------PLSADKTQLREVAAKLDLS 157

Query: 208 VAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
              D  +    +   +    +EPN+G    T +  +PA +++LA I   D R  +RFE+Y
Sbjct: 158 NVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQASLAQISTEDHRVAERFEVY 217

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
              IEL N   EL D  EQ+ RFE++ +++       +PID++ +  L   MP  SG+A+
Sbjct: 218 YKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVAL 277

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQS 350
           G DRLVML  GA  + EVI     ++
Sbjct: 278 GVDRLVMLALGAETLAEVIAFSVDRA 303


>gi|229521718|ref|ZP_04411136.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae TM 11079-80]
 gi|229341312|gb|EEO06316.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae TM 11079-80]
          Length = 324

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 99/333 (29%), Positives = 161/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   + +   L+L T
Sbjct: 15  LKQRATLLRQIREFFAERNVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSALHLMT 74

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 75  SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 134

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                   +T  EAF     +        P + +   L   
Sbjct: 135 QLVLRCGSAG----------------RMTYQEAFLNVLGV-------CPLEGEMRELKQV 171

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I P DPR 
Sbjct: 172 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPVDPRV 231

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 232 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 292 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 324


>gi|258541374|ref|YP_003186807.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632452|dbj|BAH98427.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635509|dbj|BAI01478.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256638564|dbj|BAI04526.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256641618|dbj|BAI07573.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256644673|dbj|BAI10621.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256647728|dbj|BAI13669.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256650781|dbj|BAI16715.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256653772|dbj|BAI19699.1| lysyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 341

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 129/342 (37%), Positives = 183/342 (53%), Gaps = 14/342 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFST 64
           P     + D    R PFLL+RN++    R +      +E+++     +PG E H++ F T
Sbjct: 9   PDPGMKDPDHILDRLPFLLRRNLVLRGARAFLEARGCVEVETPYAVPTPGEEVHLQPFHT 68

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                D +++ L+L TSPEF+ K+++AA    +F FA  WRNGE   LH PEFTMLEWY+
Sbjct: 69  VQEAPDGVQQNLFLHTSPEFAMKRIVAATGLPVFQFARVWRNGEGSDLHAPEFTMLEWYQ 128

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
            + + E LM +   +++                + N     E +T+ EAF R+A +D   
Sbjct: 129 PNMTLEGLMDETEALLQAVLPPI----LHHSGHSLNISGPFERLTMQEAFHRHAGVD--- 181

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                  P        A  AG  +   +TW D+F R+L+E+IEP +G    T L  +PA 
Sbjct: 182 -----LLPTEGNAQALANAAGCTLREGETWEDLFFRLLMERIEPAIGRTRPTFLTHWPAS 236

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN--ET 302
           ++ALA   P DPR   RFELYA  +EL NA +EL D  EQR RFE +  ++K +Y     
Sbjct: 237 QAALARKSPQDPRVALRFELYAAGMELANAFEELTDATEQRLRFEADRHQRKTLYPNRPD 296

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +P+DE  L+ L  MP  SGIA+GFDRLVML  G   I  V+W
Sbjct: 297 WPVDEKLLSALPHMPTCSGIALGFDRLVMLACGTTRIQNVLW 338


>gi|89075323|ref|ZP_01161745.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048872|gb|EAR54441.1| lysyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 322

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 93/343 (27%), Positives = 159/343 (46%), Gaps = 26/343 (7%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L KR  + + +R++F     +E+D+ ++  +   + H+  F TE +  
Sbjct: 4   WQPTASIEQ---LKKRAHLLAVIRQFFAARDVMEVDTPAMSQATVTDVHLHTFQTEFVGP 60

Query: 70  DHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +   + L+L TSPEF  K+LL+AG   I+    ++RN E G  H PEFTMLEWYR +  
Sbjct: 61  GYADGQTLFLMTSPEFHMKRLLSAGSGAIYQICKSFRNEESGRYHNPEFTMLEWYRPNFD 120

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM +  ++++        +  ++Q    N                   +   T    
Sbjct: 121 HHLLMNEMNDLLQLVLGCGAAEKTTYQQAFINQ----------------LGVCPLTGTMM 164

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
             +     L L           +D    +   +    +E  +G +    +  +PA ++AL
Sbjct: 165 ELKAAAATLGLSDIA-----EPEDDRDTLLQLLFSIGVEGKIGQHVPAFVYDFPASQAAL 219

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I P DPR  +RFE+Y   IEL N   EL +  EQ  RFE++ Q++ ++  +  PID +
Sbjct: 220 AQINPTDPRVAERFEVYFKGIELANGFHELANGDEQLQRFEQDNQKRLEMGLKLQPIDMN 279

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +  L    P  +G+A+G DRL+ML  G ++I +V   P  ++
Sbjct: 280 LVNALRAGFPDCAGVALGIDRLIMLALGLDHIEKVTAFPIDRA 322


>gi|229527420|ref|ZP_04416812.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 12129(1)]
 gi|229335052|gb|EEO00537.1| lysyl-tRNA synthetase-related protein [Vibrio cholerae 12129(1)]
          Length = 324

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 163/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   + +   L+L T
Sbjct: 15  LKQRATLLRQIREFFAERNVLEVETPAISHATVTDIHLHTFKTEFVGPGYAKGSALHLMT 74

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 75  SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 134

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P + +   L   
Sbjct: 135 QLVLRCGSA----------------ERMTYQEAFLNVLGV-------CPLEGEMRELKQV 171

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I PADPR 
Sbjct: 172 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQITPAFVYDFPASQAALAKINPADPRV 231

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 232 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLTEQPIDYHLIAALEAGLP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 292 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 324


>gi|269962499|ref|ZP_06176848.1| Lysyl-tRNA synthetase-related protein [Vibrio harveyi 1DA3]
 gi|269832795|gb|EEZ86905.1| Lysyl-tRNA synthetase-related protein [Vibrio harveyi 1DA3]
          Length = 323

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 97/342 (28%), Positives = 163/342 (47%), Gaps = 30/342 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L +R  + +++R++F E Q +E+D+ ++ ++   + H+  F TE +  
Sbjct: 5   WQPTASMEQ---LRQRAALITAIRQFFAERQVMEVDTPAMSHATVTDIHLHTFQTEFVGP 61

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +     L+  TSPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    
Sbjct: 62  GYADGSKLFFMTSPEFHMKRLLAAGSGCIYQINKAFRNEENGRHHNPEFTMLEWYRIGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           + +LM +  ++++   +                    E +T  +AF     +        
Sbjct: 122 HHKLMDEMDDLLQLVLKCGAA----------------ERMTYQQAFIDVLGV-------C 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L   A + G+      ++    +   +    +E  +G      +  +PA ++
Sbjct: 159 PLEGSMQELKAVAAKLGLSDIAEPEEDRDTLLQLLFSIGVEAKIGQQVPAFVYDFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P D R   RFE+Y   IEL N   EL +P EQ  RFE++  ++ ++  +  PID
Sbjct: 219 ALAKINPQDNRVADRFEVYFKGIELANGFHELDNPKEQLARFEQDNAKRLEMGLKPQPID 278

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +  L   +P  +G+A+G DRL+ML  G ++I++V   PF
Sbjct: 279 YHLIGALEAGLPDCAGVALGVDRLIMLALGCDHIDQVTAFPF 320


>gi|261211221|ref|ZP_05925510.1| lysyl-tRNA synthetase-related protein [Vibrio sp. RC341]
 gi|260839722|gb|EEX66333.1| lysyl-tRNA synthetase-related protein [Vibrio sp. RC341]
          Length = 349

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 100/333 (30%), Positives = 160/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD-HIRKPLYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +       + L+L T
Sbjct: 40  LKQRATLLRQIREFFAERDVLEVETPAMSHATVTDIHLHTFQTEFVGPGYAQGRSLHLMT 99

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 100 SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 159

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +                        E +T  EAF     +        P + +   L   
Sbjct: 160 QLVLRCGCA----------------ERMTYQEAFLNVLGV-------CPLEGEMRELKQV 196

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      ++    +   +    IEP +G      +  +PA ++ALA I PADPR 
Sbjct: 197 AATLGLSDIAEPEEDRDTLLQLLFSIGIEPKIGQVTPAFVYDFPASQAALAKINPADPRV 256

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 257 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLAEQPIDYHLIAALEAGLP 316

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML    ++I++V   PF ++
Sbjct: 317 ECAGVALGIDRLIMLALDEDHIDKVTAFPFPRA 349


>gi|258625686|ref|ZP_05720565.1| Lysyl-tRNA synthetase-related protein [Vibrio mimicus VM603]
 gi|258581924|gb|EEW06794.1| Lysyl-tRNA synthetase-related protein [Vibrio mimicus VM603]
          Length = 324

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 99/331 (29%), Positives = 159/331 (48%), Gaps = 23/331 (6%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI-RKPLYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   +     L+L T
Sbjct: 15  LKQRATLLRQIREFFAERDVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSSLHLMT 74

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 75  SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHALMDEMDALL 134

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +       +  +     L   
Sbjct: 135 QLVLRCGSA----------------ERMTYQEAFLNVLGVCPLEGDMSELKHVAATL--- 175

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
               G     ++    +   +    IEP +G      +  +PA ++ALA I PADPR   
Sbjct: 176 --GLGDIAEPEEDRDTLLQLLFSIGIEPKIGQAVPAFVYDFPASQAALAKINPADPRVAD 233

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
           RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P+ 
Sbjct: 234 RFEVYFKGIELANGFHELDNPAEQLARFKADNTKRLEMGLVEQPIDYHLIAALEAGLPEC 293

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 294 AGVALGIDRLIMLALGEDHIDKVTAFPFPRA 324


>gi|262166668|ref|ZP_06034405.1| lysyl-tRNA synthetase-related protein [Vibrio mimicus VM223]
 gi|262026384|gb|EEY45052.1| lysyl-tRNA synthetase-related protein [Vibrio mimicus VM223]
          Length = 324

 Score =  239 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 101/333 (30%), Positives = 162/333 (48%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI-RKPLYLQT 80
           L +R  +   +RE+F E   +E+++ ++ ++   + H+  F TE +   +     L+L T
Sbjct: 15  LKQRATLLRQIREFFAERDVLEVETPAMSHATVTDIHLHTFKTEFVGPGYAKGSSLHLMT 74

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 75  SPEFHMKRLLAAGSGCIYQLGKAFRNEENGRYHNPEFTMLEWYRIGFDHHTLMDEMDALL 134

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  EAF     +        P +     L   
Sbjct: 135 QLVLRCGSA----------------ERMTYQEAFLNVLGV-------CPLEGGMSELKQV 171

Query: 201 AQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+    +  +    +   +    IEP +G +    +  +PA ++ALA I PADPR 
Sbjct: 172 AATLGLSDIAELEEDRDTLLQLLFSIGIEPKIGQSVPAFVYDFPASQAALAKINPADPRV 231

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RF+ +  ++ ++     PID   +A L   +P
Sbjct: 232 ADRFEVYFKGIELANGFHELDNPAEQLARFKADNAKRLEMGLLEQPIDYHLIAALEAGLP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 292 ECAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 324


>gi|161350024|ref|NP_438996.2| lysyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|1174524|sp|P43826|YJEA_HAEIN RecName: Full=Uncharacterized protein YjeA
          Length = 323

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 107/339 (31%), Positives = 161/339 (47%), Gaps = 28/339 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W      +     LKR  I + +R++F E   +E+++  L      + H+  FSTE + 
Sbjct: 6   HWQPSADIKNH---LKRAKIIAKIRQFFTERGLLEVETPVLSEFGVTDLHLSTFSTEFLA 62

Query: 69  Q-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                 K L+L TSPE+  K+LLAAG   IF  +  +RN E G  H PEFTMLEWYR H 
Sbjct: 63  PFGEQSKTLWLSTSPEYHMKRLLAAGSGPIFQISKVFRNEEAGNRHNPEFTMLEWYRPHF 122

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
              +L+ +  ++++                        E ++    F  Y  +D      
Sbjct: 123 HMHRLINEVDDLLQ----------------QILDCPPAESLSYQFVFQEYVGLD------ 160

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
            P   +R  L   A++       ++    +   +  E +EP +G      +  +P+ ++A
Sbjct: 161 -PLSAERSELIEAARKHNFMAEDNEDRDTLLQFLFSEVVEPQIGKERPIAVYHFPSTQAA 219

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA + P D R  +RFE Y   +EL N   EL D  EQRHRFE + Q+++K    T  IDE
Sbjct: 220 LAQVSPEDQRVAERFEFYYKGLELANGFHELADAQEQRHRFELDNQQRQKCELPTREIDE 279

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FLA L   MP +SG+A+G DRL+M+      IN+VI  
Sbjct: 280 RFLAALEAGMPDASGVALGIDRLMMIALDCEKINDVISF 318


>gi|312882763|ref|ZP_07742497.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369547|gb|EFP97065.1| lysyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 323

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 96/343 (27%), Positives = 161/343 (46%), Gaps = 26/343 (7%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   + +R  +   +R++F +   +E+D+ ++ +S   + H+  F T  I  
Sbjct: 5   WRPSADISK---IRQRAQVLQKIRQFFCQRNVLEVDTPAMSHSTVTDIHLDTFETHFIGP 61

Query: 70  D-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                + L+  TSPEF  K+LLAAG   I+  + A+RN E G  H PEFT+LEWYR    
Sbjct: 62  GYASGRKLFFATSPEFHMKRLLAAGSGCIYQLSKAFRNEESGRFHNPEFTLLEWYRVGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           + +LM +  ++++   +       ++Q                      A ID       
Sbjct: 122 HHKLMDEMADLLQLILQCKTPSRMTYQT---------------------AFIDTLGVCPL 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
            D  D+                ++    +   +    +E  +G +    +  +PA ++AL
Sbjct: 161 SDPMDKLKSVAYDLGLEDIARDEEDRDTLLQLLFSIGVETKIGHSDPVFVYDFPASQAAL 220

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I   D R  +RFE+Y   IEL N   EL DP EQ  RFE++  ++     E+ PID  
Sbjct: 221 AKISQVDKRVAERFEVYFKGIELANGFHELEDPREQLQRFERDNLKRVARGEESQPIDRH 280

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +A L   +P  SG+A+G DRLVML T +++I++++  PFS++
Sbjct: 281 LIAALESGLPSCSGVALGVDRLVMLATASDHIDQILAFPFSRA 323


>gi|238486444|ref|XP_002374460.1| lysyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220699339|gb|EED55678.1| lysyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 552

 Score =  238 bits (608), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 75/337 (22%), Positives = 133/337 (39%), Gaps = 15/337 (4%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R+ I   LR++F++  F+E+++  +    G     R F T         + L L+
Sbjct: 221 DIIKARSAIIQYLRQFFLDRSFMEVNTPIVNSIAGGAI-ARPFYTSATEF--PDRQLSLR 277

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +++F    ++RN      H PEFT  E+Y A+ + E L+    ++
Sbjct: 278 IAPELWLKRLVVGGFDRVFEIGPSFRNEGIDKTHNPEFTTCEFYHAYANLEDLLSMTESL 337

Query: 140 IRCAAEVANQKIF--SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +   A+         + +    +  +    I                  D         +
Sbjct: 338 LSGMAQHIRDTNKDGTLKPTEVDFSTPFRRIDFLTGIEEKIG---RKLPDLTSPDAVAQV 394

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYP-A 254
               +   + +    T   +   +    +EP       T +   P   S    + I+P  
Sbjct: 395 KQLFKDLSLEIPEAPTLPRLLDELCSIYVEPECV--NPTFIINPPECLSPLSKSFIHPVT 452

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
             R   R EL+    E+ N  +E   P EQR +FE +++  K    E+  IDE +L  L 
Sbjct: 453 GQRVAARGELFIEGKEVVNTYEEENSPSEQRRKFEDQVRYSKDAD-ESSEIDESYLEALE 511

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +P + G   G DRL ML TGA  I +V+     ++
Sbjct: 512 WGLPATGGWGCGIDRLCMLFTGAKRIADVLPFGTLRA 548


>gi|239609302|gb|EEQ86289.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 577

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 87/369 (23%), Positives = 146/369 (39%), Gaps = 24/369 (6%)

Query: 1   MHQIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +H IP +        Y R             L  R+ I   +R +F++  F+E+++  L 
Sbjct: 209 LHDIPLRIKEQESSPYDRHVQLLSSPTAADILRARSSIIQYIRTFFLDKSFMEVETPILA 268

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
              G     R F T         +PL L+ +PE   K+L+  G +K+F    ++RN    
Sbjct: 269 SVAGGAV-ARPFETSATEF--PDRPLSLRIAPELWLKRLVVGGFDKVFEIGQSFRNEGLD 325

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC---AAEVANQKIFSFQNVNCNPFSEPEY 167
             H PEFT  E+Y A    E L+    +I           NQ + +      +  +    
Sbjct: 326 KTHNPEFTTCEFYHAFADLETLISLTESIFTGLSQHVHNLNQTLPTLSPTTASFAAPFSR 385

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +             L   +  P +    ++    +Q       + T   +  R+    +E
Sbjct: 386 LDFIPDLEAAMGHKLPDFVSTPTEEAAKIILDLFEQLHHPPPTNATLPRLLDRLSSIYLE 445

Query: 228 PNLGINCCTILDRYPAPESA--LANIYPADPR-FTKRFELYACNIELCNACDELLDPIEQ 284
           P       T +  +P   S    + I+PA+ +  T R EL+    E+ N  +E   P EQ
Sbjct: 446 PQC--KNPTFIINHPECLSPLSKSFIHPANGQVVTARAELFVDKREMVNMYEEENSPFEQ 503

Query: 285 RHRFEKEMQEKKKIYNETYP--IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           R +FE ++  + +   E     +DE ++  L   +P + G   G DRLVML TGA  I +
Sbjct: 504 RRKFEIQLGFQGQAVEEEGEGKMDESYVQALQWGLPPTGGWGCGVDRLVMLFTGAGRIGD 563

Query: 342 VIWTPFSQS 350
           V+     +S
Sbjct: 564 VLSFGNLRS 572


>gi|68071695|ref|XP_677761.1| lysine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56498000|emb|CAH95108.1| lysine--tRNA ligase, putative [Plasmodium berghei]
          Length = 598

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 88/408 (21%), Positives = 163/408 (39%), Gaps = 74/408 (18%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D  Y+ R               ++ R  I   +R + ++ +++E+D+ 
Sbjct: 206 LLPLPDKHKGMKDIEYKYRKRYLDFLTNSEQKEKIITRFNIIQEIRRFLLKKKYLEVDTP 265

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKK-LLAAGEEKIFCFAHAWRN 106
            LQ   G  +  + F T L     +   LYL+ +PE   KK +++   EKIF  +  +RN
Sbjct: 266 MLQLVAGGAS-AKPFETHLKS---LDLVLYLRIAPELFLKKLIISGISEKIFELSKCFRN 321

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                +H PEFTMLE Y+++ +Y+ +MK    +I+       +KI      +    ++ E
Sbjct: 322 EGLSTIHNPEFTMLEIYKSYANYKYMMKFTKKLIKN----VAKKISISSPYSFILQNKWE 377

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD---TWSDIFSRILI 223
             +  +    Y +I+                Y +A+   I    +     W  +   +  
Sbjct: 378 KKSFIKIIKEYTSINFLK-------LSFDQAYEKAKDLNITFDQEKSALNWGLVVEEVFK 430

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           +KIEP L  +   I    P+  S L+     + + ++RFE Y   +E+ N   E  + I 
Sbjct: 431 KKIEPFLPSHPIHI-YHLPSETSPLSKTLNKNKKLSERFETYIGKMEIANGYSEEANTII 489

Query: 284 QRHRFEKEMQEKKKIY----------------------------------------NETY 303
           Q  +F  +   K K                                          NE +
Sbjct: 490 QEKKFWLQRYLKNKNSNKQKSDFISNKDNHQNETNDENNPSKDIDIKKKYIFKHTKNENH 549

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            ID D++  L   +P + G+ +G DRL ML+T +++I  ++  P  + 
Sbjct: 550 EIDYDYITALAHGLPPTGGLGIGIDRLCMLLTNSSSIKNILPFPIIKP 597


>gi|260779586|ref|ZP_05888476.1| lysyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604395|gb|EEX30699.1| lysyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 323

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 98/345 (28%), Positives = 168/345 (48%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L +R  +   +R++F +   +E+D+ ++ ++   + H+  F T+ +  
Sbjct: 5   WQPTASIEQ---LKQRANLIRQVRQFFDDRDVLEVDTPAMSHATVTDIHLHTFQTDFVGP 61

Query: 70  DHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +   K LYL TSPEF  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR    
Sbjct: 62  GYAKGKKLYLMTSPEFHMKRLLAAGSGCIYQICKSFRNEENGRYHNPEFTMLEWYRIGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           + QLM +  ++++   +V                   E +T  +AF +  ++        
Sbjct: 122 HHQLMDEMDDLLQRLLKVGAA----------------ERMTYQQAFLQVLSV-------C 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L + A + G+      +     +   +    +EP +G +    +  +PA ++
Sbjct: 159 PLEASMDELKVTADKLGLSDIAQPEQDRDTLLQLLFSVGVEPEIGQHVPVFVYDFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I   D R   RFE+Y   IEL N   EL +  EQ  RFE +  +++++   T PID
Sbjct: 219 ALARINRQDSRVADRFEVYFKGIELANGFHELDNATEQLKRFESDNAKREQMGLNTQPID 278

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              +  L   +P+ +G+A+G DRLVML T  ++I+++   PF ++
Sbjct: 279 NHLIKALEAGLPKCAGVALGIDRLVMLATSNDHIDKITAFPFPRA 323


>gi|261867508|ref|YP_003255430.1| lysyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|293391385|ref|ZP_06635719.1| putative lysyl-tRNA synthetase-like protein GenX [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|261412840|gb|ACX82211.1| putative lysyl-tRNA synthetase-like protein GenX [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|290951919|gb|EFE02038.1| putative lysyl-tRNA synthetase-like protein GenX [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 323

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 100/338 (29%), Positives = 157/338 (46%), Gaps = 28/338 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W      +    LL R    + +R +F +   +E+++  L      + H+  FSTE I  
Sbjct: 7   WQPTASIKN---LLARAKFMAEIRRFFTDRGLLEVETPVLSEFGVTDVHLATFSTEFISP 63

Query: 70  -DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                K L+L TSPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H  
Sbjct: 64  FGEQSKKLWLSTSPEYHMKRLLAAGSGPIFQIGKVFRNEEAGNRHNPEFTMLEWYRPHFD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +L+ +  ++++                        E ++   AF +Y  +D       
Sbjct: 124 MYRLINEVDDLLQ----------------QILECPPAESMSYQFAFQQYVGLD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P   +   L  +A++  +  A ++    +   +    +E  +G     ++  +PA ++AL
Sbjct: 161 PLSAEHEELVEKAKKYQLMNAEEENRDTLLQFLFSAVVEAQIGQESPVVVYHFPASQAAL 220

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I   D R  +RFE Y   +EL N   EL D  EQ  RFE++  +++K+      ID  
Sbjct: 221 AQISSEDLRVAERFEFYYKGLELANGFHELSDAREQLRRFEQDNHQREKMGLPPQTIDTR 280

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            L+ L   +P  SG+A+G DRL+M+  GA +I EVI  
Sbjct: 281 LLSALQAGIPNCSGVALGVDRLLMIAMGAESIKEVISF 318


>gi|90581260|ref|ZP_01237057.1| lysyl-tRNA synthetase [Vibrio angustum S14]
 gi|90437499|gb|EAS62693.1| lysyl-tRNA synthetase [Vibrio angustum S14]
          Length = 322

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 95/343 (27%), Positives = 161/343 (46%), Gaps = 26/343 (7%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L KR  + + +R++F   + +E+D+ ++  +   + H+  F TE +  
Sbjct: 4   WQPTASIEQ---LKKRAHLLAVIRQFFAAREVMEVDTPAMSQATVTDVHLHTFQTEFVGP 60

Query: 70  DHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +   + L+L TSPEF  K+LL+AG   I+    ++RN E G  H PEFTMLEWYR +  
Sbjct: 61  GYADGQTLFLMTSPEFHMKRLLSAGSGAIYQICKSFRNEESGRYHNPEFTMLEWYRPNFD 120

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM +  ++++                        E +T  +AF     +   T    
Sbjct: 121 HHLLMDEMNDLLQLVLGCGAA----------------EKMTYQQAFINQLGVCPLTGTMT 164

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
             +     L L           +D    +   +    +E  +G +    +  +PA ++AL
Sbjct: 165 ELKVAAATLGLSDIA-----EPEDDRDTLLQLLFSIGVEGKIGQHVPAFVYDFPASQAAL 219

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I P DPR  +RFE+Y   IEL N   EL +  EQ  RFE++ Q++ ++  +  PID +
Sbjct: 220 AQINPTDPRVAERFEVYFKGIELANGFHELANGDEQLQRFEQDNQKRLEMGLKPQPIDMN 279

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +  L    P  +G+A+G DRL+ML  G ++I +V   P  ++
Sbjct: 280 LVNALRAGFPDCAGVALGIDRLIMLALGLDHIEKVTAFPIDRA 322


>gi|156972498|ref|YP_001443405.1| lysyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166229787|sp|A7MX66|SYK3_VIBHB RecName: Full=Uncharacterized protein YjeA
 gi|156524092|gb|ABU69178.1| hypothetical protein VIBHAR_00130 [Vibrio harveyi ATCC BAA-1116]
          Length = 323

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 97/342 (28%), Positives = 163/342 (47%), Gaps = 30/342 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L +R  + +++R++F E Q +E+D+ ++ ++   + H+  F TE +  
Sbjct: 5   WQPTASMEQ---LRQRAALITAIRQFFAERQVMEVDTPAMSHATVTDIHLHTFQTEFVGP 61

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +     L+  TSPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    
Sbjct: 62  GYADGSKLFFMTSPEFHMKRLLAAGSGCIYQINKAFRNEENGRHHNPEFTMLEWYRIGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           + +LM +  ++++   +                    E +T  +AF     +        
Sbjct: 122 HHKLMDEMDDLLQLVLKCGAA----------------ERMTYQQAFIDVLGV-------C 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L + A + G+      ++    +   +    +E  +G      +  +PA ++
Sbjct: 159 PLEGSMQELKVVAAKLGLSDIAEPEEDRDTLLQLLSSIGVEAKIGQQVPAFVYDFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P D R   RFE+Y   IEL N   EL +P EQ  RFE++  ++  +  +  PID
Sbjct: 219 ALAKINPQDIRVADRFEVYFKGIELANGFHELDNPKEQLARFEQDNAKRLDMGLKPQPID 278

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +  L   +P  +G+A+G DRL+ML  G ++I++V   PF
Sbjct: 279 YHLIGALEAGLPDCAGVALGVDRLIMLALGCDHIDQVTAFPF 320


>gi|152979437|ref|YP_001345066.1| lysyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704334|sp|A6VQ84|SYK3_ACTSZ RecName: Full=Uncharacterized protein YjeA
 gi|150841160|gb|ABR75131.1| lysyl-tRNA synthetase-related protein GenX [Actinobacillus
           succinogenes 130Z]
          Length = 323

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 100/338 (29%), Positives = 154/338 (45%), Gaps = 28/338 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W    +      L  R  I +++R +F +   +E+++  L      + H+  FSTE +  
Sbjct: 7   WQPTANV---ETLFARAKIINNIRRFFTDRGVLEVETPILSEFGVTDVHLSTFSTEFVAP 63

Query: 70  DHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                K L+L TSPE+  K+LLAAG   IF   H +RN E G  H PEFTMLEWYR H  
Sbjct: 64  QAERSKTLWLNTSPEYHMKRLLAAGTGAIFQLCHVFRNEEAGSRHNPEFTMLEWYRPHFD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +L+ +  ++++                        E ++   AF  +  +D       
Sbjct: 124 MYRLINEVDDLLQ----------------QILDCEPAESMSYQFAFQEFVGVD------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P   +R +L   A++       D+    +   +    +EP +G      +  +PA ++AL
Sbjct: 161 PLSAERPILVELARKYNFMCDLDEDRDTLLQFLFSTVVEPKIGQERPVAVYHFPATQAAL 220

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I   D R  +RFE Y   +EL N   EL D  EQ HRFE++  ++ K+      ID  
Sbjct: 221 AQISSEDHRVAERFEFYYKGLELANGFHELTDHREQLHRFEQDNVQRAKLALPQREIDRR 280

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            L  L   +P +SG+A+G DRLVM+      I EV+  
Sbjct: 281 LLGALQAGVPNTSGVALGVDRLVMIALDKKRIEEVMAF 318


>gi|317144247|ref|XP_001819993.2| lysyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 463

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 75/337 (22%), Positives = 133/337 (39%), Gaps = 15/337 (4%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R+ I   LR++F++  F+E+++  +    G     R F T         + L L+
Sbjct: 132 DIIKARSAIIQYLRQFFLDRSFMEVNTPIVNSIAGGAI-ARPFYTSATEF--PDRQLSLR 188

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +++F    ++RN      H PEFT  E+Y A+ + E L+    ++
Sbjct: 189 IAPELWLKRLVVGGFDRVFEIGPSFRNEGIDKTHNPEFTTCEFYHAYANLEDLLSMTESL 248

Query: 140 IRCAAEVANQKIF--SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +   A+         + +    +  +    I                  D         +
Sbjct: 249 LSGMAQHIRDTNKDGTLKPTEVDFSTPFRRIDFLTGIEEKIG---RKLPDLTSPDAVAQV 305

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYP-A 254
               +   + +    T   +   +    +EP       T +   P   S    + I+P  
Sbjct: 306 KQLFKDLSLEIPEAPTLPRLLDELCSIYVEPECV--NPTFIINPPECLSPLSKSFIHPVT 363

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
             R   R EL+    E+ N  +E   P EQR +FE +++  K    E+  IDE +L  L 
Sbjct: 364 GQRVAARGELFIEGKEVVNTYEEENSPSEQRRKFEDQVRYSKDAD-ESSEIDESYLEALE 422

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +P + G   G DRL ML TGA  I +V+     ++
Sbjct: 423 WGLPATGGWGCGIDRLCMLFTGAKRIADVLPFGTLRA 459


>gi|323494462|ref|ZP_08099568.1| poxB regulator PoxA [Vibrio brasiliensis LMG 20546]
 gi|323311285|gb|EGA64443.1| poxB regulator PoxA [Vibrio brasiliensis LMG 20546]
          Length = 323

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 98/342 (28%), Positives = 159/342 (46%), Gaps = 30/342 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L +R  + + +R +F E   +E+D+ ++ ++   + H+  F TE +  
Sbjct: 5   WQPTASIEQ---LRQRAYLINQIRNFFTERNVLEVDTPAMSHATVTDVHLHTFQTEFVGP 61

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +     L+  TSPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    
Sbjct: 62  GYADGSKLFFMTSPEFHMKRLLAAGSGCIYQINKAFRNEENGRHHNPEFTMLEWYRVDFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           + +LM +   +++   + A                  E +T  +AF     +        
Sbjct: 122 HHKLMDEMDELLQLVLKCAAA----------------ERMTYQQAFIDVLGV-------C 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L   A   G+      +     +   +    +E  +G      +  +PA ++
Sbjct: 159 PLEGSMAELKAVAATLGLSDIAEPEQDRDTLLQLLFSIGVEAKIGQTVPAFVYDFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I   DPR   RFE+Y   IEL N   EL +P EQ  RFE +  ++ ++  +  PID
Sbjct: 219 ALAKINQQDPRVADRFEVYFKGIELANGFHELDNPGEQLKRFESDNAKRLEMGLKPQPID 278

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +A L   +P+ +G+A+G DRL+ML  G ++I++V   PF
Sbjct: 279 YHLIAALESGLPECAGVALGIDRLIMLAIGCDHIDQVTAFPF 320


>gi|163802726|ref|ZP_02196616.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173433|gb|EDP58255.1| lysyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 323

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 99/342 (28%), Positives = 163/342 (47%), Gaps = 30/342 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L +R  + S++R++F E Q +E+D+ ++ ++   + H+  F TE +  
Sbjct: 5   WQPSASIEQ---LRQRAALISAIRQFFTERQVMEVDTPAMSHATVTDVHLHTFQTEFVGP 61

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +     L+  TSPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    
Sbjct: 62  GYADGSKLFFMTSPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNPEFTMLEWYRVGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           + QLM +  ++++   +                    E +T  +AF     +        
Sbjct: 122 HHQLMDEMDDLLQLILKCGAA----------------ERMTYQQAFIDVLGV-------C 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L   A + G+      ++    +   +    +E  +G +    +  +PA ++
Sbjct: 159 PLEGSMRELKAVAAKLGLSDIAEPEEDRDTMLQLLFSIGVEAKIGQHVPAFIFDFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P D R   RFE+Y   IEL N   EL +P EQ  RFE++  ++ ++  +  PID
Sbjct: 219 ALAKINPQDNRVADRFEVYFKGIELANGFHELDNPKEQLARFEQDNAKRLEVGLQPQPID 278

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +  L   +P  +G+A+G DRL+ML  G  +I++V   PF
Sbjct: 279 GHLIGALEAGLPDCAGVALGVDRLIMLALGCEHIDQVTAFPF 320


>gi|153834942|ref|ZP_01987609.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio harveyi HY01]
 gi|148868622|gb|EDL67708.1| putative lysyl-tRNA synthetase homolog GenX [Vibrio harveyi HY01]
          Length = 323

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 96/342 (28%), Positives = 163/342 (47%), Gaps = 30/342 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W       +   L +R  + +++R++F E Q +E+D+ ++ ++   + H+  F TE +  
Sbjct: 5   WQPTASMEQ---LRQRAALITAIRQFFAERQVMEVDTPAMSHATVTDIHLHTFQTEFVGP 61

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +     L+  TSPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    
Sbjct: 62  GYADGSKLFFMTSPEFHMKRLLAAGSGCIYQINKAFRNEENGRHHNPEFTMLEWYRIGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           + +LM +  ++++   +                    E +T  +AF     +        
Sbjct: 122 HHKLMDEMDDLLQLVLKCGAA----------------ERMTYQQAFIDVLGV-------C 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L + A + G+      ++    +   +    +E  +G      +  +PA ++
Sbjct: 159 PLEGSMQELKVVAAKLGLSDIAEPEEDRDTLLQLLFSIGVEAKIGQQVPAFVYDFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I   D R   RFE+Y   IEL N   EL +P EQ  RFE++  ++ ++  +  PID
Sbjct: 219 ALAKINLQDNRVADRFEVYFKGIELANGFHELDNPKEQLARFEQDNAKRLEMGLKPQPID 278

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +  L   +P  +G+A+G DRL+ML  G ++I++V   PF
Sbjct: 279 YHLIGALEAGLPDCAGVALGVDRLIMLALGCDHIDQVTAFPF 320


>gi|327354398|gb|EGE83255.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 582

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 82/340 (24%), Positives = 138/340 (40%), Gaps = 14/340 (4%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ I   +R +F++  F+E+++  L    G     R F T         +PL L+
Sbjct: 243 DILRARSSIIQYIRTFFLDKSFMEVETPILASVAGGAV-ARPFETSATEF--PDRPLSLR 299

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +K+F    ++RN      H PEFT  E+Y A    E L+    +I
Sbjct: 300 IAPELWLKRLVVGGFDKVFEIGQSFRNEGLDKTHNPEFTTCEFYHAFADLETLISLTESI 359

Query: 140 IRC---AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
                      NQ + +      +  +    +             L      P +    +
Sbjct: 360 FTGLSQHVHNLNQTLPTLSPTTASFAAPFSRLDFIPDLEAAMGHKLPDFASTPTEEAAKI 419

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPA 254
           +    +Q       + T   +  R+    +EP       T +  +P   S    + I+PA
Sbjct: 420 ILDLFEQLHHPPPTNATLPRLLDRLSSIYLEPQC--KNPTFIVNHPECLSPLSKSFIHPA 477

Query: 255 DPR-FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP--IDEDFLA 311
           + +  T R EL+    E+ N  +E   P EQR +FE ++  + +   E     +DE ++ 
Sbjct: 478 NGQVVTARAELFVDKREMVNMYEEENSPFEQRRKFEIQLGFQGQAVEEEGEGKMDESYVQ 537

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L   +P + G   G DRLVML TGA  I +V+     +S
Sbjct: 538 ALQWGLPPTGGWGCGVDRLVMLFTGAGRIGDVLSFGNLRS 577


>gi|120555692|ref|YP_960043.1| lysyl-tRNA synthetase-related protein GenX [Marinobacter aquaeolei
           VT8]
 gi|120325541|gb|ABM19856.1| lysyl-tRNA synthetase-related protein GenX [Marinobacter aquaeolei
           VT8]
          Length = 322

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 109/349 (31%), Positives = 160/349 (45%), Gaps = 29/349 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +P W        R  L  R  + + +R +F E + +E+++  L      + ++    
Sbjct: 1   MTDRPVWQPSA---SRAALESRAQLLAHVRGFFSERRVLEVETPVLGRHGVTDVNLDGIP 57

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           +E+          +LQTSPE+  K+LLAAG   IF  A  +RNGE+G  H PEF+MLEWY
Sbjct: 58  SEVDAGGVQGG--WLQTSPEYHMKRLLAAGSGSIFQIARVFRNGERGKRHNPEFSMLEWY 115

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           R     +QLM++  +++    E +                 P  ++  EA    A ID  
Sbjct: 116 RVGFDDQQLMREVSDLVCGWLECS----------------PPVTVSYREAMQSIAGIDPM 159

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           T        DR L     Q                  ++   +EP LG      + RYPA
Sbjct: 160 TI------TDRDLERYCEQWLEPEQLAGLGRDGCLDLVMSFVVEPKLGCEQPVFITRYPA 213

Query: 244 PESALANIYPAD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
            ++ALA I      R   RFELY   +ELCN   EL DP EQR RF  +   ++      
Sbjct: 214 SQAALARISEHQGFRVAHRFELYIHGLELCNGYWELTDPAEQRARFAADNHLRRASGKPE 273

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +DE FLA L   +P+ +G+AMG DRL+ML  G+ NI +VI  P  ++
Sbjct: 274 MALDESFLAALETGLPECAGVAMGLDRLLMLKLGSRNIQDVIAFPIERA 322


>gi|50291447|ref|XP_448156.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527467|emb|CAG61107.1| unnamed protein product [Candida glabrata]
          Length = 543

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 83/338 (24%), Positives = 151/338 (44%), Gaps = 19/338 (5%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           +  R+ I  S+R +  E  FIE+++  L          + F +     D     L L+ +
Sbjct: 202 IRIRSSILKSIRNFLEERDFIEVETPILSSKSNGAV-AKPFMSSSKDFD----KLMLRVA 256

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   K+L+ +G  K+F    ++RN      H PEFT LE+Y+++ + E L+K   ++ +
Sbjct: 257 PELWLKRLIISGCNKVFEIGKSFRNEGIDGSHNPEFTTLEFYQSYLTMEDLIKLNEDLFK 316

Query: 142 ----------CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                        +   + +   +++  +   + + +      ++   +DL        +
Sbjct: 317 KIITDLTNNLTIKQYLPESLLELEDILKSNNWKFKRVEFLPTLSKELGVDLSQVKIEDSK 376

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALAN 250
               ++  + +      +   + S I +R+  E IE      +  TI+  +PA  S LA 
Sbjct: 377 QLLEVIPQKYKGQFFGKSSSYSSSQILNRLCSELIEEKYCNSSHPTIIYHHPAVISPLAK 436

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK-IYNETYP-IDED 308
             P D R TKRFEL+    E  NA +E   P  Q  +FE++ + K+    N+T   ID++
Sbjct: 437 SNPDDSRTTKRFELFIKGREYSNAYEEENCPQVQLEKFEQQARMKEDYGDNDTLSSIDQE 496

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           ++  +   MP   G  +G DRL ML+TG   I +V+  
Sbjct: 497 YINAMKWGMPPIGGFGLGIDRLCMLITGCQRIEQVLPF 534


>gi|261254134|ref|ZP_05946707.1| lysyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260937525|gb|EEX93514.1| lysyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 323

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 95/331 (28%), Positives = 160/331 (48%), Gaps = 23/331 (6%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYLQT 80
           L +R  I + +R++F +   +E+D+ ++ ++   + H+  F TE +   +   + LY  T
Sbjct: 14  LRQRADIVAKIRQFFAQRDVLEVDTPAMSHATVTDIHLHTFQTEFVGPGYADGRKLYFMT 73

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    + +LM +   ++
Sbjct: 74  SPEFHMKRLLAAGSGCIYQINKAFRNEESGRYHNPEFTMLEWYRVGFDHHKLMDEMDALL 133

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   +                  E E ++  +AF     +          +     L L 
Sbjct: 134 QLVLQCG----------------EAERMSYQQAFMNVLGVCPLEGSMAELKTVAATLGLS 177

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
                     +     +   +    +E  +G +    +  +PA ++ALA I P D R   
Sbjct: 178 DIA-----EPEQDRDTLLQLLFSIGVENKIGQHVPAFVYDFPASQAALAKINPQDSRVAD 232

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
           RFE+Y   IEL N   EL +P EQ +RFE +  ++ ++     PID   +A L + +P+ 
Sbjct: 233 RFEVYFKGIELANGFHELDNPQEQLNRFESDNAKRIEMGLAPQPIDHHLIAALQSGLPEC 292

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 293 AGVALGIDRLIMLAIGCDHIDQVTAFPFPRA 323


>gi|82596159|ref|XP_726146.1| lysyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23481432|gb|EAA17711.1| lysyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 644

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 85/408 (20%), Positives = 161/408 (39%), Gaps = 74/408 (18%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D  Y+ R               ++ R  I   +R + ++ +++E+D+ 
Sbjct: 252 LLPLPDKHKGMKDIEYKYRKRYLDFLTNNEQKEKIITRFNIIQEVRRFLLKKKYLEVDTP 311

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKK-LLAAGEEKIFCFAHAWRN 106
            LQ   G  +  + F T L     +   LYL+ +PE   KK +++   EKIF  +  +RN
Sbjct: 312 MLQLVAGGAS-AKPFETHLKS---LDLVLYLRIAPELFLKKLIISGISEKIFELSKCFRN 367

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                +H PEFTMLE Y+++ +Y+ +MK    +I+       +K       +    ++ E
Sbjct: 368 EGLSTIHNPEFTMLEIYKSYANYKYMMKFTKKLIKN----VAKKFSISSPYSSILQNKWE 423

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD---TWSDIFSRILI 223
             +  +    Y +I+                Y +A+   I    +     W  +   +  
Sbjct: 424 KKSFIKIIKEYTSINFLK-------LSFDQAYEKAKDLNITFDQEKSALNWGLVVEEVFK 476

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           +KIEP    N    +   P+  S L+     + + ++RFE Y   +E+ N   E  + + 
Sbjct: 477 KKIEP-FLPNHPIHIYHLPSETSPLSKTLNKNKKLSERFETYIGKMEIANGYSEEANTLI 535

Query: 284 QRHRFEKEMQEKKKI----------------------------------------YNETY 303
           Q  +F  +   K K                                          NE +
Sbjct: 536 QEKKFWLQRYLKNKNCNKQKSNFISNKDNYQNETNDENNPSKDIDIKKKYIFKHTKNENH 595

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            ID D++  L   +P + G+ +G DRL ML+T +++I  ++  P  + 
Sbjct: 596 EIDYDYITALAHGLPPTGGLGIGIDRLCMLLTNSSSIKNILPFPIIKP 643


>gi|262273028|ref|ZP_06050847.1| lysyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262222938|gb|EEY74244.1| lysyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 323

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 95/343 (27%), Positives = 152/343 (44%), Gaps = 26/343 (7%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L  R  + + +R +F E    E+D+ ++  +   + H+  F T+ +  
Sbjct: 5   WRPTAEI---ETLKARARLVNDIRCFFAERDVWEVDTPAMSQATVTDVHLHTFKTDFVGP 61

Query: 70  D-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                 PLY+ TSPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR    
Sbjct: 62  GFAKGIPLYMMTSPEFHMKRLLAAGSGAIYQINKAFRNEEAGRNHNPEFTMLEWYRPGFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM +   +++    V N                 E +T  EAF +   +        
Sbjct: 122 HHALMDEMDALLQRVLGVKNA----------------ERMTYQEAFIKVLGV-----CPL 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
               D                 ++    +   +    +E  +G      +  +PA ++AL
Sbjct: 161 EGSMDELKAAAALLGLSDIADQEEDRDTLLQLLFSVGVEAQIGQTVPAFIYNFPASQAAL 220

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A +   D R   RFE+Y   IEL N   EL D  EQ  RFE++ ++++K+  +  PID  
Sbjct: 221 ARVCENDNRVAARFEVYFKGIELANGFYELDDANEQLARFEEDNRKREKMGLQPQPIDHH 280

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +  L   +P+ +G+A+G DRL+ML     +I++VI  P  ++
Sbjct: 281 LIDALRHGLPECAGVALGVDRLIMLALDKAHIDDVIAFPVGRA 323


>gi|323498097|ref|ZP_08103101.1| poxB regulator PoxA [Vibrio sinaloensis DSM 21326]
 gi|323316808|gb|EGA69815.1| poxB regulator PoxA [Vibrio sinaloensis DSM 21326]
          Length = 323

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 96/333 (28%), Positives = 159/333 (47%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK-PLYLQT 80
           L +R  + + +R +F E   +E+D+ ++ ++   + H+  F TE +   +     LY  T
Sbjct: 14  LRQRAKLINQIRHFFAERDVLEVDTPAMSHATVTDIHLHTFQTEFVGPGYADGSKLYFMT 73

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+    A+RN E G  H PEFTMLEWYR   ++  LM +   ++
Sbjct: 74  SPEFHMKRLLAAGSGCIYQINKAFRNEENGRYHNPEFTMLEWYRVGFTHHNLMDEMDKLL 133

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      +                 E +T  +AF     +        P +     L L 
Sbjct: 134 QLVLACGDA----------------ERMTYQQAFINVLGV-------CPLEATMTELKLV 170

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A + G+      +     +   +    +E  +G      +  +PA ++ALA I   D R 
Sbjct: 171 ASRLGLSDIAEPEQDRDTLLQLLFSIGVESKIGQQVPAFVYDFPASQAALAKINLEDDRV 230

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL D  EQ  RF+++  ++ ++  +  PID   +A L   +P
Sbjct: 231 ADRFEVYFKGIELANGFHELDDANEQLKRFQQDNSKRIEMGLDPQPIDHHLIAALESGLP 290

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 291 ECAGVALGIDRLIMLAIGCDHIDQVTAFPFPRA 323


>gi|300113203|ref|YP_003759778.1| lysyl-tRNA synthetase-like protein GenX [Nitrosococcus watsonii
           C-113]
 gi|299539140|gb|ADJ27457.1| lysyl-tRNA synthetase-related protein GenX [Nitrosococcus watsonii
           C-113]
          Length = 332

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 100/338 (29%), Positives = 153/338 (45%), Gaps = 27/338 (7%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI--RKPL 76
           +  L  R  + +++R +F     +E+++  L  +     H+ +  T           + L
Sbjct: 14  KKVLEARARLLANIRHFFARRGVLEVETPILSTAAATAPHLHSLVTAYQGPQAPKEGQQL 73

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           +LQTSPE + K+LLAAG   I+  A  +RNGE G  H PEFT+LEWYR    +  LM + 
Sbjct: 74  FLQTSPEHAMKRLLAAGSGPIYQVARVFRNGENGRRHNPEFTLLEWYRPGFDHLALMAEV 133

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
            +++                         E ++  E F RY  ID        D+    L
Sbjct: 134 DSLLSLLLGTPVG----------------ERLSYREVFHRYLEID---VFTASDKTLARL 174

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
              Q  + G+              +L   IEP LG      +  YPA E+ LA I P   
Sbjct: 175 ANAQGFRDGVARG-GQARQIYLDFLLATIIEPRLGGERPCFIYDYPASEAQLARIRPPSE 233

Query: 257 RF----TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
                  +RFE+Y   +EL N   EL D +EQR RFE ++ ++++      P+DE  LA 
Sbjct: 234 SCPRPLAERFEVYLKGMELANGYHELCDAVEQRQRFEADLIQRRRRGLSEVPLDEFLLAA 293

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           L   +P+ +G+A+G DRL+ML   +  I EV+  P  +
Sbjct: 294 LEQGLPECAGVALGVDRLLMLQLNSARIEEVLAFPLMR 331


>gi|330444991|ref|ZP_08308645.1| regulator of pyruvate oxidase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328493109|dbj|GAA03142.1| regulator of pyruvate oxidase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 322

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 91/331 (27%), Positives = 156/331 (47%), Gaps = 23/331 (6%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYLQT 80
           L +R  + + +R++F E + +E+D+ ++  +   + H+  F TE +   +   + LYL T
Sbjct: 13  LKQRAYLLAVIRQFFAEREVMEVDTPAMSQATVTDIHLHTFQTEFVGPGYADGQTLYLMT 72

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LL+AG   I+    ++RN E G  H PEFTMLEWYR +  +  LM +  +++
Sbjct: 73  SPEFHMKRLLSAGSGAIYQICKSFRNEESGRYHNPEFTMLEWYRPNFDHHLLMDEMDDLL 132

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +        +  ++Q                      A ID               +   
Sbjct: 133 QLVLGCGAAEKMTYQQ---------------------AFIDQLGVCPLTGSMAELKVAAA 171

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A         ++    +   +    +E  +G      +  +PA ++ALA I P D R  +
Sbjct: 172 ALGLSDIAEPEEDRDTLLQLLFSIGVEGKIGQQVPAFVYDFPASQAALAQINPTDSRVAE 231

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
           RFE+Y   IEL N   EL +  EQ  RFE++ Q++ ++  +  PID + +  L    P  
Sbjct: 232 RFEVYFKGIELANGFHELANGDEQLQRFEQDNQKRIEMGLQPQPIDMNLVNALRAGFPDC 291

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +G+A+G DRL+ML  G ++I +V   P  ++
Sbjct: 292 AGVALGIDRLIMLAMGLDHIEKVTAFPIDRA 322


>gi|119946883|ref|YP_944563.1| lysyl-tRNA synthetase-related protein GenX [Psychromonas ingrahamii
           37]
 gi|119865487|gb|ABM04964.1| lysyl-tRNA synthetase-related protein GenX [Psychromonas ingrahamii
           37]
          Length = 326

 Score =  236 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 97/343 (28%), Positives = 154/343 (44%), Gaps = 31/343 (9%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W      +    L +R  I  ++R +F+    +E+++  L  +   + H+  F T  +  
Sbjct: 3   WKPSASIKE---LKQRAKILQAIRHFFITRGLLEVETPILSQAGVTDIHLFCFQTHFMGP 59

Query: 70  -------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
                  +    PLYLQTSPEF  K+LL+AG   IF  +  +RN E G  H PEFT+LEW
Sbjct: 60  QISSSKPEAQGTPLYLQTSPEFHMKRLLSAGSGCIFQISKVFRNEESGRFHNPEFTLLEW 119

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR    + +LM +   +++   +                       T   AF     +D 
Sbjct: 120 YRVGFDHFRLMDEMDQLLQFILK----------------SETARRCTYQNAFLEVLAVDP 163

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            T      +     L L     G  ++ +     +   +    IEP +  +    +  +P
Sbjct: 164 LTASLEQLKTSGEKLNL-----GEVLSEEPDRDTVLQLLFCIAIEPVIAQHKPCFIYNFP 218

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A ++ALA I P D R  +RFE+Y   IEL N   EL D  EQ  RF+ + + + +     
Sbjct: 219 ASQAALARISPTDKRVAERFEVYFQGIELANGFHELSDGQEQLRRFQADNRLRSRKGLAQ 278

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            PID +F++ L  +P  +G+A+G DRLVML     +I++VI  
Sbjct: 279 MPIDGNFISSLATLPDCAGVALGVDRLVMLACEKKHIDDVISF 321


>gi|197124172|ref|YP_002136123.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter sp. K]
 gi|196174021|gb|ACG74994.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter sp. K]
          Length = 339

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 118/324 (36%), Positives = 183/324 (56%), Gaps = 10/324 (3%)

Query: 28  IQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH-IRKPLYLQTSPEFSC 86
           + + +R       + E+++ SL  +PG E HI AF    + +     +PL+LQ SPE++ 
Sbjct: 15  LSAEVRRILGGLGYEEVETPSLVPAPGMEPHIDAFQATFVPEGGGASRPLWLQNSPEYAM 74

Query: 87  KKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV 146
           K+LLA G E++F  A  +RNGE    H PEFTMLE+YRA   Y  +M D   ++  AA  
Sbjct: 75  KRLLADGFERVFQLARVFRNGEVSRTHNPEFTMLEFYRAGTDYRGIMADLEVLVEGAARA 134

Query: 147 A---NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
                +             +  E +TVAEAF R+A +DL     + D+  R      A++
Sbjct: 135 LLPGGEPRVRRNGRVLWLGAPFETLTVAEAFRRHAGVDLEACAGDADRLAR-----AARE 189

Query: 204 AGIRV-AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           AG       + + D+F R++++ +EP LG++  T L  +PA  +AL+ +  ADPR+ +RF
Sbjct: 190 AGHDPGPPGEPFDDVFFRVMLDAVEPRLGVDRPTWLVDWPASMAALSKVKAADPRWAERF 249

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGI 322
           ELYA  +EL N   EL D  EQR R  +E   ++++    YP+DE FL  +  MP++ G+
Sbjct: 250 ELYAGGLELANGFTELTDAREQRARLVEEQALRRRLGRPAYPLDERFLEAVGRMPEAGGV 309

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A+GFDR++ML+TGA +I +V+  P
Sbjct: 310 AVGFDRVLMLLTGAASIEDVLLFP 333


>gi|83767852|dbj|BAE57991.1| unnamed protein product [Aspergillus oryzae]
          Length = 531

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 75/337 (22%), Positives = 133/337 (39%), Gaps = 15/337 (4%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R+ I   LR++F++  F+E+++  +    G     R F T         + L L+
Sbjct: 200 DIIKARSAIIQYLRQFFLDRSFMEVNTPIVNSIAGGAI-ARPFYTSATEF--PDRQLSLR 256

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +++F    ++RN      H PEFT  E+Y A+ + E L+    ++
Sbjct: 257 IAPELWLKRLVVGGFDRVFEIGPSFRNEGIDKTHNPEFTTCEFYHAYANLEDLLSMTESL 316

Query: 140 IRCAAEVANQKIF--SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +   A+         + +    +  +    I                  D         +
Sbjct: 317 LSGMAQHIRDTNKDGTLKPTEVDFSTPFRRIDFLTGIEEKIG---RKLPDLTSPDAVAQV 373

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYP-A 254
               +   + +    T   +   +    +EP       T +   P   S    + I+P  
Sbjct: 374 KQLFKDLSLEIPEAPTLPRLLDELCSIYVEPECV--NPTFIINPPECLSPLSKSFIHPVT 431

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
             R   R EL+    E+ N  +E   P EQR +FE +++  K    E+  IDE +L  L 
Sbjct: 432 GQRVAARGELFIEGKEVVNTYEEENSPSEQRRKFEDQVRYSKDAD-ESSEIDESYLEALE 490

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +P + G   G DRL ML TGA  I +V+     ++
Sbjct: 491 WGLPATGGWGCGIDRLCMLFTGAKRIADVLPFGTLRA 527


>gi|332140131|ref|YP_004425869.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550153|gb|AEA96871.1| lysyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 322

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 164/345 (47%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL-II 68
           W     +  R   + R  I  ++RE+F     +E+++  L      + H+ AF T     
Sbjct: 4   WQPTATHEAR---VARAEILRTIREFFHRKNVLEVETPLLSKGTVTDEHLDAFYTAFNFD 60

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
           +      LYLQTSPE++ K+LL A    I+    A+R+  +G  H PEFTMLEWYR    
Sbjct: 61  RSGKPTRLYLQTSPEYAMKRLLCAESGSIYQICKAFRHEGEGRWHNPEFTMLEWYRVGFD 120

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM +   +++                        + +T  +AF  Y NID       
Sbjct: 121 HFALMDEVDALLQETLSTL----------------PADTMTYQDAFLTYLNID------- 157

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDI--FSRILIEKIEPNLGINCCTILDRYPAPES 246
           P       L    +Q GI +   +  S       +    IEP +G +    +  +PA ++
Sbjct: 158 PLSASNDELLGAMKQQGIDIHEPENLSFDSKLQLLFSYVIEPQIGSDKPCFIYNFPASQA 217

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA +   DPR  +RFE+Y    EL N  +EL    EQR RFE + ++++     T PID
Sbjct: 218 ALAKLSATDPRVAERFEVYFKGAELANGFNELSAAKEQRVRFESDNEKRRASGLVTKPID 277

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E+FL  L   +P  +G+A+G DRL+ML TGAN+INEVI    S++
Sbjct: 278 ENFLNALEVGLPLCAGVALGVDRLLMLKTGANHINEVINFTVSRA 322


>gi|307069665|ref|YP_003878142.1| lysyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
 gi|306482925|gb|ADM89796.1| lysyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
          Length = 495

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 95/363 (26%), Positives = 158/363 (43%), Gaps = 24/363 (6%)

Query: 1   MHQIPSQPWWNRD--FHYRR----------RPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P++ + N +   +Y+R              +KR MI + +R +F +N F+E+++  
Sbjct: 143 LRPLPNKIYNNLNYKKYYKRYLDFIMNSENMNIFIKRIMIINKIRSFFKKNNFLEVETPI 202

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L   PG       F T     +   K ++L+ SPE   KKL+  G E+I+    ++RN  
Sbjct: 203 LHNIPGGA-EAIPFIT---YHNKFYKKMFLRISPELYLKKLIIGGFERIYEINKSFRNEG 258

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT+LE+Y  + +Y+ +MK     I+      N+            F      
Sbjct: 259 ISSTHNPEFTILEFYITYVNYKWIMKFVEKFIKNIIYKTNKNYIINYKNFKINFK----K 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS-RILIEKIE 227
              +     A I       N       L     +              I   + ++ +I+
Sbjct: 315 KFKKYSILQAIIKYKPKYKNYLFNFNFLYNKILKNKKKINKIKLFKYTILELQYILFEIK 374

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               I   T +  YP+  S L+        FT+RFEL+  N+E+ N   EL DP +Q  R
Sbjct: 375 IIPKIIFPTFIINYPSLNSPLSLRKKNK-FFTERFELFIFNLEIANGFTELNDPEDQDIR 433

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F K++ EK K   + Y  D D++  L   MP +SG  +G DRLVM++   +NI ++I  P
Sbjct: 434 FNKQILEKNKKNIK-YNYDYDYIKALEYGMPPTSGCGIGIDRLVMILNNISNIKDIILFP 492

Query: 347 FSQ 349
           + +
Sbjct: 493 YIK 495


>gi|310823466|ref|YP_003955824.1| lysyl-tRNA synthetase-like protein genx [Stigmatella aurantiaca
           DW4/3-1]
 gi|309396538|gb|ADO73997.1| lysyl-tRNA synthetase-like protein GenX [Stigmatella aurantiaca
           DW4/3-1]
          Length = 345

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 112/325 (34%), Positives = 172/325 (52%), Gaps = 10/325 (3%)

Query: 25  RNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK--PLYLQTSP 82
           R M+ ++LR +F+   ++E+++  L  +PG E HI AF    + +  + +  PLYL TSP
Sbjct: 23  RQMLYAALRRFFMGQGYLEVETPLLIPTPGMEPHITAFEVPFVPETDVGQARPLYLHTSP 82

Query: 83  EFSCKKLLA-AGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           E++ K++LA      +F     +RNGE    H PEFTMLE+YR H  Y  +M D    + 
Sbjct: 83  EYAMKRMLADGAHGPLFQICKVFRNGEVSVTHNPEFTMLEFYRPHVDYHAIMADLEQALA 142

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
             A  +        + +       E +TV +A  R   +DL    D P       L   A
Sbjct: 143 E-AGRSAAPGEPGADPSFFTRLPYERLTVRDAVLRATGVDLRACPDGPS------LKRAA 195

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           + AG+R      + D+F  + ++K+E  LG    T L  YPA  ++L+ + P DP   +R
Sbjct: 196 EAAGVRTGEATGFDDVFFHLFLQKVERGLGHERPTFLIEYPASMASLSRLKPGDPSVAER 255

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSG 321
            ELYA  +EL N   EL D +EQR RF +E   ++ +    YP+DE FL  +  MP ++G
Sbjct: 256 VELYAKGLELANGFSELTDAVEQRARFVEEQALRRALGRTVYPLDERFLEAVGRMPPAAG 315

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA+G DR++ML+ GA +I +V+  P
Sbjct: 316 IAVGLDRILMLLMGAGSITDVLLFP 340


>gi|108758409|ref|YP_633718.1| putative lysyl-tRNA synthetase-related protein GenX [Myxococcus
           xanthus DK 1622]
 gi|108462289|gb|ABF87474.1| putative lysyl-tRNA synthetase-related protein GenX [Myxococcus
           xanthus DK 1622]
          Length = 346

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 179/346 (51%), Gaps = 18/346 (5%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
            +P+   W        R     R  + S+LR +F  + ++E+++  L  +PG E HI AF
Sbjct: 12  PMPNLSQW--------RAA-RGRQSLYSALRRFFAAHGYLEVETPLLIPTPGMEPHINAF 62

Query: 63  STELIIQDHIR--KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
               I +  +   + LYL +SPE++ K+LLA G   +F     +RNGE    H PEFTML
Sbjct: 63  EAGFIPETDVGSARTLYLHSSPEYAMKRLLADGAGPLFQLCKVFRNGEVSPTHNPEFTML 122

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E+YR H  Y  +M D    +   A     +     +      +  E +TV +A  R   +
Sbjct: 123 EFYRPHADYHAIMDDLEGALAE-AGRGATEGEPGADPLFFTRTPYERLTVRDAVLRATGV 181

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D+    D P       L   A+ AG+R  + +T+ D+F  + ++K+E  LG    T L  
Sbjct: 182 DIRQHSDGPS------LKRAAEAAGVRTGNAETFDDVFFHLFLQKVETGLGHERPTFLIE 235

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YPA  +AL+ + P D    +R ELYA  +EL N   EL DP+EQR R  +E + ++++  
Sbjct: 236 YPASMAALSRLKPGDAVVAERVELYAKGLELANGFSELTDPVEQRARLTEEQELRRQLGR 295

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             YP+DE FL  +  MP S+GIA+G DR++ML+ G   I++V+  P
Sbjct: 296 AVYPLDERFLDAVGRMPPSAGIAVGLDRILMLLLGVQRISDVLLFP 341


>gi|90413347|ref|ZP_01221340.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325589|gb|EAS42058.1| lysyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 323

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 30/342 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W      ++   L +R  + SS+R +F     IE+D+ ++  +   + H+  F TE +  
Sbjct: 5   WQPTASIKQ---LKQRAAVLSSIRNFFAGKGVIEVDTPAMSQATVTDVHLHTFQTEFVGP 61

Query: 70  D-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                + LY+ TSPEF  K+LL+AG   I+    ++RN E G  H PEFTMLEWYR    
Sbjct: 62  GFAGGQTLYMMTSPEFHMKRLLSAGSGPIYQICKSFRNEESGRYHNPEFTMLEWYRPDFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM +   +++   +                  + E ++  +AF +   +        
Sbjct: 122 HHDLMNEMDELLQLVLQC----------------DKAERMSYQQAFIQVLGV-------C 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L   A+  G+      +     +   +    +E  +G+     +  +PA ++
Sbjct: 159 PLEGTMDQLKGVARTLGLADIADPEQDRDTLLQLLFSIGVEGEIGLQAPAFVYDFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I   D R  +RFE+Y   IEL N   EL +  EQ  RFE++  ++  +  +  PID
Sbjct: 219 ALAQINSTDNRVAERFEVYFKGIELANGFHELANGDEQLVRFEQDNIKRIHMGLKPQPID 278

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +  L    P  +G+A+G DRL+ML    ++I++V   P 
Sbjct: 279 LHLIEALRAGFPDCAGVALGIDRLIMLALKLDHIDQVTAFPI 320


>gi|220918952|ref|YP_002494256.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956806|gb|ACL67190.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 339

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 116/324 (35%), Positives = 182/324 (56%), Gaps = 10/324 (3%)

Query: 28  IQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH-IRKPLYLQTSPEFSC 86
           + + +R       + E+++ SL  +PG E HI AF    + +     +PL+LQ SPE++ 
Sbjct: 15  LSAEVRRILGGLGYEEVETPSLVPAPGMEPHIDAFQATFVPEGGGASRPLWLQNSPEYAM 74

Query: 87  KKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV 146
           K+LLA G E++F  A  +RNGE    H PEFTMLE+YRA   Y  +M D   ++  AA  
Sbjct: 75  KRLLADGFERVFQLARVFRNGEVSRTHNPEFTMLEFYRAGTDYRGMMADLEALLEGAARA 134

Query: 147 A---NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
                +   +         +  E +TVAEAF R+A +DL     + D+  R      A++
Sbjct: 135 LLPGGEPRVTRNGRALWLGAPFETLTVAEAFRRHAGVDLEACAGDADRLAR-----AARE 189

Query: 204 AGIRV-AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           AG       + + D+F R++++ +EP LG++  T L  +PA  +AL+ +   DPR+ +RF
Sbjct: 190 AGHDPGPPGEPFDDVFFRVMLDAVEPRLGVDRPTWLVDWPASMAALSKVKAGDPRWAERF 249

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGI 322
           ELYA  +EL N   EL D  EQR R  +E   ++++    YP+DE FL  +  MP++ G+
Sbjct: 250 ELYAGGLELANGFTELTDAREQRARLVEEQALRRRLGRPAYPLDERFLEAVGRMPEAGGV 309

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A+GFDR++ML+TG  +I +V+  P
Sbjct: 310 AVGFDRVLMLLTGGASIEDVLLFP 333


>gi|332994504|gb|AEF04559.1| lysyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 322

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 99/345 (28%), Positives = 157/345 (45%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W     +  R   + R  +  S+R +F     +E+++  L      + H+ AF T+    
Sbjct: 4   WQPTSSHDSR---IARANLLRSIRHFFYTRDVLEVETPLLSSGTVTDEHLDAFLTKFNHS 60

Query: 70  -DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            D     LYLQTSPEF+ K+LL      I+    A+R+  +G  H PEFTMLEWYR    
Sbjct: 61  RDGAPVDLYLQTSPEFAMKRLLCGQSGAIYQICKAFRHEGEGRWHNPEFTMLEWYRPGFD 120

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM++   ++         +I                I+  + F     ID  T  D 
Sbjct: 121 HHALMQEVDALLIETLGTDAGEI----------------ISYQDVFKFRLGIDPLTATD- 163

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDI--FSRILIEKIEPNLGINCCTILDRYPAPES 246
                  +L  +     I ++  +          +    IEP +G      +  +PA ++
Sbjct: 164 ------EMLLAKMADCNIDISSPEQLDKDSKLQLLFSMAIEPVIGQERPCFVFGFPASQA 217

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +LA I   D R   RFE+Y    EL N   EL +  EQ+ RFE++ ++++K      PID
Sbjct: 218 SLARINAQDSRTADRFEVYFKGAELANGFHELNEASEQKQRFEQDNEKRRKNGQPVKPID 277

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             FL+ L   +P  +G+A+G DRL+ML  GA++I EV+  P S++
Sbjct: 278 TRFLSALENGLPHCAGVALGIDRLLMLKIGASHIQEVLNFPVSRA 322


>gi|315178905|gb|ADT85819.1| lysyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 324

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 163/349 (46%), Gaps = 30/349 (8%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           S+  W       +   L +R  + S +R++F E   +E+D+ ++ ++   + H+  F T+
Sbjct: 2   SKSEWMPTASIEQ---LKQRAALLSRIRQFFAERDVLEVDTPAMSHATVTDVHLHTFQTQ 58

Query: 66  LIIQD-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
            +       + L+L TSPEF  K+LLAAG   I+  A A+RN E G  H PEFTMLEWYR
Sbjct: 59  FVGPGYATGRHLHLMTSPEFHMKRLLAAGSGSIYQMAKAFRNEENGRYHNPEFTMLEWYR 118

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
               +  LM +   +++   +                    E +T  +AF     +    
Sbjct: 119 VGFDHHDLMDEMDALLQMTLQTGAS----------------ERLTYQQAFLTVLGV---- 158

Query: 185 TLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
               P +     L   A   G+      +     +   +    +E N+G +    +  +P
Sbjct: 159 ---CPLEGSMAELKQAATSLGLSDIAEPETDRDTLLQLLFSMGVEGNIGQHVPAFVYDFP 215

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A ++ALA I P D R   RFE+Y   IEL N   EL +P EQ  RFE +  ++  +    
Sbjct: 216 ASQAALAKINPHDARVADRFEVYFKGIELANGFHELDNPREQLARFEADNAKRIDMGLAP 275

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            PID   +A L   +P  +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 276 QPIDYHLIAALEAGLPACAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 324


>gi|260770862|ref|ZP_05879791.1| lysyl-tRNA synthetase-related protein [Vibrio furnissii CIP 102972]
 gi|260614099|gb|EEX39289.1| lysyl-tRNA synthetase-related protein [Vibrio furnissii CIP 102972]
          Length = 318

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 99/333 (29%), Positives = 159/333 (47%), Gaps = 27/333 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD-HIRKPLYLQT 80
           L +R  + S +R++F E   +E+D+ ++ ++   + H+  F T+ +       + L+L T
Sbjct: 9   LKQRAALLSRIRQFFAERDVLEVDTPAMSHATVTDVHLHTFQTQFVGPGYATGRHLHLMT 68

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+  A A+RN E G  H PEFTMLEWYR    +  LM +   ++
Sbjct: 69  SPEFHMKRLLAAGSGSIYQMAKAFRNEENGRYHNPEFTMLEWYRVGFDHHDLMDEMDALL 128

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   +                    E +T  +AF     +        P +     L   
Sbjct: 129 QMTLQTGAS----------------ERLTYQQAFLTVLGV-------CPLEGSMAELKQA 165

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A   G+      +     +   +    +E N+G +    +  +PA ++ALA I P D R 
Sbjct: 166 AASLGLSDIAEPETDRDTLLQLLFSMGVEGNIGQHVPAFVYDFPASQAALAKINPHDARV 225

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RFE +  ++  +     PID   +A L   +P
Sbjct: 226 ADRFEVYFKGIELANGFHELDNPREQLARFEADNAKRIDMGLAPQPIDYHLIAALEAGLP 285

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +G+A+G DRL+ML  G ++I++V   PF ++
Sbjct: 286 ACAGVALGIDRLIMLALGEDHIDKVTAFPFPRA 318


>gi|209363652|ref|YP_001423482.2| hypothetical protein CBUD_0046 [Coxiella burnetii Dugway 5J108-111]
 gi|207081585|gb|ABS77687.2| hypothetical protein CBUD_0046 [Coxiella burnetii Dugway 5J108-111]
          Length = 343

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 98/330 (29%), Positives = 161/330 (48%), Gaps = 26/330 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
             R  +   +R++F E + +E+++  L      + HI +F T  +     ++  YLQTSP
Sbjct: 38  RLRAQLLRDIRQFFAERKVMEVETPILSQHTVTDIHIDSFQTTYL-NGKEKQHYYLQTSP 96

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
           E++ K+LL+AG   I+    A+RNGE G  H PEF+MLEWYR   S   LM +   +++ 
Sbjct: 97  EYAMKRLLSAGSGPIYQICKAFRNGESGSQHNPEFSMLEWYRPDFSCHDLMDEMDELLQF 156

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
             +                  +   IT  E F ++  I       NP Q   H L   A 
Sbjct: 157 ILQ----------------SKKASRITYEELFLKHLGI-------NPHQISLHQLQSLAN 193

Query: 203 QAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           Q  +  + +    + +   +  E +EP +G +    +  +PA ++AL+ I P DP    R
Sbjct: 194 QFSLENSTEYNDRNTLLQFLFSECLEPKIGFDAPLFVYHFPATQAALSKINPQDPNVALR 253

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           FE+Y   +E  N  +EL +  EQR RF  +  ++ +    +  IDE FLA L   +P  +
Sbjct: 254 FEVYIQGMECANGFEELTNADEQRQRFLNDNTKRNQQNRPSINIDERFLAALIHGLPPCA 313

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           G+A+G DRL+M+      I++VI  P+ ++
Sbjct: 314 GVAVGLDRLIMIKAERKCIDDVINFPWERA 343


>gi|54310444|ref|YP_131464.1| lysyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81614829|sp|Q6LM16|SYK3_PHOPR RecName: Full=Uncharacterized protein YjeA
 gi|46914885|emb|CAG21662.1| putative lysyl-tRNA synthetase-related protein [Photobacterium
           profundum SS9]
          Length = 323

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 93/343 (27%), Positives = 159/343 (46%), Gaps = 30/343 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W      ++   L +R  + SS+R++F   + IE+D+ ++  +   + H+  F TE +  
Sbjct: 5   WQPTASIKQ---LKQRAAVLSSIRDFFAGKEVIEVDTPAMSQATVTDVHLHTFQTEFVGP 61

Query: 70  DHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +   + LY+ TSPEF  K+LL+AG   I+    ++RN E G  H PEFTMLEWYR    
Sbjct: 62  GYAGGQTLYMMTSPEFHMKRLLSAGSGPIYQICKSFRNEESGRYHNPEFTMLEWYRPDFD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM +   +++   +                  + E ++  +AF +   +        
Sbjct: 122 HHDLMNEMDELLQLVLQC----------------DKAERMSYQQAFIQELGV-------C 158

Query: 189 PDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P +     L   A+  G+      +     +   +    +E  +G      +  +PA ++
Sbjct: 159 PLEGTMEQLKGVARTLGLADIADPEQDRDTLLQLLFSMGVENKIGQQVPAFVYDFPASQA 218

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I P D R  +RFE+Y   IEL N   EL +  EQ  RFE++  ++  +  +  PID
Sbjct: 219 ALAQINPTDNRVAERFEVYFKGIELANGFHELANGDEQLVRFEQDNMKRISMGLKPQPID 278

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +  L    P  +G+A+G DRL+ML    ++I++V   P  
Sbjct: 279 LHLIEALRAGFPDCAGVALGIDRLIMLALKLDHIDQVTAFPID 321


>gi|146322444|ref|XP_750194.2| lysyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|129557020|gb|EAL88156.2| lysyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
          Length = 566

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 82/340 (24%), Positives = 137/340 (40%), Gaps = 21/340 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R+ I   LR++F++  F+E+ +  +    G     R F T         + L L+
Sbjct: 226 DIIRARSAIIQFLRQFFLDRSFMEVSTPIIGSIAGGAI-ARPFQTSATEF--PDRQLSLR 282

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +K+F    ++RN      H PEFT  E+Y A+ + E LM    N+
Sbjct: 283 IAPELWLKRLVVGGFDKVFEIGPSFRNEGLDKTHNPEFTTCEFYHAYANLEDLMSITENL 342

Query: 140 IRCAAEVANQ--KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +   A    +  K  S +    +  +    +           I+       PD      L
Sbjct: 343 LSGMAAHIQEFNKNASLKPPEVDFSAPFRRVDFT------TGIEGKIGRRLPDLTTPDAL 396

Query: 198 YLQAQ---QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIY 252
              +Q      + +  + T   +   +    +EP       T +   P   S    + I+
Sbjct: 397 DQVSQLFRDLSLPIPKEPTLPRLLDELCGTYLEPEC--INPTFIINPPECLSPLSKSFIH 454

Query: 253 PADP-RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
           PA+  R   R EL+    E+ N  +E   P EQR +FE +++  K        IDE +L 
Sbjct: 455 PANQQRVAARAELFIDGREIVNTYEEENSPFEQRRKFEDQVRYTKGTDEPA-EIDESYLE 513

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L   +P + G   G DRL ML TG   I +V+     ++
Sbjct: 514 ALEWGLPSTGGWGCGIDRLCMLFTGTKRIGDVLPFGNLRA 553


>gi|27364671|ref|NP_760199.1| poxB regulator PoxA [Vibrio vulnificus CMCP6]
 gi|37681279|ref|NP_935888.1| lysyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320155067|ref|YP_004187446.1| lysyl-tRNA synthetase-related protein [Vibrio vulnificus MO6-24/O]
 gi|33301726|sp|Q8DCX0|SYK3_VIBVU RecName: Full=Uncharacterized protein YjeA
 gi|39932253|sp|Q7MGX9|SYK3_VIBVY RecName: Full=Uncharacterized protein YjeA
 gi|27360816|gb|AAO09726.1| Lysyl-tRNA synthetase (class II) [Vibrio vulnificus CMCP6]
 gi|37200030|dbj|BAC95859.1| lysyl-tRNA synthetase-related protein [Vibrio vulnificus YJ016]
 gi|319930379|gb|ADV85243.1| lysyl-tRNA synthetase-related protein [Vibrio vulnificus MO6-24/O]
          Length = 323

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 99/330 (30%), Positives = 162/330 (49%), Gaps = 27/330 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD-HIRKPLYLQT 80
           L +R ++ +++R++F +   +E+D+ ++ ++   + H+  F TE +       + L+L T
Sbjct: 14  LRQRAVLIANIRQFFAQRGVLEVDTPAMSHATVTDIHLHTFQTEFVGPGYAQGRHLHLMT 73

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPEF  K+LLAAG   I+  A A+RN E G  H PEFTMLEWYR    + QLM +  +++
Sbjct: 74  SPEFHMKRLLAAGSGCIYQMAKAFRNEENGRHHNPEFTMLEWYRVGFDHHQLMDEMDDLL 133

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   +                    E +T  +AF     +        P +     L   
Sbjct: 134 QLILKCGTA----------------ERMTYQQAFLTVLGV-------CPLEGSMAELKSV 170

Query: 201 AQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A + G+      ++    +   +    +E  +G      +  +PA ++ALA I P DPR 
Sbjct: 171 AARLGLSDIAEPEEDRDTLLQLLFSIGVEAKIGQQVPAFVYDFPASQAALAKINPNDPRV 230

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             RFE+Y   IEL N   EL +P EQ  RFE++  ++  +     PID   +A L   +P
Sbjct: 231 ADRFEVYFKGIELANGFHELDNPQEQLTRFEQDNAKRIDMGLTPQPIDYHLIAALESGLP 290

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +G+A+G DRL+ML  G  +I+E+   PF
Sbjct: 291 ACAGVALGVDRLIMLSLGCTHIDEITAFPF 320


>gi|119496887|ref|XP_001265217.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119413379|gb|EAW23320.1| lysyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 467

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 83/340 (24%), Positives = 137/340 (40%), Gaps = 21/340 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R+ I   LR++F++  F+E+ +  +    G     R F T         + L L+
Sbjct: 127 DIIRARSAIIQFLRQFFLDRSFMEVSTPIIGSIAGGAM-ARPFQTSATEFS--DRQLSLR 183

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +K+F    ++RN      H PEFT  E+Y A+ + E LM    N+
Sbjct: 184 IAPELWLKRLVVGGFDKVFEIGPSFRNEGLDKTHNPEFTTCEFYHAYANLEDLMSITENL 243

Query: 140 IRCAAEVANQ--KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +   A    +  K  S +    +  +    +           I+       PD      L
Sbjct: 244 LSGMAAHIQEFNKNASLKPPEVDFSAPFRRVDFT------TGIEGKIGRRLPDLTTPDAL 297

Query: 198 YL---QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIY 252
                  +   + +  D T   +   +    +EP       T +   P   S    + I+
Sbjct: 298 DQVNQLFRDLSLPIPKDPTLPRLLDELCGTYLEPEC--INPTFIINPPECLSPLSKSFIH 355

Query: 253 PADP-RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
           PA+  R   R EL+    E+ N  +E   P EQR +FE +++  K        IDE +L 
Sbjct: 356 PANQQRVAARAELFIDGREIVNTYEEENSPFEQRRKFEDQVRYNKGTDEPA-EIDESYLE 414

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L   +P + G   G DRL ML TGA  I +V+     ++
Sbjct: 415 ALEWGLPSTGGWGCGIDRLCMLFTGAKRIGDVLPFGNLRA 454


>gi|50310555|ref|XP_455297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644433|emb|CAG98005.1| KLLA0F04796p [Kluyveromyces lactis]
          Length = 517

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 10/330 (3%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R+++   +RE+  + +FIE+++  +        + + F T     D   +P  L+
Sbjct: 185 EAIYIRHLVTKRIREWLYKQEFIEVETPIISSKSNGA-NAKPFITHCTAIDK-EQPFELR 242

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L   G  KIF     +RN      H PEFT LE+Y+ + + EQL++   ++
Sbjct: 243 IAPELWLKRLCIGGMNKIFEIGKVFRNEGIDSTHNPEFTTLEFYQCYINMEQLIEMSESL 302

Query: 140 IRCAAEVANQ-KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +    +  ++ K     +       + + +       +   ID     DN D  +  LL 
Sbjct: 303 LIYVCQGIDKPKAQELLDQIKANNGKFKRLEFLPTLTQKTGID----FDNMDLNNAELLK 358

Query: 199 LQAQQAGIRVAHD-DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
            + ++A I ++    +   I   +  + IE        TI+  +P   S LA     + +
Sbjct: 359 EKLRKANISISESSVSPQQILDELCGKYIESQCDTLLPTIIYHHPTVLSPLAKTDSNNVQ 418

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TE 315
            TKRFE++    E  NA +E   P  Q  +F  ++  K +   +E   +D  ++  +   
Sbjct: 419 ITKRFEIFINRKEYMNAYEEENCPDLQLEKFTNQLASKTQFKDDEMMAVDLPYVQAMKYG 478

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           MP   G  +G DRL ML+     I EV+  
Sbjct: 479 MPPIGGFGLGIDRLCMLLADTQRIEEVLSF 508


>gi|159130672|gb|EDP55785.1| lysyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 478

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 82/340 (24%), Positives = 137/340 (40%), Gaps = 21/340 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R+ I   LR++F++  F+E+ +  +    G     R F T         + L L+
Sbjct: 138 DIIRARSAIIQFLRQFFLDRSFMEVSTPIIGSIAGGAI-ARPFQTSATEF--PDRQLSLR 194

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +K+F    ++RN      H PEFT  E+Y A+ + E LM    N+
Sbjct: 195 IAPELWLKRLVVGGFDKVFEIGPSFRNEGLDKTHNPEFTTCEFYHAYANLEDLMSITENL 254

Query: 140 IRCAAEVANQ--KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +   A    +  K  S +    +  +    +           I+       PD      L
Sbjct: 255 LSGMAAHIQEFNKNASLKPPEVDFSAPFRRVDFT------TGIEGKIGRRLPDLTTPDAL 308

Query: 198 YLQAQ---QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIY 252
              +Q      + +  + T   +   +    +EP       T +   P   S    + I+
Sbjct: 309 DQVSQLFRDLSLPIPKEPTLPRLLDELCGTYLEPEC--INPTFIINPPECLSPLSKSFIH 366

Query: 253 PADP-RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
           PA+  R   R EL+    E+ N  +E   P EQR +FE +++  K        IDE +L 
Sbjct: 367 PANQQRVAARAELFIDGREIVNTYEEENSPFEQRRKFEDQVRYTKGTDEPA-EIDESYLE 425

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L   +P + G   G DRL ML TG   I +V+     ++
Sbjct: 426 ALEWGLPSTGGWGCGIDRLCMLFTGTKRIGDVLPFGNLRA 465


>gi|169836894|ref|ZP_02870082.1| lysyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 501

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 82/367 (22%), Positives = 148/367 (40%), Gaps = 29/367 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +  IP +   N++  +RRR              ++R+    + R++   N FIEI++  L
Sbjct: 139 LRPIPEK-LENKEERFRRRYLDMNVNQEVRQRFIRRSKFWQATRDFLNNNGFIEINTPVL 197

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           +Y+ G       F T +   D  ++  YL+ S E   K+L+ AG EK++     +RN   
Sbjct: 198 EYTTGGA-DANPFVTYMDALD--KQQFYLRISQELPLKRLIGAGFEKVYDLGPRFRNESY 254

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYI 168
              H PE   +EWY A+  +++      ++ +   +       F+ +  + +   E E  
Sbjct: 255 SDEHLPEHIAMEWYAAYWDWQKGRSFMEDMYKYVLKETFGTLKFNIKGFDIDMGREWEVW 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             AE  A++  ID+  T           +  + ++  + V   D+      ++     + 
Sbjct: 315 DYAEVIAKHYYIDVYNTT-------IEEVTKKLKENNLEVKKTDSIPRGIDKLWKNIRKD 367

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G      L   P   S LA     +P   +RF+      EL N   EL DPI+Q +RF
Sbjct: 368 VTG---PVWLVNTPKFISPLAKSNVDNPLAVERFQPVIAGTELGNGYSELNDPIDQLNRF 424

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++   +    +E   +D DF+  L   MP + G     +R+     G     E +  P 
Sbjct: 425 TEQQAMRDAGDDEAMMLDIDFVEMLEYGMPPTCGWGYS-ERVFWTFEGVTA-REGVPFPH 482

Query: 348 SQSNQEE 354
            +   +E
Sbjct: 483 LKHEIDE 489


>gi|311695403|gb|ADP98276.1| tRNA synthetase, class II (D, K and N) [marine bacterium HP15]
          Length = 322

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 160/349 (45%), Gaps = 29/349 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +P W        +  L  R    S +R +F +   +E+++  L      + ++    
Sbjct: 1   MTREPVWQPSA---SQAALKSRAQQLSFVRGFFAKRGVLEVETPVLGRCGVTDVNLD--G 55

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
               +    R   +LQTSPE+  K+LLAAG   IF  +  +RNGEQG  H PEF+MLEWY
Sbjct: 56  IPAQVSAGTRTGGWLQTSPEYHMKRLLAAGCGSIFQISRVFRNGEQGRRHNPEFSMLEWY 115

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           R       LM +  +++                        PE I   +A  R+A+ID  
Sbjct: 116 RTGFDDVTLMAEVSDLVCGWLGC----------------ERPEIIQYRDALRRWAHIDPF 159

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                    DR L+    +        D         ++   +EPNLG      +  YPA
Sbjct: 160 AA------TDRELMRRCEEWLEPEQLADLGRDGCLDLLMSFAVEPNLGRRRPVFITGYPA 213

Query: 244 PESALANIYPAD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
            +++LA +  +D      RFELY   +ELCN   EL DP EQR RFE + + +++     
Sbjct: 214 SQASLARVSKSDGYETAHRFELYVDGLELCNGYWELTDPGEQRLRFEADNELRRRSGKPE 273

Query: 303 YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +DE FLA L   +P+ SG+A+G DRL+ML  G  +I EV+  PF ++
Sbjct: 274 MGLDEAFLAALDQGLPECSGVALGLDRLLMLKLGVQDIREVLAFPFERA 322


>gi|296414834|ref|XP_002837102.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295632952|emb|CAZ81293.1| unnamed protein product [Tuber melanosporum]
          Length = 500

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 80/357 (22%), Positives = 141/357 (39%), Gaps = 27/357 (7%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +   R R             L  R+ I   +R++F+   F+E+ +  L  + G     
Sbjct: 128 DLETRLRNRHVDLMVRPVAGQILRLRSHIIQHIRDFFISRDFVEVQTPILSDTFGGAV-A 186

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           + F TE        K L L+ +PE   K+L+  G +++F     +RN      H PEFT 
Sbjct: 187 KPFLTEATSVCR-GKQLALRIAPELWLKRLVIGGLDRVFEIGTQFRNEGVDNTHNPEFTT 245

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQ----KIFSFQNVNCNPFSEPEYITVAEAFA 175
            E+Y+A+   E ++     ++   A   ++    K+     +  +  +  + +    A  
Sbjct: 246 CEFYQAYAGLEDIINTTEELLSGMARKVSELKARKLKDIPEIETDFTAPFQRLEFIPALE 305

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
                 L     N +     LL L  +   +      T   +  ++  E +EP       
Sbjct: 306 ASMGHKLPVLHGNTEAVTLELLSLF-KTLSLPTPPMTTIPRLLQKLSSEYLEPQC--MKP 362

Query: 236 TILDRYPAPESALANIYPAD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
           T +  +P   S L+        R + R EL+    EL NA +E   P EQR +F  +   
Sbjct: 363 TFITNHPETLSPLSKTSLLHGQRVSSRVELFVDGKELVNAYEEENSPTEQRRKFVMQAGW 422

Query: 295 K-----KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           K     ++  +    +DE +   L   +P + G  +G DRLVM+  GA  I +V+  
Sbjct: 423 KDEDVIERGEDGEGVVDEAYCQALEWGLPPTGGWGIGIDRLVMVFAGAERIADVLAF 479


>gi|29655104|ref|NP_820796.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|153206255|ref|ZP_01945518.1| lysyl-tRNA synthetase homolog GenX [Coxiella burnetii 'MSU Goat
           Q177']
 gi|161830704|ref|YP_001597640.1| lysyl-tRNA synthetase homolog GenX [Coxiella burnetii RSA 331]
 gi|165918240|ref|ZP_02218326.1| lysyl-tRNA synthetase homolog GenX [Coxiella burnetii RSA 334]
 gi|212211847|ref|YP_002302783.1| lysyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212217792|ref|YP_002304579.1| lysyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|29542373|gb|AAO91310.1| lysyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|120577385|gb|EAX34009.1| lysyl-tRNA synthetase homolog GenX [Coxiella burnetii 'MSU Goat
           Q177']
 gi|161762571|gb|ABX78213.1| lysyl-tRNA synthetase homolog GenX [Coxiella burnetii RSA 331]
 gi|165918100|gb|EDR36704.1| lysyl-tRNA synthetase homolog GenX [Coxiella burnetii RSA 334]
 gi|212010257|gb|ACJ17638.1| lysyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212012054|gb|ACJ19434.1| lysyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 321

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 98/330 (29%), Positives = 161/330 (48%), Gaps = 26/330 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
             R  +   +R++F E + +E+++  L      + HI +F T  +     ++  YLQTSP
Sbjct: 16  RLRAQLLRDIRQFFAERKVMEVETPILSQHTVTDIHIDSFQTTYL-NGKEKQHYYLQTSP 74

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
           E++ K+LL+AG   I+    A+RNGE G  H PEF+MLEWYR   S   LM +   +++ 
Sbjct: 75  EYAMKRLLSAGSGPIYQICKAFRNGESGSQHNPEFSMLEWYRPDFSCHDLMDEMDELLQF 134

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
             +                  +   IT  E F ++  I       NP Q   H L   A 
Sbjct: 135 ILQ----------------SKKASRITYEELFLKHLGI-------NPHQISLHQLQSLAN 171

Query: 203 QAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           Q  +  + +    + +   +  E +EP +G +    +  +PA ++AL+ I P DP    R
Sbjct: 172 QFSLENSTEYNDRNTLLQFLFSECLEPKIGFDAPLFVYHFPATQAALSKINPQDPNVALR 231

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           FE+Y   +E  N  +EL +  EQR RF  +  ++ +    +  IDE FLA L   +P  +
Sbjct: 232 FEVYIQGMECANGFEELTNADEQRQRFLNDNTKRNQQNRPSINIDERFLAALIHGLPPCA 291

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           G+A+G DRL+M+      I++VI  P+ ++
Sbjct: 292 GVAVGLDRLIMIKAERKCIDDVINFPWERA 321


>gi|121702897|ref|XP_001269713.1| lysyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119397856|gb|EAW08287.1| lysyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 584

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 15/337 (4%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R+ I   LR++F++  F+E+ +  +    G     R F       +   + L L+
Sbjct: 244 DIIRARSAIIQFLRQFFLDRSFMEVSTPIVGSIAGGAI-ARPF--HTSATEFPDRQLSLR 300

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +++F    ++RN      H PEFT  E+Y A+ + E LM    N+
Sbjct: 301 IAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNPEFTTCEFYHAYANLEDLMSITENL 360

Query: 140 IRCAAEVANQ--KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +   A    +  K  +      +  +    +                 LD PD  D   +
Sbjct: 361 LSGMAAHIQEFNKNATLSPPEVDFSTPFRRVDFTTGIEEKIGRK-LPDLDAPDALD--QV 417

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPAD 255
                   I +  + T   +   +    +EP       T +   P   S    + I+PA+
Sbjct: 418 KQLFIDLSISIPENPTLPRLLDELCGTYLEPEC--INPTFIINPPECLSPLSKSFIHPAN 475

Query: 256 P-RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
             R   R EL+    E+ N  +E   P EQR +FE +++  K        +DE +L  L 
Sbjct: 476 QQRVAARAELFIEGREMVNTYEEENSPFEQRRKFEDQVRYSKAADESA-EVDESYLEALE 534

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +P + G   G DRL ML TGA  I +V+     ++
Sbjct: 535 WGLPSTGGWGCGIDRLCMLFTGAKRIGDVLPFGNLRA 571


>gi|156054929|ref|XP_001593389.1| hypothetical protein SS1G_06311 [Sclerotinia sclerotiorum 1980]
 gi|154704091|gb|EDO03830.1| hypothetical protein SS1G_06311 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 459

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 84/375 (22%), Positives = 155/375 (41%), Gaps = 33/375 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +  +P +   + +   R R             L  R+ I   +R++ V++ F+E  +  L
Sbjct: 75  LAPVP-RKLEDPETRIRNRHLDLLVNNDVAATLRLRSKITQHIRDFLVQDNFLEFQTPIL 133

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
                     + F T     +   K L L+ +PE   K+L+  G +++F    A+RN   
Sbjct: 134 ADKASGAM-AQPFKT--NATEFPEKELALRIAPELWLKRLVIGGLDRVFEIGPAFRNEGL 190

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFT  E+Y+A+   E L+    N+I     + N      Q+V   PF+E     
Sbjct: 191 DATHNPEFTTCEFYKAYADIEDLISMTENLISGLVYLVNGLRVDPQHVKYMPFTELPRFE 250

Query: 170 VAEAFARYANIDLGTTLDNPDQPDR---------HLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  +  I+    +++  +              L    ++  + V  + T   +  +
Sbjct: 251 EDLYTKPFKRIEFIPAIESAIEEKLPDLQKDDAGEDLLQLFRKYDLEVPENPTLPRLLDK 310

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF----TKRFELYACNIELCNACD 276
           +    IEP       T +   P+  + L +    DP      + R EL+  + E+ N  +
Sbjct: 311 LASIYIEPLCSD--PTFIMHQPSCMAPL-SKSFLDPTTKQLVSARVELFIQHQEIANMYE 367

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           E   P EQR++F ++++ K  I N    +DE ++  L   +P + G   G DRLVM ++G
Sbjct: 368 EENSPFEQRYKFGEQLKFKD-IENPMDKVDEGYIQALEVGLPPTGGWGCGVDRLVMWLSG 426

Query: 336 ANNINEVIWTPFSQS 350
           A  I++V+     ++
Sbjct: 427 AKRISDVLPFGSLRN 441


>gi|219871220|ref|YP_002475595.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691424|gb|ACL32647.1| lysyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 301

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 158/324 (48%), Gaps = 25/324 (7%)

Query: 29  QSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQTSPEFSCK 87
            + +R++F E   +E+++ ++      + H+  FST+ +       K L+L TSPE+  K
Sbjct: 1   MAEIRQFFTERGVLEVETPAMSEFSVTDVHLSTFSTQFLSPFSSQAKTLHLITSPEYHMK 60

Query: 88  KLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
           +LLA G   IF     +RN E    H PEFTMLEWYR H    +L+ +  ++++   +  
Sbjct: 61  RLLACGSGAIFQLCRVFRNEEVSKRHNPEFTMLEWYRPHFDMYRLINEVDDLLQQILDCE 120

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
             + FS+Q V                F  Y  +D       P    +  L  +A++ G++
Sbjct: 121 PAESFSYQFV----------------FQTYVGLD-------PLSATKAQLVAKAREHGLQ 157

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
              D+    +   +  E +E N+G    T +  +PA ++ALA I   D R  +RFE Y  
Sbjct: 158 CDEDEQRDTLLQFLFSEVVEANIGKERPTAVYHFPATQAALAQISTEDHRVAERFEFYYK 217

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGF 326
            +EL N   EL D  EQ  RFE++   ++ +      +D  FL  L   MP  SG+A+G 
Sbjct: 218 GLELANGFHELSDAKEQIRRFEQDNVLREAMGLPPQQLDRRFLEALKAGMPNCSGVALGV 277

Query: 327 DRLVMLVTGANNINEVIWTPFSQS 350
           DRL+M+   A++I++V+     ++
Sbjct: 278 DRLMMIAMNADSIDQVMAFGVERA 301


>gi|156102184|ref|XP_001616785.1| lysine-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148805659|gb|EDL47058.1| lysine-tRNA ligase, putative [Plasmodium vivax]
          Length = 677

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 88/421 (20%), Positives = 161/421 (38%), Gaps = 84/421 (19%)

Query: 1   MHQIPSQPWWNRDFH--YRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R             ++ R  +   +R+  +  ++IE+D+ 
Sbjct: 271 LLPLPDKYKGMKDVEFKYRKRYLDFLINKEEKEKIITRFAVIQEIRKLLLRKKYIEVDTP 330

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKK-LLAAGEEKIFCFAHAWRN 106
            LQ  PG  +  + F T L     +   LYL+ +PE   KK +++   E+IF F+  +RN
Sbjct: 331 ILQSIPGGAS-AKPFETFLKS---LNLVLYLRIAPELFLKKLIISGISEQIFEFSKCFRN 386

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                +H PEFT+LE Y+A+ +Y+ ++K    +I+   +     + S  +         +
Sbjct: 387 EGLSTIHNPEFTLLEIYKAYSNYKYMIKFVERLIKKVLKKF--TLRSTVHNGLPYQKRWK 444

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD---TWSDIFSRILI 223
            I+  +    Y  +D                Y +A++  +          W  I   +  
Sbjct: 445 KISFIKIVKDYTCVDFLK-------LSFEEAYNEAKKLNVTFDQGKEYLNWGLIVQEVFK 497

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
            K+EP    N    +   PA  S LA     + R ++RFE Y   +E+ N   E  + + 
Sbjct: 498 RKVEP-FLENHPIHIYHLPADTSPLAKTLRKNERLSERFETYIGKMEIANGYSEEANSLM 556

Query: 284 QRHRFEKEMQEKKKI----------------------------------YNE-------- 301
           Q  +F  +   K K                                     E        
Sbjct: 557 QERKFISQCALKNKNVEHCNVCCSDRFAPTDDVHSGAYRGYPNQVSAPSGEESPKGSEQI 616

Query: 302 ----------TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                     ++ ID D++  L   +P + G+ +G DRL ML+T +++I  V+  P  + 
Sbjct: 617 SSKIQHVQNDSHEIDYDYVTALAHGLPPTGGLGIGIDRLCMLLTNSSSIKNVLPFPIIKP 676

Query: 351 N 351
            
Sbjct: 677 Q 677


>gi|241957335|ref|XP_002421387.1| lysine--tRNA ligase, putative; mitochondrial lysyl-tRNA synthetase,
           putative [Candida dubliniensis CD36]
 gi|223644731|emb|CAX40722.1| lysine--tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 535

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 70/338 (20%), Positives = 138/338 (40%), Gaps = 26/338 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            +   +  ++ ++ +  ++R + ++  F+E+ +  L    G   +   F T+        
Sbjct: 209 VNPDSKNAIIVKSKVIQAIRNFLLDRDFLEVQTPILSGQ-GTGANATPFVTKFK-----G 262

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
            P++L+ +PE   KKL+  G +++F     +RN      H PEF+  E+Y+A+ S ++LM
Sbjct: 263 DPVHLRVAPELWLKKLVIGGFDRVFEIGSNFRNEGIDMTHNPEFSTCEFYQAYTSLDELM 322

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           K   ++                      F + E++   E        D            
Sbjct: 323 KMTEDMFGYVFAKLG----VTNKFPVGNFPKYEFLPTIEQKTGIPITD----------LT 368

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY--PAPESA--LA 249
              L    ++  + +  +     + + +    +E     +  T +  Y  P   S    +
Sbjct: 369 LDGLVNYYKKMNLTIPPNPNPVKLLNNLSERYLESICSEHPNTPVFIYNQPEIMSPLAKS 428

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI-DED 308
               A  R + RFEL+    E+ NA +E  DP +Q  +F+ + Q K    ++   I D +
Sbjct: 429 TTDAAGNRISSRFELFINAREMANAYEEENDPCKQLEKFKLQQQMKTAYNDQEMLIPDHN 488

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           ++  +   +P + G   G DRL ML+ GAN I +V+  
Sbjct: 489 YVRAMEYGLPPTGGWGCGIDRLAMLIAGANRIEDVLTF 526


>gi|109896771|ref|YP_660026.1| lysyl-tRNA synthetase-related protein GenX [Pseudoalteromonas
           atlantica T6c]
 gi|109699052|gb|ABG38972.1| lysyl-tRNA synthetase-related protein GenX [Pseudoalteromonas
           atlantica T6c]
          Length = 327

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 108/349 (30%), Positives = 166/349 (47%), Gaps = 31/349 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           M   P  P W           L +R  I +++R++F +    E+++ SL  +  ++ H+R
Sbjct: 1   MKPEP-SPCWQPTADV---ATLKQRAAIITNIRQFFAQRDVWEVETPSLSNATVSDVHMR 56

Query: 61  AFSTELIIQDHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
            F T+ +     ++  LYLQTSPE++ K+LL AG   IF  A A+RN E G  H PEFTM
Sbjct: 57  VFDTQFVDPMSPQQRTLYLQTSPEYAMKRLLCAGSGAIFQIAKAFRNEEAGKHHNPEFTM 116

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           LEWYR    + QLM +   +++                        + ++  +AF +Y  
Sbjct: 117 LEWYRPGFDHNQLMDELDELMQSVVGCL----------------PAKRMSYQDAFIQYLA 160

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
           ID       P       L  +  + G       +     I   +   ++EP++       
Sbjct: 161 ID-------PLSAPLSALQTKGCELGYEHICRDEQDKDTILQLLFSHEVEPHIANKSPCF 213

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  +PA ++ALA +   D R  +RFELY   +EL N   EL +  EQR RFE++ Q++K 
Sbjct: 214 IFDFPASQAALARVSVQDERVAERFELYYKGLELANGFHELANAPEQRQRFERDNQQRKS 273

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               T PIDE FL  L   +P  SG+A+G DRLVML    ++I  V+  
Sbjct: 274 AGLSTVPIDELFLDALDAGLPDCSGVAVGVDRLVMLALEKSDIQHVLAF 322


>gi|320540950|ref|ZP_08040431.1| putative predicted lysyl-tRNA synthetase [Serratia symbiotica str.
           Tucson]
 gi|320028987|gb|EFW11185.1| putative predicted lysyl-tRNA synthetase [Serratia symbiotica str.
           Tucson]
          Length = 301

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 158/319 (49%), Gaps = 27/319 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK-PLYLQT 80
           LLKR  I + +R +F +   +E+++ ++  +   + H+  F T  +         LY+ T
Sbjct: 6   LLKRAAILAEIRRFFADRGVLEVETPTMSQATVTDIHLFPFQTRFVGPGAADSLTLYMMT 65

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H    +LM +  +++
Sbjct: 66  SPEYHMKRLLAAGSGSIYQLGRSFRNEEAGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLL 125

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   + A+ +                 ++  +AF R+ +ID       P   ++  L   
Sbjct: 126 QQVLDCASAET----------------LSYQQAFLRHLDID-------PLSAEKAQLREV 162

Query: 201 AQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           A +  +    D  +    +   +    +EP +G      +  +PA ++ALA I   D R 
Sbjct: 163 AAKLDLSNVADSEEDRDTLLQLLFTIGVEPLIGREKPAFVYHFPASQAALAEISTEDHRV 222

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFE+Y   IEL N   EL D  EQR RFE++ +++ +     +PID + L  L   +P
Sbjct: 223 AERFEVYFKGIELANGFRELTDGSEQRQRFEQDNRKRAQRGLPQHPIDNNLLDALQHGIP 282

Query: 318 QSSGIAMGFDRLVMLVTGA 336
             SG+A+G DRLVML  GA
Sbjct: 283 ACSGVALGVDRLVMLALGA 301


>gi|67516293|ref|XP_658032.1| hypothetical protein AN0428.2 [Aspergillus nidulans FGSC A4]
 gi|40747371|gb|EAA66527.1| hypothetical protein AN0428.2 [Aspergillus nidulans FGSC A4]
 gi|259489326|tpe|CBF89504.1| TPA: lysyl-tRNA synthetase, hypothetical protein (Eurofung)
           [Aspergillus nidulans FGSC A4]
          Length = 527

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 145/365 (39%), Gaps = 32/365 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +H IP     + +  Y R             +  R++I   +R++ ++  F+E+ +  L 
Sbjct: 166 LHDIPLDAHGHENSPYPRHVQMLGDPATVKVIKSRSLITQHIRQFLLDKSFMEVSTPILN 225

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
             PG  +  R F T         + L L+ +PE   K+L+  G +++F    ++RN    
Sbjct: 226 GIPGGAS-ARPFYTSATEF--PDRQLALRIAPELWLKRLVVGGFDRVFEIGPSFRNEGLD 282

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA---NQKIFSFQNVNCNPFSEPEY 167
             H PEFT  E+Y+A+ + E+LM     ++   A+V      K         +       
Sbjct: 283 KTHNPEFTTCEFYQAYSNLEELMNTTEELLCGLAQVFIAEFNKRKEPPPTAIDFTIPFHR 342

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ---QAGIRVAHDDTWSDIFSRILIE 224
           I           I+LG     PD      L    Q      +++    T   +   +   
Sbjct: 343 IDF------ITGIELGIDRQLPDLTAPDSLEQVTQIFTDLKLQLPEHPTLPRLLDELCSI 396

Query: 225 KIEPNLGINCCTILDRYPAPESALANIY---PADPRFTKRFELYACNIELCNACDELLDP 281
            +EP       T +   P   S L+  +     + R   R EL+    E+ N  +E   P
Sbjct: 397 YVEPQCV--QPTFIINPPECLSPLSKSFVHPDNNQRVAARAELFIEGKEIANMYEEENSP 454

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            EQR +FE +++  K    E   IDE++L  L   +P + G   G DRLVML T    I 
Sbjct: 455 WEQRRKFEDQLKYSKDAN-EPGEIDEEYLRALEWGLPPTGGWGCGIDRLVMLFTKVKKIA 513

Query: 341 EVIWT 345
           EV+  
Sbjct: 514 EVLPF 518


>gi|238883346|gb|EEQ46984.1| hypothetical protein CAWG_05538 [Candida albicans WO-1]
          Length = 535

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/338 (21%), Positives = 141/338 (41%), Gaps = 26/338 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            +   +  ++ ++ +  ++R + ++  F+E+ +  L    G   +   F T+        
Sbjct: 209 VNRDSKDAIIVKSKVIQAIRNFLLDRDFLEVQTPILSGQ-GTGANATPFVTKFK-----G 262

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
           +P++L+ +PE   KKL+  G +K+F     +RN      H PEF   E+Y+A+ S ++LM
Sbjct: 263 EPVHLRVAPELWLKKLVIGGFDKVFEIGSNFRNEGIDMTHNPEFATCEFYQAYTSLDELM 322

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           K   ++     +                F + E++   E     +  D            
Sbjct: 323 KMTEDMFGYVFDKLG----VTDKFPTGNFPKHEFLPTIEQKTGVSITD----------LT 368

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY--PAPESALANI 251
              L    ++  + V  +     + + +    +E     +  T +  Y  P   S LA  
Sbjct: 369 LDGLVNYHKRLDLAVPPNPNPVKLLNNLSEIYLESICSEHPNTPVFIYNQPEIMSPLAKS 428

Query: 252 --YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI-DED 308
               A  R + RFEL+    E+ NA +E  DP +Q  +F+ + + K    ++   I D +
Sbjct: 429 ITDAAGNRISSRFELFINAREMANAYEEENDPCKQLEKFKLQQKMKADYNDQEMLIPDHN 488

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           ++  +   +P + G   G DRL ML+ GAN I +V+  
Sbjct: 489 YVRAMEYGLPPTGGWGCGIDRLAMLIAGANRIEDVLTF 526


>gi|325093000|gb|EGC46310.1| lysyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 567

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 75/338 (22%), Positives = 129/338 (38%), Gaps = 12/338 (3%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ I   +R +F++  F+E+++  L    G     R F T         +PL L+
Sbjct: 230 DILRARSSIIQYIRSFFLDRSFMEVETPILASVAGGAV-ARPFQTSATEF--PDRPLSLR 286

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +K+F    ++RN      H PEFT  E+Y A    E L+    + 
Sbjct: 287 IAPELWLKRLVVGGFDKVFEIGPSFRNEGLDKTHNPEFTTCEFYHAFADLETLITLTESF 346

Query: 140 IRC---AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
                      N+ + +      +  +    +             L      P +     
Sbjct: 347 FTGLDRHIRHLNETLETLSPTTTSFAAPFCRLDFIPDLETAMCHKLPDFTTTPTEEATKT 406

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPA 254
           +    +Q    +  +     +  R+    +EP       T +  +P   S    +  +P 
Sbjct: 407 VIQLFEQLSHPLPTNPNLPRLLDRLSAIYLEPQCRD--PTFIINHPECLSPLSKSFTHPT 464

Query: 255 D-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                  R EL+    E+ N  +E   P EQR +FE ++  +         +DE++L  L
Sbjct: 465 CGQTVAARAELFIDQREVVNMYEEENSPFEQRRKFEIQLGFQVPAVEAEGKMDENYLQAL 524

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              +P + G   G DRL ML TGA  I +V+     +S
Sbjct: 525 QWGLPPTGGWGCGVDRLCMLFTGAKRIGDVLSFGNLRS 562


>gi|90407180|ref|ZP_01215368.1| lysyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311756|gb|EAS39853.1| lysyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 370

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 163/343 (47%), Gaps = 31/343 (9%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W  D +      L KR  I   +R++F++   +E+++ SL  S   + H+  F T  I  
Sbjct: 47  WLPDANIL---LLKKRARIIQGIRQFFIDRDLLEVETPSLSQSGVTDQHLACFKTYFIGP 103

Query: 70  D-------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           +        +  PLYLQTSPEF  K+LL+AG   IF  + A+RN E G  H PEFT+LEW
Sbjct: 104 EISIEKAEPLGTPLYLQTSPEFHMKRLLSAGSGSIFQISKAFRNEESGRYHNPEFTLLEW 163

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR    + QLM++   +++                        + +T   AF +   +D 
Sbjct: 164 YRIDFDHFQLMQEMDQLLQQVLSC----------------EPAKKMTYQHAFMQILQVDP 207

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            +      +     L+L     G  + ++  +  +   +    IEP +       +  +P
Sbjct: 208 LSASLEQLKEAGQSLHL-----GEVLDNEKDFDTVLQLLFCFAIEPVIAQEKPCFIYDFP 262

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A ++ALA I P D R  +RFE+Y   IEL N   EL D  EQ  RFE +   ++      
Sbjct: 263 ASQAALARISPVDKRVAERFEVYYKGIELANGFHELNDSAEQLRRFEHDNCLRRANALPE 322

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            PID  F+A L ++P  +G+A+G DRL+ML T   +I++V+  
Sbjct: 323 MPIDFRFVASLNKLPNCAGVALGIDRLIMLATAQKHIDKVLSF 365


>gi|154295362|ref|XP_001548117.1| hypothetical protein BC1G_13262 [Botryotinia fuckeliana B05.10]
 gi|150844129|gb|EDN19322.1| hypothetical protein BC1G_13262 [Botryotinia fuckeliana B05.10]
          Length = 423

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 81/369 (21%), Positives = 150/369 (40%), Gaps = 31/369 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +  +P +   + +   R R             L  R+ I   +R++ V++ F+E  +  L
Sbjct: 45  LAPVPQK-LEDPESRIRNRHLDLLVNNDVAATLRLRSKITQHIRDFLVQDDFLEFQTPIL 103

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
                     + F T     +   K L L+ +PE   K+L+  G +++F    A+RN   
Sbjct: 104 ADQASGAM-AQPFKT--NATEFPEKQLALRIAPELWLKRLVIGGLDRVFEIGPAFRNEGL 160

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
             +H PEFT  E+Y+A+   E L+     +I     + N      Q V   PF+E     
Sbjct: 161 DAIHNPEFTTCEFYKAYADLEDLISMTEKLISGLVRLVNGLRDDPQQVKYMPFAELPRFE 220

Query: 170 VAEAFARYANIDLGTTL---------DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
                  +  I+    +         D      R  L     +  + V  + T   +   
Sbjct: 221 EDLYTKPFKRIEFIPAVEAALGEKLPDLQKDDARKDLLEIFTRHSLEVPENPTLPRLLDE 280

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIY---PADPRFTKRFELYACNIELCNACDE 277
           +    IEP+      T +  +P+  + L+  +     +   + R EL+  + E+ N  +E
Sbjct: 281 LASLYIEPHCSE--PTFIMHHPSSMAPLSKSFLDPKTNQLVSARVELFIQHQEIANMYEE 338

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
              P EQ ++F ++++ K  I N    +DE ++  L   +P + G   G DRLVM ++G+
Sbjct: 339 ENSPFEQSYKFREQLRYKD-IENPINKVDEGYIQALEVGLPPTGGWGCGVDRLVMWLSGS 397

Query: 337 NNINEVIWT 345
             I++V+  
Sbjct: 398 KRISDVLPF 406


>gi|88812698|ref|ZP_01127945.1| Lysyl-tRNA synthetase-related protein [Nitrococcus mobilis Nb-231]
 gi|88790114|gb|EAR21234.1| Lysyl-tRNA synthetase-related protein [Nitrococcus mobilis Nb-231]
          Length = 323

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 160/343 (46%), Gaps = 26/343 (7%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W        R  L +R  I +++R +F E   +E+D+  L  +   + ++ +F       
Sbjct: 5   WRPSAC---RKALRQRASILAAIRGFFAERGVLEVDTPCLVGAGATDPNVPSFYVAYDGP 61

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
               +  L+LQ+SPE + K+LLAAG   I+   HA+R GE+G LH PEFT+LEWYR    
Sbjct: 62  GAPPEGRLWLQSSPEHAMKRLLAAGSGAIYQITHAFRAGERGRLHNPEFTLLEWYRLGWD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
              LM +  ++ R                        E +T  + F  +  +D       
Sbjct: 122 QHALMDEVADLFRYLLGGCT----------------VERLTYTQVFHAHLGVDPLEASRQ 165

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
             +     L       G           +   +L  ++ P LG    T +  +PA ++AL
Sbjct: 166 TLETSAGGL-----GLGRAALAALDRDGLLDLLLSHRVVPALGSGRLTFVYDFPASQAAL 220

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A + P DPR  +RFEL++  +EL N   EL D +EQR RFE+E   + ++      +D  
Sbjct: 221 ARLRPDDPRVAERFELFSNGVELANGYHELTDAVEQRLRFERERAARARLGLPLPDVDAR 280

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            LA +   +P  +G+A+G DRL+M V GA +I+EVI  P  ++
Sbjct: 281 LLAAMEAGLPPCAGVALGLDRLIMHVCGARHIDEVIAFPIERA 323


>gi|124808534|ref|XP_001348339.1| lysine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23497231|gb|AAN36778.1| lysine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 674

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 95/426 (22%), Positives = 162/426 (38%), Gaps = 84/426 (19%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D  Y+ R               +  R  I   +R+Y ++  F+E+D+ 
Sbjct: 261 LLPLPDKYKGMKDVEYKYRKRYLDFLTNNDQKDKIKARYDIIQEIRKYLLKRNFLEVDTP 320

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLL-AAGEEKIFCFAHAWRN 106
            LQ  PG  T  + F T L     +   LYL+ SPE   KKL+ +   E+IF  +  +RN
Sbjct: 321 ILQLIPGGAT-AKPFETYLKS---LNLILYLRISPELFLKKLIVSGISEQIFELSKCFRN 376

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA--------NQKIFSFQNVN 158
                +H PEFTMLE Y+++ +Y+ +M     II+   +          +      +  N
Sbjct: 377 EGLSSIHNPEFTMLEIYKSYTNYKYMMNFVEKIIKHLFKKFPYPSNINSSNSNTKEKKEN 436

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD---TWS 215
            N  ++ + I+  +    Y +I+                Y +A +  I          W 
Sbjct: 437 ININNKWKKISFIKILKDYTSINFLK-------LSFDEAYDEANKLNIHFDQPKEQLNWG 489

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            I   +  +K+EP L      I    P+  S LA     + R ++RFE Y   +E+ N  
Sbjct: 490 LIVEEVFKKKVEPYLPHEPIHI-YHLPSDTSPLAKTLNKNSRLSERFETYIGQMEIANGY 548

Query: 276 DELLDPIEQRHRFEKEMQEKKK-------------------------------------- 297
            E  + + Q  +F  +   K                                        
Sbjct: 549 SEEANALIQEKKFLSQFALKNMIKTNEKNMGIPTTFSYDQYKSNHNETDQSIKEVPNKDN 608

Query: 298 ---IYNE-----TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              IY+E        ID D++  L   +P + G+ +G DRL ML T  N I  ++  P  
Sbjct: 609 TTNIYDENNKSDNNQIDYDYVTALAHGLPPTGGLGIGIDRLCMLFTNTNTIKNIVSFPII 668

Query: 349 QSNQEE 354
           + + ++
Sbjct: 669 KPHGKD 674


>gi|68469168|ref|XP_721371.1| hypothetical protein CaO19.6533 [Candida albicans SC5314]
 gi|68470193|ref|XP_720858.1| hypothetical protein CaO19.13886 [Candida albicans SC5314]
 gi|77022726|ref|XP_888807.1| hypothetical protein CaO19_6533 [Candida albicans SC5314]
 gi|46442748|gb|EAL02035.1| hypothetical protein CaO19.13886 [Candida albicans SC5314]
 gi|46443286|gb|EAL02569.1| hypothetical protein CaO19.6533 [Candida albicans SC5314]
 gi|76573620|dbj|BAE44704.1| hypothetical protein [Candida albicans]
          Length = 535

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 73/338 (21%), Positives = 141/338 (41%), Gaps = 26/338 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            +   +  ++ ++ +  ++R + ++  F+E+ +  L    G   +   F T+        
Sbjct: 209 VNRDSKDAIIVKSKVIQAIRNFLLDRDFLEVQTPILSGQ-GTGANATPFVTKFK-----G 262

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
           +P++L+ +PE   KKL+  G +K+F     +RN      H PEF   E+Y+A+ S ++LM
Sbjct: 263 EPVHLRVAPELWLKKLVIGGFDKVFEIGSNFRNEGIDMTHNPEFATCEFYQAYTSLDELM 322

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           K   ++     +                F + E++   E     +  D            
Sbjct: 323 KMTEDMFGYVFDKLG----VTDKFPTGNFPKYEFLPTIEQKTGVSITD----------LT 368

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY--PAPESALANI 251
              L    ++  + V  +     + + +    +E     +  T +  Y  P   S LA  
Sbjct: 369 LDGLVNYHKRLDLAVPPNPNPVKLLNNLSEIYLESICSEHPNTPVFIYNQPEIMSPLAKS 428

Query: 252 --YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI-DED 308
               A  R + RFEL+    E+ NA +E  DP +Q  +F+ + + K    ++   I D +
Sbjct: 429 ITDAAGNRISSRFELFINAREMANAYEEENDPCKQLEKFKLQQKMKADYNDQEMLIPDHN 488

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           ++  +   +P + G   G DRL ML+ GAN I +V+  
Sbjct: 489 YVWAMEYGLPPTGGWGCGIDRLAMLIAGANRIEDVLTF 526


>gi|171694880|ref|XP_001912364.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947682|emb|CAP59844.1| unnamed protein product [Podospora anserina S mat+]
          Length = 559

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 77/350 (22%), Positives = 133/350 (38%), Gaps = 18/350 (5%)

Query: 9   WWNRDFHYRRRPF--LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
             + D    RR    L  R+ I   LR++F E  F+E  +  L  + G     R F+   
Sbjct: 187 HRHIDMLANRRTVDTLRLRSYITRYLRDFFHERNFLEFQTPILSGNAGGAV-ARPFTMHA 245

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
              + + K + L+ +PE   K+L+  G +++F    A+RN      H PEFT+ E+Y A+
Sbjct: 246 ---EAVSKDVTLRIAPELWLKRLVVGGVDRVFELGPAFRNEGIDQTHNPEFTICEFYHAY 302

Query: 127 ESYEQLMKDCMNIIRCAAEVANQ-------KIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
            + + L+    ++IR  AE   +             +         +             
Sbjct: 303 ANLQDLITITQDLIRGVAEHCAKLISNGTLSSLPEISDLSIYQQPFQQAEFIPTLQDKLG 362

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        D   L                   +  ++    IEP         + 
Sbjct: 363 FTFPDLTTPSAHSDLLSLLNSNSVPPFEGQDHFPLPKLLDKLAERYIEPLSLTTPL-FIT 421

Query: 240 RYPAPESALANIY---PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            +P   S L+  +     +   + R EL+    EL N  +E  DP  QR +F +++++K 
Sbjct: 422 HHPVVMSPLSKSFLCPKTNQHVSARTELFVKGKELANMYEEENDPFAQREKFAEQIRQKD 481

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               +   +DE F   L + +P + G   G +RLVML+ G   I+EV+  
Sbjct: 482 VEEGQKVEVDESFCYALASGLPPTGGWGCGVERLVMLMAGTGRISEVLSF 531


>gi|134054891|emb|CAK36903.1| unnamed protein product [Aspergillus niger]
          Length = 585

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 132/339 (38%), Gaps = 19/339 (5%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R+ +   LR++FV+  F+E+++  ++   G     R F       +   + L L+
Sbjct: 229 NVIRARSAVVQYLRQFFVDRAFMEVNTPIIEAVAGGAI-ARPF--HTTATEFPDRQLSLR 285

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE---SYEQLMKDC 136
            +PE   K+L+  G +++F    ++RN      H PEFT  E+Y A+          +  
Sbjct: 286 IAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNPEFTTCEFYHAYANLEDLMTTTEQL 345

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD--- 193
           ++ +       +Q     +    +      ++  +  F R   I           PD   
Sbjct: 346 LSGLAEHLTAFHQSSPFKRPNQEDTPLPFSHLNFSAPFRRLDFITSIEQSIGQKLPDLAS 405

Query: 194 ---RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--L 248
                 +    +     +    T   +   +    +EP       T +   P   S    
Sbjct: 406 PDALEQVKAIFRDRNHALPDKVTLPRLLDELCSIYVEPQCID--PTFIVNPPECLSPLSK 463

Query: 249 ANIYP-ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           + I+P  + R   R EL+    E+ N  +E   P EQR +FE +++  K+   E   IDE
Sbjct: 464 SFIHPTTNQRVAARGELFIEGREVVNTYEEENSPFEQRRKFEDQVRYSKQAD-EAEEIDE 522

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            +L  L   +P + G   G DRL ML TG   I +++  
Sbjct: 523 SYLKALEWGLPPTGGWGCGIDRLCMLFTGMTRIGDILPF 561


>gi|332304893|ref|YP_004432744.1| lysyl-tRNA synthetase-related protein GenX [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172222|gb|AEE21476.1| lysyl-tRNA synthetase-related protein GenX [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 335

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 163/348 (46%), Gaps = 32/348 (9%)

Query: 4   IPSQPW--WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
           +P +P   W           L +R  I + +R++F +   +E+++  L  +  ++ H+R 
Sbjct: 9   MPYEPSNDWQPTADI---ATLKQRANIIADIRQFFAQRNVMEVETPQLSNASVSDFHMRV 65

Query: 62  FSTELIIQDHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F TE         + +YLQTSPE++ K+LL AG   I+  A A+RN E G  H PEFTML
Sbjct: 66  FETEFNDPTSPHARTMYLQTSPEYAMKRLLCAGSGPIYQIAKAFRNEEAGKHHNPEFTML 125

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           EWYR   ++ QLM +  ++++                      + + ++   AF  Y +I
Sbjct: 126 EWYRPDFNHSQLMDELDDLMQ----------------QVVGCEKAQRMSYQAAFILYLSI 169

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
           D       P       L  +  + G      H+     I   +   +IEP +       +
Sbjct: 170 D-------PLTASLSALQQKGSELGYEHICQHELDRDTILQLLFSHEIEPKIANERPCFI 222

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           D +PA ++ALA I   D R  +RFELY   IEL N   EL    EQR RF  +   +K  
Sbjct: 223 DGFPASQAALARICKEDERVAERFELYFKGIELANGFHELAHVEEQRQRFNADNSLRKNN 282

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
              +  IDE FL+ L   +P  +G+A+G DRLVML     NI++V+  
Sbjct: 283 DLPSVAIDELFLSALEVGLPDCAGVAVGIDRLVMLALDKPNISQVLAF 330


>gi|225563051|gb|EEH11330.1| lysyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 545

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 75/338 (22%), Positives = 129/338 (38%), Gaps = 12/338 (3%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ I   +R +F++  F+E+++  L    G     R F T         +PL L+
Sbjct: 208 DILRARSSIIQYIRIFFLDRSFMEVETPILASVAGGAV-ARPFQTSATEF--PDRPLSLR 264

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +K+F    ++RN      H PEFT  E+Y A    E L+    + 
Sbjct: 265 IAPELWLKRLVVGGFDKVFEIGPSFRNEGLDKTHNPEFTTCEFYHAFADLETLITLTESF 324

Query: 140 IRC---AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
                      N+ + +      +  +    +             L      P +     
Sbjct: 325 FTGLDRHIRHLNETLETLSPTATSFAAPFRRLDFIPDLETAMCHKLPDFTTTPTEEATKT 384

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPA 254
           +    +Q    +  +     +  R+    +EP       T +  +P   S    +  +P 
Sbjct: 385 VIQLFEQLSHPLPTNPNLPRLLDRLSAIYLEPQCRD--PTFIINHPECLSPLSKSFTHPT 442

Query: 255 D-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                  R EL+    E+ N  +E   P EQR +FE ++  +         +DE++L  L
Sbjct: 443 CGQTVAARAELFIDQREVVNMYEEENSPFEQRRKFEIQLGFQVPAVEAEGKMDENYLQAL 502

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              +P + G   G DRL ML TGA  I +V+     +S
Sbjct: 503 QWGLPPTGGWGCGVDRLCMLFTGAKRIGDVLSFGNLRS 540


>gi|254482632|ref|ZP_05095870.1| tRNA synthetase class II (D, K and N) subfamily protein [marine
           gamma proteobacterium HTCC2148]
 gi|214036991|gb|EEB77660.1| tRNA synthetase class II (D, K and N) subfamily protein [marine
           gamma proteobacterium HTCC2148]
          Length = 317

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 161/342 (47%), Gaps = 30/342 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P L  R  +  S+RE+F     +E+++  L  +   +  I     E    
Sbjct: 3   WQPSADL---PMLRARAALLDSVREFFAARHVLEVETPLLCSAGVTDPAIEPLIVERGSS 59

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
             +  P YLQTSPE++ K+LLAAG   I+    A+R+GE G  H PEFT+LEWYR    Y
Sbjct: 60  --LHSPHYLQTSPEYAMKRLLAAGSGPIYQLTKAFRDGEAGVRHNPEFTLLEWYRPDHDY 117

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            QLM++   ++                         +YIT  + F     +D  T     
Sbjct: 118 HQLMREVAELVCSCLGE----------------KPVQYITYRDLFLAELGLDPLTAS--- 158

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
              D  L   Q    G      D W D+    +   IEP L       +  YPA ++AL+
Sbjct: 159 -LADLRLRAQQELDLGSLDGDKDLWLDLL---MSHLIEPRLAARGLCFVYDYPASQAALS 214

Query: 250 NIYPADPRFT-KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           NI   D +   +RFELY   +EL N   EL DP EQR RF+ +   ++    +  P+DE 
Sbjct: 215 NIVEKDGQLLGQRFELYVDGLELANGYSELTDPAEQRRRFQADNTRRRDTGFDEKPVDER 274

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            LA L   MPQ SG+A+GFDRL+ML+TG+ +I +V+   +++
Sbjct: 275 LLAALEAGMPQCSGVALGFDRLLMLLTGSEDIRQVLAFDWAR 316


>gi|114327752|ref|YP_744909.1| lysyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114315926|gb|ABI61986.1| lysyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 341

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 140/342 (40%), Positives = 195/342 (57%), Gaps = 14/342 (4%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           ++P W+ D    R PFL +R  +  ++R +F    ++E+++     +PG E H++AF TE
Sbjct: 11  ARPTWHPDRFADRLPFLHRRAALARAVRAFFEARSYLEVETPCAVLAPGEEVHLQAFRTE 70

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            I  D +  PL+L TSPEF+ K+LL AG   IF  A  WRNGE    H  EFTMLEWYR 
Sbjct: 71  RIGVDGVVTPLWLHTSPEFAMKRLLVAGAGPIFQMARVWRNGEGSARHAAEFTMLEWYRP 130

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             S   L+ + M ++                +      EPE +TVAEAF RY   D+  T
Sbjct: 131 GSSMTDLIAETMELLCSVLPPVVSSGGVITRIE-----EPEILTVAEAFTRYTGADVLAT 185

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
            DN            ++ AG+R+   + W D+F R+L+++IEP+LG    T L  +P  +
Sbjct: 186 ADN--------APALSEAAGVRLREGEGWEDLFFRLLLDRIEPHLGRERPTFLTHWPVAQ 237

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA   P DPR  +RFEL+ C IEL NA  EL D  EQR RF  +   ++ +  +T+P+
Sbjct: 238 AALARPCPNDPRVAERFELFVCGIELANAFVELTDAEEQRRRFLIDRSRRQALGGQTWPL 297

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           DEDFLA L   MPQ++GIAMGFDRL ML +GA+ I +V W P
Sbjct: 298 DEDFLAALAFGMPQAAGIAMGFDRLAMLASGADRIQQVQWLP 339


>gi|302507766|ref|XP_003015844.1| hypothetical protein ARB_06156 [Arthroderma benhamiae CBS 112371]
 gi|291179412|gb|EFE35199.1| hypothetical protein ARB_06156 [Arthroderma benhamiae CBS 112371]
          Length = 542

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 75/340 (22%), Positives = 134/340 (39%), Gaps = 20/340 (5%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R++I  S+R +F   +F+E+++  L    G     + F T         +PL L+
Sbjct: 201 NILRARSLITHSMRNFFANREFMEVNTPILASKSGGAI-AQPFVTSATEF--PDRPLSLR 257

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +++F    ++RN      H PEFT  E+Y+A    E L++   ++
Sbjct: 258 IAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNPEFTTCEFYQAFADLESLIETTESL 317

Query: 140 IRCAAEVANQKIFSFQN----VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
           +   A    Q      N       +       +    A             D        
Sbjct: 318 LSTLALEVQQLNKKLNNSLSPTTVSFTGPYRRVDFIPAIEEAIG---RKLPDLQSDNALS 374

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            +        + +   +T   +  ++    +E    +   T +  +P   S L+  Y   
Sbjct: 375 QVKEIFANLSLPLPAHETLPRLLDKLCSTYVESQ--LIEPTFIMNHPECMSPLSKSYRHP 432

Query: 256 PR---FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLA 311
                 + R EL+    E+ N  +E   P EQR +F++++  +     E    +DE +L 
Sbjct: 433 ESGQIVSARAELFVEGKEIMNMYEEENSPFEQRRKFQQQLSFR---DPENAGELDEGYLQ 489

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L   +P + G   G DRL ML TGA  I++V+     +S
Sbjct: 490 TLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLSFGNLRS 529


>gi|317026036|ref|XP_001388795.2| lysyl-tRNA synthetase [Aspergillus niger CBS 513.88]
          Length = 568

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 132/339 (38%), Gaps = 19/339 (5%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R+ +   LR++FV+  F+E+++  ++   G     R F       +   + L L+
Sbjct: 212 NVIRARSAVVQYLRQFFVDRAFMEVNTPIIEAVAGGAI-ARPF--HTTATEFPDRQLSLR 268

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE---SYEQLMKDC 136
            +PE   K+L+  G +++F    ++RN      H PEFT  E+Y A+          +  
Sbjct: 269 IAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNPEFTTCEFYHAYANLEDLMTTTEQL 328

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD--- 193
           ++ +       +Q     +    +      ++  +  F R   I           PD   
Sbjct: 329 LSGLAEHLTAFHQSSPFKRPNQEDTPLPFSHLNFSAPFRRLDFITSIEQSIGQKLPDLAS 388

Query: 194 ---RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--L 248
                 +    +     +    T   +   +    +EP       T +   P   S    
Sbjct: 389 PDALEQVKAIFRDRNHALPDKVTLPRLLDELCSIYVEPQCID--PTFIVNPPECLSPLSK 446

Query: 249 ANIYP-ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           + I+P  + R   R EL+    E+ N  +E   P EQR +FE +++  K+   E   IDE
Sbjct: 447 SFIHPTTNQRVAARGELFIEGREVVNTYEEENSPFEQRRKFEDQVRYSKQAD-EAEEIDE 505

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            +L  L   +P + G   G DRL ML TG   I +++  
Sbjct: 506 SYLKALEWGLPPTGGWGCGIDRLCMLFTGMTRIGDILPF 544


>gi|302660757|ref|XP_003022054.1| hypothetical protein TRV_03795 [Trichophyton verrucosum HKI 0517]
 gi|291185981|gb|EFE41436.1| hypothetical protein TRV_03795 [Trichophyton verrucosum HKI 0517]
          Length = 542

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 75/340 (22%), Positives = 134/340 (39%), Gaps = 20/340 (5%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R++I  S+R +F   +F+E+++  L    G     + F T         +PL L+
Sbjct: 201 NILRARSLITHSMRNFFANREFMEVNTPILASKSGGAI-AQPFVTSATEF--PDRPLSLR 257

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +++F    ++RN      H PEFT  E+Y+A    E L++   ++
Sbjct: 258 IAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNPEFTTCEFYQAFADLESLIETTESL 317

Query: 140 IRCAAEVANQKIFSFQN----VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
           +   A    Q      N       +       +    A             D        
Sbjct: 318 LSTLALEVQQLNKKLNNSLSPTTVSFTGPYRRVDFIPAIEEAIG---RKLPDLQSDNALS 374

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            +        + +   +T   +  ++    +E    +   T +  +P   S L+  Y   
Sbjct: 375 QVKEIFANLSLPLPAHETLPRLLDKLCSTYVESQ--LIEPTFIMNHPECMSPLSKSYRHP 432

Query: 256 PR---FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLA 311
                 + R EL+    E+ N  +E   P EQR +F++++  +     E    +DE +L 
Sbjct: 433 ESGQIVSARAELFVEGKEIMNMYEEENSPFEQRRKFQQQLSFR---DPENAGELDEGYLQ 489

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L   +P + G   G DRL ML TGA  I++V+     +S
Sbjct: 490 TLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLSFGNLRS 529


>gi|309800497|ref|ZP_07694650.1| lysyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308115877|gb|EFO53400.1| lysyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 269

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 75/276 (27%), Positives = 122/276 (44%), Gaps = 9/276 (3%)

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
           + L+ + E   K+L+  G E+++     +RN      H PEFT +E Y+A+  ++ +M  
Sbjct: 1   MVLRIATELHLKRLIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADFQDIMDL 60

Query: 136 CMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
              II+ AA+        ++Q          + + + +A      +D        D    
Sbjct: 61  TEGIIQHAAKSVKGDGPVNYQGTEIKINEPFKRVHMVDAIKEITGVDFWK-----DMTFE 115

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
               + A++      H      I +    E +E    +   T +  +P   S LA   P 
Sbjct: 116 EAKAIAAEKKVPVEKHYTEVGHIINAFFEEFVEET--LIQPTFVYGHPVAVSPLAKKNPE 173

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           D RFT RFEL+    E  NA  EL DPI+Q  RFE + + K+   +E   ID D++  L 
Sbjct: 174 DERFTDRFELFIMTKEYGNAFTELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYIEALE 233

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             MP + G+ +G DRL ML+T    I +V+  P  +
Sbjct: 234 YGMPPTGGLGIGIDRLCMLLTDTTTIRDVLLFPTMK 269


>gi|325928154|ref|ZP_08189363.1| lysyl-tRNA synthetase (class II) [Xanthomonas perforans 91-118]
 gi|325541450|gb|EGD12983.1| lysyl-tRNA synthetase (class II) [Xanthomonas perforans 91-118]
          Length = 320

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 98/332 (29%), Positives = 161/332 (48%), Gaps = 21/332 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL-YL 78
             L  R  + +++R++F E   +E+++  L  +   E +I +FST          PL +L
Sbjct: 9   AALQLRARLNAAIRDFFAERGVLEVETPVLSEAGNTEPNIESFSTRFTGHVDAGAPLRWL 68

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR   +   L ++ + 
Sbjct: 69  RTSPEYPLKRLLAAGLGDCYELGRVFRNGEAGGRHNPEFSMLEWYRVGWNDRSLAQETIE 128

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++R A  +                +  + +T    F +   ID    L +P +  R  L+
Sbjct: 129 LVRRALALVG------------RQARVQVLTYRALFVQALGIDP---LCDPIEMLRAALH 173

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A           T  D    ++  +I+P    +  T++  +PA + ALA I   DP  
Sbjct: 174 DVAID-----PVGLTRDDWLDLLMTHRIQPGFAADTLTVVHDWPASQCALARIRHDDPPV 228

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY  + E+ N   EL D  EQR RF ++   +        P+DE  LA L+++P 
Sbjct: 229 AERFELYLGSFEVANGYHELNDAQEQRARFVRDNAVRAARGLPQLPLDERLLAVLSQLPD 288

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+M + G   I +V+   F+++
Sbjct: 289 CAGVAVGVDRLLMALRGTTQIADVLAFDFARA 320


>gi|86160144|ref|YP_466929.1| tRNA synthetase, class II (D, K and N) [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776655|gb|ABC83492.1| tRNA synthetase, class II (D, K and N) [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 340

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 115/323 (35%), Positives = 177/323 (54%), Gaps = 8/323 (2%)

Query: 28  IQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH-IRKPLYLQTSPEFSC 86
           + + +R       + E+++  L  +PG E HI AF    + +     +PL+LQ SPE++ 
Sbjct: 16  LSAEVRRILGGLGYEEVETPCLVPAPGMEPHIDAFQATFVPEGGGTSRPLWLQNSPEYAM 75

Query: 87  KKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV 146
           K+LLA G E++F  A  +RNGE    H PEFTMLE+YRA   Y  +M D   ++  AA  
Sbjct: 76  KRLLAEGFERVFQLARVFRNGEVSRTHNPEFTMLEFYRAGTDYRGIMADLEALVDGAARA 135

Query: 147 A---NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
                +   +      +  +  E +TVAEAF R+A +D    L+        L       
Sbjct: 136 LLPGGEPRVTRDGRALSLAAPFETLTVAEAFRRHARVD----LEACAGDADRLARAARAA 191

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
                   + + D+F R++++ +EP LG++  T L  +PA  +AL+ +  ADPR+ +RFE
Sbjct: 192 GHDPGPPGEAFDDVFFRVMLDAVEPRLGVDRPTWLVDWPASMAALSKVKAADPRWAERFE 251

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIA 323
           LYA  +EL N   EL D  EQR R  +E   ++++    YP+DE FL  +  MP++ G+A
Sbjct: 252 LYAGGLELANGFTELTDAREQRARLLEEQALRRRLGRPGYPLDEKFLEAVGRMPEAGGVA 311

Query: 324 MGFDRLVMLVTGANNINEVIWTP 346
           +GFDRL+ML+TGA +I EV+  P
Sbjct: 312 VGFDRLLMLLTGAASIEEVLLFP 334


>gi|78047225|ref|YP_363400.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78035655|emb|CAJ23346.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 320

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 98/332 (29%), Positives = 161/332 (48%), Gaps = 21/332 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL-YL 78
             L  R  + +++R++F E   +E+++  L  +   E +I +FST          PL +L
Sbjct: 9   AALQLRARLNATIRDFFAERGVLEVETPVLSEAGNTEPNIESFSTRFTGHVDAGAPLRWL 68

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR   +   L ++ + 
Sbjct: 69  RTSPEYPLKRLLAAGLGDCYELGRVFRNGEAGGRHNPEFSMLEWYRVGWNDRSLAQETIE 128

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++R A  +                +  + +T    F +   ID    L +P +  R  L+
Sbjct: 129 LVRRALALVG------------RQARVQVLTYRALFVQALGIDP---LCDPIETLRAALH 173

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A           T  D    ++  +I+P    +  T++  +PA + ALA I   DP  
Sbjct: 174 DVAID-----PVGLTRDDWLDLLMTHRIQPGFAADTLTVVHDWPASQCALARIRHDDPPV 228

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY  + E+ N   EL D  EQR RF ++   +        P+DE  LA L+++P 
Sbjct: 229 AERFELYLGSFEVANGYHELNDAQEQRARFVRDNAVRAARGLPQLPLDERLLAVLSQLPD 288

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+M + G   I +V+   F+++
Sbjct: 289 CAGVAVGVDRLLMALRGTTQIADVLAFDFARA 320


>gi|156842373|ref|XP_001644554.1| hypothetical protein Kpol_1003p1 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115200|gb|EDO16696.1| hypothetical protein Kpol_1003p1 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 571

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 80/345 (23%), Positives = 140/345 (40%), Gaps = 22/345 (6%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII--QDHIRKPLYLQ 79
           L+ R+ I   +R +     FIE+++  L        H   F T+L     D ++  L+L+
Sbjct: 219 LILRSFIIKQIRSFLDIQNFIEVETPILSNKSNGA-HATPFETKLSSMKHDPLQSNLFLR 277

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SPE   K+L+ +G ++++     +RN      H PEFT LE+Y+++ S E L+    ++
Sbjct: 278 ISPELWLKRLIVSGLDRVYEIGKVFRNEGIDQTHNPEFTTLEFYQSYASLEDLINQSQDL 337

Query: 140 IRCAAEVANQKIFSFQNVNC----------NPFSEPEYITVAEAFARY--ANIDLGTTLD 187
            +      N       +             N   +   +       +     ID      
Sbjct: 338 FKFILLNLNDSKLIHGDAKEVTSKLINELSNNNWKFNRVDFLPTLTKEINNGIDYTKFDL 397

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTW----SDIFSRILIEKIEPN-LGINCCTILDRYP 242
           N      + +   A+   +  + ++ +      I  ++    IE         T++  +P
Sbjct: 398 NDSISLLNSIPSDARNKILPASSEEGFKISSQQILDKLSSYYIESRYCNSLLPTLIYHHP 457

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN-E 301
              S LA   PA+P  +KRFELY    E  NA +E   P EQ  +F  +    +   + E
Sbjct: 458 TVMSPLAKSNPANPIISKRFELYINGKEYINAYEEENCPQEQEQKFLNQKFVNENFNDTE 517

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
              ID  ++  +   MP   G+ +G DRL ML+     I+EV+  
Sbjct: 518 ALSIDSQYIEAMKWGMPPIGGLGLGIDRLCMLLLNKQRIDEVLSF 562


>gi|294626371|ref|ZP_06704973.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292599372|gb|EFF43507.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 320

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 97/332 (29%), Positives = 161/332 (48%), Gaps = 21/332 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL-YL 78
             L  R  + +++R++F E   +E+++  L  +   E +I +FST          PL +L
Sbjct: 9   AALQLRARLNATIRDFFAERGVLEVETPVLSAAGNTEPNIESFSTRFTGHVDAGAPLRWL 68

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR   +  +L ++ + 
Sbjct: 69  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNPEFSMLEWYRVGWNDRRLAQETIE 128

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++R A  +                +  + +T    F +   ID    L +P +     L+
Sbjct: 129 LVRRALALVG------------RQARVQVLTYRALFVQTLGIDP---LCDPIETLHAALH 173

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A           T  D    ++  +I+P    +  T++  +PA + ALA I   DP  
Sbjct: 174 DVAID-----PVGLTRDDWLDLLMTHRIQPGFSGDTLTVVHDWPASQCALARIRHDDPPV 228

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY  + E+ N   EL D  EQR RF ++   +        P+DE  LA L+++P 
Sbjct: 229 AERFELYLGSFEVANGYHELNDAHEQRVRFVRDNAVRAARGLPQLPLDERLLAALSQLPD 288

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+M + G   I +V+   F+++
Sbjct: 289 CAGVAVGVDRLLMALRGTTQIADVLAFDFARA 320


>gi|115388583|ref|XP_001211797.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195881|gb|EAU37581.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 419

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 137/340 (40%), Gaps = 21/340 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R+ I   LR++F++  F+E+++  +    G     R F T     +   + L L+
Sbjct: 86  DIIRARSAIIQYLRQFFLDRSFMEVNTPIVASIAGGAI-ARPFYT--AATEFPERQLSLR 142

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +++F    ++RN      H PEFT  E+Y A+ + E LM     +
Sbjct: 143 IAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNPEFTTCEFYHAYANLEDLMSITETL 202

Query: 140 IRCAAEVANQKIF--SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +   A    Q     +    + +  +    I           I+       PD      L
Sbjct: 203 LSGMAGHLRQLNPNGTLHPPDVDFTAPFRRIDF------IPGIEAKIHRKLPDLAAADAL 256

Query: 198 YLQAQ---QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
               Q      + +  + +   +   +    +EP+      T +   P   S L+  +  
Sbjct: 257 PQIKQLFADLALELPANPSLPRLLDELCSTYVEPDCIH--PTFIINPPECLSPLSKSFTH 314

Query: 255 ---DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
                R   R EL+    E+ N  +E   P EQR +FE ++Q  K+   E   IDE +L 
Sbjct: 315 PTTGQRVAARGELFIEGREIVNTYEEENSPFEQRRKFEDQVQYSKEAN-EAEEIDESYLE 373

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L   +P + G   G DRL ML TGA  I +V+     ++
Sbjct: 374 ALEWGLPSTGGWGCGIDRLCMLFTGAKRIGDVLPFGNLRA 413


>gi|327298437|ref|XP_003233912.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326464090|gb|EGD89543.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 567

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 77/342 (22%), Positives = 139/342 (40%), Gaps = 24/342 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R++I  S+R +F   +F+E+++  L    G     + F T         +PL L+
Sbjct: 226 NILRARSLITHSMRNFFASREFMEVNTPILASKSGGAI-AQPFVTSATEF--PDRPLSLR 282

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +++F    ++RN      H PEFT  E+Y+A    E L++   ++
Sbjct: 283 IAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNPEFTTCEFYQAFADLESLIETTESL 342

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH---- 195
           +   A    Q          N    P  ++    + R   I           PD      
Sbjct: 343 LSTLAIDVQQLNK-----KLNNSLSPTTVSFTGPYRRVDFIPAIEAAIGRKLPDLQSGNA 397

Query: 196 --LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANI 251
              +        + +   +T   +  ++    +E    +   T +  +P   S    +  
Sbjct: 398 LSQVKEIFAALSLPLPAHETLPRLLDKLCSIYVESQ--LVEPTFIMNHPECMSPLSKSYR 455

Query: 252 YPADPRF-TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDF 309
           +P + +  + R EL+    E+ N  +E   P EQR +F +++  +     E    +DE +
Sbjct: 456 HPGNGQIVSARAELFVEGKEIMNMYEEENSPFEQRRKFHQQLSFR---DPENAGELDEGY 512

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           L  L   +P + G   G DRL ML TGA  I++V+     +S
Sbjct: 513 LQTLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLSFGNLRS 554


>gi|71279363|ref|YP_271407.1| hypothetical protein CPS_4763 [Colwellia psychrerythraea 34H]
 gi|71145103|gb|AAZ25576.1| conserved hypothetical protein TIGR00462 [Colwellia psychrerythraea
           34H]
          Length = 325

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 99/333 (29%), Positives = 152/333 (45%), Gaps = 25/333 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI----IQDHIRKPLYL 78
            KR  I   +R++F E   +E+++ SL      + ++ A S +              L+L
Sbjct: 13  QKRAKILQQIRQFFAERNVVEVETPSLSQGTVTDVYLNALSCKYDFLADSPVGHSTELFL 72

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           QTSPEF  K+LLA+G   IF  A A+R+ E G  H PEFTMLEWYR       LM +  +
Sbjct: 73  QTSPEFHMKRLLASGYGCIFQIAKAFRHEESGKNHNPEFTMLEWYRIGFDQFDLMSEVAD 132

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++                      +  + +  + F +  ++D  T   +      +   
Sbjct: 133 LLQVVLG----------------GDKAIFTSYQDIFLKTVSVDPLTATFDELTEVLNKYG 176

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A         D     +   I  E IEP +GI+    +  +P  +++LA     D R 
Sbjct: 177 KSADWLVEMNDADL----LLQFIFTEIIEPTIGIDAPQFIYDFPIAQASLAKKSIDDLRV 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
            +RFE Y   IEL N  +EL D  EQ+ RFE++  ++        PIDE+F+A L   +P
Sbjct: 233 AQRFECYFKGIELVNGFNELTDANEQQVRFEEDNAKRAAQGLAVKPIDENFIAALNHGLP 292

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           Q SG+A+G DRLVML      I+EV      ++
Sbjct: 293 QCSGVALGIDRLVMLALDIKTISEVQSFSIERA 325


>gi|294665963|ref|ZP_06731227.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292604266|gb|EFF47653.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 320

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 97/332 (29%), Positives = 160/332 (48%), Gaps = 21/332 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL-YL 78
             L  R  + +++R++F E   +E+++  L  +   E +I +FST          PL +L
Sbjct: 9   AALQLRARLNATIRDFFAERGVLEVETPVLSAAGNTEPNIESFSTRFTGHVDAGAPLRWL 68

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR   +  +L ++ + 
Sbjct: 69  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNPEFSMLEWYRVGWNDRRLAQETIE 128

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++R A  +                +  + +T    F +   ID    L +P +     L+
Sbjct: 129 LVRRALALVG------------RQARVQVLTYRALFVQTLGIDP---LCDPIETLHAALH 173

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A           T  D    ++  +I P    +  T++  +PA + ALA I   DP  
Sbjct: 174 DVAID-----PVGLTRDDWLDLLMTHRIRPGFSGDTLTVVHDWPASQCALARIRHDDPPV 228

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY  + E+ N   EL D  EQR RF ++   +        P+DE  LA L+++P 
Sbjct: 229 AERFELYLGSFEVANGYHELNDAHEQRVRFVRDNAVRAARGLPQLPLDERLLAALSQLPD 288

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+M + G   I +V+   F+++
Sbjct: 289 CAGVAVGVDRLLMALRGTTQIADVLAFDFARA 320


>gi|21242378|ref|NP_641960.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21107815|gb|AAM36496.1| lysyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 320

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 97/332 (29%), Positives = 160/332 (48%), Gaps = 21/332 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL-YL 78
             L  R  + +++R++F E   +E+++  L  +   E +I +FST          PL +L
Sbjct: 9   AALQLRARLNAAIRDFFAERGVLEVETPVLSEAGNTEPNIESFSTRFTGHVDAGAPLRWL 68

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR   +   L ++ + 
Sbjct: 69  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNPEFSMLEWYRVGWNDRSLAQETIE 128

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++R A  +                +  + +T    F +   ID    L +P +     L+
Sbjct: 129 LVRRALALVG------------RQARVQVLTYRALFVQTLGIDP---LCDPIETLHAALH 173

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A           T  D    ++  +I+P    +  T++  +PA + ALA I   DP  
Sbjct: 174 DVAID-----PVGLTRDDWLDLLMTHRIQPGFASDTLTVVHDWPASQCALARIRHDDPPV 228

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY  + E+ N   EL D  EQR RF ++   +        P+DE  LA L+++P 
Sbjct: 229 AERFELYLGSFEVANGYHELNDAQEQRARFVRDNAVRAARGLPQLPLDERLLAVLSQLPD 288

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+M + G   I +V+   F+++
Sbjct: 289 CAGVAVGVDRLLMALRGTTQIADVLAFDFARA 320


>gi|255940966|ref|XP_002561252.1| Pc16g09340 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585875|emb|CAP93604.1| Pc16g09340 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 531

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 15/337 (4%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R+ +   LR++FV+  F+E+ +  +    G     R F T         + L L+
Sbjct: 195 DIIRARSALVQYLRQFFVDRSFMEVSTPIVGSVAGGAI-ARPFYTSATEF--PDRQLSLR 251

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G EKIF    ++RN      H  EFT  E+Y+A+ + E LM    ++
Sbjct: 252 IAPELWLKRLVVGGFEKIFEIGPSFRNEGLDKTHNAEFTTCEFYQAYANLENLMAMTEDL 311

Query: 140 IRCAAEV--ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +   A    A     +      N  +    +                 L++PD  D+  +
Sbjct: 312 LSGMAAHIRALNTTGTLNPTTANFTAPFRRVDFLTGIEEATGHK-LPNLESPDALDK--V 368

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPA- 254
           +    +  + +  + T   +   +    +E        T +   P   S    + I+P  
Sbjct: 369 HAIFTELSLPLPTNPTLPRLLDELCSVYVESQCID--PTFIINPPECLSPLSKSFIHPTT 426

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
             R   R EL+    E+ N  +E   P EQR +FE +++  K    E   IDE +L  L 
Sbjct: 427 KQRVAARGELFIEGKEVVNTYEEENSPFEQRRKFEDQLRYGKATG-EAGEIDESYLEALE 485

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +P + G   G DRL ML TGA  I +V+     ++
Sbjct: 486 WGLPSTGGWGCGVDRLCMLFTGAKRITDVLPFGNLRA 522


>gi|162146334|ref|YP_001600793.1| lysyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209543663|ref|YP_002275892.1| tRNA synthetase class II (D K and N) [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161784909|emb|CAP54452.1| putative lysyl-tRNA synthetase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209531340|gb|ACI51277.1| tRNA synthetase class II (D K and N) [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 340

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 122/344 (35%), Positives = 179/344 (52%), Gaps = 13/344 (3%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +   P  + D    R   L +R ++   +R +F    ++E+++     +PG E H+R F 
Sbjct: 1   MTDSPHHDPDRIAGRLALLRRRALVGRGIRAFFDARGYLEVETPCAVPTPGEEVHLRVFR 60

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           TE    D  R+ L+L TSPEF+ K+++AA    +F  A  WRN E   LH PEFTMLEWY
Sbjct: 61  TEREHHDGTRQALFLHTSPEFAMKRIVAATGLPVFQLARVWRNAEGSHLHAPEFTMLEWY 120

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARYANIDL 182
           R   +   LM +   ++R        +             +  E +T+ +AFAR+A +DL
Sbjct: 121 RPGATLSGLMDETEALLRAVLPPVVHRPGGLAAGAEIRIDAPFERLTMEQAFARHAGLDL 180

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             T  +                       + W D+F R+L+E++EP +G +  T L  +P
Sbjct: 181 LPTEGDAGALAAAAGCAL--------RDGEDWEDLFFRLLMERVEPAIGRDRPTFLTHWP 232

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN-- 300
           A ++ALA   PADPR   RFELYA  IEL NA +EL DP+EQR RF  + + +  +Y   
Sbjct: 233 ASQAALARRDPADPRTALRFELYAGGIELANAFEELTDPVEQRRRFMADRERRAALYGAA 292

Query: 301 --ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
               +P+DE  LA L  +P  +GIA+GFDRLVML  GA  I ++
Sbjct: 293 PATAWPMDEALLAALDHLPPCAGIALGFDRLVMLAAGALRIGDI 336


>gi|8928398|sp|Q9Z614|SYK3_BUCAP RecName: Full=Putative uncharacterized protein YjeA
 gi|4378708|gb|AAD19636.1| lysyl-tRNA synthetase homolog [Buchnera aphidicola]
          Length = 324

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 95/349 (27%), Positives = 169/349 (48%), Gaps = 31/349 (8%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W      +    L+KR+ I + +R +F++   +E+++  L  S   + ++  F T  
Sbjct: 2   KKKWKPSASIKD---LMKRSKIIADIRSFFLKKNIMEVETPILSQSGVTDVNLMPFITNY 58

Query: 67  IIQDHI--RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +    +K L+L TSPE+  K+LL+AG   I+    ++RN E G  H PEFTMLEWY+
Sbjct: 59  FSFNDNIKKKNLWLITSPEYHMKRLLSAGSGSIYQICRSFRNQEFGQYHNPEFTMLEWYQ 118

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
              S E+++                +   F       F++ + I+  E F ++  ID   
Sbjct: 119 LSCSMEKMI----------------EEIDFFFQKILNFNKADKISYQEVFMKFLKID--- 159

Query: 185 TLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
               P       L+   ++  ++  +  ++  + +   I   +I+P LG      +  +P
Sbjct: 160 ----PLSTSLSELFQCYKKFNLKNLIYLENDLNQLIENIFTLQIQPFLGKEKPLFVYHFP 215

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           + ++ LA+I   D R ++RFE++   IEL N   EL D  EQR RF K+ +++  +    
Sbjct: 216 SEQACLASINKKDSRVSERFEIFFKGIELGNGFHELTDYFEQRKRFIKDNRKRCDMNLPE 275

Query: 303 YPIDEDFLAC-LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             ID+ FL      +P  SG+A+G DRL+M+    N+I++V+   F +S
Sbjct: 276 QKIDDYFLDAIHHGLPTCSGVAIGLDRLIMIALNKNSIDQVMSFSFERS 324


>gi|253700783|ref|YP_003021972.1| tRNA synthetase class II (D K and N) [Geobacter sp. M21]
 gi|251775633|gb|ACT18214.1| tRNA synthetase class II (D K and N) [Geobacter sp. M21]
          Length = 305

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 120/330 (36%), Positives = 173/330 (52%), Gaps = 36/330 (10%)

Query: 16  YRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP 75
            RRR  L++R  I S +RE+F E  ++E+++     +P  E  I A              
Sbjct: 7   ARRRQALVERGAIFSRIREFFQEKGYLEVETPFRIPAPAPEAQIDAI---------PASG 57

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
            +LQTSPE   K++L+AG  +IF     WR+GE+G  H  EFTMLEWYR+   Y  LM++
Sbjct: 58  WFLQTSPELCMKRMLSAGYPRIFQICRCWRDGERGARHLSEFTMLEWYRSEADYLVLMEE 117

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
              +++ AA  A      ++        + E ITVA+AF RYA   +   L +       
Sbjct: 118 TEALVQHAAATAATGSIGYRGYRIELSGKWERITVADAFLRYAGTSMWQALADGT----- 172

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                                 F  +++E+IEPNLG+   T +  YPA  SALA + P+D
Sbjct: 173 ----------------------FDEVMVERIEPNLGLARPTFIYDYPASCSALARLKPSD 210

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           P   +RFELY   +E+ NA  EL+DP+EQR RF  E  E+       YP+ E FLA L E
Sbjct: 211 PTVAERFELYIGGLEIANAFSELIDPVEQRARFVAEAAERAAQGKTGYPMPEKFLASLDE 270

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           MP+++GIA+G DRLVM++  A  I++V+  
Sbjct: 271 MPEAAGIALGLDRLVMVLLDAETIDDVVAF 300


>gi|302308332|ref|NP_985218.2| AER362Wp [Ashbya gossypii ATCC 10895]
 gi|299789404|gb|AAS53042.2| AER362Wp [Ashbya gossypii ATCC 10895]
          Length = 525

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 76/330 (23%), Positives = 133/330 (40%), Gaps = 15/330 (4%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
            L  R+   ++LR Y     F+E+++  L        +   F T L  QD  ++ L L+ 
Sbjct: 197 VLEFRHKALTALRAYLNRRGFLEVETPMLSAKSSGA-NATPFVTHLRGQD--KQALELRI 253

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           +PE   K+L   G ++++     +RN      H PEFT LE Y+ +   ++L++    ++
Sbjct: 254 APELWLKRLCVGGAQRVYEIGKVFRNEGIDATHNPEFTTLELYQCYAPLDELLELAQVLL 313

Query: 141 RCAAEVANQKIFSFQNVNC-NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           R      +  +                 +      +R   +D        D  D   + +
Sbjct: 314 RDICVAVDTPVSRQLLAEMAQNGGAFRRVEFLPTLSRETGVDWAAV----DLADSTAIRV 369

Query: 200 QAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTILD-RYPAPESALANIYPADPR 257
               AGI V         I +++  + IE     +        +PA  S LA    +   
Sbjct: 370 ALSGAGIDVPESIVSPQQILNKLCADYIEDRYCQSLLPTAILHHPAVMSPLA---KSAGL 426

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TE 315
              RFEL+ C  EL NA +E   P EQ  + + + + +++    E+  ID  ++  +   
Sbjct: 427 VANRFELFVCGRELINAYEEENCPQEQLKKMQLQQRHREQFHDQESMQIDHHYIEAMKYG 486

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           MP   G+ +G DRL ML+     I EV+  
Sbjct: 487 MPPIGGLGLGIDRLCMLLLAKARIEEVLPF 516


>gi|166711581|ref|ZP_02242788.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 320

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 97/332 (29%), Positives = 160/332 (48%), Gaps = 21/332 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL-YL 78
             L  R  + +++R +F E   +E+++  L  +   E +I +FST          P+ +L
Sbjct: 9   AALQLRARLNATIRNFFAERGVLEVETPVLSEAGNTEPNIESFSTRFTGHVDAGAPVRWL 68

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR   +   L ++ + 
Sbjct: 69  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNPEFSMLEWYRIGWNDRSLAQETIA 128

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +IR A  +  +                  +T    F +   ID    L +P +  R  L+
Sbjct: 129 LIRRALALVGRDAAVQV------------LTYRALFVQRLGIDP---LRDPIETLRAALH 173

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A           T  D    ++  +I+P    +  T++  +PA + ALA +   DP  
Sbjct: 174 DVAID-----PAGLTRDDWLDLLMTHRIQPGFASDTLTVVHDWPASQCALARVRHDDPPV 228

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY  ++E+ N   EL D  EQR RF ++   +        P+DE  LA L+++P 
Sbjct: 229 AERFELYLGSVEVANGYHELNDAQEQRARFVRDNAVRAARGLPQLPLDERLLAVLSQLPD 288

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+M + G   I +V+   F+++
Sbjct: 289 CAGVAVGVDRLLMALRGTAQIADVLAFDFARA 320


>gi|162451080|ref|YP_001613447.1| lysine--tRNA ligase [Sorangium cellulosum 'So ce 56']
 gi|161161662|emb|CAN92967.1| Lysine--tRNA ligase [Sorangium cellulosum 'So ce 56']
          Length = 439

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 107/319 (33%), Positives = 157/319 (49%), Gaps = 31/319 (9%)

Query: 32  LREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
           +R  F E  F+E+++ S+  SPG + H+ AF+ +        +P +L TSPE+  K+LL+
Sbjct: 146 VRALFAERGFLEVETPSMVPSPGLDLHLDAFAVQAA------RPTFLITSPEYQMKRLLS 199

Query: 92  AGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK- 150
            G  + F  A  +R GE G  H PEFTMLEWYRA    +++M D   I+R  A     + 
Sbjct: 200 GGVPRCFQLARCFRRGELGDRHNPEFTMLEWYRAFAGVDEVMADTEAIVRRVAGALGAEG 259

Query: 151 IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH 210
             S              I++ EAFAR+A +     +      +                 
Sbjct: 260 TISTSGKQVRLERPFPRISIGEAFARWAGVPADDAIALASSDEER--------------- 304

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTIL-DRYPAPESALANIYPADPRFTKRFELYACNI 269
                  F R+L++ +EP +      +    +PAP ++LA + P+DPR  +RFELY   +
Sbjct: 305 -------FFRLLVDAVEPAIAALPHPVFLVDFPAPFASLARLKPSDPRVCERFELYVAGV 357

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDR 328
           ELCN   EL DP+EQR R   +   +       YPIDE FL  L   MP ++G A+G DR
Sbjct: 358 ELCNGFGELTDPVEQRARLLADQAARAAQGKPVYPIDERFLDALEEGMPPAAGNALGVDR 417

Query: 329 LVMLVTGANNINEVIWTPF 347
           LV L  GA +I +V+  P 
Sbjct: 418 LVALCLGAPSIGDVLAFPH 436


>gi|164428694|ref|XP_964757.2| hypothetical protein NCU00931 [Neurospora crassa OR74A]
 gi|157072244|gb|EAA35521.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 543

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 137/380 (36%), Gaps = 42/380 (11%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +  +P +   + +   + R             L  R+ +   LR++F E  F+E  +  L
Sbjct: 112 LAPLPFK-LEDEEVRIQHRHIDMLVNRKTIDTLRLRSHLIKYLRDFFHERGFLEFQTPIL 170

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             +    T  R F+        + K L ++ +PE   K+L+  G +K+F    A+RN   
Sbjct: 171 AENASGAT-ARPFTVTASETS-VNKNLAMRIAPELWLKRLVVGGVDKVFELGPAFRNEGI 228

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-----FQNVNCNPFSE 164
              H PEF+M E+Y A+ + + L+     +I  AA      I +                
Sbjct: 229 DQTHNPEFSMCEFYNAYANLDDLITLTEELICGAASHCRDLIATKLDSLPAIDMSQYQRP 288

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA----HDDTWSDIFSR 220
            + +    A             D      R  L    +Q  I V      D T + +   
Sbjct: 289 FQQLEFIPALESALGF---KLPDLSASSSREDLLALLKQHKIEVPGLNKPDITLAKLLDN 345

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESA---LANIYPADPRFTKRFELYACNIELCNACDE 277
           +  E +EP   +     +  +P   S               + R EL+    EL N  +E
Sbjct: 346 LASEFLEP-YSLTKPLFITHHPVCMSPLSKSFVCPKTGQHVSARTELFINGKELANMYEE 404

Query: 278 LLDPIEQRHRFEKEMQEKKK-----------IYNETYPIDEDFLACLT-EMPQSSGIAMG 325
             DP  QR +F  ++   K+                  +DE ++  L   +P + G   G
Sbjct: 405 ENDPASQRQKFVDQLNAAKREASLAPGVYNDEGESAMEVDESYVQALESGLPPTGGWGCG 464

Query: 326 FDRLVMLVTGANNINEVIWT 345
            +R+VML +G   I++ +  
Sbjct: 465 IERMVMLFSGTKRISDCLSF 484


>gi|254565151|ref|XP_002489686.1| Mitochondrial lysine-tRNA synthetase [Pichia pastoris GS115]
 gi|238029482|emb|CAY67405.1| Mitochondrial lysine-tRNA synthetase [Pichia pastoris GS115]
 gi|328350105|emb|CCA36505.1| lysyl-tRNA synthetase, class II [Pichia pastoris CBS 7435]
          Length = 540

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 76/369 (20%), Positives = 138/369 (37%), Gaps = 34/369 (9%)

Query: 1   MHQIPSQPWWNRD-------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P +     D              + + +  +L R+ I S++R++  + QF+E+ + 
Sbjct: 173 LHPLPPK---LTDTAKINSLRVVDYLVNRKSQEIILARSKIISTIRKFLEDRQFVEVSTP 229

Query: 48  SLQYSPGNETHIRAFST---ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
            +  S G   +   F T    +       +PL L+ +PE   KKL+ +G +K+F     +
Sbjct: 230 IIANS-GTGANATPFVTSSEHIKNDMLQPEPLQLRVAPELWLKKLIISGFDKVFEIGKVF 288

Query: 105 RNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN---QKIFSFQNVNCNP 161
           RN      H PEF+  E+Y+   S E+LM    ++ R  +           +        
Sbjct: 289 RNEGIDSTHNPEFSTCEFYQTFTSLEELMNLTTDLFRSISTELLNAESLKLTHIQAKALQ 348

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
             E E +    A               P+      L    +   +      + +     +
Sbjct: 349 HEEFETLEFIPAIEEATG------KKLPENLGVAELENYFKSINLEFPKVKSPAQFLDTL 402

Query: 222 LIEKIEPNLG---INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             E +EP                P  +S            ++RFEL+    E  NA +E 
Sbjct: 403 SSEYLEPQCAKPTFIYHQPAILSPLAKSTSIKYGDRQYDISRRFELFINGNEYVNAYEEE 462

Query: 279 LDPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
            DP  Q  +F+ + + K+K    E    D  ++  +   MP + G  +G DRL ML+T +
Sbjct: 463 NDPFSQNEKFKLQTRSKEKHQDEEALVPDYKYVTMMEWGMPPTGGWGIGIDRLTMLLTDS 522

Query: 337 NNINEVIWT 345
             +  V+  
Sbjct: 523 ARVENVLTF 531


>gi|325915466|ref|ZP_08177780.1| lysyl-tRNA synthetase (class II) [Xanthomonas vesicatoria ATCC
           35937]
 gi|325538348|gb|EGD10030.1| lysyl-tRNA synthetase (class II) [Xanthomonas vesicatoria ATCC
           35937]
          Length = 320

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 94/332 (28%), Positives = 157/332 (47%), Gaps = 21/332 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL-YL 78
             L  R  + +++R +F E   +E+++  L  +   E +I +FST          P+ +L
Sbjct: 9   AALQLRAQLNAAIRAFFAERGVLEVETPILSQAGNTEPNIDSFSTRFSGHVDAGVPVRWL 68

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR   +   L ++ + 
Sbjct: 69  RTSPEYPLKRLLAAGLGDCYELGRVFRNGEAGGRHNPEFSMLEWYRVGWNDRALAQETIA 128

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++ A  +  ++                 ++  E F +   ID    L +P    R  L+
Sbjct: 129 LVQRALALVQREATVQV------------LSYRELFVQRLGIDP---LLDPVDALRAALH 173

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A           T  D    ++  +I+P    +  T++  +PA + ALA I    P  
Sbjct: 174 DVAID-----PQGLTRDDWLDLLMTHRIQPGFARDTLTVVYDWPASQCALARIRHDSPPV 228

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY    E+ N   EL D  EQR RF ++   +        P+DE  LA L+++P 
Sbjct: 229 AERFELYLGTYEVANGYHELNDAQEQRARFIRDNTVRALRGLPQLPLDEHLLAVLSQLPD 288

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+M +     I +V+   F+++
Sbjct: 289 CAGVAVGVDRLLMALCDTTQIADVLAFDFARA 320


>gi|326474610|gb|EGD98619.1| lysyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 567

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 74/340 (21%), Positives = 134/340 (39%), Gaps = 20/340 (5%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R++I  S+R +F   +F+E+++  L    G     + F T         +PL L+
Sbjct: 226 NVLRARSLITHSMRNFFANREFMEVNTPILASKSGGAI-AQPFVTSATEF--PDRPLSLR 282

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +++F    ++RN      H PEFT  E+Y+A    E L++   ++
Sbjct: 283 IAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNPEFTTCEFYQAFADLESLIETTESL 342

Query: 140 IRCAAEVANQKIFSFQN----VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
           +   A    Q      N       +       +    A             D        
Sbjct: 343 LSTLALEVQQLNKKLNNSLSPTTVSFTGPYRRVDFIPAIEEAIG---RKLPDLQSDDALS 399

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            +        + +   +T   +  ++    +E    +   T +  +P   S L+  Y   
Sbjct: 400 QVKETFATLSLPLPAHETLPRLLDKLCSTYVESQ--LVEPTFIMNHPECMSPLSKSYRHP 457

Query: 256 PR---FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLA 311
                 + R EL+    E+ N  +E   P EQR +F++++  +     E    +DE +L 
Sbjct: 458 ENGQIVSARAELFVEGKEIMNMYEEENSPFEQRRKFQQQLSFR---DPENAGELDEGYLQ 514

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L   +P + G   G DR+ ML TGA  I++V+     +S
Sbjct: 515 TLEWGLPPTGGWGCGIDRVCMLFTGARRISDVLSFGNLRS 554


>gi|58582032|ref|YP_201048.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623944|ref|YP_451316.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188576357|ref|YP_001913286.1| tRNA synthetases class II (D, K and N) subfamily [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|58426626|gb|AAW75663.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84367884|dbj|BAE69042.1| lysyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188520809|gb|ACD58754.1| tRNA synthetases class II (D, K and N) subfamily [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 320

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 97/332 (29%), Positives = 160/332 (48%), Gaps = 21/332 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL-YL 78
             L  R  + +++R +F E   +E+++  L  +   E +I +FST          P+ +L
Sbjct: 9   AALQLRARLNATIRNFFAERGVLEVETPVLSQAGNTEPNIESFSTRFTGHVDAGAPVRWL 68

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR   +   L ++ + 
Sbjct: 69  RTSPEYPLKRLLAAGAGDCYELGRVFRNGEAGGRHNPEFSMLEWYRIGWNDRSLAQETIA 128

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +IR A  +  +                  +T    F +   ID    L +P +  R  L+
Sbjct: 129 LIRRALALVGRDAAVQV------------LTYRALFVQRLGIDP---LRDPIETLRAALH 173

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A           T  D    ++  +I+P    +  T++  +PA + ALA +   DP  
Sbjct: 174 DVAID-----PAGLTRDDWLDLLMTHRIQPGFASDTLTVVHDWPASQCALARVRHDDPPV 228

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY  ++E+ N   EL D  EQR RF ++   +        P+DE  LA L+++P 
Sbjct: 229 AERFELYLGSVEVANGYHELNDAQEQRARFVRDNAVRAVRGLPQLPLDERLLAVLSQLPD 288

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+M + G   I +V+   F+++
Sbjct: 289 CAGVAVGVDRLLMALRGTAQIADVLAFDFARA 320


>gi|126666940|ref|ZP_01737916.1| lysyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628656|gb|EAZ99277.1| lysyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 322

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 99/343 (28%), Positives = 163/343 (47%), Gaps = 29/343 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W      R    L  R    S +R +F + Q +E+++  L      + ++ + +    + 
Sbjct: 7   WQPSAASR---ALKSRAQQLSFVRGFFAQRQVLEVETPVLGRCGVTDPNLSSIA--ARVS 61

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
              R+  +LQTSPE+  K+LLAAG   I+     +R+GE+G  H PEF+MLEWYR     
Sbjct: 62  AAGRQGGWLQTSPEYHMKRLLAAGCGDIYQVTKVFRDGERGRRHNPEFSMLEWYRCGFDD 121

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + LM +  +++    +                   P  ++  EA  R+A+ID  T     
Sbjct: 122 QTLMNEVADLVCSWLDCL----------------RPHTLSYREALRRWAHIDPFTC---- 161

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
              D  L     Q    +     +  D    ++   +EP LG++C   + +YPA +++LA
Sbjct: 162 --TDAQLHARCGQWMEPQQLVGMSRDDCLDLLMSFAVEPRLGLDCPVFIHQYPASQASLA 219

Query: 250 NIYPADPR-FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                       RFELY   +ELCN   EL D  EQR RF  + + ++         D+ 
Sbjct: 220 RTSQVGGFAVAHRFELYINGLELCNGYWELTDADEQRRRFAADNRLRQARGQAAMEQDDA 279

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           FLA + + +P  +G+A+G DRL+ML  GA++I+EV+  PF+++
Sbjct: 280 FLAAMDSGLPDCAGVALGLDRLLMLKLGASSIDEVLAFPFARA 322


>gi|148264203|ref|YP_001230909.1| tRNA synthetase, class II (D, K and N) [Geobacter uraniireducens
           Rf4]
 gi|146397703|gb|ABQ26336.1| tRNA synthetase, class II (D, K and N) [Geobacter uraniireducens
           Rf4]
          Length = 307

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 115/330 (34%), Positives = 164/330 (49%), Gaps = 37/330 (11%)

Query: 17  RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL 76
           RR+  L  R+ I   +R +F++  ++E+D+     +P  E++I A               
Sbjct: 9   RRKETLRGRSTIIQEIRRFFIKEGYLEVDTPLRIPAPAPESYIEAI---------PSGRW 59

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           +L TSPE   K++LAAG E+IF     WR+GE+G  H PEFTMLEWYR    Y  LM +C
Sbjct: 60  FLHTSPELCMKRMLAAGYERIFQICRCWRDGERGIRHLPEFTMLEWYRIDADYRDLMSEC 119

Query: 137 MNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
             +IR    V        +Q +        E +TV+EAF RY  + +   L+        
Sbjct: 120 EALIRSVIHVLGHGGSIRYQGMAVEINEPWEKLTVSEAFIRYNGMTMAEALET------- 172

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                               D F  I++  IEP LG    T +  YPA   ALA I   +
Sbjct: 173 --------------------DQFDEIMVRDIEPRLGFGKPTFIYDYPAERGALARISKDN 212

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           P   +RFELY   +EL NA  EL D  EQR RF +E   +  +   TYP+ E FL  L++
Sbjct: 213 PAVAERFELYIGGLELANAFSELTDAQEQRDRFVQESTFRASMNRATYPLPEKFLDELSD 272

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           MP S+GIA+G DRLVM++   ++I++V+  
Sbjct: 273 MPPSAGIALGVDRLVMVLLDLSSIDDVVAF 302


>gi|169795015|ref|YP_001712808.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase)(PoxA)
           [Acinetobacter baumannii AYE]
 gi|169147942|emb|CAM85805.1| putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(PoxA)
           [Acinetobacter baumannii AYE]
          Length = 333

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 152/329 (46%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + + +R++F E   +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 21  DALKARAKLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQA-LRHINGKLQTQYLQ 79

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 80  TSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGLDLKALMHETADL 139

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   +    ++             P  ++   AF    +I       NP Q     L  
Sbjct: 140 LQTCLQHRFGEV------------RPFILSYKHAFQDRLDI-------NPLQATLKQLKD 180

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY--PADPR 257
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +        
Sbjct: 181 TANRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDAPVFLTDFPPEMASLAKVKLDEDGEE 240

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+ K      P+DE  LA L  MP
Sbjct: 241 VAARFEVYIEGLELANAYDELLDSDVLRSRFEADNAERAKQGLHIMPLDEHLLAALPHMP 300

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+ T    I +VI  P
Sbjct: 301 ECSGIALGIDRLLMVATDQLKIEKVIAFP 329


>gi|188992084|ref|YP_001904094.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167733844|emb|CAP52050.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris]
          Length = 324

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 94/332 (28%), Positives = 149/332 (44%), Gaps = 21/332 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYL 78
             L  R  + + +R +F E   +E+++  L  +   E +I +FST      D      +L
Sbjct: 13  EALRLRARLNALIRGFFAERAVLEVETPVLSAAGNTEPNIESFSTRFSGHVDAGAPTRWL 72

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR    +  L  + + 
Sbjct: 73  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNPEFSMLEWYRVGWDHRALANETIA 132

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +I  A  +  +                  +T  E F  +  ID      +  +     + 
Sbjct: 133 LIERALALVGRSASVNV------------LTYRELFLHHLGIDPLLAPLDVLRAPLADVA 180

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           + A           T  D    ++   I+P    +  T++  +PA + ALA I    P  
Sbjct: 181 IAA--------DGLTRDDWLDLLMTHHIQPGFARDTLTVVHDWPASQCALARIRNGTPPV 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY    E+ N   EL D  EQR RFE++ Q +        P+DE  L  L ++P 
Sbjct: 233 AERFELYLGAYEVANGYHELNDAHEQRMRFERDNQRRAARGLPPLPLDERLLQALPQLPD 292

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+M + G   I +V+   F+ +
Sbjct: 293 CAGVAVGVDRLLMAMRGTTQIADVLAFAFAHA 324


>gi|21231025|ref|NP_636942.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66768970|ref|YP_243732.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21112649|gb|AAM40866.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66574302|gb|AAY49712.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 324

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 94/332 (28%), Positives = 149/332 (44%), Gaps = 21/332 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYL 78
             L  R  + + +R +F E   +E+++  L  +   E +I +FST      D      +L
Sbjct: 13  EALRLRARLNALIRGFFAERAVLEVETPVLSAAGNTEPNIESFSTRFSGHVDAGAPTRWL 72

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR    +  L  + + 
Sbjct: 73  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNPEFSMLEWYRVGWDHRALANETIA 132

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +I  A  +  +                  +T  E F  +  ID      +  +     + 
Sbjct: 133 LIERALALVGRSASVNV------------LTYRELFLHHLGIDPLLAPLDVLRAPLADVA 180

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           + A           T  D    ++   I+P    +  T++  +PA + ALA I    P  
Sbjct: 181 IAA--------DGLTRDDWLDLLMTHHIQPGFARDTLTVVHDWPASQCALARIRNDTPPV 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY    E+ N   EL D  EQR RFE++ Q +        P+DE  L  L ++P 
Sbjct: 233 AERFELYLGAYEVANGYHELNDAHEQRMRFERDNQRRAARGLPPLPLDERLLQALPQLPD 292

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+M + G   I +V+   F+ +
Sbjct: 293 CAGVAVGVDRLLMAMRGTTQIADVLAFAFAHA 324


>gi|323519144|gb|ADX93525.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase)(PoxA)
           [Acinetobacter baumannii TCDC-AB0715]
          Length = 333

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 154/329 (46%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + + +R++F E + +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 21  DALKARAKLYTQIRQFFAEREVMEVETPIVSQAGVTDVHLASVQA-LRHINGKLQTQYLQ 79

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 80  TSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGLDLKALMHETADL 139

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   +    ++             P  ++   AF    +I       NP Q     L  
Sbjct: 140 LQTCLQHRFGEV------------RPFILSYKHAFQDRLDI-------NPLQATLKQLKD 180

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY--PADPR 257
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +        
Sbjct: 181 TANRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDAPVFLTDFPPEMASLAKVKLDEDGEE 240

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+ K      P+DE  LA L+ MP
Sbjct: 241 VAARFEVYIEGLELANAYDELLDSDVLRSRFEADNAERAKQGLHIMPLDEHLLAALSHMP 300

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+ T    I +VI  P
Sbjct: 301 ECSGIALGIDRLLMVATDQLKIEKVIAFP 329


>gi|260556494|ref|ZP_05828712.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260409753|gb|EEX03053.1| lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 333

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 152/329 (46%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + + +R++F E   +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 21  DALKARAKLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQA-LRHINGKLQTQYLQ 79

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 80  TSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGLDLKALMHETADL 139

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   +    ++             P  ++   AF    +I       NP Q     L  
Sbjct: 140 LQTCLQHRFGEV------------RPFILSYKHAFQDRLDI-------NPLQATLKQLKD 180

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY--PADPR 257
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +        
Sbjct: 181 TANRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDAPVFLTDFPPEMASLAKVKLDEDGEE 240

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+ K      P+DE  LA L  MP
Sbjct: 241 VAARFEVYIEGLELANAYDELLDSDVLRSRFEADNAERAKQGLHVMPLDEHLLAALPHMP 300

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+ T    I +VI  P
Sbjct: 301 ECSGIALGVDRLLMVATDQLKIEKVIAFP 329


>gi|153822306|ref|ZP_01974973.1| lysyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126520202|gb|EAZ77425.1| lysyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 469

 Score =  222 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 75/302 (24%), Positives = 129/302 (42%), Gaps = 21/302 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+  Y+ LM     ++   A EV       +         +  
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVALEVLGSTSMPYGEHTVEFGGKYA 324

Query: 167 YITVAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +++ +A   Y  N      L   D  +R L+   A+   + V    T   +   I  E 
Sbjct: 325 RMSMFDAIKHYNPNHAQIQALTEEDIQNRDLMVSIAKSVHVDVEPFWTCGQLLEEIFGET 384

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP   +   T +  YPA  S LA     +P FT RFE +    E+ N   EL D  +Q 
Sbjct: 385 AEPK--LMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQD 442

Query: 286 HR 287
            R
Sbjct: 443 AR 444


>gi|182682557|ref|YP_001830717.1| tRNA synthetase class II (D K and N) [Xylella fastidiosa M23]
 gi|182632667|gb|ACB93443.1| tRNA synthetase class II (D K and N) [Xylella fastidiosa M23]
 gi|307578836|gb|ADN62805.1| lysyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 316

 Score =  222 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 93/327 (28%), Positives = 149/327 (45%), Gaps = 21/327 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYL 78
             L  R  + + +R +F +   +E+++  L  +   E +I +F+T      D      +L
Sbjct: 5   DTLRLRARLNTMIRRFFADRGVLEVETPLLSAAGNTEPNIHSFTTCFTGHCDAGAAQRWL 64

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEFTMLEWYR    + +L ++   
Sbjct: 65  RTSPEYPMKRLLAAGIGDCYELGRVFRNGEAGGRHNPEFTMLEWYRVGWDHHRLAEETTA 124

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++R A  +  +                   T  + F    +ID         +       
Sbjct: 125 LVREALSLVERTATLHVT------------TYRQLFLDILDIDPLRAPQTVLR------- 165

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
            QA   G       +  D    ++  +I+P    +  T++D +PA + ALA I   DP  
Sbjct: 166 -QALDGGEINPDGLSRDDWLDLLMTHRIQPTFPTDRITVIDDWPATQCALARIRSDDPPV 224

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY    E+ N   EL D  EQR RFE + Q +        P+DE  L  L+ +P 
Sbjct: 225 AERFELYLGVHEIANGYHELNDATEQRRRFEHDNQVRAARGLPQMPLDEPLLNVLSRLPD 284

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWT 345
            +G+A+G DRL+M ++   +I +V+  
Sbjct: 285 CAGVAVGVDRLLMAMSATASIADVLAF 311


>gi|307824008|ref|ZP_07654235.1| tRNA synthetase class II (D K and N) [Methylobacter tundripaludum
           SV96]
 gi|307734792|gb|EFO05642.1| tRNA synthetase class II (D K and N) [Methylobacter tundripaludum
           SV96]
          Length = 306

 Score =  222 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 102/324 (31%), Positives = 161/324 (49%), Gaps = 19/324 (5%)

Query: 28  IQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCK 87
           + S +R++F E   +E+++  L +S G +  +  F+TE      +R+ L+LQTSPEF+ K
Sbjct: 1   MLSEIRQFFAERSVLEVETPLLSHSIGTDPQLAFFTTEY-CLSPLRQTLFLQTSPEFAMK 59

Query: 88  KLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
           +LLAAG   I+    A+RNGE G  H PEFTMLEWYR   +  QLM +   +I       
Sbjct: 60  RLLAAGSGSIYQIGKAFRNGESGRFHNPEFTMLEWYRVGFTLPQLMDEIAELIAGLFSG- 118

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
                        P  E + ++  E F  +  +D        D       +  ++   I 
Sbjct: 119 ------------QPLQETQRVSYQEIFGSFTGLDPLV-FSYQDYCAFAREFQLSEAVAIC 165

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                 W      I   K++P+LG N   ++  YPA +S+LA I       T R EL+  
Sbjct: 166 GHDHAVW---LDFIFSHKVQPHLGDNALCMVYGYPACQSSLARINEQCSLITDRVELFIN 222

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGF 326
            IEL N   EL+D  EQ  RF KE+  +++        D+  ++ L   +P+ SG+A+G 
Sbjct: 223 GIELGNGYYELVDADEQSKRFNKELVIRQQQKLAVSVKDKRLVSALESGLPECSGVAIGL 282

Query: 327 DRLVMLVTGANNINEVIWTPFSQS 350
           DRL+ML++G+ +I +V+  P  ++
Sbjct: 283 DRLLMLLSGSESIEDVLSFPIHRA 306


>gi|153006692|ref|YP_001381017.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter sp. Fw109-5]
 gi|152030265|gb|ABS28033.1| tRNA synthetase class II (D K and N) [Anaeromyxobacter sp. Fw109-5]
          Length = 390

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 104/318 (32%), Positives = 165/318 (51%), Gaps = 6/318 (1%)

Query: 31  SLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH-IRKPLYLQTSPEFSCKKL 89
            +R +     + E+++  L   PG E H+  F T  + +     +P +L TSPE++ K+L
Sbjct: 70  EVRRFLSSLGYEEVETPCLVPVPGMEPHLHPFETRFLPEGGGEGRPRWLITSPEYAMKRL 129

Query: 90  LAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-N 148
           LA G  +IF  +  +RNGE    H PEFTMLE YRA   YE +M+D   ++   A     
Sbjct: 130 LAEGFPRIFQLSRVFRNGEVSRTHNPEFTMLELYRAGTDYEGVMQDLERLVEACARALAG 189

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
               +      +  +     TVA+AF R+A +D    L   D     L            
Sbjct: 190 GTRVARGGRTLDLAAPYPRTTVADAFRRHAGVD----LAACDGDAARLAEAARAAGHDPG 245

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
              +++ D+F R++++ +EP LG+     L  +PA  +AL+ +   DPR+ +RFELYA  
Sbjct: 246 PAGESFDDVFFRVMLDAVEPRLGVERPEYLVDWPASMAALSRVKRGDPRWAERFELYAGG 305

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDR 328
           +EL N   EL D  EQR R  +E   ++++    +P+DE FL  +  +P++ G+A+GFDR
Sbjct: 306 LELANGYTELNDAAEQRARLAEEQALRRRLGRPVFPLDEPFLEAVGRLPEAGGVAVGFDR 365

Query: 329 LVMLVTGANNINEVIWTP 346
           ++MLV  A  I +V+  P
Sbjct: 366 VLMLVAEAAAIEDVLLFP 383


>gi|38567283|emb|CAE76572.1| related to lysyl-tRNA synthetase (lysine--tRNA ligase) [Neurospora
           crassa]
          Length = 594

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 137/380 (36%), Gaps = 42/380 (11%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +  +P +   + +   + R             L  R+ +   LR++F E  F+E  +  L
Sbjct: 163 LAPLPFK-LEDEEVRIQHRHIDMLVNRKTIDTLRLRSHLIKYLRDFFHERGFLEFQTPIL 221

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             +    T  R F+        + K L ++ +PE   K+L+  G +K+F    A+RN   
Sbjct: 222 AENASGAT-ARPFTVTASETS-VNKNLAMRIAPELWLKRLVVGGVDKVFELGPAFRNEGI 279

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-----FQNVNCNPFSE 164
              H PEF+M E+Y A+ + + L+     +I  AA      I +                
Sbjct: 280 DQTHNPEFSMCEFYNAYANLDDLITLTEELICGAASHCRDLIATKLDSLPAIDMSQYQRP 339

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA----HDDTWSDIFSR 220
            + +    A             D      R  L    +Q  I V      D T + +   
Sbjct: 340 FQQLEFIPALESALGF---KLPDLSASSSREDLLALLKQHKIEVPGLNKPDITLAKLLDN 396

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESA---LANIYPADPRFTKRFELYACNIELCNACDE 277
           +  E +EP   +     +  +P   S               + R EL+    EL N  +E
Sbjct: 397 LASEFLEP-YSLTKPLFITHHPVCMSPLSKSFVCPKTGQHVSARTELFINGKELANMYEE 455

Query: 278 LLDPIEQRHRFEKEMQEKKK-----------IYNETYPIDEDFLACLT-EMPQSSGIAMG 325
             DP  QR +F  ++   K+                  +DE ++  L   +P + G   G
Sbjct: 456 ENDPASQRQKFVDQLNAAKREASLAPGVYNDEGESAMEVDESYVQALESGLPPTGGWGCG 515

Query: 326 FDRLVMLVTGANNINEVIWT 345
            +R+VML +G   I++ +  
Sbjct: 516 IERMVMLFSGTKRISDCLSF 535


>gi|28199805|ref|NP_780119.1| lysyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|28057926|gb|AAO29768.1| lysyl-tRNA synthetase [Xylella fastidiosa Temecula1]
          Length = 317

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 93/327 (28%), Positives = 149/327 (45%), Gaps = 21/327 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYL 78
             L  R  + + +R +F +   +E+++  L  +   E +I +F+T      D      +L
Sbjct: 6   DTLRLRARLNTMIRRFFADRGVLEVETPLLSAAGNTEPNIHSFTTCFTGHCDAGAAQRWL 65

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEFTMLEWYR    + +L ++   
Sbjct: 66  RTSPEYPMKRLLAAGIGDCYELGRVFRNGEAGGRHNPEFTMLEWYRVGWDHHRLAEETTA 125

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++R A  +  +                   T  + F    +ID         +       
Sbjct: 126 LVREALSLVERTATLHVT------------TYRQLFLDILDIDPLRAPQTVLR------- 166

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
            QA   G       +  D    ++  +I+P    +  T++D +PA + ALA I   DP  
Sbjct: 167 -QALDGGEINPDGLSRDDWLDLLMTHRIQPTFPTDRITVIDDWPATQCALARIRSDDPPV 225

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY    E+ N   EL D  EQR RFE + Q +        P+DE  L  L+ +P 
Sbjct: 226 AERFELYLGVHEIANGYHELNDATEQRRRFEHDNQVRAARGLPQMPLDEPLLNVLSRLPD 285

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWT 345
            +G+A+G DRL+M ++   +I +V+  
Sbjct: 286 CAGVAVGVDRLLMAMSATASIADVLAF 312


>gi|213158322|ref|YP_002320373.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215482563|ref|YP_002324753.1| Lysyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301345392|ref|ZP_07226133.1| putative lysyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301511594|ref|ZP_07236831.1| putative lysyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301594786|ref|ZP_07239794.1| putative lysyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332854287|ref|ZP_08435287.1| lysine--tRNA ligase-like protein GenX [Acinetobacter baumannii
           6013150]
 gi|332865663|ref|ZP_08436489.1| lysine--tRNA ligase-like protein GenX [Acinetobacter baumannii
           6013113]
 gi|213057482|gb|ACJ42384.1| lysyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213987161|gb|ACJ57460.1| Lysyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|332728103|gb|EGJ59492.1| lysine--tRNA ligase-like protein GenX [Acinetobacter baumannii
           6013150]
 gi|332735184|gb|EGJ66264.1| lysine--tRNA ligase-like protein GenX [Acinetobacter baumannii
           6013113]
          Length = 324

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 152/329 (46%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + + +R++F E   +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 12  DALKARAKLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQA-LRHINGKLQTQYLQ 70

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 71  TSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGLDLKALMHETADL 130

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   +    ++             P  ++   AF    +I       NP Q     L  
Sbjct: 131 LQTCLQHRFGEV------------RPFILSYKHAFQDRLDI-------NPLQATLKQLKD 171

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY--PADPR 257
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +        
Sbjct: 172 TANRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDAPVFLTDFPPEMASLAKVKLDEDGEE 231

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+ K      P+DE  LA L  MP
Sbjct: 232 VAARFEVYIEGLELANAYDELLDSDVLRSRFEADNAERAKQGLHIMPLDEHLLAALPHMP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+ T    I +VI  P
Sbjct: 292 ECSGIALGIDRLLMVATDQLKIEKVIAFP 320


>gi|296818309|ref|XP_002849491.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238839944|gb|EEQ29606.1| lysyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 562

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 80/342 (23%), Positives = 136/342 (39%), Gaps = 24/342 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R++I  S+R +F E  F+E+ +  L    G     + F T         + L L+
Sbjct: 221 NVLRARSLITHSMRNFFAERDFMEVSTPILASKSGGAI-AQPFVTSATEF--PERQLSLR 277

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +++F    ++RN      H PEFT  E+Y+A    E L++   ++
Sbjct: 278 IAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNPEFTTCEFYQAFADLESLIETTESL 337

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +   A           N   N    P  ++    + R   I           PD      
Sbjct: 338 LSTLAPE-----IQRLNEKLNNSLNPTPVSFTGPYRRIDFIPAIEEAIGRKLPDLQAEDA 392

Query: 200 QAQ------QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
             Q         + +    T   +  ++    +E    +N  T +  +P   S L+  Y 
Sbjct: 393 LLQVNQIFADLSLPLPAHQTLPRLLDKLCSTYVESQ--LNEPTFILNHPECMSPLSKSYR 450

Query: 254 ADPR---FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDF 309
                   + R EL+    E+ N  +E   P EQR +F++++  +     E    +DE +
Sbjct: 451 HPESGQVVSARAELFVEGKEIMNMYEEENSPFEQRRKFQQQLSFR---DPENAGELDEGY 507

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           L  L   +P + G   G DRL ML TGA  I++V+     +S
Sbjct: 508 LQTLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLAFGNLRS 549


>gi|256090519|ref|XP_002581235.1| lysyl-tRNA synthetase [Schistosoma mansoni]
 gi|238667091|emb|CAZ37474.1| lysyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 485

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 72/314 (22%), Positives = 128/314 (40%), Gaps = 27/314 (8%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++Q+P   +   +++  +R+R              + R  I + +R +  +  F+E+++ 
Sbjct: 170 LYQLPHMHYGVKDKETRFRQRYLDLLMNEDVRQRFITRARIINYVRRFLDDLGFLEVETP 229

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   LY++ +PE   K L+  G  +++     +RN 
Sbjct: 230 MMNTIAGGAA-AKPFIT---YHNDLNMNLYMRVAPELYLKMLIIGGLNRVYELGRVFRNE 285

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y A+  YE LM    ++I    +          + +         
Sbjct: 286 GIDLTHNPEFTSCEFYMAYADYEDLMTITEDLISGLVKHLFGSYIIKYHPDGAESDEIIV 345

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     + I   +  A   N  L        +  R      A Q GI      T + +  
Sbjct: 346 DCTPPFKRINFYDDLAAKLNTKLPLPETFETEETRQFFLKIAAQHGIDCPEPKTTARLLD 405

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           ++  E +EP       T L  +P   S LA  + + P  T+RFEL+  + ELCNA  EL 
Sbjct: 406 KLAGEFLEPLCV--NPTFLTCHPCIMSPLAKEHRSRPGLTERFELFMLHKELCNAYTELN 463

Query: 280 DPIEQRHRFEKEMQ 293
           DP+ QR RF ++ +
Sbjct: 464 DPVVQRERFLEQAK 477


>gi|71275189|ref|ZP_00651476.1| Lysine--tRNA ligase [Xylella fastidiosa Dixon]
 gi|71899827|ref|ZP_00681977.1| Lysine--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|170731180|ref|YP_001776613.1| lysine--tRNA ligase [Xylella fastidiosa M12]
 gi|71163998|gb|EAO13713.1| Lysine--tRNA ligase [Xylella fastidiosa Dixon]
 gi|71730418|gb|EAO32499.1| Lysine--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|167965973|gb|ACA12983.1| Lysine--tRNA ligase [Xylella fastidiosa M12]
          Length = 316

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 92/327 (28%), Positives = 148/327 (45%), Gaps = 21/327 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYL 78
             L  R  + + +R +F +   +E+++  L  +   E +I +F+T      D      +L
Sbjct: 5   DTLRLRARLNTMIRRFFADRGVLEVETPLLSAAGNTEPNIHSFTTCFTGHCDAGAAQRWL 64

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEFTMLEWYR    + +L ++   
Sbjct: 65  RTSPEYPLKRLLAAGIGDCYELGRVFRNGEAGGRHNPEFTMLEWYRVGWDHHRLAEETTA 124

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++R A  +  +                   T  + F    +ID         +       
Sbjct: 125 LVREALALVERTATLHVT------------TYRQLFLDILDIDPLFAPQTVLR------- 165

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
            QA   G       +  D    ++  +I+     +  T++D +PA + ALA I   DP  
Sbjct: 166 -QALDGGEINPDGLSRDDWLDLLMTHRIQSTFPTDRITVIDDWPATQCALARIRSDDPPV 224

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY    E+ N   EL D  EQR RFE + Q +        P+DE  L  L+ +P 
Sbjct: 225 AERFELYLGVHEIANGYHELNDATEQRRRFEHDNQVRAARGLPQMPLDEPLLNVLSRLPD 284

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWT 345
            +G+A+G DRL+M ++   +I +V+  
Sbjct: 285 CAGVAVGVDRLLMAMSATASIADVLAF 311


>gi|184159200|ref|YP_001847539.1| truncated lysyl-tRNA synthetase (class II) [Acinetobacter baumannii
           ACICU]
 gi|332876030|ref|ZP_08443816.1| lysine--tRNA ligase-like protein GenX [Acinetobacter baumannii
           6014059]
 gi|183210794|gb|ACC58192.1| truncated lysyl-tRNA synthetase (class II) [Acinetobacter baumannii
           ACICU]
 gi|322509116|gb|ADX04570.1| PoxA [Acinetobacter baumannii 1656-2]
 gi|332735896|gb|EGJ66937.1| lysine--tRNA ligase-like protein GenX [Acinetobacter baumannii
           6014059]
          Length = 324

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 154/329 (46%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + + +R++F E + +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 12  DALKARAKLYTQIRQFFAEREVMEVETPIVSQAGVTDVHLASVQA-LRHINGKLQTQYLQ 70

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 71  TSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGLDLKALMHETADL 130

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   +    ++             P  ++   AF    +I       NP Q     L  
Sbjct: 131 LQTCLQHRFGEV------------RPFILSYKHAFQDRLDI-------NPLQATLKQLKD 171

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY--PADPR 257
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +        
Sbjct: 172 TANRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDAPVFLTDFPPEMASLAKVKLDEDGEE 231

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+ K      P+DE  LA L+ MP
Sbjct: 232 VAARFEVYIEGLELANAYDELLDSDVLRSRFEADNAERAKQGLHIMPLDEHLLAALSHMP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+ T    I +VI  P
Sbjct: 292 ECSGIALGIDRLLMVATDQLKIEKVIAFP 320


>gi|193078112|gb|ABO13053.2| putative lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 324

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 152/329 (46%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + + +R++F E   +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 12  DALKARAKLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQA-LRHINGKLQTQYLQ 70

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 71  TSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGLDLKALMHETADL 130

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   +    ++             P  ++   AF    +I       NP Q     L  
Sbjct: 131 LQTCLQHRFGEV------------RPFILSYKHAFQDRLDI-------NPLQATLKQLKD 171

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY--PADPR 257
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +        
Sbjct: 172 TANRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDAPVFLTDFPPEMASLAKVKLDEDGEE 231

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+ K      P+DE  LA L  MP
Sbjct: 232 VAARFEVYIEGLELANAYDELLDADVLRSRFEADNAERAKQGLHVMPLDEHLLAALPHMP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+ T    I +VI  P
Sbjct: 292 ECSGIALGVDRLLMVATDQLKIEKVIAFP 320


>gi|289763777|ref|ZP_06523155.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis GM 1503]
 gi|289711283|gb|EFD75299.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis GM 1503]
          Length = 308

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 76/316 (24%), Positives = 131/316 (41%), Gaps = 18/316 (5%)

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           +E+++  LQ   G     R F T     + +    Y++ +PE   K+ +  G  K+F F 
Sbjct: 1   MEVETPVLQTLAGGAA-ARPFVTHF---NALDIDRYMRIAPELFLKRCMVGGSAKVFEFN 56

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +RN      H PEF+MLE Y+ + +Y+        +I+  A+ A              
Sbjct: 57  RVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLPDGSVY 116

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH------DDTWS 215
             + E+ T+      Y ++ +    +   Q     L   A   G+               
Sbjct: 117 DIDGEWATIQ----MYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHG 172

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            +   +    +  +  ++  T +  +P   + L   + + P  T++++LY   IEL    
Sbjct: 173 KLIEELWERTVGKS--LSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGY 230

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL DP+ QR RF  + +      +E   +DEDFLA L   MP  +G  MG DRL+M +T
Sbjct: 231 SELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLT 290

Query: 335 GANNINEVIWTPFSQS 350
           G  +I E +  P  + 
Sbjct: 291 GL-SIRETVLFPIVRP 305


>gi|255718281|ref|XP_002555421.1| KLTH0G08954p [Lachancea thermotolerans]
 gi|238936805|emb|CAR24984.1| KLTH0G08954p [Lachancea thermotolerans]
          Length = 524

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 86/360 (23%), Positives = 143/360 (39%), Gaps = 24/360 (6%)

Query: 1   MHQIPSQPWWNRDFHYRRR---------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY 51
           +  +P +   +     + R           L  R+ + S+LRE+     F+E ++  L  
Sbjct: 165 LRALPPR-LSDPAKRNQNRVLDYLVNGHDALRVRHSVLSALREFLDARGFLEAETPVLSP 223

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
                     F+T     +     L L+ +PE   K+L+ AG ++++     +RN     
Sbjct: 224 KANGAA-AEPFTTRTNATNAA---LQLRVAPELWLKRLVVAGVDRVYELGRVFRNEGVDA 279

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEYITV 170
            H PEFT LE+Y+ + S E L+     ++    E A+  +    + V          +  
Sbjct: 280 SHNPEFTTLEFYQTYASMEDLIALAEQLLLHVLERADTARARELKAVLLANGGRFARVEF 339

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEP- 228
                R   ID        D  D   L    +  GI +   D +   I + +    IE  
Sbjct: 340 LPTLQRETGIDFSQL----DLADPRALAAALEARGIELDTADRSPQQILNALCARYIEDR 395

Query: 229 NLGINCCTILDRYPAPESALANIYPADPR-FTKRFELYACNIELCNACDELLDPIEQRHR 287
           +   +  T++  +P   S LA   P D    TKRFE++    E  NA +E   P  Q  +
Sbjct: 396 HCRGSLPTLIFHHPTVMSPLAKGNPDDDMLTTKRFEVFIGGKEYINAYEEENCPQAQLQK 455

Query: 288 FEKEMQEKKK-IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE + Q ++     E+  ID  ++  +   MP   G  +G DRL ML+TG   I  V+  
Sbjct: 456 FEAQQQAQEAYGDRESLAIDHAYVDAMKWGMPPIGGFGVGIDRLCMLLTGDTRIERVLSF 515


>gi|315041621|ref|XP_003170187.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311345221|gb|EFR04424.1| lysyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 567

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 73/340 (21%), Positives = 136/340 (40%), Gaps = 20/340 (5%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R++I +S+R +F    F+E+ +  L    G     + F T         +PL L+
Sbjct: 226 NILRARSLITNSMRTFFANKDFVEVSTPILASKSGGAI-AQPFVTSATEF--PERPLSLR 282

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +++F    ++RN      H PEFT  E+Y+A  + E L++   ++
Sbjct: 283 IAPELWLKRLVVGGFDRVFEIGPSFRNEGLDKTHNPEFTTCEFYQAFANLESLIETTESL 342

Query: 140 IRCAAEVAN----QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
           +   A        +   S      +       +    A             D   +    
Sbjct: 343 LSTLASEVQQLNEKLNNSLNPTTVSFTGPYRRVDFIPAIEEAIG---RKLPDLQSENALS 399

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYP 253
            +        + +   ++   +  ++    +E  L     T +  +P   S    +  +P
Sbjct: 400 QVKEIFADLSLPLPAHESLPRLLDKLCSTYVESQLVD--PTFIMNHPECMSPLSKSYRHP 457

Query: 254 ADPRF-TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLA 311
            + +  + R EL+    E+ N  +E   P EQR +F+ ++  +     E    +DE +L 
Sbjct: 458 DNEQVVSARAELFVEGKEIMNMYEEENSPFEQRRKFQHQLSFR---DPENAGELDEGYLE 514

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L   +P + G   G DRL ML TGA  I++V+     +S
Sbjct: 515 TLEWGLPPTGGWGCGIDRLCMLFTGARRISDVLSFGNLRS 554


>gi|169632670|ref|YP_001706406.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase)(PoxA)
           [Acinetobacter baumannii SDF]
 gi|169151462|emb|CAP00211.1| putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(PoxA)
           [Acinetobacter baumannii]
          Length = 333

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 151/329 (45%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + + +R++F E   +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 21  DALKARAKLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQA-LRHINGKLQTQYLQ 79

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 80  TSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGLDLKALMHETADL 139

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   +    ++             P  ++   AF    +I       NP Q     L  
Sbjct: 140 LQTCLQHRFGEV------------RPFILSYKHAFQDRLDI-------NPLQATLKQLKD 180

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY--PADPR 257
            A + G+ +   D        +     EP+LG +    L  +P   ++LA +        
Sbjct: 181 TANRVGLNLDLGDDRLAYMDLLFSHFFEPSLGFDAPVFLTDFPPEMASLAKVKLDEDGEE 240

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+ K      P+DE  LA L  MP
Sbjct: 241 VAARFEVYIEGLELANAYDELLDSDVLRSRFEADNAERAKQGLHVMPLDEHLLAALPHMP 300

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+ T    I +VI  P
Sbjct: 301 ECSGIALGVDRLLMVATDQLKIEKVIAFP 329


>gi|226292377|gb|EEH47797.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 559

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 81/348 (23%), Positives = 141/348 (40%), Gaps = 22/348 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ I   +R +F    F+E+++  L    G     R F T     +   +PL L+
Sbjct: 212 DILRTRSAIIQYIRNFFFNRSFMEVETPILASVAGGAV-ARPFQT--CATEFPDRPLALR 268

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +K+F    ++RN      H PEFT  E+Y A+   E L+    ++
Sbjct: 269 IAPELWLKRLVVGGFDKVFEIGPSFRNEGLDNTHNPEFTTCEFYHAYADLETLISITESL 328

Query: 140 IRCAAEVANQKIFSFQN----VNCNPFSEPEYITVAEAFARYANIDLGT-TLDNPDQPDR 194
           +   ++  +    + Q+          +    +    A  +  +  L   T  +   P  
Sbjct: 329 LTGLSQHIHTLHQTIQSSLSLPPAPFTTPFRRLDFIPALEQAMSHKLPNLTPTSTHNPTT 388

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIY 252
            +  L        +  + T   + +R+    +EP       T++  +P   S    + I+
Sbjct: 389 QIHELFNNHLNQPLPSNPTLPRLLNRLSSIYLEPQCKE--PTLIINHPECLSPLSKSFIH 446

Query: 253 PADPR-FTKRFELYACNIELCNACDELLDPIEQRHRFEKE--MQEKKK------IYNETY 303
           P   +    R EL+  + E+ N  +E   P EQR +FE +  +Q K+             
Sbjct: 447 PQCGQVVAARAELFIDSREVMNMYEEENSPFEQRRKFEGQVGVQGKEMGCGVGSGEGGGK 506

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             DE +L  L   +P + G   G DRL ML TGA  I +V+     +S
Sbjct: 507 VGDESYLRALQWGLPPTGGWGCGVDRLCMLFTGARRIGDVLSFGNLRS 554


>gi|226952460|ref|ZP_03822924.1| lysyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836782|gb|EEH69165.1| lysyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 328

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 94/329 (28%), Positives = 145/329 (44%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  +   +R++F E   +E+++  L  +   + H+ +   +  I   +    YLQ
Sbjct: 16  EALKARAEMYKKIRQFFAERNVLEVETPILSQAGVTDVHLASVQVQRHIHGKLNTQ-YLQ 74

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF  K+LLA+G   I+     +R+ E G  H  EFTMLEWYR       LM +  ++
Sbjct: 75  TSPEFPMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPAMDLTALMHETADL 134

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +                           I       ++A  D      NP Q     L  
Sbjct: 135 LESCL-----------------AHRFGDIRPIVLSYKHAFQDRLDI--NPLQASLKQLKE 175

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF- 258
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +   +    
Sbjct: 176 TAHRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDKPVFLTDFPPEMASLAKVKQDEDGEL 235

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD      RFE + +++ +      P D+  LA L  MP
Sbjct: 236 VAARFEVYIEGLELANAYDELLDADVLASRFEADNRQRAEQGLPVIPTDQYLLAALPNMP 295

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+V    NI++VI  P
Sbjct: 296 ECSGIALGIDRLLMVVMNQVNIDKVIAFP 324


>gi|289621241|emb|CBI52024.1| unnamed protein product [Sordaria macrospora]
          Length = 598

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 150/377 (39%), Gaps = 37/377 (9%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +  +P +   + +   + R             L  R+ +   LR++  E  F+E  +  L
Sbjct: 170 LAPLPFK-LEDEEVRIQHRHVDMLVNRKTIDTLRLRSHLIKYLRDFLHERGFLEFQTPIL 228

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             S    T  R F+T    +  + K L ++ +PE   K+L+  G +K+F    A+RN   
Sbjct: 229 AESASGAT-ARPFTT-AASETSVNKNLAMRIAPELWLKRLVVGGVDKVFELGPAFRNEGI 286

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEFTM E+Y A+ + + L+     ++ C A    + + + +  +       +Y  
Sbjct: 287 DQTHNPEFTMCEFYNAYANLDDLIALTEELL-CGAAAHCRDLIATKLDSLPAIDMSQYQR 345

Query: 170 VAEAFARYANIDLGTTLDNPDQPD---RHLLYLQAQQAGIRVA----HDDTWSDIFSRIL 222
             +      +++     + P+      R  L    ++  I V      D T + +   + 
Sbjct: 346 PFQQLEFIPSLESALGFNLPNLAAPSAREELLALLREKNIDVPGLNKPDITLAKLLDNLA 405

Query: 223 IEKIEPNLGINCCTILDRYPAPESA---LANIYPADPRFTKRFELYACNIELCNACDELL 279
            E +EP   +     +  +P   S             R + R EL+    EL N  +E  
Sbjct: 406 AEFLEP-YSLTKPLFITHHPVCMSPLSKSFVCPKTGQRVSARTELFVNGKELANMYEEEN 464

Query: 280 DPIEQRHRFEKEM--QEKKKI--------YNETYPIDEDFLACLT-EMPQSSGIAMGFDR 328
           DP+ QR +F  ++   +++ +              +DE ++  L   +P + G   G +R
Sbjct: 465 DPVSQRAKFLDQLNTAKREGLAPGVYNEEGESAMEVDESYVQALESGLPPTGGWGCGIER 524

Query: 329 LVMLVTGANNINEVIWT 345
           +VML +G   I++ +  
Sbjct: 525 MVMLFSGTKRISDCLSF 541


>gi|71898269|ref|ZP_00680443.1| Lysine--tRNA ligase [Xylella fastidiosa Ann-1]
 gi|71732008|gb|EAO34065.1| Lysine--tRNA ligase [Xylella fastidiosa Ann-1]
          Length = 316

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 92/327 (28%), Positives = 148/327 (45%), Gaps = 21/327 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYL 78
             L  R  + + +R +F +   +E+++  L  +   E +I +F+T      D      +L
Sbjct: 5   DTLRLRARLNTMIRRFFADRGVLEVETPLLSAAGNTEPNIHSFTTCFTGHCDAGAAQRWL 64

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEFTMLEWYR    + +L ++   
Sbjct: 65  RTSPEYPLKRLLAAGIGDCYELGRVFRNGEAGGRHNPEFTMLEWYRVGWDHHRLAEETTA 124

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++R A  +  +                   T  + F    +ID         +       
Sbjct: 125 LVREALALVERTATLHVT------------TYRQLFLDILDIDPLRAPQTVLR------- 165

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
            QA   G       +  D    ++  +I+P    +  T++D +PA + ALA I    P  
Sbjct: 166 -QALDGGEINPDGLSRDDWLDLLMTHRIQPTFPTDRITVIDDWPATQCALARIRSDAPPV 224

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY    E+ N   EL D  EQR RFE + Q +        P+DE  L  L+ +P 
Sbjct: 225 AERFELYLGVHEIANGYHELNDATEQRRRFEHDNQVRAARGLPQMPLDEPLLNVLSRLPD 284

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWT 345
            +G+A+G DRL+M ++   +I +V+  
Sbjct: 285 CAGVAVGVDRLLMAMSATASIADVLAF 311


>gi|261188258|ref|XP_002620545.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239593292|gb|EEQ75873.1| lysyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 615

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 82/373 (21%), Positives = 138/373 (36%), Gaps = 47/373 (12%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ I   +R +F++  F+E+++  L    G     R F T         +PL L+
Sbjct: 243 DILRARSSIIQYIRTFFLDKSFMEVETPILASVAGGAV-ARPFETSATEF--PDRPLSLR 299

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGE------------------------------- 108
            +PE   K+L+  G +K+F    ++RN                                 
Sbjct: 300 IAPELWLKRLVVGGFDKVFEIGQSFRNEGKNSLPPYPGFFLPCNSREKQENNHLKLGVKS 359

Query: 109 --QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC---AAEVANQKIFSFQNVNCNPFS 163
                 H PEFT  E+Y A    E L+    +I           NQ + +      +  +
Sbjct: 360 TGLDKTHNPEFTTCEFYHAFADLETLISLTESIFTGLSQHVHNLNQTLPTLSPTTASFAA 419

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +             L      P +    ++    +Q       + T   +  R+  
Sbjct: 420 PFSRLDFIPDLEAAMGHKLPDFASTPTEEAAKIILDLFEQLHHPPPTNATLPRLLDRLSS 479

Query: 224 EKIEPNLGINCCTILDRYPAPESA--LANIYPADPRF-TKRFELYACNIELCNACDELLD 280
             +EP       T +  +P   S    + I+PA+ +  T R EL+    E+ N  +E   
Sbjct: 480 IYLEPQC--KNPTFIINHPECLSPLSKSFIHPANGQVVTARAELFVDKREMVNMYEEENS 537

Query: 281 PIEQRHRFEKEMQEKKKIYNETYP--IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
           P EQR +FE ++  + +   E     +DE ++  L   +P + G   G DRLVML TGA 
Sbjct: 538 PFEQRRKFEIQLGFQGQAVEEEGEGKMDESYVQALQWGLPPTGGWGCGVDRLVMLFTGAG 597

Query: 338 NINEVIWTPFSQS 350
            I +V+     +S
Sbjct: 598 RIGDVLSFGNLRS 610


>gi|289663145|ref|ZP_06484726.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 320

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 99/332 (29%), Positives = 161/332 (48%), Gaps = 21/332 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL-YL 78
             L  R  + +++R +F E   +E+++  L  +   E +I +FST          PL +L
Sbjct: 9   AALQLRAQLNAAIRAFFAERNVLEVETPVLSEAGNTEPNIESFSTRFTGHVDAGAPLRWL 68

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR   +   L ++ + 
Sbjct: 69  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNPEFSMLEWYRVGWNDRSLAQESIA 128

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++R A  +  ++                 +T  E F +   ID    L +P Q  R  L+
Sbjct: 129 LVRRALALVGREAAVQV------------LTYRELFLQTLRIDP---LRDPIQTLRAALH 173

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A           T  D    ++  +I+P    +  T++  +PA + ALA +   DP  
Sbjct: 174 DVAID-----PVGLTRDDWLDLLMTHRIQPGFASDTLTVVHDWPASQCALARVRNDDPPV 228

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY  + E+ N   EL D +EQR RF ++   +        P+DE  LA L+++P 
Sbjct: 229 AERFELYLGSFEVANGYHELNDALEQRARFVRDNAVRAARGLPQLPLDERLLAVLSQLPD 288

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+M + G   I +V+   F+ +
Sbjct: 289 CAGVAVGVDRLLMALRGTAQIADVLAFDFAHA 320


>gi|256823215|ref|YP_003147178.1| lysyl-tRNA synthetase-like protein GenX [Kangiella koreensis DSM
           16069]
 gi|256796754|gb|ACV27410.1| lysyl-tRNA synthetase-related protein GenX [Kangiella koreensis DSM
           16069]
          Length = 316

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 161/343 (46%), Gaps = 32/343 (9%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L  R ++ +++R +F E   +E+D+ +L +    + ++R+ + E+   
Sbjct: 4   WKPSASL---QNLKNRAVLMATVRHFFAERGVLEVDTPALSHHGVTDRYMRSMTAEVSS- 59

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
               +  +LQTSPE++ K+LLA G   I+    A+R  E G  H PEFTMLEWYR    +
Sbjct: 60  ---TESGFLQTSPEYAMKRLLADGSGSIYQICKAFRQDEVGAKHNPEFTMLEWYRLGFDH 116

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            QLM D   ++                       +   ++  +AF  + + D  +  D  
Sbjct: 117 FQLMDDVFELVS----------------EVLGLKKRRDLSYQQAFIEFLDFDPLSITD-- 158

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC-TILDRYPAPESAL 248
                  L L A+     + ++    D  S +  +KIEP LG+N     +  YPA ++AL
Sbjct: 159 -----EALELFARSNLGSLPNELERDDFLSLLFEDKIEPQLGLNGSVCFIYDYPASQAAL 213

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I   DPR   RFELY   IEL N   EL D  +Q  RFE +   +K        ID+ 
Sbjct: 214 ARISKLDPRVAHRFELYIEGIELANGFYELADSSQQLARFEADNSWRKNNGLAEIAIDQH 273

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           F+A L   +P  SG+A+G DRL+M+      I +VI  P+ ++
Sbjct: 274 FIAALEYGLPDCSGVALGLDRLLMIKLDTKEIQDVIAFPWDRA 316


>gi|289669580|ref|ZP_06490655.1| lysyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 320

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 94/332 (28%), Positives = 155/332 (46%), Gaps = 21/332 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL-YL 78
             L  R  + +++R +F E   +E+++  L  +   E +I +FST          PL +L
Sbjct: 9   AALQLRAQLNAAIRAFFAERNVLEVETPVLSEAGNTEPNIESFSTRFTGHVDAGAPLRWL 68

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR   +   L ++ + 
Sbjct: 69  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNPEFSMLEWYRVGWNDRSLAQETIA 128

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++R A  +  ++                 +T  E F +   ID             H + 
Sbjct: 129 LVRRALALVGREAAVQV------------LTYRELFLQTLRIDPLRDPIQTLSAALHDVA 176

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           +             T  D    ++  +I+P    +  T++  +PA + ALA +   DP  
Sbjct: 177 I--------DPVGLTRDDWLDLLMTHRIQPGFASDTLTVVHDWPASQCALARVRNDDPPV 228

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY  + E+ N   EL D  EQR RF ++   +        P+DE  LA L+++P 
Sbjct: 229 AERFELYLGSFEVANGYHELNDAQEQRARFVRDNAVRAARGLPQLPLDERLLAVLSQLPD 288

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+M + G   I +V+   F+ +
Sbjct: 289 CAGVAVGVDRLLMALRGTAQIADVLAFDFAHA 320


>gi|325110859|ref|YP_004271927.1| hypothetical protein Plabr_4332 [Planctomyces brasiliensis DSM
           5305]
 gi|324971127|gb|ADY61905.1| Uncharacterized protein YjeA [Planctomyces brasiliensis DSM 5305]
          Length = 343

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 100/345 (28%), Positives = 157/345 (45%), Gaps = 12/345 (3%)

Query: 11  NRDFHYR---RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE-L 66
           +    YR       L  R+ +    RE+F    + E+++  L      + H+  F+ +  
Sbjct: 6   DPSDLYRPAASLERLQARSRLVRETREFFHARGYWEVETPVLSAETVIDLHLDPFTADGS 65

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                     +LQTSPEF+ K+LL AG ++IF    A+R GE G LH PEFT+LEWY   
Sbjct: 66  FGLGSNEPTFFLQTSPEFAMKRLLTAGADRIFQVTRAFRQGEAGQLHNPEFTILEWYAVG 125

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
           E++   M     + R     A          +  P      +T A+AF +  +ID+ T  
Sbjct: 126 ETHFDQMAFVEQLCRHLFIAAG-------RGDALPEQAFSTLTYADAFQKALSIDVLTIS 178

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
               +       L   +   R+  ++   D+ + +L E +EP L       L  YP  ++
Sbjct: 179 LEELRQLTVARGLPDSEPNSRLTVEEQKDDLLNVLLAEVVEPELAKRSAVFLHDYPVSQA 238

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA   P+D R  +RFELY   +E+CN   EL D  E R R  ++ + + +      P +
Sbjct: 239 ALAQANPSDARVAERFELYLQGVEICNGYHELTDAAELRRRNRRQNELRAEAGLPRLPEN 298

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              L  +   MP SSG A+G DRL+ML  G   + +V+  P  ++
Sbjct: 299 SRLLEAMEAGMPASSGTAVGLDRLLMLALGCKRLQDVLAFPVDRA 343


>gi|77920084|ref|YP_357899.1| hypothetical protein Pcar_2490 [Pelobacter carbinolicus DSM 2380]
 gi|77546167|gb|ABA89729.1| truncated, possibly inactive, lysyl-tRNA synthetase(class II),
           putative [Pelobacter carbinolicus DSM 2380]
          Length = 304

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 116/330 (35%), Positives = 162/330 (49%), Gaps = 39/330 (11%)

Query: 16  YRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP 75
            ++R  L +R  I  ++R +FV   F+E+++      PGN       + +          
Sbjct: 9   AKKRTRLEQRARIVQTIRSFFVGRDFLEVETP--HRIPGNAPEAHIDAVQSD-------D 59

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
            +L TSPE   K+LLAAG  ++F     WR  E+G  H PEFTMLEWY A   Y  LM+ 
Sbjct: 60  WFLHTSPELCMKRLLAAGYPQLFQLCRCWRAAERGSRHLPEFTMLEWYAAGCDYHTLMEQ 119

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
           C +++   A +      +++    +     E +TV EAF RY ++ L   LD        
Sbjct: 120 CESLL---ATLLPGGNLTYRGQTIDLTPPWERLTVDEAFDRYGSLSLRQALDE------- 169

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                               D F  I+  +IEP LGI   T L  YPA  +ALA  +P  
Sbjct: 170 --------------------DRFDEIISFEIEPRLGIGKPTFLMEYPAELAALARRHPER 209

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           P   +RFELY   +EL NA  EL DP+EQR RF  E   ++      YP  E FL  L  
Sbjct: 210 PHVAERFELYIAGLELANAFSELTDPVEQRGRFVAEEAMRRDTGKPPYPSPEKFLRELEA 269

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           MP+++GIA+G DRLVML+TGA  I+E++  
Sbjct: 270 MPEAAGIALGVDRLVMLITGAETIDEIVAF 299


>gi|221134000|ref|ZP_03560305.1| lysyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 328

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 95/332 (28%), Positives = 157/332 (47%), Gaps = 25/332 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L +R  I + +R +F     +E+D   L      + H+  F T   + + +   LYLQ
Sbjct: 21  DNLRRRAAIIAQIRHFFAHLDVLEVDVPVLSQFGVTDPHLSNFVTPFTLGNKV-TSLYLQ 79

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPE+  K++LA+G   I+    ++R+ + G  H PEFTMLEWYR       LM +   +
Sbjct: 80  TSPEYGMKRMLASGSGCIYYMGKSFRHEDAGHQHNPEFTMLEWYRIGFDDHALMLEVDAL 139

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++                        + +T  EAF ++A+ID+     +       L+  
Sbjct: 140 LQGILNT----------------EPADKMTYHEAFLQFADIDINHANKD------DLIAA 177

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A      ++ + +   I   I    IEPN+G +    +  +PA ++ALA +   +P + 
Sbjct: 178 LAIDTHYDLSCE-SIEHILQLIFNLHIEPNIGGSRPCFVYDFPASQAALARLKADEPGYA 236

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
            RFE+Y   +EL N   EL DP EQ  RF K+ + + K+      ID   +A L   +P 
Sbjct: 237 HRFEVYYKGLELANGYWELTDPKEQAQRFAKDNRYRNKLGLPNTTIDTRLMAALNAGLPD 296

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+ML  G  +IN+V+     ++
Sbjct: 297 CAGVALGVDRLIMLALGKKHINDVLSFGIDRA 328


>gi|319787331|ref|YP_004146806.1| lysyl-tRNA synthetase-related protein GenX [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465843|gb|ADV27575.1| lysyl-tRNA synthetase-related protein GenX [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 325

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 93/333 (27%), Positives = 155/333 (46%), Gaps = 22/333 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL-YL 78
             L  R  + + +R +F E + +E+++  L  +   E +I +FST           + +L
Sbjct: 13  EALRLRARLYALVRAFFAEREVLEVETPILLEAGNTEPNIESFSTRFTGHRSAGAEVRWL 72

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+L+AAG    +     +RNGE G  H PEF+MLEWYR    + +L  + + 
Sbjct: 73  RTSPEYPLKRLVAAGIGDCYELGRVFRNGEAGGRHNPEFSMLEWYRVGWDHLRLADETVE 132

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++R A  +                +E    T  + +   A +D       P Q     L 
Sbjct: 133 LVRAALALVG------------RDAEVRSTTYRQLYLEVAGVD-------PFQASEAELR 173

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
            +     I         D    ++  +I+P+   +  T++  +PA + ALA I   DP  
Sbjct: 174 ARLDGVAID-PEGLNRDDWLDLLMTHRIQPSFAPDRITVVHDWPASQCALARIRAGDPPV 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFELY   +EL N   EL +  EQR RFE++ + +        P+DE  LA L   MP
Sbjct: 233 AERFELYLGPLELANGYHELTEATEQRARFERDGRVRAGRGTVQPPVDERLLAALQAGMP 292

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +G+A+G +RL+M +     I +V+   F+++
Sbjct: 293 DCAGVALGIERLLMALAATTRIADVLAFDFARA 325


>gi|294649748|ref|ZP_06727153.1| lysine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824357|gb|EFF83155.1| lysine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 328

 Score =  219 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 94/329 (28%), Positives = 144/329 (43%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  +   +R +F E   +E+++  L  +   + H+ +   +  I   +    YLQ
Sbjct: 16  EALKARAEMYKKIRHFFAERNVLEVETPILSQAGVTDVHLASVQVQRHIHGKLNTQ-YLQ 74

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF  K+LLA+G   I+     +R+ E G  H  EFTMLEWYR       LM +  ++
Sbjct: 75  TSPEFPMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPAMDLTALMHETADL 134

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +                           I       ++A  D      NP Q     L  
Sbjct: 135 LESCL-----------------AHRFGDIRPIVLSYKHAFQDRLDI--NPLQASLKQLKE 175

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF- 258
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +   +    
Sbjct: 176 TAHRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDKPVFLTDFPPEMASLAKVKQDEDGEL 235

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD      RFE + +++ +      P D+  LA L  MP
Sbjct: 236 VAARFEVYIEGLELANAYDELLDADVLASRFEADNRQRAEQGLPVIPTDQYLLAALPNMP 295

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+V    NI++VI  P
Sbjct: 296 ECSGIALGIDRLLMVVMNQVNIDKVIAFP 324


>gi|149173839|ref|ZP_01852468.1| lysyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148847369|gb|EDL61703.1| lysyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 347

 Score =  219 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 102/341 (29%), Positives = 156/341 (45%), Gaps = 18/341 (5%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII----QDHIRKP 75
             L +R+ +  ++R +F    + E+++  L      + +I  F T         D+  +P
Sbjct: 15  ETLQQRSQLLRAIRTFFESRGYWEVETPLLSRDTVVDAYIDPFLTHWHAAEGTTDNPGEP 74

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
            YLQTSPEF+ K+LLAAG ++I+   HA+R  E+G  H PEF MLEWYR  E++   M  
Sbjct: 75  RYLQTSPEFAMKRLLAAGADQIYQITHAFRQAERGERHNPEFAMLEWYRRGETHHDQMTF 134

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
              ++R     A     S ++               +AF ++A +       +       
Sbjct: 135 VEALVRDVYAEAATVTDSNRHSELPD-QPFTRYAYEDAFLQFAGL-------SALNATAE 186

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSR---ILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                A+Q  I V  D   +D  S    +L+E IEP LG      +  YPA ++ALA I 
Sbjct: 187 EFRQTAEQHSISVPADFDTTDCLSWQNLLLVELIEPALGEKGAVFIYDYPASQAALARIR 246

Query: 253 PAD--PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             D      +RFELY   +E+CN   EL D  E R R  ++   +K+      P +   L
Sbjct: 247 QEDGSAGVAERFELYLQGVEICNGYHELTDAAELRTRIRQQSDIRKREKRPALPAESYLL 306

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +   +P  +G A+G DRL ML  G   + EVI  P  ++
Sbjct: 307 QAMEAGLPACAGTALGLDRLFMLALGKQTLQEVIAFPVERA 347


>gi|78223046|ref|YP_384793.1| tRNA synthetase, class II (D, K and N) [Geobacter metallireducens
           GS-15]
 gi|78194301|gb|ABB32068.1| tRNA synthetase, class II (D, K and N) [Geobacter metallireducens
           GS-15]
          Length = 307

 Score =  219 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 123/334 (36%), Positives = 174/334 (52%), Gaps = 37/334 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
              RR   L  R  I   +R +F+E  ++E+++     +   E+HI     +        
Sbjct: 6   RLARRHGALRARARIIQEIRRFFIEGGYLEVETPLRIPACAPESHIDPVPADG------- 58

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
              +LQTSPE   K++LAAG E++F  +H WR GE+G +H PEFTMLEWYRA   Y  +M
Sbjct: 59  --WFLQTSPEICMKRMLAAGYERLFQISHCWRAGERGRMHVPEFTMLEWYRAGTDYRGVM 116

Query: 134 KDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            +   +IR  AE A      SF+    +  +  E ITV +AF RY  I +   L+     
Sbjct: 117 DETELLIRFVAEGAGFGGPLSFRGKEIDITAVWERITVRDAFVRYGGITMDEALER---- 172

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                                  DIF  +++E+IEP LGI   T +  YP+  SALA + 
Sbjct: 173 -----------------------DIFDEMMVEQIEPRLGIGRPTFIHDYPSCRSALARLK 209

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             DP   +RFELY   +E+ NA  EL DP+EQR RFE E   +      + P+ E FLA 
Sbjct: 210 KDDPAVAERFELYLGGVEIANAFSELTDPVEQRARFESENAFRTSRGQTSTPLPEKFLAE 269

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           LT MPQ++GIA+G DRLVM++  A+ I++V+  P
Sbjct: 270 LTAMPQAAGIALGIDRLVMVLLDADTIDDVVAFP 303


>gi|27904999|ref|NP_778125.1| lysyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|46396878|sp|Q89A27|SYK3_BUCBP RecName: Full=Uncharacterized protein YjeA
 gi|27904397|gb|AAO27230.1| putative lysyl-tRNA synthetase [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 322

 Score =  219 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 98/345 (28%), Positives = 149/345 (43%), Gaps = 31/345 (8%)

Query: 8   PWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI 67
             W      +    L +R  I   +R YF     +E+++  L      + +   F T+L 
Sbjct: 5   YLWKSSALLKN---LHRRAKIIFEIRNYFFNLGILEVETPILSNYSVTDVNFIPFKTKLQ 61

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAH 126
           I    +K ++L  SPE+  K+LL      I+  + ++RN    G  H PEFTMLEWY  +
Sbjct: 62  IT---KKRMWLVPSPEYHMKRLLVQNIGAIYQISRSFRNNEFGGPYHNPEFTMLEWYSPY 118

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
            +    MK     +    +V   K  S+Q                    +Y NID     
Sbjct: 119 CNMFDFMKKVEKFLVFCLKVVQVKYISYQRAFI----------------KYLNIDPL--- 159

Query: 187 DNPDQPDRHLLYLQAQ-QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                  R LL L  + +    ++  D+ S +   +   KIEPNL       +  YPA +
Sbjct: 160 ---LAKKRELLDLINKFKFNHLISDCDSISTLLEILFTLKIEPNLNNKKLIFVYHYPADQ 216

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           + LA I   D R + RFE++   +EL N   EL D  E   RF+    +++     +  +
Sbjct: 217 AILAAINDNDSRVSDRFEVFFKGVELGNGFYELTDQAEHIRRFKLNNIQRRHKGICSVEV 276

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           D+ FL  L+  +P  SGIA+G DRL+ML      INEVI  P  +
Sbjct: 277 DQFFLKSLSRGLPPCSGIAIGLDRLIMLSLNLKTINEVIAFPIER 321


>gi|262379362|ref|ZP_06072518.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|262298819|gb|EEY86732.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 333

 Score =  219 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 99/329 (30%), Positives = 153/329 (46%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R  + + +R++F E   +E+++  L  +   + H+ + S +  ++  ++   YLQ
Sbjct: 21  EVMRARATMYTQIRQFFAERNVLEVETPVLSQAGVTDVHLASVSAQRHVEGKLQIH-YLQ 79

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR   S   LM +   +
Sbjct: 80  TSPEFTMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGFSLLDLMHETTAL 139

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +         ++             P  I+   AF    +I       NP Q    LL  
Sbjct: 140 LNICLVQRFGEM------------RPVVISYKHAFQDRLDI-------NPLQASVKLLKD 180

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF- 258
            A + GI +   D        +    +EP+LG +    L  +P   ++LA +   +    
Sbjct: 181 TANRLGINLDLGDDRLAYIDLLFSHFVEPSLGFDAPVFLTDFPPELASLAKVKTDEDGEQ 240

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFELY   +EL NA DEL+D    R RFE +  E+  +     PIDE+ L  L  MP
Sbjct: 241 VAARFELYIEGLELANAYDELIDSKVLRERFEADNTERCTLGLPVMPIDENLLTALQYMP 300

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+ T    +  VI  P
Sbjct: 301 ECSGIALGIDRLLMIATRQMRLENVITFP 329


>gi|296114566|ref|ZP_06833219.1| lysyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978922|gb|EFG85647.1| lysyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 339

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 128/339 (37%), Positives = 180/339 (53%), Gaps = 16/339 (4%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
            + D    R   L +R ++   +R +F    ++E+++     +PG E H++ F TE    
Sbjct: 9   GDPDRIAERLALLRRRGLVVRGVRAFFEGRGYLEVETPYAVPTPGEEVHLKVFRTEQHRP 68

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
           D   +PL+L TSPEF+ K+++AA    +F  A  WRN E   LH  EFTMLEWYR H S 
Sbjct: 69  DGTVRPLFLHTSPEFAMKRIVAATHLPVFQMARVWRNAEGSRLHAHEFTMLEWYRPHASL 128

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             LM +   ++R                        E +T+A+AFARYA +DL  T D+ 
Sbjct: 129 SDLMDETEALLRAILPPV----LPGAASRVAMTPPFERLTMADAFARYAGLDLLATGDD- 183

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                      AQ A   +   ++W D+F R+L+E+IEP++G  C T L  +PA ++ALA
Sbjct: 184 -------ATALAQAARCDLRAGESWEDLFFRLLMERIEPHIGRTCPTFLTHWPASQAALA 236

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK--IYNE--TYPI 305
              PADPR   RFELYA  IEL NA +EL DP+EQ  RF  +   +      +   T+P+
Sbjct: 237 RRDPADPRVALRFELYADGIELANAFEELTDPVEQEARFMADRARRADLYGDDPQATWPM 296

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           D  FLA +  MP   GIA+G DRLVML  G   I +V+W
Sbjct: 297 DHAFLAAVGNMPSCVGIALGLDRLVMLAAGTRRIEDVLW 335


>gi|257454948|ref|ZP_05620196.1| putative lysyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447658|gb|EEV22653.1| putative lysyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 321

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 93/330 (28%), Positives = 152/330 (46%), Gaps = 25/330 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
             R  + +++R++F E Q +E+ +  +  +   +  +++ S+ + + DH     YL TSP
Sbjct: 15  QARAAMYATIRQFFAERQVLEVQTPVMSQAGNTDIFLQSVSSNVTVSDH-PTTYYLHTSP 73

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
           EF+ K+LLAA +  ++     +R+ E G  H  EFTMLEWYR + S ++L K+  +++  
Sbjct: 74  EFAMKRLLAAWQVPMYQICPVFRDNEIGSRHNIEFTMLEWYRPNFSLDELAKETNDLVSA 133

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
              V    +        + F +   I                    P       L   A+
Sbjct: 134 ---VLGYPVIFDHYRYVDAFMDFVKIH-------------------PFNASCDTLKAIAK 171

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRFTK 260
             G+ +   +        +    +EPNLG    T++  YP   +A           R  +
Sbjct: 172 DNGLNIDLGEDHQGWLDLLFSHLVEPNLGKALPTLIYDYPVATAALAKTVTDKDGNRVAR 231

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   +E+ NA DEL D    R RF+++   +KK      PIDE+ LA    +P  S
Sbjct: 232 RFELYINGLEIANAYDELADGQALRLRFDEDNVARKKRGLPVMPIDENLLAACDALPACS 291

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           GIA+G DRL+M+ TG  +I +VI  P   +
Sbjct: 292 GIALGIDRLLMIKTGKTHIRDVIALPTPHA 321


>gi|262376604|ref|ZP_06069832.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262308314|gb|EEY89449.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 333

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 97/347 (27%), Positives = 151/347 (43%), Gaps = 27/347 (7%)

Query: 9   WWNRDFHYRRRPF-----LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           WW        +P      +  R  +   +R++F E   +E+++  L  +   + H+ +  
Sbjct: 5   WWAEGMTMTYQPTCDLQAMRARATLYRQIRQFFAERDVLEVETPILSQAGVTDVHLASVQ 64

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
            +  +   +    YLQTSPEF+ K+LLA+G   I+     +RN E G  H  EFTMLEWY
Sbjct: 65  AQRHVLGKLNTH-YLQTSPEFAMKRLLASGSGPIYQICKVFRNDEHGRKHNSEFTMLEWY 123

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           R   S + LM +  +++    +                      I       ++A +D  
Sbjct: 124 RPGFSLKDLMFEVSDLLNVTLKA-----------------RFGEIRPTILSYKHAFMDRL 166

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
               NP Q     L    ++ G+ +   +        +    +EP+LG +    L  +P 
Sbjct: 167 DL--NPLQATLQELKDCCRRVGLSLDLGNDRLGYIDLLFSHMVEPSLGFDTAVFLTDFPP 224

Query: 244 PESA--LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
             ++     I         RFELY   +EL NA DEL+D    R RFE +  E+ K+   
Sbjct: 225 EMASLAKTRIDEDGELVAARFELYIEGLELANAYDELIDADVLRSRFEADNAERAKLGLH 284

Query: 302 TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             PIDE  LA L  MP+ SGIA+G DRL+M+ T    + +VI  P  
Sbjct: 285 VMPIDEYLLAALPNMPECSGIALGIDRLLMIATNQMKLEQVISFPAD 331


>gi|254447293|ref|ZP_05060760.1| lysyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198263432|gb|EDY87710.1| lysyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 331

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 101/343 (29%), Positives = 151/343 (44%), Gaps = 20/343 (5%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L  R  I   +R +F E   +E+++ SL  +   + H+ ++  E    
Sbjct: 7   WQPSASI---EALRHRARILQGIRAFFDERGVLEVNTPSLSRAATTDVHLDSYRVETD-- 61

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
                P YL TSPE   K+LLAAG    +     +R  EQG  H PEFT+LEWYR   S 
Sbjct: 62  ---SGPRYLHTSPELPMKRLLAAGVGDCYQLCAVFRPSEQGRYHNPEFTLLEWYRTAYSI 118

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + L+ +   +IR    +A        N           +  ++AF     +      ++ 
Sbjct: 119 DDLIVETAALIRALLPLA-----PADNSALPADLPLVSVRYSDAFKARLGLCPLAATEHE 173

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
            Q   H   L +++ GI              +  + +  +      T +  YPA ++ALA
Sbjct: 174 LQTLLHDNGLWSKEQGILPKDSA-----LDLLFSQAVSRHFPERQLTAVTHYPASQAALA 228

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
            + P DP   +R ELY   +EL N   EL D  EQR RFE + +E+K       P+DE F
Sbjct: 229 QLTPDDPATAQRSELYWGQVELANGFKELTDADEQRARFEADNRERKAKGLIEQPMDECF 288

Query: 310 LACLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           L  L    MP  SGIA+G DRL+M +  A+ I  V+    S++
Sbjct: 289 LQALKQGGMPDCSGIALGVDRLMMKLLDADQIQAVMAFDASRA 331


>gi|255320355|ref|ZP_05361539.1| tRNA synthetase class II [Acinetobacter radioresistens SK82]
 gi|255302550|gb|EET81783.1| tRNA synthetase class II [Acinetobacter radioresistens SK82]
          Length = 324

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 99/329 (30%), Positives = 153/329 (46%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R  + + +R++F E   +E+++  L  +   + H+ + S +  ++  ++   YLQ
Sbjct: 12  EVMRARATMYTQIRQFFAERNVLEVETPVLSQAGVTDVHLASVSAQRHVEGKLQIH-YLQ 70

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR   S   LM +   +
Sbjct: 71  TSPEFTMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGFSLLDLMHETTAL 130

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +         ++             P  I+   AF    +I       NP Q    LL  
Sbjct: 131 LNICLVQRFGEM------------RPVVISYKHAFQDRLDI-------NPLQASVKLLKD 171

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF- 258
            A + GI +   D        +    +EP+LG +    L  +P   ++LA +   +    
Sbjct: 172 TANRLGINLDLGDDRLAYIDLLFSHFVEPSLGFDAPVFLTDFPPELASLAKVKTDEDGEQ 231

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFELY   +EL NA DEL+D    R RFE +  E+  +     PIDE+ L  L  MP
Sbjct: 232 VAARFELYIEGLELANAYDELIDSKVLRERFEADNTERCTLGLPVMPIDENLLTALQYMP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+ T    +  VI  P
Sbjct: 292 ECSGIALGIDRLLMIATRQMRLENVITFP 320


>gi|152994944|ref|YP_001339779.1| lysyl-tRNA synthetase-like protein GenX [Marinomonas sp. MWYL1]
 gi|150835868|gb|ABR69844.1| lysyl-tRNA synthetase-related protein GenX [Marinomonas sp. MWYL1]
          Length = 320

 Score =  219 bits (557), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 94/344 (27%), Positives = 147/344 (42%), Gaps = 28/344 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L KR  +  ++R +F   + +E+D+  L      + HI    T     
Sbjct: 2   WQPSADL---SILQKRAQLLKAIRAFFDTREVMEVDTQCLSLGSITDPHIE-VLTSKTRS 57

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
                  YLQTSPEF+ K+LL AG   I+     +R  E G  H  EFTMLEWYR    +
Sbjct: 58  QGEDLIYYLQTSPEFAMKRLLCAGSGSIYQLGKVFRAEEIGRRHSIEFTMLEWYRVGFDH 117

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            QLM +  ++++     A+                 E ++   AF R+  +D       P
Sbjct: 118 WQLMDEIQDLLKELLNDASLTC--------------ERLSYQMAFLRHTGLD-------P 156

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                  L   A Q       +D    +   +    +EP +G      +  YPA ++ALA
Sbjct: 157 FTATLFQLQECAHQHTEYGLQEDDRDTLLELLFSSVVEPAIGKYVPCFIHSYPASQAALA 216

Query: 250 NIYPADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
             +  +       RFELY   +EL N   EL D  EQ  RF ++ + +K++       DE
Sbjct: 217 KTHRDEKGLLVAARFELYWQGMELANGYHELTDAKEQARRFAEDKETRKQMRLANRQFDE 276

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +  L   +P  +G+A+G DRL+ML+   ++I EV+    S++
Sbjct: 277 RLITALENGLPDCAGVALGVDRLLMLICHKSHIAEVLPFAHSRA 320


>gi|50085733|ref|YP_047243.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase)(PoxA)
           [Acinetobacter sp. ADP1]
 gi|49531709|emb|CAG69421.1| putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(PoxA)
           [Acinetobacter sp. ADP1]
          Length = 329

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 93/329 (28%), Positives = 144/329 (43%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  +  ++R +F E   +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 17  EALQARAKLYQTIRTFFAERGVLEVETPIISQAGVTDVHLASVKA-LRHIEGKERTQYLQ 75

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 76  TSPEFAMKRLLASGSGPIYQLCKVFRDDEHGRKHNSEFTMLEWYRPEFDLKDLMHETADL 135

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +                         + I       ++A  D      NP Q     L  
Sbjct: 136 LETCL-----------------KQRFDEIRPMILSYKHAFQDRLEI--NPLQATLKQLKD 176

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPR 257
            A + G+ +   +        +    +EP+LG +    L  +P   ++     I      
Sbjct: 177 TADRVGLNLDLGNDRLAYIDLLFSHIVEPSLGFDTPVFLTDFPPEMASLAKVRIDEDGEE 236

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+K       P+DE+ LA L  MP
Sbjct: 237 VAARFEVYIEGLELANAYDELLDANILRARFEADNLERKLQGLAEMPLDENLLAALPHMP 296

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +GIA+G DRL+M+ T    I +VI  P
Sbjct: 297 ACAGIALGVDRLLMIATRQLKIEQVIAFP 325


>gi|293609902|ref|ZP_06692204.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828354|gb|EFF86717.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 333

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 152/329 (46%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + S +R++F E   +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 21  DALKARAKLYSQIRQFFAERDVMEVETPIVSQAGVTDVHLASVQA-LRHINGKLQTQYLQ 79

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 80  TSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGLDLKALMHETADL 139

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   +    ++             P  ++   AF    +I       NP Q     L  
Sbjct: 140 LQTCLQHRFGEV------------RPFILSYKHAFQDRLDI-------NPLQATLKQLKD 180

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF- 258
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +   +    
Sbjct: 181 TANRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDAPVFLTDFPPEMASLAKVKVDEDGEE 240

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+ K      P+DE  LA L  MP
Sbjct: 241 VAARFEVYIEGLELANAYDELLDADVLRSRFEADNAERAKQGLHVMPLDEHLLAALPHMP 300

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+      I +V+  P
Sbjct: 301 ECSGIALGIDRLLMVAMDQVKIEKVVTFP 329


>gi|261880136|ref|ZP_06006563.1| lysine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333191|gb|EFA43977.1| lysine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 320

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 68/254 (26%), Positives = 105/254 (41%), Gaps = 11/254 (4%)

Query: 103 AWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNP 161
            +RN      H PEFT +E Y  ++ Y  +M     ++                    + 
Sbjct: 1   NFRNEGMDKFHNPEFTCMELYVQYKDYNWMMSFTERLLETICVAVNGTTEVKNGEHVISF 60

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSR 220
            +    + + +A       DL       D+ +  +  +      +  V        +   
Sbjct: 61  KAPYRRLPILDAIKEKTGFDLS------DKTEEEIYKIAKDDLKLESVDETFGKGKLIDE 114

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           I  E  E        T +  YP   S L  ++ + P  T+RFEL     E+ NA  EL D
Sbjct: 115 IFGEFCEGT--FIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKEVANAYSELND 172

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
           P++Q  RF  +M+   K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG  NI
Sbjct: 173 PLDQEQRFIDQMKLADKGDDEAMIIDQDFLRALQYGMPPTSGIGIGIDRLVMLMTGQPNI 232

Query: 340 NEVIWTPFSQSNQE 353
            EV+  P  +  ++
Sbjct: 233 QEVMPFPQLKPEKK 246


>gi|116182572|ref|XP_001221135.1| hypothetical protein CHGG_01914 [Chaetomium globosum CBS 148.51]
 gi|88186211|gb|EAQ93679.1| hypothetical protein CHGG_01914 [Chaetomium globosum CBS 148.51]
          Length = 587

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/364 (21%), Positives = 136/364 (37%), Gaps = 33/364 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            + R R  L  R+ +   LR++  E  F+E  +  L    G   + R F+        I 
Sbjct: 188 VNPRTRDILRLRSYLTKYLRDFLHERDFLEFQTPILAGDAGGA-NARPFTVSAKT---IS 243

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
           + + L+ +PE   K+L+  G +++F    A+RN      H PEFT+ E+Y A+ + + L+
Sbjct: 244 RDVSLRIAPELWLKRLVVGGVDRVFELGPAFRNEGIDQTHNPEFTICEFYHAYANLQDLI 303

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
               ++IR  A    Q + S +     P   P +    +      +++       P    
Sbjct: 304 SLTEDLIRG-AAAHCQNLISTKLSTLPPIDLPAFERPFQQAEFIPSLEESLGFTLPTLTS 362

Query: 194 RHLLYL---QAQQAGIRVAHD----DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
              L       +Q  I +          + +   +    IEP         +  +P   S
Sbjct: 363 PTALPDLLSLLKQHNIPLDQTAASAPDLAHLLDHLAATYIEPRSAHAPL-FITHHPVCMS 421

Query: 247 A---LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI----- 298
                          + R EL+    EL N  +E  DP EQR +F +++  K K      
Sbjct: 422 PLSKSFTCPRTGQAVSARTELFMAGRELANMYEEENDPFEQRRKFAEQLAAKTKGKAADV 481

Query: 299 --------YNETYP---IDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                            IDE ++  L + +P + G   G +RLVML  G   I + +   
Sbjct: 482 SGGGDGDVGEPASDGGAIDESYVRALASGLPPTGGWGCGVERLVMLFGGTRRIGDCLSFG 541

Query: 347 FSQS 350
             ++
Sbjct: 542 TLRN 545


>gi|325922520|ref|ZP_08184281.1| lysyl-tRNA synthetase (class II) [Xanthomonas gardneri ATCC 19865]
 gi|325546985|gb|EGD18078.1| lysyl-tRNA synthetase (class II) [Xanthomonas gardneri ATCC 19865]
          Length = 320

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/332 (28%), Positives = 159/332 (47%), Gaps = 21/332 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL-YL 78
             L  R  + + +R +F E   +E+++  L  +   E +I +FST          PL +L
Sbjct: 9   AALQLRARLNAVIRAFFAERGVLEVETPVLSEAGNTEPNIDSFSTRFSGHVDAGAPLRWL 68

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR       L ++ + 
Sbjct: 69  RTSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNPEFSMLEWYRVGWDDRALAQETIA 128

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++ A  +                +  + ++  + F +   ID    L +P +  R  L+
Sbjct: 129 LVQQALALV------------QRQARVQALSYRDLFLQQLGIDP---LLDPIETLRAPLH 173

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A           T  D    ++  +I+P+   +  T++  +PA + ALA I    P  
Sbjct: 174 DIAID-----PAGLTRDDWLDLLMTHRIQPSFASDTLTVVHDWPASQCALARIRHDSPPV 228

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY    E+ N   EL D  EQR RF ++   +     +  P+DE  LA L+++P 
Sbjct: 229 AERFELYLGAYEVANGYHELNDAQEQRARFLRDNAVRAARGLQQLPLDERLLAVLSQLPD 288

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +G+A+G DRL+M + G   I +V+   F+++
Sbjct: 289 CAGVAVGVDRLLMALRGTAQIADVLAFEFARA 320


>gi|213409495|ref|XP_002175518.1| lysyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003565|gb|EEB09225.1| lysyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 541

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 85/332 (25%), Positives = 149/332 (44%), Gaps = 15/332 (4%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             + KR    SSLR+YF E+ ++E+++  L    G     R F       D    PL ++
Sbjct: 213 DHIRKRFQTISSLRKYFTEHDYLEVETPVLSRHFGGAA-ARPFK----STDIHGSPLSMR 267

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+ +G ++IF     +RN      H PEFT  E Y A+ + E+L +  +++
Sbjct: 268 CAPEIWLKQLVISGFDRIFEVGKCFRNEGIDATHNPEFTSCEIYTAYSNLEELQEMTVDV 327

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +R      N  +    +         + ++   A  +    +L    ++     R  L  
Sbjct: 328 LRFIFHQVNGSLQVPNSKLTLES--FQSVSFLPALEKALGEELPVIDESDHC--REALRH 383

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY----PAPESALANIYPAD 255
              +    +    T S +   +  + + P+       ++       P  +S    +    
Sbjct: 384 IFNKLQQALPQIQTTSKMLDELADQFLIPSFQGKPTFLMYHPEVLAPLAKSQSFILSSRQ 443

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI-DEDFLACL- 313
            R + RFELY   IELCNA +E  DP EQR +F +++++K    NE   + DED++  + 
Sbjct: 444 QRVSLRFELYINGIELCNAYEEENDPDEQRRKFLQQVEKKDAFPNEDIVLPDEDYVNAMQ 503

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             +P ++G  +G DRL MLV GA  IN+++  
Sbjct: 504 YGLPPTAGWGIGVDRLCMLVAGATRINQILPF 535


>gi|308273517|emb|CBX30119.1| hypothetical protein N47_D29280 [uncultured Desulfobacterium sp.]
          Length = 313

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 112/335 (33%), Positives = 166/335 (49%), Gaps = 40/335 (11%)

Query: 12  RDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH 71
           R  H ++   L  R+ I   +R +F E  ++E+++     +P  E +I A          
Sbjct: 13  RQTHIKKN--LQLRSEIIQLIRLFFSEQNYLEVETPCRISAPAPEAYIEAIE-------- 62

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +  +LQTSPE   K+L+++G  KIF     +R  E+G  H PEFTMLEWY  +  Y  
Sbjct: 63  -SENYFLQTSPELYMKRLISSGYPKIFQICRCFRQNERGAKHIPEFTMLEWYCINSDYFY 121

Query: 132 LMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +M +C  +I+  A     +    +Q  + +       ITV+EAF +YA + +   +    
Sbjct: 122 MMNECEALIKYVACKLGFENSIIYQGESISIDKPWNRITVSEAFDKYACVSMEKVVA--- 178

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                                   + +F    I +IEP LG +  T +  YPA   ALA 
Sbjct: 179 ------------------------AGLFDE-TIAEIEPKLGTDVPTFIYDYPASCGALAK 213

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
           +  +D    +RFELY   IELCNA  EL DP EQR RFEKE++ +KK   + YP+ E FL
Sbjct: 214 LKSSDNLLAERFELYISGIELCNAFTELTDPEEQRKRFEKELEHRKKAGLKKYPMPEKFL 273

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             L+ MP++SG A+G DRLVML      I++V+  
Sbjct: 274 ESLSYMPKTSGNALGLDRLVMLFADTEIIDDVVAF 308


>gi|260946261|ref|XP_002617428.1| hypothetical protein CLUG_02872 [Clavispora lusitaniae ATCC 42720]
 gi|238849282|gb|EEQ38746.1| hypothetical protein CLUG_02872 [Clavispora lusitaniae ATCC 42720]
          Length = 545

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 69/349 (19%), Positives = 134/349 (38%), Gaps = 17/349 (4%)

Query: 11  NRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD 70
           + +   R    +  +  I  ++R++   + F+E+ +  L  + G   +   F T+     
Sbjct: 199 DPESRQR----IKVKGAITKAIRDFLHNDGFLEVQTPILAGN-GTGANAEPFQTKSKAIS 253

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
              + L L+ +PE   KKL+  G +K+F     +RN      H PEF   E+YR+  S  
Sbjct: 254 --DEKLSLRVAPELWLKKLVIGGFDKVFEIGSNFRNEGIDSTHNPEFLTCEFYRSFTSLP 311

Query: 131 QLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           +LMK   ++     +++ N +  S                    F     I+  T    P
Sbjct: 312 ELMKMTEDMFSFIHSQLLNHETSSTFLRERLRKLSSFQEGNFPKFEFIPTIESRTGHQMP 371

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY-------P 242
                  L    ++ G+++  + + + +   +    +E          +  Y       P
Sbjct: 372 VNFTTEALLEYYKKIGVKLPENKSPASLLDNLSAIYLESLSVDKPDVPIFIYNQPSVMSP 431

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ-EKKKIYNE 301
             +S            + RFEL+    E  N+ +E   P EQ  +F+ +   +K     E
Sbjct: 432 LAKSTGVVYGDRCYDISLRFELFINGREYVNSYEEENSPFEQAEKFKLQQACKKDFNDME 491

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +   D +++  +   +P + G   G DRL ML + +N I +V+     +
Sbjct: 492 SLIPDWNYVKQMEYGLPPTGGWGCGIDRLSMLFSDSNRIEDVLTFGTLR 540


>gi|189197277|ref|XP_001934976.1| lysyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187980924|gb|EDU47550.1| lysyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 615

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/371 (21%), Positives = 144/371 (38%), Gaps = 34/371 (9%)

Query: 1   MHQIPSQPWWNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +H +P +   + +   RR              L  R +I   +R YF+++ F+E+++ + 
Sbjct: 250 LHHLPEKID-DAETLARRPHIHALTSDEPGDVLRLRALIYDYVRTYFIQSGFLEVETPTF 308

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             + G     R F T  +  +    P+ L+ +PE + K+L+  G++KIF     +RN   
Sbjct: 309 DVNAGGAI-ARPFET--VANELSNTPIRLRIAPELNLKRLIIGGQDKIFEIGRVFRNEGV 365

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEF+  E+Y    +   ++     ++            ++        + PE I 
Sbjct: 366 DNTHNPEFSTCEFYEVGATLPTVVARTEQLVHGLHTAIESLRSTY----FPTLAAPEDID 421

Query: 170 VAEAFARYANIDLGTTLDNPDQPDR------HLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               FA+   I           PD         L     +  + +  + T   +   +  
Sbjct: 422 FTHPFAQLPFIPTIEKSCGRTLPDLSSPNASEELLQLFNELDLAIPPNPTLPRLLDALAE 481

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPAD---PRFTKRFELYACNIELCNACDELLD 280
             IEP       T + ++P   S L+  +  +    R   R EL+    E  NA +E   
Sbjct: 482 MYIEPLC--KNPTFITQHPEALSPLSKSFVDEATGQRVASRVELFIHGREYVNAYEEENS 539

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P EQR +F +++    +       IDE +L  L   MP + G   G DRLVML      I
Sbjct: 540 PFEQRRKFMQQLDFHTEGGG---AIDESYLEALEWGMPPTGGWGCGLDRLVMLFASKKRI 596

Query: 340 NEVIWTPFSQS 350
            +V+     ++
Sbjct: 597 ADVLPFGTLRN 607


>gi|197118436|ref|YP_002138863.1| lysine adenylyltransferase [Geobacter bemidjiensis Bem]
 gi|197087796|gb|ACH39067.1| lysine adenylyltransferase [Geobacter bemidjiensis Bem]
          Length = 302

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 121/330 (36%), Positives = 170/330 (51%), Gaps = 39/330 (11%)

Query: 16  YRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP 75
            RRR  L++R  I S +RE+F E  ++E+++     +P  E  I A              
Sbjct: 7   ARRRQALVERGAIFSRIREFFQEKGYLEVETPFRIPAPAPEAQIDAI---------PASG 57

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
            +LQTSPE   K++LAAG ++IF     WR+GE+G  H  EFTMLEWYR+   Y  LM++
Sbjct: 58  WFLQTSPELCMKRMLAAGYQRIFQICRCWRDGERGARHLSEFTMLEWYRSEADYLVLMEE 117

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
              +++     A     S++        + E ITVA AF RYA   +   L         
Sbjct: 118 TEALVQH---AAATGSISYRGQQIELSGKWERITVANAFLRYAGTSMWPALAEGT----- 169

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                                 F  I++E IEPNLG+   T +  YPA  SALA + P+D
Sbjct: 170 ----------------------FDEIMVELIEPNLGLARPTFIYDYPASCSALARLKPSD 207

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           P   +RFELY   +E+ NA  EL+DP+EQR RF  E  E+       YP+ E FL+ L E
Sbjct: 208 PTVAERFELYIGGLEIANAFSELIDPVEQRARFVAEAAERAAQGKTGYPMPEKFLSALDE 267

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           MP+++GIA+G DRLVM++  A  I+EV+  
Sbjct: 268 MPEAAGIALGLDRLVMVLLDAEIIDEVVAF 297


>gi|262278110|ref|ZP_06055895.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258461|gb|EEY77194.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 333

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/331 (28%), Positives = 149/331 (45%), Gaps = 22/331 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + + +R++F E   +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 21  DALKARAKLYTQIRQFFTERGVMEVETPIVSQAGVTDVHLASVQA-LRHINGKLQTQYLQ 79

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +   +
Sbjct: 80  TSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPSFDLKALMHETAEL 139

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   +    ++             P  ++   AF    +I       NP Q     L  
Sbjct: 140 LQTCLQHRFGEV------------RPFILSYKHAFQDRLDI-------NPLQATLKQLKD 180

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF- 258
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +        
Sbjct: 181 TANRVGLNLDLGDDRLAYIDLLFSHFVEPSLGFDAPVFLTDFPPEMASLAKVKLDGDGEE 240

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+ K      P+DE  L  L  MP
Sbjct: 241 VAARFEVYIEGLELANAYDELLDAEVLRSRFEADNAERAKQGLHVMPLDEHLLVALPHMP 300

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + SGIA+G DRL+M+      I +VI  P  
Sbjct: 301 ECSGIALGVDRLLMVAMDQVKIEKVITFPAD 331


>gi|260549297|ref|ZP_05823517.1| lysyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260407703|gb|EEX01176.1| lysyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 333

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 153/329 (46%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + + +R++F E   +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 21  DALNARAKLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQA-LRHINGKLQTQYLQ 79

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 80  TSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGLDLKALMHETADL 139

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   +    ++             P  ++   AF    +I       NP Q     L  
Sbjct: 140 LQTCLQHRFGEV------------RPFILSYKHAFQDRLDI-------NPLQATLKQLKD 180

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF- 258
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +   +    
Sbjct: 181 TANRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDAPVFLTDFPPEMASLAKVKVDEDGEE 240

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+ K      P+DE  LA L  MP
Sbjct: 241 VAARFEVYIEGLELANAYDELLDADVLRSRFEADNAERAKQGLHVVPLDEYLLAALPHMP 300

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+ T    I +VI  P
Sbjct: 301 ECSGIALGIDRLLMVATEQLKIEKVIAFP 329


>gi|239504301|ref|ZP_04663611.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase)(PoxA)
           [Acinetobacter baumannii AB900]
          Length = 324

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 95/329 (28%), Positives = 152/329 (46%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + + +R++F E   +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 12  DALKARAQLYTQIRQFFAERGVMEVETPVVSQAGVTDVHLASVQA-LRHINGKLQTQYLQ 70

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 71  TSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGLDLKALMHETADL 130

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   +    ++             P  ++   AF    +I       NP Q     L  
Sbjct: 131 LQTCLQHRFGEV------------RPFILSYKHAFQDRLDI-------NPLQATLKQLKD 171

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF- 258
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +   +    
Sbjct: 172 TANRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDAPVFLTDFPPEMASLAKVKVDEDGEE 231

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+ K      P+DE  LA L  MP
Sbjct: 232 VAARFEVYIEGLELANAYDELLDADVLRSRFEADNAERAKQGLHVMPLDEHLLAALPHMP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+      I +V+  P
Sbjct: 292 ECSGIALGVDRLLMVAMDQVKIEKVVAFP 320


>gi|190344391|gb|EDK36059.2| hypothetical protein PGUG_00157 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 544

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 71/342 (20%), Positives = 138/342 (40%), Gaps = 11/342 (3%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-L 76
            R  ++ R+++  ++R +F++ QF+E+ +  L  + G   + + F T         +  L
Sbjct: 199 SREHMVIRSLVIQAIRSFFLQRQFLEVQTPLLAGN-GTGANAQPFKTASRALGSSEEESL 257

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L+ +PE   K+L+ +G +K+F    ++RN      H PEF   E+Y++  S E+LM+  
Sbjct: 258 SLRVAPELWLKRLVISGFDKVFEIGPSFRNEGVDATHNPEFYTCEFYQSFLSLEELMEIT 317

Query: 137 MNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++        +      + ++ +    EP        +     I   T    P + D +
Sbjct: 318 QDLFAHIHSSLSTHRTKLKLLDQHLTSLEPLASRNFRRYEFIPTIQEITGHPFPKKMDSN 377

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP------NLGINCCTILDRYPAPESALA 249
            L     + G  +  + + + +   +    +EP         I         P  +S   
Sbjct: 378 ALVEYFHKIGAALPSNKSPASLLDELSSLYLEPLSLASKEPVIFYNQPAALSPLAKSTTR 437

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK-KKIYNETYPIDED 308
                    + RFEL+    E  N+ +E   P  Q  +F+ +   K      E    D  
Sbjct: 438 TYSNHPHEISSRFELFIDGKEYVNSYEEENSPFAQVSKFKIQQAAKSDHHDPEALVPDWQ 497

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +   +   +P + G   G DRLVML +GA+ I++V+     +
Sbjct: 498 YARVMEYGLPPTGGWGCGIDRLVMLFSGASRISQVLPFGTIR 539


>gi|222055870|ref|YP_002538232.1| tRNA synthetase class II (D K and N) [Geobacter sp. FRC-32]
 gi|221565159|gb|ACM21131.1| tRNA synthetase class II (D K and N) [Geobacter sp. FRC-32]
          Length = 307

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 115/329 (34%), Positives = 165/329 (50%), Gaps = 37/329 (11%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           R+  L  R++I   +R++F E  ++E+D+     +P  E+HI A               +
Sbjct: 10  RKEALKGRSLIIQKIRQFFNEGGYLEVDTPLRIPAPAPESHIDAV---------PSGNWF 60

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           LQTSPE   K++LAAG E+IF     WR+GE+G  H PEFTMLEWYR    Y  LM DC 
Sbjct: 61  LQTSPELCMKRMLAAGYERIFQICRCWRDGERGKRHLPEFTMLEWYRLESDYRDLMDDCE 120

Query: 138 NIIRCAAEVANQKI-FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
            ++R  +   ++    S+        +  E ITV EAF RY                  +
Sbjct: 121 ALVRFLSCAIHKNAGISYLGKTIELEAPWEKITVEEAFLRYT----------------AM 164

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
              +A++            D+F  +++  IEPNLGIN  T +  YPA   ALA +   + 
Sbjct: 165 SVEEAEEK-----------DLFDELMVNDIEPNLGINRPTFIYDYPAARGALARLKKENG 213

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM 316
           +  +RFELY   IEL N   EL D  EQR RF KE + +  +    YP+ + FL  L+ M
Sbjct: 214 KLAERFELYMGGIELANGFSELNDSQEQRERFAKEGEFRASMGKTAYPLPDRFLDELSGM 273

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             ++GIA+G DRLVML+     I+ V+  
Sbjct: 274 GPAAGIALGVDRLVMLLLDVQEIDGVVSF 302


>gi|56461375|ref|YP_156656.1| hypothetical protein IL2275 [Idiomarina loihiensis L2TR]
 gi|56180385|gb|AAV83107.1| Truncated class II lysyl-tRNA synthetase [Idiomarina loihiensis
           L2TR]
          Length = 325

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 99/327 (30%), Positives = 151/327 (46%), Gaps = 21/327 (6%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI-RKPLYLQ 79
            L+KR      +R++F E +  E+D+  L      + H+   +TE         + LYLQ
Sbjct: 13  VLVKRADFMRQVRQFFYERKVTEVDTHLLSQFGVTDCHLNNLTTEFKYPLASGNRTLYLQ 72

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPE++ K++LAA  + I+  +H  R+ E G  H PEFT+LEWYR      QL+ +   +
Sbjct: 73  TSPEYAMKRILAAYGKDIYQLSHVVRDDEIGRFHNPEFTLLEWYRVGYDDIQLIAEVSEL 132

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +    +    K+ ++Q    +   E    T      R   I+     D   + D      
Sbjct: 133 LTEVCDAPETKVITYQQCFLDYLGEDPLTTCGVENIRQELIEQPALTDWMSKEDDEN--- 189

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
                            I      E IE          +  +P  ++ALA I   +PR +
Sbjct: 190 ----------------TILQVAFSELIEGQFPAEIPICITEFPKSQAALAKIDQHNPRVS 233

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           +RFE Y   +EL N  +EL DP EQR RF+++ Q +K++   T P D   LA L    P 
Sbjct: 234 RRFEFYYQGVELANGYNELADPAEQRLRFDQDNQRRKQLNLPTQPEDTRLLAALESGFPA 293

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWT 345
            SG+A+GFDRL+M+  GA +I EV+  
Sbjct: 294 CSGVALGFDRLLMIACGAKSITEVLPF 320


>gi|262372005|ref|ZP_06065284.1| conserved hypothetical protein [Acinetobacter junii SH205]
 gi|262312030|gb|EEY93115.1| conserved hypothetical protein [Acinetobacter junii SH205]
          Length = 336

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 148/329 (44%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             +  R  + + +R++F E   +E+++  L  +   + H+ +   +  I   +    YLQ
Sbjct: 24  EAIKARAEMYNKIRQFFAERNVLEVETPVLSQAGVTDVHLASVQVQRHIHGKLNTQ-YLQ 82

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF  K+LLA+G   IF     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 83  TSPEFPMKRLLASGSGPIFQICKVFRDDEHGRKHNSEFTMLEWYRPAMDLKALMHETADL 142

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +         +I             P  ++   AF     I       NP Q     L  
Sbjct: 143 LETCLAHHFGEI------------RPIILSYKHAFQDRLEI-------NPLQASLKQLKD 183

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF- 258
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +   +    
Sbjct: 184 TAHRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDKPVFLTDFPPEMASLAKVKQDEDGEC 243

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD      RFE + QE+        P D+  L+ L  MP
Sbjct: 244 VAARFEVYIEGLELANAYDELLDAEVLAARFEADNQERALQGLPVIPTDQYLLSALPHMP 303

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+V     I++VI  P
Sbjct: 304 ECSGIALGIDRLLMVVMNKMKIDQVIAFP 332


>gi|299769067|ref|YP_003731093.1| putative lysyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298699155|gb|ADI89720.1| putative lysyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 324

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 151/329 (45%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + + +R +F E   +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 12  DALKARAKLYNQIRHFFAERDVMEVETPIVSQAGVTDVHLASVQA-LRHINGKLQTQYLQ 70

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 71  TSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGLDLKALMHETADL 130

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   +    ++             P  ++   AF    +I       NP Q     L  
Sbjct: 131 LQSCLQHRFGEV------------RPFILSYKHAFQDRLDI-------NPLQATLKQLKG 171

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF- 258
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +   +    
Sbjct: 172 TANRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDAPVFLTDFPPEMASLAKVKVDEDGEE 231

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+ K      P+DE  LA L  MP
Sbjct: 232 VAARFEVYIEGLELANAYDELLDAEVLRSRFEADNAERAKQGLHVMPLDEHLLAALPHMP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+      I +VI  P
Sbjct: 292 ECSGIALGIDRLLMVAMDQVKIEKVITFP 320


>gi|146421671|ref|XP_001486780.1| hypothetical protein PGUG_00157 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 544

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 72/341 (21%), Positives = 139/341 (40%), Gaps = 11/341 (3%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP-LY 77
           R  ++ R+++  ++R +F++ QF+E+ +  L  + G   + + F T L     + +  L 
Sbjct: 200 REHMVIRSLVIQAIRSFFLQRQFLEVQTPLLAGN-GTGANAQPFKTALRALGLLEEESLS 258

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L+ +PE   K+L+ +G +K+F    ++RN      H PEF   E+Y+   S E+LM+   
Sbjct: 259 LRVAPELWLKRLVISGFDKVFEIGPSFRNEGVDATHNPEFYTCEFYQLFLSLEELMEITQ 318

Query: 138 NIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++        +      + ++ +    EP        +     I   T    P + D + 
Sbjct: 319 DLFAHIHSSLSTHRTKLKLLDQHLTSLEPLASRNFRRYEFIPTIQEITGHPFPKKMDSNA 378

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP------NLGINCCTILDRYPAPESALAN 250
           L     + G  +  + + + +   +    +EP         I         P  +S    
Sbjct: 379 LVEYFHKIGAALPSNKSPASLLDELSSLYLEPLSLASKEPVIFYNQPAALSPLAKSTTRT 438

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK-KKIYNETYPIDEDF 309
                   + RFEL+    E  N+ +E   P  Q  +F+ +   K      E    D  +
Sbjct: 439 YSNHPHEISSRFELFIDGKEYVNSYEEENSPFAQVSKFKIQQAAKLDHHDPEALVPDWQY 498

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              +   +P + G   G DRLVML +GA+ I++V+     +
Sbjct: 499 ARVMEYGLPPTGGWGCGIDRLVMLFSGASRISQVLPFGTIR 539


>gi|119475087|ref|ZP_01615440.1| lysyl-tRNA synthetase-related protein [marine gamma proteobacterium
           HTCC2143]
 gi|119451290|gb|EAW32523.1| lysyl-tRNA synthetase-related protein [marine gamma proteobacterium
           HTCC2143]
          Length = 322

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 100/334 (29%), Positives = 150/334 (44%), Gaps = 27/334 (8%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L +R  + + +R +F ++  +E+++  L      + ++     +           YLQ
Sbjct: 13  TVLRERANVIACIRSFFSQHAVLEVETPLLARHSVTDPYME--ILKGDNPLGKSGAFYLQ 70

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPE++ K+LLAAG   IF    A+R GEQG  H PEFT+LEWYR   ++ QLM +  ++
Sbjct: 71  TSPEYAMKRLLAAGSGPIFEITKAFRKGEQGSRHNPEFTLLEWYRPGFNHFQLMTEIESL 130

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +                           ++  E F ++ NI       NP       L  
Sbjct: 131 VGGLLS---------------CDRPFLRMSYGEMFQQFLNI-------NPHTISCDELSA 168

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF- 258
            A+             D  + +L E IEP LGI+    +  YPA +SALA     D    
Sbjct: 169 LARNTIDVQMQSAQKDDWLNILLTEIIEPQLGIDVPVFIYDYPASQSALAKTVINDEGIL 228

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
             +RFELY   IEL N   EL D  EQ  RF+ E   +  +  E   +D   LA +   +
Sbjct: 229 VAQRFELYVHGIELANGYFELTDAGEQEKRFQGEQSMRLALGVEQIEVDIYLLAAMNEGL 288

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           P  +G+A+G DRLVML     NI +V+  P  ++
Sbjct: 289 PSCAGVALGVDRLVMLALQIKNIADVMAFPSDRA 322


>gi|149192250|ref|ZP_01870464.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148833923|gb|EDL50946.1| lysyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 290

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 93/313 (29%), Positives = 150/313 (47%), Gaps = 27/313 (8%)

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           +E+D+ ++ ++   + H+  F TE +   +   + LY  TSPEF  K+LLAAG   I+  
Sbjct: 1   MEVDTPAMSHATVTDIHLHTFQTEFVGPGYADGRKLYFMTSPEFHMKRLLAAGSGSIYQI 60

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
             A+RN E G  H PEFTMLEWYR    + QLM +   ++R        +  ++Q     
Sbjct: 61  NKAFRNEESGRYHNPEFTMLEWYREGFDHHQLMDEMDELLRMVLACDGAERMTYQQA--- 117

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIF 218
                 ++T  E                P       L   A   G+      +     + 
Sbjct: 118 ------FMTHLEVC--------------PLVASMPELLTAAGSLGLSDIADKEQDRDTLL 157

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             +    +E  +G +    +  +PA ++ALA + P D R   RFE+Y   IEL N   EL
Sbjct: 158 QLLFSMGVETKIGQDVPAFVYDFPASQAALAKVNPNDERVADRFEVYFKGIELANGFHEL 217

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            +P EQ  RFE++ ++++++     PID   +  L   +P  +G+A+G DRL+ML  GA 
Sbjct: 218 DNPNEQLARFEEDNRKRQQMGLPQQPIDYHLIDALKSGIPACAGVALGIDRLIMLALGAK 277

Query: 338 NINEVIWTPFSQS 350
           +I+EV+  PF ++
Sbjct: 278 HIDEVVAFPFPRA 290


>gi|126134111|ref|XP_001383580.1| mitochondrial lysine-tRNA synthetase [Scheffersomyces stipitis CBS
           6054]
 gi|126095729|gb|ABN65551.1| mitochondrial lysine-tRNA synthetase [Scheffersomyces stipitis CBS
           6054]
          Length = 531

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 78/354 (22%), Positives = 151/354 (42%), Gaps = 14/354 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFST---ELIIQD 70
            +   +  +L ++ I  ++R + ++N F+E+++  L    G   + + F+T    +   D
Sbjct: 179 VNRDSQTPILVKSYIIQAIRSFLLQNNFLEVNTPIL-SGAGTGANAKPFATVAHSISTTD 237

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                + L+ +PE   KKL+  G EKIF     +RN      H PEFT  E+Y++  S  
Sbjct: 238 AKEAAVQLRVAPELWLKKLVIGGFEKIFEIGSNFRNEGIDSTHNPEFTSCEFYQSFTSLP 297

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +LM+   N+ +   E    +    Q++  N  +   +      +     ++  T +  P 
Sbjct: 298 ELMQMTENMFKYIHEDLIVRAAKLQSITSNLDALDSFTRPFPKYEFVPTLESKTGIPLPQ 357

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP--NLGINCCTILDRYPAPESAL 248
           +     +    Q+  + V  + + +++   I    +E   N   N    +   PA  S L
Sbjct: 358 ELTSSNMIEYYQKLNLPVPDNKSPANLLDNISGIYLESISNEFENVPVFIYNQPAVLSPL 417

Query: 249 ANIYP--ADPRFTK----RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A       D   T     RFEL+    E  NA +E   P +Q  +F+ + + + +  +E 
Sbjct: 418 AKSADVTYDGGRTYDISLRFELFINGKEYVNAYEEENSPFDQLAKFKLQQEARDEFKDEE 477

Query: 303 YPI-DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
             I D +++  +   +P + G   G DRL ML  G + I+ V+     +  +++
Sbjct: 478 MLIPDLEYIKAMEYGLPPTGGWGCGIDRLAMLFAGVDRIDSVLPFGNLRDVKKQ 531


>gi|288941474|ref|YP_003443714.1| tRNA synthetase class II (D K and N) [Allochromatium vinosum DSM
           180]
 gi|288896846|gb|ADC62682.1| tRNA synthetase class II (D K and N) [Allochromatium vinosum DSM
           180]
          Length = 330

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 164/346 (47%), Gaps = 29/346 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W  +        +  R  + + +R +F E+  +E+++  L  +   +  + + ST++ I 
Sbjct: 9   WRPNADL---TAIRARAELYARIRAFFSESGVLEVETPILSRAAVTDPALASLSTQVDIA 65

Query: 70  D-HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
               R+PLYLQTSPEF+ K+LLAAG   I+     +R+ E+G  H PEF++LEWYR    
Sbjct: 66  GFGPRRPLYLQTSPEFAMKRLLAAGIGPIYQICKVFRDEERGRRHHPEFSLLEWYRPGWD 125

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           Y +LM +   ++R A                 P    E +T  + F     +D       
Sbjct: 126 YGRLMDEVGALVRLALN--------------RPTMPIERLTYRDLFRDGLGLDPW----- 166

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDI--FSRILIEKIEPNLGINCCTILDRYPAPES 246
               +   L   A++AG+R               +L + +E  LG    T L  YP  ++
Sbjct: 167 --YTEVDQLRRTAERAGLRGLDGLDLDRDGWLDLLLTQCLESGLGRGRLTFLCDYPPSQA 224

Query: 247 ALAN-IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           AL+      +    +RFELY   IEL N   EL+D  EQR RF+ ++  +++      PI
Sbjct: 225 ALSRVRTSGEVPVAERFELYIDGIELANGFGELVDVREQRARFQADLAFRREQGRPEPPI 284

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           DE  L  L   MP+ +G+A+G DRL+M+ TG  +I+ V+     ++
Sbjct: 285 DEPLLDALEHGMPECAGVALGLDRLLMIATGVEHIDAVLTFAIERA 330


>gi|88798860|ref|ZP_01114442.1| lysyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88778340|gb|EAR09533.1| lysyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 316

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 102/346 (29%), Positives = 159/346 (45%), Gaps = 35/346 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +P+ P W           L +R  I + +R YF ++Q +E+++  L    G + ++ A+ 
Sbjct: 1   MPN-PQWQPTASI---QTLRRRAEILAEIRRYFQQHQVLEVETPILSSYGGTDVNLDAWQ 56

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           T           L L TSPEF+ K+LLAAG   I+     +R  EQG  HQPEFTMLEWY
Sbjct: 57  TAEG--------LTLHTSPEFAMKRLLAAGSGDIYQICRVFRQDEQGQRHQPEFTMLEWY 108

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           R      +LM D   +I   + +                   + IT A+AF         
Sbjct: 109 RVGFQENELMDDVATLIEHVSGI--------------RELPRQVITYAQAFE-------A 147

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
             L +P +    +L    +        +    +    ++   +EP+L       +  +P+
Sbjct: 148 QGLPDPHRASLDMLQAAVRSRLNAAPDNWKRDECLDALMAMVVEPSLPAETLVFVQNFPS 207

Query: 244 PESALANIYPADP-RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
            ++ALA     D     +RFEL+   +EL N   EL D  EQ  RFE++ Q++       
Sbjct: 208 SQAALAQHSRIDGVLVARRFELFWGGMELANGYYELTDAQEQAKRFEQDCQDRLANGQAI 267

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +DE FLA L+  MP+ SG+A+G DRL+M + G  +I+EV+  P 
Sbjct: 268 PKLDERFLAALSQGMPECSGVALGLDRLIMKLLGKAHIDEVVAFPL 313


>gi|227513894|ref|ZP_03943943.1| possible lysine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087742|gb|EEI23054.1| possible lysine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 248

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 114/256 (44%), Gaps = 10/256 (3%)

Query: 99  CFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNV 157
                +RN      H PEF  +E Y A+  +  +MK+   I + AA V       ++Q  
Sbjct: 1   ELGRIFRNEGMDPYHNPEFDTMETYAAYFDFNDVMKETEGIFKAAAGVVADDLKITYQGT 60

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +  +  + + + +A      ID    +              A   GI+         I
Sbjct: 61  ELDFSTSFKRLHMVDAIKEATGIDFWQEMTV------EEARKLADDNGIKYESWWKVGHI 114

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
            +    EK++    +     +  +P   S LA I   D RFT RFELY    E  NA  E
Sbjct: 115 INAFFEEKVQDT--LEQPIFIYGHPVEVSPLAKINEEDSRFTDRFELYILGKEYANAFSE 172

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DPI+QR RF+ + QE  +  +E  PIDEDF+  L   MP + G+ +G DR+VML+T A
Sbjct: 173 LNDPIDQRKRFKAQAQENAEGNDEAQPIDEDFVEALEYGMPPTGGLGVGIDRMVMLMTDA 232

Query: 337 NNINEVIWTPFSQSNQ 352
            +I +V+  P  +  +
Sbjct: 233 KSIRDVLLFPTMRPKK 248


>gi|301061193|ref|ZP_07201982.1| lysine--tRNA ligase-like protein GenX [delta proteobacterium
           NaphS2]
 gi|300444735|gb|EFK08711.1| lysine--tRNA ligase-like protein GenX [delta proteobacterium
           NaphS2]
          Length = 317

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 113/336 (33%), Positives = 168/336 (50%), Gaps = 37/336 (11%)

Query: 11  NRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD 70
           +     +R+ +LL R  I  S+RE+F+   ++E+++  L  +P  E HI + S       
Sbjct: 13  DPAVFSKRKSYLLSRAKIVQSIREFFITRDYLEVETPQLITAPAPEAHIESISV------ 66

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                 YLQTSPE   K+LL  G  +IF  +  +R  E+G LH PEF++LEWYR    Y 
Sbjct: 67  ---GDRYLQTSPELCMKRLLTRGFPRIFQISRCFRGEERGDLHLPEFSLLEWYRTRIDYR 123

Query: 131 QLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            LM +C N+    A   N   +  ++ V  +  +  E ++V  AF R+  + +   L + 
Sbjct: 124 DLMVECENLFLFLARQLNLGTVLRYRGVTVDLAAPWERLSVQAAFERHTAVSVDQALRD- 182

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                                     D F + ++ +IEP+LG+   T L  YPA   ALA
Sbjct: 183 --------------------------DTFDQTMVSEIEPHLGMKTPTFLYDYPASLGALA 216

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
            + P +P   +RFE+Y   IEL N   EL D  EQR RFEKE+ ++      T P+ E F
Sbjct: 217 RLKPGNPSLAERFEIYVAGIELANGFSELNDAREQRLRFEKELAQRALAGKPTSPMPERF 276

Query: 310 LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           L+ L  MP+++GIA+G DRL ML   A  I+EV+  
Sbjct: 277 LSDLRAMPEAAGIALGVDRLAMLFNDARTIDEVVAF 312


>gi|330936056|ref|XP_003305230.1| hypothetical protein PTT_18017 [Pyrenophora teres f. teres 0-1]
 gi|311317841|gb|EFQ86681.1| hypothetical protein PTT_18017 [Pyrenophora teres f. teres 0-1]
          Length = 555

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 81/371 (21%), Positives = 144/371 (38%), Gaps = 34/371 (9%)

Query: 1   MHQIPSQPWWNRDFHYRR-----------RPFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +H +P +   + +   RR              L  R +I   +R YF+++ F+E+++ + 
Sbjct: 190 LHHLPEKID-DAETLARRPHIHALTSDEPGDVLRLRALIYDYVRTYFIQSGFLEVETPTF 248

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             + G     R F T  +  +    P+ L+ +PE + K+L+  G++KIF     +RN   
Sbjct: 249 DVNAGGAI-ARPFET--VANELSNTPIRLRIAPELNLKRLIIGGQDKIFEIGRVFRNEGV 305

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H PEF+  E+Y    +   ++     ++            ++        + PE I 
Sbjct: 306 DNTHNPEFSTCEFYEVGATLPTVIARTEQLVHGLHTAIESLRSTY----FPTLAAPEDID 361

Query: 170 VAEAFARYANIDLGTTLDNPDQPDR------HLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               FA+   I           PD         L     +  + +  + T   +   +  
Sbjct: 362 FTHPFAQLPFIPTIEKGCGRTLPDLSLPNASEKLLKLFNELDLAIPPNPTLPRLLDTLAE 421

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPAD---PRFTKRFELYACNIELCNACDELLD 280
             IEP       T + ++P   S L+  +  +    R   R EL+    E  NA +E   
Sbjct: 422 IYIEPLC--KNPTFITQHPEALSPLSKSFVDEATGQRVASRVELFIHGREYVNAYEEENS 479

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P EQR +F +++    +       IDE +L  L   MP + G   G DRLVML      I
Sbjct: 480 PFEQRRKFMQQLDFHTEG---EGAIDESYLEALEWGMPPTGGWGCGLDRLVMLFASKKRI 536

Query: 340 NEVIWTPFSQS 350
            +V+     ++
Sbjct: 537 ADVLPFGTLRN 547


>gi|330722514|gb|EGH00336.1| Lysyl-tRNA synthetase (class II) [gamma proteobacterium IMCC2047]
          Length = 251

 Score =  212 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 9/255 (3%)

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQ 155
           +F     +RN      H PEFTMLE+Y+A+  Y  LM    +++R  A+ V       +Q
Sbjct: 1   MFEINRNFRNEGLSTRHNPEFTMLEFYQAYADYNDLMNLTEDMLRHVAQEVLGTTKVHYQ 60

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
             + +     + ++V E+   +        L      D       A    I +       
Sbjct: 61  GSDYDFGQPFQRMSVVESILHF-----NPELTLEQINDLGSAREVATGLEIPLKDSWGLG 115

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            +   I  + +E    ++  T +  YPA  S LA     D   T RFE +    E+ N  
Sbjct: 116 KVQIEIFEKTVEHR--LDQPTFITEYPAEVSPLARRSDTDHHVTDRFEFFVGGREIANGF 173

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL D  +Q  RF  ++ EK    +E    DED++  L   +P ++G  +G DRLVML T
Sbjct: 174 SELNDAEDQAERFRAQVAEKDAGDDEAMHYDEDYVTALEYGLPPTAGEGIGIDRLVMLFT 233

Query: 335 GANNINEVIWTPFSQ 349
            + +I +V+  P  +
Sbjct: 234 DSPSIRDVLLFPHMR 248


>gi|332968460|gb|EGK07526.1| lysine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 329

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 95/327 (29%), Positives = 151/327 (46%), Gaps = 30/327 (9%)

Query: 24  KRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPE 83
           KR  + + +R++F E Q +E+ +  +  +   +  + + ST + +QD   +  YL TSPE
Sbjct: 23  KRAQMLTQIRQFFAERQVLEVQTPLMSKAGNTDVFVPSISTNVTVQDK-PQTHYLHTSPE 81

Query: 84  FSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
           F+ K++LA+ +  I+     +R+ E G  H  EFTMLEWYR            +  +   
Sbjct: 82  FAMKRMLASWKVAIYQICPVFRDNEVGSRHNSEFTMLEWYRPGFD--------LEALAAE 133

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
                  ++                + ++AF  Y  I       +P       +   A++
Sbjct: 134 LSDLLTTVYGQSQNLTYY-------SYSKAFIDYVGI-------HPLTASLETIKAAAEK 179

Query: 204 A---GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI--YPADPRF 258
               G+ +  D         +    +EPNLG    T++  YP   +ALA +         
Sbjct: 180 NALGGLDLGEDRQGW--LDVLFSHLVEPNLGYQSPTLITDYPPATAALAKVETDEQGNEV 237

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            KRFELY   IE+ NA DEL D    + RFE + +E+ +      PIDE  +A    +P 
Sbjct: 238 AKRFELYINGIEIANAYDELADGAALQARFEADNEERARRGLPIMPIDERLVAACDHLPA 297

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWT 345
            SGIA+G DRL+M+VTGA +I+EVI  
Sbjct: 298 CSGIALGIDRLLMVVTGAKSIDEVIGF 324


>gi|116747527|ref|YP_844214.1| tRNA synthetase, class II (D, K and N) [Syntrophobacter
           fumaroxidans MPOB]
 gi|116696591|gb|ABK15779.1| tRNA synthetase, class II (D, K and N) [Syntrophobacter
           fumaroxidans MPOB]
          Length = 308

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 109/330 (33%), Positives = 160/330 (48%), Gaps = 36/330 (10%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           +R  L  R+ +   +R +F    F+E+ +  L  +P  E +I A               +
Sbjct: 10  KRDALELRSRVIERIRSHFRRAGFLEVQTPLLTPAPAPELNIEAVP--------AGDGFF 61

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L TSPE   K+LLAAG  K+F     +R+GE+G LH PEFT+LEWYR   SY+ + +DC+
Sbjct: 62  LATSPELYMKRLLAAGYGKLFQLTPVFRSGERGRLHHPEFTLLEWYRTGASYKDMQRDCV 121

Query: 138 NIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
            ++    A  A     + +     P    E +TV +AF R A  D               
Sbjct: 122 ELLHEVCAFGAATGGGTCRGSVIEPGKPWESLTVRDAFLRLAGWDPV------------- 168

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                    +    D    D+       K+EP LG      L+ YP   +ALA +  + P
Sbjct: 169 ---------VDFDPDRFDVDLV-----TKVEPYLGFPNPCFLEDYPPERAALARLKDSAP 214

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM 316
              +RFELY   IEL N   EL DP EQR RFE  + ++ +    + P+ E FLA +  +
Sbjct: 215 PVAERFELYWAGIELANGFTELTDPAEQRKRFEAVLADRHEAGLSSRPMPEAFLAAIEHL 274

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           PQ +GIA+G DRLVML+ GA++++ V+  P
Sbjct: 275 PQCAGIALGLDRLVMLLAGADSVDRVVAFP 304


>gi|95928932|ref|ZP_01311677.1| tRNA synthetase, class II (D, K and N) [Desulfuromonas acetoxidans
           DSM 684]
 gi|95134833|gb|EAT16487.1| tRNA synthetase, class II (D, K and N) [Desulfuromonas acetoxidans
           DSM 684]
          Length = 304

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 167/342 (48%), Gaps = 43/342 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +    W       +++  L +R  +  ++R +FV  +F+E+D+         E HI   +
Sbjct: 1   MSDPNWGL----LKKKHRLNERARMMQTIRAFFVAQEFLEVDTPYRIPCNAPEAHIDPVT 56

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           +   +         L TSPE   K+LLAAG E+IF   H WR  E+G  H  EFTMLEWY
Sbjct: 57  SSGQV---------LHTSPELCMKRLLAAGYERIFQLCHCWRAEERGQRHLGEFTMLEWY 107

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           RA   Y  LM+DC  ++R       Q   S+Q ++       E +T+++AF RYA + L 
Sbjct: 108 RAEADYTDLMEDCEGLLRALCP---QGTLSYQGMSITLQDPFERLTLSDAFDRYAPMSLT 164

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
             +DN                             F  I  + IEPNLG +  T +  YPA
Sbjct: 165 EAIDNT---------------------------CFDEIYTQHIEPNLGKHQPTFITHYPA 197

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
             +ALA + P DP   +RFELY   +EL NA  EL DP EQR RF  E   ++++     
Sbjct: 198 DMAALARLCPEDPDHAERFELYIAGMELANAFSELNDPAEQRQRFVAEQALREQMGKAPS 257

Query: 304 PIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           P+ E FL  L  +P S+GIA+G DRL ML+T +  I+ V+  
Sbjct: 258 PLPEPFLQELEHLPPSAGIALGIDRLAMLLTDSTTIDGVVAF 299


>gi|294654499|ref|XP_456557.2| DEHA2A05412p [Debaryomyces hansenii CBS767]
 gi|199428932|emb|CAG84512.2| DEHA2A05412p [Debaryomyces hansenii]
          Length = 553

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 75/343 (21%), Positives = 138/343 (40%), Gaps = 13/343 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFST---ELIIQD 70
            +   +  L+ ++++  ++R++FV+  F+E+ +  L    G   +   F T    L    
Sbjct: 204 VNADSKQRLMIKSIVIQAIRQFFVKRDFMEVQTPILGG-YGTGANAEPFKTISNALKSTG 262

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
              K L L+ +PE   KKL+ +G +KIF     +RN      H PEFT  E+Y++  +  
Sbjct: 263 DGSKYLQLRVAPELWLKKLVISGFDKIFEIGQNFRNEGIDSTHNPEFTTCEFYQSFTNLN 322

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +LM     +     +   +K  S  +      S     T  +       ++  T +  P 
Sbjct: 323 ELMILTEELFVEIFDTLKEKKLSLVDEQLPSLSALASGTFPKY-EFIPTLESKTGVALPS 381

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY------PAP 244
           +     L       G+ V    + S++   +    +E         I          P  
Sbjct: 382 ELTAESLIEYYNSIGLEVPVLKSPSNLLDNLSSIYLESISQDTKTPIFIYNQPSVLSPLA 441

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           +SA+ +        + RFEL+    E  N+ +E   P EQ  +F+ +   K +  +    
Sbjct: 442 KSAILDYDGRSYDISLRFELFIQGKEYVNSYEEENSPFEQSKKFKLQQLTKTQFNDNEMI 501

Query: 305 I-DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           I D +++  +   +P + G   G DRL ML +G+  I EV+  
Sbjct: 502 IPDWEYIKSMEYGLPPTGGWGCGIDRLCMLFSGSERIEEVLSF 544


>gi|312217676|emb|CBX97623.1| similar to lysyl-trna synthetase [Leptosphaeria maculans]
          Length = 556

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 76/340 (22%), Positives = 134/340 (39%), Gaps = 19/340 (5%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R MI   +R YF+++ F+E+++     + G     R F T  +  +    P+ L+
Sbjct: 219 DVLRLRAMIYDYIRMYFIQSGFLEVETPLFDVNAGGAI-ARPFET--VANEMSNIPIKLR 275

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE + K+L+  G++KIF    ++RN      H PEF+  E+Y    +   ++     +
Sbjct: 276 IAPELNLKRLIIGGQDKIFELGRSFRNEGVDNTHNPEFSTCEFYEVGATLADVVARTEQL 335

Query: 140 IRCAAEVANQKIFSFQN-----VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
           I            ++          +  +   ++       +     L          D 
Sbjct: 336 IHGLHTATKALRPTYFPSLTAPEEIDFSTPFAHLPFIPTVEQACGRKLPNLSTPTAADD- 394

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
             L    +   I +  + T   +   +    IEP       T + ++P   S L+  Y  
Sbjct: 395 --LLALFKDLDITIPPNPTLPRLLDTLAEVYIEPLC--KNPTFISQHPEALSPLSKSYVD 450

Query: 255 D---PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
           D    R   R EL+  + E  NA +E   P EQR +F ++   + + +     IDE +L 
Sbjct: 451 DVTGQRVASRVELFIHSREYVNAYEEENSPFEQRRKFIQQRGFQAEGHEGA--IDESYLE 508

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L   MP + G   G DRLVML      I +V+     ++
Sbjct: 509 ALEWGMPPTGGWGCGLDRLVMLFASKKRIADVLPFGTLRN 548


>gi|325123135|gb|ADY82658.1| putative lysyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 324

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 95/329 (28%), Positives = 152/329 (46%), Gaps = 22/329 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + + +R++F E   +E+++  +  +   + H+ +    L   +   +  YLQ
Sbjct: 12  DALKARAKLYTQIRQFFAERDVMEVETPIVSQAGVTDVHLASVQA-LRHINGKLQTQYLQ 70

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR     + LM +  ++
Sbjct: 71  TSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGLDLKALMHETADL 130

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   +    ++             P  ++   AF    +I       NP Q     L  
Sbjct: 131 LQTCLQHRFGEV------------RPFILSYKHAFQDRLDI-------NPLQATLKQLKD 171

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF- 258
            A + G+ +   D        +    +EP+LG +    L  +P   ++LA +   +    
Sbjct: 172 TANRVGLNLDLGDDRLAYMDLLFSHFVEPSLGFDAPVFLTDFPPEMASLAKVKVDEDGEE 231

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
              RFE+Y   +EL NA DELLD    R RFE +  E+ K      P+DE  LA L  MP
Sbjct: 232 VAARFEVYIEGLELANAYDELLDADVLRSRFEVDNAERAKQGLHVMPLDEHLLAALPHMP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + SGIA+G DRL+M+      I +V+  P
Sbjct: 292 ECSGIALGVDRLLMVAMDHVKIEKVVTFP 320


>gi|310790050|gb|EFQ25583.1| lysyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 531

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 88/383 (22%), Positives = 151/383 (39%), Gaps = 40/383 (10%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           M QIP     + +   R+R             L  R+ I   +R+YF E  F+E  +  L
Sbjct: 142 MEQIPQT-LTDPETKSRKRHVDMIVNPEVADILRLRSHITKYMRDYFHEQSFLEFQTPIL 200

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             + G     R+F+T+        K L L+ +PE   K+L+  G  K+F    A+RN   
Sbjct: 201 AENAGGAV-ARSFTTQATEF--PSKELSLRIAPELWLKRLVVGGVHKVFEIGPAFRNEGI 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR----CAAEVANQKIFSFQNVNCNPFSEP 165
              H PEFTM E+Y A+ +  +L+     ++         +   ++ S + ++ + F+ P
Sbjct: 258 DGTHNPEFTMCEFYSAYTNLPELIARTEELLAGLAAHCQHLIETQLTSLEPIDASKFARP 317

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
                       A       L   D     +  L   +  +      T   +  R+    
Sbjct: 318 FRQLEFIPALEEALGFRLPKLTGKDAYPELIAALALCKIEVPGGIPPTMPKLLDRLAAVY 377

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPR---FTKRFELYACNIELCNACDELLDPI 282
           +EP         +  +P   S LA  +         + R EL+    EL N  +E  DP 
Sbjct: 378 LEPKSFEGPL-FITHHPTCMSPLAKSFVCPATLQLVSARTELFVNGRELANMYEEENDPA 436

Query: 283 EQ-----RHRF----EKEMQEKKKIYNETYP-----IDEDFLACLT-EMPQSSGIAMGFD 327
            Q      HRF    + +   + K  +E +P     +D+ ++  L   +P + G   G +
Sbjct: 437 AQARKLAEHRFFGTGKDQALLEDK--DEPHPHRDAPLDKSYIRALEAGLPPTGGWGCGVE 494

Query: 328 RLVMLVTGANNINEVIWTPFSQS 350
           RLVML +GAN I++ +     ++
Sbjct: 495 RLVMLFSGANRISDCLSFGTLKN 517


>gi|303322843|ref|XP_003071413.1| lysyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240111115|gb|EER29268.1| lysyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320032821|gb|EFW14771.1| lysyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 574

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 78/339 (23%), Positives = 137/339 (40%), Gaps = 19/339 (5%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ I   +R +F+E +FIE+++     +       R F       + I + L L+
Sbjct: 232 DILRARSSIVQHIRNFFLERRFIEVNTPI-IAAAAGGAIARPF--HTTASESIEQLLALR 288

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G ++IF    ++RN      H PEFT  E+Y+A    E LM+    +
Sbjct: 289 IAPELWLKRLIVGGFDRIFEIGPSFRNEGLDKTHNPEFTTCEFYQAFADLECLMQMTETL 348

Query: 140 IRC---AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           +          N+K+ +   +  +  +    I    A          T  D         
Sbjct: 349 LSGLSQNIRELNEKLGTLHPIYVDFSTPFRRIDFVPALESAMGH---TLPDLKSDGATVK 405

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPA 254
           +        I +    +   +  ++  E +EP       T +  +P   S    + I+P 
Sbjct: 406 MVELLNTMSIPLPDHVSLPRLLDKLCAEYLEPQCKD--PTFIINHPECMSPLSKSYIHPT 463

Query: 255 DPRF-TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLAC 312
             +  + R EL+    E+ N  +E   P EQR +F++++  +     E    +DE +L  
Sbjct: 464 CSQVVSARAELFVEGKEVVNTYEEENSPFEQRRKFQEQLSYR---DPENPGELDESYLQA 520

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           L   +P + G   G DRL ML TG   I +V+     +S
Sbjct: 521 LEWGLPPTGGWGCGIDRLCMLFTGVRRIGDVLSFGNLRS 559


>gi|304311514|ref|YP_003811112.1| Predicted tRNA synthetases class II (D, K and N) [gamma
           proteobacterium HdN1]
 gi|301797247|emb|CBL45467.1| Predicted tRNA synthetases class II (D, K and N) [gamma
           proteobacterium HdN1]
          Length = 327

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 93/343 (27%), Positives = 145/343 (42%), Gaps = 27/343 (7%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L  R  +   +R++F E   +E+++  L  S   +     F T L   
Sbjct: 10  WRPSASL---DALRARAHLNQRIRDFFSERGVLEVETPLLCSSTATD----PFLTSL-SL 61

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
                  YLQTSPEF  K+LLAAG   IF     +R  E G LH PEF+MLEWYR   S 
Sbjct: 62  QWRGCTRYLQTSPEFPMKRLLAAGSGPIFQLCKVFRADEFGRLHNPEFSMLEWYRPGFSL 121

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             LM +   +I   A V                   + ++  +AF     +D  T  D  
Sbjct: 122 ADLMDETEALIVALAAVFG----------RPLSGPFQRVSYRKAFLDAVGVDPLTVSDL- 170

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                  L + A++       +       + ++ E +EP+LG     +    P+  S   
Sbjct: 171 ------QLSVIARECVPSAPEEWDRDGWLNLLMAEVVEPHLGNGPVFVWGFPPSQASLAR 224

Query: 250 NIYPAD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
            ++  D  R   R E Y   +EL N  DEL D  EQR RF+ ++ +++ +   + P+ + 
Sbjct: 225 CLHDDDGERVAARAEFYLGGMELANGYDELTDAQEQRVRFQADLAQRQCLDAASVPMPDA 284

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L  L   +P S+G+A+G DRL+M +     I +V      ++
Sbjct: 285 LLDALQAGLPPSAGMALGVDRLLMWLLDKPRIADVCSFTADRA 327


>gi|15839144|ref|NP_299832.1| lysyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|9107767|gb|AAF85352.1|AE004063_1 lysyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 301

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 91/315 (28%), Positives = 145/315 (46%), Gaps = 21/315 (6%)

Query: 32  LREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQTSPEFSCKKLL 90
           +R +F +   +E+++  L  +   E +I +F+T      D      +L+TSPE+  K+LL
Sbjct: 2   IRGFFADRGVLEVETPLLSAAGNTEPNIHSFTTCFTGHCDAGAAQRWLRTSPEYPLKRLL 61

Query: 91  AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK 150
           AAG    +     +RNGE G  H PEFTMLEWYR    + +L ++   ++R A  +  + 
Sbjct: 62  AAGIGDCYELGRVFRNGEAGGRHNPEFTMLEWYRVGWDHHRLAEETTALVREALALVERT 121

Query: 151 IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH 210
                             T  + F    +ID         +        QA   G     
Sbjct: 122 ATLHVT------------TYRQLFLDILDIDPLRAPQTVLR--------QALDGGEINPG 161

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
             +  D    ++  +I+P    +  T++D +PA + ALA I   DP   +RFELY    E
Sbjct: 162 GLSRDDWLDLLMTHRIQPTFPTDRITVIDDWPATQCALARIRSDDPPVAERFELYLGVHE 221

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLV 330
           + N   EL D  EQR RFE + Q +        P+DE  L  L+ +P  +G+A+G DRL+
Sbjct: 222 IANGYHELNDATEQRRRFEHDNQVRAARGLPQMPLDEPLLNVLSRLPDCAGVAVGVDRLL 281

Query: 331 MLVTGANNINEVIWT 345
           M ++   +I +V+  
Sbjct: 282 MAMSATASIADVMAF 296


>gi|149235416|ref|XP_001523586.1| hypothetical protein LELG_05002 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452565|gb|EDK46821.1| hypothetical protein LELG_05002 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 547

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 73/336 (21%), Positives = 139/336 (41%), Gaps = 28/336 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           ++ ++ +  ++R++F+   F+E+ +  L    G   + + F T+          + L+ +
Sbjct: 219 IIVKSQVIQAIRQFFINKGFLEMQTPILSSL-GTGANAQPFLTKFK-----DDHVQLRVA 272

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   KK++ AG EKIF   + +RN      H PEFT  E+Y++  S E+LM     +++
Sbjct: 273 PELWLKKMVIAGFEKIFEIGNNFRNEGIDQSHNPEFTSCEFYQSFTSLEELMNITEELLK 332

Query: 142 CAAE----VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
                          +  ++    F + +++   E         +     +         
Sbjct: 333 QIFHKFKVPLGGTEQTKVSLKSIKFPKYDFLPTLE---EITGKKINDLSLDSLLTLY--- 386

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEP---NLGINCCTILDRYPAPESALANIYPA 254
               ++ GI V  +     + + +    +E        N   I+   P   S LA     
Sbjct: 387 ----KELGITVPSNPNPISLVNNLSETYLESLSVTKHYNVPVIIYNQPEILSPLAKSKTD 442

Query: 255 DPR---FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK-IYNETYPIDEDFL 310
                  + RFEL+    E  NA +E  +P  Q  +F+++   K+K   NE    D +++
Sbjct: 443 GHNGIPVSLRFELFINGKEYVNAYEEENNPKIQLAKFQQQKANKQKYGDNEMLIPDWEYV 502

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             +   +P + G  +G DRL M V+GA  I+EV+  
Sbjct: 503 KTMEMGLPPTGGWGIGIDRLAMYVSGAERIDEVLPF 538


>gi|320582939|gb|EFW97156.1| Mitochondrial lysine-tRNA synthetase [Pichia angusta DL-1]
          Length = 531

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 139/367 (37%), Gaps = 31/367 (8%)

Query: 1   MHQIPSQPWWNRD-----------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +H +P   + +              + R R  ++ R  + S+LR +  ++ F+E  +  L
Sbjct: 165 LHPVPPA-FRDPGKVYSNRVIDYLANGRSREVMVARARLVSTLRRFLEDHGFMEFATPIL 223

Query: 50  QYSPGNETHIRAFST---ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
                   +   F+T    +         L ++ +PE   KKL+ +G +K++     +RN
Sbjct: 224 GSGNSGA-NATPFTTTSVHVKNNRDEPVQLSMRVAPELWLKKLVISGFDKVYEIGPVFRN 282

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                 H PEFT  E+Y    S  Q M+    + +      +      +  +        
Sbjct: 283 EGVDATHNPEFTSCEFYATFTSLAQTMEFTEKLFQRLIAELSTLAICRERCS------WL 336

Query: 167 YITVAEAFARYANIDLGTTLDNPD-----QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
             +++     +  ID    L               L    Q+ G+ +    +   +   +
Sbjct: 337 QQSLSRNGGEFKKIDCLQQLPLETGRPLPDFTSEALVQYFQELGVPLPKVRSPQKLLDEL 396

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLD 280
           +   +EP         L   P   S LA      +   + RFELY    E+ NA +E  +
Sbjct: 397 ISVYLEPLCRKEPT-FLYNLPEVLSPLAKSATRNNFSVSNRFELYIDGTEIINAYEEENN 455

Query: 281 PIEQRHRFEKEMQEKKKIYN-ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           P +Q  +F +++  + +  + +    D  ++  +   +P ++G  MG +R VM  TG   
Sbjct: 456 PFKQAAKFAQQLSARTQHNDTDAILPDSAYVEAMEWGLPPTTGWGMGIERAVMFFTGCER 515

Query: 339 INEVIWT 345
           I++V+  
Sbjct: 516 IDQVLPF 522


>gi|292490715|ref|YP_003526154.1| lysyl-tRNA synthetase-related protein GenX [Nitrosococcus
           halophilus Nc4]
 gi|291579310|gb|ADE13767.1| lysyl-tRNA synthetase-related protein GenX [Nitrosococcus
           halophilus Nc4]
          Length = 331

 Score =  209 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 100/349 (28%), Positives = 156/349 (44%), Gaps = 35/349 (10%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W    +   R  L  R  + + +R +F E   +E+++  L  +P    H+ + +T     
Sbjct: 8   WRPTAN---RRALEARARLLADIRRFFAERGVLEVETPILATAPATAPHLHSLTTHYQGP 64

Query: 70  -DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            +   + L+LQTSPE + K+LLAAG   I+  A  +RNGE G  H PEFT+LEWYR    
Sbjct: 65  QNPEGQRLFLQTSPEHAMKRLLAAGSGPIYQLARVFRNGESGRRHNPEFTLLEWYRPGFD 124

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM++    +                         E ++  EAF  Y  +D+      
Sbjct: 125 HWALMEEVDIFLSLLLGTPKG----------------ERLSYGEAFQHYLEVDVFAASH- 167

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSD---IFSRILIEKIEPNLGINCCTILDRYPAPE 245
                  +L   A+  G +   +            ++   IEP LG      +  YPA E
Sbjct: 168 ------KVLEGLARAHGFQGGTEKGEEARQIALDFLMAAVIEPQLGQGRPCFVYDYPASE 221

Query: 246 SALANIYPADPRF----TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           + LA + P          +RFE+Y   +EL N   EL D  EQR RF+ ++  +K    E
Sbjct: 222 AQLARVRPPSKACSVSLAERFEVYLNGMELANGYHELSDAAEQRQRFQADLAHRKARGLE 281

Query: 302 TYPIDE-DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             P+DE    A    +P  +G+A+G DRL+ML+ G+ +I EV+  P  +
Sbjct: 282 EVPLDELLLAALAQGLPDCAGVALGVDRLLMLLLGSLHIEEVLAFPVDR 330


>gi|262368648|ref|ZP_06061977.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262316326|gb|EEY97364.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 336

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 95/327 (29%), Positives = 153/327 (46%), Gaps = 22/327 (6%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           +  R  + S +R++F E + +E+++  L  +   + H+ +   +  +Q   ++  YLQTS
Sbjct: 26  MRARAQMYSQIRQFFAEREVLEVETPILSQAGVTDVHLASVQAQRHVQGK-QQTHYLQTS 84

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PEF+ K+LLA+G   I+     +R+ E G  H  EFTMLEWYR + S + LM +  +++ 
Sbjct: 85  PEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPNFSLKDLMFEVTDLL- 143

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
                           N         +       ++A +D      NP Q     L    
Sbjct: 144 ----------------NVTLTQRFGEVRPTILSYKHAFMDRLDL--NPLQASLKELKDCC 185

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF--T 259
            + G+ +   D        +    +EP+LG +    L  +P   ++LA     +      
Sbjct: 186 NRVGLNLDLGDDRLGYIDLLFSHFVEPSLGFDTPVFLTDFPPELASLAKTKTDEDGEWVA 245

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQS 319
            RFELY   +EL NA DEL+D    R RFE +  E++K+     PIDE  LA L +M   
Sbjct: 246 ARFELYIEGLELANAYDELIDAEVLRSRFEADNAEREKLGLHVMPIDEFLLAALPQMTAC 305

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
           +GIA+G DRL+M+ T    + +VI  P
Sbjct: 306 AGIALGVDRLLMIATEQMQLEKVITFP 332


>gi|167629422|ref|YP_001679921.1| lysyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592162|gb|ABZ83910.1| lysyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 230

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 10/237 (4%)

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           M+E Y+A+  +  +M+   N++   A+        ++Q    +       + + +A  +Y
Sbjct: 1   MIEIYQAYADFNDMMELTENLVASVAQKVLGTTQITYQGEEIDLTPPWPRLNMLDAIRQY 60

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
           A +D  +        D       A+  G+ V   D+  D+ + +  EK+E +  +     
Sbjct: 61  AGVDFHSI------TDDAAAREAAKSIGVPVNETDSRGDVINTVFEEKVEEH--LVQPRF 112

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  +P   S LA      P+FT RFE++    EL NA  EL DPI+QR RF +++  ++ 
Sbjct: 113 IIGHPVEVSPLAKRNATQPQFTDRFEVFITRRELGNAFSELNDPIDQRERFVRQLALREA 172

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              E + +DEDFL  L   MP + G+ +G DRLVML+T + +I +VI  P  +   +
Sbjct: 173 GDEEAHMMDEDFLNALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVILFPTMRHRDD 229


>gi|90020730|ref|YP_526557.1| serine/threonine protein kinase [Saccharophagus degradans 2-40]
 gi|89950330|gb|ABD80345.1| serine/threonine protein kinase [Saccharophagus degradans 2-40]
          Length = 325

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 89/339 (26%), Positives = 148/339 (43%), Gaps = 22/339 (6%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L  R+ +  ++REYF     IE+D   +      + ++   +  +   
Sbjct: 2   WQPSASA---INLKARSALLRAIREYFYPRAVIEVDPPVIGRHTVTDPYLEPLTVSMGAN 58

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
           + +    YLQTSPE+  K++LA+  E ++    A+R  E G  H PEFTMLEWYR     
Sbjct: 59  NPVG---YLQTSPEYFMKRMLASTGESMYYLGKAFRRDESGRKHSPEFTMLEWYRPGFDD 115

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             L K+ ++++        ++       +         I+  + F     +       NP
Sbjct: 116 IDLRKEVLDLVGYVKNQLAEQGAVVATND----WAVSEISYEDVFNNALGV-------NP 164

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                  L   AQ        DD  +     +    IEPN  +  C  +  +PA +SALA
Sbjct: 165 HTAPVAELKQIAQAKLNVDWDDDHRNTWLDLLFSHLIEPN--LQGCVCVFDFPACQSALA 222

Query: 250 NIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
            +          +RFE+Y   +EL N   EL D  EQR RF  +   + ++      IDE
Sbjct: 223 KVKVRSDGVAVARRFEVYINGVELANGYWELTDAAEQRKRFNADHARRAELGLSLPQIDE 282

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            F+A +   +P+ +G+A+G DRL+M + GA+ +++V+  
Sbjct: 283 AFMAAIEAGLPECAGVALGVDRLLMALLGADKLSDVLPF 321


>gi|302185553|ref|ZP_07262226.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 416

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/282 (23%), Positives = 115/282 (40%), Gaps = 25/282 (8%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG     + F T     + +   ++L+ +PE   K+L+  G EK+F     +RN 
Sbjct: 205 MLQTIPGGAA-AKPFETH---HNALDLEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNE 260

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTMLE+Y+A+  YE  M     + R  A+ V       + +   +      
Sbjct: 261 GVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV 320

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            ++V ++  +Y        L   D  D       A++AG +V   +    +   I  E +
Sbjct: 321 RLSVFDSILKY-----NPELTAADLQDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELV 375

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
           E    +     + +YP   S LA     +P  T RFEL+   
Sbjct: 376 EHK--LEQPHFITQYPFEVSPLARRNDENPNVTDRFELFIGG 415


>gi|220934407|ref|YP_002513306.1| tRNA synthetase class II (D K and N) [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995717|gb|ACL72319.1| tRNA synthetase class II (D K and N) [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 299

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 93/322 (28%), Positives = 150/322 (46%), Gaps = 26/322 (8%)

Query: 30  SSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
           + +R +F     +E+++  L  +   +  +     E ++        YL TSPEF  K+L
Sbjct: 3   AGIRAFFAGRGVLEVETPMLSRAAATDPAL-----ESLVAGTDAGYRYLHTSPEFPMKRL 57

Query: 90  LAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ 149
           LAAG   I+  A  +R GE G  H PEF++LEWYR      +LM +   ++R  A     
Sbjct: 58  LAAGSGDIYQIARVFRAGEAGRYHNPEFSLLEWYRLDFDEHRLMDEVEALVRTLAAA--- 114

Query: 150 KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                     N     E +  AEAF R+A +D       P       L   A   GI  +
Sbjct: 115 ----------NDPGPAERLDYAEAFRRHAGLD-------PFAATVAELSANAADHGIAFS 157

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
            +         ++ + + P         +  YPA ++ALA + P DP    RFEL+  ++
Sbjct: 158 GELDRDGWLDLLMSQVVAPAFPAGRLIFIHGYPASQAALARLRPGDPPTAARFELHWGSL 217

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDR 328
           EL N   EL D  EQ  RF +++  ++       P+D   LA L   +P  +G+A+G DR
Sbjct: 218 ELANGFHELSDADEQAARFARDLAIRQARGLPEVPVDRHLLAALQAGLPDCAGVALGLDR 277

Query: 329 LVMLVTGANNINEVIWTPFSQS 350
           L+M +TGA++I++V+   + ++
Sbjct: 278 LLMCLTGASHIDQVLAFAWDRA 299


>gi|326794184|ref|YP_004312004.1| hypothetical protein Marme_0893 [Marinomonas mediterranea MMB-1]
 gi|326544948|gb|ADZ90168.1| Uncharacterized protein YjeA [Marinomonas mediterranea MMB-1]
          Length = 333

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 89/329 (27%), Positives = 145/329 (44%), Gaps = 17/329 (5%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  +  ++REYF     +E+D+  L     ++ HI   +T        +   +LQ
Sbjct: 14  NTLQARATLLKAIREYFSLENVLEVDTPCLSLGSISDPHIEVLTTTTKTA-GQKVTYFLQ 72

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LL AG   I+     +R  + G  H  EFTMLEWYR    + +LM D   +
Sbjct: 73  TSPEFAMKRLLCAGMPSIYQLGKVFRAEDLGRRHSIEFTMLEWYRLGYDHWKLMDDMAQL 132

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++      +       +         +  +  E F ++ NID       P      +L  
Sbjct: 133 LQFVVGQMS------NHTAIRSELTYDKQSYREVFLKHLNID-------PFTVSIEVLQA 179

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
           Q+ +       +     +   +    IEPN+G      +  YP  ++ALA  Y  D    
Sbjct: 180 QSHRLTEFGLEETDRDTLLELLFSTAIEPNIGQVSPCFVYDYPESQAALAKKYRDDHGNA 239

Query: 260 --KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
              RFELY   +EL N   EL D +EQ  R +++M  + +        D+  ++ L   M
Sbjct: 240 VSARFELYWQGMELANGYYELTDAVEQEARIDQDMSMRLQNKQPDRIADKRLVSALHEGM 299

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           P  +G+A+G DRL+ML+    +I++V+  
Sbjct: 300 PTCAGVALGVDRLLMLLVDKAHIDQVMPF 328


>gi|255024380|ref|ZP_05296366.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 230

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 69/237 (29%), Positives = 110/237 (46%), Gaps = 10/237 (4%)

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           FTMLE Y A+E YE +M     ++     +V      ++     +       I +A+A  
Sbjct: 1   FTMLESYAAYEDYEDVMNLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWRRIHMADAVK 60

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
            Y  +D      +            A++  + V    T+  I +      +E    +   
Sbjct: 61  EYVGVDFWNVTSD------EEARELAKKHDVPVTEHMTYGHILNEFFETHVEEK--LIQP 112

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           T +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR RFE +M+E+
Sbjct: 113 TFVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKER 172

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           ++  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  P  +  
Sbjct: 173 EQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTNAPSIRDILLFPTMKHR 229


>gi|119189761|ref|XP_001245487.1| hypothetical protein CIMG_04928 [Coccidioides immitis RS]
          Length = 535

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 76/336 (22%), Positives = 131/336 (38%), Gaps = 29/336 (8%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ I   +R +F+E +FIE+++     +       R F       + + + L L+
Sbjct: 209 DILRARSSIVQHIRNFFLERRFIEVNTPI-IAAAAGGAIARPF--HTTASESVEQLLALR 265

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G ++IF    ++RN      H PEFT  E+Y+A    E LM+    +
Sbjct: 266 IAPELWLKRLIVGGFDRIFEIGPSFRNEGLDKTHNPEFTTCEFYQAFADLECLMQMTETL 325

Query: 140 IRC---AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           +          N+K+ +   +  +  +    I    A          T  D         
Sbjct: 326 LSGLSQNIRELNEKLGTLHPIYVDFSTPFRRIDFVPALESAMGH---TLPDLKSDGATLK 382

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
           +        I +    +   +  ++    +EP       T +  +P   S          
Sbjct: 383 MVELLNTMSIPLPDHVSLPRLLDKLCAVYLEPQCKD--PTFIINHPEFVS---------- 430

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACLT- 314
               R EL+    E+ N  +E   P EQR +FE+++  +     E    +DE +L  L  
Sbjct: 431 ---ARAELFVEGKEVVNTYEEENSPFEQRRKFEEQLSYR---DPENPGELDESYLQALEW 484

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +P + G   G DRL ML TGA  I +V+     +S
Sbjct: 485 GLPPTGGWGCGIDRLCMLFTGARRIGDVLSFGNLRS 520


>gi|225076424|ref|ZP_03719623.1| hypothetical protein NEIFLAOT_01469 [Neisseria flavescens
           NRL30031/H210]
 gi|224952272|gb|EEG33481.1| hypothetical protein NEIFLAOT_01469 [Neisseria flavescens
           NRL30031/H210]
          Length = 228

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 9/235 (3%)

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPEYITVAEAFARY 177
           M+E+Y A   YE++M+   +IIR A+   N     ++     +  S  E +T+ EA  +Y
Sbjct: 1   MIEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKKY 60

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
                     +    D   L  +  + G  +        +   +     E    +   T 
Sbjct: 61  -----NPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGK--LWNPTF 113

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  YP   S LA    + P  T+RFEL+    EL N   EL DP +Q  RF+ ++ +K  
Sbjct: 114 IVDYPVEVSPLARASDSKPGLTERFELFVVGRELANGYSELNDPEDQAERFKAQVAQKDA 173

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
             +E    D D++  +   +P + G  +G DRLVML+T +  I +VI  P  +  
Sbjct: 174 GDDEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE 228


>gi|87118910|ref|ZP_01074809.1| hypothetical protein MED121_17824 [Marinomonas sp. MED121]
 gi|86166544|gb|EAQ67810.1| hypothetical protein MED121_17824 [Marinomonas sp. MED121]
          Length = 325

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 102/340 (30%), Positives = 154/340 (45%), Gaps = 28/340 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            W    +      L  R  +   +RE+F +   +E D+  L  S  ++ +I   ST+   
Sbjct: 6   LWQPSANM---QMLQVRAKLLRDIREFFWQRDIMEADTQVLSLSSISDPYIEVLSTQAKC 62

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
              +    YLQTSPEF+ K+LLA+G   I+  + A+R  EQ   H  EFTMLEWYR    
Sbjct: 63  L-GLEHTYYLQTSPEFAMKRLLASGSGCIYQVSKAFRKEEQSKQHSIEFTMLEWYRVGLD 121

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             QLM +    +   ++              +P    +Y +  EAF  YA+ID       
Sbjct: 122 DWQLMAEVEEFLINVSQ--------------DPSLRCDYKSYQEAFLTYADID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P     + L   A +       +     +   +    IEP +G +    +  YPA ++AL
Sbjct: 161 PFNVTLNELQTLAVETSGYGQEETDKDILLDVLFSNLIEPKIGQDRPCFIHSYPASQAAL 220

Query: 249 ANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           A I  +       KRFELY   +EL N   EL DPIEQ  RFEK+   +     E   +D
Sbjct: 221 AKIKHSFEGHETAKRFELYWRGMELANGYHELTDPIEQARRFEKDNALRSAQGKEVRALD 280

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           ++ LA L   +P  +G+A+G DRL+M +   ++I  V+  
Sbjct: 281 KNLLAALESGLPNCAGVALGVDRLLMALNQVDDIEMVMPF 320


>gi|169616432|ref|XP_001801631.1| hypothetical protein SNOG_11387 [Phaeosphaeria nodorum SN15]
 gi|160703180|gb|EAT81095.2| hypothetical protein SNOG_11387 [Phaeosphaeria nodorum SN15]
          Length = 506

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 73/340 (21%), Positives = 132/340 (38%), Gaps = 21/340 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R ++   +R YF+ + F+E+++ +   + G     R F T  I  +     + L+
Sbjct: 171 DVLRLRALVYDYIRTYFISSGFLEVETPTFDVNAGGAI-ARPFET--IANELSNTSVRLR 227

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE + K+++  G++KIF    A+RN      H PEF+  E+Y    +   ++     +
Sbjct: 228 IAPELNLKRMIIGGQDKIFEIGRAFRNEGVDNTHNPEFSTCEFYEVGATLPDVIARTEQL 287

Query: 140 IRCAAEVANQKIFSFQN----VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
           I            ++         +       +       + +   L   L      +  
Sbjct: 288 IHGLHTAVESLRSTYFPTLAAPEVDFSGPFAQLPFIPTIEKESGRKLPDLLSPHASNEIL 347

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            ++   +   I V  + T   +   +  + IEP       T +  +P   S L +    D
Sbjct: 348 DMF---KDLDISVPPNPTLPRLLDVLAEQYIEPLCV--KPTFITHHPEALSPL-SKSYLD 401

Query: 256 P----RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
           P    R   R EL+  + E  NA +E   P EQR +F +++            +DE +L 
Sbjct: 402 PATSQRVASRVELFINSREYVNAYEEENSPFEQRRKFMQQLDFHVDG---EGAMDESYLE 458

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L   MP + G   G DRLVML      I +V+     ++
Sbjct: 459 ALEWGMPPTGGWGCGLDRLVMLFASKKRIADVLPFGTLRN 498


>gi|322712058|gb|EFZ03631.1| lysyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 616

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 86/393 (21%), Positives = 153/393 (38%), Gaps = 48/393 (12%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           M QIP +   +       R             L  R  I   +R++F   +F+E  +  L
Sbjct: 214 MEQIPEK-LTDPKARMADRHVDMLVNREVVDVLRLRAEITKFMRDHFHSKRFLEFQTPIL 272

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             + G     R F T+       +K L L+ +PE   K+L+  G +K+F    A+RN   
Sbjct: 273 AENAGGAV-ARPFVTQATEFR--KKDLALRIAPELWLKRLVVGGVDKVFEIGPAFRNEGV 329

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNII----RCAAEVANQKIFSFQNVNCNPFSEP 165
              H PEFTM E+Y A+ +   L+K+   ++    +   E+ + ++ +   ++ + F  P
Sbjct: 330 DATHNPEFTMCEFYSAYTNLADLIKETEELLFGLAKHTQELISTQLTTLPPIDLSRFVRP 389

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
                       A       L + D     L  L+     +     ++   +  R+    
Sbjct: 390 FRQIEFIPGLEEAMGIRFPKLSSDDALPELLAVLKLAGITVPGEVPNSLPKLLDRLAAVY 449

Query: 226 IEPNLGINCCTILDRYPAPESAL---ANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
           +EP         +  +PA  S L             + R EL+    EL N  +E  DP 
Sbjct: 450 LEPMSFHEP-IFITNHPACMSPLAKGFLCPKTYQLVSARAELFVGGRELANMYEEENDPE 508

Query: 283 EQRHR----------------FEKEMQEKK-------KIYN-ETYPIDEDFLACLT-EMP 317
           EQ+ +                FE+   E++       ++   E  P+D+ ++  L   +P
Sbjct: 509 EQKRKLAFHRTLVNKPNGEVGFEEAAGEREPTLAEEAEMDEWEGSPLDQSYVKALDFGLP 568

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            + G   G +RLVML +GAN I++ +     ++
Sbjct: 569 PTGGWGCGVERLVMLFSGANRISDCLSFGTLRN 601


>gi|32473374|ref|NP_866368.1| lysine--tRNA ligase genX [Rhodopirellula baltica SH 1]
 gi|32398054|emb|CAD78149.1| lysine--tRNA ligase genX [Rhodopirellula baltica SH 1]
          Length = 394

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 90/336 (26%), Positives = 144/336 (42%), Gaps = 29/336 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE-----LIIQDHIRKPL 76
           L +R  +   +R +F +  FIE+    L      +  +     E     L  +       
Sbjct: 81  LRQRAEMLREIRRFFDDRGFIEVQPPCLSRDCVVDAFLDPIEVESSQVGLFGELDSPTKF 140

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           YLQTSPE + K+LLA G   I+     +R GE G  H  EF+MLEWY         +   
Sbjct: 141 YLQTSPESAMKRLLAEGAPSIYAITPVFRKGETGARHNVEFSMLEWYEVGGDAASAI--- 197

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT-TLDNPDQPDRH 195
                        ++     V        + +T  +AFA++   D     + +       
Sbjct: 198 -------------ELLGNLAVEVLQSPSFKTVTYRDAFAKHLGFDPIEVPIVDLHGLVDE 244

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           +    A+  G+          +   +L E+IEP    +  TIL RYP  ++ALA     D
Sbjct: 245 MDSSLAESIGLDRDA------LLDVLLSERIEPVFANDTPTILTRYPLTQAALAKPCQDD 298

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P+  +RFEL+   +EL N  DELLD  E + R+E   Q +         ++   L  +  
Sbjct: 299 PQCAERFELFYRGVELANGYDELLDADELKKRYEHNNQIRMAHGRPALAVETTLLRAMRQ 358

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +P  SG+A+G DRL+ML   A++I +V+  P +++
Sbjct: 359 GLPACSGVALGIDRLLMLRVDAHSIEDVVPLPTTRA 394


>gi|83648057|ref|YP_436492.1| hypothetical protein HCH_05398 [Hahella chejuensis KCTC 2396]
 gi|83636100|gb|ABC32067.1| Truncated, possibly inactive, lysyl-tRNA synthetase (class II)
           [Hahella chejuensis KCTC 2396]
          Length = 318

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 159/345 (46%), Gaps = 32/345 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           QP W           L KR      +R +F   Q +E+D+  L      + ++ +F    
Sbjct: 3   QPDWRPSAAI---DTLRKRADFVKRIRAFFDARQVLEVDTPLLSSVTATDLNLDSFDV-- 57

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                  +P YL TSPE + K+LLAAG   I+    A+R GE G  H PEF MLEWYR  
Sbjct: 58  --ISADSEPRYLLTSPEHAMKRLLAAGSGPIYQITRAFRRGEIGARHNPEFAMLEWYRPG 115

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
            S + L ++   ++                       + E ++  EAF R+ ++D     
Sbjct: 116 FSLQDLQREVEELLAS----------------LGYEEKAECMSYREAFQRFVDLD----- 154

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
             P +    +L   A QA    A + +  +    ++  ++EP L       +  YP  ++
Sbjct: 155 --PYRAGASVLQEAAAQASGMTASELSRDEALDVLMTHRVEPALKPLGAVFIRDYPPSQA 212

Query: 247 ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           ALA +           RFELY   +E+ NA DEL+DP+EQR RFE++   +        P
Sbjct: 213 ALARVGEDAEGDAVAFRFELYINGVEIANAYDELIDPVEQRRRFEEDNIARSAAKKPVIP 272

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +DE  LA L  MP+SSGIA+G DRL M++ G + + +V+  P  +
Sbjct: 273 VDERLLAALPYMPESSGIALGVDRLFMVLEGKSRLEDVLGFPADR 317


>gi|88705248|ref|ZP_01102959.1| lysyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700338|gb|EAQ97446.1| lysyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 318

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 27/333 (8%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ +  ++R +F + Q +E+D+  L      +  I       +        ++LQ
Sbjct: 11  AALQARSRLLGNIRAFFAQRQVLEVDTPILARFGVTDPAIEPLR--SVASAPEGASMFLQ 68

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           +SPEF+ K+LLAAG   I+    A+R+GE G  H PEFT+LEWYR     ++L+++   +
Sbjct: 69  SSPEFAMKRLLAAGSGPIYQLGKAFRHGEVGARHNPEFTLLEWYRPGLPAKELIREVAEL 128

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +                  C    +   ++    F     +D      +       L  +
Sbjct: 129 V----------------CECLDRDDWSVVSYGALFEEVLGLDPWAVSAS------ELKAV 166

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD-PRF 258
            A Q  +     D        ++   IEP+L +     +  YP  ++ALA     D  R 
Sbjct: 167 AAGQLDVGTLDLDYDG-WLDLLMSHVIEPSLALRGLLFVCDYPPSQAALAGCTDRDGRRV 225

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
            +RFELY   IEL N   ELLD  E   R  ++ + ++    E   +D   +A +   +P
Sbjct: 226 AERFELYVDGIELANGYQELLDVWELEQRAAQDNERRRAGGQEERALDSRLVAAMKEGLP 285

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             SG+A+G DRL+M   G + ++ V+   +S++
Sbjct: 286 PCSGVALGVDRLLMAQLGVDRLSAVMPFDWSRA 318


>gi|322419667|ref|YP_004198890.1| lysyl-tRNA synthetase-like protein GenX [Geobacter sp. M18]
 gi|320126054|gb|ADW13614.1| lysyl-tRNA synthetase-related protein GenX [Geobacter sp. M18]
          Length = 303

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 122/330 (36%), Positives = 166/330 (50%), Gaps = 39/330 (11%)

Query: 16  YRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP 75
            RR   L +R  I + +R +F E  ++E+++     +P  E  I A  ++          
Sbjct: 8   ARRSQALAQRGAIFNRVRAFFQEKGYLEVETPFRIPAPAPEAQIDAIPSDG--------- 58

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
            ++QTSPE   K+LLAAG  +IF     WRNGE+G  H  EFTMLEWYRA   Y  LM  
Sbjct: 59  WFMQTSPELCMKRLLAAGYPRIFQICRCWRNGERGSRHLSEFTMLEWYRAEADYRVLM-- 116

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
                      A  +  S++ +  +     E ITVA+AF RY  I               
Sbjct: 117 -NETEALIKAAAAAEKISYRGLQIDLALPWERITVADAFRRYTGI--------------- 160

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
               +A  AG            F  +L+EKIEP LGI     L  YPA  SALA +   D
Sbjct: 161 -TAEEALAAGS-----------FDELLVEKIEPQLGIERPAFLYDYPASCSALARLKAED 208

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           P   +RFELY   +E+ NA  EL+DP+EQR RFE E  E+       YP+ E FLA L  
Sbjct: 209 PSVAERFELYIGGLEIANAFSELIDPVEQRARFEAEAAERAAQGKHAYPMPEKFLAALAG 268

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           MP+++GIA+G DRLVM++  A +I++V+  
Sbjct: 269 MPEAAGIALGLDRLVMVLLDAESIDDVVAF 298


>gi|39996852|ref|NP_952803.1| lysyl-tRNA synthetase-related protein [Geobacter sulfurreducens
           PCA]
 gi|39983740|gb|AAR35130.1| lysyl-tRNA synthetase-related protein [Geobacter sulfurreducens
           PCA]
 gi|298505866|gb|ADI84589.1| lysine adenylyltransferase [Geobacter sulfurreducens KN400]
          Length = 307

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 113/317 (35%), Positives = 160/317 (50%), Gaps = 37/317 (11%)

Query: 16  YRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP 75
            RRR  L  R  I + +R +FVE  ++E+++     +P  E+HI               P
Sbjct: 8   ARRRSALWARARILAEIRRFFVEGGYLEVETPLRIPAPAPESHIDPV---------PSGP 58

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
            +LQTSPE   K+L+AAG E++F  +  WR+GE+G +H PEFTMLEWYRA   Y  LM +
Sbjct: 59  WFLQTSPELCMKRLVAAGYERVFQISRCWRDGERGNMHLPEFTMLEWYRAGTDYRGLMNE 118

Query: 136 CMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
           C  ++   A      ++ + +  N    +  E ++VAEAF RY               DR
Sbjct: 119 CEELVGAVAAALGMGEVLNVKGRNIRLGAPWERLSVAEAFERYC--------------DR 164

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A              D F   ++  IEP LG    T +  YPA   ALA +   
Sbjct: 165 TMEEALAN-------------DTFDECMVNDIEPRLGFATPTFICDYPADRGALARLKQD 211

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           +P   +RFELY   +EL NA  EL DP+EQR RFE+E   ++       P+ E FLA L 
Sbjct: 212 EPSRAERFELYIAGVELANAFSELTDPVEQRSRFEQEKLFRESRGKSAIPLPEPFLAELH 271

Query: 315 EMPQSSGIAMGFDRLVM 331
            +P ++GIA+G DR+VM
Sbjct: 272 HLPPTAGIALGIDRMVM 288


>gi|225680694|gb|EEH18978.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 594

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/381 (21%), Positives = 141/381 (37%), Gaps = 55/381 (14%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ I   +R +F    F+E+++  L    G     R F T     +   +PL L+
Sbjct: 214 DILRTRSAIIQYIRNFFFNRSFMEVETPILASVAGGAV-ARPFQT--CATEFPDRPLALR 270

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGE------------------------------- 108
            +PE   K+L+  G +K+F    ++RN                                 
Sbjct: 271 IAPELWLKRLVVGGFDKVFEIGPSFRNEGTSYPYIRFFISPMILCISGHPNWDITSLRPP 330

Query: 109 --QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN----VNCNPF 162
                 H PEFT  E+Y A+   E L+    +++   ++  +    + Q+          
Sbjct: 331 LGLDNTHNPEFTTCEFYHAYADLETLISITESLLTGLSQHIHTLHQTIQSSLSLPPAPFT 390

Query: 163 SEPEYITVAEAFARYANIDLGT-TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
           +    +    A  +  +  L   T  +   P   +  L        +  + T   + +R+
Sbjct: 391 TPFRRLDFIPALEQAMSHKLPNLTPTSTHNPTTQIHELFNNHLNQPLPSNPTLPRLLNRL 450

Query: 222 LIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRF-TKRFELYACNIELCNACDEL 278
               +EP       T++  +P   S    + I+P   +    R EL+  + E+ N  +E 
Sbjct: 451 SSIYLEPQCKE--PTLIINHPECLSPLSKSFIHPQCGQVVAARAELFIDSREVMNMYEEE 508

Query: 279 LDPIEQRHRFEKEM--QEKKKIYNETYPI------DEDFLACLT-EMPQSSGIAMGFDRL 329
             P EQR +FE ++  Q K+               DE +L  L   +P + G   G DRL
Sbjct: 509 NSPFEQRRKFEGQVGVQGKEMGCGVGSGEGGGKVGDESYLRALQWGLPPTGGWGCGVDRL 568

Query: 330 VMLVTGANNINEVIWTPFSQS 350
            ML TGA  I +V+     +S
Sbjct: 569 CMLFTGARRIGDVLSFGNLRS 589


>gi|163785086|ref|ZP_02179800.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879644|gb|EDP73434.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 238

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 10/246 (4%)

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPEY 167
               H PEFTM+E+Y A+  Y  LM+    ++R    +       +++    +       
Sbjct: 1   IDTTHNPEFTMVEFYAAYLDYNDLMEITEELLRKILLDTVGTLKITWEGQELDFEKPFRR 60

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +   +A       D    L      D       A++ GI+ A + T S I  ++    IE
Sbjct: 61  LAFFDALKEKTGKDKEFFL------DEEKARDFAKEVGIQKADELTHSKILDKLFEHFIE 114

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA  +  DP   +RFEL     E+ NA  EL DP +Q+ R
Sbjct: 115 E--DLIQPTFVIDFPKILSPLAKTHRNDPDLVERFELIVNKKEIANAYTELNDPEDQKER 172

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F ++++EK +  +E   IDE+FL  L   +P ++G  +G DRLVM++    +I EVI  P
Sbjct: 173 FLQQLKEKAQGDDEAMEIDENFLMALEYGLPPTAGEGIGIDRLVMMLVDTPSIREVILFP 232

Query: 347 FSQSNQ 352
             +  +
Sbjct: 233 TLRPEK 238


>gi|327539714|gb|EGF26320.1| lysyl-tRNA synthetase family protein [Rhodopirellula baltica WH47]
          Length = 364

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 89/336 (26%), Positives = 143/336 (42%), Gaps = 29/336 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE-----LIIQDHIRKPL 76
           L +R  +   +R +F +  FIE+    L      +  +     E     L  +       
Sbjct: 51  LRQRAEMLREIRRFFDDRGFIEVQPPCLSRDCVVDAFLDPIEVESSQVGLFGELDSPTKF 110

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           YLQTSPE + K+LLA G   I+     +R GE G  H  EF+MLEWY         +   
Sbjct: 111 YLQTSPESAMKRLLAEGAPSIYAITPVFRKGETGARHNVEFSMLEWYEVGGDAASAI--- 167

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT-LDNPDQPDRH 195
                        ++     V        + +T  + FA++   D     + +       
Sbjct: 168 -------------ELLGNLAVEVLQSPSFKTVTYRDTFAKHLGFDPIEIPIVDLHGLVDE 214

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           +    A+  G+          +   +L E+IEP    +  TIL RYP  ++ALA     D
Sbjct: 215 MDSSLAESIGLDRDA------LLDVLLSERIEPVFANDTPTILTRYPLTQAALAKPCQDD 268

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P+  +RFEL+   +EL N  DELLD  E + R+E   Q +         ++   L  +  
Sbjct: 269 PQCAERFELFYRGVELANGYDELLDADELKKRYEHNNQIRMAHGRPALAVETTLLRAMRQ 328

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +P  SG+A+G DRL+ML   A++I +V+  P +++
Sbjct: 329 GLPACSGVALGIDRLLMLRVDAHSIEDVVPLPTTRA 364


>gi|85711840|ref|ZP_01042895.1| Truncated class II lysyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694237|gb|EAQ32180.1| Truncated class II lysyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 319

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 24/327 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L KR  +   LR +F E   +E+D+  L      + HI   ST     +      YLQ
Sbjct: 11  NVLKKRAELLRQLRSFFFERDVLEVDTPLLCQHGVTDRHIENLSTRDSQHNL----RYLQ 66

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPE++ K+LLA     ++  +H  R+   G  H PEF MLEWYR     +QL+ +   +
Sbjct: 67  TSPEYAMKRLLAQYGHSLYQLSHVVRDDPVGRHHNPEFMMLEWYRVGFDDDQLIAEIGEL 126

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +   A+                      +T  +AF ++   D  T         R     
Sbjct: 127 LMTVADA----------------PPLVKLTYQDAFLQHMQCDPLTPAGIKAIHQRLKDDE 170

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
           + +     +A +     I        +EP L ++  T +  +PA ++ALA I   +P   
Sbjct: 171 RTKDW---MASESDVDTILQVAFNLYVEPQLSLSQPTAITHFPASQAALAQIDSKNPSVA 227

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           +RFE+Y   IEL N   EL D +EQ  RF K++  +++        D   +A L   +P 
Sbjct: 228 RRFEIYWEGIELANGYYELSDSVEQSLRFNKDIAARERAQLPYRAADCFLIAALEHGLPP 287

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWT 345
            +G+AMGFDRL+M+ T   +I  VI  
Sbjct: 288 CAGVAMGFDRLLMIKTKETSIERVIPF 314


>gi|57234352|ref|YP_181595.1| lysyl-tRNA synthetase-related protein [Dehalococcoides ethenogenes
           195]
 gi|57224800|gb|AAW39857.1| lysyl-tRNA synthetase-related protein [Dehalococcoides ethenogenes
           195]
          Length = 309

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 94/327 (28%), Positives = 143/327 (43%), Gaps = 37/327 (11%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L +R  I   +R +F E  F+E+++     +   E +I+    +           YL 
Sbjct: 14  DNLKRRMQILGWIRSFFNEQGFLEVETPVFVPAVAPERYIKPVECQSG---------YLS 64

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPE   K++LAAG  KI+  +  +R+GE+G  H PEF++LEWYRA   Y Q++KD  N+
Sbjct: 65  TSPELYMKRMLAAGYAKIYQISRCFRDGEKGRQHNPEFSLLEWYRAGADYLQMIKDTENL 124

Query: 140 IRCAAEVANQKIFSFQN-VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
               A   + K          +     + ITV +AF   A  D  +  D     D  +L 
Sbjct: 125 FHYIAIKLSGKPLVRYMAKEIDLMPPWKRITVQDAFLTAAGWDPLSVDDEKRFDDDLVL- 183

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
                                     K+ P+      T+L  YPA  ++LA I    P  
Sbjct: 184 --------------------------KVIPSFPSEQPTVLMDYPAKMASLARIKETKPEV 217

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +R E +   +E+ NA  EL DP+EQ  RF  E +  +   N      + FL  +  +P 
Sbjct: 218 AERAEFFISGLEMANAYSELTDPLEQASRFAGEKRLIETEQNRRVVSPDKFLESMKYLPA 277

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWT 345
            +G A+G DRLVM     ++I +VI  
Sbjct: 278 CAGNALGIDRLVMFFCNTDSIQDVIPF 304


>gi|90416987|ref|ZP_01224916.1| lysyl-tRNA synthetase-related protein [marine gamma proteobacterium
           HTCC2207]
 gi|90331334|gb|EAS46578.1| lysyl-tRNA synthetase-related protein [marine gamma proteobacterium
           HTCC2207]
          Length = 318

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 90/343 (26%), Positives = 150/343 (43%), Gaps = 35/343 (10%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L +R+ + S LR +F + Q IE+D   L  +   + +I +        
Sbjct: 7   WQPGTSM---AILRQRSRVLSELRNFFQQRQVIEVDVPLLSRATVTDQNIDSIQ----AH 59

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
           +      YLQTSPE+  K+LLA+G   I+    A+R  E G  H PEFT+LEWYR     
Sbjct: 60  NA-ETDAYLQTSPEYFMKRLLASGSGDIYSLGKAFREAESGRRHNPEFTLLEWYRCGWDE 118

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            QLM +   +I                            + A+ F ++  +D       P
Sbjct: 119 HQLMDEVAELIAVLLPGI----------------AVRRCSYADVFIQHLQVD-------P 155

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
              D   L   A         ++T ++    +    IEP L  +   ++  YPA ++ALA
Sbjct: 156 HLVDLADLQSLAVATSSEAWAEETRANCLDLLFSVLIEPQLE-DGLVLVYDYPACQAALA 214

Query: 250 NIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                      ++RFE +   +EL N   EL D  EQ  RF ++ ++++         D+
Sbjct: 215 KCAEDSQGRQISRRFEGFLNRVELANGYCELTDAAEQADRFAEDQRQRRLSDKAAVTADQ 274

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             LA +   +P+ +G+A+G DRL+M + GA++I++V+   + +
Sbjct: 275 RLLAAMESGLPECAGVALGVDRLLMQLQGADSIDQVMPFSWDR 317


>gi|258565823|ref|XP_002583656.1| hypothetical protein UREG_06623 [Uncinocarpus reesii 1704]
 gi|237907357|gb|EEP81758.1| hypothetical protein UREG_06623 [Uncinocarpus reesii 1704]
          Length = 937

 Score =  202 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 74/316 (23%), Positives = 130/316 (41%), Gaps = 19/316 (6%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           L  R+ I   +R +F+E  F E+ +  +  + G  T  R F       +   + L L+ +
Sbjct: 82  LKARSSIIQHIRNFFLERNFTEVSTPIIASAAGGAT-ARPF--HTTASESPDRLLALRIA 138

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI-- 139
           PE   K+L+  G ++IF    ++RN      H PEFT  E+Y+A    E+LM+   +I  
Sbjct: 139 PELWLKRLIVGGFDRIFEIGPSFRNEGLDKTHNPEFTTCEFYQAFADLERLMQMTRSILA 198

Query: 140 -IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
            I    +  N+K+ +    N +  S  + +    A        L     +    +   L+
Sbjct: 199 GISHDIKQLNEKLGTLNPTNADFNSPFQQLDFIPALESAIGRPLPDLKSDDATANVVNLF 258

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY---PAD 255
                  + +    +   +  ++    +EP       T +  +P   S LA  +     +
Sbjct: 259 NT---LALPLPDHISLPRLLDKLCSAYLEPRC--ENPTFIINHPECMSPLAKSHIHPTCN 313

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACLT 314
              + R EL+    EL N  +E   P EQR +FE+++  +     E    +DE +L  L 
Sbjct: 314 QVVSARAELFVEGKELVNMYEEENSPFEQRRKFEEQLSYR---DPENPGELDEGYLQALE 370

Query: 315 -EMPQSSGIAMGFDRL 329
             +P + G   G DRL
Sbjct: 371 WGLPPTGGWGCGIDRL 386


>gi|93005130|ref|YP_579567.1| lysine--tRNA ligase [Psychrobacter cryohalolentis K5]
 gi|92392808|gb|ABE74083.1| Lysine--tRNA ligase [Psychrobacter cryohalolentis K5]
          Length = 340

 Score =  202 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 92/329 (27%), Positives = 149/329 (45%), Gaps = 15/329 (4%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
               +R  + S +R++F   Q +E+ +  L  +   +T +++ + ++  QD      YL 
Sbjct: 21  AMAQQRAKLMSVIRQFFAMRQVLEVQTPLLSQAGNTDTFLQSVAAQVTYQDK-PCTYYLH 79

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+ +  I+     +R+ E G  H  EFTMLEWY+ + S + L  +   +
Sbjct: 80  TSPEFAMKRLLASWQVPIYQICPVFRDNEIGARHNIEFTMLEWYQPNYSLDGLAAELGEL 139

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +     V    I        + F +   I           +            D+ L+  
Sbjct: 140 LE---MVYGHPIIMSHYRYVDAFMDFVGIHP---------LTASLAALQAVAEDKDLIGF 187

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPR 257
               A    +  D        +    +EPNLG +  T++  YP   +A     I     +
Sbjct: 188 DFNSAESCDSEQDRRQSWLDLLFSHAVEPNLGHDLPTLIIEYPPATAALAKTAIDKEGNK 247

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
             KRFELY   IE+ NA DEL D    R RFE++ + + +      PIDE  +A   ++ 
Sbjct: 248 VAKRFELYIKGIEIANAYDELADGQALRERFEQDNKLRGRHNLPQMPIDEHLIAASDDLI 307

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             SGIA+G DRL+M++T A ++ EVI  P
Sbjct: 308 PCSGIAVGLDRLLMVLTDATSLEEVISFP 336


>gi|46107986|ref|XP_381051.1| hypothetical protein FG00875.1 [Gibberella zeae PH-1]
          Length = 581

 Score =  202 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 85/399 (21%), Positives = 150/399 (37%), Gaps = 55/399 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           M QIP +   +     + R             L  R  I   +R+YF   +F+E  +  L
Sbjct: 155 MEQIPEK-LTDPKTRMQERHVDMLVNREAIDVLRLRAEITKYMRDYFHSKRFLEFQTPIL 213

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             + G     R F T         K L L+ +PE   K+L+  G +K+F    ++RN   
Sbjct: 214 AQNAGGAV-ARPFVTRATEFK--DKDLALRIAPELWLKRLVIGGVDKVFEIGPSFRNEGV 270

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-----FQNVNCNPFSE 164
              H PEFTM E+Y A+ + E L+K+   I+   A+ + + I +                
Sbjct: 271 DATHNPEFTMCEFYSAYTNLEDLIKETEEILCGLAQHSQELISTELTALPPIDMSRFVRP 330

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            + +    A      +     L +PD     L  L+     I      + + +  R+   
Sbjct: 331 FKRVEFVPALQEALGL-RLPKLSSPDALPEVLAILKLSGIEIPGEVPSSLAKLLDRLAAI 389

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPR---FTKRFELYACNIELCNACDELLDP 281
            +EP +      ++  +PA  S LA  +         + R EL+    EL N  +E  DP
Sbjct: 390 YLEP-MSFTEPVLIMNHPACMSPLAKSFVCPETLQLVSARAELFIGGRELANMYEEENDP 448

Query: 282 IEQRHRFEK-----------------------------EMQEKKKIYNETYPIDEDFLAC 312
             QR +  +                             + +  +    +  P+D+ F+  
Sbjct: 449 EAQRRKLFEHRHLVNRDDGGIDIEIPKPPEGQDVIQDPQDEPFEDKDGDAAPLDQSFVKA 508

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           L   +P + G   G +R+VML +GA+ I++ +     ++
Sbjct: 509 LDYGLPPTGGWGCGIERMVMLFSGASRISDCLSFGTIRN 547


>gi|254491745|ref|ZP_05104924.1| tRNA synthetase class II (D, K and N) subfamily [Methylophaga
           thiooxidans DMS010]
 gi|224463223|gb|EEF79493.1| tRNA synthetase class II (D, K and N) subfamily [Methylophaga
           thiooxydans DMS010]
          Length = 323

 Score =  202 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 155/342 (45%), Gaps = 35/342 (10%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L +R  + + +R +F E   +E+ +  L  +    T++ +FST+    
Sbjct: 6   WQPSSEL---EILKRRAQLLADVRLFFAERNVMEVQTPVLSQAAPTATYLDSFSTDYAPT 62

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
               +  YLQTSPEF+ K+LLAAG   I+  A  +RNGE G LH PEFTMLEWYR    Y
Sbjct: 63  ---GQHYYLQTSPEFAMKRLLAAGSGDIYQIAPVFRNGELGRLHSPEFTMLEWYRPALDY 119

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             LM +   +++  A        S+Q                        ID  T   +P
Sbjct: 120 VGLMYEVDALLQQLAGFPAAVKISYQQ---------------------LYID--TLQCDP 156

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDI--FSRILIEKIEPN-LGINCCTILDRYPAPES 246
              +   L   A +    +  +           ++ E IEP  L  +   I+  +PA ++
Sbjct: 157 LLAETKTLKSLAFKHIPSLPDNWETDHDGWLELLMSEVIEPQLLNYHAPVIVFDFPASQA 216

Query: 247 A--LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                   P   +   RFE+YA  +EL N  DE LDP+E + RFE++ Q +        P
Sbjct: 217 QLANVYQNPNQQKVAARFEVYAGGLELANGYDECLDPVELKQRFERDNQLRSSQNKTVMP 276

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           IDE  LA     +P  +G+AMG DRL+ML++G   ++EV+  
Sbjct: 277 IDERLLAAQEAGLPACTGVAMGLDRLLMLISGKTQLSEVLSF 318


>gi|322695943|gb|EFY87743.1| putative lysyl-tRNA synthetase (lysine--tRNA ligase) [Metarhizium
           acridum CQMa 102]
          Length = 616

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 84/394 (21%), Positives = 146/394 (37%), Gaps = 50/394 (12%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           M QIP +   +       R             L  R  I   +R++F   +F+E  +  L
Sbjct: 214 MEQIPEK-LNDPKTRMADRHVDMLVNREVVDVLRLRAEITKYMRDHFHSKRFLEFQTPIL 272

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             + G     R F T+       +K L L+ +PE   K+L+  G +++F    A+RN   
Sbjct: 273 AENAGGAV-ARPFVTQATEFR--KKDLALRIAPELWLKRLVVGGVDRVFEIGPAFRNEGV 329

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF-----QNVNCNPFSE 164
              H PEFTM E+Y A+ +   L+K+   ++   A+   + I +                
Sbjct: 330 DATHNPEFTMCEFYSAYTNLADLIKETEELLHGLAKHTQELISTQLTTLPPIDLSRFVRP 389

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
              I           I     L + D     L  L+     +     ++   +  R+   
Sbjct: 390 FRQIEFIPGLEEALGI-RFPKLSSDDALPEVLAVLKLAGITVPGEVPNSLPKLLDRLAAV 448

Query: 225 KIEPNLGINCCTILDRYPAPESAL---ANIYPADPRFTKRFELYACNIELCNACDELLDP 281
            +EP         +  +P   S L             + R EL+    EL N  +E  DP
Sbjct: 449 YLEPMSFHEP-IFITNHPVCMSPLAKGFLCPKTYQLVSARAELFVGGRELANMYEEENDP 507

Query: 282 IEQRHR----------------FEKEMQEKK-------KIYN-ETYPIDEDFLACLT-EM 316
            EQ+ +                FE+   E++       ++   E  P+D+ ++  L   +
Sbjct: 508 EEQKRKLAFHRTLVNKPNGEVGFEEAAGEREPTLAEEAEMDEWEGSPLDQSYVKALDFGL 567

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           P + G   G +RLVML +GAN I++ +     ++
Sbjct: 568 PPTGGWGCGVERLVMLFSGANRISDCLSFGTLRN 601


>gi|148654004|ref|YP_001281097.1| tRNA synthetase, class II (D, K and N) [Psychrobacter sp. PRwf-1]
 gi|148573088|gb|ABQ95147.1| tRNA synthetase, class II (D, K and N) [Psychrobacter sp. PRwf-1]
          Length = 330

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 98/325 (30%), Positives = 151/325 (46%), Gaps = 26/325 (8%)

Query: 24  KRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPE 83
           KR  + ++LR +F E Q +E+ +  +  +   +  + + ST + + D   K  YL TSPE
Sbjct: 24  KRAQLMATLRHFFAERQVLEVQTPLMSQAGNTDVFVPSISTNITVADK-PKTYYLHTSPE 82

Query: 84  FSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
           F+ K++LA  +  ++     +R+ E G  H  EFTMLEWYR   + E L  +  +++   
Sbjct: 83  FAMKRMLATWKVAMYQICSVFRDNEVGRRHNSEFTMLEWYRPGFNLEALAAELSDLLAVV 142

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
                                  + + ++AF  Y  I       +P      L+   A +
Sbjct: 143 ---------------YGQPQPLVHYSYSQAFIDYVGI-------HPLSAGLELIINAANE 180

Query: 204 AGIRVAH-DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRFTK 260
            G+      +        +    +EPNLG +  TI+  YP   +A     I        K
Sbjct: 181 QGLGGLDLGEDRQGWLDVLFSHLVEPNLGHDMPTIITDYPPATAALAKLEIDEQGNEVAK 240

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   IE+ NA DEL D    + RFE +  E+ +      PIDE  +A   E+P  S
Sbjct: 241 RFELYIKGIEIANAYDELADGAALQARFEADNAERIRRGLPVMPIDERLVAACDELPACS 300

Query: 321 GIAMGFDRLVMLVTGANNINEVIWT 345
           GIA+G DRL+M+VTGA +I+EVI  
Sbjct: 301 GIALGVDRLLMVVTGAASIDEVIGF 325


>gi|261415457|ref|YP_003249140.1| tRNA synthetase class II (D K and N) [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261371913|gb|ACX74658.1| tRNA synthetase class II (D K and N) [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302325424|gb|ADL24625.1| tRNA synthetase, class II (D, K and N) [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 323

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 92/331 (27%), Positives = 144/331 (43%), Gaps = 29/331 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R   +KR  + + +R++FV    +E+++  L    G +  +  F  E           ++
Sbjct: 15  RETWVKRQALMARVRDFFVRRNALEVETPVLSAYGGTDPQLDYFEIE-------DPKRFM 67

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            TSPEF  K+LLAA    IF    ++R  E G  H  EF+M+EWYR     ++LM +  +
Sbjct: 68  MTSPEFHMKRLLAAKFGDIFQITKSFRKDEFGGHHNNEFSMVEWYRVGMIQDKLMDEVED 127

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++                               +AF  YA ++           D     
Sbjct: 128 LVSEI---------------IGTKLNARRTRWIDAFKNYAGVNP----FCEKLTDFADAC 168

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADP 256
              +      +   T  D +  +++  +EP L  N    +  YP  ++A     +     
Sbjct: 169 RAREIPVPEKSETLTREDWWDYLMVFLVEPALASNGPEFILDYPPSQAALAQTYVDNEGY 228

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
            + +RFEL+   +ELCN   EL DP+EQR RF  +++ +K +     PIDE FLA L   
Sbjct: 229 TWARRFELFVNQVELCNGYTELTDPVEQRRRFYADLEIRKGMNKPLPPIDERFLAALESG 288

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           MP  SG+A+G DRL ML  G   I +VI  P
Sbjct: 289 MPACSGVALGLDRLFMLALGKEEIADVILFP 319


>gi|160872441|ref|ZP_02062573.1| putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(LysRS) (GX)
           [Rickettsiella grylli]
 gi|159121240|gb|EDP46578.1| putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(LysRS) (GX)
           [Rickettsiella grylli]
          Length = 326

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 100/344 (29%), Positives = 156/344 (45%), Gaps = 28/344 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L  R  +  ++R +F E   +E+++  L ++   + H+ +F T     
Sbjct: 8   WQPTTTL---ALLHLRAKLLKNIRHFFSERHVLEVETPLLSHATVTDPHLHSFQTHYYFD 64

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTMLEWYRAHE 127
           +   ++ LYLQTSPEF+ K+LLAAG   I+  + A+RN  E GC H PEFT+LEWYR   
Sbjct: 65  NAHYQQTLYLQTSPEFAMKRLLAAGSGPIYQISKAFRNHGESGCYHNPEFTLLEWYRPDY 124

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
            + QLM +   +++      +                 E  + AE F  Y N +      
Sbjct: 125 DHHQLMDEVDALLKQLLSCESA----------------ERFSYAEIFQYYLNCNPHELTL 168

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
              +      +L  +   +    D       + ++   IEP L       +  YP   + 
Sbjct: 169 KNLKELTLRFHLTIEHLNLNTIPDY-----LNFLMAHVIEPQLP-KQLVFIYDYPVTLAG 222

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA I        +RFE+Y   IEL N   EL D  EQR RF  ++  +   +    PIDE
Sbjct: 223 LAKIRSDTLPVAERFEVYWKGIELANGFHELNDADEQRLRFMNDLSVRDNYHYTKVPIDE 282

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            FLA L   +P  +G+A+G DRL++L+T    I++VI  P  ++
Sbjct: 283 YFLAALTHGLPDCAGVALGIDRLLLLLTQMKKISDVISFPIQRA 326


>gi|118580184|ref|YP_901434.1| tRNA synthetase, class II (D, K and N) [Pelobacter propionicus DSM
           2379]
 gi|118502894|gb|ABK99376.1| tRNA synthetase, class II (D, K and N) [Pelobacter propionicus DSM
           2379]
          Length = 301

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 109/325 (33%), Positives = 155/325 (47%), Gaps = 37/325 (11%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           L  R  I +++R +F   +F+E+D+  L  +   E +I           H     YL TS
Sbjct: 8   LYLRADIVAAIRSFFASRRFLEVDTPHLIPANAPEEYIDP---------HGSGDRYLHTS 58

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   K+LL  G E+IF     WR  E+G  H PEF MLEWYR    Y QLM+DC  ++R
Sbjct: 59  PEICMKRLLCRGHERIFQICRCWRRDERGSRHLPEFAMLEWYRRDSDYRQLMEDCQELLR 118

Query: 142 CAAEVANQ-KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
             A +  + +   +Q     P  E + ITV +A+ARYA  D+   + +            
Sbjct: 119 WVALICGKSEGIDYQGQRLEPCREAQRITVRDAYARYAVKDVAVAVVDGT---------- 168

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
                            F  +++ +IE +L  +   IL  YPA  ++LA +   D    +
Sbjct: 169 -----------------FDELMVTRIESSLPTHVPVILMDYPAEMASLARLKADDESVAE 211

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   +EL N   EL DP EQR RF    + + +      P+ E FL  L  +P S+
Sbjct: 212 RFELYLGGLELANGFSELNDPREQRQRFLVANERRIEAGLSPLPLPEPFLDELASLPPSA 271

Query: 321 GIAMGFDRLVMLVTGANNINEVIWT 345
           GIA+G DRLVML   A  I++VI  
Sbjct: 272 GIALGIDRLVMLFADAPRIDDVISF 296


>gi|89092068|ref|ZP_01165023.1| lysyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89083803|gb|EAR63020.1| lysyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 322

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 145/345 (42%), Gaps = 30/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L KR  +   +R +F +   +E+D+  + +   ++  I +        
Sbjct: 4   WQPTAEI---EILQKRAELLHQVRCFFKDRNVMEVDTPVMSHCAVSDPFIDSIEVHYKPS 60

Query: 70  DHIRKP-LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  +++QTSPE++ K+LLAAG   I+  +  +RNGE G  H PEFTMLEWYR   +
Sbjct: 61  VEADSTLMFMQTSPEYAMKRLLAAGSGAIYQLSKVFRNGEVGRRHNPEFTMLEWYRPGFT 120

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +   ++R                        E +T ++ F RY           
Sbjct: 121 DTELMDEVEALVR----------------PVLGLQSIERVTYSDLFYRYLGFRPEQVGIE 164

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES-- 246
               +  +      +       D       + ++   IEP+L  +    +  YPA ++  
Sbjct: 165 QLITETRMHIEIELE-------DTDPDTWLNLLMSHVIEPHLTEHEAVFVMDYPASQAAL 217

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           A             RFEL+   +EL N   EL D  EQ+ R + +  ++K++     P+D
Sbjct: 218 AKVRKNAQGVEVAARFELFVRGVELANGYYELTDAKEQKRRLDADQAQRKQLGLPQRPLD 277

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              +  L   +P  +G+A+GFDRL  L +  +++ EV+   F ++
Sbjct: 278 YRLVNALQAGIPDCAGVALGFDRLFWLASDKSSLAEVLPFSFDRA 322


>gi|302927399|ref|XP_003054489.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735430|gb|EEU48776.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 530

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 82/399 (20%), Positives = 143/399 (35%), Gaps = 55/399 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           M QIP +   +     + R             L  R  I   +R++    +F+E  +  L
Sbjct: 116 MEQIPEK-LTDPKTRMQDRHVDMLVNRQAIDVLRLRAEITKHMRDHLHSKRFLEFQTPIL 174

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             + G     R F T         + L L+ +PE   K+L+  G +++F    A+RN   
Sbjct: 175 AENAGGAV-ARPFVTRATEFK--ERDLALRIAPELWLKRLVIGGVDRVFEIGPAFRNEGV 231

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-----FQNVNCNPFSE 164
              H PEFTM E+Y A+ + E L+ +   I+   A+     I +                
Sbjct: 232 DATHNPEFTMCEFYSAYSNLEDLINETEEILCSLAQHCQDLISTKLTSLPPIDMNRFKRP 291

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            + +    A      +     L + D     L  L+     +      + S +  R+  E
Sbjct: 292 FKRVEFVPALEEALGL-RLPKLSSKDALPEMLAVLKLAGIDVPGEVPSSLSKLLDRLAAE 350

Query: 225 KIEPNLGINCCTILDRYPAPESA---LANIYPADPRFTKRFELYACNIELCNACDELLDP 281
            +EP +      ++  +PA  S               + R EL+    EL N  +E  DP
Sbjct: 351 YLEP-MSFTEPILIMNHPACMSPLAKSFLCPNTFQLVSARAELFIGGRELANMYEEENDP 409

Query: 282 IEQRHRF----------------------EKEMQEKKKIYNE-------TYPIDEDFLAC 312
             Q+ +                       E EM   + +            P+D+ F+  
Sbjct: 410 EAQKQKLLDHRNLVNTADGGVAIETPDTQEGEMSALEALDEPFEDEDGDAAPLDQSFVKA 469

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           L   +P + G   G +R+VML +GAN I++ +     ++
Sbjct: 470 LDYGLPPTGGWGCGVERMVMLFSGANRISDCLSFGTLRN 508


>gi|156084320|ref|XP_001609643.1| lysyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796895|gb|EDO06075.1| lysyl-tRNA synthetase, putative [Babesia bovis]
          Length = 522

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/368 (21%), Positives = 143/368 (38%), Gaps = 49/368 (13%)

Query: 1   MHQIPSQPWWNRDF-------------HYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P      +D              +   R  LL+R+ I   LR+      F+E+++ 
Sbjct: 186 LLPMPDGFHGLKDVATRHKLRHLDIMVNEDTRGILLQRSHIIWELRKLLHSKGFVEVETP 245

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK-IFCFAHAWRN 106
            LQ+      + + F T       + + LYL+ +PEF  K+L+  G    IF     +RN
Sbjct: 246 ILQHIYSGA-NAQPFKTRSE---ALDENLYLRIAPEFFLKRLIVGGLGDKIFEIGKCFRN 301

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                 H PEFTM+E Y+   +   ++     II   A+    +           F +  
Sbjct: 302 EGTSARHSPEFTMIEIYQQMANAGDMINLLEEIIETLAKKIGVE-----------FPKFT 350

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA--HDDTWSDIFSRILIE 224
             T+      +  I       N D      L    ++ G+       ++W  + + +   
Sbjct: 351 RKTMVGLIEEHIGI-------NVDLCSSEQLLSILRERGLDTNTLESNSWGSLVATLFKC 403

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +E N  I   T +   P+  S LA    ++    K FE Y   +E+ + C E  +P++ 
Sbjct: 404 AVEDN--ITEPTHVTELPSDISPLAA---SEGSKGKVFESYLQGLEIAHGCTEECNPVQL 458

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
            H+ +        +    +  D + L  +   MP ++GI +G DRLVM ++   +I  + 
Sbjct: 459 LHKLDM-----CGLQGLGHTRDTELLNAVAHGMPPTAGIGIGIDRLVMALSKTTSIKNIQ 513

Query: 344 WTPFSQSN 351
             P  +S 
Sbjct: 514 TFPLLKSE 521


>gi|148360743|ref|YP_001251950.1| lysyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296106192|ref|YP_003617892.1| lysyl tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|148282516|gb|ABQ56604.1| lysyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295648093|gb|ADG23940.1| lysyl tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 317

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 88/343 (25%), Positives = 138/343 (40%), Gaps = 33/343 (9%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L  R  +   +R++F E Q++E+++  +      + ++          
Sbjct: 6   WLPSASI---QLLRARAELIGKIRQFFTERQYLEVETPVMARHGVTDVYLSNIKAIFR-- 60

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
               +  YLQTSPE+  K+LLAAG   IF  A  +R+ E G  H PEFT+LEWY+ H  +
Sbjct: 61  ---GETCYLQTSPEYHMKRLLAAGSGPIFQLARVFRDDELGRWHNPEFTLLEWYQLHIDH 117

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             LM +   +++                           T  +AF     ID  +T    
Sbjct: 118 HVLMDEVDLLLQIIL----------------KSQPMIRKTYQQAFEEACGIDPFSTSIEQ 161

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESAL 248
                    L     G+   H+         ++   +EP     +    +  +PA ++AL
Sbjct: 162 FTKILAQHGL----DGVLSPHEQDRDQYLFLLMSHVVEPFLAEESTPVAVYHFPASQAAL 217

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A +        +RFE+Y   +EL N   EL D   Q+ RF  + Q +K+        D  
Sbjct: 218 AQVNE---GVAERFEVYYQGVELANGFHELTDVEAQKKRFMLDQQHRKQKGLTAMEADAY 274

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L  L   +P  SG+A+G DRL+ L     NI  V    FS+S
Sbjct: 275 LLKALEYGLPPCSGVALGVDRLLALALKQPNIANVFSFDFSRS 317


>gi|297568252|ref|YP_003689596.1| tRNA synthetase class II (D K and N) [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924167|gb|ADH84977.1| tRNA synthetase class II (D K and N) [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 294

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 112/312 (35%), Positives = 156/312 (50%), Gaps = 38/312 (12%)

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +F +  F+E+++  +  +P  E H+                 +LQTSPE   K+LLA G 
Sbjct: 17  FFEQRDFLEVETPLMIPAPAPEPHLLP---------QPAGRWFLQTSPELCMKRLLARGH 67

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
            KIF     +R  E+G  H PEFTMLEWYRA   Y  LM DC  ++   A      +   
Sbjct: 68  AKIFQICKCFRRQERGRRHVPEFTMLEWYRAGADYLALMDDCEQLLTAVAAELA--LPGE 125

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
                +     E +TVAEAF RYA +++   L                            
Sbjct: 126 NGHQVSLVLPWERLTVAEAFCRYAAMEVDEAL---------------------------R 158

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
            D+F ++L+EKIEP+LG+   T L  YP   +ALA   P  P   +RFELY   +EL N 
Sbjct: 159 RDLFDQLLVEKIEPHLGVGRPTFLYDYPLELAALARPKPGQPEVAERFELYLGGVELANG 218

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVT 334
             EL+DP+EQR RFE + +  +       P+ E FLA L  MPQ++GIA+G DRLVM++ 
Sbjct: 219 FSELIDPVEQRRRFEADRRLIRAAGRRPPPMPEPFLAELDAMPQAAGIALGLDRLVMIML 278

Query: 335 GANNINEVIWTP 346
           G  NI++V+  P
Sbjct: 279 GKENIDQVLAFP 290


>gi|224370199|ref|YP_002604363.1| LysS2 [Desulfobacterium autotrophicum HRM2]
 gi|223692916|gb|ACN16199.1| LysS2 [Desulfobacterium autotrophicum HRM2]
          Length = 299

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 112/327 (34%), Positives = 158/327 (48%), Gaps = 37/327 (11%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  I  ++R YF +  F+E+++     +P  E HI +F ++           +LQ
Sbjct: 4   DRLAGRARIVQAMRSYFYDQDFLEVETPIRIPAPAPEAHIDSFESDG---------WFLQ 54

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           +SPE + K+LLA G  +IF     +R  E+G  H  E TMLEWY    +Y +LM  C  +
Sbjct: 55  SSPELAMKRLLARGHNRIFQICKCFRRDERGPRHLTELTMLEWYTKGYTYLELMDQCTAL 114

Query: 140 IRCAAEVAN-QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +R  A     +   S+     +  S  E ITV  AF RY                     
Sbjct: 115 VRHIAVQTGCKDRLSYNGQTIDLASPWEVITVDTAFRRYT----------------ATTL 158

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
            +A   G            F  I+  +IEP LG +  T +  YPA  +ALA + P DP F
Sbjct: 159 ERAMSKGN-----------FDEIMAFEIEPELGRSVPTFIMDYPASMAALARLKPEDPEF 207

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            +RFELY   +EL N   EL DP+EQR RF+ E   + +      P+ E FL  LT MP 
Sbjct: 208 AERFELYIGGMELANGFSELNDPVEQRRRFKAEAAIRARARKPATPMPEPFLKDLTSMPA 267

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWT 345
           ++GIA+G DRLVML T A+ I++V+  
Sbjct: 268 AAGIALGVDRLVMLFTHADTIDKVVAF 294


>gi|301632175|ref|XP_002945166.1| PREDICTED: lysyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 476

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 68/293 (23%), Positives = 123/293 (41%), Gaps = 27/293 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+   +S+RE+ V++ F+E+++ 
Sbjct: 154 LRPMPDKFHGVADQELKYRQRYVDLMTDEAARQRFVARSKAVNSMREFMVQHGFLEVETP 213

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   PG   + R F T+    + + + +YL+ +PE   K+LL  G E++F     +RN 
Sbjct: 214 MLHPIPGGA-NARPFVTQ---HNALEQDMYLRIAPELYLKRLLVGGFERVFEINRNFRNE 269

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E+Y A+ +Y+ LM     ++R  A +       S+Q    +      
Sbjct: 270 GISVRHNPEFTMMEFYAAYWNYQDLMGFTEQLVRNTALKAVGTLQLSYQGRAVDLSQPFA 329

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y               D   L    ++ G+    +   +   + + +   
Sbjct: 330 RLTIREAIYQYT-------EAGAHVDDAVWLVSALKKLGLSEEKNRLSARTLASLQVLYF 382

Query: 227 EPNLGI--NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
           E  +       T +  +P   S LA      P  T+RFELY    E  N   E
Sbjct: 383 EETVEDKLWQPTFIMEHPTEISPLARANDLRPEVTERFELYITGREFGNGFSE 435


>gi|256028802|ref|ZP_05442636.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 242

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 11/239 (4%)

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EFTM+E Y+AH  +  +M     +I    E  N       +         + + + +   
Sbjct: 11  EFTMIELYQAHADFNDMMDIAEGMISTICEKINGTTDIVYDGVQLSLKNFKRVHMVDMIK 70

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINC 234
               +D    +              A++  + +A        I +    +K E    +  
Sbjct: 71  DVTGVDFWKEMT------FEEAKQLAKEHHVEIAPHMNSVGHIINEFFEQKCEEK--VIQ 122

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  +P   S LA     +P FT RFEL+    E  NA  EL DP +QR RFE +++E
Sbjct: 123 PTFVYGHPVEISPLAKRNEDNPNFTDRFELFINKREYANAFTELNDPADQRGRFEAQVEE 182

Query: 295 KKKIYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
             +   E  P IDED++  L   MP + G+ +G DRLVML+TG+ +I +VI  P  +  
Sbjct: 183 ALRGNEEATPVIDEDYVEALEYGMPPTGGMGIGIDRLVMLLTGSPSIRDVILFPQMKPR 241


>gi|71064850|ref|YP_263577.1| putative lysyl-tRNA synthetase, class II [Psychrobacter arcticus
           273-4]
 gi|71037835|gb|AAZ18143.1| putative lysyl-tRNA synthetase, class II [Psychrobacter arcticus
           273-4]
          Length = 342

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 95/328 (28%), Positives = 151/328 (46%), Gaps = 13/328 (3%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
               +R  + S +R++F   Q IE+ +  L  +   +T +++ S ++  QD      YL 
Sbjct: 21  AMAQQRAQLVSVIRQFFATRQVIEVQTPLLSQAGNTDTFLQSVSAQVTYQDK-PYTYYLH 79

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLA+ +  ++     +R+ E G  H  EFTMLEWY+ + S + +  +   +
Sbjct: 80  TSPEFAMKRLLASWQVPMYQICPVFRDNEIGARHNIEFTMLEWYQPNYSLDDMAAELGEL 139

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +                     F     +T + +  +    D G T  +         + 
Sbjct: 140 LEMLYGYPIIMSHYRYVDAFMDFVGIHPLTASLSALQAVGEDKGLTGFD---------FN 190

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPR 257
            AQ   I  +  D        +    +EPNLG +  T++  YP   +A     +     +
Sbjct: 191 SAQSCAID-SEQDRRQSWLDLLFSHAVEPNLGHDLPTLIIEYPPATAALAKTAVDKDGNK 249

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
             KRFELY   IE+ NA DEL D    R RFE++ Q +K+      PIDE  LA   ++ 
Sbjct: 250 VAKRFELYIKGIEIANAYDELADGQALRERFEQDNQLRKRHNLPQMPIDEHLLAASDDLI 309

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWT 345
             SGIA+G DRL+M++TGA  + EVI  
Sbjct: 310 PCSGIAVGVDRLLMVITGAIGLEEVIPF 337


>gi|323176020|gb|EFZ61612.1| lysyl-tRNA synthetase domain protein [Escherichia coli 1180]
          Length = 228

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 9/235 (3%)

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           +E Y A+  Y  L++   ++ R  A+ V      ++     +     E +T+ EA  +Y 
Sbjct: 1   MELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKY- 59

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
                   D  D  +       A+  GI V        I + I  E  E +  +   T +
Sbjct: 60  ----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVAEAH--LIQPTFI 113

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  RF++++  K   
Sbjct: 114 TEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAERFQEQVNAKAAG 173

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  P  +  +
Sbjct: 174 DDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPAMRPQK 228


>gi|302340139|ref|YP_003805345.1| tRNA synthetase class II (D K and N) [Spirochaeta smaragdinae DSM
           11293]
 gi|301637324|gb|ADK82751.1| tRNA synthetase class II (D K and N) [Spirochaeta smaragdinae DSM
           11293]
          Length = 324

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 103/332 (31%), Positives = 153/332 (46%), Gaps = 16/332 (4%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           +R  +L R+ +  ++R +F    F+E+++  L  +   E HI  FST         + LY
Sbjct: 2   QREMILFRSRLNRAVRNFFESKGFLEVETPQLSPTVIPEAHIELFSTRFFSDRFGERELY 61

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SPE   K+L+A G   IF    ++R + +    H PEF+MLEWY    S E+ +   
Sbjct: 62  LLPSPEIHMKQLIAEGSGSIFQICKSFRNDEQMSHYHNPEFSMLEWYAVQGSSEENIATT 121

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             +  C AE  +                   +T+AEAF R+A IDL   L  P       
Sbjct: 122 EELFSCLAETLH-------RDGEYLSPPFRRMTMAEAFDRFAGIDLEKGLSLPG------ 168

Query: 197 LYLQAQQAGIRV-AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L  QAQ AGI +    ++W ++F RI +  +EP L  +   +L+RYPA    LA   P  
Sbjct: 169 LRKQAQAAGIDLRDKQESWEELFHRIFLTHVEPELPADRPLVLERYPAAVEVLAERIPGT 228

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
             +  R+ELY    EL N   E     +    F  +  +K +       ID ++      
Sbjct: 229 -GWLDRWELYVKGTELANCYAEERSQKQVESFFHSQSAQKVQSSRVVPDIDPEYPQIFRN 287

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            P+ SG+A+G DRL ML +GA  I  V+  PF
Sbjct: 288 FPKCSGVALGMDRLAMLFSGAATIEGVMLFPF 319


>gi|285018503|ref|YP_003376214.1| lysyl-tRNA_synthetase_class-2 protein [Xanthomonas albilineans GPE
           PC73]
 gi|283473721|emb|CBA16224.1| probable lysyl-trna_synthetase_class-2 protein [Xanthomonas
           albilineans]
          Length = 329

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 86/320 (26%), Positives = 143/320 (44%), Gaps = 21/320 (6%)

Query: 32  LREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQTSPEFSCKKLL 90
           +R +F     +E+++  L  +   E +I +F T      D      +L+TSPE+  K+LL
Sbjct: 30  IRRFFAARDVLELETPILSAAGNTEPNIESFQTRFSGHVDAGPALRWLRTSPEYPLKRLL 89

Query: 91  AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK 150
           AAG    +     +RNGE G  H PEFTMLEWYR   ++ +L+++ + ++R A  +    
Sbjct: 90  AAGVGDCYELGRVFRNGEAGGRHNPEFTMLEWYRVGWNHLRLVEETVALVREALALV--- 146

Query: 151 IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH 210
                       +  + ++    F     +D         Q     + + A   G     
Sbjct: 147 ---------ARSASLQVLSYRRLFLETLGLDPFVAPLEALQQPLCEIRIDADGLGRD--- 194

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
                D    ++  +++P    +  T++  +PA + ALA +    P   +RFELY    E
Sbjct: 195 -----DWLDLLMTHRLQPGFPADRITVVYDWPASQCALARVRDDAPPVAERFELYLGGYE 249

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLV 330
           L N   EL D  EQR RF ++   +        P+DE  L  L  +P  +G+A+G DRL+
Sbjct: 250 LANGYHELTDASEQRRRFLRDHAVRHARGMPLPPLDERLLQALPGLPDCAGVAVGVDRLL 309

Query: 331 MLVTGANNINEVIWTPFSQS 350
           M + G   I  V+   F+ +
Sbjct: 310 MAMCGTTQIGAVLAYDFAHA 329


>gi|270308173|ref|YP_003330231.1| lysyl-tRNA synthetase, truncated [Dehalococcoides sp. VS]
 gi|270154065|gb|ACZ61903.1| lysyl-tRNA synthetase, truncated [Dehalococcoides sp. VS]
          Length = 309

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 89/335 (26%), Positives = 142/335 (42%), Gaps = 37/335 (11%)

Query: 12  RDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH 71
           R    R +  L +R  I   +R +F E  F+E+++     S   E +I+           
Sbjct: 6   RQRLKRLKDNLKRRMQILGLIRSFFNEQGFLEVETPVFIPSVAPERYIKPIEC------- 58

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +  YL TSPE   K++L AG   I+  +  +R  E+G  H PEF+MLEWYR    Y Q
Sbjct: 59  --QNGYLSTSPELYMKRMLVAGYTTIYQISRCFRAEEKGRHHNPEFSMLEWYRVGTDYLQ 116

Query: 132 LMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++ D  N+    A     + + S+   N +     E  TV +AF   A  +     D   
Sbjct: 117 MITDTENLFYYIAMKLFGKPVVSYLGHNIDLTPPWERKTVHDAFRDIAGWNPIIMDDE-- 174

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                                      F   ++ KI P+   +   +L  YPA  ++LA 
Sbjct: 175 -------------------------KRFDEDIVLKIIPSFPSSRPIVLMDYPAKMASLAR 209

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
           +   +P+  +R E +   +E+ NA  EL D +EQ +RF +E    +   N      + FL
Sbjct: 210 LNKTNPQVAERAEFFISGLEMANAYSELTDHLEQANRFAEEKWLIESEQNRRVVSPDKFL 269

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             +  +P  +G A+G DRLVM     + I +V+  
Sbjct: 270 EAVKHLPVCAGNALGIDRLVMFFCNTDQIQDVMPF 304


>gi|254784869|ref|YP_003072297.1| lysyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|237686219|gb|ACR13483.1| putative lysyl-tRNA synthetase [Teredinibacter turnerae T7901]
          Length = 322

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 92/340 (27%), Positives = 142/340 (41%), Gaps = 31/340 (9%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF-STELII 68
           W           L +R  +   +R +F     +E+D   +  +   + ++ +   T  + 
Sbjct: 3   WQPTATM---DALARRAQMIQQVRAFFAARSVLEVDVPVIGRATVTDLNLDSLCVTRAVG 59

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                   YLQTSPEF  K+LLAAG   I+    A+R  E G +H PEFTMLEWYR    
Sbjct: 60  SAGSTLSGYLQTSPEFFMKRLLAAGSGDIYYLGKAFRADESGRIHNPEFTMLEWYRCGMD 119

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
              L  + +++ R                             A     Y  +    T  N
Sbjct: 120 DRALSDEVVSLCRAIQPGV-----------------------AVVVTEYGAVFEQHTGLN 156

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P       L   A+        D+        +    +EP LG +   ++  +PA + AL
Sbjct: 157 PHTCSTETLADYARAHLGVDWFDEPRGLWLDLLFTHCVEPQLG-DGLVVIRDFPACQCAL 215

Query: 249 ANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           A + P +      +RFE+Y   IEL N   EL+D  EQR RF ++ + +         +D
Sbjct: 216 ARVVPDETGVPVARRFEVYWGGIELANGYWELVDAQEQRARFMQDNKARVAQGKPEMALD 275

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            DFLA L   +P+ +G+A+G DRL+M  +G  +I EV+  
Sbjct: 276 NDFLAALDAGLPECAGVALGVDRLLMCASGCAHIGEVMSF 315


>gi|52840844|ref|YP_094643.1| lysyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|54296627|ref|YP_122996.1| hypothetical protein lpp0658 [Legionella pneumophila str. Paris]
 gi|52627955|gb|AAU26696.1| lysyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|53750412|emb|CAH11806.1| hypothetical protein lpp0658 [Legionella pneumophila str. Paris]
          Length = 317

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 85/343 (24%), Positives = 140/343 (40%), Gaps = 33/343 (9%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L  R  +   +R++F E Q++E+++  +      + ++          
Sbjct: 6   WLPSASI---QLLRARAELIGKIRQFFTERQYLEVETPVMARHGVTDVYLSNIKAIFR-- 60

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
               +  YLQTSPE+  K+LLAAG   IF  A  +R+ E G  H PEFT+LEWY+ H  +
Sbjct: 61  ---GETCYLQTSPEYHMKRLLAAGSGPIFQLARVFRDDELGRWHNPEFTLLEWYQLHIDH 117

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             LM +   +++                           T  +AF     ID  +T    
Sbjct: 118 HVLMDEVDLLLQIIL----------------KSRPMIRKTYQQAFEEACGIDPFSTSIEQ 161

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESAL 248
                    L     G+   ++         ++   +EP     +    +  +PA ++AL
Sbjct: 162 FNKVLAQHDL----DGVLSPNEQDRDQYLFLLMSHVVEPFLAEESTPVAVYHFPASQAAL 217

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A +        +RFE+Y   +EL N   EL D   Q+ RF  + Q +K+        D  
Sbjct: 218 AQVKE---GLAERFEVYYQGVELANGFHELTDVEAQKKRFMLDQQHRKQKGLTAMEADAY 274

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L  L   +P  SG+A+G DRL+ L     +I +++   FS+S
Sbjct: 275 LLKALEYGLPPCSGVALGVDRLLALALKQPSIEKILSFDFSRS 317


>gi|315305583|ref|ZP_07875288.1| lysyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313626048|gb|EFR95475.1| lysyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 216

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 9/210 (4%)

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
             +V      ++   + +       I +A+A   Y  +D      +         +  A+
Sbjct: 14  CEQVNGTTKITYGEYHVDLTPNWRRIHMADAVKEYVGVDFWNVTSD------EEAHKLAK 67

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +  ++V    T+  I +      +E    +   T +  +P   S LA     D RFT RF
Sbjct: 68  EHNVQVTKHMTYGHILNEFFETFVEEK--LIQPTFVYGHPIEISPLAKKNKEDGRFTDRF 125

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
           EL+    E  NA  EL DPI+QR RFE +M+E+++  +E + +D DFL  L   +P + G
Sbjct: 126 ELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGG 185

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           + +G DRLVML+T A +I +++  P  +  
Sbjct: 186 LGIGIDRLVMLLTDAPSIRDILLFPTMKHR 215


>gi|284799900|ref|ZP_06390412.1| lysine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796561|gb|EFC51908.1| lysine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 214

 Score =  199 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 9/221 (4%)

Query: 133 MKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           M+   +IIR A+   N     S+     +  S  E +T+ EA  +Y          +   
Sbjct: 1   MQMAEDIIRNASRAVNGTAKISYNGKEVDLESPFERLTILEAIKKY-----NPHYTDKQL 55

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
            D   L  +  + G  +        +   +     E    +   T +  YP   S LA  
Sbjct: 56  NDEEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAESK--LWNPTFIIDYPVEVSPLARA 113

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
             + P  T+RFEL+    EL N   EL DP +Q  RF+ ++ +K    +E    D D++ 
Sbjct: 114 SDSKPGLTERFELFVVGRELANGYSELNDPEDQAERFKAQVAQKDAGDDEAMHYDADYIR 173

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            +   +P + G  +G DRLVML+T +  I +VI  P  +  
Sbjct: 174 AMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE 214


>gi|218781608|ref|YP_002432926.1| tRNA synthetase class II (D K and N) [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762992|gb|ACL05458.1| tRNA synthetase class II (D K and N) [Desulfatibacillum
           alkenivorans AK-01]
          Length = 299

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 106/325 (32%), Positives = 149/325 (45%), Gaps = 38/325 (11%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           L  R  +   +R +F    F+++++     +P  E HI A               YL TS
Sbjct: 7   LQIRADLLFHIRRFFRSQGFLDVETPIRIPAPIPEAHIDAV---------PSLDWYLHTS 57

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   K+LL+ G EKIF     +R  E G  H PEFTMLEWYR    Y QLM DC N++ 
Sbjct: 58  PESCMKRLLSQGYEKIFQICRVFRAEELGARHLPEFTMLEWYRTDADYNQLMTDCENLLA 117

Query: 142 CAAEVANQKIFSFQNVNCNPFSE-PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
              E    +            S      +V++AF +YA +     L+             
Sbjct: 118 FCLESMPDRAPLVYQGKRIDASPSWRRESVSDAFRKYAGMSAEEALET------------ 165

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
                          D F  ++   +EP LG++    L  YP  ++ALA   P DP   +
Sbjct: 166 ---------------DRFDEVMAFMVEPALGLDPV-FLYDYPIQKAALARPKPEDPNLAE 209

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   +E+ NA  EL+DP+ Q  RF+ E +E+     + YP +E FL  L  MP S+
Sbjct: 210 RFELYIGGMEMANAFSELVDPVVQAERFKMEEEERVLAGKKPYPSNEKFLCALETMPPSA 269

Query: 321 GIAMGFDRLVMLVTGANNINEVIWT 345
           GIA+G DRL ML  GA +I ++   
Sbjct: 270 GIALGVDRLAMLFAGAADIAQISAF 294


>gi|300087982|ref|YP_003758504.1| class II tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527715|gb|ADJ26183.1| tRNA synthetase class II (D K and N) [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 300

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 96/327 (29%), Positives = 149/327 (45%), Gaps = 40/327 (12%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           L +R  I  ++R++F+   ++E+++  L   P  ETHI A +T+           +L +S
Sbjct: 13  LRRRAEIIKAIRDFFLHRDYLEVETPLLTAVPIPETHIDAIATDRG---------FLVSS 63

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   K LLAAG ++IF   H++R  E G  H  EF+MLE+YRA   Y +L  +   ++ 
Sbjct: 64  PEIYMKPLLAAGYDRIFQICHSFRKNEIGTHHLEEFSMLEYYRAGFDYLELAGETEELVL 123

Query: 142 CAAEVANQKIF-SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
             A         ++QN   +     E +TV EAF +  + D   + D P++ D  L    
Sbjct: 124 HIAGKLGTSGVLNYQNRQIDLSGPWERLTVREAFIKACDWDPLASPD-PERFDLELATSV 182

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A   G+                                  +PA  ++L+ +   +P   +
Sbjct: 183 A---GLSYDKPLVL------------------------YDFPADMASLSRLKSGNPAVAE 215

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           R EL+   +E+ N   EL D  EQR RF  E+   K        + E FL  L  +P+S+
Sbjct: 216 RTELFIGGLEVANIFSELTDVEEQRRRFIAELSADKS--KPQAELPEAFLEALRYLPESA 273

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPF 347
           G A+G DRLVML   A +I EV + P 
Sbjct: 274 GGALGVDRLVMLFCDAADIREVNFFPI 300


>gi|194432221|ref|ZP_03064509.1| lysyl-tRNA synthetase, heat inducible [Shigella dysenteriae 1012]
 gi|194419424|gb|EDX35505.1| lysyl-tRNA synthetase, heat inducible [Shigella dysenteriae 1012]
          Length = 258

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 8/208 (3%)

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
           V      ++     +     E +T+ EA  +Y         D  D  +       A+  G
Sbjct: 58  VLGTTKVTYGEHVFDFGKPFEKLTMREAIKKY-----RPETDMADLDNFDAAKALAESIG 112

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           I V        I + I  E  E +  +   T +  YPA  S LA     +P  T RFE +
Sbjct: 113 ITVEKSWGLGRIVTEIFDEVAEAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFF 170

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
               E+ N   EL D  +Q  RF++++  K    +E    DED++  L   +P ++G+ +
Sbjct: 171 IGGREIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGI 230

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           G DR++ML T ++ I +VI  P  +  +
Sbjct: 231 GIDRMIMLFTNSHTIRDVILFPAMRPQK 258


>gi|92114648|ref|YP_574576.1| tRNA synthetase, class II (D, K and N) [Chromohalobacter salexigens
           DSM 3043]
 gi|91797738|gb|ABE59877.1| tRNA synthetase, class II (D, K and N) [Chromohalobacter salexigens
           DSM 3043]
          Length = 324

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 91/330 (27%), Positives = 145/330 (43%), Gaps = 26/330 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L +R  + + +R +F E   +E+++  L +    + H+ + +          + L+LQ
Sbjct: 12  ETLRERARLLARVRAFFAERDVLEVETPVLGHGGSTDAHLDSLALTATTPQGRER-LWLQ 70

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF  K+LLAAG   +F  A ++R+GE G  H  EFTMLEWYR   + ++L+ +   +
Sbjct: 71  TSPEFHMKRLLAAGSGPVFQLARSFRDGEVGRRHNLEFTMLEWYRPGVTLDELIAEGDAL 130

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           IR         +   +                                +P       L  
Sbjct: 131 IRHVLPGDPGPLRRRRYRELFR---------------------EALDLDPFTAPLEALRA 169

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
           +A+  G     D         ++   IEP LG     ++  YPA ++ALA  +       
Sbjct: 170 RAETIGGLSMRDADRDGCLDLLMSLAIEPQLGQGGIDVVVDYPASQAALARKHRDPEDGV 229

Query: 260 K---RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
           +   RFE+Y   +EL N  DEL D  EQ  RFE + ++++ +      ID   LA L   
Sbjct: 230 EVAARFEIYLGGLELANGYDELTDAAEQAARFETDNRQRQALGKPHVDIDRHLLAALTAG 289

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           MP  SG+A+G DRL+ L  G  ++ EV+  
Sbjct: 290 MPSGSGVALGMDRLIQLALGKESVAEVMAF 319


>gi|54293590|ref|YP_126005.1| hypothetical protein lpl0642 [Legionella pneumophila str. Lens]
 gi|53753422|emb|CAH14875.1| hypothetical protein lpl0642 [Legionella pneumophila str. Lens]
          Length = 317

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 85/343 (24%), Positives = 141/343 (41%), Gaps = 33/343 (9%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L  R  +   +R++F E Q++E+++  +      + ++          
Sbjct: 6   WLPSASI---QLLRARAELIGKIRQFFTERQYLEVETPVMARHGVTDVYLSNIKAIFR-- 60

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
               +  YLQTSPE+  K+LLAAG   IF  A  +R+ E G  H PEFT+LEWY+ + ++
Sbjct: 61  ---GETCYLQTSPEYHMKRLLAAGSGPIFQLARVFRDDELGRWHNPEFTLLEWYQLNINH 117

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             LM +   +++                           T  +AF     ID  +T    
Sbjct: 118 HVLMDEVDLLLQIIL----------------KSQPMIRKTYQQAFEEACGIDPFSTSIEQ 161

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESAL 248
                    L+    G+    +         ++   +EP     +    +  +PA ++AL
Sbjct: 162 FTKILAQHGLE----GVLSPDEQDRDQYLFLLMSHVVEPFLAEESTPVAVYHFPASQAAL 217

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A I        +RFE+Y   +EL N   EL D   Q+ RF  + Q +K+        D  
Sbjct: 218 AQIQE---GLAERFEVYYQGVELANGFHELTDVEAQKKRFMLDQQHRKQKGLTAMEADAY 274

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L  L   +P  SG+A+G DRL+ L     +I +++   FS+S
Sbjct: 275 LLEALEHGLPPCSGVALGVDRLLALALKQPSIEKILSFDFSRS 317


>gi|53804592|ref|YP_113781.1| hypothetical protein MCA1319 [Methylococcus capsulatus str. Bath]
 gi|53758353|gb|AAU92644.1| conserved hypothetical protein TIGR00462 [Methylococcus capsulatus
           str. Bath]
          Length = 329

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 92/335 (27%), Positives = 159/335 (47%), Gaps = 25/335 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L +R  +   +R +F E + +E+++  L +    + H+  FS  +         L+LQ
Sbjct: 16  AMLRRRAELLRKIRRFFAEREVLEVETPLLSHGTVTDPHLSVFS--VGGGSDGSSRLFLQ 73

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF+ K+LLAAG   I+    A+R  E G  H PEFT+LEWYR     ++L+++   +
Sbjct: 74  TSPEFAMKRLLAAGSGSIYQICKAFRRDESGRFHNPEFTLLEWYRVGFGLDELIEETDAL 133

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++  +E            N  P +  E+++  E+F R+A ID       P          
Sbjct: 134 LQVLSE------------NIRPLAPSEHLSYRESFLRHAGID-------PLDAGFADFAG 174

Query: 200 QAQQAGIRVAHDDTWSD---IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
            A   G++ A     +D       +    ++P+LG    T +  +PA   +LA   P D 
Sbjct: 175 CAASHGLQEAEAICGTDRSIWLDLLFSHLVQPHLGRGRFTFVRDFPAILPSLARFKPDDE 234

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
           R  +R E++   +EL N   EL DP+EQ +RF++++  +          D   L  L   
Sbjct: 235 RLVERVEVFLDGLELGNGFFELSDPLEQEYRFDRDIAARIDAGLPVPEKDRRLLDALKAG 294

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +P  +GIA+G DRL++ +   + I + +  P +++
Sbjct: 295 LPDCAGIALGIDRLLLGLHRLDAIADTLAFPLAKA 329


>gi|114319846|ref|YP_741529.1| tRNA synthetase, class II (D, K and N) [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226240|gb|ABI56039.1| tRNA synthetase, class II (D, K and N) [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 314

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 96/317 (30%), Positives = 150/317 (47%), Gaps = 29/317 (9%)

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +F     +E+++  +  +P  + ++ + +           P +LQTSPE++ K+LLAAG 
Sbjct: 26  FFDRRGLLEVETPLMATAPAMDPNLDSLAV----SRPDGCPAWLQTSPEYAMKRLLAAGS 81

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
             I+    A+R  E+G LH PEFT+LEWYR    +  LM++   +               
Sbjct: 82  GDIWQLTRAFRGSERGRLHNPEFTLLEWYRVGWDHHALMQEVAEL--------------- 126

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
                      E+ T  +AF  +A +D       P Q    +L  +    G+  A  +  
Sbjct: 127 -AAELAGERPVEHWTYRDAFQHFAGLD-------PFQAPLDVLRARGGDKGLTAALGEDR 178

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
                 IL  ++ P LG    + L  +PA ++ALA + P DP   +RFEL+   +E+ N 
Sbjct: 179 DAWLDLILSREVAPRLGRGRLSFLTDFPASQAALARLRPGDPPVAERFELFMEGMEIANG 238

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLV 333
             EL DP EQR RF  E Q +     E  P+D+  LA L   +P  +G+A+G DRLVM+ 
Sbjct: 239 YHELADPAEQRRRFRAEQQARDARG-ERLPVDQRLLAALEAGLPPCAGVALGVDRLVMVA 297

Query: 334 TGANNINEVIWTPFSQS 350
            GA  I+ V   P  ++
Sbjct: 298 LGAECIDAVWAFPDERA 314


>gi|323346903|gb|EGA81182.1| Msk1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323352574|gb|EGA85073.1| Msk1p [Saccharomyces cerevisiae VL3]
          Length = 537

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 134/348 (38%), Gaps = 27/348 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             LL R  I   LR++  +  F+E+++  L          + F T     DH+     L+
Sbjct: 186 QTLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAM-AKPFITSSKDFDHLE----LR 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+ +G +K++     +RN      H  EF+ LE+Y  + S + ++    ++
Sbjct: 241 IAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHNAEFSTLEFYETYMSMDDIVXRTEDL 300

Query: 140 IRCAAE-----------VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID---LGTT 185
            +                  +              +   +       +   ID    G  
Sbjct: 301 FKFLITNLQKFFQDTRLPVPKTFSELHLALSENNWKFRKVEFLPTLNKELGIDLMNSGLD 360

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIEKIEP-NLGINCCTILDRYP 242
           ++ P +  + L    A++      +    S   I +++    +E  +      T++   P
Sbjct: 361 INKPSELLKALPKDIAKKYFPSADNTGQLSSLQILNKLSDVFLEQRHCQSTLPTVIYHQP 420

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A  S LA   P + + TKRFE++    E  NA +E   P  Q  +F ++ Q  +   N+T
Sbjct: 421 AILSPLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKT 480

Query: 303 Y----PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 ID  ++  +   MP   G  +G DRL ML      I EV+  
Sbjct: 481 ETLSPVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 528


>gi|254516089|ref|ZP_05128149.1| lysyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219675811|gb|EED32177.1| lysyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 318

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 92/341 (26%), Positives = 143/341 (41%), Gaps = 30/341 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W        R  L  R  I + +R++F + Q +E+D+  L      +  I      L   
Sbjct: 4   WRPGA---TRAALQARGEIFARIRQFFADRQVLEVDTPVLSRFGVTDPAIEPLR--LAPS 58

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
                 ++LQ+SPEF+ K+LLAAG   I+    A+R+GE G  H PEFT+LEWYR     
Sbjct: 59  QAQPSSMFLQSSPEFAMKRLLAAGSGPIYQLGKAFRDGEIGARHNPEFTLLEWYRPGFGL 118

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           EQL+++   ++                  C      + ++    F     +D  T     
Sbjct: 119 EQLIQEVGELV----------------CECLGRDAWDVMSYQALFQEILGVDPWTVT--- 159

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                  L   A Q       +  +      ++   +EP L       +  YP  ++ALA
Sbjct: 160 ----ASQLQEVAAQHLDVGELELDYDGWLDLLMSHVLEPVLASRGLQFVCDYPPSQAALA 215

Query: 250 NIYPADPR-FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                D R   +RFELY   IEL N   ELLD  E   R   +   +K    E   +D  
Sbjct: 216 RCVDRDGRVVAQRFELYVDGIELANGYAELLDAKELIARAASDNTLRKLSGQEPRALDSR 275

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +A +   +P  SG+A+G DRL+M   GA+ ++ V+   ++
Sbjct: 276 LVAAMQEGLPDCSGVALGVDRLLMAKLGADRLSAVMPFDWT 316


>gi|323335817|gb|EGA77096.1| Msk1p [Saccharomyces cerevisiae Vin13]
          Length = 517

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 134/348 (38%), Gaps = 27/348 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             LL R  I   LR++  +  F+E+++  L          + F T     DH+     L+
Sbjct: 166 QTLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAM-AKPFITSSKDFDHLE----LR 220

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+ +G +K++     +RN      H  EF+ LE+Y  + S + ++    ++
Sbjct: 221 IAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHNAEFSTLEFYETYMSMDDIVTRTEDL 280

Query: 140 IRCAAE-----------VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID---LGTT 185
            +                  +              +   +       +   ID    G  
Sbjct: 281 FKFLITNLQKFFQDTRLPVPKTFSELHLALSENNWKFRKVEFLPTLNKELGIDLMNSGLD 340

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIEKIEP-NLGINCCTILDRYP 242
           ++ P +  + L    A++      +    S   I +++    +E  +      T++   P
Sbjct: 341 INKPSELLKALPKDIAKKYFPSADNTGQLSSLQILNKLSDVFLEQRHCQSTLPTVIYHQP 400

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A  S LA   P + + TKRFE++    E  NA +E   P  Q  +F ++ Q  +   N+T
Sbjct: 401 AILSPLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKT 460

Query: 303 Y----PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 ID  ++  +   MP   G  +G DRL ML      I EV+  
Sbjct: 461 ETLSPVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 508


>gi|323331966|gb|EGA73378.1| Msk1p [Saccharomyces cerevisiae AWRI796]
          Length = 537

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 134/348 (38%), Gaps = 27/348 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             LL R  I   LR++  +  F+E+++  L          + F T     DH+     L+
Sbjct: 186 QTLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAM-AKPFITSSKDFDHLE----LR 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+ +G +K++     +RN      H  EF+ LE+Y  + S + ++    ++
Sbjct: 241 IAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHNAEFSTLEFYETYMSMDDIVTRTEDL 300

Query: 140 IRCAAE-----------VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID---LGTT 185
            +                  +              +   +       +   ID    G  
Sbjct: 301 FKFLITNLQKFFQDTRLPVPKTFSELHLALSENNWKFRKVEFLPTLNKELGIDLMNSGLD 360

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIEKIEP-NLGINCCTILDRYP 242
           ++ P +  + L    A++      +    S   I +++    +E  +      T++   P
Sbjct: 361 INKPSELLKALPKDIAKKYFPSADNTGQLSSLQILNKLSDVFLEQRHCQSTLPTVIYHQP 420

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A  S LA   P + + TKRFE++    E  NA +E   P  Q  +F ++ Q  +   N+T
Sbjct: 421 AILSPLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKT 480

Query: 303 Y----PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 ID  ++  +   MP   G  +G DRL ML      I EV+  
Sbjct: 481 ETLSPVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 528


>gi|6324256|ref|NP_014326.1| Msk1p [Saccharomyces cerevisiae S288c]
 gi|1351160|sp|P32048|SYKM_YEAST RecName: Full=Lysyl-tRNA synthetase, mitochondrial; AltName:
           Full=Lysine--tRNA ligase; Short=LysRS; Flags: Precursor
 gi|791113|emb|CAA60187.1| lysine--tRNA ligase [Saccharomyces cerevisiae]
 gi|1301959|emb|CAA95947.1| MSK1 [Saccharomyces cerevisiae]
 gi|285814578|tpg|DAA10472.1| TPA: Msk1p [Saccharomyces cerevisiae S288c]
          Length = 576

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 134/348 (38%), Gaps = 27/348 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             LL R  I   LR++  +  F+E+++  L          + F T     DH+     L+
Sbjct: 225 QTLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAM-AKPFITSSKDFDHLE----LR 279

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+ +G +K++     +RN      H  EF+ LE+Y  + S + ++    ++
Sbjct: 280 IAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHNAEFSTLEFYETYMSMDDIVTRTEDL 339

Query: 140 IRCAAE-----------VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID---LGTT 185
            +                  +              +   +       +   ID    G  
Sbjct: 340 FKFLITNLQKFFQDTRLPVPKTFSELHLALSENNWKFRKVEFLPTLNKELGIDLMNSGLD 399

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIEKIEP-NLGINCCTILDRYP 242
           ++ P +  + L    A++      +    S   I +++    +E  +      T++   P
Sbjct: 400 INKPSELLKALPKDIAKKYFPSADNTGQLSSLQILNKLSDVFLEQRHCQSTLPTVIYHQP 459

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A  S LA   P + + TKRFE++    E  NA +E   P  Q  +F ++ Q  +   N+T
Sbjct: 460 AILSPLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKT 519

Query: 303 Y----PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 ID  ++  +   MP   G  +G DRL ML      I EV+  
Sbjct: 520 ETLSPVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 567


>gi|190409062|gb|EDV12327.1| lysine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|207341689|gb|EDZ69675.1| YNL073Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 576

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 134/348 (38%), Gaps = 27/348 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             LL R  I   LR++  +  F+E+++  L          + F T     DH+     L+
Sbjct: 225 QTLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAM-AKPFITSSKDFDHLE----LR 279

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+ +G +K++     +RN      H  EF+ LE+Y  + S + ++    ++
Sbjct: 280 IAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHNAEFSTLEFYETYMSMDDIVTRTEDL 339

Query: 140 IRCAAE-----------VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID---LGTT 185
            +                  +              +   +       +   ID    G  
Sbjct: 340 FKFLITNLQKFFQDTRLPVPKTFSELHLALSENNWKFRKVEFLPTLNKELGIDLMNSGLD 399

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIEKIEP-NLGINCCTILDRYP 242
           ++ P +  + L    A++      +    S   I +++    +E  +      T++   P
Sbjct: 400 INKPSELLKALPKDIAKKYFPSADNTGQLSSLQILNKLSDVFLEQRHCQSTLPTVIYHQP 459

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A  S LA   P + + TKRFE++    E  NA +E   P  Q  +F ++ Q  +   N+T
Sbjct: 460 AILSPLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKT 519

Query: 303 Y----PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 ID  ++  +   MP   G  +G DRL ML      I EV+  
Sbjct: 520 ETLSPVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 567


>gi|189424973|ref|YP_001952150.1| tRNA synthetase class II (D K and N) [Geobacter lovleyi SZ]
 gi|189421232|gb|ACD95630.1| tRNA synthetase class II (D K and N) [Geobacter lovleyi SZ]
          Length = 302

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 108/326 (33%), Positives = 159/326 (48%), Gaps = 37/326 (11%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           L  R  +  ++R +F E  F+E+++     +   E  I       +          LQTS
Sbjct: 7   LYIRAQVLQTIRRFFTERGFLEVETPFRIPANAPEEFIDP--VPALAS------WQLQTS 58

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   K+LL  G +KIF     WR  E+G  H  EFTMLEWYR++  Y  LM+DC+ ++R
Sbjct: 59  PEICMKRLLCRGYDKIFQICRCWRADERGSRHLTEFTMLEWYRSNADYRDLMQDCVGLLR 118

Query: 142 CAAEVAN-QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
             A+  +    F   ++  +P     + +V EAF R+A  D   +  N            
Sbjct: 119 QVADTCSEGACFKRNDLKIDPNQTWLHFSVQEAFLRFAKDDALVSAQN------------ 166

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANIYPADPRFT 259
                           +F  +L ++IEP         IL  YPA  +ALA +    P F 
Sbjct: 167 ---------------GLFEELLTDRIEPALEKFEVPVILQDYPAQLAALARLKTVAPDFA 211

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQS 319
           +RFELY   +EL N   EL DP EQR RFE+  + ++++     P+ E FLA L+ MP +
Sbjct: 212 ERFELYVGGLELANGFSELTDPFEQRARFEEANRIRQQMGKSELPLPEPFLAELSAMPPA 271

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWT 345
           +GIA+G DRLVML  GA+ I++V+  
Sbjct: 272 AGIALGVDRLVMLTVGADCIDQVVAF 297


>gi|213021330|ref|ZP_03335777.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 247

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 9/254 (3%)

Query: 88  KLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-V 146
           +L+  G E++F     +RN      H PEFTM+E Y A+  Y+ L++   ++ R  A+ V
Sbjct: 1   RLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDV 60

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
                  + +   +     E +T+ EA  +Y         D  D  +       A+  GI
Sbjct: 61  LGTTQVPYGDEVFDFGKPFEKLTMHEAIKKY-----RPETDMADLDNFDSAKAIAESIGI 115

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
            V        I + I  E  E +  +   T +  YPA  S LA     +P  T RFE + 
Sbjct: 116 HVEKSWGLGRIVTEIFDEVAEAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFI 173

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMG 325
              E+ N   EL D  +Q  RF  ++  K    +E    DED++  L   +P ++G+ +G
Sbjct: 174 GGREIGNGFSELNDAEDQAQRFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIG 233

Query: 326 FDRLVMLVTGANNI 339
            DR+VML T ++ I
Sbjct: 234 IDRMVMLFTNSHTI 247


>gi|296112635|ref|YP_003626573.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920329|gb|ADG60680.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 323

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 94/324 (29%), Positives = 141/324 (43%), Gaps = 23/324 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
            KR  +   +R +F     +E+ +  L  +   + +I++           +   YL TSP
Sbjct: 15  KKRAQMLQHIRAFFEARNIMEVTTPILSQAANTDVYIQSVQATFQGATG-QTKGYLHTSP 73

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
           EF+ K+LLAA +  I+     +R+ E+G  H  EFTMLEWYR + S    +    + +  
Sbjct: 74  EFAMKRLLAAYQTPIYQICQVFRDNEKGHRHNIEFTMLEWYRPNFS----LDALADELSE 129

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
              V  QK                 I+ A+AF  Y  I     ++ PD     +L   A 
Sbjct: 130 LLSVVYQKPIHLTQ-----------ISYAQAFVHYLGIHPFDDMNTPD-----ILRQCAV 173

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRFTK 260
              I +   D        +    IEP LG+   T++  YP   +A     +        +
Sbjct: 174 AHNIHLDMGDDKQGWLDLLFSHLIEPKLGLQNPTLVINYPKLTAALAKTAVDADGYEIAR 233

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   IE+ NA DEL +  E   RFE++  E+ +      PID   LA    +P   
Sbjct: 234 RFELYIHGIEIANAYDELANSQELLKRFEQDNHERHRQGLPIMPIDYRLLAACDHLPDCC 293

Query: 321 GIAMGFDRLVMLVTGANNINEVIW 344
           GIA+G DRL M++ G  NIN+ I 
Sbjct: 294 GIALGIDRLFMVLQGQLNINQAIA 317


>gi|326569794|gb|EGE19844.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 324

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 94/324 (29%), Positives = 141/324 (43%), Gaps = 23/324 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
            KR  +   +R +F     +E+ +  L  +   + +I++            K  YL TSP
Sbjct: 16  KKRAQMLQHIRAFFEARNIMEVTTPILSQAANTDVYIQSVQATFQGATGQAK-GYLHTSP 74

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
           EF+ K+LLAA +  I+     +R+ E+G  H  EFTMLEWYR + S    +    + +  
Sbjct: 75  EFAMKRLLAAYQTPIYQICQVFRDNEKGHRHNIEFTMLEWYRPNFS----LDALADELSE 130

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
              V  QK                 I+ A+AF  Y  I     +  PD     +L   A 
Sbjct: 131 LLSVVYQKPIHLSQ-----------ISYAQAFVHYLGIHPFDDMSTPD-----ILRQCAV 174

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRFTK 260
              I +   D        +    IEP LG+   T++  YP   +A     +        +
Sbjct: 175 AHNIHLDMGDDKQGWLDLLFSHLIEPKLGLQNPTLVINYPKLTAALAKTAVDADGYEIAR 234

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   +E+ NA DEL +  E   RFE++  E+++      PID   LA    +P   
Sbjct: 235 RFELYIHGVEIANAYDELANSQELLKRFEQDNHERRRQGLPIMPIDHRLLAACDHLPDCC 294

Query: 321 GIAMGFDRLVMLVTGANNINEVIW 344
           GIA+G DRL M++ G  NIN+ I 
Sbjct: 295 GIALGIDRLFMVLQGQLNINQAIA 318


>gi|259149288|emb|CAY82530.1| Msk1p [Saccharomyces cerevisiae EC1118]
          Length = 576

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 134/348 (38%), Gaps = 27/348 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             LL R  I   LR++  +  F+E+++  L          + F T     DH+     L+
Sbjct: 225 QTLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAM-AKPFITSSKDFDHLE----LR 279

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+ +G +K++     +RN      H  EF+ LE+Y  + S + ++    ++
Sbjct: 280 IAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHNAEFSTLEFYETYMSMDDIVARTEDL 339

Query: 140 IRCAAE-----------VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID---LGTT 185
            +                  +              +   +       +   ID    G  
Sbjct: 340 FKFLITNLQKFFQDTRLPVPKTFSELHLALSENNWKFRKVEFLPTLNKELGIDLMNSGLD 399

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIEKIEP-NLGINCCTILDRYP 242
           ++ P +  + L    A++      +    S   I +++    +E  +      T++   P
Sbjct: 400 INKPSELLKALPKDIAKKYFPSADNTGQLSSLQILNKLSDVFLEQRHCQSTLPTVIYHQP 459

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A  S LA   P + + TKRFE++    E  NA +E   P  Q  +F ++ Q  +   N+T
Sbjct: 460 AILSPLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKT 519

Query: 303 Y----PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 ID  ++  +   MP   G  +G DRL ML      I EV+  
Sbjct: 520 ETLSPVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 567


>gi|151944461|gb|EDN62739.1| mitochondrial lysyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
          Length = 576

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 133/348 (38%), Gaps = 27/348 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             LL R  I   LR++  +  F+E+++  L          + F T     DH+     L+
Sbjct: 225 QTLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAM-AKPFITSSKDFDHLE----LR 279

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+ +G +K++     +RN      H  EF+ LE+Y  + S + ++    ++
Sbjct: 280 IAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHNAEFSTLEFYETYMSMDDIVVRTEDL 339

Query: 140 IRCAAE-----------VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID---LGTT 185
            +                  +              +   +       +   ID    G  
Sbjct: 340 FKFLITNLQKFFQDTRLPVPKTFSELHLALSENNWKFRKVEFLPTLNKELGIDLMNSGLD 399

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIEKIEP-NLGINCCTILDRYP 242
           +  P +  + L    A++      +    S   I +++    +E  +      T++   P
Sbjct: 400 ISKPSELLKALPKDIAEKYFPSADNTGQLSSLQILNKLSDVFLEQRHCQSTLPTVIYHQP 459

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A  S LA   P + + TKRFE++    E  NA +E   P  Q  +F ++ Q  +   N+T
Sbjct: 460 AILSPLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKT 519

Query: 303 Y----PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 ID  ++  +   MP   G  +G DRL ML      I EV+  
Sbjct: 520 ETLSPVIDYQYIETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 567


>gi|326563869|gb|EGE14120.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
 gi|326566540|gb|EGE16686.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 324

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 93/324 (28%), Positives = 140/324 (43%), Gaps = 23/324 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
            KR  +   +R +F     +E+ +  L  +   + +I++           +   YL TSP
Sbjct: 16  KKRAQMLQHIRAFFEARNIMEVTTPILSQAANTDVYIQSVQATFQGATG-QTKGYLHTSP 74

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
           EF+ K+LLAA +  I+     +R+ E+G  H  EFTMLEWYR + S    +    + +  
Sbjct: 75  EFAMKRLLAAYQTPIYQICQVFRDHEKGHRHNIEFTMLEWYRPNFS----LDALADELSE 130

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
              V  QK                 I+ A+AF  Y  I     +  PD     +L   A 
Sbjct: 131 LLSVVYQKPIHLTQ-----------ISYAQAFVHYLGIHPFDDMSTPD-----ILRQCAV 174

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRFTK 260
              I +   D        +    IEP LG+   T++  YP   +A     +        +
Sbjct: 175 AHNIHLDMGDDKQGWLDLLFSHLIEPKLGLQNPTLVINYPKLTAALAKTAVDADGYEIAR 234

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   +E+ NA DEL +  E   RFE++  E+ +      PID   LA    +P   
Sbjct: 235 RFELYIHGVEIANAYDELANSQELLKRFEQDNHERHRQGLPIMPIDYRLLAACDHLPDCC 294

Query: 321 GIAMGFDRLVMLVTGANNINEVIW 344
           GIA+G DRL M++ G  NIN+ I 
Sbjct: 295 GIALGIDRLFMVLQGQLNINQAIA 318


>gi|326566878|gb|EGE17017.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326575120|gb|EGE25048.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis CO72]
 gi|326576794|gb|EGE26701.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 324

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 143/324 (44%), Gaps = 23/324 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
            KR  +   +R +F     +E+ +  L  +   + +I++           +   YL TSP
Sbjct: 16  KKRAQMLQHIRAFFEARNIMEVTTPILSQAANTDVYIQSVQATFQGATG-QTKGYLHTSP 74

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
           EF+ K+LLAA +  I+     +R+ E+G  H  EFTMLEWYR + S    +    + +  
Sbjct: 75  EFAMKRLLAAYQTPIYQICQVFRDHEKGHRHNIEFTMLEWYRPNFS----LDALADELSE 130

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
              V  QK                 I+ A+AF  Y  I     +  PD     +L   A 
Sbjct: 131 LLSVVYQKPIHLTQ-----------ISYAQAFVHYLGIHPFDDMSTPD-----ILRQCAV 174

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF--TK 260
              I +   D        +    IEP LG+   T++  YP   +ALA        +   +
Sbjct: 175 AHNIHLDMGDDKQGWLDLLFSHLIEPKLGLQNPTLVINYPKLTAALAKTAADADGYEIAR 234

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   +E+ NA DEL +  E   RFE++  E+++      PID   LA    +P   
Sbjct: 235 RFELYIHGVEIANAYDELANSQELLKRFEQDNHERRRQGLPIMPIDHRLLAACDHLPDCC 294

Query: 321 GIAMGFDRLVMLVTGANNINEVIW 344
           GIA+G DRL M++ G  NIN+ I 
Sbjct: 295 GIALGIDRLFMVLQGQLNINQAIA 318


>gi|307609403|emb|CBW98892.1| hypothetical protein LPW_06791 [Legionella pneumophila 130b]
          Length = 317

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 84/343 (24%), Positives = 140/343 (40%), Gaps = 33/343 (9%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L  R  +   +R++F E Q++E+++  +      + ++          
Sbjct: 6   WLPSASI---QLLRARAELIGKIRQFFTERQYLEVETPVMARHGVTDVYLSNIKAIFR-- 60

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
               +  YLQTSPE+  K+LLAAG   IF  A  +R+ E G  H PEFT+LEWY+   ++
Sbjct: 61  ---GETCYLQTSPEYHMKRLLAAGSGPIFQLARVFRDDELGRWHNPEFTLLEWYQLDINH 117

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             LM +   +++                           T  +AF     ID  +T    
Sbjct: 118 HVLMDEVDLLLQIIL----------------KSQPMIRKTYQQAFEEACGIDPFSTSIEQ 161

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESAL 248
                    L+    G+    +         ++   +EP     +    +  +PA ++AL
Sbjct: 162 FTRILAQHGLE----GVLSPDEQDRDQYLFLLMSHVVEPFLAEESTPVAVYHFPASQAAL 217

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
           A +        +RFE+Y   +EL N   EL D   Q+ RF  + Q +K+        D  
Sbjct: 218 AQVQE---GLAERFEVYYQGVELANGFHELTDVEAQKKRFMLDQQHRKQKGLTAMEADSY 274

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L  L   +P  SG+A+G DRL+ L     +I +++   FS+S
Sbjct: 275 LLEALEHGLPPCSGVALGVDRLLALALKQPSIEKILSFDFSRS 317


>gi|289766705|ref|ZP_06526083.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718260|gb|EFD82272.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 229

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 11/236 (4%)

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           M+E Y+AH  +  +M     +I    E  N       +         + + + +      
Sbjct: 1   MIELYQAHADFNDMMDIAEGMISTICEKINGTTDIVYDGVQLSLKNFKRVHMVDMIKDVT 60

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTI 237
            +D    +              A++  + +A        I +    +K E    +   T 
Sbjct: 61  GVDFWKEMT------FEEAKQLAKEHHVEIAPHMNSVGHIINEFFEQKCEEK--VIQPTF 112

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  +P   S LA     +P FT RFEL+    E  NA  EL DP +QR RFE +++E  +
Sbjct: 113 VYGHPVEISPLAKRNEDNPNFTDRFELFINKREYANAFTELNDPADQRGRFEAQVEEALR 172

Query: 298 IYNETYP-IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
              E  P IDED++  L   MP + G+ +G DRLVML+TG+ +I +VI  P  +  
Sbjct: 173 GNEEATPVIDEDYVEALEYGMPPTGGMGIGIDRLVMLLTGSPSIRDVILFPQMKPR 228


>gi|326571294|gb|EGE21316.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 324

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 92/324 (28%), Positives = 139/324 (42%), Gaps = 23/324 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
            KR  +   +R +F     +E+ +  L  +   + +I++           +   YL TSP
Sbjct: 16  KKRAQMLQHIRAFFEARNIMEVTTPILSQAANTDVYIQSVQATFQGATG-QTKGYLHTSP 74

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
           EF+ K+LLAA +  I+     +R+ E+G  H  EFTMLEWYR + S    +    + +  
Sbjct: 75  EFAMKRLLAAYQTPIYQICQVFRDNEKGHRHNIEFTMLEWYRPNFS----LDALADELSE 130

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
              V  QK                 I+ A+AF  Y  I         D    ++L   A 
Sbjct: 131 LLSVVYQKPIHLTQ-----------ISYAQAFVHYLGI-----HPFDDMSTPNILRQCAV 174

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRFTK 260
              I +   D        +    IEP LG+   T++  YP   +A     +        +
Sbjct: 175 AHNIHLDMGDDKQGWLDLLFSHLIEPKLGLQNPTLVINYPKLTAALAKTAVDADGYEIAR 234

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   +E+ NA DEL +  E   RFE++  E+ +      PID   LA    +P   
Sbjct: 235 RFELYINGVEIANAYDELANSQELLKRFEQDNHERHRQGLPIMPIDYRLLAACDHLPDCC 294

Query: 321 GIAMGFDRLVMLVTGANNINEVIW 344
           GIA+G DRL M++ G  NIN+ I 
Sbjct: 295 GIALGIDRLFMVLQGQLNINQAIA 318


>gi|256274455|gb|EEU09357.1| Msk1p [Saccharomyces cerevisiae JAY291]
          Length = 576

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 134/348 (38%), Gaps = 27/348 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             LL R  I   LR++  +  F+E+++  L          + F T     DH+     L+
Sbjct: 225 QTLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAM-AKPFITSSKDFDHLE----LR 279

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+ +G +K++     +RN      H  EF+ LE+Y  + S + ++    ++
Sbjct: 280 IAPELWLKRLIISGLQKVYEIGKVFRNEGIDSTHNAEFSTLEFYETYMSMDDIVARTEDL 339

Query: 140 IRCAAE-----------VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID---LGTT 185
            +                  +              +   +       +   ID    G  
Sbjct: 340 FKFLITNLQKFFQDTRLPVPKTFSELHLALSENNWKFRKVEFLPTLNKELGIDLMNSGLD 399

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIEKIEP-NLGINCCTILDRYP 242
           ++ P +  + L    A++      +    S   I +++    +E  +      T++   P
Sbjct: 400 INKPSELLKALPKDIAEKYFPSADNTGQLSSLQILNKLSDVFLEQRHCQSTLPTVIYHQP 459

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A  S LA   P + + TKRFE++    E  NA +E   P  Q  +F ++ Q  +   N+T
Sbjct: 460 AILSPLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKT 519

Query: 303 Y----PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 ID  ++  +   MP   G  +G DRL ML      I EV+  
Sbjct: 520 ETLSPVIDYQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLPF 567


>gi|326560895|gb|EGE11260.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 324

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 92/324 (28%), Positives = 140/324 (43%), Gaps = 23/324 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
            KR  +   +R +F     +E+ +  L  +   + +I++           +   YL TSP
Sbjct: 16  KKRAQMLQHIRAFFEARNIMEVTTPILSQAANTDVYIQSVQATFQGATG-QTKGYLHTSP 74

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
           EF+ K+LLAA +  I+     +R+ E+G  H  EFTMLEWYR + S    +    + +  
Sbjct: 75  EFAMKRLLAAYQTPIYQICQVFRDHEKGHRHNIEFTMLEWYRPNFS----LDALADELSE 130

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
              V  QK                 I+ A+AF  Y  I         D    ++L   A 
Sbjct: 131 LLSVVYQKPIHLTQ-----------ISYAQAFVHYLGI-----HPFDDMSTPNILRQCAV 174

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRFTK 260
              I +   D        +    IEP LG+   T++  YP   +A     +        +
Sbjct: 175 AHNIHLDMGDDKQGWLDLLFSHLIEPKLGLQNPTLVINYPKLTAALAKTAVDADGYEIAR 234

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   +E+ NA DEL +  E   RFE++  E+++      PID   LA    +P   
Sbjct: 235 RFELYIHGVEIANAYDELANSQELLKRFEQDNHERRRQGLPIMPIDHRLLAACDHLPDCC 294

Query: 321 GIAMGFDRLVMLVTGANNINEVIW 344
           GIA+G DRL M++ G  NIN+ I 
Sbjct: 295 GIALGIDRLFMVLQGQLNINQAIA 318


>gi|297171359|gb|ADI22363.1| lysyl-tRNA synthetase (class II) [uncultured nuHF2 cluster
           bacterium HF0500_02A10]
          Length = 236

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 11/239 (4%)

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPEY 167
               H PEFTMLE+Y+A   Y  LM     ++ + A          +Q    +     + 
Sbjct: 1   MDRFHNPEFTMLEFYQAFIDYRGLMDLTEKMLSQVALVATGSTDVIYQGQEIDFAPPYQR 60

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           + + +  +    +D+              L+  A++  I       W  +  ++  E ++
Sbjct: 61  VPMLDKLSEVMGLDVRG-------LSVAELHDHAEKLNIPGLDGAGWGKVVDKLFSELVQ 113

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P+  +   T +  +P   S LA  +   P  T+RFEL+    E+CNA  EL DPI+QR R
Sbjct: 114 PS--LVQPTFVMDHPKDISPLAKSHRDKPDLTERFELFIAGEEICNAFSELNDPIDQRER 171

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE +++ ++   +ET+P+DED++  L   MP + G+ MG DRL M++T   +I +VI  
Sbjct: 172 FENQIKLREAGDDETHPLDEDYIRALEYGMPPTGGLGMGIDRLTMILTDQVSIRDVILF 230


>gi|94500573|ref|ZP_01307104.1| lysyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94427363|gb|EAT12342.1| lysyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 311

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 101/344 (29%), Positives = 166/344 (48%), Gaps = 38/344 (11%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W  +      P L +R      LRE+F++   +E+++  L  +  ++ +++  S ++   
Sbjct: 3   WQPNASI---PALQERANFYRYLREFFLQRSVLEVETPMLSKAAVSDANLQPVSAQV--- 56

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
             +  P +L TSPE+  K+LLAAG   I+     +R+GEQG  H PEF+MLE+YR   + 
Sbjct: 57  --MNAPAFLHTSPEYPMKRLLAAGSGDIYQICKTFRDGEQGNRHNPEFSMLEYYRLGFNL 114

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E LM +   ++     +  ++ F                T A+A   YA++D     D+ 
Sbjct: 115 ETLMDEVAQLVGDYLAIQQRQNF----------------TYAQALDTYADLDPFNMSDDE 158

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
            +   +         G               I+   +EP L  N    +  YPA ++ALA
Sbjct: 159 LRARCNEFVGTDVDLGRDAC--------LDIIMSHVVEPQLPKNTLVFIYNYPASQAALA 210

Query: 250 NIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
             Y         KRFELY   +EL N  DEL+D  EQ+ RF+ E ++++   +E    DE
Sbjct: 211 KTYERFDGIQVAKRFELYVNGLELANGYDELVDVQEQKSRFDVEAKKRE---HEQRVDDE 267

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            FL  L + +P  SG+A+G DR++ML  G +NI++V+   FS++
Sbjct: 268 YFLQALASGLPDCSGVAIGLDRILMLKLGLSNISDVLSFDFSRA 311


>gi|326577529|gb|EGE27406.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 324

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 93/324 (28%), Positives = 141/324 (43%), Gaps = 23/324 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
            KR  +   +R +F     +E+ +  L  +   + +I++            K  YL TSP
Sbjct: 16  KKRAQMLQHIRAFFEARNIMEVTTPILSQAANTDVYIQSVQATFQGATGQAK-GYLHTSP 74

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
           EF+ K+LLAA +  I+     +R+ E+G  H  EFTMLEWYR + S    +    + +  
Sbjct: 75  EFAMKRLLAAYQTPIYQICQVFRDNEKGHRHNIEFTMLEWYRPNFS----LDALADELSE 130

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
              V  QK                 I+ A+AF  Y  I     ++ P     ++L   A 
Sbjct: 131 LLSVVYQKPIHLTQ-----------ISYAQAFVHYLGIHPFDDMNTP-----NILRQCAV 174

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRFTK 260
              I +   D        +    IEP LG+   T++  YP   +A     +        +
Sbjct: 175 AHNIHLDMGDDKQGWLDLLFSHLIEPKLGLQNPTLVINYPKLTAALAKTAVDADGYEIAR 234

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   +E+ NA DEL +  E   RFE++  E+ +      PID   LA    +P   
Sbjct: 235 RFELYIHGVEIANAYDELANSQELLKRFEQDNHERHRQGLPIMPIDYRLLAACDHLPDCC 294

Query: 321 GIAMGFDRLVMLVTGANNINEVIW 344
           GIA+G DRL M++ G  NIN+ I 
Sbjct: 295 GIALGIDRLFMVLQGQLNINQAIA 318


>gi|194366354|ref|YP_002028964.1| Lysine--tRNA ligase [Stenotrophomonas maltophilia R551-3]
 gi|194349158|gb|ACF52281.1| Lysine--tRNA ligase [Stenotrophomonas maltophilia R551-3]
          Length = 318

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 21/330 (6%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQT 80
           L +R  + + LR +F E   +E+++  L  +   E +I +F T+     D   +  +L+T
Sbjct: 9   LQQRAALNALLRRFFAERDVLEVETPILSVAGNTEPNIDSFHTDFTGHVDAGGRRRWLRT 68

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG    +     +RNGE G  H PEFTMLEWYR    + +L+++   ++
Sbjct: 69  SPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNPEFTMLEWYRVGWDHHRLVQETAELV 128

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
             A  +                +    ++  E F ++  +D       P   D   L   
Sbjct: 129 GLALALVG------------RSARLRVLSYRELFQQHVGVD-------PFGADEAALRAA 169

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
                I      T  D    ++   I+P+      T++  +PA ++ALA I P  P   +
Sbjct: 170 LGDVHID-PVGLTRDDWLDLLMTHHIQPHFDDAVMTVVHDWPASQAALARIRPGTPPLAE 228

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   +EL N   EL D  EQR RF++++Q + +       +DE  LA L  MP  +
Sbjct: 229 RFELYLGAVELANGYHELNDAQEQRVRFQRDLQRRHERGQVQPALDEALLAALPSMPACA 288

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           G+A+G DRL+M +     I +V+   F+++
Sbjct: 289 GVAVGIDRLLMAMNRTPRIADVLAYDFARA 318


>gi|302759579|ref|XP_002963212.1| hypothetical protein SELMODRAFT_79569 [Selaginella moellendorffii]
 gi|300168480|gb|EFJ35083.1| hypothetical protein SELMODRAFT_79569 [Selaginella moellendorffii]
          Length = 287

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 76/303 (25%), Positives = 122/303 (40%), Gaps = 22/303 (7%)

Query: 54  GNE--THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
           G       R   T     + + + L L+ + E   K +     E++      +RN     
Sbjct: 3   GGARGADARPSITH---HNSVERDLVLRIATELHLKWV---PVERVDELGRIFRNEGIST 56

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
            H PEFT +E Y+A+  Y  +M    ++I +CA  +       +Q               
Sbjct: 57  RHNPEFTSMEIYQAYADYNDMMALAEDLIAKCAEAILGNAKLLYQVCGLACSHWFRR--P 114

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            E+    +            + D  L  + A  A +         ++ + +    +E   
Sbjct: 115 LESTLVLSAAKSAALSALSPRKDESLQTVIANCATV--------GNVLNEVFEAVVEKT- 165

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
            +   T +  +P   S LA  + + P   + FELY C  EL NA  EL DPIEQ      
Sbjct: 166 -LIQPTFVTNHPVEVSPLAKAHRSFPGLVEGFELYICGRELANAFSELTDPIEQVRALVS 224

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
               + K  +    +DEDFL  L   MP ++G+ +G DRLVML+T + +I +VI  P  +
Sbjct: 225 PCHPQHKNDSYEVTLDEDFLTALEYGMPPTAGMGIGIDRLVMLLTDSPSIGDVIAFPVLK 284

Query: 350 SNQ 352
           S Q
Sbjct: 285 SQQ 287


>gi|326571602|gb|EGE21617.1| putative lysyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 324

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 93/324 (28%), Positives = 139/324 (42%), Gaps = 23/324 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
            KR  +   +R +F     +E+ +  L  +   + +I++            K  YL TSP
Sbjct: 16  KKRAQMLQHIRAFFEARNIMEVTTPILSQAANTDVYIQSVQATFQGATGQAK-GYLHTSP 74

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
           EF+ K+LLAA +  I+     +R+ E+G  H  EFTMLEWYR + S    +    + +  
Sbjct: 75  EFAMKRLLAAYQTPIYQICQVFRDHEKGHRHNIEFTMLEWYRPNFS----LDALADELSE 130

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
              V  QK                 I+ A+AF  Y  I         D    ++L   A 
Sbjct: 131 LLSVVYQKPIHLTQ-----------ISYAQAFVHYLGI-----HPFDDMSTPNILRQCAV 174

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRFTK 260
              I +   D        +    IEP LG+   T++  YP   +A     +        +
Sbjct: 175 AHNIHLDMGDDKQGWLDLLFSHLIEPKLGLQNPTLVINYPKLTAALAKTAVDADGYEIAR 234

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   +E+ NA DEL +  E   RFE++  E+ +      PID   LA    +P   
Sbjct: 235 RFELYIHGVEIANAYDELANSQELLKRFEQDNHERHRQGLPIMPIDHRLLAACDHLPDCC 294

Query: 321 GIAMGFDRLVMLVTGANNINEVIW 344
           GIA+G DRL M++ G  NIN+ I 
Sbjct: 295 GIALGIDRLFMVLQGQLNINQAIA 318


>gi|23011198|ref|ZP_00051631.1| COG2269: Truncated, possibly inactive, lysyl-tRNA synthetase (class
           II) [Magnetospirillum magnetotacticum MS-1]
          Length = 255

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 139/250 (55%), Positives = 172/250 (68%)

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
            AH +RN E+G LH PEFTMLEWYRA ESYE LM+DC  ++  +AE A  +  SF+    
Sbjct: 2   LAHVFRNRERGALHHPEFTMLEWYRAGESYEALMEDCAALLALSAEAAGTRRLSFRGREA 61

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +PF+  E +T+AEAF R+A IDL +T+      DR  L       G+RVA DDTW+D+FS
Sbjct: 62  DPFAPFERLTLAEAFHRFAAIDLLSTISPEGATDRDALADAVMTRGLRVARDDTWADLFS 121

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
           R+L+  IEP+LG    TIL  YP  E+ALA   P DPR  +RFELYAC +EL NA  EL 
Sbjct: 122 RVLVGLIEPHLGQGRPTILCEYPVSEAALARPSPRDPRVAERFELYACGVELANAFGELT 181

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNI 339
           DP EQR RFE EM EK ++Y E YPIDEDFL  L  MP++SGIA+GFDRLVML TGA  I
Sbjct: 182 DPAEQRRRFEAEMAEKVRVYGERYPIDEDFLDALAIMPEASGIALGFDRLVMLATGAPRI 241

Query: 340 NEVIWTPFSQ 349
           ++VIWTP ++
Sbjct: 242 DDVIWTPVTR 251


>gi|42522288|ref|NP_967668.1| lysyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|39574819|emb|CAE78661.1| lysyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 405

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 110/320 (34%), Positives = 167/320 (52%), Gaps = 20/320 (6%)

Query: 29  QSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKK 88
             SLRE+FV   F+E+ + SL   PG E  +  FST L I    ++ L+L TSPE   KK
Sbjct: 103 LQSLREFFVSKGFVELKTPSLVVCPGTEPSLDVFSTNLKI-GSRQQKLFLPTSPELHLKK 161

Query: 89  LLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
            LA G EKIF  A  +RNGE    HQPEF MLEWYRA+ S + + +D + ++   A+   
Sbjct: 162 ALALGAEKIFELAPCFRNGEVTERHQPEFLMLEWYRAYASLKLIKEDTVKLVSHLAQA-- 219

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                   +      +    +VAE F  +   +L           +  L   A++ G+ V
Sbjct: 220 --------MKVAGPVKVTSYSVAELFKIHCGFELKPD------TSKEELKTLAEKIGVDV 265

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
              ++  D F  I ++KIE  L  +    +++YP  ++ALA +      +  RFE Y   
Sbjct: 266 RSAESIDDYFFLIFMDKIESQLPADELVFVEKYPPYQAALARL--TSDGWGDRFEAYWKG 323

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFD 327
           +ELCNA  EL DP  QR R ++++Q+K +++ E   +D++F  CL   +P S GIA+G +
Sbjct: 324 MELCNAFHELNDPTVQRLRSQEDLQKKSEMHKEPVSLDDEFFQCLEAGLPPSGGIALGVE 383

Query: 328 RLVMLVTGANNINEVIWTPF 347
           RL M + G  NI+++   P 
Sbjct: 384 RLFMALLGLQNISDLRLFPQ 403


>gi|307544318|ref|YP_003896797.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307216342|emb|CBV41612.1| lysyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 324

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 95/345 (27%), Positives = 150/345 (43%), Gaps = 29/345 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L +R  +   +R +F E+  +E+++  L +    + H+ + S      
Sbjct: 5   WRPSAEI---ATLRERARLIGEVRAFFAEHGVLEVETPVLGHGGSTDVHLASLSCVATTP 61

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
           +   + L+LQTSPEF  K+LLAAG   IF  A ++R+GE G  H  EFTMLEWYR     
Sbjct: 62  EGRER-LWLQTSPEFHMKRLLAAGSGPIFQLARSFRDGEVGARHNLEFTMLEWYRPGFGL 120

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           ++L+++   +IR                  +           E F     +D       P
Sbjct: 121 DELIEETTRLIRRVLP--------------DDPGPVRLRRYRELFRHRLGLD-------P 159

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                  L   A+  G     +    +    ++   IEP+LG     ++  YPA ++ALA
Sbjct: 160 FTESLGGLRRLAEAQGGLSMDEAARDECLDLLMSLVIEPDLGHEGLDVVIDYPADQAALA 219

Query: 250 NIYP---ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
             +           RFE+Y   +EL N  DEL D  EQR RFE +   ++         D
Sbjct: 220 RRHRDPEDGQWVASRFEVYCRGLELANGYDELTDAEEQRARFEADQAARRSAGLPEVDSD 279

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              +A L + MP+ SG+A+G DRL+ L  G  ++ EV+     ++
Sbjct: 280 ARLVAALASGMPEGSGVALGLDRLIQLALGKTSVAEVMAFATPKA 324


>gi|145611736|ref|XP_369083.2| hypothetical protein MGG_00161 [Magnaporthe oryzae 70-15]
 gi|145018989|gb|EDK03268.1| hypothetical protein MGG_00161 [Magnaporthe oryzae 70-15]
          Length = 537

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/364 (19%), Positives = 127/364 (34%), Gaps = 44/364 (12%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  I  ++R    +  ++E+ +  L  S G  T  R F+T         + L L+
Sbjct: 155 DALRARARIIQTVRRTLDDRGYVEVQTPLLAGSAGGAT-ARPFATTATEFGS-SQHLALR 212

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G ++++     +RN      H PEFTM E+Y A    + LM     +
Sbjct: 213 VAPELWLKRLVMGGMDRVYEVGPCFRNEGVDATHNPEFTMCEFYEAWADLDHLMLMTERL 272

Query: 140 I------------------RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
           +                  R    + +    +          +  +IT  E    +   D
Sbjct: 273 MQLISSDLKAASKDAEAVGRRPWLLPDMDRIASTFCEEGTTPKVHFITRLEQALGFKLPD 332

Query: 182 LGTTLDNPDQPDR-----HLLYLQAQQAGIRVAH------DDTWSDIFSRILIEKIEP-- 228
           L +T    +   +         + A                 T   +   +  + +E   
Sbjct: 333 LESTTALAELIMKLRERGEDADILAAADYPEQGDAATTTAPMTLPKLLDDLGSKYVEKCS 392

Query: 229 NLGINCCTILDRYPAPESALAN---IYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            +G +    +  +PA  + LA          +   R E +   +EL N  +E  +  EQ 
Sbjct: 393 TVGPHRAFFVTHHPACMAPLARSGVCPITKQKVALRAEFFVNGVELANMYEEEFEADEQE 452

Query: 286 HRFEKEMQEKKKI----YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINE 341
            +F    + ++       +E   +    LA    MP + G   G DRL ML TG   I +
Sbjct: 453 RKFNAAARLRRDAVGLNSDEASYV----LAMRGGMPPTGGWGCGIDRLAMLFTGKPRIRD 508

Query: 342 VIWT 345
           V+  
Sbjct: 509 VLTF 512


>gi|147669430|ref|YP_001214248.1| tRNA synthetase, class II (D, K and N) [Dehalococcoides sp. BAV1]
 gi|146270378|gb|ABQ17370.1| tRNA synthetase, class II (D, K and N) [Dehalococcoides sp. BAV1]
          Length = 309

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 90/335 (26%), Positives = 144/335 (42%), Gaps = 42/335 (12%)

Query: 17  RRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH 71
           R+R       L  R  I   +R +F E  F+E+++     S   E +I+           
Sbjct: 6   RQRLGRLEDNLKSRMQILGLIRSFFNEQGFLEVETPVFVPSVAPERYIKPVEC------- 58

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +  YL TSPE   K++LA+G   I+  +  +R+GE+G  H PEF+MLEWYR    Y Q
Sbjct: 59  --QNGYLSTSPELYMKRMLASGYTNIYQISRCFRDGEKGRHHNPEFSMLEWYRVGADYLQ 116

Query: 132 LMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++ D  N+    +     +    +   + +     E +TV +AF      D   T D   
Sbjct: 117 MINDTENLFYHISMKLFGKPQIRYLGHDIDLTPPWERLTVRDAFLNTVGWDPVNTDDE-- 174

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                                      F   L+ K+ P+   +  T+L  YPA  ++LA 
Sbjct: 175 -------------------------KRFDEDLVLKVIPSFQSHRPTVLLDYPAKMASLAR 209

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
           +   +P   +R E +   +E+ NA  EL +P+EQ  RF +E +  +   N      E FL
Sbjct: 210 LKKTNPEVAERAEFFISGLEMANAYSELTNPLEQSARFAEEKKLIEAEQNRRVVTPEIFL 269

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             +  +P  +G A+G DRLVM     + I +V+  
Sbjct: 270 EAVKYLPVCTGNALGIDRLVMFFCNTDQIQDVMPF 304


>gi|320585965|gb|EFW98644.1| lysyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 617

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 70/331 (21%), Positives = 128/331 (38%), Gaps = 18/331 (5%)

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP--LYLQTSPEFSCKKLLAA 92
           +    +F+E+ +  L    G     R F T +           L L+ +PE   K+L+  
Sbjct: 281 FLEAARFVEVQTPILAPLAGGAV-ARPFVTGMTTAGTAAGAAALSLRIAPELWLKRLVVG 339

Query: 93  GEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
           G +++F     +RN      H PEFTM E+Y A+ +  +L+ +   ++   A  A  +  
Sbjct: 340 GLDRVFEIGPCFRNEGIDTTHNPEFTMCEFYAAYWTLPRLIAETERLMAQLAIAAEAEAN 399

Query: 153 SFQNVN-----CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
           +    +     C        +    A      ++L                 ++    + 
Sbjct: 400 AKTAPSLSIGLCAAGGPFVQLAFVPALEAALGLELPDLERPDAYALLRERLPRSDNRAVD 459

Query: 208 ---VAHDDTWSDIFSRILIEKIEPNLGINC--CTILDRYPAPESALANIYPA---DPRFT 259
                  DT + +  R+    +EP    +      +  +PA  S LA          R  
Sbjct: 460 AVGFPPGDTLAKLLDRLAGCLLEPRSAADRDGPLFITHHPACMSPLAKSLVCPLTGQRVA 519

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
            R EL+    EL N  +E  DP EQR + E+++    +  ++   +DE+++A L   +P 
Sbjct: 520 ARAELFVDGRELANMYEEENDPAEQRRKMEQQLIAHDQ-DHDAMAVDENYIAALESGLPP 578

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           + G   G +RLVML +G   I + +     +
Sbjct: 579 TGGWGCGVERLVMLFSGQRRIADCLSFGTLR 609


>gi|73748671|ref|YP_307910.1| lysyl-tRNA synthetase-related protein [Dehalococcoides sp. CBDB1]
 gi|73660387|emb|CAI82994.1| lysyl-tRNA synthetase-related protein [Dehalococcoides sp. CBDB1]
          Length = 309

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 91/335 (27%), Positives = 144/335 (42%), Gaps = 42/335 (12%)

Query: 17  RRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH 71
           R+R       L  R  I   +R +F E  F+E+++     S   E +I+           
Sbjct: 6   RQRLGRLEDNLKSRMQILGLIRSFFNEQGFLEVETPVFVPSVVPERYIKPVEC------- 58

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +  YL TSPE   K++LA+G   I+  +  +R+GE+G  H PEF+MLEWYR    Y Q
Sbjct: 59  --QNGYLSTSPELYMKRMLASGYTNIYQISRCFRDGEKGRHHNPEFSMLEWYRVGADYLQ 116

Query: 132 LMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++ D  N+    +     K    +   + +     E +TV +AF      D   T D   
Sbjct: 117 MINDTENLFYHISMKLFGKIQIRYLGQDIDLTPPWERLTVRDAFLNTVGWDPVNTDDE-- 174

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                                      F   L+ K+ P+   +  T+L  YPA  ++LA 
Sbjct: 175 -------------------------KRFDEDLVLKVIPSFQSHRPTVLLDYPAKMASLAR 209

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
           +   +P   +R E +   +E+ NA  EL +P+EQ  RF +E +  +   N      E FL
Sbjct: 210 LKKTNPEVAERAEFFISGLEMANAYSELTNPLEQSARFAEEKKLIEAEQNRRVVTPEIFL 269

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             +  +P  +G A+G DRLVM     + I +V+  
Sbjct: 270 EAVKYLPVCTGNALGIDRLVMFFCNTDQIQDVMPF 304


>gi|289432697|ref|YP_003462570.1| tRNA synthetase class II (D K and N) [Dehalococcoides sp. GT]
 gi|288946417|gb|ADC74114.1| tRNA synthetase class II (D K and N) [Dehalococcoides sp. GT]
          Length = 309

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 90/335 (26%), Positives = 144/335 (42%), Gaps = 42/335 (12%)

Query: 17  RRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH 71
           R+R       L  R  I   +R +F E  F+E+++     S   E +I+           
Sbjct: 6   RQRLGRLEDNLKSRMQILGLIRSFFNEQGFLEVETPVFVPSVAPERYIKPVEC------- 58

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +  YL TSPE   K++LA+G   I+  +  +R+GE+G  H PEF+MLEWYR    Y Q
Sbjct: 59  --QNGYLSTSPELYMKRMLASGYTNIYQISRCFRDGEKGRHHNPEFSMLEWYRVGADYLQ 116

Query: 132 LMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++ D  N+    +     +    +   + +     E +TV +AF      D   T D   
Sbjct: 117 MINDTENLFYHISMKLFGKPQIRYLGQDIDLTPPWERLTVRDAFLNTVGWDPVNTDDE-- 174

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                                      F   L+ K+ P+   +  T+L  YPA  ++LA 
Sbjct: 175 -------------------------KRFDEDLVLKVIPSFQSHRPTVLLDYPAKMASLAR 209

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
           +   +P   +R E +   +E+ NA  EL +P+EQ  RF +E +  +   N      E FL
Sbjct: 210 LKKTNPEVAERAEFFISGLEMANAYSELTNPLEQSARFAEEKKLIEAEQNRRVVTPEIFL 269

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             +  +P  +G A+G DRLVM     + I +V+  
Sbjct: 270 EAVKYLPVCTGNALGIDRLVMFFCNTDQIQDVMPF 304


>gi|254523913|ref|ZP_05135968.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219721504|gb|EED40029.1| lysyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 318

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 21/331 (6%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQ 79
            L +R  + + +R +F E   +E+++  L  +   E +I +F T+     D   +  +L+
Sbjct: 8   TLQQRAALNALVRRFFAERDVLEVETPILSVAGNTEPNIDSFHTDFSGHVDAGGRRRWLR 67

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPE+  K+LLAAG    +     +RNGE G  H PEFTMLEWYR    + +L+++   +
Sbjct: 68  TSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNPEFTMLEWYRVGWDHHRLVQETTEL 127

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +  A  +                +    ++  E F ++  +D       P   D   L  
Sbjct: 128 VGQALALVG------------RSASLRVLSYRELFQQHVGVD-------PFDADEAALRA 168

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
                 I      T  D    ++   I+P+      T++  +PA ++ALA I P  P   
Sbjct: 169 ALGDVHID-PVGLTRDDWLDLLMTHHIQPHFDDAVMTVVHDWPASQAALARIRPGTPPLA 227

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQS 319
           +RFELY   +EL N   EL D  EQR RF++++Q + +       +DE  LA L  MP  
Sbjct: 228 ERFELYLGPVELANGYHELNDAHEQRARFQRDLQRRHERGQVQPALDEALLAALPSMPAC 287

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +G+A+G DRL+M +     I +V+   F+ +
Sbjct: 288 AGVAVGVDRLLMAMNRTPRIADVLAYDFAHA 318


>gi|84996825|ref|XP_953134.1| lysyl t-RNA synthetase [Theileria annulata strain Ankara]
 gi|65304130|emb|CAI76509.1| lysyl t-RNA synthetase, putative [Theileria annulata]
          Length = 679

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 80/374 (21%), Positives = 142/374 (37%), Gaps = 39/374 (10%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +   PS+    +D    YR R             +LKR  + S +R++  E +F+E+D+ 
Sbjct: 308 LIPPPSKQHGLKDVETRYRLRHLDLLTNELTRYQVLKRFQVISKIRKFLTEREFVEVDTP 367

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS-CKKLLAAGEEKIFCFAHAWRN 106
            LQ+    +     F T       + + + L+ +PEFS  K  +     K+F     +RN
Sbjct: 368 ILQHYACGD-LAEPFETYYK---RLNEKVKLRIAPEFSIKKIFMGLPLTKVFEIGKCFRN 423

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                 H PEFTM+E Y+    Y  ++K   ++I         +             +  
Sbjct: 424 EGSSLRHSPEFTMIEIYQKMADYNTMIKLLEDLINYLLSYGFDEDSVC---KNVFEIKWR 480

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT----WSDIFSRIL 222
               ++    Y  ID+              L  +     +           W  I + I 
Sbjct: 481 SSRFSDLIKEYTGIDITLYSKEELMDKFKELLSKTDNTRLEQIESSMEVITWGSISNEIF 540

Query: 223 IEKIEPNLGINCCTILDRYPAPESALAN----------IYPADPRFTKRFELYACNIELC 272
            + + PN  +     +  +P   S L+            +  +  F+ RFE Y   +E+ 
Sbjct: 541 EKFVVPN--LKYPVHVTHFPTQVSPLSYFESEFSKDNDSHTFEKMFSHRFESYLGGMEIA 598

Query: 273 NACDELLDPIEQRH-RFEKEMQEKKKIYNETYPIDEDFLAC-LTEMPQSSGIAMGFDRLV 330
           N+  E  +P++      E E+ E K    +   +D +FL    + M   +G+ +G DRL+
Sbjct: 599 NSSTEQCNPLKLSKSLLESEIFEGKGNNIKEKEVDREFLNAAFSGMEPMAGLGIGVDRLI 658

Query: 331 MLVTGANNINEVIW 344
           M +T A NI E+  
Sbjct: 659 MYITKAKNIKEIQP 672


>gi|207743625|ref|YP_002260017.1| lysyl-trna synthetase (partial sequence) protein [Ralstonia
           solanacearum IPO1609]
 gi|206595024|emb|CAQ61951.1| probable lysyl-trna synthetase (partial sequence) protein
           [Ralstonia solanacearum IPO1609]
          Length = 234

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/238 (26%), Positives = 99/238 (41%), Gaps = 9/238 (3%)

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           TM+E+Y A+  Y  LM    N+IR AA +     + ++Q    +       +T+A+A  +
Sbjct: 1   TMMEFYAAYTDYRWLMDYTENLIRQAAIDATGSAVLNYQGRELDLSKPFHRLTIAQAIQK 60

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           YA         +    D   L  + +   I        +     + +   E         
Sbjct: 61  YA-----PQYTDAQLADADFLRTELKTFKIDTNAPQFLNAGVGTLQLVLFEETAESQLWE 115

Query: 237 ILD--RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
                 YP   S LA         T+RFEL+    E+ N   EL DP +Q  RF K++++
Sbjct: 116 PTFIIDYPVEVSPLARASDTRASITERFELFITGREIANGFSELNDPEDQAERFRKQVEQ 175

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           K     E    D D++  L   MP + G  +G DRLVML+T + NI +VI  P  +  
Sbjct: 176 KDAGDEEAMYYDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPNIRDVILFPHLRRE 233


>gi|149199813|ref|ZP_01876843.1| lysyl-tRNA synthetase-related protein [Lentisphaera araneosa
           HTCC2155]
 gi|149137101|gb|EDM25524.1| lysyl-tRNA synthetase-related protein [Lentisphaera araneosa
           HTCC2155]
          Length = 292

 Score =  192 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 99/325 (30%), Positives = 151/325 (46%), Gaps = 44/325 (13%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           L +R+ +  +LR +F +  FIE+++     +P  E +I A               +L+TS
Sbjct: 7   LKQRSDLLQALRRFFWQRDFIEVETPIRLLTPALEDYIDAIPANGK---------FLRTS 57

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   K+LL  G EKIF     +R  E G  H+ EFTMLEWY AH  Y ++  D   + +
Sbjct: 58  PELHMKRLLCEGAEKIFQIGACFREHEHGERHREEFTMLEWYEAHCDYRKIADDLQALFK 117

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
             ++                    E +++ +AF  YA I L  ++   +           
Sbjct: 118 FCSKELA-------CREDYFSQTFEVLSLEDAFGSYAKISLDESIAQNN----------- 159

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
                           F  IL  ++EP+LG    T+++ YPA  +AL+   P  P   +R
Sbjct: 160 ----------------FEEILCFEVEPHLGKERPTLINDYPASMAALSRKKPNAPHLAER 203

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           FE+Y   +EL NA  EL D  EQR RF +    +      TY +DE+FL  L   MP++ 
Sbjct: 204 FEVYVDGLELANAYSELTDAQEQRQRFVECQDLRTSQKRITYDLDENFLQALEKGMPEAG 263

Query: 321 GIAMGFDRLVMLVTGANNINEVIWT 345
           GIA+G DRL M++ G  +I+ V+  
Sbjct: 264 GIALGVDRLAMVLFGHKDISSVLAF 288


>gi|146329769|ref|YP_001209514.1| lysyl-RNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|146233239|gb|ABQ14217.1| lysyl-RNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 303

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 102/330 (30%), Positives = 156/330 (47%), Gaps = 32/330 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R  +  R    +S+R++F +   +E+D+  L  +   + ++R+ + E +         YL
Sbjct: 2   REKIAARAQFLTSIRQFFAQKNVLEVDTALLSPAGVTDINLRSLAVEDLG--------YL 53

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            TSPE++ K LLA G   I+  +H +R  E G  H+ EFT+LEWYR   +++QL+ +   
Sbjct: 54  ITSPEYAMKALLADGGGDIYQLSHVFRGDENGRKHRREFTLLEWYRLGWTHQQLIHEVSE 113

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++       +                +    A+ F  Y ++DL          D  L+ 
Sbjct: 114 LVQTLFPKTEK-------------FPVKISPYADLFQEYLDLDLF-------SADDALIL 153

Query: 199 LQAQQAGIRVAHDDTWSD-IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
            +               D +   +   +IEPNLG NC   +  YP  ++ALA I      
Sbjct: 154 QKCVAIVPESRQWQLSRDGMLDLLFTHRIEPNLGANCLQFVCEYPPSQAALARIMQNKQG 213

Query: 258 F--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
                RFELY   IELCN   EL +  EQRHRFE + QE+     +  PIDE FL+ L  
Sbjct: 214 HNVAARFELYIDGIELCNGFWELANAKEQRHRFELDNQERLAAGLKPMPIDEAFLSALER 273

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            +P  +G+A+G DRL ML  G N+I EVI 
Sbjct: 274 GLPDCAGVALGVDRLFMLAQGKNHIAEVIL 303


>gi|126642671|ref|YP_001085655.1| putative lysyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 291

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 92/307 (29%), Positives = 142/307 (46%), Gaps = 22/307 (7%)

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           +E+++  +  +   + H+ +    L   +   +  YLQTSPEF+ K+LLA+G   I+   
Sbjct: 1   MEVETPVVSQAGVTDVHLASVQA-LRHINGKLQTQYLQTSPEFAMKRLLASGSGPIYQIC 59

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +R+ E G  H  EFTMLEWYR     + LM +  ++++   +    ++          
Sbjct: 60  KVFRDDEHGRKHNSEFTMLEWYRPGLDLKALMHETADLLQTCLQHRFGEV---------- 109

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
              P  ++   AF    +I       NP Q     L   A + G+ +   D        +
Sbjct: 110 --RPFILSYKHAFQDRLDI-------NPLQATLKQLKDTANRVGLNLDLGDDRLAYMDLL 160

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIY--PADPRFTKRFELYACNIELCNACDELL 279
               +EP+LG +    L  +P   ++LA +           RFE+Y   +EL NA DELL
Sbjct: 161 FSHFVEPSLGFDAPVFLTDFPPEMASLAKVKLDEDGEEVAARFEVYIEGLELANAYDELL 220

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNI 339
           D    R RFE +  E+ K      P+DE  LA L  MP+ SGIA+G DRL+M+ T    I
Sbjct: 221 DADVLRSRFEADNAERAKQGLHVMPLDEHLLAALPHMPECSGIALGVDRLLMVATDQLKI 280

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 281 EKVIAFP 287


>gi|254428257|ref|ZP_05041964.1| tRNA synthetases class II (D, K and N) subfamily [Alcanivorax sp.
           DG881]
 gi|196194426|gb|EDX89385.1| tRNA synthetases class II (D, K and N) subfamily [Alcanivorax sp.
           DG881]
          Length = 311

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 85/344 (24%), Positives = 139/344 (40%), Gaps = 39/344 (11%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           +  R  +  ++R +F +   +E+D+  L     ++ HI+         
Sbjct: 4   WQPTASL---EAIKARAELLRTVRAFFDDRNVLEVDTPQLARYGVSDLHIQCIPVPGYG- 59

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
                  YLQ+SPE+  K+LLAAG   I+    A+R+GE G  H PEFTMLEWYR     
Sbjct: 60  -------YLQSSPEYHMKRLLAAGSGPIYQVCKAFRDGEAGGRHNPEFTMLEWYRPGF-- 110

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
                   ++I+    +      S Q+           +T          +D  T  D+ 
Sbjct: 111 -----ALDDLIQECLALFAALFPSAQSKTYRFRGLFRDVT---------GLDPLTAHDSD 156

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                                    +     ++  ++E  L     +++  +P   +ALA
Sbjct: 157 LITHAESCGA---------PEGLDKTAAVDYLMATEVEAALPAEQLSVVTNFPGWAAALA 207

Query: 250 NIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                +   T  +RFE+Y   +EL N   EL DP EQR RFE++   +          D 
Sbjct: 208 QTRKDEDGTTVARRFEIYYRGLELANGYQELTDPKEQRRRFEQDNTLRNAHGLSPMAADP 267

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             L  +   +P  SG+A+G +RL+M   G   I++VI  P+S++
Sbjct: 268 FLLDAMDAGLPACSGVAVGMERLLMAQQGTGRIDDVIAFPWSRA 311


>gi|218461425|ref|ZP_03501516.1| lysyl-tRNA synthetase protein [Rhizobium etli Kim 5]
          Length = 264

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 142/259 (54%), Positives = 183/259 (70%)

Query: 89  LLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           +LAAGE++I CFAH +RN E+G LH PEFTMLEWYRA ESYE +M DC+ I+  AAE A 
Sbjct: 1   MLAAGEQRISCFAHVYRNRERGPLHHPEFTMLEWYRAGESYESMMMDCVRILALAAETAK 60

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                ++    +PF+ PE ++VAEAF R+A IDL  ++      DR  L  + ++AG+RV
Sbjct: 61  TDRLGYRGRESDPFAGPERVSVAEAFERHAGIDLLASVAADGSTDREHLAAELRRAGMRV 120

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
           A DD W+D+FSR+L+EKIEP+LG    TILD YP  E+ALA     DPR  +RFELYAC 
Sbjct: 121 AEDDGWADLFSRVLVEKIEPHLGFGRITILDEYPVSEAALARPSARDPRVAERFELYACG 180

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDR 328
           +EL N   EL +  EQ+ RFE EM EK ++Y E YPIDED LA L+ MP++SGIA+GFDR
Sbjct: 181 VELANGFGELTNAAEQKRRFEIEMAEKMRVYGENYPIDEDLLAALSSMPEASGIALGFDR 240

Query: 329 LVMLVTGANNINEVIWTPF 347
           LVML TGA+ I++V+W P 
Sbjct: 241 LVMLATGASRIDQVLWAPV 259


>gi|323156681|gb|EFZ42822.1| lysyl-tRNA synthetase [Escherichia coli EPECa14]
          Length = 403

 Score =  192 bits (487), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 25/265 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPE 166
                H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++     +     E
Sbjct: 266 GISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFE 325

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +T+ EA  +Y         D  D  +       A+  GI V        I + I  E  
Sbjct: 326 KLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVA 380

Query: 227 EPNLGINCCTILDRYPAPESALANI 251
           E +  +   T +  YPA  S LA  
Sbjct: 381 EAH--LIQPTFITEYPAEVSPLARR 403


>gi|260886923|ref|ZP_05898186.1| lysine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260863352|gb|EEX77852.1| lysine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 216

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 10/214 (4%)

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++    +V      +++    +  S+   I++ +A       D  +     +        
Sbjct: 1   MLPGREDVLGTTALTYEGTEID-LSKIRRISMNDAVKEATGKDFMSAQTVEE------AR 53

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A   G+          I +     K+E +  +   T +  +P   S LA   P DPR 
Sbjct: 54  AMADAIGVAYEEKHGIGGILNEAFEAKVEES--LIQPTFITGHPTEISPLAKRNPEDPRI 111

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           T RFE Y    EL N   EL DPI+Q+ RF +++++++   +E +P+D DF+  +   +P
Sbjct: 112 TDRFEFYVYGRELANGFTELNDPIDQKERFLEQVKQREAGDDEAHPMDSDFITAMEYGLP 171

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            + G+ +G DRLVML+T +++I +V++ P  +  
Sbjct: 172 PTGGLGIGIDRLVMLLTDSSSIRDVLFFPHMRPE 205


>gi|323303244|gb|EGA57042.1| Msk1p [Saccharomyces cerevisiae FostersB]
          Length = 517

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 133/348 (38%), Gaps = 27/348 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             LL R  I   LR++  +  F+E+++  L          + F T     DH+     L+
Sbjct: 166 QTLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAM-AKPFITSSKDFDHLE----LR 220

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+ +G +K++     +RN      H  EF+ LE+Y  + S + ++    ++
Sbjct: 221 IAPELWLKRLIISGLQKVYEIGKVFRNEGIDSXHNAEFSTLEFYETYMSMDDIVARTEDL 280

Query: 140 IRCAAE-----------VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID---LGTT 185
            +                  +              +   +       +   ID    G  
Sbjct: 281 FKFLITNLQKFFQDTRLPVPKTFSELHLALSENNWKFRKVEFLPTLNKELGIDLMNSGLD 340

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIEKIEP-NLGINCCTILDRYP 242
           ++ P +  + L    A +      +    S   I +++    +E  +      T++   P
Sbjct: 341 INKPSELLKALPKDIAXKYFPSADNTGQLSSLQILNKLSDVFLEQRHCQSTLPTVIYHQP 400

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A  S LA   P + + TKRFE++    E  NA +E   P  Q  +F ++ Q  +   N+T
Sbjct: 401 AILSPLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQLQKFLQQKQINELTGNKT 460

Query: 303 Y----PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 ID  ++  +   MP   G  +G DRL ML      I EV+  
Sbjct: 461 ETLSPVIDXQYVETMKYGMPPVGGFGLGIDRLCMLFCDKKRIEEVLXF 508


>gi|51244698|ref|YP_064582.1| lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50875735|emb|CAG35575.1| probable lysyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 300

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 110/325 (33%), Positives = 157/325 (48%), Gaps = 37/325 (11%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           L  R     ++R +F E  F+E+D+         E+ I   S             +LQTS
Sbjct: 7   LHTRAAFLQAIRAFFYEQGFLEVDTPVRSPVLIPESTIEPISC---------GDFFLQTS 57

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   K++LAAG EKIF     +R GE+G LH  EFTMLEWYR  E Y  LM DC  ++ 
Sbjct: 58  PELYMKRILAAGNEKIFQICPCFRKGERGRLHAEEFTMLEWYRLDEDYHALMADCQQLVS 117

Query: 142 CAAEVANQKIFSFQNVNCNPFSE-PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
             AE           ++    +   + +TVAEAFA ++ I+L   + +            
Sbjct: 118 YLAEALQAHTSELGRIDRAYLNGSWQRLTVAEAFALWSPIELKQAMAD------------ 165

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
                          DIF  +L+E IEP LGI+  T L  YPA  ++LA +  ++    +
Sbjct: 166 ---------------DIFEEMLVEYIEPRLGIDSPTFLYDYPASMASLARLSASNSEVAE 210

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   IEL N   EL D +EQ  RF++E+   K+       +   FL  L  + +++
Sbjct: 211 RFELYMHGIELANGFSELTDEVEQEMRFKEELAAIKREGRWQATLPVKFLQELAGLDKAT 270

Query: 321 GIAMGFDRLVMLVTGANNINEVIWT 345
           GIA+G DRL+ML  G  +I EV+  
Sbjct: 271 GIALGLDRLLMLFLGKESIAEVVSF 295


>gi|312136815|ref|YP_004004152.1| aspartyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224534|gb|ADP77390.1| aspartyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 438

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 64/355 (18%), Positives = 122/355 (34%), Gaps = 63/355 (17%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D     R               RN + +S+R++F EN FIEI++  L   +    T +  
Sbjct: 124 DTRLDARFLDLRKLNVNAIFKIRNKMLNSVRKFFEENGFIEINTPKLVASATEGGTALFP 183

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTML 120
            +       +  +  +L  SP+   + ++AAG EK++     +R  E     H  E   +
Sbjct: 184 VT-------YFEREAFLGQSPQLYKQMMMAAGFEKVYEIGPIFRAEEHDTLRHLNEAISI 236

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF----QNVNCNPFSEPEYITVAEAFAR 176
           +   +  ++E +MK   N+I    E  N+               P +  E IT  E    
Sbjct: 237 DIEVSFANHEDVMKILENLIVRVIEDLNKSCKKELKILNKKLEVPETPFERITYDEV--- 293

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
              I++  +     +    L     +  G  +                        +   
Sbjct: 294 ---IEIVNSKGVVLEYGEDLSRAAEKALGEEM------------------------DNYY 326

Query: 237 ILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            +  +P             +P     F+L   ++E+ +    + D      R +++    
Sbjct: 327 FIIDWPTSIKPFYVMPNEKNPEKCYAFDLMYKDLEISSGAMRIHDHDLLVKRIKEQ---- 382

Query: 296 KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +  E++     +L      MP  +G  +G +R +M +TG  NI E I  P  +
Sbjct: 383 -DLNPESFKY---YLDAFKYGMPPHAGWGLGAERFMMALTGVKNIRETILFPRDR 433


>gi|262197352|ref|YP_003268561.1| tRNA synthetase class II (D K and N) [Haliangium ochraceum DSM
           14365]
 gi|262080699|gb|ACY16668.1| tRNA synthetase class II (D K and N) [Haliangium ochraceum DSM
           14365]
          Length = 416

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 106/314 (33%), Positives = 153/314 (48%), Gaps = 17/314 (5%)

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +F E  F+E+++  L  SPG E H+              +  +L TSPEF  K+LLAAG 
Sbjct: 112 FFAERDFLEVETPLLVGSPGLEVHLDPVP--------AGRGQWLITSPEFQMKRLLAAGL 163

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL-MKDCMNIIRCAAEVANQKIFS 153
           E+++     +R  E G  H  EFTM+EWYRA   ++ +       +   A  VA      
Sbjct: 164 ERVYTVCKCFRADELGAQHNVEFTMIEWYRAWAGWDDILGDTEALVAAVAEAVAGAPRCV 223

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
                 +       +TVAEA AR+A +                L  +A+ AG+ +   + 
Sbjct: 224 LGERVIDLSPPWPRLTVAEAMARFAGV------AVSGAESAAELAQRARAAGVDIGSAEA 277

Query: 214 WSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
           W DIF  + ++++EP    +     L  +PAP +ALA   P  P   +RFE+Y   IELC
Sbjct: 278 WDDIFYTVFVDRVEPALAALERPVALVDWPAPLAALARRKPGAPHLVERFEVYVAGIELC 337

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVM 331
           NA  EL+D  EQR RF     E+ +        DE  L  L   +P  +GIA+G DRL+M
Sbjct: 338 NAFGELVDAAEQRARFAASAAERARRGRAHLATDEALLRALDEGLPACAGIALGIDRLLM 397

Query: 332 LVTGANNINEVIWT 345
           LVTGA++I EV+  
Sbjct: 398 LVTGASHIREVLTF 411


>gi|283780177|ref|YP_003370932.1| tRNA synthetase class II (D K and N) [Pirellula staleyi DSM 6068]
 gi|283438630|gb|ADB17072.1| tRNA synthetase class II (D K and N) [Pirellula staleyi DSM 6068]
          Length = 338

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 92/337 (27%), Positives = 144/337 (42%), Gaps = 22/337 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ---DHIRKPL 76
             + +R+ +  ++R++F    F+E+++  L      + H+      L             
Sbjct: 18  EMIARRSQLLRTIRDFFHTRDFLEVETPLLSRDSVIDLHLDPLPVTLFKDPVAYKAGPTY 77

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           +LQTSPEF  K+LL  G   I+    A+R GE G LH PEFTMLEWYR            
Sbjct: 78  WLQTSPEFGMKRLLVTGIPAIYQITRAFRGGETGPLHNPEFTMLEWYRVG-DNYAQGMSL 136

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ-PDRH 195
           +                          EP  +T  EAF +YA +   +            
Sbjct: 137 LADFAQQVIARG---------------EPVVMTFDEAFVKYAGLSALSATSLELSHKVLE 181

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           +  +     G  V        +   +L + ++P LG     IL  +PA +SALA +    
Sbjct: 182 IPQIAGLLDGEEVESSFDRDFLIDLLLTQLVQPQLGTAAPVILCDFPATQSALARVRETS 241

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-- 313
           P   +RFELY   IEL N   ELLD    + R      ++K       P++ + L  +  
Sbjct: 242 PPVAERFELYVDGIELANGYHELLDAEVLQKRNAIAQSQRKSEGKYAPPMESELLRAMQA 301

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           + +P  SG A+G DRL+M+++ A +I+EVI  P  ++
Sbjct: 302 SALPACSGTAVGVDRLLMVISQARSIDEVITFPIDRA 338


>gi|190575031|ref|YP_001972876.1| putative lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190012953|emb|CAQ46585.1| putative lysyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
          Length = 318

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 21/330 (6%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQT 80
           L +R  + + +R +F E   +E+++  L  +  +E +I +F T+     D   +  +L+T
Sbjct: 9   LQQRAALNALVRRFFAERDVLEVETPILSVAGNSEPNIDSFHTDFTGHVDAGGRRRWLRT 68

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LLAAG    +     +RNGE G  H PEFTMLEWYR    + +L+++   ++
Sbjct: 69  SPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNPEFTMLEWYRVGWDHHRLVQETAELV 128

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
             A  +                +    ++  E F ++  +D       P + D   L   
Sbjct: 129 GQALALVG------------RSATLRVLSYRELFQQHVGVD-------PFKADEAALRAA 169

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
                I      T  D    ++  +I+P       T++  +PA ++ALA I    P   +
Sbjct: 170 LGDVHID-PVGLTRDDWLDLLMTHRIQPQFDDTVMTVVHDWPASQAALARIRAGTPPLAE 228

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
           RFELY   +EL N   EL D  EQR RF++++Q + +       +DE  LA L  MP  +
Sbjct: 229 RFELYLGAVELANGYHELNDAHEQRARFQRDLQRRHERGQVQPALDEALLAALPSMPACA 288

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           G+A+G DRL+M +     I +V+   F+ +
Sbjct: 289 GVAVGVDRLLMAMNRTPRIADVLAYDFAHA 318


>gi|94676569|ref|YP_589016.1| lysyl-tRNA synthetase-like GenX [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|166229782|sp|Q1LSP8|SYK3_BAUCH RecName: Full=Uncharacterized protein YjeA
 gi|94219719|gb|ABF13878.1| lysyl-tRNA synthetase-like GenX [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 327

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 88/312 (28%), Positives = 145/312 (46%), Gaps = 29/312 (9%)

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK---PLYLQTSPEFSCKKLLAAGEEK 96
             +E+++  + ++   + ++  F T L   + + +   P+YL TSPE+  K+LLAAG   
Sbjct: 34  GLLEVETPVMSHTTVPDIYLFPFQTNLYFLEKVPEKGVPMYLITSPEYHMKRLLAAGSGP 93

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN 156
           IF   H++RN E G  H PEFT+LEWYR + +   +M +    ++               
Sbjct: 94  IFQICHSFRNQEYGNYHNPEFTLLEWYRPYYNMVDIMDEVNIFLQ--------------- 138

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR--VAHDDTW 214
                    E ++  + F  +  ID       P   +   L     +  +   ++  +  
Sbjct: 139 -TIIHCDSAEMLSYQQVFRLHVGID-------PLLAELDELNQVLVKFNLSSTISLYNDR 190

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
             +   + +  + P+LG N    +  +PA +S LA +   D R  +RFE+Y   IEL N 
Sbjct: 191 DKLLDFLFLMLVRPHLGNNKPVFIYNFPASQSLLAELNSDDHRVAERFEVYFHGIELANG 250

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLV 333
             EL D   QR RF +E  ++  +      IDE  LA L   +P  SG+A+G DRL+ML 
Sbjct: 251 SRELTDADLQRERFMQENNKQVAMNRPPRLIDEQLLAALECGLPSCSGVALGIDRLLMLT 310

Query: 334 TGANNINEVIWT 345
             A +I+EV+  
Sbjct: 311 LKAKHISEVMAF 322


>gi|332297414|ref|YP_004439336.1| Lysine--tRNA ligase [Treponema brennaborense DSM 12168]
 gi|332180517|gb|AEE16205.1| Lysine--tRNA ligase [Treponema brennaborense DSM 12168]
          Length = 348

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 146/344 (42%), Gaps = 18/344 (5%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQ 79
            L  R  I   +R +F+E  ++E+D+ +L      ET +  F T+ I       +PLYL 
Sbjct: 1   MLQFRARIMQKIRTFFIERGYLELDTPALSRDLIPETCLEVFRTDYIEPWSGGTQPLYLV 60

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            SPE   KK++A     +F  +  +RN    G +H PEFTMLE+Y  +  Y        +
Sbjct: 61  PSPEIYMKKIIARHAVSVFQLSKCYRNVESTGRIHSPEFTMLEYYTMNADYAVSAAVTED 120

Query: 139 IIRCAAEVA--NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           +               + ++           +T+ +AF  YA   L    +  D  DR  
Sbjct: 121 LFTALLPAPEPAAADGTVRDPYSPLRPPFIRLTMDDAFKAYAGFRLSDCPEAADLADRAA 180

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN------ 250
               A+ A         W D++  +L++ +EP L       L  YPA    LA       
Sbjct: 181 KLGIAEPAEHPFRE-WPWDDLYELLLVQCVEPALPREKPVFLTDYPAKVPCLAKDVTDAV 239

Query: 251 ---IYPADPRFT----KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                  D   T    +R+ELYA  IEL N   E  DP + +  FE E + K+      +
Sbjct: 240 HGSPSEQDSGRTPLWKERWELYAQGIELANCYTEETDPDKVKAYFETEGKLKQNTARVPH 299

Query: 304 PIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ID D+     + P  SG A+G DRL+ L+ G ++I+ V+  P 
Sbjct: 300 AIDPDYWKIFRKFPACSGSALGVDRLIALLAGCSSIDSVLPFPL 343


>gi|71028924|ref|XP_764105.1| lysyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68351059|gb|EAN31822.1| lysyl-tRNA synthetase, putative [Theileria parva]
          Length = 708

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 77/372 (20%), Positives = 139/372 (37%), Gaps = 37/372 (9%)

Query: 1   MHQIPSQPWWNRD--FHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +   PS+    +D    YR            R  +LKR  I + +R +  E  F+E+D+ 
Sbjct: 339 LIPPPSKQHGLKDIETRYRLRHLDLLTNELSRYQVLKRFQIIAKIRRFLCERGFVEVDTP 398

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS-CKKLLAAGEEKIFCFAHAWRN 106
            L +    +     F T       + + + L+ +PEFS  K  +     K+F     +RN
Sbjct: 399 ILNHYTSGD-LAEPFETYYK---RLNEKVKLRIAPEFSIKKIFMGLPLTKVFEIGKCFRN 454

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                 H PEFTM+E Y+    Y  ++K   ++I                 +     +  
Sbjct: 455 EGSSLRHSPEFTMIEIYQKMADYNTMIKLLEDLINSLLSYG---FNDDAVCDNVFEVKWR 511

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT----WSDIFSRIL 222
               ++    Y  +D+ +  ++        +  +   A             W  I + I 
Sbjct: 512 RAKFSDLIKEYTGVDITSYNEDELLDKFMEMISKTDSARSEQIESSMGRVNWGSIANEIF 571

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPR--------FTKRFELYACNIELCNA 274
            + + PN  +     +  +P   S L                 F+ RFE Y   +E+ N+
Sbjct: 572 EKFVVPN--LTYPVHVTHFPTQVSPLTYFDEKSANNDGSNEKLFSNRFESYLGGMEIANS 629

Query: 275 CDELLDPIEQRH-RFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVML 332
             E  +P++      + E+ E K    +   +D++FL      M   +G+ +G DRL+M 
Sbjct: 630 STEQCNPLKLSKSVLDSEISEVKDNNLKGKEVDKEFLNAAFCGMEPMAGLGIGVDRLIMY 689

Query: 333 VTGANNINEVIW 344
           +T A NI E+  
Sbjct: 690 ITKAKNIKEIQP 701


>gi|238910504|ref|ZP_04654341.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 268

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 90/281 (32%), Positives = 138/281 (49%), Gaps = 26/281 (9%)

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
              LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEWYR H    +L
Sbjct: 11  GMNLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDMYRL 70

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M +  ++++   +                    E ++  +AF R+  ID       P   
Sbjct: 71  MNEVDDLLQQVLDC----------------QPAESLSYQQAFQRHLEID-------PLSA 107

Query: 193 DRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+  L   A +  +    D  +    +   +    +EP++G    T +  +PA +++LA 
Sbjct: 108 DKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYHFPASQASLAQ 167

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
           I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++        PID++ L
Sbjct: 168 ISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLL 227

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 228 DALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA 268


>gi|254498592|ref|ZP_05111312.1| lysyl tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254352183|gb|EET10998.1| lysyl tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 313

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 79/346 (22%), Positives = 136/346 (39%), Gaps = 39/346 (11%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L +R  + +++R++F    ++E+D+  +      + ++          
Sbjct: 2   WQPSASI---DLLRQRAQLIATIRDFFNGRGYLEVDTPIMARYGTTDVYLSNIKATFR-- 56

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
                   LQTSPE+  K+LLAAG   IF  A  +R+ E G  H PEFT+LEWY+    +
Sbjct: 57  ---DAHYCLQTSPEYHMKRLLAAGSGPIFQLARVFRDDELGRWHNPEFTLLEWYQLGIDH 113

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             LM +    ++                           T  +AF    ++D       P
Sbjct: 114 HALMAEMDLFLQA----------------VMQAQPMLKKTYQQAFLEACDVD-------P 150

Query: 190 DQPDRHLLYLQAQQAGIRV---AHDDTWSDIFSRILIEKIEPNLGIN-CCTILDRYPAPE 245
                  L     +  +       +         ++   +EP LG       +  +P+ +
Sbjct: 151 LTASVAQLRQVLVRYDLDYVFPPEEHDRDQYLFLLMSHIVEPFLGKESAPVAVYNFPSSQ 210

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +ALA I        +RFE+Y   +EL N   EL D   Q  RF +++  +++        
Sbjct: 211 AALAKIN---AGVAERFEIYYQGVELANGFHELTDADAQAQRFAQDLHLRQEKGFPAVEA 267

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           D   L  L   +P  SG+A+G DRL+ +    + I  VI   F+++
Sbjct: 268 DHYLLQALKHGLPACSGVALGIDRLLAIALKQSAIANVISFDFTRA 313


>gi|213608045|ref|ZP_03368871.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
          Length = 267

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 90/281 (32%), Positives = 138/281 (49%), Gaps = 26/281 (9%)

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
              LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEWYR H    +L
Sbjct: 10  GINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDMYRL 69

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M +  ++++   +                    E ++  +AF R+  ID       P   
Sbjct: 70  MNEVDDLLQQVLDC----------------QPAESLSYQQAFLRHLEID-------PLSA 106

Query: 193 DRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+  L   A +  +    D  +    +   +    +EP++G    T +  +PA +++LA 
Sbjct: 107 DKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYHFPASQASLAQ 166

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
           I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++        PID++ L
Sbjct: 167 ISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLL 226

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 227 DALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA 267


>gi|294934243|ref|XP_002781041.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239891231|gb|EER12836.1| lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 482

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 105/282 (37%), Gaps = 29/282 (10%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           MH +P   +  +D    +R+R               +R+ I   +R +     F+E+++ 
Sbjct: 209 MHMLPKAQFGLKDQEVRFRQRYLDLIMNPHVRETFQRRSQIIGYIRSFLGNRGFMEVETP 268

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G  +  + F T     + +   LY++ +PE   K L+  G +++F     +RN 
Sbjct: 269 MMNMIAGGAS-AKPFITH---HNELDLDLYMRIAPELYLKMLVVGGLDRVFEIGKNFRNE 324

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV--------NC 159
                H PEFT  E+Y A+  Y  LM     +I    +          +           
Sbjct: 325 GIDLTHNPEFTSCEFYMAYADYNDLMNMTEEMISGMVKSIFGTYMVTFHPEGPEGPAKEI 384

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           N     + +++ E   R A + L    D   +  R  L   A +  +      T + +  
Sbjct: 385 NFAPPWKRVSMVEEIERQAGVSLN--RDFAAEEARQQLDDLATKFDVECPAPRTSARLLD 442

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++    IE    I   T +  +P   S LA  + + P  T+R
Sbjct: 443 KLCGFFIEDK--IVSPTFITEHPQIMSPLAKWHRSKPGLTER 482


>gi|78486081|ref|YP_392006.1| lysine--tRNA ligase [Thiomicrospira crunogena XCL-2]
 gi|78364367|gb|ABB42332.1| truncated lysyl-tRNA synthetase GenX [Thiomicrospira crunogena
           XCL-2]
          Length = 324

 Score =  189 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 91/327 (27%), Positives = 148/327 (45%), Gaps = 22/327 (6%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD-HIRKPLYLQT 80
           L KR+     LR +F     +E+D+  L  +   + H+R+  T + +     ++P +L T
Sbjct: 12  LKKRSQWLKDLRAFFYARSVMEVDTPMLSSAATPDLHLRSLKTWVQVPGIKEKQPFFLHT 71

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  K+LL AG   IF     +R+ +    HQ EFT+LEWYR     +++M +   +I
Sbjct: 72  SPEYPMKRLLCAGSGDIFYLGKVFRDEDLSPRHQVEFTLLEWYRLGFDLKEMMTETAAVI 131

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +      + ++                ++  +AF +YA I         +          
Sbjct: 132 QLIIGPRSTEM----------------LSYEQAFRQYAGIQNIHVATAEECQLCLARNQI 175

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
            +  G+       W  +      E IEP LG N  T L  YPA ++ALA I   + +   
Sbjct: 176 PEIVGVDADDKALWEQLVL---TEVIEPQLGRNAITCLFHYPARDAALAKISHENAQVAL 232

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT--EMPQ 318
           RFE++   +EL N   EL  P   R RFE  + E+++   ++ P+D + L  L    +P 
Sbjct: 233 RFEVFVEGMELANGYQELQAPELYRSRFEASLSEREEHGFDSVPLDVNLLDALQEAGLPD 292

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWT 345
            SG+A+G DRL  L    +NI  V+  
Sbjct: 293 CSGVALGVDRLFALALACDNIESVMPF 319


>gi|325970662|ref|YP_004246853.1| lysine--tRNA ligase [Spirochaeta sp. Buddy]
 gi|324025900|gb|ADY12659.1| Lysine--tRNA ligase [Spirochaeta sp. Buddy]
          Length = 330

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 90/331 (27%), Positives = 152/331 (45%), Gaps = 24/331 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
             R+++  ++R +F E  + E+D+  L  +   E+ I  FST           LYL  SP
Sbjct: 6   KFRSILYRNIRSFFDERDYTEVDTPILSTTLIPESTIENFSTRFQNPFLPSTELYLVPSP 65

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           E   K+L+A G   ++   H +RN  + G +H PEF+MLE+Y      E+ ++    +  
Sbjct: 66  EIFMKQLIARGLGSVYQIGHCFRNSEQLGHIHNPEFSMLEYYTVGADEEESIRITEELFA 125

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
                 + K                 ++VAEA  +YA +DL              L  +A
Sbjct: 126 SLLPKDSPKYLR---------PPFARLSVAEAMQQYAGVDLDKHQKQ------ATLAQEA 170

Query: 202 QQAGIRVA-HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           ++ G+ +    ++W + F+RI +  +EPNL      +L+RYP     LA     D  + +
Sbjct: 171 KRLGLTLPDEPESWEETFNRIFLTFVEPNLPQESPLVLERYPKQIECLAQ---QDGAYRR 227

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFLACLTEM 316
           R+ELY   +E+ N  DE  D    +  +  E    +Q++++       +D    +  + M
Sbjct: 228 RWELYVKGVEVANCYDEDRDQATIQAYYRDEYARLVQKREESGTVIPDVDPSLASVFSAM 287

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           P  SG+AMG DRL ML+ G +++  VI  P 
Sbjct: 288 PPCSGVAMGLDRLQMLLMGKSDLEGVILFPL 318


>gi|326482806|gb|EGE06816.1| lysyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 515

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/337 (20%), Positives = 124/337 (36%), Gaps = 66/337 (19%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R++I  S+R +F   +F+E+++  L    G     + F T         +PL L+
Sbjct: 226 NVLRARSLITHSMRNFFANREFMEVNTPILASKSGGAI-AQPFVTSATEF--PDRPLSLR 282

Query: 80  TSPEFSCKKLLAAGEEKIFCF-AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            +PE   K+L+  G +++F   A   RN      H PEF                     
Sbjct: 283 IAPELWLKRLVVGGFDRVFENRAFHSRNEGLDKTHNPEF--------------------- 321

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
                                         T  E +  +A+++      + D     +  
Sbjct: 322 ------------------------------TTCEFYQAFADLESLIETTDLDDALSQVKE 351

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR- 257
             A    + +   +T   +  ++    +E    +   T +  +P   S L+  Y      
Sbjct: 352 TFA-TLSLPLPAHETLPRLLDKLCSTYVESQ--LVEPTFIMNHPECMSPLSKSYRHPENG 408

Query: 258 --FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACLT 314
              + R EL+    E+ N  +E   P EQR +F++++  +     E    +DE +L  L 
Sbjct: 409 QIVSARAELFVEGKEIMNMYEEENSPFEQRRKFQQQLSFR---DPENAGELDEGYLQTLE 465

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +P + G   G DR+ ML TGA  I++V+     +S
Sbjct: 466 WGLPPTGGWGCGIDRVCMLFTGARRISDVLSFGNLRS 502


>gi|332159186|ref|YP_004424465.1| aspartyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034649|gb|AEC52461.1| aspartyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 438

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 59/364 (16%), Positives = 115/364 (31%), Gaps = 51/364 (14%)

Query: 3   QIPSQPWWN----RDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM- 47
            +P  P        D     R               R+ +  ++RE+F E  FIEI +  
Sbjct: 104 PLPLDPTGRVKAELDTRLDNRFIDLRNPKVMAIFKIRSGVFRAVREFFYEEGFIEIHTPK 163

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +    T +           +  K  +L  SP+   + ++A G +++F  A  +R  
Sbjct: 164 IIATATEGGTELFPLK-------YFEKDAFLAQSPQLYKQMMMATGLDRVFEIAPIFRAE 216

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  E   ++   A    E+ + D +  +        ++                
Sbjct: 217 EHNTTRHLNEAWSIDAEMAFIESEEEVMDLLERLVVYVVNYVREN--------------- 261

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                E   +    +L        +          +  G  +   +       ++L   +
Sbjct: 262 ----HERELKILEFELDKPKQPFPRLTYDKALEILKDLGKEIPWGEDIDTEGEKLLGRYM 317

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             N G     I       +      Y   P   + F+L    +E+ +             
Sbjct: 318 LENEGAELYFIYKYPSEAKPFYIMKYDDKPEICRAFDLEYRGVEISSGGQREHRHDI--- 374

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
              ++++EK  +  E++   E +L      MP   G  +G +RL+M +    NI EVI  
Sbjct: 375 -LVQQIKEK-GLNPESF---EFYLKAFEYGMPPHGGFGLGAERLIMRMLDIGNIREVILF 429

Query: 346 PFSQ 349
           P  +
Sbjct: 430 PRDR 433


>gi|18977241|ref|NP_578598.1| aspartyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|22257052|sp|Q8U2G6|SYD_PYRFU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|18892906|gb|AAL80993.1| aspartyl tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 438

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 60/366 (16%), Positives = 116/366 (31%), Gaps = 51/366 (13%)

Query: 3   QIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM- 47
            +P  P        D     R               R+ +  ++RE+F    FIEI +  
Sbjct: 104 PLPLDPTGKVKAELDTRLDNRFIDLRNPKVMAIFKIRSNVFRAIREFFYNEGFIEIHTPK 163

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +    T +           +     +L  SP+   + ++A G +K+F  A  +R  
Sbjct: 164 IIATATEGGTELFPIK-------YFENDAFLAQSPQLYKQIMMATGLDKVFETAPIFRAE 216

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  E   ++   A    E+ + D +  +   A    ++                
Sbjct: 217 EHNTTRHLNEAWSIDAEIAFIENEEEVMDVLENLVVYAINYVREH--------------- 261

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                E   +    +L        +             G  +   +       ++L + +
Sbjct: 262 ----NERELKILEFELEEPKQPFPRVTYDKALEILSDLGKEIPWGEDIDTEGEKLLGKYM 317

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             N G+    I       +      Y   P   + F+L    IE+ +          +  
Sbjct: 318 SENEGVELYFIYKYPSEAKPFYIMKYDEKPEICRAFDLEYRGIEISSGGQREH----RYE 373

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
              ++++EK  +  E++   E +L      MP   G  +G +RL+M +    NI EVI  
Sbjct: 374 VLLEQIKEK-GLNPESF---EFYLKAFKYGMPPHGGFGLGAERLIMRMLNIGNIREVILF 429

Query: 346 PFSQSN 351
           P  +  
Sbjct: 430 PRDRKR 435


>gi|288931892|ref|YP_003435952.1| aspartyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894140|gb|ADC65677.1| aspartyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 429

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 65/352 (18%), Positives = 126/352 (35%), Gaps = 58/352 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIR 60
           D     R               R+ + ++ RE+F E  FIE+++  +  +   G      
Sbjct: 116 DTRLDHRFLDLRKHRVFAIFRVRSEVLNATREFFHERGFIEVNTPKIVSTATEGG----- 170

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTM 119
              TEL    +  +  +L  SP+   + L+AAG +++F     +R  E     H  E T 
Sbjct: 171 ---TELFPITYFEREAFLNQSPQLYKQTLMAAGFDRVFEIGPIFRAEEHNTVRHLNEATS 227

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++   +   +  +MK    +I    E                          E   +Y N
Sbjct: 228 IDIEVSFTDHNGVMKYLEELIVYIHERV-----------------------VENCEKYLN 264

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
             L   L+ P++P   + Y +A +  +    +  W + FS   ++ +  ++       + 
Sbjct: 265 W-LNVKLEVPEKPFERITYDEALEI-VSRKEEIPWGEDFSTPALKVLAEHM--QGYYFIT 320

Query: 240 RYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
            +P   +   A  Y       K F+L    +EL +    +        R + +      +
Sbjct: 321 DWPTESKPFYAMPYENRKEICKSFDLMKGWLELASGAQRIHKYDLLVERIKAQ-----GL 375

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             E++     +L      MP  +G  +G +RL+M +    NI E +  P  +
Sbjct: 376 DPESFG---FYLEAFRYGMPPHAGWGLGVERLLMAMLDLKNIREAVLFPRDR 424


>gi|123436445|ref|XP_001309183.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121890898|gb|EAX96253.1| hypothetical protein TVAG_205400 [Trichomonas vaginalis G3]
          Length = 253

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 5/209 (2%)

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
             ++  +      +  S  + I + E   +  N       D  +   R LL  + ++  +
Sbjct: 34  VQKEDGTIGQQEIDFSSPWQRIDMIEELEKQINFKFPPLEDTDEV--RELLEKKCKELDV 91

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
            V    T + +  +++ + +EP       T +  +P   S LA  +   P   +RFE++ 
Sbjct: 92  DVPPPMTVARMLDKMVGKFVEPLCV--NPTFMCNHPQVMSPLAKWHRTKPGIVERFEVFI 149

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMG 325
             +E  NA  EL  P+ QR  F  +++ K    +E  P D+ F   L   +P ++G   G
Sbjct: 150 NGLEYANAYTELNCPMVQRELFLDQLKAKAAKDDEAMPYDDTFCTALEYALPPTAGWGCG 209

Query: 326 FDRLVMLVTGANNINEVIWTPFSQSNQEE 354
            DRLVML+T   +I EV+  P  +    E
Sbjct: 210 VDRLVMLLTNQVSIREVLLFPLMKPAAGE 238


>gi|189913068|ref|YP_001964957.1| tRNA synthetase class II (D, K and N) [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|189913402|ref|YP_001964631.1| Putative lysyl-tRNA synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|167777744|gb|ABZ96044.1| tRNA synthetase class II (D, K and N) [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|167781470|gb|ABZ99767.1| Putative lysyl-tRNA synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 323

 Score =  186 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 99/330 (30%), Positives = 140/330 (42%), Gaps = 17/330 (5%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +  L+ R+ +  S+RE    N+F+E+D+ +L+   G E ++  F          R+  Y
Sbjct: 5   PKDTLIFRSKLLQSVREILTRNEFLEVDTPTLKPIVGMEPYLDPFEVRSPS---GREKGY 61

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L TSPE+S K+L+A G   IF  AH +R+GE     H  EF MLE Y        L    
Sbjct: 62  LITSPEYSLKQLMAMGLSHIFEIAHTYRSGEVGSPFHTKEFLMLELYAEGMDDVVLRHFI 121

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +R       +     Q              V E F  +                  L
Sbjct: 122 EKFLRELIFTVGEPTLHNQLSKPGWIRHFR---VQEVFLIHLGHGFERENLIQTITKLKL 178

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                +Q       +  + D+F  + +  IEP LG      L  YP   +ALA     + 
Sbjct: 179 TAETNEQL-----QNWQYEDLFFLVFLNCIEPKLG-EGIVFLYDYPPECAALA---RIED 229

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
              KRFE+Y   +EL NA  EL D  EQR RF  E   ++K+  E +PIDEDFL  L   
Sbjct: 230 GVAKRFEIYWDGLELANAFYELKDTNEQRERFTDEQALREKLGKEVFPIDEDFLTALGNG 289

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            P  SGI++G DRL + +   N + EV   
Sbjct: 290 FPNCSGISIGLDRLALKLFRKNTLAEVSPY 319


>gi|13541921|ref|NP_111609.1| aspartyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|62287583|sp|Q979P6|SYD_THEVO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|14325352|dbj|BAB60256.1| tRNA synthetase Asp [Thermoplasma volcanium GSS1]
          Length = 428

 Score =  186 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 115/346 (33%), Gaps = 54/346 (15%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            R+R         + I   +RE+     FIE+ +  +  +   E     F  +    D  
Sbjct: 124 LRKRDVSSIFNAESSILWGIREFLHSQGFIEVHTPKIV-AAATEGGADLFPVKYFENDA- 181

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
               YL  SP+   + L+++G EK+F    A+R  E     H  EFT ++   +   +  
Sbjct: 182 ----YLNQSPQLYKEILMSSGFEKVFEVGPAFRAEEHNTTRHLNEFTSIDIEMSFADHND 237

Query: 132 LMKDCMNI----IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
            M+   N     I        + +         P      IT  E               
Sbjct: 238 AMRILENAVKSGIENMINENGKDLQENGINISIPEIPFPRITYKEC-------------- 283

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                         ++ G+     + +S    RI+    +          +  +P+    
Sbjct: 284 ----------IKLLEKEGLEFQFGNDFSPEELRIIGRNFKD------FYFITEWPSSLRP 327

Query: 248 LA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                   DP  T  F+L    +E+ +    + DP     RF    ++K  I +      
Sbjct: 328 FYTMPNRDDPTITNSFDLQYREVEVTSGAQRVHDPDLLLKRF---NEKKLNIDS-----F 379

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           + ++      MP  +G  +G +RL M+V G NNI E    P  ++ 
Sbjct: 380 KFYIQAFKYGMPPHAGWGLGLERLTMIVLGLNNIRETTLFPRDRTR 425


>gi|119719540|ref|YP_920035.1| aspartyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524660|gb|ABL78032.1| aspartyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 421

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 53/338 (15%), Positives = 102/338 (30%), Gaps = 39/338 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
              R R   L R++I + +R +F E  F+E+ +  +    G E     F       D+  
Sbjct: 116 RLPRVRAAFLARSLIVNEIRSFFSERGFLEVHTPKIVK-AGAEGGATLFEV-----DYFG 169

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQL 132
              YL  SP+   + L+     ++F     +R  +     H  E   L+         + 
Sbjct: 170 VKAYLAQSPQLYKQMLMCGV-PRVFEIGPFFRAEKFSTTRHLNESWGLDVEMGFIKGMED 228

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + + ++ +         +                         R    ++   + +    
Sbjct: 229 VLEVLSQLVVHLSHKLNERLGD-------------------ALRGLGYNVIKPVTSVRVL 269

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                       G  +   + +     + L + +E          +  YP        + 
Sbjct: 270 TYDEALEVLNSLGFNLKWGEDFDPKAEKSLGDYLEEKGV--QAYFIVDYPWESKPFYIMK 327

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             D +    F+L    IE+ +           R     +   +K +  E +     +L  
Sbjct: 328 K-DEKRGYAFDLDIRGIEVASGGQREHRYEVLR-----QNLLEKGLNPEDF---SFYLEA 378

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
               MP   G  +G DRLVM   G  NI E +  P  +
Sbjct: 379 FKYGMPPHGGFGLGIDRLVMTFLGVQNIRETVLFPRDR 416


>gi|158523174|ref|YP_001531044.1| tRNA synthetase class II (D K and N) [Desulfococcus oleovorans
           Hxd3]
 gi|158512000|gb|ABW68967.1| tRNA synthetase class II (D K and N) [Desulfococcus oleovorans
           Hxd3]
          Length = 301

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 150/327 (45%), Gaps = 38/327 (11%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           L  R ++ +++R +F++  ++E+D+     S   E HI   +          +  +LQTS
Sbjct: 7   LKTRALVINAVRRFFLDRDYLEVDTPVRLPSLLPEAHIDPVA---------SETWFLQTS 57

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   K+LL+AG ++IF     +R  E+G  H PEF+MLEWYRA   Y  LM +   ++R
Sbjct: 58  PEQCMKRLLSAGHQRIFQICKTFRKAERGKKHLPEFSMLEWYRAGADYFDLMAETEALVR 117

Query: 142 CAAEVAN-QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
             AE         +Q    +   +   +TVA+AF RY                      Q
Sbjct: 118 FVAEQLGTGNSLFYQGAAIDLSPDWPAMTVAQAFERYT----------------DQTMEQ 161

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFT 259
           A + G            F   +   IEP LG++    L  YPA   +A A    ADP   
Sbjct: 162 AVKTGA-----------FDERIGCDIEPELGLDRPVFLYDYPAATGAAFARQKAADPTVV 210

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQS 319
           +RFELY   +ELCN   EL        RF++E   +        P  + FL+ +  MP +
Sbjct: 211 ERFELYIGGLELCNGFSELTGAAAYEERFQQEESRRTGRGLAPLPRPKQFLSDMDRMPDA 270

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
           +G A+G DRLVML   A  I++V+  P
Sbjct: 271 AGNALGIDRLVMLFCDATTIDDVVAFP 297


>gi|90409366|ref|ZP_01217451.1| lysyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90309532|gb|EAS37732.1| lysyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 215

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 8/209 (3%)

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
           V    +  +     +       +T+ E+   Y        +   +      L   A++  
Sbjct: 14  VLGSSVVKYGEEEFDFGKPFIRMTMKESILEY-----NDEIKAEELDSMEALQALAKRLN 68

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           I +  +     + + I  E  E    +   T +  YPA  S LA     DP  T RFE +
Sbjct: 69  IHLKDNWGAGKVLTEIFEETAEHK--LMQPTFITAYPAEVSPLARRSDNDPDVTDRFEFF 126

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
               EL N   EL D  +Q  RF  ++ +K    +E    D D++  L   +P ++G  +
Sbjct: 127 VGGRELANGFSELNDAQDQAQRFRDQVAQKDAGDDEAMFYDADYIVALEHGLPPTAGEGI 186

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G DRLVML T ++ I +V+  P  +   +
Sbjct: 187 GIDRLVMLFTDSHTIRDVLLFPHMRPQNK 215


>gi|315186436|gb|EFU20196.1| Lysine--tRNA ligase [Spirochaeta thermophila DSM 6578]
          Length = 324

 Score =  185 bits (470), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 102/334 (30%), Positives = 146/334 (43%), Gaps = 21/334 (6%)

Query: 16  YRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP 75
            R       R  + S LR +F  +  +E+D+  L      E HIR F+T         + 
Sbjct: 1   MRSLHIAHIRARLLSELRAFFRAHDHLEVDTPHLAPYLIPEAHIRPFTTTHHPLHDTPRA 60

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLMK 134
           L L  SPE   K LLA G   IF  +H +R+       H PEFTMLEWY    + +  + 
Sbjct: 61  LSLLPSPELWMKHLLAQGYGDIFQISHVFRDAEPPSPRHSPEFTMLEWYTTGSTADDQIS 120

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
               +    A   +    S              +T+ EAF RYA   L           R
Sbjct: 121 LTEELFATLAHSLDAPHLS---------PPFHRLTMEEAFTRYAGFSLEAHHS------R 165

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
             L   A + G+ V+  ++  D+F RI +  +EP+L I+   +L  YP     LA   P 
Sbjct: 166 EALASHATRLGLEVSPRESAEDLFHRIFLTFVEPHLPIDRPLVLTHYPTLVPTLARPIPD 225

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
            P + +R+ELYA  +EL N   E  DP+      E E+  +      T P   DF A   
Sbjct: 226 TP-WRERWELYAGGMELANCYTEETDPVRVERFMEGELTRR---GTSTPPPPPDFPATCA 281

Query: 315 EMP-QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +P  +SG+A+G DRL+M +TG  +I  VI+ P 
Sbjct: 282 RIPHPTSGVALGVDRLLMYLTGEKDIRGVIFFPL 315


>gi|294881737|ref|XP_002769472.1| Lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239872931|gb|EER02190.1| Lysyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 388

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 94/238 (39%), Gaps = 13/238 (5%)

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------CNPFSEPEYITVAEA 173
           +Y A+  Y  LM     +I    +          +           +     + +++ E 
Sbjct: 142 FYMAYADYNDLMNMTEEMISGMVKSIFGTYKVTFHPEGPEGPAKEIDFSPPWKRVSMVEE 201

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R + + L    D   +  R  L   A +  +      T + +  ++    IE    I 
Sbjct: 202 IERQSGVSLN--HDFAAEEARQQLDELATKFDVECPAPRTSARLLDKLCGFFIEDK--IV 257

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             T +  +P   S LA  + + P  T+RFE +    E+CNA  EL DP++Q   F  + Q
Sbjct: 258 SPTFVTEHPQIMSPLAKWHRSKPGLTERFEGFVMGKEICNAYTELNDPVKQLACFTAQAQ 317

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            K    +E   +D  F+  L   +P + G  +G DRL M +T   NI EVI  P  + 
Sbjct: 318 AKAAGDDEACDVDNGFVTALEYGLPPTGGWGLGVDRLCMFLTDNINIKEVILYPAMKP 375


>gi|270158829|ref|ZP_06187486.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289166378|ref|YP_003456516.1| lysyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269990854|gb|EEZ97108.1| lysyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288859551|emb|CBJ13516.1| lysyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 313

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 78/345 (22%), Positives = 134/345 (38%), Gaps = 37/345 (10%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           L +R  +   +R +F E  + E+++  +      + ++          
Sbjct: 2   WKPSASI---ELLRQRAELLKKIRYFFTERGYWEVETPIMARYGTTDVYLSNIEALFR-- 56

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
               +  YLQTSPE+  K+LLAAG   IF  A  +R+ E G  H PEFT+LEWY+    +
Sbjct: 57  ---GETYYLQTSPEYHMKRLLAAGSGPIFQIARVFRDDELGRWHNPEFTLLEWYQLGIDH 113

Query: 130 EQLMKDCMNIIRCAA--EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
             L+ +    ++         +K +    +                    A +D    + 
Sbjct: 114 HTLIGEMDLFLQMILESRPMLKKTYQHAFLEACHIDPFC-----------ATVDELRQVL 162

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPES 246
                D+ L   +  +                 ++   +EP     +    L  +P+ ++
Sbjct: 163 VYFNLDKVLPANEEDK-----------DQYLFLLMSHVVEPFLAKESVPVALYDFPSSQA 211

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           ALA I        +RFE+Y   +EL N   EL D   Q+ RF  +   + +        D
Sbjct: 212 ALAKINN---GVAERFEVYYQGVELANGFHELTDAAAQKKRFVLDQHLRNQKGLRAAEAD 268

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +  L  L   +P  SG+A+G DRL+ L    + I +VI   F ++
Sbjct: 269 QYLLNALEHGLPSCSGVALGVDRLLALALKKSEIAQVISFDFLRA 313


>gi|307718950|ref|YP_003874482.1| lysyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306532675|gb|ADN02209.1| lysyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 350

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 102/334 (30%), Positives = 146/334 (43%), Gaps = 21/334 (6%)

Query: 16  YRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP 75
            R       R  + S LR +F  +  +E+D+  L      E HIR F+T         + 
Sbjct: 27  MRSLHIARIRARLLSELRAFFRAHDHLEVDTPHLAPYLIPEAHIRPFTTTHHPLHGTPRT 86

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLMK 134
           L L  SPE   K LLA G   IF  +H +R+       H PEFTMLEWY    + +  + 
Sbjct: 87  LSLLPSPELWMKHLLAQGYGDIFQISHVFRDAEPPSPRHSPEFTMLEWYTTDSTADDQIS 146

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
               +    A   +    S              +T+ EAF RYA   L            
Sbjct: 147 LTEELFATLAHSLDAPHLS---------PPFHRLTMEEAFTRYAGFSLEAHHT------L 191

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
             L   A + G+ V+  ++  D+F RI +  +EP+L ++   +L  YP     LA   P 
Sbjct: 192 EALASHATRLGLDVSPHESAEDLFHRIFLTFVEPHLPVDRPLVLTHYPTLVPTLARPIPD 251

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
            P + +R+ELYA  +EL N   E  DP    H  E E+  +      T P   DF A  T
Sbjct: 252 TP-WRERWELYAGGMELANCYTEETDPDRVEHFMEGELTRR---GTPTPPPPPDFPATCT 307

Query: 315 EMP-QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +P  +SG+A+G DRL+M +TG  +I  VI+ P 
Sbjct: 308 RIPHPTSGVALGVDRLLMYITGEKDIRGVIFFPL 341


>gi|119505507|ref|ZP_01627579.1| Truncated, possibly inactive, lysyl-tRNA synthetase (class II)
           [marine gamma proteobacterium HTCC2080]
 gi|119458616|gb|EAW39719.1| Truncated, possibly inactive, lysyl-tRNA synthetase (class II)
           [marine gamma proteobacterium HTCC2080]
          Length = 316

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 86/344 (25%), Positives = 142/344 (41%), Gaps = 34/344 (9%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W    +        +R  + + LR YF + + +E+++  L  +  ++  +  F       
Sbjct: 4   WRPGAN---NAIQRQRAALLADLRNYFAQRRVMEVETPLLCRAGVSDPALENFEVPSG-- 58

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
              ++  +LQTSPE++ K+LLAAG   IF    A+R  EQG  H PE+T+LEWYR    +
Sbjct: 59  ---QEMRFLQTSPEYAMKRLLAAGSGDIFQICKAFRREEQGVRHNPEYTLLEWYRLGFDH 115

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            QL ++   ++    E    +++S+Q                        I         
Sbjct: 116 YQLAREVGELVAAVLERPGWQVWSWQ-----------------------GIFQEVLGAGA 152

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
               R  L   A      +  D     +   ++   +EP +       +  YP  ++ALA
Sbjct: 153 HCASREDLEELALGNVGDIPLDLDRDGLLDLLMSHCVEPAISGWGIVFIVDYPPSQAALA 212

Query: 250 NI--YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                 +      RFE Y   IEL N   E  D  E R RF  +   ++         DE
Sbjct: 213 RQILDASGELHGARFECYVDGIELANGYWECGDAAELRARFTSDNLLRRTRGQPERIADE 272

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             L  L   +P  +G+A+G DRL+ L +GA N++ V+   +S+S
Sbjct: 273 YLLEALTAGLPACAGVALGVDRLLALKSGAKNLDAVLSFGWSRS 316


>gi|282891825|ref|ZP_06300305.1| hypothetical protein pah_c198o010 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498258|gb|EFB40597.1| hypothetical protein pah_c198o010 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 314

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 99/334 (29%), Positives = 149/334 (44%), Gaps = 33/334 (9%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R  + S  R++F     +E+D   +      + HI     +    +      YL 
Sbjct: 5   ALLKDRAQMLSRARQFFSHRGVLEVDCPMISRYAAVDEHIDLIPVQYAGANR----RYLH 60

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           +SPE+  K+L+  G   I+  AH +R+GE G  H PEF M EWYR   S+ +++ + ++ 
Sbjct: 61  SSPEYGMKRLIVDGMGDIYQLAHVFRDGEYGRKHNPEFMMAEWYRLGFSFNEMILETVDF 120

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +R                          +T  EAF  +A +D         Q     L  
Sbjct: 121 VRLFLGDI----------------PFTSMTYREAFQNFAGLDY-------HQATTKELRQ 157

Query: 200 QAQQAGIRVAH---DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
               AGI   H    +    + + IL   IEP LG N   +L  YPA ++ALA     D 
Sbjct: 158 YIHDAGIDQIHSIAGEDKDGLLNVILGLVIEPQLGRNGLFVLSHYPASQAALAQTVTHDD 217

Query: 257 RF-TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK-KKIYNETYPIDEDFLACLT 314
               +RFE+Y   +EL N   EL +  EQR RF +  + + +++  E  PIDE FLA L 
Sbjct: 218 EHVAERFEVYFEGVELANGYHELANAQEQRQRFIEANKHREERLGKEPLPIDEHFLAALE 277

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +P   G+A+GFDRL+ML     ++ EVI   +
Sbjct: 278 KGLPNCCGVAVGFDRLMMLRHHCLSLAEVIPFDW 311


>gi|284052903|ref|ZP_06383113.1| lysyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 228

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 12/192 (6%)

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRIL 222
               T+ EA      +D        D  +      +A+  G+R+          +   + 
Sbjct: 45  WRVKTMVEAVRDETGLDF-------DTLEFSEAKSKAEAIGVRLTDLNTQNLGYLLYAVF 97

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
            +K+E    +   T +  +P   S LA  + + P F +RFEL+    E  N   EL DP+
Sbjct: 98  DQKVEST--LIEPTFIIDFPVEVSPLAKRHRSKPGFVERFELFIHGTEYSNGFSELNDPV 155

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           +QR RFE+++ +K+   +E +P+DEDF+  L+  MP   G+ +G DRLVM +T   +I +
Sbjct: 156 DQRQRFEEQLAQKQAGDDEAHPMDEDFIQALSLGMPNCGGMGIGVDRLVMFLTDTQSIRD 215

Query: 342 VIWTPFSQSNQE 353
            I  P  +S ++
Sbjct: 216 AILFPTMRSFKD 227


>gi|11498525|ref|NP_069753.1| aspartyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122883|sp|O29342|SYD_ARCFU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2649677|gb|AAB90318.1| aspartyl-tRNA synthetase (aspS) [Archaeoglobus fulgidus DSM 4304]
          Length = 430

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/343 (19%), Positives = 121/343 (35%), Gaps = 47/343 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              R +     R+ +  S+RE+  E  FIE+ +  +  +   G         TEL    +
Sbjct: 127 RRPRVQAIFRIRHQVMQSVREFLSEEGFIEVHTPKIVSTATEGG--------TELFPISY 178

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + L+AAG EK+F     +R  E     H  E   ++   +   + 
Sbjct: 179 FEKEAFLNQSPQLYKQVLMAAGFEKVFEIGPIFRAEEHNTTRHLNEAISIDIEMSFTDHN 238

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M     +++   E                         AE   RY    L  +L+ P+
Sbjct: 239 GVMDVLERLVQRVYEDV-----------------------AEKCERYLGW-LEVSLEIPE 274

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP-ESALA 249
            P   + Y +A++   R   +  W +  S   ++ +   +G      +  +P   +   A
Sbjct: 275 LPFPRITYDEAREIAARKGEEIPWGEDLSTNALKLVGEEMG--GLYFITDWPTESKPFYA 332

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
             Y   P  +K F+L    +EL +    +                K K           +
Sbjct: 333 MPYEDRPEISKSFDLMHGWLELSSGAQRIHLYDMLVE------SIKAKGMEPESF--GFY 384

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           L      MP  +G  +G +RL+M + G  N+ E +  P  +  
Sbjct: 385 LEAFRYGMPPHAGWGLGAERLIMSMLGLKNVREAVLFPRDRHR 427


>gi|14590860|ref|NP_142932.1| aspartyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|6647821|sp|O58776|SYD_PYRHO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3257434|dbj|BAA30117.1| 438aa long hypothetical aspartyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 438

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 61/365 (16%), Positives = 113/365 (30%), Gaps = 53/365 (14%)

Query: 3   QIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM- 47
            +P  P        D     R               R+ +  ++RE+F    FIEI +  
Sbjct: 104 PLPLDPTGKVKAELDTRLDNRFMDLRNPKVMAIFKIRSSVFRAVREFFYSEGFIEIHTPK 163

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +    T +           +  +  +L  SP+   + ++A G +K+F  A  +R  
Sbjct: 164 IIATATEGGTELFPLK-------YFERDAFLAQSPQLYKQMMMATGLDKVFEIAPIFRAE 216

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  E   ++   A    E  + D +  +        ++                
Sbjct: 217 EHNTTRHLNEAWSIDAEMAFIENEGEVMDLLERLISYVINYVREH--------------- 261

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                E   +    +L        +             G  +   +       ++L + +
Sbjct: 262 ----NEKELKTLEFELNEPKRPFPRITYDKALEILSDLGKEIPWGEDIDTEGEKLLGKYM 317

Query: 227 EPNLGINCCTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
             N G +    + RYP+  +      Y   P   + F+L    +E+ +            
Sbjct: 318 AENEGADL-YFIYRYPSEAKPFYIMKYDEKPEVCRAFDLEYRGVEISSGGQREHRHDVLL 376

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
                  Q K+K  N      E +L      MP   G  +G +RL+M +    NI EVI 
Sbjct: 377 E------QIKEKGLNPKSF--EFYLKAFEYGMPPHGGFGLGAERLIMRMLDIGNIREVIL 428

Query: 345 TPFSQ 349
            P  +
Sbjct: 429 FPRDR 433


>gi|296109648|ref|YP_003616597.1| aspartyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434462|gb|ADG13633.1| aspartyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 431

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 120/342 (35%), Gaps = 47/342 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              R +     R+ +  S+RE F    FIE+++  L  S   G         TEL    +
Sbjct: 130 RKPRVQAIFKIRHEMLKSVRETFYSEGFIEVNTPKLVASATEGG--------TELFPISY 181

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + L+A+G +++F  A  +R  E     H  E T ++   A    +
Sbjct: 182 FEKEAFLGQSPQLYKQMLMASGLDRVFEIAPIFRAEEHNTRRHLNEATSIDIEMAFADDK 241

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
             +K    ++  A     +                      E      N  L     + D
Sbjct: 242 DAIKMLEKVVYNACVSVYE--------------------NREKELNLLNHKLEVPPKSFD 281

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           +         A++ G+ +     W +  SR   + I   +G      +  +P        
Sbjct: 282 KITYDEAIEIAKRRGVEIE----WGEDLSREAEKAIGEEMG--GFYFIVDWPTEIRPFYT 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
           + P D ++ K F+L   ++E+ +    +          +      K +  + +     +L
Sbjct: 336 M-PKDDKYCKAFDLMYKDLEISSGAQRIHIYDMLVESIKN-----KGLNPDAFTY---YL 386

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                 MP  +G  +G DR  M++TG  NI E +  P  +  
Sbjct: 387 EAFKYGMPPHAGWGLGADRFTMVLTGQENIRECVLFPRDRHR 428


>gi|14521164|ref|NP_126639.1| aspartyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|13878787|sp|Q9V036|SYD_PYRAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|5458382|emb|CAB49870.1| aspS aspartyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 438

 Score =  182 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 56/340 (16%), Positives = 113/340 (33%), Gaps = 39/340 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
            + R       R+ +  + RE+F +  FIEI +   +  +    T +           + 
Sbjct: 129 RNPRVMSIFKIRSSVFRATREFFYKEGFIEIHTPKIIATATEGGTELFPLK-------YF 181

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
               +L  SP+   + +++ G +K+F     +R  E     H  E   ++   A    E+
Sbjct: 182 ENDAFLAQSPQLYKQMMMSTGLDKVFEIGPIFRAEEHNTTRHLNEAWSIDAEMAFIESEE 241

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            + D +  +        ++                     E   +    +L        +
Sbjct: 242 EVMDLLERLILYVINYVREN-------------------NEKELKILEFELNEPKKPFPR 282

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                        G  +   +       ++L + +  N G      + RYP+       +
Sbjct: 283 ITYDEALEILSDLGKEIPWGEDIDTEGEKLLGKYMLENEGAEL-YFIYRYPSEAKPFYIM 341

Query: 252 YPAD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
              D P   K F+L    +E+ +                ++++EK  +  E++   E +L
Sbjct: 342 KYEDKPEVCKAFDLEYRGVEISSGGQREHRHDI----LVEQIREK-GLNPESF---EFYL 393

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                 MP   G  +G +RL+M +    NI EVI  P  +
Sbjct: 394 RAFEYGMPPHGGFGLGAERLIMRMLDIGNIREVILFPRDR 433


>gi|331005533|ref|ZP_08328908.1| Lysyl-tRNA synthetase-like protein [gamma proteobacterium IMCC1989]
 gi|330420653|gb|EGG94944.1| Lysyl-tRNA synthetase-like protein [gamma proteobacterium IMCC1989]
          Length = 314

 Score =  182 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 95/343 (27%), Positives = 152/343 (44%), Gaps = 38/343 (11%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P L +R  +   +RE+F+  Q +E+D   L      +  I +  T++   
Sbjct: 3   WQPSASL---PALQQRAKLYQIVREFFLAQQVLEVDVPVLSEYATVDPFIDSLKTKV--- 56

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
             + +  YLQTSPEF  K+LLAA +  ++    A+R GEQG  H+PEFTMLEWYR   + 
Sbjct: 57  --LGRTEYLQTSPEFFLKRLLAAYQHDVYYLGKAFRQGEQGRRHRPEFTMLEWYRIGWTE 114

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           +QL+ +  N++                            T  E F ++ +ID        
Sbjct: 115 QQLIGEVNNLLALFFPE----------------KPCSAFTYREVFQQHLSIDPHVA---- 154

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSD---IFSRILIEKIEPNLGINCCTILDRYPAPES 246
               + LL     +    +       D   +   +    IEP L +     +  YPA ++
Sbjct: 155 --TAKVLLQCALSELNGEIDEGLMAGDKNTLLDLLFTHCIEPRLPLG-VVAISDYPASQA 211

Query: 247 ALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           ALA +          KRFE+Y   IEL N   EL +  EQ+ RFE+++  ++       P
Sbjct: 212 ALAKVAEDAQGQLVAKRFEIYVDKIELANGYWELNEGAEQQARFEQDVDYRQAHNLPVLP 271

Query: 305 IDEDFLACL-TE-MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            D+  +  L    MP  +G+A+G DRL+M   G N++++V+  
Sbjct: 272 YDQSLVEALSEGNMPDCAGVALGIDRLLMCWLGTNDMSDVVSF 314


>gi|294495524|ref|YP_003542017.1| aspartyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666523|gb|ADE36372.1| aspartyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 443

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 54/343 (15%), Positives = 110/343 (32%), Gaps = 45/343 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
              R       R+ +  ++R Y   + F+E  S   +  +    T +   +       + 
Sbjct: 134 RRSRTNAIFRIRHEVLHAVRNYLANDGFLETSSPKVVATATEGGTALFPIT-------YF 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L++ G +++F     +R  E     H  E T ++   +   +  
Sbjct: 187 DREAFLNQSPQLFKQILMSGGMDRVFEIGPIFRAEEHDTRRHLNEATSIDIEASFVDHFD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   N++                           I           I+L        +
Sbjct: 247 VMEILENMVEYVYNQV--------------------IENVPDALEVLGIELKVPKTPFLK 286

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN---CCTILDRYPAPESAL 248
                        G     +  W D  S +    I  ++          +  +P      
Sbjct: 287 LTYQEAIDIVNSHG---EEELKWGDDLSTLSEHTIGEHVFQETGEEHYFIIDWPTEIKPF 343

Query: 249 A-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
               Y   P F+K F++    +EL +    +  P   ++R   +      +  E +   +
Sbjct: 344 YAMPYEEKPEFSKSFDMMHRTMELSSGAQRIHVPEMLKNRIADQ-----GLDPEGF---D 395

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +L      MP  SG  +G +R VM + G  NI +V+  P  +
Sbjct: 396 FYLRAFSYGMPPHSGWGLGCERFVMTMLGVENIRDVVLFPRDR 438


>gi|297620471|ref|YP_003708608.1| putative lysyl-tRNA synthetase-like protein [Waddlia chondrophila
           WSU 86-1044]
 gi|297375772|gb|ADI37602.1| putative lysyl-tRNA synthetase-like protein [Waddlia chondrophila
           WSU 86-1044]
          Length = 314

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 89/328 (27%), Positives = 146/328 (44%), Gaps = 26/328 (7%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
            L  R+ + +  RE+F+    +E+D  ++  S   + HI             +K  YL +
Sbjct: 8   ILKDRSEMLAKAREFFLRRNVLEVDCPAMSKSASIDVHIDL----YRCYGASQKTFYLHS 63

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE+  KKLLA G   I+   H +R+ E    H PEFTM EWYR    +  ++++ +  I
Sbjct: 64  SPEYGMKKLLAEGIGDIYQLGHVFRDNEYSMRHNPEFTMAEWYRVKVPFSAIIEETVEFI 123

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +                          I+  EAF +YA +D   + ++          + 
Sbjct: 124 QEFIGKL----------------PVTKISYREAFKKYAGLDYLKSSEDDLLQYLETRGID 167

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA-LANIYPADPRFT 259
             Q       D     + + IL   IEP LG N   +L  +PA ++A        +   +
Sbjct: 168 PYQNIEEEGKDA----LLNIILGVVIEPQLGKNDICVLQYFPATQAALAKTKKRGEEEVS 223

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           +RFE++   +EL N   EL D  EQ  R       ++++  +T PID+ F+  L   +P 
Sbjct: 224 ERFEVFHKGMELANGYHELTDSEEQYERLLITNSTRERLSKDTLPIDDSFIKALERGLPD 283

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+++GFDRL+ML    ++I +VI  P
Sbjct: 284 CCGVSVGFDRLMMLRHQMDDIADVIPLP 311


>gi|110835308|ref|YP_694167.1| lysyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110648419|emb|CAL17895.1| lysyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 311

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 88/348 (25%), Positives = 145/348 (41%), Gaps = 47/348 (13%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           +  R  + S++R +F   Q +E+D+  L     ++ HI+  +      
Sbjct: 4   WQPTASL---QAIKARAELLSTVRAFFDARQVLEVDTPQLARYGVSDPHIQCIAVPGYG- 59

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
                  YLQ+SPE+  K+LLAAG   I+    A+R GE G  H PEFTMLEWYR   S 
Sbjct: 60  -------YLQSSPEYHMKRLLAAGSGPIYQLCKAFREGEAGGRHNPEFTMLEWYRPGFSL 112

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            QL+ +C+ +                     P    +     + F     +D       P
Sbjct: 113 NQLVSECLALFA----------------ELFPGIRAKKYPFRDLFKNITGLD-------P 149

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
              D   L   A   G     + T +     ++  ++E  L     +++  +P   +ALA
Sbjct: 150 LTVDDAELIHYAVFHGAPTGLNKTAA--VDYLMATQVETALPAEQLSVVTDFPGWAAALA 207

Query: 250 NIYPADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
             +         KRFE+Y   +EL N   EL D  EQ  RF+++   + +        D 
Sbjct: 208 QTHKDKDGAIVAKRFEVYYRGLELANGYQELTDAQEQSQRFQRDNALRLEQGLPPMAPDA 267

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVML----VTGANNINEVIWTPFSQS 350
             L  + + +P+ SG+A+G +RL+M     +T    I++V+  P  ++
Sbjct: 268 YLLDAMTSGLPECSGVAVGVERLLMAQQPPLT----IDQVLTFPHPRA 311


>gi|315230515|ref|YP_004070951.1| aspartyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183543|gb|ADT83728.1| aspartyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 438

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 59/366 (16%), Positives = 120/366 (32%), Gaps = 51/366 (13%)

Query: 3   QIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM- 47
            +P  P        D     R               R+ +  ++RE+F    FIEI +  
Sbjct: 104 PLPLDPTGKVKAELDTRLDNRFIDLRKPEVMAIFKIRSNVFKAVREFFYNEGFIEIHTPK 163

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +           TEL    +  K  +L  SP+   + ++A+G +++F  A  +R  
Sbjct: 164 IIATATEGG-------TELFPMKYFEKDAFLAQSPQLYKQIMMASGLDRVFEIAPIFRAE 216

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  E   ++   A    E  +   +  +        ++                
Sbjct: 217 EHNTTRHLNEAWSIDAEIAFIEDEDEVMQVLERLVAYTINYVREH--------------- 261

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                E   +  N +L        +          +  G  +   +       ++L + I
Sbjct: 262 ----NEKELKILNFELEEPKLPFRRITYTEALEILKDLGKNIPWGEDIDTEGEKLLGQYI 317

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           + N   +   I       +      Y  +P+ ++ F+L    +E+ +          +  
Sbjct: 318 KENYDEDLYFIYQYPSEAKPFYIMKYDDNPKISRAFDLEYRGVEITSGGQREH----RYE 373

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             ++++ EK  +  E++   E +L      MP   G  +G +RL+  +    NI EVI  
Sbjct: 374 ILKQQIAEK-GLNVESF---EFYLKAFRYGMPPHGGFGLGAERLIKQMLNLGNIREVILF 429

Query: 346 PFSQSN 351
           P  +  
Sbjct: 430 PRDRKR 435


>gi|15640024|ref|NP_219477.1| lysyl-tRNA synthetase (lysS-2) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189026263|ref|YP_001934035.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|3323370|gb|AAC26594.1| lysyl-tRNA synthetase (lysS-2) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018838|gb|ACD71456.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291060401|gb|ADD73136.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 351

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 90/338 (26%), Positives = 144/338 (42%), Gaps = 23/338 (6%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI--IQDHIRKPLYLQT 80
           L R     ++R++F+E+ +IE+D+ +L  +   E  +  F TE    +     + LYL  
Sbjct: 7   LFRAQCLRAVRDFFLEHHYIELDTPALARALVPERCLEVFQTEYFTSVHAKDTQKLYLVP 66

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SPE   K L+A  +   F  +  +RN    G LH+PEFTM+E+Y  +  Y+  +     +
Sbjct: 67  SPEVFLKPLIAQLQRSAFQISKCYRNGESMGALHRPEFTMVEYYTVYADYKTSLDVSSKL 126

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNPDQPDRHLL 197
            R   E       +         +  EY+TV EAF RYA   +   +++    Q      
Sbjct: 127 FRFVVEQVQSHPLADPYSCACFCAPFEYVTVEEAFLRYAGFSLSHASSVQTLAQEVLRSG 186

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN--LGINCCTILDRYPAPESALANIYPAD 255
                +AG+      +W D++  +L+  +EP      + C +L  YP   S LA  +   
Sbjct: 187 IDLGARAGVDYT-QWSWDDLYELLLVHIVEPKLRSIKDRCVVLYDYPIQISCLAQEHTGR 245

Query: 256 PRFT---------------KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
                              +R+ELY   +EL N   E  D         +E   K+    
Sbjct: 246 SGIQSTSPNKGDAPHWVVKERWELYVRGVELINCYTEQRDAKHVTRYCREEQTAKQGSAR 305

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANN 338
             +P+ E F      MP  SG A+GFDRLV L+ G ++
Sbjct: 306 VVHPVPEGFAHACARMPPCSGAALGFDRLVALLAGRHS 343


>gi|289192215|ref|YP_003458156.1| aspartyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288938665|gb|ADC69420.1| aspartyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 434

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 58/340 (17%), Positives = 114/340 (33%), Gaps = 45/340 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              + +     R+ +  S+R       FIE+++  L  S            TEL    + 
Sbjct: 131 RRPKVQAIFKIRSEMLKSVRNTLYNEGFIEVNTPKLVASCTEGG-------TELFPISYF 183

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L+A G +++F  A  +R  E     H  E T ++   A    + 
Sbjct: 184 EREAFLGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEATSIDIEMAFADDKD 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            M     ++  A     +                      +       I+     +  D+
Sbjct: 244 AMDILEKVVYNAFVDVYE--------------------NRKKEIETLGIEFELPPEKFDR 283

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                    A   G+ ++    W +  SR   + I   +G      +  +P+        
Sbjct: 284 ITYDEAIDIANAKGVEIS----WGEDLSREAEKAIGEEMG--GLYFITDWPSEIRPFYTM 337

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
            +  +P   K F+L   ++E+ +    +            E  +KK +  + +     +L
Sbjct: 338 PHEDNPEICKAFDLMYKDLEISSGAQRIHLYD-----LLVENIKKKGLNPDGFTY---YL 389

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                 MP  +G  +G DR  M++T   NI E +  P  +
Sbjct: 390 EAFKYGMPPHAGWGLGADRFTMVLTQQENIRECVLFPRDR 429


>gi|148643296|ref|YP_001273809.1| aspartyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|148552313|gb|ABQ87441.1| aspartyl-tRNA synthetase, AspS [Methanobrevibacter smithii ATCC
           35061]
          Length = 439

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 72/370 (19%), Positives = 129/370 (34%), Gaps = 63/370 (17%)

Query: 2   HQIPSQPWWNR-----DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDS 46
             +P  P  ++     D     R               +N +  ++R++F EN F+EI++
Sbjct: 110 QPLPMDP-TDKVKAEIDTRLDSRFIDLRRDNVSAIFKIKNRMFHTIRDFFYENGFMEINT 168

Query: 47  MSLQYSP--GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
             L  S   G         TEL    +  K  +L  SP+   + ++++G +K+F     +
Sbjct: 169 PKLVASATEGG--------TELFPITYFEKEAFLGQSPQLYKQMMMSSGMDKVFEIGQIF 220

Query: 105 RNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R  E     H  E   ++   +      +MK   N++       N+      N+  +   
Sbjct: 221 RAEEHDTLRHLNEAVSIDAEASFMDDIDVMKILNNMLEQVIIDINEDCKEELNILEH--- 277

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
                                 +  PD P   + Y +A         + +W +  SR   
Sbjct: 278 ---------------------EMPVPDGPFPVVTYDEAVDIVNSRDVEMSWGEDLSRAGE 316

Query: 224 EKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPI 282
           + +   +G      L  +P+            DP     F+L   N+EL +    +    
Sbjct: 317 KALGDVMG--GFYFLTEWPSEIKPFYVMPNSKDPTKAHAFDLMYNNLELSSGATRVH--- 371

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
            Q     K+++EK    N        +L      MP  +G  +G DRL M++TG  NI E
Sbjct: 372 -QYDVLVKQIEEK--GLNVASF--GSYLKAFEYGMPPHAGWGVGADRLAMVLTGVENIRE 426

Query: 342 VIWTPFSQSN 351
            +  P  +  
Sbjct: 427 TVLFPRDRHR 436


>gi|20094147|ref|NP_613994.1| aspartyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|22257050|sp|Q8TXG4|SYD_METKA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19887157|gb|AAM01924.1| Aspartyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 431

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 56/341 (16%), Positives = 109/341 (31%), Gaps = 44/341 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                +     RN++ +++RE+  E  FIE+ +   +  +    T +           + 
Sbjct: 129 RREEPQAIFKIRNVVTTAIREFLEERGFIEVHTPKIIASATEGGTELFPVV-------YF 181

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +  YL  SP+   + L+AAG E+++     +R  E     H  E   ++   +    E+
Sbjct: 182 ERDAYLAQSPQLYKQMLMAAGFERVYEIGPIFRAEEHNTRRHLNEAISVDIEMSFIESEE 241

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +   +  +        ++                     E      + +L       ++
Sbjct: 242 DVMRVLEELLAHVFRKVREEC-------------------EKELEALDRELPELETPFER 282

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                      + GI V   +       R L E  E          +  +P        +
Sbjct: 283 ITYEETLDLLSEHGIEVEWGEDLPTEAERKLGEIFEE------PFFITEWPRETRPFYTM 336

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              D   T  F+L    +EL +             + E++      +  E +     +L 
Sbjct: 337 -AKDDEVTTAFDLMYQGLELASGAQREHRYDVLVRQIEEQ-----GLSPEDF---RHYLE 387

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                MP   G  +G +R +M +TGA NI EV   P  +  
Sbjct: 388 AFKYGMPPHGGWGLGLERTLMTITGAENIREVTLFPRDRKR 428


>gi|313635100|gb|EFS01445.1| lysyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 166

 Score =  182 bits (461), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 3/167 (1%)

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +D  +       +  A++  + V    T+  I +      +E    +   T +  +P   
Sbjct: 1   VDFWNVTSDEEAHQLAKEHNVPVTKHMTYGHILNEFFETFVEEK--LIQPTFVYGHPVEI 58

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           S LA     D RFT RFEL+    E  NA  EL DPI+QR RFE +M+E+++  +E + +
Sbjct: 59  SPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGM 118

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           D DFL  L   +P + G+ +G DRLVML+T A +I +++  P  +  
Sbjct: 119 DADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKHR 165


>gi|16081991|ref|NP_394405.1| aspartyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|13878780|sp|Q9HJM1|SYD_THEAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|10640261|emb|CAC12075.1| aspartyl-tRNA synthetase related protein [Thermoplasma acidophilum]
          Length = 428

 Score =  182 bits (461), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 64/343 (18%), Positives = 119/343 (34%), Gaps = 48/343 (13%)

Query: 16  YRRR---PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDH 71
            R+R         + +   +R+Y    +FIE+ +   +  +    + +           +
Sbjct: 124 LRKRNISAIFRIESALLWGIRQYLHSQKFIEVHTPKIVAAATEGGSDLFPVR-------Y 176

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  YL  SP+   + L++AG +++F    A+R  E     H  EFT ++   +   + 
Sbjct: 177 FEKDAYLNQSPQLYKEVLMSAGFDRVFEVGPAFRAEEHNTTRHLNEFTSIDIEMSFADHN 236

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
             M    N IR   E A ++                             I +        
Sbjct: 237 DAMAMLENAIRSGIENAVRENAEDF--------------------ESLGISISVPETPFP 276

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA- 249
           +          Q+ GI     D +S    R +  +       +    +  +P+       
Sbjct: 277 RITYEQCIDLLQKDGIDFTFGDDFSPDQLRTIGSR------FSGFYFITEWPSSVRPFYT 330

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                DPR T  F+L    IE+ +    + DP     RF +     KK+  +++     +
Sbjct: 331 MPKSEDPRLTNSFDLQYREIEVTSGAQRVHDPKMLIQRFNE-----KKLDVKSFQ---FY 382

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           +      MP  +G  +G +RL M++ G NNI E    P  ++ 
Sbjct: 383 VDAFKYGMPPHAGWGLGLERLTMILLGLNNIRETTLFPRDRTR 425


>gi|254166888|ref|ZP_04873742.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596142|ref|YP_003482838.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624498|gb|EDY37059.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533929|gb|ADD08276.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 428

 Score =  182 bits (461), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 65/343 (18%), Positives = 120/343 (34%), Gaps = 51/343 (14%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQD 70
            R+R        R+ I   +REY +   F+E+ +  +  +   G         TEL    
Sbjct: 127 LRKREVLAVFEIRSTILQGIREYLLNQNFVEVHTPKIVATATEGG--------TELFPVK 178

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +  K  YL  SP+   + L+AAG +++   A A+R  E     H  EF  ++   +    
Sbjct: 179 YFEKDAYLNQSPQLYKQVLMAAGLDRVLEVAPAFRAEEHNTTRHLNEFISIDIEMSFADE 238

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E  M      I  A +   ++      +    +                        + P
Sbjct: 239 EDAMYMLEGSIVNAIKKLKEERKEEMEILGMNW------------------------EVP 274

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
             P + + Y +A +   +   D  W + FS   ++ +     +     + R+P       
Sbjct: 275 SLPFKRITYDEALEIVRKKGIDMEWGEDFSTEALKALGSE--LQEFYFITRWPMEIKPFY 332

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
            +   D +++  F+L     E+ +                     + K  N      E +
Sbjct: 333 VL--PDGKYSHAFDLMYGEREITSGAQRNHVYESLVEV------MRSKGLNPENF--EYY 382

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           L      MP  +G  +G +RLVM++TG  NI E +  P  ++ 
Sbjct: 383 LRAFRYGMPPHAGWGLGLERLVMIITGVKNIRECVIFPRDRTR 425


>gi|261403378|ref|YP_003247602.1| aspartyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370371|gb|ACX73120.1| aspartyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 434

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/340 (17%), Positives = 114/340 (33%), Gaps = 45/340 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              + +     R+ +  S+R       FIE+++  L  S            TEL    + 
Sbjct: 131 RRPKVQAVFKIRSEMLKSVRNTLYNEGFIEVNTPKLVASCTEGG-------TELFPISYF 183

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            K  +L  SP+   + L+A+G +++F  A  +R  E     H  E T ++   A    + 
Sbjct: 184 EKEAFLGQSPQLYKQMLMASGLDRVFEIAPIFRAEEHNTRRHLNEATSIDIEMAFADDKD 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            M     ++  A     +                      +       I+        D+
Sbjct: 244 AMDILEKVVYNAFLDVYE--------------------NRKREIDVLGIEFELPSKKFDR 283

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                    A   G+ ++    W +  SR   + I   +G      +  +P+       +
Sbjct: 284 ITYDEAIDIANAKGVEIS----WGEDLSREAEKAIGEEMG--GLYFITDWPSEIRPFYTM 337

Query: 252 YPAD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
              D P   K F+L   ++E+ +    +            E  +KK +  + +     +L
Sbjct: 338 PREDNPNICKAFDLMYKDLEISSGAQRIHLYD-----LLVENIKKKGLNPDGFTY---YL 389

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                 MP  +G  +G DR  M++T   NI E +  P  +
Sbjct: 390 EAFKYGMPPHAGWGLGADRFTMILTQQENIRECVLFPRDR 429


>gi|117924256|ref|YP_864873.1| tRNA synthetase, class II (D, K and N) [Magnetococcus sp. MC-1]
 gi|117608012|gb|ABK43467.1| tRNA synthetase, class II (D, K and N) [Magnetococcus sp. MC-1]
          Length = 317

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 95/327 (29%), Positives = 146/327 (44%), Gaps = 29/327 (8%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L +R  + + LR +F     +E+D  +LQ +   E HI             ++  YL 
Sbjct: 14  ERLRQRARLLAQLRAHFARTAALEVDPPALQRAIAPEHHIEPIRCYDG-----QQLCYLH 68

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPE   K+LLAAG   I+     +R+ EQG  H  EFT+LEWYR   S  QL  +   +
Sbjct: 69  TSPESCMKRLLAAGSGDIYFLGKVYRSEEQGEHHNHEFTLLEWYRVGWSLAQLQDETAGL 128

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I     +                     ++ A+AF +    D       P       L  
Sbjct: 129 IGDLLGIKAG----------------CAMSYAQAFMQVGGPD-------PHTATMAELLA 165

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A+Q  + +  +     +   +    +EP L      +++ +PA  +A+A I P  P   
Sbjct: 166 WAEQRAVSLPAELERGALLDYLQAVVVEPQLPHEQVVVVNGFPAERAAMAQIDPGPPPVA 225

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           +RFE+Y   +EL N   EL D  EQRHR E+   ++         +D+ FLA L   +P 
Sbjct: 226 QRFEVYVNGVELANGYLELTDGAEQRHRLEQVNAQRLVQGLSPIAVDQRFLAALQAGLPA 285

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWT 345
            SG+A+G DRL+ML  GA +++EV+  
Sbjct: 286 VSGVALGVDRLLMLQCGATSLDEVMPF 312


>gi|254552712|ref|ZP_05143159.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
          Length = 462

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/306 (19%), Positives = 112/306 (36%), Gaps = 28/306 (9%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P       +                 R     R  +  ++R       F+E+++  
Sbjct: 145 LRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPV 204

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T     + +   LYL+ +PE   K+ +  G +K+F     +RN  
Sbjct: 205 LQTLAGGAA-ARPFATHS---NALDIDLYLRIAPELFLKRCIVGGFDKVFELNRVFRNEG 260

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF+MLE Y+ + +Y+        +I+  A+ A                + E+ 
Sbjct: 261 ADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLPDGSVYDIDGEWA 320

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH------DDTWSDIFSRIL 222
           T+      Y ++ +    +   Q     L   A   G+                +   + 
Sbjct: 321 TIQ----MYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELW 376

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +  +  ++  T +  +P   + L   + + P  T++++LY   IEL     EL DP+
Sbjct: 377 ERTVGKS--LSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELAAGYSELSDPV 434

Query: 283 EQRHRF 288
            QR RF
Sbjct: 435 VQRERF 440


>gi|254373994|ref|ZP_04989476.1| lysyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151571714|gb|EDN37368.1| lysyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 307

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 96/326 (29%), Positives = 143/326 (43%), Gaps = 33/326 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             + KR    + +R +F +   +E+D+         +  I  FS      + +    YLQ
Sbjct: 4   ENIKKRAEYLAKIRNFFKDLDVLEVDTPLAYDYAVTDPFIDVFSI-----NTVAGKRYLQ 58

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           +SPE++ K+LLAAG   I+    A+R+   G LH  EFTM+EWYR    Y QLM++   +
Sbjct: 59  SSPEYAMKRLLAAGSGSIYQICKAFRDEPCGKLHNHEFTMIEWYRVGIDYYQLMQEMQKL 118

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                                   E  Y++  E F +Y NI       NP       L  
Sbjct: 119 FTMLKANL----------------EFIYLSYQEVFEKYYNI-------NPHDICLAELQA 155

Query: 200 QAQQA--GIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANIYPADP 256
             ++    I+   + T +D    +   KIE N    N    +  Y   +SALA       
Sbjct: 156 IVKENVGEIQGLRNPTIADCLDILFSYKIEKNLNQQNTIYFIYDYTIHQSALARKVRDKN 215

Query: 257 RF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 RFE++   IEL N   EL+D  EQ  RFE ++  +K+       ID   L CL 
Sbjct: 216 SQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLAMRKQQQKALLDIDTKLLECLE 275

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +P+ SG+A+GFDRL+M + G +NI 
Sbjct: 276 NIPECSGVALGFDRLLMSLEGISNIK 301


>gi|222445531|ref|ZP_03608046.1| hypothetical protein METSMIALI_01171 [Methanobrevibacter smithii
           DSM 2375]
 gi|261349911|ref|ZP_05975328.1| aspartate--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|222435096|gb|EEE42261.1| hypothetical protein METSMIALI_01171 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860694|gb|EFC92992.1| aspartate--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 439

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/370 (20%), Positives = 130/370 (35%), Gaps = 63/370 (17%)

Query: 2   HQIPSQPWWNR-----DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDS 46
             +P  P  ++     D     R               +N +  ++R++F EN F+EI++
Sbjct: 110 QPLPMDP-TDKVKAEIDTRLDSRFIDLRRDNVSAIFKIKNRMFHTVRDFFYENGFMEINT 168

Query: 47  MSLQYSP--GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
             L  S   G         TEL    +  K  +L  SP+   + ++++G +K+F     +
Sbjct: 169 PKLVASATEGG--------TELFPITYFEKEAFLGQSPQLYKQMMMSSGMDKVFEIGQIF 220

Query: 105 RNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R  E     H  E   ++   +      +MK   N++                       
Sbjct: 221 RAEEHDTLRHLNEAVSIDAEASFMDDIDVMKILNNMLEQVI------------------- 261

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               I + E      NI L   +  PD P   + Y +A         + +W +  SR   
Sbjct: 262 ----IDINEDCKEELNI-LEHEMPVPDGPFPVVTYDEAVDIVNSRDVEMSWGEDLSRAGE 316

Query: 224 EKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPI 282
           + +   +G      L  +P+            DP     F+L   N+EL +    +    
Sbjct: 317 KALGDVMG--GFYFLTEWPSEIKPFYVMPNSKDPTKAHAFDLMYNNLELSSGATRVH--- 371

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
            Q     K+++EK    N        +L      MP  +G  +G DRL M++TG  NI E
Sbjct: 372 -QYDVLVKQIEEK--GLNVASF--GSYLKAFEYGMPPHAGWGVGADRLAMVLTGVENIRE 426

Query: 342 VIWTPFSQSN 351
            +  P  +  
Sbjct: 427 TVLFPRDRHR 436


>gi|87306491|ref|ZP_01088638.1| lysyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87290670|gb|EAQ82557.1| lysyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 331

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 102/333 (30%), Positives = 148/333 (44%), Gaps = 25/333 (7%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII---QDHIRKPLYL 78
           L  R+ +   +R +F+  +F+E+++  L +    + H+   S  L     +    K L+L
Sbjct: 20  LHARSELLQQVRAFFLSREFLEVETPLLSHDSVIDRHLDPLSVTLFPDPRRPEEGKKLWL 79

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           QTSPEF  K+LLAAG   IF    A+R  E G  H  EFTMLEWYR         +  + 
Sbjct: 80  QTSPEFGMKRLLAAGATSIFQIGKAFRGAEMGERHNVEFTMLEWYRVG-DGYAAGRKLLA 138

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
            +                       + E +T AEAF +   +D      N        + 
Sbjct: 139 DLAGEVL----------------GDKVEMLTYAEAFQQQLGVDPHRASGNELLS----VA 178

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           LQ Q              +   +L E IEP+LG    TIL  YPA ++ALA +   DP  
Sbjct: 179 LQNQVPTPDSYDGSDCDLLRELLLTELIEPHLGATAPTILYDYPASQAALAQVSTDDPPI 238

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            +RFELY   +EL N   ELLD    R R +   Q + +      P     L  +   +P
Sbjct: 239 AERFELYVQGVELANGYHELLDAELLRQRNQTNNQARGEDGKYRLPEASRLLEAMEFGLP 298

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             SG A+G DRL+M+ TGA ++ EV+  P  ++
Sbjct: 299 ACSGTALGMDRLLMVKTGARSLAEVLSFPIDRA 331


>gi|254168902|ref|ZP_04875742.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622166|gb|EDY34741.1| aspartyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 428

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/343 (18%), Positives = 118/343 (34%), Gaps = 51/343 (14%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQD 70
            R+R        R+ I   +REY +   F+E+ +  +  +   G         TEL    
Sbjct: 127 LRKREVLAVFEIRSTILQGIREYLLNQNFVEVHTPKIVATATEGG--------TELFPVK 178

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +  K  YL  SP+   + L+AAG +++   A A+R  E     H  EF  ++   +    
Sbjct: 179 YFEKDAYLNQSPQLYKQVLMAAGLDRVLEVAPAFRAEEHNTTRHLNEFISIDIEMSFADE 238

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              M      I  A +   ++                             I+     + P
Sbjct: 239 ADAMHMLEGSIVNAIKKLKEERKEEME--------------------ILGINW----EVP 274

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
             P + + Y  A +   +   D  W + FS   ++ +     +     + R+P       
Sbjct: 275 SLPFKRITYDDALEIVRKKGIDMEWGEEFSTEALKALGSE--LQEFYFITRWPMEIKPFY 332

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
            +   D +++  F+L     E+ +                     + K  N      E +
Sbjct: 333 VL--PDGKYSHAFDLMYGEREITSGAQRNHVYESLIEV------MRSKGLNPENF--EYY 382

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           L      MP  +G  +G +RLVM++TG  NI E +  P  ++ 
Sbjct: 383 LRAFRYGMPPHAGWGLGLERLVMIITGVKNIRECVIFPRDRTR 425


>gi|284162109|ref|YP_003400732.1| aspartyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284012106|gb|ADB58059.1| aspartyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 432

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 121/342 (35%), Gaps = 44/342 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              + +     R+ +  S+R +  E+ FIE+++  +  +   G         TEL    +
Sbjct: 128 RKPKIQAIFRIRHQMLQSVRAFLCEHGFIEVNTPKIVSTATEGG--------TELFPISY 179

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + L++AG E++F     +R  E     H  E   ++   +   +E
Sbjct: 180 FEKEAFLNQSPQLYKQILMSAGFERVFEIGPIFRAEEHNTTRHLNEAISIDIEMSFTDHE 239

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +MK    +I    E   +    F N                         L   LD P 
Sbjct: 240 GVMKILEELIVRVYEDVVENCEKFLNW------------------------LNLKLDIPS 275

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
            P   + Y +A +   +   +  W +  +   +  +   +G     I+D     +   A 
Sbjct: 276 LPFERVTYDEALEIARKKGEEIPWGEDLTTPALRALAEEIGDVHYFIVDWPTECKPFYAM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
            Y   P   K F+L    +EL +    +          +      K +  E++   E +L
Sbjct: 336 PYEDRPEICKSFDLMKGPLELASGTQRIHKYDMLVESIKA-----KGLNPESF---EFYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                 MP  +G  +G +RL+M +    NI E +  P  +  
Sbjct: 388 EAFRYGMPPHAGWGLGAERLLMSMLNLKNIREAVLFPRDRHR 429


>gi|296120866|ref|YP_003628644.1| Lysine--tRNA ligase [Planctomyces limnophilus DSM 3776]
 gi|296013206|gb|ADG66445.1| Lysine--tRNA ligase [Planctomyces limnophilus DSM 3776]
          Length = 356

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 93/345 (26%), Positives = 152/345 (44%), Gaps = 23/345 (6%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
            L  R+ + ++ R++F++  + E+ +  L      ++    F T   +     +PL+LQT
Sbjct: 20  LLKLRSSLMAAARQFFLQAGYWEVTTPILSSEMVLDSWSDPFITTDAVT---ERPLFLQT 76

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SPE   K+LLAAG   IF F+  +R G+ G  H PEFT+LEWY         ++   N I
Sbjct: 77  SPEAHMKRLLAAGSGPIFQFSRGFRKGDFGPRHNPEFTLLEWYFPEGELTDQIQFVENFI 136

Query: 141 RCAAEVANQKIFSFQNVNCNPFSE-----------PEYITVAEAFARYANIDLGTTLDNP 189
           R     A +          +                E +T + AF R+  +         
Sbjct: 137 RLFFSEATRLRIQTAPRTHDFSRPVSSGRLLPSTAFERLTYSAAFERFLGLAALDVPVAE 196

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                  L     Q  +    +D      + +L+  IEP LG +   +L  YPA ++ LA
Sbjct: 197 LIAKARQL-----QLDLPGLDEDDRDGWLNDLLVNAIEPRLGFDRPVVLMDYPASQAGLA 251

Query: 250 NIYPAD---PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
              P     P    RFELY   +ELCN   EL DP+E  HR +   + ++K         
Sbjct: 252 TTRPLYPAGPEVANRFELYIDGVELCNGYHELTDPVELAHRAQTHARLREKAGLPPINPP 311

Query: 307 EDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +  ++ +    P ++G+++GFDRLVML  G + I +V+   + ++
Sbjct: 312 QRLMSAMAANFPSATGVSLGFDRLVMLALGTSTIADVMSFAWDRA 356


>gi|118497166|ref|YP_898216.1| tRNA synthetase class II (D, K and N) [Francisella tularensis
           subsp. novicida U112]
 gi|194323464|ref|ZP_03057241.1| tRNA synthetases class II (D, K and N) family protein [Francisella
           tularensis subsp. novicida FTE]
 gi|118423072|gb|ABK89462.1| tRNA synthetase class II (D, K and N) [Francisella novicida U112]
 gi|194322319|gb|EDX19800.1| tRNA synthetases class II (D, K and N) family protein [Francisella
           tularensis subsp. novicida FTE]
          Length = 307

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 96/326 (29%), Positives = 144/326 (44%), Gaps = 33/326 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             ++KR    + +R +F +   +E+D+         +  I  FS      + +    YLQ
Sbjct: 4   ENIIKRAEYLAKIRNFFKDLDVLEVDTPLAYDYAVTDPFIDVFSI-----NTVAGKRYLQ 58

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           +SPE++ K+LLAAG   I+    A+R+   G LH  EFTM+EWYR    Y QLM++   +
Sbjct: 59  SSPEYAMKRLLAAGSGSIYQICKAFRDEPCGKLHNHEFTMIEWYRVGIDYYQLMQEMQKL 118

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                                   E  Y++  E F +Y NI       NP       L  
Sbjct: 119 FTMLKANL----------------EFIYLSYQEVFEKYYNI-------NPHDICLAELQA 155

Query: 200 QAQQA--GIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANIYPADP 256
             ++    I+   + T +D    +   KIE N    N    +  Y   +SALA       
Sbjct: 156 IVKENVGEIQGLRNPTIADCLDILFSYKIEKNLNQQNTIYFIYDYTIHQSALARKVRDKN 215

Query: 257 RF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 RFE++   IEL N   EL+D  EQ  RFE ++  +K+       ID   L CL 
Sbjct: 216 SQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLATRKQQQKALLDIDTKLLECLE 275

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +P+ SG+A+GFDRL+M + G +NI 
Sbjct: 276 NIPECSGVALGFDRLLMSLEGISNIK 301


>gi|328675691|gb|AEB28366.1| Lysyl-tRNA synthetase-related protein [Francisella cf. novicida
           3523]
          Length = 307

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 96/324 (29%), Positives = 141/324 (43%), Gaps = 29/324 (8%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             + KR    + +R +F +   +E+D+         +  I  FS      + I    YLQ
Sbjct: 4   ENIKKRAEYLAKIRNFFKDLDVLEVDTPLAYDYAVTDPFIDVFSI-----NTIAGKRYLQ 58

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           +SPE++ K+LLAAG   I+    A+R+   G LH  EFTM+EWYR    Y QLM++   +
Sbjct: 59  SSPEYAMKRLLAAGSGSIYQICKAFRDEPCGKLHNHEFTMMEWYRVGIDYYQLMQEMQKL 118

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                                   E  Y++  E F +Y NI+   T     Q        
Sbjct: 119 FAMLKANL----------------EFIYLSYQETFEKYYNINPHDTCLAELQALVRENVG 162

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANIYPADPRF 258
           +     I+   + T +D    +   KIE +    N    +  Y   +SALA         
Sbjct: 163 E-----IQGLKNPTIADCLDILFSYKIEKHLNQQNTIYFIYDYTIHQSALARKVKDKNSQ 217

Query: 259 --TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM 316
               RFE++   IEL N   EL+D  EQ  RFE ++  +KK       ID   L CL  +
Sbjct: 218 LVAARFEVFCNGIELANGYYELIDKKEQLKRFESDLATRKKQQKALLDIDTKLLECLENI 277

Query: 317 PQSSGIAMGFDRLVMLVTGANNIN 340
           P+ SG+A+GFDRL+M + G  NI 
Sbjct: 278 PECSGVALGFDRLLMSLEGIGNIK 301


>gi|15669750|ref|NP_248563.1| aspartyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2500972|sp|Q58950|SYD_METJA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|1592183|gb|AAB99575.1| aspartyl-tRNA synthetase (aspS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 438

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 57/340 (16%), Positives = 112/340 (32%), Gaps = 45/340 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              + +     R+ +  S+R       FIE+++  L  S            TEL    + 
Sbjct: 135 RRPKVQAIFKIRSEMLKSVRNTLYNEGFIEVNTPKLVASCTEGG-------TELFPISYF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L+A G +++F  A  +R  E     H  E T ++   A    + 
Sbjct: 188 EREAFLGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEATSIDIEMAFADDKD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            M     ++  A     +                      +       I+     +  D+
Sbjct: 248 AMDILEKVVYNAFVDVYE--------------------NRKKEIETLGIEFELPPEKFDR 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                    A   G+ ++    W +  SR   + I   +       +  +P+        
Sbjct: 288 ITYDEAIDIANAKGVEIS----WGEDLSREAEKAIGEEM--EGLYFITDWPSEIRPFYTM 341

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P   K F+L   ++E+ +    +            E  +KK +  + +     +L
Sbjct: 342 PDEKNPNICKAFDLMYKDLEISSGAQRIHLYD-----LLVENIKKKGLNPDGFTY---YL 393

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                 MP  +G  +G DR  M++T   NI E +  P  +
Sbjct: 394 EAFKYGMPPHAGWGLGADRFTMVLTQQENIRECVLFPRDR 433


>gi|328676635|gb|AEB27505.1| Lysyl-tRNA synthetase-related protein [Francisella cf. novicida
           Fx1]
          Length = 307

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 96/326 (29%), Positives = 143/326 (43%), Gaps = 33/326 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             + KR    + +R +F +   +E+D+         +  I  FS      + +    YLQ
Sbjct: 4   ENIKKRAEYLAKIRNFFKDLDVLEVDTPLAYDYAVTDPFIDVFSI-----NTVAGKRYLQ 58

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           +SPE++ K+LLAAG   I+    A+R+   G LH  EFTM+EWYR    Y QLM++   +
Sbjct: 59  SSPEYAMKRLLAAGSGSIYQICKAFRDEPCGKLHNHEFTMIEWYRVGIDYYQLMQEMQKL 118

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                                   E  Y++  E F +Y NI       NP       L  
Sbjct: 119 FIMLKANL----------------EFIYLSYQEVFEKYYNI-------NPHDICLAELQA 155

Query: 200 QAQQA--GIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANIYPADP 256
             ++    I+   + T +D    +   KIE N    N    +  Y   +SALA       
Sbjct: 156 IVKENVGEIQGLRNPTIADCLDILFSYKIEKNLNQQNTIYFIYDYTIHQSALARKVRDKN 215

Query: 257 RF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 RFE++   IEL N   EL+D  EQ  RFE ++  +K+       ID   L CL 
Sbjct: 216 SQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLATRKQQQKALLDIDTKLLECLE 275

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +P+ SG+A+GFDRL+M + G +NI 
Sbjct: 276 NIPECSGVALGFDRLLMSLEGISNIK 301


>gi|208778959|ref|ZP_03246305.1| tRNA synthetases class II (D, K and N) family protein [Francisella
           novicida FTG]
 gi|208744759|gb|EDZ91057.1| tRNA synthetases class II (D, K and N) family protein [Francisella
           novicida FTG]
          Length = 307

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 96/326 (29%), Positives = 143/326 (43%), Gaps = 33/326 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             + KR    + +R +F +   +E+D+         +  I  FS      + +    YLQ
Sbjct: 4   ENIKKRAEYLAKIRNFFKDLDVLEVDTPLAYDYAVTDPFIDVFSI-----NTVAGKRYLQ 58

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           +SPE++ K+LLAAG   I+    A+R+   G LH  EFTM+EWYR    Y QLM++   +
Sbjct: 59  SSPEYAMKRLLAAGSGSIYQICKAFRDEPCGKLHNHEFTMIEWYRVGIDYYQLMQEMQKL 118

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                                   E  Y++  E F +Y NI       NP       L  
Sbjct: 119 FTMLKANL----------------EFIYLSYQEVFEKYYNI-------NPHNICLAELQA 155

Query: 200 QAQQA--GIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANIYPADP 256
             ++    I+   + T +D    +   KIE N    N    +  Y   +SALA       
Sbjct: 156 IVKENVGEIQGLRNPTIADCLDILFSYKIEKNLNQQNTIYFIYDYTIHQSALARKVRDKN 215

Query: 257 RF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 RFE++   IEL N   EL+D  EQ  RFE ++  +K+       ID   L CL 
Sbjct: 216 SQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLATRKQQQKALLDIDTKLLECLE 275

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +P+ SG+A+GFDRL+M + G +NI 
Sbjct: 276 NIPECSGVALGFDRLLMSLEGISNIK 301


>gi|57640427|ref|YP_182905.1| aspartyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|62296800|sp|Q52428|SYD_PYRKO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|302148834|pdb|3NEL|A Chain A, Aspartyl-Trna Synthetase Complexed With Aspartic Acid
 gi|302148835|pdb|3NEL|B Chain B, Aspartyl-Trna Synthetase Complexed With Aspartic Acid
 gi|302148836|pdb|3NEM|A Chain A, Aspartyl-Trna Synthetase Complexed With Aspartyl Adenylate
 gi|302148837|pdb|3NEM|B Chain B, Aspartyl-Trna Synthetase Complexed With Aspartyl Adenylate
 gi|302148838|pdb|3NEN|A Chain A, Unliganded Aspartyl-Trna Synthetase From Thermococcus
           Kodakarensis
 gi|302148839|pdb|3NEN|B Chain B, Unliganded Aspartyl-Trna Synthetase From Thermococcus
           Kodakarensis
 gi|57158751|dbj|BAD84681.1| aspartyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 438

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 127/368 (34%), Gaps = 59/368 (16%)

Query: 3   QIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM- 47
            +P  P        D     R               R+ +  ++R++F EN FIEI +  
Sbjct: 104 PLPLDPTGKVKAELDTRLDNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPK 163

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +           TEL    +  +  +L  SP+   + ++A+G ++++  A  +R  
Sbjct: 164 IIATATEGG-------TELFPMKYFEEDAFLAQSPQLYKQIMMASGLDRVYEIAPIFRAE 216

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  E   ++   A    E+ +   +  +   A                      
Sbjct: 217 EHNTTRHLNEAWSIDSEMAFIEDEEEVMSFLERLVAHAINY------------------- 257

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              V E  A+  +I L   L+ P  P   + Y +A +    +  +  W +         +
Sbjct: 258 ---VREHNAKELDI-LNFELEEPKLPFPRVSYDKALEILGDLGKEIPWGEDIDTEGERLL 313

Query: 227 EPNLGIN---CCTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +  N       L +YP+  +      Y   P   + F+L    +E+ +         
Sbjct: 314 GKYMMENENAPLYFLYQYPSEAKPFYIMKYDNKPEICRAFDLEYRGVEISSGGQREHRHD 373

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                  ++++EK  +  E++   E +L      MP   G  +G +RL+  +    NI E
Sbjct: 374 I----LVEQIKEK-GLNPESF---EFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIRE 425

Query: 342 VIWTPFSQ 349
           VI  P  +
Sbjct: 426 VILFPRDR 433


>gi|254173017|ref|ZP_04879691.1| aspartyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033173|gb|EEB74001.1| aspartyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 438

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/370 (17%), Positives = 123/370 (33%), Gaps = 59/370 (15%)

Query: 3   QIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM- 47
            +P  P        D     R               R+ +  ++R++F EN FIEI +  
Sbjct: 104 PLPLDPTGKVKAELDTRLDNRFMDVRRPEVMAIFKIRSSVFKAIRDFFHENGFIEIHTPK 163

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +           TEL    +  K  +L  SP+   + ++A+G ++++  A  +R  
Sbjct: 164 IIATATEGG-------TELFPMKYFEKDAFLAQSPQLYKQIMMASGLDRVYEIAPIFRAE 216

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  E   ++   A    E+ +   +  +        ++  + +    N      
Sbjct: 217 EHNTTRHLNEAWSVDAEMAFIESEEEVMALLERLVAYTINYVREHNAKELETLNF----- 271

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                              L+ P  P   L Y +A +    +     W +         +
Sbjct: 272 ------------------ELEEPKLPFPRLSYDKALEILADLGKTIEWGEDIDTEGERLL 313

Query: 227 EPNLGIN---CCTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +  N       L +YP+  +      Y   P   + F+L    +E+ +         
Sbjct: 314 GKYMMENEEAPLYFLYKYPSEAKPFYIMKYDDKPEICRAFDLEYRGVEITSGGQREHRVD 373

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                  ++++EK  +  E++   E +L      MP   G  +G +RL+  +    NI E
Sbjct: 374 V----LVEQIKEK-GLNPESF---EFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIRE 425

Query: 342 VIWTPFSQSN 351
           VI  P  +  
Sbjct: 426 VILFPRDRKR 435


>gi|146331864|gb|ABQ22438.1| lysyl-tRNA synthetase-like protein [Callithrix jacchus]
          Length = 180

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 3/164 (1%)

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
             R +L        +      T + +  +++ E +E        T +  +P   S LA  
Sbjct: 1   ETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTC--INPTFICDHPQIMSPLAKW 58

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
           + +    T+RFEL+    E+CNA  EL DP+ QR  FE++ + K    +E   IDE+F  
Sbjct: 59  HRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCT 118

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
            L   +P ++G  MG DR+ M +T +NNI EV+  P  +   ++
Sbjct: 119 ALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPEDKK 162


>gi|218658889|ref|ZP_03514819.1| lysyl-tRNA synthetase protein [Rhizobium etli IE4771]
          Length = 289

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 141/283 (49%), Positives = 173/283 (61%), Gaps = 7/283 (2%)

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +F    FIE+D+  LQ SPGNE H+ AF+TE +  D  R P YL TSPEF+CKKLLAAGE
Sbjct: 10  FFAREDFIEVDTAVLQISPGNEAHLHAFATEAVTTDGQRAPFYLHTSPEFACKKLLAAGE 69

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
           ++I CFAH +RN E+G LH PEFTMLEWYRA ESYE LM DC+ I+  AAE A      +
Sbjct: 70  QRISCFAHVYRNRERGPLHHPEFTMLEWYRAGESYESLMMDCVRILALAAETAKTDRLGY 129

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD----QPDRHLLYLQAQQAGIRVAH 210
           +                E                P       DR  L  + ++AG+RVA 
Sbjct: 130 RGRE---SDPFRRAGTGERRRSVRAPRRHRFFSRPVAADGSTDREHLAAELRRAGMRVAE 186

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           DD W+D+FSR+L+EKIEP+ G    TILD YP  E+ALA     DPR  +RFELYAC +E
Sbjct: 187 DDGWADLFSRVLVEKIEPHFGFGRITILDEYPVSEAALARPSARDPRVAERFELYACGVE 246

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           L N   EL +  EQ+ RFE EM EK ++Y ETYPIDE+FLA L
Sbjct: 247 LANGFGELTNAAEQKRRFEIEMAEKMRVYGETYPIDENFLAAL 289


>gi|187932052|ref|YP_001892037.1| tRNA synthetase class II (D, K and N) [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|254369741|ref|ZP_04985751.1| hypothetical protein FTAG_01073 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|254372533|ref|ZP_04988022.1| hypothetical protein FTCG_00095 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570260|gb|EDN35914.1| hypothetical protein FTCG_00095 [Francisella novicida GA99-3549]
 gi|157122700|gb|EDO66829.1| hypothetical protein FTAG_01073 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|187712961|gb|ACD31258.1| tRNA synthetase class II (D, K and N) [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 307

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 96/326 (29%), Positives = 143/326 (43%), Gaps = 33/326 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             + KR    + +R +F +   +E+D+         +  I  FS      + +    YLQ
Sbjct: 4   ENIKKRAEYLAKIRNFFKDLDVLEVDTPLAYDYAVTDPFIDVFSI-----NTVAGKKYLQ 58

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           +SPE++ K+LLAAG   I+    A+R+   G LH  EFTM+EWYR    Y QLM++   +
Sbjct: 59  SSPEYAMKRLLAAGSGSIYQICKAFRDEPCGKLHNHEFTMIEWYRVGIDYYQLMQEMQKL 118

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                                   E  Y++  E F +Y NI       NP       L  
Sbjct: 119 FTMLKANL----------------EFIYLSYQEVFEKYYNI-------NPHDICLAELQA 155

Query: 200 QAQQA--GIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANIYPADP 256
             ++    I+   + T +D    +   KIE N    N    +  Y   +SALA       
Sbjct: 156 IVKENVGEIQGLRNPTIADCLDILFSYKIEKNLNQQNTIYFIYDYTIHQSALARKVRDKN 215

Query: 257 RF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 RFE++   IEL N   EL+D  EQ  RFE ++  +K+       ID   L CL 
Sbjct: 216 SQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLATRKQQQKALLDIDTKLLECLE 275

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +P+ SG+A+GFDRL+M + G +NI 
Sbjct: 276 NIPECSGVALGFDRLLMSLEGISNIK 301


>gi|215424843|ref|ZP_03422762.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|289748113|ref|ZP_06507491.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T92]
 gi|289688700|gb|EFD56129.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T92]
          Length = 439

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 59/305 (19%), Positives = 111/305 (36%), Gaps = 28/305 (9%)

Query: 1   MHQIPSQPWWNRD------------FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           +  +P       +                 R     R  +  ++R       F+E+++  
Sbjct: 145 LRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPV 204

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           LQ   G     R F+T     + +   LYL+ +PE   K+ +  G +K+F     +RN  
Sbjct: 205 LQTLAGGAA-ARPFATHS---NALDIDLYLRIAPELFLKRCIVGGFDKVFELNRVFRNEG 260

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEF+MLE Y+ + +Y+        +I+  A+ A                + E+ 
Sbjct: 261 ADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLPDGSVYDIDGEWA 320

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH------DDTWSDIFSRIL 222
           T+      Y ++ +    +   Q     L   A   G+                +   + 
Sbjct: 321 TIQ----MYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELW 376

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +  +  ++  T +  +P   + L   + + P  T++++LY   IEL     EL DP+
Sbjct: 377 ERTVGKS--LSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYSELSDPV 434

Query: 283 EQRHR 287
            QR R
Sbjct: 435 VQRER 439


>gi|52548877|gb|AAU82726.1| aspartyl-tRNA synthetase [uncultured archaeon GZfos19C7]
          Length = 441

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 66/344 (19%), Positives = 128/344 (37%), Gaps = 50/344 (14%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
              R +   + R+ +  ++RE+  E  FIEI++   +  +    T +   S       + 
Sbjct: 135 RIERTKQIFIIRSRVLKAIREFLDERGFIEINTPKIVSAATEGGTALFPIS-------YF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L+A+G ++++  A  +R  E     H  E T ++   A  S ++
Sbjct: 188 EREAFLNQSPQLYKQMLMASGFDRVYEIAPIFRAEEHDTTKHLNEATSMDIEVAFVSDKE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +MK    +I                                 ++  A ++L   L+ P  
Sbjct: 248 VMKILEELIAFVYSKVVD------------------------YSGLAKLNLQLPLEVPKT 283

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
           P R + Y +A +A  +   +  W +         +   +G      +  +P         
Sbjct: 284 PFRRITYEEAIEALSKAGEEIEWGEDLGTSAEHTLGAMIGE--LYFITDWPCAI------ 335

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQR---HRFEKEMQEKKKIYNETYPID-- 306
               P + +  +  A + + CNA D +   +E      R       K+ I ++    D  
Sbjct: 336 ---KPFYAQPADAEAKSKDTCNAFDLMHPRVELASGSQRVHSYELLKRNIESKGLSADSF 392

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           E +L      MP  +G  +G DRL+M +    NI EV+  P  +
Sbjct: 393 EFYLDTFRFGMPPHAGWGLGIDRLLMSMLEIENIREVVLFPRDR 436


>gi|289207651|ref|YP_003459717.1| lysine--tRNA ligase [Thioalkalivibrio sp. K90mix]
 gi|288943282|gb|ADC70981.1| Lysine--tRNA ligase [Thioalkalivibrio sp. K90mix]
          Length = 321

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 83/321 (25%), Positives = 135/321 (42%), Gaps = 21/321 (6%)

Query: 28  IQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCK 87
           + + LR +F     +E+++  L +       +                 YLQTSPE+  K
Sbjct: 18  LLTGLRGFFAARNVLEVETPILSH----GAPLDPMVESWTATSPDGASGYLQTSPEYPMK 73

Query: 88  KLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
           +LLA G   I+  A  +R GE G  H PEFT+LEWYR    + +L ++ + +I   A + 
Sbjct: 74  RLLADGAPDIYQIARVFRGGEAGPRHNPEFTLLEWYRHGMDHHRLAREVVALIMNQAALD 133

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
                          +    I+    F  +  ID       P   D   L   A + G+ 
Sbjct: 134 AS---------WRRPARLREISYQALFQAHLGID-------PLVADADELQAVAARQGLD 177

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           +            ++   I P    +  T++  YP  ++ LA     D R   RFE+Y  
Sbjct: 178 IQGALDRDAWLDLLISLAIAPAFPDDRLTVVHDYPESQAVLARPCEQDARLAARFEVYWG 237

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
            +EL N   EL D  + R R +++   +++        D    A L + +P+ +G+A+G 
Sbjct: 238 ALELANGYHELSDLAQFRERRDRDQALRRQRGQVLPRPDAHLDAALASGLPECAGVALGV 297

Query: 327 DRLVMLVTGANNINEVIWTPF 347
           DRL+M + G   I +VI  PF
Sbjct: 298 DRLLMRLLGVERIEQVIDFPF 318


>gi|257457748|ref|ZP_05622909.1| tRNA synthetase, class II family [Treponema vincentii ATCC 35580]
 gi|257444798|gb|EEV19880.1| tRNA synthetase, class II family [Treponema vincentii ATCC 35580]
          Length = 342

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 87/334 (26%), Positives = 135/334 (40%), Gaps = 19/334 (5%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK----P 75
             L  R     + R +F+   ++E+D+ +L  +   E+ +  F TE +      +    P
Sbjct: 4   EALEFRAACLQAARNFFIGCDYLELDTPALAPALIPESCLEVFRTEYLKPFKTGEEAAVP 63

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLMK 134
           L+L  SPE   K ++AA    +F  +  +RN    G +H PEFTMLE+Y     Y   + 
Sbjct: 64  LFLVPSPEVFIKPVIAAHGRSVFQLSKCYRNCESVGHIHSPEFTMLEYYTMQADYRNSIL 123

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
                ++  A+       +   +          +T+ EAF RYA   L          + 
Sbjct: 124 ITEAFLQTMAQAVAGLPLADPELGAVLSKPFLQLTMDEAFKRYAGFSLAEAETPELALNA 183

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA----------P 244
             L L     G        W D++  +L+  IEP L  +    L  YPA           
Sbjct: 184 ERLGL----GGRAQYEGWAWDDLYELLLVHCIEPQLPSDVPVALLDYPARVPCLAQERTE 239

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
               A+      +  +R+E+Y   +EL N   E  D  E  H F  E   K       +P
Sbjct: 240 TRTAADGRRYIWKTKERWEVYVRGVELANCYTEARDAEEINHSFADEAAIKNTTARVPHP 299

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANN 338
           + ++F      MP  SG+AMGFDRL+ML+ G   
Sbjct: 300 VPDNFGGICARMPPCSGVAMGFDRLIMLLGGKKT 333


>gi|327400136|ref|YP_004340975.1| aspartyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327315644|gb|AEA46260.1| aspartyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 430

 Score =  179 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 68/350 (19%), Positives = 122/350 (34%), Gaps = 47/350 (13%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFST 64
              +      + +     R+ +  S+R +  E  FIE+++  +  +   G         T
Sbjct: 120 DHRYLDLRKPKIQAIFRIRHCMLQSVRRFLCEEGFIEVNTPKIVSTATEGG--------T 171

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWY 123
           EL    +  K  +L  SP+   + L+ AG EK+F     +R  E     H  E   ++  
Sbjct: 172 ELFPISYFEKEAFLNQSPQLYKQVLMGAGLEKVFEIGPIFRAEEHNTVRHLNEAISIDIE 231

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +   +          +    E    +I+   +V C  F     I               
Sbjct: 232 ASFMDH--------EGVMDVLERLVARIYEDVSVECEKFLSWLDI--------------- 268

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
             LD P+ P   L Y +A +       D  W +  S   ++ I  ++  +    +  +P 
Sbjct: 269 -KLDVPEVPFERLKYDEAIEIAHEGGEDIPWGEDLSTAALKIIAEHM--DSHYFIVDWPT 325

Query: 244 P-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
             +   A  Y   P   K F+L    +EL +    +        R E+       +  E+
Sbjct: 326 ESKPFYAMPYDDKPEVCKSFDLMHGWLELASGAQRIHLYDLLVKRIEE-----CGMSPES 380

Query: 303 YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           +     +L      MP  +G  +G +RL+M + G  NI E I  P  +  
Sbjct: 381 FG---FYLEAFRYGMPPHAGWGLGAERLLMSMLGLKNIREAIMFPRDRHR 427


>gi|42527784|ref|NP_972882.1| tRNA synthetase, class II family protein [Treponema denticola ATCC
           35405]
 gi|41818612|gb|AAS12801.1| tRNA synthetase, class II family protein [Treponema denticola ATCC
           35405]
          Length = 345

 Score =  179 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 89/338 (26%), Positives = 150/338 (44%), Gaps = 25/338 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI-----RK 74
             L  R +   + RE+F++  ++E+D+ +L      ET +  F TE +    +      K
Sbjct: 4   EALELRALSIQAAREFFIKKNYLELDTPALSGELIPETCLEVFKTEYLSPSLLKKSPTGK 63

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLM 133
            L+L  SPE   K ++A     +F  +  +RN    G +H PEFTMLE+Y  + +Y+  +
Sbjct: 64  ALFLVPSPEVYIKPIIAQTSRSVFQISKCYRNAESIGNIHSPEFTMLEYYTVNANYKDSV 123

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           K     +   ++   +     + V        E +T+ EAF +YA + L T         
Sbjct: 124 KISEEFLSHVSDRVKENPLVDREVLKTLSKGFECLTMDEAFRKYAGVPLSTEHSP----- 178

Query: 194 RHLLYLQAQQAGI---RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
              L   A++ G+       D    D++  IL+  +EPNL  N    +  YPA    LA 
Sbjct: 179 -EELAYYAEKLGLGEAENYSDWKEDDLYELILVHAVEPNLPKNRLIAILDYPAFVPCLAA 237

Query: 251 IYPA----------DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
                         + +  +R+E+Y   +EL N   E  +  +    F+ E + K+K   
Sbjct: 238 ENSKRVLNKKNEALEWKTVERWEVYLNGVELANCYTEERNKSKINSYFKNENELKQKNAL 297

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANN 338
             +P  ++F    ++M   SG+AMGFDRL+ML+ G   
Sbjct: 298 VPHPPVKNFGETCSKMSPCSGVAMGFDRLIMLLAGKKT 335


>gi|240103937|ref|YP_002960246.1| aspartyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239911491|gb|ACS34382.1| Aspartyl-tRNA synthetase (aspS) [Thermococcus gammatolerans EJ3]
          Length = 438

 Score =  178 bits (452), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 125/370 (33%), Gaps = 59/370 (15%)

Query: 3   QIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM- 47
            +P  P        D     R               R+ +  ++R++F E+ FIEI +  
Sbjct: 104 PLPLDPTGKVKAELDTRLDNRFMDVRRPEVMAIFKIRSSVFKAIRDFFHESGFIEIHTPK 163

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +           TEL    +  K  +L  SP+   + ++A+G ++++  A  +R  
Sbjct: 164 IIATATEGG-------TELFPMKYFEKDAFLAQSPQLYKQIMMASGLDRVYEIAPIFRAE 216

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  E   ++   A    E+ + + +  +        ++  + +    N      
Sbjct: 217 EHNTTRHLNEAWSIDAEMAFIESEEEVMELLERLVAHTINYVREHNAKELETLNF----- 271

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                              L+ P  P   L Y +A +    +  +  W +         +
Sbjct: 272 ------------------ELEEPKLPFPRLSYDKALEILADLGKEIPWGEDIDTEGERLL 313

Query: 227 EPNLGIN---CCTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +  N       L +YP+  +      Y   P   + F+L    +E+ +         
Sbjct: 314 GKYMMENENAPLYFLYKYPSEAKPFYIMKYDEKPEICRAFDLEYRGVEITSGGQREHRVD 373

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                  ++++EK  +  E++   E +L      MP   G  +G +RL+  +    NI E
Sbjct: 374 V----LVEQIKEK-GLNPESF---EFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIRE 425

Query: 342 VIWTPFSQSN 351
           VI  P  +  
Sbjct: 426 VILFPRDRKR 435


>gi|54113913|gb|AAV29590.1| NT02FT1092 [synthetic construct]
          Length = 307

 Score =  178 bits (452), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 96/331 (29%), Positives = 145/331 (43%), Gaps = 34/331 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             + KR    + +R +F +   +E+D+         +  I  FS      + +    Y+Q
Sbjct: 4   ENIKKRAEYLAKIRNFFKDLDVLEVDTPLAYDYAVTDPFIDVFSI-----NTVAGKKYIQ 58

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           +SPE++ K+LLAAG   I+    A+R+   G LH  EFTM+EWYR    Y QLM++   +
Sbjct: 59  SSPEYAMKRLLAAGSGSIYQICKAFRDEPCGKLHNHEFTMIEWYRVGIDYYQLMQEMQKL 118

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                                   E  Y++  E F +Y NI       NP       L  
Sbjct: 119 FTMLKANL----------------EFIYLSYQEVFEKYYNI-------NPHDICLAELQA 155

Query: 200 QAQQA--GIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANIYPADP 256
             ++    I+   + T +D    +   KIE N    N    +  Y   +SALA       
Sbjct: 156 IVKENVGEIQGLRNPTIADCLDILFSYKIEKNLNQQNTIYFIYDYTIHQSALARKVRDKN 215

Query: 257 RF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 RFE++   IEL N   EL+D  EQ  RFE ++  +K+       ID   L CL 
Sbjct: 216 SQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLATRKQQQKALLDIDTKLLECLE 275

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNIN-EVIW 344
            +P+ SG+A+GFDRL+M + G +NI  + I 
Sbjct: 276 NIPECSGVALGFDRLLMSLEGISNIKNQTIL 306


>gi|256811422|ref|YP_003128791.1| aspartyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256794622|gb|ACV25291.1| aspartyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 434

 Score =  178 bits (452), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 59/340 (17%), Positives = 115/340 (33%), Gaps = 45/340 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              + +     R+ +  S+R+   E  FIE+++  L  S            TEL    + 
Sbjct: 131 RRPKIQAIFKIRSEMLRSVRKTLYEEGFIEVNTPKLVASCTEGG-------TELFPISYF 183

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L+A G +++F  A  +R  E     H  E T ++   A    + 
Sbjct: 184 EREAFLGQSPQLYKQMLMATGLDRVFEIAPIFRAEEHNTRRHLNEATSIDIEMAFADDKD 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            M+    ++  A     +                      +       I+     +  D+
Sbjct: 244 AMEMLEKVVYNAFLDVYE--------------------NRKREIETLGIEFELPPEKFDR 283

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                    A   G+ +     W +  SR   + I   +G      +  +P+        
Sbjct: 284 ITYDEAIDIANAKGVEIE----WGEDLSREAEKVIGEEMG--GLYFITDWPSETRPFYTM 337

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P   K F+L   ++E+ +    +            E  +KK +  + +     +L
Sbjct: 338 PDEKNPNICKAFDLMYKDLEISSGAQRIHLYD-----LLVENIKKKGLNPDGFTY---YL 389

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                 MP  +G  +G DR  M++T   NI E +  P  +
Sbjct: 390 EAFKYGMPPHAGWGLGADRFTMVLTQQENIRECVLFPRDR 429


>gi|89256864|ref|YP_514226.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115315245|ref|YP_763968.1| lysine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156503038|ref|YP_001429103.1| tRNA synthetases class II protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009243|ref|ZP_02274174.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368140|ref|ZP_04984160.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|290953247|ref|ZP_06557868.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313527|ref|ZP_06804120.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144695|emb|CAJ80026.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115130144|gb|ABI83331.1| lysine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253950|gb|EBA53044.1| lysyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|156253641|gb|ABU62147.1| tRNA synthetases class II protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 307

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 95/326 (29%), Positives = 143/326 (43%), Gaps = 33/326 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             + KR    + +R +F +   +E+D+         +  I  FS      + +    YLQ
Sbjct: 4   ENIKKRAEYLAKIRNFFKDLDVLEVDTPLAYDYAVTDPFIDVFSI-----NTVAGKKYLQ 58

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           +SPE++ K+LLAAG   I+    A+R+   G LH  EFTM+EWYR    Y QLM++   +
Sbjct: 59  SSPEYAMKRLLAAGSGSIYQICKAFRDEPCGKLHNHEFTMIEWYRVGIDYYQLMQEMQKL 118

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                                   E  Y++  E F +Y NI       NP       L  
Sbjct: 119 FTMLKANL----------------EFIYLSYQEVFEKYYNI-------NPHDICLAELQA 155

Query: 200 QAQQA--GIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANIYPADP 256
             ++    I+   + T +D    +   KIE N    N    +  Y   +SAL+       
Sbjct: 156 IVKENVGEIQGLRNPTIADCLDILFSYKIEKNLNQQNTIYFIYDYTIHQSALSRKVRDKN 215

Query: 257 RF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 RFE++   IEL N   EL+D  EQ  RFE ++  +K+       ID   L CL 
Sbjct: 216 SQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLVTRKQQQKALLDIDTKLLECLE 275

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +P+ SG+A+GFDRL+M + G +NI 
Sbjct: 276 NIPECSGVALGFDRLLMSLEGISNIK 301


>gi|330837283|ref|YP_004411924.1| Lysine--tRNA ligase [Spirochaeta coccoides DSM 17374]
 gi|329749186|gb|AEC02542.1| Lysine--tRNA ligase [Spirochaeta coccoides DSM 17374]
          Length = 356

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 101/332 (30%), Positives = 155/332 (46%), Gaps = 23/332 (6%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
            +R+ +  ++R +F  + ++E+D+  L      E  I  F+T    +    +  YL  SP
Sbjct: 34  KQRSRLLKAMRSWFDSHGYLEVDTPLLSPDLIPEPTIHTFATTFSHEFLGSREFYLVPSP 93

Query: 83  EFSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           E   KKLLAAG   I+ F+H +R N + G  H PEFTMLE+Y      +  M     ++ 
Sbjct: 94  EVFMKKLLAAGSGSIYQFSHCFRNNEQIGSHHNPEFTMLEYYTLDADEQDSMALTEELLA 153

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
             A          +N   +       +++A A   YA IDL    D  D      L   A
Sbjct: 154 ATA---------PKNCPDHLLPPFRKMSMAAACHAYAGIDLEKNQDVRD------LRRAA 198

Query: 202 QQAGIRVA-HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
            + G+ +    ++W D F+RI +  +EP+L  +   +LD+YP     LA      P + K
Sbjct: 199 LRLGLSLPEEPESWEDTFNRIFLTFVEPSLPQDKPLVLDKYPIQIECLAAEDETGP-WRK 257

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFLACL-TE 315
           R+E+YA  +EL N  DE+ D  + R  + KE      E+ +        D  F      +
Sbjct: 258 RWEMYAGGVELANCYDEMRDAQKIRAYYRKEYAKLSTERSQNGAVIPDADLSFADIFTKD 317

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            P+ SG+AMG DRL+ML TG  ++  VI  PF
Sbjct: 318 FPRCSGVAMGMDRLLMLQTGITSLKGVILFPF 349


>gi|302799643|ref|XP_002981580.1| hypothetical protein SELMODRAFT_114752 [Selaginella moellendorffii]
 gi|300150746|gb|EFJ17395.1| hypothetical protein SELMODRAFT_114752 [Selaginella moellendorffii]
          Length = 294

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 76/306 (24%), Positives = 117/306 (38%), Gaps = 21/306 (6%)

Query: 54  GNE--THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
           G       R   T     + + + L L+ + E   K +     E++      +RN     
Sbjct: 3   GGARGADARPSITH---HNSVERDLVLRIATELHLKWV---PVERVDELGRIFRNEGIST 56

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS----EPEY 167
            H PEFT +E Y+A+  Y  +M    ++I   AE                FS    +   
Sbjct: 57  RHNPEFTSIEIYQAYADYNDMMALAEDLIAKCAEAILGNATLLYQATGIDFSALGSDLSA 116

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              A   A     D        +      +  +     +R+          +++    +E
Sbjct: 117 AKSAALSALSPRKDESLQTVIANCATVGNVLNEVHIYFLRLRRFVNVMMSVAQVFEAVVE 176

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   T +  +P   S LA  +        RFELY C  EL NA  EL DPIEQ   
Sbjct: 177 KT--LIQPTFVTNHPVEVSPLAKAHRR------RFELYICGRELANAFSELTDPIEQVRA 228

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  + K  +    +DEDFL  L   MP ++G+ +G DRLVML+T + +I +VI  P
Sbjct: 229 LVSACHPQHKNDSYEVTLDEDFLTALEYGMPPTAGMGIGIDRLVMLLTDSPSIRDVIAFP 288

Query: 347 FSQSNQ 352
             +S Q
Sbjct: 289 VLKSQQ 294


>gi|2129413|pir||JC4352 aspartate-tRNA ligase (EC 6.1.1.12) - Pyrococcus sp
 gi|1136773|dbj|BAA08115.1| aspartyl-tRNA synthetase [Pyrococcus sp.]
          Length = 438

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 127/368 (34%), Gaps = 59/368 (16%)

Query: 3   QIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM- 47
            +P  P        D     R               R+ +  ++R++F EN FIEI +  
Sbjct: 104 PLPLDPTGKVKAELDTRLDNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPK 163

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +           TEL    +  +  +L  SP+   + ++A+G ++++  A  +R  
Sbjct: 164 IIATATEGG-------TELFPMKYFEEDAFLAQSPQLYKQIMMASGLDRVYEIAPIFRAE 216

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  E   ++   A    E+ +   +  +   A                      
Sbjct: 217 EHNTTRHLNEAWSIDSEMAFIEDEEEVMSFLERLVAHAINY------------------- 257

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              V E  A+  +I L   L+ P  P   + Y +A +    +  +  W +         +
Sbjct: 258 ---VREHNAKELDI-LNFELEEPKLPFPRVSYDKALEILGDLGKEIPWGEDIDTEGERLL 313

Query: 227 EPNLGIN---CCTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +  N       L +YP+  +      Y   P   + F+L    +E+ +         
Sbjct: 314 GKYMMENENAPLYFLYQYPSEAKPFYIMKYDNKPEICRAFDLEYRGVEISSGGQREHRHD 373

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                  ++++EK  +  E++   E +L      MP   G  +G +R++  +    NI E
Sbjct: 374 I----LVEQIKEK-GLNPESF---EFYLKAFRYGMPPHGGFGLGAERVIKQMLDLPNIRE 425

Query: 342 VIWTPFSQ 349
           VI  P  +
Sbjct: 426 VILFPRDR 433


>gi|56707618|ref|YP_169514.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670089|ref|YP_666646.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134302446|ref|YP_001122416.1| tRNA synthetase, class II (D, K and N) [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|224456688|ref|ZP_03665161.1| tRNA synthetase, class II (D, K and N) [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|254370135|ref|ZP_04986141.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874438|ref|ZP_05247148.1| tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604110|emb|CAG45109.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320422|emb|CAL08492.1| Lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134050223|gb|ABO47294.1| tRNA synthetase, class II (D, K and N) [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|151568379|gb|EDN34033.1| lysyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840437|gb|EET18873.1| tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158775|gb|ADA78166.1| tRNA synthetase, class II (D, K and N) [Francisella tularensis
           subsp. tularensis NE061598]
          Length = 307

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 95/326 (29%), Positives = 143/326 (43%), Gaps = 33/326 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             + KR    + +R +F +   +E+D+         +  I  FS      + +    Y+Q
Sbjct: 4   ENIKKRAEYLAKIRNFFKDLDVLEVDTPLAYDYAVTDPFIDVFSI-----NTVAGKKYIQ 58

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           +SPE++ K+LLAAG   I+    A+R+   G LH  EFTM+EWYR    Y QLM++   +
Sbjct: 59  SSPEYAMKRLLAAGSGSIYQICKAFRDEPCGKLHNHEFTMIEWYRVGIDYYQLMQEMQKL 118

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                                   E  Y++  E F +Y NI       NP       L  
Sbjct: 119 FTMLKANL----------------EFIYLSYQEVFEKYYNI-------NPHDICLAELQA 155

Query: 200 QAQQA--GIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANIYPADP 256
             ++    I+   + T +D    +   KIE N    N    +  Y   +SALA       
Sbjct: 156 IVKENVGEIQGLRNPTIADCLDILFSYKIEKNLNQQNTIYFIYDYTIHQSALARKVRDKN 215

Query: 257 RF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 RFE++   IEL N   EL+D  EQ  RFE ++  +K+       ID   L CL 
Sbjct: 216 SQLVAARFEVFCNGIELANGYYELIDKKEQSKRFENDLATRKQQQKALLDIDTKLLECLE 275

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +P+ SG+A+GFDRL+M + G +NI 
Sbjct: 276 NIPECSGVALGFDRLLMSLEGISNIK 301


>gi|4388836|pdb|1B8A|A Chain A, Aspartyl-Trna Synthetase
 gi|4388837|pdb|1B8A|B Chain B, Aspartyl-Trna Synthetase
          Length = 438

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/368 (17%), Positives = 126/368 (34%), Gaps = 59/368 (16%)

Query: 3   QIPSQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDSM- 47
            +P  P          R                   R+ +  ++R++F EN FIEI +  
Sbjct: 104 PLPLDPTGKVKAELDTRLNNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPK 163

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +           TEL    +  +  +L  SP+   + ++A+G ++++  A  +R  
Sbjct: 164 IIATATEGG-------TELFPMKYFEEDAFLAESPQLYKEIMMASGLDRVYEIAPIFRAE 216

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  E   ++   A    E+ +   +  +   A                      
Sbjct: 217 EHNTTRHLNEAWSIDSEMAFIEDEEEVMSFLERLVAHAINY------------------- 257

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              V E  A+  +I L   L+ P  P   + Y +A +    +  +  W +         +
Sbjct: 258 ---VREHNAKELDI-LNFELEEPKLPFPRVSYDKALEILGDLGKEIPWGEDIDTEGERLL 313

Query: 227 EPNLGIN---CCTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +  N       L +YP+  +      Y   P   + F+L    +E+ +         
Sbjct: 314 GKYMMENENAPLYFLYQYPSEAKPFYIMKYDNKPEICRAFDLEYRGVEISSGGQREHRHD 373

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                  ++++EK  +  E++   E +L      MP   G  +G +RL+  +    NI E
Sbjct: 374 I----LVEQIKEK-GLNPESF---EFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIRE 425

Query: 342 VIWTPFSQ 349
           VI  P  +
Sbjct: 426 VILFPRDR 433


>gi|332976957|gb|EGK13772.1| asparagine--tRNA ligase [Desmospora sp. 8437]
          Length = 429

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/349 (18%), Positives = 115/349 (32%), Gaps = 43/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+R  L  R+ I  ++R +     F  +D   L  S    T      
Sbjct: 114 MDHRHLWIRS--PRQRAILRIRSKIVQAVRGWLDGQGFTLVDPPVLTPSSCEGT------ 165

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T L    +  +  YL  S +    +  A    +++ F  A+R  +     H  EF M+E 
Sbjct: 166 TNLFHTKYFDEDAYLTQSGQLYM-EAAAMALGRVYSFGPAFRAEKSKTRRHLIEFWMIEP 224

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E+ +    N++        +                               D 
Sbjct: 225 EMAFVDHEENLVIQENMLTHLVRYVLENCREE--------------------LEILGRD- 263

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             +L+    P   + Y +A +   R   + TW + F      KI  +   +    +  YP
Sbjct: 264 PASLEKVQGPFPRITYDEAVELLNREGMEFTWGEDFGAPHETKIAES--FDRPVFITHYP 321

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
               +      P+ P      +L A     E+      + DP     RF++    ++   
Sbjct: 322 TEIKAFYMKPDPSRPEVALCADLIAPEGYGEIIGGSQRIDDPALLDERFQQHQLSRE--- 378

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  + +D   L         SG  +G +R V  + G +++ E I  P  
Sbjct: 379 DYAWYMD---LRK-YGTVPHSGFGLGLERTVAWICGLDHVRETIPFPRM 423


>gi|150400467|ref|YP_001324233.1| aspartyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166225356|sp|A6USZ9|SYD_META3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150013170|gb|ABR55621.1| aspartyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 438

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 59/341 (17%), Positives = 116/341 (34%), Gaps = 47/341 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              + +     R+ +  S+R  F +N FI++D+  L  S   G         TEL    +
Sbjct: 135 RRPKIQSLFKLRSEVLKSIRNTFHDNGFIDVDTPKLVASATEGG--------TELFPISY 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + ++AAG +++F     +R  E     H  E   ++   +     
Sbjct: 187 FDKEAFLGQSPQLYKQMMMAAGFDRVFEIGPIFRAEEHNTRRHLNEAISIDCEMSFAD-- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                        A    +K+ +    +    ++ E  T          IDL        
Sbjct: 245 ----------EKDAMEILEKVINNAFTDIYNNNQKELQT--------LGIDLKVQETPFP 286

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           + +           G+ +     W + FSR     +   +  +    +  +P        
Sbjct: 287 RIEYTEAVDMVNAKGVEME----WGEDFSRPAEAALGEMM--DGFYFITDWPTEIRPFYT 340

Query: 251 -IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                +P+  K F+L   ++E+ +                 E  ++  +  E +     +
Sbjct: 341 LPNEDNPKLCKAFDLMYKDLEISSGAQRNHKYD-----LLVEGIKRMGLNPEGFGT---Y 392

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           L      MP  SG  +G +RL+M++    NI E +  P  +
Sbjct: 393 LEAFKYGMPPHSGWGVGIERLMMIMACQQNIRECVLFPRDR 433


>gi|150399675|ref|YP_001323442.1| aspartyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166225362|sp|A6UQQ8|SYD_METVS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150012378|gb|ABR54830.1| aspartyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 438

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 60/341 (17%), Positives = 116/341 (34%), Gaps = 47/341 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              + +     R+ +  S+R+ F E  FIE+++  L  S   G         TEL    +
Sbjct: 135 RRPKIQAIFKIRSEMLKSIRKTFSEEGFIEVNTPKLVASATEGG--------TELFPISY 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + ++A G +K+F  A  +R  E     H  E   ++   +  + +
Sbjct: 187 FEKEAFLGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDTEMSFVNEK 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
             M                +           ++ P  I   E                P+
Sbjct: 247 DAMAML-------------EKVVHNCYTDIEYNRPSEIETLELNFEI-----------PE 282

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           +    + Y +A    +    +  W +  SR   + I   +G      +  +P        
Sbjct: 283 KTFPKVTYSEAVDVAVSKGVEIEWGEDLSRAAEKAIGDEMG--GLYFITEWPTQTRPFYT 340

Query: 251 -IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                D +  K F+L    +E+ +    +            +   K+ +  +++   E +
Sbjct: 341 LPDENDNKICKAFDLMYKELEISSGAQRIHKYDSLV-----QNIAKRGMNPDSF---ETY 392

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           L      MP  +G  +G DR  M++T   NI E +  P  +
Sbjct: 393 LEAFRYGMPPHAGWGLGADRFTMILTNQENIRECVLFPRDR 433


>gi|298675477|ref|YP_003727227.1| aspartyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288465|gb|ADI74431.1| aspartyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 443

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 58/343 (16%), Positives = 111/343 (32%), Gaps = 45/343 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
              R       R+ +  ++R+ F    FIE  +   +  +    T +   +       + 
Sbjct: 134 RKPRTSAIFKIRHEVLKAVRDNFTREGFIETTTPKVVATATEGGTSLFPIT-------YF 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L++ G EK+F     +R  E     H  E T ++   +   +  
Sbjct: 187 DREAFLNQSPQLFKQILMSGGLEKVFEIGPIFRAEEHDTRRHLNEATSIDMESSFSDHFD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   N I  A     +                     A     Y  IDL        +
Sbjct: 247 IMETLENTIAHAYSQVKE--------------------NASQQLEYLGIDLEVPETPFKR 286

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN---CCTILDRYPAPESAL 248
                      Q G     +  W D  S +    +  ++          +  +P      
Sbjct: 287 LTYSEAIDIINQYG---KEELEWGDDLSTLSEHTLGEHVYNETGAHHYFIIDWPTEIKPF 343

Query: 249 A-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
               Y  +P  +K F++    +EL +    +      ++R E +  +             
Sbjct: 344 YAMPYEDNPEISKTFDMMHTRLELSSGAQRIHYYDMLKNRIENQGLDPDSFD-------- 395

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +L      MP  +G  +G +RL+M + G  NI EV+  P  +
Sbjct: 396 FYLDAFRYGMPPHAGWGLGCERLLMTMLGLENIREVVLFPRDR 438


>gi|218262600|ref|ZP_03476997.1| hypothetical protein PRABACTJOHN_02676 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223276|gb|EEC95926.1| hypothetical protein PRABACTJOHN_02676 [Parabacteroides johnsonii
           DSM 18315]
          Length = 208

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 52/136 (38%), Positives = 72/136 (52%), Gaps = 3/136 (2%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I  E  E        T +  YP   S L  ++ + P  T+RFEL     EL NA  E
Sbjct: 1   IDEIFGEFCEGT--FIQPTFIIDYPVEMSPLTKMHRSKPGLTERFELMVNGKELANAYSE 58

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DPI+Q  RF+++++  +K  +E   ID+DFL  L   MP +SGI +G DRLVML+TG 
Sbjct: 59  LNDPIDQEERFKEQLRLSEKGDDEAMFIDQDFLRALQFGMPPTSGIGIGIDRLVMLMTGQ 118

Query: 337 NNINEVIWTPFSQSNQ 352
             I EV+  P  +  +
Sbjct: 119 TTIQEVLLFPQMRPEK 134


>gi|262190219|ref|ZP_06048494.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae CT 5369-93]
 gi|262033888|gb|EEY52353.1| lysyl-tRNA synthetase (class II) [Vibrio cholerae CT 5369-93]
          Length = 155

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 3/154 (1%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A+   + V    T   +   I  E  EP   +   T +  YPA  S LA     +P FT
Sbjct: 4   IAKSVHVDVEPFWTCGQLLEEIFGETAEPK--LMQPTFITGYPADISPLARRSDDNPFFT 61

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
            RFE +    E+ N   EL D  +Q  RF+ +++ K+   +E    D D++  L   +P 
Sbjct: 62  DRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPP 121

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           ++G  +G DRLVML+T  + I +VI  P  +  Q
Sbjct: 122 TAGQGIGIDRLVMLLTNTHTIRDVILFPAMRPQQ 155


>gi|218782114|ref|YP_002433432.1| asparaginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218763498|gb|ACL05964.1| Asparaginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 464

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 116/350 (33%), Gaps = 36/350 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  +F +  F+ I +  +  S       +   +T+  
Sbjct: 130 AHLRPRTNKFGALFRIRSSMALAVHNFFADRGFVYIQTPIITGSDCEGAGEMFTLTTQAK 189

Query: 68  IQ------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTML 120
            +      D   KP YL  S +   +    A    ++ F   +R        H  EF M+
Sbjct: 190 GETLAPEKDFFGKPAYLTVSGQLEAEMYALA-LGAVYTFGPTFRAENSNTSRHAAEFWMI 248

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A       M     ++R  A  A +K     + + + F+     T+++      N 
Sbjct: 249 EPEAAFADLNDNMALGEELVRHLASHALEKC----SQDVDLFARFVDKTLSQTLDNIINN 304

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D                    Q++  +  +   W           I          I+  
Sbjct: 305 DFVRMTYTE-------AVEALQKSDRKFQYQPMWGKDLQTEHERYITEEYCKKPV-IVYD 356

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKKKIY 299
           YPA           D +     ++    I       E++   ++  R +  + + K+   
Sbjct: 357 YPASIKPFYMRMNPDGKTVAAMDVLVPRI------GEIIGGSQREERLDMLQARIKEMGL 410

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +E       +L          SG  MGF+R++M+VTG +NI +VI  P +
Sbjct: 411 SEEEY--WWYLDSRRFGTAPHSGFGMGFERVLMMVTGVSNIRDVIPFPRT 458


>gi|326491469|dbj|BAJ94212.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326502506|dbj|BAJ95316.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 220

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 5/195 (2%)

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +       I + +     A +D+   LD         L    ++ GI+ +   T + +
Sbjct: 27  EIDFTPPYRRIDMMQELKSVAGLDIP--LDLSSDEANQYLAATCEKYGIKCSPPQTTARL 84

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             +I    +E        T +  +P   S LA  +      T+RFEL+    E+CNA  E
Sbjct: 85  LDKITGHFLEATCV--NPTFIINHPEIMSPLAKWHRTQSGLTERFELFINKHEVCNAYTE 142

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           L DP+ QR RFE +++ ++   +E   +DE F   L   +P + G  MG DR+ ML+T +
Sbjct: 143 LNDPLVQRQRFEDQLRSRQSGDDEAMALDEAFCTALEYALPPTGGWGMGIDRIAMLLTDS 202

Query: 337 NNINEVIWTPFSQSN 351
            NI EV+  P  +  
Sbjct: 203 QNIKEVLLFPTMKPQ 217


>gi|313829497|gb|EFS67211.1| putative lysyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
          Length = 988

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/273 (21%), Positives = 98/273 (35%), Gaps = 19/273 (6%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +PS+     + +   R+R             L  R+    ++RE  + + +IE+++ 
Sbjct: 722 LRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVETP 781

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ   G   + R F T +   +     LYL+ +PE   K+L+  G  ++F     +RN 
Sbjct: 782 ILQTIHGGA-NARPFHTHI---NAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNE 837

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFTMLE Y+A+  Y Q+      +I  AA  A                E + 
Sbjct: 838 GADATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDL 897

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                       I  G   +      +  L   A + GI      +  D+   +     E
Sbjct: 898 ANEWHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSE 957

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTK 260
                   T    +P   S L   +  DPR  +
Sbjct: 958 --HVTVEPTFFCDFPTDVSPLTRQHRDDPRLAE 988


>gi|94265194|ref|ZP_01288956.1| tRNA synthetase, class II (G, H, P and S):tRNA synthetase, class II
           (D, K and N) [delta proteobacterium MLMS-1]
 gi|93454335|gb|EAT04642.1| tRNA synthetase, class II (G, H, P and S):tRNA synthetase, class II
           (D, K and N) [delta proteobacterium MLMS-1]
          Length = 355

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 104/356 (29%), Positives = 148/356 (41%), Gaps = 41/356 (11%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           L  R  +  ++R +F +  ++E+++  L  +P  E H+                 +LQTS
Sbjct: 4   LWLRAAMIRAIRRFFEQRHYLEVETPLLIPAPAPEPHLLPQR---------AGKWFLQTS 54

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   K+LLA G  +I+     +R  E+G  H PEFTMLEWYRA   Y  LM +C  ++ 
Sbjct: 55  PEICMKRLLARGIPRIYQICKCFRRQERGRRHLPEFTMLEWYRAGADYYDLMAECEELLP 114

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
             A               N  +     T AE             L   +   R  +   A
Sbjct: 115 AVAAALAGAAPDGPGRALNRRAGAVGQTAAEQGDGDVTDHGVPHLAASETAMRTSVREPA 174

Query: 202 QQAGIRVAHDDTWSD--------------------------------IFSRILIEKIEPN 229
           +     V  D    D                                 F ++L+EKIEP 
Sbjct: 175 RSPQDVVPRDRLHGDGISLLPPWQRLTVAEAFRRYAGLEVQEALRQERFEQLLVEKIEPR 234

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
           LG    T L  YPA   ALA + P +P   +RFELY   IEL N   EL DP+EQ+ RF 
Sbjct: 235 LGRQRPTFLYDYPAELGALARLSPHNPAVAERFELYIAGIELANGFSELNDPVEQQCRFT 294

Query: 290 KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           ++    +       P+   FL  L  MP ++GIA+G DRL M   GA +I+++   
Sbjct: 295 RDRAAIRAAGRRPPPLPRRFLEELHAMPPAAGIALGIDRLAMFFAGAESIDQLQAF 350


>gi|126465208|ref|YP_001040317.1| aspartyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126014031|gb|ABN69409.1| aspartyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 418

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 57/367 (15%), Positives = 111/367 (30%), Gaps = 52/367 (14%)

Query: 1   MHQIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDS 46
           +  +P           D   + R               R  I  + R+YF  N FIEI +
Sbjct: 85  LEPLPVDTVGKVPALLDTRIKYRYLLVRNPVEKAIFRIRAGIIEAARQYFNNNGFIEIHT 144

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             +  + G E     F  +           YL  SP+   + L+A    ++F     +R 
Sbjct: 145 PKIV-AAGAEGGATLFPVQYFENKA-----YLSQSPQLYKQMLIAG-FPRVFEITPYFRA 197

Query: 107 GEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
            +     H  E   ++  +      + + + +  +        +K +  +          
Sbjct: 198 EKFNTTRHLNESWGIDAEQGFIDSVEDVLNTLEDLIVYINNYIRKNYVEEQ--------- 248

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
                         I++        +          +  G+ V+  +  SD   + L E 
Sbjct: 249 ----------ETLGIEIEKLDKPFKRLKFEEAIDLLRSEGLEVSEGEDLSDAAEKKLGEI 298

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E          +  +P   +    +   D   T++F+L    +E+ +         +  
Sbjct: 299 MEEKGY--KIYFIIGFPWQATGFYYMREEDGYHTRKFDLDYKGLEIASGGQREHRYDKLV 356

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
                    K K  N        +L      MP   G  +G +RL+M + G  NI E I 
Sbjct: 357 ------SALKDKGLNPEDF--AFYLEAFKYGMPPHGGFGLGIERLMMKMLGLENIREAIL 408

Query: 345 TPFSQSN 351
               ++ 
Sbjct: 409 FVRDRTR 415


>gi|94267110|ref|ZP_01290746.1| tRNA synthetase, class II (G, H, P and S):tRNA synthetase, class II
           (D, K and N) [delta proteobacterium MLMS-1]
 gi|93452181|gb|EAT02845.1| tRNA synthetase, class II (G, H, P and S):tRNA synthetase, class II
           (D, K and N) [delta proteobacterium MLMS-1]
          Length = 310

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 104/338 (30%), Positives = 150/338 (44%), Gaps = 50/338 (14%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           L  R  +  ++R +F +  ++E+++  L  +P  E H+                 +LQTS
Sbjct: 4   LWLRAAMIRAIRRFFEQRHYLEVETPLLIPAPAPEPHLLPQR---------AGKWFLQTS 54

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   K+LLA G  +I+     +R  E+G  H PEFTMLEWYRA   Y  LM +C  ++ 
Sbjct: 55  PEICMKRLLARGIPRIYQICKCFRRRERGRRHLPEFTMLEWYRAGADYHDLMAECEELLP 114

Query: 142 CA--------------AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
                                        V  +     + +TVAEAF RYA +++   L 
Sbjct: 115 AVAAALAGAANAAPPGHGAQGAGPGWSAAVEVSLQPPWQRLTVAEAFRRYAGLEVQEALR 174

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                                         F ++L+EKIEP LG    T L  YPA   A
Sbjct: 175 QER---------------------------FEQLLVEKIEPRLGRQRPTFLHDYPAELGA 207

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           LA + P +P   +RFELY   IEL N   EL DP+EQ+ RF ++    +       P+  
Sbjct: 208 LARLSPHNPAVAERFELYIAGIELANGFSELNDPVEQQCRFTRDRAAIRAAGRRPPPLPR 267

Query: 308 DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FL  L  MP ++GIA+G DRL M   GA +I+++   
Sbjct: 268 RFLEELHAMPPAAGIALGIDRLAMFFAGAESIDQLQAF 305


>gi|73670622|ref|YP_306637.1| aspartyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|97196719|sp|Q466Y5|SYD_METBF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|72397784|gb|AAZ72057.1| aspartyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 444

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 56/344 (16%), Positives = 112/344 (32%), Gaps = 47/344 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                      R+    + REYFV+N FIE  +   +  +    T +   +       + 
Sbjct: 135 RRAETTAVFKIRHQALQATREYFVQNGFIETATPKVVATATEGGTALFPIT-------YF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L++ G +++F     +R  E     H  E T ++   +   +  
Sbjct: 188 DREAFLNQSPQLFKQILMSGGFDRVFEIGPIFRAEEHDTRRHLNEATSIDVEVSFADHFD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   N++        +K                     +       I+L        +
Sbjct: 248 VMEILENLVAYVYAQVIEKC--------------------KPSLETLGIELKVPKTPFLK 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF----SRILIEKIEPNLGINCCTILDRYPAPESA 247
              + +         R      W D        I+   +    G      +  +P     
Sbjct: 288 LTYNEVIEI---INARSEEKMHWGDDLGTFGEHIVGNYVYETTG-ESHYFIIDWPTEIKP 343

Query: 248 LA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                Y   P ++K F++    +EL +    +  P   + R E +      +  E +   
Sbjct: 344 FYAMPYEDRPEYSKSFDMMHRTMELSSGAQRIHIPDLLKSRIESQ-----GLNPEGF--- 395

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           E +L      MP  +G  MG +R +M + G  NI + +  P  +
Sbjct: 396 EFYLKAFEYGMPPHAGWGMGCERFIMTMLGTENIRDTVLFPRDR 439


>gi|52550554|gb|AAU84403.1| aspartyl-tRNA synthetase [uncultured archaeon GZfos9E5]
          Length = 439

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 58/343 (16%), Positives = 117/343 (34%), Gaps = 48/343 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
              R +   + R+ +  ++R +  E +FIEI++   +  +    T +   S       + 
Sbjct: 133 RIERTKQIFIIRSRVLKAIRGFLDEREFIEINTPKIVSAATEGGTALFPIS-------YF 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L+A+G ++++  A  +R  E     H  E T ++   A  S  +
Sbjct: 186 EREAFLNQSPQLYKQMLMASGFDRVYEIAPIFRAEEHDTTKHLNEATSMDIEVAFVSDME 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +MK    +I                            +    +   A ++L   L+ P  
Sbjct: 246 VMKILEELIAFVY------------------------SKIVDYPGLAKLNLQLPLEVPKT 281

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
           P R + Y +A ++      +  W +         +   +G      +  +P         
Sbjct: 282 PFRRITYEEAIESLSEAGEEIEWGEDLGTSAEHTLGAMIGE--LYFITDWPCAIKPFYAQ 339

Query: 252 YPA----DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                         F+L    +EL +    +      + + E +               E
Sbjct: 340 PANAEAKSKDTCNAFDLMHPRVELASGSQRVHSYELLKQKIESKGLSADSF--------E 391

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +L      MP  +G  +G DRL+M +    NI EV+  P  +
Sbjct: 392 FYLDTFRFGMPPHAGWGLGIDRLLMCMLEIENIREVVLFPRDR 434


>gi|86211231|gb|ABC87291.1| putative lysyl-tRNA synthetase [Ceratopteris richardii]
          Length = 194

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 3/168 (1%)

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           D   +     L    ++  +      T + +  +++   +E        T +  +P   S
Sbjct: 16  DLSSEEANAYLKDACKKLEVNCPPPQTTARLLDKLVGHFLESQCV--NPTFIINHPRIMS 73

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
            LA  + + P  T+RFEL+    E+CNA  EL DP+ QR  F  +M+ K+   +E  PID
Sbjct: 74  PLAKWHRSIPDLTERFELFVNRHEVCNAYTELNDPVVQRQCFLDQMKSKQLGDDEAMPID 133

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           E F   L   +P + G  MG DR  ML+T + NI EV+  P  + N+E
Sbjct: 134 ESFCTALEYGLPPTGGWGMGIDRFTMLLTDSQNIKEVLLFPAMKPNEE 181


>gi|212223489|ref|YP_002306725.1| aspartyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212008446|gb|ACJ15828.1| aspartyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 443

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 60/368 (16%), Positives = 122/368 (33%), Gaps = 59/368 (16%)

Query: 3   QIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM- 47
            +P  P        D     R               R+ +  ++ ++F    FIE+ +  
Sbjct: 109 PLPLDPTGKVKAELDTRLDNRFMDVRKPEVTAIFKIRSSVFKAVHDFFHGEGFIEVHTPK 168

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +           TEL    +  K  +L  SP+   + ++A+G ++++  A  +R  
Sbjct: 169 IIATATEGG-------TELFPMKYFEKDAFLAQSPQLYKQIMMASGLDRVYEVAPIFRAE 221

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  E   ++   A    E+ + + +  +        ++    +    N      
Sbjct: 222 EHNTTRHLNEAWSIDAEMAFIENEEEVMELLERLIAYTINHVREHNEKELETLNF----- 276

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                              L+ P  P   L Y +A +    +  +  W +         +
Sbjct: 277 ------------------ELEEPKLPFPRLAYDKALEILADLGKEIPWGEDIDTEGERLL 318

Query: 227 EPNLGIN---CCTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +  N       L RYP+  +      Y   P   + F+L    +E+ +         
Sbjct: 319 GKYMMENENAPLYFLYRYPSEAKPFYIMKYDDKPEICRAFDLEYRGVEITSGGQREHRVD 378

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                  ++++EK  +  E++   E +L      MP   G  +G +RL+  +   NNI E
Sbjct: 379 V----LVEQIKEK-GLNPESF---EFYLKAFRYGMPPHGGFGLGAERLLKQMLNLNNIRE 430

Query: 342 VIWTPFSQ 349
           V+  P  +
Sbjct: 431 VVLFPRDR 438


>gi|169824319|ref|YP_001691930.1| asparaginyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831124|dbj|BAG08040.1| asparaginyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 461

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 113/357 (31%), Gaps = 45/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+ +  ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 121 HLRPRTNTFNAVFRVRSRLAFAIHKFFNERGFVYVHTPIITGSDAEGAGEM--FRVTTLD 178

Query: 69  QDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            D++           +  +     L  S +   +    A    ++ F   +R+       
Sbjct: 179 LDNLPKDDDGNVDFTQDFFSKSTNLTVSGQLQAEAYALA-FRNVYTFGPTFRSEHSNTPR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E        + +     +++R       + +          F+      + E
Sbjct: 238 HAAEFWMMEPEICFADLDDVCSLAEDMVRYII----KDVMENCEEEIKFFNSFVDKNLIE 293

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              + AN                      +++G +  +   W         + +   +  
Sbjct: 294 RLTKVANKSFKKLTYTE-------AIDILKKSGEKFEYPVKWGMDLQTEHEKYLSEKVVD 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
                +  YP    A       D +     +L    I       EL+   ++  RFE   
Sbjct: 347 GPV-FVTDYPKEIKAFYMRLNDDKKTVAATDLLVPGI------GELIGGSQREERFELLD 399

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           Q+  ++        + +L        +  G  +GF+R+VM +TG +NI +VI  P +
Sbjct: 400 QKMDELGFNKEEY-KWYLDLRKYGGVKHGGFGLGFERMVMYMTGMSNIRDVIPFPRT 455


>gi|302380725|ref|ZP_07269190.1| asparagine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302311668|gb|EFK93684.1| asparagine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 461

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 111/357 (31%), Gaps = 45/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+ +  ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 121 HLRPRTNTFNAVFRVRSRLAFAIHKFFNERGFVYVHTPIITGSDAEGAGEM--FRVTTLD 178

Query: 69  QD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            D             +  +     L  S +   +    A    ++ F   +R+       
Sbjct: 179 LDNLPKDDNGNIDFSQDFFSKSTNLTVSGQLQAEAYALA-FRNVYTFGPTFRSEHSNTPR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E        + +     +++R       + +          F+      + E
Sbjct: 238 HAAEFWMMEPEICFADLDDVCSLAEDMVRYII----KDVMENCEEEIKFFNSFVDKNLIE 293

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              + AN                      Q++G +  +   W         + +   +  
Sbjct: 294 RLTKVANKSFKKLTYTE-------AIDILQKSGEKFEYPVKWGMDLQTEHEKYLSEKVVD 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
                +  YP    A       D +     +L    I       EL+   ++  RFE   
Sbjct: 347 GPV-FVTDYPKEIKAFYMRLNDDKKTVAATDLLVPGI------GELIGGSQREERFELLD 399

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           Q+  ++        + +L        +  G  +GF+R+VM +TG +NI +VI  P +
Sbjct: 400 QKMDELGFNKEEY-KWYLDLRKYGGVKHGGFGLGFERMVMYMTGMSNIRDVIPFPRT 455


>gi|21226176|ref|NP_632098.1| aspartyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|24212403|sp|Q8Q0R2|SYD_METMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|20904406|gb|AAM29770.1| Aspartyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 444

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 54/343 (15%), Positives = 108/343 (31%), Gaps = 45/343 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                      R+    ++REYFV+  FIE  +   +  +    T +   +       + 
Sbjct: 135 RRAETTAVFKIRHESLRAIREYFVKYNFIETATPKVVATATEGGTALFPIT-------YF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L++ G +++F     +R  E     H  E T ++   +   +  
Sbjct: 188 DREAFLNQSPQLFKQILMSGGFDRVFEIGPIFRAEEHDTRRHLNEATSIDVEVSFADHFD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   N++        +   S                          +DL        +
Sbjct: 248 VMELLENLVAYVYTRVIENCKSS--------------------LEVLGVDLKVPKTPFLK 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI---NCCTILDRYPAPESAL 248
                +         R      W D    +    +  ++          +  +P      
Sbjct: 288 LTYDEVIEI---INSRCEEKMHWGDDLGTLGEHTVGDHVYETTGESHYFIIDWPTEIKPF 344

Query: 249 A-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
               Y   P F+K F++    +EL +    +  P   ++R E +               E
Sbjct: 345 YAMPYEDRPEFSKSFDMMHRTMELSSGAQRIHIPSLLKNRIESQGLNPDGF--------E 396

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +L      MP  +G  MG +R VM + G  NI + +  P  +
Sbjct: 397 FYLKAFEFGMPPHAGWGMGCERFVMTMLGTENIRDTVLFPRDR 439


>gi|193084144|gb|ACF09810.1| aspartyl-tRNA synthetase [uncultured marine group III euryarchaeote
           SAT1000-53-B3]
          Length = 427

 Score =  175 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 111/332 (33%), Gaps = 46/332 (13%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
              R  I  ++ ++     F+E+ +   +  +           T L    +  K  YL  
Sbjct: 137 FQIRAAISGAVHKHLRRENFLEVQTPKIIASATEGG-------TSLFEMKYFDKTAYLAQ 189

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+   + L++ G E+++    A+R  E     H  EF  ++   +    + +M     +
Sbjct: 190 SPQLYKQILMSGGLERVYEVGPAFRAEEHNTPRHLNEFISIDIEMSFADDDVVMGVMERL 249

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +  AA   +++  +                      +   I+         +        
Sbjct: 250 VATAARSVSKETKA---------------------LKALGIEPIDLELPLPRITYDEAVE 288

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            AQ           W +  S      I   +  N    + ++P            DP+++
Sbjct: 289 MAQGK-------VKWGEDLSMEATRTIAEQM--NGFYFITKWPLSLKPFYIQPDEDPKYS 339

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQS 319
           K F+     +E+ +    + D    R R +++  +        + +D         MP  
Sbjct: 340 KGFDFMYNEVEMTSGGQRVHDVNLLRERLKEQGLDPDGFN---HYLDPF----RYGMPPH 392

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           +G  +G DRL M+  GA N+ E +  P  ++ 
Sbjct: 393 AGWGLGLDRLAMIFAGAKNVRECVLFPRDRNR 424


>gi|50551341|ref|XP_503144.1| YALI0D22264p [Yarrowia lipolytica]
 gi|49649012|emb|CAG81342.1| YALI0D22264p [Yarrowia lipolytica]
          Length = 564

 Score =  175 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 120/349 (34%), Gaps = 39/349 (11%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               ++ +    RE+ V   FIEI +  +  +  +E     F
Sbjct: 236 DTRLDARCIDLRTATNQAIFRIQHGVCQLFREFLVSKGFIEIHTPKMI-AAASEGGANVF 294

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                  ++ +   +L  SP+   + L++   E++F  A  +R        H  EFT L+
Sbjct: 295 K-----LNYFKGDAFLAQSPQLYKQMLMSGDFERVFEIAPVFRAENSNTHRHMTEFTGLD 349

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A E +   + D ++ +        +K +             E          +    
Sbjct: 350 LEMAFEEHYDEVIDVLSELFIFIFSELKKRYGNDIATVRKQYPVE---------EFKLPK 400

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
            G  +  P      LL    ++AG  V   +  S    ++L + +      +   ILD++
Sbjct: 401 DGKMVKLPFSEGVKLL----REAGKDVGDYEDLSTENEKLLGKIVREKYDTD-FYILDKF 455

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           P +P ++  ++ +    E+ +    + DP      F K+     ++  
Sbjct: 456 PLAVRPFYTMPDPENPNYSNSYDFFMRGEEILSGAQRIHDPE-----FLKQRMAAHEVDP 510

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E+  + +D++       P  +G  +G +R+VM      NI      P  
Sbjct: 511 ESLGL-KDYVDAFAYGAPPHAGGGIGLERVVMFFLDLKNIRRASLFPRD 558


>gi|320354733|ref|YP_004196072.1| lysyl-tRNA synthetase-like protein GenX [Desulfobulbus propionicus
           DSM 2032]
 gi|320123235|gb|ADW18781.1| lysyl-tRNA synthetase-related protein GenX [Desulfobulbus
           propionicus DSM 2032]
          Length = 305

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 97/331 (29%), Positives = 153/331 (46%), Gaps = 44/331 (13%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           L +R+ +  ++R +F+E  ++E+D+         E++I  F+          +  +L TS
Sbjct: 7   LRQRSFLLQAIRSFFLERAYLEVDTPLRLPVLLPESNIVPFN---------SEGCFLHTS 57

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   K+LLA G  +IF   H +R  E G LHQ EFTMLEWY     Y  LM++C  ++ 
Sbjct: 58  PELCMKRLLARGCSQIFQICHCFRKEEHGRLHQSEFTMLEWYHTGWDYVDLMQECEELVC 117

Query: 142 -------CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
                        +  +  +++         + +TVA+AF  +A I +   +        
Sbjct: 118 FVMNRGFSMFRGVHGSLLCWRDHRVAMTRPWDRLTVADAFDMFAGISVSEAI-------- 169

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                               + +F  IL+  IEP+LG +    L  YP    +LA     
Sbjct: 170 -------------------RTGMFDEILVTAIEPHLGKDRPVFLYDYPISLGSLARRSQR 210

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
            P   +RFELY   IEL N   EL+DP EQR RF  E+            + E+FLA L+
Sbjct: 211 TPDVAERFELYVAGIELANGFSELIDPEEQRSRFAAEIDAIHSQGRTA-SMPENFLADLS 269

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            +P+++GIA+G DRL ML+T  + ++  +  
Sbjct: 270 RVPETAGIALGVDRLFMLLTERDILSAAMPF 300


>gi|320538212|ref|ZP_08038107.1| tRNA synthetase class II [Treponema phagedenis F0421]
 gi|320145029|gb|EFW36750.1| tRNA synthetase class II [Treponema phagedenis F0421]
          Length = 373

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 91/335 (27%), Positives = 144/335 (42%), Gaps = 17/335 (5%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE---LIIQDHIRKPL 76
             L  R +   + R++F+EN ++E+D+ +L  +   ET +  F TE     +     K L
Sbjct: 37  EALEFRALCLQTARDFFIENNYLELDTPALAAALIPETCLEVFQTEAIQPFMPKESAKKL 96

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
           +L  SPE   K ++A  +  +F  +  +RN    G +H PEFTMLE+Y  +  Y+  +K 
Sbjct: 97  FLVPSPEVFIKPVIAQTKRSVFQISKCYRNGESVGRIHSPEFTMLEYYTMNADYKDSIKI 156

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
             +      +       +            + +T+ +AF RYA   L          ++ 
Sbjct: 157 TESFFCFIIDKIKNHPLASPEACNFFAEGFQLLTMEDAFIRYAGFSLAEQDSVKKLAEQA 216

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                A  +G   AH   W D++  IL+  IEP L    C  L  YPA    LA      
Sbjct: 217 RRLDLA--SGTEFAH-YGWDDLYELILVHCIEPALPKKRCVALMDYPAEVPCLAKNKAFT 273

Query: 256 PRFTK----------RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
            +  +          R+E+YA  IEL N   E  D       F +E   K+K     +P 
Sbjct: 274 IQTAEGKTVTRQVKERWEVYAGGIELANCYTEERDSDTVNRYFAEEAALKEKTALVPHPS 333

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
            ++F     +MP  SG+A+G DRL+ L+ G   I+
Sbjct: 334 VKNFGDICAQMPPCSGVALGMDRLIALLAGRKTID 368


>gi|116753936|ref|YP_843054.1| aspartyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|116665387|gb|ABK14414.1| aspartyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 434

 Score =  175 bits (444), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 117/365 (32%), Gaps = 58/365 (15%)

Query: 3   QIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
            +P  P        D     R                + +  SLR  F E  FIE+ +  
Sbjct: 105 PLPLDPTGKVGAELDTRLDARFLDLRRPASMAVFKIESAVMRSLRNTFYEKGFIEVCTPK 164

Query: 49  LQYSP-GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +  +     T +   S       +  +  +L  SP+   + L+A G +++F     +R  
Sbjct: 165 IVATATEGGTALFPIS-------YFEREAFLNQSPQLYKQILMATGLDRVFEIGPIFRAE 217

Query: 108 EQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  E   ++   ++  +E +M    N +  A    ++                 
Sbjct: 218 EHDTRRHLNEAISVDVEVSYADHEDVMSLLENAVSSAYRYVSEIC--------------- 262

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                E   +   +DL        +         A ++G +      W D         +
Sbjct: 263 -----EKELQILGVDLDIPKTPFRRITYTEALEMASESGRK---SMEWGDDIDTETEHYL 314

Query: 227 EPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
              +G      L  +P+         Y   P   K F+L   ++EL +    + D     
Sbjct: 315 GSLIGE--HYFLTDWPSSVKPYYTQPYEDKPEICKGFDLMHPSMELASGAQRVHDYELLI 372

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R ++     K +  E++   E +L      MP  +G  +G  RLV  + G  NI + + 
Sbjct: 373 SRIKE-----KGLNPESF---EFYLKPFRYGMPPHAGWGLGLARLVQTMLGLENIRDAVL 424

Query: 345 TPFSQ 349
            P  +
Sbjct: 425 FPRDR 429


>gi|52548501|gb|AAU82350.1| aspartyl-tRNA synthetase [uncultured archaeon GZfos17A3]
          Length = 439

 Score =  175 bits (444), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 59/343 (17%), Positives = 117/343 (34%), Gaps = 48/343 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
              R +   + R+ +  ++RE+  E  FIEI++   +  +    T +   S       + 
Sbjct: 133 RIERTKQIFIIRSCVLKAIREFLDERGFIEINTPKIVSAATEGGTALFPIS-------YF 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L+A+G ++++  A  +R  E     H  E T ++   A  S ++
Sbjct: 186 EREAFLNQSPQLYKQMLMASGFDRVYEIAPIFRAEEHDTTKHLNEATSMDIEVAFVSDKE 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +MK    +I                            +    +   A ++L   L+ P  
Sbjct: 246 VMKILEELIVFVY------------------------SKIVDYPGLAKLNLQLPLEVPKI 281

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
           P R + Y +A ++      +  W +         +   +G      +  +P         
Sbjct: 282 PFRRITYEEAIESVSEAGEEIEWGEDLGTSAERTLGAMIGE--LYFITDWPCAIKPFYAQ 339

Query: 252 ----YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                         F+L    +EL +    +      +   E +               E
Sbjct: 340 PADAEAKSKHTCNAFDLMHPRVELASGSQRVHSYELLKRNIESKGLSADSF--------E 391

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +L      MP  +G  +G DRL+M +    NI EV+  P  +
Sbjct: 392 FYLDTFRFGMPPHAGWGLGIDRLLMCMLEIENIREVVLFPRDR 434


>gi|303233935|ref|ZP_07320584.1| asparagine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302494860|gb|EFL54617.1| asparagine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 461

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 111/357 (31%), Gaps = 45/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+ +  ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 121 HLRPRTNTFNAVFRVRSRLAFAIHKFFNERGFVYVHTPIITGSDAEGAGEM--FRVTTLD 178

Query: 69  QD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            D             +  +     L  S +   +    A    ++ F   +R+       
Sbjct: 179 LDNLPKDDNGNIDFSQDFFSKSTNLTVSGQLQAEAYALA-FRNVYTFGPTFRSEHSNTPR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E        + +     +++R       + +          F+      + E
Sbjct: 238 HAAEFWMMEPEICFADLDDVCSLAEDMVRYII----KDVMENCEEEIKFFNSFVDKNLIE 293

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              + AN                      Q++G +  +   W         + +   +  
Sbjct: 294 RLTKVANKSFKKLTYTE-------AIDILQKSGEKFEYPVEWGMDLQTEHEKYLSEKVVD 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
                +  YP    A       D +     +L    I       EL+   ++  RFE   
Sbjct: 347 GPV-FVTDYPKEIKAFYMRLNDDKKTVAATDLLVPGI------GELIGGSQREERFELLD 399

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           Q+  ++        + +L        +  G  +GF+R+VM +TG +NI +VI  P +
Sbjct: 400 QKMDELGFNKEEY-KWYLDLRKYGGVKHGGFGLGFERMVMYMTGMSNIRDVIPFPRT 455


>gi|240277935|gb|EER41442.1| lysyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 209

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 3/179 (1%)

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                                 L    ++  I     +T + +  +++ E IE       
Sbjct: 6   EEATGEKFPPGDQLHTMETNEFLKKLLKKVNIECTPPETNARMLDKLVGEFIEETC--IN 63

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  +P   S LA  +  +    +RFE + C  E+ NA  EL DP +QR RFE++  +
Sbjct: 64  PTFITGHPQMMSPLAKYHRDNVGLCERFEAFVCKKEIVNAYTELNDPFDQRLRFEEQASQ 123

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           K +  +E   IDE+F   L   +P + G  MG DRLVM +T   +I EV+  PF +  +
Sbjct: 124 KAQGDDEAQLIDENFCTSLEFGLPPTGGWGMGIDRLVMFLTDNYSIKEVLAFPFMKEEK 182


>gi|45359179|ref|NP_988736.1| aspartyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|62287566|sp|Q6LWU0|SYD_METMP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|45048054|emb|CAF31172.1| Aspartyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 438

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 58/341 (17%), Positives = 118/341 (34%), Gaps = 47/341 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              + +     R+ +  S+R+ F +  FIE+++  L  S   G         TEL    +
Sbjct: 135 RRPKIQAIFKIRSEMLKSIRKTFADEGFIEVNTPKLVASATEGG--------TELFPISY 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + ++A G +K+F  A  +R  E     H  E   ++   +  + +
Sbjct: 187 FEKEAFLGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDSEMSFVNEK 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
             M                +   +   +   ++ P  I + E                P+
Sbjct: 247 DAMAML-------------EKVVYNCYSDIEYNRPNEIELLELNWEI-----------PE 282

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           +    + Y +A    I    +  W +  SR     +   +G      +  +P        
Sbjct: 283 KTFDKVTYTEAIDIAIAKGVEIEWGEDLSRAAERAVGDEMG--GLYFITEWPTQTRPFYT 340

Query: 251 -IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
             +  D +  K F+L    +E+ +    +            +      +  +++   E +
Sbjct: 341 LPHKHDNKVCKAFDLMYKELEISSGAQRVHKYD-----LLVQNISNMGLNPDSF---ETY 392

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           L      MP  +G  +G DR  M++T  +NI E +  P  +
Sbjct: 393 LEAFKYGMPPHAGWGLGADRFAMVLTAQDNIRECVLFPRDR 433


>gi|302821725|ref|XP_002992524.1| hypothetical protein SELMODRAFT_448794 [Selaginella moellendorffii]
 gi|300139726|gb|EFJ06462.1| hypothetical protein SELMODRAFT_448794 [Selaginella moellendorffii]
          Length = 487

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/362 (17%), Positives = 126/362 (34%), Gaps = 49/362 (13%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           +++  YR R                R    + +R Y   +   E+++  L+         
Sbjct: 155 DQEERYRNRVLDLIVNPDIKSVFAARTEAVNYIRTYMETSGVTEVNTGVLEQRSV----A 210

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
             F T     + +   + L+ S +   + L+ +    ++     +RN E    H PEFT 
Sbjct: 211 NGFKTH---HNQLNLDMVLRVSSDQLLQ-LIVSNFFGVYEIGKQFRNEEMSRTHNPEFTT 266

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------CNPFSEPEYITVA 171
            E Y+A+  Y+ LM+    ++             + + +         +       + V 
Sbjct: 267 CEMYKAYADYKDLMEMTEKLLSGLVMKITGGYKVYYHSDGYDSPPVVIDFTPPFRRVEVV 326

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +       +     L +        L       G+      + +++ S +    +E    
Sbjct: 327 KGLEEALGLKFPEDLASEQAN--EFLRETCSSKGVACPPPLSTANLLSSLAGHFLEATSV 384

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
               T +  YP   +  A  + + P   + F+L+    +L +   +  DP E +      
Sbjct: 385 S--PTFIVDYPKRSTPFAKTHSSTPLLAEHFKLFVSKSQLVSGFTQCRDPAEAQE----- 437

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                   +E + + E        +P  SG A G DRLVML+T + +I EV+  P  +  
Sbjct: 438 -------NSELHTLLE------YGLPPCSGWACGIDRLVMLLTDSVDIKEVVLYPALKPA 484

Query: 352 QE 353
           ++
Sbjct: 485 ED 486


>gi|281357071|ref|ZP_06243561.1| tRNA synthetase class II (D K and N) [Victivallis vadensis ATCC
           BAA-548]
 gi|281316629|gb|EFB00653.1| tRNA synthetase class II (D K and N) [Victivallis vadensis ATCC
           BAA-548]
          Length = 296

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 101/322 (31%), Positives = 145/322 (45%), Gaps = 37/322 (11%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           L +R+ +  ++REYF +  FIE+++    ++P  E  I +   E           +L+TS
Sbjct: 7   LTRRSALFRAIREYFYDRDFIEVETPVKIHAPAPEEFIESVRAEGD---------FLRTS 57

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE + K +LA G E+IF     +R  E G  H+ EFTMLE+Y     Y +  +     + 
Sbjct: 58  PELAMKVMLADGFERIFQIGSCFRADEHGRRHREEFTMLEFYARGMEYREQAQFTAGFVA 117

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
            AA                     E+ITV EAF RYA +                     
Sbjct: 118 EAARRVLGGESVVYRGREVDLGSHEFITVEEAFRRYAGVSTQEAE--------------- 162

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
                         D F  +++ KIEP LG    T L  YPA  ++LA +   +P   +R
Sbjct: 163 ------------RQDRFDELMVTKIEPELGRGRLTFLTDYPAGRASLARLRADNPAVAER 210

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +ELY   IEL NA  EL D  EQ+ RF   ++ +       YP   +F A L   +PQSS
Sbjct: 211 WELYIEGIELANAFGELTDAAEQKARFRAALEFRAAHGMHPYPAAVEFFAALDRGLPQSS 270

Query: 321 GIAMGFDRLVMLVTGANNINEV 342
           G AMG DRL M+   A++I +V
Sbjct: 271 GCAMGLDRLAMIFCDADDIGDV 292


>gi|149038241|gb|EDL92601.1| lysyl-tRNA synthetase, isoform CRA_a [Rattus norvegicus]
          Length = 499

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 92/262 (35%), Gaps = 25/262 (9%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P   +   +++  YR+R              + R+ I + +R +  E  F+EI++ 
Sbjct: 239 LHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETP 298

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG     + F T     + +   LY++ +PE   K L+  G ++++     +RN 
Sbjct: 299 MMNIIPGGAV-AKPFIT---YHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNE 354

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN--------VNC 159
                H PEFT  E+Y A+  Y  LM+    ++               +           
Sbjct: 355 GIDLTHNPEFTTCEFYMAYADYHDLMEITEKMLSGMVRSITGSYKITYHPDGPEGQAYEI 414

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +       I++ E   +   + L  T     +  R +L        +      T + +  
Sbjct: 415 DFTPPFRRISMVEELEKVLGVKLPETSLFETEETRKILDDICVARAVECPPPRTTARLLD 474

Query: 220 RILIEKIEPNLGINCCTILDRY 241
           +       P   +    +   Y
Sbjct: 475 KARDHACAPCGRVPRSDMHQPY 496


>gi|311086878|gb|ADP66959.1| lysyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 245

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 26/267 (9%)

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            K+LLA+    I+   H++RN E G  H PEFTMLEWY+   S ++ +            
Sbjct: 1   MKRLLASESGSIYQICHSFRNKELGRYHNPEFTMLEWYQPFCSMKKFI------------ 48

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
               K            ++ + ++  + F  +  ID       P   +   L+  +++  
Sbjct: 49  ----KEIDIFLQIILKCNKSDKVSYQDLFIDFLKID-------PLCANLLELHQISKKLK 97

Query: 206 IRV--AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
           +      ++  + +   +   KIEPN+G      +  +PA +++LA I   DPR ++RFE
Sbjct: 98  LDHLTHSENNLNKLIQLLFTLKIEPNIGKEKPLFVYHFPAEQASLAAINLKDPRISERFE 157

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
           ++   IEL N   EL+D  EQ+ RF ++ +E++ +      ID  FL+ L   +P  SG+
Sbjct: 158 IFFKGIELGNGFYELIDVNEQKKRFIRDNKERRSMNLPIRKIDNFFLSALSYGLPPCSGV 217

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQ 349
           A+G DRL+ML+    +I+EVI  P  +
Sbjct: 218 AIGLDRLIMLILNKKSIHEVIAFPVDR 244


>gi|20090536|ref|NP_616611.1| aspartyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|24212406|sp|Q8TQ68|SYD_METAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19915564|gb|AAM05091.1| aspartyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 444

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/344 (15%), Positives = 107/344 (31%), Gaps = 47/344 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                      R+    ++REYFV+N+FIE  +   +  +    T +   +       + 
Sbjct: 135 RRAETTAVFKIRHEALQAIREYFVKNKFIETATPKVVATATEGGTALFPIT-------YF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L+  G +++F     +R  E     H  E T ++   +   +  
Sbjct: 188 DREAFLNQSPQLFKQILMGGGFDRVFEIGPIFRAEEHDTRRHLNEATSIDVEVSFADHFD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   N++                           I   +A      ++L        +
Sbjct: 248 VMEILENLVAHIYTRV--------------------IENCKASLEILGVELKVPKTPFLK 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE----KIEPNLGINCCTILDRYPAPESA 247
                +         R      W D    +        +    G      +  +P     
Sbjct: 288 LTYDEVIEI---VNSRCEEKMHWGDDLGTLGEHTVGNYVYETTG-ESHYFIIDWPTEIKP 343

Query: 248 LA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                Y   P F+K F++    +EL +    +      + R E +               
Sbjct: 344 FYAMPYEDRPEFSKSFDMMHRTMELSSGAQRIHISELLKSRIESQGLNPDGF-------- 395

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           E +L      MP  +G  MG +R VM + G  NI + +  P  +
Sbjct: 396 EFYLKAFEYGMPPHAGWGMGCERFVMTMLGTENIRDTVLFPRDR 439


>gi|297588296|ref|ZP_06946939.1| asparagine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573669|gb|EFH92390.1| asparagine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 461

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 111/357 (31%), Gaps = 45/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+ +  ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 121 HLRPRTNTFNAVFRVRSRLAFAIHKFFNERGFVYVHTPIITGSDAEGAGEM--FRVTTLD 178

Query: 69  QD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            D             +  +     L  S +   +    A    ++ F   +R+       
Sbjct: 179 LDNIPKDDDGNVDFSQDFFSKSTNLTVSGQLQAEAYALA-FRNVYTFGPTFRSEHSNTPR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E        + +     +++R       + +          F+      + E
Sbjct: 238 HAAEFWMMEPEICFADLDDVCNLAEDMVRYII----KDVMENCEEEIKFFNSFVDKNLIE 293

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              + AN                      Q++G +  +   W         + +   +  
Sbjct: 294 RLTKVANKSFKKLTYTE-------AVEILQKSGEKFEYPVEWGMDLQTEHEKYLSEKVVD 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
                +  YP    A       D +     +L    I       EL+   ++  R+E   
Sbjct: 347 GPV-FVTDYPKEIKAFYMRLNDDNKTVAATDLLVPGI------GELIGGSQREERYELLD 399

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++  ++        + +L        +  G  +GF+R+VM +TG +NI +VI  P +
Sbjct: 400 KKMDELGFNKEEY-KWYLDLRKYGGVKHGGFGLGFERMVMYMTGMSNIRDVIPFPRT 455


>gi|164656537|ref|XP_001729396.1| hypothetical protein MGL_3431 [Malassezia globosa CBS 7966]
 gi|159103287|gb|EDP42182.1| hypothetical protein MGL_3431 [Malassezia globosa CBS 7966]
          Length = 575

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 113/360 (31%), Gaps = 46/360 (12%)

Query: 2   HQIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY 51
             +P       D     R                + I    RE+   N FIEI +  LQ 
Sbjct: 243 RPLPPIAL---DTRLDNRVLDLRTTTNQAIFRLNHGICRLFREFLENNGFIEIHTPKLQG 299

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
           +   E+    F  +    +      +L  SP+ + +  +AA   +++     +R  +   
Sbjct: 300 AA-TESGASVFKVDYFKGNA-----FLAQSPQLAKQMAIAADFGRVYEIGPVFRAEDSNT 353

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EFT L+   A + +   + D +N +         K +S +               
Sbjct: 354 NRHMTEFTGLDLEMAFQEHYHEVVDLLNQLFMYIFSELPKRYSAEIATVRRQYPA----- 408

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                     D     + P + D        + AG  V   D  S    R L + +    
Sbjct: 409 ----------DDFLVPEAPVRLDFREAIQMLRDAGYEVNDLDDLSTETERALGKIVRDKY 458

Query: 231 GINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +    +D++P             D R++  ++ +    E+ +    + D      R  
Sbjct: 459 KTD-FYAVDKFPLDIRPFYTMPDANDKRYSNSYDFFMRGQEILSGAQRVHDAKFLEERLA 517

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +      +I        + ++       P  +G  +G +R++ML  G  NI  V   P  
Sbjct: 518 Q-----AQIPVSAM---KHYVDAFRLGAPPHAGGGIGLERVLMLYLGLGNIRRVSLFPRD 569


>gi|167045666|gb|ABZ10314.1| putative tRNA synthetases class II (D, K and N) [uncultured marine
           crenarchaeote HF4000_APKG10L15]
          Length = 431

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 129/364 (35%), Gaps = 58/364 (15%)

Query: 2   HQIPSQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           H +P  P    + H   R                   R+ + +SLR+ F E +F EI + 
Sbjct: 103 HPLPIDPLGRLESHIDNRLNSRALDMRNQKTASIFKIRHHVLASLRKTFAEKKFTEITTP 162

Query: 48  -SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             +  +     ++          D+  K  YL  SP+   K+ +  G E++F  A  +R 
Sbjct: 163 KIIGSASEGGANL-------FSLDYFGKQAYLAQSPQLY-KEQMTIGLERVFEIASFYRA 214

Query: 107 GE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
            +     H  EFT ++   A   Y  +M    +++    +  ++     Q +        
Sbjct: 215 EKSHTGRHLSEFTSVDIEAAFMDYTDVMNVLEDLVFNTFKYVSENCKKEQEI-------- 266

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
                           +G  +  P+ P + + Y QA +   R      + D      +  
Sbjct: 267 ----------------IGNKITMPNGPFKKITYSQALEELNRKDAKLEFGDDLLDSHLRI 310

Query: 226 IEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           IE N        +  +P        +    +P  ++ F+L    +EL +    L +P + 
Sbjct: 311 IEENHP--NFYFITDWPIKLKPFYIMEKEDNPELSESFDLQFGYLELSSGGSRLHNPEKI 368

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           + R  ++  +  K        D         MP  +G  +G +RL+ ++ G +N+ EVI 
Sbjct: 369 KMRLSEQNLDPAKFSEHLQAFDW-------GMPPHAGWGLGLERLLTVILGIDNVREVIL 421

Query: 345 TPFS 348
            P  
Sbjct: 422 YPRD 425


>gi|45187834|ref|NP_984057.1| ADL039Cp [Ashbya gossypii ATCC 10895]
 gi|44982618|gb|AAS51881.1| ADL039Cp [Ashbya gossypii ATCC 10895]
          Length = 556

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/333 (19%), Positives = 111/333 (33%), Gaps = 29/333 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     +  +    RE+F    F EI +  L  SP +E     F  +    +      YL
Sbjct: 244 QAIFRIKAGVCGLFREFFQSRNFTEIHTPKLLASP-SEGGANVFEVKYFKGNA-----YL 297

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+F  ++L+AA  E++F  A  +R        H  EFT ++   A E +   + + M
Sbjct: 298 AQSPQFYKQQLIAADFERVFEVAPVFRAENSNTHRHMTEFTGVDLEMAFEEHYHEVIEVM 357

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
             +        +K F+ +          E                               
Sbjct: 358 GEMFMFVFTELKKRFAREIAQVRKQYPVEEFKF-------------PADGKMVILHYKEG 404

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
               ++AG  +   D  S    R L + +      +   ILD++PA          PADP
Sbjct: 405 IAMLREAGKEIGDFDDLSTENERFLGKLVREKYDTD-FYILDKFPAELRPFYTMPDPADP 463

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
           R++  ++ +    E+ +    + DP   R R       K           +D+       
Sbjct: 464 RYSNSYDFFMRGEEIMSGAQRIHDPELLRER------MKHHGLQPEDAGFKDYCDAFTYG 517

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P  +G  +G +R+VM      NI      P  
Sbjct: 518 CPPHAGGGIGLERIVMFYLDLKNIRRATLFPRD 550


>gi|297526525|ref|YP_003668549.1| aspartyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255441|gb|ADI31650.1| aspartyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 443

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 56/369 (15%), Positives = 111/369 (30%), Gaps = 56/369 (15%)

Query: 1   MHQIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDS 46
           +  +P           D   + R               R  I  + R+YF  N FIEI +
Sbjct: 110 LEPLPVDTVGKVPALLDTRIKYRYLLVRNPVEKAVFRIRAGIIEAARQYFNNNGFIEIHT 169

Query: 47  MSLQYSP--GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
             +  +   G  T        L    +     YL  SP+   + L+A    ++F     +
Sbjct: 170 PKIVAAGAEGGAT--------LFPIQYFDNKAYLSQSPQLYKQMLIAG-FPRVFEITPYF 220

Query: 105 RNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R  +     H  E   ++  +   +  + + + +  +        +K +  +        
Sbjct: 221 RAEKFNTTRHLNESWGIDAEQGFINGVEDVLNTLEDLIVYINDYIRKNYVEEQ------- 273

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
                            ++        +          +  G+ V+  +  SD   + L 
Sbjct: 274 ------------EILGTEIEKLEKPFKRLRFEEAIDLLRSEGLEVSEGEDLSDAAEKKLG 321

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E +E          +  +P   +    +   D   T++F+L    +E+ +         +
Sbjct: 322 EIMEEKGY--KIYFIIGFPWQSTGFYYMREEDGYHTRKFDLDYKGLEIASGGQREHRYDK 379

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
                      K K  N        +L      MP   G  +G +RL+M + G  NI E 
Sbjct: 380 LV------SALKDKGLNPEDF--AFYLEAFKYGMPPHGGFGLGIERLMMKMLGLENIREA 431

Query: 343 IWTPFSQSN 351
           I     ++ 
Sbjct: 432 ILFVRDRTR 440


>gi|84488964|ref|YP_447196.1| aspartyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|97196728|sp|Q2NHT0|SYD_METST RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84372283|gb|ABC56553.1| AspS [Methanosphaera stadtmanae DSM 3091]
          Length = 439

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/352 (18%), Positives = 116/352 (32%), Gaps = 57/352 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIR 60
           D     R               ++ +  + R YF +N F EI +  L  S   G      
Sbjct: 125 DTRLDSRFMDLRKHDVSAIFKIKSQMLHTARNYFYDNDFTEITTPKLVASATEGG----- 179

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTM 119
              TEL    +  K  +L  SP+   + ++A G + +F     +R  E     H  E   
Sbjct: 180 ---TELFPITYFEKEAFLGQSPQLYKQMMMATGLDNVFEIGQIFRAEEHDTLRHLNEALS 236

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++   + +S    M     +I+      +                             ++
Sbjct: 237 IDAEMSFKSQTDAMNTLEELIKRILSDISTNC----------------------QKELSD 274

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +D    LD P +P   + Y +          +  + +  +R   + +   +G      + 
Sbjct: 275 LDH--ELDIPTEPFPIVTYEEVIDIVNSRDVEMNYGEDLNRAAEKVLGETMGS--YYFIT 330

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
            +P             D   +  F+L   ++EL +    + D          +++ K   
Sbjct: 331 EWPTAIKPFYVMPNSDDAEKSTAFDLMYRDLELSSGAQRIHDYDLLYS----QIEAKDLN 386

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +      E +L      MP  SG  MG DRL M++TGA NI E +  P  +
Sbjct: 387 PDS----FEKYLQAFKYGMPPHSGWGMGADRLTMVITGAKNIRETVLFPRDR 434


>gi|66523683|ref|XP_393437.2| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Apis mellifera]
          Length = 533

 Score =  172 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/351 (17%), Positives = 120/351 (34%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  I    R+      F+EI +  +  +  +E    
Sbjct: 207 NQDTRLDNRVLDLRTPANQAIYRVEAAICKLFRDILTNKGFVEIHTPKIISAA-SEGGAN 265

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  +AA  +K+F     +R  +     H  EF  
Sbjct: 266 VFTVSYFKGNA-----YLAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 320

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                +      V         Y    EA  +  N
Sbjct: 321 LDLEMAFKYHYHEVV---------------ETIGQLFVEIFKGLRNNYAAEIEAVRQQYN 365

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    LD P + + +       +AG+ +  +D  S    ++L + ++     +   ILD
Sbjct: 366 VEPFKFLDPPLKLEYNDAIELLAEAGVTLGEEDDLSTPDEKLLGKLVKAKYDTD-FYILD 424

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R      +   I
Sbjct: 425 KYPLSVRPFYTMPDPNNPKLSNSYDMFMRGEEIISGAQRIHDPELLTER-----AKYHGI 479

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+VML  G +NI +V   P  
Sbjct: 480 DLEKI---KSYIDAFKYGCPPHAGGGIGMERVVMLYLGLDNIRKVSMFPRD 527


>gi|3248957|gb|AAD09938.1| lysyl-tRNA synthetase [Coxiella burnetii]
          Length = 209

 Score =  172 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 78/201 (38%), Gaps = 8/201 (3%)

Query: 152 FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
             +Q V  +       +++ +A  ++        +              A +  I     
Sbjct: 16  IKYQGVRIDLNKPFPRLSLRDAILQF-----NPGITPDQIDHLETARELAHKYEIATPAH 70

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
                I + +    +E    +     +  +P   S L+     +   T RFE Y    E+
Sbjct: 71  YGLGKIQTELFETLVEEK--LQQPIFITHFPKELSPLSRANEENDFITDRFEFYVGGREI 128

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
            N   EL DP +Q  RF ++++ +     E    DED++  L   +P ++G  +G DRLV
Sbjct: 129 ANGFSELNDPEDQAARFREQLKARNAGDLEAMSFDEDYITALEYGLPPTAGEGIGIDRLV 188

Query: 331 MLVTGANNINEVIWTPFSQSN 351
           ML T   +I +VI  P  +S 
Sbjct: 189 MLFTDNASIRDVILFPLLRSK 209


>gi|68061405|ref|XP_672702.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56489988|emb|CAI01907.1| hypothetical protein PB300444.00.0 [Plasmodium berghei]
          Length = 426

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 71/315 (22%), Positives = 132/315 (41%), Gaps = 33/315 (10%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D  Y+ R               ++ R  I   +R + ++ +++E+D+ 
Sbjct: 127 LLPLPDKHKGMKDIEYKYRKRYLDFLTNSEQKEKIITRFNIIQEIRRFLLKKKYLEVDTP 186

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKK-LLAAGEEKIFCFAHAWRN 106
            LQ   G  +  + F T L     +   LYL+ +PE   KK +++   EKIF  +  +RN
Sbjct: 187 MLQLVAGGAS-AKPFETHLKS---LDLVLYLRIAPELFLKKLIISGISEKIFELSKCFRN 242

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                +H PEFTMLE Y+++ +Y+ +MK    +I+       +KI      +    ++ E
Sbjct: 243 EGLSTIHNPEFTMLEIYKSYANYKYMMKFTKKLIKN----VAKKISISSPYSFILQNKWE 298

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD---TWSDIFSRILI 223
             +  +    Y +I+                Y +A+   I    +     W  +   +  
Sbjct: 299 KKSFIKIIKEYTSINFLK-------LSFDQAYEKAKDLNITFDQEKSALNWGLVVEEVFK 351

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           +KIEP L  +   I    P+  S L+     + + ++RFE Y   +E+ N   E  + I 
Sbjct: 352 KKIEPFLPSHPIHI-YHLPSETSPLSKTLNKNKKLSERFETYIGKMEIANGYSEEANTII 410

Query: 284 QRHRFEKEMQEKKKI 298
           Q  +F  +   K K 
Sbjct: 411 QEKKFWLQRYLKIKF 425


>gi|188996701|ref|YP_001930952.1| tRNA synthetase class II (D K and N) [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931768|gb|ACD66398.1| tRNA synthetase class II (D K and N) [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 312

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 100/314 (31%), Positives = 153/314 (48%), Gaps = 13/314 (4%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           + I  S+REYF     IE+ +  L+     + +I      +  +       +L TSPE S
Sbjct: 9   STIIKSIREYFYRTGSIEVFTDILRDFSNLDNNIYPVELFVYDERSQPIRKFLHTSPEPS 68

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            KK+L+  +  IF     +RN E  C H+ EFTMLEWYR     + LM+D  NI   +A 
Sbjct: 69  MKKILSEIKTDIFQITKVFRNYEGSCKHKIEFTMLEWYRVGYDLDDLMEDTQNIFIESAI 128

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
              +K             + + ITV EAF  Y  I        P+  D+   +L+ +++ 
Sbjct: 129 SLYKKPKIKYKGREYNLLDWQKITVDEAFYIYTGI-------YPENIDKMNKFLKEKESY 181

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
            + + D  W ++F RI    +EPNLG    T +  YP   SA A +        KRFE Y
Sbjct: 182 FKESQD--WEELFFRIYAFYVEPNLGKEKPTFIYDYPPQLSAFAKVKD---GKGKRFEAY 236

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
              IEL N   EL DP+E   R ++++++KKK     YP+D +F+     +P+ SG ++G
Sbjct: 237 INGIELVNGYHELNDPVELESRLKQDIEKKKKEG-FDYPLDTEFIKASQNLPECSGASLG 295

Query: 326 FDRLVMLVTGANNI 339
            DRL+M++    +I
Sbjct: 296 IDRLIMILLDLESI 309


>gi|308069459|ref|YP_003871064.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase)
           [Paenibacillus polymyxa E681]
 gi|305858738|gb|ADM70526.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase)
           [Paenibacillus polymyxa E681]
          Length = 431

 Score =  172 bits (435), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 63/349 (18%), Positives = 113/349 (32%), Gaps = 43/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++R  L+ R  I  +++E+F  N F ++D   L  S    T      
Sbjct: 116 MDHRHLWLRSA--KQRAVLIVRAEIIRAVQEFFNGNGFTKVDPPILTPSSAEGT------ 167

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL    +  +  YL  S +    +  A    K++ F   +R  +     H  EF M+E 
Sbjct: 168 TELFHIKYFDEDAYLTQSGQLYM-EAAAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEP 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E+ ++     +    +   +             S+ E I        Y     
Sbjct: 227 EMAFVDHEESLRVQEQFVSHIVQSVLKNCAKELETIGRDVSKLEQIQGEFPRITY----- 281

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                     D  + +LQ +   I       W + F       I      N    +  +P
Sbjct: 282 ----------DEAIAFLQGEGFDIP------WGEDFGAPHETAIAERY--NKPVFITHWP 323

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
               +      P  P      ++ A     E+      + DP     RF +    ++   
Sbjct: 324 THIKAFYMKPDPTRPEVVLCADMIAPEGYGEIIGGSQRIDDPALMEERFNEHNLAREA-- 381

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              + +D   L         SG  +G +R V  + G +++ E I  P  
Sbjct: 382 -YQWYMD---LRT-YGTVPHSGFGLGLERTVAWICGLDHVRETIPFPRM 425


>gi|238879778|gb|EEQ43416.1| aspartyl-tRNA synthetase [Candida albicans WO-1]
          Length = 578

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 115/361 (31%), Gaps = 45/361 (12%)

Query: 6   SQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQ 50
           S+       +   R                   ++ +    RE+ ++  F EI +   + 
Sbjct: 239 SEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKGFTEIHTPKIIG 298

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
            +    ++       +   ++ +   +L  SP+   ++L+AA  EK+F  A  +R     
Sbjct: 299 AASEGGSN-------VFEINYFKGSAFLAQSPQLYKQQLIAADFEKVFEIAPVFRAENSN 351

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EFT L+   A E +   + + +  +        +  FS +          E   
Sbjct: 352 THRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKTRFSKEIATVRKQFPVEEF- 410

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
                                +          ++AG  V   +  S    ++L + +   
Sbjct: 411 ------------KIPKDGKMVKLHFKEGIAMLREAGKEVDDFEDLSTENEKLLGKLVREK 458

Query: 230 LGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   ILD++P             DPR++  ++ +    E+ +    + DP     R 
Sbjct: 459 YDTD-FYILDKFPLAVRPFYTMPDSEDPRYSNSYDFFMRGEEILSGAQRIHDPKLLTQRM 517

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++         +   P   D++       P  +G  +G +R+VM      NI      P 
Sbjct: 518 KEHEV------DPNVPGLNDYVEAFTYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPR 571

Query: 348 S 348
            
Sbjct: 572 D 572


>gi|268325663|emb|CBH39251.1| aspartyl-tRNA synthetase [uncultured archaeon]
          Length = 437

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/340 (16%), Positives = 116/340 (34%), Gaps = 49/340 (14%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
              R +   + R++   ++R++F E   IEI++   +  +    T +   S       + 
Sbjct: 138 RTERTKHIFMIRSLALKAIRDFFDERGLIEINTPKIVSAATEGGTALFPIS-------YF 190

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L+A+G ++++  A  +R  E     H  E T ++   A  S ++
Sbjct: 191 EREAFLNQSPQLYKQILMASGFDRVYEIAPIFRAEEHDTTKHLNEATSVDVELAFVSDKE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI-DLGTTLDNPD 190
           +M     +I                                    Y  +  L   L+ P 
Sbjct: 251 VMALLEELIASIYTKV---------------------------VDYPGLAKLKVKLEVPA 283

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
            P R + Y +A +          W +         +   +G      +  +P        
Sbjct: 284 IPFRRITYAEAIELLSGEGEQIEWGEDIGTSAERTLGKIIGE--LYFITDWPCAIKPFYA 341

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             PA       F+L    +EL +    +          +++++ K           E +L
Sbjct: 342 Q-PAAEGICNAFDLMHPRLELSSGSQRVHSY----ELLKRQIETK---GLSADSF-EFYL 392

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                 MP  +G  +G +RL+M +    NI +V+  P  +
Sbjct: 393 DAFRYGMPPHAGWGLGVERLLMSMLEVENIRDVVLFPRDR 432


>gi|121998757|ref|YP_001003544.1| lysine--tRNA ligase [Halorhodospira halophila SL1]
 gi|121590162|gb|ABM62742.1| Lysine--tRNA ligase [Halorhodospira halophila SL1]
          Length = 316

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 92/311 (29%), Positives = 134/311 (43%), Gaps = 26/311 (8%)

Query: 29  QSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKK 88
            + +R +F E   +E+    L  +   +  + +               YLQTSPE + K 
Sbjct: 22  LARIRGFFAERGVVEVQPPCLGPAA-MDPALESIPVPGAA--ADGDAAYLQTSPESAMKA 78

Query: 89  LLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           +LAAG   I+    AWR GE+G  H  EFT+LEWYR    + +LM               
Sbjct: 79  MLAAGSSDIYYLGPAWRGGERGRWHATEFTLLEWYRIGFDHHRLM--------------- 123

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
               S            E  +  EAF RYA +D     D+  +       +    A    
Sbjct: 124 -DEVSALAALLVGDRPVERWSYQEAFRRYAGVDPLDDADDALRDALADQGIDLHGAA--- 179

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
               +  D    +L   + P LG    T L  +PA ++ALA +  ADPR  +RFE +   
Sbjct: 180 ---PSRDDALDLLLSHAVGPALGHGQLTFLYGFPASQAALARLDDADPRTARRFECFIDG 236

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFD 327
           +E+ N   EL DP  QR RFE E  E++      Y +DE  L  L   +P  +G+A+G D
Sbjct: 237 LEIANGYHELTDPAAQRARFEAEQAERRGAGQPVYDLDERLLGALERGVPDCAGVALGVD 296

Query: 328 RLVMLVTGANN 338
           RL+ +  GA +
Sbjct: 297 RLLAVALGAES 307


>gi|68485621|ref|XP_713293.1| probable aspartate-tRNA synthetase [Candida albicans SC5314]
 gi|68485724|ref|XP_713240.1| probable aspartate-tRNA synthetase [Candida albicans SC5314]
 gi|46434721|gb|EAK94123.1| probable aspartate-tRNA synthetase [Candida albicans SC5314]
 gi|46434775|gb|EAK94176.1| probable aspartate-tRNA synthetase [Candida albicans SC5314]
          Length = 578

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 115/361 (31%), Gaps = 45/361 (12%)

Query: 6   SQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQ 50
           S+       +   R                   ++ +    RE+ ++  F EI +   + 
Sbjct: 239 SEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKGFTEIHTPKIIG 298

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
            +    ++       +   ++ +   +L  SP+   ++L+AA  EK+F  A  +R     
Sbjct: 299 AASEGGSN-------VFEINYFKGSAFLAQSPQLYKQQLIAADFEKVFEIAPVFRAENSN 351

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EFT L+   A E +   + + +  +        +  FS +          E   
Sbjct: 352 THRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKTRFSKEIATVRKQFPVEEF- 410

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
                                +          ++AG  V   +  S    ++L + +   
Sbjct: 411 ------------KIPKDGKMVKLHFKEGIAMLREAGKEVDDFEDLSTENEKLLGKLVREK 458

Query: 230 LGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   ILD++P             DPR++  ++ +    E+ +    + DP     R 
Sbjct: 459 YDTD-FYILDKFPLAVRPFYTMPDSEDPRYSNSYDFFMRGEEILSGAQRIHDPKLLTQRM 517

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++         +   P   D++       P  +G  +G +R+VM      NI      P 
Sbjct: 518 KEHEV------DPNVPGLNDYVEAFTYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPR 571

Query: 348 S 348
            
Sbjct: 572 D 572


>gi|325294519|ref|YP_004281033.1| Lysine--tRNA ligase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064967|gb|ADY72974.1| Lysine--tRNA ligase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 315

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 87/329 (26%), Positives = 150/329 (45%), Gaps = 33/329 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ +   +R +F    FIE+++  +      ++++             +   +L 
Sbjct: 3   EILKLRSKLLKVVRGFFELQGFIEVETPLMVPYENPDSNVVNVKVSFSNFSGKKFNWFLH 62

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF  K+++  G  +I+  +  +RNGE    H  EFTM+EWYR    Y++ M++ + +
Sbjct: 63  TSPEFFMKRIIWHGIPRIYQISKVFRNGEITESHNVEFTMVEWYRTGADYKKGMEETLEL 122

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++   + A ++  S++    +        TV EAF  +A +      +   +  +   Y 
Sbjct: 123 LKECVKAAKKEELSYR-GKRSHLHGYISFTVEEAFREFAGVKDIFDEEEVLKVSKEKEYE 181

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANIYPADPRF 258
            A                F ++L++K+EP          L  YPA  SA+A +      +
Sbjct: 182 SA----------------FFKLLVDKVEPALAEFQVPVFLYNYPAKFSAMAKVK---GNY 222

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE--M 316
            +RFELY C +EL N   EL D    + +F       +K       +D+ FL  L E  +
Sbjct: 223 AERFELYVCGLELANGYTELTDFESYKKKF------FEKG---KQAVDKGFLKLLKEKPL 273

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           P   G+A+GFDR++ML+TG   I+EVI  
Sbjct: 274 PSCEGVALGFDRVLMLITGKK-IHEVIPF 301


>gi|15487831|gb|AAL00964.1|AF401676_1 L-lysyl tRNA synthetase [Lactobacillus sakei]
          Length = 141

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 3/139 (2%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           I +    E +E    +   T +  +P   S LA     D RFT R+EL+    E  NA  
Sbjct: 1   IINAFFEEFVEDT--LVQPTFIYGHPVEISPLAKKNAEDDRFTDRWELFMHGNEYANAFT 58

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL DPI+QR RFE + +E++   +E   IDED++  L   MP + G+ +G DRLVML+T 
Sbjct: 59  ELNDPIDQRERFEAQAKERENGNDEAEGIDEDYVEALEYGMPPTGGLGIGIDRLVMLLTD 118

Query: 336 ANNINEVIWTPFSQSNQEE 354
           A +I +V+  P  + +++E
Sbjct: 119 AASIRDVLLFPTMRPDKQE 137


>gi|193084078|gb|ACF09748.1| aspartyl-tRNA synthetase [uncultured marine group III euryarchaeote
           AD1000-40-D7]
          Length = 427

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 108/332 (32%), Gaps = 46/332 (13%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
              R  I  ++ ++    +F+E+ +   +  +           T L    +  +  YL  
Sbjct: 137 FQIRAAISGAVHKHLRREKFLEVQTPKIIASATEGG-------TSLFEMKYFDRTAYLAQ 189

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+   + L+  G E+++    A+R  E     H  EF  ++   +    + +M     +
Sbjct: 190 SPQLYKQMLMGGGLERVYEVGPAFRAEEHNTPRHLNEFISIDIEMSFADDDVVMGVMERL 249

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I  AA    ++                             I+         +        
Sbjct: 250 IDTAARAVAKET---------------------EALETLGIEPIELELPLPRITYDEAVE 288

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            AQ           W +  S      I   +  N    + ++P            DP+++
Sbjct: 289 MAQGK-------AEWGEDLSMEATRAIAKQM--NGFYFITKWPLSLKPFYIQPDEDPKYS 339

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQS 319
           K F+     +E+ +    + D    R R +++  +        + +D         MP  
Sbjct: 340 KGFDFMYNEVEMTSGGQRVHDVNLLRKRLKEQGLDPDGFN---HYLDPF----RYGMPPH 392

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           +G  +G DRL M+  GA N+ E +  P  ++ 
Sbjct: 393 AGWGLGLDRLAMIFAGAKNVRECVLFPRDRTR 424


>gi|319789471|ref|YP_004151104.1| tRNA synthetase class II (D K and N) [Thermovibrio ammonificans
           HB-1]
 gi|317113973|gb|ADU96463.1| tRNA synthetase class II (D K and N) [Thermovibrio ammonificans
           HB-1]
          Length = 304

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 100/329 (30%), Positives = 154/329 (46%), Gaps = 43/329 (13%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L+KR     ++R +F    F+E+++ +L      + ++             R   YL 
Sbjct: 3   EILIKRAKALEAVRRFFSSRSFVEVETPNLVPYKNPDDNVENVRATFSDWRGRRFDWYLH 62

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPEF  K+LL  G E+IF     +R+GE G LH  EFTM+EWYR    Y   M++ +++
Sbjct: 63  TSPEFFMKRLLWHGMERIFQVCKVYRDGETGPLHSVEFTMVEWYRVGADYRAGMEETLSL 122

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I   A+      FS          EP Y+TV EA+  +A ++L                L
Sbjct: 123 INEVAKALGASPFS----------EPVYLTVEEAYKEFAGVELSN------------REL 160

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANIYPADPRF 258
            A++ G       ++ + F R+L+EK+EP   G +   +L  YP   SA+A     +   
Sbjct: 161 VAERFG-----SGSFEEAFFRLLVEKVEPALSGFDSPVVLYDYPEEFSAVA---KVEGGT 212

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE--M 316
            +RFE+Y   +E+ N   EL    E +  F       KK   E    D   L  L E  +
Sbjct: 213 ARRFEVYLKGVEIANGYTELTTYSEYKRVF------SKKGGAE----DYGLLKLLEERPL 262

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           P   G+A+GFDRLVM++TG++ + EV+  
Sbjct: 263 PPCEGVALGFDRLVMVLTGSSCLKEVMPF 291


>gi|219850950|ref|YP_002465382.1| aspartyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219545209|gb|ACL15659.1| aspartyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 424

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/343 (16%), Positives = 115/343 (33%), Gaps = 45/343 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              R       R+ +  +++++  + +F +I +  +  +   G         TEL    +
Sbjct: 119 RRPRVAAVFEIRSAVLHAVQQFLHKREFTQITTPKIVAAATEGG--------TELFPIAY 170

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + ++AAG EK++     +R  E     H  E T ++   +   + 
Sbjct: 171 FEKEAFLNQSPQLYKQMMMAAGFEKVYEIGPIFRAEEHNTTKHLNEATSIDVEVSFADHY 230

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M     +I    E  +Q                   T  +  A     +         
Sbjct: 231 DMMTLLEEMIITTYEHISQ-------------------TCQDQLANLEIEEFEVPKGPFT 271

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA- 249
           +         A +   ++     + D         +   +G      +  +P+       
Sbjct: 272 RLPYAEAIEIAAK---KIDEPIKYGDDLGSAAERAVGEEMG--AHYFITDWPSSIRPYYA 326

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
             Y  DP   K F+L    +EL +    +     Q      ++  K  +  E++   E +
Sbjct: 327 MPYEDDPSICKAFDLMHPRMELSSGAQRVH----QYDLLVSQIIAK-GLSPESF---EFY 378

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           L      MP  +G  +G +RLVM + G  NI E +  P  +  
Sbjct: 379 LRPFRYGMPPHAGFGVGAERLVMTMLGLQNIREAVLFPRDRHR 421


>gi|241958322|ref|XP_002421880.1| aspartyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
 gi|223645225|emb|CAX39824.1| aspartyl-tRNA synthetase, cytoplasmic, putative [Candida
           dubliniensis CD36]
          Length = 578

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 114/361 (31%), Gaps = 45/361 (12%)

Query: 6   SQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQ 50
           S+       +   R                   ++ +    RE+ ++  F EI +   + 
Sbjct: 239 SEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKGFTEIHTPKIIG 298

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
            +    ++       +   ++ +   +L  SP+   ++L+AA  EK+F  A  +R     
Sbjct: 299 AASEGGSN-------VFEINYFKGSAFLAQSPQLYKQQLIAADFEKVFEIAPVFRAENSN 351

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EFT L+   A E +   + + +  +        +  FS +          E   
Sbjct: 352 THRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKTRFSKEIATVRKQFPVEEF- 410

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
                                +          ++AG  V   +  S    ++L   +   
Sbjct: 411 ------------KIPKDGKMVKLHFKEGIAMLREAGKDVDDFEDLSTENEKLLGRLVREK 458

Query: 230 LGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   ILD++P             DPR++  ++ +    E+ +    + DP     R 
Sbjct: 459 YDTD-FYILDKFPLAVRPFYTMPDSEDPRYSNSYDFFMRGEEILSGAQRIHDPKLLTQRM 517

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++         +   P   D++       P  +G  +G +R+VM      NI      P 
Sbjct: 518 KEHEV------DPNVPGLNDYVDAFTYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPR 571

Query: 348 S 348
            
Sbjct: 572 D 572


>gi|167043278|gb|ABZ07984.1| putative tRNA synthetases class II (D, K and N) [uncultured marine
           crenarchaeote HF4000_ANIW141M12]
          Length = 431

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 131/365 (35%), Gaps = 60/365 (16%)

Query: 2   HQIPSQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           H +P  P    + H   R                   R+ + +SLR+ F+E +F EI + 
Sbjct: 103 HPLPIDPLGRLESHIDNRLNSRALDMRNQKTASIFKIRHHVLASLRKIFLEKKFTEITTP 162

Query: 48  -SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             +  +     ++          D+  K  YL  SP+   K+ +  G E++F  A  +R 
Sbjct: 163 KIIGSASEGGANL-------FSLDYFGKQAYLAQSPQLY-KEQMTIGLERVFEIASFYRA 214

Query: 107 GE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
            +     H  EFT ++   A   Y  +M    +++    +  ++     Q +        
Sbjct: 215 EKSHTGRHLSEFTSVDIEAAFMDYTDVMNILEDLVLNTFKYVSENCKEEQEI-------- 266

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLY-LQAQQAGIRVAHDDTWSDIFSRILIE 224
                           +G  +  P+ P + + Y    ++   + A  +   D+    L  
Sbjct: 267 ----------------IGNKITIPNGPFKKITYSQVLEELNRKDAKLEFGDDLLDSHLRI 310

Query: 225 KIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIE 283
             E + G      +  +P        +    +P  ++ F+L    +EL +    L +P +
Sbjct: 311 LEENHPGF---YFITDWPIKLKPFYIMEKEDNPELSESFDLQYGYLELSSGGSRLHNPEK 367

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
            + R  ++  +  K        D         MP  +G  +G +RL+ ++ G +N+ EVI
Sbjct: 368 IKIRLSEQNLDPAKFSEHLQAFDW-------GMPPHAGWGLGLERLLTVILGIDNVREVI 420

Query: 344 WTPFS 348
             P  
Sbjct: 421 LYPRD 425


>gi|330507681|ref|YP_004384109.1| aspartyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928489|gb|AEB68291.1| aspartyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 434

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/353 (17%), Positives = 117/353 (33%), Gaps = 58/353 (16%)

Query: 13  DFHYRRRPFLLKR----------NMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIR 60
           D     R   ++R          + +  SLR+YF +   +E+ +  +  +   G      
Sbjct: 119 DTRLDSRFMDIRRPCVLAAFEIESAVLCSLRDYFHKKGIVEVFTPKIVAAATEGG----- 173

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTM 119
              T+L    +  K  +L  SP+   + L+ AG ++++     +R  E     H  E   
Sbjct: 174 ---TDLFPISYFEKEAFLNQSPQLYKQMLMGAGMDRVYEIGPIFRAEEHDTRRHLNEAIS 230

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++   +    + +M+     +  A                           A+   R   
Sbjct: 231 IDLEVSFADDKDVMEILEEAVAGAYSYV-----------------------ADNCRRQLE 267

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQA-GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
           + L   L+ P  P + + Y +A +    +      W D         +  ++G      L
Sbjct: 268 V-LNMELEVPRLPFKRITYTRALELAEEKAGARMQWGDDLDTETERFLGESIGE--HYFL 324

Query: 239 DRYPAPESALAN-IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
             +P+         Y   P   + F+L    +EL +    + D      R       K+K
Sbjct: 325 IDWPSSIKPYYTLPYEDKPEICRGFDLMHPRMELASGAQRVHDYSLLVER------IKEK 378

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +      E +L      MP  +G  +G  RLVM +    NI + +  P  +
Sbjct: 379 GLDPDGF--EFYLRAFRYGMPPHAGWGLGLSRLVMTMLNLENIRDAVIFPRDR 429


>gi|242398426|ref|YP_002993850.1| Aspartyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242264819|gb|ACS89501.1| Aspartyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 438

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 120/368 (32%), Gaps = 59/368 (16%)

Query: 3   QIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM- 47
            +P  P        D     R               R+    ++R++F    F+EI +  
Sbjct: 104 PLPLDPTGKVKAELDTRLDNRFMDLRRPEIMAIFKIRSSTFRAVRDFFHNEGFVEIHTPK 163

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +           TEL    +  K  +L  SP+   + ++A+G +++F  A  +R  
Sbjct: 164 IIATATEGG-------TELFPMKYFEKDAFLAQSPQLYKQIMMASGLDRVFEIAPIFRAE 216

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  E   ++   A    E  +   +  +   A    ++    +           
Sbjct: 217 EHNTTRHLNEAWSIDGEMAFIEDEDEVMKLLEHLITYAVNYVRENNEKELQTL------- 269

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS----RIL 222
                           G  L+ P  P R + Y +A +    +  + +W +       ++L
Sbjct: 270 ----------------GFELEEPKLPFRRVTYTEALEILRDLGKEISWGEDIDTEGEKLL 313

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
            + I+ N   +   I     + +      Y   P  ++ F+L    IE+ +         
Sbjct: 314 GQYIKENYDEDLYFIYQYPSSAKPFYIMRYDNKPEISRSFDLEYRGIEITSGGQREHRYE 373

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
           + + +  ++    +            +L      MP   G  +G +RL+  +    NI E
Sbjct: 374 KLKAQIAEQGLNVESFD--------FYLKAFRYGMPPHGGFGLGAERLIKQMLNLGNIRE 425

Query: 342 VIWTPFSQ 349
           V+  P  +
Sbjct: 426 VMLFPRDR 433


>gi|226312103|ref|YP_002771997.1| asparaginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226095051|dbj|BAH43493.1| asparaginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 429

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 112/349 (32%), Gaps = 43/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+R  +  R+ +  ++ E+F EN F+++D   L  +    T      
Sbjct: 114 MDHRHLWLRS--PRQRAVMAVRSEVIRAMYEFFHENGFVKVDPPILTPTSAEGT------ 165

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T L    +  +  YL  S +    +  A    +++ F   +R  +     H  EF M+E 
Sbjct: 166 TNLFHTKYFDEDAYLSQSGQLYM-EAAAMALGRVYSFGPTFRAEKSKTRRHLIEFWMIEP 224

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E+ ++     +    +   +             ++ + +T             
Sbjct: 225 EMAFVDHEENLRIQEAFVSHVVQSVLKNCERELKTLERDTTKLQNVTG------------ 272

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                        + Y  A +       +  W D F       I  +   +    +  YP
Sbjct: 273 ---------SFPRISYDDAIKLLQEKGSEIKWGDDFGAPDETMIADH--FDKPVFITHYP 321

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
               +     +P  P      ++ A     E+      + DP     RF +      ++ 
Sbjct: 322 TEIKAFYMKPHPERPEVVLCADMIAPEGYGEIIGGSQRIDDPELLEKRFAE-----HELS 376

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y    D           SG  +G +R +  + G +++ E I  P  
Sbjct: 377 EEAYRWYMDLRK--YGTVPHSGFGLGLERTIAWICGLDHVRETIPFPRM 423


>gi|328766451|gb|EGF76505.1| hypothetical protein BATDEDRAFT_14798 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 531

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 114/337 (33%), Gaps = 41/337 (12%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     +  +    RE+     F+EI +  L  +  +E     F        + +   +L
Sbjct: 223 QAIFRIQAGVSKLFREFLDNKDFVEIHTPKLIGAA-SEGGANVFRV-----SYFKGCGFL 276

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   + ++ A  E+++  A  +R        H  EF  L+   A + +   + D +
Sbjct: 277 AQSPQLYKQMMVCADFERVYEIAPVFRAENSQTHRHMTEFMGLDMEMAFQEHYHEVLDVL 336

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +  +     +  +  +          E     E   R                +    
Sbjct: 337 DGLFVSIFQGLESRYKKELATIQRQYPYEPFMFLEKSLR---------------LEFPEA 381

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
               + AG+ +   D ++    R+L + ++     +   ILD++P           P+ P
Sbjct: 382 IAMLRGAGVEIGDFDDFNTAQERLLGKLVKEKYKTD-FFILDKFPLAVRPFYTMPDPSRP 440

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFLAC 312
            ++  ++ +    E+ +    + D    + R E+            + +D    + ++  
Sbjct: 441 GYSNSYDFFVRGEEILSGAQRIHDSAFLKQRAEE------------HGVDISTIQPYIDA 488

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                P  +G  +G +R+VML     NI +    P  
Sbjct: 489 FKYGAPPHAGGGIGLERVVMLYLDLGNIRKTSLFPRD 525


>gi|296204889|ref|XP_002749521.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 1
           [Callithrix jacchus]
          Length = 501

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|46447164|ref|YP_008529.1| putative lysyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46400805|emb|CAF24254.1| putative lysyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 300

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 85/313 (27%), Positives = 137/313 (43%), Gaps = 25/313 (7%)

Query: 33  REYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAA 92
           R++F   Q +E+D   L      + HI      +    H ++  YL +SPE+  K+LLA 
Sbjct: 6   RQFFAARQILEVDCPCLSLRASIDAHIDL----IPALYHQQETCYLHSSPEYGMKRLLAE 61

Query: 93  GEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
           G    +  +H +R+GE    H PEF M EWYR     EQ++++ +  IR      +    
Sbjct: 62  GMGDCYQLSHVFRDGELSSKHNPEFMMAEWYRLGFDLEQMIEETVAFIRLFLGNLS---- 117

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
                        + I+  + F +Y  ID     +           +    + +    D 
Sbjct: 118 ------------YQTISYRDLFLKYTGIDYCLATNQELFAYIQAHQIPFYTSILEEGRDA 165

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA-LANIYPADPRFTKRFELYACNIEL 271
               + + IL  +IE  LG     +L  YPA ++A             +RFE+Y   +EL
Sbjct: 166 ----LLNLILGAQIESQLGQQELCVLAYYPATQAALACKRKHGAEEVAERFEIYYKGVEL 221

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVM 331
            N   EL D  EQ  RF    +++  +  ++ P+D  FL  L ++P   G+A+GFDRL+M
Sbjct: 222 ANGYHELTDAKEQEQRFLASNKQRIDLGKKSLPLDFLFLEALEKLPDCCGVAVGFDRLMM 281

Query: 332 LVTGANNINEVIW 344
           L   +  I +VI 
Sbjct: 282 LRHQSTTIADVIA 294


>gi|301168360|emb|CBW27950.1| putative lysyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 329

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 98/310 (31%), Positives = 153/310 (49%), Gaps = 8/310 (2%)

Query: 32  LREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
           +R++F+E +FI++ +  +  +PG ETHI  F       +     LYL TSPEF  K+LL+
Sbjct: 21  IRDFFLEREFIDVLTPPMVQNPGMETHIHPFQVRS-PHNKENLELYLHTSPEFHMKELLS 79

Query: 92  AGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI 151
            G  KI+  ++ +R+      H+P+F MLEWYR  E Y  +MKD  ++ +   E      
Sbjct: 80  LGFSKIYNISYCFRDEPNSTHHRPQFLMLEWYRTQEFYTTIMKDTEDLFKYCCEKMLASG 139

Query: 152 FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
              ++   N    P   TV E F     ID+   L+        L+  +  Q  +    D
Sbjct: 140 EEIKSELKNFS--PMKKTVQEIFLEVLKIDILEYLEKDKL--LALIRERFPQVPLPPEKD 195

Query: 212 DT---WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
           D    W D +  + + ++EP L      IL  +P   SAL+ I   D R   RFE+Y+  
Sbjct: 196 DHLLSWDDGYFLLFLNEVEPKLKEYPFIILYNFPHHLSALSTINKDDSRVCDRFEVYSFG 255

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDR 328
           IELCN+ +EL +    R RF ++ + K+ +Y    P   +F   +  +P SSGIA+G +R
Sbjct: 256 IELCNSFNELTELDLLRERFNEQGRLKENLYQYKLPEPSEFYKTMKSLPTSSGIALGVER 315

Query: 329 LVMLVTGANN 338
           L+M +    N
Sbjct: 316 LLMSICDIEN 325


>gi|332236935|ref|XP_003267655.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 1
           [Nomascus leucogenys]
          Length = 501

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|118575805|ref|YP_875548.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118194326|gb|ABK77244.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 425

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 113/366 (30%), Gaps = 63/366 (17%)

Query: 1   MHQIPSQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDS 46
           +H +P  P    +     R                   R+ +  SLR+   + +F EI +
Sbjct: 99  IHPLPIDPLGRLESGMDNRLNARALDMRNQKTASIFRLRHRVLESLRQGLSKRRFTEITT 158

Query: 47  M-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
              +  +     ++          ++  K  YL  SP+   K+ +  G E+++  +  +R
Sbjct: 159 PKIIGSASEGGANL-------FSLEYFGKTAYLAQSPQLY-KEQMTMGLERVYEISGFYR 210

Query: 106 NGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                   H  EFT ++   A   Y  +M     ++R A   A++               
Sbjct: 211 AENSHTGRHLSEFTSVDIEAAFMDYTDVMDVLEQLVREACVAASECTIEQ---------- 260

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
                                 D P       +       G+         D+    L  
Sbjct: 261 -----------EATGHKAEVPSDIPRITYSQAVDELGSDCGVSFGD-----DLLDSHLRL 304

Query: 225 KIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             E + G      L  +P             D   ++ F+L    +EL +    L DP  
Sbjct: 305 LGEKHPG---YYFLTDWPTKLKPFYIRPKDDDAEVSRSFDLQHGYLELSSGGSRLHDPSI 361

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
            R R E++        +     D   L      MP  SG  MG DR + ++ G +N+ E 
Sbjct: 362 LRSRLEQQ------GLDPALFADH--LRAFDWGMPPHSGWGMGLDRFMAVLVGVDNVREA 413

Query: 343 IWTPFS 348
           +  P  
Sbjct: 414 VLYPRD 419


>gi|167462236|ref|ZP_02327325.1| asparaginyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 432

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 106/349 (30%), Gaps = 42/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+R  ++ R+ I  +++EYF E  F  +D+  L  S    T      
Sbjct: 116 MDHRHLWLRA--PRQRAIMVIRSQIIRAVQEYFDERGFHLVDTPILTPSSCEGT------ 167

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T L    +  +  YL  S +    +  A    +++ F   +R  +     H  EF M+E 
Sbjct: 168 TNLFHTKYFDEDAYLTQSGQLYI-EAAAMALGRVYSFGPTFRAEKSKTRRHLIEFWMIEP 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E+ ++     +    +                      +T  +   +    D 
Sbjct: 227 EMAFVEHEESLRIQEEFVAHIIKSV--------------------LTHCQKELKVLGRDT 266

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                      R       +        D  W + F       I      N    +  YP
Sbjct: 267 SKLEACVTPFPRIAYDEAVEFLHENGFEDFKWGEDFGAPHETAIAEAY--NKPVFITHYP 324

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
               +      P  P      +L A     E+      + DP     RF++       + 
Sbjct: 325 TEIKAFYMKPDPNRPEVVLCADLIAPEGYGEIIGGSQRIDDPELMEQRFKE-----HGLS 379

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y    D            G  +G +R V  + G +++ E I  P  
Sbjct: 380 EEAYQWYMDLRR--YGTVPHCGFGLGLERTVAWICGLDHVRETIPFPRL 426


>gi|313238210|emb|CBY13303.1| unnamed protein product [Oikopleura dioica]
          Length = 603

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/352 (17%), Positives = 110/352 (31%), Gaps = 45/352 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHI 59
           N D     R               +  +    R +     F EI +   +  +     + 
Sbjct: 277 NPDTRLDNRVLDLRTTTKHAIFRIQAAVCRLFRNHLTNKGFTEIHTPKIISAASEGGAN- 335

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 +    + ++  +L  SP+   +  +AA  EK+F     +R  +     H  EF 
Sbjct: 336 ------VFTLSYFKRDAFLAQSPQLYKQMAIAADFEKVFTTGAVFRAEDSNTHRHLTEFV 389

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   A             ++R          F             E  TV E + R  
Sbjct: 390 GLDMEMAF------KYHYHEVLREI-----GDTFISIFKGLRAECRREVDTVNEQYPR-- 436

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D    L+     +        +  G+ +  +D  S    + L + ++     +   IL
Sbjct: 437 --DEFEFLEPSLVLEFPEALKMLRDNGVEIGDEDDLSTPVEKFLGKLVKEKYNTD-FYIL 493

Query: 239 DRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           D+YP           P DPR++  ++++    E+ +    + DP     R        K 
Sbjct: 494 DKYPLAVRPFYTMPDPTDPRYSNSYDMFMRGEEILSGAQRIHDPDLLIERAHHHGINLKH 553

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           I        E ++       P  +G  +G +R+ ML  G +NI      P  
Sbjct: 554 I--------EAYIEAFKYGCPPHAGGGIGMERVTMLYLGLHNIRMASLFPRD 597


>gi|313245404|emb|CBY40142.1| unnamed protein product [Oikopleura dioica]
          Length = 603

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/352 (17%), Positives = 110/352 (31%), Gaps = 45/352 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHI 59
           N D     R               +  +    R +     F EI +   +  +     + 
Sbjct: 277 NPDTRLDNRVLDLRTTTKHAIFRIQAAVCRLFRNHLTNKGFTEIHTPKIISAASEGGAN- 335

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 +    + ++  +L  SP+   +  +AA  EK+F     +R  +     H  EF 
Sbjct: 336 ------VFTLSYFKRDAFLAQSPQLYKQMAIAADFEKVFTTGAVFRAEDSNTHRHLTEFV 389

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   A             ++R          F             E  TV E + R  
Sbjct: 390 GLDMEMAF------KYHYHEVLREI-----GDTFISIFKGLRAECRREVDTVNEQYPR-- 436

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D    L+     +        +  G+ +  +D  S    + L + ++     +   IL
Sbjct: 437 --DEFEFLEPSLVLEFPEALKMLRDNGVEIGDEDDLSTPVEKFLGKLVKEKYNTD-FYIL 493

Query: 239 DRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           D+YP           P DPR++  ++++    E+ +    + DP     R        K 
Sbjct: 494 DKYPLAVRPFYTMPDPTDPRYSNSYDMFMRGEEILSGAQRIHDPDLLIERAHHHGINLKH 553

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           I        E ++       P  +G  +G +R+ ML  G +NI      P  
Sbjct: 554 I--------EAYIEAFKYGCPPHAGGGIGMERVTMLYLGLHNIRMASLFPRD 597


>gi|90077708|dbj|BAE88534.1| unnamed protein product [Macaca fascicularis]
          Length = 501

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|159041320|ref|YP_001540572.1| aspartyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157920155|gb|ABW01582.1| aspartyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 430

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/370 (17%), Positives = 115/370 (31%), Gaps = 73/370 (19%)

Query: 3   QIPSQPWWN-----RDFHYRRRPFLLKR----------NMIQSSLREYFVENQFIEIDSM 47
            +P   W N      D   R R   LKR          + +  ++R       FIE+ + 
Sbjct: 106 PLPIDIWGNVDETMLDLRLRYRTVDLKRRSNVILFKALSEVVKAMRTTLYGYGFIEVFTP 165

Query: 48  -SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
             +  S      +           +  +  YL  SP+   K+ L A  E++F    A+R 
Sbjct: 166 KIIATSTEGGAELFPVQ-------YFERTAYLAQSPQLY-KEELTASLERVFEIGPAYRA 217

Query: 107 GEQGCLHQ-PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
            +    +   EF  ++   A  +Y  +M    ++I  +   +   +         P    
Sbjct: 218 EKHDTTYHVNEFISVDAEAAFMNYRDVMSVLEDVIVESYRASVDLLSQIGREVRVPSKPF 277

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI-FSRILIE 224
           + IT  +                              + GI+V   D         +   
Sbjct: 278 KVITYDD------------------------ALSMLDKEGIKVKWGDDVPKEGLEALSRL 313

Query: 225 KIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             EP         +  +P    +        D   ++ F+L    +E+ +    + D  E
Sbjct: 314 IGEP-------FFIIHFPTMLRAFYTKPIEGDESRSESFDLVIDGMEVTSGSTRIHDKDE 366

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT----EMPQSSGIAMGFDRLVMLVTGANNI 339
                      + +  N       +F   L      MP  +G  +G  RL+M++ G  NI
Sbjct: 367 LEK------AMRARGLNPG-----NFSTHLEIYSWGMPPHAGWGLGLYRLMMVMAGVRNI 415

Query: 340 NEVIWTPFSQ 349
            EVI  P  +
Sbjct: 416 REVILFPRDR 425


>gi|322381866|ref|ZP_08055820.1| asparaginyl-tRNA synthetase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321154254|gb|EFX46576.1| asparaginyl-tRNA synthetase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 427

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 106/349 (30%), Gaps = 42/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+R  ++ R+ I  +++EYF E  F  +D+  L  S    T      
Sbjct: 111 MDHRHLWLRA--PRQRAIMVIRSQIIRAVQEYFDERGFHLVDTPILTPSSCEGT------ 162

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T L    +  +  YL  S +    +  A    +++ F   +R  +     H  EF M+E 
Sbjct: 163 TNLFHTKYFDEDAYLTQSGQLYI-EAAAMALGRVYSFGPTFRAEKSKTRRHLIEFWMIEP 221

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E+ ++     +    +                      +T  +   +    D 
Sbjct: 222 EMAFVEHEESLRIQEEFVAHIIKSV--------------------LTHCQKELKVLGRDT 261

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                      R       +        D  W + F       I      N    +  YP
Sbjct: 262 SKLEACVTPFPRIAYDEAVEFLHENGFEDFKWGEDFGAPHETAIAEAY--NKPVFITHYP 319

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
               +      P  P      +L A     E+      + DP     RF++       + 
Sbjct: 320 TEIKAFYMKPDPNRPEVVLCADLIAPEGYGEIIGGSQRIDDPELMEQRFKE-----HGLS 374

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y    D            G  +G +R V  + G +++ E I  P  
Sbjct: 375 EEAYQWYMDLRR--YGTVPHCGFGLGLERTVAWICGLDHVRETIPFPRL 421


>gi|109104378|ref|XP_001095858.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 501

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|150402788|ref|YP_001330082.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|166225359|sp|A6VHK5|SYD_METM7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150033818|gb|ABR65931.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 438

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 59/341 (17%), Positives = 118/341 (34%), Gaps = 47/341 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              + +     R+ +  S+R+ F +  F+E+++  L  S   G         TEL    +
Sbjct: 135 RRPKIQAIFKIRSEMLRSIRKTFADEGFVEVNTPKLVASATEGG--------TELFPISY 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + ++A G +K+F  A  +R  E     H  E   ++   +  + +
Sbjct: 187 FEKEAFLGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAVSIDTEMSFVNEK 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
             M                +   +       ++ P+ I + E                P+
Sbjct: 247 DAMAML-------------EKVVYNCYADIEYNRPQEIELLELNWEI-----------PE 282

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           +    L Y +A    I    +  W +  SR     +   +G      +  +P        
Sbjct: 283 KTFDKLTYTEAIDIAISKGVEIEWGEDLSRAAERAVGDEMG--GLYFITEWPTQTRPFYT 340

Query: 251 -IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
             +  D +  K F+L    +E+ +    +            E      +  +++   E +
Sbjct: 341 LPHENDNKVCKAFDLMYKELEISSGAQRVHKYD-----LLVENISNMGMNPDSF---ETY 392

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           L      MP  +G  +G DR  M++T  +NI E +  P  +
Sbjct: 393 LEAFKFGMPPHAGWGLGADRFAMVLTAQDNIRECVLFPRDR 433


>gi|225849447|ref|YP_002729612.1| lysyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643587|gb|ACN98637.1| putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(LysRS) (GX)
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 311

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 105/321 (32%), Positives = 153/321 (47%), Gaps = 13/321 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +    K++ I  S+REYF +   IE+ +  L   P  +++I      +  +   +   +L
Sbjct: 2   KEIFEKKSKIYQSIREYFYKTGSIEVFTDILLDYPNLDSNIYPIELFVFNEKKEKIKKFL 61

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            TSPE   KK+L+  +  IF     +RN E    H+ EFTMLEWYR + + E LM+D  N
Sbjct: 62  HTSPEPKMKKILSQIKSDIFQITKVFRNFEGSYKHKIEFTMLEWYRVNYNLEDLMEDTKN 121

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           I    A    +K            +  E ITV EAF +Y  I        PD  D+  + 
Sbjct: 122 IFIETAISLYKKPVITYKGKTYDLTNWEKITVDEAFYKYTKI-------YPDNIDK--MN 172

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
              +Q        D W D+F  I    +EPNLG+   TI+  YP   SA A     +   
Sbjct: 173 EFLKQNEPFFKESDNWEDLFFHIYAFYVEPNLGVEKPTIIYDYPPQLSAFA---KVENGK 229

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
            KRFE Y   IEL N  DEL DP E   R  K+++ KKK     YP+D +F+     +PQ
Sbjct: 230 GKRFETYINGIELVNGYDELNDPKELEKRLIKDLENKKKEG-FNYPLDLEFIEAAKNLPQ 288

Query: 319 SSGIAMGFDRLVMLVTGANNI 339
           S+G ++G DR +M++    ++
Sbjct: 289 SAGASLGVDRFIMVLLDLKSV 309


>gi|304406895|ref|ZP_07388549.1| asparaginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343882|gb|EFM09722.1| asparaginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 433

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/350 (18%), Positives = 119/350 (34%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++R  L+ R  I  +++++F E+ F  +D   L  S    T      
Sbjct: 118 MDRRHLWLRS--PKQRAILVIRAQIIRAVQQFFDESGFTLVDPPILTPSSCEGT------ 169

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T L    +  +  YL  S +    +  A    K++ F   +R  +     H  EF M+E 
Sbjct: 170 TNLFHTKYFDEDAYLTQSGQLYM-EAAAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEP 228

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +EQ ++     I    +                      +T  +A       D+
Sbjct: 229 EMAFVDHEQNLEVQEQFISFVVQSV--------------------LTNCKAELETIGRDI 268

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L+N   P   + Y +A +   +   D  W + F       I      +    +  YP
Sbjct: 269 SK-LENVQVPFPRITYDEAIELLHKEGFDLPWGEDFGAPHETAIAEK--FDRPVFITHYP 325

Query: 243 AP-ESALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           A  ++      P  P      ++ A     E+      + DP     RF++      ++ 
Sbjct: 326 ASFKAFYMKPDPNRPEVVLCADMIAPEGYGEIIGGSQRIDDPALMAERFQE-----HELS 380

Query: 300 NETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  +G +R V  + G  ++ E I  P +
Sbjct: 381 EEAY---AWYLDLRRYGTVPHSGFGLGLERTVAWICGLEHVRETIAFPRT 427


>gi|197102148|ref|NP_001125925.1| aspartyl-tRNA synthetase, cytoplasmic [Pongo abelii]
 gi|75070680|sp|Q5R9I5|SYDC_PONAB RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|55729693|emb|CAH91575.1| hypothetical protein [Pongo abelii]
          Length = 501

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   I+     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLIKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|296490538|gb|DAA32651.1| aspartyl-tRNA synthetase, cytoplasmic [Bos taurus]
          Length = 501

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE      F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLTNKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           QK F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AGI +  ++  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|91772787|ref|YP_565479.1| aspartyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121684432|sp|Q12XU7|SYD_METBU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91711802|gb|ABE51729.1| Aspartyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 443

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 54/346 (15%), Positives = 112/346 (32%), Gaps = 47/346 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
              R       R+ +  ++R++  ++ +IE  S   +  +    T +   +       + 
Sbjct: 134 RRERTTAIFKIRHEVLRAVRDFLSKDGYIETCSPKVVATATEGGTSLFPIT-------YF 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L++ G +K+F     +R  E     H  E T ++   +   +  
Sbjct: 187 DREAFLNQSPQLFKQILMSGGLDKVFEIGPIFRAEEHDTRRHLNEATSIDIEASFLDHFD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++    E                      I    A  +  +I+    L  P  
Sbjct: 247 VMEVLEDMVAYVYEQV--------------------IENEAASLKALDIE----LSVPKT 282

Query: 192 PDRHLLYLQAQQA-GIRVAHDDTWSDIFSRILIEKIEPNLGINC---CTILDRYPAPESA 247
           P   + Y QA             W      +    I  ++          +  +P     
Sbjct: 283 PFMKVPYSQAIDIVNAESEETVEWGGDLGTVAEHTIGEHVFKETGESHYFITDWPTEIKP 342

Query: 248 LA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                Y  +P  +K F++    +EL +    +      + R E +  +            
Sbjct: 343 FYAMPYEDNPLISKSFDMMHRTMELSSGAQRIHIHDMLKARIESQGLDSDGFD------- 395

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
             +L      MP  SG  +G +RLVM +    NI + +  P  +  
Sbjct: 396 -FYLRAFKYGMPPHSGWGIGCERLVMTMLSVENIRDTVLFPRDRKR 440


>gi|159905438|ref|YP_001549100.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|238686962|sp|A9A945|SYD_METM6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|159886931|gb|ABX01868.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 438

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 59/341 (17%), Positives = 118/341 (34%), Gaps = 47/341 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              + +     R+ +  S+R+ F +  FIE+++  L  S   G         TEL    +
Sbjct: 135 RRPKIQAIFKIRSEMLRSIRKTFADEGFIEVNTPKLVASATEGG--------TELFPISY 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + ++A G +K+F  A  +R  E     H  E   ++   +  + +
Sbjct: 187 FEKEAFLGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAVSIDTEMSFVNEK 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
             M                +   +       ++ P+ I + E                P+
Sbjct: 247 DAMAML-------------EKVVYNCYADIEYNRPQEIELLELNWEV-----------PE 282

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           +    + Y +A    I    +  W +  SR     +   +G      +  +P        
Sbjct: 283 KTFDKVTYTEAIDIAISKGVEIEWGEDLSRAAERAVGDEMG--GLYFITEWPTQTRPFYT 340

Query: 251 -IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
             +  D +  K F+L    +E+ +    +            E      +  +++   E +
Sbjct: 341 LPHEKDAKVCKAFDLMYKELEISSGAQRVHKYD-----LLVENISNMGMNPDSF---ETY 392

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           L      MP  +G  +G DR  M++T  +NI E +  P  +
Sbjct: 393 LEAFKFGMPPHAGWGLGADRFAMVLTAQDNIRECVLFPRDR 433


>gi|450763|emb|CAA40634.1| lysine--tRNA ligase [Saccharomyces cerevisiae]
          Length = 576

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 127/344 (36%), Gaps = 27/344 (7%)

Query: 24  KRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPE 83
            R  I  +LR++  +  F+E+++     S  N    + F T     DH+     L+ +PE
Sbjct: 229 VRARIIKTLRKFTDDRNFVEVETPM-TSSKSNGAMAKPFMTSSKDFDHLE----LRIAPE 283

Query: 84  FSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN----- 138
              K+ + +G +K++     +RN      H  EF+ LE+Y  + S + ++    +     
Sbjct: 284 LWTKRTMISGLQKVYEMGKVFRNEGIDSTHNAEFSTLEFYETYMSMDDMVTRTEDLFKFL 343

Query: 139 ------IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL---GTTLDNP 189
                   +       +              +   +       +   ID    G  ++ P
Sbjct: 344 ITNLQKFFQDTRTPVPKTFSELHTATSENNWKFRKVEFTPTLNKETGIDTMNSGLDINKP 403

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWS--DIFSRILIEKIEP-NLGINCCTILDRYPAPES 246
            +  + L    A++      +    S   I ++      E  +      T++   PA  S
Sbjct: 404 SETLKALPKDIAKKYFPSADNTGQLSSTQITNKTSDVFTEQRHCQSTLPTVMYHQPAMLS 463

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY--- 303
            LA   P + + TKRFE++    E  NA +E   P  Q  +F ++ Q  +   N+T    
Sbjct: 464 PLAKTDPQNKQVTKRFEVFIKGKEYINAYEEENCPQLQTQKFTQQKQINELTGNKTETLS 523

Query: 304 -PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             ID  ++  +   MP   G   G DRL M       + EV   
Sbjct: 524 PVIDYQYVETMKYGMPPVGGFGTGMDRLCMTFCDKKRMEEVTPF 567


>gi|91079194|ref|XP_968957.1| PREDICTED: similar to Aspartyl-tRNA synthetase CG3821-PA [Tribolium
           castaneum]
 gi|270003601|gb|EFA00049.1| hypothetical protein TcasGA2_TC002857 [Tribolium castaneum]
          Length = 533

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 61/355 (17%), Positives = 112/355 (31%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    RE      F EI +  +  +  +E    
Sbjct: 207 NQDTRLDNRVLDLRTPTNQAIFRLEAGVCRLFREVLTRKGFTEIHTPKIIPAA-SEGGAN 265

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K+F     +R  +     H  EFT 
Sbjct: 266 VFTVSYFKGSA-----YLAQSPQLYKQMAIAADFDKVFTIGAVFRAEDSNTHRHLTEFTG 320

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   +                                +Y T  +   +  +
Sbjct: 321 LDLEMAFNYHYHEVMLL---------------IGNSFTEIFKGLRDQYQTEIQIIGQQFS 365

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++  T LD P             +AG+ V  ++  S    ++L   ++     +   ILD
Sbjct: 366 VEPFTFLDPPLVLHFDEGRRLLGEAGVEVGPEEDLSTPAEKLLGRLVKAKYDTD-FYILD 424

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P  PR +  ++++    E+ +    + DP     R +         
Sbjct: 425 KYPLAVRPFYTMPDPETPRSSNSYDMFMRGEEILSGAQRIHDPQLLTERAKH-------- 476

Query: 299 YNETYPID----EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 477 ----HGIDLKKIASYIDAFKYGCPPHAGGGIGLERVVMLYLGLDNIRKTCMFPRD 527


>gi|148361425|gb|ABQ59294.1| putative lysyl-tRNA synthetase [Mycoplasma fermentans]
          Length = 256

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 67/269 (24%), Positives = 113/269 (42%), Gaps = 15/269 (5%)

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L          + F+T     + + +   L+ + E   KKL+  G E+++     +RN  
Sbjct: 2   LHDYLSGAA-AKPFTTH---HNSLNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNEG 57

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT +E+Y A+ + E +M     +I+   +   +  F    V  +     + +
Sbjct: 58  YDTTHNPEFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTNGVEVDLSKPFKRV 117

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            + +  ++           N  +         A+   I++    T   I + +  E +EP
Sbjct: 118 NMIDEVSKKTG-------KNFRKITLEEAIEVAKAYKIKIEKFFTIGHIINALYEELVEP 170

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T L  +P   S L+     DPRFT+R EL+    E  N   EL DPI+Q  RF
Sbjct: 171 T--LIQPTFLYGHPIEISPLSAKSD-DPRFTERAELFINTKEYANMYTELSDPIDQLERF 227

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EM 316
           E +++EK K  +E   ID DF+  L   M
Sbjct: 228 ESQLEEKNKGNDEASDIDYDFVDALEYGM 256


>gi|156555455|ref|XP_001606085.1| PREDICTED: similar to aspartyl-tRNA synthetase [Nasonia
           vitripennis]
          Length = 527

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 61/351 (17%), Positives = 121/351 (34%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+      F+EI +  +  +  +E    
Sbjct: 201 NQDTRLDNRILDLRTPANQAIFRLEAGVCKLFRDILTNKGFVEIHTPKIISAA-SEGGAN 259

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  EK+F     +R  +     H  EF  
Sbjct: 260 VFTVSYFKSSA-----YLAQSPQLYKQMAIAADFEKVFTVGAVFRAEDSNTHRHLTEFVG 314

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   + D +  +        Q+ +  +    N   +               
Sbjct: 315 LDLEMAFKYHYHEVMDTIGQMFTELFKGLQESYQTEIGIINQQYK--------------- 359

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    LD P + +        ++AG+ +  +D  S    ++L + I+     +   ILD
Sbjct: 360 VEPFKFLDPPLKLEFPQAVKLLREAGVEMGDEDDLSTPSEKLLGKIIKAKYDTD-FYILD 418

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP            A+P+ +  ++++    E+ +    + DP     R      +   I
Sbjct: 419 KYPLAVRPFYTMPDTANPKASNSYDMFMRGEEIISGAQRIHDPDFLTER-----AKHHGI 473

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+VML  G +NI +V   P  
Sbjct: 474 DIEKI---KAYIDAFRYGCPPHAGGGIGMERVVMLYLGLDNIRKVSMFPRD 521


>gi|288560271|ref|YP_003423757.1| aspartyl-tRNA synthetase AspS [Methanobrevibacter ruminantium M1]
 gi|288542981|gb|ADC46865.1| aspartyl-tRNA synthetase AspS [Methanobrevibacter ruminantium M1]
          Length = 440

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 63/336 (18%), Positives = 112/336 (33%), Gaps = 46/336 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDHIRKPLYL 78
               +  +  ++R+YF E   IEI++  L  S   G         TEL    +  K  +L
Sbjct: 143 IFKIKANMFKAVRQYFDEQGMIEINTPKLVASATEGG--------TELFPITYFEKEAFL 194

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   + ++ AG +K+F     +R  E     H  E   ++   +      +M    
Sbjct: 195 GQSPQLYKQMMMGAGFDKVFEIGQIFRAEEHDTLRHLNEAVSIDCEISFADDVDVMNVLD 254

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            +I    +                       +  E  A+            P+ P   + 
Sbjct: 255 GMITRVLQ-----------------------STKENCAKELETLEYDLSAIPEGPFPEVK 291

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
           Y  A         D  W +  SR   + +           L  +P+         Y   P
Sbjct: 292 YDDAVDIINSKGIDMEWGEDLSREAEKALGDTQ--EGFYFLTDWPSAIKPFYAMPYEDRP 349

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
             +  F+L   N+E+ +    +     Q     K+M E+  +  + +     +L      
Sbjct: 350 EISHAFDLMYKNLEISSGSIRVH----QYDLLVKQMIERD-LNPDGFG---SYLKAFEYG 401

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           M   +G  +G DRL M++TG  NI E +  P  +  
Sbjct: 402 MAPHAGWGVGADRLAMVLTGVENIRETVLFPRDRHR 437


>gi|268325209|emb|CBH38797.1| aspartyl-tRNA synthetase [uncultured archaeon]
          Length = 437

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 59/340 (17%), Positives = 118/340 (34%), Gaps = 49/340 (14%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
              R +   + R++   ++R++F E   IEI++   +  +    T +   S       + 
Sbjct: 138 RTERTKHIFMIRSLTLRAIRDFFDERGLIEINTPKIVSAATEGGTALFPIS-------YF 190

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   + L+A+G ++++  A  +R  E     H  E T ++   A  S ++
Sbjct: 191 EREAFLNQSPQLYKQILMASGFDRVYEIAPIFRAEEHDTTKHLNEATSVDVELAFVSDKE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI-DLGTTLDNPD 190
           +M     +I                                    Y  +  L  TL+ P 
Sbjct: 251 VMALLEELIAFVYSRV---------------------------VDYPGLAKLKVTLEVPA 283

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
            P R + Y +A +          W +         +   +G      +  +P        
Sbjct: 284 IPFRRITYAEAIELLSGEGEQIGWGEDIGTSAERTLGKIIGE--LYFITDWPCAIKPFYA 341

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             PA       F+L    +EL +    +          +++++ K           E +L
Sbjct: 342 Q-PAAEGICNAFDLMHPRLELSSGSQRVHSY----ELLKRQIETK---GLSADSF-EFYL 392

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                 MP  +G  +G +RL+M +   +NI EV+  P  +
Sbjct: 393 DAFRYGMPPHAGWGLGVERLLMSMLEIDNIREVVLFPRDR 432


>gi|240849241|ref|NP_001155359.1| aspartyl-tRNA synthetase, cytoplasmic [Ovis aries]
 gi|238799810|gb|ACR55777.1| aspartyl-tRNA synthetase [Ovis aries]
          Length = 501

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE      F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLTNKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           QK F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQMVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AGI +  ++  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|315426572|dbj|BAJ48202.1| aspartyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 440

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 114/339 (33%), Gaps = 44/339 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
                R   L  + +  ++R++F    F+E+ +  L  S   E     F  +     +  
Sbjct: 138 RRPEVRAVFLVGSEVLKAMRDFFHMKGFVEVRTPKLIGSA-TEGGAELFEVK-----YFD 191

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTMLEWYRAHESYEQL 132
           +  YL  SP+   K+ L    EK+      +R        H  EFT ++  ++     ++
Sbjct: 192 RVAYLAQSPQLY-KEQLTTVFEKVCEIGPYFRAEASHTGRHISEFTSVDIEQSFADMYEV 250

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     ++    +                      +   +   +   ++L     +  + 
Sbjct: 251 MDVLEELVVHVHKHL--------------------VENHQHLLQMLGVNLRVPKRHFKRF 290

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP-ESALANI 251
                    +  G+ +   + +     R+L +K            +  +P   +      
Sbjct: 291 TYDEALEILRSEGVEMRWGEDFGTPHLRLLGKK------YPTYYFITHFPTESKPFYIQE 344

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              DPR ++ F+L    +EL +    + D            + ++K  N      ED L 
Sbjct: 345 TEKDPRISESFDLMYQWLELASGGTRVSDHDVLER------KLREKGLNPAMF--EDHLK 396

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                MP  +G  +GF+R +M++T   NI E +  P  +
Sbjct: 397 VFSYGMPVHAGWGLGFERFLMVLTRRTNIRETVLFPRDR 435


>gi|50409277|ref|XP_456856.1| DEHA2A12100p [Debaryomyces hansenii CBS767]
 gi|49652520|emb|CAG84831.1| DEHA2A12100p [Debaryomyces hansenii]
          Length = 562

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 115/350 (32%), Gaps = 41/350 (11%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRA 61
           D     R               +  +    RE+     F EI +  +  +P    ++   
Sbjct: 234 DTRLDARVIDLRTPTNQAIFKIQAAVCQLFREFLSTKGFTEIHTPKIIAAPSEGGSN--- 290

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               +    + +   YL  SP+   ++L+AA  EK++  A  +R        H  EFT L
Sbjct: 291 ----VFEISYFKGKAYLAQSPQLYKQQLIAADFEKVYEVAPVFRAENSNTHRHMTEFTGL 346

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   A E +   + D ++ +        +  +S +          E   + E        
Sbjct: 347 DLEMAFEEHYDEVIDVLSDLFVFIFTELKNRYSKEIATVRKQYPVEEFKLPEDGKMV--- 403

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                     +          ++AG  V   +  S    ++L + +      +   ILD+
Sbjct: 404 ----------RLHFKEGIAMLREAGKEVDDFEDLSTENEKLLGKLVREKYNTD-FYILDK 452

Query: 241 YPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           +P             DPR++  ++ +    E+ +    + DP+  + R         +I 
Sbjct: 453 FPLAIRPFYTMPDSEDPRYSNSYDFFMRGEEILSGAQRIHDPVLLKERMNA-----HEID 507

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +D D++       P  +G  +G +R+VM      NI      P  
Sbjct: 508 PSVPGLD-DYVDAFTYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPRD 556


>gi|58265840|ref|XP_570076.1| aspartate-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134110272|ref|XP_776192.1| hypothetical protein CNBD0130 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258862|gb|EAL21545.1| hypothetical protein CNBD0130 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226309|gb|AAW42769.1| aspartate-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 567

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 61/333 (18%), Positives = 107/333 (32%), Gaps = 27/333 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ I    REY     FIEI S  LQ +   E+    F  +     +  +  +L
Sbjct: 253 QAIFRIQSAICQLFREYLNSEGFIEIHSPKLQGAA-TESGASVFKVK-----YFDREAFL 306

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+ + +  +A   E+++  A  +R  +     H  EF  L+   A E +     D +
Sbjct: 307 AQSPQLAKQMAIAGDMERVYEIAPVFRAEDSNTHRHMTEFMGLDLEMAIEEHYHEAVDVL 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +        Q  F  +          E     E   R    +    L      D    
Sbjct: 367 DNMLLHIFRGLQTKFKHEIETVKKQFPCEDFLFLEKTLRLPFKEGMRMLREAGATDGE-- 424

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
                  G  +   D  S    ++L   +      +   ILD++P           P+DP
Sbjct: 425 -------GKPIGELDDMSTENEKLLGRLVREKYNTD-YFILDKFPIAIRPFYTMPDPSDP 476

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
             +  ++ +    E+ +    + DP     R       K    +        +L      
Sbjct: 477 TLSNSYDFFMRGEEILSGAQRIHDPTFLVER------MKDVGIDPASM--AGYLDAFKLG 528

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P  +G  +G +R+VML     NI      P  
Sbjct: 529 APPHAGGGIGLERVVMLFLKLGNIRRASLFPRD 561


>gi|126134255|ref|XP_001383652.1| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|126095801|gb|ABN65623.1| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 573

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 115/356 (32%), Gaps = 53/356 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRA 61
           D     R               ++ + +  RE+     F EI +   +  +    ++   
Sbjct: 245 DTRLDARVIDLRTPTNQAIFKIQSGVCALFREFLAGRGFTEIHTPKIIAAASEGGSN--- 301

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               +   ++ +   +L  SP+   ++L+AA  EK++  A  +R        H  EF  L
Sbjct: 302 ----VFQINYFKGSAFLAQSPQLYKQQLIAADFEKVYEVAPVFRAENSNTHRHMTEFMGL 357

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   A E +   + D +  +        +K ++ +          E   V E+       
Sbjct: 358 DLEMAFEEHYHEVLDILADLFVFIFTELKKRYAKEIATVRKQFPVEEFKVPESGKMV--- 414

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                     +          ++AG  V   +  S    ++L + +      +   ILD+
Sbjct: 415 ----------RLHFKEGIAMLREAGKEVDDFEDLSTENEKLLGKLVRDKYDTD-FYILDK 463

Query: 241 YPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           +P           P DPR++  ++ +    E+ +    + DP     R            
Sbjct: 464 FPLAVRPFYTMPDPEDPRYSNSYDFFMRGEEILSGAQRIHDPALLTERLT---------- 513

Query: 300 NETYPID------EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              + +D       ++L       P  +G  +G +R+VM      NI      P  
Sbjct: 514 --AHEVDPNVAGVHEYLEAFTYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRD 567


>gi|59803475|gb|AAX07827.1| cell proliferation-inducing protein 40 [Homo sapiens]
          Length = 501

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+F     +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVMEEIADTMVHIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|329765180|ref|ZP_08256761.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138339|gb|EGG42594.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 436

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 73/343 (21%), Positives = 124/343 (36%), Gaps = 58/343 (16%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQD 70
            RR+        R+ +  S+R+YF E +F EI++  +  +   G           L    
Sbjct: 136 LRRKTLQHIFNVRSEVLKSIRDYFYEEEFTEINTPKMIATATEGGAA--------LFAIF 187

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +  K  +L  SP+   K+ L    EK+F     +R        H  E   ++   A   Y
Sbjct: 188 YYNKEAFLAQSPQLY-KEQLTMSFEKVFEIGPIFRAEPSRTNRHLAEAISIDLEEAFVDY 246

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             +M    NII+ +    N    +  +        P+ I       RY+  D        
Sbjct: 247 NDVMNRIENIIKISLNSVNDYAKNNPDAEFIIPQIPKSIP------RYSYDD-------- 292

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESAL 248
                  L  + Q+AG +      W D      ++KI    G+     +  +P  P+   
Sbjct: 293 -------LVEKMQKAGAKTE----WGDDLYPSNLKKI----GVEGFYFIKDWPLGPKPFY 337

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID-- 306
                A+P+ ++ F+L   ++EL +    +    E   R       K K        D  
Sbjct: 338 VKDSKANPKISESFDLMFGDLELSSGSTRIEKRHELEER------MKNKG----MKTDAF 387

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E  L      +P  +G  +G +RL+M +TG  NI +V + P  
Sbjct: 388 EYHLGAFDYGVPPHAGCGIGLERLIMALTGTENIRDVTFYPRD 430


>gi|119632023|gb|EAX11618.1| aspartyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
 gi|119632024|gb|EAX11619.1| aspartyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
          Length = 468

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 142 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 200

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+F     +R  +     H  EF  
Sbjct: 201 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVG 255

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 256 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 312

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 313 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 359

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 360 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 414

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 415 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 462


>gi|73984263|ref|XP_848666.1| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA
           ligase) (AspRS) isoform 2 [Canis familiaris]
          Length = 501

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           QK F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AGI +  ++  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|78394948|gb|AAI07750.1| Aspartyl-tRNA synthetase [Homo sapiens]
          Length = 501

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+F     +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|30584115|gb|AAP36306.1| Homo sapiens aspartyl-tRNA synthetase [synthetic construct]
 gi|61372030|gb|AAX43774.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|61372037|gb|AAX43775.1| aspartyl-tRNA synthetase [synthetic construct]
          Length = 502

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+F     +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|253577515|ref|ZP_04854828.1| asparaginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843055|gb|EES71090.1| asparaginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 431

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 64/350 (18%), Positives = 116/350 (33%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++R  ++ R  I  +++E+F +N F  +D   L  +    T      
Sbjct: 116 MDHRHLWLRSS--KQRAIMVIRAEIIRAVQEFFDQNGFTLVDPPILTPTSAEGT------ 167

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T L    +  +  YL  S +    +  A    K++ F   +R  +     H  EF M+E 
Sbjct: 168 TNLFHTKYFDEDAYLTQSGQLYM-EAAAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEP 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E+ +K   N I    +   +   +                           D+
Sbjct: 227 EMAFTDHEESLKIQENFITHVVQSVLKNCRAE--------------------LEAVGRDV 266

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L+    P   + Y +A +       D  W + F       I      +    +  YP
Sbjct: 267 SK-LEAIQAPFPRITYDEAIEYLHSQGFDIPWGEDFGAPHETAIAERY--DKPVFITHYP 323

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           A   +      P  P      ++ A     E+      + DP+    RF++       + 
Sbjct: 324 AGIKAFYMKPDPNRPEVVLCADMIAPEGYGEIIGGSQRIDDPVLMEERFKEHN-----LS 378

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ETY     +L          SG  +G +R V  + G +++ E I  P  
Sbjct: 379 PETYQ---WYLDLRKYGSVPHSGFGLGLERTVAWICGLDHVRETIPFPRM 425


>gi|148707802|gb|EDL39749.1| aspartyl-tRNA synthetase [Mus musculus]
          Length = 574

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 248 NQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 306

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 307 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 361

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    +     E     E   R   
Sbjct: 362 LDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR--- 418

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   +LD
Sbjct: 419 ------------LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTD-FYVLD 465

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 466 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 520

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 521 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 568


>gi|45439306|ref|NP_001340.2| aspartyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|20178330|sp|P14868|SYDC_HUMAN RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; AltName:
           Full=Cell proliferation-inducing gene 40 protein
 gi|12653689|gb|AAH00629.1| Aspartyl-tRNA synthetase [Homo sapiens]
 gi|30582259|gb|AAP35356.1| aspartyl-tRNA synthetase [Homo sapiens]
 gi|60655171|gb|AAX32149.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|60655173|gb|AAX32150.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|119632022|gb|EAX11617.1| aspartyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119632025|gb|EAX11620.1| aspartyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|123979676|gb|ABM81667.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|123994473|gb|ABM84838.1| aspartyl-tRNA synthetase [synthetic construct]
 gi|158254646|dbj|BAF83296.1| unnamed protein product [Homo sapiens]
          Length = 501

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+F     +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|310779798|ref|YP_003968130.1| asparaginyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309749121|gb|ADO83782.1| asparaginyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 463

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F EN F+ + +  +  +       +   +T  +
Sbjct: 122 AHLRPRTNTFSAVFRVRSVLAYAIHKFFQENDFVYVHTPIITGADCEGAGEMFRVTTLDL 181

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   K   L  S + + +   AA    ++ F   +R        H
Sbjct: 182 DNVPKTEEGSIDEAKDFFGKETNLTVSGQLNVETYCAA-FRNVYTFGPTFRAENSNTSRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M+    +++   +    +           F+      + E 
Sbjct: 241 ASEFWMIEPEVAFGDLGVNMELAEAMVKYVIKYVMDECPE----EMEFFNSFIEKGLFEK 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  +  G +      W           +       
Sbjct: 297 LNNVLNNDFGRVTYTE-------AIEILENCGKKFDFPVEWGIDLQSEHERYLAEEHFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +  +  +L A  I E+        D      R E+  
Sbjct: 350 P-IFVTDYPKDIKAFYMKMNEDDKTVRAMDLLAPGIGEIIGGSQREDDLPLLEKRMEEMN 408

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  F   L        SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 409 LNKE---------DYTFYTDLRRYGSFPHSGFGLGFERMMMYITGMTNIRDVIPFPRT 457


>gi|296204891|ref|XP_002749522.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 2
           [Callithrix jacchus]
          Length = 401

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 75  NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 133

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 134 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 188

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 189 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 245

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 246 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 292

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 293 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 347

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 348 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 395


>gi|154149654|ref|YP_001403272.1| aspartyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|153998206|gb|ABS54629.1| aspartyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 430

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 60/340 (17%), Positives = 115/340 (33%), Gaps = 45/340 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              R       R+    ++ E+  +  FI I +  +  +   G         TEL    +
Sbjct: 125 RRPRVAAVFQIRSAALFAVNEFLHKEGFISITTPKIVAAATEGG--------TELFPIAY 176

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + ++A G EK++     +R  E     H  E T ++   +   + 
Sbjct: 177 FDKEAFLNQSPQLYKQMMMAGGFEKVYEIGPIFRAEEHNTTKHLNEATSIDIEVSFADHH 236

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +MK   ++I    E  N+   +                     A +  +  G  +    
Sbjct: 237 DVMKTLEHLIVTTYEYVNKTCSTQIANLEIDNFAVPK-------APFTRLPYGEAIGIAQ 289

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA- 249
           +               +      + D  S      I   +G      +  +P        
Sbjct: 290 K---------------KSGEPIKYGDDISAAAEHAIGDEMG--AHYFIVDWPTEIRPYYA 332

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
             Y  DP   K F+L    +EL +    +     Q     ++++ KK +  E++   E +
Sbjct: 333 MPYEDDPSICKAFDLMHPRMELSSGAQRVH----QYDLLVQQIK-KKGLNPESF---EFY 384

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           L      MP  +G  +G +RL+M + G +N+ E +  P  
Sbjct: 385 LRPFRYGMPPHAGWGLGAERLIMTMLGLSNVREAVLFPRD 424


>gi|149730553|ref|XP_001490073.1| PREDICTED: similar to Aspartyl-tRNA synthetase, cytoplasmic
           (Aspartate--tRNA ligase) (AspRS) (Cell
           proliferation-inducing gene 40 protein) [Equus caballus]
          Length = 501

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFSYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AGI +  ++  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|332236937|ref|XP_003267656.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 2
           [Nomascus leucogenys]
          Length = 401

 Score =  169 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 75  NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 133

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 134 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 188

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 189 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 245

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 246 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 292

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 293 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 347

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 348 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 395


>gi|73984269|ref|XP_856839.1| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA
           ligase) (AspRS) isoform 4 [Canis familiaris]
          Length = 470

 Score =  169 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 144 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 202

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 203 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 257

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           QK F  +    N     E     E   R   
Sbjct: 258 LDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLR--- 314

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AGI +  ++  S    ++L   ++     +   ILD
Sbjct: 315 ------------LEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 361

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 362 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 416

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 417 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 464


>gi|26346400|dbj|BAC36851.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  168 bits (426), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    +     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFKTEIQTVSKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   +LD
Sbjct: 346 ------------LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTD-FYVLD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|213512448|ref|NP_001134011.1| Aspartyl-tRNA synthetase, cytoplasmic [Salmo salar]
 gi|209156148|gb|ACI34306.1| Aspartyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 531

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 113/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ +    R+      F+EI +  +  +  +E    
Sbjct: 205 NQDTRLDNRVIDLRTTTSQAIFRLQSGVCQLFRDTLTNKGFVEIQTPKIISAA-SEGGAN 263

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  + A  +K+FC    +R  +     H  EF  
Sbjct: 264 VFTVSYFKTSA-----YLAQSPQLYKQMCICADFDKVFCVGPVFRAEDSNTHRHLTEFVG 318

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   +                +  +   V        ++ T  +   +   
Sbjct: 319 LDIELAFNYHYHEVI---------------ESITDTMVQIFKGLRDKFQTEIQTVGKQYP 363

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            +    L+   + +        ++AG+ +  ++  S    ++L   ++     +   +LD
Sbjct: 364 SEPFKFLEPTLRLEYSEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYVLD 422

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P D +++  ++++    E+ +    + D      R          I
Sbjct: 423 KYPLAVRPFYTMPDPNDKKYSNSYDMFMRGEEILSGAQRIHDAQLLTER-----AMHHNI 477

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P   G  +G +R+ ML  G +N+ +    P  
Sbjct: 478 DLEKI---KSYIDSFRYGAPPHGGGGIGLERVCMLYLGLHNVRQTSMFPRD 525


>gi|73984267|ref|XP_533339.2| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA
           ligase) (AspRS) isoform 1 [Canis familiaris]
          Length = 481

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/334 (17%), Positives = 112/334 (33%), Gaps = 33/334 (9%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I    RE  +   F+EI +  +  +  +E     F+      +      Y
Sbjct: 172 SQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGANVFTVSYFKNNA-----Y 225

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  + A  EK+FC    +R  +     H  EF  L+   A   +   + + 
Sbjct: 226 LAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVEE 285

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           +           QK F  +    N     E     E   R                +   
Sbjct: 286 IADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLR---------------LEYCE 330

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                ++AGI +  ++  S    ++L   ++     +   ILD+YP           P +
Sbjct: 331 ALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILDKYPLAVRPFYTMPDPRN 389

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
           P+ +  ++++    E+ +    + DP     R          I  E     + ++     
Sbjct: 390 PKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGIDLEKI---KAYIDSFRF 441

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 442 GAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 475


>gi|62896511|dbj|BAD96196.1| aspartyl-tRNA synthetase variant [Homo sapiens]
          Length = 501

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+F     +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|303244759|ref|ZP_07331089.1| aspartyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302484893|gb|EFL47827.1| aspartyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 438

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 122/366 (33%), Gaps = 61/366 (16%)

Query: 3   QIPSQP----WWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
            +P  P      + D    RR               R+ +  S+R+ F  N FIE+++  
Sbjct: 110 PLPLDPSEKVPADIDTRLDRRFLDLRRPKIQALFRLRSEMLKSVRDTFYNNGFIEVNTPK 169

Query: 49  LQYSP--GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
           L  S   G         TEL    +  +  +L  SP+   + ++AAG +++F     +R 
Sbjct: 170 LVASATEGG--------TELFPISYFDREAFLGQSPQLYKQMMMAAGFDRVFEIGPIFRA 221

Query: 107 GEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
            E     H  E   ++   +    +  M    N++        +                
Sbjct: 222 EEHNTRRHLNEAISIDCEMSFSDEKDAMNVLENVVHNVFVDLYENN-------------- 267

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
                         +D+   L+  + P   + Y +A         D  W + FSR   + 
Sbjct: 268 --------QKELRTLDIN--LNVQETPFPRVTYTEAVDIVNSKGIDMEWGEDFSRAAEKI 317

Query: 226 IEPNLGINCCTILDRYPAPESALAN-IYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           +  ++       +  +P             +P+  K F+L   ++E+ +           
Sbjct: 318 LGDSM--EGFYFITEWPTETRPFYTLPNQENPKICKAFDLMYKDLEISSGAQRNHKYD-- 373

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E  ++  +  E +     +L      MP  +G  MG +R +M++T   NI E +
Sbjct: 374 ---LLVEGIKRMGLNPEGFGT---YLEAFKYGMPPHAGWGMGAERFMMIITCQENIRECV 427

Query: 344 WTPFSQ 349
             P  +
Sbjct: 428 LFPRDR 433


>gi|88603688|ref|YP_503866.1| aspartyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|97196725|sp|Q2FRU5|SYD_METHJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|88189150|gb|ABD42147.1| aspartyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 430

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/343 (19%), Positives = 118/343 (34%), Gaps = 45/343 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              R       RN +Q + R +F EN FIEI++  +  +   G         TEL    +
Sbjct: 125 RRPRVSAIFKIRNAVQHATRNFFFENGFIEINTSKIVAAATEGG--------TELFPIAY 176

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + ++AAG EK++     +R  E     H  E T ++   +   + 
Sbjct: 177 FEKEAFLNQSPQLYKQMMMAAGFEKVYEIGPIFRAEEHNTTKHLNEATSIDIEVSFTDHL 236

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+   ++IR                      +    T ++A A     D         
Sbjct: 237 GVMQTLEDLIRDI-------------------YQFVDKTCSDAIADLGLDDFAVPEKGFP 277

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA- 249
           +         A         D  + D         I   +G      +  +P+       
Sbjct: 278 RLPYSEAIEIASA---TCEEDIAYGDDIGTAAERAIGEEMG--RLYFIVDWPSSIRPYYA 332

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
             Y  DP   K F++    +EL +    +     Q     +++  KK +  E +   E +
Sbjct: 333 MPYENDPEICKAFDMMHPRMELSSGAQRVH----QHDLLVEQI-AKKGLNPENF---EFY 384

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           L      MP  +G  +G +RLV  + G  N+ E +  P  +  
Sbjct: 385 LNPFRFGMPPHAGWGLGAERLVTTMLGLPNVREAVLFPRDRHR 427


>gi|209155108|gb|ACI33786.1| Aspartyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 531

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ +    R+      F+EI +  +  +  +E    
Sbjct: 205 NQDTRLDNRVIDLRTTTSHAIFRLQSGVCQLFRDTLTNKGFVEIQTPKIISAA-SEGGAN 263

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  + A  +K+FC    +R  +     H  EF  
Sbjct: 264 VFTVSYFKTSA-----YLAQSPQLYKQMCICADFDKVFCVGPVFRAEDSNTHRHLTEFVG 318

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   +                +  +   V        ++ T  +   +  +
Sbjct: 319 LDIELAFNYHYHEVI---------------ESITDTMVQIFKGLRDKFQTEIQTVGKQYS 363

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            +    L+   + +        ++AG+ +  ++  S    ++L   ++     +   +LD
Sbjct: 364 SEPFKFLEPTLRLEYTEGVAMLREAGVDMGDEEDLSTPNEKLLGRLVKEKYDTD-FYVLD 422

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P D +++  ++++    E+ +    + D      R          I
Sbjct: 423 KYPLAVRPFYTMPDPNDKKYSNSYDMFMRGEEILSGAQRIHDAQLLTER-----AIHHNI 477

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P   G  +G +R+ ML  G +N+ +V   P  
Sbjct: 478 DLEKI---KSYIDSFRYGAPPHGGGGIGLERVCMLYLGLHNVRQVSMFPRD 525


>gi|114581050|ref|XP_001155013.1| PREDICTED: aspartyl-tRNA synthetase isoform 2 [Pan troglodytes]
 gi|114581052|ref|XP_001155062.1| PREDICTED: aspartyl-tRNA synthetase isoform 3 [Pan troglodytes]
          Length = 468

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 142 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 200

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+F     +R  +     H  EF  
Sbjct: 201 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVG 255

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 256 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 312

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 313 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 359

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 360 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 414

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 415 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 462


>gi|211065507|ref|NP_803228.2| aspartyl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus]
 gi|74142156|dbj|BAE31847.1| unnamed protein product [Mus musculus]
 gi|74142233|dbj|BAE31881.1| unnamed protein product [Mus musculus]
 gi|74146640|dbj|BAE41327.1| unnamed protein product [Mus musculus]
 gi|74181559|dbj|BAE30045.1| unnamed protein product [Mus musculus]
 gi|74207176|dbj|BAE30780.1| unnamed protein product [Mus musculus]
 gi|74214523|dbj|BAE31110.1| unnamed protein product [Mus musculus]
 gi|74220274|dbj|BAE31315.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    +     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   +LD
Sbjct: 346 ------------LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTD-FYVLD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|154499973|ref|ZP_02038011.1| hypothetical protein BACCAP_03630 [Bacteroides capillosus ATCC
           29799]
 gi|150271571|gb|EDM98828.1| hypothetical protein BACCAP_03630 [Bacteroides capillosus ATCC
           29799]
          Length = 440

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/346 (15%), Positives = 110/346 (31%), Gaps = 44/346 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
              R R     +  I  + REY     F EI +   +       ++I          D+ 
Sbjct: 132 RSLRERSVFRIQAGICRAFREYLQSQDFTEIHTPKIVHAGAEGGSNI-------FRLDYF 184

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+F  K+ +    E++F     +R  +     H  E+T +++   +     
Sbjct: 185 GRKAFLTQSPQFY-KQTMVPVFERVFEVGPVFRAEKHSTTRHLNEYTSMDFEMGYIDSFY 243

Query: 132 LMK-DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +       +R    +  ++             E + I                      
Sbjct: 244 DIIAMETGFLRYCFRLLGEEYAGDLARLDITLPEMKDIPCVRFD---------------- 287

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                   L A++ G  + +           +    +   G +    +  YPA +     
Sbjct: 288 ----EAKRLAAEKYGYAIRNPYDLEPEEEHAIGRYAKEVWGSDLV-FVTHYPAKKRPFYA 342

Query: 251 IYPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
           +    DP++T  F+L    +E+      + D  +Q  + E      +   +      E +
Sbjct: 343 MDDPEDPKYTLSFDLLFRGMEVTTGGQRIHDYYQQVAKME------RLGMDPAEF--ESY 394

Query: 310 LACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L  L     P   G+ +G +RL M + G +N+      P  ++  E
Sbjct: 395 L-MLHKYGAPPHGGLGIGLERLTMQLCGLDNVRLATLFPRDRTRLE 439


>gi|21264011|sp|Q922B2|SYDC_MOUSE RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|14250408|gb|AAH08638.1| Aspartyl-tRNA synthetase [Mus musculus]
          Length = 501

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    +     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   +LD
Sbjct: 346 ------------LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTD-FYVLD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|114581048|ref|XP_001154956.1| PREDICTED: aspartyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 470

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 144 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 202

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+F     +R  +     H  EF  
Sbjct: 203 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVG 257

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 258 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 314

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 315 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 361

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 362 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 416

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 417 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 464


>gi|114581044|ref|XP_515810.2| PREDICTED: aspartyl-tRNA synthetase isoform 5 [Pan troglodytes]
 gi|114581046|ref|XP_001155169.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic isoform 4 [Pan
           troglodytes]
          Length = 501

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+F     +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|45655826|ref|YP_003635.1| lysyl-tRNA synthetase-like protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45602797|gb|AAS72272.1| lysyl-tRNA synthetase homolog [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 338

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 98/330 (29%), Positives = 160/330 (48%), Gaps = 25/330 (7%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +  L++R    S LR++F +  ++E+D+  L+  P  E ++  F      +   ++  Y
Sbjct: 19  SQEVLIQRAKFLSVLRKFFEKRNYLEMDTPCLKPVPSMEPYLDPFLVRSPSK---KEKGY 75

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L TSPE+S K++L+ G EKI+   H +R+  E    H  EF MLE+Y    + E LM  C
Sbjct: 76  LITSPEYSLKEILSKGLEKIYEITHTFRSGEEGSPFHSAEFLMLEFYTVGITLEGLMDFC 135

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
            +++    +      F+ + V        + ++V E+  RYA   +  +  +    +  L
Sbjct: 136 TDLLEVLDQEFYSYGFNREQV--------QRMSVEESLKRYAFCGISKSELDRVITEHTL 187

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
             + A++            D F  + +  +E +L     T L  YP   +AL+ I     
Sbjct: 188 SEIPAEKRAYE--------DSFFIVFLNLVEKHLP-KGFTFLYDYPPELAALSKIRS--- 235

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
            F KRFELY  N+EL NA +EL DPIEQ  RF  E + +K +  E Y ID      L   
Sbjct: 236 GFAKRFELYFGNLELGNAFEELTDPIEQISRFRSERELRKNLGKEVYAIDSGLERALKEG 295

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +P S GI++G DRL++ + G +++ EV   
Sbjct: 296 IPDSCGISIGLDRLLLCILGGSSLREVSPY 325


>gi|74226918|dbj|BAE27102.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    +     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   +LD
Sbjct: 346 ------------LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTD-FYVLD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|70927070|ref|XP_735975.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56510118|emb|CAH87400.1| hypothetical protein PC302445.00.0 [Plasmodium chabaudi chabaudi]
          Length = 267

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 103/274 (37%), Gaps = 27/274 (9%)

Query: 4   IPSQP-WWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY 51
           +P +    + +  YR+R              + R  I + LR +  +  FIE+++ S+  
Sbjct: 1   LPMKYGLKDTEIRYRQRYLDLIVNESTRNIFITRTKIINFLRSFLNDQGFIEVETPSMNL 60

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
             G  +  R F T     + +   LYL+ + E   K L+  G ++++     +RN     
Sbjct: 61  VAGGAS-ARPFITH---HNDLDIDLYLRIATELPLKMLIVGGLDRVYEIGKVFRNEGIDN 116

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF--------SFQNVNCNPFS 163
            H PEFT  E+Y A+  Y  L+K                              +  +   
Sbjct: 117 THNPEFTSCEFYWAYADYYDLIKWSEEFFSKLVYHLFGTYKILYNKDGPEKDPIEIDFTP 176

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               I++ E   +   + L    D+P+  ++  +    ++  I + +  T + +  ++  
Sbjct: 177 PYPKISLVEELEKITKVKLEQPFDSPETINK--MINIIKENNIEMPNPPTAAKLLDQLAS 234

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
             IE N+  N    +  +P   S LA  + + P 
Sbjct: 235 HFIE-NIYQNQPFFIIEHPQIMSPLAKYHRSKPG 267


>gi|148361419|gb|ABQ59291.1| putative lysyl-tRNA synthetase [Mycoplasma caviae]
          Length = 256

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 15/269 (5%)

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L          + F+T     + + +   L+ + E   KKL+  G E+++     +RN  
Sbjct: 2   LHDYLSGAA-AKPFTTH---HNSLNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNEG 57

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H PEFT +E+Y A+ + E +M     +I+   +   +  F    V  +     + +
Sbjct: 58  YDTTHNPEFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFITNGVEVDLSKPFKRV 117

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            + +A ++    D                   A+   I++    T   I + +  E +EP
Sbjct: 118 NMIDAVSKETGKDFRKIT-------LEEAIEVAKVHKIKLEKFYTIGHIINALYEELVEP 170

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +  +   T L  +P   S L+     DPRFT+R EL+    E  N   EL DPI+Q  RF
Sbjct: 171 S--LIQPTFLYGHPIEISPLSAKSE-DPRFTERAELFINTKEYANMYTELSDPIDQLERF 227

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EM 316
           E +++EK K  +E   ID DF+  L   M
Sbjct: 228 EAQLEEKSKGNDEASDIDYDFVDALEYGM 256


>gi|154281359|ref|XP_001541492.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150411671|gb|EDN07059.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 569

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/338 (17%), Positives = 105/338 (31%), Gaps = 62/338 (18%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ +   +R +F++  F+E+++  L    G                         
Sbjct: 282 DILRARSSVIQYIRSFFLDRSFMEVETPILASVAGG------------------------ 317

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
                                            H PEFT  E+Y A    E L+    + 
Sbjct: 318 -----------------------------LDKTHNPEFTTCEFYHAFADLETLITLTESF 348

Query: 140 IRC---AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
                      N+ + +      +  +    +             L      P +     
Sbjct: 349 FTGLDRHIHHLNETLETLSPTTTSFATPFRRLDFIPDLETAMCHKLPDFTTTPTEEATKT 408

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYP- 253
           +    +Q    +  +     +  R+    +EP       T +  +P   S    +  +P 
Sbjct: 409 VIQLFEQLSHPLPTNPNLPRLLDRLSAIYLEPQCKD--PTFIVNHPECLSPLSKSFTHPA 466

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                  R EL+    E+ N  +E   P EQR +FE ++  +         +DE++L  L
Sbjct: 467 CGQTVAARAELFIDQREVVNMYEEENSPFEQRRKFEIQLGFQVPAVEAEGKMDENYLQAL 526

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              +P + G   G DRL ML TGA  I +V+     +S
Sbjct: 527 QWGLPPTGGWGCGVDRLCMLFTGARRIGDVLSFGNLRS 564


>gi|321262629|ref|XP_003196033.1| aspartate-tRNA ligase [Cryptococcus gattii WM276]
 gi|317462508|gb|ADV24246.1| aspartate-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 566

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/333 (17%), Positives = 106/333 (31%), Gaps = 27/333 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ +    RE+     FIEI S  LQ +   E+    F  +     +  +  +L
Sbjct: 252 QAIFRIQSAVCQLFREHLNSEGFIEIHSPKLQGAA-TESGASVFKVK-----YFDREAFL 305

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+ + +  +A   E+++  A  +R  +     H  EF  L+   A E +     D +
Sbjct: 306 AQSPQLAKQMAIAGDMERVYEIAPVFRAEDSNTHRHMTEFMGLDLEMAIEEHYHEAVDVL 365

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +        Q  F  +          E     E   R    +    L      D    
Sbjct: 366 DNMLIHIFRGLQTKFKHEIETVKKQFPCEDFLFLEKTLRLPFKEGMKLLREAGATDAE-- 423

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
                  G  +   D  S    ++L   +      +   ILD++P           P DP
Sbjct: 424 -------GNPIGELDDMSTENEKLLGRLVREKYNTD-YFILDKFPLAIRPFYTMPDPVDP 475

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
             +  ++ +    E+ +    + DP     R       K    +        +L      
Sbjct: 476 TLSNSYDFFMRGEEILSGAQRIHDPTFLVER------MKDVGIDPASM--TGYLDAFKLG 527

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P  +G  +G +R+VML     NI      P  
Sbjct: 528 APPHAGGGIGLERVVMLFLKLGNIRRASLFPRD 560


>gi|289548789|ref|YP_003473777.1| lysine--tRNA ligase [Thermocrinis albus DSM 14484]
 gi|289182406|gb|ADC89650.1| Lysine--tRNA ligase [Thermocrinis albus DSM 14484]
          Length = 290

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 82/315 (26%), Positives = 144/315 (45%), Gaps = 35/315 (11%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           +     +R +F E  F+E+ +  LQ  P  + ++      L+ +   +K ++L TSPE +
Sbjct: 6   SKFIDKVRSFFKERGFLEVHTPILQQYPNLDPNVEPMEV-LVKEKEGKKKMWLHTSPEHA 64

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            KK+L+  ++ IF     +RNGE G  H PEFTMLEWYR +  Y  L++D +++++    
Sbjct: 65  MKKILSKEKKDIFQICKVFRNGEWGRFHHPEFTMLEWYRINADYNLLIQDIVDLLKY--- 121

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                             + E +TV EAF  YA +            +  +        G
Sbjct: 122 -------------LGLSGDYETVTVEEAFEEYAGV--------ILSEEEEIFKNNLMAYG 160

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
                 + W  +F R+ I+ +E +LG    T L ++P   +  + +      + +RFELY
Sbjct: 161 YEFDMQEDWEALFYRVYID-VEKHLGQEKPTFLVKFPQRLAIYSKVKD---GYAERFELY 216

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
              +E+ N   E  DP   R R E   + +        P+DE+ +  +  MP  +G ++G
Sbjct: 217 IKGVEIANGWTEETDPTIIRQRMETFSRGRD------LPVDEELIKAMESMPPCAGCSIG 270

Query: 326 FDRLVMLVTGANNIN 340
            +RL M++   ++I 
Sbjct: 271 LERLFMVIHNIDDIR 285


>gi|150391128|ref|YP_001321177.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149950990|gb|ABR49518.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 432

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/338 (17%), Positives = 108/338 (31%), Gaps = 38/338 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
               +R     +  I  S R Y     F EI +  +  S G E     F+      ++  
Sbjct: 124 RRPNKRAVFKVQEEIVESFRNYLRGLGFSEIHTPKIVAS-GTEGGSEVFTV-----NYFD 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           +  +L  SP+F  + ++ AG E +F   HA+R        H  E+  L+        E+ 
Sbjct: 178 RRAFLAQSPQFYKQMMVGAGFEAVFEIGHAYRAELHNTWRHLNEYVSLDIEIGFIENEEE 237

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + D             Q+  S +                    +    DL    + P  P
Sbjct: 238 LMDLEEGFIKYLFKHLQETCSRE-------------------LKMLGKDLADINEIPRIP 278

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NI 251
              +  +       +    +  ++    +L + I+     +    + +YPA +  +    
Sbjct: 279 LSEVQQILLDGYDKKSPVGNIDAEG-EILLSQYIKEKYKSD-FVFITKYPAAKRPMYTMP 336

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
                  TK F+L    +E+      + D    +         K     E +   + +L 
Sbjct: 337 DDKGEGMTKSFDLIYKGLEITTGGQRIHDYQMLKE-----NIIKFGSNPEDF---DFYLE 388

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                MP   G A+G +RL M +    NI E    P  
Sbjct: 389 TFKYGMPPHGGFAIGLERLTMKILDLENIREATLFPRD 426


>gi|319958782|gb|ADV90561.1| lysyl-tRNA synthetase [Entamoeba nuttalli]
          Length = 463

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 8/250 (3%)

Query: 107 GEQGCLHQPE-FTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSE 164
            +      P  F   E  +  E +   +    +     A         + + +  +  + 
Sbjct: 14  EKFSKEPIPRPFNSAECSKVIEKHCTELNYYYDGNNEKAMKKLFADFVTEKKMVLDFTAP 73

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            + I+   A        +   LD P+      L  QA +     A   T + +  ++  +
Sbjct: 74  FKRISYVHALEEKFGEKIPRPLDGPEA--LAFLKKQAIRFNAICAEPQTTARVMDKLFGD 131

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            IE    +    ++   P   S LA  + ++P   +RFEL+    E+ NA  EL +PI Q
Sbjct: 132 LIE-VDLVQPTFVVT--PQLMSPLAKYHRSEPELIERFELFILKREIANAYTELNNPIVQ 188

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSGIAMGFDRLVMLVTGANNINEVI 343
           R  FE++ ++K    +E   +DE FL  +    P + G  +G DRL ML+   +NI EVI
Sbjct: 189 RSNFEQQAKDKAAGDDEAQLVDEVFLDAIEHAFPPTGGWGLGIDRLAMLLADVDNIKEVI 248

Query: 344 WTPFSQSNQE 353
             P  +   E
Sbjct: 249 LFPTMRPEDE 258


>gi|291391498|ref|XP_002712168.1| PREDICTED: aspartyl-tRNA synthetase [Oryctolagus cuniculus]
          Length = 501

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVMEEIADTLVQIFKGLQERFQTEIQMVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGRLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|291235466|ref|XP_002737659.1| PREDICTED: aspartyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 532

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 121/356 (33%), Gaps = 43/356 (12%)

Query: 6   SQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
           S+P  ++D     R                  +    RE  ++  F+EI +  +  +  +
Sbjct: 201 SRPTVHQDTRLDNRIIDLRTSTSQAIFRLEASVCQLFREVLMKQGFVEIHTPKMIGAA-S 259

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
           E     F+       + +   YL  SP+   + +LAA  ++++     +R  +     H 
Sbjct: 260 EGGANVFTV-----SYFKTKAYLAQSPQLYKQMVLAADFDRVWSIGSVFRAEDSNTHRHL 314

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF  L+       +   + D +  +        Q+    +    N              
Sbjct: 315 TEFIGLDLEMTFYYHYHEVVDLIGDMFVQIFRGLQERCKEEIDVVNKQYP---------- 364

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                ++    LD   + + H      ++AG  +   D  S    ++L + ++     + 
Sbjct: 365 -----MEPFKFLDPSLRLEYHEGIRMLKEAGFDIGFQDDLSTPAEKLLGKLVKAKYDTD- 418

Query: 235 CTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             ILD+YP           P DP+ +  ++++    E+ +    + DP     R  +   
Sbjct: 419 FFILDKYPLEVRPFYTMPDPNDPKSSNSYDMFMRGEEILSGAQRIHDPELLIERATE--- 475

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               I  E+      ++       P  +G  +G +R+ ML  G +NI +    P  
Sbjct: 476 --HGIGIESIKP---YIDSFRYGAPPHAGGGIGLERVTMLFLGLDNIRKTSLFPRD 526


>gi|78045531|ref|NP_001030257.1| aspartyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|110287976|sp|Q3SYZ4|SYDC_BOVIN RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|74267650|gb|AAI03320.1| Aspartyl-tRNA synthetase [Bos taurus]
          Length = 501

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE      F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAIFRLQSGICHPFRETLTNKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           QK F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVVEEIADTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AGI +  ++  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLVTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|24217390|ref|NP_714873.1| lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24202472|gb|AAN51888.1|AE011619_5 lysyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 338

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 98/330 (29%), Positives = 160/330 (48%), Gaps = 25/330 (7%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +  L++R    S LR++F +  ++E+D+  L+  P  E ++  F      +   ++  Y
Sbjct: 19  SQEVLIQRAKFLSVLRKFFEKRNYLEMDTPCLKPVPSMEPYLDPFLVRSPSK---KEKGY 75

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L TSPE+S K++L+ G EKI+   H +R+  E    H  EF MLE+Y    + E LM  C
Sbjct: 76  LITSPEYSLKEILSKGLEKIYEITHTFRSGEEGSPFHSAEFLMLEFYTVGITLEGLMDFC 135

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
            +++    +      F+ + V        + ++V E+  RYA   +  +  +    +  L
Sbjct: 136 TDLLEVLDQEFYSYGFNREQV--------QRMSVEESLKRYAFCGISKSELDRVITEHTL 187

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
             + A++            D F  + +  +E +L     T L  YP   +AL+ I     
Sbjct: 188 SEIPAEKRAYE--------DSFFIVFLNLVEKHLP-KGFTFLYDYPPELAALSKIRS--- 235

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
            F KRFELY  N+EL NA +EL DPIEQ  RF  E + +K +  E Y ID      L   
Sbjct: 236 GFAKRFELYFGNLELGNAFEELTDPIEQISRFRSERELRKNLGKEVYAIDSGLERALKEG 295

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +P S GI++G DRL++ + G +++ EV   
Sbjct: 296 IPDSCGISIGLDRLLLCILGGSSLREVSPY 325


>gi|257076701|ref|ZP_05571062.1| aspartyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 427

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 118/337 (35%), Gaps = 50/337 (14%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
                + +   +RE+  +  FIE+ +  +  +   E     F  E   ++      +L  
Sbjct: 132 IFQFESQLLFGIREFMNKENFIEVHTPKIV-AAATEGGADLFRVEYFEKNA-----FLNQ 185

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+   + L+A+G +K+F    A+R   E    H  EFT ++   A    ++ M+   N 
Sbjct: 186 SPQLYKEILIASGFDKVFEVGPAFRAEKENTVRHLNEFTSIDMEAAFIDDKKAMEYLENA 245

Query: 140 IRC----AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
           I        ++ + K+  +        +    I+  E    Y N D G  L+  D     
Sbjct: 246 ISYAVNRNIDLMHTKLEEYGYHLEKIETPFPRISY-EDGIEYLN-DHGLKLNFGDDFSPE 303

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
              + A++                             N    +  +P+           +
Sbjct: 304 ANKILAEK----------------------------FNGFYFITGWPSDMRPFYTHPDTN 335

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
           P  TK F+L   +IE+ +    + +         ++   KK +    +   E +      
Sbjct: 336 PALTKSFDLQLNDIEVTSGAQRIHNYKML-----EDNFMKKGLNKNDF---EFYEKAFKF 387

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            MP  +G  +G +RLVM +   NN+ E    P  ++ 
Sbjct: 388 GMPPHAGWGLGLERLVMNLLHLNNVRESTLFPRDRTR 424


>gi|134046818|ref|YP_001098303.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|166225358|sp|A4G0V5|SYD_METM5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|132664443|gb|ABO36089.1| aspartyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 438

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 115/341 (33%), Gaps = 47/341 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              + +     R+ +  S+R+ F +  F+E+++  L  S   G         TEL    +
Sbjct: 135 RRPKIQAIFKIRSEMLRSIRKTFADGGFVEVNTPKLVASATEGG--------TELFPISY 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + ++A G +K+F  A  +R  E     H  E   ++   +  + +
Sbjct: 187 FEKEAFLGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDTEMSFVNEK 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
             M                +   +       ++ P+ I + E                 D
Sbjct: 247 DAMAML-------------EKVVYNCYADIEYNRPQEIELLELNWEI-------PEKTFD 286

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           +         A   G+ +     W +  SR     +   +G      +  +P        
Sbjct: 287 KITYTEAIDIANAKGVEIE----WGEDLSRAAERAVGDEMG--GLYFITEWPTQTRPFYT 340

Query: 251 -IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
             +  D +  K F+L    +E+ +    +            E      +  +++   E +
Sbjct: 341 LPHKHDNKVCKAFDLMYKELEISSGAQRVHKYD-----LLVENISNMGMNPDSF---ETY 392

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           L      MP  +G  +G DR  M++T  +NI E +  P  +
Sbjct: 393 LEAFKFGMPPHAGWGLGADRFAMVLTAQDNIRECVLFPRDR 433


>gi|126652720|ref|XP_001388377.1| aspartate--tRNA ligase [Cryptosporidium parvum Iowa II]
 gi|126117470|gb|EAZ51570.1| aspartate--tRNA ligase [Cryptosporidium parvum Iowa II]
          Length = 532

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 53/355 (14%), Positives = 112/355 (31%), Gaps = 47/355 (13%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
            +D     R               ++ +   LRE+ +E +FIEI +  L     +E+   
Sbjct: 202 LQDVRLDNRVLDLRTYLSQAIFRIQSEVCRLLREFLIEREFIEIHTPKLLP-GASESGAT 260

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F       D+      L  SP+   +  +    E++F     +R        H  EF  
Sbjct: 261 VFKV-----DYFSNTACLAQSPQLHKQMSICGDLERVFEIGPVFRAENSNTHRHLCEFVG 315

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++     E+    + D  + +              + +  + ++      ++E   R   
Sbjct: 316 VDIEMNIENTYHELVDVFDAMFRHIFQGINTHCKNELLIVSEYNPFTPFVISEKTPRLT- 374

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI---FSRILIEKIEPNLGINCCT 236
                                 ++AG  +  D +  DI     R+L   ++     +   
Sbjct: 375 --------------FEEGCNLLKEAGAEIPEDLSDFDISTEQERLLGSIVKEKYNSDFYM 420

Query: 237 ILDRYPAPESALANIYPADP--RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
           +L +YP        +   D   +++  F+ +    E+ +    + D      R ++    
Sbjct: 421 ML-KYPLKVRPFYTMPDFDEPEKWSNSFDFFMRGEEILSGAQRVHDYDLLVKRCQEC--- 476

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   + +  D+L       P   G  +G +R++ML     NI +    P  
Sbjct: 477 ----GVSEHSL-RDYLNSFKLGAPPHGGCGIGLERVIMLFLNLGNIRKSSMFPRD 526


>gi|307596403|ref|YP_003902720.1| aspartyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307551604|gb|ADN51669.1| aspartyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 433

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 126/368 (34%), Gaps = 68/368 (18%)

Query: 4   IPSQPWW----NRDFHYRRRPFLLKR----------NMIQSSLREYFVENQFIEIDSM-S 48
           +P   W     + D   + R   LKR          + +  ++RE      FIE+ +   
Sbjct: 107 LPIDIWGSVETDLDTRLKYRSIDLKRPINSLIFRVESEVTRAIRETLYGRGFIEVFTPKI 166

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +  S      +  F+ +     +  +  YL  SP+   K+ L A  E++F  A A+R  +
Sbjct: 167 IVTSTEGGAEL--FTVQ-----YFERAAYLAQSPQLY-KEELTASLERVFEIAPAYRAEK 218

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H  EF  ++   A  +Y  +M    ++I    E  N+   +              
Sbjct: 219 HNTNYHLNEFISVDIEEAFANYMDVMDVLEDVIISVYERVNKVFSNELAKY--------- 269

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI-FSRILIEKI 226
                       I++        +           + G+++   D         +  E  
Sbjct: 270 -----------GIEIKIPKKPFRRITYDEALDMLSRRGLKINWGDDVPKNGLELLSEEFN 318

Query: 227 EPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           EP         +  +P    +       +DP+ ++ F+L    +E+ +    +    +  
Sbjct: 319 EP-------FFIIHFPTDLRAFYTKPLDSDPKISESFDLVIGGLEIASGSSRIHIKEQLI 371

Query: 286 HRFEKEMQEKKKI----YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINE 341
                    +K+       E++ +  D+      MP  +G  MG  RL+M++   +NI E
Sbjct: 372 E------ALRKRGLNPENFESHLMVYDY-----GMPPHAGWGMGLYRLLMVLLKRDNIRE 420

Query: 342 VIWTPFSQ 349
           V+  P  +
Sbjct: 421 VVLYPRDR 428


>gi|327260634|ref|XP_003215139.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 503

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 116/351 (33%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  ++  F+EI +  +  +  +E    
Sbjct: 177 NQDTRLDNRVIDLRTCTSQAVFRLQSGICQLFRETLIQKGFVEIQTPKIISAA-SEGGAN 235

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  +K+FC    +R  +     H  EF  
Sbjct: 236 VFTVSYFKSNA-----YLAQSPQLYKQMCICADFDKVFCIGPVFRAEDSNTHRHLTEFVG 290

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + D +           Q+ F  +    +     E     E   R   
Sbjct: 291 LDIEMAFNYHYHEVVDEIADTMVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR--- 347

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 348 ------------LEFPEALAMLREAGVEMGDEDDLSTPSEKLLGRLVKEKYDTD-FYILD 394

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 395 KYPLAVRPFYTMPDPKNPKTSNSYDMFMRGEEILSGAQRVHDPQLLTER-----AMHHGI 449

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 450 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLYLGLSNVRQTSMFPRD 497


>gi|229826510|ref|ZP_04452579.1| hypothetical protein GCWU000182_01885 [Abiotrophia defectiva ATCC
           49176]
 gi|229789380|gb|EEP25494.1| hypothetical protein GCWU000182_01885 [Abiotrophia defectiva ATCC
           49176]
          Length = 463

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/359 (16%), Positives = 105/359 (29%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++I  ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFQAVFRVRSLIAYAIHKFFQERDFVYVHTPIITGSDAEGAGEM--FRVTTLD 180

Query: 69  QDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            D++              +     L  S +    +  A   + I+ F   +R        
Sbjct: 181 LDNLPMGEDGKVDNSKDFFGKATNLTVSGQL-NGETYAMAFKNIYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M     +++                    F++     + E
Sbjct: 240 HAAEFWMIEPEIAFADLEDNMDLAEAMLKYIINYV----LENAPEEMAFFNQFIDKELIE 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                A  D G                  ++      +  +W           +   +  
Sbjct: 296 RLKGVAGSDFGRVSYTE-------AIELLKEHNDEFDYKVSWGCDLQTEHERYLTEKI-F 347

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        D      R    
Sbjct: 348 KRPVFVTDYPKDIKAFYMKLNEDGKTVAAMDCLVPGIGEIIGGSQREEDYDLLTGR---- 403

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              K+   NE    D DF   L      + +G  +GF+R VM +TG +NI +VI  P +
Sbjct: 404 --MKELGLNEA---DYDFYLDLRKYGSTRHAGFGLGFERCVMYLTGMSNIRDVIPFPRT 457


>gi|291461106|ref|ZP_06027024.2| asparagine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291378975|gb|EFE86493.1| asparagine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 462

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F EN F+ + +  +  S       +  F    +
Sbjct: 121 AHLRARTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEM--FRITTL 178

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +             K  +     L  S +    +   A    I+ F   +R       
Sbjct: 179 DLNKVPKKENGEVDFSKDFFGKSTNLTVSGQL-NGETYCAAFRNIYTFGPTFRAEYSNTA 237

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+    +++   +                F+      + 
Sbjct: 238 RHASEFWMIEPEIAFADLGANMELAEAMVKYIIKYV----MDNCPEEMEFFNSFIEKGLF 293

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D G                  +++G +      W           +     
Sbjct: 294 DKLNNVLNNDFGRVTYTE-------AIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +  +  +L A  I       +  D  E   +   E
Sbjct: 347 KKPV-FVTDYPKEIKAFYMKLNEDNKTVRAMDLLAPGIGEIIGGSQREDNYELLVKRMDE 405

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++       E Y   E +L          SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 406 LKL----DKEAY---EFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRT 456


>gi|190345858|gb|EDK37816.2| hypothetical protein PGUG_01914 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 432

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 107/333 (32%), Gaps = 29/333 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     +  +    RE+  +  F+EI +  L  +   E     F              YL
Sbjct: 120 QAIFKIQAGVGKLFREFLDKKGFVEIHTPKLLGAA-TEGGANVFEVTYFKSSA-----YL 173

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+F  ++L+AA  EK++  A  +R        H  EF  ++     E +   + D +
Sbjct: 174 AQSPQFYKQQLIAADFEKVYEVAPVFRAENSNTHRHMTEFMGMDLEMTFEEHYHEVLDNL 233

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
             +        +  ++ +          E                        + +    
Sbjct: 234 ADLFVYIFSELKSRYAKEIATVRRQYPMEEF-------------KLPKDGKMVRIEFKEG 280

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA-LANIYPADP 256
               ++AG  V   D  S    ++L + +      +   ILD++P           P DP
Sbjct: 281 VAMLREAGKDVGDFDDLSTENEKLLGKLVREKYDTD-FYILDKFPLAIRPAYTMPDPEDP 339

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
           R++  ++ +    E+ +    + DP   + R          I      +  D++      
Sbjct: 340 RYSNSYDFFMRGEEIMSGAQRIHDPELLKKRMIDL-----DIDPNAPGL-SDYIDAFTYG 393

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P  +G  +G +R++M      NI      P  
Sbjct: 394 CPPHAGGGIGLERVLMFYLDLKNIRRASLFPRD 426


>gi|51491207|emb|CAH18669.1| hypothetical protein [Homo sapiens]
          Length = 401

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 75  NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 133

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+F     +R  +     H  EF  
Sbjct: 134 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVG 188

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 189 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 245

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 246 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 292

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 293 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 347

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 348 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 395


>gi|258545301|ref|ZP_05705535.1| lysyl-tRNA synthetase family protein GenX [Cardiobacterium hominis
           ATCC 15826]
 gi|258519404|gb|EEV88263.1| lysyl-tRNA synthetase family protein GenX [Cardiobacterium hominis
           ATCC 15826]
          Length = 303

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 97/330 (29%), Positives = 146/330 (44%), Gaps = 42/330 (12%)

Query: 24  KRNMIQSSLREYFVEN-------QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL 76
            R++I    R +             +E+D+  L+     +  + + +             
Sbjct: 5   MRHLITRRAR-FLAAIRAFFAARGVLEVDTAQLRPCGVTDPQLVSLAASGG--------- 54

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           YLQTSPE++ K LLA G   I+  AH +R  EQG  H+ EF +LEWYR    + +LM + 
Sbjct: 55  YLQTSPEYAMKILLAQGAGDIYQLAHVFRGEEQGRKHRREFMLLEWYRTGYDHLRLMDEV 114

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
            +++R                      +      AEAF ++ + D+       ++ D H 
Sbjct: 115 ADLVRELLPAC-------------RAWQIRRTPYAEAFRQHLDADI-------ERLDDHG 154

Query: 197 LYLQAQQAGIRVAHDDTWSD-IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L           A      D +   +    +EP LG      L  YP  ++ALA I    
Sbjct: 155 LRALCTARLPESADWQLSRDAMLDLLFTHYVEPGLGRGTLEFLCDYPPSQAALARIID-- 212

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
                RFELY   +ELCN   EL D  EQR RF  +  E+ ++     P+DE FLA L  
Sbjct: 213 -GKAARFELYINGLELCNGFWELSDAREQRARFLADNSERAQLGLPEMPLDEAFLAALER 271

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            +P S+G+A+G DRL+ML  GA +I+EV+ 
Sbjct: 272 GLPDSAGVALGVDRLLMLACGAAHIDEVML 301


>gi|74139282|dbj|BAE38517.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +    A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCFCADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    +     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   +LD
Sbjct: 346 ------------LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTD-FYVLD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|332814503|ref|XP_003309311.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
          Length = 401

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 75  NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 133

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+F     +R  +     H  EF  
Sbjct: 134 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVG 188

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 189 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 245

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 246 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 292

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 293 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 347

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 348 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 395


>gi|220909288|ref|YP_002484599.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219865899|gb|ACL46238.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 467

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 101/356 (28%), Gaps = 41/356 (11%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAF---- 62
           H R R          RN    ++ ++F E  F+ + +  +  S      E          
Sbjct: 125 HLRSRTNTLGAVFRIRNACARAIHQFFQERGFLWVHTPIITASDCEGAGEMFAVTSLDLS 184

Query: 63  STELII-------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
              L         QD   +P YL  S +    +++A     ++ F   +R        H 
Sbjct: 185 KVPLTPDQKVDYSQDFFGRPTYLTVSGQLEA-EIMAMAFTNVYTFGPTFRAENSNTSRHL 243

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E  M      ++   +                  E + +      
Sbjct: 244 AEFWMVEPEMAFCDLEGDMDLAEAFLKFIFQHVLDTCPEDLAFCNQWVDESKSVLATAE- 302

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                          ++          +++         W           +   L    
Sbjct: 303 --------NIISHQFERITYTEAIALLEKSNHPFEFPVQWGLDLQSEHERYLAEQLFKKP 354

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEMQ 293
             I+  YP    A       D +  +          L     E++   ++  R E  E +
Sbjct: 355 V-IVTDYPKQIKAFYMRLNEDGKTVRAM------DVLAPKIGEIIGGSQREERLEVLEQR 407

Query: 294 EKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ++  +        +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 408 ISEQGLDLAPY--WWYLDLRRYGTVPHAGFGLGFERLVQFMTGIGNIRDVIPFPRT 461


>gi|179102|gb|AAA35567.1| aspartyl-tRNA synthetase [Homo sapiens]
          Length = 500

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 174 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 232

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+F     +R  +     H  EF  
Sbjct: 233 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVG 287

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 288 LDIEMAFNYHYHEVMEEIADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 344

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 345 ------------LEYCEALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILD 391

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +K ++++    E+ +    + DP     R           
Sbjct: 392 KYPLAVRPFYTMPDPRNPKQSKSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGN 446

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 447 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 494


>gi|307192131|gb|EFN75459.1| Aspartyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 527

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 117/351 (33%), Gaps = 50/351 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  I    R+   +  F+EI +  +  +  +E    
Sbjct: 208 NQDTRLDNRVLDLRTPANQAIFRVEAGICKLFRDILTKKGFVEIHTPKIISAA-SEGGAN 266

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  +AA  +K+F     +R  +     H  EF  
Sbjct: 267 VFTVSYFKSNA-----YLAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 321

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   + D +  +                                A  +   
Sbjct: 322 LDLEMAFKYHYHEVVDTIGQMFTDLYA----------------------DDIAAVNKQYA 359

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+   + +         +AG+ +  +D  S    ++L + ++     +   ILD
Sbjct: 360 VEPFKFLEPALRLEFPQAIELLAEAGVTLGEEDDLSTPDEKLLGKLVKAKYDTD-FYILD 418

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R      +   I
Sbjct: 419 KYPLAVRPFYTMPDPNNPKISNSYDMFMRGEEIISGAQRIHDPEFLTER-----AKHHGI 473

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+VML  G +NI +V   P  
Sbjct: 474 DIEKI---KSYIDAFRYGCPPHAGGGIGLERVVMLYLGLDNIRKVSMFPRD 521


>gi|169335764|ref|ZP_02862957.1| hypothetical protein ANASTE_02189 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258502|gb|EDS72468.1| hypothetical protein ANASTE_02189 [Anaerofustis stercorihominis DSM
           17244]
          Length = 463

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 112/356 (31%), Gaps = 41/356 (11%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++I  ++ E+F    F+ +++  +  S       +   +T  +
Sbjct: 122 AHLRPRGNSFNAVFRLRSLISFAIHEFFQTRDFVYVNTPLITASDCEGAGEMFQVTTLDM 181

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D      YL  S +   +    A  + ++ F   +R        H
Sbjct: 182 KNPPLNEEDSIDYTKDFFGAETYLTVSGQLQAEAYALA-FKNVYTFGPTFRAENSNTPRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M    ++++     A +K           F++     + E 
Sbjct: 241 AAEFWMVEPEIAFADLNDDMDLAEDLMKYVINYALEKA----GNEIEFFNKFVDKGLVER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N           +          ++A +   +   W           +       
Sbjct: 297 LKGIVN-------STFKRISYTEAIEILEKADVEFEYPVKWGLDLQTEHERYLTEKH-FG 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    +       E++   ++  R++  + 
Sbjct: 349 APVFVTDYPKEIKAFYMRMNDDNKTVAAVDLLVPGV------GEIIGGSQREERYDVLVS 402

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +++   +  +D  +L        + +G  +GF+RL+M ++G  NI +VI  P +
Sbjct: 403 RMEELGMNSGSMDW-YLDLRKYGGVKHAGFGLGFERLIMYLSGMKNIRDVIPFPRT 457


>gi|224543536|ref|ZP_03684075.1| hypothetical protein CATMIT_02745 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523538|gb|EEF92643.1| hypothetical protein CATMIT_02745 [Catenibacterium mitsuokai DSM
           15897]
          Length = 461

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 58/347 (16%), Positives = 110/347 (31%), Gaps = 35/347 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST---E 65
           H R R          R+++  ++ E+F +  F+ + +  +  +       +   +T    
Sbjct: 131 HLRPRANSFYAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITSNDGEGAGEMFRVTTIDDT 190

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYR 124
              +D   K  YL  + +    +  A     ++ F  A+R        H  EF M+E   
Sbjct: 191 DFSKDFFEKEAYLTVTGQLHV-EAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMVEPEI 249

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI-DLG 183
           A    E  M     +++   +                    E +   +   R   + D  
Sbjct: 250 AFADLEDDMCLIEEMVKYCIQYCLDNAPEEMKF-------FEQMVDHDCINRITKVRDSH 302

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                  +   HLL     +A ++  +   W    +      I   +       L  YP 
Sbjct: 303 FARMTYTEAIDHLL-----KADVKFDNKVEWGIDLNAEHERYICEEVVGGPV-FLTDYPK 356

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET- 302
              A       D +     +L    I       +  +  +   +   E    K +  ET 
Sbjct: 357 EIKAFYMRLNDDNKTVAACDLLVPGIGELVGGSQREERYDVLEKLMDE----KGMNKETL 412

Query: 303 -YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + +D   L       + +G  +GFDR +M +TG  NI +V   P +
Sbjct: 413 QWYMD---LRRFGGC-KHAGFGLGFDRFLMYLTGMANIRDVEPFPRT 455


>gi|197302918|ref|ZP_03167969.1| hypothetical protein RUMLAC_01646 [Ruminococcus lactaris ATCC
           29176]
 gi|197297999|gb|EDY32548.1| hypothetical protein RUMLAC_01646 [Ruminococcus lactaris ATCC
           29176]
          Length = 452

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 117/339 (34%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  I    R++  +  F EI +  +   S     ++          ++ 
Sbjct: 144 RNIRERAKFRIQEGIVRGFRDFLYQEGFTEIHTPKIGAKSAEGGANL-------FRLEYF 196

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P  LQ SP+F  +  +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 197 HRPAILQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 255

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +               +K ++ +                    +  NI +  T + P  
Sbjct: 256 DIMAMETGFLQYTMTLLEKEYARE-------------------LKILNIQVPKTKEIPAV 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +  L A++   ++ +          ++    +     +    +  YP+ +     +
Sbjct: 297 RFDEIKKLVAEKYDRKIKNPFDLEPEEEMLISRYAKEEWDAD-FVFVTHYPSKKRPFYAM 355

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               DP +T  F+L    +E+      + D  E   + E     K+ + +E     E +L
Sbjct: 356 DDPADPTYTLSFDLLFRGMEITTGGQRIHDYHELLAKME-----KRGMTDEGM---EQYL 407

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     MP   G+ +G +RL M +   +N+ E    P  
Sbjct: 408 SAFKHGMPPHGGLGIGMERLTMKMMNEDNVRETTLFPRD 446


>gi|69250886|ref|ZP_00605184.1| tRNA synthetase, class II (D, K and N) [Enterococcus faecium DO]
 gi|68193906|gb|EAN08486.1| tRNA synthetase, class II (D, K and N) [Enterococcus faecium DO]
          Length = 114

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 1/114 (0%)

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           ++  +P   S LA   P DPRFT RFEL+    E  NA  EL DPI+QR RFE + +E++
Sbjct: 1   MVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGREFANAFTELNDPIDQRERFEAQEKERE 60

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              +E + +DEDFL  L   MP + G+ +G DRLVML+T A +I +V+  P  +
Sbjct: 61  LGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 114


>gi|124484868|ref|YP_001029484.1| aspartyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|166225357|sp|A2SPG1|SYD_METLZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|124362409|gb|ABN06217.1| aspartyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 429

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 111/343 (32%), Gaps = 46/343 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              R       RN    ++ EY  +N F ++ +  +  +   G         TEL    +
Sbjct: 125 RKPRINAIFQIRNACLRAISEYLWDNGFTQVQTPKIVAAATEGG--------TELFPLAY 176

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + L++AG +++F     +R  E     H  E T ++   +  + E
Sbjct: 177 FDKEAFLNQSPQLYKQMLMSAGFDRVFEIGAIFRAEEHNTVRHLNEATSIDIEMSFANEE 236

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
             M    N++  A +                         A+           T    P 
Sbjct: 237 DAMHVLENVVASAYQYV-----------------------ADHCGDALATLGITDFKVPT 273

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA- 249
            P   + Y +A +          + D  S      +   +G      +  +P        
Sbjct: 274 VPFPRITYKEAIEISTAGGEPLVFGDDLSTAAERIVGEKMGT--MYFITEWPTSTRPFYT 331

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
             +   P   + F++    +EL +                ++++ K  +  + +   E +
Sbjct: 332 MPFEDRPEVCRAFDMMHPRMELTSGAQRCHIHS----LLVEQIKAK-GLNPDAF---EFY 383

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           L      MP  +G  +G +RLVM +    NI E +  P  +  
Sbjct: 384 LNPFRYGMPPHAGWGLGAERLVMTMLDLQNIREAVLFPRDRHR 426


>gi|39996258|ref|NP_952209.1| asparaginyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|59798572|sp|Q74E08|SYN_GEOSL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|39983138|gb|AAR34532.1| asparaginyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505271|gb|ADI83994.1| asparaginyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 461

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 101/358 (28%), Gaps = 46/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  +F E  F+ + +  +  S       +  F    +
Sbjct: 121 AHLRPRSNTFGAVFRVRSSLAQAVHRFFAERGFLYVHTPIITTSDCEGAGEL--FRVTTL 178

Query: 68  IQDH---------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                          +  +     L  S +   +    A    I+ F   +R        
Sbjct: 179 DPSAPPMADGAVDFSQDFFAAQAGLTVSGQLEGELFAQA-FSDIYTFGPTFRAENSNTPR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A            +  R                +   F+E     +  
Sbjct: 238 HAAEFWMIEPEMAFADLRDDAALAEDFFRYLCRHV----LDNCAEDMAFFNEHVDRGLLA 293

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              + A                 +     ++A +   +   W           +   +  
Sbjct: 294 RVEQVAGSSFAMMEYG-------VAIEHLKRAAVPFEYPVEWGLDLQTEHERYLTEQVVG 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-E 291
               ++  YP    A       D R     +L    +       E++   ++  R++  E
Sbjct: 347 GPVFVV-NYPQEIKAFYMRRNDDGRTVAAMDLLVPKV------GEIIGGSQREERYDLLE 399

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + ++            +L          +G  +GF+RL+M +TG  NI +VI  P +
Sbjct: 400 SRMREGGI--APESLWWYLDSRRWGSTPHAGFGLGFERLIMYLTGMENIRDVIPFPRT 455


>gi|16758642|ref|NP_446251.1| aspartyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|135099|sp|P15178|SYDC_RAT RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|203066|gb|AAA40789.1| aspartyl-tRNA synthetase [Rattus norvegicus]
 gi|1773257|gb|AAC52981.1| aspartyl-tRNA synthetase [Rattus norvegicus]
 gi|47938978|gb|AAH72534.1| Dars protein [Rattus norvegicus]
 gi|149058716|gb|EDM09873.1| rCG46287 [Rattus norvegicus]
 gi|161728829|dbj|BAF94235.1| aspartyl-tRNA synthetase [Rattus norvegicus]
 gi|161728850|dbj|BAF94255.1| aspartyl-tRNA synthetase [Rattus norvegicus]
          Length = 501

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRIIDLRTSTSQAIFHLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKSNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   +LD
Sbjct: 346 ------------LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTD-FYVLD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|146420576|ref|XP_001486243.1| hypothetical protein PGUG_01914 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 432

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 107/333 (32%), Gaps = 29/333 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     +  +    RE+  +  F+EI +  L  +   E     F              YL
Sbjct: 120 QAIFKIQAGVGKLFREFLDKKGFVEIHTPKLLGAA-TEGGANVFEVTYFKSLA-----YL 173

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+F  ++L+AA  EK++  A  +R        H  EF  ++     E +   + D +
Sbjct: 174 AQSPQFYKQQLIAADFEKVYEVAPVFRAENSNTHRHMTEFMGMDLEMTFEEHYHEVLDNL 233

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
             +        +  ++ +          E                        + +    
Sbjct: 234 ADLFVYIFSELKSRYAKEIATVRRQYPMEEF-------------KLPKDGKMVRIEFKEG 280

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA-LANIYPADP 256
               ++AG  V   D  S    ++L + +      +   ILD++P           P DP
Sbjct: 281 VAMLREAGKDVGDFDDLSTENEKLLGKLVREKYDTD-FYILDKFPLAIRPAYTMPDPEDP 339

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
           R++  ++ +    E+ +    + DP   + R          I      +  D++      
Sbjct: 340 RYSNSYDFFMRGEEIMSGAQRIHDPELLKKRMIDL-----DIDPNAPGL-SDYIDAFTYG 393

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P  +G  +G +R++M      NI      P  
Sbjct: 394 CPPHAGGGIGLERVLMFYLDLKNIRRASLFPRD 426


>gi|74141887|dbj|BAE41011.1| unnamed protein product [Mus musculus]
          Length = 501

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRVIDLRTSTSQAIFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  E   
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTECVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + +           Q+ F  +    +     E     E   R   
Sbjct: 289 LDIEMAFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   +LD
Sbjct: 346 ------------LEYCEALAMLREAGVEMDDEEDLSTPNEKLLGRLVKEKYDTD-FYVLD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|298492161|ref|YP_003722338.1| asparaginyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234079|gb|ADI65215.1| asparaginyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 463

 Score =  165 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/359 (17%), Positives = 118/359 (32%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN   +++ ++F E  F+ + +  +  S       +  FS   +
Sbjct: 122 AHLRSRTNSFGAVFRVRNACATAIHQFFQERDFLWVHTPIITASDCEGAGEL--FSVTNL 179

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                            D   KP YL  S +    +++A     ++ F   +R       
Sbjct: 180 DFKKIPRTGNQDIDYSQDFFSKPAYLTVSGQLEA-EIMAMAFTNVYTFGPTFRAENSNTS 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E  M      ++   +   +        +   F+E    TV 
Sbjct: 239 RHLAEFWMVEPEMAFCDLEGDMDLAEEFLKYIFKYVLETC----TQDMEFFNERIDRTVL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E              +  ++          ++A ++  +  TW           +   L 
Sbjct: 295 ETADYI-------ISNQFERLSYTDAVKFLEKADVKFDYPVTWGTDLQSEHERYLAEQLF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                ++  YPA   A       D +  +  ++    I       E++   ++  R   +
Sbjct: 348 KKPV-VVTDYPAGIKAFYMRLSDDEKTVRAMDILVPKI------GEIIGGSQREERL--D 398

Query: 292 MQEKKKIYNETYPID-EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + EK+ +     P D   +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 399 VLEKRVLDQGMNPEDLWWYLDLRRYGTVPHAGFGLGFERLVQFMTGMGNIRDVIPFPRT 457


>gi|229918735|ref|YP_002887381.1| asparaginyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229470164|gb|ACQ71936.1| asparaginyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 435

 Score =  165 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 65/353 (18%), Positives = 113/353 (32%), Gaps = 49/353 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF 62
           + ++  W R    R+   +  RN I  +  E+F +  F++ID   L  S P         
Sbjct: 118 MDNRHLWLRSR--RQHAIMKVRNEIIRATYEFFNKEGFVKIDPPILTSSAPEG------- 168

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +  YL  + +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 169 TTELFETDYFGQSAYLSQTGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 227

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   ++  ++     +   A+ A                    +   +        D
Sbjct: 228 PEMAFVDHDMNLEIQEQYVSYIAQSA--------------------LANCKNELELLGRD 267

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           L           R       +        D  + D F       I      +    +  +
Sbjct: 268 LEKLAQVQAPFPRVRYEDAIKFLKAEGFDDIEYGDDFGAPHETAIA--NAHDQPVFITHW 325

Query: 242 PAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRH----RFEKEMQEKK 296
           P           P +P      +L A          E++    QR     R ++E+   K
Sbjct: 326 PKEIKPFYMKVDPENPELVLCADLIAP-----EGYGEIIGGS-QREDDYDRLKEEII--K 377

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +ET   D  +L          SG  +G +R V  ++G  +I E I  P  
Sbjct: 378 EGLDETDAYDW-YLELRQYGSVPHSGFGLGLERTVAWISGIEHIREAIPFPRL 429


>gi|320101107|ref|YP_004176699.1| aspartyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753459|gb|ADV65217.1| aspartyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 420

 Score =  165 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 48/345 (13%), Positives = 113/345 (32%), Gaps = 38/345 (11%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W    +   +     R+ + ++ REY   N F E+ +  +  + G E     F  + 
Sbjct: 107 KYRWLLVRNPVEKAIFRVRSAMLAAAREYLSSNGFTEVQTPKIV-AAGAEGGATLFRVQ- 164

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
               +     YL  SP+   + L+A    +++     +R  +     H  E   ++  + 
Sbjct: 165 ----YFENEAYLSQSPQLFKQMLMAG-FTRVYEITPYFRAEKYNTTRHLNESWGIDVEQG 219

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             +  + + + +  +         +  + +                        ++L   
Sbjct: 220 FINSLEDVLNTLENLVAYIIDYVSRNNAEE-------------------LEVLGVNLRKP 260

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                +          +  GI V+  +  SD   + L E +           +  +P   
Sbjct: 261 STPFKRLRFQEAVDILRSEGIEVSDTEDLSDQAEKKLGEIMAEKGHD--LYFIVGFPWSS 318

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +    +   +  +T++F+L    +E+ +          +  R  +    ++K  N     
Sbjct: 319 TGFYYMREENGVYTRKFDLDYRGLEIASGGQREH----RYERLVE--ALREKGLNPASF- 371

Query: 306 DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            + +L      MP   G  +G +RL+M + G  N+ E I     +
Sbjct: 372 -DFYLEAFKYGMPPHGGFGLGVERLLMRMLGLENVREAILFVRDR 415


>gi|117606291|ref|NP_001071079.1| aspartyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|117167927|gb|AAI24801.1| Zgc:154056 [Danio rerio]
          Length = 531

 Score =  165 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ +    R+  +   F+EI +  +  +  +E    
Sbjct: 205 NQDTRLDNRVIDLRTTTSQAIFRLQSGVCQLFRDTLINKGFVEIQTPKIISAA-SEGGAN 263

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  + A  +K+FC    +R  +     H  EF  
Sbjct: 264 VFTVSYFKTSA-----YLAQSPQLYKQMCICADFDKVFCVGPVFRAEDSNTHRHLTEFVG 318

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + D                 +   V         + T  +   +   
Sbjct: 319 LDIEMAFSYHYHEVIDS---------------ITDTMVQIFKGLRDRFQTEIQTVNKQYP 363

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            +    L+   + +        + AG+ +  ++  S    ++L   ++     +   +LD
Sbjct: 364 SEPFKFLEPTLRLEYKEGLAMLRAAGVEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYVLD 422

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+++  ++++    E+ +    + D      R          I
Sbjct: 423 KYPLAVRPFYTMPDPNNPKYSNSYDMFMRGEEILSGAQRIHDAQLLTER-----AMHHNI 477

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 478 DLEKI---KAYIDSFRYGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRD 525


>gi|311272131|ref|XP_003133314.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]
          Length = 501

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 175 NQDTRLDNRIIDLRTSTSQAVFRLQSGICHLFRENLINKGFVEIQTPKIISAA-SEGGAN 233

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 234 VFTVSYFKNNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 288

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++       +   + + +           Q+ F  +    N     E     E   R   
Sbjct: 289 MDIEMVFNYHYHEVVEEIADTLVQIFKGLQERFQTEIQMVNKQFPCEPFKFLEPTLR--- 345

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AGI +  ++  S    ++L   ++     +   ILD
Sbjct: 346 ------------LEYCEALAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 392

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 393 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 447

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 448 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 495


>gi|320169209|gb|EFW46108.1| lysyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 583

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 76/329 (23%), Positives = 126/329 (38%), Gaps = 46/329 (13%)

Query: 4   IPSQPW--WNRDFHYRRRP------------FLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           IP  P+   + D   R+R              L  R+ I  S+R       FIE+++ SL
Sbjct: 258 IPDIPFKLTDPDIRARQRALDMLANPQLIPRMLKTRHAIFRSIRRMMDAQGFIEVETPSL 317

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + R F T+         PL L+ +PE   K+L+  G ++++     +RN   
Sbjct: 318 CALAGGA-NARPFITKARAIS--GHPLNLRIAPELYLKQLVIGGIDRVYEIGKQFRNEGM 374

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ-------------------- 149
              H PEFT +E Y+A+ +++ L     +++      A Q                    
Sbjct: 375 DADHHPEFTTMEMYQAYANFDDLFDFTESLLVSTLNEAKQADKVLAGVFQHHQRVAPKSE 434

Query: 150 -----KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
                   S+Q    +     + I++  A        L          D   L+ + +  
Sbjct: 435 EGSDPLSISYQGQTISFQRPFKRISIMPALEEALGEPLPDLAAPTATQDLINLFERRKFH 494

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFEL 264
           G+      T   +   ++   +EP       T L  +P   S LA   P +P  + RFEL
Sbjct: 495 GLPQPP--TIPKMIDELVSLFLEPQC--INPTFLCYHPKAMSPLARESPENPALSLRFEL 550

Query: 265 YACNIELCNACDELLDPIEQRHRFEKEMQ 293
           +    E+CNA  EL +P EQR RF ++ +
Sbjct: 551 FVNGFEICNAYAELNNPHEQRARFAEQAK 579


>gi|160914297|ref|ZP_02076516.1| hypothetical protein EUBDOL_00305 [Eubacterium dolichum DSM 3991]
 gi|158433770|gb|EDP12059.1| hypothetical protein EUBDOL_00305 [Eubacterium dolichum DSM 3991]
          Length = 482

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 61/345 (17%), Positives = 107/345 (31%), Gaps = 31/345 (8%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETH----IRAFSTE 65
           H R R          R+++  ++ E+F +  F+ + +  +  + G               
Sbjct: 152 HLRPRANTFYAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITGNDGEGAGEMFRATTIDNT 211

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYR 124
               D   K  +L  + +    +  A     ++ F  A+R        H  EF M+E   
Sbjct: 212 EFENDFFGKESFLTVTGQLHV-EAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEI 270

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A    E  M    ++I+   +   +                  +   E  AR A +    
Sbjct: 271 AFADLEDNMNLIEDMIKYCIDYVLENAPEEMKF-------FNSMIDKECIARIAKVRDSE 323

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                      LL    +QA ++  +   W    +      I   + I+    L  YP  
Sbjct: 324 FKRMTYSEAIELL----KQADVKFENKVEWGMDLNSEHERYICEKI-IDGPVFLTDYPKD 378

Query: 245 ESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
             A       D +     +L    + EL               R  +    K    N  +
Sbjct: 379 IKAFYMRLNDDNQTVAACDLLVPGVGELVGGSQREERYDVLDKRMSEMGMTK---DNLQW 435

Query: 304 PIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +D   L         +G  +GFDRL+M +TG  NI +V   P +
Sbjct: 436 YMD---LRRFGGCR-HAGFGLGFDRLLMYLTGMQNIRDVEPFPRT 476


>gi|255722135|ref|XP_002546002.1| aspartyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240136491|gb|EER36044.1| aspartyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 578

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 115/361 (31%), Gaps = 45/361 (12%)

Query: 6   SQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQ 50
           ++       +   R                   ++ +    RE+ ++  F EI +   + 
Sbjct: 239 AEELGLPGVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLIKKNFTEIHTPKIIA 298

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
            +    ++       +   ++ +   +L  SP+   ++L+AA  EK+F  A  +R     
Sbjct: 299 AASEGGSN-------VFQINYFKGSAFLAQSPQLYKQQLIAADFEKVFEIAPVFRAENSN 351

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EFT L+   A E +   + + +  +        +  FS +          E   
Sbjct: 352 THRHMTEFTGLDLEMAFEQHYDEVLEVLEELFVFIFTELKTRFSKEIAAVRRQFPVEEF- 410

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
                                +          ++AG  V   +  S    ++L + +   
Sbjct: 411 ------------KIPKDGKMVKLHFKEGIAMLREAGKDVDDFEDLSTENEKLLGKLVREK 458

Query: 230 LGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   ILD++P             DPR++  ++ +    E+ +    + DP   + R 
Sbjct: 459 YDTD-FYILDKFPLAVRPFYTMPDAEDPRYSNSYDFFMRGEEILSGAQRIHDPELLKER- 516

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 +    N   P   D++       P  +G  +G +R+VM      NI      P 
Sbjct: 517 -----IRAHEVNPDVPGLSDYVDAFTYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPR 571

Query: 348 S 348
            
Sbjct: 572 D 572


>gi|10798642|emb|CAC12821.1| lysyl-tRNA synthetase [Nicotiana tabacum]
          Length = 169

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  +P   S LA  + + P  T+RFEL+    ELCNA  EL DP+ QR RF  ++++
Sbjct: 7   PTFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELCNAYTELNDPVVQRQRFADQLKD 66

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           ++   +E   +DE+F   L   +P + G  +G DRL ML+T + NI EV+  P  +   E
Sbjct: 67  RQSGDDEAMALDENFCTALEYGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFPAMKPQDE 126


>gi|229815818|ref|ZP_04446142.1| hypothetical protein COLINT_02867 [Collinsella intestinalis DSM
           13280]
 gi|229808513|gb|EEP44291.1| hypothetical protein COLINT_02867 [Collinsella intestinalis DSM
           13280]
          Length = 467

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 108/356 (30%), Gaps = 36/356 (10%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R++  +++  +F +  F+ +++  +  S       +   +T  
Sbjct: 122 QQHLRPRTNLFRAVFRVRSVAAAAIHRFFQDRGFVYVNTPIITASDCEGAGEMFHVTTID 181

Query: 67  IIQDHIR--------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                +         +  +     L  S + + +    A    ++ F   +R        
Sbjct: 182 PANPPLDDKGNVDFSQDFFGTTASLTVSGQLNAENFAMA-FGDVYTFGPTFRAENSNTTR 240

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M    ++++                     ++     + E
Sbjct: 241 HAAEFWMIEPEIAFADLADDMDLAEDMLKYVIRDV----MDRCPDELAMLNKFVDKGLIE 296

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                AN D           D   +   A  AG +  +  +W           +      
Sbjct: 297 RLTHVANSDFARVTY----TDAVKILEDAVAAGHQFDYPVSWGIDLQTEHERFLTEEH-F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
            C T +  YPA   A       D +     +     I       +  + +E   R   E+
Sbjct: 352 KCPTFVTDYPAEIKAFYMRLNDDGKTVAAADCLVPGIGEIIGGSQREERLEVLERRIAEL 411

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +  E Y    D         + +G  +GF+RLVM +TG  NI +V+  P +
Sbjct: 412 ----GMDPEQYKYYLDLRR--YGTCKHAGFGLGFERLVMYLTGVGNIRDVLPHPRT 461


>gi|28209914|ref|NP_780858.1| asparaginyl-tRNA synthetase [Clostridium tetani E88]
 gi|38258347|sp|Q899M9|SYN_CLOTE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|28202349|gb|AAO34795.1| asparaginyl-tRNA synthetase [Clostridium tetani E88]
          Length = 463

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 104/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +  F    +
Sbjct: 122 AHLRPRSNTFSAVFRIRSLAAYAVHKFFQEKNFVYVHTPIITASDCEGAGEM--FRVTTL 179

Query: 68  IQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +                  K   L  S + S +    A    ++ F   +R       
Sbjct: 180 DLNNIPKNDEGKIDFSQDFFDKDAKLTVSGQLSAESYALA-FGNVYTFGPTFRAENSNTA 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M     +++                  N F+      + 
Sbjct: 239 RHASEFWMIEPEMAFADLTDYMDVAEEMVKYIINYV----LENAPEEMNFFNSFIDKDLF 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N +                    Q++G +  +   W           I   + 
Sbjct: 295 KRLDNVVNSEFKRITYTE-------AVDLLQKSGEKFQYPVEWGIDLQTEHERYITEKI- 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    +       E++   ++  R +  
Sbjct: 347 FGKPVFVTDYPKDIKAFYMRLNEDNKTVAAADLLVPGV------GEIIGGSQREERLDVL 400

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +  K+           +L        + SG  +GF+R++M +TG +NI +VI  P +
Sbjct: 401 EERMKEFDLNEKDY-WWYLELRKYGSAKHSGFGLGFERILMYMTGISNIRDVIPFPRT 457


>gi|210632478|ref|ZP_03297406.1| hypothetical protein COLSTE_01308 [Collinsella stercoris DSM 13279]
 gi|210159573|gb|EEA90544.1| hypothetical protein COLSTE_01308 [Collinsella stercoris DSM 13279]
          Length = 467

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 108/356 (30%), Gaps = 36/356 (10%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R++  +++  +F +  F+ +++  +  S       +   +T  
Sbjct: 122 QQHLRPRTNLFRAVFRVRSVAAAAIHRFFQDRGFVYVNTPIITASDCEGAGEMFHVTTID 181

Query: 67  IIQDHIR--------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                +         +  +     L  S + + +    A    ++ F   +R        
Sbjct: 182 PANPPLDDKGNVDFSQDFFGTAASLTVSGQLNAENFAMA-FGDVYTFGPTFRAENSNTTR 240

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M    ++++                     ++     + E
Sbjct: 241 HAAEFWMIEPEIAFADLADDMNLAEDMLKYVIRDV----MDRCPDELAMLNKFVDKGLIE 296

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                AN D           +   +  QA  AG    +  +W           +      
Sbjct: 297 RLTHVANSDFARVTY----TEAVEILEQAVSAGHTFDYPVSWGIDLQTEHERFLTEEH-F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
            C T +  YPA   A       D +     +     I       +  + ++   R   E+
Sbjct: 352 KCPTFVTDYPAEIKAFYMRLNDDGKTVAAADCLVPGIGEIIGGSQREERLDVLERRIAEL 411

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +  E Y    D         + +G  +GF+RLVM +TG  NI +V+  P +
Sbjct: 412 ----GMDPEQYKYYLDLRR--YGTCKHAGFGLGFERLVMYLTGVGNIRDVLPHPRT 461


>gi|126180091|ref|YP_001048056.1| aspartyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|166225360|sp|A3CXH4|SYD_METMJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|125862885|gb|ABN58074.1| aspartyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 429

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 107/343 (31%), Gaps = 46/343 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              R R     R+ +  +   +      I I +  +  +   G         TEL    +
Sbjct: 125 RKPRVRAIFFIRSAVTCAATAFLASRGCINIATPKIVAAATEGG--------TELFPIAY 176

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYE 130
             K  ++  SP+   + ++AAG E +F     +R  E     H  E T L+   +   + 
Sbjct: 177 FEKEAFMNQSPQLYKQMMMAAGFEAVFEIGPIFRAEEHNTVRHLNEATSLDVEVSFADHN 236

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+   ++I    +   +                              IDL        
Sbjct: 237 DVMELLEDLIVHVYDHVAKDCSEHLAE--------------------LEIDLKVPSKPFP 276

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA- 249
           +         A +    +     + D  S      I   +G      +  +P        
Sbjct: 277 RIPYAEAIEIANK---TIEEKLAFGDDLSPAAERAIGDTVG--QHYFIVDWPTDIRPYYA 331

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
             YP  P F K F+L    +EL +    + D      R        K +  E++   E +
Sbjct: 332 MPYPDRPEFCKAFDLMHPRMELSSGAQRIHDHDLLVERISA-----KGLSPESF---EFY 383

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           L      MP  +G  +G +RLVM +    NI E +  P  +  
Sbjct: 384 LKPFRYGMPPHAGWGLGIERLVMTMLDLPNIREAVLFPRDRHR 426


>gi|291549449|emb|CBL25711.1| aspartyl-tRNA synthetase, archaeal type [Ruminococcus torques
           L2-14]
          Length = 443

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 118/339 (34%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  I    R++  +  F EI +  +   S     ++          ++ 
Sbjct: 135 RNIRERAKFRIQEGIVRGFRDFLYKEGFTEIHTPKIGAKSAEGGANL-------FRLEYF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P  LQ SP+F  +  +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 188 HRPAILQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +               +K ++ +                    +  NI++  T + P  
Sbjct: 247 DIMAMETGFLQYTMELLKKEYARE-------------------LQILNIEVPKTDNIPAV 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +  L +++   ++ +          ++    +     +    +  YP+ +     +
Sbjct: 288 RFDEIKRLVSEKYDRKIKNPFDLEPEEETLISRYAKEEWDAD-FVFVTHYPSKKRPFYAM 346

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               DP +T  F+L    +E+      + D  E   + E     K+ + +E     E +L
Sbjct: 347 DDPEDPTYTLSFDLLFRGMEITTGGQRIHDYHELLAKME-----KRGMTDEGM---EQYL 398

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     MP   G+ +G +RL M +   +N+ E    P  
Sbjct: 399 SAFKHGMPPHGGLGIGMERLTMKMMNEDNVRETTLFPRD 437


>gi|242280171|ref|YP_002992300.1| asparaginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242123065|gb|ACS80761.1| asparaginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 463

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 112/357 (31%), Gaps = 42/357 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++ +YF +  F  + +  +  S       +  F    +
Sbjct: 121 AHLRPRTNKFGAMFRIRSELSYAIHKYFRDKGFFYVHTPIITGSDCEGAGEM--FRVTSL 178

Query: 68  IQ--------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                           D   K  +L  S +   +    +   +++ F   +R  +     
Sbjct: 179 DHAALSSMKKEDQAANDFFGKESHLTVSGQLDAEMYALS-LGQVYTFGPTFRAEKSNTPR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M     +++       +K       +   F++    T+ +
Sbjct: 238 HAAEFWMVEPEVAFADLNDNMDLGEEMVKYLINHVLEKC----ADDIELFAKFVDKTLMD 293

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 + D           D   L  + ++A     + +   D+ +       E +   
Sbjct: 294 TLRNTLDNDFERIRY----EDAVNLLQRCKKAKKFEYYPEYGQDLQTEHERYLTEKH--F 347

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               I+  YP            D +     +L    I       EL+   ++  R +   
Sbjct: 348 KKPVIVYDYPKEIKPFYMRMNDDGKTVAAMDLLVPRI------GELVGGSQREERLDVLE 401

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +   E+      +L          +G  MGF+R++ML+TG  NI +VI  P +
Sbjct: 402 SRIAETGMESEDY-WWYLDSRRFGSAPHAGFGMGFERMLMLLTGVTNIRDVIPFPRT 457


>gi|282900612|ref|ZP_06308554.1| Asparaginyl-tRNA synthetase, class IIb [Cylindrospermopsis
           raciborskii CS-505]
 gi|281194412|gb|EFA69367.1| Asparaginyl-tRNA synthetase, class IIb [Cylindrospermopsis
           raciborskii CS-505]
          Length = 463

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 113/358 (31%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN   +++ ++F +  F+ + +  L  S       +  FS   +
Sbjct: 122 AHLRSRTNSFGAVFRVRNACATAIHQFFQQRGFMWVHTPILTASDCEGAGEL--FSVTSL 179

Query: 68  ---------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGC 111
                           QD   KP YL  S +    +++A     ++ F   +R       
Sbjct: 180 NLQDIPRKENQDVDYSQDFFGKPTYLTVSGQLEA-EIMAMAFTNVYTFGPTFRAENSHTS 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E  M      ++                +   F++    TV 
Sbjct: 239 RHLAEFWMVEPEMAFCDLEGDMNLAEEFLKHIFRYV----MENCEQDMEFFNQRIDNTVL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N       +  ++          ++A ++  +   W           +   L 
Sbjct: 295 ETAENIVN-------NQFERLSYTDAIQILEKAEVKFDYPVEWGLDLQSEHERYLAEQLF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                I+  YPA   A       D +  +  ++      L     E++   ++  R +  
Sbjct: 348 KKPV-IVTDYPAQIKAFYMKLNNDEKTVRAMDI------LAPKIGEIIGGSQREERLDIL 400

Query: 292 MQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +       +   +   +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 401 ERRILAQGMKPEDL-WWYLDLRRYGTVPHAGFGLGFERLVQFMTGMGNIRDVIPFPRT 457


>gi|186681358|ref|YP_001864554.1| asparaginyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186463810|gb|ACC79611.1| asparaginyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 463

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/355 (15%), Positives = 109/355 (30%), Gaps = 41/355 (11%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF------ 62
           H R R          RN   +++ ++F +  F+ + +  +  S       + +       
Sbjct: 123 HLRSRTNSFGAVFRVRNACSTAIHQFFQQRGFLWVHTPIITASDCEGAGELFSVTSLDLK 182

Query: 63  ---STELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
               TE    D+      KP YL  S +    +++A     ++ F   +R        H 
Sbjct: 183 NIPRTENQAVDYSQDFFAKPTYLTVSGQLEA-EVMAMAFSNVYTFGPTFRAENSNTSRHL 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E  M      ++   +   +              +    T     
Sbjct: 242 AEFWMVEPEMAFCDLEGDMDLAEAFLKHIFKYVLETCPEDMEFFNERIDKSVLATAE--- 298

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                       +  ++          ++A ++  +  +W           +        
Sbjct: 299 --------NIINNQFERLTYTEAIKVLEKADVKFEYPVSWGLDLQSEHERYLAEQQFKKP 350

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YPA   A       D +  +  ++      L     E++   ++  R E   + 
Sbjct: 351 V-IVTDYPAQIKAFYMRLNDDEKTVRAMDI------LAPKIGEIVGGSQREERLEVLERR 403

Query: 295 KKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +   +   +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 404 VLAQGLKPEEL-WWYLDLRRYGTVPHAGFGLGFERLVQFMTGMGNIRDVIPFPRT 457


>gi|48478286|ref|YP_023992.1| aspartyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|62287564|sp|Q6KZQ3|SYD_PICTO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|48430934|gb|AAT43799.1| aspartyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 423

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 109/337 (32%), Gaps = 51/337 (15%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               ++ +   +REY     FIE+ +  +  +   E     F  +     +  +  YL  
Sbjct: 129 IFKAQSTLLWGIREYLNRLGFIEVHTPKIV-AAATEGGADLFPVK-----YFERDAYLNQ 182

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+   + L+AAG EK+F    A+R  ++    H  EFT ++   +   +  +M    N 
Sbjct: 183 SPQLYKEILMAAGFEKVFEVGPAFRAEKENTLRHLNEFTSIDIEMSFADHNDVMDVLENT 242

Query: 140 IRCAAEVA----NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
           ++ A          ++        +       IT  EA      ID   +          
Sbjct: 243 VKNAINTLKNNLGDELNKHGFNIDSINGRIPRITYREA------IDYLNSSGFQMNFGDD 296

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                A+  G R                              +  +P        +   D
Sbjct: 297 FSPEAARVLGERYKS------------------------FYFITEWPVSLRPFYTMKKDD 332

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              TK F+L    +E+C+    +    +           K K  N        +L+    
Sbjct: 333 -ETTKSFDLQLRELEICSGAQRIHRYDDLV------NNIKNKGLNPESF--TFYLSAFRY 383

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            MP  +G A+G +RL M + G  N+ E    P  ++ 
Sbjct: 384 GMPPHAGWAIGLERLTMNLLGIKNVRETTLFPRDRTR 420


>gi|297620027|ref|YP_003708132.1| aspartyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379004|gb|ADI37159.1| aspartyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 438

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/341 (17%), Positives = 109/341 (31%), Gaps = 47/341 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              + +     R  +  S+R  F +N FIE+++  L  S   G         TEL    +
Sbjct: 135 RRPKIQALFKIRAEMLKSVRNTFNDNGFIEVNTPKLVASATEGG--------TELFPISY 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + ++A G +++F  A  +R  E     H  E   ++   +     
Sbjct: 187 FEKEAFLGQSPQLYKQMMMAGGFDRVFEIAQIFRAEEHNTRRHLNEAVSIDMEMSFSDEY 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
             M    +I+      + + I   +                        I+         
Sbjct: 247 DAM----DILEKVVYNSYKDIAENRADEI----------------ETLGINFEVPDKKFT 286

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA- 249
           +         A   G+ +     W +  SR   + +   +G      +  +P        
Sbjct: 287 KLTYSEAVDIANGKGVELE----WGEDLSRAAEKAVGDEMG--GLYFITEWPTITRPFYT 340

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
             Y  D +  K F+L    +E+ +    +            E   K  +  E +     +
Sbjct: 341 MPYEKDNKICKAFDLMYKELEITSGAQRVHKYD-----LLVENISKMGMNPEGFGT---Y 392

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           L      MP  +G  +G DR  M++    NI E +  P  +
Sbjct: 393 LEAFEYGMPPHAGFGLGADRFAMILGQEENIRECVLFPRDR 433


>gi|320170631|gb|EFW47530.1| aspartyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 531

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 118/349 (33%), Gaps = 43/349 (12%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               ++ +    RE+     FIEI S  +  +  +E+    F
Sbjct: 207 DTRLDNRVIDLRTTTNQAIYRLQSAVCLLFREFLTSQNFIEIHSPKIIGTA-SESGANVF 265

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +       + ++  YL  SP+F  +  + A  E++F  A  +R  +     H  EF  L+
Sbjct: 266 AVT-----YFKQQAYLAQSPQFYKQMAMCADFERVFEIAPVFRAEDSNTHRHLTEFVGLD 320

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +   + D ++ +        +  ++ +                E   R     
Sbjct: 321 LEMAFYEHYHEVLDMLDKLFVFIFKGLRDRYANEIKAVQRQFPVPEFKFLEPSLRIT--- 377

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++AGI +   D  S    ++L + I+     +   +LD++
Sbjct: 378 ------------FKEGVAMLREAGIEMDDYDDLSTANEKLLGKLIKAKYDTD-FYMLDKF 424

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           P+DP ++  ++L+    E+ +    + DP+    R     +EK    +
Sbjct: 425 PTAVRPFYTMPDPSDPNYSNSYDLFMRGEEILSGAQRVHDPVLLEER----AKEKHIEIS 480

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P    ++       P   G  +G +R++ML  G  NI      P  
Sbjct: 481 SIQP----YVDAFKYGAPPHGGGGIGLERVLMLYLGLGNIRRTSMFPRD 525


>gi|296413417|ref|XP_002836410.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630228|emb|CAZ80601.1| unnamed protein product [Tuber melanosporum]
          Length = 552

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/333 (17%), Positives = 113/333 (33%), Gaps = 29/333 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +      + + +  +EY +++ F+E+ +  L  +  +E     F        +  +  YL
Sbjct: 240 QAIFNISSAVCTLFKEYLLKHNFVEVHTPKLI-AAASEGGSNVFKVH-----YFNRDAYL 293

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   + L+AA  E++F  A  +R        H  EFT L+   A E +   + + +
Sbjct: 294 AQSPQLYKQMLIAADFERVFEIAPVFRAENSQTHRHMTEFTGLDLEMAFEEHYHEVVEVL 353

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
             +        Q+ F+ +          E                        +      
Sbjct: 354 EGLFVYIFAGLQERFAKEIAIVRAQYPVEEF-------------KVPKDGKVLRLTFKQG 400

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
               ++AG  V   +  S    R L   +    G +   ILD++P           P DP
Sbjct: 401 IAMLREAGHEVPDLEDLSTEMERTLGRLVAEKYGED-FYILDKFPLAVRPFYTMPDPEDP 459

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
           +++  ++ +    E+ +    + +      R          I  E   + ED++      
Sbjct: 460 QYSNSYDFFMRGEEILSGAQRVHNSQFLAERMSSL-----GIDPEAPGL-EDYVGAFKYG 513

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P  +G  +G +R+V L  G  NI      P  
Sbjct: 514 APPHAGGGIGLERVVFLWLGLGNIRRASAFPRD 546


>gi|47215025|emb|CAG01849.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 530

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ +    R+      F+EI +  +  +  +E    
Sbjct: 204 NQDTRLDNRVIDLRTTTSQAVFRLQSGVCQLFRDTLTNKGFVEIQTPKIISAA-SEGGAN 262

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 263 VFTVSYFKTSA-----YLAQSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTEFVG 317

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + D                 +   V         + T  +   +   
Sbjct: 318 LDIEMAFNYHYHEVIDS---------------ITDTMVQIFKGLRDNFQTEIQTVNKQFP 362

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            +    L+   + +        ++AG+ +  ++  S    ++L   ++     +   +LD
Sbjct: 363 SEPFKFLEPTLRLEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYVLD 421

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+++  ++++    E+ +    + D      R         +I
Sbjct: 422 KYPLAVRPFYTMPDPNNPKYSNSYDMFMRGEEILSGAQRVHDAQLLTER-----AMHHQI 476

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P   G  +G +R+ ML  G +N+ +    P  
Sbjct: 477 DLEKI---KAYIDSFRFGAPPHGGGGIGLERVCMLYLGLHNVRQTSMFPRD 524


>gi|126326269|ref|XP_001370366.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 499

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 173 NQDTRLDNRVIDLRTSTSQAVFRLQSGICHLFRETLIHKGFVEIQTPKIISAA-SEGGAN 231

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 232 VFTVSYFKSNA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 286

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + D +           Q+ F  +    N     E     E   R   
Sbjct: 287 LDIEMAFNYHYHEVIDEIADTLVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR--- 343

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   ILD
Sbjct: 344 ------------LEYREALALLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 390

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R          I
Sbjct: 391 KYPLAVRPFYTMPDPRNPKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGI 445

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 446 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRD 493


>gi|256846712|ref|ZP_05552168.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256717932|gb|EEU31489.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 461

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F EN F+ + +  +  S       +  F    +
Sbjct: 120 AHLRARTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEM--FRVTTL 177

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             + + K            +     L  S +    +   A    ++ F   +R       
Sbjct: 178 DMNKLPKKENGEIDFTKDFFGKSTNLTVSGQL-NVETFCAAFRNVYTFGPTFRAEYSNTA 236

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+    +++   +                F+      + 
Sbjct: 237 RHASEFWMVEPEIAFGDLSANMELAEAMVKFVIKYVMDTCPE----EMEFFNSFIEKGLF 292

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D G                  +++G +      W           +     
Sbjct: 293 DKLNNVLNNDFGRVTYTE-------AIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYF 345

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +  +  +L A  I       +  D  E   +    
Sbjct: 346 KKPV-FVTDYPKEIKAFYMKLNEDNKTVRAMDLLAPGIGEIIGGSQREDSFELLTK---- 400

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K+   NE     E +L          SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 401 -RMKELGLNEEDY--EFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRT 455


>gi|289803678|ref|ZP_06534307.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 128

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 1/125 (0%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  RF
Sbjct: 4   EAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRF 63

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  P 
Sbjct: 64  LDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPA 123

Query: 348 SQSNQ 352
            +  +
Sbjct: 124 MRPVK 128


>gi|325274571|ref|ZP_08140629.1| aspartyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324100298|gb|EGB98086.1| aspartyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 590

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 78/446 (17%), Positives = 129/446 (28%), Gaps = 115/446 (25%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I SS+R +  EN F+++++  L   +P     ++ 
Sbjct: 121 ETRLRYRFIDLRRPEMADKLRLRSRITSSIRRFLDENGFLDVETPILTRATPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE---- 116
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPE    
Sbjct: 181 PSRTHAGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 234

Query: 117 ----------------------------------FTMLEWYRAHESYEQLMKDCMNIIRC 142
                                             F  + +  A   Y     D  N +  
Sbjct: 235 DIETSFLDENEIMGLTESMIRKLFKEVLDLEFGEFPHMTFEEAMRRYGSDKPDLRNPLEL 294

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYIT-------------VAEAFARYANIDLGTTLDNP 189
                  K   F+            +T               + + ++  I     L   
Sbjct: 295 VDVADQLKDVDFKVFAGPANDPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYI 354

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--------------------------- 222
              +R       Q   ++   +   + I  R+                            
Sbjct: 355 KVNERAKGVEGLQSPIVKNIPEANLNTILDRVGAVDGDIVFFGADKFKVVSEALGALRIR 414

Query: 223 -IEKIEPNLGINCCTILDRYPAPE-----SALANIYPADPRFTKRFELYAC--------N 268
                E          +  +P  E     S  A  +P         EL A          
Sbjct: 415 LGHDFELLTCEWAPMWVVDFPMFEENEDGSFTALHHPFTAPKCTPQELEANPATALSRAY 474

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAM 324
             + N   EL     + HR E +    + +  E    +E F   L  L    P   G+A 
Sbjct: 475 DMVLNG-TELGGGSIRIHRKEMQQAVFRLLGIEAEEQEEKFGFLLDALKFGAPPHGGLAF 533

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQS 350
           G DRLVML+TGA +I EVI  P +QS
Sbjct: 534 GLDRLVMLMTGAQSIREVIAFPKTQS 559


>gi|317153560|ref|YP_004121608.1| asparaginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943811|gb|ADU62862.1| asparaginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 455

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 109/349 (31%), Gaps = 34/349 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRA 61
            H R R          R+ +  ++ ++F +  F  I +  +  S      E    T +  
Sbjct: 121 AHLRPRTNKYGAMFRIRSELAQAIHKFFADKGFFYIHTPIITGSDCEGAGEMFRVTSLEP 180

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
            STE   +D   KP  L  S + S +    +    ++ F   +R        H  EF M+
Sbjct: 181 GSTESADKDFFGKPAQLTVSGQLSAEMFALS-LGDVYTFGPTFRAENSNTPRHVAEFWMI 239

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A       M     +I+         I      + + F++       +      NI
Sbjct: 240 EPEMAFADLADNMDLGEEMIKYLV----THILDNCPDDVDLFAKWVD---KDLMPTLENI 292

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                   P      +L    ++    V       D+ +       E          +  
Sbjct: 293 LKEPFKRLPYTEAIDILKNAKKEFEYPVEWGM---DLQTEHERFLCEEQ--FKKPVYVHD 347

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP            D R     +     I       EL+   ++  R +  +   +++  
Sbjct: 348 YPKVIKPFYMRLNDDGRTVAAMDCLVPRI------GELIGGSQREERLDMLLARMQEMRL 401

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          +G  MGF+R++MLVTG  NI +V+  P +
Sbjct: 402 HEEDY-WWYLDSRRFGTAPHAGFGMGFERMLMLVTGVANIRDVMPFPRT 449


>gi|295398908|ref|ZP_06808890.1| asparaginyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312110485|ref|YP_003988801.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978374|gb|EFG53970.1| asparaginyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311215586|gb|ADP74190.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 430

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/351 (17%), Positives = 106/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN +  +  E+F +  F+++D   L   +P         
Sbjct: 114 MDHRHLWLRSR--RQHAIMKIRNEVIRATYEFFNDRGFVKVDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFDEDAYLSQSGQLYMEAAAMA-LGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  +      +    +   +                      +   +    D
Sbjct: 224 PEMAFYEFEDNLTLQEEYVSHIVQSVLENC--------------------QLELKTLGRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       Q    +   D  W D F       I  +   +    +  Y
Sbjct: 264 TTKLELVKPPFPRITYDEAIQLLHDKGFDDIQWGDDFGAPHETAIAES--FDKPVFITHY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           PA          P  P      +L A          E++       R       KK+I  
Sbjct: 322 PAALKPFYMQPDPDRPDVVLCADLIAP-----EGYGEIIGGS---ERIHDYELLKKRIEE 373

Query: 301 ETYPID--EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P+D  + +L          SG  +G +R V  + G +++ E I  P  
Sbjct: 374 HHLPLDAYKWYLELRQYGSVPHSGFGLGLERTVAWICGVDHVRETIPFPRL 424


>gi|294784425|ref|ZP_06749716.1| asparagine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294487997|gb|EFG35352.1| asparagine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 461

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F EN F+ + +  +  S       +  F    +
Sbjct: 120 AHLRARTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEM--FRVTTL 177

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             + + K            +     L  S +    +   A    ++ F   +R       
Sbjct: 178 DMNKLPKKENGEIDFTKDFFGKSTNLTVSGQL-NVETFCAAFRNVYTFGPTFRAEYSNTA 236

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+    +++   +                F+      + 
Sbjct: 237 RHASEFWMVEPEIAFADLSANMELAEAMVKFVIKYVMDTCPE----EMEFFNSFIEKGLF 292

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D G                  +++G +      W           +     
Sbjct: 293 DKLNNVLNNDFGRVTYTE-------AIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYF 345

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +  +  +L A  I       +  D  E        
Sbjct: 346 KKPV-FVTDYPKEIKAFYMKLNEDGKTVRAMDLLAPGIGEIIGGSQREDSYEIL-----L 399

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K+   ++     E +L          SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 400 NRMKELGLDKESY--EFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRT 455


>gi|313898712|ref|ZP_07832247.1| asparagine--tRNA ligase [Clostridium sp. HGF2]
 gi|312956596|gb|EFR38229.1| asparagine--tRNA ligase [Clostridium sp. HGF2]
          Length = 460

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/348 (15%), Positives = 105/348 (30%), Gaps = 35/348 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ E+F +  F+ + +  +  +       +   +T   
Sbjct: 129 AHLRPRANSFYAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITGNDGEGAGEMFKATTRDD 188

Query: 68  I---QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWY 123
               QD   K  +L  + +    +  A     ++ F  A+R        H  EF M+E  
Sbjct: 189 ADYEQDFFGKEAFLTVTGQLHV-EAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPE 247

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A    E  M    ++++   +                F+     +  E   +  N D  
Sbjct: 248 IAFADLEDDMNLIEDMVKYCIDYV----LENAPEEMKFFNTMIDKSCIERITKVRNSDFK 303

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                              QA ++  +   W    +      I   +       L  YP 
Sbjct: 304 RMTYTE-------AIDLLLQADVKFDNKVEWGMDLNSEHERYICEKIVDGPV-FLTDYPK 355

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI---YN 300
              A       D +     +L    +       +  +  +         + K       +
Sbjct: 356 EIKAFYMRVNDDGKTVAACDLLVPGVGELVGGSQREERYDVLE-----ARMKDMGMTTDS 410

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + +D           + +G  +GFDRL+M +TG  NI +V   P +
Sbjct: 411 LQWYMDLR----RYGGCKHAGFGLGFDRLLMYLTGMQNIRDVEPFPRT 454


>gi|302816976|ref|XP_002990165.1| hypothetical protein SELMODRAFT_428663 [Selaginella moellendorffii]
 gi|300142020|gb|EFJ08725.1| hypothetical protein SELMODRAFT_428663 [Selaginella moellendorffii]
          Length = 480

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/362 (16%), Positives = 123/362 (33%), Gaps = 56/362 (15%)

Query: 11  NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           +++  YR R                R    + +R Y   +   E+++  L+         
Sbjct: 155 DQEERYRNRVLDLIVNPDIKSVFAARTEAVNYIRTYMETSGVTEVNTGVLEQRSV----A 210

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
             F T     + +   + L+ S +   + L+ +    ++     +RN E    H PEFT 
Sbjct: 211 NGFKTH---HNQLNLDMVLRVSSDQLLQ-LIVSNFFGVYEIGKQFRNEEMSRTHNPEFTT 266

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------CNPFSEPEYITVA 171
            E Y+A+  Y+ LM+    ++             + + +         +       + V 
Sbjct: 267 CEMYKAYADYKDLMEMTEKLLSGLVMKITGGYKVYYHSDGYDSPPVVIDFTPPFRRVEVV 326

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +       +     L +        L       G+      + +++ S +    +E    
Sbjct: 327 KGLEEALGLKFPEDLASEQAN--EFLRETCSSKGVSCPPPLSTANLLSSLAGHFLEATSV 384

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
               T +  YP   +  A  + + P   + F+L+           +  DP E +      
Sbjct: 385 S--PTFIVDYPKRSTPFAKTHSSTPVLAEHFKLFVSK-------SQCRDPAEAQE----- 430

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                   +E + + E        +P  SG A G DRLVML+T + +I EV+  P  +  
Sbjct: 431 -------NSELHTLLE------YGLPPCSGWACGIDRLVMLLTDSVDIKEVVLYPALKPA 477

Query: 352 QE 353
           ++
Sbjct: 478 ED 479


>gi|291458160|ref|ZP_06597550.1| asparagine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291419243|gb|EFE92962.1| asparagine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 520

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 99/356 (27%), Gaps = 44/356 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++I  ++  +F E  F+ + +  +  S       +  F    + 
Sbjct: 181 HLRPRTNTLQAVFRIRSLIAFAIHRFFQERGFVYVHTPIITASDAEGAGEM--FQVTTLD 238

Query: 69  QDHIRK---------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            D + +           +     L  S +    +  A     I+ F   +R        H
Sbjct: 239 LDQLPRTEEGVDYGADFFGKKTSLTVSGQL-NGESFAQAFRNIYTFGPTFRAENSNTQRH 297

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++        +            +      + E 
Sbjct: 298 AAEFWMIEPEMAFAELSDIMDTAEDMLKFIIRHVLTEAPE----EMEFLNSFVDKGLLER 353

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                + D G                  ++      +  +W           +   +   
Sbjct: 354 MRCILDSDFGRISYTE-------AVEILEKHNADFEYKLSWGADLQTEHERYLTEKI-FQ 405

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D R     +     I E+        D      R E+  
Sbjct: 406 RPVFVTDYPKEIKAFYMKQNPDGRTVAAVDCLVPGIGEIIGGSQREEDYDRLLSRMEEL- 464

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +  E Y    D         +  G  +GF+R VM +TG  NI +V+  P +
Sbjct: 465 ----GMDIEAYRFYLDLRRF--GTTRHGGFGLGFERAVMYLTGMQNIRDVLPFPRT 514


>gi|261406095|ref|YP_003242336.1| asparaginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261282558|gb|ACX64529.1| asparaginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 431

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/350 (17%), Positives = 113/350 (32%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++R  ++ R  I  +++EYF  N F  +D   L  +    T      
Sbjct: 116 MDHRHLWLRT--QKQRAIMVIRAEIIRAVQEYFDTNGFTLVDPPILTPTSAEGT------ 167

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T L    +  +  YL  S +   +    A   K++ F   +R  +     H  EF M+E 
Sbjct: 168 TNLFHTKYFDEDAYLTQSGQLYMEAAAMA-LGKVYSFGPTFRAEKSKTRRHLIEFWMIEP 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E+ ++     I    +   +             S+ E I              
Sbjct: 227 EMAFTDHEESLQVQEQFISHVVQSVVKNCRQELETIGRDISKLEAI-------------- 272

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                    P   + Y +A +       D  W + F       I      +    +  YP
Sbjct: 273 -------QAPFPRITYDEAIEFLHTQDFDIPWGEDFGAPHETAIAEKY--DKPVFITHYP 323

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           A   +      P  P      ++ A     E+      + DP     RF++        +
Sbjct: 324 AGIKAFYMKPDPNCPEVVLCADMIAPEGYGEIIGGSQRIDDPQLLEERFKE--------H 375

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +    + ++          SG  +G +R V  + G +++ E I  P +
Sbjct: 376 DLSMETYQWYMDLRKYGTVPHSGFGLGLERTVAWICGLDHVRETIPFPRT 425


>gi|332031478|gb|EGI70962.1| Aspartyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 542

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 118/351 (33%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+      F+EI +  +  +  +E    
Sbjct: 216 NQDTRLDNRVLDLRTPANQAIFKVEAGVCKLFRDILTRKGFVEIHTPKIISAA-SEGGAN 274

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  +AA  +K+F     +R  +     H  EF  
Sbjct: 275 VFTVSYFKGNA-----YLAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 329

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   + D +  +        +  ++   +  +                   
Sbjct: 330 LDLEMAFKYHYHEVVDTIGQMFTELFKELRDNYADDIMAVSQQYP--------------- 374

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+   + +         +AG+ +  +D  S    ++L + I+     +   ILD
Sbjct: 375 VEPFKFLEPALKLEYPQAIELLAEAGVTLGEEDDLSTPDEKLLGKLIKNKYDTD-FYILD 433

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R      +   I
Sbjct: 434 KYPLAVRPFYTMPDPNNPKVSNSYDMFMRGEEIISGAQRIHDPDFLTER-----AKHHGI 488

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E       ++       P  +G  +G +R+VML  G +NI +V   P  
Sbjct: 489 DIEKI---RSYIDAFRYGCPPHAGGGIGMERVVMLYLGLDNIRKVSMFPRD 536


>gi|189425785|ref|YP_001952962.1| asparaginyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189422044|gb|ACD96442.1| asparaginyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 463

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/360 (14%), Positives = 104/360 (28%), Gaps = 49/360 (13%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++ ++F E  F+ + +  +  S       +  F    +
Sbjct: 122 AHLRPRSNTFGAVFRLRSKLAQAIHQFFSERNFLYVHTPIITASDCEGAGEL--FRVTTL 179

Query: 68  IQDH----------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +             +  +     L  S +   +    A    I+ F   +R       
Sbjct: 180 PPNGAPRNEGGSIDFGQDFFGQKTGLTVSGQLEGELFAQA-FGNIYTFGPTFRAENSNTA 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A              +R     A ++               E +   
Sbjct: 239 RHASEFWMIEPEMAFSDLADDADLAEEFVRYLCSFALRECA-------------EDMAFF 285

Query: 172 EAFARYANIDLGTTLDNPDQP--DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           +       I     +   +    D        Q+A +       W           +   
Sbjct: 286 DQHIEKGLIQRVRAVAEANFARMDYGDAITHLQKAPVSFNFPVEWGLDLQTEHERYLTEQ 345

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
           +      +L  YP    A       D R     +L    +       E++   ++  R +
Sbjct: 346 VVGGPVFVL-NYPKDIKAFYMRQNNDGRTVAAMDLLVPKV------GEIIGGSQREERLD 398

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              Q   ++     P+   +L          +G  +GF+RL+M ++G  NI +VI  P +
Sbjct: 399 LLEQRIDELEIPKEPL-WWYLDSRRWGSTPHAGFGLGFERLIMYLSGMENIRDVIPFPRT 457


>gi|332796317|ref|YP_004457817.1| aspartyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694052|gb|AEE93519.1| aspartyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 430

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/335 (19%), Positives = 110/335 (32%), Gaps = 43/335 (12%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
             +  ++    + REY    +F+EI +   +  +      +           +  K  +L
Sbjct: 133 AVIKIQSEAIRAFREYLYSQKFVEIFTPKIIATATEGGAQLFPVI-------YFGKEAFL 185

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   K+LLA   E++F  A AWR  E     H  EF   +   A   Y  +M    
Sbjct: 186 AQSPQLY-KELLAGTIERVFEVAPAWRAEESDTPYHLSEFLSADIEVAFADYNDIMNIVE 244

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           N +                               +   +  N  L        +      
Sbjct: 245 NTLDFMVNRVRSNC--------------------QKELKILNHTLPEIKKPIKRITYSEA 284

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
               Q AG+ +   D       RIL +K+  +L           P            +P 
Sbjct: 285 IEILQSAGVNIKFGDDIGTPEQRILHQKLNEDLYFIIDWPSTARP----FYTRRKSNNPE 340

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
            ++ F+L    +E+ +          +R   E+E++ +    N      E FL      M
Sbjct: 341 LSESFDLIYRWVEIASGSSRNY----KREVLEEELKTR--GLNIASF--EFFLKWFDYGM 392

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           P  +G+ +G  RL+ML TG  N+ E+   P  +  
Sbjct: 393 PPHAGVGIGVQRLMMLFTGLQNVKEISLFPRDKKR 427


>gi|167756625|ref|ZP_02428752.1| hypothetical protein CLORAM_02162 [Clostridium ramosum DSM 1402]
 gi|237733914|ref|ZP_04564395.1| asparaginyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|167702800|gb|EDS17379.1| hypothetical protein CLORAM_02162 [Clostridium ramosum DSM 1402]
 gi|229382995|gb|EEO33086.1| asparaginyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 476

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 102/344 (29%), Gaps = 29/344 (8%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETH----IRAFSTE 65
           H R R          R+++  ++ E+F    F+ + +  +  + G               
Sbjct: 146 HLRPRANTFYAIFRLRSVLSMAIHEFFQSQGFVYVHTPIITGNDGEGAGEMFRATTIDGT 205

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYR 124
               D   K  +L  + +    +  A     ++ F  A+R        H  EF M+E   
Sbjct: 206 NFEDDFFEKEAFLTVTGQLHV-EAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEI 264

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A    E  M    ++++   +       +              +   +   R   +    
Sbjct: 265 AFADLEDDMDLIEDMVKYCIDYVLDNAPAEMEF-------FASMIDKDCINRITKVKNSD 317

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                      +L    ++A ++  +  +W    +      I   +       L  YP  
Sbjct: 318 FKRMTYTEAIEIL----EKADVKFKNKVSWGMDLNSEHERYICEQVVKGPV-FLTDYPKE 372

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
             A       D +     +L    I       +  +  +   R   E    K      + 
Sbjct: 373 IKAFYMRLNDDNKTVAACDLLVPGIGELVGGSQREERYDVLERIMDEKGMSK--DGLQWY 430

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +D           + +G  +GFDR +M +TG  NI +V   P +
Sbjct: 431 MDLR----RYGGCKHAGFGLGFDRFLMYLTGMQNIRDVEPFPRT 470


>gi|160878256|ref|YP_001557224.1| asparaginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160426922|gb|ABX40485.1| asparaginyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 472

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 108/359 (30%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F E  F+ + +  +  S       +  F    +
Sbjct: 131 THLRPRTNTFQAVFRVRSLVAYAIHKFFQERDFVYVHTPLITGSDCEGAGEM--FQVTTL 188

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +             +  +     L  S +    +  A   + I+ F   +R       
Sbjct: 189 DLNNIPKTKEGQVDFDQDFFNKPTNLTVSGQL-NGETYAMAFKNIYTFGPTFRAENSNTT 247

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M    ++++   +                F+      + 
Sbjct: 248 RHAAEFWMIEPEIAFADLKDDMILAESMLKYVIKYV----LEHAPEEMEFFNSFVDQGLL 303

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E     AN D G                  ++   +  +  +W           +   + 
Sbjct: 304 ERLQHVANSDFGHVTYTE-------AIEILEKNNDKFEYKVSWGCDLQTEHERFLTEQIF 356

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    I       +  D  +     +  
Sbjct: 357 KKPV-FVTDYPKEIKAFYMKLNEDNKTVAAMDLLVPGIGEIIGGSQREDDYD-----KLV 410

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K+   NE    D DF   L      + +G  +GF+R VM +TG  NI +VI  P +
Sbjct: 411 AKMKESDLNEE---DYDFYLDLRKYGSARHAGFGLGFERCVMYLTGMGNIRDVIPFPRT 466


>gi|282898480|ref|ZP_06306470.1| Asparaginyl-tRNA synthetase, class IIb [Raphidiopsis brookii D9]
 gi|281196646|gb|EFA71552.1| Asparaginyl-tRNA synthetase, class IIb [Raphidiopsis brookii D9]
          Length = 463

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 114/358 (31%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN   +++ ++F +  F+ + +  L  S       +  FS   +
Sbjct: 122 AHLRSRTNSFGAVFRVRNACATAIHQFFQQRGFMWVHTPILTASDCEGAGEL--FSVTSL 179

Query: 68  ---------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGC 111
                           QD   KP YL  S +    +++A     ++ F   +R       
Sbjct: 180 NLKDIPRKENQEVDYSQDFFGKPTYLTVSGQLEA-EIMAMAFTNVYTFGPTFRAENSHTS 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E  M    + ++                +   F+E    TV 
Sbjct: 239 RHLAEFWMVEPEMAFCDLEGDMNLAEDFLKHIFRYV----MENCEQDMEFFNERIDNTVL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N       +  ++          ++A ++  +   W           +   L 
Sbjct: 295 ETAENIVN-------NQFERLTYTDAIQMLEKAEVKFDYPVEWGLDLQSEHERYLAEQLF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                I+  YPA   A       D +  +  ++      L     E++   ++  R +  
Sbjct: 348 KKPV-IVTDYPAQIKAFYMKLNNDEKTVRAMDI------LAPKIGEIIGGSQREERLDIL 400

Query: 292 MQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +       +   +   +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 401 ERRVLAQGMKPEDL-WWYLDLRRYGTVPHAGFGLGFERLVQFMTGMGNIRDVIPFPRT 457


>gi|315651995|ref|ZP_07904997.1| asparagine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485824|gb|EFU76204.1| asparagine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 463

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 104/360 (28%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++I  ++ ++F E  F+ + +  +  S       +  F    +
Sbjct: 122 THLRPRTNTFQAVFRVRSLIAYAIHKFFQERDFVYVHTPIITGSDAEGAGEM--FRVTTL 179

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
                            D   K   L  S +    +  A     I+ F   +R       
Sbjct: 180 EPRDPVLNKDGSVDFSKDFFGKETNLTVSGQL-NGETFAMAFRNIYTFGPTFRAENSNTT 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M    ++++                    F++     + 
Sbjct: 239 RHAAEFWMIEPEFAFGDLNDNMDLAESMLKYIINYV----LENAAPEMEFFNQFVDKGLL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E     AN + G                  ++      +  +W           +   + 
Sbjct: 295 ERLHHVANSEFGRVTYTE-------AIDILEKNNDNFEYKVSWGCDLQTEHERFLTEQVF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                 +  YP    A       D +     +     I E+        D  +   R E+
Sbjct: 348 KKP-IFVTDYPKEIKAFYMKENDDKKTVAAMDCLVPGIGEIIGGSQREDDYNKLLKRIEE 406

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              + +         D DF   L      + +G  +GF+R VM +TG +NI +V+  P +
Sbjct: 407 LGMKSE---------DYDFYLDLRKYGSTRHAGFGLGFERCVMYLTGMSNIRDVLPFPRT 457


>gi|15678254|ref|NP_275369.1| aspartyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3122882|sp|O26328|SYD_METTH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2621273|gb|AAB84732.1| aspartyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 437

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 122/352 (34%), Gaps = 57/352 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIR 60
           D     R               ++ +  S+R +  E  F+EI++  L  S   G      
Sbjct: 123 DTRLDARFLDLRKPSVSAIFKIKSRMLHSVRVFLEEQGFLEINTPKLVASATEGG----- 177

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTM 119
              TEL    +  +  +L  SP+   + +++ G ++++  A  +R  E     H  E   
Sbjct: 178 ---TELFPITYFEREAFLGQSPQLYKQIMMSTGLDRVYEIAPIFRAEEHDTLRHLNEVIS 234

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++   +   +E +MK   N++    E  N+                              
Sbjct: 235 IDIEASFVDHEDVMKILENLVVRVIEDVNEHCTDALET---------------------- 272

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
             LG TL+ P+ P   L Y +A +            +   R   + +   +  +    + 
Sbjct: 273 --LGRTLEVPETPFERLEYDEAVEMVNSKGVPMKHGEDLPRAAEKALGEIM--DGYYFIT 328

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
            +P             DP  +  F+L   ++E+ +    +        + +++      +
Sbjct: 329 SWPTAIKPFYVMPDEDDPERSHAFDLMYRDLEISSGAMRVHQHDLLVEKIKRQ-----GL 383

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +++   E +L+     MP  +G  +G +R  M +TG  NI E +  P  +
Sbjct: 384 NPDSF---ESYLSAFEYGMPPHAGWGLGAERFNMTLTGLKNIRETVLFPRDR 432


>gi|309774843|ref|ZP_07669864.1| asparagine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308917401|gb|EFP63120.1| asparagine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 460

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 108/351 (30%), Gaps = 41/351 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ E+F +  F+ + +  +  +       +   +T   
Sbjct: 129 AHLRPRANSFYAIFRLRSVLSMAIHEFFQDQGFVYVHTPIITGNDGEGAGEMFKATTRED 188

Query: 68  I---QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWY 123
               QD   K  +L  + +    +  A     ++ F  A+R        H  EF M+E  
Sbjct: 189 ADYEQDFFGKEAFLTVTGQLHV-EAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPE 247

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A    E  M    ++++   +                F+     +  E   +  N D  
Sbjct: 248 IAFADLEDDMNLIEDMVKYCIDYV----LENAPEEMKFFNTMIDKSCIERITKVRNSDFK 303

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                              QA ++  +   W    +      I   +       L  YP 
Sbjct: 304 RMTYTE-------AIELLLQADVKFDNKVEWGMDLNSEHERYICEKIVDGPV-FLTDYPK 355

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACD---ELLDPIEQRHRFEKEMQEKKKI-- 298
              A       D +     +L    +          E  D +EQR         K+    
Sbjct: 356 DIKAFYMRVNDDGKTVAACDLLVPGVGELVGGSQREERYDVLEQR--------MKEMGMT 407

Query: 299 -YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +  + +D           + +G  +GFDRL+M +TG  NI +V   P +
Sbjct: 408 TDSLQWYMDLR----RYGGCKHAGFGLGFDRLLMYLTGMQNIRDVEPFPRT 454


>gi|34763750|ref|ZP_00144669.1| Asparaginyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27886486|gb|EAA23742.1| Asparaginyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 461

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 108/359 (30%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F EN F+ + +  +  S       +  F    +
Sbjct: 120 AHLRARTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEM--FRVTTL 177

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             + + K            +     L  S +    +   A    ++ F   +R       
Sbjct: 178 DMNKLPKKENGEIDFTKDFFGKSTNLTVSGQL-NVETFCAAFRNVYTFGPTFRAEYSNTA 236

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+    +++   +                F+      + 
Sbjct: 237 RHASEFWMVEPEIAFGDLSANMELAEAMVKFVIKYVMDTCPE----EMEFFNSFIEKGLF 292

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D G                  +++G +      W           +     
Sbjct: 293 DKLNNVLNNDFGRVTYTE-------AIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYF 345

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                 +  YP    A       D +  +  +L A  I E+              +R E+
Sbjct: 346 KKPV-FVTDYPKEIKAFYMKLNEDGKTVRAMDLLAPGIGEIIGGSQREDSYEILLNRMEE 404

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  +  E+Y   E +L          SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 405 L-----GLDKESY---EFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRT 455


>gi|323484764|ref|ZP_08090121.1| hypothetical protein HMPREF9474_01872 [Clostridium symbiosum
           WAL-14163]
 gi|323401870|gb|EGA94211.1| hypothetical protein HMPREF9474_01872 [Clostridium symbiosum
           WAL-14163]
          Length = 443

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 112/349 (32%), Gaps = 42/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +P   R+   R R        I  + RE+     F EI +  +         +    
Sbjct: 127 LDMRPLTLRNVRERAR--FKIEEGIARAFREFLQGEGFTEIHTPKIGARGAEGGAN---- 180

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
              +   D+  +P  L  SP+F  +  +    +++      +R  +     H  E+T L+
Sbjct: 181 ---VFKLDYFHRPAVLAQSPQFYKQM-MVGVFDRVMEIGPVFRAEKHNTKRHLNEYTGLD 236

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
           +   +      +               +  +  +                         +
Sbjct: 237 FEMGYIDDFTDIMAMETGFLQHMVSLLRTEYGQELGLLRA-------------------E 277

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           L    + P         L A++ G  + +          ++    +   G +    +  Y
Sbjct: 278 LPKVDEIPCIAFTQAKELAAEKYGTVIKNPYDLEPEEEHLIGRYFKEEYGAD-FVFVTHY 336

Query: 242 PAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P+ +     +    DPRFT+ F+L    +E+      + D  E   + E     K+ +  
Sbjct: 337 PSKKRPFYAMDDPEDPRFTRSFDLLFRGLEVTTGGQRIHDYRELLAKIE-----KRGMDT 391

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E     +D+L      MP   G+ +G +R+ M + G  N+ EV   P  
Sbjct: 392 EGM---DDYLNTFKYGMPPHGGLGIGLERMTMQLLGEENVREVSLFPRD 437


>gi|254302420|ref|ZP_04969778.1| asparagine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322612|gb|EDK87862.1| asparagine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 461

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F EN F+ + +  +  S       +  F    +
Sbjct: 120 AHLRPRTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEM--FRITTL 177

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +             K  +     L  S +    +   A    ++ F   +R       
Sbjct: 178 DLNKVPKKENGEVDFSKDFFGKSTNLTVSGQL-NVETFCAAFRNVYTFGPTFRAEYSNTA 236

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+    +++   +                F+      + 
Sbjct: 237 RHASEFWMIEPEIAFGDLGANMELAEAMVKYIIKYV----MDNCPEEMEFFNSFIEKGLF 292

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D G                  +++G +      W           +     
Sbjct: 293 DKLNNVLNNDFGRVTYTE-------AIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYF 345

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +  +  +L A  I       +  D  E   +    
Sbjct: 346 KKPV-FVTDYPKDIKAFYMKLNEDNKTVRAMDLLAPGIGEIIGGSQREDNYELLTK---- 400

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K+   NE     E +L          SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 401 -RMKELGLNEEDY--EFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRT 455


>gi|167035198|ref|YP_001670429.1| aspartyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189082136|sp|B0KTJ6|SYD_PSEPG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166861686|gb|ABZ00094.1| aspartyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 591

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 78/446 (17%), Positives = 130/446 (29%), Gaps = 115/446 (25%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I SS+R +  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMADKLRLRSRITSSIRRFLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE---- 116
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPE    
Sbjct: 182 PSRTHAGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 117 ----------------------------------FTMLEWYRAHESYEQLMKDCMNIIRC 142
                                             F  + +  A   Y     D  N +  
Sbjct: 236 DIETSFLDESEIMGLTESMIRKLFKEVLDLEFGEFPHMTFEEAMRRYGSDKPDLRNPLEL 295

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYIT-------------VAEAFARYANIDLGTTLDNP 189
                  K   F+            +T               + + ++  I     L   
Sbjct: 296 VDVADQLKDVDFKVFAGPANDPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYI 355

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--------------------------- 222
              +R       Q   ++   +   ++I  R+                            
Sbjct: 356 KVNERAKGVEGLQSPIVKNIPEANLNNILDRVGAVDGDIVFFGADKFKVVSEALGALRIR 415

Query: 223 -IEKIEPNLGINCCTILDRYPAPE-----SALANIYPADPRFTKRFELYAC--------N 268
                E          +  +P  E     S  A  +P         EL A          
Sbjct: 416 LGHDFELLTCEWAPMWVVDFPMFEENEDGSFTALHHPFTAPKCTPEELEANPATALSRAY 475

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAM 324
             + N   EL     + HR E +    + +  E    +E F   L  L    P   G+A 
Sbjct: 476 DMVLNG-TELGGGSIRIHRKEMQQAVFRLLGIEAEEQEEKFGFLLDALKFGAPPHGGLAF 534

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQS 350
           G DRLVML+TGA +I EVI  P +QS
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQS 560


>gi|139438543|ref|ZP_01772059.1| Hypothetical protein COLAER_01057 [Collinsella aerofaciens ATCC
           25986]
 gi|133776082|gb|EBA39902.1| Hypothetical protein COLAER_01057 [Collinsella aerofaciens ATCC
           25986]
          Length = 471

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 117/358 (32%), Gaps = 40/358 (11%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIR 60
             H R R          R++  +++  +F E  F+ +++  +  S      E    T + 
Sbjct: 126 QQHLRPRTNLFRAVFRIRSVAAAAIHRFFQEQGFVYVNTPIITTSDCEGAGEMFRVTTLD 185

Query: 61  AFSTELIIQDHIR--KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
             +  L     +   +  +     L  S + + +    A    ++ F   +R        
Sbjct: 186 PKNPPLTESGEVDWSQDFFGKHASLTVSGQLNAENFAMA-FGDVYTFGPTFRAENSNTTR 244

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M +   +++       + + +      N  ++     + E
Sbjct: 245 HAAEFWMIEPEMAFADLNDYMDNAEAMLKY----VLKDVMATCPDELNMLNKFVDKGLIE 300

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                AN D           +   +  QA  AG +  +  +W           +      
Sbjct: 301 RLDHVANSDFARVTY----TEAVEILEQAVAAGHQFDYPVSWGIDLQTEHERFLTEEH-F 355

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-E 291
              T +  YPA   A       D +     +     I       E++   ++  R +  E
Sbjct: 356 KRPTFVTDYPAEIKAFYMRMNDDGKTVAAADCLVPGI------GEIIGGSQREERLDLLE 409

Query: 292 MQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K    N      + +L        + +G  +GF+RLVM +TG  NI +V+  P +
Sbjct: 410 ARIKDLGMNPEQY--KYYLDLRRYGSCKHAGYGLGFERLVMYLTGVGNIRDVLPHPRT 465


>gi|161528379|ref|YP_001582205.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339680|gb|ABX12767.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 436

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 70/340 (20%), Positives = 127/340 (37%), Gaps = 52/340 (15%)

Query: 16  YRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQD 70
            RR+        R+++  S+R YF +  F+EI++  +  +   G           L    
Sbjct: 136 LRRKVLQHIFNTRSLVLKSIRSYFNDQNFVEINTPKMIATATEGGAA--------LFPIF 187

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +  K  +L  SP+   K+ L    EK+F  A  +R        H  E   ++   A   Y
Sbjct: 188 YYNKEAFLAQSPQLY-KEQLTMSFEKVFEIAPIFRAEPSRTNRHLAEAISIDLEEAFIDY 246

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             +M     II+ + +              NP +E     + E   +Y+  D        
Sbjct: 247 NDVMSRIEEIIKISIKTVTD------YAKDNPDAEFTIPEIPETIPQYSYDD-------- 292

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-APESAL 248
                  L  + Q+AG +      W D      ++KI    G+     +  +P AP+   
Sbjct: 293 -------LVDKMQKAGAKTE----WGDDLYPSNLKKI----GLEGFYFIKDWPLAPKPFY 337

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                A+P+ ++ F+L   ++EL +    +    E   R +      K +  + +     
Sbjct: 338 VKDSKANPKISESFDLMFGDLELSSGSTRIEKRNELAERMKN-----KGMNTDAFEY--H 390

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             A    +P  +G  +G +RL+M +TG  NI +V + P  
Sbjct: 391 LGAFDYGVPPHAGCGIGLERLIMALTGTENIRDVTFYPRD 430


>gi|323691833|ref|ZP_08106089.1| aspartate-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323504115|gb|EGB19921.1| aspartate-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 443

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 58/348 (16%), Positives = 114/348 (32%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +P   R+   R R        I  + RE+     F EI +  +  + G E     F 
Sbjct: 127 LDMRPLTLRNVRERAR--FKIEEGIARAFREFLQGEGFTEIHTPKI-GARGAEGGANVFK 183

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
                 D+  +P  L  SP+F  +  +    +++      +R  +     H  E+T L++
Sbjct: 184 -----LDYFHRPAVLAQSPQFYKQM-MVGVFDRVMEIGPVFRAEKHNTKRHLNEYTGLDF 237

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
              +      +               +  +  +                         +L
Sbjct: 238 EMGYIDDFTDIMAMETGFLQHMVSLLRTEYGQELGLLRA-------------------EL 278

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
               + P         L A++ G  + +          ++    +   G +    +  YP
Sbjct: 279 PKVDEIPCIAFTQAKELAAEKYGTVIKNPYDLEPEEEHLIGRYFKEEYGAD-FVFVTHYP 337

Query: 243 APESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           + +     +    DPRFT+ F+L    +E+      + D  E   + E     K+ +  E
Sbjct: 338 SKKRPFYAMDDPEDPRFTRSFDLLFRGLEVTTGGQRIHDYRELLAKIE-----KRGMDTE 392

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +D+L      MP   G+ +G +R+ M + G  N+ EV   P  
Sbjct: 393 GM---DDYLNTFKYGMPPHGGLGIGLERMTMQLLGEENVREVSLFPRD 437


>gi|104783076|ref|YP_609574.1| aspartyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123255376|sp|Q1I6E5|SYD_PSEE4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|95112063|emb|CAK16790.1| aspartyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 591

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 78/446 (17%), Positives = 130/446 (29%), Gaps = 115/446 (25%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I SS+R +  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMADKLRLRSRITSSIRRFLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE---- 116
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPE    
Sbjct: 182 PSRTHAGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 117 ----------------------------------FTMLEWYRAHESYEQLMKDCMNIIRC 142
                                             F  + +  A   Y     D  N +  
Sbjct: 236 DIETSFLDESEIMGLTESMIRKLFKEVLDLEFGEFPHMTFEEAMRRYGSDKPDLRNPLEL 295

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYIT-------------VAEAFARYANIDLGTTLDNP 189
                  K   F+            +T               + + ++  I     L   
Sbjct: 296 VDVADQLKDVDFKVFAGPANDPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYI 355

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--------------------------- 222
              +R       Q   ++   +   ++I  R+                            
Sbjct: 356 KVNERAKGVEGLQSPIVKNIPEANLNNILDRVGAVDGDIVFFGADKFKVVSEALGALRIR 415

Query: 223 -IEKIEPNLGINCCTILDRYPAPE-----SALANIYPADPRFTKRFELYAC--------N 268
                E          +  +P  E     S  A  +P         EL A          
Sbjct: 416 LGHDFELLTCEWAPMWVVDFPMFEENEDGSFTALHHPFTAPKCTPEELEANPATALSRAY 475

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAM 324
             + N   EL     + HR E +    + +  E    +E F   L  L    P   G+A 
Sbjct: 476 DMVLNG-TELGGGSIRIHRKEMQQAVFRLLGIEAAEQEEKFGFLLDALKFGAPPHGGLAF 534

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQS 350
           G DRLVML+TGA +I EVI  P +QS
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQS 560


>gi|331002360|ref|ZP_08325878.1| asparaginyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330410176|gb|EGG89610.1| asparaginyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 463

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 104/359 (28%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++I  ++ ++F E  F+ + +  +  S       +  F      
Sbjct: 123 HLRPRTNTFQAVFRVRSLIAYAIHKFFQERDFVYVHTPIITGSDAEGAGEM--FRVTTFD 180

Query: 69  Q---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                           D   K   L  S +    +  A     I+ F   +R        
Sbjct: 181 PANPVLNDDGSVDFSKDFFGKETNLTVSGQL-NGETFAMAFRNIYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +  M    ++++              ++    F++     + +
Sbjct: 240 HAAEFWMIEPEFAFGDLDDNMDLAESMLKYIINYV----LENASLEIEFFNQFVDKGLLD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                   D G                  ++      +  +W           +   +  
Sbjct: 296 RLKNVVESDFGRITYTE-------AIDILKKNNDNFEYKVSWGCDLQTEHERFLTEQVFK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        D  +   R E+ 
Sbjct: 349 KP-IFVTDYPKDIKAFYMKENDDKKTVAAMDCLVPGIGEIIGGSQREDDYNKLLSRIEEL 407

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +         P D DF   L      + +G  +GF+R VM +TG +NI +V+  P +
Sbjct: 408 GMK---------PEDYDFYLDLRKYGSTRHAGFGLGFERCVMYLTGMSNIRDVLPFPRT 457


>gi|237740975|ref|ZP_04571456.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229431019|gb|EEO41231.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 461

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 108/359 (30%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F EN F+ + +  +  S       +  F    +
Sbjct: 120 AHLRARTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEM--FRVTTL 177

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             + + K            +     L  S +    +   A    ++ F   +R       
Sbjct: 178 DMNKLPKKENGEIDFTKDFFGKSTNLTVSGQL-NVETFCAAFRNVYTFGPTFRAEYSNTA 236

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+    +++   +                F+      + 
Sbjct: 237 RHASEFWMIEPEIAFGDLGANMELAEAMVKSIIKYV----MDNCPEEMEFFNSFIEKGLF 292

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D G                  +++G +      W           +     
Sbjct: 293 DKLNNVLNNDFGRVTYTE-------AIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYF 345

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                 +  YP    A       D +  +  +L A  I E+              +R E+
Sbjct: 346 KKPV-FVTDYPKEIKAFYMKLNEDGKTVRAMDLLAPGIGEIIGGSQREDSYEILLNRMEE 404

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  +  E+Y   E +L          SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 405 L-----GLDKESY---EFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRT 455


>gi|213422536|ref|ZP_03355602.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 133

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 1/125 (0%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   T +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  RF
Sbjct: 9   EAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRF 68

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             ++  K    +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  P 
Sbjct: 69  LDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPA 128

Query: 348 SQSNQ 352
            +  +
Sbjct: 129 MRPVK 133


>gi|51245183|ref|YP_065067.1| asparaginyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|59798522|sp|Q6ANL4|SYN_DESPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|50876220|emb|CAG36060.1| probable asparaginyl-tRNA synthetase [Desulfotalea psychrophila
           LSv54]
          Length = 449

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/343 (16%), Positives = 97/343 (28%), Gaps = 30/343 (8%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+ +  ++  +F E  F ++ +  +  S       +   +     
Sbjct: 122 HLRPRTNAISAVARVRSRLSYAVHNFFQEKGFTQVHTPIITTSDCEGAGEMFQVAATGKD 181

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHE 127
                 P  L  S +   +    A    ++ F   +R        H  EF M+E   A  
Sbjct: 182 GHFFGAPAGLTVSGQLQAEVYATA-LGDVYTFGPTFRAENSNTSRHLAEFWMIEPEMAFC 240

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
             +  M+    +++       +   +    + N F +     + E        D      
Sbjct: 241 DLQGDMEVAEEMLKYVLADVLEHCVT----DMNLFDKFISKGIIERLQSVLAHDFARVTY 296

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                       Q   +G +      W           +   +      I+  YPA    
Sbjct: 297 TE-------AVDQLLASGQKFDFAVKWGIDLQSEHERYLTEQVYKRPL-IVTDYPAAIKP 348

Query: 248 LANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                  D +     ++    I EL               R E        +  E Y   
Sbjct: 349 FYMRMNEDGKTVAAMDILVPGIGELVGGSQREERYDLLAERMEA-----AGLDLEEYG-- 401

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +L          +G  +GF+RLV  VTG  NI EVI  P +
Sbjct: 402 -WYLDLRKYGTVPHAGFGLGFERLVQFVTGMANIREVIPFPRT 443


>gi|171186197|ref|YP_001795116.1| asparaginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935409|gb|ACB40670.1| asparaginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 431

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/347 (17%), Positives = 119/347 (34%), Gaps = 39/347 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    + +  L  R+ +  ++ +YF  + F E+ +     +   E     F 
Sbjct: 116 LDVRHLWLRSR--KMQAVLKIRHTVFEAIHQYFRRSGFYEVQTPMFITAAV-EGGATLFK 172

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
                 D+  +P+YL  S +F  + L+ +  EK++  A ++R        H  EF   E 
Sbjct: 173 V-----DYFGQPVYLTQSSQFYLEALIYS-LEKVYVIAPSFRAEPSRTRRHLTEFWHAEM 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    E   K    +I    E   Q+     ++        E          Y     
Sbjct: 227 EMAWAGMEDAAKVGEEVISYVVEKVLQERAEELSLLGRKTEPLERAKPPFYRVSY----- 281

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                              ++ G+ ++  D       R L       L  +   +L  +P
Sbjct: 282 ------------DEAVEILRKKGVSISWGDDIGADEERAL------TLEFDKPLVLYGFP 323

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
               A    +  +P   +    +   + L     E++   E+ +   + +++ K+     
Sbjct: 324 EKLKAFY--HRNNPDRPEVTLSFD--VLLPEGYGEVIGGGERIYDPVELVEKIKRFGLNP 379

Query: 303 YPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ++          +G  +G DRLVM +TGA++I +V+  P  
Sbjct: 380 EDY-QWYIDLRRYGSVPHAGFGLGVDRLVMWITGADHIRDVVPFPRD 425


>gi|325261859|ref|ZP_08128597.1| aspartate--tRNA ligase [Clostridium sp. D5]
 gi|324033313|gb|EGB94590.1| aspartate--tRNA ligase [Clostridium sp. D5]
          Length = 443

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 117/339 (34%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  I    R++  E  F EI +  L   S     ++          ++ 
Sbjct: 135 RNIRERAKFRIQEGIVRGFRDFLYEEGFTEIHTPKLGAKSAEGGANL-------FRLEYF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P  LQ SP+F  +  +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 188 HRPAILQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +               ++ ++ +                    R   I+L      P  
Sbjct: 247 DIMAMEAGFLQYTMKLLEREYAGE-------------------LRILGIELPKAEKIPAV 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +    +++ G  + +         +++ +  +   G +    +  YP+ +     +
Sbjct: 288 RFDDIKRKVSEKYGRGIKNPYDLEPEEEQLISQYAKEEWGAD-FVFVTHYPSRKRPFYAM 346

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               DP FT  F+L    +E+      + D  E + + E      + +  E     E +L
Sbjct: 347 DDPEDPTFTLSFDLLFRGMEITTGGQRIHDYHELKKKMEI-----RGMTEEGM---EQYL 398

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     MP   G+ +G +RL M + G +N+ E    P  
Sbjct: 399 SAFKHGMPPHGGLGIGLERLTMKILGEDNVREAALFPRD 437


>gi|17231150|ref|NP_487698.1| asparaginyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|20139875|sp|P58692|SYN_ANASP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|17132791|dbj|BAB75357.1| asparaginyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 463

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/356 (16%), Positives = 111/356 (31%), Gaps = 43/356 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF------ 62
           H R R          RN   +++ ++F E  F+ + +  +  S       + +       
Sbjct: 123 HLRSRTNSFGAVFRVRNACSAAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTSLDLK 182

Query: 63  ---STELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
               TE    D+      KP YL  S +    +++A     ++ F   +R        H 
Sbjct: 183 QIPRTENQGIDYSQDFFAKPTYLTVSGQLEA-EVMAMAFSNVYTFGPTFRAENSNTSRHL 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E  M      ++       +K                  T     
Sbjct: 242 AEFWMVEPEMAFCDLEGDMDLAEAFLKHIFNHVLEKCPEDMEFFNQRIDNTVLATAE--- 298

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                       +  ++          ++A ++  +  +W           +   L    
Sbjct: 299 --------NIINNQFERLTYTDAIKLLEKADVKFEYPVSWGLDLQSEHERYLAEQLFKKP 350

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YPA   A       D +  +          L     E++   ++  R   ++ E
Sbjct: 351 V-IVTDYPAQIKAFYMRLSDDEKTVRAM------DVLAPKIGEIIGGSQREERL--DVLE 401

Query: 295 KKKIYNETYPID-EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++ +     P D   +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 402 RRVLAQGMQPEDLWWYLDLRRYGTVPHAGFGLGFERLVQFITGMGNIRDVIPFPRT 457


>gi|149919126|ref|ZP_01907610.1| asparaginyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149820056|gb|EDM79477.1| asparaginyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 467

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/372 (16%), Positives = 105/372 (28%), Gaps = 46/372 (12%)

Query: 3   QIPSQPWW----NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +           H R R          R+ +  S+  +F E  F  I +  +  S 
Sbjct: 110 PLQKKRHGFEFLREQAHLRVRTNTFGAVFRVRSALAQSVHRFFGERGFYYIHTPIITASD 169

Query: 53  -------------PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
                        P  +            QD   KP +L  S +    +  A G   I+ 
Sbjct: 170 TEGAGEMFRVTTLPVGDPPRDDEGAVDDKQDFFAKPTFLTVSGQL-NGETFALGLSDIYT 228

Query: 100 FAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN 158
           F   +R        H  EF M+E   A    +   +   + ++       +        +
Sbjct: 229 FGPTFRAENSNTSRHASEFWMIEPEMAWHDLDDDCQLAEDFVKAML----KTALEDCAED 284

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
              F +     + E   + A  D                    +++G        W    
Sbjct: 285 LAFFDKRIDKGLIERLTKVAEADFARITYTE-------AVELLEKSGKSFEFPVEWGKNL 337

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
                  I   + +   T +  YP    A       D +     +L    I       EL
Sbjct: 338 QAEHERYITEEI-LGRPTFVVDYPKEIKAFYMRRNDDGKTVAAMDLLVPKI------GEL 390

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDED-FLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           +   ++  R +                D D +L          +G  +GF+RLVM  TG 
Sbjct: 391 IGGSQREERLDVLESIFAS-DPHLSVEDYDWYLDTRRFGTAPHAGFGLGFERLVMYATGM 449

Query: 337 NNINEVIWTPFS 348
            NI +VI  P +
Sbjct: 450 ENIRDVIPFPRT 461


>gi|257470486|ref|ZP_05634577.1| asparaginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317064694|ref|ZP_07929179.1| asparaginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313690370|gb|EFS27205.1| asparaginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 463

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 111/361 (30%), Gaps = 51/361 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++I  ++ ++F EN F+ + +  +  S       +  F    +
Sbjct: 122 AHLRPRTNTFSAVFRVRSVIAYAIHKFFQENGFVYVHTPIITGSDAEGAGEM--FRVTTL 179

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             + + K            +     L  S + S +   AA    I+ F   +R       
Sbjct: 180 DLNDLPKGEDGKVDSSKDFFGKETNLTVSGQLSGETYCAA-FRNIYTFGPTFRAEYSNTA 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E  M+    +++   +                F++     + 
Sbjct: 239 RHASEFWMIEPEIAFADLEANMELAEAMVKYIIKYV----LEQCPEEMEFFNQFIEKGLF 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D G                  +++G +  +   W           +     
Sbjct: 295 DKLNNVLNSDFGRLTYTE-------AIEILEKSGKKFDYPVKWGIDLQSEHERYLAEEYF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 L  YP    A       D +  +  +L A  I       +  D           
Sbjct: 348 KKPV-FLTDYPKDIKAFYMKLNEDGKTVRAMDLLAPGIGEIIGGSQREDN---------- 396

Query: 292 MQEKKKIYNETYPIDEDFLACL----TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++  +   NE     ED+   L          SG  +GF+R++M VTG  NI +VI  P 
Sbjct: 397 LEILEGRINELGMNTEDYGFYLDLRKYGSFPHSGYGLGFERMIMYVTGMTNIRDVIPFPR 456

Query: 348 S 348
           +
Sbjct: 457 T 457


>gi|253582830|ref|ZP_04860050.1| asparagine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251835406|gb|EES63947.1| asparagine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 463

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/360 (16%), Positives = 110/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++I  ++ ++F EN F+ + +  +  S       +  F    +
Sbjct: 122 AHLRPRTNTFSAVFRVRSVIAYAIHKFFQENGFVYVHTPIITGSDAEGAGEM--FRVTTL 179

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             + + K            +     L  S + S +   AA    I+ F   +R       
Sbjct: 180 DLNDLPKGEDGKVDSSKDFFGKETNLTVSGQLSGETYCAA-FRNIYTFGPTFRAEYSNTA 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E  M+    +++   +                F++     + 
Sbjct: 239 RHASEFWMIEPEIAFADLEANMELAEAMVKYIIKYV----LEQCPEEMEFFNQFIEKGLF 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N + G                  +++G +  +   W           +     
Sbjct: 295 DKLNNVLNSEFGRLTYTE-------AIEILEKSGKKFDYPVKWGIDLQSEHERYLAEEYF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 L  YP    A       D +  +  +L A  I       +  D +E        
Sbjct: 348 KKPV-FLTDYPKDIKAFYMKLNEDGKTVRAMDLLAPGIGEIIGGSQREDNLEILE----- 401

Query: 292 MQEKKKIYNETYPI-DEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +I      I D  F   L        SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 402 ----GRINELGMNIEDYGFYLDLRKYGSFPHSGYGLGFERIIMYITGMTNIRDVIPFPRT 457


>gi|50306525|ref|XP_453236.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642370|emb|CAH00332.1| KLLA0D03839p [Kluyveromyces lactis]
          Length = 555

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 58/352 (16%), Positives = 114/352 (32%), Gaps = 45/352 (12%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               ++ + +  RE+    +F E+ +  L  +P +E     F
Sbjct: 227 DTRLDSRVIDLRTVTNQAIFRIQSGVCALFREFLTNKKFTEVHTPKLLGAP-SEGGSNVF 285

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                   + +   YL  SP+   ++L+AA  E++F  A  +R        H  EFT L+
Sbjct: 286 EVT-----YFKGKSYLAQSPQLYKQQLIAADFERVFEVAPVFRAENSNTHRHMTEFTGLD 340

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A E +   + D +  +        +  ++ +          E               
Sbjct: 341 LEMAFEEHYDEVVDTLAELFVFIFSQLKTRYAKEIALVRKQYPVEEF------------- 387

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                    +          ++AG  V   +  S    ++L + +      +   ILD++
Sbjct: 388 KLPKDGKMVRIPFKEGIALLREAGKDVDDFEDLSTENEKLLGKLVRDKYETD-FYILDKF 446

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P             DPR++  ++ +    E+ +    + D    + R            +
Sbjct: 447 PLAIRPFYTMPDAEDPRYSNSYDFFMRGEEILSGAQRIHDADLLKERMNA---------H 497

Query: 301 ETYPID---EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E +P D   +D+        P  +G  +G +R+VM      NI      P  
Sbjct: 498 EVHPEDPGLKDYCEAFTYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRD 549


>gi|329929807|ref|ZP_08283483.1| asparagine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328935785|gb|EGG32246.1| asparagine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 431

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/350 (17%), Positives = 113/350 (32%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++R  ++ R  I  +++EYF  N F  +D   L  +    T      
Sbjct: 116 MDHRHLWLRT--QKQRAIMVIRAEIIRAVQEYFDTNGFTLVDPPILTPTSAEGT------ 167

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T L    +  +  YL  S +   +    A   K++ F   +R  +     H  EF M+E 
Sbjct: 168 TNLFHTKYFDEDAYLTQSGQLYMEAAAMA-LGKVYSFGPTFRAEKSKTRRHLIEFWMIEP 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E+ ++     I    +   +             S+ E I              
Sbjct: 227 EMAFTDHEESLQVQEQFISHVVQSVVKNCRQELETIGRDISKLEAI-------------- 272

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                    P   + Y +A +       D  W + F       I      +    +  YP
Sbjct: 273 -------QAPFPRITYDEAIEFLHTQDFDIPWGEDFGAPHETAIAEKY--DKPVFITHYP 323

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           A   +      P  P      ++ A     E+      + DP     RF++        +
Sbjct: 324 AGIKAFYMKPDPNRPEVVLCADMIAPEGYGEIIGGSQRIDDPQLLEERFKE--------H 375

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +    + ++          SG  +G +R V  + G +++ E I  P +
Sbjct: 376 DLSMETYQWYMDLRKYGTVPHSGFGLGLERTVAWICGLDHVRETIPFPRT 425


>gi|161611325|ref|NP_967990.2| asparaginyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 463

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 107/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F E  F+ +++  +  S       +  F    +
Sbjct: 122 AHLRPRTNTFSAVFRVRSVLAYAIHKFFNEQNFVYVNTPIITGSDAEGAGEM--FRVTTL 179

Query: 68  IQDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             D             +  +     L  S +    +   A    I+ F   +R       
Sbjct: 180 KLDKPPRKEDGSIDASQDFFGKETNLTVSGQL-NGETFCAAFRNIYTFGPTFRAENSNTS 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+   ++I+                    F++     + 
Sbjct: 239 RHAAEFWMIEPEIAFADLTANMELAEDMIKYIIRYV----MEQCPEEMEFFNQFVEKGLF 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N + G                   + G +  +   W           +     
Sbjct: 295 DKLNNVLNNNFGRVTYTE-------AIDILLKCGKKFEYPVQWGIDMQSEHERYLAEEHF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +  +  +L A  I       +  D +E+     K+
Sbjct: 348 KKPV-FVTDYPKDIKAFYMKLNEDGKTVRAMDLLAPGIGEIIGGSQREDNLEKLESRMKQ 406

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     ++ E Y    D           +G  +GF+R++M VTG  NI +VI  P +
Sbjct: 407 V----GLHPEEYSFYTDLRR--YGTFPHAGYGLGFERMLMYVTGMGNIRDVIPFPRT 457


>gi|75909835|ref|YP_324131.1| asparaginyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75703560|gb|ABA23236.1| Asparaginyl-tRNA synthetase, class IIb [Anabaena variabilis ATCC
           29413]
          Length = 463

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 59/356 (16%), Positives = 111/356 (31%), Gaps = 43/356 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF------ 62
           H R R          RN   +++ ++F E  F+ + +  +  S       + +       
Sbjct: 123 HLRSRTNSFGAVFRVRNACSAAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTSLDLK 182

Query: 63  ---STELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
               TE    D+      KP YL  S +    +++A     ++ F   +R        H 
Sbjct: 183 QIPRTENQGIDYSQDFFAKPTYLTVSGQLEA-EVMAMAFSNVYTFGPTFRAENSNTSRHL 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E  M      ++       +K                  T     
Sbjct: 242 AEFWMVEPEMAFCDLEGDMDLAEAFLKHIFNHVLEKCPEDMEFFNQRIDNTVLATAE--- 298

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                       +  ++          ++A ++  +  +W           +   L    
Sbjct: 299 --------NIINNQFERLTYTDAIKLLEKADVKFEYPVSWGLDLQSEHERYLAEQLFKKP 350

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YPA   A       D +  +          L     E++   ++  R   ++ E
Sbjct: 351 V-IVTDYPAQIKAFYMRLSDDEKTVRAM------DVLAPKIGEIIGGSQREERL--DVLE 401

Query: 295 KKKIYNETYPID-EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++ +     P D   +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 402 RRILAQGMQPEDLWWYLDLRRYGTVPHAGFGLGFERLVQFITGMGNIRDVIPFPRT 457


>gi|172057782|ref|YP_001814242.1| asparaginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990303|gb|ACB61225.1| asparaginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 432

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 114/349 (32%), Gaps = 41/349 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    R+   ++ RN +  +  E+F +  FI++D   L   +P         
Sbjct: 115 MDNRHLWLRSK--RQHAVMVVRNELIRATYEFFNQEGFIKVDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTELFHTKYFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMME 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   ++  ++   N +    + A +       +     +  E I       +Y    
Sbjct: 225 PEMAFYDHDMNLEVQENYVSHLVQSALKNCRPELELLERDLTVLENIQAPFPRVKYT--- 281

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++ G     D  + D F       I           +  +
Sbjct: 282 --------------EAIDMLKEQGFD---DIEFGDDFGAPHETAIANTFA--RPVFITHW 322

Query: 242 PAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           P +P F    +L A          E++   ++   FEK +   K+   
Sbjct: 323 PKAIKPFYMKEDPENPGFVLCDDLIAP-----EGYGEIVGGSQREEDFEKLLAGMKEHDL 377

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     + +L          SG  +G +R V  +TG  ++ E I  P  
Sbjct: 378 DETGAYKWYLETRKYGSVPHSGFGLGLERTVAWITGVEHVRETIPFPRL 426


>gi|317061684|ref|ZP_07926169.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687360|gb|EFS24195.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 461

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 105/359 (29%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+    ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 121 HLRPRTNTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITGSDAEGAGEM--FRITTLD 178

Query: 69  QDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
            + + K            +     L  S +    +   A    I+ F   +R        
Sbjct: 179 LNDLPKKEDGTVNFQKDFFGKSTNLTVSGQL-NGETYCAAFRNIYTFGPTFRAEYSNTAR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +  M     +++                  N F++     + +
Sbjct: 238 HASEFWMIEPEMAFADLDVNMDIAEKMVKYIIRYVMDTCPE----EMNFFNQFIEKGLFD 293

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N D G                  +++G +  +   W           +      
Sbjct: 294 KLNNVLNNDFGRLSYTE-------AIDILKKSGKKFEYPVEWGIDLQSEHERYLAEEYFK 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               ++  YP    A       D +  +  +L A  I E+        +      R  + 
Sbjct: 347 KPVFLV-DYPKDIKAFYMKLNEDGKTVRAMDLLAPQIGEIIGGSQREDNLEILEQRISEL 405

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              K+         D  F   L        SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 406 GMNKE---------DYSFYLDLRKYGSFPHSGYGLGFERMIMYLTGMANIRDVIPFPRT 455


>gi|238923547|ref|YP_002937063.1| aspartyl-tRNA synthetase, non-discriminating [Eubacterium rectale
           ATCC 33656]
 gi|238875222|gb|ACR74929.1| aspartyl-tRNA synthetase, non-discriminating [Eubacterium rectale
           ATCC 33656]
          Length = 461

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 108/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  I    R++   N F EI +  L   S     ++          ++ 
Sbjct: 153 RNPRERATFRIQEGITRGFRDFLYNNGFTEIHTPKLGAKSAEGGANL-------FKLEYF 205

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P  LQ SP+F  +  +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 206 HRPAILQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 264

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            + +             +                   T          I L      P  
Sbjct: 265 DIMEMETGFLQYTMELLK-------------------TSYAKELELLKIKLPDVTSIPRV 305

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                    A++   +  +          ++ +  +   G +    +  YP+ +     +
Sbjct: 306 RFDEAKQRVAEKYNRQFRNPFDLEPEEEVLIGQYFKEEYGSD-FVFVTHYPSKKRPFYAM 364

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               D  +T  F+L    +E+      + D  +   +       K+ +  E     E +L
Sbjct: 365 DDPADETYTLSFDLLFRGLEITTGGQRIHDYNKLMEKI-----AKRGMETEGM---ESYL 416

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     MP   G+ +G +RL M + G +N+ E    P  
Sbjct: 417 SAFKYGMPPHGGLGIGLERLTMQLIGEDNVREATLFPRD 455


>gi|308233555|ref|ZP_07664292.1| asparaginyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943357|ref|ZP_08240822.1| asparagine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491326|gb|EGF23100.1| asparagine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 466

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 56/363 (15%), Positives = 108/363 (29%), Gaps = 37/363 (10%)

Query: 6   SQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           S+ +     H R R          R+    ++ ++F E  F+ + +  +  S       +
Sbjct: 115 SREFLRTQQHLRARTNLFRAVFRVRSTAAFAIHKFFQERGFVYVHTPIITSSDAEGAGEM 174

Query: 60  RAFSTELIIQ------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              +T  +              D    P  L  S +   +   A     ++ F   +R  
Sbjct: 175 FKVTTFDLAHVPMKDGAVDYSQDFFGAPTSLTVSGQLEAENF-AMSFGDVYTFGPTFRAE 233

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                 H  EF M+E   A    +  M     +++                    F++  
Sbjct: 234 NSNTRRHAAEFWMVEPEMAFCDLKGYMDCAEAMLKYVISYV----MDACPYEMELFNKFV 289

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              +       A+ D           D   +  +AQ  G    +  +W           +
Sbjct: 290 DKGLQARLEHVAHSDFARVSY----TDAISILQEAQAQGHDFTYPVSWGVDLQTEHERYL 345

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                      +  YPA   A       D +     +     I       E++   ++  
Sbjct: 346 TEEHFKKPT-FVTDYPAEIKAFYMRMNDDDKTVAAADCLVPGI------GEIIGGSQREE 398

Query: 287 RFEK-EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R ++ E + K    +         L         +G  +GF+RLVM +TG +NI +V+  
Sbjct: 399 RLDRLEQRIKDLGMDPKQYAYYCDLRK-YGSCHHAGFGLGFERLVMYLTGVDNIRDVLPH 457

Query: 346 PFS 348
           P +
Sbjct: 458 PRT 460


>gi|308161459|gb|EFO63904.1| Aspartyl-tRNA synthetase [Giardia lamblia P15]
          Length = 551

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 111/335 (33%), Gaps = 32/335 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  +  R+ I    R +  +  FIEI++   +  +             +   ++      
Sbjct: 240 QAIMRVRSAIVHEFRSFLDKAGFIEINTPKIIAGTSEGGAA-------VFGVNYFNTKAC 292

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  +++G  +++     +R        H  EFT L+           +   
Sbjct: 293 LAQSPQLYKQMCISSGFGRVYEVGPVFRAENSHTHRHLCEFTGLDLEMEIYESYMEVLTL 352

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           +  +        +   S            + I++          +     D     +   
Sbjct: 353 LGDLMKHIFKTVEARCS------------KEISIIRTQYDLTVPEPLIWADETVIINFCD 400

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                Q AG   +  D  +    R L + ++     +   ILD+YP           P D
Sbjct: 401 GIKMLQDAGYEASPLDDLNTENERALGKLVKEKYNTD-FYILDKYPLSVRPFYTMPDPYD 459

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
            R++  ++++    E+C+    + DP       EK+ +E+     E+      ++     
Sbjct: 460 SRYSNSYDMFIRGEEICSGAQRVHDP----ELLEKQCRERNV-DPESL---RSYIDAFKY 511

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                 G  +G +R+VML+ G  N  +    P +Q
Sbjct: 512 GCAPHGGAGLGLERIVMLMLGIENCRQTCLFPRTQ 546


>gi|255720006|ref|XP_002556283.1| KLTH0H09394p [Lachancea thermotolerans]
 gi|238942249|emb|CAR30421.1| KLTH0H09394p [Lachancea thermotolerans]
          Length = 601

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 112/349 (32%), Gaps = 39/349 (11%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               ++ +    RE+  + +F+EI +  L  +P +E     F
Sbjct: 273 DTRLDARVIDLRTATNQAIFRIQSGVCELFREFLAKRKFVEIHTPKLLGAP-SEGGANVF 331

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                   + +   YL  SP+F  ++L+AA  E++F  A  +R        H  EF  L+
Sbjct: 332 EVT-----YFKGKSYLAQSPQFYKQELIAADFERVFEVAPVFRAENSNTHRHMTEFIGLD 386

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A E +   + D ++ +        +  ++ +          E               
Sbjct: 387 LEMAFEEHYDEVIDVLSELFVFIFSELKTRYAKEIALVRKQYPVEEF------------- 433

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                    +          + AG  V   +  S    + L   +      +   ILD++
Sbjct: 434 KLPKDGKMVRLAYKDGIAMLKAAGKEVGELEDLSTENEKFLGALVREKYDTD-FYILDKF 492

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           P DPR++  ++ +    E+ +    + D    + R            +
Sbjct: 493 PLEVRPFYTMPDPVDPRYSNSYDFFMRGEEILSGAQRIHDANFLKER------MSHHGLS 546

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P  +D++       P  +G  +G +R+VM      NI      P  
Sbjct: 547 PEDPGLKDYVDSFTYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPRD 595


>gi|270645372|ref|ZP_06222181.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270317246|gb|EFA28823.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 183

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 1/119 (0%)

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   T L  +PA  S LA     +P  T RFEL+    E+ N   EL D  +Q  RF+ +
Sbjct: 63  LIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQ 122

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A +I +VI  P  +
Sbjct: 123 VAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAPSIRDVILFPAMR 181


>gi|317128623|ref|YP_004094905.1| asparaginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315473571|gb|ADU30174.1| asparaginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 429

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/354 (17%), Positives = 105/354 (29%), Gaps = 53/354 (14%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F E  F ++D   L   S          
Sbjct: 114 MDHRHLWLRSK--RQHAIMRVRNEIIRATYEFFNEQGFSKVDPPILTGSSAEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T L    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTNLFHTKYFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  +      +    +                 S+ E I             
Sbjct: 224 PEMAFMDHEDSLVVQEQYVSHVVQAVLANCKQELQALERDTSKLENI------------- 270

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                     P   + Y +A     +  H+  W + F       I      +    +  Y
Sbjct: 271 --------VAPFPRITYDEAIDMLKKEGHEIEWGEDFGAPHETAIAEKY--DKPVFITHY 320

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           PA   +      P         +L A          E++       R + E   K++   
Sbjct: 321 PAEIKAFYMKPDPNREEVVLCADLIAP-----EGYGEIIGGS---QRIDDEDLLKQRYDE 372

Query: 301 -----ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E+Y     +L          SG  +G +R V  + G  ++ E I  P  
Sbjct: 373 HNLSEESYQ---WYLDLRKYGSVPHSGFGLGLERTVAWMCGVEHVRETIPFPRL 423


>gi|302348210|ref|YP_003815848.1| Asparaginyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328622|gb|ADL18817.1| Asparaginyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 432

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 115/351 (32%), Gaps = 44/351 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           +  +  W R     +   +  R  +  +LR YF+ N + E+    L  S   G  T    
Sbjct: 116 LDIRHLWLRSRRLTQ--IMRIRATVLEALRNYFISNGWWEVSPPILTQSAVEGGAT---- 169

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L   D   +  YL  S +F  + ++ +  E+++    ++R        H  E+  L
Sbjct: 170 ----LFPVDFFGRKAYLSQSAQFYLEVMIFS-LERVWSLTPSFRAERSRTRRHLYEYWHL 224

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A      +MK    +++ A +    K                     +   ++   
Sbjct: 225 EGEAAWMDMHDMMKFVEGLVKSAVKAVLDK--------------------RQEELQFLRR 264

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           +     +        + Y +A +   +      W D       + +     ++    L  
Sbjct: 265 NQEPLEETLKSSFEEVTYDEAIERLQKRGFKIKWGDDIGADEEKAL--TQDLSVPFFLTM 322

Query: 241 YPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           +P    S         P     F+L     E      E++   ++  R++  +Q  K+  
Sbjct: 323 FPKHLKSFYMKTCDRRPEVVLGFDL-----EAPEGYGEVVGGSQREDRYDVLLQRIKESN 377

Query: 300 NETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                  + +L          SG  +G DRLVM + G ++I + I  P  +
Sbjct: 378 LNPDDY-QWYLDLRRYGSVPHSGFGLGVDRLVMWIAGLDHIRDSIPFPRLR 427


>gi|119509340|ref|ZP_01628489.1| asparaginyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119465954|gb|EAW46842.1| asparaginyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 463

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 121/356 (33%), Gaps = 43/356 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF------ 62
           H R R          RN   +++ E+F +  F+ + +  +  +       + +       
Sbjct: 123 HLRSRTNSFGAVFRVRNACSAAIHEFFQQRGFLWVHTPIITANDCEGAGELFSVTGLDLK 182

Query: 63  ---STELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
               T+    D+      KP YL  S +    +++A     ++ FA  +R        H 
Sbjct: 183 NIPRTKSEAVDYTQDFFGKPTYLTVSGQLEA-EVMAMAFSNVYTFAPTFRAENSNTSRHL 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E  M      ++   +   +K       +   F++    TV E  
Sbjct: 242 AEFWMVEPEMAFCDLEGNMDLAEAFLKHVFKYVLEKCPE----DMEFFNQRIDKTVLETA 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                       +  ++          ++A ++  +   W           +  +L    
Sbjct: 298 -------DNIINNQFERLTYTEAVKLLEKADVKFEYPVNWGLDLQSEHERYLAEHLFKKP 350

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YPA   A       D +  +  ++      L     E++   ++  R E  + E
Sbjct: 351 V-IVTDYPAQIKAFYMRVNDDEKTVRAMDI------LAPKIGEIIGGSQREERLE--VLE 401

Query: 295 KKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++ +     P D  +   L        +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 402 RRILAQGMQPEDLWWYMDLRRYGTVPHAGFGLGFERLVQFMTGMANIRDVIPFPRT 457


>gi|325959112|ref|YP_004290578.1| aspartyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330544|gb|ADZ09606.1| aspartyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 439

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 109/351 (31%), Gaps = 55/351 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D     R               ++ +  S+R +     + EI++  L   +    T +  
Sbjct: 125 DTRLDSRFIDLRKHSVSAIFKVKSRMLHSVRNFLESENYTEINTPKLVGSATEGGTELFP 184

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTML 120
            +       +  +  +L  SP+   + ++A+G + ++  A  +R  E     H  E   +
Sbjct: 185 IT-------YFEREAFLGQSPQLYKQMMMASGFDNVYEIAPIFRAEEHDTLRHLNEVISI 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   A       M     ++  A     +      +                        
Sbjct: 238 DVETAFTDQIDAMNILEKMVVKAITDVKEHCKDALDT--------------------LEF 277

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL        + +   +       G+++ H +  S    +++ E +      +    +  
Sbjct: 278 DLQIPETPFPRIEYDEMVEMVNNKGVKMEHGEDMSRAAEKVMGELM------DGYYFITA 331

Query: 241 YPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           +P             DP  +  F+L   ++E+ +    + +            + K K  
Sbjct: 332 WPTDIKPFYVQPSAEDPAKSCAFDLMYKDLEISSGAMRIHNHDLLVE------KIKSKGL 385

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           N        +LA     MP  +G  +G +R  M +TG  NI E +  P  +
Sbjct: 386 NPDSF--NRYLAAFEYGMPPHAGWGVGAERFTMTMTGQTNIRETVLFPRDR 434


>gi|308501867|ref|XP_003113118.1| CRE-DARS-1 protein [Caenorhabditis remanei]
 gi|308265419|gb|EFP09372.1| CRE-DARS-1 protein [Caenorhabditis remanei]
          Length = 540

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 108/349 (30%), Gaps = 34/349 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               +  + +  R       FIEI +  +  +P +E     F
Sbjct: 207 DTRLDNRVLDLRTTTSHAIFRIQAGVCNQFRNILDARGFIEIMAPKIISAP-SEGGANVF 265

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                         YL  SP+   +  +A   EK++     +R  +     H  EF  L+
Sbjct: 266 EVSYFKGSA-----YLAQSPQLYKQMAIAGDFEKVYTIGPVFRAEDSNTHRHMTEFVGLD 320

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +         I +    +A      F+ +      E   +        +   +
Sbjct: 321 LEMAFNFHYHEKLKFYFIFQVMETIAEVLTQMFKGLQEKYQDEIAAVGNQYPAEPFQFCE 380

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L  PD           ++ GI +  +D  S    + L + ++     +   +LD++
Sbjct: 381 KPLILKYPD------AIALLRENGIEIGDEDDLSTPVEKFLGKLVKEKYSTD-FYVLDKF 433

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P             D +++  ++++    E+ +    + D      R      +  KI  
Sbjct: 434 PLAVRPFYTMPDFKDKKYSNSYDMFMRGEEILSGAQRIHDADMLVERATHHQVDLAKI-- 491

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 + ++       P  +G  +G +R+ ML  G +NI      P  
Sbjct: 492 ------QSYIDAFKYGCPPHAGGGIGLERVTMLFLGLHNIRLASLFPRD 534


>gi|254424532|ref|ZP_05038250.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196192021|gb|EDX86985.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 468

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 107/356 (30%), Gaps = 39/356 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF------ 62
           H R R          RN   +++ E+F +  F+ + +  L  S       +         
Sbjct: 124 HLRSRTNTLGAVFRVRNACATAIHEFFWKRDFLWMHTPILTASDCEGAGEMFTVTRFNLD 183

Query: 63  ---STELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
               TE    D+      +P YL  S +    ++++     ++ F   +R        H 
Sbjct: 184 SIPKTESGKADYGQDFFGRPAYLTVSGQLEA-EIMSMAFSNVYTFGPTFRAENSNTARHL 242

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E  M      ++                +   F++    TV E  
Sbjct: 243 AEFWMVEPEMAFCDLEGNMDLAEAFLKYVFSYV----MEHCADDMAFFNQRIDKTVLETA 298

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEKIEPNLGIN 233
               + D           D      +A + G +       W           +   L   
Sbjct: 299 ENIIDNDFERITY----TDAIAQLERAIENGDKTFEFPVKWGIDLQSEHERYLAEELFKK 354

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YPA   A       D +             L     E++   ++  R +   +
Sbjct: 355 PV-IVTDYPAEIKAFYMRLNDDNKTVAAM------DVLAPRIGEIIGGAQREERLDVLER 407

Query: 294 EKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K            +L          +G  +GF+RLV  +TG +NI +VI  P +
Sbjct: 408 RIKAAGLPQEDY-WWYLDLRRYGTVPHAGFGLGFERLVQFMTGMSNIRDVIPFPRT 462


>gi|149246568|ref|XP_001527720.1| aspartyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146447674|gb|EDK42062.1| aspartyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 573

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 52/361 (14%), Positives = 112/361 (31%), Gaps = 45/361 (12%)

Query: 6   SQPWWNR----DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQ 50
           ++         D     R               ++ +    RE+  + +F EI +   + 
Sbjct: 234 AEELGLPVVNLDTRLDARVIDLRTPTNQAIFKIQSGVCQLFREFLTKKKFTEIHTPKIIG 293

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
            +    ++       +   ++ +   +L  SP+   ++L+A   E++F  A  +R     
Sbjct: 294 AASEGGSN-------VFEINYFKGSAFLAQSPQLYKQQLIAGDFERVFEIAPVFRAENSN 346

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EFT L+   A E +   + + +  +        +  F  +          E   
Sbjct: 347 THRHMTEFTGLDLEMAFEEHYDEVLEVLEELFVFIFTELKMRFGKEIDTVRRQFPVEEF- 405

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
                                +          ++AG  V   +  S    R+L + +   
Sbjct: 406 ------------KIPKDGKMVKLHFKEGVAMLREAGKEVGDYEDLSTENERLLGKLVREK 453

Query: 230 LGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +   ILD++P             DP ++  ++ +    E+ +    + DP   + R 
Sbjct: 454 YDTD-FYILDKFPLAIRPFYTMPDAEDPNYSNSYDFFMRGEEILSGAQRIHDPELLKER- 511

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 +    +   P   D++       P  +G  +G +R+VM      NI      P 
Sbjct: 512 -----MRAHEVDPNVPGLNDYVDAFTYGCPPHAGGGIGLERVVMFFLDLKNIRRASLFPR 566

Query: 348 S 348
            
Sbjct: 567 D 567


>gi|77918200|ref|YP_356015.1| asparaginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|77544283|gb|ABA87845.1| asparaginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 468

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/354 (18%), Positives = 106/354 (29%), Gaps = 38/354 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE-------TH 58
            H R R          R+ +  ++  +F E  F+ + +  +  +      E         
Sbjct: 128 AHLRPRANTFGAVFRMRSALSFAIHRFFRERGFLYVHTPIITANDCEGAGEMFRVSTLPA 187

Query: 59  IRAFSTELII---QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQ 114
            R   TE  I   QD   +   L  S +   +    A    I+ F   +R        H 
Sbjct: 188 DRPPLTEGKIDWRQDFFGEKTGLTVSGQLQGELFATA-FSDIYTFGPTFRAENSHTSRHA 246

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A              +R     A  +         N   EP  I   E  
Sbjct: 247 AEFWMIEPEIAFADLADDCALAEEFLRYLVRFALDECGEDLAF-FNQRIEPGLIDKLETL 305

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
           AR           +           + QQA +   +   W           +   +    
Sbjct: 306 ARA----------DFSVMTYSEAIRRLQQAPVDFEYPVAWGADLQSEHERYLTEQVVGGP 355

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  YPA   A       D R     +L    +       E++   ++  R +  M +
Sbjct: 356 L-FVTDYPADIKAFYMRLNDDGRTVAAMDLLVPRV------GEIIGGSQREERLDVLMGK 408

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +  E   +D             +G  +GF+RL+M VTG  NI +VI  P +
Sbjct: 409 MNSVGIEAQHLDWYLDTRRWGSCPHAGFGLGFERLLMYVTGMENIRDVIPFPRT 462


>gi|2961644|gb|AAC64260.1| lysyl-tRNA synthetase [Campylobacter jejuni]
          Length = 355

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 24/223 (10%)

Query: 3   QIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P +     D    YR+R              L R+ + S +R +F    F+E+++  +
Sbjct: 142 PLPEKYHGLTDIEQRYRKRYVDMIMNVEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMM 201

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G   + + F T     + +    +L+ +PE   K+L+  G E +F     +RN   
Sbjct: 202 HPIAGGA-NAKPFVT---FHNSLGVERFLRIAPELYLKRLIVGGFEAVFEINRCFRNEGM 257

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYI 168
              H PEFT +E+Y A+ +Y+ LM     +     +  N  K   F     N     E I
Sbjct: 258 DLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLDKLNLGKTIEFDGKMINFSKPFERI 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
           T  +A  +Y  +D           D+  +  + +  G      
Sbjct: 318 TYKDALCKYGGLDRD------LIEDKEKILTKLKADGFEANEK 354


>gi|323697660|ref|ZP_08109572.1| asparaginyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323457592|gb|EGB13457.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 455

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 56/354 (15%), Positives = 100/354 (28%), Gaps = 44/354 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRA 61
            H R R          R+ +  ++  +F +  F  + +  +  S      E    T +  
Sbjct: 121 AHLRPRTNKFGAMFRMRSHLAQAVHRFFADKGFFYVHTPIITGSDCEGAGEMFRVTALPP 180

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
            S E    D   KP  L  S + S +    +     + F   +R        H  EF M+
Sbjct: 181 GSPEPAENDFFGKPSNLTVSGQLSVEMFALS-LGDCYTFGPTFRAENSNTPRHAAEFWMI 239

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E           M     +I+                              E FA++ + 
Sbjct: 240 EPEICFADLNDDMDLGEEMIKYLVAHMLDTCAED----------------VELFAKWVDK 283

Query: 181 DLGTTLDNPDQPDRH-----LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
           DL  TL    +               ++   +  +   W           +         
Sbjct: 284 DLMATLTTILEKPFERLPYTEAISILKKTKKQFEYPVEWGIDLQTEHERFLCEEKFRKPV 343

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
             +  YP            D       +     I       E++   ++  R +      
Sbjct: 344 -YVYDYPKSIKPFYMRMNDDGNTVAAMDCLVPRI------GEIIGGSQREERLDVLTARM 396

Query: 296 KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++          +L          +G  MGF+R++MLVTG +NI +VI  P +
Sbjct: 397 DELGLNKDEY-WWYLDSRRYGTAPHAGFGMGFERMLMLVTGVHNIRDVIPFPRT 449


>gi|319935563|ref|ZP_08009997.1| asparaginyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319809440|gb|EFW05861.1| asparaginyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 461

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 104/344 (30%), Gaps = 29/344 (8%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETH----IRAFSTE 65
           H R R          R+++  ++ E+F    F+ + +  +  + G               
Sbjct: 131 HLRPRANTFYAIFRLRSVLSMAIHEFFQSQGFVYVHTPLITGNDGEGAGEMFRATTIDNT 190

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYR 124
              +D   K  +L  + +    +        ++ F  A+R        H  EF M+E   
Sbjct: 191 DFDKDFFGKEAFLTVTGQLHV-EAFCMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEI 249

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A    E  M    ++++   +   +                  +   E   R  ++    
Sbjct: 250 AFADLEDDMDLIEDMVKFCIDYVLENAPEEMKF-------FAQMIDKECIERITHV---- 298

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
              +  +          ++A ++  ++  W    +      I     I     L  YP  
Sbjct: 299 RNSDFKRMTYTEAVEILEKADVKFENEVKWGMDLNSEHERYICEQ-VIGGPVFLTDYPKE 357

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
             A       D +     +L    I       +  +  +   R  +E    K      + 
Sbjct: 358 IKAFYMRLNDDNKTVAACDLLVPGIGELVGGSQREERYDVLERIMEEKGMAK--DGLQWY 415

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +D           + +G  +GFDR +M +TG  NI +V   P +
Sbjct: 416 MDLR----RYGGCKHAGFGLGFDRFLMYLTGMQNIRDVEPFPRT 455


>gi|50286523|ref|XP_445690.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524995|emb|CAG58601.1| unnamed protein product [Candida glabrata]
          Length = 553

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 110/334 (32%), Gaps = 31/334 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           +     ++ + +  RE+    +F+E+ +   L  +         F        + +   Y
Sbjct: 241 QAIFRIQHGVCALFREFLANKKFVEVHTPKMLGAASEG--GANVFEVT-----YFKGKAY 293

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+F+ ++L+ A  EK+F     +R        H  EFT L+   A E +   + D 
Sbjct: 294 LAQSPQFNKQQLIVADFEKVFEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHYHEVLDV 353

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +        +K ++ +          E                        +     
Sbjct: 354 LSELFVFLFTELKKRYAKEIELVRKQYPVEEF-------------KLPKDGKMVRITYKE 400

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                ++AG  +   +  S    + L + +      +   ILD++P           P D
Sbjct: 401 GIQMLKEAGKDIGDFEDLSTENEKFLGKLVREKYDTD-FYILDKFPLEIRPFYTMPDPED 459

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           PR++  ++ +    E+ +    + D      R       K    +   P  +D+      
Sbjct: 460 PRYSNSYDFFMRGEEILSGAQRIHDHKMLMER------MKVHGLDPEDPGLKDYCDGFSY 513

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             P  +G  +G +R+VM      NI      P  
Sbjct: 514 GCPPHAGGGIGLERVVMFFLDLKNIRRASLFPRD 547


>gi|17136276|ref|NP_476609.1| Aspartyl-tRNA synthetase [Drosophila melanogaster]
 gi|7303387|gb|AAF58445.1| Aspartyl-tRNA synthetase [Drosophila melanogaster]
 gi|17944217|gb|AAL48003.1| GM14334p [Drosophila melanogaster]
 gi|220944800|gb|ACL84943.1| Aats-asp-PA [synthetic construct]
 gi|220954640|gb|ACL89863.1| Aats-asp-PA [synthetic construct]
          Length = 531

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 116/355 (32%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   E  F EI +  +  +  +E    
Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAA-SEGGAN 263

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K++     +R  +     H  EF  
Sbjct: 264 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVG 318

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                        +       +Y    E+  +   
Sbjct: 319 LDLEMAFKYHYHEVLHT---------------IGNTFTSIFKGLRDKYAKEIESVGQQYK 363

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +D    L+ P            ++AG+    ++  S    ++L   ++     +   ILD
Sbjct: 364 VDAFKFLEPPLILQFADGVAMLREAGVETGDEEDLSTPNEKLLGRLVKAKYDTD-FYILD 422

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P +P ++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 423 KFPLAIRPFYTMPDPNNPVYSNSYDMFMRGEEILSGAQRIHDP--------EYLIERAKH 474

Query: 299 YNETYPIDED----FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 475 ----HGIDTSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 525


>gi|169350983|ref|ZP_02867921.1| hypothetical protein CLOSPI_01760 [Clostridium spiroforme DSM 1552]
 gi|169292045|gb|EDS74178.1| hypothetical protein CLOSPI_01760 [Clostridium spiroforme DSM 1552]
          Length = 461

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 103/344 (29%), Gaps = 29/344 (8%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETH----IRAFSTE 65
           H R R          R+++  ++ E+F    F+ + +  +  + G               
Sbjct: 131 HLRPRANTFYAIFRLRSVLSMAIHEFFQSQGFVYVHTPIITSNDGEGAGEMFRATTIDGT 190

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYR 124
               D   K  +L  + +    +  A     ++ F  A+R        H  EF M+E   
Sbjct: 191 NFEDDFFEKEAFLTVTGQLHV-EAFAMAFRDVYTFGPAFRAENSNTSRHASEFWMIEPEI 249

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A    E  M    ++++   +          N           +   +   R   +    
Sbjct: 250 AFADLEDDMDLIEDMVKYCIDYVLDNAPEEMNF-------FASMIDKDCINRITKV---- 298

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
              +  +          ++A ++  +  +W    +      I   +       L  YP  
Sbjct: 299 RNSDFKRMTYTEAIEILEKADVKFKNKVSWGMDLNSEHERYICEQVVKGPV-FLTDYPKE 357

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
             A       D +     +L    I       +  +  +   +   E    K   N  + 
Sbjct: 358 IKAFYMRLNDDNKTVAACDLLVPGIGELVGGSQREERYDVLEKIMDEKNMTK--DNLQWY 415

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +D           + +G  +GFDR +M +TG  NI +V   P +
Sbjct: 416 MDLR----RYGGCKHAGFGLGFDRFLMYLTGMQNIRDVEPFPRT 455


>gi|158335177|ref|YP_001516349.1| asparaginyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158305418|gb|ABW27035.1| asparaginyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 463

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 102/356 (28%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAF--- 62
            H R R          RN    ++ ++F +  F+ I +  +  S      E         
Sbjct: 122 AHLRSRTNTLGSVFRIRNACSQAIHQFFQDRDFMWIHTPIITASDCEGAGEQLAVTSLNL 181

Query: 63  --------STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                    T    QD   KP YL  S +    +++A+    ++ F   +R        H
Sbjct: 182 QDVPLSEDQTVDYSQDFFGKPTYLTVSGQL-EGEIMASAFCNVYTFGPTFRAENSNTSRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M      ++   +   ++             +    T    
Sbjct: 241 LAEFWMVEPEVAFCDLQGDMDLAEAFLKHVFKSVLEQCPEDFEFFNLRIDKSVLETA--- 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                           ++        Q ++A  +      W           +   L   
Sbjct: 298 --------DTIINSEFERITYTEAVNQLEKASRKFEFPVEWGLDLQSEHERYLSEELFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP    A       D +     ++    I       E++   ++  R +   Q
Sbjct: 350 PV-IVTDYPKQIKAFYMRMNDDDKTVAAMDVLVPKI------GEIIGGSQREERLDLLEQ 402

Query: 294 EKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                          +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 403 RIVAQGLPLEDY-WWYLDLRRYGTVPHAGFGLGFERLVQFMTGMANIRDVIPFPRT 457


>gi|317059364|ref|ZP_07923849.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313685040|gb|EFS21875.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 461

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 108/358 (30%), Gaps = 47/358 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+    ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 121 HLRARTNTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEM--FRITTLD 178

Query: 69  QDH----------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
            ++           +K  +     L  S +    +   A    I+ F   +R        
Sbjct: 179 LNNVPKNEDGSINFQKDFFGKSTNLTVSGQL-NGETYCAAFRNIYTFGPTFRAEYSNTAR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M     +++       +          N F++     + +
Sbjct: 238 HASEFWMIEPEMAFADLEVNMDIAEKMVKYIIRYVMETCPE----EMNFFNQFIEKGLFD 293

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N D G                  +++G +  +   W           +      
Sbjct: 294 KLNNVLNNDFGRLTYTE-------AIDILEKSGKKFEYPVKWGIDLQSEHERYLAEEHFK 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               ++  YP    A       D +  +  +L A  I       +  D +E       E+
Sbjct: 347 KPVFLV-DYPKDIKAFYMKLNEDGKTVRAMDLLAPQIGEIIGGSQREDNLEILENRMNEL 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +  E    D  F   L        SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 406 ----GMDKE----DYSFYLDLRKYGSFPHSGYGLGFERMIMYLTGMANIRDVIPFPRT 455


>gi|167761368|ref|ZP_02433495.1| hypothetical protein CLOSCI_03776 [Clostridium scindens ATCC 35704]
 gi|167661034|gb|EDS05164.1| hypothetical protein CLOSCI_03776 [Clostridium scindens ATCC 35704]
          Length = 444

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 114/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  +  + R++     F EI +  +         +I          ++ 
Sbjct: 136 RNIRERAKFRIQEGLTRAFRDFLYSQGFTEIHTPKIGAKGAEGGANI-------FKLEYF 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P  L  SP+F  +  +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 189 HRPAVLAQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +          A    +K ++ +                    +   I L      P  
Sbjct: 248 DIMAMETGYLQYAMELLKKDYAQE-------------------LKILGITLPEVEKIPAV 288

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +    +++ G ++ +         +++ +  +   G +    +  YP+ +     +
Sbjct: 289 EFSDIKEKVSEKYGHKMRNPFDLEPEEEQLISQYAKEEWGSD-FVFVTHYPSKKRPFYAM 347

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               DPR+T  F+L    +E+      + D      + +      + +  E     E +L
Sbjct: 348 DDPKDPRYTLSFDLLFRGMEITTGGQRIHDYEMLVEKIKA-----RGMSQEGM---EQYL 399

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   GI +G +RL M + G +N+ E    P  
Sbjct: 400 DTFKHGMPPHGGIGIGLERLTMKLIGEDNVRETTLFPRD 438


>gi|257464166|ref|ZP_05628547.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 463

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 105/359 (29%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+    ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITGSDAEGAGEM--FRITTLD 180

Query: 69  QDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
            + + K            +     L  S +    +   A    I+ F   +R        
Sbjct: 181 LNDLPKKEDGTVNFQKDFFGKSTNLTVSGQL-NGETYCAAFRNIYTFGPTFRAEYSNTAR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +  M     +++                  N F++     + +
Sbjct: 240 HASEFWMIEPEMAFADLDVNMDIAEKMVKYIIRYVMDTCPE----EMNFFNQFIEKGLFD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N D G                  +++G +  +   W           +      
Sbjct: 296 KLNNVLNNDFGRLSYTE-------AIDILKKSGKKFEYPVEWGIDLQSEHERYLAEEYFK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               ++  YP    A       D +  +  +L A  I E+        +      R  + 
Sbjct: 349 KPVFLV-DYPKDIKAFYMKLNEDGKTVRAMDLLAPQIGEIIGGSQREDNLEILEQRISEL 407

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              K+         D  F   L        SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 408 GMNKE---------DYSFYLDLRKYGSFPHSGYGLGFERMIMYLTGMANIRDVIPFPRT 457


>gi|138895750|ref|YP_001126203.1| asparaginyl-tRNA synthetase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196248632|ref|ZP_03147332.1| asparaginyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|166231665|sp|A4IQ54|SYN_GEOTN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|134267263|gb|ABO67458.1| Asparaginyl-tRNA synthetase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211508|gb|EDY06267.1| asparaginyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 430

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 108/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN +  +  E+F E  F+++D+  L   +P         
Sbjct: 114 MDHRHLWLRSR--RQHAIMKIRNELIRATYEFFNERGFVKVDAPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  ++     +    +                      ++  +        D
Sbjct: 224 PEMAFYEFEDNLRLQEEYVSYLVQSV--------------------LSRCQLELGRLGRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +           R       +    +   D  W D F       I  +   +    +  Y
Sbjct: 264 VTKLELVKPPFPRLTYDEAIKLLHDKGFTDIEWGDDFGAPHETAIAES--FDKPVFITHY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P  P      +L A     E+    + + D    + R E+       +
Sbjct: 322 PTSLKPFYMQPDPNRPDVVLCADLIAPEGYGEIIGGSERIHDYELLKQRLEE-----HHL 376

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y   E +L          SG  +G +R V  + G  ++ E I  P  
Sbjct: 377 PLEAY---EWYLDLRKYGSVPHSGFGLGLERTVAWICGVEHVRETIPFPRL 424


>gi|315917959|ref|ZP_07914199.1| asparaginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313691834|gb|EFS28669.1| asparaginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 461

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 108/358 (30%), Gaps = 47/358 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+    ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 121 HLRARTNTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEM--FRITTLD 178

Query: 69  QDH----------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
            ++           +K  +     L  S +    +   A    I+ F   +R        
Sbjct: 179 LNNVPKNEDGSINFQKDFFGKSTNLTVSGQL-NGETYCAAFRNIYTFGPTFRAEYSNTAR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M     +++       +          N F++     + +
Sbjct: 238 HASEFWMIEPEMAFADLEVNMDIAEKMVKYIIRYVMETCPE----EMNFFNQFIEKGLFD 293

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N D G                  +++G +  +   W           +      
Sbjct: 294 KLNNVLNNDFGRLTYTE-------AIDILEKSGKKFEYPVKWGIDLQSEHERYLAEEHFK 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               ++  YP    A       D +  +  +L A  I       +  D +E       E+
Sbjct: 347 KPVFLV-DYPKDIKAFYMKLNEDGKTVRAMDLLAPQIGEIIGGSQREDNLEILETRMNEL 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +  E    D  F   L        SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 406 ----GMDKE----DYSFYLDLRKYGSFPHSGYGLGFERMIMYLTGMANIRDVIPFPRT 455


>gi|322369960|ref|ZP_08044522.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320550296|gb|EFW91948.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 432

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 56/364 (15%), Positives = 120/364 (32%), Gaps = 56/364 (15%)

Query: 4   IPSQPWW----NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P  P      +       R               R  +  ++RE F +    EI++  +
Sbjct: 102 LPLDPSGKVDADLSTRLDNRTLDARKEDVEAVFKIRGEVLRAVRETFRDLGCSEINTPKI 161

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             + G E       TEL    +  +  ++  SP+   + ++ +G E++F     +R  E 
Sbjct: 162 VAT-GTEGG-----TELFPITYFGEEAFMNQSPQLFKQLMVGSGLERVFEIGPIFRAEEH 215

Query: 110 -GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  E T +++  A   + + M  C  +++ A E   +                   
Sbjct: 216 NTPRHLNEATSIDFESAFYDHNEAMDACEAVVKAAYEGVAENC----------------- 258

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +      +ID      +  +        +    G  +     W D       + +  
Sbjct: 259 ---QDELDALDIDFEVPEGDFPRLTYEEAIERINATG-ELDEMLVWGDDLPTEGEKALGE 314

Query: 229 NLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           ++G      +  +P+         +  D   +  F++    +EL +              
Sbjct: 315 DVGT--HYFITDWPSEIKPFYIKDHDDDEELSTGFDMMHPRMELVSGGQREHRYDRLVEG 372

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE++      +  E +    D+   +    MP  +G  +G +RL+M + G +NI E +  
Sbjct: 373 FEQQ-----GLDPEAF----DYYTKMFKYGMPPHAGWGLGGERLIMTMLGLDNIREAVLF 423

Query: 346 PFSQ 349
           P  +
Sbjct: 424 PRDR 427


>gi|195333908|ref|XP_002033628.1| GM21429 [Drosophila sechellia]
 gi|194125598|gb|EDW47641.1| GM21429 [Drosophila sechellia]
          Length = 531

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 116/355 (32%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   E  F EI +  +  +  +E    
Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAA-SEGGAN 263

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K++     +R  +     H  EF  
Sbjct: 264 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVG 318

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                        +       +Y    E+  +   
Sbjct: 319 LDLEMAFKYHYHEVLHT---------------IGNTFTSIFKGLRDKYAKEIESVGQQYK 363

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +D    L+ P            ++AG+    ++  S    ++L   ++     +   ILD
Sbjct: 364 VDAFKFLEPPLILQFADGVAMLREAGVETGDEEDLSTPNEKLLGRLVKAKYDTD-FYILD 422

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P +P ++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 423 KFPLAIRPFYTMPDPNNPVYSNSYDMFMRGEEILSGAQRIHDP--------EYLIERAKH 474

Query: 299 YNETYPIDED----FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 475 ----HGIDTSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 525


>gi|167626487|ref|YP_001676987.1| tRNA synthetase, class II (D, K and N) [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|167596488|gb|ABZ86486.1| tRNA synthetase, class II (D, K and N) [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 307

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 92/325 (28%), Positives = 144/325 (44%), Gaps = 33/325 (10%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           + KR      +R YF   + +E+D+         +  I  F+ E +         YLQ+S
Sbjct: 6   IKKRAKYIEKIRTYFKNLEVLEVDTPLAYEFGVTDPFIDVFNIETV-----SGKRYLQSS 60

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE++ K+LLAAG   I+    A+R+   G LH+ EFTM+EWYR    Y QLM++  N+  
Sbjct: 61  PEYAMKRLLAAGSGSIYQICKAFRDEPCGQLHKHEFTMIEWYRVGVDYLQLMQEVENLFL 120

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
                 N                  Y++  EAF ++  I       NP       L    
Sbjct: 121 ALKPNLN----------------FIYLSYHEAFEKHYKI-------NPHNISLEHLQDIV 157

Query: 202 QQ--AGIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANI--YPADP 256
           ++    I+   + T +D    +   KIE N    +    +  Y   +SALA         
Sbjct: 158 KETVGDIQGLSNPTIADCLDILFSYKIERNLNQKDTIYFIYDYTIHQSALARKIYNQNQQ 217

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM 316
               RFE+++  IEL N   EL+D  EQ  RF  +++ +K+       ID   L C+  +
Sbjct: 218 LVAARFEVFSNGIELANGYYELIDKDEQLKRFNSDLEIRKQQNKAYLDIDYKLLNCIENI 277

Query: 317 PQSSGIAMGFDRLVMLVTGANNINE 341
           P+ SG+A+GFDRL+M +   + I +
Sbjct: 278 PECSGVALGFDRLLMSLENIDKIQD 302


>gi|302384563|ref|YP_003820385.1| asparaginyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302195191|gb|ADL02762.1| asparaginyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 463

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 104/362 (28%), Gaps = 55/362 (15%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMS-------------------LQ 50
           H R R          R++I  ++ ++F E  F+ + +                     L 
Sbjct: 123 HLRPRTNTFQAVFRVRSLIAYAIHQFFQERDFVYVHTPIITGSDCEGAGEMFQVTTLDLT 182

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
             P  E     F+     QD   KP  L  S +    +  A     I+ F   +R     
Sbjct: 183 NIPKTEEGAVDFT-----QDFFGKPTNLTVSGQL-NGETYAMAFRNIYTFGPTFRAENSN 236

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   A       M+   ++++                  N F++     
Sbjct: 237 TTRHAAEFWMIEPEMAFADLSDNMELAESMLKYVIRYV----LEHAPEEMNFFNQFVDKE 292

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           +        N +                    ++      +   W           +   
Sbjct: 293 LLNRLNHVLNSEFAHVTYTE-------AIALLEKHNDEFDYKVFWGCDLQTEHERYLTEQ 345

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRF 288
           L       +  YP    A       D +     +     I E+        D  +   R 
Sbjct: 346 LYKKPV-FVTDYPKEIKAFYMKMNPDNKTVAAVDCLVPGIGEIIGGSQREDDYDKLVARM 404

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           ++    K+         D DF   L      + +G  +GF+R VM +TG +NI +V+  P
Sbjct: 405 DELGLRKE---------DYDFYLDLRKFGSTRHAGFGLGFERCVMYLTGMSNIRDVVPFP 455

Query: 347 FS 348
            +
Sbjct: 456 RT 457


>gi|297529658|ref|YP_003670933.1| asparaginyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252910|gb|ADI26356.1| asparaginyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 431

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 108/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F+++D+  L   +P         
Sbjct: 115 MDHRHLWLRSR--RQHAIMKIRNEIIRATYEFFNDRGFVKVDAPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTELFHTKYFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMVE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  ++     +    +   ++                              D
Sbjct: 225 PEMAFYEFEDNLRLQEEYVSYLVQSVLERCRLELGR--------------------LGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +           R       +    +   D  W D F       I  +   +    +  Y
Sbjct: 265 VSKLELVKPPFPRLTYDEAIKLLHEKGLTDIEWGDDFGAPHETAIAES--FDKPVFITHY 322

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P  P      +L A     E+    + + D +  + R E+       +
Sbjct: 323 PTSLKPFYMQPDPNRPDVVLCADLIAPEGYGEIIGGSERIHDYVLLKRRLEE-----HHL 377

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y   E +L          SG  +G +R V  + G  ++ E I  P  
Sbjct: 378 PLEAY---EWYLDLRKYGSVPHSGFGLGLERTVAWICGVEHVRETIPFPRL 425


>gi|225569282|ref|ZP_03778307.1| hypothetical protein CLOHYLEM_05364 [Clostridium hylemonae DSM
           15053]
 gi|225162081|gb|EEG74700.1| hypothetical protein CLOHYLEM_05364 [Clostridium hylemonae DSM
           15053]
          Length = 443

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 113/365 (30%), Gaps = 53/365 (14%)

Query: 1   MHQIPSQPWWN----------RD---FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           M  +P   W            R     + R R     +  +  + R+Y     F EI + 
Sbjct: 109 MMPLPISKWKLNTSLEAKLNYRSISLRNLRERAKFRIQEGLTRAFRDYLYGQGFTEIHTP 168

Query: 48  SL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
            +   S     ++          D+  +P  LQ SP+   +  +    +++F  A  +R 
Sbjct: 169 KIGARSAEGGANL-------FRLDYFHRPAVLQQSPQLYKQM-MVGVFDRVFETAPVFRA 220

Query: 107 GEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
            +     H  E+T L++   +    + +          A       ++ +          
Sbjct: 221 EKHNTKRHLNEYTSLDFEMGYIDSFEEIMAMETGYIQYAMALLAGEYAAE---------- 270

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
                     +  +I L      P      +    A++ G ++ +          ++   
Sbjct: 271 ---------LKTLDITLPDAAKIPAVRFDEIKEKVAEKYGRKIKNPFDLEPEEELLISRY 321

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPIEQ 284
                G +    +  YP+ +     +    D R+T  F+L    +E+      + D    
Sbjct: 322 ALEEWGSD-FVFVTHYPSRKRPFYAMDDPADTRYTLSFDLLFRGMEITTGGQRIHDHGML 380

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           +       +   +   E     E +L      MP   GI +G +R  M + G +NI E  
Sbjct: 381 KD------KIAARGMTEDGL--EQYLEAFRHGMPPHGGIGIGLERFTMKLAGEDNIRETT 432

Query: 344 WTPFS 348
             P  
Sbjct: 433 LFPRD 437


>gi|261337323|ref|ZP_05965207.1| asparagine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277695|gb|EFA23549.1| asparagine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 467

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/354 (15%), Positives = 104/354 (29%), Gaps = 34/354 (9%)

Query: 13  DFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE------------ 56
               R    R     R++   ++ E+F    F+ +++  +  +                 
Sbjct: 124 HIRPRTNLFRAVFRIRSVAAMAIHEFFQSRGFVYVNTPIITTNDAEGAGEMFRVTTLDMT 183

Query: 57  -THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
              +    T    +D   KP  L  S + + +    A    ++ F   +R  +     H 
Sbjct: 184 NPPLNEDGTIDWSRDFFGKPASLTVSGQLNAENFAMA-FGDVYTFGPTFRAEDSNTKRHA 242

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       M     +++         +        N  +      + E  
Sbjct: 243 AEFWMVEPEMAFADLNDDMDLAQAMLQS----VITTVLEQCADELNMLNRFVDKGLLERL 298

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
              A  D           D   +  QA     +  +   W           +        
Sbjct: 299 RHVATSDFARVTY----TDAIAILEQAVADDHKFEYPVKWGVDLQTEHERYLTEQH-FGK 353

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            T +  YPA   A       D +     +     I       +  + +E   R   E+  
Sbjct: 354 PTFVTDYPAGIKAFYMRLNDDGKTVAAVDCLVPGIGEIIGGSQREERLEVLERRIDEL-- 411

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +  E Y    D         + +G  +GF+RLVM +TG +NI +V+  P +
Sbjct: 412 --GMDKEQYRYYLDLRR--YGTVEHAGFGLGFERLVMYLTGVDNIRDVLPHPRT 461


>gi|221195832|ref|ZP_03568885.1| asparaginyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221184306|gb|EEE16700.1| asparaginyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 467

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 106/358 (29%), Gaps = 40/358 (11%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R++   ++ ++F +  F+ +++  +  S       +   +T  
Sbjct: 122 QQHLRPRTNLFRAVFRVRSVAAYAIHKFFQDQGFVYVNTPIITTSDAEGAGEMFQVTTLD 181

Query: 67  IIQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
           +               D      +L  S +   +    A    ++ F   +R        
Sbjct: 182 LENIPRTDAGKVDYTQDFFDTSAHLTVSGQLQAENFAMA-FGDVYTFGPTFRAENSNTRR 240

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A     Q M     +++                     ++     + E
Sbjct: 241 HAAEFWMIEPEMAFCDLAQDMDIAEAMLQYVISYV----LEHCADELEMLNKFVDKGLLE 296

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                A  +           D   +  +A   G +  +   W           +      
Sbjct: 297 RLHHVATSEFARVSY----TDAISILEEAISQGEKFNYPVKWGIDLQTEHERYLTEKHFK 352

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--K 290
                +  YPA   A       D +     +     I       E++   ++  R +  +
Sbjct: 353 KPV-FVTDYPAEIKAFYMRTNDDGKTVAAADCLVPGI------GEIIGGSQREERLDVLE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   +  E Y    D           SG  +GF+RLVM +TG +NI +VI  P +
Sbjct: 406 QRIKDLDMDPEQYKYYLDLRR--YGSCTHSGFGLGFERLVMYLTGVDNIRDVIPHPRT 461


>gi|282163375|ref|YP_003355760.1| aspartyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155689|dbj|BAI60777.1| aspartyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 434

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 116/366 (31%), Gaps = 59/366 (16%)

Query: 3   QIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
            +P  P        D     R               R  +  ++R+Y      +EI S  
Sbjct: 104 PLPLDPTGKVPAELDTRLDSRFMDLRSPEVTAVFYVRANMIKAIRDYLSSQGCLEIASPK 163

Query: 49  LQYSP--GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
           +  +   G         TEL    +  +  +L  SP+   + ++A G ++++     +R 
Sbjct: 164 IVATATEGG--------TELFPISYFEREAFLNQSPQLYKQMMMAGGMDRVYEIGPIFRA 215

Query: 107 GEQGCL-HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
            E     H  E T ++   +  + E  M+   N I  A     +                
Sbjct: 216 EEHATRKHLNEATSIDVELSFATDEDAMRLLENTIAYAYAYVKEHC-------------- 261

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
                 +A  +  N+DL        +         A++       D  + D  S      
Sbjct: 262 ------QAQLKVLNVDLQVPKTPFRRLCYRDAIEIAKKD--PECADIEYGDDLSTQAEHA 313

Query: 226 IEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           +     I     +  +P    +        DP   K F+L    +EL +         E 
Sbjct: 314 V--GQAIGEHYFIVNWPTNIRAFYTQPCENDPSICKAFDLMHPRMELSSGAQREYRYAEL 371

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             + E+     K +  E++   + +L      MP  +G  +G +RL+  +   NNI E +
Sbjct: 372 VKKMEE-----KGLSPESF---KFYLDSFRYGMPPHAGWGLGAERLLQTMLNLNNIREAV 423

Query: 344 WTPFSQ 349
             P  +
Sbjct: 424 LFPRDR 429


>gi|237874247|ref|NP_001153873.1| aspartyl-tRNA synthetase [Acyrthosiphon pisum]
          Length = 537

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+      F+EI +  +  +  +E    
Sbjct: 211 NQDTRLDNRVIDLRTPANQAIFRLEAGVCKIFRDLLTAKGFVEIHTPKMI-NAASEGGAN 269

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +A   +++F     +R  +     H  EF  
Sbjct: 270 VFTISYFKGSA-----YLAQSPQLYKQMAIAGDFDRVFTIGAVFRAEDSNTYRHLTEFVG 324

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   + D +  +        +  +  +                        
Sbjct: 325 LDLEMAFKYHYHEVVDVIGSLFTNIFKGLRDNYQSEIKTICEQYP--------------- 369

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    LD P + +        ++AG+ +  +D  S    ++L   ++     +   ILD
Sbjct: 370 VEPFKFLDPPLKLEFPTAVNMLREAGVEMGDEDDLSTPNEKLLGRLVKAKYDTD-FYILD 428

Query: 240 RYPAPESALANIYPADPRFTKR-FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P        +   D +     ++++    E+ +    + D      R +    + +KI
Sbjct: 429 KFPLAIRPFYTMPDPDSKVASNSYDMFMRGEEILSGAQRIHDFDYLIERAKHHQVDIEKI 488

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                     ++       P  +G  +G +R+VML  G +NI +V   P  
Sbjct: 489 --------AAYIDAFRYGCPPHAGGGIGLERVVMLYLGLDNIRKVSMFPRD 531


>gi|195582903|ref|XP_002081265.1| GD10925 [Drosophila simulans]
 gi|194193274|gb|EDX06850.1| GD10925 [Drosophila simulans]
          Length = 531

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 116/355 (32%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   E  F EI +  +  +  +E    
Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAA-SEGGAN 263

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K++     +R  +     H  EF  
Sbjct: 264 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVG 318

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                        +       +Y    E+  +   
Sbjct: 319 LDLEMAFKYHYHEVLHT---------------IGNTFTSIFKGLRDKYAKEIESVGQQYK 363

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +D    L+ P            ++AG+    ++  S    ++L   ++     +   ILD
Sbjct: 364 VDAFKFLEPPLILQFADGVAMLREAGVETGDEEDLSTPNEKLLGRLVKAKYDTD-FYILD 422

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P +P ++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 423 KFPLAIRPFYTMPDPNNPVYSNSYDMFMRGEEILSGAQRIHDP--------EYLIERAKH 474

Query: 299 YNETYPIDED----FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 475 ----HGIDTSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 525


>gi|26987948|ref|NP_743373.1| aspartyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|148546485|ref|YP_001266587.1| aspartyl-tRNA synthetase [Pseudomonas putida F1]
 gi|37999411|sp|Q88NJ4|SYD_PSEPK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225378|sp|A5VZU3|SYD_PSEP1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24982660|gb|AAN66837.1|AE016312_8 aspartyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|148510543|gb|ABQ77403.1| aspartate--tRNA(Asn) ligase [Pseudomonas putida F1]
 gi|313497564|gb|ADR58930.1| AspS [Pseudomonas putida BIRD-1]
          Length = 591

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 77/446 (17%), Positives = 129/446 (28%), Gaps = 115/446 (25%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I SS+R +  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMADKLRLRSRITSSIRRFLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP----- 115
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QP     
Sbjct: 182 PSRTHAGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 116 ---------------------------------EFTMLEWYRAHESYEQLMKDCMNIIRC 142
                                            EF  + +  A   Y     D    +  
Sbjct: 236 DIETSFLDESEIMGLTESMIRKLFKEVLDLEFGEFPHMTFEEAMRRYGSDKPDLRIPLEL 295

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYIT-------------VAEAFARYANIDLGTTLDNP 189
                  K   F+            +T               + + ++  I     L   
Sbjct: 296 VDVADQLKDVDFKVFAGPANDPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGAKGLAYI 355

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--------------------------- 222
              +R       Q   ++   +   ++I  R+                            
Sbjct: 356 KVNERAKGVEGLQSPIVKNIPEANLNNILDRVGAVDGDIVFFGADKFKVVSEALGALRIR 415

Query: 223 -IEKIEPNLGINCCTILDRYPAPE-----SALANIYPADPRFTKRFELYAC--------N 268
                E          +  +P  E     S  A  +P         EL A          
Sbjct: 416 LGHDFELLTCEWAPMWVVDFPMFEENEDGSFTALHHPFTAPKCTPEELEANPATALSRAY 475

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAM 324
             + N   EL     + HR E +    + +  E    +E F   L  L    P   G+A 
Sbjct: 476 DMVLNG-TELGGGSIRIHRKEMQQAVFRLLGIEAEEQEEKFGFLLDALKFGAPPHGGLAF 534

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQS 350
           G DRLVML+TGA +I EVI  P +QS
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQS 560


>gi|291528245|emb|CBK93831.1| aspartyl-tRNA synthetase, archaeal type [Eubacterium rectale
           M104/1]
          Length = 443

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 108/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  I    R++   N F EI +  L   S     ++          ++ 
Sbjct: 135 RNPRERATFRIQEGITRGFRDFLYNNGFTEIHTPKLGAKSAEGGANL-------FKLEYF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P  LQ SP+F  +  +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 188 HRPAILQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            + +             +                   T          I L      P  
Sbjct: 247 DIMEMETGFLQYTMELLK-------------------TSYAKELELLKIKLPDVASIPRV 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                    A++   +  +          ++ +  +   G +    +  YP+ +     +
Sbjct: 288 RFDEAKQRVAEKYNRQFRNPFDLEPEEEVLIGQYFKEEYGSD-FVFVTHYPSKKRPFYAM 346

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               D  +T  F+L    +E+      + D  +   +       K+ +  E     E +L
Sbjct: 347 DDPADETYTLSFDLLFRGLEITTGGQRIHDYNKLMEKI-----AKRGMETEGM---ESYL 398

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     MP   G+ +G +RL M + G +N+ E    P  
Sbjct: 399 SAFKYGMPPHGGLGIGLERLTMQLIGEDNVREATLFPRD 437


>gi|254282728|ref|ZP_04957696.1| lysyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678931|gb|EED35280.1| lysyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 284

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 74/312 (23%), Positives = 128/312 (41%), Gaps = 31/312 (9%)

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           +E+++  L  +   +  +                 +LQTSPE++ K+LLAAG   IF   
Sbjct: 1   MEVETPLLASAGVTDPALEPIRVPC-----ADGERFLQTSPEYAMKRLLAAGSGDIFQIC 55

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            A+R  E G  H PE+T+LEWYR    + QL+++   ++                +   P
Sbjct: 56  KAFRAAEVGRRHNPEYTLLEWYRTGIDHYQLLREVAELL----------------LTLLP 99

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
               +    A  F     I       NP   +  +L   A++    V    +       +
Sbjct: 100 HQRWQVWPYATLFEELLAI-------NPFDAEVAVLETIAREQCGEVPPALSRDGWLDLL 152

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF--TKRFELYACNIELCNACDELL 279
           +   IEP +       +  YP  +++LA I P         RFE Y   +EL N   E  
Sbjct: 153 MSHCIEPAISTWGIVFVVDYPPSQASLARILPRGECCATAARFECYVDGVELANGYWEET 212

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           D +E + RF+ +             +D  F+A + + +P  +G+A+G DRL+    G  N
Sbjct: 213 DAVELKRRFDDDNARLTAAGQPARCLDPRFMAAMASGLPDCAGVALGLDRLLACQLGTRN 272

Query: 339 INEVIWTPFSQS 350
           ++ ++   + +S
Sbjct: 273 LSGILAFDWHRS 284


>gi|55378426|ref|YP_136276.1| aspartyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|62287529|sp|Q5V1N2|SYD_HALMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|55231151|gb|AAV46570.1| aspartyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 434

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 113/335 (33%), Gaps = 40/335 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     R  +  S+RE F E    EI++  +  + G E       TEL    +  +  ++
Sbjct: 131 KAIFEIRAEVLRSVREAFRELNCTEINTPKIVAT-GTEGG-----TELFPITYFGQEAFM 184

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   + ++ +G E++F     +R  E     H  E T +++  A   + + M  C 
Sbjct: 185 NQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFYDHTEAMDACE 244

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           ++++ A E   +                      +       ++        D P     
Sbjct: 245 HVVQSAYEGVAENC--------------------QDQLEALGLEDEFAAPEGDFPRLTYE 284

Query: 198 YLQAQ-QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
               +  A   +     W D  S      +   +G      +  +P+         +  D
Sbjct: 285 EALDKINATGELDEPLVWGDDLSTEAEHVLGQEVGE--HYFITDWPSEIKPFYIKDHDDD 342

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              +  F++   ++EL +              FE++      +  E +     +      
Sbjct: 343 EEVSTGFDMMHPSMELVSGGQREHRFDHLVEGFEQQ-----GLDPEAFEY---YTKMFKY 394

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            MP  +G  +G +RL+M + G  NI E +  P  +
Sbjct: 395 GMPPHAGWGLGGERLIMTMLGLENIREAVLFPRDR 429


>gi|163791072|ref|ZP_02185492.1| asparaginyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873628|gb|EDP67712.1| asparaginyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 432

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/352 (17%), Positives = 109/352 (30%), Gaps = 47/352 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   +  RN I  +   +F E  FI++D   L  S   ++      
Sbjct: 115 MDHRHLWLRSS--KQHAIMQIRNEIIRATYNFFNEEGFIKVDPPILTASAAEDS------ 166

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E 
Sbjct: 167 TELFHTQYFDQEAFLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEP 225

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +EQ ++     +    +                      +   +        D 
Sbjct: 226 EMAFMDHEQSLEVQEKYVAYIIQSV--------------------LDNCDDALDVVGRDK 265

Query: 183 GTTLDNPDQPDRHLLYLQAQQA-GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                  + P   + Y  A +        D TW D F       I      +    +  Y
Sbjct: 266 ELLKKYTELPYPRISYDDAVKLLNDNGFDDITWGDDFGSPHETFIATQY--DKPVFILNY 323

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY- 299
           P    +     +P         +L A          E++   E+   F+   Q  K+   
Sbjct: 324 PKAIKAFYMKPHPDRDDVVLCADLIAP-----EGYGEVIGGSEREVDFDALSQRIKEFGL 378

Query: 300 ---NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +  + +D   L         SG  +G +R V  + G  +I E I  P  
Sbjct: 379 TEEDYAWYMD---LRK-YGSVPHSGFGLGLERTVTWICGTEHIRESIPFPRL 426


>gi|296328765|ref|ZP_06871279.1| asparagine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154100|gb|EFG94904.1| asparagine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 461

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 108/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  +L ++F EN F+ + +  +  S       +  F    +
Sbjct: 120 AHLRARTNTFSAVFRVRSVLAYALHKFFQENNFVYVHTPIITGSDAEGAGEM--FRITTL 177

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +             K  +     L  S +    +   A    I+ F   +R       
Sbjct: 178 DLNKVPKKENGEVDFSKDFFGKSTNLTVSGQL-NGETYCAAFRNIYTFGPTFRAEYSNTA 236

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+    +++   +                F+      + 
Sbjct: 237 RHASEFWMIEPEIAFGDLNANMELAEAMVKYIIKYV----MDNCPEEMEFFNSFIEKGLF 292

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D G                  +++G +      W           +     
Sbjct: 293 DKLNNVLNNDFGRVTYTE-------AIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYF 345

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +  +  +L A  I       +  D  E   +  KE
Sbjct: 346 KKPV-FVTDYPKDIKAFYMKLNEDNKTVRAMDLLAPGIGEIIGGSQREDNYELLTKRMKE 404

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  K++ Y       E +L          SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 405 LGLKEEDY-------EFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRT 455


>gi|225387011|ref|ZP_03756775.1| hypothetical protein CLOSTASPAR_00761 [Clostridium asparagiforme
           DSM 15981]
 gi|225047023|gb|EEG57269.1| hypothetical protein CLOSTASPAR_00761 [Clostridium asparagiforme
           DSM 15981]
          Length = 463

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 105/359 (29%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++I  ++ +YF +  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFQAVFRVRSLIAYAIHQYFQDRGFVYVHTPLITGSDCEGAGEM--FQVTTMD 180

Query: 69  QDH----------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +             +  +     L  S + + +    A    ++ F   +R        
Sbjct: 181 LNDIPKTEDGKVDFSQDFFGKPTNLTVSGQLNVETYAMA-FRNVYTFGPTFRAENSNTPR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +  M     +++                  N F++     + +
Sbjct: 240 HAAEFWMIEPEMAFADLDDNMCLAEGLLKYVIRYV----LENAPAEMNFFNQFVDKGLLD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                   + G                  ++   +  +  +W           +   +  
Sbjct: 296 RLKNVLESEFGHITYTD-------AVKILEEHNDQFDYKVSWGCDLQTEHERYLTEQVFK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        D      R ++ 
Sbjct: 349 KPV-FVTDYPKEIKAFYMKMNPDNKTVAAVDCLVPGIGEIIGGSQREDDYDTLVARMDEL 407

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +K+         D DF   L      + +G  +GF+R VM +TG  NI +VI  P +
Sbjct: 408 GLKKE---------DYDFYLDLRKYGSNRHAGFGLGFERCVMYLTGMTNIRDVIPFPRT 457


>gi|170723163|ref|YP_001750851.1| aspartyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229470564|sp|B1JD74|SYD_PSEPW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169761166|gb|ACA74482.1| aspartyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 591

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 78/446 (17%), Positives = 129/446 (28%), Gaps = 115/446 (25%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I SS+R +  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMADKLRLRSRITSSIRRFLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP----- 115
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QP     
Sbjct: 182 PSRTHAGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 116 ---------------------------------EFTMLEWYRAHESYEQLMKDCMNIIRC 142
                                            EF  + +  A   Y     D  N +  
Sbjct: 236 DIETSFLDESEIMGLTESMIRKLFKEVLDLEFGEFPHMTFEEAMRRYGSDKPDLRNPLEL 295

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYIT-------------VAEAFARYANIDLGTTLDNP 189
                  K   F+            +T               + + ++  I     L   
Sbjct: 296 VDVADQLKDVDFKVFAGPANDPKCRVTALRLPGGASMPRSKIDEYTKFVGIYGARGLAYI 355

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--------------------------- 222
              +R       Q   ++   +   + I  R+                            
Sbjct: 356 KVNERAKGVEGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGADKFKVVSEALGALRIR 415

Query: 223 -IEKIEPNLGINCCTILDRYPAPE-----SALANIYPADPRFTKRFELYAC--------N 268
                E          +  +P  E     S  A  +P         EL A          
Sbjct: 416 LGHDFELLTCEWAPMWVVDFPMFEENEDGSFTALHHPFTAPKCTPEELEANPATALSRAY 475

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAM 324
             + N   EL     + HR E +    + +  E    +E F   L  L    P   G+A 
Sbjct: 476 DMVLNG-TELGGGSIRIHRKEMQQAVFRLLGIEAAEQEEKFGFLLDALKFGAPPHGGLAF 534

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQS 350
           G DRLVML+TGA +I EVI  P +QS
Sbjct: 535 GLDRLVMLMTGAQSIREVIAFPKTQS 560


>gi|56420706|ref|YP_148024.1| asparaginyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|56380548|dbj|BAD76456.1| asparaginyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 431

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 107/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F+++D+  L   +P         
Sbjct: 115 MDHRHLWLRSR--RQHAIMKIRNEIIRATYEFFNDRGFVKVDAPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 166 TTELFHTKYFDEDAYLSQSGQLYMEAAAMA-LGKVFSFGPTFRAEKSKTRRHLIEFWMVE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  ++     +    +   ++                              D
Sbjct: 225 PEMAFYEFEDNLRLQEEYVSYLVQSVLERCRLELGR--------------------LGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +           R       +    +   D  W D F       I  +   +    +  Y
Sbjct: 265 VSKLELVKPPFPRLTYDEAIKLLHEKGLTDIEWGDDFGAPHETAIAES--FDKPVFITHY 322

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P  P      +L A     E+    + + D    + R E+       +
Sbjct: 323 PTSLKPFYMQPDPNRPDVVLCADLIAPEGYGEIIGGSERIHDYELLKRRLEE-----HHL 377

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y   E +L          SG  +G +R V  + G  ++ E I  P  
Sbjct: 378 PLEAY---EWYLDLRKYGSVPHSGFGLGLERTVAWICGVEHVRETIPFPRL 425


>gi|257784175|ref|YP_003179392.1| asparaginyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472682|gb|ACV50801.1| asparaginyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 467

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 107/358 (29%), Gaps = 40/358 (11%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R++   ++ ++F +  F+ +++  +  S       +  F    
Sbjct: 122 QQHLRPRTNMFRAVFRIRSVAAFAIHQFFQDRGFVYVNTPIITASDAEGAGEM--FRVTT 179

Query: 67  IIQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
           +  +             K  +     L  S +   +    A    ++ F   +R      
Sbjct: 180 LDLNNVPRTEKGDVDYSKDFFGQSSHLTVSGQLQAENFAMA-FGDVYTFGPTFRAENSNT 238

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF M+E   A     Q M     ++R                     ++     +
Sbjct: 239 RRHAAEFWMIEPEMAFCDLAQDMDVAEEMLRYVIAYV----LEHCPDELEMLNKFVDKGL 294

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            E     AN    +        +   +  +A +AG +  +   W           +    
Sbjct: 295 LERLNHVAN----SQFSRVSYTEAIEILQEAVKAGQKFEYPVEWGIDLQTEHERYLTEQH 350

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +  YPA   A       D +     +     I       +  D +E     ++
Sbjct: 351 -FGKPIFVTDYPAAIKAFYMRLNDDGKTVAAADCLVPGIGEIIGGSQREDRLELLE--KR 407

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++      +  Y +D             SG  +GF+RLVM +TG +NI +VI  P +
Sbjct: 408 IVELGMNPDDYKYYLDLR----RYGSCTHSGFGLGFERLVMYLTGVDNIRDVIPHPRT 461


>gi|242006049|ref|XP_002423869.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212507103|gb|EEB11131.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 532

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 113/333 (33%), Gaps = 33/333 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +        +    R+      F+EI +  +  +  +E     F+             YL
Sbjct: 224 QAIFKLEAGVCKLFRDILTSKGFVEIHTPKIISAA-SEGGANVFTVSYFKTSA-----YL 277

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   +  +AA  +K+F     +R  +     H  EF  L+   A + +   + D +
Sbjct: 278 AQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVGLDLEMAFKFHYHEVVDVI 337

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
                   +  QK++  +                E   +   ++    L  P + +    
Sbjct: 338 ADTFTDIFINLQKLYHQE---------------IEIIRQQYAVEPFKFLVPPLRLEFKDA 382

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
                +AG+ +  +D  S    ++L   ++     +   ILD+YP           P +P
Sbjct: 383 ITLLGEAGVTLGEEDDLSTPDEKLLGRIVKAKYDTD-FYILDKYPLSVRPFYTMPDPNNP 441

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
           + +  ++++    E+ +    + D      R          I  +     + ++      
Sbjct: 442 KASNSYDMFMRGEEILSGAQRIHDAEFLCER-----ALHHGIDLQKI---KAYIDAFKYG 493

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P  +G  +G +R+VML  G +NI +    P  
Sbjct: 494 CPPHAGGGIGLERVVMLYLGLDNIRKTSMFPRD 526


>gi|160935859|ref|ZP_02083233.1| hypothetical protein CLOBOL_00752 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441101|gb|EDP18818.1| hypothetical protein CLOBOL_00752 [Clostridium bolteae ATCC
           BAA-613]
          Length = 463

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 106/359 (29%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+++  ++ +YF E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRARTNTFQAVFRVRSLVAYAIHQYFQERDFVYVHTPLITGSDCEGAGEM--FQVTTMD 180

Query: 69  QD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +             +  +     L  S + + +    A    ++ F   +R        
Sbjct: 181 LNNIPKTEEGKVDFSQDFFGKATNLTVSGQLNAETYAMA-FRNVYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +  M     +++                  N F++     + +
Sbjct: 240 HAAEFWMIEPEMAFADLDDDMCLAEGMLKYIIRFV----LEHAPEEMNFFNQFVDKGLLD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N + G                  ++      +  +W           +   +  
Sbjct: 296 RLHNVLNSEFGRVTYTE-------AVKILEEHNDEFDYKVSWGCDLQTEHERYLTEQVFK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        D      R ++ 
Sbjct: 349 KPV-FVTDYPKEIKAFYMKMNPDNKTVAAVDCLVPGIGEIIGGSQREDDYGRLVARMDEL 407

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +K+         D DF   L      + +G  +GF+R VM +TG +NI +VI  P +
Sbjct: 408 GLKKE---------DYDFYLDLRKYGSTRHAGFGLGFERCVMYLTGMSNIRDVIPFPRT 457


>gi|258566145|ref|XP_002583817.1| hypothetical protein UREG_06784 [Uncinocarpus reesii 1704]
 gi|237907518|gb|EEP81919.1| hypothetical protein UREG_06784 [Uncinocarpus reesii 1704]
          Length = 938

 Score =  162 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 118/343 (34%), Gaps = 30/343 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I S  R     N FIEI +  LQ S   E+    F+      ++  +P +
Sbjct: 268 SQSIFRIQSAISSYFRSTLDANGFIEIHTPKLQGSA-TESGASVFNV-----NYFSRPAF 321

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+     E +     D 
Sbjct: 322 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDMEMVIEEHYHESLDV 381

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +  A   A       +          E +   +        +    L+         
Sbjct: 382 LDQVIKAIFTAIYDRHRREVQIIKHQFPSEDLLWLDQTPIITFSEGIKMLNESGWRTED- 440

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                   G   +  +         L E I+     +   I+D++PA          P D
Sbjct: 441 --------GKEFSDQEDIGTRDEIRLGELIKEKYHTD-YYIMDKFPAAARPFYAMPDPDD 491

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            RFT  ++++    E+ +    + DP+    R       KK   +      E+++     
Sbjct: 492 SRFTNSYDIFVRGQEIVSGGQRIHDPVMLEER------MKKMGIDPASM--EEYMEGFRW 543

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT---PFSQSNQEE 354
             P  +G  +G +R++ML+    NI         P S   Q++
Sbjct: 544 GAPPHAGAGIGLERMLMLILKLGNIRLASLFHRDPKSFPAQDQ 586


>gi|261417990|ref|YP_003251672.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767197|ref|YP_004132698.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374447|gb|ACX77190.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112063|gb|ADU94555.1| asparaginyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 431

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 107/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F+++D+  L   +P         
Sbjct: 115 MDHRHLWLRSR--RQHAIMKIRNEIIRATYEFFNDRGFVKVDAPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 166 TTELFHTKYFDEDAYLSQSGQLYMEAAAMA-LGKVFSFGPTFRAEKSKTRRHLIEFWMVE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  ++     +    +   ++                              D
Sbjct: 225 PEMAFYEFEDNLRLQEEYVSYLVQSVLERCRLELGR--------------------LGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +           R       +    +   D  W D F       I  +   +    +  Y
Sbjct: 265 VSKLELVKPPFPRLTYDEAIKLLHEKGLTDIEWGDDFGAPHETAIAES--FDKPVFITHY 322

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P  P      +L A     E+    + + D    + R E+       +
Sbjct: 323 PTSLKPFYMQPDPNRPDVVLCADLIAPEGYGEIIGGSERIHDYELLKRRLEE-----HHL 377

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y   E +L          SG  +G +R V  + G  ++ E I  P  
Sbjct: 378 PLEAY---EWYLDLRKYGSVPHSGFGLGLERTVAWICGVEHVRETIPFPRL 425


>gi|39575142|emb|CAE78983.1| asparaginyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 514

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 107/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F E  F+ +++  +  S       +  F    +
Sbjct: 173 AHLRPRTNTFSAVFRVRSVLAYAIHKFFNEQNFVYVNTPIITGSDAEGAGEM--FRVTTL 230

Query: 68  IQDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             D             +  +     L  S +    +   A    I+ F   +R       
Sbjct: 231 KLDKPPRKEDGSIDASQDFFGKETNLTVSGQL-NGETFCAAFRNIYTFGPTFRAENSNTS 289

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+   ++I+                    F++     + 
Sbjct: 290 RHAAEFWMIEPEIAFADLTANMELAEDMIKYIIRYV----MEQCPEEMEFFNQFVEKGLF 345

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N + G                   + G +  +   W           +     
Sbjct: 346 DKLNNVLNNNFGRVTYTE-------AIDILLKCGKKFEYPVQWGIDMQSEHERYLAEEHF 398

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +  +  +L A  I       +  D +E+     K+
Sbjct: 399 KKPV-FVTDYPKDIKAFYMKLNEDGKTVRAMDLLAPGIGEIIGGSQREDNLEKLESRMKQ 457

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     ++ E Y    D           +G  +GF+R++M VTG  NI +VI  P +
Sbjct: 458 V----GLHPEEYSFYTDLRR--YGTFPHAGYGLGFERMLMYVTGMGNIRDVIPFPRT 508


>gi|304314436|ref|YP_003849583.1| aspartyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587895|gb|ADL58270.1| aspartyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 437

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 61/352 (17%), Positives = 122/352 (34%), Gaps = 57/352 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIR 60
           D     R               ++ +  S+R +  EN F+EI++  L  S   G      
Sbjct: 123 DTRLDARFLDLRKPSVSAIFKIKSRMLHSVRVFLEENGFLEINTPKLVASATEGG----- 177

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTM 119
              TEL    +  +  +L  SP+   + +++ G ++++  A  +R  E     H  E   
Sbjct: 178 ---TELFPITYFEREAFLGQSPQLYKQMMMSTGLDRVYEIAPIFRAEEHDTLRHLNEVIS 234

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++   +   +E +MK    ++    E  N+                              
Sbjct: 235 IDIEASFVDHEDVMKILERLVVRVIEDVNEHCTDALET---------------------- 272

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
             LG TL+ P+ P   L Y +A +            +   R   + +     ++    + 
Sbjct: 273 --LGRTLEVPETPFERLEYDEAVELVNSRGVPMKHGEDLPRAAEKALGE--VMDGYYFIT 328

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
            +P             DP  +  F+L   ++E+ +    +        +  ++      +
Sbjct: 329 SWPTAIKPFYVMPDENDPERSYAFDLMYRDLEISSGAMRVHQHDLLVEKISRQ-----GL 383

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +++   E +LA     MP  +G  +G +R  M +TG NNI E +  P  +
Sbjct: 384 NPDSF---ESYLAAFEYGMPPHAGWGLGAERFNMTLTGVNNIRETVLFPRDR 432


>gi|257452823|ref|ZP_05618122.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 463

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 108/358 (30%), Gaps = 47/358 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+    ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRARTNTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEM--FRITTLD 180

Query: 69  QDH----------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
            ++           +K  +     L  S +    +   A    I+ F   +R        
Sbjct: 181 LNNVPKNEDGSINFQKDFFGKSTNLTVSGQL-NGETYCAAFRNIYTFGPTFRAEYSNTAR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M     +++       +          N F++     + +
Sbjct: 240 HASEFWMIEPEMAFADLEVNMDIAEKMVKYIIRYVMETCPE----EMNFFNQFIEKGLFD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N D G                  +++G +  +   W           +      
Sbjct: 296 KLNNVLNNDFGRLTYTE-------AIDILEKSGKKFEYPVKWGIDLQSEHERYLAEEHFK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               ++  YP    A       D +  +  +L A  I       +  D +E       E+
Sbjct: 349 KPVFLV-DYPKDIKAFYMKLNEDGKTVRAMDLLAPQIGEIIGGSQREDNLEILENRMNEL 407

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +  E    D  F   L        SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 408 ----GMDKE----DYSFYLDLRKYGSFPHSGYGLGFERMIMYLTGMANIRDVIPFPRT 457


>gi|193083965|gb|ACF09640.1| asparaginyl-tRNA synthetase [uncultured marine crenarchaeote
           AD1000-56-E4]
          Length = 436

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 65/343 (18%), Positives = 117/343 (34%), Gaps = 58/343 (16%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQD 70
            RR   +     R+ +  S+R+YF ++ F EI++  +  +   G           L    
Sbjct: 136 LRRNTLQQVFKARSNVLKSIRQYFYDHNFTEINTPKMIATATEGGAA--------LFPIF 187

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +  K  +L  SP+   K+ L    EK+F  A  +R        H  E   +++  A+  Y
Sbjct: 188 YYNKEAFLAQSPQLY-KEQLTMSFEKVFEIAPIFRAEPSRTNRHLSEAISIDFEEAYVDY 246

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             +M     II+             +    N   E     +++   +Y   DL   +   
Sbjct: 247 NDVMSRIGQIIKQTILTM------QEFSKDNDDVEFTIPEISDTIPQYTYSDLLEKIRAT 300

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESAL 248
                                   W D      + KI    GI     +  +P  P+   
Sbjct: 301 -------------------GAKSQWGDDLYPAQLNKI----GITGFYFIKDWPVGPKPFY 337

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID-- 306
             +   +P+ ++ F+L   ++EL +    +    E   R       K K       ID  
Sbjct: 338 VKVSNDNPKISESFDLMYGDLELSSGSTRIAKKSELEDR------MKNKG----MKIDTF 387

Query: 307 -EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                     +P  +G  +G +RL+M +TG +NI +  + P  
Sbjct: 388 GYHLGVFDYGVPPHAGCGIGLERLMMALTGIDNIRDTTFYPRD 430


>gi|327403764|ref|YP_004344602.1| asparaginyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327319272|gb|AEA43764.1| Asparaginyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 483

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 111/377 (29%), Gaps = 37/377 (9%)

Query: 3   QIPSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
             P +    +     H R R          R+ +  ++ ++F +  F  I +  +  S  
Sbjct: 107 MQPKKHSLEYLREQAHLRFRTNLFGAVFRVRHAVSYAIHQFFNDQGFYYIHTPIITGSDA 166

Query: 54  GNETHI---------RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +              E    ++      K + L  S +   +    A   +I+ F
Sbjct: 167 EGAGEMFRVTNLDAKNPPLNEDGSVNYTEDFFGKAVNLTVSGQLEGELAALA-LGQIYTF 225

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A       M    N+++   +   +          
Sbjct: 226 GPTFRAENSNTSRHLAEFWMIEPEVAFNDIHDNMDLAENMLKYICDYVMKNCADDLKFLN 285

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPD------QPDRHLLYLQAQQAGIRVAHDDT 213
               + +             I+    +   D           +L         +  +D  
Sbjct: 286 EREVQEQQSKPQNERNELGLIERLQFVTTNDFKRITYTEAIEVLMNSNHYKKKKFKYDVN 345

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           W           +          I+  YPA  S  A    A+       E  A    L  
Sbjct: 346 WGTDLQSEHERYLVEK-EFKRPVIITDYPA--SFKAFYMRANDGCEPGKETVAAMDILFP 402

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPID-EDFLACLT-EMPQSSGIAMGFDRLVM 331
              E++   ++  R E  + +KK      +  D   +L          +G  +GF+R+VM
Sbjct: 403 GIGEMVGGSQREERLE--VLQKKCADFGIHEEDLWWYLDTRRFGSVPHAGFGLGFERMVM 460

Query: 332 LVTGANNINEVIWTPFS 348
            VTG  NI +VI  P +
Sbjct: 461 FVTGMTNIRDVIPFPRT 477


>gi|239827463|ref|YP_002950087.1| asparaginyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239807756|gb|ACS24821.1| asparaginyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 430

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 107/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN +  +  E+F  + F+++D   L   +P         
Sbjct: 114 MDHRHLWLRSR--RQHAIMKIRNEVIRATYEFFNNHGFVKVDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  +K     +    +   +                      +   +    D
Sbjct: 224 PEMAFYEFEDNLKLQEEYVSHIVQSVLKNC--------------------QLELKTLGRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       Q    +  +D  W D F       I  +   +    +  Y
Sbjct: 264 TTKLELVKPPFPRITYDEAIQLLHDKGFNDIQWGDDFGAPHETTIAES--FDKPVFITHY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           P  P      +L A          E++       R       K+++  
Sbjct: 322 PTTLKPFYMQPDPNRPEVVLCADLIAP-----EGYGEIIGGS---ERIHDYELLKQRLEE 373

Query: 301 ETYPID--EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P+D  + +L          SG  +G +R +  + G +++ E I  P  
Sbjct: 374 HHLPLDAYKWYLELRQYGSVPHSGFGLGLERTIAWICGVDHVRETIPFPRL 424


>gi|194883504|ref|XP_001975841.1| GG20342 [Drosophila erecta]
 gi|190659028|gb|EDV56241.1| GG20342 [Drosophila erecta]
          Length = 531

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 114/355 (32%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   E  F EI +  +  +  +E    
Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAA-SEGGAN 263

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K++     +R  +     H  EF  
Sbjct: 264 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVG 318

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                +Y    E+  +   
Sbjct: 319 LDLEMAFKYHYHEVLHT---------------IGNTFTAIFKGLRDKYAKEIESVGQQFK 363

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +D    L+ P            ++AG+    ++  S    ++L   ++     +   ILD
Sbjct: 364 VDAFKFLEPPLILQFADGVAMLREAGVETGDEEDLSTPNEKLLGRLVKAKYDTD-FYILD 422

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P +P ++  ++++    E+ +    + D         + + E+ K 
Sbjct: 423 KFPLAIRPFYTMPDPNNPVYSNSYDMFMRGEEILSGAQRIHDA--------EYLMERAKH 474

Query: 299 YNETYPIDED----FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 475 ----HGIDTSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 525


>gi|257466811|ref|ZP_05631122.1| asparaginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 463

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 108/358 (30%), Gaps = 47/358 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+    ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRARTNTFSAVFRVRSAAAYAIHKFFQEQNFVYVHTPIITSSDAEGAGEM--FRITTLD 180

Query: 69  QDH----------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
            ++           +K  +     L  S +    +   A    I+ F   +R        
Sbjct: 181 LNNVPKNEDGSINFQKDFFGKSTNLTVSGQL-NGETYCAAFRNIYTFGPTFRAEYSNTAR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M     +++       +          N F++     + +
Sbjct: 240 HASEFWMIEPEMAFADLEVNMDIAEKMVKYIIRYVMETCPE----EMNFFNQFIEKGLFD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N D G                  +++G +  +   W           +      
Sbjct: 296 KLNNVLNNDFGRLTYTE-------AIDILEKSGKKFEYPVKWGIDLQSEHERYLAEEHFK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               ++  YP    A       D +  +  +L A  I       +  D +E       E+
Sbjct: 349 KPVFLV-DYPKDIKAFYMKLNEDGKTVRAMDLLAPQIGEIIGGSQREDNLEILETRMNEL 407

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +  E    D  F   L        SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 408 ----GMDKE----DYSFYLDLRKYGSFPHSGYGLGFERMIMYLTGMANIRDVIPFPRT 457


>gi|62822481|gb|AAY15029.1| unknown [Homo sapiens]
          Length = 313

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 111/334 (33%), Gaps = 33/334 (9%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I    RE  +   F+EI +  +  +  +E     F+      +      Y
Sbjct: 4   SQAVFRLQSGICHLFRETLINKGFVEIQTPKIISAA-SEGGANVFTVSYFKNNA-----Y 57

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  + A  EK+F     +R  +     H  EF  L+   A   +   + + 
Sbjct: 58  LAQSPQLYKQMCICADFEKVFSIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVMEE 117

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           +           Q+ F  +    N     E     E   R                +   
Sbjct: 118 IADTMVQIFKGLQERFQTEIQTVNKQFPCEPFKFLEPTLR---------------LEYCE 162

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                ++AG+ +  +D  S    ++L   ++     +   ILD+YP           P +
Sbjct: 163 ALAMLREAGVEMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILDKYPLAVRPFYTMPDPRN 221

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
           P+ +  ++++    E+ +    + DP     R          I  E     + ++     
Sbjct: 222 PKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGIDLEKI---KAYIDSFRF 273

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 274 GAPPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 307


>gi|260950931|ref|XP_002619762.1| hypothetical protein CLUG_00921 [Clavispora lusitaniae ATCC 42720]
 gi|238847334|gb|EEQ36798.1| hypothetical protein CLUG_00921 [Clavispora lusitaniae ATCC 42720]
          Length = 556

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 112/356 (31%), Gaps = 53/356 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRA 61
           D     R               ++ I +  RE+     F EI +   L  +    ++   
Sbjct: 228 DTRLDARVIDLRTPTNQAIFKIQHGICALFREFLSSKGFTEIHTPKILGSASEGGSN--V 285

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
           F        + ++  YL  SP+F  ++L+AA  EK+F  A  +R        H  EF  L
Sbjct: 286 FEV-----SYFKRSAYLAQSPQFYKQQLIAADFEKVFEVAPVFRAENSNTHRHMTEFVGL 340

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   A E +   + + +  +        +  ++ +          E              
Sbjct: 341 DLEMAFEEHYDEVMEVLENLFIFIFTELKNRYAKEIATVRKQYPVEEF------------ 388

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                     +          + AG  V   +  S    ++L + +      +   ILD+
Sbjct: 389 -KLPADGKMVRLHFKEGIAMLRAAGKEVDDFEDLSTENEKLLGKLVRDKYDTD-FYILDK 446

Query: 241 YPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           +P           P DPR++  ++ +    E+ +    + DP   + R +          
Sbjct: 447 FPLAVRPFYTMPCPEDPRYSNSYDFFMRGEEILSGAQRIHDPELLKERMK---------- 496

Query: 300 NETYPIDE------DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              + +D       D++          +G  +G +R++M      NI      P  
Sbjct: 497 --AHEVDYTMDGVSDYVDAFTYGCAPHAGGGIGLERVLMFFLDLKNIRRASLFPRD 550


>gi|118602198|ref|YP_903413.1| tRNA synthetase, class II (D, K and N) [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
 gi|118567137|gb|ABL01942.1| tRNA synthetase, class II (D, K and N) [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
          Length = 293

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 28/310 (9%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           L+KR  +   +R++F +   +E+ + +L  +P ++ +I + S  +     ++   YL TS
Sbjct: 7   LIKRQRVIQKIRQFFEQQAVLEVQTPTLINTPTSDAYIDSISLSVNANIGMQNTQYLHTS 66

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE   KKLL  G   I+     +R+ E G  +  EFT+LE+YR      QLM D +N+++
Sbjct: 67  PELEMKKLLVQGSGDIYQICQVFRDNEYGEHNSNEFTLLEYYRLGFDINQLMADMVNLLQ 126

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
                                 +   ++ A+ F++YA+ID+          D  +L + A
Sbjct: 127 ----------------TLGIQDKVHQLSYAQVFSQYADIDVLN-------TDFDVLKVIA 163

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            + G+         ++   + +  +EP L       +  YP  +SA A +         R
Sbjct: 164 SKLGLSTDF-AWIEELQMLLFVHLVEPKLKNIPLCFIYDYPKSQSAFAKVKNQ---VAHR 219

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           FELY   IE+ N  DEL    E +  F  E  ++K++      I   FL+ L   +PQ S
Sbjct: 220 FELYLNGIEVANGYDELQTKDEYQQVFTCETIKRKQLGKPISQIGVSFLSKLNKSLPQCS 279

Query: 321 GIAMGFDRLV 330
           G+A+G +RL+
Sbjct: 280 GVAIGINRLL 289


>gi|325968136|ref|YP_004244328.1| aspartyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323707339|gb|ADY00826.1| aspartyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 433

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 68/366 (18%), Positives = 129/366 (35%), Gaps = 64/366 (17%)

Query: 4   IPSQPWW----NRDFHYRRRPFLLKR----------NMIQSSLREYFVENQFIEIDSM-S 48
           +P   W     + D   + R   LKR          +    ++RE      FIE+ +   
Sbjct: 107 LPIDIWGSVETDLDTRLKFRSIDLKRPFNLLIFRVESETVRAIRETLYGRDFIEVFTPKI 166

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +  S      +  F+ +     +  +  YL  SP+   K+ L A  E+IF  A A+R  +
Sbjct: 167 IVTSTEGGAEL--FTVQ-----YFERIAYLAQSPQLY-KEELTASLERIFEIAPAYRAEK 218

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H  EF  ++   A   Y  +M+   ++I    +  +                   
Sbjct: 219 HNTNYHLNEFISVDIEEAFADYMDVMEILEDVIVNVYDRVS------------------R 260

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +   E       + +          D  L  L  +   I    D   + +   +  E +E
Sbjct: 261 LYGNELAKYGIEVKVPKRPFRKITYDEALDILSKRGLRINWGEDVPKNGM-EILSEEIVE 319

Query: 228 PNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           P         +  +P    +       +DP+ ++ F+L    +E+ +    +    EQ  
Sbjct: 320 P-------FFIIHFPTDLRAFYTKPLDSDPKISESFDLVIDGLEIASGSSRIH-IKEQL- 370

Query: 287 RFEKEMQEKKKIYNETYP---IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
               +  +KK +  E++    +  D+      MP  +G  MG  RL+M++   +NI EV+
Sbjct: 371 ---MDALKKKGLNPESFENHLMIYDY-----GMPPHAGWGMGLYRLLMVLLKRSNIREVV 422

Query: 344 WTPFSQ 349
             P  +
Sbjct: 423 LYPRDR 428


>gi|295703515|ref|YP_003596590.1| asparaginyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294801174|gb|ADF38240.1| asparaginyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 430

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 107/353 (30%), Gaps = 50/353 (14%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    R+   +  RN I  +  E+F EN F ++D   L   +P         
Sbjct: 114 MDNRHLWLRSK--RQHAVMKVRNEIIRATYEFFNENGFTKVDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  +K     +    +                      +T  +        D
Sbjct: 224 PEMAFYQFEDNLKVQEEYVSHVVQSV--------------------LTNCKLELNVLGRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +    +   D  W D F       I  +   +    +  Y
Sbjct: 264 TSKLEQIKAPFPRISYDDALKFLHEKGFTDIQWGDDFGAPHETAIAESY--DKPVFITHY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           P +       +L A          E++       R   +    ++   
Sbjct: 322 PTSLKPFYMQPDPTNEDVVLCADLIAP-----EGYGEIIGGS---ERIHDQELLAQR--V 371

Query: 301 ETYPID----EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E + +D    + +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 372 EEHKLDTETYKWYLELRKYGSVPHSGFGLGLERTVAWISGVEHVRETIPFPRL 424


>gi|260495699|ref|ZP_05815822.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260196764|gb|EEW94288.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 461

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  +L ++F EN F+ + +  +  S       +  F    +
Sbjct: 120 AHLRPRTNTFSAVFRVRSVLAYALHKFFQENNFVYVHTPIITGSDAEGAGEM--FRVTTL 177

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             + + K            +     L  S +    +   A    ++ F   +R       
Sbjct: 178 DMNKLPKKENGEVDFTKDFFGKSTNLTVSGQL-NVETFCAAFRNVYTFGPTFRAEYSNTA 236

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+    +++   +                F+      + 
Sbjct: 237 RHASEFWMVEPEIAFADLSANMELAEAMVKFVIKYVMDTCPE----EMEFFNSFIEKGLF 292

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N + G                  +++G +      W           +     
Sbjct: 293 DKLNNVLNNEFGRITYTE-------AIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYF 345

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +  +  +L A  I       +  D  E   +    
Sbjct: 346 KKPV-FVTDYPKEIKAFYMKLNEDGKTVRAMDLLAPGIGEIIGGSQREDSYEILLK---- 400

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K+   NE     E +L          SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 401 -RMKELGLNEEDY--EFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRT 455


>gi|291525649|emb|CBK91236.1| aspartyl-tRNA synthetase, archaeal type [Eubacterium rectale DSM
           17629]
          Length = 443

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 108/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  I    R++   N F EI +  L   S     ++          ++ 
Sbjct: 135 RNPRERATFRIQEGITRGFRDFLYNNGFTEIHTPKLGAKSAEGGANL-------FKLEYF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P  LQ SP+F  +  +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 188 HRPAILQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            + +             +                   T          I L      P  
Sbjct: 247 DIMEMETGFLQYTMELLK-------------------TSYAKELELLKIKLPDVTSIPRV 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                    A++   +  +          ++ +  +   G +    +  YP+ +     +
Sbjct: 288 RFDEAKQRVAEKYNRQFRNPFDLEPEEEVLIGQYFKEEYGSD-FVFVTHYPSKKRPFYAM 346

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               D  +T  F+L    +E+      + D  +   +       K+ +  E     E +L
Sbjct: 347 DDPADETYTLSFDLLFRGLEITTGGQRIHDYNKLMEKI-----AKRGMETEGM---ESYL 398

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     MP   G+ +G +RL M + G +N+ E    P  
Sbjct: 399 SAFKHGMPPHGGLGIGLERLTMQLIGEDNVREATLFPRD 437


>gi|320526935|ref|ZP_08028124.1| asparaginyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132520|gb|EFW25061.1| asparaginyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 462

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 108/344 (31%), Gaps = 34/344 (9%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+++  ++ ++F +  F+ + +  +  +          F+     
Sbjct: 131 HLRPRTNTFSAVFRVRSVLAMAIHQFFQDQGFVYVHTPIITGADAEGAGE--TFTVTTRE 188

Query: 69  QDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
             +  +  +     L  S +   +    A    I+ F   +R        H  EF M+E 
Sbjct: 189 DGNYEEDFFGKHASLTVSGQLQAEAYAMA-FRDIYTFGPTFRAENSNTTTHAAEFWMIEP 247

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    +  M    ++++                    F+E    ++ E       ++ 
Sbjct: 248 EMAFADLDYSMDVIEDMLKYCINYV----MEMCPEELAFFNERIDTSLLER------LEH 297

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             T +    P    + +          ++  W    +      I   +       L  YP
Sbjct: 298 VRTSNFKRLPYTEAIEILKNADVKFENNNIHWGMDLNTEHERYITEKVVKGPT-FLIDYP 356

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
               A       D +     +L    +       EL+   ++  R +   ++ + +    
Sbjct: 357 EEIKAFYMRRNDDGKTVAACDLLVPGV------GELVGGSQREERLDILEKKMESLGMNV 410

Query: 303 YPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               + +L        Q +G  +GF+RLVM +TG  NI +V+  
Sbjct: 411 EGY-QWYLDLRRYGGCQHAGFGLGFERLVMYITGMENIRDVVPF 453


>gi|307354031|ref|YP_003895082.1| aspartyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157264|gb|ADN36644.1| aspartyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 429

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 58/343 (16%), Positives = 111/343 (32%), Gaps = 46/343 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDH 71
              +       R+ +  +L E+     FI I +  +  +   G         TEL    +
Sbjct: 125 RRPKINSIFSIRSNVTRALYEFMFSEGFINITTSKIVAAATEGG--------TELFPIAY 176

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  +L  SP+   + ++AAG +K+F     +R  E     H  E T ++   +   + 
Sbjct: 177 FDKEAFLNQSPQLYKQMMMAAGFDKVFEIGPIFRAEEHNTTRHLNEATSIDVEVSFADHN 236

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +I  A     +                      +       I+         
Sbjct: 237 GVMELLEKVIIAAYGAVEKNC--------------------QNEIETLGIEFEVPKTPFP 276

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA- 249
           +         A    I +  + ++ D  S      I   +G      +  +P        
Sbjct: 277 KVTYAEAIDIAA---ISIDEEISYGDDLSTAAERAIGDEMGE--HYFITDWPTSIKPYYA 331

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
             Y  +P   K F+L    +EL +    +     Q     ++++EK    +      E +
Sbjct: 332 MPYEDEPEICKAFDLMHPKMELSSGAQRIH----QHDLLVEQIREKGLSPDS----FEFY 383

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           L      MP  +G  +G +RL+M +    NI E +  P  +  
Sbjct: 384 LKPFRYGMPPHAGWGLGMERLIMTMLDLPNIREAVLFPRDRHR 426


>gi|49522592|gb|AAH75373.1| aspartyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 531

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ +    RE   +  F+EI +  +  +  +E    
Sbjct: 205 NQDTRLDNRVIDLRTSTSQAVFGLQSGVCQLFRETLTQKGFVEIQTPKIISAA-SEGGAN 263

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 264 VFTVSYFKTSA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 318

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + D +           Q+ F  +          E     E   R   
Sbjct: 319 LDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVCKQFPSEPFKFLEPTLR--- 375

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   ILD
Sbjct: 376 ------------LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 422

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P DP+++  ++++    E+ +    + DP     R          I
Sbjct: 423 KYPLAVRPFYTMPDPQDPKYSNSYDMFMRGEEILSGAQRVHDPQLLTER-----ATHHAI 477

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 478 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRD 525


>gi|45361459|ref|NP_989306.1| aspartyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|39794467|gb|AAH64273.1| aspartyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 531

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ +    RE   +  F+EI +  +  +  +E    
Sbjct: 205 NQDTRLDNRVIDLRTSTSQAVFGLQSGVCQLFRETLTQKGFVEIQTPKIISAA-SEGGAN 263

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 264 VFTVSYFKTSA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 318

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + D +           Q+ F  +          E     E   R   
Sbjct: 319 LDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVCKQFPSEPFKFLEPTLR--- 375

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   ILD
Sbjct: 376 ------------LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 422

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P DP+++  ++++    E+ +    + DP     R          I
Sbjct: 423 KYPLAVRPFYTMPDPQDPKYSNSYDMFMRGEEILSGAQRVHDPQLLTER-----ATHHAI 477

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 478 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRD 525


>gi|195382876|ref|XP_002050154.1| GJ20350 [Drosophila virilis]
 gi|194144951|gb|EDW61347.1| GJ20350 [Drosophila virilis]
          Length = 537

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/355 (16%), Positives = 116/355 (32%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   E  F EI +  +  +  +E    
Sbjct: 211 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAA-SEGGAN 269

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K++     +R  +     H  EF  
Sbjct: 270 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVG 324

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                +Y    EA  +   
Sbjct: 325 LDLEMAFKYHYHEVLHT---------------IGNTFTAIFKGLRDKYSREIEAVGQQYK 369

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+ P   +        ++AGI    ++  S    ++L   ++     +   ILD
Sbjct: 370 VEPFKFLEPPLILEFAEGVAMLREAGIETGDEEDLSTPNEKLLGRLVKAKYDTD-FYILD 428

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P +P ++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 429 KFPLSIRPFYTMPDPNNPIYSNSYDMFMRGEEILSGAQRIHDP--------EYLIERAKH 480

Query: 299 YNETYPID----EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 481 ----HGIDTTKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 531


>gi|315646475|ref|ZP_07899593.1| asparaginyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315278118|gb|EFU41438.1| asparaginyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 431

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 111/349 (31%), Gaps = 43/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++R  ++ R  I  +++ YF  N F  +D   L  +    T      
Sbjct: 116 MDHRHLWLRT--QKQRAIMVIRAEIIRAVQAYFDTNGFTLVDPPILTPTSAEGT------ 167

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T L    +  +  YL  S +    +  A    K++ F   +R  +     H  EF M+E 
Sbjct: 168 TNLFHTKYFEEDAYLTQSGQLYM-EAAAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEP 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E+ ++     I    +   +                               D+
Sbjct: 227 EMAFTDHEESLQVQEQFISYVVQSVVKNCR--------------------QELEAIGRDI 266

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L+    P   + Y +A +       D  W + F       I      +    +  YP
Sbjct: 267 SK-LEAIQAPFPRITYDEAIEFLHTQGFDIPWGEDFGAPHETAIAEKY--DKPVFITHYP 323

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           A   +      P  P      ++ A     E+      + DP     RF++     +   
Sbjct: 324 AGIKAFYMKPDPNRPEVVLCADMIAPEGYGEIIGGSQRIDDPQLLEERFKEHELSMET-- 381

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              + +D   L         SG  +G +R V  + G +++ E I  P +
Sbjct: 382 -YQWYMD---LRK-YGTVPHSGFGLGLERTVAWICGLDHVRETIPFPRT 425


>gi|166030609|ref|ZP_02233438.1| hypothetical protein DORFOR_00275 [Dorea formicigenerans ATCC
           27755]
 gi|166029611|gb|EDR48368.1| hypothetical protein DORFOR_00275 [Dorea formicigenerans ATCC
           27755]
          Length = 443

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 117/339 (34%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  +  + R++    +F EI +  +   S     ++          ++ 
Sbjct: 135 RNIRERAKFRIQEGLTRAFRDFLYSQEFTEIHTPKIGAKSAEGGANL-------FKLEYF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P  LQ SP+F  +  +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 188 HRPAVLQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEIGYIDGFE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +          A    +K ++ +                    +  N++L      P  
Sbjct: 247 DIMGMETGFLQYAMELLKKDYARE-------------------LKILNVELPKVDQIPAV 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +  L A++   ++ +          ++ +  +   G +    +  YP+ +     +
Sbjct: 288 KFSEIKELVAEKYNHKMRNPFDLEPEEEVLIGKYAKEEWGSD-FVFVTHYPSKKRPFYAM 346

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               DP++T  F+L    +E+      + D      + E      + +          +L
Sbjct: 347 DDPEDPKYTLSFDLLFRGLEITTGGQRIHDYQTLLKKIEVRGMTTEGMDQ--------YL 398

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           A     MP   G+ +G +RL M + G +N+ E    P  
Sbjct: 399 ATFKHGMPPHGGLGIGLERLTMQLLGEDNVRETTLFPRD 437


>gi|225850647|ref|YP_002730881.1| lysyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225646712|gb|ACO04898.1| lysine--tRNA ligase [Persephonella marina EX-H1]
          Length = 309

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 93/317 (29%), Positives = 149/317 (47%), Gaps = 14/317 (4%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           + I   +R+YF     IE+ +  L+  P  + HI          +  RK  +L TSPE+ 
Sbjct: 7   SKILKGIRDYFERTGAIEVFTDILRLYPNLDAHILPVEL-FFNDNEGRKRGFLHTSPEYE 65

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            K++L+  +  I+     +RN E    H+ EFTMLEWYR   + + +M D  NI   +A 
Sbjct: 66  MKRILSEIKRDIYQITKVFRNFESSKKHKIEFTMLEWYRVGYNLDDIMDDTQNIFIESAI 125

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
              +K             E E ITV EAF R+ ++           PDR+   ++  +  
Sbjct: 126 SLYKKPVVTYMGKRYDLRESEKITVDEAFYRFTSV----------YPDRYEDMIRFLKEK 175

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
             +  +  + + F RI    +EPNLG    T +  YP   ++L      +    KRFE Y
Sbjct: 176 EDIKEEIDYEEAFFRIYAFYVEPNLGKEKLTFIYNYPTAFASL---SKIENNRGKRFEAY 232

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
              +EL N   EL DP + ++  E+E   KK+   + YP+D  F+    ++P  SG ++G
Sbjct: 233 INGLELVNGYHELTDPEKVKNILEREALRKKEETGKDYPVDYRFIEITEDLPDCSGASLG 292

Query: 326 FDRLVMLVTGANNINEV 342
            DRL M++   +NI ++
Sbjct: 293 IDRLFMVLLNKSNIKDI 309


>gi|290987373|ref|XP_002676397.1| predicted protein [Naegleria gruberi]
 gi|284089999|gb|EFC43653.1| predicted protein [Naegleria gruberi]
          Length = 499

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 64/340 (18%), Positives = 114/340 (33%), Gaps = 24/340 (7%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETH-IRAFSTELI 67
           H R R       L  RN    ++ EYF    FI+I +  L  S         +  S +  
Sbjct: 164 HLRSRTNTGAAVLRVRNAAMMAIHEYFQNLDFIQIHTPILTSSDCEGAGEQFKVISEQHK 223

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH 126
                    YL  S +   +   ++   K++ F   +R  +     H  EF M+E  +A 
Sbjct: 224 DFFGENVNAYLTVSGQLEAEIFASSMS-KVYTFGPTFRAEDSRTSRHLAEFWMVEMEQAF 282

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
               Q+++   N++R A              + + F++    T+ E   + A+       
Sbjct: 283 IGLPQIVEHSENMVRHAVSRV----LERCEEDIHFFNKWYKNTLMEDLTKVADKRTKFVS 338

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
                    L     Q+ GI+  +   W           +      N    +  YP    
Sbjct: 339 LTYTDAVELLQKDAIQKNGIKFEYPVEWGVNLHSEHEVYLCK--YFNSPVFVTNYPKEIK 396

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ-EKKKIYNETYPI 305
                   + +     +L   ++       EL+    +  R++  +Q  K K   +T   
Sbjct: 397 PFYARVDDNGKTMSAVDLLVPDL------GELIGGSVREERYDILIQNMKDKGMKDTKDY 450

Query: 306 DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            E +L           G  +GF+RL++ +TG  NI E I 
Sbjct: 451 -EWYLDLRKYGTVPHGGFGLGFERLILFLTGIPNIRETIP 489


>gi|148984890|ref|ZP_01818143.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147922912|gb|EDK74028.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301800375|emb|CBW33006.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 447

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   L  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELDMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|256822768|ref|YP_003146731.1| asparaginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796307|gb|ACV26963.1| asparaginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 465

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 59/371 (15%), Positives = 111/371 (29%), Gaps = 44/371 (11%)

Query: 1   MHQIPSQPWWNRD-FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P    + RD  H R R  L       RN +  ++  +  E  +  I +  +  S  
Sbjct: 110 IQPKPHSVEFLRDNAHLRPRTNLIGAVTRVRNCLAQAVHRFMHEQGYFWIHTPIITASDA 169

Query: 54  GNETHIRAFSTELIIQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST  +               D   K  +L  S + + +    A   K++ F
Sbjct: 170 EGAGEMFRVSTLDMTNLPKTDKGDIDYSKDFFGKESFLTVSGQLNVESYCMAMS-KVYTF 228

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A  +          +++   +    +         
Sbjct: 229 GPTFRAENSNTSRHLAEFWMVEPEIAFANLSDNADLAEAMMKYIFKAVLDECADDMAF-- 286

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                 +     +   R  N+       N ++ D   +    ++A  +  +   W     
Sbjct: 287 -----FQQRVDKDCINRLENV----INHNFERMDYTDVIDVLKKADKKFDYPVEWGIDLQ 337

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 I     +   T++  YP    A       D +             L     E++
Sbjct: 338 SEHERYIAEEY-VGRPTVVMNYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 390

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +   +  +++       D  +   L        +G  +GFDR V  VTG  
Sbjct: 391 GGAQREERLDVLDKRIEEMGLPAE--DYWWYRDLRRYGTVPHAGFGLGFDRCVSYVTGVQ 448

Query: 338 NINEVIWTPFS 348
           NI +VI  P  
Sbjct: 449 NIRDVIPFPRV 459


>gi|331224927|ref|XP_003325135.1| aspartate-tRNA ligase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309304125|gb|EFP80716.1| aspartate-tRNA ligase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 582

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 110/333 (33%), Gaps = 33/333 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ + +  R +     FIEI +  +Q +   E+    F        +  +  +L
Sbjct: 274 QAIFRVQSRVCNLFRTFLDSEDFIEIHTPKIQGAA-TESGASVFK-----LGYFEQTAFL 327

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+ + +  +AA  E+++     +R        H  EF  L+   A + +     D +
Sbjct: 328 AQSPQLAKQMAIAADFERVYEIGPVFRAENSNTYRHMTEFIGLDLEMAIKEHYHEAVDLL 387

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +  +     Q   + +                        +D    L+   +      
Sbjct: 388 DRLFISIFKGLQASSAPEIQTIKSQHP---------------VDDFIFLEKTLRLQHSQA 432

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
                  GI +           RIL + I+     +   I+D++P           P DP
Sbjct: 433 IQILIDHGIDIQIGQDMGTEQERILGKLIKEKYQTD-YYIIDKFPLAIRPFYTMPDPVDP 491

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
             +  ++ +    E+ +    +  P     R ++      KI  +     + +L      
Sbjct: 492 TSSNSYDFFMRGEEIISGAQRIHAPELLIERMKE-----AKIDPKEM---KGYLDGFKLG 543

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P  +G  +G +R+VML  G  NI +    P  
Sbjct: 544 CPAHAGGGIGLERVVMLFFGLGNIRKACLFPRD 576


>gi|291087320|ref|ZP_06346111.2| asparagine--tRNA ligase [Clostridium sp. M62/1]
 gi|291075369|gb|EFE12733.1| asparagine--tRNA ligase [Clostridium sp. M62/1]
          Length = 550

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 105/357 (29%), Gaps = 45/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL-- 66
           H R R          R++I  ++ +YF E  F+ + +  +  S       +   +T    
Sbjct: 210 HLRPRTNTFQAVFRVRSLIAYAIHQYFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLA 269

Query: 67  -----------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                        QD   KP  L  S + + +    A    ++ F   +R        H 
Sbjct: 270 NVPKASDGSVDFSQDFFGKPTNLTVSGQLNAETYAMA-FRNVYTFGPTFRAENSNTTRHA 328

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       M    ++++                  N F++     + +  
Sbjct: 329 AEFWMIEPEMAFADLNDNMALAESMLKYVIRYV----LEHAPEEMNFFNQFIDKGLLDRL 384

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               N + G                  ++      +   W           +   +    
Sbjct: 385 NHVLNSEFGHVTYTE-------AVKLLEEHNDEFDYKVFWGCDLQTEHERYLTEQI-FKR 436

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP    A       D +     +     I E+        D  +   R ++   
Sbjct: 437 PVFVTDYPKEIKAFYMKMNEDGKTVAAMDCLVPGIGEIIGGSQREDDYEKLLARMDELGL 496

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +K+         D  F   L      + SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 497 KKE---------DYGFYLDLRKYGSVRHSGFGLGFERCVMYLTGMGNIRDVIPFPRT 544


>gi|319651309|ref|ZP_08005439.1| asparaginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317397089|gb|EFV77797.1| asparaginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 431

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 110/350 (31%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    R+   +  RN I  +  E+F E  F ++D   L   +P   + +  F
Sbjct: 115 MDNRHLWLRSR--RQHAVMKIRNEIIRATYEFFNEQGFSKVDPPILTGSAPEGTSEL--F 170

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+     +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 171 ATK-----YFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   ++  +K     +    +   +              + E IT       Y    
Sbjct: 225 PEMAFCEFDDNLKVQEEYVAHIVQSVLKNCSIELKTLGRDTEKLEKITAPFPRITY---- 280

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               Q+ G     D  W D F       I  +   +    +  Y
Sbjct: 281 -------------DEAIKFLQEKGFD---DIQWGDDFGAPHETAIAESY--DKPVFITHY 322

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P             P  ++   +   ++       E++       R       K+++   
Sbjct: 323 PTSLKPFYMQ----PDPSREDVVLCADLIAPEGYGEIIGGS---ERIHDYDLLKQRLDEH 375

Query: 302 TYPID--EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +D  + +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 376 KLDMDAYKWYLELRQYGSVPHSGFGLGLERTVAWISGVEHVRETIPFPRL 425


>gi|160933834|ref|ZP_02081222.1| hypothetical protein CLOLEP_02696 [Clostridium leptum DSM 753]
 gi|156867711|gb|EDO61083.1| hypothetical protein CLOLEP_02696 [Clostridium leptum DSM 753]
          Length = 470

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 50/357 (14%), Positives = 105/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
            H R R          R+     + ++F E  FI   +  L  S       +   +T   
Sbjct: 129 AHLRPRANTFSAAFRVRSAAAFGIHKFFQERGFIYAHTPILTGSDCEGAGEMFTATTLDL 188

Query: 65  --ELIIQDH---IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                 +D      +  +     L  S +    + +A    K++ F   +R  +     H
Sbjct: 189 EDPPRGEDGRIDFSQDFFEKHTSLTVSGQLEA-ECMAMAFGKVYTFGPTFRAEKSYTQRH 247

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M    ++++                +   F++     + + 
Sbjct: 248 AAEFWMIEPEIAFADLNDDMDLARDMMKYVIRYVMDTC----PQDLQFFNQFVDKGLIDR 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                  D                    ++   +  +   W         + +       
Sbjct: 304 LTHIVESDFAHVTYTE-------AVEILKKHNSQFEYQVDWGVDLQTEHEKYLTEQ-VFQ 355

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE-M 292
               +  YP    +       D R     ++    I       E++   ++  R ++   
Sbjct: 356 KPVFVTDYPKEIKSFYMRMNDDGRTVAAMDMLVPGI------GEIIGGSQREERLDRLTA 409

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+    E       +L        + +G  +GF+RL+M +TG  NI +V+  P +
Sbjct: 410 RMKELGLKEADY--WWYLDLRRFGTNKHAGFGLGFERLIMYLTGIQNIRDVLPFPRT 464


>gi|268573520|ref|XP_002641737.1| C. briggsae CBR-DRS-1 protein [Caenorhabditis briggsae]
 gi|187031522|emb|CAP29586.1| CBR-DARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 531

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 105/349 (30%), Gaps = 43/349 (12%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               +  I +  R       F+EI +  +  +P +E     F
Sbjct: 207 DTRLDNRVLDLRTTTSHAIFRIQAGICNQFRNILDARGFVEIMAPKIISAP-SEGGANVF 265

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                         YL  SP+   +  +A   EK++     +R  +     H  EF  L+
Sbjct: 266 EVSYFKGSA-----YLAQSPQLYKQMAIAGDFEKVYTIGPVFRAEDSNTHRHMTEFVGLD 320

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +   + + +  +        Q+ +  +          E     E        D
Sbjct: 321 LEMAFNFHYHEVMETIAQVLTQLFKGLQQNYQDEISAVGNQYPAEPFQFCEPPLILKYPD 380

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++  + +  ++  S    + L + ++     +   +LD++
Sbjct: 381 ---------------AIALLREHKVEIGDEEDLSTPVEKFLGKLVKEKYHTD-FYVLDKF 424

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P             D R++  ++++    E+ +    + D      R +    +  KI  
Sbjct: 425 PLAVRPFYTMPDAHDGRYSNSYDMFMRGEEILSGAQRIHDADMLVERAKHHQVDLAKI-- 482

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 + ++       P  +G  +G +R+ ML  G +NI      P  
Sbjct: 483 ------QSYIDAFKYGCPPHAGGGIGLERVTMLFLGLHNIRLASLFPRD 525


>gi|225375172|ref|ZP_03752393.1| hypothetical protein ROSEINA2194_00796 [Roseburia inulinivorans DSM
           16841]
 gi|225212982|gb|EEG95336.1| hypothetical protein ROSEINA2194_00796 [Roseburia inulinivorans DSM
           16841]
          Length = 443

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/338 (15%), Positives = 111/338 (32%), Gaps = 38/338 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            + R R     +  +    R++  E  F EI +  +  + G E     F       D+  
Sbjct: 135 RNIRERAKFKIQEGVVRGFRDFLYEQGFTEIHTPKI-GAKGAEGGANMFR-----MDYFH 188

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           +P  L  SP+F  +  +    +++F  A  +R  +     H  E+T L++   +    + 
Sbjct: 189 RPAVLAQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFED 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +               +K +                   E   +   + L      P   
Sbjct: 248 IMAMETGFLQYMVDLLKKDY-------------------EKELKILGVTLPNVDKIPTVR 288

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                   A++ G ++ +          ++ +  +     +    +  YP+ +     + 
Sbjct: 289 FDEAKRKVAEKYGRKIRNPYDLEPEEEALIGQYFKEECDAD-FVFVTHYPSKKRPFYAMD 347

Query: 253 PA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              DP FT  F+L    +E+      + D      + E     K+ +  E     E ++ 
Sbjct: 348 DPADPTFTLSFDLLYHGLEITTGGQRIHDYNMLLEKIE-----KRGMTTEGM---EQYMD 399

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                MP   G+ +G +RL M + G +N+ E    P  
Sbjct: 400 TFKHGMPPHGGLGIGLERLTMKLIGEDNVRETTLFPRD 437


>gi|313888504|ref|ZP_07822171.1| asparagine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845533|gb|EFR32927.1| asparagine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 462

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETH--------- 58
            H R R          R++I  ++ ++F E  F+ + +  +  S                
Sbjct: 121 AHLRPRANTFNAVFRVRSLIAYAIHKFFQEKGFVYVHAPIITTSDAEGAGEMFQVTTLDI 180

Query: 59  ---IRAFSTELIIQ-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
               ++  TE+    D   K  +L  S +   +    A    I+ F   +R        H
Sbjct: 181 DKIAKSEPTEVDYSKDFFNKKTHLTVSGQLEAEAFAEA-FRDIYTFGPTFRAENSNTQRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M     +++                    F+      + E 
Sbjct: 240 AAEFWMIEPEMAFADLNVNMDVSEEMLKYIISYV----LENAPQEMEFFNNFIDKGLLER 295

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                  +                    ++A     +  +W           I   +   
Sbjct: 296 LHNVVENEFARITYTE-------AIEILEKADKEFNYPVSWGIDLQTEHERYITEEVYKK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    +       E++   ++ HRF+   +
Sbjct: 349 PV-FVTDYPKEIKAFYMYENEDKKTVAAMDLLVPGV------GEIIGGSQREHRFDVLEE 401

Query: 294 EKKKIYNETYPIDE--DFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K I      +D    +L          SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 402 KMKNIG---MDMDNYNWYLDLRRYGSVVHSGFGLGFERAVMYITGMKNIRDVIPFPRT 456


>gi|289424110|ref|ZP_06425896.1| asparagine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289155535|gb|EFD04214.1| asparagine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 466

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/357 (16%), Positives = 112/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETH--------- 58
            H R R          R+++  +L ++F E  F+   +  +  S                
Sbjct: 125 AHLRPRSNTFSAVFRVRSVVAFALHKFFNERNFVYAHTPLITGSDTEGAGEMFQVTTLDM 184

Query: 59  IRAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                TE    D+      KP  L  S +    +++A     I+ F   +R        H
Sbjct: 185 ANPPLTEDGKIDYSQDFFGKPTNLTVSGQL-NGEIMALAFRNIYTFGPTFRAENSYTGRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E        E LM+   ++I+                    F+      + E 
Sbjct: 244 ASEFWMVEPEIVFADLEDLMELAEDMIKFVINYV----LENCPEEMAFFNSFIDKGLFER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             +  + D                     ++G +  +   W           I      N
Sbjct: 300 LDKIVSSDFVRITYTE-------AVDILLKSGHKFEYPVEWGCDLQTEHERYITEE-VYN 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +  +  +L    +       E++   ++  R++  M 
Sbjct: 352 APVFVTDYPKDIKAFYMRMNDDGKTVRAMDLLVPGV------GEIIGGSQREERYDVLMD 405

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + ++   NE       +L          SG  +GF+R++M +TG +NI +VI  P +
Sbjct: 406 KIREMGLNEEEY--WWYLELRKFGTATHSGFGLGFERIIMYLTGMSNIRDVIPFPRT 460


>gi|1001357|dbj|BAA10844.1| asparaginyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 513

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 112/356 (31%), Gaps = 44/356 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI- 67
           H R R       +  RN   +++ ++F E  F+ + +  +  S       +   +T  + 
Sbjct: 174 HLRPRTNTIGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGDLFKVTTLDLQ 233

Query: 68  -----------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQP 115
                       QD   K  YL  S +    +++A   + ++ F   +R        H  
Sbjct: 234 RVPKNGEGIDYSQDFFGKQAYLTVSGQLEA-EVMALAFQNVYTFGPTFRAENSNTSRHLA 292

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A    E   +     ++   +   +K              PE +   +   
Sbjct: 293 EFWMVEPEMAFCDLEGDRQWAEEFLKYIFKFVLEKC-------------PEDMEFFDQRI 339

Query: 176 RYANIDLGTTLDNPDQP--DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               +     + N +             ++A  +  +   W           +       
Sbjct: 340 DNTVLATADNIINNEFAWLTYSEAIKLLEKADQKFEYPVAWGVDLQSEHERYLAET-VFK 398

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             TI+  YP    A       D +     ++      L     E++   ++  R +   Q
Sbjct: 399 RPTIVTDYPKDIKAFYMRLNDDGKTVAAMDI------LAPKIGEIIGGSQREERLDILTQ 452

Query: 294 EKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ++       +   +L          +G  +GF+R+V  +TG  NI +VI  P +
Sbjct: 453 RMQEQGVPEEDL-WWYLDLRRYGSVPHAGFGLGFERIVQFMTGMANIRDVIPFPRT 507


>gi|294498164|ref|YP_003561864.1| asparaginyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294348101|gb|ADE68430.1| asparaginyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 430

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 107/353 (30%), Gaps = 50/353 (14%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    R+   +  RN I  +  E+F EN F ++D   L   +P         
Sbjct: 114 MDNRHLWLRSK--RQHAVMKVRNEIIRATYEFFNENGFTKVDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFEEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  +K     +    +                      +T  +        D
Sbjct: 224 PEMAFYQFEDNLKVQEEYVSHVVQSV--------------------LTNCKLELNVLGRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +    +   D  W D F       I  +   +    +  Y
Sbjct: 264 TSKLEQIKAPFPRISYDEALKFLHEKGFTDIQWGDDFGAPHETAIAESY--DKPVFITHY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           P +       +L A          E++       R   +    ++   
Sbjct: 322 PTSLKPFYMQPDPTNEDVVLCADLIAP-----EGYGEIIGGS---ERIHDQELLAQR--V 371

Query: 301 ETYPID----EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E + +D    + +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 372 EEHKLDTETYKWYLELRKYGSVPHSGFGLGLERTVAWISGVEHVRETIPFPRL 424


>gi|18313730|ref|NP_560397.1| asparaginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|18161285|gb|AAL64579.1| asparaginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 431

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/347 (17%), Positives = 115/347 (33%), Gaps = 39/347 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    + +  L  R+ I  ++ EYF +N F E+ +     +   E     F 
Sbjct: 116 LDVRHLWVRSR--KMQAVLKIRHTIFGAIHEYFRKNGFYEVHTPMFITAAV-EGGATLFK 172

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
                 D+  +P+YL  S +F  + L+ +  EK++  A ++R        H  EF   E 
Sbjct: 173 V-----DYFGQPVYLTQSSQFYLEVLIYS-LEKVYVIAPSFRAEPSRTRRHLTEFWHAEM 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A        +    +I    E    +      +        E          Y     
Sbjct: 227 EMAWAGMNDAARVGEELISYVVERVLAERQDELRLLGRRTEFLERAKPPFYRVSY----- 281

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                              ++ GI +   D       R L       L  +   IL  +P
Sbjct: 282 ------------DEAVDILRKKGISINWGDDIGADEERAL------TLEFDKPIILYGFP 323

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
               A    +  DP+  +    +   + L     E++   E+ +  ++ +++  +     
Sbjct: 324 EKLKAFY--HRNDPKRPEVTLSFD--VLLPEGYGEVIGGGERIYEEKELVEKIVRFGLNP 379

Query: 303 YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 ++          +G  +G DRL M +TGA++I +V+  P  
Sbjct: 380 KDY-WWYIDLRKYGSVPHAGFGLGVDRLTMWITGADHIRDVVPFPRD 425


>gi|325103136|ref|YP_004272790.1| asparaginyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324971984|gb|ADY50968.1| asparaginyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 482

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/379 (16%), Positives = 118/379 (31%), Gaps = 46/379 (12%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R          R+ +  ++ ++F E  F  + +  +  S    
Sbjct: 107 PKKHSLEFLREKAHLRFRTTTFNAVFKVRHALAFAIHKFFNERGFTYLHTPIITASDAEG 166

Query: 56  ETHIRAFSTEL---------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
              +  F                     +D   +   L  S +    +L A    +I+ F
Sbjct: 167 AGEM--FRVTTLELGNPPRDEQGNINFKEDFFGRSTNLTVSGQL-EGELGAMALGEIYTF 223

Query: 101 AHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A    E  M    ++++   + A            
Sbjct: 224 GPTFRAENSNTTRHLAEFWMIEPEVAFADLEDNMDLAEDMLKYVIKYALDNCAEEIEFLN 283

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA--------QQAGIRVAHD 211
               + E     +  +  + I+      + D                   Q+       D
Sbjct: 284 TRLLDEEKNKAQKDRSELSLIEKLNFCLDNDFERITYTEAIEILKRSKPNQKKQFNYLID 343

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
           +  +D+ S      +E +       IL  YPA   +       D    +  +  +    L
Sbjct: 344 EWGADLQSEHERYLVEKH--FKKPVILTNYPAEIKSFYM--RQDDNCAEGKQTVSAMDIL 399

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE--DFLACLT-EMPQSSGIAMGFDR 328
                E++   ++  R E   + + ++     P DE   +L          +G  +GF+R
Sbjct: 400 FPGIGEIVGGSQREERLE---RLEARMDEIGIPKDELYWYLDTRRFGTAPHAGFGLGFER 456

Query: 329 LVMLVTGANNINEVIWTPF 347
           LV+ VTG  NI +VI  P 
Sbjct: 457 LVVFVTGMTNIRDVIPFPR 475


>gi|237738740|ref|ZP_04569221.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423843|gb|EEO38890.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 461

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F EN F+ + +  +  S       +  F     
Sbjct: 120 AHLRPRTNTFSAVFRVRSVLAYAIHKFFQENNFVYVHTPIITGSDAEGAGEM--FRITTF 177

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +             K  +     L  S + + +   AA    ++ F   +R       
Sbjct: 178 DLNKVPKKENGEIDFSKDFFGKSTNLTVSGQLNVETYCAA-FRNVYTFGPTFRAEYSNTA 236

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+    +++   +                F+      + 
Sbjct: 237 RHASEFWMIEPEIAFGDLGANMELAEAMVKYIIKYV----MDNCPEEMEFFNSFIEKGLF 292

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D                    +++G +      W           +     
Sbjct: 293 DKLNNVLNNDFARVTYTE-------AIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYF 345

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR-HRFEK 290
                 +  YP    A       D +  +  +L A  I       +  D  +    R ++
Sbjct: 346 KKPV-FVTDYPKDIKAFYMKLNDDNKTVRAMDLLAPGIGEIIGGSQREDNYDLLVKRMDE 404

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K+   +  + +D   L         SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 405 LGLNKE---DYEFYLD---LRRF-GSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRT 455


>gi|194397060|ref|YP_002038174.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|194356727|gb|ACF55175.1| asparaginyl-tRNA synthetase (asnS) [Streptococcus pneumoniae G54]
          Length = 447

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   L  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKAXXQGVXD-RAPQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|322800910|gb|EFZ21742.1| hypothetical protein SINV_00256 [Solenopsis invicta]
          Length = 686

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 118/348 (33%), Gaps = 43/348 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+      F+EI +  +  +  +E    
Sbjct: 194 NQDTRLDNRVLDLRTPANQAIFRVEAGVCKLFRDILTRKGFVEIHTPKIISAA-SEGGAN 252

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+      +      YL  SP+   +  +AA  +K+F     +R  +     H  EF  
Sbjct: 253 VFTVSYFKGNA-----YLAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 307

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   + D +  +        + I++      +                   
Sbjct: 308 LDLEMAFKYHYHEVIDTIGQMFTELFKGLRDIYADDIAAVSQQYP--------------- 352

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+   + +         +AG+ +  +D  S    ++L + ++     +   ILD
Sbjct: 353 VEPFKFLEPALKLEYPQAIELLAEAGVTLGEEDDLSTPDEKLLGKLVKSKYDTD-FYILD 411

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R      +   I
Sbjct: 412 KYPLAVRPFYTMPDPNNPKVSNSYDMFMRGEEIISGAQRIHDPDFLTER-----AKHHGI 466

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             E     + ++       P  +G  +G +R+VML  G +NI +V   
Sbjct: 467 DIEKI---KSYIDAFRYGCPPHAGGGIGMERVVMLYLGLDNIRKVSIF 511


>gi|182415533|ref|YP_001820599.1| asparaginyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177842747|gb|ACB76999.1| asparaginyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 462

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 106/361 (29%), Gaps = 57/361 (15%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  +F E  F+ + +  +  S       +   +T  +
Sbjct: 121 AHLRPRSNLFGAVFRTRSRLAFAIHRFFQERGFVYVHTPIITGSDCEGAGELFRVTTHDL 180

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   +  YL  S +   +    A   K++ F   +R        H
Sbjct: 181 ANPPKREDGLIDDAKDFFARRTYLTVSGQLEAEAFACA-LGKVYTFGPTFRAENSNTSRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M      ++                              E 
Sbjct: 240 ANEFWMIEPEVAFCDLQGNMDLAEEFVKALIREVRTNCAED----------------LEL 283

Query: 174 FARYANIDLGTTLDNPDQPDRH-----LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           FA++ + +L   LD   +               +++G +  +   +           +  
Sbjct: 284 FAKFVDKELLARLDFVLERPFQRVSYTEAIELLKKSGKQFEYPVEYGTNLQSEHERYLTE 343

Query: 229 NLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +   C T +  YP             D   T    L            E++   ++  R
Sbjct: 344 -VVFKCPTTVYNYPKEIKPFYMRLNDDDKTVTAMDVLVP-------GIGEIVGGSQREER 395

Query: 288 FE--KEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            +  +    +  +  + Y     +L          +G  +GF+R++M VTG  NI +VI 
Sbjct: 396 LDVLEANMRRHGVDPKDYG---WYLDLRRYGTVPHAGFGLGFERMLMFVTGVPNIRDVIP 452

Query: 345 T 345
            
Sbjct: 453 F 453


>gi|15901386|ref|NP_345990.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111658385|ref|ZP_01409072.1| hypothetical protein SpneT_02000464 [Streptococcus pneumoniae
           TIGR4]
 gi|148992568|ref|ZP_01822236.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|148997394|ref|ZP_01824999.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|149007545|ref|ZP_01831180.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|149011780|ref|ZP_01832976.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|149021816|ref|ZP_01835823.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168483580|ref|ZP_02708532.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168488796|ref|ZP_02712995.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|168575262|ref|ZP_02721225.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|182684498|ref|YP_001836245.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|221232253|ref|YP_002511406.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225854982|ref|YP_002736494.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225861373|ref|YP_002742882.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650224|ref|ZP_04524476.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237820893|ref|ZP_04596738.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|298230725|ref|ZP_06964406.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254954|ref|ZP_06978540.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298503278|ref|YP_003725218.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|303255328|ref|ZP_07341398.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303260169|ref|ZP_07346141.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262559|ref|ZP_07348500.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264961|ref|ZP_07350876.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266424|ref|ZP_07352312.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269400|ref|ZP_07355170.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|307068186|ref|YP_003877152.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus pneumoniae
           AP200]
 gi|20139908|sp|Q97PR0|SYN_STRPN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|14973032|gb|AAK75630.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147756449|gb|EDK63490.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147760904|gb|EDK67874.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147764211|gb|EDK71143.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147928585|gb|EDK79599.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|147930052|gb|EDK81039.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|172043153|gb|EDT51199.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|182629832|gb|ACB90780.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|183572685|gb|EDT93213.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183578759|gb|EDT99287.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|220674714|emb|CAR69287.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722470|gb|ACO18323.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225726528|gb|ACO22379.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238873|gb|ADI70004.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|301794551|emb|CBW36995.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|301802260|emb|CBW35012.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302597696|gb|EFL64772.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636276|gb|EFL66770.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302638666|gb|EFL69129.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641068|gb|EFL71445.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644002|gb|EFL74261.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645480|gb|EFL75712.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|306409723|gb|ADM85150.1| Aspartyl/asparaginyl-tRNA synthetase [Streptococcus pneumoniae
           AP200]
 gi|327389728|gb|EGE88073.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332072335|gb|EGI82818.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
 gi|332074297|gb|EGI84774.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
 gi|332199587|gb|EGJ13662.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
 gi|332200104|gb|EGJ14177.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
 gi|332200983|gb|EGJ15054.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 447

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   L  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|212638975|ref|YP_002315495.1| asparaginyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212560455|gb|ACJ33510.1| Asparaginyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 454

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 105/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN +  +  E+F EN F+++D   L   +P         
Sbjct: 138 MDHRHLWLRSK--RQHAIMKIRNEVIRATYEFFNENGFVKVDPPILTGSAPEG------- 188

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 189 TTELFHTKYFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 247

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  ++     +    +   +                      +   +    D
Sbjct: 248 PEMAFYQFEDNLQVQEQYVSHIVQSVLKHC--------------------QLELKTLGRD 287

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                +      R       Q    +   D  W D F       I  +   +    +  Y
Sbjct: 288 TSKLENVKPPFARITYDEAIQLLHEKGFDDIQWGDDFGAPHETAIAES--FDKPVFITHY 345

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P  P      +L A     E+    + + D    + R E+        
Sbjct: 346 PTTLKPFYMQPDPNRPEVVLCADLIAPEGYGEIIGGSERIHDYDLLKQRLEEHQLSLDAY 405

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   + +L          SG  +G +R +  + G  ++ E I  P  
Sbjct: 406 --------KWYLELRQYGSVPHSGFGLGLERTIAWICGVEHVRETIPFPRL 448


>gi|168491566|ref|ZP_02715709.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|225859297|ref|YP_002740807.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|183574309|gb|EDT94837.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|225720590|gb|ACO16444.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 447

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 117/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   L  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
               +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 VAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|195485180|ref|XP_002090983.1| Aats-asp [Drosophila yakuba]
 gi|194177084|gb|EDW90695.1| Aats-asp [Drosophila yakuba]
          Length = 531

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 115/355 (32%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   E  F EI +  +  +  +E    
Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAA-SEGGAN 263

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K++     +R  +     H  EF  
Sbjct: 264 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVG 318

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                +Y    E+  +   
Sbjct: 319 LDLEMAFKYHYHEVLHT---------------IGNTFTAIFKGLRDKYSKEIESVGQQFK 363

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+ P            ++AG+    ++  S    ++L   ++     +   ILD
Sbjct: 364 VEAFKFLEPPLILQFADGVAMLREAGVETGDEEDLSTPNEKLLGRLVKAKYDTD-FYILD 422

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P +P ++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 423 KFPLAIRPFYTMPDPNNPVYSNSYDMFMRGEEILSGAQRIHDP--------EYLIERAKH 474

Query: 299 YNETYPIDED----FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 475 ----HGIDTSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 525


>gi|308272072|emb|CBX28680.1| Asparaginyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 460

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 103/356 (28%), Gaps = 42/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFSTE 65
            H R R          R+ +  ++ ++F +  F  I +  +  S      E        +
Sbjct: 120 AHLRPRTNKYGAVFRIRSELSFAIHKFFRDKGFKYIHTPIITGSDCEGAGEMFKVTVMDQ 179

Query: 66  LIIQD----------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
               +             KP  L  S + S + L  A    ++ F   +R        H 
Sbjct: 180 EKAINKNGQADDLQDFFGKPASLTVSGQLSAEMLALA-LGDVYTFGPTFRAENSNTRRHA 238

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E           M      I+   + A ++           F + E +   E  
Sbjct: 239 AEFWMIEPEMVFCDINDDMDLGEQTIKYLTDYALKECKE-DLELFATFVDKELLKNLENI 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                      L + ++           ++  +  ++ ++           +        
Sbjct: 298 C----------LSDFERLPYEEAVKILIKSKEKFEYEVSFGKDLQAEHENYLAAQYFKKP 347

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
             IL  YP            D +     ++    I EL               R E+   
Sbjct: 348 V-ILYNYPKSIKPFYMRLNDDDKTVAAMDILVPGIGELIGGSQREERLDVLELRMEECGL 406

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K+            +L          SG  +GF+RL+MLVTG  NI +VI  P +
Sbjct: 407 LKENY--------WWYLDSRRFGTVPHSGFGLGFERLLMLVTGIKNIRDVIPFPRT 454


>gi|159030332|emb|CAO91227.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 454

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 106/349 (30%), Gaps = 34/349 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRA 61
            H R R       +  RN   +++  +F E  FI + +  +  +      E    T +  
Sbjct: 120 AHLRARTNTLGAVMRVRNACATAIHSFFQEKGFIWVHTPIITANDCEGAGELFTVTSLDL 179

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTML 120
             T    +D   K  YL  S +    +++A     ++ F   +R        H  EF M+
Sbjct: 180 KKTANFAEDFFGKRAYLTVSGQLQA-EVMAMALSNVYTFGPTFRAENSNTSRHLAEFWMV 238

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A    E         ++   +            +   F+E    TV        N 
Sbjct: 239 EPEMAFCDLEGDQDLAEAFLKYIFKFV----LENCPEDLQFFNERIDKTVLSTAENIVNS 294

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           + G    +             ++A  +      W           +   L      I+  
Sbjct: 295 EFGRITYSE-------AIELLEKADRQFEFPVEWGVDLQSEHERYLAEELFKKPV-IVTN 346

Query: 241 YPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YP    A       + +     ++ A  I E+               R +++        
Sbjct: 347 YPKTIKAFYMRLDDNNKTVSAMDILAPKIGEIIGGSQREERLDVLIQRMQEQGM---NPD 403

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  + +D             +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 404 DLWWYLDLR----RYGSVPHAGFGLGFERLVQFMTGMTNIRDVIPFPRT 448


>gi|225857168|ref|YP_002738679.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225725202|gb|ACO21054.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 447

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   L  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|262037915|ref|ZP_06011340.1| asparagine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748058|gb|EEY35472.1| asparagine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 462

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 101/356 (28%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R+++  ++ ++F E  F+ + +  +  S       +   +T   
Sbjct: 121 AHLRPRTNTFFAVFRVRSILAYAIHKFFQEKNFVYVQTPIITGSDAEGAGEMFRLTTLDL 180

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K   L  S + + +    A  +  + F   +R        H
Sbjct: 181 EKLPRTEKGDIDFKQDFFGKESNLTVSGQLNVETFCTA-FKNTYTFGPTFRAENSNTPKH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M     +I+   +                F++     + E 
Sbjct: 240 AAEFWMMEPEIAFADLDVNMDVIEEMIKYIVKYV----MEHAKEEMEFFNKFIDKELFER 295

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                           ++          + A     +   W           +       
Sbjct: 296 L-------DVLMNSGFERITYTEAIEILKNAKQDFEYKVEWGIDLQTEHERYLAEKHFKK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +  +  +L A  I       +  D  +        + 
Sbjct: 349 PV-FVTDYPKDIKAFYMKLNKDRKTVRAVDLLAPGIGEIVGGSQREDNYDVL------LD 401

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  ++          +L          SG  +GFDR++M +TG  NI +VI  P +
Sbjct: 402 KINQMGLNEQDY-WWYLDLRKYGSVPHSGFGLGFDRILMYITGMTNIRDVIPFPRT 456


>gi|83319692|ref|YP_424771.1| asparaginyl-tRNA synthetase [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|123753712|sp|Q2SR42|SYN_MYCCT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|83283578|gb|ABC01510.1| asparaginyl-tRNA synthetase [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 454

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 109/351 (31%), Gaps = 37/351 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R +          R+    ++ ++F +  F+ I S  +  +          F     
Sbjct: 119 AHLRAKTKTFNAIFKIRSAAAYAIHKFFNDRGFVYIHSPIITSNDAEGAGEA--FLVTTR 176

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLE 121
                 K  +     L  S +   +    A  +K++ F   +R        H  EF M+E
Sbjct: 177 EDADYEKDFFAKKASLTVSGQLHAEAFAQA-FKKVYTFGPTFRAENSNTAKHAAEFWMIE 235

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    +  ++   ++++       +              E     + +      N  
Sbjct: 236 PEVAFADLKDNIQLIQDMVKYIINYIFKHN--------RRELEFCNEHLEDGLIDKLNSV 287

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
             +        +   +  QA   G +    D  +           I   +       +  
Sbjct: 288 RNSEFKVTTYTEAIEILKQAVANGHKFEVSDIEFGLDLGTEHERYICEQVNKAPT-FVTN 346

Query: 241 YPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YP    A       D +     +L    I EL        +  +   R ++   +  ++ 
Sbjct: 347 YPKEIKAFYMKQNEDNKTVAAVDLLVPGIGELVGGSQREDNYEKLIKRCKEVNIDIDQL- 405

Query: 300 NETYPIDEDF--LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  E +  L  L    +S+G  +GF+RL+M +TGA+NI +VI  P +
Sbjct: 406 -------EWYNNLR-LYGYYKSAGFGLGFERLIMYITGASNIRDVIPFPRT 448


>gi|289450720|ref|YP_003475204.1| asparagine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185267|gb|ADC91692.1| asparagine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 464

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 104/356 (29%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+    ++ ++F +  F+ + +  +  S       +   +T   
Sbjct: 123 AHLRPRTNLFNAAFRVRSEAAFAIHDFFHKRNFVYVHTPLITGSDCEGAGEMFTVTTLDQ 182

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   K  +L  S +    ++ A   + I+ F   +R        H
Sbjct: 183 KHIPFNDQGEVDYTQDFFGKHTHLTVSGQL-NGEVFAQAFKNIYTFGPTFRAENSYTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++         I          F++     + + 
Sbjct: 242 AAEFWMIEPELAFADLNDMMGVAKDMLQHII----THILKNCPNEIEFFNKFIDKGIKDR 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               A  D                    +QA     +   W           +   L   
Sbjct: 298 LEHVATADFAHVTYTD-------AIELLKQAKQDFKYPVYWGVDLQTEHERYLTEQLFKK 350

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +     I       E++   ++  R +   +
Sbjct: 351 PV-FVTDYPKEIKAFYMRLNDDNKTVAAVDCLVPGI------GEIIGGSQREERLDYLTK 403

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +           +L        + +G  +GF+RL+M +TG +NI +V+  P +
Sbjct: 404 RLAENNLPQEEY-WWYLELRKYGSTRHAGYGLGFERLIMYLTGISNIRDVLPFPRT 458


>gi|24214566|ref|NP_712047.1| asparaginyl-tRNA synthetase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|38258378|sp|Q8F522|SYN_LEPIN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|24195533|gb|AAN49065.1|AE011361_1 asparaginyl-tRNA synthetase [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 435

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/348 (18%), Positives = 125/348 (35%), Gaps = 39/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           I  +  W R    ++   L  R+ +  ++R+YF E  F+ ID+  L  S   E+    FS
Sbjct: 118 ISQRHLWLRSS--KQLAILRVRDSLSFAIRKYFHERDFLLIDTPILTGS-VGESAGTLFS 174

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TE           YL  + +   +  + A   K+FC+   +R  +     H  EF M+E 
Sbjct: 175 TEYFDLG----NAYLAQTGQLYLETAIFAH-NKVFCYGPTFRAEKSKTRRHLTEFWMVEA 229

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A  ++ + +K   + ++   +                    E +  +    +    D 
Sbjct: 230 EVAFATHAENLKLQEDFVKTVIK--------------------ETVQNSFQDLKVLERDP 269

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L   ++    + Y +A +       D  W D  +    + +   +       + +YP
Sbjct: 270 APLLAYLEKDFPVIDYTKALEILQSKGEDIVWGDDINSEREQLL--TVEFGGPVFIQKYP 327

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
              ++    + P DPR     +L A      +   E++   E+   +E  +Q  K+    
Sbjct: 328 REAKAFYMKVNPEDPRTVLNADLIAP-----DGVGEIIGGSEREENYENIVQRLKEEKLP 382

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L          SG  +G +RL+  + G  ++ E I  P  
Sbjct: 383 VESYDW-YLDLRKYGSVPHSGFGLGSERLIAWICGLAHVRECIPFPRM 429


>gi|298706883|emb|CBJ25847.1| Asparaginyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 805

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/377 (16%), Positives = 108/377 (28%), Gaps = 64/377 (16%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMS-----------------LQY 51
            H R R       +  R+ +  +  ++F +  F+ I +                   L  
Sbjct: 443 AHLRPRTKMHSAAMRVRHAMAFATHKFFNDRGFLYIHTPIVTGADCEGAGEQFAVSTLLP 502

Query: 52  SPGNE--------THIRAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIF 98
             G E               T     D+  K  +     L  S + + +    +    ++
Sbjct: 503 DAGGEEGNGHAAAAGGGPPMTPAGAVDY-SKDFFARRTCLTVSGQLNVETHACS-LGDVY 560

Query: 99  CFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQN 156
            F   +R        H  EF M+E   A    +  M    + ++   A          + 
Sbjct: 561 TFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEF 620

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
               P  EP          R  N+     +         L+   A++  +  +    W D
Sbjct: 621 FETCPGGEPG------LRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVEFSVIPEWGD 674

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNAC 275
                    +      N   I+  YP    A       D +     ++    I E+    
Sbjct: 675 DLGSEHERYVAEK-VYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGS 733

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDED----FLA-CLTEMPQSSGIAMGFDRLV 330
               D  +   R ++              + ED    +L        Q +G  +GF+RLV
Sbjct: 734 QREEDLGKLTKRAKE------------MNLPEDSISWYLDLRRYGTIQHAGFGLGFERLV 781

Query: 331 MLVTGANNINEVIWTPF 347
           M  TG  NI +VI  P 
Sbjct: 782 MFATGIENIRDVIPFPR 798


>gi|257125882|ref|YP_003163996.1| asparaginyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049821|gb|ACV39005.1| asparaginyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 479

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 106/356 (29%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R+++  ++ ++F E  F+ + +  +  S       +   +T   
Sbjct: 138 AHLRPRTNAFFATFRVRSILSYAIHKFFQEKNFVYVQTPIITGSDAEGAGEMFRLTTLDI 197

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K   L  S + + +    A  +  + F   +R  +     H
Sbjct: 198 NNIPKTENGSIDFKQDFFGKEANLTVSGQLNVETFATA-FKNTYTFGPTFRAEKSNTPKH 256

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M     +I+       +            F++     +   
Sbjct: 257 AAEFWMMEPEIAFADLDVNMDVIEEMIKYIVNYVRENAKE----EMEFFNKFVDKDLFNR 312

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N + G                  + +  +  ++  W           +       
Sbjct: 313 LDTLVNNEFGRITYTE-------AIEILKNSKQKFEYEVEWGIDLQTEHERYLAEKHFKK 365

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +  +  +L A  I       +  D  E       EM 
Sbjct: 366 PV-FVTDYPKDIKAFYMKLNEDGKTVRAVDLLAPGIGEIVGGSQREDDYEILLGKINEMG 424

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K++ Y         +L          SG  +GFDR++M +TG  NI +VI  P +
Sbjct: 425 LKEEDY-------WWYLDLRKYGSVPHSGFGLGFDRMLMYITGMTNIRDVIPFPRT 473


>gi|237737416|ref|ZP_04567897.1| asparaginyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421278|gb|EEO36325.1| asparaginyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 463

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 113/359 (31%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F EN F+ + +  +  S       +  F    +
Sbjct: 122 AHLRPRTNTFSAVFRVRSVVAYAIHKFFQENGFVYVHTPIITGSDCEGAGEM--FRVTTL 179

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +++ K            +     L  S + S +   +A    I+ F   +R       
Sbjct: 180 DLNNLPKKEDGTVDNSKDFFGKETNLTVSGQLSGETFCSA-FRNIYTFGPTFRAENSNTA 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E  M+   ++++   +    +           F+      + 
Sbjct: 239 RHASEFWMIEPEIAFADLEANMELAESMVKYIIKFVMDECPE----EMEFFNNFIEKGLF 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D G                   ++G +  +   W           +     
Sbjct: 295 DKLNNVLNSDFGRLTYTE-------AIDILLKSGKKFDYPVEWGIDLQSEHERYLAEEYF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 L  YP    A       D +  +  +L A  I       +  D +E       E
Sbjct: 348 KKPV-FLTDYPKDIKAFYMKLNPDGKTVRAMDLLAPGIGEIIGGSQREDSLEILENRITE 406

Query: 292 MQEKKKIYNETYPIDEDFLACLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  K        P D +F   L        SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 407 LGMK--------PEDYEFYLDLRRFGSFPHSGYGLGFERIIMYITGMTNIRDVIPFPRT 457


>gi|167044328|gb|ABZ09006.1| putative tRNA synthetases class II (D, K and N) [uncultured marine
           crenarchaeote HF4000_APKG6C9]
          Length = 436

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 66/343 (19%), Positives = 120/343 (34%), Gaps = 58/343 (16%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQD 70
            RR   +     R+ +  S+R+YF +  F EI++  +  +   G           L    
Sbjct: 136 LRRSVLQNVFNARSNVLRSIRQYFYDQNFTEINTPKMIATATEGGAA--------LFPIF 187

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +  K  +L  SP+   K+ L    EK+F  A  +R        H  E   +++  A+  Y
Sbjct: 188 YYNKEAFLAQSPQLY-KEQLTMSFEKVFEIAPIFRAEPSRTNRHLSEAISIDFEEAYVDY 246

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             +MK    II+ A           +    N  ++     +++   +Y+  DL   +   
Sbjct: 247 NDVMKRIEQIIKQAILSI------QEFSKDNHDADFTIPEISDTIPQYSYSDLLKKIQAT 300

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESAL 248
                                   W D      + KIE    I     +  +P  P+   
Sbjct: 301 GATS-------------------QWGDDLYPEQLNKIE----ITGFYFIKDWPTGPKPFY 337

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             +   +P+ ++ F+L   ++E+ +    +    E   R       K K       ID  
Sbjct: 338 VKVNKDNPKISESFDLMYGDLEISSGSTRIEKKSELEDR------MKNKG----MKIDTF 387

Query: 309 --FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              L      +P  +G  +G +RL+M +TG  NI +  + P  
Sbjct: 388 SYHLNVFDYGVPPHAGCGIGLERLMMALTGIENIRDTTFYPRD 430


>gi|328946519|gb|EGG40659.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 465

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 121/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 142 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 193

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 194 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 252

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 253 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 311

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 312 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 349

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +      P +P      +L            E++    +   ++  + 
Sbjct: 350 PTFVVNYPAAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 404

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 405 KMNALGMDTTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 459


>gi|81299641|ref|YP_399849.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81168522|gb|ABB56862.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 462

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 99/355 (27%), Gaps = 40/355 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF----- 62
            H R R       +  RN   +++ ++F E  F+ + +  +  S       +        
Sbjct: 122 AHLRPRTNSLGAVMRVRNAAATAIHDFFQERGFLWVHTPIITASDCEGAGELFTVTNLDL 181

Query: 63  -------STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
                        QD   K  YL  S +    +++A     ++ F   +R        H 
Sbjct: 182 DKLGQSQQAPDFEQDFFGKRAYLTVSGQLEA-EIMALAFSNVYTFGPTFRAENSNTSRHL 240

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       M      ++   +  + +                        
Sbjct: 241 AEFWMVEPEMAFCDLGGDMDLAEAFLKFVFQRVSDRCSEDLEFF-----------NQRID 289

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
           +   N       ++ ++          ++A     +   W           +        
Sbjct: 290 SEVLNRAETILNNDFERVSYTDAIALLEKADRSFDYPVAWGIDLQSEHERYLAEEYFRKP 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YP    A       D +             L     E++   ++  R +   Q 
Sbjct: 350 L-IVYDYPREIKAFYMRLNDDQKTVAAM------DVLAPGIGEIIGGSQREERLDVLKQR 402

Query: 295 KKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +           +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 403 LAEANLPEENY-WWYLDLRRYGSVPHAGFGLGFERLVQFITGMGNIRDVIPFPRT 456


>gi|194754517|ref|XP_001959541.1| GF12925 [Drosophila ananassae]
 gi|190620839|gb|EDV36363.1| GF12925 [Drosophila ananassae]
          Length = 530

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/355 (16%), Positives = 115/355 (32%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   E  F EI +  +  +  +E    
Sbjct: 204 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAA-SEGGAN 262

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K+F     +R  +     H  EF  
Sbjct: 263 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 317

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                +Y    E+  +   
Sbjct: 318 LDLEMAFKYHYHEVLHT---------------IGNTFTAIFKGLRDKYAREIESVGQQYK 362

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +D    L+ P            ++AG+    ++  S    ++L   ++     +   ILD
Sbjct: 363 VDAFKFLEPPLILQFSEGVAMLREAGVETGDEEDLSTPNEKLLGRLVKAKYDTD-FYILD 421

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P +P ++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 422 KFPLAIRPFYTMPDPNNPVYSNSYDMFMRGEEILSGAQRIHDP--------EYLIERAKH 473

Query: 299 YNETYPIDED----FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 474 ----HGIDTSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 524


>gi|148988588|ref|ZP_01820021.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147925789|gb|EDK76864.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 447

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   L  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGIKHIREAIPFPRM 441


>gi|256028529|ref|ZP_05442363.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766448|ref|ZP_06525826.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718003|gb|EFD82015.1| asparaginyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 461

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  +L ++F EN F+ + +  +  S       +  F    +
Sbjct: 120 AHLRPRTNTFSAVFRVRSVLAYALHKFFQENNFVYVHTPIITGSDAEGAGEM--FRVTTL 177

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             + + K            +     L  S +    +   A    ++ F   +R       
Sbjct: 178 DMNKLPKKENGEVDFTKDFFGKSTNLTVSGQL-NVETFCAAFRNVYTFGPTFRAEYSNTA 236

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+    +++   +                F+      + 
Sbjct: 237 RHASEFWMVEPEIAFADLSANMELAEAMVKFVIKYVMDTCPE----EMEFFNSFIEKGLF 292

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
                  N + G                  +++G +      W           +     
Sbjct: 293 NKLNNVLNNEFGRITYTE-------AIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYF 345

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +  +  +L A  I       +  D  E   +    
Sbjct: 346 KKPV-FVTDYPKEIKAFYMKLNEDGKTVRAMDLLAPGIGEIIGGSQREDSYEILLK---- 400

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K+   NE     E +L          SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 401 -RMKELGLNEEDY--EFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRT 455


>gi|154280104|ref|XP_001540865.1| hypothetical protein HCAG_04705 [Ajellomyces capsulatus NAm1]
 gi|150412808|gb|EDN08195.1| hypothetical protein HCAG_04705 [Ajellomyces capsulatus NAm1]
          Length = 973

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 110/332 (33%), Gaps = 28/332 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I +  R       FIEI +  LQ S   E+    F  +     +  +  +
Sbjct: 301 SQSIFRIQSAISNLFRASLDSQGFIEIHTPKLQSSA-TESGASVFEVK-----YFTREAF 354

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +AA  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 355 LAQSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEALET 414

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           +  +          E +   +        +    L++        
Sbjct: 415 IDSVLKEIFKGIYGRYRREVDIIKNQFPHEDLVWLDETPIIPFAEGIKLLNDSGW----- 469

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP--A 254
                +Q G  ++ ++         L E I+     +     D++P    A    +    
Sbjct: 470 -----RQDGEELSVNEDLGTRDEIRLGELIKEKYHTDLLPYWDKFPKSARAHFMPWKILR 524

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
            P FT  F+++    E+ +    + D      R ++       I        E++L    
Sbjct: 525 TPDFTNSFDIFVRGQEIVSGGQRIHDEKILEQRMKE-----AGINPLAM---EEYLEGFR 576

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
              P  +G  +G +RL+ML+    NI      
Sbjct: 577 WGAPPHAGAGIGLERLLMLILKLGNIRLASLF 608


>gi|224056100|ref|XP_002194194.1| PREDICTED: aspartyl-tRNA synthetase [Taeniopygia guttata]
          Length = 547

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 116/351 (33%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 221 NQDTRLDNRIIDLRTSTSQAIFCLQSGICQLFRETLIRKGFVEIQTPKIISAA-SEGGAN 279

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 280 VFTVSYFKTSA-----YLAQSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTEFVG 334

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + D +           Q+ F  +    +     E     E   R   
Sbjct: 335 LDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR--- 391

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   ILD
Sbjct: 392 ------------LEYREGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 438

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           PA+P+ +  ++++    E+ +    + DP     R      +   I
Sbjct: 439 KYPLAVRPFYTMPDPANPKTSNSYDMFMRGEEILSGAQRIHDPQLLTER-----AKHHGI 493

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 494 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRD 541


>gi|170070850|ref|XP_001869733.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167866765|gb|EDS30148.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 538

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 118/355 (33%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+      F EI +  +  +  +E    
Sbjct: 212 NQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILAAQGFTEIHTPKIISAA-SEGGAN 270

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K+F     +R  +     H  EF  
Sbjct: 271 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 325

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                 Y     A  +  N
Sbjct: 326 LDLEMAFKYHYHEVL---------------DTIGNTFTEIFKGLRDNYAREIAAVGQQYN 370

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+ P + +        ++AG+ +  ++  S    ++L   ++     +   ILD
Sbjct: 371 VESFKFLEPPLKLEFAQAVAMLREAGVTMDDEEDLSTPSEKLLGRLVKAKYDTD-FYILD 429

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P++P+++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 430 KFPLAVRPFYTMPDPSNPKYSNSYDMFMRGEEILSGAQRIHDP--------EYLVERAKH 481

Query: 299 YNETYPIDED----FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 482 ----HAIDTSKIAAYIEAFRFGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 532


>gi|45657877|ref|YP_001963.1| asparaginyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798558|sp|Q72QT4|SYN_LEPIC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|45601118|gb|AAS70600.1| asparaginyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 435

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/348 (18%), Positives = 125/348 (35%), Gaps = 39/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           I  +  W R    ++   L  R+ +  ++R+YF E  F+ ID+  L  S   E+    FS
Sbjct: 118 ISQRHLWLRSS--KQLAILRVRDNLSFAIRKYFHERDFLLIDTPILTGS-VGESAGTLFS 174

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TE           YL  + +   +  + A   K+FC+   +R  +     H  EF M+E 
Sbjct: 175 TEYFDLG----NAYLAQTGQLYLETAIFAH-NKVFCYGPTFRAEKSKTRRHLTEFWMVEA 229

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A  ++ + +K   + ++   +                    E +  +    +    D 
Sbjct: 230 EVAFATHAENLKLQEDFVKTVIK--------------------ETVQNSFQDLKVLERDP 269

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L   ++    + Y +A +       D  W D  +    + +   +       + +YP
Sbjct: 270 APLLAYLEKDFPVIDYTKALEILQSKGEDIVWGDDINSEREQIL--TVEFGGPVFIQKYP 327

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
              ++    + P DPR     +L A      +   E++   E+   +E  +Q  K+    
Sbjct: 328 REAKAFYMKVNPEDPRTVLNADLIAP-----DGVGEIIGGSEREENYENIVQRLKEEKLP 382

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L          SG  +G +RL+  + G  ++ E I  P  
Sbjct: 383 VESYDW-YLDLRKYGSVPHSGFGLGSERLIAWICGLAHVRECIPFPRM 429


>gi|302335189|ref|YP_003800396.1| asparaginyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319029|gb|ADK67516.1| asparaginyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 467

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 112/365 (30%), Gaps = 40/365 (10%)

Query: 6   SQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETH- 58
           S+ +     H R R          R++   ++ ++F    F+ +++  +  S        
Sbjct: 115 SREFLRTQQHLRSRTNLFRAVFRVRSVAAFAIHQFFQGRGFVYVNTPIITASDAEGAGEM 174

Query: 59  --------IRAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                        TE    D+  +  +     L  S +   +   A     ++ F   +R
Sbjct: 175 FRVTTIDPANPPLTEDGKVDY-SRDFFGKATNLTVSGQLQGENF-AMSFGDVYTFGPTFR 232

Query: 106 NGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                   H  EF M+E   A       M     +++                  +  + 
Sbjct: 233 AENSNTRRHAAEFWMVEPEMAFCDLAGEMDVSEEMLKYVITYV----MDRCPDEIDMLNS 288

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
                + E  +  A+ D           D   +  +AQ AG    +   W          
Sbjct: 289 FVDKGLRERLSHVASSDFARVSY----TDAVSILQEAQAAGATFEYPVEWGVDLQTEHER 344

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +         T +  YPA   A       D +     +     I       E++   ++
Sbjct: 345 YLTERH-FRRPTFVTDYPAAIKAFYMRQNDDGKTVAAADCLVPGI------GEIIGGSQR 397

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             R +   +   ++  +     + +L        + +G  +GF+RLVM +TG +NI +VI
Sbjct: 398 EERLDVLERRIAELGMDVGQY-KYYLDLRRYGSCRHAGFGLGFERLVMYLTGVDNIRDVI 456

Query: 344 WTPFS 348
             P +
Sbjct: 457 PHPRT 461


>gi|291534318|emb|CBL07430.1| asparaginyl-tRNA synthetase [Roseburia intestinalis M50/1]
          Length = 463

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 108/356 (30%), Gaps = 43/356 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI------- 59
           H R R          R++I  ++ ++F E  F+ + +  +  S      E          
Sbjct: 123 HLRPRTNTFEAVFRVRSLIAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDMN 182

Query: 60  ----RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                   T    +D   KP  L  S +    +  A   + I+ F   +R        H 
Sbjct: 183 NLPKNPDGTVDYSKDFFNKPTNLTVSGQL-NGETYAMAFKNIYTFGPTFRAENSNTTRHA 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E  M    ++++                    F+      + E  
Sbjct: 242 AEFWMIEPEIAFADLEDDMILAESMLKYIINYV----LENAPEEMAFFNNFIDKGLLERL 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
              AN D                    ++   +  +  +W           +   +    
Sbjct: 298 QHVANSDFARVTYTE-------AVEILEKHNDKFEYKVSWGTDLQTEHERYLTEEI-FKR 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP    A       D +     +     I E+        D  +   R  + + 
Sbjct: 350 PVFVTDYPKEIKAFYMKMNDDGKTVAAVDCLVPGIGEIIGGSQREDDYDKLLARINE-LG 408

Query: 294 EKKKIYNETYPID-EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K++  +  + +D   + +        +G  +GF+R VM +TG +NI +VI  P +
Sbjct: 409 LKEE--DYQFYLDLRKYGSAR-----HAGFGLGFERCVMYLTGMSNIRDVIPFPRT 457


>gi|85713399|ref|ZP_01044402.1| asparaginyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85692778|gb|EAQ30773.1| asparaginyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 349

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 108/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------- 58
            H R R       +  RN +  ++  +F E+ ++ + +  +  S      E         
Sbjct: 8   AHLRPRTNVTGAVMRVRNTLSQAIHRFFHEHGYLWVSTPIITTSDCEGAGEMFRVSTLDL 67

Query: 59  IRAFSTEL----IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
           +    TE       QD   K  +L  S + + +    +   K++ F   +R        H
Sbjct: 68  MNVPKTEQGNVDFSQDFFGKEAFLTVSGQLNVESYACS-LSKVYTFGPTFRAENSNTSRH 126

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + +     ++++   +   ++    +  +   F +     V E 
Sbjct: 127 LSEFWMVEPEVAFADLDDVAHLAEDMLKYVFKAVLEE----RPDDMAFFEQRINKDVVER 182

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R  + D           D        +  G +  +   W           +       
Sbjct: 183 LTRMVDSDFVHM-------DYTDAIEILKNCGKKFEYPVEWGVDLQSEHERYLAEEHVGA 235

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++    +  R +   Q
Sbjct: 236 PVILK-NYPRDIKAFYMRQNKDGKTVAAM------DVLAPGIGEIIGGSAREERLDVLDQ 288

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++         +F   L        +G  +GF+RLV  VTG  NI +VI  P 
Sbjct: 289 RIAEMDLPAEEY--EFYRDLRRYGTVPHAGFGLGFERLVSYVTGMQNIRDVIPFPR 342


>gi|313904374|ref|ZP_07837751.1| asparaginyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470710|gb|EFR66035.1| asparaginyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 464

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 107/358 (29%), Gaps = 47/358 (13%)

Query: 15  HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R  L       R++   ++ ++F EN F+ + +  +  S       +  F    + 
Sbjct: 124 HLRPRTNLFQATYRVRSLCAYAIHKFFQENDFVYVHTPLITSSDAEGAGEM--FQVTTLD 181

Query: 69  QD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +             +  +     L  S +   +    A   KI+ F   +R        
Sbjct: 182 LNNIPKNEDGSVDFSQDFFKKPTNLTVSGQLYGETYAQA-FRKIYTFGPTFRAENSNTTR 240

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +  M     +++                  N F++     + +
Sbjct: 241 HAAEFWMIEPEIAFADLQDDMDCAEAMLKYIIRYV----LENAPEEMNFFNQFVDKGLLD 296

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N D G                  ++      +  +W           +   +  
Sbjct: 297 RLNHVMNSDFGRVTYTE-------AIKLLEEHNDEFEYKVSWGCDLQTEHERYLTEQVFK 349

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        D  + + R E+ 
Sbjct: 350 KP-IFVTDYPKDIKAFYMKLNDDGKTVAAADCLVPGIGEIIGGSQREEDYDKLKQRMEE- 407

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +  +    D  +L        + +G  +GF+R VM +TG +NI +V+  P +
Sbjct: 408 ------LGMDMSQYD-FYLDLRKFGTTRHAGFGLGFERCVMYLTGVSNIRDVLPFPRT 458


>gi|253580427|ref|ZP_04857692.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848157|gb|EES76122.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 463

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 104/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------I 59
            H R R          R++   ++  +F E  F+ + +  +  S      E        +
Sbjct: 122 THLRPRTNTFQAVFRVRSLCAYAIHRFFQEQGFVYVHTPLITGSDCEGAGEMFQVTTLDM 181

Query: 60  RAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
               T+        +  +     L  S + +C+    A    ++ F   +R        H
Sbjct: 182 NNVPTDDKGAVDYSQDFFGKETNLTVSGQLNCETFAQA-FRNVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M     +++                  N F+      + + 
Sbjct: 241 AAEFWMIEPECAFADLNDNMDLAEAMLKYVIRYV----LENAPEEMNFFNSFVDKGLLDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N + G                  ++   +  +   W           +   +   
Sbjct: 297 LNHVINSEFGHVTYTE-------AVELLEKNNDKFDYKVFWGCDLQTEHERYLTEEIFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +     I       +  D IE+  +   E+ 
Sbjct: 350 PV-FVTDYPKEIKAFYMKMNEDNKTVAAMDCLVPGIGEIIGGSQREDDIEKLEKRMDELG 408

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            KK+        D DF   L      + SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 409 LKKE--------DYDFYLDLRKYGSTRHSGFGLGFERCVMYLTGMGNIRDVIPFPRT 457


>gi|240144533|ref|ZP_04743134.1| asparagine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257203443|gb|EEV01728.1| asparagine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291538061|emb|CBL11172.1| asparaginyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 463

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 108/356 (30%), Gaps = 43/356 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI------- 59
           H R R          R++I  ++ ++F E  F+ + +  +  S      E          
Sbjct: 123 HLRPRTNTFEAVFRVRSLIAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDMN 182

Query: 60  ----RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                   T    +D   KP  L  S +    +  A   + I+ F   +R        H 
Sbjct: 183 NLPKNPDGTVDYSKDFFNKPTNLTVSGQL-NGETYAMAFKNIYTFGPTFRAENSNTTRHA 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E  M    ++++                    F+      + E  
Sbjct: 242 AEFWMIEPEIAFADLEDDMILAESMLKYIINYV----LENAPEEMAFFNNFIDKGLLERL 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
              AN D                    ++   +  +  +W           +   +    
Sbjct: 298 QHVANSDFARVTYTE-------AVEILEKHNDKFEYKVSWGTDLQTEHERYLTEEI-FKR 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP    A       D +     +     I E+        D  +   R  + + 
Sbjct: 350 PVFVTDYPKEIKAFYMKMNDDGKTVAAVDCLVPGIGEIIGGSQREDDYDKLLARINE-LG 408

Query: 294 EKKKIYNETYPID-EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K++  +  + +D   + +        +G  +GF+R VM +TG +NI +VI  P +
Sbjct: 409 LKEE--DYQFYLDLRKYGSAR-----HAGFGLGFERCVMYLTGMSNIRDVIPFPRT 457


>gi|295114740|emb|CBL35587.1| asparaginyl-tRNA synthetase [butyrate-producing bacterium SM4/1]
          Length = 463

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 105/357 (29%), Gaps = 45/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL-- 66
           H R R          R++I  ++ +YF E  F+ + +  +  S       +   +T    
Sbjct: 123 HLRPRTNTFQAVFRVRSLIAYAIHQYFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLA 182

Query: 67  -----------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                        QD   KP  L  S + + +    A    ++ F   +R        H 
Sbjct: 183 NVPKASDGSVDFSQDFFGKPTNLTVSGQLNAETYAMA-FRNVYTFGPTFRAENSNTTRHA 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       M    ++++                  N F++     + +  
Sbjct: 242 AEFWMIEPEMAFADLNDNMALAESMLKYVIRYV----LEHAPEEMNFFNQFIDKGLLDRL 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               N + G                  ++      +   W           +   +    
Sbjct: 298 NHVLNSEFGHVTYTE-------AVKLLEEHNDEFDYKVFWGCDLQTEHERYLTEQI-FKR 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP    A       D +     +     I E+        D  +   R ++   
Sbjct: 350 PVFVTDYPKEIKAFYMKMNEDGKTVAAMDCLVPGIGEIIGGSQREDDYEKLLARMDELGL 409

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +K+         D  F   L      + SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 410 KKE---------DYGFYLDLRKYGSVRHSGFGLGFERCVMYLTGMGNIRDVIPFPRT 457


>gi|170060018|ref|XP_001865617.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167878624|gb|EDS42007.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 524

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 118/355 (33%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+      F EI +  +  +  +E    
Sbjct: 198 NQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILAAQGFTEIHTPKIISAA-SEGGAN 256

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K+F     +R  +     H  EF  
Sbjct: 257 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 311

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                 Y     A  +  N
Sbjct: 312 LDLEMAFKYHYHEVL---------------DTIGNTFTEIFKGLRDNYAREIAAVGQQYN 356

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+ P + +        ++AG+ +  ++  S    ++L   ++     +   ILD
Sbjct: 357 VEPFKFLEPPLKLEFAQAVAMLREAGVTMDDEEDLSTPSEKLLGRLVKAKYDTD-FYILD 415

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P++P+++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 416 KFPLAVRPFYTMPDPSNPKYSNSYDMFMRGEEILSGAQRIHDP--------EYLVERAKH 467

Query: 299 YNETYPIDED----FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 468 ----HAIDTSKIAAYIEAFRFGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 518


>gi|148230913|ref|NP_001085490.1| aspartyl-tRNA synthetase [Xenopus laevis]
 gi|49119135|gb|AAH72839.1| MGC80207 protein [Xenopus laevis]
          Length = 530

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 114/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE   +  F+EI +  +  +  +E    
Sbjct: 204 NQDTRLDNRVIDLRTSTSHSVFGLQSGICQLFRETLTKKGFVEIQTPKIISAA-SEGGAN 262

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 263 VFTVSYFKTSA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 317

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + D +           Q+ F  +          E     E   R   
Sbjct: 318 LDIEMAFNYHYHEVVDEIADTMVQIFKGLQERFQTEIQTVCKQFPCEPFKFLEPTLR--- 374

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   ILD
Sbjct: 375 ------------LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 421

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+++  ++++    E+ +    + DP     R          I
Sbjct: 422 KYPLAVRPFYTMPDPQNPKYSNSYDMFMRGEEILSGAQRVHDPQLLTER-----ATHHGI 476

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 477 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRD 524


>gi|53133416|emb|CAG32037.1| hypothetical protein RCJMB04_16g4 [Gallus gallus]
          Length = 503

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 177 NQDTRLDNRVIDLRTSTSQAVFCLQSGICQLFRETLIRKGFVEIQTPKIISAA-SEGGAN 235

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 236 VFTVSYFKSSA-----YLAQSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTEFVG 290

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + D +           Q+ F  +    N     E     E   R   
Sbjct: 291 LDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQAEIQMVNKQFPCEPFKFLEPTLR--- 347

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AGI +  ++  S    ++L   ++     +   ILD
Sbjct: 348 ------------LEYREAVAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 394

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R      +   I
Sbjct: 395 KYPLAVRPFYTMPDPVNPKNSNSYDMFMRGEEILSGAQRIHDPQLLTER-----AKHHGI 449

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 450 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRD 497


>gi|222055387|ref|YP_002537749.1| asparaginyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221564676|gb|ACM20648.1| asparaginyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 461

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 48/355 (13%), Positives = 101/355 (28%), Gaps = 40/355 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  +F E  F+ + +  +  +       +   +T  +
Sbjct: 121 AHLRPRTNTFGAVFRVRSSLAQAIHRFFAERGFLYVHTPIITANDCEGAGELFRVTTLNM 180

Query: 68  IQDHI-------RKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
            +  +           +     L  S +   +    A    I+ F   +R        H 
Sbjct: 181 AKPPLKAGEVDYSGDFFAQATGLTVSGQLEGELFAQA-FSNIYTFGPTFRAENSNTARHA 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A            + ++                     +E       +  
Sbjct: 240 AEFWMIEPEMAFADLMADAALAEDFLKFLCRHVLDNC-----------TEDMRFFNDQID 288

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               +        +    +        ++A +       W           I   +    
Sbjct: 289 KGLLSRIEAVASSSFAVMEYTEAIDHLKKAAVPFTFPVEWGLDLQSEHERYITEQVVGGP 348

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              L  YP    A       D R     +L    +       E++   ++  RF+  ++ 
Sbjct: 349 V-FLINYPKDIKAFYMRQNDDGRTVAAMDLLVPKV------GEIIGGSQREERFDLLLER 401

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ++      +   +L          +G  +GF+RL+M +TG  NI +VI  P +
Sbjct: 402 MGELGINEEGL-WWYLDSRRWGSCPHAGFGLGFERLLMYLTGMENIRDVIPFPRT 455


>gi|322695409|gb|EFY87218.1| aspartate-tRNA ligase [Metarhizium acridum CQMa 102]
          Length = 913

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 118/336 (35%), Gaps = 38/336 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H   +     R+M+    R+   +  F+EI++  LQ +   E+    F       ++  
Sbjct: 275 RHPSNQALFRIRSMVTRIFRDTLEQQGFVEINTPKLQPAA-TESGAAVFKV-----NYFG 328

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           +  +L  SP+ + +  ++A   +++     +R        H  E+T L+   + E  Y +
Sbjct: 329 RNAFLAQSPQLAKQSAVSADFGRVYEVGPVFRAENSNTHRHLTEYTGLDIEMSIEHDYHE 388

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      ++             +     P  E +++                  D    
Sbjct: 389 VICIIDEFLKNVFTSVYAMPEVKEVQKRWPSKEFKWL------------------DETLI 430

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
            +        +  G  V  +D  +    R+    +    G +   +LD++PA       +
Sbjct: 431 LNFEDGIQMLRDDGRDVEMEDLSTPDEIRLGE-LVREKYGTD-YYVLDKFPASARPFYTH 488

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             P +P +T+ F+++    E+C+    + D  E R        +   I  +     ED+L
Sbjct: 489 KDPENPFWTRSFDIFIRGQEICSGGQRIHDAAELRE-----NMQAVGISEDGM---EDYL 540

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           A      P  +G  +G +R+V  +    ++      
Sbjct: 541 AAFDLGAPPHAGAGLGLERIVAWMLELGDVRYASLF 576


>gi|302695385|ref|XP_003037371.1| hypothetical protein SCHCODRAFT_64631 [Schizophyllum commune H4-8]
 gi|300111068|gb|EFJ02469.1| hypothetical protein SCHCODRAFT_64631 [Schizophyllum commune H4-8]
          Length = 544

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 103/333 (30%), Gaps = 33/333 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     +  I S  R+Y     F EI S  LQ     E+    F       +      +L
Sbjct: 236 QAIFKLQAAIGSLFRDYLSARGFTEIHSPKLQGQA-TESGASVFKVSYFKGNA-----FL 289

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+ + +  +AA  E+++     +R  +     H  EF  L+     E +   + + +
Sbjct: 290 AQSPQLAKQMCIAADFERVYEIGPVFRAEDSNTHRHLTEFMGLDLEMTIEEHYHEVMELL 349

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +  +     ++ +  +          E     E                         
Sbjct: 350 DGLFKSIFAGLKEQYKTEIDAVYRQFPAEEFKWRE---------------ETLVLSFKEA 394

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
                + G+     D  +    + L   ++     +   I+D++P           P DP
Sbjct: 395 TDMLVEDGVPREDLDDINTENEKRLGRLVKAKYDTD-YYIIDKFPMALRPFYTMPDPNDP 453

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
             +  ++ +    E+ +    + DP             + K  N      +D++      
Sbjct: 454 TLSNSYDFFMRGEEILSGAQRIHDPNLLIE------SMRAKGVNPDDM--KDYINSFRLG 505

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P   G  +G +R++ML    NNI      P  
Sbjct: 506 CPPHGGGGIGLERVLMLFLKLNNIRRASLFPRD 538


>gi|55741590|ref|NP_001006528.1| aspartyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|53133418|emb|CAG32038.1| hypothetical protein RCJMB04_16g5 [Gallus gallus]
          Length = 503

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 177 NQDTRLDNRVIDLRTSTSQAVFCLQSGICQLFRETLIRKGFVEIQTPKIISAA-SEGGAN 235

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 236 VFTVSYFKSSA-----YLAQSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTEFVG 290

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + D +           Q+ F  +    N     E     E   R   
Sbjct: 291 LDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQAEIQMVNKQFPCEPFKFLEPTLR--- 347

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AGI +  ++  S    ++L   ++     +   ILD
Sbjct: 348 ------------LEYREAVAMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 394

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R      +   I
Sbjct: 395 KYPLAVRPFYTMPDPVNPKNSNSYDMFMRGEEILSGAQRIHDPQLLTER-----AKHHGI 449

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 450 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRD 497


>gi|254577988|ref|XP_002494980.1| ZYRO0B00550p [Zygosaccharomyces rouxii]
 gi|238937870|emb|CAR26047.1| ZYRO0B00550p [Zygosaccharomyces rouxii]
          Length = 554

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 52/333 (15%), Positives = 106/333 (31%), Gaps = 29/333 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     +  + +  RE+    +F EI +  L  +  +E     F        + +   YL
Sbjct: 242 QAIFRIQAGVCALFREFLSNRKFTEIHTPKLLGAA-SEGGASVFEV-----GYFKSKAYL 295

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+F  ++L+ A  E++F     +R        H  EFT L+   A E +   + D +
Sbjct: 296 AQSPQFHKQQLIIADFERVFEIGPVFRAENSNTHRHMTEFTGLDLEMAFEEHYHEVVDLL 355

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +         K ++ +          E                        +      
Sbjct: 356 SDLFVFIFTELTKRYTKEIELVRKQYPVEEF-------------RLPKDGKMVRLAYKEA 402

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
               +  G  +   +  S    R L + +      +   ILD++P           P DP
Sbjct: 403 VALLRADGKEIGDFEDLSTENERHLGKIVREKYDTD-FYILDKFPLEVRPFYAMPDPEDP 461

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
           R++  ++ +    E+ +    + D      R +      +++        +D+       
Sbjct: 462 RYSNSYDFFVRGEEILSGAQRIHDYDLLLERMKAHGLSSEEVGL------KDYCDAFKSG 515

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +G  +G +R+VM      NI      P  
Sbjct: 516 CAPHAGGGIGLERVVMFFLDLKNIRRASLFPRD 548


>gi|322377029|ref|ZP_08051522.1| asparagine--tRNA ligase [Streptococcus sp. M334]
 gi|321282836|gb|EFX59843.1| asparagine--tRNA ligase [Streptococcus sp. M334]
          Length = 447

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|257389083|ref|YP_003178856.1| aspartyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257171390|gb|ACV49149.1| aspartyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 432

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/337 (17%), Positives = 118/337 (35%), Gaps = 46/337 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     R  +  ++RE F E    EI++  +  + G E       TEL    +  +  ++
Sbjct: 131 KAIFEIRAEVLRAVREQFRELGCTEINTPKIVAT-GTEGG-----TELFPITYFGQEAFM 184

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   + ++ +G E++F     +R  E     H  E T +++  A   + + M  C 
Sbjct: 185 NQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFADHTEAMDACE 244

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            +++ A E   +                              +DL    + P+     L 
Sbjct: 245 AVVKAAYEAVEENC----------------------QDELVALDLADEFEAPEGDFPRLT 282

Query: 198 YLQAQQ---AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           Y +A +   A   +     W D         +  ++G      +  +P+       I   
Sbjct: 283 YEEAIERINATGELDEPLVWGDDLPTEGEHALGQDVGE--HYFITDWPSEIKPFY-IMDK 339

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           D   +  F++    +EL +              FE++      +  E +    D+   + 
Sbjct: 340 DDEVSTGFDMMHPEMELVSGGQREHRYDHLVDGFEQQ-----GLDPEAF----DYYTKMF 390

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              MP  +G  +G +RL+M + G  NI E +  P  +
Sbjct: 391 KYGMPPHAGWGLGGERLIMTMLGLGNIREAVLFPRDR 427


>gi|300864096|ref|ZP_07108995.1| asparaginyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300337912|emb|CBN54141.1| asparaginyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 463

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 106/358 (29%), Gaps = 47/358 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN    ++ ++F E  F+ + +  +  S       +  FS    
Sbjct: 122 AHLRSRTNTYSAVFRVRNACAHAVHQFFQERGFLWVHTPIITASDCEGAGEM--FSVTNF 179

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                            D   KP YL  S +    +++A     ++ F   +R       
Sbjct: 180 DLKNIPRNDREQIDFTKDFFGKPAYLTVSGQLEA-EVMAMAFGNVYTFGPTFRAENSNTS 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E  M      ++   +   +        +   F+E    TV 
Sbjct: 239 RHLAEFWMIEPEMAFCDLEGDMDLAEAFLKHIFKYVLETCQE----DIEFFNERIDKTVL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
                  N       +  ++          +QA  +      W           +   L 
Sbjct: 295 ATAENIIN-------NQFERITYTEAVRLLEQADKQFEFPVKWGLDLQSEHERYLAEELF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                I+  YP    A       D +  +  ++ A  I E+               R E 
Sbjct: 348 KKPT-IVTDYPVEIKAFYMRLSDDEKTVRAMDVLAPKIGEIIGGSQREERLDVLERRIEA 406

Query: 291 EMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +   K+ +          +L          +G  +GF+R+V  +TG  NI +VI  P 
Sbjct: 407 QGMNKEDL--------WWYLDLRRYGTVPHAGFGLGFERVVQFMTGMGNIRDVIPFPR 456


>gi|227872716|ref|ZP_03991043.1| asparagine--tRNA ligase [Oribacterium sinus F0268]
 gi|227841441|gb|EEJ51744.1| asparagine--tRNA ligase [Oribacterium sinus F0268]
          Length = 462

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/369 (15%), Positives = 108/369 (29%), Gaps = 51/369 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PG 54
           +  IP         H R R          R+ +  +L  +F E  F+ + +  +  S   
Sbjct: 118 LRTIP---------HLRPRTNTFQAVFRIRSQVAFALHSFFQERGFVYVHTPIITASDTE 168

Query: 55  NETHIRAFSTELI------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
               +   +T  +             +D   K   L  S +    +  A     I+ F  
Sbjct: 169 GAGEMFQVTTLPLESVPMEKGEVQYGEDFFGKKTSLTVSGQL-NGETFAQAFRDIYTFGP 227

Query: 103 AWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R  +     H  EF M+E   A    + +M    ++++   +                
Sbjct: 228 TFRAEKSNTQRHAAEFWMIEPEMAFADLDDVMFIAEDMLKYVIQYV----LVNAPEELEF 283

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            ++     + +        +                    Q+   R  +   W       
Sbjct: 284 LNQFVDKGLLDRLNHIVESEFARVTYTE-------AVEILQKQNDRFEYKVEWGCDLQTE 336

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLD 280
               +   +       +  YP    A       D +     +     I E+        D
Sbjct: 337 HERYLTEEVYKRPV-FVTDYPKDIKAFYMKLNEDGKTVAAVDCLVPGIGEIIGGSQREDD 395

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNI 339
             + + R E+      K+  E Y   E +L        +  G  +GF+R VM +TG +NI
Sbjct: 396 YEKLKKRMEEL-----KMDLEEY---EFYLDLRRYGSTRHGGFGLGFERAVMYITGMSNI 447

Query: 340 NEVIWTPFS 348
            +V+  P +
Sbjct: 448 RDVLPFPRT 456


>gi|295089868|emb|CBK75975.1| asparaginyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 463

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 105/357 (29%), Gaps = 45/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL-- 66
           H R R          R++I  ++ +YF E  F+ + +  +  S       +   +T    
Sbjct: 123 HLRPRTNTFQAVFRVRSLIAYAIHQYFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDLA 182

Query: 67  -----------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                        QD   KP  L  S + + +    A    ++ F   +R        H 
Sbjct: 183 NVPKASDGSVDFSQDFFGKPTNLTVSGQLNAETYAMA-FRNVYTFGPTFRAENSNTTRHA 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       M    ++++                  N F++     + +  
Sbjct: 242 AEFWMIEPEMAFADLNDNMALAESMLKYVIRYV----LEHAPEEMNFFNQFIDKGLLDRL 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               N + G                  ++      +   W           +   +    
Sbjct: 298 NHVLNSEFGHVTYTE-------AVKLLEEHNDEFDYKVFWGCDLQTEHERYLTEQI-FKR 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP    A       D +     +     I E+        D  +   R ++   
Sbjct: 350 PVFVTDYPKEIKAFYMKMNEDGKTVAAMDCLVPGIGEIIGGSQREDDYEKLLARMDELGL 409

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +K+         D  F   L      + SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 410 KKE---------DYGFYLDLRKYGSVRHSGFGLGFERCVMYLTGMGNIRDVIPFPRT 457


>gi|261367260|ref|ZP_05980143.1| asparagine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282570862|gb|EFB76397.1| asparagine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 461

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 101/358 (28%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R     ++ ++F E  F  + +     S       +  F    +
Sbjct: 122 THLRPRTNTFNAAFRVRGQAAFAIHQFFHERGFTYVHTPIFTGSDCEGAGEM--FQVTTM 179

Query: 68  IQDH---------------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +                 ++P+ L  S +    + +A     ++ F   +R  +    
Sbjct: 180 DLNDIPRTEDGAVDYTKDFFKRPVNLTVSGQLEA-EAMAMALGNVYTFGPTFRAEKSYDT 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M     + +                    F++     + 
Sbjct: 239 RHAAEFWMIEPEMAFADLNTYMDTAEAMTKYVIRYL----LDNCPDELAFFNQFFDKGLI 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E     AN D                    +Q      +  +W           +   + 
Sbjct: 295 ERLELVANSDFARVSYTD-------AIELLKQNDANFQYKVSWGMDLQTEHERYLTEQIF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     ++    I       EL+   ++  R +  
Sbjct: 348 KKPV-FVTDYPKEIKAFYMRQNEDGKTVAAADMLVPGI------GELIGGSQREERLDVL 400

Query: 292 MQEKKKIYNETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +    ++       D    L       + +G  +GF+RL+M VTG  NI +VI  P +
Sbjct: 401 LARLDELGLRREDYDWYLDLRRF-GSVKHAGYGLGFERLLMYVTGIPNIRDVIPFPRT 457


>gi|195027183|ref|XP_001986463.1| GH21379 [Drosophila grimshawi]
 gi|193902463|gb|EDW01330.1| GH21379 [Drosophila grimshawi]
          Length = 533

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 116/355 (32%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   +  F EI +  +  +  +E    
Sbjct: 207 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTDQGFTEIHTPKIISAA-SEGGAN 265

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K++     +R  +     H  EF  
Sbjct: 266 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVG 320

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                +Y    EA  +   
Sbjct: 321 LDLEMAFKYHYHEVLHT---------------IGNTFTAIFKGLRDKYSREIEAVGQQYK 365

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+ P            ++AGI    ++  S    ++L   ++     +   ILD
Sbjct: 366 VEPFKFLEPPLILQFAEGVAMLREAGIETGDEEDLSTPNEKLLGRLVKAKYDTD-FYILD 424

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P++P ++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 425 KFPLSIRPFYTMPDPSNPIYSNSYDMFMRGEEILSGAQRIHDP--------EYLIERAKH 476

Query: 299 YNETYPID----EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 477 ----HNIDTTKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 527


>gi|290984147|ref|XP_002674789.1| aspartyl-tRNA synthetase [Naegleria gruberi]
 gi|284088381|gb|EFC42045.1| aspartyl-tRNA synthetase [Naegleria gruberi]
          Length = 562

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 112/332 (33%), Gaps = 31/332 (9%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
                ++ +    RE+     F EI +  L  +  +E     F        +     YL 
Sbjct: 253 AIFKIQSAMGRYFREFLYTLDFTEIHTPKLIATA-SEGGADVFKV-----GYFNGAAYLA 306

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            SP+   +  +    E++F     +R  +     H  EF  L+   A +S+     + ++
Sbjct: 307 QSPQLYKQMAIIGDLERVFEIGPVFRAEKSFTHRHLTEFVGLDLEMAIKSHYTEALEVID 366

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
            +        +  F+ +          E IT  +               N   P    + 
Sbjct: 367 KMFIYIFNRLETEFAKELEIIRAQYPFESITYNQ-------------KTNLRMPYSEAIA 413

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPR 257
           L  ++  + +A D+  +    R+L E I+     +   ++D++P           P DP 
Sbjct: 414 LLNEKHNLGLASDEDINSSQERMLGEIIKEKYNTD-FFMVDKFPMKLRPFYTMPCPEDPT 472

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
            +  +++Y    E+ +    + DP       +K   EK        P    ++       
Sbjct: 473 LSNSYDIYLRGEEISSGAQRIHDP----ELLQKVANEKGVDLTPIQP----YVDAFKYGA 524

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +G  +G +R+VML  G  N+ +    P  
Sbjct: 525 WPHAGCGIGLERIVMLYLGLGNVRKTSMFPRD 556


>gi|241668923|ref|ZP_04756501.1| tRNA synthetase, class II (D, K and N) [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254877455|ref|ZP_05250165.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254843476|gb|EET21890.1| lysyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 307

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 91/325 (28%), Positives = 144/325 (44%), Gaps = 33/325 (10%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
           + KR      +R YF   + +E+D+         +  I  F+ E +         YLQ+S
Sbjct: 6   IKKRAKYLEKIRTYFKNLEVLEVDTPLAYEFGVTDPFIDVFNIETV-----SGKRYLQSS 60

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           PE++ K+LLAAG   I+    A+R+   G LH+ EFTM+EWYR    Y QLM++  N+  
Sbjct: 61  PEYAMKRLLAAGSGSIYQICKAFRDEPCGQLHKHEFTMIEWYRVGVDYLQLMQELENLFL 120

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
                 N                  Y++  +AF ++  I       NP       L    
Sbjct: 121 ALKPNLN----------------FIYLSYHKAFEKHYKI-------NPHNISLEHLQNIV 157

Query: 202 QQ--AGIRVAHDDTWSDIFSRILIEKIEPN-LGINCCTILDRYPAPESALANI--YPADP 256
           ++    I+   + T +D    +   KIE N    +    +  Y   +SALA         
Sbjct: 158 KETVGDIQGLSNPTIADCLDILFSYKIERNLNQKDTIYFIYDYTIHQSALARKIYNQNQQ 217

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM 316
               RFE+++  IEL N   EL+D  EQ  RF  +++ +K+       ID   L C+  +
Sbjct: 218 LVAARFEVFSNGIELANGYYELIDKDEQLKRFNTDLEIRKQQNKAYLDIDYKLLNCIENI 277

Query: 317 PQSSGIAMGFDRLVMLVTGANNINE 341
           P+ SG+A+GFDRL+M +   + I +
Sbjct: 278 PECSGVALGFDRLLMSLENIDKIQD 302


>gi|154413436|ref|XP_001579748.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121913958|gb|EAY18762.1| hypothetical protein TVAG_267950 [Trichomonas vaginalis G3]
          Length = 537

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 106/334 (31%), Gaps = 34/334 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ +    RE+ +   F EI +  L  +  +E     F  +     +     YL
Sbjct: 228 QAIFRLQSKVCQFFREFLLARDFQEIHTPKLIPTA-SEGGSNVFEVK-----YFDSKAYL 281

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   +  + +G  ++F     +R  +     H  EFT L+   A ++         
Sbjct: 282 AQSPQLYKQMAVVSGMPRVFEIGPVFRAEKSFTHRHLTEFTGLDAEMAFDTNYHEALLLF 341

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
             + C      QK               E     EA A      +   +  P   +    
Sbjct: 342 QELLCTVFTRLQK---------------ECQPEIEAVASQFGEHVKELVIKPCIINFKDA 386

Query: 198 YLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                + G   +  D        + L   +    G +   ILD++PA          P D
Sbjct: 387 VKLLNENGHPEMKPDQDLDTELEKCLGRLVREKYGTD-FFILDKFPAAVRPFYTMPDPDD 445

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN-ETYPIDEDFLACLT 314
           P ++  ++++    E+ +    + +          +   KK +      P  E F     
Sbjct: 446 PMYSNSYDMFLRGEEIVSGAQRIHNSELLL-----QCAAKKGVDLSPIMPYVESF---RY 497

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             P  +G+  G DR+  L  G +N+      P  
Sbjct: 498 GAPPHAGLGCGLDRITFLFLGLHNVRRGSLFPRD 531


>gi|240146778|ref|ZP_04745379.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257201063|gb|EEU99347.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82]
          Length = 443

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 113/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  +    R++     F EI +  +   S     ++          ++ 
Sbjct: 135 RNIRERAKFRIQEGVVRGFRDFLYSQGFTEIHTPKIGAKSAEGGANL-------FRLEYF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P  LQ SP+F  +  +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 188 HRPAVLQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +               +K ++ +                    R   + L      P  
Sbjct: 247 DIMAMETGFLQYMIALLKKDYAEE-------------------LRLLGVTLPNVDKIPTV 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                    A++   ++ +          ++ +  +     +    +  YP+ +     +
Sbjct: 288 RFDEAKEKVAEKYHRQIRNPYDLEPEEEALIGQYFKEEYDAD-FVFVTHYPSKKRPFYAM 346

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               DP +T  F+L    +E+      + D  +   + E     K+ + +E     E +L
Sbjct: 347 DDPADPTYTLSFDLLYQGLEITTGGQRIHDYNKLMEKIE-----KRGMESEGM---EQYL 398

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     MP   G+ +G +RL M + G +N+ E    P  
Sbjct: 399 SVFKHGMPPHGGLGIGLERLTMKLVGEDNVRETTLFPRD 437


>gi|289168358|ref|YP_003446627.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288907925|emb|CBJ22765.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 447

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +    +            +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLDRA-PQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|262340904|ref|YP_003283759.1| asparagine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272241|gb|ACY40149.1| asparagine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 468

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 59/354 (16%), Positives = 109/354 (30%), Gaps = 27/354 (7%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
            +  H R R       +  R+ +   + +YF EN F  + +  +  S       +   +T
Sbjct: 120 RKQAHLRFRTNIFSCIMRIRHHMAFCIHQYFHENGFFYLHTPIITTSNCEGSGKMFQITT 179

Query: 65  ELIIQDHIR-------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPE 116
             + ++ I           YL  S +   +        K++ F   +R        H  E
Sbjct: 180 MDLKENSIDYTKDFFKCKTYLSVSGQLEAETAALG-LGKVYTFGPVFRAENSNTSRHLSE 238

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           F M+E   A    E+ +    + ++        K             +           +
Sbjct: 239 FWMIEPEIAFFHLEENINLAEDFLKFIIRNVLDKNMEDLLFLNEFLKKWRKKEKEHLLDK 298

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
              I   +           +L  + ++  I+  H   W         + +     I    
Sbjct: 299 LELILKFSFKRISYTEAVKILIQEEKKQNIKFFHPVVWGMDLQSEHEQYLVNKYKI--PV 356

Query: 237 ILDRYPAPESALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           I+  YP+   A       D +  +  + L+    E+               R +    +K
Sbjct: 357 IVFDYPSCIKAFYMRINNDGKTVRAMDILFPEIGEVIGGSQREERYEILLQRIKDTNTDK 416

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K+          +L          SG  +GFDRLV  +TG NNI +VI  P +
Sbjct: 417 NKL--------WWYLDTRRFGSVPHSGFGLGFDRLVQFITGMNNIRDVIPFPRT 462


>gi|195123945|ref|XP_002006462.1| GI18555 [Drosophila mojavensis]
 gi|193911530|gb|EDW10397.1| GI18555 [Drosophila mojavensis]
          Length = 533

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 57/355 (16%), Positives = 115/355 (32%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   E  F EI +  +  +  +E    
Sbjct: 207 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAA-SEGGAN 265

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K++     +R  +     H  EF  
Sbjct: 266 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVG 320

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                +Y    EA  +   
Sbjct: 321 LDLEMAFKYHYHEVLHT---------------IGNTFTAIFKGLRDKYSREIEAVGQQYK 365

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+ P            ++AGI    ++  S    ++L   ++     +   ILD
Sbjct: 366 VEPFKFLEPPLILQFAEGVAMLREAGIETGDEEDLSTPNEKLLGRLVKAKYDTD-FYILD 424

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P +P ++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 425 KFPLAIRPFYTMPDPNNPMYSNSYDMFMRGEEILSGAQRIHDP--------EYLIERAKH 476

Query: 299 YNETYPID----EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 477 ----HGIDITKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 527


>gi|168493443|ref|ZP_02717586.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183576419|gb|EDT96947.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 447

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 117/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
               +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 VAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|288818064|ref|YP_003432412.1| lysyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787464|dbj|BAI69211.1| lysyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 293

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 84/315 (26%), Positives = 136/315 (43%), Gaps = 34/315 (10%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           +     +R +F    + E+D+  LQ  P  + H+  FS +        K L+L+TSPE S
Sbjct: 7   SEFLDKVRSFFKRRGYFEVDTSILQPYPNIDPHVEPFSIDTEGLADCPKRLWLRTSPENS 66

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            KKLL+  +  IF     +R    G LH+PEFTMLEWY+  + Y+ LMK+    ++    
Sbjct: 67  MKKLLSKYQMDIFQIGKVFRKDPCGRLHRPEFTMLEWYKVGQDYKYLMKEIEEFLKY--- 123

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                             + E I +  AF  YA +            D  +        G
Sbjct: 124 -------------LGFSEDCEVIRLEHAFEEYAGV--------ILSEDEEIFKNNLIAYG 162

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
              +  + W  +F RI   ++E +LG    T +  +P+   A A +      + +RFELY
Sbjct: 163 YPFSDQEDWETLFYRIY-IEVERHLGHEKPTFITHFPSRIGAYAKVKD---GYAERFELY 218

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
              +E+ N   E     E   R +  +Q +        PIDE+ +      P  +G ++G
Sbjct: 219 IKGVEIANGWTEETSKSEIERRMKLYLQGRD------LPIDEELIKAYENFPPCAGCSIG 272

Query: 326 FDRLVMLVTGANNIN 340
            +RL M++ G N+I+
Sbjct: 273 LERLFMVLMGLNSID 287


>gi|182416525|ref|ZP_02947952.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669026|ref|ZP_04529010.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182379597|gb|EDT77079.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657374|gb|EEP54930.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 429

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/338 (17%), Positives = 121/338 (35%), Gaps = 38/338 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
              +++     +N I+ S R YF  N F EI +  +  S G E     F+      D+  
Sbjct: 121 RIPKKKAIFKIQNEIEESFRTYFKSNNFEEIHTPKIINS-GTEGGSEMFTV-----DYFG 174

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           +  +L  SP+F  + ++ AG E++F   +A+R        H  E+  L+         + 
Sbjct: 175 RRAFLAQSPQFYKQMMVGAGFERVFEVGYAYRAELHNTWRHLNEYVSLDVEMGFIKDEKD 234

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           LM    + +R   +   +                          +  NI+L   L+ P  
Sbjct: 235 LMNVEEDFLRYMFKHVKETCGEE--------------------LKLFNIELPEKLEIPRI 274

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
           P      +  ++ G +    +  ++    +  + ++     +    L  YP  +  +  +
Sbjct: 275 PLAEAQDILLREFGKKSPVGNIDNEG-EALFHKYVKETYDCD-FVFLTDYPTAKRPMYAM 332

Query: 252 -YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   TK F+L    +E+      + D    + + E+   + +   +  + +D    
Sbjct: 333 ECEDNNEMTKSFDLIYKGVEITTGGQRIHDYEMLKEKMERWGLKLE---DFAFYLD---- 385

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                MP   G A+G +R+ M +    NI E    P  
Sbjct: 386 TFKYGMPPHGGFAIGLERITMQMLDLGNIREASLFPRD 423


>gi|161528574|ref|YP_001582400.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339875|gb|ABX12962.1| aspartyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 428

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 71/370 (19%), Positives = 126/370 (34%), Gaps = 68/370 (18%)

Query: 1   MHQIPSQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDS 46
           +H +P  P    + +   R                   R+ +  SLR+  V  +FIEI +
Sbjct: 99  IHPLPVDPIGRVESNIDTRLNHRALDMRNQKTASIFKLRHYVLQSLRKTLVGKKFIEITT 158

Query: 47  M-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
              +  +     ++          ++  K  YL  SP+   K+ +  G E++F  ++ +R
Sbjct: 159 PKIIGSASEGGANL-------FSLEYFGKKAYLAQSPQLY-KEQMTIGLERVFEISNFYR 210

Query: 106 NGE-QGCLHQPEFTMLEWYRAHESYEQLMKD----CMNIIRCAAEVANQKIFSFQNVNCN 160
                   H  EFT ++   A   Y  +M       M++ +  +E   ++     +    
Sbjct: 211 AENSHTGRHLSEFTSIDIEAAFMDYNDVMDVLESLVMDVYKFTSENCKKEQEIIGHTIEV 270

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
           P S  E IT  +                             + AG +V   D   D+   
Sbjct: 271 PKSPFERITYNQCIEE------------------------LKSAGEKVEFGD---DLLDS 303

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELL 279
            L      + G      L  +P             DP  ++ F+L    +EL +    L 
Sbjct: 304 HLRIIGNNHPGF---FFLTDWPMKLKPFYIREKDEDPELSRSFDLQYGYLELSSGGTRLH 360

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           +P   ++R  ++        +     D   L      MP  SG  MG DRL+  + G +N
Sbjct: 361 NPERLKNRLREQDL------DPAQFTDH--LKAFDWGMPPHSGWGMGLDRLMTTLIGIDN 412

Query: 339 INEVIWTPFS 348
           + EV+  P  
Sbjct: 413 VREVVLYPRD 422


>gi|125972594|ref|YP_001036504.1| asparaginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256005156|ref|ZP_05430125.1| asparaginyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281416785|ref|ZP_06247805.1| asparaginyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166231663|sp|A3DBI2|SYN_CLOTH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|125712819|gb|ABN51311.1| asparaginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255990903|gb|EEU01016.1| asparaginyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281408187|gb|EFB38445.1| asparaginyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316941168|gb|ADU75202.1| asparaginyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 464

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 106/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          R+++  ++ ++F E  F+ + +  +  S       +        
Sbjct: 123 AHLRPRTNTFSAVFRVRSLLAYAIHKFFQERGFVYVHTPIITGSDAEGAGQMFKVTTLDI 182

Query: 60  -RAFS----TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                    T    +D   +   L  S +   +    A    I+ F   +R        H
Sbjct: 183 NNPPRKEDGTVDFSKDFFDRETNLTVSGQLEGETYSMA-FRNIYTFGPTFRAENSNTARH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M+   ++++                    F+     T+ + 
Sbjct: 242 AAEFWMVEPEIAFADLEDDMELAEDMLKYIINYC----LENAPEEMEFFNNFIDNTLLDR 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                + D                     +A  +  +   W +         +   +   
Sbjct: 298 LNNIVSSDFAHVTYTE-------AIDILSKADQKFEYPVKWGNDLQTEHERYLTEKVFKK 350

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
               +  YP    A       D +     +L    +       E++   ++  R +  E 
Sbjct: 351 PV-FVTDYPKDIKAFYMRLNDDNKTVAAMDLLVPGV------GEIIGGSQREERLDYLEN 403

Query: 293 QEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+            +L        + +G  +GF+R +M +TG +NI +VI  P +
Sbjct: 404 RMKELGLK--MEDYWWYLDLRRYGSTRHAGFGLGFERAIMYITGMSNIRDVIPFPRT 458


>gi|327461251|gb|EGF07584.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 465

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 123/356 (34%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 142 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 193

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 194 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 252

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 253 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDTELLKRYIAEPFKRVSYDEA- 311

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 312 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 349

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +      P +P      +L            E++    +   ++  + 
Sbjct: 350 PTFVVNYPAAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 404

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +++  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 405 KMEELGMDTSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 459


>gi|86135226|ref|ZP_01053808.1| asparaginyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85822089|gb|EAQ43236.1| asparaginyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 477

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 126/376 (33%), Gaps = 42/376 (11%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +   + H R R       +  R+ +  ++ +YF EN F  +++  +  S    
Sbjct: 106 PKKHSFEFLRENAHLRMRTNTFSAVMRVRSKLSFAVHKYFQENGFNYVNTPIITGSDAEG 165

Query: 56  ETHI---------RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
              +         +A  TE    D+      K   L  S +    +  A    K + F  
Sbjct: 166 AGEMFRVTNFEDNKAPVTEDGKIDYSKDFFGKETNLTVSGQLEA-ETFAMSLGKAYTFGP 224

Query: 103 AWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A    +  M    + I+   +   +            
Sbjct: 225 TFRAENSNTTRHLAEFWMIEPEVAFMDLDGNMDLAEDFIKSVLKDVLETCKDDLEFLDQR 284

Query: 162 FSEPEYITVAEAFARYANIDLGTTL--------DNPDQPDRHLLYLQAQQAGIRVAHDDT 213
            ++ E        +  + I+    +           +  D        ++   +   ++ 
Sbjct: 285 LTQEEKSKPQAQRSEMSLIEKLKFVVDNNFKRVSYTEAIDILRNSKPNKKKKFQFPINEW 344

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
            +D+ S      +E +    C  IL  YPA   A       D +  +  ++    I    
Sbjct: 345 GADLQSEHERFLVEKH--FKCPVILFDYPANIKAFYMRLNDDGKTVRAMDVLFPGI---- 398

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              E++   ++  RF+  +++ K +  E   +   +L          SG  +GF+RLV  
Sbjct: 399 --GEIVGGSQREERFDVLVEKMKTLDIEEKEL-WWYLDLRKFGTAVHSGFGLGFERLVQF 455

Query: 333 VTGANNINEVIWTPFS 348
            TG  NI +VI  P +
Sbjct: 456 ATGMGNIRDVIPFPRT 471


>gi|328850413|gb|EGF99578.1| hypothetical protein MELLADRAFT_40205 [Melampsora larici-populina
           98AG31]
          Length = 533

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 113/356 (31%), Gaps = 51/356 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               ++ + +  R Y     F+EI +  +Q +   E+    F
Sbjct: 203 DTRLDNRVLDLRTPVNNAIFKVQSRVCNLFRAYLDGQGFMEIHTPKIQGAA-TESGASVF 261

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             +     +  +P +L  SP+ + +  +AA  ++++  A  +R        H  EFT L+
Sbjct: 262 KLQ-----YFDQPAFLAQSPQLAKQMAIAADFDRVYEIAPVFRAENSNTYRHMTEFTGLD 316

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              + + +     D ++ +        Q   S +                        +D
Sbjct: 317 LEMSLQEHYHEAVDLLDAMFLHIFKGLQSHCSKEIEVIKSQHP---------------VD 361

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC-----CT 236
               LD   +   H      +  G  +   +       R L + I+  +  +        
Sbjct: 362 NFKFLDETLRLKHHEAIQILKDNGHAIEFGEDMGTEQERELGKLIKAKVTYHHLSPADYY 421

Query: 237 ILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           I+D++P             DP  +  ++ +    E+ +    + +P     R       K
Sbjct: 422 IIDKFPLSIRPFYTMPDAVDPTLSNSYDFFMRGEEIISGAQRIHEPNFLIER------MK 475

Query: 296 KKI---YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  +    +D   L      P  +G  +G +R+VML  G  NI +    P  
Sbjct: 476 NVGINPDDMKGYVDGFKL----GCPPHAGGGVGLERVVMLFCGLGNIRKASMFPRD 527


>gi|307708373|ref|ZP_07644840.1| asparaginyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615819|gb|EFN95025.1| asparaginyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 447

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +    +            +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLDRA-PQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|17551876|ref|NP_499089.1| aspartyl(D) tRNA Synthetase family member (drs-1) [Caenorhabditis
           elegans]
 gi|417839|sp|Q03577|SYDC_CAEEL RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3873792|emb|CAA79536.1| C. elegans protein B0464.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 531

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/349 (14%), Positives = 106/349 (30%), Gaps = 43/349 (12%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               +  I +  R       F+EI +  +  +P +E     F
Sbjct: 207 DTRLDNRVIDLRTPTSHAIFRIQAGICNQFRNILDVRGFVEIMAPKIISAP-SEGGANVF 265

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                         YL  SP+   +  +A   EK++     +R  +     H  EF  L+
Sbjct: 266 EVSYFKGSA-----YLAQSPQLYKQMAIAGDFEKVYTIGPVFRAEDSNTHRHMTEFVGLD 320

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +   + + +  +        Q+ +  +          E     E        D
Sbjct: 321 LEMAFNFHYHEVMETIAEVLTQMFKGLQQNYQDEIAAVGNQYPAEPFQFCEPPLILKYPD 380

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++ GI +  +D  S    + L + ++     +   +LD++
Sbjct: 381 ---------------AITLLRENGIEIGDEDDLSTPVEKFLGKLVKEKYSTD-FYVLDKF 424

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P             D R++  ++++    E+ +    + D      R +    +  KI  
Sbjct: 425 PLSVRPFYTMPDAHDERYSNSYDMFMRGEEILSGAQRIHDADMLVERAKHHQVDLAKI-- 482

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 + ++       P  +G  +G +R+ ML  G +NI      P  
Sbjct: 483 ------QSYIDSFKYGCPPHAGGGIGLERVTMLFLGLHNIRLASLFPRD 525


>gi|255524356|ref|ZP_05391313.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187481|ref|ZP_06855876.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255511913|gb|EET88196.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048003|gb|EFG87442.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 427

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/339 (17%), Positives = 118/339 (34%), Gaps = 42/339 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
            + + R     +  I ++ REY ++N F EI +   L  S    +       E+   ++ 
Sbjct: 121 RNPKTRAAFKVQQEIVTAFREYLLQNDFSEIHTPKILGASTEGGS-------EVFTINYF 173

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYE 130
            K  +L  SP+F  + ++ AG EK+F  A A+R        H  E+  L+          
Sbjct: 174 DKRAFLAQSPQFFKQMMVGAGFEKVFEIAPAYRAELHNTYRHLNEYISLDLEMGFIKDEN 233

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M      +R   +   +                      +      +++L   ++ P 
Sbjct: 234 DIMDLEEGFMRHLFQHLRKTC--------------------QKELEMYDVNLPEKVEIPR 273

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
            P      +  ++ G R    +  ++    +  + I+     +    L  YP  +  +  
Sbjct: 274 IPLAEAHKILLEKYGKRSPVGNIDAEG-EELFAKYIKEKYDSD-FVFLTAYPVKKRPMYA 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
           +   D   TK F+L    +E+      + D    +        +K     E Y     +L
Sbjct: 332 MPDED-GMTKSFDLIYKGLEITTGGQRIHDYEMLKE-----NIKKFGFNPEDYG---FYL 382

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G+A+G +R+ M +   +NI E    P  
Sbjct: 383 ESFRYGMPPHGGLAIGLERITMKILNLSNIREATLLPRD 421


>gi|291536653|emb|CBL09765.1| aspartyl-tRNA synthetase, archaeal type [Roseburia intestinalis
           M50/1]
          Length = 443

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 113/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  +    R++     F EI +  +   S     ++          ++ 
Sbjct: 135 RNVRERAKFRIQEGVVRGFRDFLYSQGFTEIHTPKIGAKSAEGGANL-------FRLEYF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P  LQ SP+F  +  +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 188 HRPAVLQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +               +K ++ +                    R   + L      P  
Sbjct: 247 DIMAMETGFLQYMIALLKKDYAEE-------------------LRLLGVTLPNVDKIPTV 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                    A++   ++ +          ++ +  +     +    +  YP+ +     +
Sbjct: 288 RFDEAKEKVAEKYHRQIRNPYDLEPEEEALIGQYFKEEYDAD-FVFVTHYPSKKRPFYAM 346

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               DP +T  F+L    +E+      + D  +   + E     K+ + +E     E +L
Sbjct: 347 DDPADPTYTLSFDLLYQGLEITTGGQRIHDYNKLMEKIE-----KRGMESEGM---EQYL 398

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     MP   G+ +G +RL M + G +N+ E    P  
Sbjct: 399 SVFKHGMPPHGGLGIGLERLTMKLVGEDNVRETTLFPRD 437


>gi|315303833|ref|ZP_07874321.1| asparaginyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313627794|gb|EFR96439.1| asparaginyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 430

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 105/357 (29%), Gaps = 58/357 (16%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F++ID   L   +P         
Sbjct: 114 MDHRHLWLRSS--RQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFEEDAFLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPFSEPEYITVAEAF 174
              A    E  +K   N +    +                 +      +    IT  E  
Sbjct: 224 PEMAFYKLEDSLKVQENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTE-- 281

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                                       + G     D  W D F       I  +     
Sbjct: 282 ----------------------AIDLLHKLGFD---DIVWGDDFGAPHETAIADS--FEK 314

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQ 293
              +  YP            +        +   ++       E++   E+ H  E  + +
Sbjct: 315 PVFITHYPKAIKPFYMPEDPENDQV----VLCADMIAPEGYGEIIGGSERIHDLETLQAR 370

Query: 294 EKK-KIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K   +  E Y     ++          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 371 MKDFDLDQEAY---SWYIDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRL 424


>gi|307705989|ref|ZP_07642813.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307620462|gb|EFN99574.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 447

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +    +            +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLDRA-PQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|331266013|ref|YP_004325643.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682685|emb|CBZ00302.1| aspartyl/asparaginyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 447

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 120/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +    +            +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLDRA-PQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVINYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + + +++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMEELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|313207030|ref|YP_004046207.1| asparaginyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312446346|gb|ADQ82701.1| asparaginyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022576|gb|EFT35603.1| asparaginyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325335533|gb|ADZ11807.1| Aspartyl/asparaginyl-tRNA synthetase [Riemerella anatipestifer
           RA-GD]
          Length = 482

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 124/378 (32%), Gaps = 46/378 (12%)

Query: 5   PSQPWWNR---DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R          R+ +  ++ ++F +NQF  I++  +  +    
Sbjct: 111 PKRHTLEKLREQAHLRFRTNLFGAVFRVRSAVSFAIHQFFNQNQFFYINTPIITGADAEG 170

Query: 56  ETHIRAFSTELIIQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCF 100
              +  F       +             +  +     L  S +    +  A G  +++ F
Sbjct: 171 AGEM--FGVSNFDLNKVPKNEDGEVDYTQDFFGKKTNLTVSGQLEA-ETAAMGLGRVYTF 227

Query: 101 AHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A  + E  +    + ++   +           +  
Sbjct: 228 GPTFRAENSNTTRHLAEFWMVEPEVAFNNLEDNIDLAESFLKYVIQYVLDHCKDDLELLD 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTL--------DNPDQPDRHLLYLQAQQAGIRVAHD 211
             F+E +     +  A+   I+    +           +  +  L     ++   +   +
Sbjct: 288 KRFAEEQKQKPEKDRAKEGLIEKLENVVKKRFKRVSYTEAIEILLNSKDNKKGKFQFPVE 347

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
              +D+ S      +E +    C  +L  YP    A       D +     ++    I  
Sbjct: 348 KWGADLQSEHERYLVEKH--FECPVVLFDYPKEIKAFYMRLNEDQKTVAAMDVLFPGI-- 403

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
                E++   ++  R E   Q+   +  + + +   +L          +G  +G +RLV
Sbjct: 404 ----GEIIGGSQREERLEVLKQKMADMNVDEHEL-WWYLDTRKFGSVPHAGFGLGLERLV 458

Query: 331 MLVTGANNINEVIWTPFS 348
           + VTG  NI +VI  P +
Sbjct: 459 LFVTGMTNIRDVIPFPRT 476


>gi|312373653|gb|EFR21355.1| hypothetical protein AND_17160 [Anopheles darlingi]
          Length = 541

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 113/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+      F EI +  +  +  +E    
Sbjct: 215 NQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDVLTAKGFTEIHTPKIISAA-SEGGAN 273

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K+F     +R  +     H  EF  
Sbjct: 274 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 328

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                 Y     A  +  N
Sbjct: 329 LDLEMAFKYHYHEVL---------------DTIGNTFTEMFKGLRDSYAKEIAAVGQQYN 373

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+ P + +        ++AG+++  ++  S    ++L   ++     +   ILD
Sbjct: 374 VEPFKFLEPPLKLEFAQAVAMLREAGVQMDDEEDLSTPSEKLLGRLVKAKYDTD-FYILD 432

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P +PR++  ++++    E+ +    + DP     R      +   I
Sbjct: 433 KFPLAVRPFYTMPDPTNPRYSNSYDMFMRGEEILSGAQRIHDPDYLIER-----AKLHAI 487

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                     ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 488 DLSKI---AAYIDAFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 535


>gi|303233071|ref|ZP_07319746.1| asparagine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480846|gb|EFL43931.1| asparagine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 479

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/363 (15%), Positives = 107/363 (29%), Gaps = 37/363 (10%)

Query: 6   SQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           S+ +     H R R          R++   ++  +F E  F+ + +  +  S       +
Sbjct: 128 SREFLRTQQHLRSRTNLFRAIFRVRSVAAFAIHSFFQERGFVYVHTPIITSSDAEGAGEM 187

Query: 60  RAFSTELIIQ------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              +T  +              D    P  L  S +   +   A     ++ F   +R  
Sbjct: 188 FKVTTFDLEHVPTKDGAVDYSQDFFSAPTSLTVSGQLEAENF-AMSFGDVYTFGPTFRAE 246

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                 H  EF M+E   A    E  M     +++       +            F+   
Sbjct: 247 NSNTRRHAAEFWMVEPEMAFCDLEGYMDVAEAMLKYVISYVMKTC----PDEMAMFNSFV 302

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + E      + D           D   +   AQ+ G    +   W           +
Sbjct: 303 DKGLEERLQHVVSSDFARVSY----TDAIDILKAAQKQGTTFKYPVEWGVDLQTEHERYL 358

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                     +   YPA   A       D +     +     I       E++   ++  
Sbjct: 359 TEVHFKKPTFVC-DYPAAIKAFYMRMNEDGKTVAAADCLVPGI------GEIIGGSQREE 411

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R +K  +    +  E     + +           +G  +GF+RLVM +TG +NI +V+  
Sbjct: 412 RLDKLTKRIHDLGMEPEQY-KYYCDLRKYGTCHHAGFGLGFERLVMYLTGVDNIRDVLPH 470

Query: 346 PFS 348
           P +
Sbjct: 471 PRT 473


>gi|225017738|ref|ZP_03706930.1| hypothetical protein CLOSTMETH_01667 [Clostridium methylpentosum
           DSM 5476]
 gi|224949531|gb|EEG30740.1| hypothetical protein CLOSTMETH_01667 [Clostridium methylpentosum
           DSM 5476]
          Length = 464

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/360 (13%), Positives = 108/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+    ++ ++F E  F+   +  +  S       +  F    +
Sbjct: 123 AHLRPRTNTFSAVFRVRSAAAFAIHKFFNERGFVYSHTPIITSSDAEGAGEM--FRVTTL 180

Query: 68  IQDH----------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
                           +  +     L  S +    + +A    K + F   +R  +    
Sbjct: 181 DPKAPPLNEDGTVDFTQDFFEKPTSLTVSGQLEA-ECMAMAFGKTYTFGPTFRAEKSNTP 239

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M    ++I+       +               PE +   
Sbjct: 240 RHAAEFWMIEPEIAFADLQDDMDLARDMIKSVLSYVLETC-------------PEDMAFF 286

Query: 172 EAFARYANIDLGTTLDNPDQ--PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
            A      I+   +L   D             ++   +  +   W           +   
Sbjct: 287 NAHYDKGLIERLNSLIESDFGHITYTEAIEILEKHKEKFEYPVHWGVDLQTEHERFLTEE 346

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
           +       +  YP    A       D +     ++    +       E++   ++  R +
Sbjct: 347 VFKKP-IFVTDYPKEIKAFYMRLNDDGKTVAAVDMLVPGV------GEIIGGSQREERLD 399

Query: 290 KEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +   +++  +       +L        + +G  +GF+RL+M +TG +NI +++  P +
Sbjct: 400 VLLARMEELGLQPEDY-SWYLDLRRYGGSKHAGFGLGFERLIMYMTGVSNIRDMLPFPRT 458


>gi|299821670|ref|ZP_07053558.1| asparagine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817335|gb|EFI84571.1| asparagine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 430

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 97/351 (27%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F    FI+ID   L   +P         
Sbjct: 114 MDHRHLWLRSN--RQHAIMKIRNEIIRASYEFFNNEGFIKIDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFDEDAFLSQSGQLYMEAAAMA-FGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E  +K     +    +                      +   +        D
Sbjct: 224 PEMAFYQLEDSLKVQEQYVAFLVKAV--------------------LDNCKLELERLGRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +           R       ++       D  W D F       I  +        +  Y
Sbjct: 264 VSVLESMTAPFPRITYTEAIEKLHELGFDDIEWGDDFGAPHETAIADS--FEKPVFITHY 321

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELC---NACDELLDPIEQRHRFEKEMQEKKKI 298
           P            D                       + + D      R ++      ++
Sbjct: 322 PKAIKPFYMPEDPDNEQVVLCADMIAPEGYGEIIGGSERIHDLGVLLERMKE-----HEL 376

Query: 299 YNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + Y     ++          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 377 DEKAY---SWYIDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRL 424


>gi|293374948|ref|ZP_06621244.1| asparagine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325844314|ref|ZP_08168090.1| asparagine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292646425|gb|EFF64439.1| asparagine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489181|gb|EGC91563.1| asparagine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 463

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 105/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++  YF E  F+ + +  +  S       +  F    +
Sbjct: 122 AHLRPRTNLFSAVFRVRSLVAYAIHSYFQEKNFVYVHTPIITGSDAEGAGEM--FQVTTL 179

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +            ++  +     L  S +   +    A    ++ F   +R       
Sbjct: 180 DFNNVPRTEEGAVDFKQDFFAKSTNLTVSGQLEAETFALA-LRDVYTFGPTFRAENSNTQ 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M     +I+                    F++     V 
Sbjct: 239 RHAAEFWMIEPEIAFADLQDDMDLAEGMIKYIINYV----LENAPEEMKFFNQFVSKGVL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     A  D                     +A  +  +  +W    S      +   + 
Sbjct: 295 DRVKAVAESDFKRLPYTE-------AIEILLKADKKFENPVSWGIDLSTEHERYLTDEVF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    +       EL+   ++  R E  
Sbjct: 348 KAPV-FVTDYPKDIKAFYMRLNDDQKTVAAMDLLVPGV------GELIGGSQREERLEIL 400

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            Q   +I      +D           + +G  +GF+R++M +TG  NI +V+  P +
Sbjct: 401 EQRMDEIGVPKEELDWYLDLRRYGGVKHAGFGLGFERMIMYITGVENIRDVVPFPRT 457


>gi|253701972|ref|YP_003023161.1| asparaginyl-tRNA synthetase [Geobacter sp. M21]
 gi|251776822|gb|ACT19403.1| asparaginyl-tRNA synthetase [Geobacter sp. M21]
          Length = 461

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 98/358 (27%), Gaps = 46/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +   +  +F E  F+ + +  +  +       +  F    +
Sbjct: 121 AHMRVRSNTFGAVFRVRSALAQEVHRFFAERGFLYVHTPIITANDCEGAGEL--FRVTTL 178

Query: 68  IQD---------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
             +            +  +     L  S +   +    A    I+ F   +R        
Sbjct: 179 DLNNPPRVEGEIDFAQDFFAKATGLTVSGQLEGELFAQA-FSDIYTFGPTFRAENSNTAR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A              ++     A                         
Sbjct: 238 HAAEFWMIEPEMAFADLSDDADLAEAFLKRLCRFALDNCDEDMRF-------FNTQIDKG 290

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              R   +   +      + D      + ++A +       W           +   +  
Sbjct: 291 LIERIEGVAQASFA----RMDYGEAIERLKKAPVSFQFPVEWGLDLQSEHERYLTEQVVG 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
                +  YP    A       D R     +L    +       E++   ++  R E  +
Sbjct: 347 GPV-FIMNYPKEIKAFYMRLNDDGRTVAAMDLLVPKV------GEIIGGSQREERLEPLI 399

Query: 293 -QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K+   +        +L          +G  +GF+RL+M +TG  NI +VI  P +
Sbjct: 400 GRMKEVGIDPESL--SWYLDTRRWGSTPHAGFGLGFERLIMYLTGMENIRDVIPFPRT 455


>gi|308751665|gb|ADO45148.1| Lysine--tRNA ligase [Hydrogenobacter thermophilus TK-6]
          Length = 299

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 84/315 (26%), Positives = 136/315 (43%), Gaps = 34/315 (10%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           +     +R +F    + E+D+  LQ  P  + H+  FS +        K L+L+TSPE S
Sbjct: 13  SEFLDKVRSFFKRRGYFEVDTSILQPYPNIDPHVEPFSIDTEGLADCPKRLWLRTSPENS 72

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            KKLL+  +  IF     +R    G LH+PEFTMLEWY+  + Y+ LMK+    ++    
Sbjct: 73  MKKLLSKYQMDIFQIGKVFRKDPCGRLHRPEFTMLEWYKVGQDYKYLMKEIEEFLKY--- 129

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                             + E I +  AF  YA +            D  +        G
Sbjct: 130 -------------LGFSEDCEVIRLEHAFEEYAGV--------ILSEDEEIFKNNLIAYG 168

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
              +  + W  +F RI   ++E +LG    T +  +P+   A A +      + +RFELY
Sbjct: 169 YPFSDQEDWETLFYRIY-IEVERHLGHEKPTFITHFPSRIGAYAKVKD---GYAERFELY 224

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
              +E+ N   E     E   R +  +Q +        PIDE+ +      P  +G ++G
Sbjct: 225 IKGVEIANGWTEETSKSEIERRMKLYLQGRD------LPIDEELIKAYENFPPCAGCSIG 278

Query: 326 FDRLVMLVTGANNIN 340
            +RL M++ G N+I+
Sbjct: 279 LERLFMVLMGLNSID 293


>gi|309799388|ref|ZP_07693629.1| asparaginyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116986|gb|EFO54421.1| asparaginyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 447

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEYENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVINYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + + +++  +
Sbjct: 340 ADIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMEELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|218262591|ref|ZP_03476996.1| hypothetical protein PRABACTJOHN_02675 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223300|gb|EEC95950.1| hypothetical protein PRABACTJOHN_02675 [Parabacteroides johnsonii
           DSM 18315]
          Length = 373

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 82/243 (33%), Gaps = 32/243 (13%)

Query: 1   MHQIP---------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +  YR+R              +KR  +  ++R    E  
Sbjct: 142 LKPLPVVKYKDGVAYDGFNDPELRYRQRYVDLVVNDGVKNIFMKRAAVIKTMRTALDEAG 201

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ  PG  +  R F T     + +   LYL+ + E   K+L+  G E ++  
Sbjct: 202 YTEVETPILQSIPGGAS-ARPFITH---HNSLDIGLYLRIATELYLKRLIVGGFEGVYEI 257

Query: 101 AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
              +RN      H PEFT +E Y  ++ Y  +M     ++       N    S  +    
Sbjct: 258 GKNFRNEGMDRTHNPEFTCMELYVQYKDYNWMMSFTEQLLERICIAVNGTHESVVDGKTI 317

Query: 161 PFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            F      + + +A       DL              +    ++  + +        +  
Sbjct: 318 NFKAPYRRLPILDAIKEKTGYDLNG-------KSEDEIRAICKELNLEIDETMGKGKLID 370

Query: 220 RIL 222
            I 
Sbjct: 371 EIF 373


>gi|260889462|ref|ZP_05900725.1| asparagine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260860873|gb|EEX75373.1| asparagine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 462

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 106/356 (29%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R+++  ++ ++F E  F+ + +  +  S       +   +T   
Sbjct: 121 AHLRPRTNAFFATFRVRSILSYAIHKFFQEKNFVYVQTPIITGSDAEGAGEMFRLTTLDI 180

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K   L  S + + +    A  +  + F   +R  +     H
Sbjct: 181 NNVPKTENGSIDFKQDFFGKEANLTVSGQLNVETFATA-FKNTYTFGPTFRAEKSNTPKH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M     +I+       +            F++     +   
Sbjct: 240 AAEFWMMEPEIAFADLDVNMDVIEEMIKYIVNYVRENAKE----EMEFFNQFVDKDLFNR 295

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N + G                  + +  +  ++  W           +       
Sbjct: 296 LDTLVNNEFGRITYTE-------AIEILKNSKQKFEYEVEWGIDLQTEHERYLAEKHFKK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +  +  +L A  I       +  D  +       EM 
Sbjct: 349 PV-FVTDYPKDIKAFYMKLNEDGKTVRAVDLLAPGIGEIVGGSQREDDYDVLLGKIHEMG 407

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K++ Y         +L          SG  +GFDR++M +TG  NI +VI  P +
Sbjct: 408 LKEEDY-------WWYLDLRKYGSVPHSGFGLGFDRMLMYITGMTNIRDVIPFPRT 456


>gi|71020373|ref|XP_760417.1| hypothetical protein UM04270.1 [Ustilago maydis 521]
 gi|46100086|gb|EAK85319.1| hypothetical protein UM04270.1 [Ustilago maydis 521]
          Length = 562

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 111/360 (30%), Gaps = 46/360 (12%)

Query: 2   HQIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY 51
             +P       D     R                + +    REY     F+EI +  LQ 
Sbjct: 230 RPLPPIAL---DTRLDNRVLDLRTTTNQAIFRLTHGVCKLFREYLDSLDFVEIHTPKLQG 286

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
           +   E+    F        + +   +L  SP+ + +  +AA   +++     +R  +   
Sbjct: 287 AA-TESGSSVFKV-----SYFKGQAFLAQSPQLAKQMAIAADFGRVYEIGPVFRAEDSNT 340

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EFT L+   A + +   + D ++ +                          Y   
Sbjct: 341 HRHMTEFTGLDLEMAFDEHYHEVVDVLDGLFTF---------------IFRELPKRYRKE 385

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            +A  R    D     +   +          ++ G  +   +  S    R L   +    
Sbjct: 386 IDAVKRQYPCDEFLLPEKTVRLQYKDAIALLRENGKELGDLEDLSTEMERTLGGLVREKY 445

Query: 231 GINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   +LD++P           PAD +++  ++ +    E+ +    + D      R  
Sbjct: 446 KTD-FFMLDKFPLEIRPFYTMPDPADNKYSNSYDFFMRGQEILSGAQRVHDAAFLEKRMA 504

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +       I  E+    + ++       P  +G  +G +R+VM   G  NI      P  
Sbjct: 505 E-----FGIPVESM---KHYVEAFRLGCPPHAGGGIGLERVVMFYLGLGNIRRASMFPRD 556


>gi|307595594|ref|YP_003901911.1| asparaginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307550795|gb|ADN50860.1| asparaginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 429

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 56/346 (16%), Positives = 116/346 (33%), Gaps = 36/346 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R    L  R+ +  ++ E+F    + E+       +   E     F 
Sbjct: 113 LDVRHLWIRSR--RMWAILRVRHTVFGAIHEFFRSRGYYEVQGPMFVSAAV-EGGATLFP 169

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +       R+ +YL  S +F  + L+    EK++  A ++R        H  EF   E 
Sbjct: 170 VKYFD----REDVYLTQSSQFYLEVLIY-TLEKVYTVAPSFRAEPSRTRRHLTEFWHAEA 224

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   ++ L+    ++I        ++                     +   +  N D 
Sbjct: 225 EEAWLQFDGLLNLLEDLITYIVNKVLEE--------------------RQDELKLLNRD- 263

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L+N   P   + Y +A +       +  W D         +   +  +   +L  +P
Sbjct: 264 TKILENVKPPFYRVSYDEAIEILQSKGLNIKWGDDIGADEERVL--TMQFDKPILLHHFP 321

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
               A  +        ++     + ++       E++   E+ + +E+ + + KK   + 
Sbjct: 322 EQVKAFYHRNDP----SRPGTTLSVDVLAPEGYGEIVGGGERIYDYEELLSKIKKFGLKP 377

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              D             +G  +G DRLVM V G ++I + +  P  
Sbjct: 378 EDYDWYLDLRRYGSVPHAGFGLGVDRLVMWVCGLDHIRDALPFPRD 423


>gi|321473938|gb|EFX84904.1| hypothetical protein DAPPUDRAFT_99304 [Daphnia pulex]
          Length = 468

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/355 (16%), Positives = 122/355 (34%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N++     R               +  +    RE   + +F+EI +  +  +  +E    
Sbjct: 142 NQETRLDNRVLDLRTPTNQAIFRIQAAVCRLFREALDQRKFVEIHTPKIISAA-SEGGAN 200

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  EK++     +R  +     H  EF  
Sbjct: 201 VFTVSYFKGSA-----YLAQSPQLYKQMAIAADFEKVYTIGAVFRAEDSNTHRHLTEFVG 255

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A  S+   + D + ++        QK    +    N     E  T  +   R   
Sbjct: 256 LDLEMAFHSHYHEVLDTIGVVLTEVFRGLQKDCMQEIATVNRQFPSEPFTFLDPPLR--- 312

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        +QAG ++  +D  S    ++L   ++     +   ILD
Sbjct: 313 ------------LEFPEAVEMLRQAGEQIGDEDDLSTPMEKLLGRLVKAKYDTD-FYILD 359

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P + +++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 360 KYPLAVRPFYTMPDPNNKKYSNSYDIFMRGEEIMSGAQRIHDP--------EYLSERAKH 411

Query: 299 YNETYPID----EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID    + ++       P  +G  +G +R+ ML  G +NI +    P  
Sbjct: 412 ----HGIDLSKIKAYIDSFRYGCPPHAGGGIGMERVAMLFLGLDNIRKTSMFPRD 462


>gi|330924413|ref|XP_003300630.1| hypothetical protein PTT_11927 [Pyrenophora teres f. teres 0-1]
 gi|311325146|gb|EFQ91278.1| hypothetical protein PTT_11927 [Pyrenophora teres f. teres 0-1]
          Length = 1041

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 107/331 (32%), Gaps = 27/331 (8%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               ++ I    R       FIEI +  LQ     E+    F       D+  +  +L  
Sbjct: 374 IFRIQSGICRLFRNQLDSEGFIEIHTPKLQG-GATESGASVFKI-----DYFGRGAFLAQ 427

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+ + +  ++A   +++     +R        H  E+T L+     + +   +   ++ 
Sbjct: 428 SPQLAKQMAISADFGRVYEIGAVFRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDR 487

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
              A      + +  +          E +   +        D    L+     D      
Sbjct: 488 TFKAIFKGIYEQYRPEIEVIKKHFPHEDLVWLDETPIIPFADAVRMLNESGWRDDD---- 543

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD-PRF 258
                G  +  ++         L   I+  LG +   ILD++PA       +   + P  
Sbjct: 544 -----GKELDVNEDLGTRDEVQLGRVIKQKLGTD-YYILDKFPANARPFYAMNDPNNPNV 597

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           T  F+++    E+ +    + D      +       K K+   +    ED++       P
Sbjct: 598 TNSFDIFCRGQEILSGGQRIHDADMLLEKM-----RKLKVDPSSM---EDYIQAFQWGAP 649

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              G  +G +R++ML+    NI      P  
Sbjct: 650 PHGGGGIGLERILMLMMNLGNIRHASMFPRD 680


>gi|330797835|ref|XP_003286963.1| hypothetical protein DICPUDRAFT_31743 [Dictyostelium purpureum]
 gi|325083055|gb|EGC36518.1| hypothetical protein DICPUDRAFT_31743 [Dictyostelium purpureum]
          Length = 506

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 53/330 (16%), Positives = 113/330 (34%), Gaps = 25/330 (7%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               ++ + +  RE+     F EI S  +  +  +E+    F        +     YL  
Sbjct: 194 IFRIQSAVCALFREFLSAKDFTEIHSPKIISTA-SESGASVFK-----LGYFNTHAYLAQ 247

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+F  +  +A+  +++F  A  +R        H  EF  L+   A + +   + D ++ 
Sbjct: 248 SPQFYKQMAIASDFDRVFEIAPVFRAENSNTHRHLTEFVGLDMEMAFKDHYHEVLDTLDE 307

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           + C      +  F+ +    N     E         R+   +    L    +  +   Y+
Sbjct: 308 MMCFIFKGLESRFNKELETINGQYPFEPFKFTYPSPRFTFDEAAKFLAEEAELLKDETYI 367

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
                      ++ +S    + L + I+   G++   +   +           P +P   
Sbjct: 368 V---------QNNDFSTRQEKKLGQIIKKKFGVDFFIVDKFHTEVRPFYTMPDPNNPGLA 418

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
             ++L+    E+C+    + D      +  +E  +   I          ++        Q
Sbjct: 419 NAYDLFMRGEEICSGAQRIHD-----AKLLEENAKHHGINVADIQ---SYIDSFKFGCSQ 470

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +G  +G +R+VML  G  NI +    P  
Sbjct: 471 HAGGGVGLERVVMLYLGIFNIRKTSLFPRD 500


>gi|258575071|ref|XP_002541717.1| lysyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237901983|gb|EEP76384.1| lysyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 502

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 7/146 (4%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           V H   W  +        IE        + +  +P   S LA  +       +RFE + C
Sbjct: 337 VFHTPNWGGLVGE----FIEETC--INPSFITGHPQMMSPLAKYHRDHVGLCERFEAFVC 390

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGF 326
             E+ NA  EL DP +QR RFE++ ++K +  +E   +DE+F   L   +P + G  +G 
Sbjct: 391 KKEIVNAYTELNDPFDQRLRFEEQARQKAQGDDEAQLVDENFCTSLEYGLPPTGGWGLGI 450

Query: 327 DRLVMLVTGANNINEVIWTPFSQSNQ 352
           DRLVM +T   +I EV+  PF +  +
Sbjct: 451 DRLVMFLTDNYSIKEVLAFPFMKDEK 476



 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 17/104 (16%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +HQIPS+ +  +D    YR+R              + R+ + S +R YF E  F+E+++ 
Sbjct: 223 LHQIPSEHYGFKDQEQRYRQRYLDLIMNDKSRNVFVTRSKMISYIRRYFDERDFVEVETP 282

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
            +    G  T  + F T     + +   L+++ +PE   K L+ 
Sbjct: 283 MMNAIAGGAT-AKPFITH---HNELDMNLFMRIAPELYLKMLIV 322


>gi|313625399|gb|EFR95176.1| lysyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 117

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 1/116 (0%)

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            +  +P   S LA     D RFT RFEL+    E  NA  EL DPI+QR RFE +M+E++
Sbjct: 1   FVYGHPVEISPLAKKNKEDERFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKERE 60

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           +  +E + +D DFL  L   +P + G+ +G DRLVML+T A +I +++  P  +  
Sbjct: 61  QGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKHR 116


>gi|291565884|dbj|BAI88156.1| asparaginyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 463

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 103/357 (28%), Gaps = 45/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN   +++ ++F E  F+ I +  +  S       +  FS   +
Sbjct: 122 AHLRSRTNTYGAVFRVRNACAAAVHQFFQERGFLWIHTPIITASDCEGAGEL--FSVTSL 179

Query: 68  IQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +                  K  +L  S +    +++A     ++ F   +R       
Sbjct: 180 DLNNLPLTDTKAIDFSQDFFGKRAFLTVSGQLEA-EIMALAFGNVYTFGPTFRAENSNTS 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M      ++   +   ++                  T  
Sbjct: 239 RHLAEFWMIEPEMAFCDLDGNMDLAEAFLKHIFKSVLEQCPEDLEFFNQRIDNSVLATA- 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
                          +  ++          +++     +  +W           +   L 
Sbjct: 298 ----------DNIINNEFERITYTEAIALLEKSDRTFEYPVSWGLDLQSEHERYLAEELF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                I+  YP    A       D +  +          L     E++   ++  R +  
Sbjct: 348 KKPV-IVTDYPQEIKAFYMRQNEDGKTVRAM------DVLAPKVGEIIGGSQREERLDIL 400

Query: 292 MQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +  + +      +   +L          +G  +GF+R+V  +TG  NI +VI  P 
Sbjct: 401 QKRMEALQINPDEL-WWYLDLRRYGTVPHAGFGLGFERVVQFMTGMANIRDVIPFPR 456


>gi|218247934|ref|YP_002373305.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|257060743|ref|YP_003138631.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|218168412|gb|ACK67149.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|256590909|gb|ACV01796.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 463

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/357 (17%), Positives = 112/357 (31%), Gaps = 45/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF------ 62
           H R R       +  RN   +++  +F E  FI + +  +  S       +         
Sbjct: 123 HLRSRTNTLGAVMRVRNACATAIHRFFQERDFIWVHTPIITASDCEGAGELFTVTSFDLS 182

Query: 63  -------STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
                   T    QD   K  YL  S +    +++A   + ++ F   +R        H 
Sbjct: 183 KIPQTQEKTVDYSQDFFGKRAYLTVSGQLEA-EVMAMAFQNVYTFGPTFRAENSNTSRHL 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E   +     ++   +   +        +   F+E    +V E  
Sbjct: 242 AEFWMVEPEMAFCDLEGDQELAEAFLKYIFKFVLETCSE----DMEFFNERIDKSVLETA 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               N +        ++          ++A  +  +   W           +   L    
Sbjct: 298 NNIINNEF-------ERITYTEAVKLLEKADRQFEYPVEWGIDLQSEHERYLAEELFKKP 350

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEM 292
             I+  YPA   A       D +             L     E++   ++  R E  ++ 
Sbjct: 351 L-IVTNYPAGIKAFYMRLNEDDKTVAAM------DVLAPKIGEIIGGSQREERLEVLQQR 403

Query: 293 QEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +K  I  E       +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 404 IQKLGILEEDI---WWYLDLRRYGTVPHAGFGLGFERLVQFMTGMGNIRDVIPFPRT 457


>gi|148244316|ref|YP_001219010.1| lysyl-tRNA synthetase, class II [Candidatus Vesicomyosocius
           okutanii HA]
 gi|146326143|dbj|BAF61286.1| lysyl-tRNA synthetase, class II [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 294

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 89/313 (28%), Positives = 146/313 (46%), Gaps = 28/313 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R  L+K+ +I   +R++F E + +E+ +  LQ +  ++ +I + S  +     I+   YL
Sbjct: 5   RNTLIKKQLIIQKIRQFFKEQEVLEVQTPILQNTSTSDVYIDSISLTINTDIGIQSIQYL 64

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            TSPE   KKLLA G   I+     +RN E G  +  EFT+LE+YR      QLM D +N
Sbjct: 65  HTSPELEMKKLLAQGSGDIYQICQVFRNNEYGKQNFNEFTLLEYYRLGFDIHQLMADMIN 124

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++                      +   ++ A+ F +YANID+          D   L 
Sbjct: 125 LLKM----------------LGIQDKVYQLSYAQVFNQYANIDILN-------TDIASLK 161

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           + A + G+         D+   + +  +EP L       +  YP  +S LA +       
Sbjct: 162 IIASKLGLSTDF-VWIEDLQMLLFVHLVEPKLKNLPLCFIYDYPKSQSTLAKVKNQ---V 217

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MP 317
            KRFELY   +E+ N  DEL    E +  F  E  ++K+       ID  FL+ L++ +P
Sbjct: 218 AKRFELYLNGVEVANGYDELQTKDEYQQVFICENNKRKQFSKLISQIDVSFLSKLSKPLP 277

Query: 318 QSSGIAMGFDRLV 330
           Q +G+A+G +RL+
Sbjct: 278 QCTGVAIGINRLL 290


>gi|229829267|ref|ZP_04455336.1| hypothetical protein GCWU000342_01354 [Shuttleworthia satelles DSM
           14600]
 gi|229792430|gb|EEP28544.1| hypothetical protein GCWU000342_01354 [Shuttleworthia satelles DSM
           14600]
          Length = 474

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 98/357 (27%), Gaps = 39/357 (10%)

Query: 11  NRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETH-------- 58
                 R   F      R++   ++ ++F E  F+   +  L  S               
Sbjct: 132 LPHLRARTNTFEAAFRVRSVAAYAIHKFFQERDFVYTHTPILTSSDAEGAGEMFQATTLD 191

Query: 59  IRAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
           ++    +        +  Y     L  S +   +    A  +KI+ F   +R        
Sbjct: 192 LKDVPVDEKGNVDFTQDFYGKPVNLTVSGQLQGETFAQA-FKKIYTFGPTFRAENSNTTR 250

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M+    +++                    F+      + +
Sbjct: 251 HAAEFWMIEPEIAFADLEDAMELAEAMLKYVIAYV----MEHCPEEIAFFNSFVDKGLID 306

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                   D G                + ++      +   W           +   +  
Sbjct: 307 RLNHVVRSDFGRISYTD-------AVAELEKHNDEFEYKVFWGCDLQTEHERYLTEKI-F 358

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D R     +     I E+        D  +   R  + 
Sbjct: 359 KRPVFVTDYPKEIKAFYMKLNEDGRTVAAVDCLVPEIGEIIGGSQREDDYDKLLSRIRE- 417

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +   TY    D         + +G  +GF+RLVM +TG  NI +V+  P +
Sbjct: 418 ----NGMDESTYGYYLDLRK--YGSTRHAGFGLGFERLVMYLTGIANIRDVLPFPRT 468


>gi|218884222|ref|YP_002428604.1| aspartyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765838|gb|ACL11237.1| aspartyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 420

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 50/347 (14%), Positives = 110/347 (31%), Gaps = 38/347 (10%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W    +   +   + RN + ++ REYF +N FIE+ +  +  + G E     F  + 
Sbjct: 107 KYRWLLVRNPVEKAIFIIRNSLLNAAREYFSKNGFIEVQTPKIV-AAGAEGGATLFKIQY 165

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
              D      YL  SP+   + L+A    +I+     +R  +     H  E   ++  + 
Sbjct: 166 FENDA-----YLSQSPQLFKQMLMAG-FTRIYEITPYFRAEKYNTTRHLNESWGIDVEQG 219

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             +  + +   +  +                           +   +         L   
Sbjct: 220 FINSVEDVLQTLENLITYIIE-------------------YVLKNNKEELEILGATLKKP 260

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                +          +  G+ ++  +  SD   + L E +           +  +P   
Sbjct: 261 SSPFKRLKFQEAVDILRSEGLEISEAEDLSDYAEKKLGEIMTEKGYE--LYFIVGFPWAS 318

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +    +   D  +T++F+L    +E+ +         +           ++K  N     
Sbjct: 319 TGFYYMRDEDGVYTRKFDLDYRGLEIASGGQREHRYEKLLK------ALREKGLNPENF- 371

Query: 306 DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
              +L      MP   G  +G +RL+M +    N+ E I     ++ 
Sbjct: 372 -GFYLEAFKYGMPPHGGFGLGVERLLMRMLNLENVREAILFVRDRTR 417


>gi|115373136|ref|ZP_01460438.1| asparaginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115369892|gb|EAU68825.1| asparaginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 469

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 105/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          R+    ++  +F E  F  +++  +  S       +        
Sbjct: 128 AHLRSRTNTFGAISRVRHSAAQAIHRFFSEEGFFWVNTPIITASDTEGAGQLFRVSTLDA 187

Query: 60  -RAFSTELI----IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                T+       +D   K  YL  S + + +    A   K++ F   +R        H
Sbjct: 188 VNPPRTDAGKIDWSKDFFGKESYLTVSGQLNVETYCCA-LSKVYTFGPTFRAENSNTTRH 246

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A              ++   +    +       +   F E +   V E 
Sbjct: 247 LAEFWMIEPEVAFADLNDNATLAERFLKYVFKAVLAEC----GPDMKFFEERQQKGVIER 302

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++++          ++ +        ++A  +  +   W +         +     + 
Sbjct: 303 MEKFSD-------STFERIEYTEAIDILKKAKKKFDYAPEWGNDLQTEHERYLTEEH-VG 354

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KE 291
              ++  YP    +       D +             L     E++   ++  R     +
Sbjct: 355 RPVVVMNYPEKIKSFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLNVFDQ 408

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +  +  E Y    D           +G  +GF+RL++ + G  NI + I  P  
Sbjct: 409 RVAQFGLNPEHYQWYRDLRR--YGTVPHAGFGLGFERLLVYMCGLQNIRDAIPFPRV 463


>gi|110667239|ref|YP_657050.1| aspartyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121692429|sp|Q18KP5|SYD_HALWD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|109624986|emb|CAJ51399.1| aspartate--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 434

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/370 (16%), Positives = 120/370 (32%), Gaps = 66/370 (17%)

Query: 4   IPSQPWW----NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P  P      +       R               R+ +  + R+ F E    EI++  +
Sbjct: 102 LPLDPSGKVNADLSTRLDNRTLDLRKKEVKAVFQIRSEVLRAARDAFRELGCTEINTPKI 161

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             + G E       TEL    +  +  ++  SP+   + ++ +G E++F     +R  E 
Sbjct: 162 VAT-GTEGG-----TELFPITYFGEEAFMNQSPQLFKQLMIGSGLERVFEIGPIFRAEEH 215

Query: 110 -GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF------QNVNCNPF 162
               H  E T +++  A  ++ + M  C  ++  A +   +   +       ++    P 
Sbjct: 216 NTPRHLNEATSIDFESAFINHAEAMDACEYVVTAAYQGVAENCITELETLGLRDGFSVPD 275

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
                I+  EA  R   I+    LD        L     +  G  V              
Sbjct: 276 ESFPRISYQEAIER---INATGELDEQLVWGDDLPTDGERALGADVGS------------ 320

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDP 281
                          +  +P+         +  D   +  F++    +EL +        
Sbjct: 321 ------------HYFITDWPSEIKPFYIKDHDDDKTLSTGFDMMHPQMELVSGGQREHRY 368

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNI 339
                 FE++      +  E +    D+   +    MP  +G  +G +RLVM + G  NI
Sbjct: 369 EHLVSGFEQQ-----GLDPEQF----DYYTKMFRYGMPPHAGWGLGGERLVMTMLGLENI 419

Query: 340 NEVIWTPFSQ 349
            E +  P  +
Sbjct: 420 REAVLFPRDR 429


>gi|157131591|ref|XP_001655895.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108881819|gb|EAT46044.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 534

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 119/355 (33%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+      F EI +  +  +  +E    
Sbjct: 208 NQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILSNKGFTEIHTPKIISAA-SEGGAN 266

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+     +       YL  SP+   +  +AA  +K+F     +R  +     H  EF  
Sbjct: 267 VFTVSYFKESA-----YLAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 321

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                 Y     A  +  N
Sbjct: 322 LDLEMAFKYHYHEVL---------------DTIGNTFTEIFKGLRDNYAREIAAVGQQYN 366

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+ P + +        ++AG+ +  ++  S    ++L   ++     +   ILD
Sbjct: 367 VEPFKFLEPPLKLEYAQAVTMLREAGVTMDDEEDLSTPSEKLLGRLVKAKYDTD-FYILD 425

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P++P+++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 426 KFPLAVRPFYTMPDPSNPKYSNSYDMFMRGEEILSGAQRIHDP--------EYLVERAKH 477

Query: 299 YNETYPID----EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 478 ----HAIDISKIAAYIEAFRFGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 528


>gi|310824351|ref|YP_003956709.1| asparaginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309397423|gb|ADO74882.1| Asparaginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 466

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 105/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          R+    ++  +F E  F  +++  +  S       +        
Sbjct: 125 AHLRSRTNTFGAISRVRHSAAQAIHRFFSEEGFFWVNTPIITASDTEGAGQLFRVSTLDA 184

Query: 60  -RAFSTELI----IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                T+       +D   K  YL  S + + +    A   K++ F   +R        H
Sbjct: 185 VNPPRTDAGKIDWSKDFFGKESYLTVSGQLNVETYCCA-LSKVYTFGPTFRAENSNTTRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A              ++   +    +       +   F E +   V E 
Sbjct: 244 LAEFWMIEPEVAFADLNDNATLAERFLKYVFKAVLAEC----GPDMKFFEERQQKGVIER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++++          ++ +        ++A  +  +   W +         +     + 
Sbjct: 300 MEKFSD-------STFERIEYTEAIDILKKAKKKFDYAPEWGNDLQTEHERYLTEEH-VG 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KE 291
              ++  YP    +       D +             L     E++   ++  R     +
Sbjct: 352 RPVVVMNYPEKIKSFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLNVFDQ 405

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +  +  E Y    D           +G  +GF+RL++ + G  NI + I  P  
Sbjct: 406 RVAQFGLNPEHYQWYRDLRR--YGTVPHAGFGLGFERLLVYMCGLQNIRDAIPFPRV 460


>gi|270261214|ref|ZP_06189487.1| asparaginyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270044698|gb|EFA17789.1| asparaginyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 466

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 108/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  ++ EN F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFYHENGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDKGAVDFSQDFFGKEAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E + +    +++   +       + +  +   F+E       E 
Sbjct: 244 LAEFWMIEPEVAFADLEDIAELAEKMLKYVFQAV----LNERMDDMQFFAERVDKDAIER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D          +G    +  +W    S      +       
Sbjct: 300 LKRFVSSDFAQV-------DYTEAVEILIASGQTFENPVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   Q
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGAQREERLDVLDQ 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +       D  +   L        +G  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLDAMGL--NKEDYWWYRDLRRYGTVPHAGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|307706198|ref|ZP_07643015.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307618388|gb|EFN97538.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 447

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++ + +      ++   +                 +E     ++E F R +  D 
Sbjct: 235 EYSYLTHNESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYISEPFKRISY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|157129543|ref|XP_001661717.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108872172|gb|EAT36397.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 534

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 118/355 (33%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+      F EI +  +  +  +E    
Sbjct: 208 NQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDILSNKGFTEIHTPKIISAA-SEGGAN 266

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+     +       YL  SP+   +  +AA  +K+F     +R  +     H  EF  
Sbjct: 267 VFTVSYFKESA-----YLAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 321

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                 Y     A  +  N
Sbjct: 322 LDLEMAFKYHYHEVL---------------DTIGNTFTEIFKGLRDSYAREIAAVGQQYN 366

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+ P + +        ++AG+ +  ++  S    ++L   ++     +   ILD
Sbjct: 367 VEPFKFLEPPLKLEYAQAVTMLREAGVTMDDEEDLSTPSEKLLGRLVKAKYDTD-FYILD 425

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P +P+++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 426 KFPLAVRPFYTMPDPHNPKYSNSYDMFMRGEEILSGAQRIHDP--------EYLVERAKH 477

Query: 299 YNETYPID----EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 478 ----HAIDISKIAAYIEAFRFGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 528


>gi|313665716|ref|YP_004047587.1| asparagine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312950012|gb|ADR24608.1| asparagine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 454

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 106/350 (30%), Gaps = 35/350 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R +          R+    ++ ++F    F+ I S  +  +          F     
Sbjct: 119 AHLRAKTKTFNAIFKIRSAAAYAIHKFFNNKGFVYIHSPIITSNDAEGAGEA--FLVTTR 176

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLE 121
                 K  +     L  S +   +    A  +K++ F   +R        H  EF M+E
Sbjct: 177 EDADYEKDFFAKKASLTVSGQLHAEAFAQA-FKKVYTFGPTFRAENSNTVKHAAEFWMIE 235

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    +  ++   ++++          F          +E     + +      N +
Sbjct: 236 PEVAFADLKDNIQLIQDMVKYIINYI----FKHNRRELEFCNEHLENGLIDKLNSVRNSE 291

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
              T                 +  +    D  +           I   +       +  Y
Sbjct: 292 FKVTTYTEAIEILKQAVANGHKFEVS---DIEFGLDLGTEHERYICEQVNKAPT-FVTNY 347

Query: 242 PAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    A       D +     +L    I EL        +  +   R ++   +  ++  
Sbjct: 348 PKEIKAFYMKQNDDNKTVAAVDLLVPGIGELVGGSQREDNYEKLIKRCKEVNIDIDQL-- 405

Query: 301 ETYPIDEDF--LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 E +  L  L    +S+G  +GF+RLVM +TGA+NI +VI  P +
Sbjct: 406 ------EWYNNLR-LYGYYKSAGFGLGFERLVMYITGASNIRDVIPFPRT 448


>gi|158294413|ref|XP_315584.3| AGAP005576-PA [Anopheles gambiae str. PEST]
 gi|157015553|gb|EAA11760.4| AGAP005576-PA [Anopheles gambiae str. PEST]
          Length = 543

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 119/355 (33%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+      F EI +  +  +  +E    
Sbjct: 217 NQDTRLDNRVLDLRTPANQAIFRLEAGVCKLFRDVLTAKGFTEIHTPKIISAA-SEGGAN 275

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K+F     +R  +     H  EF  
Sbjct: 276 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 330

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                 Y     A  +  N
Sbjct: 331 LDLEMAFKYHYHEVL---------------DTIGNTFTEMFKGLRDHYAKEIAAVGQQYN 375

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+ P + +        ++AG+++  ++  S    ++L   ++     +   ILD
Sbjct: 376 VEPFKFLEPPLKLEFAQAVAMLREAGVQMDDEEDLSTPSEKLLGRLVKAKYDTD-FYILD 434

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           PA+ +++  ++++    E+ +    + DP        + + E+ K+
Sbjct: 435 KFPLAVRPFYTMPDPANAKYSNSYDMFMRGEEILSGAQRIHDP--------EYLIERAKL 486

Query: 299 YNETYPID----EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 487 ----HGIDLSKIAAYIDAFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 537


>gi|325264319|ref|ZP_08131050.1| asparagine--tRNA ligase [Clostridium sp. D5]
 gi|324030390|gb|EGB91674.1| asparagine--tRNA ligase [Clostridium sp. D5]
          Length = 463

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 101/355 (28%), Gaps = 41/355 (11%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI--------- 59
           H R R          R+MI  ++ ++F +  F+ + +  +  S       +         
Sbjct: 123 HLRPRTNTFQAVFRVRSMIAFAIHQFFQDRGFVYVHTPLITGSDCEGAGEMFRVTTLDMD 182

Query: 60  ----RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                   T    QD   K   L  S +    +  A     I+ F   +R        H 
Sbjct: 183 NVPKNPDGTIDYSQDFFGKETNLTVSGQL-NGETFAQAFRSIYTFGPTFRAENSNTTRHA 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    +  M     +++                  N F+      + +  
Sbjct: 242 AEFWMIEPEIAFADLDDNMDLAEAMLKYVISYV----LENAPEEMNFFNSFVDKGLMDRL 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               N D                    ++   +  +  TW           +   +    
Sbjct: 298 KNVENSDFARVTYTE-------AVELLEKNNDKFEYKVTWGTDLQTEHERYLTEEVYKRP 350

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP    A       D +     +     I E+        D  +   R ++   
Sbjct: 351 V-FVTDYPKEIKAFYMKLNEDGKTVAAVDCLVPGIGEIIGGSQREDDYDKLVQRMKEMN- 408

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +  E Y    D         + +G  +GF+R VM +TG +NI +V+  P +
Sbjct: 409 ----LGEEDYKFYLDLRR--YGSTRHAGFGLGFERCVMYLTGMSNIRDVVPFPRT 457


>gi|319946940|ref|ZP_08021174.1| asparagine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746988|gb|EFV99247.1| asparagine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 454

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 131 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 182

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 183 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 241

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +    +            +E     +AE F R    D 
Sbjct: 242 EYSYLTHDESLDLQEAYVKALLQGVLDRA-PQALETLERDTELLKRYIAEPFKRITY-DE 299

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 300 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 346

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + + + +  +
Sbjct: 347 AAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMESLGMD 401

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 402 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 448


>gi|322712478|gb|EFZ04051.1| aspartate-tRNA ligase [Metarhizium anisopliae ARSEF 23]
          Length = 913

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 118/336 (35%), Gaps = 38/336 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H   +     R+M+    RE   +  F+EI++  LQ +   E+    F       ++  
Sbjct: 275 RHPSNQALFRIRSMVTRMFRETLEQQGFVEINTPKLQPAA-TESGAAVFKV-----NYFG 328

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           +  +L  SP+ + +  ++A   +++     +R        H  E+T L+   + E  Y +
Sbjct: 329 RNAFLAQSPQLAKQSAVSADFGRVYEVGPVFRAENSNTHRHLTEYTGLDIEMSIEHDYHE 388

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      ++             +     P  E +++                  +    
Sbjct: 389 VICVIDEFLKNVFTSVYAMPEVKEVQKRWPSKEFKWL------------------EETLI 430

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
            +        +  G  V  +D  +    R+    +    G +   +LD++PA       +
Sbjct: 431 LNFEDGIQMLRDDGRDVEMEDLSTPDEIRLGE-LVREKYGTD-YYVLDKFPASARPFYTH 488

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             P +P +T+ F+++    E+C+    + D  E R        +   I  +     ED+L
Sbjct: 489 KDPENPFWTRSFDIFIRGQEICSGGQRIHDAAELRE-----NMQAVGISEDGM---EDYL 540

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           A      P  +G  +G +R+V  +    ++      
Sbjct: 541 AAFDLGAPPHAGAGLGLERIVAWMLELGDVRYASLF 576


>gi|291541007|emb|CBL14118.1| aspartyl-tRNA synthetase, archaeal type [Roseburia intestinalis
           XB6B4]
          Length = 443

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 113/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  +    R++     F EI +  +   S     ++          ++ 
Sbjct: 135 RNIRERAKFRIQEGVVRGFRDFLYGQGFTEIHTPKIGAKSAEGGANL-------FRLEYF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P  LQ SP+F  +  +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 188 HRPAVLQQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +               +K ++ +                    R   + L      P  
Sbjct: 247 DIMAMETGFLQYMIALLKKDYAEE-------------------LRLLGVTLPNVDKIPTV 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                    A++   ++ +          ++ +  +     +    +  YP+ +     +
Sbjct: 288 RFDEAKEKVAEKYHRQIRNPYDLEPEEEALIGQYFKEEYDAD-FVFVTHYPSKKRPFYAM 346

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               DP +T  F+L    +E+      + D  +   + E     K+ + +E     E +L
Sbjct: 347 DDPADPTYTLSFDLLYQGLEITTGGQRIHDYNKLMEKIE-----KRGMESEGM---EQYL 398

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     MP   G+ +G +RL M + G +N+ E    P  
Sbjct: 399 SVFKHGMPPHGGLGIGLERLTMKLVGEDNVRETTLFPRD 437


>gi|224087415|ref|XP_002308157.1| predicted protein [Populus trichocarpa]
 gi|222854133|gb|EEE91680.1| predicted protein [Populus trichocarpa]
          Length = 530

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 53/337 (15%), Positives = 101/337 (29%), Gaps = 45/337 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPLYL 78
               +  + +  R++ +   F+EI +  L    S G           +   D+  +   L
Sbjct: 224 IFRIQCQVCNIFRQFLLSEDFVEIHTPKLIAGSSEGGSA--------VFKLDYKGQAACL 275

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   +  +     ++F     +R  +     H  EFT L+     + +   + D +
Sbjct: 276 AQSPQLHKQMAICGDFGRVFEIGPVFRAEDSYTHRHLCEFTGLDVEMEIKQHYTEVMDIV 335

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +         K  S            E +       R                     
Sbjct: 336 DHLFVTMFDHLNKKCSKYLEAVGRQYPFEPLKYLPKTLR---------------LRFEEG 380

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
               ++AG+ +      +    R L + +    G     IL RYP             DP
Sbjct: 381 VQMLKEAGVEIDPYGDLNTESERKLGQLVLEKYGTE-FYILHRYPLAVRPFYTMPCYDDP 439

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFLAC 312
           +++  F+++    E+ +    +  P     R +               ID      ++  
Sbjct: 440 KYSNSFDVFIRGEEIISGAQRVHVPEFLVERAQ------------ACGIDVSTISTYIDS 487

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                P   G   G +R+VML  G NNI +    P  
Sbjct: 488 FRYGAPPHGGFGAGLERVVMLFCGLNNIRKTSLFPRD 524


>gi|331087243|ref|ZP_08336313.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330408929|gb|EGG88390.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 463

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 104/356 (29%), Gaps = 43/356 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST---E 65
           H R R          R++I  ++ ++F E  F+ + +  +  S       +   +T   E
Sbjct: 123 HLRPRTNTFQAVFRVRSLIAYAIHQFFQERGFVYVHTPLITGSDCEGAGEMFRVTTLDME 182

Query: 66  LIIQDH----------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
            + ++             K   L  S + + +    A    ++ F   +R        H 
Sbjct: 183 NVPKNADGSVDYTKDFFNKETSLTVSGQLNAETYAQA-FRNVYTFGPTFRAENSNTTRHA 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    +  M     +++                  N F+      + +  
Sbjct: 242 AEFWMVEPEIAFADLDDNMILAEAMLKHIINYV----LENAPEEMNFFNSFVDKGLLDRL 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               + +                    ++   +     +W           +        
Sbjct: 298 HNVVSSEFARVTYTE-------AIEILEKNNDKFDFKVSWGVDLQTEHERYLTEE-VFKR 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP    A       D +     +     I EL        D  +   R ++   
Sbjct: 350 PVFVTDYPKDIKAFYMKMNDDNKTVAAVDCLVPGIGELIGGSQREDDYDKLLKRMQEMN- 408

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +  E Y     +L        + +G  +GF+R VM +TG +NI +VI  P +
Sbjct: 409 ----LDPEEYQ---FYLDLRKYGSTRHAGFGLGFERCVMYLTGMSNIRDVIPFPRT 457


>gi|296876373|ref|ZP_06900425.1| asparagine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432663|gb|EFH18458.1| asparagine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 448

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +    +            +E     +AE F R    D 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALLQGVLDRA-PQALETLERDTELLKRYIAEPFKRITY-DE 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 294 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVINYP 340

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + + + +  +
Sbjct: 341 ADIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMESLGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 396 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 442


>gi|322391555|ref|ZP_08065024.1| asparagine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321145638|gb|EFX41030.1| asparagine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 448

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +    +            +E     +AE F R    D 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALLQGVLDRA-PQALETLERDTELLKRYIAEPFKRITY-DE 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 294 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 340

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + + + +  +
Sbjct: 341 AAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMESLGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 396 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 442


>gi|312866744|ref|ZP_07726958.1| asparagine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097825|gb|EFQ56055.1| asparagine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 448

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 120/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + IT  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQEYENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YP+   +      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVINYPSDIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + +  +     E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 388 KMESLGMDRTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 442


>gi|198418317|ref|XP_002125902.1| PREDICTED: similar to aspartyl-tRNA synthetase [Ciona intestinalis]
          Length = 533

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 52/338 (15%), Positives = 112/338 (33%), Gaps = 41/338 (12%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           ++        +    R+      F EI +  +  +  +E     F+      +      +
Sbjct: 224 KQAIFRLEAGVCKLFRDTLTAKGFCEIHTPKIISAA-SEGGANVFTVSYFKTNA-----F 277

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  +AA  EK+F     +R  +     H  EF  L+   A + +   +   
Sbjct: 278 LAQSPQLYKQMAIAADFEKVFTVGAVFRAEDSNTHRHLTEFVGLDLEMAFQYHYHEVLQV 337

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           +  +  +     ++ +  +          E     E        +    L++        
Sbjct: 338 IGDMFISIFKGLRESYQKEITTVARQYPAEPFKFLEPTLILQYPEAVKMLND-------- 389

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                  AG+ +  ++  S    ++L   +      +   ILD+YP           P +
Sbjct: 390 -------AGVEMQDNEDLSTPSEKLLGRLVRQKYDTD-YYILDKYPLEVRPFYTMPDPDN 441

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFLA 311
           P+++  ++++    E+ +    + DP     R +             + ID    E ++ 
Sbjct: 442 PKWSNSYDMFMRGEEILSGAQRIHDPEFLSERAK------------AHGIDLKTIEAYID 489

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 P  +G  +G +R+VML  G +NI      P  
Sbjct: 490 SFKYGCPPHAGGGIGMERVVMLYLGLHNIRSSSLFPRD 527


>gi|148233149|ref|NP_001080336.1| aspartyl-tRNA synthetase [Xenopus laevis]
 gi|27503265|gb|AAH42227.1| Dars-prov protein [Xenopus laevis]
          Length = 530

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 113/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    R+      F+EI +  +  +  +E    
Sbjct: 204 NQDTRLDNRVIDLRTSTSQAVFGLQSGICQLFRDTLTNKGFVEIQTPKIISAA-SEGGAN 262

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 263 VFTVSYFKTSA-----YLAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVG 317

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + D +           Q+ F  +          E     E   R   
Sbjct: 318 LDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQTVCKQFPCEPFKFLEPTLR--- 374

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++     +   ILD
Sbjct: 375 ------------LEYTEGVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILD 421

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+++  ++++    E+ +    + DP     R          I
Sbjct: 422 KYPLAVRPFYTMPDPNNPKYSNSYDMFMRGEEILSGAQRVHDPQLLTDR-----ATHHGI 476

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 477 DLEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRD 524


>gi|288870132|ref|ZP_06113061.2| asparagine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288868250|gb|EFD00549.1| asparagine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 497

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 51/359 (14%), Positives = 106/359 (29%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++I  ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 157 HLRPRTNTFQAVFRVRSLIAYAIHQFFQERDFVYVHTPLITGSDCEGAGEM--FQVTTLD 214

Query: 69  QDH----------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +             +  +     L  S + + +    A    ++ F   +R        
Sbjct: 215 LNDIPKTDEGKVDFSQDFFCKPTNLTVSGQLNAETYAMA-FRNVYTFGPTFRAENSNTTR 273

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M+   ++++         +        N F++     + +
Sbjct: 274 HAAEFWMIEPEMAFADLNDDMELAESMLKY----VIGYVLDHAPEEMNFFNQFVDKGLLD 329

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N +                    ++      +   W           +   L  
Sbjct: 330 RLHHVLNSEFAHVTYTE-------AVELLEKHNDEFDYKVFWGCDLQTEHERYLTEQLFK 382

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        D  +   R ++ 
Sbjct: 383 KPV-FVTDYPKEIKAFYMKMNPDNKTVAAVDCLVPGIGEIIGGSQREDDYDKLTARMDEL 441

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +K+         D  F   L      + +G  +GF+R VM +TG +NI +V+  P +
Sbjct: 442 GLKKE---------DYQFYLDLRKYGSTRHAGFGLGFERCVMYLTGMSNIRDVVPFPRT 491


>gi|284050824|ref|ZP_06381034.1| asparaginyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 463

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 103/357 (28%), Gaps = 45/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN   +++ ++F E  F+ I +  +  S       +  FS   +
Sbjct: 122 AHLRSRTNTYGAVFRVRNACAAAVHQFFQERGFLWIHTPIITASDCEGAGEL--FSVTSL 179

Query: 68  IQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +                  K  +L  S +    +++A     ++ F   +R       
Sbjct: 180 DLNNLPLTDTKAIDFSQDFFGKRAFLTVSGQLEA-EIMALAFGNVYTFGPTFRAENSNTS 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M      ++   +   ++                  T  
Sbjct: 239 RHLAEFWMIEPEMAFCDLDGNMDLAEAFLKHIFKSVLEQCPEDLEFFNQRIDNSVLATA- 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
                          +  ++          +++     +  +W           +   L 
Sbjct: 298 ----------DNIINNEFERITYTEAIALLEKSDRTFEYPVSWGLDLQSEHERYLAEELF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                I+  YP    A       D +  +          L     E++   ++  R +  
Sbjct: 348 KKPV-IVTDYPQEIKAFYMRQNEDGKTVRAM------DVLAPKVGEIIGGSQREERLDIL 400

Query: 292 MQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +  + +      +   +L          +G  +GF+R+V  +TG  NI +VI  P 
Sbjct: 401 QKRMEALQINPDEL-WWYLDLRRYGTVPHAGFGLGFERVVQFMTGMANIRDVIPFPR 456


>gi|118580126|ref|YP_901376.1| asparaginyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166231670|sp|A1APP8|SYN_PELPD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|118502836|gb|ABK99318.1| asparaginyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 459

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 59/355 (16%), Positives = 108/355 (30%), Gaps = 40/355 (11%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
            H R R          R+ +  ++  +F +N F+ + +  +  S       +   +T   
Sbjct: 119 AHLRPRSNTFGAVFRLRSRLAQAIHRFFGDNNFLYVHTPIITASDCEGAGELFRVTTLDA 178

Query: 65  ---------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                        QD   +   L  S +   +    A    I+ F   +R        H 
Sbjct: 179 ASPPLLEGRPDFGQDFFGQKTGLTVSGQLEGELFALA-FSDIYTFGPTFRAENSNTPRHA 237

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A              +R     A ++           F       + E  
Sbjct: 238 AEFWMIEPEMAFADLADDAALAEKFVRYLCRFALEECAE----EMAFFDRQIEKGLLERV 293

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R A  D         + +      + Q++G+  ++   W           I   +    
Sbjct: 294 RRVAEADFV-------RMEYDEAIQRLQRSGVTFSYPVEWGLDLQTEHERYITEKIVGGP 346

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             IL  YP    A       D R     +L    +       E++   ++  R +     
Sbjct: 347 AFIL-NYPRDIKAFYMRSNPDNRTVAAMDLLVPKV------GEIIGGSQREERLDVLEAR 399

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ++     P+   +L          +G  +GF+RLVM ++G  NI +VI  P +
Sbjct: 400 MAELGIAREPL-WWYLESRRWGSCPHAGFGLGFERLVMYLSGMENIRDVIPFPRT 453


>gi|332073880|gb|EGI84358.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 447

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 117/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   L  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++  +++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLIHDESLDLQEAYVKTLLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|67922046|ref|ZP_00515562.1| Asparaginyl-tRNA synthetase, class IIb [Crocosphaera watsonii WH
           8501]
 gi|67856262|gb|EAM51505.1| Asparaginyl-tRNA synthetase, class IIb [Crocosphaera watsonii WH
           8501]
          Length = 463

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 112/358 (31%), Gaps = 47/358 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI- 67
           H R R       +  RN   +++  +F E  F+ + +  +  S       +  F+     
Sbjct: 123 HLRSRTNTIGAVMRVRNACATAIHNFFQERDFMWVHTPIITASDCEGAGEL--FTVTNFD 180

Query: 68  --------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          QD   K  YL  S +    +++A   + ++ F   +R        
Sbjct: 181 LSKIPVDKQEKIDYSQDFFGKQAYLTVSGQLEA-EVMAMSFQNVYTFGPTFRAENSNTSR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E         ++   +   +        +   F++    +V E
Sbjct: 240 HLAEFWMVEPEMAFCDIEGDQDLAEEFLKYIFKYVLETCPE----DMEFFNKRIDKSVLE 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N +        ++          ++   +  +   W           +   L  
Sbjct: 296 TADNIINNEF-------ERITYTKAIELLEKCNKKFEYAVEWGIDLQSEHERYLAEELFK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               I+  YPA   A       + +             L     E++   ++  R   ++
Sbjct: 349 KPL-IVTNYPAAIKAFYMRLNDNEKTVAAM------DVLAPKIGEIIGGSQREERL--DV 399

Query: 293 QEKKKIYNETYPID-EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E++    E  P D   +L          +G  +GF+R+V  +TG  NI +VI  P +
Sbjct: 400 LERRINEMEIIPDDLWWYLDLRKYGTVPHAGFGLGFERVVQFMTGMGNIRDVIPFPRT 457


>gi|261749579|ref|YP_003257265.1| asparaginyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497672|gb|ACX84122.1| asparaginyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 474

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 112/359 (31%), Gaps = 31/359 (8%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
            +  H R R       +  R+ +  S+ +YF E+ F  I++  +  S       +   +T
Sbjct: 120 RKQAHLRFRTNIFSSIMRVRHHVAFSIHKYFHEHGFFYINTPIITTSNAEGAGKMFQVTT 179

Query: 65  -------ELIIQDHIRKPL-----YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                   +       K       YL  S +   +    A   K++ F  A+R       
Sbjct: 180 MDLKNIPHIRENVDYTKDFFQCKTYLSVSGQLEAETASLA-LGKVYTFGPAFRAENSNTS 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E+ M    + ++   +   +      +   +   +      +
Sbjct: 239 RHLSEFWMIEPEMAFCHLEENMDRAEDFLKFVIQYIIENCIEDLSFLKDHIEKWNQKQKS 298

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               R   +              ++L    Q+  ++  H   W         + +     
Sbjct: 299 TLLERLELLLKFPFQRISYTEVINILEKSIQKKMVKFVHPVIWGMDLQSEHEQYLVKKCF 358

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEK 290
                +   YP+   A       D +  +  + L+    E+               R + 
Sbjct: 359 QYPVIVF-DYPSCIKAFYMRINNDGKTVRAMDILFPEIGEIIGGSQREERYDILLKRIKD 417

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  + +K+          +L          SG  +GFDRLV  +TG  NI +VI  P +
Sbjct: 418 KNIDDRKL--------WWYLDTRRFGSVPHSGFGLGFDRLVQFITGMKNIRDVIPFPRT 468


>gi|206901450|ref|YP_002250648.1| asparaginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740553|gb|ACI19611.1| asparaginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 433

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 109/348 (31%), Gaps = 46/348 (13%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W R    ++   L  R+ +  ++R++  E  F+ ID+  L  S    T      T L
Sbjct: 120 RHLWIRSR--KQNAILRIRSEVVKAIRDFLDEKGFVLIDAPILTPSACEGT------TTL 171

Query: 67  IIQDHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
              D+      YL  S +   +    A   K++CF  A+R  +     H  EF M+E   
Sbjct: 172 FELDYFDLGKAYLSQSGQLYMEAACMA-FGKVYCFGPAFRAEKSKTRRHLTEFWMVEPEM 230

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A   ++  M+    ++    +   +K      +        E +        Y       
Sbjct: 231 AFWDWQDNMRLQEELVSYIVQRVLEKRKRELEILERDTKPLEKVVPPFPRITY------- 283

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                            ++ G  V + D +      I+  +       +    +  YPA 
Sbjct: 284 ----------REAIEILKRNGQNVEYGDDFGGDEETIISSQ------FDRPVFIHHYPAK 327

Query: 245 E-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
                    P +P      +L A     E+      + D      + E+    K+     
Sbjct: 328 IKPFYMQPDPENPEEVLNNDLLAPEGYGEIIGGSQRIHDLKLLEKKLEEYNLPKEAF--- 384

Query: 302 TYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          SG  +G +R V  + G  ++ E I  P  
Sbjct: 385 -----EWYLDLRRYGSVPHSGFGLGIERTVAWICGLKHVREAIPFPRM 427


>gi|253745047|gb|EET01155.1| Aspartyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 555

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 123/336 (36%), Gaps = 34/336 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN-ETHIRAFSTELIIQDHIRKPLY 77
           +  +  R+ I    R +     FIEI++  +    G  E     F+      ++      
Sbjct: 244 QAIMRVRSAIAHEFRSFLDNAGFIEINTPKI--IAGTSEGGAAVFNV-----NYFNTKAC 296

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYR-AHESYEQLMKD 135
           L  SP+   +  +++G  +++     +R        H  EFT L+     +ESY +++  
Sbjct: 297 LAQSPQLYKQMCISSGFGRVYEIGPVFRAENSHTHRHLCEFTGLDLEMEIYESYSEVLTL 356

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
             ++++   +    K               + I+V  A       +     D     +  
Sbjct: 357 LGDLMKHIFKTVEAKCA-------------KEISVIRAQYDLTVPEPLVWADETVIVNFC 403

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
                 Q+AG   +  D  +    R L + I+     +   ILD++P           P 
Sbjct: 404 DGIKMLQEAGYDASPLDDLNTENERALGKLIKEKYNTD-FYILDKFPLSARPFYTMPDPQ 462

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           D R++  ++++    E+C+    + +P       EK+ +E+     E+    + ++    
Sbjct: 463 DGRYSNSYDMFVRGEEICSGAQRVHNP----ELLEKQCRERNV-DPESL---KSYIDAFK 514

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                  G  +G +R+VML+ G  N  +    P +Q
Sbjct: 515 YGCAPHGGAGLGLERIVMLMLGIENCRQTCLFPRTQ 550


>gi|301321281|gb|ADK69924.1| asparagine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 454

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 111/351 (31%), Gaps = 37/351 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R +          R+    ++  +F E  F+ I S  +  +          F     
Sbjct: 119 AHLRAKTKTFNAIFKIRSAAAYAIHRFFNEKNFVYIHSPIITSNDAEGAGEA--FLVTTR 176

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLE 121
                 K  +     L  S +   +    A  +K++ F   +R        H  EF M+E
Sbjct: 177 EDADYEKDFFGKKASLTVSGQLHAEAFAQA-FKKVYTFGPTFRAENSNTAKHAAEFWMIE 235

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    +  ++   ++++          F          +E     + +      N +
Sbjct: 236 PEVAFADLKDNIQLIQDMVKYIINYI----FKHNRRELEFCNEQLENGLIDKLNNVRNSE 291

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
              T       +   +  QA + G +    D  +           I   +       +  
Sbjct: 292 FKVTTY----TEAIEILKQAVKDGHKFEVSDIEFGLDLGTEHERYICEQVNKAPT-FVTN 346

Query: 241 YPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YP    A       D +     +L    I EL        +  +   R ++   +  ++ 
Sbjct: 347 YPKEIKAFYMKQNDDNKTVAAVDLLVPGIGELVGGSQREDNYEKLIKRCKEVNIDIDQL- 405

Query: 300 NETYPIDEDF--LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  E +  L  L    +S+G  +GF+RLVM +TGA+NI +VI  P +
Sbjct: 406 -------EWYNNLR-LYGYYKSAGFGLGFERLVMYITGASNIRDVIPFPRT 448


>gi|148287356|emb|CAJ32470.1| Lysyl-tRNA synthetase [Morganella morganii]
          Length = 119

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 1/117 (0%)

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            +  YPA  S LA     +P  T RFE +    E+ N   EL D  +Q  RF +++++K 
Sbjct: 3   FIIEYPAEVSPLARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAERFAEQVRQKD 62

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              +E    DED++  L   +P ++G+ +G DR+VML T ++ I +VI  P  +  +
Sbjct: 63  AGDDEAMFYDEDYVVALEHGLPPTAGLGIGIDRMVMLFTDSHTIRDVILFPAMRPGK 119


>gi|125810817|ref|XP_001361642.1| GA17710 [Drosophila pseudoobscura pseudoobscura]
 gi|54636818|gb|EAL26221.1| GA17710 [Drosophila pseudoobscura pseudoobscura]
          Length = 530

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 114/355 (32%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   E  F EI +  +  +  +E    
Sbjct: 204 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAA-SEGGAN 262

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K++     +R  +     H  EF  
Sbjct: 263 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVG 317

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                 Y    E+  +   
Sbjct: 318 LDLEMAFKYHYHEVLHT---------------IGNTFTAIFKGLRDNYSREIESVGQQYK 362

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +D    L+ P            ++AG+    ++  S    ++L   ++     +   ILD
Sbjct: 363 VDAFKFLEPPLILQFSEGVAMLREAGVETGDEEDLSTPNEKLLGRLVKAKYDTD-FYILD 421

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P++  ++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 422 KFPLAIRPFYTMPDPSNSTYSNSYDMFMRGEEILSGAQRIHDP--------EYLIERAKH 473

Query: 299 YNETYPID----EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 474 ----HGIDTTKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 524


>gi|327474921|gb|EGF20326.1| asparagine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 448

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 122/356 (34%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMKIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + I+  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRISYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YP+   +      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTYVVNYPSAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  ++  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMNELGMDTTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|294781999|ref|ZP_06747331.1| asparagine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481810|gb|EFG29579.1| asparagine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 461

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 108/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  +L ++F EN F+ + +  +  S       +  F    +
Sbjct: 120 AHLRARTNTFSAVFRVRSVLAYALHKFFQENNFVYVHAPIITGSDAEGAGEM--FRITTL 177

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +             K  +     L  S + +  +   A    ++ F   +R       
Sbjct: 178 DLNKVPKKENGEVDFSKDFFGKSTNLTVSGQLNL-ETFCAAFRNVYTFGPTFRAEYSNTA 236

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      LM+    +++   +                F+      + 
Sbjct: 237 RHASEFWMVEPEIAFGDIFALMELAEAMVKYIIKYV----MDNCPEEMEFFNSFIEKGLF 292

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D G                  +++G +      W           +     
Sbjct: 293 DKLNNVLNNDFGRVTYTE-------AIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYF 345

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +  +  +L A  I       +  D  E   +    
Sbjct: 346 KKPV-FVTDYPKDIKAFYMKLNEDNKTVRAMDLLAPGIGEIIGGSQREDSYELLSK---- 400

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K+   NE     E +L          SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 401 -RMKELGLNEEDY--EFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRT 455


>gi|161344750|ref|NP_442773.2| asparaginyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|20141643|sp|P52276|SYN_SYNY3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
          Length = 462

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 112/356 (31%), Gaps = 44/356 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI- 67
           H R R       +  RN   +++ ++F E  F+ + +  +  S       +   +T  + 
Sbjct: 123 HLRPRTNTIGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGDLFKVTTLDLQ 182

Query: 68  -----------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQP 115
                       QD   K  YL  S +    +++A   + ++ F   +R        H  
Sbjct: 183 RVPKNGEGIDYSQDFFGKQAYLTVSGQLEA-EVMALAFQNVYTFGPTFRAENSNTSRHLA 241

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A    E   +     ++   +   +K              PE +   +   
Sbjct: 242 EFWMVEPEMAFCDLEGDRQWAEEFLKYIFKFVLEKC-------------PEDMEFFDQRI 288

Query: 176 RYANIDLGTTLDNPDQP--DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               +     + N +             ++A  +  +   W           +       
Sbjct: 289 DNTVLATADNIINNEFAWLTYSEAIKLLEKADQKFEYPVAWGVDLQSEHERYLAET-VFK 347

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             TI+  YP    A       D +     ++      L     E++   ++  R +   Q
Sbjct: 348 RPTIVTDYPKDIKAFYMRLNDDGKTVAAMDI------LAPKIGEIIGGSQREERLDILTQ 401

Query: 294 EKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ++       +   +L          +G  +GF+R+V  +TG  NI +VI  P +
Sbjct: 402 RMQEQGVPEEDL-WWYLDLRRYGSVPHAGFGLGFERIVQFMTGMANIRDVIPFPRT 456


>gi|153854771|ref|ZP_01996005.1| hypothetical protein DORLON_02003 [Dorea longicatena DSM 13814]
 gi|149752678|gb|EDM62609.1| hypothetical protein DORLON_02003 [Dorea longicatena DSM 13814]
          Length = 463

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 101/359 (28%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +  F    +
Sbjct: 122 AHLRPRTNTFQAVFRVRSLTAYAIHKFFQERGFVYVHTPLITGSDCEGAGEM--FQVTTM 179

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +             K  +     L  S + + +    A    I+ F   +R       
Sbjct: 180 DLNNVPKNEDGSVDYSKDFFGKETSLTVSGQLNGETYAQA-FRNIYTFGPTFRAENSNTT 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M     +++                  N F+      + 
Sbjct: 239 RHAAEFWMIEPEMAFADLDDDMFVAEAMLKYVINYV----LENAPEEMNFFNSFVDKGLL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      + D                    ++   +  +  TW           +     
Sbjct: 295 ERLHNVVSSDFARVTYTE-------AVELLEKHNDKFEYKVTWGTDLQTEHERYLTEE-V 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +     I       +  D  ++      E
Sbjct: 347 FKRPVFVTDYPKEIKAFYMKLNDDGKTVAAVDCLVPGIGEIIGGSQREDDYDKLKARMDE 406

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  K++        D  F   L      + +G  +GF+R VM +TG  NI +VI  P +
Sbjct: 407 LGLKEE--------DYKFYMDLRKYGSTRHAGFGLGFERCVMYLTGMGNIRDVIPFPRT 457


>gi|315613513|ref|ZP_07888420.1| asparagine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315314204|gb|EFU62249.1| asparagine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 447

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIVYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +    +               +   +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTDLLKRY-IAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + + +++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMEELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|307704413|ref|ZP_07641325.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622026|gb|EFO01051.1| asparaginyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 447

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +H ++++ +      ++   +    +            +E     +AE F R    D 
Sbjct: 235 EYSHLTHDESLDLQEAYVKALLQGVLDRA-PQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|306824865|ref|ZP_07458209.1| asparagine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304433076|gb|EFM36048.1| asparagine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 447

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +    +            +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLDRA-PQALETLERDTELLKRYIAEPFKRITY-DE 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|332361017|gb|EGJ38821.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 448

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                  E     +AE F R    D 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLD-RAPQTLETLERDVELLKRYIAEPFKRVTY-DE 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AIDLLQAHENDEDADYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + + +++  +
Sbjct: 341 AAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMEELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 TSEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|299143963|ref|ZP_07037043.1| asparagine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518448|gb|EFI42187.1| asparagine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 484

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 111/358 (31%), Gaps = 45/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R+++  ++ ++F E  F+ +++  +  S       +   +T   
Sbjct: 143 AHLRGRSNTFNAVFRVRSILAFAIHKFFQEKGFVYVNTPLITASDAEGAGEMFQVTTLDL 202

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   K   L  S +   +    A    ++ F   +R        H
Sbjct: 203 KNIPLTEDGKVDFSNDFFGKSTNLTVSGQLEAESFALA-FGNVYTFGPTFRAENSNTARH 261

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E+ M+    +++   +                F+      + E 
Sbjct: 262 AAEFWMIEPELAFADLEENMRISEEMLKYIIKYV----LDNAKDEMEFFNSFIDKGLFER 317

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  +++G    +   W           +   +   
Sbjct: 318 LNNVVNSDFGRITYTE-------AIEVLKKSGREFKYPVEWGVDLQTEHERYLTEEVYKK 370

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    +       E++   ++  R E   +
Sbjct: 371 PL-FVINYPKEIKAFYMKENEDKKTVAAMDLLVPGV------GEIIGGSQREDRLEVLEE 423

Query: 294 EKKKIYNETYPID--EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K I      +D  + +L        Q SG  +GF+R VM VTG +NI +VI  P +
Sbjct: 424 KMKNIG---MDMDTYKWYLDLRRYGSAQHSGFGLGFERAVMYVTGMSNIRDVIPFPRT 478


>gi|15903440|ref|NP_358990.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116515635|ref|YP_816831.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|38258368|sp|Q8CWQ4|SYN_STRR6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122278323|sp|Q04JK7|SYN_STRP2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|15459048|gb|AAL00201.1| Asparaginyl-tRNA synthetase (asparagine--tRNA ligase)
           [Streptococcus pneumoniae R6]
 gi|116076211|gb|ABJ53931.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 447

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 117/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   L  RN I     E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVLQIRNAIIYVTYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|163847001|ref|YP_001635045.1| asparaginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222524823|ref|YP_002569294.1| asparaginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|189083269|sp|A9WA97|SYN_CHLAA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|254782877|sp|B9LCU8|SYN_CHLSY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|163668290|gb|ABY34656.1| asparaginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222448702|gb|ACM52968.1| asparaginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 440

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 110/349 (31%), Gaps = 38/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   L  R  + ++ +E+  E  F+  D+  L  +    T      
Sbjct: 118 MAHRHLWVRSA--KQHAILRIRAEVIAAAQEWLNEQGFVRFDTPILTATAAEGT------ 169

Query: 64  TELIIQDHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           T L   D+      YL  + +   +  + A   K++CF   +R  +     H  EF M+E
Sbjct: 170 TNLFATDYFDLGKAYLAQTGQLYVEAGMMA-FGKVYCFGPTFRAEKSKTRRHLTEFWMIE 228

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  M+     +                       E     +         ++
Sbjct: 229 PEVAFADHEDNMRLQEEFVSAIVARVL---------------ERRRDDLQTLERDTTLLE 273

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                      D  +  + A Q  +  A    W + F       I      +    ++R+
Sbjct: 274 QVRPPFPRITYDEAIELIAAHQGEVEGADPLPWGEDFGAPHETLIASK--FDRPVFVERF 331

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P+   +      P  P      +L A     E+      + DPI    R  +     +  
Sbjct: 332 PSAVKAFYMQPDPERPEVALCADLLAPEGYGEIIGGSQRIHDPILLEQRIREHGLRIE-- 389

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +  + +D             SG  MG +R+V  +TG  +I E I  P 
Sbjct: 390 -DYEWYLDLR----RYGTVPHSGFGMGIERVVAWITGTRHIRETIPFPR 433


>gi|237743097|ref|ZP_04573578.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433393|gb|EEO43605.1| asparaginyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 461

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  +L ++F EN F+ + +  +  S       +  F    +
Sbjct: 120 AHLRPRTNTFSAVFRVRSVLAYALHKFFQENNFVYVHTPIITGSDAEGAGEM--FRVTTL 177

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             + + K            +     L  S +    +   A    ++ F   +R       
Sbjct: 178 DMNKLPKKENGEVDFTKDFFGKSTNLTVSGQL-NVETFCAAFRNVYTFGPTFRAEYSNTA 236

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+    +++   +                F+      + 
Sbjct: 237 RHASEFWMVEPEIAFADLSANMELAEAMVKFVIKYVMDTCPE----EMEFFNSFIEKGLF 292

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N + G                  +++  +      W           +     
Sbjct: 293 DKLNNVLNNEFGRITYTE-------AIEILEKSRKKFEFPVKWGIDLQSEHERYLAEEYF 345

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +  +  +L A  I       +  D  E   +    
Sbjct: 346 KKPV-FVTDYPKEIKAFYMKLNEDGKTVRAMDLLAPGIGEIIGGSQREDSYEILLK---- 400

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K+   NE     E +L          SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 401 -RMKELGLNEEDY--EFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRT 455


>gi|119475157|ref|ZP_01615510.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119451360|gb|EAW32593.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 465

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 105/358 (29%), Gaps = 46/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          RN++ +S+  YF +  F  +++  +  S       +  F     
Sbjct: 125 AHLRPRTNTFGAVTRVRNVLANSIHNYFFDRDFQWVNTPIITASDCEGAGEL--FRVSSL 182

Query: 67  --------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D      +L  S + + +    A   K++ F   +R       
Sbjct: 183 DLTNLPRGVDGGVDFTKDFFSDESFLTVSGQLNVEAFCMAMS-KVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A            + ++        K       +   F++    T  
Sbjct: 242 RHLAEFWMVEPEIAFADLNDDATLAEDFLKYLFNAVLNKC----GDDIEFFTQFVDKTCH 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E   + +         N ++ D        + A  +      W           +     
Sbjct: 298 ERLEKVS-------QQNFERIDYSEAIRILENAPRKFQFPVKWGLDLQSEHERFLCEEH- 349

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
           I   TI+  YP    A       D +     ++ A  I E+               R  +
Sbjct: 350 IGAPTIVMNYPKEIKAFYMRMNDDNKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAE 409

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +        +  +  D             +G  +GF+RL+  VTG +NI +VI  P +
Sbjct: 410 QNI----GGDLWWYRDLR----RYGTVPHAGFGLGFERLISYVTGLDNIRDVIPYPRT 459


>gi|293365829|ref|ZP_06612534.1| asparagine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307703302|ref|ZP_07640247.1| asparaginyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291315653|gb|EFE56101.1| asparagine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623168|gb|EFO02160.1| asparaginyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 447

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 120/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYTTYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +    +            +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLDRA-PQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + + +++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMEELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|331703087|ref|YP_004399774.1| asparagine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|256384162|gb|ACU78732.1| asparagine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256384994|gb|ACU79563.1| asparagine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455315|gb|ADH21550.1| asparagine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
 gi|328801642|emb|CBW53795.1| Asparagine tRNA ligase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 454

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 107/350 (30%), Gaps = 35/350 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R +          R+    ++  +F E  F+ I S  +  +          F     
Sbjct: 119 AHLRAKTKTFNAIFKIRSAAAYAIHRFFNERNFVYIHSPIITSNDAEGAGEA--FLVTTR 176

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLE 121
                 K  +     L  S +   +    A  +K++ F   +R        H  EF M+E
Sbjct: 177 EDADYEKDFFGKKASLTVSGQLHAEAFAQA-FKKVYTFGPTFRAENSNTAKHAAEFWMIE 235

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    +  ++   ++++          F          +E     + +      N +
Sbjct: 236 PEVAFADLKDNIQLIQDMVKYIINYI----FKHNRRELEFCNEHLENGLIDKLNNVRNSE 291

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
              T          +L    +        D  +           I   +       +  Y
Sbjct: 292 FKITTYTQ---AIEILKQAVKDGHKFEVSDIEFGLDLGTEHERYICEQVNKAPT-FVTNY 347

Query: 242 PAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    A       D +     +L    I EL        +  +   R ++   +  ++  
Sbjct: 348 PKEIKAFYMKQNDDNKTVAAVDLLVPGIGELVGGSQREDNYEKLIKRCKEVNIDIDQL-- 405

Query: 301 ETYPIDEDF--LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 E +  L  L    +S+G  +GF+RLVM +TGA+NI +VI  P +
Sbjct: 406 ------EWYNNLR-LYGYYKSAGFGLGFERLVMYITGASNIRDVIPFPRT 448


>gi|167767583|ref|ZP_02439636.1| hypothetical protein CLOSS21_02102 [Clostridium sp. SS2/1]
 gi|167710875|gb|EDS21454.1| hypothetical protein CLOSS21_02102 [Clostridium sp. SS2/1]
 gi|291558461|emb|CBL37261.1| asparaginyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 461

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 103/357 (28%), Gaps = 47/357 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELII 68
           H R R          R+ I  ++ ++F E  F+ + +  +          +  F    + 
Sbjct: 123 HLRPRTNTFQAVFRVRSQIAYAIHKFFQERDFVYVHTPLITGQDCEGAGEM--FQVTTMD 180

Query: 69  QD--------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
            +           +  +     L  S + + +    A    I+ F   +R  +     H 
Sbjct: 181 LNKIAEEGKVDYEQDFFKKPVSLTVSGQLAGETFAQA-FRNIYTFGPTFRAEDSNTTRHA 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E  M     +I+                    F++     + E  
Sbjct: 240 AEFWMIEPEIAFADLEDNMILAEQMIKYIINYV----MEHAQEELQFFNKFVDKGLLERL 295

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               + D G                  ++      +  +W           +   +    
Sbjct: 296 NHVVSSDFGRVTYTE-------AVKLLEEHNDEFEYKVSWGIDLQTEHERYLTEKIFKKP 348

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP    A       D +     +L    I E+        D  +   R  +   
Sbjct: 349 V-FVTDYPKEIKAFYMKMNEDNKTVAAMDLLVPAIGEIIGGSQREDDLAKLEERITELGM 407

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +         P D DF   L      + +G  +GF+R+VM  TG  NI +VI  P +
Sbjct: 408 K---------PEDYDFYLDLRKYGSTRHAGFGLGFERMVMYATGIANIRDVIPYPRT 455


>gi|42560639|ref|NP_975090.1| asparaginyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|59798545|sp|Q6MUF2|SYN_MYCMS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|42492135|emb|CAE76732.1| asparagine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
          Length = 452

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 111/351 (31%), Gaps = 37/351 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R +          R+    ++  +F E  F+ I S  +  +          F     
Sbjct: 117 AHLRAKTKTFNAIFKIRSAAAYAIHRFFNEKNFVYIHSPIITSNDAEGAGEA--FLVTTR 174

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLE 121
                 K  +     L  S +   +    A  +K++ F   +R        H  EF M+E
Sbjct: 175 EDADYEKDFFGKKASLTVSGQLHAEAFAQA-FKKVYTFGPTFRAENSNTAKHAAEFWMIE 233

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    +  ++   ++++          F          +E     + +      N +
Sbjct: 234 PEVAFADLKDNIQLIQDMVKYIINYI----FKHNRRELEFCNEQLENGLIDKLNNVRNSE 289

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
              T       +   +  QA + G +    D  +           I   +       +  
Sbjct: 290 FKVTTY----TEAIEILKQAVKDGHKFEVSDIEFGLDLGTEHERYICEQVNKAPT-FVTN 344

Query: 241 YPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YP    A       D +     +L    I EL        +  +   R ++   +  ++ 
Sbjct: 345 YPKEIKAFYMKQNDDNKTVAAVDLLVPGIGELVGGSQREDNYEKLIKRCKEVNIDIDQL- 403

Query: 300 NETYPIDEDF--LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  E +  L  L    +S+G  +GF+RLVM +TGA+NI +VI  P +
Sbjct: 404 -------EWYNNLR-LYGYYKSAGFGLGFERLVMYITGASNIRDVIPFPRT 446


>gi|325663723|ref|ZP_08152127.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325470216|gb|EGC73449.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 463

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 101/358 (28%), Gaps = 47/358 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++I  ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFQAVFRVRSLIAYAIHQFFQERGFVYVHTPLITGSDCEGAGEM--FRVTTLD 180

Query: 69  Q---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                           D   K   L  S + + +    A    ++ F   +R        
Sbjct: 181 MENLPKNADGSVDYTKDFFNKETSLTVSGQLNAETYAQA-FRNVYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +  M     +++                  N F+      + +
Sbjct: 240 HAAEFWMVEPEIAFADLDDDMILAEAMLKHIINYV----LENAPEEMNFFNSFVDKGLLD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 + +                    ++   +     +W           +      
Sbjct: 296 RLHNVVSSEFARVTYTE-------AIEILEKNNDKFDFKVSWGVDLQTEHERYLTEE-VF 347

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I EL        D  +   R ++ 
Sbjct: 348 KRPVFVTDYPKDIKAFYMKMNDDNKTVAAVDCLVPGIGELIGGSQREDDYDKLLKRMQEM 407

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +  E Y     +L        + +G  +GF+R VM +TG +NI +VI  P +
Sbjct: 408 N-----LDPEEYQ---FYLDLRKYGSTRHAGFGLGFERCVMYLTGMSNIRDVIPFPRT 457


>gi|119871889|ref|YP_929896.1| asparaginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119673297|gb|ABL87553.1| asparaginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 431

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 66/350 (18%), Positives = 122/350 (34%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           +  +  W R    + +  L  R+ +  +L  YF +N F E+ +     +   G  T  R 
Sbjct: 116 LDVRHLWLRSR--KMQAVLKIRHTVFEALHHYFRKNGFYEVQAPMFITAAVEGGATLFRV 173

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
                   D+  +P+YL  S +F  + L+ +  EK++  A ++R        H  EF   
Sbjct: 174 --------DYFGRPVYLTQSSQFYLEALIYS-LEKVYTIAPSFRAEPSRTRRHLTEFWHA 224

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A  S E   +    +I    E   Q+      +                       
Sbjct: 225 EMEMAWASMEDAARVGEEVISYTVEKVLQERGEELKLLGRKT------------------ 266

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                L+    P   + Y +A +   +   +  W D         +   L  +   IL  
Sbjct: 267 ---EALEKAKPPFYRVSYDEAIEILRKKGLNINWGDDIGADEERAL--TLEFDKPIILYG 321

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKKI 298
           +P    A    +  +P+  +    +   + L     E++   E+ +  ++  +   +  +
Sbjct: 322 FPEKLKAFY--HRNNPQRPEVTLSFD--VLLPEGYGEVIGGGERIYDAKELIDKIIRFGL 377

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D           SG  +G DRLVM +TGA++I +V+  P  
Sbjct: 378 NPEDYQWYIDLRR--YGSVPHSGFGLGVDRLVMWITGADHIRDVVPFPRD 425


>gi|291286674|ref|YP_003503490.1| asparaginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290883834|gb|ADD67534.1| asparaginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 453

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 53/346 (15%), Positives = 104/346 (30%), Gaps = 35/346 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
            H R R          R+    ++ ++F E  F  + +  +  S       +   +T   
Sbjct: 120 AHLRPRTNKYGAIFRIRSEASFAVHQFFRERGFHYVHTPIITGSDCEGAGQMFRVTTLED 179

Query: 65  --ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             + + +D   K  YL  S +   +    A    ++ F   +R        H  EF M+E
Sbjct: 180 TKKPVAEDFFGKAAYLTVSGQLDAESYACA-LGSVYTFGPTFRAENSNTPRHAAEFWMIE 238

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A       M      ++       +       +  N   +       E  A+  N+ 
Sbjct: 239 PEMAFADIHDNMTLAEEFVKYLIWFLMENCKEDLELFFNFVDK-------ELEAKLTNM- 290

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                ++ ++ +        + +G +  +   +           +           +  Y
Sbjct: 291 ---LTNDFERVEYREAVKILENSGEKFEYPVGFGVDLQTEHERYLTEKHFKKPV-FVYNY 346

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            D       +L      L  +  EL+   ++  R +      +K+   
Sbjct: 347 PKSIKPFYMRQNDDGETVAAMDL------LVPSVGELIGGSQREERLDVLDSAIEKMGLS 400

Query: 302 TYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                    A L        +G  +GF+RL+M VTG  NI +VI  
Sbjct: 401 MEEYGW--YAELRKYGTVPHAGFGLGFERLLMFVTGVTNIRDVIPF 444


>gi|332707301|ref|ZP_08427354.1| asparaginyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332354035|gb|EGJ33522.1| asparaginyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 462

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 114/357 (31%), Gaps = 45/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF------ 62
           H R R          RN   +++ ++F E  F+ + +  +  S       + +       
Sbjct: 122 HLRSRTNTLGAVFRVRNACSNAIHQFFQERGFLWVHTPIITASDCEGAGELFSVTNLDLK 181

Query: 63  ---STELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
               T+    D+      +P YL  S +    +++A     ++ F   +R        H 
Sbjct: 182 NIPKTDNQAVDYTQDFFGRPTYLTVSGQLEA-EIMAMAFRDVYTFGPTFRAENSNTSRHL 240

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF-QNVNCNPFSEPEYITVAEA 173
            EF M+E   A    +  M      ++   +   +      +  N    +          
Sbjct: 241 AEFWMVEPEMAFCDLKGDMDLAEAFLKHVFKSVLENCPEDLEFFNKRIDNNVLATADNII 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++  I     +   ++ DR   Y  +    ++  H+   ++   +             
Sbjct: 301 NNQFERITYTDAIALLEKTDRKFEYAVSWGVDLQSEHERYLAEELFK------------- 347

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP    A       D +             L     E++   ++  R   ++ 
Sbjct: 348 KPVIVTDYPVEIKAFYMRLNDDQKTVAAM------DVLAPRIGEIIGGAQREERL--DIL 399

Query: 294 EKKKIYNETYPID-EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           EK+       P D   +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 400 EKRIQNQGMNPEDLWWYLDLRRYGTVPHAGFGLGFERLVQFMTGMGNIRDVIPFPRT 456


>gi|311745878|ref|ZP_07719663.1| asparagine--tRNA ligase [Algoriphagus sp. PR1]
 gi|311302438|gb|EAZ80360.2| asparagine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 483

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 60/364 (16%), Positives = 116/364 (31%), Gaps = 39/364 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI------ 59
            H R R          R+ +  ++ +YF +  F  I +  +  S      ET        
Sbjct: 124 AHLRMRTNTFSAVFRVRHALAFAVNKYFNDKGFFYIHTPIITASDAEGAGETFKVTTLDL 183

Query: 60  -RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T+    D+      +   L  S +    +L A    +I+ F   +R        H
Sbjct: 184 KNPPLTKDGDIDYREDFFEREANLTVSGQL-EGELAAMALSEIYTFGPTFRAENSNTARH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E       + ++   + A     S         +E E     + 
Sbjct: 243 LAEFWMIEPEMAFYDAEDNQDLAEDFLKYIIQYALDNCGSDLEFLDKRLAEEEKGKPQDQ 302

Query: 174 FARYANIDLGTT--------LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +    ++            L   +  D        ++       D+  +D+ S      
Sbjct: 303 RSEMGLVEKLKFVAENEFVRLTYTEAIDILRNSKPNKKKKFAYLIDEWGADLQSEHERYL 362

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E +       IL  YP    +       D +     ++    I       E++   ++ 
Sbjct: 363 VEKH--FKKPVILTDYPKEIKSFYMRQNDDGKTVAAMDILFPGI------GEIVGGSQRE 414

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R +   Q  +++      +   +L          +G  +GF+R+V+ VTG +NI +VI 
Sbjct: 415 ERLDVLTQRMEEMNIPQDEM-WWYLDTRRFGATPHAGFGLGFERMVLFVTGMSNIRDVIA 473

Query: 345 TPFS 348
            P +
Sbjct: 474 FPRT 477


>gi|300711961|ref|YP_003737775.1| aspartyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125644|gb|ADJ15983.1| aspartyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 432

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 61/338 (18%), Positives = 114/338 (33%), Gaps = 38/338 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
                +     R  +  ++RE F E    EI++  +  + G E       TEL    +  
Sbjct: 126 RKEETKAIFEIRAEVLRAVRESFREIGCTEINTPKIVAT-GTEGG-----TELFPITYFG 179

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           +  ++  SP+   + ++ +G E++F     +R  E     H  E TM+++  A   +E+ 
Sbjct: 180 QEAFMNQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATMIDFESAFIDHEEA 239

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M  C   +  A E   +   +          E      AE F R    +    ++   + 
Sbjct: 240 MDACERTLLAAYEGVAENCEAQLETLGYDDFEVP----AEGFPRLTYEEAIERINATGEL 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           D  L+                W D       + +  ++G      +  +P+         
Sbjct: 296 DEQLV----------------WGDDLPTEGEKALGDDVG--GHYFVTDWPSEIKPFYIQD 337

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
                 +K F+L    +EL +              FE++        +      E +   
Sbjct: 338 HEGGELSKGFDLMHPRMELVSGGQREHRYDHLVEGFEQQ------GLDPAQF--EYYTKM 389

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
               MP  +G A G +RLVM +    NI E +  P  +
Sbjct: 390 FKYGMPPHAGWAYGVERLVMTMLDLGNIREAVLFPRDR 427


>gi|56750719|ref|YP_171420.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|56685678|dbj|BAD78900.1| asparaginyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 462

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 101/357 (28%), Gaps = 44/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
            H R R       +  RN   +++ ++F E  F+ + +  +  S       +  F+    
Sbjct: 122 AHLRPRTNSLGAVMRVRNAAATAIHDFFQERGFLWVHTPIITASDCEGAGEL--FTVTNL 179

Query: 65  -----------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          QD   K  YL  S +    +++  G   ++ F   +R        
Sbjct: 180 DLDKLGQSQQAPDFEQDFFGKRAYLTVSGQLEA-EIMGLGFSNVYTFGPTFRAENSNTSR 238

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M      ++   +  + +                      
Sbjct: 239 HLAEFWMVEPETAFCDLGGDMDLAEAFLKFVFQRVSDRCSEDLEFF-----------NQR 287

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
             +   N       ++ ++          ++A     +   W           +      
Sbjct: 288 IDSEVLNRAETILNNDFERVSYTDAIALLEKADRSFDYPVAWGIDLQSEHERYLAEEYFR 347

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               I+  YP    AL      D +             L     E++   ++  R     
Sbjct: 348 KPL-IVYDYPREIKALYMRLNDDQKTVAAM------DVLAPGIGEIIGGSQREERLGVLK 400

Query: 293 QEKKKIYNETYPIDEDFLAC-LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           Q   +           +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 401 QRLAEANLPEENY-WWYLDLWRYGSVPHAGFGLGFERLVQFITGMGNIRDVIPFPRT 456


>gi|332288091|ref|YP_004418943.1| asparaginyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330430987|gb|AEC16046.1| asparaginyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 467

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 111/356 (31%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 TNLPKTEQGEIDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++   +    +    +  +   F++    TV   
Sbjct: 245 LAEFWMVEPEMAFATLADNAKLAEDMLKYVFKAVLDE----RMDDMEFFAKHIDNTVISR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + + D           D        +++G +      W    S      +      +
Sbjct: 301 LQDFISSDFAQV-------DYTDAIEILKKSGKKFEFPVEWGIDLSSEHERYLAEEHFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++  +    D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMDEMGLKKE--DYWWYRDLRRYGTVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|270292428|ref|ZP_06198639.1| asparagine--tRNA ligase [Streptococcus sp. M143]
 gi|270278407|gb|EFA24253.1| asparagine--tRNA ligase [Streptococcus sp. M143]
          Length = 447

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 120/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +    +      +     +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLDRAPQALEI-LERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLREHENDADADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|119774820|ref|YP_927560.1| asparaginyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166231672|sp|A1S684|SYN_SHEAM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|119767320|gb|ABL99890.1| asparaginyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 466

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 64/372 (17%), Positives = 113/372 (30%), Gaps = 49/372 (13%)

Query: 3   QIPSQPW---WNRD-FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            + ++       RD  H R R  +       RN +  ++  ++ EN FI + +  +  S 
Sbjct: 110 PMAAKRHSIEHLRDVAHLRPRTNIIGAVARVRNCLSQAIHRFYHENGFIWVSTPIITASD 169

Query: 53  --PGNETHIRA-------FSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
                E    +         T+    D+      K  +L  S + + +    A   KI+ 
Sbjct: 170 CEGAGEMFRVSTLDMENLPRTDAGKVDYDQDFFGKEAFLTVSGQLNGETYACA-LSKIYT 228

Query: 100 FAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN 158
           F   +R        H  EF M+E   A      +     ++++       Q+    +  +
Sbjct: 229 FGPTFRAENSNTSRHLAEFWMVEPEVAFADLNDIAGLAESMLKYCFNAVLQE----RMDD 284

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
              F+E    +V +    + + D           D        Q  G    +   W    
Sbjct: 285 MKFFAERVDGSVIDRLQSFVSSDFAQV-------DYTDAVEILQNCGKTFEYPVEWGIDL 337

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDE 277
                  +          +   YP    A       D +     ++ A  I E+      
Sbjct: 338 QSEHERYLAEEHFKAPVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQR 396

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTG 335
                    R E+    K+         D  +   L        +G  +GF+RLV  VTG
Sbjct: 397 EERLDVLDARLEEMNLSKE---------DYWWYRDLRRYGTVPHAGFGLGFERLVSYVTG 447

Query: 336 ANNINEVIWTPF 347
             NI +VI  P 
Sbjct: 448 VGNIRDVIPFPR 459


>gi|239629035|ref|ZP_04672066.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519181|gb|EEQ59047.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 463

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 106/359 (29%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++I  ++ +YF E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFQAVFRVRSLIAYAIHQYFQERDFVYVHTPLITGSDCEGAGEM--FQVTTLD 180

Query: 69  QD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
            +             +  +     L  S + + +    A    ++ F   +R        
Sbjct: 181 LNNIPKTEDGKVDFSQDFFNKATNLTVSGQLNAETYAMA-FRNVYTFGPTFRAENSNTAR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +  M+    +++                  N F++     + E
Sbjct: 240 HAAEFWMIEPEMAFADLDDDMRLAEGMLKYIIRFV----LEHAPEEMNFFNQFVDKGLLE 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N + G                  ++      +  +W           +   +  
Sbjct: 296 RLNNVLNSEFGHITYTD-------AVELLEKHNDEFDYKVSWGCDLQTEHERYLTEKVFK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        +  +   R ++ 
Sbjct: 349 KPV-FVTDYPKEIKAFYMKMNPDNKTVAAVDCLVPGIGEIIGGSQREDNLDKLVARMDEL 407

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              K+         D DF   L      + +G  +GF+R VM +TG  NI +V+  P +
Sbjct: 408 GLRKE---------DYDFYLDLRKYGSTRHAGFGLGFERCVMYLTGMGNIRDVVPFPRT 457


>gi|322387310|ref|ZP_08060920.1| asparagine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321141839|gb|EFX37334.1| asparagine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 447

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DE 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVINYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + + + +  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMESLGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 LTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|305662513|ref|YP_003858801.1| aspartyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304377082|gb|ADM26921.1| aspartyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 435

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 65/367 (17%), Positives = 120/367 (32%), Gaps = 59/367 (16%)

Query: 3   QIPSQPWW----NRDFHYRRRPFLLKRNMI----------QSSLREYFVENQFIEIDSM- 47
            +P         + D   R R   L+RN +             +R+      FIE+ +  
Sbjct: 107 PLPLDVSGKVSADLDTRLRERVLDLRRNEMRAIVRIADTTLRVIRDTLRSMGFIEVFTPK 166

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +     ++           +  +  +L  SP+   K+LLAA  E++F    AWR  
Sbjct: 167 IIATATEGGANLFPVI-------YFGREAFLAQSPQLY-KELLAASLERVFEIGPAWRAE 218

Query: 108 EQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  EF  ++   A   YE +MK    +I        ++                
Sbjct: 219 ESDTPYHLAEFISVDIEAAFMDYEDVMKILEKLIEQILTTLRKEH--------------- 263

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                E   +    +L +      +          Q  G  +   D       R L  KI
Sbjct: 264 -----EDDLKILKHELPSISIPLPRIKYTEAIEILQNEGFNIKFGDDLGTPELRALSLKI 318

Query: 227 EPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
                      +  +P    +       ++P  ++ F+L   +IEL +    +       
Sbjct: 319 GHE-----LYFITEFPTKIRAFYTKPMDSNPELSESFDLVWRHIELASGSSRIHKKDMLI 373

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
                   + + +  E +     F+      MP  +G  +GF RL++++TG +N+ EV  
Sbjct: 374 E-----ALKSRGLNVENFQY---FIKWFDYGMPPHAGWGLGFSRLLLMLTGRSNVKEVTL 425

Query: 345 TPFSQSN 351
            P  +  
Sbjct: 426 FPRDKKR 432


>gi|226322404|ref|ZP_03797922.1| hypothetical protein COPCOM_00172 [Coprococcus comes ATCC 27758]
 gi|225209204|gb|EEG91558.1| hypothetical protein COPCOM_00172 [Coprococcus comes ATCC 27758]
          Length = 463

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 103/359 (28%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +  F    +
Sbjct: 122 AHLRPRTNTFQAVFRVRSLTAYAIHKFFQERGFVYVHTPLITGSDCEGAGEM--FQVTTL 179

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +             K  +     L  S + + +    A    I+ F   +R       
Sbjct: 180 DMNNVPKNADGTVDYSKDFFGKETNLTVSGQLNGETYAQA-FRNIYTFGPTFRAENSNTT 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E  M    N+++                  N F+      + 
Sbjct: 239 RHAAEFWMIEPEIAFADLEDDMILAENMLKYVIRYV----MENAPEEMNFFNSFVDKGLI 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D                    ++   +  +  +W           +   + 
Sbjct: 295 DRLNNVVNSDFARVTYTE-------AIEILEKHNDKFEYKVSWGADLQTEHERYLTEEIY 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +     I       +  D  +     +  
Sbjct: 348 KRPV-FVTDYPKEIKAFYMKMNDDNKTVAAVDCLVPGIGEIIGGSQREDDYD-----KLV 401

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K+    E    D  F   L      + +G  +GF+R +M +TG +NI +VI  P +
Sbjct: 402 ARMKELGLKEE---DYGFYLDLRKYGSTRHAGFGLGFERCIMYLTGMSNIRDVIPFPRT 457


>gi|300722558|ref|YP_003711848.1| asparagine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629065|emb|CBJ89650.1| asparagine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 466

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 111/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFHEKGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         QD   +  +L  S + + +    A    ++ F   +R        H
Sbjct: 185 QNLPRTDKGEVDFSQDFFGREAFLTVSGQLNGEAYACA-LSNVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      + K   ++++   + A ++    +  +   F+E     V   
Sbjct: 244 LAEFWMVEPEVAFADLNDIAKLSEDMLKYVFKAALEE----RADDLAFFAERVDKDVITR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ + D         Q D        +  G +  +   W    S      +       
Sbjct: 300 LEKFVDSDFI-------QLDYTDAIKILENCGQKFENPVFWGVDLSSEHERYLAEKHFEA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 353 PVIMK-NYPKNIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDMLDK 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +++       D  +   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 406 RLEEMGL--NKEDYWWYRDLRRYGTVPHAGFGLGFERLVAYVTGVANVRDVIPFPRT 460


>gi|291523160|emb|CBK81453.1| asparaginyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 464

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++I  ++ ++F E  F+ + +  +  S       +   +T   
Sbjct: 123 THLRARTNTFEAVFRVRSLIAYAIHQFFQERDFVYVHTPLITGSDCEGAGEMFQVTTMDL 182

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   KP  L  S +    +  A     I+ F   +R        H
Sbjct: 183 NNVPKNEEGKVDFSEDFFGKPTNLTVSGQL-NGETFAMAFRNIYTFGPTFRAENSNTTRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M+   ++++         +          F++     + E 
Sbjct: 242 AAEFWMIEPEIAFADLQDDMELAESMMKY----VIGYVLEHAPEEMKFFNQFVDKGLLER 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                  D G                  ++      +  +W           +   +   
Sbjct: 298 LEHVRTSDFGRVTYTE-------AIELLEKHNDEFDYKVSWGCDLQTEHERYLTEKI-FK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +     ++    I E+    +   D  +   R     
Sbjct: 350 RPVFVTDYPKDIKAFYMKQNPDGKTVAAMDMLVPGIGEIIGGSERENDYDKLLTR----- 404

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+    E    D  F   L      + +G  +GF+R VM +TG  NI +VI  P +
Sbjct: 405 -MKELGLKEE---DYSFYLDLRKYGSTRHAGFGLGFERCVMYLTGMGNIRDVIPFPRT 458


>gi|167536188|ref|XP_001749766.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771693|gb|EDQ85355.1| predicted protein [Monosiga brevicollis MX1]
          Length = 600

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 115/351 (32%), Gaps = 47/351 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               ++ + +  R + +   F EI S  +  +  +E+    F
Sbjct: 276 DVRLDNRILDLRAEPNQAIFKLQSGVGALFRNFLLGEGFTEIHSPKIIGAA-SESGSTVF 334

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             E     +   P +L  SP+   +  +AA  E++F     +R  +     H  EFT ++
Sbjct: 335 KLE-----YFGSPAFLAQSPQLYKQMAIAADFERVFEIGPVFRAEDSNTHRHLTEFTGMD 389

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
           +  A   +   + D ++ +  +      + F  +    N     E     E   R     
Sbjct: 390 FEMAFYEHYHEVLDVVDRLFVSIFKGLTEKFGHEIAMVNKQFNREPFKWLEPTLR----- 444

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                      +        ++AG  +   D  S    ++L   ++     +   ILD++
Sbjct: 445 ----------LEWPEGIAMLREAGEVIGDFDDISTPQEKLLGRLVKEKYDTD-FYILDKF 493

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P             +P ++  ++L     E+ +    + DP     R             
Sbjct: 494 PLNIRPFYTMPDAKNPAYSNSYDLMMRGEEIMSGAQRIHDPALLEER-------ATAHGL 546

Query: 301 ETYPIDE--DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +DE   ++       P  +G  +G +R+VML  G  NI +    P  
Sbjct: 547 S---LDEIKAYIDAFRYGCPPHAGGGVGMERVVMLFLGLPNIRKTSLFPRD 594


>gi|322375594|ref|ZP_08050106.1| asparagine--tRNA ligase [Streptococcus sp. C300]
 gi|321279302|gb|EFX56343.1| asparagine--tRNA ligase [Streptococcus sp. C300]
          Length = 447

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +    +            +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLDRA-PQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R++    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMITFAAGTKHIREAIPFPRM 441


>gi|262197984|ref|YP_003269193.1| asparaginyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262081331|gb|ACY17300.1| asparaginyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 466

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 53/375 (14%), Positives = 112/375 (29%), Gaps = 47/375 (12%)

Query: 3   QIPSQPW--WNRD-FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
             P +    + R+  H R R  +       R+ +  ++  +F E+ F  I +  +  S  
Sbjct: 111 MQPKRHSMEYLREVAHLRPRTNIIGAVTRVRHSLSQAIHRFFHEHGFFWIHTPIITASDA 170

Query: 54  GNETH---------IRAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                              T     D+      +  +L  S + + +    A   +++ F
Sbjct: 171 EGAGEMFRVSTLDMANLPRTPEGGVDYDKDFFGREAHLTVSGQLNVETYCLAMS-RVYTF 229

Query: 101 AHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A       +      ++       ++    +  + 
Sbjct: 230 GPTFRAENSNTRRHLAEFWMIEPEIAFADLGDDITLAEQFLKYIFAEVLRE----RADDM 285

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
             F +       E   +       +     D  D      +A++   +     +W     
Sbjct: 286 AFFDKWVDKGCIERTEKLL----ASPFTRMDYSDAVRELEKAKK---KFEFPVSWGADLQ 338

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +   +      ++  YP    A       D +             L     E++
Sbjct: 339 SEHERFLTEKVVGGPVAVV-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 391

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R E   +   ++  E  P    +   L        +G  +GF+R +  +TG +
Sbjct: 392 GGSQREERLEVLDKRIAEVGLEPEPY--WWYRDLRRYGTVPHAGFGLGFERAIQYLTGVD 449

Query: 338 NINEVIWTPFSQSNQ 352
           NI +VI  P +   Q
Sbjct: 450 NIRDVIPFPRA-PRQ 463


>gi|307243900|ref|ZP_07526025.1| asparagine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492722|gb|EFM64750.1| asparagine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 466

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 108/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          R+++  +L ++F E  F+   +  +  S       +        
Sbjct: 125 AHLRPRSNTFSAVFRVRSVVAFALHKFFNERNFVYAHTPLITGSDTEGAGEMFRVTTLDM 184

Query: 60  -RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                T+    D+      K   L  S +    +++A     I+ F   +R        H
Sbjct: 185 ENPPLTKDGKVDYSKDFFGKEANLTVSGQL-NGEIMALAFRNIYTFGPTFRAENSYTGRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E        E  M    ++I+                    F+      + E 
Sbjct: 244 ASEFWMVEPEIVFADLEDNMDLAEDMIKYVINYV----LEHCPEEMAFFNSFIDKGLLER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N        N  +           ++G +  +   W           I      N
Sbjct: 300 LDNILN-------SNFKRITYTEAVDILIKSGQKFEYPVEWGCDLQTEHERYITEQ-VYN 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +  +  +L    +       E++   ++  R++  M 
Sbjct: 352 APVFVTDYPKDIKAFYMRMNEDGKTVRAMDLLVPGV------GEIIGGSQREERYDVLMN 405

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +++          +L          SG  +GF+R++M +TG +NI +VI  P +
Sbjct: 406 RIQELGLNEEEY-WWYLELRKFGTATHSGFGLGFERIIMYLTGMSNIRDVIPFPRT 460


>gi|328957365|ref|YP_004374751.1| asparagine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673689|gb|AEB29735.1| asparagine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 432

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 61/351 (17%), Positives = 107/351 (30%), Gaps = 45/351 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   +  RN I  +   +F E  FI++D   L  +   ++      
Sbjct: 115 MDHRHLWLRSS--KQHAIMRIRNEIIRATYNFFNEEGFIKVDPPILTANAAEDS------ 166

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   ++  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E 
Sbjct: 167 TELFHTEYFDQEAFLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEP 225

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +EQ ++     +    +          N               E   +Y  +  
Sbjct: 226 EMAFMDHEQSLEVQEKYVAYLIQSVLDNCDDALNTLERD---------KEVLKKYTELPY 276

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                               + G     D TW D F       I      +    +  YP
Sbjct: 277 PRISY-------DDAVTLLNENGFD---DITWGDDFGSPHETFIANQY--DKPVFILNYP 324

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE-MQEKKKIYN 300
               +     +P         +L A          E++   E+   F+    + K     
Sbjct: 325 KAIKAFYMKPHPEREDVVLCADLIAP-----EGYGEIVGGSEREVDFDALSQRIKDFGLK 379

Query: 301 E---TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E    + +D   L         SG  +G +R V  + G  +I E I  P  
Sbjct: 380 EEDYAWYMD---LRK-YGSVPHSGFGLGLERTVTWICGTEHIRESIPFPRL 426


>gi|325967662|ref|YP_004243854.1| asparaginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323706865|gb|ADY00352.1| asparaginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 429

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 116/346 (33%), Gaps = 36/346 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R    L  R+ +  ++ E+F    + E+       +   E     F 
Sbjct: 113 LDVRHLWVRSR--RMWAVLRVRHTVFGAIHEFFRSRDYYEVQGPMFVSAAV-EGGATLFP 169

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +       R+ +YL  S +F  + L+ A  E+++  A ++R        H  EF   E 
Sbjct: 170 VKYFD----REDVYLTQSSQFYLEILIYA-LERVYTIAPSFRAESSRTRRHLTEFWHAEA 224

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +  L+    ++I    +   ++                     +   +  N D 
Sbjct: 225 EEAWLQFNDLLNLLEDLITYVVDKVLKE--------------------RQDELKLLNRD- 263

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L+N   P   + Y +A +          W D       + +   +  +   +L  +P
Sbjct: 264 TKVLENVKPPFYRVSYDEAIEILRSKGLKIKWGDDIGADEEKVL--TMQFDKPILLHHFP 321

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
               A    +  DP+  +        +       E++   E+ + +E+ + + KK     
Sbjct: 322 EQVKAFY--HRNDPQRPETTLSVD--VLAPEGYGEIVGGGERIYDYEELLGKIKKFGLRP 377

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              D             +G  +G DRLVM V G ++I + +  P  
Sbjct: 378 EDYDWYLDLRRYGSVPHAGFGLGIDRLVMWVCGLDHIRDAVPFPRD 423


>gi|294936249|ref|XP_002781678.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
 gi|239892600|gb|EER13473.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
          Length = 747

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 108/365 (29%), Gaps = 44/365 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  L       R+ +  ++  +F+   F  + +  +  +       +  F    +
Sbjct: 389 AHLRPRTNLIGAVARVRSSLSGAVHAFFMSRDFKYVHTPLITSADCEGAGEM--FQVTSL 446

Query: 68  ----------------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                                  QD   +P YL  S + + +    A    ++ F   +R
Sbjct: 447 LQKAEGAHQDVKIDSNTGRFDYKQDFFGRPTYLTVSGQLNVENYACA-LSDVYTFGPCFR 505

Query: 106 NGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                   H  EF M+E           MK     I+  A        +    +   F +
Sbjct: 506 AENSHTSRHLAEFWMIEPELCFADIHDNMKCAEEFIQHCARHV----LAHCREDIAFFDK 561

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
                + +        +    +   +  D+ L   +  +A      +  W          
Sbjct: 562 FIEKGLIKR-LENLIAEPFARVSYTEAIDKLLKAQKNGKAKFENT-NIYWGFDLDSEHER 619

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +   +      I+  YPA   A            +  +  A    L     E+     +
Sbjct: 620 YLTEKIYKKPV-IVYNYPAAIKAFYMRANEADED-ESKQTVAAMDILAPLVGEVCGGSVR 677

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT--EMPQSSGIAMGFDRLVMLVTGANNINEV 342
             R   ++ +KK         D  +   L        +G  +GF+RL+M++TG  NI +V
Sbjct: 678 EERL--DVLDKKLSDLNMDVEDYWWYRDLRRFGSVPHAGFGIGFERLIMMMTGVENIRDV 735

Query: 343 IWTPF 347
           I  P 
Sbjct: 736 IPYPR 740


>gi|78355146|ref|YP_386595.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123755034|sp|Q317J6|SYN_DESDG RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|78217551|gb|ABB36900.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 461

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 110/356 (30%), Gaps = 42/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
            H R R          R     ++  +F EN F  + +  L  S       +   +T   
Sbjct: 121 AHLRPRTNKFGAAFRIRAEASYAVHSFFRENGFFNVHTPILTGSDCEGAGEMFRVTTLPA 180

Query: 65  ---------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                     +   D   K   L  S +    +++A    K++ F   +R        H 
Sbjct: 181 VGASAPAEGSVFDGDFFGKECSLTVSGQLEA-EIMAQSLGKVYTFGPTFRAENSNTPRHA 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E  M+   ++++         +      + + F +       E  
Sbjct: 240 AEFWMVEPEMAFADLEDDMQLAEDMVKY----VISHVMKHCAADLDLFCKFVD---KELS 292

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
           AR  NI          +          + +G +  +   W           +        
Sbjct: 293 ARLENI----LAHPFARVSYTEAIEILKASGRKFEYPAEWGADLQTEHERYLAEEHFKKP 348

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEMQ 293
              +  YP    A       D +     +L    I       EL+   ++  R +  E +
Sbjct: 349 V-AVYDYPKEIKAFYMRLNDDGKTVAAMDLLVPRI------GELVGGSQREERLDVLEAR 401

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K+   N        +L          +G  MGF+RL+ML+TG  NI +VI  P +
Sbjct: 402 IKELGQNPDDY--WWYLELRKFGTAPHAGFGMGFERLLMLLTGIGNIRDVIPFPRT 455


>gi|317498655|ref|ZP_07956948.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894142|gb|EFV16331.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 461

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 103/357 (28%), Gaps = 47/357 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELII 68
           H R R          R+ I  ++ ++F E  F+ + +  +          +  F    + 
Sbjct: 123 HLRPRTNTFQAVFRVRSQIAYAIHKFFQERDFVYVHTPLITGQDCEGAGEM--FQVTTMD 180

Query: 69  QD--------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
            +           +  +     L  S + + +    A    I+ F   +R  +     H 
Sbjct: 181 LNKIAEEGKVDYEQDFFKKPVSLTVSGQLAGETFAQA-FRNIYTFGPTFRAEDSNTTRHA 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E  M     +I+                    F++     + E  
Sbjct: 240 AEFWMIEPEIAFADLEDNMILAEQMIKYIINYV----MEHAQEELQFFNKFVDKGLLERL 295

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               + D G                  ++      +  +W           +   +    
Sbjct: 296 NHVVSSDFGRVTYTE-------AVKLLEEHNDEFEYKVSWGIDLQTEHERYLTEQIFKKP 348

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP    A       D +     +L    I E+        D  +   R  +   
Sbjct: 349 V-FVTDYPKEIKAFYMKMNEDNKTVAAMDLLVPAIGEIIGGSQREDDLAKLEERITELGM 407

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +         P D DF   L      + +G  +GF+R+VM  TG  NI +VI  P +
Sbjct: 408 K---------PEDYDFYLDLRKYGSTRHAGFGLGFERMVMYATGIANIRDVIPYPRT 455


>gi|157151520|ref|YP_001450575.1| asparaginyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076314|gb|ABV10997.1| asparaginyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 465

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 121/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 142 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 193

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 194 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 252

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 253 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 311

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 312 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 349

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +      P +P      +L            E++    +   ++  + 
Sbjct: 350 PTFVVNYPAAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 404

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 405 KMNDLGMDTTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 459


>gi|15789697|ref|NP_279521.1| aspartyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169235411|ref|YP_001688611.1| aspartate--tRNA ligase [Halobacterium salinarum R1]
 gi|3122880|sp|O07683|SYD_HALSA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2209068|dbj|BAA20527.1| aspartyl-tRNA synthetase [Halobacterium salinarum]
 gi|10580067|gb|AAG19001.1| aspartyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167726477|emb|CAP13262.1| aspartate--tRNA ligase [Halobacterium salinarum R1]
          Length = 436

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 65/345 (18%), Positives = 115/345 (33%), Gaps = 45/345 (13%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI 67
           + H   R          R+    ++ ++F +N+F E+D+  L  + G E     F     
Sbjct: 122 ERHLDVRKPSTKAVFSLRSKAMGAMTDWFYDNRFEEVDTPEL-STAGAEGGADLFPV--- 177

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAH 126
              +  K  YL  SP+   + L+A+G +++F   HA+R  + G   H  E  M +    +
Sbjct: 178 --VYYDKEAYLSQSPQLYKQILVASGVDRLFEVGHAFRAEDFGTSRHVSEIAMFDVELGY 235

Query: 127 -ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG-T 184
            E +  +M      +R                          +  A+        DL   
Sbjct: 236 VEDHHDVMDVQEESLRHTIRHV--------------------VEHAQRELDELGSDLSVP 275

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
             D P         + A +       D+       R+L E  E     +    +  YP  
Sbjct: 276 EADFPRITFEEAREILADEYDHVPEDDNDLDTKGERLLGEYFEEQG--HPAVFVVGYPDE 333

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           +         D   +++F+L     EL +      D      R     + +++       
Sbjct: 334 KFYYRQDVDGDDVASRKFDLLYRGQELSSGGQREHDI----ERLT--AKMREQGVEPENF 387

Query: 305 IDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E +L      +P   G  +G DRL+  + G +NI E I  P  
Sbjct: 388 --EFYLDAFRYGVPPHGGYGLGIDRLIQQLAGLDNIKEAILFPRD 430


>gi|256545395|ref|ZP_05472758.1| asparagine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398956|gb|EEU12570.1| asparagine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 462

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 112/356 (31%), Gaps = 39/356 (10%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
                R    R     R+ +  +L ++F E  FI +++  +  S       +   +T+  
Sbjct: 119 PHLRARTNTYRAVFRLRSKLAYALHKFFQERGFIYLNAPLITASDTEGAGEMFQVTTQNL 178

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K  YL  S +   +    A    I+ F   +R  E     H
Sbjct: 179 DKLDLNKDGKVDYSKDFFGKKSYLTVSGQLEAEDYALA-LSNIYTFGPTFRAEESNTPRH 237

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A   Y   M    ++++                    F+E    T+ E 
Sbjct: 238 AAEFWMIEPEIAFADYNVCMDVAEDMMKYMISFV----LENCKDEIEFFNERVDDTLIER 293

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             +  +                    + Q+A +   +   W           +   +   
Sbjct: 294 LTKVKDAKFARITYTE-------AIEKLQEADVDFEYPVKWGMDLQTEHERYLSEKIVDG 346

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +    F        L  A  EL+   ++  R+++ ++
Sbjct: 347 PV-FVTDYPKDIKAFYMRRNEDGKTVAAF------DMLVPAVGELIGGSQREERYDELVK 399

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +    +     +++L          SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 400 SMEDNGLKLEDY-QNYLDLRKYGTVVHSGYGLGFERAVMYLTGMKNIRDVIPYPRT 454


>gi|294877918|ref|XP_002768192.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
 gi|239870389|gb|EER00910.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
          Length = 745

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 61/365 (16%), Positives = 108/365 (29%), Gaps = 45/365 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  L       R+ +  ++  +F+   F  + +  +  +       +  F    +
Sbjct: 388 AHLRPRTNLIGAVARVRSSLSGAVHAFFMSRDFKYVHTPLITSADCEGAGEM--FQVTSL 445

Query: 68  ----------------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                                  QD   +P YL  S + + +    A    ++ F   +R
Sbjct: 446 LQKAEGAHQDVKVDPKTGRFDYKQDFFGRPTYLTVSGQLNVENYACA-LSDVYTFGPCFR 504

Query: 106 NGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                   H  EF M+E           MK     I+  A        +    +   F +
Sbjct: 505 AENSHTSRHLAEFWMIEPELCFADIHDNMKCAEEFIQHCARHV----LAHCREDIAFFDK 560

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
                + +       I       +  +    LL  Q          +  W          
Sbjct: 561 FIEKGLIKRLENL--IAEPFARVSYTEAIEKLLKAQKSGKTKFENTNIYWGFDLDSEHER 618

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +   +      I+  YPA   A      AD   +K+    A    L     E+     +
Sbjct: 619 YLTEKIYKKPV-IVYNYPAAIKAFYMRANADEEPSKQT--VAAMDILAPLVGEVCGGSVR 675

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT--EMPQSSGIAMGFDRLVMLVTGANNINEV 342
             R   ++ +KK         D  +   L        +G  +GF+RL+M++TG  NI +V
Sbjct: 676 EERL--DVLDKKLSDLNMDIEDYWWYRDLRRFGSVPHAGFGIGFERLIMMMTGVENIRDV 733

Query: 343 IWTPF 347
           I  P 
Sbjct: 734 IPYPR 738


>gi|306829853|ref|ZP_07463040.1| asparagine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304427864|gb|EFM30957.1| asparagine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 447

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 293 AIDLLQEHENDADADYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVINYP 339

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + + +++  +
Sbjct: 340 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMEELGMD 394

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 395 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|329765408|ref|ZP_08256988.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138314|gb|EGG42570.1| aspartyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 428

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 67/370 (18%), Positives = 128/370 (34%), Gaps = 68/370 (18%)

Query: 1   MHQIPSQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDS 46
           +H +P  P    + +   R                   R+ +   LR+   E +FIEI +
Sbjct: 99  IHPLPVDPIGRLESNIDTRLNHRALDMRNQKTASIFKLRHHVLEILRKTLAEKKFIEITT 158

Query: 47  M-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
              +  +     ++          D+  K  YL  SP+   K+ +  G E+++  ++ +R
Sbjct: 159 PKIIGSASEGGANL-------FSLDYFGKTAYLAQSPQLY-KEQMTIGLERVYEISNFYR 210

Query: 106 NGE-QGCLHQPEFTMLEWYRAHESYEQLMKD----CMNIIRCAAEVANQKIFSFQNVNCN 160
                   H  EFT ++   A   Y  +M       M + +  +    ++  +  +    
Sbjct: 211 AENSHTGRHLSEFTSIDIEAAFMDYNDVMNILESLVMEVYKFVSVNCKKEQENIGHTIEI 270

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
           P S  E IT  +                        +  + ++ G ++   D   D+   
Sbjct: 271 PKSPFERITYTQ------------------------VIEELKKVGEKIEFGD---DLLDS 303

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELL 279
            L    + + G      L  +P             D + ++ F+L    +EL +    L 
Sbjct: 304 HLRIIGKNHPGF---YFLTDWPMKLKPFYIREKDEDSKLSRSFDLQYGYLELSSGGTRLH 360

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           +P   + R +++        + T   D   L      MP  SG  MG DRL+  + G +N
Sbjct: 361 NPETLKSRLKEQ------GLDPTQFADH--LQTFDWGMPPHSGWGMGLDRLMTTLIGIDN 412

Query: 339 INEVIWTPFS 348
           + EV+  P  
Sbjct: 413 VREVVLYPRD 422


>gi|238795874|ref|ZP_04639387.1| Asparaginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238720337|gb|EEQ12140.1| Asparaginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 466

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 113/363 (31%), Gaps = 55/363 (15%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---------------- 52
            H R R  L       R+ +  ++  +F EN +  + +  +  S                
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 53  ---PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              P  +T    FS     +D   K  +L  S + + +   +A   K++ F   +R    
Sbjct: 185 ENLPRTDTGAVDFS-----EDFFGKEAFLTVSGQLNGETYASA-LSKVYTFGPTFRAENS 238

Query: 110 GC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A  S + +      +++   +       + +  +   F+E    
Sbjct: 239 NTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAV----LNERADDMKFFAERVDK 294

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +   R+   D                    + +G +  +D +W    S      +  
Sbjct: 295 DALDRLQRFVTSDFAQVNYTD-------AIEILKASGQKFENDVSWGIDLSSEHERYLAE 347

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHR 287
                   +   YP    A       D +     ++ A  I E+               R
Sbjct: 348 KHFKAPVVVK-NYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDAR 406

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            E+    K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  
Sbjct: 407 LEEMGLNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPF 457

Query: 346 PFS 348
           P +
Sbjct: 458 PRT 460


>gi|52080744|ref|YP_079535.1| asparaginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786115|ref|YP_091944.1| asparaginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319645298|ref|ZP_07999531.1| asparaginyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81385241|sp|Q65I63|SYN_BACLD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|52003955|gb|AAU23897.1| asparaginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52348617|gb|AAU41251.1| AsnS [Bacillus licheniformis ATCC 14580]
 gi|317393107|gb|EFV73901.1| asparaginyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 430

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 108/348 (31%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F+++D   L   +P         
Sbjct: 114 MDHRHLWLRSK--RQHATMKIRNEIIRATYEFFNKEGFVKVDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFATKYFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   + + ++   N +    +   +      N      S+ E I        Y    
Sbjct: 224 PEMAFVEFNENLEVQENYVSFIVQSVLENCKIELNTLGRDTSKLELIKAPFPRITY---- 279

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++ G     D  W D F       I  +   +    +  Y
Sbjct: 280 -------------DEAIQFLKEKGFD---DIEWGDDFGAPHETAIAESY--DKPVFITHY 321

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            D        +   ++       E++   E+ H  E      K+   E
Sbjct: 322 PTSLKPFYMQPAPDREDV----VLCADLIAPEGYGEIIGGSERIHDLELLEARLKEHGLE 377

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +    + +           SG  +G +R V  + G+ ++ E I  P  
Sbjct: 378 SDAY-QWYAELRKYGSVPHSGFGLGLERTVAWICGSPHVRETIPFPRL 424


>gi|188588043|ref|YP_001919588.1| asparaginyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|226695285|sp|B2UXS0|SYN_CLOBA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|188498324|gb|ACD51460.1| asparaginyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 464

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 102/358 (28%), Gaps = 45/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+   +  +  S       +  F    +
Sbjct: 123 AHLRPRSNAFSATFRVRSVAAFAIHKFFQEQGFVYTHTPIITGSDCEGAGEM--FRVTTL 180

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
                            D   K   L  S +    +  A     I+ F   +R       
Sbjct: 181 DPKAPELTKEGNIDYTKDFFGKETNLTVSGQL-NAECFALAFRNIYTFGPTFRAENSNTT 239

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M+    +++   +    +           F+      + 
Sbjct: 240 RHAAEFWMIEPEIAFADLQDDMELAEAMLKYVIKYVMDECPE----ELQFFNSFVDKGLL 295

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      + D                    ++      +D +W           +     
Sbjct: 296 ERLNHVVSSDFAKVTYTE-------AVEILEKCDKEFDYDVSWGIDLQTEHERYLTEEHF 348

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    I       E++   ++  R +  
Sbjct: 349 KKPL-FVTDYPKEIKAFYMRMNEDNKTVAATDLLVPGI------GEIIGGSQREERLDVL 401

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                ++  +       +L        + +G  +GF+RL+M +TG  NI +VI  P +
Sbjct: 402 EARMAELGLKKEDY-WWYLELRKYGETKHAGFGLGFERLIMYITGMTNIRDVIPFPRT 458


>gi|113475887|ref|YP_721948.1| asparaginyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110166935|gb|ABG51475.1| asparaginyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 463

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 109/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRA 61
            H R R          RN   +++ ++F E  F+ + +  +  S      E    T++  
Sbjct: 122 AHLRGRTNTYGAVFRVRNTCANAIHQFFQERGFLWVHTPIITASDCEGAGEMFTVTNLDL 181

Query: 62  FSTEL-------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
               L         QD   K  +L  S +    +++A     ++ F   +R        H
Sbjct: 182 KKIPLTEKQDIDFSQDFFGKSAFLTVSGQLEA-EIMATALSNVYTFGPTFRAENSNTSRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M      ++   +            +   F++    TV E 
Sbjct: 241 LAEFWMIEPEMAFCDLEGDMDLAEEFLKYIFKSV----LEGCPEDMEFFNKRIDKTVFET 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                        ++ ++          ++A  +  +   W           +   L   
Sbjct: 297 A-------DTIINNSFERITYTEAVSLLEKADKKFDYPVDWGLDLQSEHERYLCEELFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFT-KRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
              I+  YPA   A       D +       L     E+               R +++ 
Sbjct: 350 PV-IVTDYPAKIKAFYMRLNDDAKTVRAMDVLVPKVGEIIGGSQREERLDVLERRIDEQE 408

Query: 293 QEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             K+++          +L          +G  +GF+R+V  +TG  NI +VI  P 
Sbjct: 409 MNKEEL--------WWYLDLRRYGTVPHAGFGLGFERVVQFMTGMGNIRDVIPFPR 456


>gi|166363182|ref|YP_001655455.1| asparaginyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189083274|sp|B0JN99|SYN_MICAN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166085555|dbj|BAG00263.1| asparaginyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 454

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 105/351 (29%), Gaps = 38/351 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R       +  RN   +++  +F E  FI + +  +  +       +  F+    
Sbjct: 120 AHLRARTNTLGAVMRVRNACATAIHSFFQEKGFIWVHTPIITANDCEGAGEL--FTVTSL 177

Query: 67  -------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFT 118
                    +D   K  YL  S +    +++A     ++ F   +R        H  EF 
Sbjct: 178 DLKKPANFAEDFFGKRAYLTVSGQLQA-EVMAMALSNVYTFGPTFRAENSNTSRHLAEFW 236

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           M+E   A    E         ++   +            +   F+E    TV        
Sbjct: 237 MVEPEMAFCDLEGDQDLAEAFLKYIFKFV----LENCPEDLQFFNERIDKTVLSTAENIV 292

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
           N + G    +             ++A  +      W           +   L      I+
Sbjct: 293 NSEFGRITYSE-------AIELLEKADRQFEFPVEWGVDLQSEHERYLAEELFKKPV-IV 344

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKK 297
             YP    A       + +     ++ A  I E+               R +++      
Sbjct: 345 TNYPKTIKAFYMRLDDNNKTVSAMDILAPKIGEIIGGSQREERLDVLIQRMQEQGM---N 401

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +  + +D             +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 402 PDDLWWYLDLR----RYGSVPHAGFGLGFERLVQFMTGMTNIRDVIPFPRT 448


>gi|126459746|ref|YP_001056024.1| asparaginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126249467|gb|ABO08558.1| asparaginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 431

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 58/347 (16%), Positives = 117/347 (33%), Gaps = 39/347 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    + +  L  R+ +  ++ +YF    F E+       +   E     F 
Sbjct: 116 LDVRHLWLRSR--KMQAILKIRHTVFGAIHDYFRRRGFYEVHPPMFITAAV-EGGATLFK 172

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            E     +  + +YL  S +F  + L+ +  EK++  A ++R        H  EF   E 
Sbjct: 173 VE-----YFDRTVYLTQSSQFYLEALIYS-LEKVYTVAPSFRAEPSRTRRHLTEFWHAEM 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    +   K    +I    E                    E     +   R      
Sbjct: 227 EIAWAHMDDAAKVGEEVIGHVVERVLD----------------ERQDELKLLGRKV---- 266

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L+    P   L Y +A +   +     +W D         +   L  +   IL  +P
Sbjct: 267 -EALERAKPPFHWLSYDEAIEVLRKKGFALSWGDDIGADEERAL--TLEFDKPIILHGFP 323

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
               A    +  +P+  +    +   + L     E++   E+ +  ++ +++  +     
Sbjct: 324 EKLKAFY--HRNNPQRPEVTLSFD--VLLPEGYGEVIGGGERIYDAKELVEKIIRFGLNP 379

Query: 303 YPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ++          +G  +G DRLVM + GA++I +V+  P  
Sbjct: 380 EDY-QWYIDLRRYGSVPHAGFGLGVDRLVMWIAGADHIRDVVPFPRD 425


>gi|170589884|ref|XP_001899703.1| Aspartyl-tRNA synthetase [Brugia malayi]
 gi|158592829|gb|EDP31425.1| Aspartyl-tRNA synthetase, putative [Brugia malayi]
          Length = 535

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 110/350 (31%), Gaps = 45/350 (12%)

Query: 13  DFHYRRRPFLLKRNMIQSSL-----------REYFVENQFIEIDSMSLQYSPGNETHIRA 61
           D     R  L  R     ++           R    +  F+EI +  +  +  +E     
Sbjct: 211 DTRLDNR-VLDLRTQTSHAIFSIQDGVCELFRNTLKKRGFMEIHTPKIISAA-SEGGANV 268

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
           F        + ++  YL  SP+   +  +AA  +K+F     +R  +     H  EF  L
Sbjct: 269 FEV-----SYFKRSAYLAQSPQLYKQMAIAADFDKVFTIGAVFRAEDSNTHRHLTEFVGL 323

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   A             ++     V        Q        E E +        +  +
Sbjct: 324 DIEMAF------KFHYHEVLETIGAVLIDIFKDLQ---AKFKHEIEIVDKQYPCEPFEFV 374

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           +    L  PD           ++ G+ +  +D  S    + L   ++     +   ILDR
Sbjct: 375 EPALILRYPD------AVKLLRENGVEIGDEDDLSTPVEKFLGRLVKEKYRTD-FYILDR 427

Query: 241 YPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YP             DP+++  ++++    E+ +    + D      R      +  +I 
Sbjct: 428 YPLAVRPFYTMPDANDPKYSNSYDMFMRGEEILSGAQRIHDASLLTER-----AKHHQID 482

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E       ++       P  +G  +G +R+ ML  G  N+      P  
Sbjct: 483 LEKI---RAYIDSFKFGCPPHAGGGIGLERVTMLFLGLGNVRLASLFPRD 529


>gi|322389677|ref|ZP_08063225.1| asparagine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321143676|gb|EFX39106.1| asparagine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 448

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DE 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 294 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 340

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 AAIKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 396 RTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 442


>gi|317057283|ref|YP_004105750.1| asparaginyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315449552|gb|ADU23116.1| asparaginyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 457

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 54/369 (14%), Positives = 111/369 (30%), Gaps = 52/369 (14%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--- 52
           +  +P         H R R       +  R+++  ++ +Y+ E  F+ +++  +  S   
Sbjct: 115 LRTMP---------HLRGRTNTFNAVMRIRSVLAQAIHQYYQERNFVYVNTPLITGSDCE 165

Query: 53  PGNETHIRA---FSTELIIQDHIRK-PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHA 103
              E        +STE   +D       +     L  S +   +    A   KI+ F  +
Sbjct: 166 GAGEMFRVTTIGYSTEYKTEDDYDAADFFGRRAGLSVSGQLEGEMAATAM-GKIYTFGPS 224

Query: 104 WRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           +R        H  EF  +E   A    E +++   ++++       +K           F
Sbjct: 225 FRAENSNTPKHLAEFWHVEPEIAFAELEDVIEVAEDMVKHVIGTVLEKCPDEIAFFDAHF 284

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
            +     + E  +               +          +++G +  +   W        
Sbjct: 285 EKGLKARLEELISHEFG-----------RVTYTEAIELLKKSGEKFVYPVDWGCDLQTEH 333

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +           +  YP    +       D +     +L    +       E     
Sbjct: 334 ERYLSEK-VFKKAVFVTDYPKDIKSFYMKQNPDGKTVAAVDLLVPGVGEIIGGSEREADY 392

Query: 283 EQRHRFEKEMQEKKKIYNETYPID--EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           +         +    +      +D   D+L           G  +GF+RL+M VTG  NI
Sbjct: 393 D---------KLIAAMKERNMNLDLYSDYLDLRKFGTVPHGGFGLGFERLIMYVTGVQNI 443

Query: 340 NEVIWTPFS 348
            +VI  P +
Sbjct: 444 RDVIMFPRT 452


>gi|115396750|ref|XP_001214014.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114193583|gb|EAU35283.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 909

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/331 (18%), Positives = 118/331 (35%), Gaps = 27/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ + +  R    E  FIEI +  LQ S   E+    FS      ++  +  +
Sbjct: 267 SQSIFRIQSAVGNLFRTALDEQGFIEIHTPKLQGSA-TESGASVFSV-----NYFGRDAF 320

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +AA   +++     +R        H  E+T L+   A E +   M D 
Sbjct: 321 LAQSPQLAKQMAIAADFGRVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEMLDV 380

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           +  +          E +   E        D    L++    D   
Sbjct: 381 LDAVIKNILQGVYGRYRREVEIIKQQFPSEDVVWLEKTPIIRFADGIKMLNDSGWRDEDG 440

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPAD 255
             L   +  +    +    ++        ++   G +   I+D++P       A   P D
Sbjct: 441 NLLPEDE-DLHTRDEIRLGEL--------VKEKYGTD-YYIIDKFPVGARPFYAMPDPDD 490

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            RFT  F+++    E+ +    + DP     R  +E   +  I  ++    E+++     
Sbjct: 491 SRFTNSFDIFIRGQEIVSGGQRIHDP-----RMLEENMRRNGINPDSM---EEYMEGFEW 542

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +RLVML+    NI      
Sbjct: 543 GAPPHAGAGVGLERLVMLLLKLGNIRLASLF 573


>gi|157369974|ref|YP_001477963.1| asparaginyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980090|sp|A8GCJ5|SYN_SERP5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|157321738|gb|ABV40835.1| asparaginyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 466

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 108/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  ++ EN F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFYHENGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRTDKGAVDFSQDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E + +    +++   +       + +  +   F+E       + 
Sbjct: 244 LAEFWMIEPEVAFADLEDIAELAEKMLKYVFQAV----LNERMDDMQFFAERVDKDAIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D          +G    +  +W    S      +       
Sbjct: 300 LQRFVTSDFAQV-------DYTEAVEILIASGQTFENPVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   Q
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGAQREERLDVLDQ 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + +       D  +   L        +G  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLEAMGL--NKEDYWWYRDLRRYGTVPHAGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|325695942|gb|EGD37833.1| asparagine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 448

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 122/356 (34%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPAAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  ++  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMNELGMDTSEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|22126636|ref|NP_670059.1| asparaginyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45441008|ref|NP_992547.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51595776|ref|YP_069967.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108806704|ref|YP_650620.1| asparaginyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108812726|ref|YP_648493.1| asparaginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145599555|ref|YP_001163631.1| asparaginyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149366669|ref|ZP_01888703.1| asparaginyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153950923|ref|YP_001401523.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162419705|ref|YP_001606453.1| asparaginyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165924584|ref|ZP_02220416.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938931|ref|ZP_02227484.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166211575|ref|ZP_02237610.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400005|ref|ZP_02305523.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419723|ref|ZP_02311476.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424283|ref|ZP_02316036.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170024873|ref|YP_001721378.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186894855|ref|YP_001871967.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218928560|ref|YP_002346435.1| asparaginyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229841386|ref|ZP_04461545.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843491|ref|ZP_04463637.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903129|ref|ZP_04518242.1| asparaginyl tRNA synthetase [Yersinia pestis Nepal516]
 gi|270486924|ref|ZP_06203998.1| asparagine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503399|ref|YP_003567461.1| asparaginyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|20139880|sp|P58697|SYN_YERPE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|59798513|sp|Q66CG7|SYN_YERPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123072925|sp|Q1CA47|SYN_YERPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123073284|sp|Q1CGI7|SYN_YERPN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166232744|sp|A4TMZ6|SYN_YERPP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166980091|sp|A7FJU5|SYN_YERP3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21959647|gb|AAM86310.1|AE013878_7 asparagine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45435867|gb|AAS61424.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51589058|emb|CAH20676.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108776374|gb|ABG18893.1| asparaginyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108778617|gb|ABG12675.1| asparaginyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115347171|emb|CAL20064.1| asparaginyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145211251|gb|ABP40658.1| asparaginyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149291043|gb|EDM41118.1| asparaginyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152962418|gb|ABS49879.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162352520|gb|ABX86468.1| asparaginyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165913078|gb|EDR31702.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165923644|gb|EDR40776.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|166207346|gb|EDR51826.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962464|gb|EDR58485.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050713|gb|EDR62121.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057132|gb|EDR66895.1| asparaginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169751407|gb|ACA68925.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186697881|gb|ACC88510.1| asparaginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229678899|gb|EEO75002.1| asparaginyl tRNA synthetase [Yersinia pestis Nepal516]
 gi|229689838|gb|EEO81899.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697752|gb|EEO87799.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|262361441|gb|ACY58162.1| asparaginyl-tRNA synthetase [Yersinia pestis D106004]
 gi|270335428|gb|EFA46205.1| asparagine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294353858|gb|ADE64199.1| asparaginyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320015724|gb|ADV99295.1| asparaginyl tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 466

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 114/363 (31%), Gaps = 55/363 (15%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---------------- 52
            H R R  L       R+ +  ++  +F EN +  + +  +  S                
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 53  ---PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              P  +T    FS     +D   K  +L  S + + +    A   K++ F   +R    
Sbjct: 185 ENLPRTDTGAVDFS-----EDFFGKEAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENS 238

Query: 110 GC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A  S + +      +++   +       + +  +   F+E    
Sbjct: 239 NTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAV----LNERADDMKFFAERVDK 294

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +   R+   D           D          +G +  +D +W    S      +  
Sbjct: 295 DAVDRLQRFVTSDFAQV-------DYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAE 347

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                   +   YP    A       D +             L     E++   ++  R 
Sbjct: 348 KHFKAPVVVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERL 400

Query: 289 E-KEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +  + +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  
Sbjct: 401 DVLDARLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPF 457

Query: 346 PFS 348
           P +
Sbjct: 458 PRT 460


>gi|238757642|ref|ZP_04618826.1| Asparaginyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704147|gb|EEP96680.1| Asparaginyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 466

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 116/363 (31%), Gaps = 55/363 (15%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---------------- 52
            H R R  L       R+ +  ++  +F EN +  + +  +  S                
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 53  ---PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              P  +T    FS     +D   K  +L  S + + +   +A   K++ F   +R    
Sbjct: 185 ENLPRTDTGAVDFS-----EDFFGKEAFLTVSGQLNGETYASA-LSKVYTFGPTFRAENS 238

Query: 110 GC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A  S + +      +++   +       + +  +   F+E    
Sbjct: 239 NTSRHLAEFWMVEPEVAFASLDDVAALAEKMLKYVFQAV----LNERADDMKFFAERVDK 294

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +   R+   D           D        Q +G +  +D +W    S      +  
Sbjct: 295 DAVDRLQRFVTSDFAQV-------DYTDAIEILQASGQKFENDVSWGIDLSSEHERYLAE 347

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                   +   YP    A       D +             L     E++   ++  R 
Sbjct: 348 KHFKAPVVVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERL 400

Query: 289 E-KEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +  + +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  
Sbjct: 401 DVLDARLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPF 457

Query: 346 PFS 348
           P +
Sbjct: 458 PRT 460


>gi|222152793|ref|YP_002561970.1| asparaginyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222113606|emb|CAR41467.1| asparaginyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 448

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/348 (16%), Positives = 115/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAIMQIRNAIIYATYEFFDQNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  ++++ +      ++   +    +      +        +         +  + D 
Sbjct: 236 EYSFLNHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDALKR--YIAEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             +L    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AISLLQEHEADEDTDYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   +E    +   +  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDDYEALSAKMDALGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|284007569|emb|CBA73110.1| asparaginyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 466

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/357 (16%), Positives = 109/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       RN +  ++  +F E  ++ + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAIARVRNTLAQAIHRFFHEEGYLWVSTPIITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 QNIPRTEKGDINFDKDFFGREAFLTVSGQLNGEAYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +      +++   +   Q+    ++ +   F+E     V   
Sbjct: 244 LAEFWMVEPEVAFADLNDIASLAEKMLKYVFKSVLQE----RHDDLTFFAERIDKEVISR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++   D         Q D        +Q+G    +   W    S      +       
Sbjct: 300 LEKFIVSDFA-------QIDYTDAIKVLEQSGKTFENPVAWGIDLSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L  +  E++   ++  R  K   
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDNKTVAAM------DVLAPSIGEIIGGSQREERLHKLDA 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++       D  +   L        +G  +GF+RLV  VTG  NI E I  P +
Sbjct: 406 RMDEMGLNQQ--DYSWYRDLRRYGTVPHAGFGLGFERLVAYVTGVQNIRETIAFPRT 460


>gi|251778075|ref|ZP_04820995.1| asparagine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082390|gb|EES48280.1| asparagine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 464

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 102/358 (28%), Gaps = 45/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+   +  +  S       +  F    +
Sbjct: 123 AHLRPRSNAFSATFRVRSVAAFAIHKFFQEQGFVYTHTPIITGSDCEGAGEM--FRVTTL 180

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
                            D   K   L  S +    +  A     I+ F   +R       
Sbjct: 181 DPKAPELTKEGDIDYTKDFFGKETNLTVSGQL-NAECFALAFRNIYTFGPTFRAENSNTT 239

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M+    +++   +    +           F+      + 
Sbjct: 240 RHAAEFWMIEPEIAFADLQDDMELAEAMLKYVIKYVMDECPE----ELQFFNSFVDKGLL 295

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      + D                    ++      +D +W           +     
Sbjct: 296 ERLNHVVSSDFAKVTYTE-------AVEILEKCDKEFDYDVSWGIDLQTEHERYLTEEHF 348

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    I       E++   ++  R +  
Sbjct: 349 KKPL-FVTDYPKEIKAFYMRMNEDNKTVAATDLLVPGI------GEIIGGSQREERLDVL 401

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                ++  +       +L        + +G  +GF+RL+M +TG  NI +VI  P +
Sbjct: 402 EARMAELGLKKEDY-WWYLELRKYGETKHAGFGLGFERLIMYITGMTNIRDVIPFPRT 458


>gi|148264997|ref|YP_001231703.1| asparaginyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189083272|sp|A5G5R2|SYN_GEOUR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|146398497|gb|ABQ27130.1| asparaginyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 461

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 105/355 (29%), Gaps = 40/355 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  +F E  F+ + +  +  +       +   +T  +
Sbjct: 121 AHLRPRTNTFGAVFRVRSSLAQAVHRFFAERGFLYVHTPIITANDCEGAGELFRVTTLDM 180

Query: 68  IQDHI-------RKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
            +  +           +     L  S +   +    A    I+ F   +R        H 
Sbjct: 181 ARPPLAAGEVDYSGDFFAQATGLTVSGQLEGELFAQA-FSDIYTFGPTFRAENSNTARHA 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A            + ++                +   F+E     + E  
Sbjct: 240 AEFWMIEPELAFADLMADAALAEDFLKFLCRHV----LDNCGEDMAFFNEQIDKGLLERV 295

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
              A+             +        ++A +  A    W           I   +    
Sbjct: 296 RAVADSSFAVM-------EYTEAITHLKKAKVPFAFPVEWGLDLQSEHERYITEKVVGGP 348

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             ++  YP    A       D +     +L    +       E++   ++  R +  ++ 
Sbjct: 349 VFLV-NYPKDIKAFYMRQNDDGKTVAAMDLLVPKV------GEIIGGSQREERLDLLLER 401

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ++      +   +L          +G  +GF+RL+M +TG  NI +VI  P +
Sbjct: 402 MAQMGINEDGL-WWYLDSRRWGSCPHAGFGLGFERLLMYLTGMENIRDVIPFPRT 455


>gi|301102291|ref|XP_002900233.1| asparaginyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262102385|gb|EEY60437.1| asparaginyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 495

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/376 (15%), Positives = 119/376 (31%), Gaps = 49/376 (13%)

Query: 3   QIPSQPWWNRD----FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +           H R R       +  RN +  +  E+F +  F+ I +  +  S 
Sbjct: 131 PMSKKRHTLEHLRAHAHLRPRSNIHGAAMRVRNAMAFATHEFFNQRGFLYIHTPIITESD 190

Query: 53  PGNETHIRAFSTELIIQ-----------------DHIRKPLYLQTSPEFSCKKLLAAGEE 95
                 + + ST L                    D   +P YL  S + + +    A   
Sbjct: 191 CEGAGEMFSVSTLLSQHPDGKLPLTKENKVDYTKDFFDRPSYLSVSGQLNVETHCCA-LS 249

Query: 96  KIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
            ++ F   +R        H  EF M+E   A    +  +    + ++   + A       
Sbjct: 250 DVYTFGPTFRAENSNTSRHLAEFWMIEPEIAFADLKDDIDLAEDYLKFCVQYA----LDH 305

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
              +   F++     + E  A  A ++      +       LL  +  + G + +    W
Sbjct: 306 CTEDLEFFNKNVEKGLLERLA--ATVESPFVRISYTDAVELLLKPEHLKKG-KFSVKPVW 362

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
              F       +   +      ++  YP    +       D +     ++   N+     
Sbjct: 363 GTDFGSEHERYLTETVYKKPV-VIYDYPKEFKSFYMRLNDDGKTVAAADVLVPNV----- 416

Query: 275 CDELLDPIEQRHRFE-KEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVM 331
             E++    +  R +  E + ++       P D  +   L        +G  +GF+RL+ 
Sbjct: 417 -GEIIGGSAREERLDVLEARIRESG---ANPEDYKWYVELRKYGTVPHAGFGLGFERLIR 472

Query: 332 LVTGANNINEVIWTPF 347
            VTG  NI +VI  P 
Sbjct: 473 YVTGIENIRDVIPFPR 488


>gi|332362117|gb|EGJ39919.1| asparagine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 448

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 121/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YP    +      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPEAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  ++  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMNELGMDTSEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|147921302|ref|YP_684884.1| aspartyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110620280|emb|CAJ35558.1| aspartyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 434

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 112/365 (30%), Gaps = 57/365 (15%)

Query: 3   QIPSQPWW----NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
            +P  P        D     R               R  +  ++R++   N  +EI +  
Sbjct: 104 PLPLDPTGKVPAELDTRLDARFMDIRSPEVTAIFTIRAHMIKAVRDFLSANGCLEIATPK 163

Query: 49  LQYSP-GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +  +     T +   S       +  +  +L  SP+   + ++AAG ++++     +R  
Sbjct: 164 IVATATEGGTALFPIS-------YFDREAFLNQSPQLYKQMMMAAGMDRVYEIGPIFRAE 216

Query: 108 EQGCL-HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  E T ++   +  ++E  M    N I        +   S             
Sbjct: 217 EHATRKHLNEATSIDVELSFATHEDAMILLENTIAYVYNYVKEHCASQ------------ 264

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                    +  NIDL        +         A+ +           D         I
Sbjct: 265 --------LKVLNIDLQVPKTPFRRVPYTEAVEIAKTS--PECAHLELGDDLDTAAEHVI 314

Query: 227 EPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
              +G      +  +P    +  +  Y   P   K F+L    +EL +         +  
Sbjct: 315 GETIGE--HYFIVDWPTNIRAFYSQAYDDRPEVCKAFDLMHPRMELSSGAQREHRVDKLI 372

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
              E      + +  +++   + +L      MP  +G  +G +RL+  +   NN+ E + 
Sbjct: 373 KNLED-----RDLNPDSF---KFYLDSFRYGMPPHAGWGLGAERLLQTMLNLNNVREAVL 424

Query: 345 TPFSQ 349
            P  +
Sbjct: 425 FPRDR 429


>gi|46908129|ref|YP_014518.1| asparaginyl-tRNA synthetase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47094410|ref|ZP_00232099.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|226224500|ref|YP_002758607.1| asparaginyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254825609|ref|ZP_05230610.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852800|ref|ZP_05242148.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931933|ref|ZP_05265292.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254992078|ref|ZP_05274268.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|255521649|ref|ZP_05388886.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300763794|ref|ZP_07073791.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|59798547|sp|Q71YB9|SYN_LISMF RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46881399|gb|AAT04695.1| asparaginyl-tRNA synthetase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47017218|gb|EAL08062.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|225876962|emb|CAS05671.1| Putative asparaginyl-tRNA synthetase [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258606127|gb|EEW18735.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583485|gb|EFF95517.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293594852|gb|EFG02613.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300515530|gb|EFK42580.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328466245|gb|EGF37402.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 1816]
 gi|328473611|gb|EGF44448.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332312337|gb|EGJ25432.1| Asparaginyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 430

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 103/355 (29%), Gaps = 54/355 (15%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F++ID   L   +P         
Sbjct: 114 MDHRHLWLRSN--RQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFDEDAFLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPFSEPEYITVAEAF 174
              A    E  ++   N +    +                 +      +    IT  EA 
Sbjct: 224 PEMAFYKLEDSLQVQENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAI 283

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R                          + G     D  W D F       I  +     
Sbjct: 284 ER------------------------LHELGFD---DIVWGDDFGAPHETAIADS--FEK 314

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  YP            +        +   ++       E++   E+ H  E     
Sbjct: 315 PVFITHYPKAIKPFYMPEDPENDQV----VLCADMIAPEGYGEIIGGSERIHDLETLQAR 370

Query: 295 KKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +    +       +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 371 MEDFDLDQEAY-SWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRL 424


>gi|22328958|ref|NP_194417.2| aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase,
           putative [Arabidopsis thaliana]
 gi|24030349|gb|AAN41339.1| putative aspartate-tRNA ligase [Arabidopsis thaliana]
 gi|332659863|gb|AEE85263.1| aspartyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 532

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 102/335 (30%), Gaps = 37/335 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  +Q + REY     F+EI +  L    S G     R         D+  +P 
Sbjct: 224 QAIFRIQCQVQIAFREYLQSKGFLEIHTPKLIAGSSEGGSAVFR--------LDYKGQPA 275

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  +     ++F     +R  +     H  EF  L+              
Sbjct: 276 CLAQSPQLHKQMAICGDMRRVFEVGPVFRAEDSFTHRHLCEFVGLDVE-----------M 324

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            + +          ++F F           E     E+  +         L    +    
Sbjct: 325 EIRMHYSEIMDLVGELFPFIFTKIEERCPKE----LESVRKQYPFQSLKFLPQTLRLTFA 380

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
                 ++AG  V      +    R L + +          +L RYP+         Y  
Sbjct: 381 EGIQMLKEAGEEVDPLGDLNTESERKLGQLVLEKYKTE-FYMLHRYPSAVRPFYTMPYEN 439

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           D  ++  F+++    E+ +    + DP     R       ++   +        ++    
Sbjct: 440 DSNYSNSFDVFIRGEEIMSGAQRIHDPELLEKR------ARECGID--VKTISTYIDAFR 491

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P   G  +G +R+VML+   NNI +    P  
Sbjct: 492 YGAPPHGGFGVGLERVVMLLCALNNIRKTSLFPRD 526


>gi|320353431|ref|YP_004194770.1| asparaginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320121933|gb|ADW17479.1| asparaginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 459

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/357 (18%), Positives = 111/357 (31%), Gaps = 47/357 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRA 61
            H R R          R+ +  ++  +F E+ F+++ +  +  S      E    T +  
Sbjct: 122 AHLRPRTNALGAVARVRSALSFAIHRFFHEHGFLQVHTPVITTSDCEGAGEMFTVTALEP 181

Query: 62  FSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQP 115
               L   D      +     L  S +   +    +   +++ F   +R        H  
Sbjct: 182 GQ--LQGPDPFNNDFFGRRAGLTVSGQLQAEIFALSH-GRVYTFGPTFRAEHSNTSRHLA 238

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF MLE   A            ++I+    VA  +               E + + +   
Sbjct: 239 EFWMLEPEMAFCDLAGNRDVAESLIKFLVCVALDECG-------------EDLALFDQHV 285

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQA----QQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ID  T +   D+P  HL Y  A    Q+AG +      W           +   + 
Sbjct: 286 AKGLIDKLTQVR--DRPFVHLPYTDAVTELQRAGRQFEFPVQWGIDLQAEHERFLCEEVA 343

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                ++  YPA           D R     ++    I       EL+   ++  R+E  
Sbjct: 344 QAPV-VVTNYPADIKPFYMRLDDDGRTVAAMDILVAGI------GELIGGSQREERYEVL 396

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                    +                  SG  +GF+RLV  VTG  NI +VI  P +
Sbjct: 397 AARMAAAGLDLAQYGWYLDLRRYGSVPHSGFGLGFERLVQFVTGMQNIRDVIPFPRT 453


>gi|187933881|ref|YP_001884396.1| asparaginyl-tRNA synthetase [Clostridium botulinum B str. Eklund
           17B]
 gi|226695286|sp|B2TI01|SYN_CLOBB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|187722034|gb|ACD23255.1| asparagine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 464

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 102/358 (28%), Gaps = 45/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+   +  +  S       +  F    +
Sbjct: 123 AHLRPRSNAFSATFRVRSVAAFAIHKFFQEQGFVYTHTPIITGSDCEGAGEM--FRVTTL 180

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
                            D   K   L  S +    +  A     I+ F   +R       
Sbjct: 181 DPKAPELTKEGDIDYTKDFFGKETNLTVSGQL-NAECFALAFRNIYTFGPTFRAENSNTT 239

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M+    +++   +    +           F+      + 
Sbjct: 240 RHAAEFWMIEPEIAFADLQDDMELAEAMLKYVIKYVMDECPE----ELQFFNSFVDKGLL 295

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      + D                    ++      +D +W           +     
Sbjct: 296 ERLNHVVSSDFAKVTYTE-------AVEILEKCDKEFDYDVSWGIDLQTEHERYLTEEHF 348

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    I       E++   ++  R +  
Sbjct: 349 KKPL-FVTDYPKEIKAFYMRMNEDNKTVAATDLLVPGI------GEIIGGSQREERLDVL 401

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                ++  +       +L        + +G  +GF+RL+M +TG  NI +VI  P +
Sbjct: 402 EARMAELGLKKEDY-WWYLELRKYGETKHAGFGLGFERLIMYITGMTNIRDVIPFPRT 458


>gi|195426483|ref|XP_002061362.1| GK20765 [Drosophila willistoni]
 gi|194157447|gb|EDW72348.1| GK20765 [Drosophila willistoni]
          Length = 534

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/355 (16%), Positives = 114/355 (32%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   E  F EI +  +  +  +E    
Sbjct: 208 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAA-SEGGAN 266

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K+F     +R  +     H  EF  
Sbjct: 267 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 321

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                +Y    EA  +   
Sbjct: 322 LDLEMAFKYHYHEVLHT---------------IGNTFTAIFKGLRDQYSREIEAVGQQYK 366

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+ P            + AG+    ++  S    ++L   ++     +   ILD
Sbjct: 367 VEPFKFLEPPLILQFAEGVAMLRGAGVETGDEEDLSTPNEKLLGRLVKAKYDTD-FYILD 425

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P +P ++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 426 KFPLAIRPFYTMPDPNNPIYSNSYDMFMRGEEILSGAQRIHDP--------EYLIERAKH 477

Query: 299 YNETYPID----EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 478 ----HGIDTTKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPRD 528


>gi|196006055|ref|XP_002112894.1| hypothetical protein TRIADDRAFT_56497 [Trichoplax adhaerens]
 gi|190584935|gb|EDV25004.1| hypothetical protein TRIADDRAFT_56497 [Trichoplax adhaerens]
          Length = 535

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 115/351 (32%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R++     F+EI +  +  +  +E    
Sbjct: 209 NQDTRLDNRIIDLRTPTNQALFKLEAALCKLFRDHLTSKGFVEIHTPKIISAA-SEGGAN 267

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F        + +   YL  SP+   +  +A   +++F     +R  +     H  EF  
Sbjct: 268 VFEV-----SYFKGKAYLAQSPQLYKQMAIAGDFDRVFTVGGVFRAEDSNTHRHLCEFVG 322

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A                   E   +   S      + F+E   + + +  A    
Sbjct: 323 LDLEMAFY----------EHYHEVLETIGELFISIFKGLRDNFAEEIAVVMKQFPAE--- 369

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                 ++   + +        ++ G+ +  +D  S    + L + ++   G +   +LD
Sbjct: 370 --PFQFIEPTLRLEFPEAVSMLRENGVEIGDEDDLSTPNEKFLGKLVKAKYGTD-FYMLD 426

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P+ +  ++++    E+ +    + DP     R      +   +
Sbjct: 427 KYPLAVRPFYTMPDPNNPKQSNSYDMFMRGEEILSGAQRIHDPEFLTER-----AKLHSV 481

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++          +G  +G +R++ML  G +NI +    P  
Sbjct: 482 DLEKI---KAYIDSFKFGCFPHAGGGIGMERVLMLYLGLDNIRKTSMFPRD 529


>gi|118444104|ref|YP_877316.1| asparaginyl-tRNA synthetase [Clostridium novyi NT]
 gi|166231662|sp|A0PY64|SYN_CLONN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|118134560|gb|ABK61604.1| asparaginyl-tRNA synthetase [Clostridium novyi NT]
          Length = 463

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 103/356 (28%), Gaps = 41/356 (11%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F +  F+ + +  +  S       +   +T   
Sbjct: 122 AHLRPRSNAFSAVFRVRSLAAYAIHKFFQDQGFVYVHTPIITGSDCEGAGEMFRVTTLDM 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K   L  S +   +    A    ++ F   +R        H
Sbjct: 182 ENPPKDEKGNVDYKEDFFGKQANLTVSGQLEAEIYALA-FRNVYTFGPTFRAENSNTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M     +++                    F++     + E 
Sbjct: 241 ASEFWMIEPEMAFAELKDYMDVAEQMVKYIINYV----RENAPEEMEFFNKFIDKGLLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D                    Q++G    +   W           +   +   
Sbjct: 297 LDNVVNSDFARISYTE-------AVEILQKSGAEFEYPVEWGIDLQTEHERYLTEQIYKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    I       E++   ++  R +    
Sbjct: 350 PV-FVTDYPKDIKAFYMRMNDDNKTVAAADLLVPGI------GEIIGGSQREERLDILEA 402

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++  E       +L        + +G  +GF+R++M +TG  NI +VI  P +
Sbjct: 403 RMAELGLEKEDY-WWYLELRKYGETKHAGYGLGFERMIMYLTGMGNIRDVIPFPRT 457


>gi|22300015|ref|NP_683262.1| asparaginyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|38258369|sp|Q8DG51|SYN_THEEB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|22296200|dbj|BAC10024.1| asparaginyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 462

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 102/357 (28%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R       +  RN   +++ ++F E  F+ + +  +  S       +        
Sbjct: 121 AHLRPRTNTLGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGELFTVTTLDL 180

Query: 60  -RAFSTE----LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
            +   T        QD   +  YL  S +    +++A     ++ F   +R        H
Sbjct: 181 TQPPKTPEGKIDFSQDFFGRRAYLTVSGQLEA-EIMATAFTNVYTFGPTFRAENSNTSRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M+     ++                           T  + 
Sbjct: 240 LAEFWMVEPEMAFCDLRGDMELAEAFLQFVFRYVLDHCPEDMAFFQERIDHSVMATAEQM 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                                       +++G        W           +       
Sbjct: 300 -----------ATQPFAHLSYSEAIQVLEKSGRAFEFPVAWGLDLQSEHERYLAEEYC-Q 347

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              I+  YPA   A       D +     ++      L     E++   ++  RF+  + 
Sbjct: 348 RPVIVYDYPAAIKAFYMRLNDDGKTVAAMDI------LAPKIGEIIGGSQREERFDVLQE 401

Query: 293 QEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +  +        +L          +G  +GF+RLV  +TG +NI +VI  P +
Sbjct: 402 RIVTQGLDPAPY--WWYLDLRRYGSVPHAGFGLGFERLVQFMTGMDNIRDVIPFPRT 456


>gi|291518461|emb|CBK73682.1| asparaginyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 466

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 55/372 (14%), Positives = 106/372 (28%), Gaps = 52/372 (13%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R          R++   ++ ++F E  F+ + +  +  S    
Sbjct: 113 PKRHTMEYLRTQTHLRPRTNTFQAVFRVRSLCAYAIHKFFQERDFVYVHTPLITGSDCEG 172

Query: 56  ETHIRAFSTELIIQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCF 100
              +  F    +  +             +  +     L  S + + +    A  + I+ F
Sbjct: 173 AGEM--FQVTTMDLNNIPKTDDGKVDFSQDFFGHATNLTVSGQLNGETYAQA-FKNIYTF 229

Query: 101 AHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   +    E  M    ++++                  
Sbjct: 230 GPTFRAENSNTTRHAAEFWMIEPEISFADLEDDMILAEDMLKYVINYV----LEHAPEEM 285

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
             F+      + E     AN D G                + ++      +  +W     
Sbjct: 286 QFFNSFVDKGLLERLQHVANSDFGRITYTD-------AIAELEKHNDEFDYKVSWGCDLQ 338

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDEL 278
                 +   +       +  YP    A       D +     +     I E+       
Sbjct: 339 TEHERYLTEKIFKKPV-FVTDYPKEIKAFYMKLNEDGKTVAAMDCLVPGIGEIIGGSQRE 397

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGA 336
            D      R ++          E    D  F   L      + +G  +GF+R VM +TG 
Sbjct: 398 DDYDVLLKRMQE------CGLKEE---DYQFYLDLRKYGSSRHAGFGLGFERCVMYLTGM 448

Query: 337 NNINEVIWTPFS 348
            NI +VI  P +
Sbjct: 449 GNIRDVIPFPRT 460


>gi|225028942|ref|ZP_03718134.1| hypothetical protein EUBHAL_03232 [Eubacterium hallii DSM 3353]
 gi|224953717|gb|EEG34926.1| hypothetical protein EUBHAL_03232 [Eubacterium hallii DSM 3353]
          Length = 460

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/355 (15%), Positives = 101/355 (28%), Gaps = 41/355 (11%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL-- 66
           H R R          R+M   ++ ++F E  F+ + +  +  S       +   +T    
Sbjct: 120 HLRPRTNTFQAVFRIRSMAAYAIHQFFQERGFVYVHTPLITASDCEGAGEMFQVTTLDLN 179

Query: 67  -----------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
                        QD   KP  L  S + + +    A     + F   +R        H 
Sbjct: 180 NIPKDKEGNVDFAQDFFNKPTNLTVSGQLNAETFAQA-FRNTYTFGPTFRAENSNTARHA 238

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    +  M+    +++                  +  ++     + +  
Sbjct: 239 AEFWMIEPEMAFADLKDDMEVAEAMLKYVISYV----MENAPEEMDFLNQFVDKGLKDRL 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               N + G                  ++   +  +  +W           +        
Sbjct: 295 NHVLNSEFGHVTYTE-------AVEILEKHNDKFEYKVSWGTDLQTEHERYLTEE-VFKR 346

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP    A       D +     +     I E+        D    + R E+   
Sbjct: 347 PVFVTDYPKEIKAFYMKLNPDGKTVAAMDCLVPGIGEIIGGSQREDDYEMLKKRMEE--- 403

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +  E Y    D           SG  +GF+R VM +TG +NI + I  P +
Sbjct: 404 --VGLDEEKYQFYLDLRK--YGSTHHSGFGLGFERCVMYLTGISNIRDAIPFPRT 454


>gi|46110188|ref|XP_382152.1| hypothetical protein FG01976.1 [Gibberella zeae PH-1]
          Length = 1033

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/335 (14%), Positives = 107/335 (31%), Gaps = 36/335 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H   +     R M+    R    E+ F+EI++  LQ +   E+    F       ++  
Sbjct: 393 RHPSNQALFRVRAMVTRVFRNTLEEHGFVEINTPKLQPAA-TESGAAVFPV-----NYFG 446

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA-HESYEQ 131
           +  +L  SP+ + ++ ++A   ++F     +R        H  E+T L+   A    Y +
Sbjct: 447 RRAFLAQSPQLAKQEAISADFGRVFEVGPVFRAENSNTHRHLTEYTGLDLEMAIDTDYHE 506

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      ++                   P  E +++                TL  P  
Sbjct: 507 VISFIDIFLKEVFRTVYASRELEVIRKRWPSKEFKWL--------------EETLVLPFS 552

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +L    ++  +          +   +  +       ++      R           
Sbjct: 553 EGLQMLRDDGREVEVEDLSTPDEMRLGELVRQKYDTDYYVLDKFPANAR-----PFYTAK 607

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P DP +T+ F+++    E+C+    + +  E R          +    E     ED+L 
Sbjct: 608 DPEDPTWTRSFDIFIRGQEICSGGQRIHNVDELR------ANMAEAGMAEDGM--EDYLT 659

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 P  +G  +G +R+V  +    ++      
Sbjct: 660 AFELGAPPHAGAGLGLERIVAWMLELGDVRYASLF 694


>gi|302876675|ref|YP_003845308.1| asparaginyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307687350|ref|ZP_07629796.1| asparaginyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302579532|gb|ADL53544.1| asparaginyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 463

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 105/356 (29%), Gaps = 41/356 (11%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T   
Sbjct: 122 AHLRPRSNTFSAVFRVRSLAAYAIHKFFQERGFVYVHTPIITGSDCEGAGEMFKVTTLDF 181

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   +   L  S + S +    A    ++ F   +R        H
Sbjct: 182 DNVKKTEEGKIDYQDDFFGRETNLTVSGQLSAETFALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M    ++I+                    FS      + E 
Sbjct: 241 AAEFWMIEPEMAFAELKDYMDTAEDMIKYIISYV----MENAPEEMEFFSNFVDKGLKER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N + G                  Q++G+   +   W           +   +   
Sbjct: 297 LDNVVNSEFGRVSYTE-------AVDILQKSGVEFQYPVQWGIDLQTEHERYLSE-VVFK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L      L     E++   ++  R +    
Sbjct: 349 RPVFVTDYPKEIKAFYMRINDDGKTVAAADL------LAPGIGEIIGGSQREERLDILEA 402

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++          +L        + +G  +GF+R++M +TG +NI +VI  P +
Sbjct: 403 RLAELGLNKEDY-WWYLELRKYGETKHAGFGLGFERILMYLTGMSNIRDVIPFPRT 457


>gi|262365024|gb|ACY61581.1| asparaginyl-tRNA synthetase [Yersinia pestis D182038]
          Length = 466

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 114/363 (31%), Gaps = 55/363 (15%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---------------- 52
            H R R  L       R+ +  ++  +F EN +  + +  +  S                
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 53  ---PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              P  +T    FS     +D   K  +L  S + + +    A   K++ F   +R    
Sbjct: 185 ENLPRTDTGAVDFS-----EDFFGKEAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENS 238

Query: 110 GC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A  S + +      +++   +       + +  +   F+E    
Sbjct: 239 NTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAV----LNARADDMKFFAERVDK 294

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +   R+   D           D          +G +  +D +W    S      +  
Sbjct: 295 DAVDRLPRFVTSDFAQV-------DYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAE 347

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                   +   YP    A       D +             L     E++   ++  R 
Sbjct: 348 KHFKAPVVVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERL 400

Query: 289 E-KEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +  + +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  
Sbjct: 401 DVLDARLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPF 457

Query: 346 PFS 348
           P +
Sbjct: 458 PRT 460


>gi|125718192|ref|YP_001035325.1| asparaginyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|166232741|sp|A3CNM0|SYN_STRSV RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|125498109|gb|ABN44775.1| Asparaginyl-tRNA synthetase, putative [Streptococcus sanguinis
           SK36]
          Length = 448

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 121/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPAAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMNDLGMDTTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|297584385|ref|YP_003700165.1| asparaginyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142842|gb|ADH99599.1| asparaginyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 429

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/349 (16%), Positives = 110/349 (31%), Gaps = 43/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F E  F +ID   L   S          
Sbjct: 114 MDHRHLWLRSR--KQHAIMKIRNEIIRATYEFFNEQGFTKIDPPILTGSSAEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T L    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTNLFHTKYFDEDAYLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +++ +    N +    +   Q             +  E I+            
Sbjct: 224 PEMAFMDHDESLVLQENYVSFVVQAVLQNCKLELKTLERDTATLEKIS------------ 271

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                     P   + Y +A     +  ++  W + F       I           +  Y
Sbjct: 272 ---------APFPRISYDEAISFLQKEGYEIEWGEDFGAPHETAIAEAH--EKPVFITNY 320

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++    QR    + M+++   +N
Sbjct: 321 PKDIKAFYMKPHPERDDVVLCADLIAP-----EGYGEIIGGS-QRIDDAELMKQRYAEHN 374

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +    + +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 375 LSEDAYKWYLDLRKYGTVPHSGFGLGLERTVAWISGTEHVRETIPFPRL 423


>gi|150010294|ref|YP_001305037.1| asparaginyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|166231669|sp|A6LIA1|SYN_PARD8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|149938718|gb|ABR45415.1| asparaginyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 468

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 113/358 (31%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F +  F    +  +  S       +   +T+  
Sbjct: 124 AHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQMFQVTTKNL 183

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A   +I+ F   +R        H
Sbjct: 184 YDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATA-LGQIYTFGPTFRAENSNTPRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M+     I+   + A            + F +       E 
Sbjct: 243 LAEFWMIEPEVAFNDITDNMELAEEFIKYCVQWALDNCMEDIKFLNDMFDK-------EL 295

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
            AR   +   + +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 296 IARLEGVLKDSFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERFLVEDH--F 352

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 353 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLMTRIDE- 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +      +   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 ------LGIPMKDM-WWYLDTRRFGTVPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 462


>gi|159110974|ref|XP_001705722.1| Aspartyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157433811|gb|EDO78048.1| Aspartyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 555

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/339 (17%), Positives = 121/339 (35%), Gaps = 40/339 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +  +  R+ I    R +  +  FIEI++  +    S G           +   ++     
Sbjct: 244 QAIMRVRSAIAHEFRSFLDKAGFIEINTPKIVAGTSEGGAA--------VFNVNYFNTKA 295

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYR-AHESYEQLMK 134
            L  SP+   +  +++G  +++     +R        H  EF  L+     +ESY +++ 
Sbjct: 296 CLAQSPQLYKQMCISSGFGRVYEVGPVFRAEHSHTHRHLCEFIGLDLEMEIYESYTEILV 355

Query: 135 DCMNIIRCAAEVANQKIFSFQ--NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
              ++++   +    +              + PE +  A+        D    L      
Sbjct: 356 LLGDLMKHIFKAVEARCSKEMSIVRTQYDLTAPEPLVWADETVIVTFCDGIKML------ 409

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANI 251
                    Q+AG   +  D  S    R L + I+     +   ILD++P          
Sbjct: 410 ---------QEAGYEASPLDDLSTENERALGKLIKEKYNTD-FYILDKFPLNARPFYTMP 459

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P D R++  ++++    E+C+    + DP       EK+ +E+     E+      ++ 
Sbjct: 460 DPHDGRYSNSYDMFIRGEEICSGAQRVHDP----ELLEKQCRERNV-DPESL---RSYID 511

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                     G  +G +R+VML+ G  N  +    P +Q
Sbjct: 512 AFRYGCAPHGGAGLGLERIVMLMLGIENCRQTCLFPRTQ 550


>gi|327470825|gb|EGF16281.1| asparagine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 448

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 121/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQAHENDEDADYEHLEN---------------GDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPAAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMNDLGMDTTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|225575661|ref|ZP_03784271.1| hypothetical protein RUMHYD_03754 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037118|gb|EEG47364.1| hypothetical protein RUMHYD_03754 [Blautia hydrogenotrophica DSM
           10507]
          Length = 484

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 104/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRA 61
            H R R          R++   ++  +F E  F+ +++  +  S      E    T +  
Sbjct: 143 THLRPRTNTFQAVFRVRSLTAYAIHRFFQERGFVYVNTPLITGSDCEGAGEMFRVTTLDP 202

Query: 62  F-------STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                    T    QD   K   L  S + + +    A    I+ F   +R        H
Sbjct: 203 VNPPLKEDRTVDYGQDFFGKETNLTVSGQLNGETYAQA-FRNIYTFGPTFRAENSNTTRH 261

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M     +++                  N F+      + + 
Sbjct: 262 AAEFWMIEPECAFADLQDNMDLAEAMLKYVISYV----LENAPEEMNFFNSFIDKGLLDR 317

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N + G                  ++   +      W           +   +   
Sbjct: 318 LNHVLNSEFGHVTYTE-------AVEILEKNNDKFDFKVYWGCDLQTEHERYLTEQVFKK 370

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +     I       +  D  ++  +   E+ 
Sbjct: 371 PV-FVTDYPKEIKAFYMKLNEDGKTVAAMDCLVPGIGEIIGGSQREDDYDKLKKRMDELG 429

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K        P D DF   L      + SG  +GF+R VM +TG +NI +VI  P +
Sbjct: 430 LK--------PEDYDFYMDLRKYGSTRHSGYGLGFERCVMYLTGMSNIRDVIPFPRT 478


>gi|228469775|ref|ZP_04054733.1| asparaginyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228308614|gb|EEK17365.1| asparaginyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 471

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 109/357 (30%), Gaps = 40/357 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       L  R+ +  ++  +F E  +  + +  +  S       +  F+   +
Sbjct: 127 AHLRPRTNTFAAVLRIRHNMAYAIHTFFHERGYFYLHTPIITSSDAEGAGQM--FTVTTL 184

Query: 68  IQDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             + +           K  +     L  S +    +L A     I+ F   +R       
Sbjct: 185 DMNKLPLAKDGSVDYSKDFFGKHTSLTVSGQL-EGELGAMALGGIYTFGPTFRAENSNTP 243

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E          +   + A              + +       
Sbjct: 244 RHLAEFWMVEPEVAFMDNEGNQDLAEAFTKHCLQWALDHCMDDLEFLAEHYDK------- 296

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E   R   +     +         +L  +A + G +      W    +      +     
Sbjct: 297 ELIERIRFVVERPFVRTTYTEGVAIL-EEAVRNGKKFEFPVYWGADLASEHERYLVEQH- 354

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
            N   I+  YP    A       D +  +  ++   +I       E    I++     +E
Sbjct: 355 YNAPVIMTDYPKEIKAFYMKQNEDGKTVRGMDVLFPHIGEIIGGSERETDIDKLTARAQE 414

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  K K  +  + +D             +G  +GF+RL++ VTG  NI +VI  P +
Sbjct: 415 VGIKDK--DLWWYLDTR----RYGSAPHAGFGLGFERLLLFVTGMTNIRDVIPFPRT 465


>gi|297527051|ref|YP_003669075.1| asparaginyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255967|gb|ADI32176.1| asparaginyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 423

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 118/353 (33%), Gaps = 48/353 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           + ++  W R         +  ++ +  + REYF+EN + E+    L  S   G  T    
Sbjct: 107 LDNRHLWIRSRKLT--ETMKIKHSVLRAGREYFIENGWWEVTPPILTASAVEGGAT---- 160

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L    +  K  YL  S +   + L+ +  EK++    ++R  +     H  E+  L
Sbjct: 161 ----LFPVKYFDKTAYLSQSAQLYLEALIYS-LEKVWSLTTSFRAEKSRTRRHLAEYWHL 215

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A  + E +M+    ++    +   +                               
Sbjct: 216 EAEAAWYNMEDMMRVAEELVAHIVQYVLEHNR--------------------RQLEILGR 255

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           +L    +  + P   + Y +A +   +   +  W D         +   +  +    +  
Sbjct: 256 NLEILKNYVEPPYPRIRYDEAIEILQKKGVNIEWGDDLGADEERVL--TMEFDKPFFITH 313

Query: 241 YPAPESALANI-YPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +P    +      P + +    F+L A     E+    +   D  +  +R  ++      
Sbjct: 314 FPKEIKSFYMKLDPENEKLALGFDLLAPEGYGEIIGGSEREDDYNKLLNRIIEQ------ 367

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            YN      + +L          SG  +G +RLVM + G ++I + I  P  +
Sbjct: 368 GYNPEDY--KWYLDLRKYGSVPHSGFGLGIERLVMWIAGLDHIRDAIPFPRFR 418


>gi|238785825|ref|ZP_04629795.1| Asparaginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238713278|gb|EEQ05320.1| Asparaginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 463

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 113/363 (31%), Gaps = 55/363 (15%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---------------- 52
            H R R  L       R+ +  ++  +F EN +  + +  +  S                
Sbjct: 122 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 181

Query: 53  ---PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              P  +T    FS     +D   K  +L  S + + +   +A   K++ F   +R    
Sbjct: 182 ENLPRTDTGAVDFS-----EDFFGKEAFLTVSGQLNGETYASA-LSKVYTFGPTFRAENS 235

Query: 110 GC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A  S + +      +++   +       + +  +   F+E    
Sbjct: 236 NTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAV----LNERADDMKFFAERVDK 291

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +   R+   D                    + +G +  +D +W    S      +  
Sbjct: 292 DALDRLQRFVTSDFAQVNYTD-------AIEILKASGQKFENDVSWGIDLSSEHERYLAE 344

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHR 287
                   +   YP    A       D +     ++ A  I E+               R
Sbjct: 345 KHFKAPVVVK-NYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDAR 403

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            E+    K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  
Sbjct: 404 LEEMGLNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPF 454

Query: 346 PFS 348
           P +
Sbjct: 455 PRT 457


>gi|332359710|gb|EGJ37527.1| asparagine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 448

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 121/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPAAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMNDLGMDTTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|262382421|ref|ZP_06075558.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262295299|gb|EEY83230.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 468

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 113/358 (31%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F +  F    +  +  S       +   +T+  
Sbjct: 124 AHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQMFQVTTKNL 183

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A   +I+ F   +R        H
Sbjct: 184 YDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATA-LGQIYTFGPTFRAENSNTPRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M+     I+   + A            + F +       E 
Sbjct: 243 LAEFWMIEPEVAFNDITDNMELAEEFIKYCVQWALDNCMEDIKFLNDMFDK-------EL 295

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
            AR   +   + +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 296 IARLEGVLKDSFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERFLVEDH--F 352

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 353 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLMSRIDE- 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +      +   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 ------LGIPMKDM-WWYLDTRRFGTVPHSGFGLGFERLLLFVTGMGNIRDVIPFPRT 462


>gi|195344600|ref|XP_002038869.1| GM17213 [Drosophila sechellia]
 gi|194133999|gb|EDW55515.1| GM17213 [Drosophila sechellia]
          Length = 1088

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 117/392 (29%), Gaps = 86/392 (21%)

Query: 17  RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRK 74
             +  L  R+ +   +REY +    F+E+++ +L + +PG       F        H   
Sbjct: 595 DMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQE---FVVPTRKAGHF-- 649

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
              L  SP+   + L++ G ++ F  A  +R+       QPEFT L+   +  S + +M+
Sbjct: 650 -YSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSRDDIMQ 708

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
                +R           S+        +    IT  EA  +Y   D   T       + 
Sbjct: 709 LIEETLRY----------SWPKDFPRLQTPFRRITYEEAMEKY-GNDKPDTRFGFLLNNV 757

Query: 195 HLLYLQAQQAGIRVAH-----------------------------------DDTWSDIFS 219
             +  ++ +   +                                           D   
Sbjct: 758 SEIIEKSDEFKEKYDDLGAYAIVVRASEAFWNGAARKHYESLGKSSRRALLGRIRLDYQD 817

Query: 220 RILIEKIEPNLGINCCTILDRYPAPES------------ALANIYPADPRF--------- 258
            ++               +  +P  E                  +  D            
Sbjct: 818 FLVENAKIKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLENFATSCENLE 877

Query: 259 ---TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
              ++ ++L     E+      + D   Q    E+ ++         +      L+ L  
Sbjct: 878 SIRSQAYDLVLNGQEVGGGSIRIHDRDMQHFILEQILKI-------PHDHLSHLLSALES 930

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA+G DR + ++  A +I +VI  P
Sbjct: 931 GCPPHGGIALGLDRFIAILCRARSIRDVIAFP 962


>gi|217967320|ref|YP_002352826.1| asparaginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336419|gb|ACK42212.1| asparaginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 433

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 112/346 (32%), Gaps = 42/346 (12%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W R    ++   L  R+ +  ++R++  E  F+ ID+  L  S    T      T L
Sbjct: 120 RHLWIRSR--KQNAILRIRSEVVKAIRDFLDEKGFVLIDAPILTPSSCEGT------TTL 171

Query: 67  IIQDHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
              D+      YL  S +    +       K++CF  A+R  +     H  EF M+E   
Sbjct: 172 FSLDYFDLGKAYLSQSGQLYM-EAACMAFGKVYCFGPAFRAEKSKTRRHLTEFWMVEPEM 230

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A   ++  MK    ++    +   +K      +        E +        Y       
Sbjct: 231 AFWDWQDNMKLQEELVSYIVQRVLEKRKRELEILERDTKPLEKVVPPFPRITY------- 283

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                            ++ G  + + D +      I+  +       +    +  YPA 
Sbjct: 284 ----------REAIEILKRNGQDIEYGDDFGGDEETIISNQ------FDKPVFIHHYPAK 327

Query: 245 E-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                    P +P      +L            E++    QR    K +++K + YN   
Sbjct: 328 IKPFYMQPDPENPNEVLNNDL-----LAPEGYGEIIGGS-QRIHDLKLLEKKLEEYNLPR 381

Query: 304 PIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + E +L          SG  +G +R V  + G  ++ E I  P  
Sbjct: 382 EVFEWYLDLRRYGSVPHSGFGLGIERTVAWICGLKHVREAIPFPRM 427


>gi|42408999|dbj|BAD10253.1| putative Aspartyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|125580758|gb|EAZ21689.1| hypothetical protein OsJ_05322 [Oryza sativa Japonica Group]
          Length = 508

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 112/339 (33%), Gaps = 45/339 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  I++  R+  +   F+ I +  L    S G           +   D+  +P 
Sbjct: 200 QAIFRVQCEIENIFRQVLLSEGFVGIHTPKLIGGSSEGGAA--------VFKLDYNGQPA 251

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  +  G E++F     +R  +     H  EF  L+   A + +   + D
Sbjct: 252 CLAQSPQLHKQMAICGGFERVFEVGPVFRAEDSNTHRHLCEFVGLDMEMAIKGHYSEVCD 311

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +  A      K  + +    N     + +       R                +  
Sbjct: 312 VVDRLFVAMFDHLNKNCAKELEAINRQYPFKPLKYLPKTLRI---------------EYD 356

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
                 ++AG+ V      +    + L E +      +   +L RYP+            
Sbjct: 357 EGIRMLKEAGVHVEAMGDLNTESEKKLGELVHTKYDTD-FYMLCRYPSAVRPFYTMPCSD 415

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFL 310
           DPR++  F+++    E+ +    +  P        ++ +E+         ID      ++
Sbjct: 416 DPRYSNSFDVFVRGEEIISGAQRVHVP----EVLARQAEER--------GIDVGSIAAYV 463

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+VML  G  NI +    P  
Sbjct: 464 DAFRYGAPPHGGFGVGLERVVMLFCGLGNIRKASLFPRD 502


>gi|322385688|ref|ZP_08059332.1| asparagine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270426|gb|EFX53342.1| asparagine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 448

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/348 (18%), Positives = 117/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                ++++ +      ++   +                  E     VAE F R    D 
Sbjct: 236 EYNFVTHDESLDLQEAYVKALIQGVLD-RAPQALETLERDVELLKRYVAEPFKRVTY-DE 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 294 AIDLLQVHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVVNYP 340

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 AAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVAKMNELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 TTEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|257063195|ref|YP_003142867.1| asparaginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256790848|gb|ACV21518.1| asparaginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 467

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 113/356 (31%), Gaps = 38/356 (10%)

Query: 13  DFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
               R    R     R++   +L E+F E  F+ +++  +  S       +   +T    
Sbjct: 124 HLRPRTNLFRAVFRVRSVAAYALHEFFQERGFVYVNTPIITASDAEGAGEMFRVTTIDPA 183

Query: 69  QDHIR--------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
              +         +  +     L  S +   +    A    ++ F   +R  +     H 
Sbjct: 184 NPPLDDKGNVDYSQDFFGKATNLTVSGQLQAESFAMA-FGDVYTFGPTFRAEDSNTARHA 242

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    +  M    ++++       +K         N F+      + E  
Sbjct: 243 AEFWMVEPEIAFADLDDDMNLAEDMLKHVINTVLEKC----PDEMNMFNSFVDKGLIERL 298

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
              AN D           +   + L A   G +  +  +W           +        
Sbjct: 299 QHVANSDFIRVTY----TEAVDILLDAAAKGHKFDYPVSWGIDLQTEHERYLTEEHFKKP 354

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEMQ 293
              +  YP    A       D +     +     I       E++   ++  R +  E +
Sbjct: 355 T-FVTDYPVEIKAFYMRLNDDGKTVAAMDCLVPGI------GEIVGGSQREERLDVLENR 407

Query: 294 EKKK-IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++  +  E Y    D         + +G  +GF+R+VM +TG +NI +V+  P +
Sbjct: 408 IRELDMDPEQYKFYCDLRR--YGSCRHAGFGLGFERMVMYLTGVSNIRDVLPHPRT 461


>gi|34849431|gb|AAP58930.1| asparagine/asparaginyl-tRNA synthetase [Spiroplasma kunkelii
           CR2-3x]
          Length = 455

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 104/348 (29%), Gaps = 29/348 (8%)

Query: 12  RDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
                +   F      R+    ++ E+F +N FI + +  +  +         +F     
Sbjct: 120 PHLRAKTNTFNAVFRIRSSSSFAIHEFFNKNNFIYVHTPIITGNDAEGAGE--SFIVTTR 177

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             ++  +  +     L  S +   +    A    ++ F   +R        H  EF M+E
Sbjct: 178 TDNNYNEDFFGKKASLTVSGQLHAEGFAQA-FRNVYTFGPTFRAENSNTTRHAAEFWMIE 236

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    E+ M     +I+          F   +   +  +      + E      N +
Sbjct: 237 PEISFIDLEENMTLIEKMIKHIIIYL----FINNHYELDFLNNNVDDKLLERLKSVLNDE 292

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                         +L     +       D  W           +   +     T L  Y
Sbjct: 293 FAHLSY---TKAIEILQKAVTKGQKFENPDIFWGMDLQTEHERYLCE-IETKKPTFLFNY 348

Query: 242 PAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    A       D +     +L    I EL        D       F +  + K    +
Sbjct: 349 PKEIKAFYMKINDDNKTVAACDLLVPGIGELVGGSVRENDYD---KIFSRCNELKIPTTD 405

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + ID   L       +S+G  +GF+R +M VTG  NI +VI  P +
Sbjct: 406 LQWYID---LRK-YGYYKSAGFGLGFERFIMYVTGMTNIRDVIPFPRT 449


>gi|311068749|ref|YP_003973672.1| asparaginyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869266|gb|ADP32741.1| asparaginyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 430

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 108/348 (31%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F    F+++D   L   +P         
Sbjct: 114 MDHRHLWLRSK--RQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFATKYFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   + + ++   N +    +   +      N      S+ E I        Y    
Sbjct: 224 PEMAFVEFNENLEVQENYVSFVVQSVLENCKIELNTLGRDTSKLEQIKAPFPRITY---- 279

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++ G     D  W D F       I  +   +    +  Y
Sbjct: 280 -------------DEALAFLKEKGFD---DIEWGDDFGAPHETAIAESY--DKPVFITHY 321

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            D        +   ++       E++   E+ H  E      K+   E
Sbjct: 322 PTSLKPFYMQPAEDREDV----VLCADLIAPEGYGEIIGGSERIHDMELLEARLKEHGLE 377

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +    + +           SG  +G +R V  ++GA ++ E I  P  
Sbjct: 378 SDAY-KWYAELRKYGSVPHSGFGLGLERTVAWISGAPHVRETIPFPRL 424


>gi|298374691|ref|ZP_06984649.1| asparagine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298269059|gb|EFI10714.1| asparagine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 468

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 113/358 (31%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F +  F    +  +  S       +   +T+  
Sbjct: 124 AHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQMFQVTTKNL 183

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A   +I+ F   +R        H
Sbjct: 184 YDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATA-LGQIYTFGPTFRAENSNTPRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M+     I+   + A            + F +       E 
Sbjct: 243 LAEFWMIEPEVAFNDITDNMELAEEFIKYCVQWALDNCMEDIKFLNDMFDK-------EL 295

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
            AR   +   + +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 296 IARLEGVLKDSFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERFLVEDH--F 352

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 353 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLMTRIDE- 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +      +   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 ------LGIPMKDM-WWYLDTRRFGTVPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 462


>gi|289435245|ref|YP_003465117.1| asparaginyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171489|emb|CBH28033.1| asparaginyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 430

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 105/357 (29%), Gaps = 58/357 (16%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F++ID   L   +P         
Sbjct: 114 MDHRHLWLRSN--RQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFEEDAFLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPFSEPEYITVAEAF 174
              A    E  +K   N +    +                 +      +    IT  E  
Sbjct: 224 PEMAFYKLEDSLKVQENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTE-- 281

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                                       + G     D  W D F       I  +     
Sbjct: 282 ----------------------AIDLLHKLGFD---DIVWGDDFGAPHETAIADS--FEK 314

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQ 293
              +  YP            +        +   ++       E++   E+ H  E  + +
Sbjct: 315 PVFITHYPKAIKPFYMPEDPENDQV----VLCADMIAPEGYGEIIGGSERIHDLETLQAR 370

Query: 294 EKK-KIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K   +  E Y     ++          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 371 MKDFDLDQEAY---SWYIDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRL 424


>gi|238919270|ref|YP_002932785.1| asparaginyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|238868839|gb|ACR68550.1| asparaginyl-tRNA synthetase, putative [Edwardsiella ictaluri
           93-146]
          Length = 466

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 108/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  YF EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRYFNENGYFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRNDAGKVDYSEDFFGREAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +      +++       ++    +  +   F++       + 
Sbjct: 244 LAEFWMVEPEVAFADLNDIAGVAEGMLKYVFNAVLEE----RADDMAFFAQRVDKDAIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        +  G +  +   W    S      +       
Sbjct: 300 LQRFVSSDFAQV-------DYTDAITILESCGKQFENPVFWGVDLSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDMLDK 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++  +    D  +   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 406 RLDEMGLKKE--DYWWYRDLRRYGTVPHAGFGLGFERLVAYVTGVQNVRDVIPFPRT 460


>gi|327463305|gb|EGF09626.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 448

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 121/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPAAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMNDLGMDTTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|325681187|ref|ZP_08160717.1| asparagine--tRNA ligase [Ruminococcus albus 8]
 gi|324107109|gb|EGC01395.1| asparagine--tRNA ligase [Ruminococcus albus 8]
          Length = 457

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/369 (13%), Positives = 108/369 (29%), Gaps = 52/369 (14%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PG 54
           +  +P         H R R       +  R+++  ++  Y+ +  FI +++  +  S   
Sbjct: 115 LRTMP---------HLRGRTNTFNAVMRVRSVLAQAIHSYYQDRNFIYVNTPLITGSDCE 165

Query: 55  NETHIRAFSTELIIQDHIRKPLY-----------LQTSPEFSCKKLLAAGEEKIFCFAHA 103
               +   +T    QD+  +  Y           L  S +   +    A   KI+ F  +
Sbjct: 166 GAGEMFRVTTIGFSQDYKTEDDYDAADFFGRRAGLSVSGQLEGEMAATAM-GKIYTFGPS 224

Query: 104 WRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           +R        H  EF  +E   A    + +++   ++++       +K           F
Sbjct: 225 FRAENSNTPKHLAEFWHVEPEIAFAELDDVIEVAEDMVKHVIGTVLEKCPDEIAFFDAHF 284

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
            +     + E  +               +          +++G    +   W        
Sbjct: 285 EKGLKARLEELISHEFG-----------RVTYTEAIELLKKSGENFVYPVEWGCDLQTEH 333

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +           +  YP    +       D +     +L    +       E     
Sbjct: 334 ERYLSEK-VFGKAVFVTDYPKEIKSFYMKQNPDGKTVAAVDLLVPGVGEIIGGSEREADY 392

Query: 283 EQRHRFEKEMQEKKKIYNETYPID--EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
           +         +    +      +D   D+L           G  +GF+RL+M  TG  NI
Sbjct: 393 D---------KLIAAMKERNMNLDLYSDYLDLRKYGTVPHGGFGLGFERLIMYTTGVQNI 443

Query: 340 NEVIWTPFS 348
            +VI  P +
Sbjct: 444 RDVIMFPRT 452


>gi|254362094|ref|ZP_04978216.1| asparagine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093653|gb|EDN74612.1| asparagine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 467

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 106/356 (29%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPVITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRGENGKVDFNQDFFGKESFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A        K   ++++   +    +             + E I+  E 
Sbjct: 245 LAEFWMMEPEVAFADLNDNAKLAEDMLKYVFKAVLAERKDDMEFFVKHVDK-EAISRLEN 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F                Q D         ++G       +W    S      +      +
Sbjct: 304 F----------INSPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEHFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   Q
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDQ 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMNEMGL--NPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIRDVIPFPR 460


>gi|317473689|ref|ZP_07932976.1| asparaginyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316898810|gb|EFV20837.1| asparaginyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 461

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 107/357 (29%), Gaps = 45/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELI 67
            H R R          R++I  ++ ++F+E  F+ + +  +          +  F    +
Sbjct: 122 AHLRPRANTFQAVYRVRSLIAYAIHKFFMERDFVYVHTPIISGQDCEGAGEM--FQVTTL 179

Query: 68  IQDHIRK--------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
             + + +          +     L  S +    +  A     I+ F   +R  E     H
Sbjct: 180 DLEELSQGKKLDYREDFFERETSLTVSGQL-NGEAFAQAFRNIYTFGPTFRAEESNTTRH 238

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M    ++I+   +                F+E     + + 
Sbjct: 239 AAEFWMIEPEMAFADLEDNMLLAEHMIKYIIQYV----LEQAPEEMGFFNEFVDKGLLDR 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               A  +                    ++   +  +  +W           +   +   
Sbjct: 295 LHHVAESEFARITYTE-------AIDILKEHNNKFQYPVSWGTDLQTEHERYLTEKVFKK 347

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    I       +  D +E+         
Sbjct: 348 PV-FVTDYPKEIKAFYMKQNPDGKTVAAVDLLVPGIGEIIGGSQREDDLEKLQM------ 400

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +    E    D DF   L      + SG  +GF+R+VM VTG  NI +VI  P +
Sbjct: 401 --RMGELEMNLSDYDFYLDLRKYGSTRHSGFGLGFERMVMYVTGMANIRDVIPFPRT 455


>gi|255012440|ref|ZP_05284566.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 468

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 113/358 (31%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F +  F    +  +  S       +   +T+  
Sbjct: 124 AHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQMFQVTTKNL 183

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A   +I+ F   +R        H
Sbjct: 184 YDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATA-LGQIYTFGPTFRAENSNTPRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M+     I+   + A            + F +       E 
Sbjct: 243 LAEFWMIEPEVAFNDITDNMELAEEFIKYCVQWALDNCMEDIKFLNDMFDK-------EL 295

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
            +R   +   + +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 296 ISRLEGVLKDSFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERFLVEDH--F 352

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 353 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLMTRIDE- 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +      +   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 ------LGIPMKDM-WWYLDTRRFGTVPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 462


>gi|222151349|ref|YP_002560505.1| asparaginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222120474|dbj|BAH17809.1| asparaginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 431

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 104/350 (29%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F E  F +ID   L   +P   + +  F
Sbjct: 115 MDHRHLWLRSK--RQHAVMKIRNEIIRATYEFFNEQGFTKIDPPILTGSAPEGTSEL--F 170

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 171 HTK-----YFDEDAFLSQSGQLYMEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  ++     +    +   +                      +   +    D
Sbjct: 225 PEMAFYRHEDSLEVQEQYVTHLVKSVLKNC--------------------QLDLKILGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +    +   D  W D F       I  +   +    +  Y
Sbjct: 265 TTKLEQITTPFPRITYTDAIKFLKEQGFDDIEWGDDFGAPHETAIANHY--DKPVFIINY 322

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKKKI- 298
           P           P +    K  +     +       E++   E+    E  + + K+   
Sbjct: 323 PTSIKPFYMQPNPEEEGTVKCAD-----MIAPEGYGEIIGGSERIDDLELLQQRIKEHGL 377

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D           SG  +G +R V  ++G  ++ E    P  
Sbjct: 378 DPEAYSYYTDLRK--YGSVPHSGFGLGLERTVAWLSGVEHVRETSPFPRL 425


>gi|291546668|emb|CBL19776.1| asparaginyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 463

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 105/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRA 61
            H R R          R++   ++ ++F E  F+ + +  +  S      E    T +  
Sbjct: 122 THLRPRTNTFQAVFRVRSLCAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMFQVTTLDP 181

Query: 62  FSTELIIQDHIR--KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            +  L     +   +  +     L  S + + +    A    I+ F   +R        H
Sbjct: 182 KNIPLTEDGSVDYSQDFFGKETNLTVSGQLNGETYAQA-FRNIYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M+    +++          F       N F+      + + 
Sbjct: 241 AAEFWMIEPECAFADLQDAMELAEAMLKYVIRYV----FENAPEEMNFFNSFIDKGLLDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N +                    ++   +  +   W           +   +   
Sbjct: 297 LNHVLNSEFAHVTYTE-------AVEILEKNNDKFDYKVFWGCDLQTEHERYLTEQVYKR 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +     I       +  D  ++      E+ 
Sbjct: 350 PV-FVTDYPKEIKAFYMKLNEDGKTVAAMDCLVPGIGEIIGGSQREDDYDKLKTRMDELG 408

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K        P D DF   L      + SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 409 LK--------PEDYDFYLDLRKYGSTRHSGFGLGFERCVMYLTGMGNIRDVIPFPRT 457


>gi|37525688|ref|NP_929032.1| asparaginyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|59798577|sp|Q7N622|SYN_PHOLL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|36785117|emb|CAE14046.1| asparaginyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 466

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 111/358 (31%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL-- 66
            H R R  L       R+ +  +L  +F EN +  + +  L  +   E     F      
Sbjct: 125 AHLRPRTNLIGAVARMRHTLAQALHRFFHENGYFWVSTP-LITAADTEGAGEMFRVSTLD 183

Query: 67  -------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          QD   +  +L  S + + +    A   K++ F   +R        
Sbjct: 184 LQNLPLTDKGEVDFNQDFFGREAFLTVSGQLNGEAYACA-LSKVYTFGPTFRAENSNTSR 242

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF MLE   A  +         N+++   + A  +    +  +   F+E     V  
Sbjct: 243 HLAEFWMLEPEIAFANLNDAATLAENMLKYVFKAALAE----RADDLQFFAERVDKDVIT 298

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              ++ N D         Q D        Q  G +  +   W    S      +      
Sbjct: 299 RLEKFINSDFA-------QIDYTSAIEILQNCGQKFENPVFWGVDLSSEHERYLAEKH-F 350

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               ++  YP    A       D +             L     E++   ++  R +   
Sbjct: 351 QAPVVVKNYPKDIKAFYMRMNDDGKTVAAL------DVLAPGIGEIIGGSQREERLDMLD 404

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +++       D  +   L        SG  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 405 KRLEEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLVAYVTGVPNVRDVIPFPRT 460


>gi|325694754|gb|EGD36660.1| asparagine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 448

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 121/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPAAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMNDLGMDTTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|303238742|ref|ZP_07325274.1| asparaginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593621|gb|EFL63337.1| asparaginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 464

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 103/358 (28%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +  F    +
Sbjct: 123 AHLRPRTNTYSAVFRIRSLAAYAIHKFFQERGFVYVHTPIITGSDAEGAGQM--FRVTTL 180

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +             +  +     L  S +   +    A    I+ F   +R       
Sbjct: 181 DMNNLPKTKEGSIDFNEDFFGKETNLTVSGQLEGETYCMA-FRNIYTFGPTFRAENSNTA 239

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+   ++++                    F+     T+ 
Sbjct: 240 RHAAEFWMVEPEIAFSDLSDDMELAEDMLKFIINYC----MENAPEEMEFFNSFVDNTLF 295

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N   G                  ++   +  +   W           +   + 
Sbjct: 296 ERLNNIVNSKFGHVTYTE-------AIELLKKEKDKFEYPVEWGTDLQTEHERYLTEQIF 348

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    +       E++   ++  R +  
Sbjct: 349 KKPV-FVTDYPKEIKAFYMRMNDDNKTVAAMDLLVPGV------GEIIGGSQREERLDYL 401

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +   ++          +L        + +G  +GF+R +M +TG +NI +VI  P +
Sbjct: 402 EKRMDELGLHKDDY-WWYLDLRKYGGTKHAGFGLGFERAIMYITGMSNIRDVISFPRT 458


>gi|225562887|gb|EEH11166.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 971

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/331 (15%), Positives = 107/331 (32%), Gaps = 28/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I +  R       FIEI +  LQ S   E+    F  +     +  +  +
Sbjct: 301 SQSIFRIQSAISNLFRAALDAQGFIEIHTPKLQSSA-TESGASVFEVK-----YFTREAF 354

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +AA  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 355 LAQSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEALET 414

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           +  +          E +   +        +    L+  D   R  
Sbjct: 415 IDSVLKEIFKGIYGRYRREVDIIKGQFPHEDLIWLDETPIIPFAEGIKLLN--DSGWRQD 472

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
               +    +    +    ++                   ILD++P        +  P +
Sbjct: 473 GEELSVNEDLGTRDEIRLGELI---------KEKYHTDYYILDKFPKSARPFYAMEDPEN 523

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
           P FT  F+++    E+ +    + D      R ++       I        E++L     
Sbjct: 524 PNFTNSFDIFVRGQEIVSGGQRIHDEKILEQRMKE-----AGINPLAM---EEYLEGFRW 575

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +RL+ML+    NI      
Sbjct: 576 GAPPHAGAGIGLERLLMLILKLGNIRLASLF 606


>gi|145591555|ref|YP_001153557.1| asparaginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145283323|gb|ABP50905.1| asparaginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 431

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/347 (17%), Positives = 113/347 (32%), Gaps = 39/347 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    + +  L  R+ +  ++ EYF +N F E+       +   E     F 
Sbjct: 116 LDVRHLWIRSR--KMQAVLKIRHTVFGAIHEYFRKNGFYEVHPPMFITAAV-EGGATLFK 172

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +     +  K +YL  S +F  + L+    EK++  A ++R        H  EF   E 
Sbjct: 173 VQ-----YFDKIVYLTQSSQFYLEALIYG-LEKVYTIAPSFRAEPSRTRRHLTEFWHAEM 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    E  +     +I    E    +      +        E          Y     
Sbjct: 227 EIAWAGMEDAVLVGEGVISHVVEKVLDERQEELRLLGRRIEPLEKAKPPFYRVSY----- 281

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                              Q+ G  +   D       R L +        +   +L  +P
Sbjct: 282 ------------DEAVDILQKKGFEIGWGDDIGADEERALSQ------DFDKPIVLYGFP 323

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
               A    +  +PR  +    +   + L     E++   E+ ++ E+ +++ K+     
Sbjct: 324 EKVKAFY--HRNNPRRPEVTLSFD--VLLPEGYGEVIGGGERIYQAEELIEKIKRFGLNP 379

Query: 303 YPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 ++          SG  +G DRL M + GA++I +V+  P  
Sbjct: 380 QDY-WWYIDLRRYGSVPHSGFGLGVDRLTMWIVGADHIRDVVPFPRD 425


>gi|15897124|ref|NP_341729.1| aspartyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284174365|ref|ZP_06388334.1| aspartyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|62287584|sp|Q980V3|SYD_SULSO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13813305|gb|AAK40519.1| Aspartyl-tRNA synthetase (aspS) [Sulfolobus solfataricus P2]
 gi|261601786|gb|ACX91389.1| aspartyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 429

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/337 (16%), Positives = 107/337 (31%), Gaps = 45/337 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  L  +++   S RE   ++ F+E+ +   +  +      +           +  K  +
Sbjct: 131 QAVLKIQSVAVKSFRETLYKHGFVEVFTPKIIASATEGGAQLFPVL-------YFGKEAF 183

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   K+LLA   E++F  A AWR  E     H  EF  ++   A   Y  +M   
Sbjct: 184 LAQSPQLY-KELLAGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEMAFADYNDIMALI 242

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             II        ++                     E   +  N           +     
Sbjct: 243 EQIIYNMINDVKREC--------------------ENELKILNYTPPNVRIPIKKVSYSD 282

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPAD 255
                +  G+ +   D            ++  N        +  +P             +
Sbjct: 283 AIELLKSKGVNIKFGDDIGT-----PELRVLYNELKEDLYFVTDWPWLSRPFYTKQKKDN 337

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P+ ++ F+L    +E+ +                 E   K +  N      E FL     
Sbjct: 338 PQLSESFDLIFRWLEIVSGSSRNHVKEVL------ENSLKVRGLNPESF--EFFLKWFDY 389

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            MP  +G  MG  R+++++TG  ++ EV+  P  +  
Sbjct: 390 GMPPHAGFGMGLARVMLMLTGLQSVKEVVPFPRDKKR 426


>gi|116873331|ref|YP_850112.1| asparaginyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123461236|sp|A0AK01|SYN_LISW6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116742209|emb|CAK21333.1| asparaginyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 430

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 103/355 (29%), Gaps = 54/355 (15%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F++ID   L   +P         
Sbjct: 114 MDHRHLWLRSN--RQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFEEDAFLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPFSEPEYITVAEAF 174
              A    E  ++   N +    +                 +      +    IT  EA 
Sbjct: 224 PEMAFYKLEDSLQVQENYVAYLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAI 283

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R                          + G     D  W D F       I  +     
Sbjct: 284 ER------------------------LHELGFD---DIVWGDDFGAPHETAIADS--FEK 314

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  YP            +        +   ++       E++   E+ H  E     
Sbjct: 315 PVFITHYPKAIKPFYMPEDPENNQV----VLCADMIAPEGYGEIIGGSERIHDLETLQAR 370

Query: 295 KKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +    +       +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 371 MEDFDLDQEAY-SWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRL 424


>gi|256839145|ref|ZP_05544655.1| asparaginyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256740064|gb|EEU53388.1| asparaginyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 468

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 113/358 (31%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F +  F    +  +  S       +   +T+  
Sbjct: 124 AHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQMFQVTTKNL 183

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A   +I+ F   +R        H
Sbjct: 184 YDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATA-LGQIYTFGPTFRAENSNTPRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M+     I+   + A            + F +       E 
Sbjct: 243 LAEFWMIEPEVAFNDIADNMELAEEFIKYCVQWALDNCMEDIKFLNDMFDK-------EL 295

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
            AR   +   + +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 296 IARLEGVLKDSFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERFLVEDH--F 352

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 353 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLMTRIDE- 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +      +   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 ------LGIPMKDM-WWYLDTRRFGTVPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 462


>gi|254520508|ref|ZP_05132564.1| asparaginyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914257|gb|EEH99458.1| asparaginyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 464

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 109/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFS-TEL 66
            H R R          R++   ++ ++F E  F+   +  +  S       +  F  T L
Sbjct: 123 AHLRPRSNAFSAVFRVRSVAAYAIHKFFQERGFVYTHTPLITGSDCEGAGEM--FRVTTL 180

Query: 67  IIQD---------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
            + +           ++  +     L  S +    +  A     ++ F   +R       
Sbjct: 181 DLHNVPKTEEGAIDFKQDFFGKESNLTVSGQL-NAECYALAFRNVYTFGPTFRAENSNTA 239

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M+   ++++   E    +           F++     + 
Sbjct: 240 RHAAEFWMIEPEIAFADLQDDMELAEDMLKYVLEYVLAECPE----EMAFFNQFVDKGIL 295

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +        D G                  ++A  +  +   W           +     
Sbjct: 296 DRLNHVMTSDFGKVTYTE-------AVEILKKADKKFEYPVEWGIDLQTEHERYLTEEHF 348

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    I       EL+   ++  R +  
Sbjct: 349 KKPV-FVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGI------GELIGGSQREERIDIL 401

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +   ++          +L        + +G  +GF+RL+M +TG +NI +VI  P +
Sbjct: 402 TKRMAELGLNEEDY-WWYLELRKYGETKHAGFGLGFERLIMYITGMSNIRDVIPFPRT 458


>gi|4512034|gb|AAD21582.1| aspartyl tRNA synthetase [Drosophila melanogaster]
          Length = 531

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 116/355 (32%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   E  F EI +  +  +  +E    
Sbjct: 205 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAA-SEGGAN 263

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K++     +R  +     H  EF  
Sbjct: 264 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVG 318

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                        +       +Y    E+  +   
Sbjct: 319 LDLEMAFKYHYHEVLHT---------------IGNTFTSIFKGLRDKYAKEIESVGQQYK 363

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +D    L+ P            ++AG+    ++  S    ++L   ++     +   ILD
Sbjct: 364 VDAFKFLEPPLILQFADGVAMLREAGVETGDEEDLSTPNEKLLGRLVKAKYDTD-FYILD 422

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P +P ++  ++++    E+ +    + DP        + + E+ K 
Sbjct: 423 KFPLAIRPFYTMPDPNNPVYSNSYDMFMRGEEILSGAQRIHDP--------EYLIERAKH 474

Query: 299 YNETYPIDED----FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 475 ----HGIDTSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMLPRD 525


>gi|16801076|ref|NP_471344.1| asparaginyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|20139892|sp|Q92AB2|SYN_LISIN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|16414511|emb|CAC97240.1| ansB [Listeria innocua Clip11262]
 gi|313618183|gb|EFR90265.1| asparaginyl-tRNA synthetase [Listeria innocua FSL S4-378]
 gi|313623164|gb|EFR93425.1| asparaginyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 430

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 103/355 (29%), Gaps = 54/355 (15%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F++ID   L   +P         
Sbjct: 114 MDHRHLWLRSN--RQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFDEDAFLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPFSEPEYITVAEAF 174
              A    E  ++   N +    +                 +      +    IT  EA 
Sbjct: 224 PEMAFYKLEDSLQVQENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAI 283

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R                          + G     D  W D F       I  +     
Sbjct: 284 ER------------------------LHELGFD---DIVWGDDFGAPHETAIADS--FEK 314

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  YP            +        +   ++       E++   E+ H  E     
Sbjct: 315 PVFITHYPKAIKPFYMPEDPENDQV----VLCADMIAPEGYGEIIGGSERIHDLETLQAR 370

Query: 295 KKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +    +       +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 371 MEDFDLDQEAY-SWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRL 424


>gi|313637223|gb|EFS02737.1| asparaginyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 430

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 105/357 (29%), Gaps = 58/357 (16%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F++ID   L   +P         
Sbjct: 114 MDHRHLWLRSN--RQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFEEDAFLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPFSEPEYITVAEAF 174
              A    E  +K   N +    +                 +      +    IT  E  
Sbjct: 224 PEMAFYKLEDSLKVQENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTE-- 281

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                                       + G     D  W D F       I  +     
Sbjct: 282 ----------------------AIDLLHKLGFD---DIVWGDDFGAPHETAIADS--FEK 314

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQ 293
              +  YP            +        +   ++       E++   E+ H  E  + +
Sbjct: 315 PVFITHYPKAIKPFYMPEDPENDQV----VLCADMIAPEGYGEIIGGSERIHDLETLQAR 370

Query: 294 EKK-KIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K   +  E Y     ++          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 371 MKDFDLDQEAY---SWYIDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRL 424


>gi|325571049|ref|ZP_08146621.1| asparagine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325156134|gb|EGC68320.1| asparagine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 432

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 110/349 (31%), Gaps = 41/349 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F +N FI+ID   L   +P         
Sbjct: 115 MDHRHLWLRSS--KQHAIMQIRNEIIRATYEFFNKNGFIKIDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTDLFETNYFDQKAYLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      +   +        D
Sbjct: 225 PEMAFMHQEESLEVQEQYVAFLVQNV--------------------LDNCDYALDVLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILDR 240
                     P   + Y  A +   +   DD  W D F       I      +    +  
Sbjct: 265 REVLKKYTKLPFPRISYDDAVELLQKNGFDDIQWGDDFGSPHETFIA--NSFDQPVFILN 322

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP             P  T+   +   ++       E++   E+    E  +++ +    
Sbjct: 323 YPKAIKPFYM----KPHPTREDVVICADMIAPEGYGEIIGGSERAIDHEYLLEQIRAHGL 378

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +       +L          +G  +G +R V  ++G  ++ E I  P  
Sbjct: 379 DENEY-SWYLDLRKYGSVPHTGFGLGLERTVTWLSGIEHVRESIPFPRL 426


>gi|316970288|gb|EFV54261.1| aspartate--tRNA ligase [Trichinella spiralis]
          Length = 487

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 114/357 (31%), Gaps = 44/357 (12%)

Query: 5   PSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPG 54
           P     N D     R               + ++    R+Y   N F+EI +  +  +  
Sbjct: 156 PLSHV-NLDTRLDNRVLDLRTVTSQAIFRLQAVVCDQFRKYLTSNGFVEIHTPKIISAA- 213

Query: 55  NETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
           +E     F        + ++  YL  SP+   +  +A    ++F     +R  +     H
Sbjct: 214 SEGGANVFEV-----SYFKRSAYLAQSPQLYKQMAIAGDFGRVFTIGSVFRAEDSNTHRH 268

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF  L+   A   +   +   +  +        +KI S +          E     E 
Sbjct: 269 LTEFIGLDLEMAFNFHYHEVVQLIGQMFIEMFKGLEKICSSEIAAVRKQYPAEPFEFTEP 328

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                              +        ++ G  +   D  S    ++L + ++     +
Sbjct: 329 ---------------ALILEYSQAIAILREHGENIGDFDDLSTPQEKLLGKLVKEKYQTD 373

Query: 234 CCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
              ILD++P           P + +++  +++Y    E+ +    + +P     R +   
Sbjct: 374 -FYILDKFPLCIRPFYTMPNPREKQYSNSYDMYMRGEEILSGAQRIHNPDLLIERAKHHN 432

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + KKI        E ++       P  +G  +G +R+ ML  G +N+      P  
Sbjct: 433 IDLKKI--------EAYIDSFRYGCPPHAGGGIGLERVTMLYLGLSNVRLASMFPRD 481


>gi|313632667|gb|EFR99644.1| asparaginyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 430

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 105/357 (29%), Gaps = 58/357 (16%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F++ID   L   +P         
Sbjct: 114 MDHRHLWLRSN--RQHAIMKIRNEIIRATYEFFNKEGFLKIDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFEEDAFLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPFSEPEYITVAEAF 174
              A    E  +K   N +    +                 +      +    IT  E  
Sbjct: 224 PEMAFYKLEDSLKVQENYVAFLVKAVLDNCRLELDRLGRDISHLEKMVAPFPRITYTE-- 281

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                                       + G     D  W D F       I  +     
Sbjct: 282 ----------------------AIDLLHKLGFD---DIVWGDDFGAPHETAIADS--FEK 314

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQ 293
              +  YP            +        +   ++       E++   E+ H  E  + +
Sbjct: 315 PVFITHYPKAIKPFYMPEDPENDQV----VLCADMIAPEGYGEIIGGSERIHDLETLQAR 370

Query: 294 EKK-KIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K   +  E Y     ++          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 371 MKDFDLDQEAY---SWYIDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRL 424


>gi|269121090|ref|YP_003309267.1| asparaginyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268614968|gb|ACZ09336.1| asparaginyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 462

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/354 (15%), Positives = 106/354 (29%), Gaps = 39/354 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F E  F+ + +  +  S       +   +T  +
Sbjct: 121 AHLRPRTNTFMAVFRVRSLMSYAIHKFFNERGFVYVHTPIITGSDTEGAGEMFQLTTLDL 180

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   K   L  S +    +      +  + F   +R  +     H
Sbjct: 181 KDIPKNDKGEVEYKDDFFGKQANLTVSGQL-NVETFCMAFKNTYTFGPTFRAEKSNTPKH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M    ++++                    F++    T+ + 
Sbjct: 240 VSEFWMMEPEIAFADLDVNMDIAEDMMKYIIRYV----LENAPEEMQFFNQFIDKTLLDR 295

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N + G                  ++A  +  +   W           +       
Sbjct: 296 LNGLVNSEFGRVTYTE-------AIEILKKADKKFEYPVEWGIDLQTEHERYLAEEHFKK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +  +  +L A  I       +  D  E+  +  K+M 
Sbjct: 349 PV-FVTDYPKDIKAFYMKLNEDGKTVRAMDLLAPGIGEIIGGSQREDNFEKLEQRIKDMN 407

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +K Y     + +            SG  +GF+R +M VTG  NI +VI  P 
Sbjct: 408 LNEKDYWWYMELRK------YGSVPHSGYGLGFERAIMYVTGMLNIRDVIPFPR 455


>gi|325092841|gb|EGC46151.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 971

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 108/331 (32%), Gaps = 28/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I +  R       FIEI +  LQ S   E+    F  +     +  +  +
Sbjct: 301 SQSIFRIQSAISNLFRAALDAQGFIEIHTPKLQSSA-TESGASVFEVK-----YFTREAF 354

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +AA  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 355 LAQSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEALET 414

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           +  +          E +   +        +    L+  D   R  
Sbjct: 415 IDSVLKEIFKGIYGRYRREVDIIKGQFPHEDLVWLDETPIIPFAEGIKLLN--DSGWRQD 472

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
               +    +    +    ++                   ILD++P P      +  P +
Sbjct: 473 GEELSVNEDLGTRDEIRLGELI---------KEKYHTDYYILDKFPKPARPFYAMEDPEN 523

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
           P FT  F+++    E+ +    + D      R ++       I        E++L     
Sbjct: 524 PDFTNSFDIFVRGQEIVSGGQRIHDEKILEQRMKE-----AGINPLAM---EEYLEGFRW 575

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +RL+ML+    NI      
Sbjct: 576 GAPPHAGAGIGLERLLMLILKLGNIRLASLF 606


>gi|301308376|ref|ZP_07214330.1| asparagine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300833846|gb|EFK64462.1| asparagine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 468

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 113/358 (31%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F +  F    +  +  S       +   +T+  
Sbjct: 124 AHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPIITASDCEGAGQMFQVTTKNL 183

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A   +I+ F   +R        H
Sbjct: 184 YDLKKDENGSIIYEDDFFGKQASLTVSGQLEGELAATA-LGQIYTFGPTFRAENSNTPRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M+     I+   + A            + F +       E 
Sbjct: 243 LAEFWMIEPEVAFNDITDNMELAEEFIKYCVQWALDNCMEDIKFLNDMFDK-------EL 295

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
            AR   +   + +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 296 IARLEGVLKDSFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERFLVEDH--F 352

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 353 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLMTRIDE- 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +      +   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 ------LGIPMKDM-WWYLDTRRFGTVPHSGFGLGFERLLLFVTGMGNIRDVIPFPRT 462


>gi|123441875|ref|YP_001005858.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332162184|ref|YP_004298761.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166232743|sp|A1JMN8|SYN_YERE8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122088836|emb|CAL11642.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318606238|emb|CBY27736.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325666414|gb|ADZ43058.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860164|emb|CBX70485.1| asparaginyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 466

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 114/363 (31%), Gaps = 55/363 (15%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---------------- 52
            H R R  L       R+ +  ++  +F EN +  + +  +  S                
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 53  ---PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              P  +T    FS     +D   K  +L  S + + +    A   K++ F   +R    
Sbjct: 185 ENLPRTDTGAVDFS-----EDFFGKEAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENS 238

Query: 110 GC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A  S + +      +++   +       + +  +   F+E    
Sbjct: 239 NTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAV----LNERADDMKFFAERVDK 294

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +   R+   D           D          +G +  +D +W    S      +  
Sbjct: 295 DAVDRLQRFVTSDFAQV-------DYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAE 347

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                   +   YP    A       D +             L     E++   ++  R 
Sbjct: 348 QHFKAPVVVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERL 400

Query: 289 E-KEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +  + +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  
Sbjct: 401 DVLDARLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPF 457

Query: 346 PFS 348
           P +
Sbjct: 458 PRT 460


>gi|261344270|ref|ZP_05971914.1| asparagine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282567872|gb|EFB73407.1| asparagine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 466

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 114/372 (30%), Gaps = 48/372 (12%)

Query: 3   QIPSQP---WWNRDFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
             P +    +     H R R  L       R+ +  +L  +F E  F  + +  +  S  
Sbjct: 111 MAPKRHSVEFLREAAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDT 170

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 QD   +  +L  S + + +    A   K++ F
Sbjct: 171 EGAGEMFRVSTLDYNNLPRTDKGEVDFSQDFFGREAFLTVSGQLNGEAYATA-LSKVYTF 229

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF MLE   A  + + +      +++ A + A     + +  + 
Sbjct: 230 GPTFRAENSNTSRHLAEFWMLEPEVAFANLDDIAGLAEKMLKYAFKAA----LTERRDDL 285

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
             F+E     V +   R+ N D           D        +  G +  +   W    S
Sbjct: 286 EFFAERVDKDVIDRLERFVNSDFAQV-------DYTDAVKILETCGQKFENPVYWGVDLS 338

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDEL 278
                 +          +   YP    A       D +     ++ A  I E+       
Sbjct: 339 SEHERYLAEQHFKAPVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQRE 397

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGA 336
                   R E+    K+         D  +   L        SG  +GF+RLV  VTG 
Sbjct: 398 ERLDMLDARLEEMGMNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLVAYVTGV 448

Query: 337 NNINEVIWTPFS 348
            N+ EVI  P +
Sbjct: 449 GNVREVIAFPRT 460


>gi|269114962|ref|YP_003302725.1| Aspartyl-tRNA synthetase (Aspartate-tRNAligase) [Mycoplasma
           hominis]
 gi|268322587|emb|CAX37322.1| Aspartyl-tRNA synthetase (Aspartate-tRNAligase) [Mycoplasma hominis
           ATCC 23114]
          Length = 564

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/418 (16%), Positives = 123/418 (29%), Gaps = 101/418 (24%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
              R    L  R+     +R +F +  +IE+++  L + +P      R +      +   
Sbjct: 130 REERMLNNLRLRHKFLLLVRNFFDKQGYIEVETPILGKSTPEG---ARDYLVPTRRKGRF 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA------- 125
                L  SP+   + L+AAG EK F  A  +R+ +     QPEFT L+   +       
Sbjct: 187 ---FALPQSPQLFKQLLMAAGFEKYFQIARVFRDEDLRKDRQPEFTQLDIEMSFGSQEEI 243

Query: 126 ---HESYEQLM-----------KDCMNIIRCAAEVANQKIFSFQNVNCNPF--------- 162
               E   + +              M+     A   N K  +        +         
Sbjct: 244 FKLCEDMWKDVLSQLGYKIETPFPKMDFFYSMAHYGNDKPDTRFGFLIEDYSKQFAAKYN 303

Query: 163 -------------SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                        +E + I           I     L   +Q +   L  +A++  I   
Sbjct: 304 KKFVKAIVFDRNINEHKQIINETFKKNNGQILDIFDLKEANQNEFQCLLDKAKEDNISTP 363

Query: 210 HDDTWSDIFSR----------------------------------ILIEKIEPNLGINCC 235
                ++                                      +     E        
Sbjct: 364 WAIISANDLEEDALKSLGAIRTIANDLYKLADPNQLNFLWLVNWPMFEYDRETKTYSPAH 423

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------E 289
               ++             +    K ++L     EL +    + DP  Q+  F      E
Sbjct: 424 HAFTQFEESTMKYLETGELEKVRAKSYDLVLNGFELGSGSIRIYDPKIQKKMFDVINLSE 483

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           K+ Q++             FL      +P  +GIA G +R++M++T + +I +VI  P
Sbjct: 484 KQQQDRFG----------FFLKAFEYGLPPHNGIAFGVERILMILTKSESIRDVIAFP 531


>gi|259156631|gb|ACV96574.1| lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS) [Vibrio
           fluvialis Ind1]
          Length = 287

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 17/142 (11%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 149 LRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+  G +++F     +RN 
Sbjct: 209 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGGFDRVFEINRNFRNE 264

Query: 108 EQGCLHQPEFTMLEWYRAHESY 129
                H PEFTM+E+Y A+  Y
Sbjct: 265 GLSPRHNPEFTMMEFYMAYADY 286


>gi|119493136|ref|ZP_01624042.1| asparaginyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119452790|gb|EAW33966.1| asparaginyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 463

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/355 (16%), Positives = 111/355 (31%), Gaps = 41/355 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIR---AF 62
            H R R          RN   +++ ++F E  F+ I +  +  S      E        F
Sbjct: 122 AHLRARTNTYGAVFRVRNACSAAVHQFFQERGFLWIHTPIITASDCEGAGEMFGVTNLDF 181

Query: 63  S----TEL----IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                TE       +D   KP +L  S +    +++A     ++ F   +R        H
Sbjct: 182 KNLPLTESKEVDFSRDFFGKPTFLTVSGQLQA-EIMALAFGNVYTFGPTFRAENSNTSRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M    + ++   +   +K             E     + + 
Sbjct: 241 LAEFWMIEPEMAFCDLEGNMDLAEDFLKYIFKFVLEKCPED--------MEFFNKRIDKT 292

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               A+  +    +     D   L  +A +   +     +W           +       
Sbjct: 293 VLETADNIINNQFERLTYTDAIKLLEKADK---KFEFPVSWGLDLQSEHERYLAE-DLFK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP    A       D +  +          L     E++   ++  R +    
Sbjct: 349 KPVIVTDYPKDIKAFYMRLGDDGKTVRAM------DVLAPKIGEIIGGSQREERLDVLEN 402

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             K++   +  +   +L          +G  +GF+R+V  +TG  NI +VI  P 
Sbjct: 403 RMKEMDVNSEEL-WWYLELRKYGTVPHAGFGLGFERVVQFMTGMANIRDVIPFPR 456


>gi|255535963|ref|YP_003096334.1| asparaginyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342159|gb|ACU08272.1| Asparaginyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 498

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/367 (14%), Positives = 123/367 (33%), Gaps = 43/367 (11%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R+ +  ++ ++F +NQF  +++  +  +       +  FS   
Sbjct: 138 QAHLRFRTNLFGSVFRVRSAVSFAIHQFFNKNQFFYMNTPIITGADAEGAGEM--FSVTN 195

Query: 67  IIQDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
              + +           +  +     L  S + + +  +     +++ F   +R      
Sbjct: 196 FDINDLPKDENGEIDYSQDFFGKKTNLTVSGQLNVETAMMG-LGRVYTFGPTFRAENSNT 254

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF M+E   A  + E  +    + ++       +            F+E +    
Sbjct: 255 TRHLAEFWMVEPEVAFNNLEDNIDLAEDFLKYVIGYVLENCKDDLEFLDKRFAEEQKQKP 314

Query: 171 AEAFARYANIDLG--------TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
            +  A    I+            +   +  D      + ++   +   ++  +D+ S   
Sbjct: 315 EKDRASEGLIEKLQNVIQKRFKRVSYTEAIDILKNSKENKKGKFQFPIEEWGADLQSEHE 374

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +E +       +L  YP    A       D +     ++    I       E++   
Sbjct: 375 RFLVEKHFES--PVVLFDYPKEIKAFYMKLNEDGKTVAAMDVLFPGI------GEIIGGS 426

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           ++  +F+   ++ K +  + + +   +L          +G  +G +RLV+ VTG  NI +
Sbjct: 427 QREDKFDVLTEKMKAMNVDEHEL-WWYLDTRKFGSVPHAGFGLGLERLVLFVTGMTNIRD 485

Query: 342 VIWTPFS 348
           VI  P +
Sbjct: 486 VIPFPRT 492


>gi|238749748|ref|ZP_04611253.1| Asparaginyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238712403|gb|EEQ04616.1| Asparaginyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 463

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 113/363 (31%), Gaps = 55/363 (15%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQY----------------- 51
            H R R  L       R+ +  ++  +F EN +  + +  +                   
Sbjct: 122 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 181

Query: 52  --SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              P  +T    FS     +D   K  +L  S + + +    A   K++ F   +R    
Sbjct: 182 ENIPRTDTGAVDFS-----EDFFGKEAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENS 235

Query: 110 GC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A  S + +      +++   +       + +  +   F+E    
Sbjct: 236 NTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAV----LNERADDMKFFAERVDK 291

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +   R+   D           D          +G +  +D +W    S      +  
Sbjct: 292 DAVDRLQRFVTSDFAQV-------DYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAE 344

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                   +   YP    A       D +             L     E++   ++  R 
Sbjct: 345 QHFKAPVVVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERL 397

Query: 289 E-KEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +  + +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  
Sbjct: 398 DVLDARLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPF 454

Query: 346 PFS 348
           P +
Sbjct: 455 PRT 457


>gi|209559094|ref|YP_002285566.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209540295|gb|ACI60871.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 448

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 120/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  KP +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGKPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +     ++        +         +  + D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKR--YITEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             TL    + D  + Y   +             D F       I    G+   T +  YP
Sbjct: 294 AITLLQEHEADEDIDYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDNYDALVAKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEYD-FYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|238789294|ref|ZP_04633081.1| Asparaginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238722626|gb|EEQ14279.1| Asparaginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 466

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 112/358 (31%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDTGAIDFSEDFFGKEAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  S + +      +++   +       + +  +   F+E       + 
Sbjct: 244 LAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAV----LNERADDMKFFAERVDKDAVDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D          +G +  +D +W    S      +       
Sbjct: 300 LQRFVTSDFAQV-------DYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRT 460


>gi|288549447|ref|ZP_05967122.2| hypothetical protein ENTCAN_05502 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319123|gb|EFC58061.1| asparagine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 492

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 107/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R  L       R+ +  +L  +F E  +  + +  +  S       +        
Sbjct: 151 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGYFWVSTPLITASDTEGAGEMFRVSTLDM 210

Query: 60  -RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T     D+      K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 211 ENLPRTPEGKVDYDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 269

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A      +      +++   +   ++    +  +   F+E         
Sbjct: 270 LAEFWMLEPEVAFADLNDVAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDNDAIAR 325

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G +  +   W    S      +       
Sbjct: 326 LERFVSADFAQV-------DYTDAVAILEKCGEKFENPVYWGVDLSSEHERYLAEKHFKA 378

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 379 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 431

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +++     P D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 432 RMEEMGL--NPADYGWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 486


>gi|253990240|ref|YP_003041596.1| asparaginyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781690|emb|CAQ84853.1| asparaginyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 495

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 112/358 (31%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL-- 66
            H R R  L       R+ +  +L  +F EN +  + +  L  +   E     F      
Sbjct: 154 AHLRPRTNLIGAVARMRHTLAQALHRFFHENGYFWVSTP-LITAADTEGAGEMFRVSTLD 212

Query: 67  -------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          +D   +  +L  S + + +    A   K++ F   +R        
Sbjct: 213 LQNLPLTDKGEVDFNEDFFGREAFLTVSGQLNGEAYACA-LSKVYTFGPTFRAENSNTSR 271

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF MLE   A    +       N+++   + A ++    +  +   F+E     V  
Sbjct: 272 HLAEFWMLEPEVAFADLDDAASLAENMLKYVFKAALEE----RADDLQFFAERVDKDVIT 327

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              ++ N D         Q D        Q  G +  +   W    S      +      
Sbjct: 328 RLEKFINSDFA-------QIDYTDAIEILQNCGQKFENPVFWGVDLSSEHERYLAEKH-F 379

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               ++  YP    A       D +             L     E++   ++  R +   
Sbjct: 380 QAPVVVKNYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDMLD 433

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +++       D  +   L        SG  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 434 KRMEEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLVSYVTGVPNVRDVIPFPRT 489


>gi|324503664|gb|ADY41587.1| Aspartyl-tRNA synthetase [Ascaris suum]
          Length = 534

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 107/351 (30%), Gaps = 47/351 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               ++ +    R    +  F EI +  +  +  +E     F
Sbjct: 210 DTRLDNRVLDLRTPTSQAIFRIQDGVCELFRNTLKKRGFTEIHTPKIISAA-SEGGANVF 268

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                         YL  SP+   +  +AA  +K++     +R  +     H  EF  L+
Sbjct: 269 EVSYFKGSA-----YLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLD 323

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A + +   + + +  +        Q  F  +          E     E        D
Sbjct: 324 LEMAFKFHYHEVVETIGAMLIEIFKGLQANFQHEIETVCRQYPCEPFQFVEPALILKYPD 383

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++  + +  +D  S    + L + ++     +   ILD+Y
Sbjct: 384 ---------------AIKLLRENEVEIGDEDDLSTPVEKFLGKLVKEKYKTD-FYILDKY 427

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIE--QRHRFEKEMQEKKKI 298
           P           P + +++  ++++    E+ +    + DP    QR +F     EK + 
Sbjct: 428 PLAVRPFYTMPDPNNSKYSNSYDMFMRGEEILSGAQRIHDPTLLTQRAKFHNIDLEKIRA 487

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                     ++       P  +G  +G +R+ ML  G  N+      P  
Sbjct: 488 ----------YVDAFRFGCPPHAGGGIGLERVTMLFLGLGNVRLASLFPRD 528


>gi|313887156|ref|ZP_07820852.1| asparagine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332300499|ref|YP_004442420.1| Asparaginyl-tRNA synthetase [Porphyromonas asaccharolytica DSM
           20707]
 gi|312923385|gb|EFR34198.1| asparagine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332177562|gb|AEE13252.1| Asparaginyl-tRNA synthetase [Porphyromonas asaccharolytica DSM
           20707]
          Length = 471

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 109/357 (30%), Gaps = 40/357 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       L  R+ +  ++  +F E  +  + +  +  S       +  F+   +
Sbjct: 127 AHLRPRTNTFAAVLRIRHNMAYAIHTFFHERGYFYLHTPIITSSDAEGAGQM--FTVTTL 184

Query: 68  IQDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             + +           K  +     L  S +    +L A     I+ F   +R       
Sbjct: 185 DMNKLPLAKDGSVDYSKDFFGKHTSLTVSGQL-EGELGAMALGGIYTFGPTFRAENSNTP 243

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E          +   + A              + +       
Sbjct: 244 RHLAEFWMVEPEVAFMDNEGNQDLAEAFTKHCLQWALDHCMDDLEFLAEHYDK------- 296

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E   R   +     +         +L  +A + G +      W    +      +     
Sbjct: 297 ELIERIRFVVERPFVRTTYTEGVAIL-EEAVRGGKKFEFPVYWGADLASEHERYLVEQH- 354

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
            N   I+  YP    A       D +  +  ++   +I       E    I++     +E
Sbjct: 355 YNAPVIMTDYPKEIKAFYMKQNDDGKTVRGMDVLFPHIGEIIGGSERETDIDKLTARAQE 414

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  K K  +  + +D             +G  +GF+RL++ VTG  NI +VI  P +
Sbjct: 415 VGIKDK--DLWWYLDTR----RYGSAPHAGFGLGFERLLLFVTGMTNIRDVIPFPRT 465


>gi|325847832|ref|ZP_08170054.1| asparagine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480850|gb|EGC83903.1| asparagine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 462

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/358 (17%), Positives = 115/358 (32%), Gaps = 43/358 (12%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
                R    R     R+ +  +L ++F E +FI +++  +  S       +   +T+ +
Sbjct: 119 PHLRVRTNTYRAVFRLRSKLAYALHKFFQEREFIYLNAPLITASDTEGAGEMFQVTTQNL 178

Query: 68  IQDHIRKPL-------------YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + ++ K               YL  S +   +    A    I+ F   +R  E     H
Sbjct: 179 EKPNLDKDGKVDYSKDFFGKKSYLTVSGQLEAEDYALA-LSNIYTFGPTFRAEESNTPRH 237

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A   Y   M     +++   E                F+E    T+ E 
Sbjct: 238 AAEFWMLEPELAFADYNVCMDVAEEMMKYMIEYV----LENCKDEIEFFNERIDDTLIER 293

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             +  N                    + + A +   +   W           +   +   
Sbjct: 294 LTKVKNAKFARITYTD-------AIEKLKNADVDFEYPVEWGIDLQTEHERYLSEKIVDG 346

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +    F        L  A  EL+   ++  R+++ ++
Sbjct: 347 PV-FVTDYPKDIKAFYMRRNNDGKTVAAF------DMLVPAVGELIGGSQREERYDELVK 399

Query: 294 EKKKIYNETYPIDE--DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +        IDE  ++L          SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 400 SMEDNGL---KIDEYQNYLDLRKYGTVVHSGYGLGFERAVMYLTGMKNIRDVIPYPRT 454


>gi|324994044|gb|EGC25963.1| asparagine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324994634|gb|EGC26547.1| asparagine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327490037|gb|EGF21826.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 448

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 121/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +        +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPAAIKAFYMKPVEGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  ++  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMNELGMDTTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|324991677|gb|EGC23610.1| asparagine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 448

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 121/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPAAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMNDLGMDTTEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|312143648|ref|YP_003995094.1| asparaginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904299|gb|ADQ14740.1| asparaginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 463

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 114/360 (31%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-FL----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++ +YF    F  I +  +          I  F    +
Sbjct: 122 AHLRARTNTFGVVNRFRSKMSYAVHDYFYNKDFKYIHTPIITSGDAEGAGEI--FKVTTL 179

Query: 68  IQDHI----------RKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             + +           +  +     L  S +    +L+A+    ++ F   +R  +    
Sbjct: 180 DFEKLAKAENGEIDYSQDFFGKETGLTVSGQLEA-ELMASALGDVYTFGPTFRAEKSNTS 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A  + +++M    + I+     A  +         + F++       
Sbjct: 239 RHASEFWMIEPEMAFCNLDEMMVLIEDFIKKLFTFALNEAAE----EMDFFNKQIDKGRR 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E  A     D                    +++G+   +  +W           +     
Sbjct: 295 EIIANIIEADFAKITYTE-------AIDILEKSGVDFEYPVSWGIDLQSEHERFLTEKFF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +   YP    A       D +     +     +       E++   ++  R+E  
Sbjct: 348 KKPIMVK-DYPKDIKAFYMRQNDDNKTVAAVDCLVPGV------GEIIGGSQREERYE-- 398

Query: 292 MQEKKKIYNETYPIDE--DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K ++      +DE   FL          SG  +GF+RL+M ++G  NI ++I  P +
Sbjct: 399 -KLKSRMQELKMDLDEYQWFLEIRKYGTVPHSGFGLGFERLLMYLSGMQNIRDIIPFPRT 457


>gi|169832633|ref|YP_001694947.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|168995135|gb|ACA35747.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 447

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/347 (17%), Positives = 119/347 (34%), Gaps = 31/347 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                 +E     +AE F R    D 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLD-RAPQALETLERDTELLKRYIAEPFKRITY-DQ 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 293 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 339

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A   A        P   +R  +   ++       E++    +   ++  + +  ++  + 
Sbjct: 340 AAIKAFYMK--PVPGNLER--VLCADLLAPEGYGEIIGGSMREEDYDALVAKMDELGMDR 395

Query: 303 YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               E +L           G  +G +R+V    G  +I E I  P  
Sbjct: 396 TEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIREAIPFPRM 441


>gi|261492017|ref|ZP_05988592.1| asparagine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494570|ref|ZP_05991052.1| asparagine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309761|gb|EEY10982.1| asparagine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312300|gb|EEY13428.1| asparagine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 467

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 106/356 (29%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPVITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRGENGKVDFNQDFFGKESFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A        K   ++++   +    +             + E I+  E 
Sbjct: 245 LAEFWMMEPEVAFADLNDNAKLAEDMLKYVFKAVLAERKDDMEFFVKHVDK-EAISRLEN 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F                Q D         ++G       +W    S      +      +
Sbjct: 304 F----------INSPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEHFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   Q
Sbjct: 354 PVVVKS-YPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDQ 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMNEMGL--NPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIRDVIPFPR 460


>gi|238763361|ref|ZP_04624325.1| Asparaginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698460|gb|EEP91213.1| Asparaginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 466

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 115/363 (31%), Gaps = 55/363 (15%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---------------- 52
            H R R  L       R+ +  ++  +F EN +  + +  +  S                
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 53  ---PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              P  +T    FS     +D   K  +L  S + + +   +A   K++ F   +R    
Sbjct: 185 ENLPRTDTGAVDFS-----EDFFGKEAFLTVSGQLNGETYASA-LSKVYTFGPTFRAENS 238

Query: 110 GC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A  S + +      +++   +       + +  +   F+E    
Sbjct: 239 NTSRHLAEFWMVEPEVAFASLDDVAGLAEKMLKYVFQAV----LNERADDMKFFAERVDK 294

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +   R+   D           D          +G +  +D +W    S      +  
Sbjct: 295 DAVDRLQRFVTSDFAQV-------DYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAE 347

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                   +   YP    A       D +             L     E++   ++  R 
Sbjct: 348 KHFKAPVVVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERL 400

Query: 289 E-KEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +  + +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  
Sbjct: 401 DVLDARLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPF 457

Query: 346 PFS 348
           P +
Sbjct: 458 PRT 460


>gi|94987146|ref|YP_595079.1| asparaginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|123385048|sp|Q1MQG9|SYN_LAWIP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94731395|emb|CAJ54758.1| Aspartyl/asparaginyl-tRNA synthetases [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 455

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/349 (16%), Positives = 104/349 (29%), Gaps = 34/349 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRA 61
            H R R          R     ++  YF +  F  I +  L  S      E    T   +
Sbjct: 121 AHLRVRTNKYGAIFRIRAEAAQAIHNYFYKKGFYYIHTPILTGSDCEGAGEMFRVTTAHS 180

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
            +      +   K   L  S +    + LA G  K++ F   +R        H  EF M+
Sbjct: 181 SNDSQSSDNFFGKECSLTVSGQLEA-ECLAMGLGKVYTFGPTFRAENSNTPRHAAEFWMV 239

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A    +    +    + C       +      +  + + +P  I   E       I
Sbjct: 240 EPEMAFADLQDN-MNLAEELTCEVIRKVLQCHIDDIMLLDKYVQPGLIKALENIIAKPFI 298

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                     +   H        +        T+         + +      +   I   
Sbjct: 299 ----------RCSYHDAITILLSSHKDFEFPVTFGLDLQSEHEKYLTEEYFKHPVIIF-D 347

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP    A       D       +L    I       EL+   ++  R +  +   +++  
Sbjct: 348 YPKEIKAFYMRQNDDEETVAAMDLLVPRI------GELIGGSQREERLDNLLSRIRELGQ 401

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          +G  +GF+RLVML+TG +NI +V+  P +
Sbjct: 402 SIEEY-WWYLDLRRFGTVPHAGFGLGFERLVMLLTGVSNIRDVLPFPRT 449


>gi|331092530|ref|ZP_08341352.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330400751|gb|EGG80354.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 463

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 102/358 (28%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++I  ++ ++F E  F+ + +  +  S       +  F    +
Sbjct: 122 AHLRPRTNTFQAVFRVRSLIAYAIHQFFQERGFVYVHTPIITGSDCEGAGEM--FRVTTL 179

Query: 68  ---------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
                           QD   K   L  S + + +    A    I+ F   +R       
Sbjct: 180 DMENLPKNEDGTVDYSQDFFNKETSLTVSGQLNGETYAQA-FRNIYTFGPTFRAENSNTT 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M     +++                  N F+      + 
Sbjct: 239 RHAAEFWMVEPEIAFADLDDNMMLAEAMLKYIINYV----LENAPEEMNFFNSFVDKGLL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     AN +                    ++   +  +  +W           +     
Sbjct: 295 DRLHNVANSEFARVTYTE-------AIELLEKNNDKFDYKVSWGADLQTEHERYLTEE-V 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                 +  YP    A       D +     +     I E+        D  +   R  +
Sbjct: 347 FKRPVFVTDYPKDIKAFYMKMNDDNKTVAAVDCLVPGIGEIIGGSQREDDYEKLLARMNE 406

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  +  E Y    D         + +G  +GF+R VM +TG +NI +V+  P +
Sbjct: 407 M-----GLKPEEYQFYLDLRK--YGSTRHAGFGLGFERCVMYLTGMSNIRDVLPFPRT 457


>gi|308174027|ref|YP_003920732.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307606891|emb|CBI43262.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328552847|gb|AEB23339.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912355|gb|AEB63951.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 430

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 106/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F+++D   L   +P         
Sbjct: 114 MDHRHLWLRSK--RQHAIMKIRNEIIRATYEFFNKEGFVKVDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFATKYFDEDAFLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E+ ++   N +    +   +      N      S+ E I        Y    
Sbjct: 224 PEMAFVEFEENLEVQENYVAYIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITY---- 279

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++ G     D  W D F       I  +   +    +  Y
Sbjct: 280 -------------DKAIEFLKEKGFD---DIEWGDDFGAPHETAIAESY--DKPVFITHY 321

Query: 242 PAPESALANIYPADPR----FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           P            D                   +    + + D      R ++       
Sbjct: 322 PTSLKPFYMQPAKDRDDVVLCADLIAPEGYGEIIG-GSERVHDMDLLEERLKE-----HG 375

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + ++ Y    +           SG  +G +R V  ++GA ++ E I  P  
Sbjct: 376 LDSDAYKWYAELRQ--YGSVPHSGFGLGLERTVAWISGAPHVRETIPFPRL 424


>gi|262282871|ref|ZP_06060638.1| asparaginyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262261123|gb|EEY79822.1| asparaginyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 448

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 121/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPAAIKAFYMKPVPGNPNRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMNDLGMDTTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|329894761|ref|ZP_08270562.1| Lysyl-tRNA synthetase-related protein [gamma proteobacterium
           IMCC3088]
 gi|328922750|gb|EGG30083.1| Lysyl-tRNA synthetase-related protein [gamma proteobacterium
           IMCC3088]
          Length = 297

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 85/319 (26%), Positives = 138/319 (43%), Gaps = 30/319 (9%)

Query: 28  IQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCK 87
           ++S++R++F E Q +E+ +            +     E I    + +  YLQTSPEF+ K
Sbjct: 1   MRSTVRDFFAERQVLEVAAPV-----AGARAVTDPQLESIPFRVMNETRYLQTSPEFALK 55

Query: 88  KLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
           +LLA G   ++     +RN EQG  H PEFTMLEWYR   ++  LM              
Sbjct: 56  RLLAQGSGDVYSLGTVFRNDEQGRWHSPEFTMLEWYRLGFNHHDLM-------------- 101

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
             ++ S  +         E ++  E + +   +D               L  +AQ     
Sbjct: 102 -SEVESLVHSVWPSMPVLERLSHRELYEQILGVD-------SLSASVEQLKDRAQNLQEC 153

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-FTKRFELYA 266
              + +       + +  IEP    +    +  +P  ++ALA +  ++ R    RFEL  
Sbjct: 154 PFTETSRVFWLDLLWVIGIEP-ALQDRACFVYDFPIEQAALARLGDSEGRAVAHRFELVI 212

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMG 325
             +EL N   EL D  EQ  RFE + Q ++         DE  L  L   +P  +G+A+G
Sbjct: 213 QGVELANGFWELTDADEQHGRFEADNQHRECSGQPRVKPDERLLQALRAGLPDCAGVALG 272

Query: 326 FDRLVMLVTGANNINEVIW 344
           FDRLV L +G   +++ + 
Sbjct: 273 FDRLVALSSGYRQVSDALA 291


>gi|153856063|ref|ZP_01996954.1| hypothetical protein DORLON_02982 [Dorea longicatena DSM 13814]
 gi|149751725|gb|EDM61656.1| hypothetical protein DORLON_02982 [Dorea longicatena DSM 13814]
          Length = 467

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/339 (14%), Positives = 113/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  +  + R++    +F EI +  +         +I          ++ 
Sbjct: 159 RNIRERAKFRIQEGLTRAFRDFLYSQEFTEIHTPKIGAKGAEGGANI-------FKLEYF 211

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P  L  SP+F  +  +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 212 HRPAVLAQSPQFYKQM-MVGVFDRVFETAPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 270

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +          A    +K ++ +                    +   ++L      P  
Sbjct: 271 DIMAMETGFLQYAMELLKKDYARE-------------------LKVLGVELPDVSQIPAV 311

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +  + A++   ++ +          ++    +   G +    +  YP+ +     +
Sbjct: 312 KFADIKEIVAEKYNHKMRNPFDLEPEEEVLIGRYAKEEWGSD-FVFVTHYPSKKRPFYAM 370

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               D R+T  F+L    +E+      + D      +        + +  E     E +L
Sbjct: 371 DDPEDSRYTLSFDLLFRGLEITTGGQRIHDYKMLTDKI-----AARGMTEEGM---EQYL 422

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           A     MP   G+ +G +RL M + G +N+ E    P  
Sbjct: 423 ATFKHGMPPHGGLGIGLERLTMQLLGEDNVRETTLFPRD 461


>gi|238792377|ref|ZP_04636011.1| Asparaginyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728303|gb|EEQ19823.1| Asparaginyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 466

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 115/363 (31%), Gaps = 55/363 (15%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---------------- 52
            H R R  L       R+ +  ++  +F EN +  + +  +  S                
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 53  ---PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              P  +T    FS     +D   K  +L  S + + +   +A   K++ F   +R    
Sbjct: 185 ENLPRTDTGAVDFS-----EDFFGKEAFLTVSGQLNGETYASA-LSKVYTFGPTFRAENS 238

Query: 110 GC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A  S + +      +++   +       + +  +   F+E    
Sbjct: 239 NTSRHLAEFWMVEPEVAFASLDDVAALAEKMLKYVFQAV----LNERADDMKFFAERVDK 294

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +   R+   D           D          +G +  +D +W    S      +  
Sbjct: 295 DAVDRLQRFVTSDFAQV-------DYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAE 347

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                   +   YP    A       D +             L     E++   ++  R 
Sbjct: 348 KHFKAPVVVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERL 400

Query: 289 E-KEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +  + +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  
Sbjct: 401 DVLDARLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPF 457

Query: 346 PFS 348
           P +
Sbjct: 458 PRT 460


>gi|218439606|ref|YP_002377935.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218172334|gb|ACK71067.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 463

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       +  RN   +++  +F E  F+ + +  +  S       +  F+   +
Sbjct: 122 AHLRSRTNTLGAVMRVRNACANAIHRFFQERGFLWVHTPIITASDCEGAGEL--FTVTSL 179

Query: 68  IQDHI---------------RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             + +                K  YL  S +    +++A   + ++ F   +R       
Sbjct: 180 DFNKLPRNKQQEIDFSQDFFGKRAYLTVSGQLEA-EIMALAFQNVYTFGPTFRAENSNTS 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A              ++   +            +   F++    TV 
Sbjct: 239 RHLAEFWMVEPEMAFCDLNGDQDLAEAFLKYIFKFV----LDHCQEDMEFFNQRIDNTVL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N + G                  ++A  +  +   W           +   L 
Sbjct: 295 ETAENIINNEFGRITYTE-------AIALLEKADRQFEYPVEWGVDLQSEHERYLAEELF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 348 KKPLIVS-NYPKDIKAFYMRLNDDDKTVAAM------DVLAPKIGEIIGGSQREERLDVL 400

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                ++      +   +L          +G  +GF+R+V  +TG  NI +VI  P +
Sbjct: 401 ENRIAQMGLPPEDL-WWYLDLRRFGTVPHAGFGLGFERVVQFMTGMGNIRDVIPFPRT 457


>gi|210617003|ref|ZP_03291338.1| hypothetical protein CLONEX_03560 [Clostridium nexile DSM 1787]
 gi|210149526|gb|EEA80535.1| hypothetical protein CLONEX_03560 [Clostridium nexile DSM 1787]
          Length = 463

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 108/357 (30%), Gaps = 45/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI- 67
           H R R          R++I  ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFQAVFRVRSLIAYAIHQFFQERGFVYVHTPIITGSDCEGAGEM--FRVTTLD 180

Query: 68  --------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                          QD   K   L  S + + +    A    I+ F   +R        
Sbjct: 181 MENIPKNEDGTVDYSQDFFNKETSLTVSGQLNGETYAQA-FRNIYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +  M     +++                  N F+      + +
Sbjct: 240 HAAEFWMVEPEIAFADLDDNMMLAEAMLKYIINYV----LENAPEEMNFFNSFVDKGLLD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                A+ D                    ++   +  +  +W           +   +  
Sbjct: 296 RLHNVASSDFARVTYTE-------AIEILEKNNDKFDYKVSWGADLQTEHERYLTEEVYK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
                +  YP    A       D +     +     I       E++   ++   +EK +
Sbjct: 349 RPV-FVTDYPKDIKAFYMKMNDDNKTVAAVDCLVPGI------GEIIGGSQREDNYEKLL 401

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               ++  +     + +L        + +G  +GF+R VM +TG +NI +V+  P +
Sbjct: 402 ARMNEMGLKPEEY-QFYLDLRKYGSTRHAGFGLGFERCVMYLTGMSNIRDVLPFPRT 457


>gi|149183168|ref|ZP_01861616.1| asparaginyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148849103|gb|EDL63305.1| asparaginyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 371

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 107/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    R+   +  RN I  +  E+F +  F+++D   L   +P   + +  F
Sbjct: 55  MDNRHLWLRSR--RQHAVMKVRNEIIRATYEFFNKEGFVKVDPPILTGSAPEGTSEL--F 110

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 111 HTK-----YFEEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 164

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  +K     +    +   +                      +        D
Sbjct: 165 PEMAFYEHEDSLKVQEEYVSHVVQSVLENC--------------------KLDLERLGRD 204

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                +      R       +    +   D  W D F       I  +   +    +  Y
Sbjct: 205 TSKLENIKAPFPRITYDEAVKFLKEKGFDDIEWGDDFGAPHETAIAESY--DKPVFITHY 262

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P         +L A     E+    + L D      R E+       +
Sbjct: 263 PTSLKPFYMQPDPNREDVVLCADLIAPEGYGEIIGGSERLHDHEILSQRIEE-----HDL 317

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y   + +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 318 DPEAY---KWYLELRKYGSVPHSGFGLGLERTVAWISGVEHVRETIPFPRL 365


>gi|212697091|ref|ZP_03305219.1| hypothetical protein ANHYDRO_01656 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675866|gb|EEB35473.1| hypothetical protein ANHYDRO_01656 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 462

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/358 (17%), Positives = 115/358 (32%), Gaps = 43/358 (12%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
                R    R     R+ +  +L ++F E +FI +++  +  S       +   +T+ +
Sbjct: 119 PHLRVRTNTYRAVFRLRSKLAYALHKFFQEREFIYLNAPLITASDTEGAGEMFQVTTQNL 178

Query: 68  IQDHIRKPL-------------YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + ++ K               YL  S +   +    A    I+ F   +R  E     H
Sbjct: 179 EKPNLDKDGKVNYSKDFFGKKSYLTVSGQLEAEDYALA-LSNIYTFGPTFRAEESNTPRH 237

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A   Y   M     +++   E                F+E    T+ E 
Sbjct: 238 AAEFWMLEPELAFADYNVCMDVAEEMMKYMIEYV----LENCKDEIEFFNERIDDTLIER 293

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             +  N                    + + A +   +   W           +   +   
Sbjct: 294 LTKVKNAKFARITYTD-------AIEKLKNADVDFEYPVEWGIDLQTEHERYLSEKIVDG 346

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +    F        L  A  EL+   ++  R+++ ++
Sbjct: 347 PV-FVTDYPKDIKAFYMRRNNDGKTVAAF------DMLVPAVGELIGGSQREERYDELVK 399

Query: 294 EKKKIYNETYPIDE--DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +        IDE  ++L          SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 400 SMEDNGL---KIDEYQNYLDLRKYGTVVHSGYGLGFERAVMYLTGMKNIRDVIPYPRT 454


>gi|212539668|ref|XP_002149989.1| aspartyl-tRNA synthetase, cytoplasmic [Penicillium marneffei ATCC
           18224]
 gi|210067288|gb|EEA21380.1| aspartyl-tRNA synthetase, cytoplasmic [Penicillium marneffei ATCC
           18224]
          Length = 951

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 117/330 (35%), Gaps = 27/330 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ + +  R    E  FIEI +  LQ S   E+    F       ++  +P +L
Sbjct: 284 QAIFRLQSAVGNLWRAALDERGFIEIHTPKLQGSA-TESGASVFQ-----LNYFGRPAFL 337

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+ + +  +A+  ++++     +R        H  E+T L+   A E +   M + +
Sbjct: 338 AQSPQLAKQMAIASDFDRVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEMLETI 397

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +           +  +          E + +AE        +    L++         
Sbjct: 398 DAVLRNIITGIYSKYRREVEAVKHQFPSEDVVLAEKTPVIPFQEAVALLNDSGWRGEDGE 457

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
            + A +  +    +    ++        ++   G +   I+D++P           P D 
Sbjct: 458 LIPADE-DLHTRDEIRLGEL--------VKEKYGTD-YYIIDKFPVSARPFYTMPDPYDS 507

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
           R+T  F+++    E+ +    + DP        +E  +K  I        ED+L      
Sbjct: 508 RYTNSFDMFVRGQEIVSGGQRIHDPTML-----EENMKKVGIDPSAM---EDYLEGFRWG 559

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            P  +G  +G +R VML+    NI      
Sbjct: 560 APPHAGAGVGLERFVMLLLKLGNIRLASLF 589


>gi|197284659|ref|YP_002150531.1| asparaginyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227356864|ref|ZP_03841243.1| asparaginyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|194682146|emb|CAR41761.1| asparaginyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227162934|gb|EEI47879.1| asparaginyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 466

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/359 (17%), Positives = 106/359 (29%), Gaps = 47/359 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R R  L       R+ +  +L  +F E  F  + +  L  +   E     F    + 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTP-LITAADTEGAGEMFRVSTLD 183

Query: 69  QD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
            +                  +  +L  S + + +   +A   K++ F   +R        
Sbjct: 184 MNNLPRTDKGEVDFSEDFFGREAFLTVSGQLNGETYASA-LSKVYTFGPTFRAENSNTSR 242

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A      +      +++ A      +             + E IT  E
Sbjct: 243 HLAEFWMVEPEVAFADLNDIAGLAEKMLKYAFSAVLAERRDDMEFFAQRVDK-EAITRLE 301

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
            F             +  Q D        +  G +  +   W    S      +      
Sbjct: 302 HF----------IASDFAQIDYTDAITVLENCGQKFENPVYWGVDLSSEHERYLAEKHFK 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-E 291
               +   YP    A       D +             L     E++   ++  R E  +
Sbjct: 352 APVVVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLEMFD 404

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +  +   N+    D  +   L        SG  +GF+RLV  VTG  NI EVI  P +
Sbjct: 405 KRLAEMGMNKE---DYWWYRDLRRYGTVPHSGFGLGFERLVAYVTGVTNIREVIPFPRT 460


>gi|116332661|ref|YP_802378.1| tRNA synthetase class II (D, K and N) [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116127528|gb|ABJ77620.1| tRNA synthetase class II (D, K and N) [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 315

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 92/328 (28%), Positives = 153/328 (46%), Gaps = 25/328 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L+KR    S LR++F +  ++E+D+  L+  P  E ++  F      +   ++  YL 
Sbjct: 7   EVLIKRAQFLSVLRKFFEKKNYLEMDTPCLKAVPSMEPYLDPFLVRSPSR---KEKGYLI 63

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           TSPE+S K++L+ G EKI+   H +R+  E    H  EF MLE+Y    S E LM  C  
Sbjct: 64  TSPEYSLKEILSKGLEKIYEITHTFRSGEEGSPFHSAEFLMLEFYTVGISLEDLMNFCTE 123

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++                      ++   I+V E+  +YA+  +  +  +    +R L  
Sbjct: 124 LLEVLDCEF--------QAFGFDRNKVRKISVEESLRKYAHCGISKSELDRVILERRLSE 175

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           + A++            D F  + +  +E +L       L  YP   +AL      +  F
Sbjct: 176 IPAEKRAYE--------DSFFIVFLNLVEAHLPKE-FVFLYDYPPELAAL---SKIESGF 223

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
            KRFELY  ++EL NA +EL DP+EQ  RF  E   +K +  E + +D      L   +P
Sbjct: 224 AKRFELYYGSLELGNAFEELTDPVEQISRFCHEQDLRKNLGKEVFSVDPGLERALREGIP 283

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWT 345
            S GI++G DRL++ + G +++ E+   
Sbjct: 284 DSCGISIGLDRLLLCILGGSSLREISPY 311


>gi|50913904|ref|YP_059876.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|59798489|sp|Q5XD20|SYN_STRP6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|50902978|gb|AAT86693.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 448

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  KP +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGKPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +     ++        +         +  + D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKR--YITEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             TL    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AITLLQEHEADEDTDYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDNYDALVAKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEYD-FYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|293401335|ref|ZP_06645479.1| asparagine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305461|gb|EFE46706.1| asparagine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 461

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 109/351 (31%), Gaps = 42/351 (11%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+++  ++ E+F    F+ + +  +  +          F+     
Sbjct: 130 HLRPRANSFYAIFRLRSVLSMAIHEFFQNQGFVYVHTPVITGNDAEGAGE--TFTVTTRE 187

Query: 69  QDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
                +  +     L  S +   +    A    ++ F   +R        H  EF M+E 
Sbjct: 188 DQKYEEDFFGKHASLTVSGQLHVESFAMA-FRDVYTFGPTFRAENSNTTRHASEFWMIEP 246

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    E  M    ++++   +   +                  +   E   R   +  
Sbjct: 247 EIAFADLEDDMDLIEDMVKYCIDYVLENAPEEMKF-------FNSMIDKECIERITKVRN 299

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTILDRY 241
                        LL    ++A ++  ++   W           +     +N    L  Y
Sbjct: 300 SEFKRMTYTEAIELL----KKADVKFENNKIEWGMDLQSEHERYLCEK-VVNGPVFLIDY 354

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P    A       D +     +L    +       EL+   ++  R++      K++  E
Sbjct: 355 PKDIKAFYMRVNEDNKTVAACDLLVPGV------GELVGGSQREERYDVLEARMKEMGME 408

Query: 302 T----YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           T    + +D           + +G  +GFDR++M +TG  NI +V   P +
Sbjct: 409 TDSLQWYMDLR----RYGGCKHAGFGLGFDRMLMYLTGMQNIRDVEPFPRT 455


>gi|157375499|ref|YP_001474099.1| asparaginyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189083481|sp|A8FVU8|SYN_SHESH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|157317873|gb|ABV36971.1| asparaginyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 466

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 110/357 (30%), Gaps = 45/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       RN +  ++  ++ E  FI + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNIIGAVARVRNSLSQAIHRFYHEQGFIWVSTPLITASDAEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +   +A   K++ F   +R        H
Sbjct: 185 ENLPRNDEGKVDYSEDFFGKESFLTVSGQLNAETYASA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + +      +++   +   ++    +  +   F++    TV + 
Sbjct: 244 LAEFWMVEPEVAFADLDDVAGLAEQMLKFCFKAVLEE----RRDDLEFFAQRVDKTVIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + + D           D        +  G +  +   W           +       
Sbjct: 300 LESFVSSDFAQV-------DYTDAVEILKSCGKKFEYPVEWGIDLQSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R E+  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDARLEEMN 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             K+         D  +   +        SG  +GF+RLV  VTG +NI +VI  P 
Sbjct: 412 LSKE---------DYWWYRDMRRYGTVPHSGFGLGFERLVSYVTGVSNIRDVIPFPR 459


>gi|167771370|ref|ZP_02443423.1| hypothetical protein ANACOL_02736 [Anaerotruncus colihominis DSM
           17241]
 gi|167666010|gb|EDS10140.1| hypothetical protein ANACOL_02736 [Anaerotruncus colihominis DSM
           17241]
          Length = 516

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 108/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRA 61
            H R R          R++   ++  +F E  F+   +  +  S      E    T +  
Sbjct: 175 AHLRPRTNTFEAVFRVRSVAAYAIHRFFNERGFVYAHTPLITGSDCEGAGEMFRVTTLDP 234

Query: 62  FSTELIIQDHIR--KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
            +  L     +   +  +     L  S +    + +A    KI+ F   +R        H
Sbjct: 235 KNPPLTEDGAVDFAQDFFGKATGLTVSGQL-EGECMAMAFGKIYTFGPTFRAENSNTARH 293

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M+   ++I+                    F+      + E 
Sbjct: 294 AAEFWMIEPEIAFADLADNMELAEDMIKYVLSYV----LEQCPQEMAFFNSFYDKGLIER 349

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                + D G                  ++A  +  +   W           +   +   
Sbjct: 350 LDSIISSDFGHITYTE-------AIEILEKAKDQFQYPVYWGCDLQTEHERYLTEQVMKR 402

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       E++   ++  R +  + 
Sbjct: 403 PV-FVTDYPKEIKAFYMRLNDDRKTVAAVDLLVPGI------GEIIGGSQREERLDVLLS 455

Query: 293 QEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   +        +L        + +G  +GF+RL+M +TG +NI +V+  P +
Sbjct: 456 RMGELGLDPADY--SWYLDLRRYGGTKHAGYGLGFERLIMYMTGISNIRDVLPFPRT 510


>gi|282855597|ref|ZP_06264912.1| asparagine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282586580|gb|EFB91833.1| asparagine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 435

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 114/349 (32%), Gaps = 41/349 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    R+   +  RN I  S R++F +  F+ +DS  L          +   
Sbjct: 118 LDTRHLWLRSS--RQNALMKIRNEIIWSWRKFFHDRGFMLMDSPILTGSIGEGADGL--- 172

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                  D+  +  YL  + +   +    A   K++CF   +R  +     H  EF MLE
Sbjct: 173 ----FELDYFDQKAYLAQTGQLYAEAAAMA-FGKVYCFGPTFRAEKSKTRRHLTEFWMLE 227

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    +  M+   +++    +                      +   E        D
Sbjct: 228 PEMAFYDNKMNMQLQEDLVVDTVKNV--------------------LAHCEKELAVLERD 267

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +         P  HL Y  A +    +  D  + D         +      +    ++ Y
Sbjct: 268 VEPLEKVVAGPFYHLDYRDAVKKLNELGSDIEFGDDLGADDETVLTRQY--DRPVFVENY 325

Query: 242 PAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P   ++      P D   T    +   ++       E++   ++   +++ +   K++  
Sbjct: 326 PKDAKAFYMKANPEDNGET----VVCSDLLAPEGYGEIIGGSQREEDYDRLLNRMKELKM 381

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                D  +L          SG  +G +R +  + G  +I EVI  P +
Sbjct: 382 NPADYDW-YLDLRKFGSVPHSGFGIGLERTITWICGLPHIREVIPFPRT 429


>gi|315186351|gb|EFU20112.1| asparaginyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 482

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 97/353 (27%), Gaps = 42/353 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       +  RN +   +  +F E  F+ + +  +          +  F    +
Sbjct: 148 AHLRPRTNTIGAVMRVRNTLAWEIHRFFQERGFLYVHTPIITTGDAEGAGAL--FRVTTL 205

Query: 68  IQDH--------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFT 118
             D            P +L  S +   +    A    ++ F   +R        H  EF 
Sbjct: 206 PPDAPYDPTEDFFGAPAFLTVSGQLEAEAYALA-FVNVYTFGPTFRAENSHTPRHLAEFW 264

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           M+E   A    E  M      I    E   ++              PE +   E +    
Sbjct: 265 MVEPEMAFCDLEGDMHLAEEFITHLLEAVLERH-------------PEEMAFFEQWIAPG 311

Query: 179 NIDLGTTLDNPDQP--DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
             D    + N          +    ++A         W           +   L      
Sbjct: 312 LTDQLEAVVNTPFTHMTYTEVIEHLKKAPASFTFPPEWGMDLQTEHERYLTEELVKGPV- 370

Query: 237 ILDRYPAPESALANIYPADPRFT-KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           I+  YP    A       D R       L     E+        D      R ++     
Sbjct: 371 IVTDYPKEIKAFYMKQNPDGRTVRAMDVLVPRLGEIIGGSQREDDYERLLARMQELGMRI 430

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +      + +D             +G  +GFDRLV  VTG  NI +VI  P +
Sbjct: 431 EA---YQWYLDLR----RYGGAPHAGFGLGFDRLVQYVTGMQNIRDVIPFPRT 476


>gi|324503201|gb|ADY41394.1| Aspartyl-tRNA synthetase [Ascaris suum]
          Length = 509

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 107/351 (30%), Gaps = 47/351 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               ++ +    R    +  F EI +  +  +  +E     F
Sbjct: 185 DTRLDNRVLDLRTPTSQAIFRIQDGVCELFRNTLKKRGFTEIHTPKIISAA-SEGGANVF 243

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                         YL  SP+   +  +AA  +K++     +R  +     H  EF  L+
Sbjct: 244 EVSYFKGSA-----YLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLD 298

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A + +   + + +  +        Q  F  +          E     E        D
Sbjct: 299 LEMAFKFHYHEVVETIGAMLIEIFKGLQANFQHEIETVCRQYPCEPFQFVEPALILKYPD 358

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++  + +  +D  S    + L + ++     +   ILD+Y
Sbjct: 359 ---------------AIKLLRENEVEIGDEDDLSTPVEKFLGKLVKEKYKTD-FYILDKY 402

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIE--QRHRFEKEMQEKKKI 298
           P           P + +++  ++++    E+ +    + DP    QR +F     EK + 
Sbjct: 403 PLAVRPFYTMPDPNNSKYSNSYDMFMRGEEILSGAQRIHDPTLLTQRAKFHNIDLEKIRA 462

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                     ++       P  +G  +G +R+ ML  G  N+      P  
Sbjct: 463 ----------YVDAFRFGCPPHAGGGIGLERVTMLFLGLGNVRLASLFPRD 503


>gi|315640659|ref|ZP_07895764.1| asparagine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483598|gb|EFU74089.1| asparagine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 432

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 111/349 (31%), Gaps = 41/349 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN +  +  E+F ++ F++ID   L   +P         
Sbjct: 115 MDHRHLWLRSS--RQHAIMQIRNELIRATYEFFNKHHFVKIDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTDLFETNYFDQKAYLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      +   +        D
Sbjct: 225 PEMAFMHQEESLEVQEQYVAFLVQNV--------------------LDNCDYALDVLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILDR 240
                   + P   + Y  A    I+   DD  W D F       I      +    +  
Sbjct: 265 RAVLEKYTNLPFPRISYDDAIDLLIKNGFDDIQWGDDFGSPHETFIA--NSFDRPVFILN 322

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP             P  T+   +   ++       E++   E+   +E  +++ K    
Sbjct: 323 YPKAIKPFYM----KPHPTREDVVICADLIAPEGYGEIIGGSERATDYEFLLEQIKNHGL 378

Query: 301 ETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 379 SEEEY-SWYLDLRRYGSVPHSGFGLGLERTVTWISGIEHVREAIPFPRL 426


>gi|323351392|ref|ZP_08087048.1| asparagine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322122616|gb|EFX94327.1| asparagine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 448

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 120/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +        +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPAAIKAFYMKPVEGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMNDLGMDTTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|307718187|ref|YP_003873719.1| asparaginyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531912|gb|ADN01446.1| asparaginyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 457

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 91/351 (25%), Gaps = 38/351 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       +  RN +   +  +F E  F+ + +  +          +  F    +
Sbjct: 123 AHLRPRTNTIGAVMRVRNTLAWEIHRFFQERGFLYVHTPIITTGDAEGAGAL--FRVTTL 180

Query: 68  IQDH--------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFT 118
             D            P +L  S +   +    A    ++ F   +R        H  EF 
Sbjct: 181 PPDAPYDPTEDFFGAPAFLTVSGQLEAEAYALA-FVNVYTFGPTFRAENSHTPRHLAEFW 239

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           M+E   A    E  M      I    +   ++            +               
Sbjct: 240 MVEPEMAFCDLEGDMHLAQEFITHLLKAVLERHPEEMAFFEQWIAP-----------GIT 288

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
           +                      ++A +       W           +   L      I+
Sbjct: 289 DQLEAVVNTPFTHMTYTEAVEHLRKAPVSFTFPPEWGMDLQTEHERYLTEELVKGPV-IV 347

Query: 239 DRYPAPESALANIYPADPRFT-KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
             YP    A       D R       L     E+        D      R ++     + 
Sbjct: 348 TDYPKEIKAFYMKQNPDGRTVRAMDVLVPRLGEIIGGSQREDDYERLLARMQELGMRIEA 407

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +D             +G  +GFDRLV  V+G  NI +VI  P +
Sbjct: 408 ---YQWYLDLR----RYGGAPHAGFGLGFDRLVQYVSGMQNIRDVIPFPRT 451


>gi|171913093|ref|ZP_02928563.1| asparaginyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 454

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 106/348 (30%), Gaps = 40/348 (11%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+ +  ++ ++F E  F  + +  +  S       +  F    + 
Sbjct: 121 HLRPRTNLLGSVFRVRSRMAFAIHKFFQEQDFFYVHTPIITSSDCEGAGEM--FRVTTLP 178

Query: 69  Q--------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTM 119
           Q        D   KP +L  S +   +    A   KI+ F   +R        H  EF M
Sbjct: 179 QGGAAKPEEDFFGKPTFLTVSGQLQGEVFACA-LSKIYTFGPTFRAENSNTARHAAEFWM 237

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   A    +  M      ++   +   +            F++    T   A  ++  
Sbjct: 238 IEPEMAFYDLQADMGLAEANVKYLLKSLFETCGE----ELEFFNKFVD-TGLIARLQHTL 292

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                 +   D  D         ++G +  +   W           +      +  T+  
Sbjct: 293 DKPFQRVSYTDAVD------LLLKSGRKFEYPVEWGQNLQSEHERFLAEEHFQSPVTVF- 345

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKK 297
            YP            D R     ++    I       E++   ++  R +  ++      
Sbjct: 346 NYPRSLKPFYMRQNDDGRTVAAMDVLVPGI------GEIIGGSQREERLDLLEQAMAAHG 399

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +  E Y    D           +G  MGF+R +M  TG +NI +VI  
Sbjct: 400 LSEENYRWYADLRRF--GTVPHAGYGMGFERFLMFATGVSNIRDVIPF 445


>gi|56460435|ref|YP_155716.1| asparaginyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81363174|sp|Q5QZ13|SYN_IDILO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|56179445|gb|AAV82167.1| Asparaginyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 466

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/370 (16%), Positives = 118/370 (31%), Gaps = 46/370 (12%)

Query: 3   QIPSQPW--WNRD-FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-- 52
             P +    + R+  H R R       +  RN +  ++  +F E  ++ + +  +  S  
Sbjct: 111 MAPKRHSMEYLREYAHLRPRTNITGAVMRVRNALSQAIHRFFHEEGYLWVSTPIITTSDC 170

Query: 53  -PGNETH-------IRAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
               E         +    T+    D+      K  +L  S + + +    +   K++ F
Sbjct: 171 EGAGEMFRVSTLDMLNIPKTDKGEVDYSEDFFGKEAFLTVSGQLNVESYACS-LSKVYTF 229

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A  + + +      +++   +   ++         
Sbjct: 230 GPTFRAENSNTSRHLSEFWMVEPELAFATLDDVAGLAEAMLKYVFKAVLEERPDDMAFFA 289

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
              +  + I+  EA      + +  T       +    +  A + G+         D+ S
Sbjct: 290 ERIN-SDAISRLEAIVNNDFVHMDYTDAIEILKNCDRKFEYAVEWGV---------DLQS 339

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                  E ++G     IL  YP    A       D +             L     E++
Sbjct: 340 EHERYLAEEHVG--APIILKNYPRDIKAFYMRQNEDGKTVAAM------DVLAPGIGEII 391

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGAN 337
               +  R +   Q   ++          F   L        +G  +GF+RLV  VTG  
Sbjct: 392 GGSAREERLDILDQRIDEMNLPKEEY--GFYRDLRRYGTVPHAGFGLGFERLVAYVTGVQ 449

Query: 338 NINEVIWTPF 347
           NI +VI  P 
Sbjct: 450 NIRDVIPFPR 459


>gi|16803935|ref|NP_465420.1| asparaginyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47096479|ref|ZP_00234071.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a
           F6854]
 gi|224500248|ref|ZP_03668597.1| asparaginyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224501304|ref|ZP_03669611.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254827219|ref|ZP_05231906.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254831503|ref|ZP_05236158.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254899407|ref|ZP_05259331.1| asparaginyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912454|ref|ZP_05262466.1| asparaginyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936781|ref|ZP_05268478.1| asparaginyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284802341|ref|YP_003414206.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995483|ref|YP_003417251.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|20139878|sp|P58695|SYN_LISMO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|16411349|emb|CAC99974.1| ansB [Listeria monocytogenes EGD-e]
 gi|47015132|gb|EAL06073.1| asparaginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258599602|gb|EEW12927.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258609376|gb|EEW21984.1| asparaginyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284057903|gb|ADB68844.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060950|gb|ADB71889.1| asparaginyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|293590436|gb|EFF98770.1| asparaginyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 430

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 103/355 (29%), Gaps = 54/355 (15%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F++ID   L   +P         
Sbjct: 114 MDHRHLWLRSN--RQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFEEDAFLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPFSEPEYITVAEAF 174
              A    E  ++   N +    +                 +      +    IT  EA 
Sbjct: 224 PEMAFYKLEDSLQVQENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAI 283

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R                          + G     D  W D F       I  +     
Sbjct: 284 ER------------------------LHELGFD---DIVWGDDFGAPHETAIADS--FEK 314

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  YP            +        +   ++       E++   E+ H  E     
Sbjct: 315 PVFITHYPKAIKPFYMPEDPENDQV----VLCADMIAPEGYGEIIGGSERIHDLETLQAR 370

Query: 295 KKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +    +       +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 371 MEDFDLDQEAY-SWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRL 424


>gi|269138594|ref|YP_003295294.1| asparaginyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984254|gb|ACY84083.1| asparaginyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304558602|gb|ADM41266.1| Asparaginyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 466

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 108/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  YF EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRYFNENGYFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDAGKVDYSEDFFGREAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +      +++       ++    +  +   F++       + 
Sbjct: 244 LAEFWMVEPEVAFADLNDIAGVAEGMLKYVFNAVLEE----RADDMAFFAQRVDKDAIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        +  G +  +   W    S      +       
Sbjct: 300 LQRFVSSDFAQV-------DYTDAITILETCGKQFENPVFWGVDLSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDMLDK 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++  +    D  +   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 406 RLDEMGLKKE--DYWWYRDLRRYGTVPHAGFGLGFERLVAYVTGVQNVRDVIPFPRT 460


>gi|188534251|ref|YP_001908048.1| asparaginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|188029293|emb|CAO97170.1| Asparaginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 466

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +        
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 60  -RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLH 113
                T     ++      K  +L  S + + +   +A   KI+ F   +R        H
Sbjct: 185 ENLPRTPEGKVNYDEDFFGKEAFLTVSGQLNGETYASAIS-KIYTFGPTFRAENSHTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E        +++   +       + +  +   F+E         
Sbjct: 244 LAEFWMLEPEIAFADLEDNAALAEAMLKYVFKAV----LTERADDMAFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D          +G +  +  +W    S      +       
Sbjct: 300 LERFVTTDFAQV-------DYTEAVEILLASGQKFENPVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R E  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIAFPRT 460


>gi|327399624|ref|YP_004340493.1| Lysine--tRNA ligase [Hippea maritima DSM 10411]
 gi|327182253|gb|AEA34434.1| Lysine--tRNA ligase [Hippea maritima DSM 10411]
          Length = 339

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 91/313 (29%), Positives = 142/313 (45%), Gaps = 43/313 (13%)

Query: 28  IQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCK 87
           I  ++RE+F+   F E+ +  L+ S  +ET+I    T            +L +SPE   K
Sbjct: 68  ILKTIREFFLNRGFTEVLTPKLKESIIHETNINYIKTSAG---------FLTSSPEVEIK 118

Query: 88  KLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
           KLL+ G +K+F  + A+RN  +  LH+ EF +LEWY       Q+++  + +I+      
Sbjct: 119 KLLSLGFDKLFELSFAYRNDHKDKLHKKEFLILEWYELFSKPTQVIERLIELIKH----L 174

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
           N              ++ EYI  +EAF ++A ID+          +   L    ++  I 
Sbjct: 175 NGSDLLKYKDLPINLTQIEYIKYSEAFKQFAGIDI----------EHDRLSSLKKRFNIE 224

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
              D    +I   I   KIE  LG+   T++  +P      A +   +  + KRFELY  
Sbjct: 225 GELDRW--EIADAIFSLKIEKQLGVKHPTVIYNFPKE---RAALSKVEGGYAKRFELYIA 279

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGF 326
            IEL N  DE  +  E R RF+K               D  F+  L   +P SSGIA+G 
Sbjct: 280 GIELANCYDEENNSNEIRKRFKKN--------------DISFIEALEFGIPPSSGIAVGI 325

Query: 327 DRLVMLVTGANNI 339
           DRL+M++   + I
Sbjct: 326 DRLIMILLNRDRI 338


>gi|167748001|ref|ZP_02420128.1| hypothetical protein ANACAC_02738 [Anaerostipes caccae DSM 14662]
 gi|167652578|gb|EDR96707.1| hypothetical protein ANACAC_02738 [Anaerostipes caccae DSM 14662]
          Length = 461

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 106/357 (29%), Gaps = 45/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELI 67
            H R R          R++I  ++ ++F+E  F+ + +  +          +  F    +
Sbjct: 122 AHLRPRANTFQAVYRVRSLIAYAIHKFFMERDFVYVHTPIISGQDCEGAGEM--FQVTTL 179

Query: 68  IQDHIRK--------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
             + + +          +     L  S +    +  A     I+ F   +R  E     H
Sbjct: 180 DLEELSQGKKLDYREDFFERETSLTVSGQL-NGEAFAQAFRNIYTFGPTFRAEESNTTRH 238

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M    ++I+   +                F++     + + 
Sbjct: 239 AAEFWMIEPEMAFADLEDNMLLAEHMIKYIIQYV----LEQAPEEMGFFNKFVDKGLLDR 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               A  +                    ++      +  +W           +   +   
Sbjct: 295 LHHVAESEFARITYTE-------AIDILKEHNNMFQYPVSWGTDLQTEHERYLTEKVFKK 347

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    I       +  D +E+         
Sbjct: 348 PV-FVTDYPKEIKAFYMKQNPDGKTVAAVDLLVPGIGEIIGGSQREDDLEKLQM------ 400

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +    E    D DF   L      + SG  +GF+R+VM +TG  NI +VI  P +
Sbjct: 401 --RMGELEMNLSDYDFYLDLRKYGSTRHSGFGLGFERMVMYLTGMANIRDVIPFPRT 455


>gi|296103067|ref|YP_003613213.1| asparaginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057526|gb|ADF62264.1| asparaginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 441

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 109/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  +  + +  +  S       +   ST   
Sbjct: 100 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGYFWVSTPLITASDTEGAGEMFRVSTLDL 159

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 160 ENLPRTPEGKVDFDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 218

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A      +      +++   +   ++    +  +   F+E         
Sbjct: 219 LAEFWMLEPEVAFADLNDVAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDNEAIAR 274

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G +  +   W    S      +       
Sbjct: 275 LERFVSSDFAQV-------DYTDAVAILEKCGEKFENPVYWGVDLSSEHERYLAEKHFKA 327

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 328 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 380

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + ++   N     D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 381 RMQEMGLNPA---DYSWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 435


>gi|116329779|ref|YP_799498.1| tRNA synthetase class II (D, K and N) [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116122672|gb|ABJ80565.1| tRNA synthetase class II (D, K and N) [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
          Length = 315

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 92/328 (28%), Positives = 153/328 (46%), Gaps = 25/328 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L+KR    S LR++F +  ++E+D+  L+  P  E ++  F      +   ++  YL 
Sbjct: 7   EVLIKRAQFLSVLRKFFEKKNYLEMDTPCLKAVPSMEPYLDPFLVRSPSR---KEKGYLI 63

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           TSPE+S K++L+ G EKI+   H +R+  E    H  EF MLE+Y    S E LM  C  
Sbjct: 64  TSPEYSLKEILSKGLEKIYEITHTFRSGEEGSLFHSAEFLMLEFYTVGISLEDLMNFCTE 123

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++                      ++   I+V E+  +YA+  +  +  +    +R L  
Sbjct: 124 LLEVLDCEF--------QAFGFDRNKVRKISVEESLRKYAHCGISKSELDRVILERRLSE 175

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           + A++            D F  + +  +E +L       L  YP   +AL      +  F
Sbjct: 176 IPAEKRAYE--------DSFFIVFLNLVEAHLPKE-FVFLYDYPPELAAL---SKIESGF 223

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
            KRFELY  ++EL NA +EL DP+EQ  RF  E   +K +  E + +D      L   +P
Sbjct: 224 AKRFELYYGSLELGNAFEELTDPVEQISRFCHEQDLRKNLGKEVFSVDPGLERALREGIP 283

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWT 345
            S GI++G DRL++ + G +++ E+   
Sbjct: 284 DSCGISIGLDRLLLCILGGSSLREISPY 311


>gi|257867747|ref|ZP_05647400.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257874075|ref|ZP_05653728.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257876652|ref|ZP_05656305.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257801830|gb|EEV30733.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257808239|gb|EEV37061.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257810818|gb|EEV39638.1| asparaginyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 432

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 109/349 (31%), Gaps = 41/349 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F +N FI+ID   L   +P         
Sbjct: 115 MDHRHLWLRSS--KQHAIMQIRNEIIRATYEFFNKNGFIKIDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTDLFETNYFDQKAYLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      +   +        D
Sbjct: 225 PEMAFMHQEESLEVQEQYVAFLVQNV--------------------LDNCDYALDVLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILDR 240
                     P   + Y  A     +   DD  W D F       I      +    +  
Sbjct: 265 REVLKKYTKLPFPRISYDDAVALLQKNGFDDIQWGDDFGSPHETFIA--NSFDQPVFILN 322

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP             P  T+   +   ++       E++   E+    E  +++ +    
Sbjct: 323 YPKAIKPFYM----KPHPTREDVVICADMIAPEGYGEIIGGSERAIDHEYLLEQIRAHGL 378

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +       +L          +G  +G +R V  ++G  ++ E I  P  
Sbjct: 379 DENEY-SWYLDLRKYGSVPHTGFGLGLERTVTWLSGIEHVRESIPFPRL 426


>gi|325690553|gb|EGD32556.1| asparagine--tRNA ligase [Streptococcus sanguinis SK115]
 gi|332367062|gb|EGJ44802.1| asparagine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 448

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             ++ ++++ +      ++   +                  E     +AE F R+   D 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVL-NRAPQALETLERDVELLKRYIAEPFKRFTY-DE 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AIDLLQAHENDEDADYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P +P      +L            E++    +   ++  + +   +  +
Sbjct: 341 AAIKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDTLVAKMNDLGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 TSEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|152976944|ref|YP_001376461.1| asparaginyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189083268|sp|A7GTK8|SYN_BACCN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|152025696|gb|ABS23466.1| asparaginyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 463

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 109/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T   
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAYAIHKFFQERGFVHVHTPIITGSDTEGAGEMFRVTTHDM 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   +   L  S +   +    A    ++ F   +R        H
Sbjct: 182 NNLPKGEDGQVDDSKDFFGRETNLTVSGQLPAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E +M    ++++ A +                F++    TV E 
Sbjct: 241 AAEFWMVEPEIAFAELEDVMDLTEDMLKYAMKYV----LEHAPEEMEFFNKFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +       
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEQ-VFK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRMNDDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+    E       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMKEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMGNIRDVIPFPRT 457


>gi|325687642|gb|EGD29663.1| asparagine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 448

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 120/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAMMQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAE--------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++   +                 + +        + ++  EA 
Sbjct: 236 EYSYLTHDESLDLQEAYVKALIQGVLDRAPQALETLERDVELLKRYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I  + G+  
Sbjct: 295 -----IDLLQAHENDEDADYEHLE---------------HGDDFGSPHETWISNHFGV-- 332

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA   +        +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPAAIKAFYMKPVEGNPDRVLCADL-----LAPEGYGEIIGGSMREEDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +  +T    E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMNDLGMDTTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|300176814|emb|CBK25383.2| unnamed protein product [Blastocystis hominis]
          Length = 511

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/374 (16%), Positives = 105/374 (28%), Gaps = 48/374 (12%)

Query: 3   QIPSQPWWNRD----FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +           H R R          RN    +   +F +  F  I +  +  + 
Sbjct: 150 PLAKKRHTLEHLRDIAHLRSRSNTIAAVARVRNSCAFATHLFFQQRGFKYIHTPIITGAD 209

Query: 53  PGNETHIRAFSTELIIQ----------------DHIRKPLYLQTSPEFSCKKLLAAGEEK 96
                 +   +T L                   D   K + +  S + + +    A    
Sbjct: 210 CEGAGEMFTVTTMLDENIKDIPQTKEGKIDYSKDFFGKHVKMTVSGQLNVETYCCA-LCD 268

Query: 97  IFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQ 155
           ++ F   +R        H  EF M+E   A    +  M    + ++       +      
Sbjct: 269 VYTFGPTFRAENSHSVRHLAEFWMIEPEMAFCDLKMDMAVAEDYVKFCTAYVME------ 322

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
             N +     E         R  N+     +  P      +L   A+     V     W 
Sbjct: 323 -HNKDDLEFFEKQIEPGLHDRLRNVLEHPFVHLPYTKAIEILQEAAKTVKFEVQP--YWG 379

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNA 274
                     +       C  I+  YP    A       D +  +  ++    I EL   
Sbjct: 380 LDLGSEHERYLTEQ-VYKCPVIMTDYPKEIKAFYMKVNEDGKTVRAMDVLVPKIGELIGG 438

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLV 333
                +      R E+    K+ +        E +L          SG  +GF+RLVM V
Sbjct: 439 SQREENLDVLEKRIEELGMAKEGL--------EWYLDLRRYGSVPHSGFGLGFERLVMFV 490

Query: 334 TGANNINEVIWTPF 347
           TG  NI +VI  P 
Sbjct: 491 TGMENIRDVIPFPR 504


>gi|257869635|ref|ZP_05649288.1| asparaginyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257803799|gb|EEV32621.1| asparaginyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 432

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 108/349 (30%), Gaps = 41/349 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F  N FI+ID   L   +P         
Sbjct: 115 MDHRHLWLRSS--KQHAIMQIRNEVIRATYEFFNNNGFIKIDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTDLFETNYFDQKAYLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      +   +        D
Sbjct: 225 PEMAFMHQEESLEVQEQYVAFLVQSV--------------------LDNCDYALDVLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                     P   + Y  A +   +    D  W D F       I      +    +  
Sbjct: 265 RAILEKYTKLPFPRISYDDAVELLQKNGFEDIQWGDDFGSPHETFIA--NSFDQPVFILN 322

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP                T+   +   ++       E++   E+   +E  +++ +    
Sbjct: 323 YPKAIKPFYMKSHP----TRDDVVICADMIAPEGYGEIIGGSERATDYEFLLEQIRNHGL 378

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +       +L          +G  +G +R V  ++G  ++ E I  P  
Sbjct: 379 DENEY-SWYLDLRKYGSVPHTGFGLGLERTVTWLSGIEHVREAIPFPRL 426


>gi|94988159|ref|YP_596260.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94992046|ref|YP_600145.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|123257805|sp|Q1JCQ7|SYN_STRPB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123258209|sp|Q1JMN3|SYN_STRPC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94541667|gb|ABF31716.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94545554|gb|ABF35601.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 448

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  KP +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGKPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +     ++        +         +  + D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKR--YITEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             TL    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AITLLQEHEADEDTDYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDNYDALVAKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEYD-FYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|62179527|ref|YP_215944.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224582810|ref|YP_002636608.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|75484225|sp|Q57QZ8|SYN_SALCH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|62127160|gb|AAX64863.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224467337|gb|ACN45167.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322713995|gb|EFZ05566.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 466

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 105/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E   +    +++       ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFADLEDNARLAEAMLKYVFNAVLEE----RADDMKFFAERVDKDAIAR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G    +   W    S      +       
Sbjct: 300 LERFVSTDFAQV-------DYTEAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPKEIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMAEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|307111559|gb|EFN59793.1| hypothetical protein CHLNCDRAFT_33640 [Chlorella variabilis]
          Length = 405

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 107/353 (30%), Gaps = 51/353 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIR 60
           D     R               ++ +    RE      FIEI +  L      G      
Sbjct: 81  DVRLDNRYVDLRTPANQAIFRVQSAVCHLFRESLQGQGFIEIHTPKLLSGASEGGAA--- 137

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                +   D++ +P  L  SP+F  +  + +   ++F     +R        H  EFT 
Sbjct: 138 -----VFHFDYMGRPGCLAQSPQFYKQMAICSDLARVFEIGPVFRAENSYTHRHLCEFTG 192

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A       + D ++ +         + ++ +          E +       R   
Sbjct: 193 LDMEMAIHESYHEVLDVLDALFVHMFKGLNEQYARELEVIGEQYPFEPLKFLPKTLRLT- 251

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                                 Q+AG  V      +    R L + ++         +L 
Sbjct: 252 --------------FAEGIQMLQEAGYDVDPFGDLNTELERALGKLVKDKYNTE-FYMLH 296

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           RYP             D R++  F ++    E+ +    + DP+    R  +        
Sbjct: 297 RYPLAIRPFYTMPCKDDNRYSCSFVIFIRGEEIISGAQRVHDPVLLTQRAVEL------- 349

Query: 299 YNETYPID--EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                P+D  + ++      +P   G  +G +R+VML  G +NI +    P  
Sbjct: 350 ---GLPVDTIQSYIDSFKYGVPPHGGAGVGMERVVMLFCGLDNIRKTSMFPRD 399


>gi|15674719|ref|NP_268893.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|19745748|ref|NP_606884.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|21909997|ref|NP_664265.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896306|ref|NP_802656.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|56808340|ref|ZP_00366099.1| COG0017: Aspartyl/asparaginyl-tRNA synthetases [Streptococcus
           pyogenes M49 591]
 gi|71903182|ref|YP_279985.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71910351|ref|YP_281901.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94990041|ref|YP_598141.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|139474151|ref|YP_001128867.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|306827725|ref|ZP_07460997.1| asparagine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|54039685|sp|P67576|SYN_STRP3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|54039686|sp|P67577|SYN_STRP8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|54042046|sp|P67575|SYN_STRP1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122987033|sp|Q1JHS6|SYN_STRPD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123734117|sp|Q48UH6|SYN_STRPM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166232739|sp|A2RFM5|SYN_STRPG RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|13621841|gb|AAK33614.1| putative asparaginyl-tRNA synthetase [Streptococcus pyogenes M1
           GAS]
 gi|19747888|gb|AAL97383.1| putative asparaginyl-tRNA synthetase [Streptococcus pyogenes
           MGAS8232]
 gi|21904186|gb|AAM79068.1| putative asparaginyl-tRNA synthetase [Streptococcus pyogenes
           MGAS315]
 gi|28811557|dbj|BAC64489.1| putative asparaginyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|71802277|gb|AAX71630.1| hypothetical protein M28_Spy0516 [Streptococcus pyogenes MGAS6180]
 gi|71853133|gb|AAZ51156.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|94543549|gb|ABF33597.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|134272398|emb|CAM30654.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|304430043|gb|EFM33080.1| asparagine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 448

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  KP +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGKPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +     ++        +         +  + D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKR--YITEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             TL    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AITLLQEHEADEDTDYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDNYDALVAKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEYD-FYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|161503869|ref|YP_001570981.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160865216|gb|ABX21839.1| hypothetical protein SARI_01958 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 492

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 106/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 151 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 210

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 211 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 269

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E   +    +++   +   ++    +  +   F+E         
Sbjct: 270 LAEFWMLEPEVAFADLEDNARLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAIAR 325

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D         + G +  +   W    S      +       
Sbjct: 326 LERFVSTDFAQV-------DYTDAVAILARCGKKFENPVFWGVDLSSEHERYLAEEHFKA 378

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 379 PVVVK-NYPKEIKAFYMRLNGDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 431

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 432 RMAEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 486


>gi|259908902|ref|YP_002649258.1| asparaginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964524|emb|CAX56034.1| Asparaginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478896|emb|CAY74812.1| asparaginyl-tRNA synthetase [Erwinia pyrifoliae DSM 12163]
 gi|310767197|gb|ADP12147.1| asparaginyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 466

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +        
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 60  -RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLH 113
                T     ++      K  +L  S + + +   +A   KI+ F   +R        H
Sbjct: 185 ENLPRTPEGKVNYDEDFFGKEAFLTVSGQLNGETYASAIS-KIYTFGPTFRAENSHTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E        +++ A +       + +  +   F+E         
Sbjct: 244 LAEFWMLEPEMAFADLEDNAALAEAMLKYAFKAV----LTERADDMAFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D                      +G +  +  +W    S      +       
Sbjct: 300 LERFVTTDFAQVNYTE-------AVEILLASGQKFENPVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R E  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIAFPRT 460


>gi|221119490|ref|XP_002155876.1| PREDICTED: similar to aspartyl-tRNA synthetase [Hydra
           magnipapillata]
          Length = 570

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 104/326 (31%), Gaps = 33/326 (10%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
             I    RE+     F E+ +  +  +  +E     F       +      YL  SP+  
Sbjct: 269 AGICKLFREHLDSRGFTEVHTPKIISAA-SEGGANVFKVSYFKGNA-----YLAQSPQLY 322

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
            +  +A   +K++     +R  +     H  EF  L+   A + +   +   +  +  A 
Sbjct: 323 KQMAIAGDFDKVYTIGSVFRAEDSNTHRHLCEFIGLDIEMAFKDHYHEVIQEIGNLFIAI 382

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
               +  +S +                     +  ++    L  P+           ++ 
Sbjct: 383 FKGLRDRYSNEISTVAKQFP---------CEPFKFLEPSLVLTFPE------AIKMLREN 427

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFE 263
           G+  +          + L + ++     +   ILD+YP           P  P  +  ++
Sbjct: 428 GVEYSDKYDLITPNEKFLGKLVKAKYDTD-FYILDKYPLAVRPFYTMPDPNVPGASNSYD 486

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
           ++    E+ +    + DP     R +     K  I +      + ++          +G 
Sbjct: 487 MFMRGEEILSGAQRIHDPEFLTERAKHH---KIAIDDI-----KAYIESFKYGCSPHAGG 538

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFS 348
            +G +R+VML  G  NI +    P  
Sbjct: 539 GIGMERVVMLYLGLGNIRKASMFPRD 564


>gi|217963952|ref|YP_002349630.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217333222|gb|ACK39016.1| asparaginyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571478|emb|CAR84657.1| asparaginyl-tRNA synthetase [Listeria monocytogenes L99]
          Length = 430

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 103/355 (29%), Gaps = 54/355 (15%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F++ID   L   +P         
Sbjct: 114 MDHRHLWLRSN--RQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFEEDAFLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPFSEPEYITVAEAF 174
              A    E  ++   N +    +                 +      +    IT  EA 
Sbjct: 224 PEMAFYKLEDSLQVQENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAI 283

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R                          + G     D  W D F       I  +     
Sbjct: 284 ER------------------------LHELGFD---DIVWGDDFGAPHETAIADS--FEK 314

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  YP            +        +   ++       E++   E+ H  E     
Sbjct: 315 PVFITHYPKAIKPFYMPEDPENDQV----VLCADMIAPEGYGEIIGGSERIHDLETLQAR 370

Query: 295 KKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +    +       +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 371 MEDFDLDQEAY-SWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRL 424


>gi|145592543|ref|YP_001154545.1| aspartyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145284311|gb|ABP51893.1| aspartyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 428

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/363 (17%), Positives = 119/363 (32%), Gaps = 60/363 (16%)

Query: 3   QIPSQPWW---NRDFHYRRRPFLLKR----------NMIQSSLREYFVENQFIEIDSM-S 48
            +P   W    +     + R   LKR          + I  ++R+   E  F+E+ +   
Sbjct: 105 PLPLDIWSETPDLATRLKWRSVDLKRPRNLAVFSTASAILRAIRDVMYEEGFVEVFTPKI 164

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +  S      +           +  +  YL  SP+   K+ L A  E++F    A+R  +
Sbjct: 165 IVTSTEGGAELFPVM-------YFERVAYLSQSPQLY-KEQLTASLERVFEIGPAYRAEK 216

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H  EF  ++   A   Y  +M     +++                          
Sbjct: 217 HNTDYHLNEFISVDAEAAFMDYNDIMDILEKLVKRVIST--------------------- 255

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           IT        A +     +    + D      + +Q G  ++    W D  +  + + + 
Sbjct: 256 ITTVAHRLEEAGLKPLLEISKIPRVDYDEAVERLRQLGYSIS----WGDDLNVEMQKALT 311

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
              G      L  +PA           +   ++ ++L    IE+ +    +        R
Sbjct: 312 KFYG--PVYFLVHFPASLRPFYT-KRKEGDKSESYDLIINGIEVASGATRVH------RR 362

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E E + K++  +      E  LA     MP  +G  +GF+RLV  + G +N+      P
Sbjct: 363 DELEEEMKRRGLDPRLF--ESHLAVFDYGMPPHAGFGLGFNRLVAALLGLDNVRHATLYP 420

Query: 347 FSQ 349
             +
Sbjct: 421 RDR 423


>gi|291561911|emb|CBL40716.1| asparaginyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 463

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 53/360 (14%), Positives = 101/360 (28%), Gaps = 47/360 (13%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
                R    +     R++I  ++ +YF E  F+ + +  +  S       +  F    +
Sbjct: 122 PHLRARTNTFQAVFRVRSLIAYAIHQYFQEQGFVYVHTPLITSSDCEGAGEM--FQVTTL 179

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             D             K  +     L  S + + +    A    ++ F   +R       
Sbjct: 180 DLDNVPKTEDGAVDYSKDFFGKHTSLTVSGQLNAETYAMA-FRNVYTFGPTFRAENSNTT 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M     +++                  N F++     + 
Sbjct: 239 RHAAEFWMIEPEMAFADLDDNMAVAEGMLKYVIRYV----LENAPSEMNFFNQFVDKGLL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N + G                  ++      +   W           +   + 
Sbjct: 295 DRLNHVLNSEFGHVTYTE-------AVKLLEEHNDEFDYKVFWGCDLQTEHERYLTEKI- 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                 +  YP    A       D +     +     I E+        D  +   R  +
Sbjct: 347 FKRPVFVTDYPKEIKAFYMKLNPDGKTVAAVDCLVPGIGEIIGGSQREDDYEKLLARMNE 406

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +         P D  F   L      + SG  +GF+R VM +TG  NI +V+  P +
Sbjct: 407 LGLK---------PEDYGFYLDLRKYGSVRHSGFGLGFERCVMYLTGMGNIRDVVPFPRT 457


>gi|146311106|ref|YP_001176180.1| asparaginyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166980087|sp|A4W8U9|SYN_ENT38 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|145317982|gb|ABP60129.1| asparaginyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 466

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 109/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  +L  +F E  +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNMIGAVARVRHTLAQALHRFFDEQGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRTPEGKVDFDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDVAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDSDAVAR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G +  +   W    S      +       
Sbjct: 300 LERFVSADFAQV-------DYTDAVAILEKCGEKFENPVYWGVDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +++     P D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMEEMGL--NPADYSWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIAFPRT 460


>gi|77408513|ref|ZP_00785250.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77172870|gb|EAO76002.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 448

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  S  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  KP +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGKPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +     ++        +         +  + D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKR--YIAEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             TL    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AITLLQEHEADEDTDYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDNYDALVAKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEYD-FYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|260597330|ref|YP_003209901.1| asparaginyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216507|emb|CBA29684.1| Asparaginyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 467

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 109/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHTLAQALHRFFHEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRDDQGKIDFDKDFFGKEAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTSRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +    +    +  +   F+E       + 
Sbjct: 245 LAEFWMLEPEVAFANLNDVAGLAEAMLKYVFKAVLDE----RMDDMKFFAERVDKEAIDR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        +++G +  +   W    +      +       
Sbjct: 301 LERFISADFAQV-------DYTDAVAILEKSGEKFENPVYWGVDLASEHERYLAEKHFKA 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +++       D  +   L        +G  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 407 RMEEMGL--NKEDYWWYRDLRRYGTVPHAGFGLGFERLIAYVTGVQNVRDVIPFPRT 461


>gi|15614259|ref|NP_242562.1| asparaginyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139934|sp|Q9KC78|SYN_BACHD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|10174313|dbj|BAB05415.1| asparaginyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 430

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 104/350 (29%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   L  RN I  +  E+F EN F+++D   L   +P         
Sbjct: 114 MDHRHLWIRSR--KQHAVLRIRNEIIRATYEFFHENGFVKVDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +   +    A   ++F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFDEDAFLSQSGQLYMEAAALA-FGRVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E+ ++   N +    +   +                          +    D
Sbjct: 224 PEMAFVEFEESLEIQENYVAYIVQSVLKHCA--------------------IELKTLGRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +    +   D  W D F       I  +   +    +  Y
Sbjct: 264 TSVLESIQAPFPRISYDDAIKFLHEKGFDDIEWGDDFGAPHETAIAEH--FDKPVFITHY 321

Query: 242 PAPESALAN---IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P               D              E+      + D    + R E+       +
Sbjct: 322 PTSLKPFYMEPDPNRDDVVLCADLIAPEGYGEIIGGSQRISDYDLLKKRLEEHDL---SL 378

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + +D   L         SG  +G +R V  ++GA ++ E I  P  
Sbjct: 379 DAYAWYLD---LRK-YGSVPHSGFGLGLERTVGWISGAGHVRETIPFPRL 424


>gi|157273325|gb|ABV27224.1| asparaginyl-tRNA synthetase [Candidatus Chloracidobacterium
           thermophilum]
          Length = 438

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 65/348 (18%), Positives = 116/348 (33%), Gaps = 34/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+   L  R+ +  ++R++   + FI  D+  L  +    T      
Sbjct: 116 MDHRHLWLRSK--RQHAILRVRHEVVRAVRDFLDNDGFILADTPILTPAACEGT------ 167

Query: 64  TELIIQDHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           T L   D+  +   YL  S +    +  AA   K++CF   +R  +     H  EF M+E
Sbjct: 168 TTLFELDYFDEGKAYLTQSGQLY-NEATAAAFGKVYCFGPTFRAEKSKTRRHLTEFWMVE 226

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ + + +M                + F    V        E +T+ E     + ++
Sbjct: 227 PEVAYATLDDMM-------------VLAERFLCFIVERILERRKEELTLLERD--ISKLE 271

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                      D  +  L       ++ HD  W   F       +      +   I+ RY
Sbjct: 272 AIAPPFPRLSYDEAVQMLHEAHLAGKLEHDFIWGGDFGAPDETYLAQQ--FDRPVIIHRY 329

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           PA   A            +R E+  C   L       +    QR +    + ++   +N 
Sbjct: 330 PAQVKAFYMEEDP-----ERPEVVLCMDVLAPEGYGEIIGGGQRMQSYDRLAQRIAEHNL 384

Query: 302 TYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          +G  MG +R V  + G  ++ E I  P  
Sbjct: 385 PREAFEWYLDLRRYGTVPHAGFGMGIERCVAWLCGLEHVRETIPFPRM 432


>gi|315282918|ref|ZP_07871218.1| asparaginyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613436|gb|EFR87280.1| asparaginyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 430

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 103/355 (29%), Gaps = 54/355 (15%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F++ID   L   +P         
Sbjct: 114 MDHRHLWLRSN--RQHAIMKIRNEIIRASYEFFNQEGFLKIDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFEEDAFLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPFSEPEYITVAEAF 174
              A    E  ++   N +    +                 +      +    IT  EA 
Sbjct: 224 PEMAFYKLEDSLQVQENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAI 283

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R                          + G     D  W D F       I  +     
Sbjct: 284 ER------------------------LHELGFD---DIVWGDDFGAPHETAIADS--FEK 314

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  YP            +        +   ++       E++   E+ H  E     
Sbjct: 315 PVFITHYPKAIKPFYMPEDPENDQV----VLCADMIAPEGYGEIIGGSERIHDLETLQAR 370

Query: 295 KKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +    +       +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 371 MEDFDLDQEAY-SWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRL 424


>gi|19703392|ref|NP_602954.1| asparaginyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|22096189|sp|Q8RH70|SYN_FUSNN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|19713460|gb|AAL94253.1| Asparaginyl-tRNA synthetase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 461

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  +L ++F EN F  + +  +  S       +  F    +
Sbjct: 120 AHLRARTNTFSAVFRVRSVLAYALHKFFQENNFAYVHAPIITGSDAEGAGEM--FRITTL 177

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +             K  +     L  S + +  +   A    ++ F   +R       
Sbjct: 178 DLNKVPKKENGEVDFSKDFFGKSTNLTVSGQLNL-ETFCAAFRNVYTFGPTFRAEYSNTA 236

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      LM+    +++   +                F+      + 
Sbjct: 237 RHASEFWMVEPEIAFGDIFALMELAEAMVKYIIKYV----MDNCPEEMEFFNSFIEKGLF 292

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D G                  +++G +      W           +     
Sbjct: 293 DKLNNVLNNDFGRVTYTE-------AIEILEKSGKKFEFPVKWGIDLQSEHERYLAEEYF 345

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +  +  +L A  I       +  D  E   +    
Sbjct: 346 KKPV-FVTDYPKDIKAFYMKLNEDNKTVRAMDLLAPGIGEIIGGSQREDNYELLTK---- 400

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K+   NE     E +L          SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 401 -RMKELGLNEEDY--EFYLDLRRFGSFPHSGYGLGFERMMMYLTGMQNIRDVIPFPRT 455


>gi|292487848|ref|YP_003530723.1| asparaginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899075|ref|YP_003538444.1| asparaginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198923|emb|CBJ46033.1| asparaginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553270|emb|CBA20315.1| asparaginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312171970|emb|CBX80227.1| asparaginyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 466

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +        
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 60  -RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLH 113
                T     ++      K  +L  S + + +   +A   KI+ F   +R        H
Sbjct: 185 ENLPRTPEGKVNYDEDFFGKEAFLTVSGQLNGETYASAVS-KIYTFGPTFRAENSHTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E        +++ A +       + +  +   F+E         
Sbjct: 244 LAEFWMLEPEMAFADLEDNAALAEAMLKYAFKAV----LTERADDMAFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D                      +G +  +   W    S      +       
Sbjct: 300 LERFVTTDFAQVNYTE-------AIEILLASGQKFDNPVAWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R E  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIAFPRT 460


>gi|197117272|ref|YP_002137699.1| asparaginyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197086632|gb|ACH37903.1| asparaginyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 461

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 103/357 (28%), Gaps = 44/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +   +  +F E  F+ + +  +  +       +  F    +
Sbjct: 121 AHMRVRSNTFGAVFRVRSALAQEVHRFFAERGFLYVHTPIITANDCEGAGEL--FRVTTL 178

Query: 68  IQD---------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
             +            +  +     L  S +   +    A    I+ F   +R        
Sbjct: 179 DLNNPPRVEGEIDFAQDFFAKATGLTVSGQLEGELFAQA-FSDIYTFGPTFRAENSNTAR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A              ++     A        + +   F+      + E
Sbjct: 238 HAAEFWMIEPEMAFADLSDDADLAEAFLKRLCRFA----LDNCDDDMRFFNAQIDKGLIE 293

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                     G    +  + D      + ++A +       W           +   +  
Sbjct: 294 RIE-------GVAQASFARMDYGEAIERLKKAPVSFQFPVEWGLDLQSEHERYLTEQVVG 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
                +  YP    A       D R     +L    +       E++   ++  R E  +
Sbjct: 347 GPV-FIMNYPKDIKAFYMRLNDDGRTVAAMDLLVPKV------GEIIGGSQREERLEPLI 399

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               ++  E   +   +L          +G  +GF+RL+M +TG  NI +VI  P +
Sbjct: 400 GRMMEVGIEPESL-SWYLDTRRWGSTPHAGFGLGFERLIMYLTGMENIRDVIPFPRT 455


>gi|291484658|dbj|BAI85733.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 431

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 63/348 (18%), Positives = 111/348 (31%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F    F+++D   L   +P         
Sbjct: 115 MDHRHLWLRSK--RQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 166 TTELFATKYFDEDAYLSQSGQLYMEAAAMA-LGKVFSFGPTFRAEKSKTKRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E+ ++   N +    +   +      N      S+ E I        Y    
Sbjct: 225 PEMAFVEFEENLQVQENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITY---- 280

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++ G     D  W D F       I  +   +    + RY
Sbjct: 281 -------------DEAIEFLKEKGFD---DIEWGDDFGAPHETAIAEHY--DKPVFITRY 322

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKKKIYN 300
           P           +D        +   ++       E++   E+ H  E  E + K+   +
Sbjct: 323 PTSLKPFYMQPASDREDV----VLCADLIAPEGYGEIIGGSERIHDMELLESRLKEHGLD 378

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                    L         SG  +G +R V  ++GA ++ E I  P  
Sbjct: 379 SDAYKWYAELRK-YGSVPHSGFGLGLERTVAWISGAPHVRETIPFPRL 425


>gi|163942293|ref|YP_001647177.1| asparaginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163864490|gb|ABY45549.1| asparaginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 463

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 113/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +              + F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYV----LEHAPEEMDFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGAEFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRMNEDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|302764308|ref|XP_002965575.1| hypothetical protein SELMODRAFT_84215 [Selaginella moellendorffii]
 gi|300166389|gb|EFJ32995.1| hypothetical protein SELMODRAFT_84215 [Selaginella moellendorffii]
          Length = 521

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 102/333 (30%), Gaps = 30/333 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ I S   ++   N+F +I +  L                  +Q    +P  L
Sbjct: 210 QAIFTVQSEISSLFHDFLRANKFRQIHTPKLIAGASEGGSAV-----FKLQYANDQPACL 264

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   +  +     ++F     +R  +     H  EF  L++    + +   + D +
Sbjct: 265 AQSPQLHKQMAICGDFRRVFEIGPVFRAEKSFTHRHLCEFIGLDFEMEIKEHYFEIIDLI 324

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
             +         K    +    N     E +                 LD          
Sbjct: 325 GKLFIYVFNELNKNCKKELETINSQYPFEPLQY---------------LDETLVLAFAEG 369

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
               ++AG              R L   ++     +   IL RYP             DP
Sbjct: 370 IQMLKEAGFETDPLGDLDTETERRLGLLVKERYKTD-FYILHRYPLAVRPFYTMPAVDDP 428

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
           +++  F+++    E+ +    + D      R E+   +   I        ++++      
Sbjct: 429 KYSNSFDVFIRGEEIISGAQRVHDKDLLLKRIEECNIDPNAIGL------QNYINSFSYG 482

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P   GI +G +R+ ML    +NI +V   P  
Sbjct: 483 APPHGGIGVGLERVAMLFCNLDNIRKVSLFPRD 515


>gi|237722500|ref|ZP_04552981.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229448310|gb|EEO54101.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 447

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 106/344 (30%), Gaps = 31/344 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  YF E  F   ++  +  S       +    TEL 
Sbjct: 120 AHLRLRTNIFGAIFRMRHNMAFAIHRYFNERGFFYFNTPIITTSDSEGAGELFEVKTELK 179

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH 126
             D    P  L  S +   +    A    I+ F+  +R        H  EF M+E   A 
Sbjct: 180 D-DFFGSPANLTVSGQLEGELGALA-LGAIYTFSPTFRAENSNTFRHLSEFWMIEPEVAF 237

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
                 M    + ++     A +   S      +               +   +     +
Sbjct: 238 NDINDNMDLAEDFLKYLIRYALENCESDLAFLNDNVD-------NGLMDKLHFVANNEFM 290

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
             P      +L    +Q    V       D+ +      +E         I+  YP    
Sbjct: 291 RLPYSKAIEILQESGRQFDYPVKPGI---DLCAEHERHLVEE--YFRRPVIVTDYPKEIK 345

Query: 247 ALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           A       D +  +  ++    I E+    +   D  +   R ++     +K+       
Sbjct: 346 AFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYTKLLQRMKELNMNTEKL------- 398

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +L          SG  +GF+RL++ +TG  NI +VI  P +
Sbjct: 399 -WWYLESRKFGTVPHSGFGLGFERLMLFITGMTNIRDVIPFPRT 441


>gi|289739549|gb|ADD18522.1| aspartyl tRNA synthetase [Glossina morsitans morsitans]
          Length = 538

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 112/355 (31%), Gaps = 51/355 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   E  F EI +  +  +  +E    
Sbjct: 212 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEKGFTEIHTPKIISAA-SEGGAN 270

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K+F     +R  +     H  EF  
Sbjct: 271 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVFTVGAVFRAEDSNTHRHLTEFVG 325

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +   +              F+            E     EA  +  N
Sbjct: 326 LDLEMAFKYHYHEVLHTI-----------GDTFTAMFKGLRDLYALE----IEAVRQQFN 370

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ++    L+              ++ GI    ++  S    ++L   ++     +   ILD
Sbjct: 371 VEPFKFLEPSLVLKFSDGVAMLREVGIETGDEEDLSTPNEKMLGRLVKAKYDTD-FYILD 429

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P +P ++  ++++    E+ +    + D      R +         
Sbjct: 430 KFPLAIRPFYTMPDPTNPVYSNSYDMFMRGEEILSGAQRIHDAEFLTERAKH-------- 481

Query: 299 YNETYPID----EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID      ++       P  +G  +G +R+VML  G +NI +    P  
Sbjct: 482 ----HGIDINKIAAYIESFRFGCPPHAGGGIGLERVVMLYLGLDNIRKTSMFPRD 532


>gi|229112023|ref|ZP_04241566.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229152756|ref|ZP_04280939.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228630576|gb|EEK87222.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228671346|gb|EEL26647.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 463

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 111/359 (30%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +  F     
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEM--FRVTTQ 179

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +++ K            +     L  S + + +    A    ++ F   +R       
Sbjct: 180 DLNNLPKGEDGKVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTT 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      +M    ++++ A +                F+     TV 
Sbjct: 239 RHAAEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N D G                  Q++G    +   W           +   + 
Sbjct: 295 ERMNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI- 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    I       EL+   ++  R +  
Sbjct: 347 FKRPVFVTDYPKDIKAFYMRLNEDGKTVAATDLLVPGI------GELIGGSQREERMDVL 400

Query: 292 M-QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 401 VDRIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|333029319|ref|ZP_08457380.1| Asparaginyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332739916|gb|EGJ70398.1| Asparaginyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 467

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 102/359 (28%), Gaps = 44/359 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++ +YF +  F    +  +  S       +  F    +
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAYAIHKYFHDRGFFYFHTPLITGSDAEGAGEM--FQVTTL 180

Query: 68  IQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +                  K   L  S +   +    A    I+ F   +R       
Sbjct: 181 DLNNVPKDENGKINYKEDFFGKEANLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTP 239

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M    + I+   + A          +    +E     + 
Sbjct: 240 RHLAEFWMIEPEVAFNDNNDNMNLAEDFIKYCVQWA----LDNCMDDLKFLNEHFDKGLI 295

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E       ++                  +A   G +      W    +      +     
Sbjct: 296 ERLQGVVKVEFKRATYTEGIKVLE----EAVAKGHKFEFPVYWGADLASEHERFLVEEHY 351

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                I+  YP    A       D +  +  ++    I E+    +  +D      R E+
Sbjct: 352 KRPV-IMTDYPKEIKAFYMKQNEDGKTVRGMDVLFPKIGEIIGGSEREVDYDTLMQRVEE 410

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                K +          +L          SG  +GF+RL++ VTG +NI +VI  P +
Sbjct: 411 NHIPLKDM--------WWYLDTRKYGSCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRT 461


>gi|118575444|ref|YP_875187.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118193965|gb|ABK76883.1| aspartyl/asparaginyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 522

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 62/332 (18%), Positives = 104/332 (31%), Gaps = 49/332 (14%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDHIRKPLY 77
                R+ +    REYF EN F+E  +  +  +   G           L    +  K  +
Sbjct: 231 ELFHARSAVLRETREYFYENGFVEASTPKMISTATEGGAA--------LFPIFYYNKEAF 282

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   K+ L    E++F     +R        H  E   ++   A   Y  +M   
Sbjct: 283 LAQSPQLY-KEQLTMSLERVFEIGPIFRAEPSRTNRHLAEAISIDLEEAFVDYNDIMDRI 341

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
            +I++ AA  A             P    E         RY   D               
Sbjct: 342 SDIVKRAASAATPYAGGPGAQFAVPDVPAE-------IPRYTYAD--------------- 379

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
           L  + + AG +      W D              G+     +  +PA           D 
Sbjct: 380 LLDRIKGAGAKAE----WGDDL----YPSALKKAGLEGFYFITDWPAGPKPFYVKVGPDG 431

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM 316
           R ++ F+L   ++E+ +    + +  E   R                       A    +
Sbjct: 432 RTSESFDLMFGDLEISSGSTRIDNRAELEERM-------AAKGMNAGSFGHHLAAFDYGV 484

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           P  +G  +G +RL+M +TG  NI +V + P  
Sbjct: 485 PPHAGCGIGLERLMMALTGTENIRDVTFYPRD 516


>gi|95930303|ref|ZP_01313040.1| asparaginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133555|gb|EAT15217.1| asparaginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 457

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 107/359 (29%), Gaps = 48/359 (13%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++ ++F +  F+ + +  +  S       +  F    +
Sbjct: 117 AHLRPRSNTFGAVFRLRNALSYAVHQFFQQRDFLYVHTPIITASDCEGAGEL--FRVTTL 174

Query: 68  IQDHIRK---------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
              +  K           +     L  S +   +    A    I+ F   +R        
Sbjct: 175 DPANPPKNNGRIDWQKDFFGARTGLTVSGQLQGELFATA-FSDIYTFGPTFRAENSNTSR 233

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A  +     +   + +R   + A +                E +    
Sbjct: 234 HASEFWMIEPEIAFANLADDCQLAEDFLRYLVKYALEHCA-------------EDLQFFN 280

Query: 173 AFARYANIDLGTTLDNPD--QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                  +D  T L +             Q + +G        W           +    
Sbjct: 281 DRIEKGLLDKLTALADATFSTMTYTEAIEQLKNSGQNFEFPVEWGLDLQSEHERYLCEQ- 339

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
            +N    +  YP    A       D +     +L    +       E++   ++  R + 
Sbjct: 340 VVNGPLFVTDYPKEIKAFYMRANEDGKTVAAMDLLVPRV------GEIIGGSQREERLDV 393

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +++      +D  +L          +G  +GF+RL+M ++G  NI +VI  P +
Sbjct: 394 LTARMEELDMAPESLDW-YLDIRRWGSCPHAGFGLGFERLIMYLSGMENIRDVIPFPRT 451


>gi|312864673|ref|ZP_07724904.1| asparagine--tRNA ligase [Streptococcus downei F0415]
 gi|311099800|gb|EFQ58013.1| asparagine--tRNA ligase [Streptococcus downei F0415]
          Length = 448

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 117/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  ++F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAIMQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  +++Q M      ++   +    K  +   +           +  E   +  + D 
Sbjct: 236 EYSFLNHDQSMDLQEAYVKALIQGVLDK--APHALEILERDVDLLKSYIEKPFKRVSYDE 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AIDLLQAHENDPDTDYDHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +   +  +
Sbjct: 341 ASFKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREDDYDALVAKMDALEMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|260589025|ref|ZP_05854938.1| asparagine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540804|gb|EEX21373.1| asparagine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 463

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 103/359 (28%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++I  ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFQAVFRVRSLIAYAIHQFFQEQGFVYVHTPLITGSDCEGAGEM--FQVTTMD 180

Query: 69  QDH----------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +             +  +     L  S +    +  A     I+ F   +R        
Sbjct: 181 LNDIPKTEEGKVDFSQDFFKKPTNLTVSGQL-NGETFAQAFRNIYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +  M    ++++                  N F+      + +
Sbjct: 240 HAAEFWMIEPEMAFSDLDDNMALAESMLKYVIRYV----LENAPEEMNFFNSFVDKGLLD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N + G                  ++A  +  +   W           +   +  
Sbjct: 296 RLNNVLNSEFGHVTYTE-------AIEILEKANDKFDYKVYWGCDLQTEHERYLTEQVYK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+           +   R ++ 
Sbjct: 349 RPV-FVTDYPKEIKAFYMKQNEDGKTVAAMDCLVPGIGEIIGGSQREDSYEKLSQRMKEM 407

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +  E    D  F   L      + SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 408 N-----LNEE----DYGFYLDLRKYGSTRHSGFGLGFERCVMYLTGMQNIRDVIPFPRT 457


>gi|194016905|ref|ZP_03055518.1| asparaginyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194011511|gb|EDW21080.1| asparaginyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 431

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 108/349 (30%), Gaps = 42/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F +  F+++D   L   +P         
Sbjct: 115 MDHRHLWLRSK--KQHAIMKIRNEIIRATYEFFHQEGFVKVDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTELFATKYFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   + + ++   N +    +   +      +                        D
Sbjct: 225 PEMAFVEFNENLEYQENYVTHVVQSVLENCKVELHT--------------------LGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                +      R       +    +   D  W D F       I  +   +    +  Y
Sbjct: 265 TAKLENIKTPFPRITYDEAIKFLQEKGFDDIEWGDDFGAPHETAIAESY--DKPVFITHY 322

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKKKI-Y 299
           P            D        +   ++       E++   E+ H  E  E + K+    
Sbjct: 323 PTSLKPFYMQPAPDRDDV----VLCADLIAPEGYGEIIGGSERVHDLELLEARLKEHGLD 378

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ETY    +           SG  +G +R V  ++GA ++ E I  P  
Sbjct: 379 QETYKWYTELRQ--YGSVPHSGFGLGLERTVAWISGAPHVRETIPFPRL 425


>gi|154505525|ref|ZP_02042263.1| hypothetical protein RUMGNA_03062 [Ruminococcus gnavus ATCC 29149]
 gi|153794183|gb|EDN76603.1| hypothetical protein RUMGNA_03062 [Ruminococcus gnavus ATCC 29149]
          Length = 463

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 102/357 (28%), Gaps = 45/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------IR 60
           H R R          R+MI  ++ ++F E  F+ + +  +  S      E        ++
Sbjct: 123 HLRPRTNTFQAVFRVRSMIAYAIHQFFQERGFVYVHTPLITGSDCEGAGEMFQVTTLDLK 182

Query: 61  AFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                        K  +     L  S +    +  A     I+ F   +R        H 
Sbjct: 183 DVPKSADGSIDYSKDFFGKETNLTVSGQL-NGETFAQAFRSIYTFGPTFRAENSNTTRHA 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E  M    ++++                  N F+      + +  
Sbjct: 242 AEFWMIEPEIAFADLEDNMDLAESMLKYVISYV----LENAPEEMNFFNSFVDKGLLDRL 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               N D                     +   +  +  +W           +   +    
Sbjct: 298 NNVVNSDFARVTYTE-------AVDILMKNNDKFEYKVSWGTDLQTEHERYLTEEIYKRP 350

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP    A       D +     +     I E+        D  + R R  +   
Sbjct: 351 V-FVTDYPKEIKAFYMKQNDDGKTVAAVDCLVPGIGEIIGGSQREDDFEKLRTRMAEM-- 407

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +  E    D  F   L      + +G  +GF+R VM +TG +NI +VI  P +
Sbjct: 408 ---DLNEE----DYKFYLDLRKYGSTRHAGFGLGFERCVMYLTGMSNIRDVIPFPRT 457


>gi|229013760|ref|ZP_04170888.1| Asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228747429|gb|EEL97304.1| Asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 463

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 111/356 (31%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAG------------EEKIFCFAHAWRNGEQ-GCLHQ 114
                 +   +  S +F  K+                    ++ F   +R        H 
Sbjct: 182 NNVAKGEDGQVDESKDFFAKETNLTVSGQLNAEAYALAFRDVYTFGPTFRAENSNTTRHA 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A      +M    ++++ A +              + F+     TV E  
Sbjct: 242 AEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYV----LEHAPEEMDFFNSFVDKTVLERM 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               N D G                  Q++G    +   W           +   +    
Sbjct: 298 NNVINSDFGRITYTE-------AIKVLQESGAEFKYPVEWGIDLQTEHERYLSEEI-FKR 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM-Q 293
              +  YP    A       D +     +L    I       EL+   ++  R +  + +
Sbjct: 350 PVFVTDYPKDIKAFYMRMNEDGKTVAATDLLVPGI------GELIGGSQREERMDVLVDR 403

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 404 IKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|323342177|ref|ZP_08082410.1| asparagine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464602|gb|EFY09795.1| asparagine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 460

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 49/345 (14%), Positives = 102/345 (29%), Gaps = 35/345 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ E+F    F+ + +  +  +          F     
Sbjct: 129 AHLRVRTNSFMAVFRVRSVLSMAIHEFFQNQGFVYVHTPVITGNDAEGAGEA--FVVTTR 186

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLE 121
                 K  +     L  S +   +    A    ++ F   +R        H  EF M+E
Sbjct: 187 DDAKYEKDFFGKKASLTVSGQLHAEAFALA-FRDVYTFGPTFRAENSNTARHASEFWMVE 245

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E  M    ++++   E                F+E    T+ E      + +
Sbjct: 246 PEIAFADLEDNMNLIEDLVKYCIEYV----LENAPEEMKFFNERIDTTLLERLNELLSSE 301

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++   R  +   W           I   +       +  Y
Sbjct: 302 FKRMTYTE-------AVELLEKQNDRFEYKVEWGTDLQSEHERYISEEVVKGPV-FITDY 353

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P    +       D +     +L   ++       EL+   ++  R +   +  +++   
Sbjct: 354 PKEIKSFYMRLNEDGKTVAACDLLVPHV------GELVGGSQREERLDVLERRMEELDIP 407

Query: 302 TYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
              + E +L        + SG  +GF+R +M +T   NI +V+  
Sbjct: 408 KESL-EWYLDLRRYGGVKHSGFGIGFERFLMYITSMTNIRDVVPF 451


>gi|296333026|ref|ZP_06875483.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305674870|ref|YP_003866542.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296149877|gb|EFG90769.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305413114|gb|ADM38233.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 430

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 63/348 (18%), Positives = 111/348 (31%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F    F+++D   L   +P         
Sbjct: 114 MDHRHLWLRSK--RQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFATKYFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E+ ++   N +    +   +      N      S+ E I        Y    
Sbjct: 224 PEMAFVEFEENLQVQENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITY---- 279

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++ G     D  W D F       I  +   +    + RY
Sbjct: 280 -------------DEAIDFLKEKGFD---DIEWGDDFGAPHETAIAEHY--DKPVFITRY 321

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKKKIYN 300
           P           +D        +   ++       E++   E+ H  E  E + K+   +
Sbjct: 322 PTSLKPFYMQPASDRDDV----VLCADLIAPEGYGEIIGGSERIHDMELLEARLKEHGLD 377

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                    L         SG  +G +R V  ++GA ++ E I  P  
Sbjct: 378 SDAYKWYAELRK-YGSVPHSGFGLGLERTVAWISGAPHVRETIPFPRL 424


>gi|283768889|ref|ZP_06341799.1| asparagine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104442|gb|EFC05816.1| asparagine--tRNA ligase [Bulleidia extructa W1219]
          Length = 462

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 114/348 (32%), Gaps = 40/348 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++  +F E  F+ +++  +  +          F+    
Sbjct: 130 AHLRPRTNTLSAVFRVRSVLAMAIHTFFQEQGFVYVNTPIITGADAEGAGE--TFTVTTN 187

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             + + +  +     L  S +   +    A    ++ F   +R  E     H  EF M+E
Sbjct: 188 YGEKMEEDFFGKHASLTVSGQLQAEAFALA-FRDVYTFGPTFRAEESNTTTHAAEFWMIE 246

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E  M    ++++   +              N F+E    ++ E      +  
Sbjct: 247 PEMAFADLEYDMDVIEDMVKFCIDYV----MEMCPEEMNFFNERIDTSLLERLNHVRS-- 300

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTILDR 240
                    +          ++A ++  ++   W    +      +   +       L  
Sbjct: 301 -----TAFRRMSYTEAIEILKKADVKFENNQIEWGMDLNTEHERYLTDQVVKGPV-FLTD 354

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP    A       D +     +L    +       EL+   ++  R E   ++ K +  
Sbjct: 355 YPKEIKAFYMRENEDGKTVAATDLLVPTV------GELVGGSQREERLELLEKKMKDLG- 407

Query: 301 ETYPID--EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               +D  + +L        + +G  +GF+RLVM VTG  NI +VI  
Sbjct: 408 --MNLDNYQWYLDLRRYGGCEHAGFGLGFERLVMYVTGMKNIRDVIPF 453


>gi|229135391|ref|ZP_04264180.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648087|gb|EEL04133.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 463

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 113/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +              + F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYV----LEHAPEEMDFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGAEFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRMNEDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|16079293|ref|NP_390117.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310152|ref|ZP_03591999.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221314474|ref|ZP_03596279.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319396|ref|ZP_03600690.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323672|ref|ZP_03604966.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|321311705|ref|YP_004203992.1| asparaginyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|1711642|sp|P39772|SYN_BACSU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|1146247|gb|AAB38455.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2634654|emb|CAB14152.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|320017979|gb|ADV92965.1| asparaginyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 430

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 63/348 (18%), Positives = 111/348 (31%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F    F+++D   L   +P         
Sbjct: 114 MDHRHLWLRSK--RQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFATKYFDEDAYLSQSGQLYMEAAAMA-LGKVFSFGPTFRAEKSKTKRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E+ ++   N +    +   +      N      S+ E I        Y    
Sbjct: 224 PEMAFVEFEENLQVQENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITY---- 279

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++ G     D  W D F       I  +   +    + RY
Sbjct: 280 -------------DEAIEFLKEKGFD---DIEWGDDFGAPHETAIAEHY--DKPVFITRY 321

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKKKIYN 300
           P           +D        +   ++       E++   E+ H  E  E + K+   +
Sbjct: 322 PTSLKPFYMQPASDREDV----VLCADLIAPEGYGEIIGGSERIHDMELLESRLKEHGLD 377

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                    L         SG  +G +R V  ++GA ++ E I  P  
Sbjct: 378 SDAYKWYAELRK-YGSVPHSGFGLGLERTVAWISGAPHVRETIPFPRL 424


>gi|229175266|ref|ZP_04302781.1| Asparaginyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608098|gb|EEK65405.1| Asparaginyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 463

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 113/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSVAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQNL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +              + F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYV----LEHAPEEMDFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRMNEDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|52425097|ref|YP_088234.1| asparaginyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|59798508|sp|Q65TR1|SYN_MANSM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|52307149|gb|AAU37649.1| AsnS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 467

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/357 (16%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRDDKGAVDFSQDFFGKESFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++       ++    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFNAVLKE----RMDDLKFFEKHIDKDVINR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LERFVASDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERYLAEEHFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++     P D  +   L        SG  +GF+RL++ VTG  NI EVI  P +
Sbjct: 407 RMAEMGL--NPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRT 461


>gi|293396749|ref|ZP_06641025.1| asparagine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421013|gb|EFE94266.1| asparagine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 466

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 108/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +  EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFLHENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRDDKGAVDFSQDFFGKEAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  S + +     ++++   +    +    +  +   F+E       E 
Sbjct: 244 LAEFWMVEPEVAFASLDDVAGLAESMLKYVFQAVLDE----RADDMQFFAERVDKDAVER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D          +G    +  +W    S      +       
Sbjct: 300 LKRFVTSDFAQV-------DYTDAVEILLASGQTFENPVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R E+  
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDQRLEEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|229169285|ref|ZP_04296996.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614180|gb|EEK71294.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 463

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 113/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +              + F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYV----LEHAPEEMDFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGAEFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRMNEDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|77360557|ref|YP_340132.1| asparaginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|123588153|sp|Q3IGU4|SYN_PSEHT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|76875468|emb|CAI86689.1| asparaginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 465

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/359 (16%), Positives = 111/359 (30%), Gaps = 43/359 (11%)

Query: 13  DFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R  +       RN +  ++  ++ E  F+ I +  +  S       +   ST  
Sbjct: 123 HAHLRPRTNMIGAVTRVRNCLAQAIHRFYHEQGFLWISTPIITASDCEGAGEMFRVSTLD 182

Query: 67  -------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          +D   K  +L  S + + +   +A   KI+ F   +R        
Sbjct: 183 MQNLPLTDKGEVDYSEDFFGKEAFLTVSGQLNGETYASAMS-KIYTFGPTFRAENSNTSR 241

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E + K    +++   +   ++    +  +   F++    T   
Sbjct: 242 HLAEFWMVEPELAFADLEDIAKLAEQMLKYVFKAVLEE----RRDDMEFFAQRVEKTAIT 297

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
               +   D           D        +  G +  +   W           +      
Sbjct: 298 RLEEFVEKDFAQV-------DYTEAVEILKACGKKFEYAVEWGVDLQSEHERYLAEEHFK 350

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               I   YP    A       D +     ++ A  I       E++   ++  R +   
Sbjct: 351 APVVIK-NYPRDIKAFYMRQNEDGKTVAAMDIVAPGI------GEIIGGSQREERLDILD 403

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
               ++       D  +   L        SG  +GF+RLV  VTG  N+ +VI  P ++
Sbjct: 404 ARLDEMGL--NKDDYSWYRDLRKYGTVPHSGFGLGFERLVAYVTGMGNVRDVIAFPRTK 460


>gi|326427198|gb|EGD72768.1| aspartyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 535

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 120/351 (34%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ +    R++ ++  F EI S  +  +  +E+   
Sbjct: 209 NQDTRLDNRVLDLRAEPNQAIFKMQSGVCRLFRDFLLKEGFTEIHSPKIIGTA-SESGSS 267

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F  +     + +   +L  SP+   +  +AA   K+F     +R  +     H  EFT 
Sbjct: 268 VFKLQ-----YFKTQAFLAQSPQLYKQMCIAADMGKVFEIGPVFRAEDSNTHRHLTEFTG 322

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + + ++ +  +      + F+ +    N     E  T  E   R   
Sbjct: 323 LDMEMAFNEHYHEVLEVLDRLFISIFRGLSEQFAEEVEMVNKQFPREKFTWLEPTLRIEW 382

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            +  + L               ++AG  +   D  S    ++L   ++   G +   ILD
Sbjct: 383 PEAISML---------------REAGEEIGDFDDISTPQEKLLGRLVKAKYGTD-FYILD 426

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           PA+P ++  +++     E+ +    + DP     R          +
Sbjct: 427 KFPLCIRPFYTMPDPANPAYSNSYDIMMRGEEIMSGAQRVHDPKLLEER-----ALAHGL 481

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E       ++           G  +G +R+VML  G  NI +    P  
Sbjct: 482 SLEEIGP---YVDAFRYGCSPHGGGGVGLERVVMLFLGLPNIRKTSLFPRD 529


>gi|290473854|ref|YP_003466728.1| asparagine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289173161|emb|CBJ79934.1| asparagine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 466

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 111/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + S  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLSQALHRFFHEKGFFWVSSPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 QNLPRTDKGDVDFSKDFFGREAFLTVSGQLNGEAYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A      +      +++   + A ++    +  +   F+E     V   
Sbjct: 244 LAEFWMLEPEVAFADLNDIASLAEEMLKYVFKAALEE----RADDLAFFAERVDNEVVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ + D         Q D        +  G +  +   W    S      +       
Sbjct: 300 LEKFVDSDFI-------QLDYTDAIEILENCGQKFENPVFWGVDLSSEHERYLAEKHFEA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   Q
Sbjct: 353 PVIMK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDMLDQ 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +++       D  +   L        +G  +GF+RLV  VTG +N+ +VI  P +
Sbjct: 406 RMEEMDL--NKEDYWWYRDLRRYGTVPHAGFGLGFERLVAYVTGVSNVRDVIPFPRT 460


>gi|126466260|ref|YP_001041369.1| asparaginyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126015083|gb|ABN70461.1| asparaginyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 436

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 119/353 (33%), Gaps = 48/353 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           + ++  W R         +  ++ +  + REYFVEN + E+    L  S   G  T    
Sbjct: 120 LDNRHLWIRSRKLT--EIMKIKHSVLKAGREYFVENDWWEVTPPILTASAVEGGAT---- 173

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L    +  K  YL  S +   + L+ +  EK++    ++R  +     H  E+  L
Sbjct: 174 ----LFPVKYFDKTAYLSQSAQLYLEALIYS-LEKVWSLTTSFRAEKSRTRRHLAEYWHL 228

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A  + E +M+    ++    +                      +   +        
Sbjct: 229 EAEAAWYNMEDMMRVAEELVAYIVQYI--------------------LEHNKRQLEILGR 268

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL    ++ + P   + Y +A +   +   +  W D         +   +  +    +  
Sbjct: 269 DLKILKNSVEPPYPRIRYDEAIEILQKKGVNIEWGDDLGADEERVL--TMEFDKPFFITH 326

Query: 241 YPAPESALANI-YPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +P    +      P + +    F+L A     E+    +   D  +  +R  ++      
Sbjct: 327 FPKEIKSFYMKLDPENEKLALGFDLLAPEGYGEIIGGSEREDDYNKLLNRIIEQ------ 380

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            Y+      + +L          SG  +G +RLVM + G ++I +    P  +
Sbjct: 381 GYDPEDY--KWYLDLRKYGSVPHSGFGLGIERLVMWIAGLDHIRDATPFPRFR 431


>gi|295087515|emb|CBK69038.1| asparaginyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 447

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 106/344 (30%), Gaps = 31/344 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  YF E  F   ++  +  S       +    TEL 
Sbjct: 120 AHLRLRTNIFGAIFRMRHNMAFAIHRYFNERGFFYFNTPIITTSDSEGAGELFEVKTELK 179

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH 126
             D    P  L  S +   +    A    I+ F+  +R        H  EF M+E   A 
Sbjct: 180 D-DFFGSPANLTVSGQLEGELGALA-LGAIYTFSPTFRAENSNTFRHLSEFWMIEPEVAF 237

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
                 M    + ++     A +   S      +               +   +     +
Sbjct: 238 NDINDNMDLAEDFLKYLIRYALENCESDLAFLNDNVD-------NGLMDKLHFVANNEFM 290

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
             P      +L    +Q    V       D+ +      +E         I+  YP    
Sbjct: 291 RLPYSKAIEILQESGRQFDYPVKPGI---DLCAEHERHLVEE--YFRRPVIVTDYPKEIK 345

Query: 247 ALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           A       D +  +  ++    I E+    +   D  +   R ++     +K+       
Sbjct: 346 AFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYTKLLRRMKELNMNTEKL------- 398

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +L          SG  +GF+RL++ +TG  NI +VI  P +
Sbjct: 399 -WWYLESRKFGTVPHSGFGLGFERLMLFITGMTNIRDVIPFPRT 441


>gi|281206115|gb|EFA80304.1| aspartyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 566

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 108/332 (32%), Gaps = 32/332 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ +    REY   N F+EI +  +  S  +E+    F        +     YL
Sbjct: 259 QAIFRLQSAVGMLFREYLHSNNFVEIHTPKMISSA-SESGASVFK-----LGYFDTNAYL 312

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+F  +  + +  E+++     +R        H  EF  L+   +   +   + D +
Sbjct: 313 AQSPQFYKQMAICSDMERVYEIGPVFRAENSFTHRHLTEFVGLDIEMSFREHYHEVLDVL 372

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + + C+     +  F+ +          E         R+                    
Sbjct: 373 DNLMCSIFEGLETRFAKELETIKAQYGYEPFKFTRPSPRFT---------------FDEA 417

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
                + G  V  +D  +    ++L + I+   G++   I   Y           P +  
Sbjct: 418 AAMLNEIGETVVDND-INTTQEKLLGKIIKKKYGVDFYIIDKFYRTARPFYTMPDPNNEL 476

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
               ++L+    E+C+    + D      +  +E   K  I   +      ++       
Sbjct: 477 LANAYDLFMRGEEICSGAQRIHD-----AKMLEESAAKHGINIPSIQA---YIDAFKYGA 528

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +G  +G +R+VML  G  NI +    P  
Sbjct: 529 APHAGGGVGLERVVMLYLGIGNIRKTSMFPRD 560


>gi|284928615|ref|YP_003421137.1| asparaginyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809074|gb|ADB94779.1| asparaginyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 463

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 106/356 (29%), Gaps = 45/356 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R       +  RN    ++  +F E  F+ I++  +  +       +  F      
Sbjct: 123 HLRHRTNTLGAVIRIRNSCTMAIHNFFQEKGFLLINTPIITVNDCEGAGDL--FKITNFD 180

Query: 69  ---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          QD   KP YL  S +    +++A   + ++ F   +R        
Sbjct: 181 LCNIPKDKRGNVEYNQDFFGKPAYLTVSGQLEA-EVMAMTFQNVYTFGPTFRAENSNTSR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E         ++       + +      +   F++    TV E
Sbjct: 240 HLAEFWMVEPEMAFCDLEGNQDVAEEFLKY----VFKNVLKNCPEDMEFFNKYIDKTVLE 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              +  N          ++          + +  +  +   W           +   +  
Sbjct: 296 TAEKIIN-------KKFERITYTNAINLLENSNKQFNYKAEWGIDLQSEHERYLAEEVFK 348

Query: 233 NCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +   I+  YPA   A                 L+    E+               R E++
Sbjct: 349 SPV-IVTDYPATTKAFYMRLNDDRQTVAAMDILFPKIGEIIGGSQREERLNVLEERLEEQ 407

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               +   + ++ +D             SG  +GF+R+V  +TG  NI E I  P 
Sbjct: 408 NIITE---DLSWYLDLR----RYGTVPHSGFGLGFERMVQFMTGIKNIREAIPFPR 456


>gi|217962040|ref|YP_002340610.1| asparaginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229141286|ref|ZP_04269824.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|217068277|gb|ACJ82527.1| asparaginyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228642067|gb|EEK98360.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 463

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++   +                F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMNLTEDMLKYVMKYV----LEHAPEEMEFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+    E       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMKEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|322418305|ref|YP_004197528.1| asparaginyl-tRNA synthetase [Geobacter sp. M18]
 gi|320124692|gb|ADW12252.1| asparaginyl-tRNA synthetase [Geobacter sp. M18]
          Length = 460

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 100/358 (27%), Gaps = 46/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +   +  +F E  F+ + +  +  +       +   +T  +
Sbjct: 120 AHLRVRSNTFGAVFRVRSALAQEVHRFFAERGFLYVHTPIITANDCEGAGELFRVTTLDL 179

Query: 68  IQDHI-------RKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
               +        +  +     L  S +   +    A    I+ F   +R        H 
Sbjct: 180 AHPPLVNGEIDFSEDFFATATGLTVSGQLEGELFAQA-FSDIYTFGPTFRAENSNTARHA 238

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A              ++     A                           
Sbjct: 239 AEFWMIEPEMAFADLSDDADLAEAFLKRLCRFALDNCAEDMKF-------FNAQIDKGLI 291

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R   +       +  + D      + ++A +       W           +   +    
Sbjct: 292 ERIEGV----ARASFARMDYGEAIERLKKATVSFQFPVEWGLDLQSEHERYLTEQVVGGP 347

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             IL  YP    A       D +     +L    +       E++   ++  R E     
Sbjct: 348 VFIL-NYPKDIKAFYMRQNDDGKTVAAMDLLVPKV------GEIIGGSQREERLE----L 396

Query: 295 KKKIYNETYPIDE---DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++   ET    E    +L          +G  +GF+RL+M +TG  NI +V+  P +
Sbjct: 397 LEQRMLETGVAPESLSWYLDTRRWGSTPHAGFGLGFERLLMYLTGMENIRDVVPFPRT 454


>gi|313889924|ref|ZP_07823564.1| asparagine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121690|gb|EFR44789.1| asparagine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 448

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 116/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  S  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAIMQIRNAIIYSTYEFFDQNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  +++Q +      ++   +    +      +        +         +  + D 
Sbjct: 236 EYSFLNHDQSLDLQEAYVKALIQGVIDRAPQALEILERDVEALKR--YIAEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             TL    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AITLLQEHEADEDTDYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +   +  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDDYQALVAKMDALEMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|295105436|emb|CBL02980.1| Aspartyl/asparaginyl-tRNA synthetases [Faecalibacterium prausnitzii
           SL3/3]
          Length = 444

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 115/326 (35%), Gaps = 41/326 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               ++   +++R++ ++  FIEI +  L  +  +E+    F       D+  +  YL  
Sbjct: 142 MFKAQSCFVNAMRKFLLDRNFIEIHTPKLI-AAASESGSEVFKV-----DYFDRNAYLAQ 195

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+F  +  +AAG E+IF     +R  +     H  EF+  +   ++ +  + +      
Sbjct: 196 SPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHATEFSGFDLEFSYITSFKDVMKMEEE 255

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +  A   A +                   +  E       +++              LY 
Sbjct: 256 LLTAGLQAVKD------------------SYGEQIKELFGLEVIVPTTPFPVVKLADLYK 297

Query: 200 QAQQAGIRVAHDDTWSDI---FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
             ++       +    D+     R+  + ++ + G      +  Y A + A  ++   + 
Sbjct: 298 ALEEEFGYTVDESEKGDLTTEAERLSYDWVKKHYGHE-FLFITDYSAEKRAFYHMRDEN- 355

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
              + ++L    +E+            +    +K+ +EK    +      + +L      
Sbjct: 356 GVPQGYDLIWRGVEITTGAQREH----RYEVLKKQAEEKGLADDV-----KFYLEFFQYG 406

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINE 341
            P   G  +G DRL ML+ G  +I +
Sbjct: 407 CPPHGGFGLGIDRLTMLLCGL-SIKD 431


>gi|42783731|ref|NP_980978.1| asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|59798564|sp|Q72ZI3|SYN_BACC1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|42739661|gb|AAS43586.1| asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 463

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 112/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +                F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|213852475|ref|ZP_03382007.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 466

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 106/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E   +    +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFADLEDNARLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAIAR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G    +   W    S      +       
Sbjct: 300 LERFVSTDFAQV-------DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPKEIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMAEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|16764360|ref|NP_459975.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167552996|ref|ZP_02346746.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167993358|ref|ZP_02574452.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168243771|ref|ZP_02668703.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168264670|ref|ZP_02686643.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|194443471|ref|YP_002040200.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194450065|ref|YP_002044994.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197249609|ref|YP_002145920.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|200390273|ref|ZP_03216884.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|20139879|sp|P58696|SYN_SALTY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|16419513|gb|AAL19934.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|194402134|gb|ACF62356.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408369|gb|ACF68588.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197213312|gb|ACH50709.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|199602718|gb|EDZ01264.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205322466|gb|EDZ10305.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205328543|gb|EDZ15307.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205337229|gb|EDZ23993.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205346905|gb|EDZ33536.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|261246216|emb|CBG24020.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992741|gb|ACY87626.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157543|emb|CBW17033.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911986|dbj|BAJ35960.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|323129266|gb|ADX16696.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332987891|gb|AEF06874.1| DNA-binding transcriptional regulator AsnC [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 466

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 105/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E   +    +++       ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFADLEDNARLAEAMLKYVFNAVLEE----RADDMKFFAERVDKDAIAR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G    +   W    S      +       
Sbjct: 300 LERFVSTDFAQV-------DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPKEIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMAEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|229076061|ref|ZP_04209029.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|229099019|ref|ZP_04229953.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229118050|ref|ZP_04247409.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665273|gb|EEL20756.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228684247|gb|EEL38191.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228706924|gb|EEL59129.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 463

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 113/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVSKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +              + F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYV----LEHAPEEMDFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    I       EL+   ++  R +  ++
Sbjct: 349 RPVFVTDYPKDIKAFYMRMNEDGKTVAATDLLVPGI------GELIGGSQREERMDVLVE 402

Query: 294 -EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|319744609|gb|EFV96959.1| asparagine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 448

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  S  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  KP +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGKPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +     ++        +         +  + D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKR--YIAEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             TL    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AITLLQEHEADEDTDYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++   
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDNYDALVAKMDELGMA 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEYD-FYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|288801458|ref|ZP_06406911.1| asparagine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331669|gb|EFC70154.1| asparagine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 467

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 109/359 (30%), Gaps = 38/359 (10%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
            +  H R R       +  R+ +  ++ +YF E+ F    +  +  S       +   +T
Sbjct: 120 RQHAHLRLRTNSFGAVMRIRHNMAIAIHQYFHEHGFYYFHTPIITASDAEGAGEMFQVTT 179

Query: 65  --------ELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
                   +           +     L  S +   +    A   +I+ F   +R      
Sbjct: 180 KNLYDLKKDDEGHITYNDDFFGKMTSLTVSGQLEGELGATA-LGQIYTFGPTFRAENSNT 238

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF M+E   A     +LM    + I+     A          +    ++    T+
Sbjct: 239 PRHLAEFWMIEPEVAFIDLNELMDLEEDFIKHCVRWA----LEHCKEDLEFLNKMVDKTL 294

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            E        D               L  +A + G +     +W    +      +  + 
Sbjct: 295 LERLEGVVKEDFVRLTYTEGIE----LLEKAVKEGHKFEFPVSWGMDLASEHERYLVEHY 350

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                 +   YP    A       D +  +  ++    I       E++    +   ++K
Sbjct: 351 FKKPVIMC-DYPKDIKAFYMKINEDGKTVQGTDVLFPQI------GEIIGGSVREESYDK 403

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + E +        +   +L           G  +GF+RL++ VTG  NI +VI  P +
Sbjct: 404 LVNEIETRGIPMKDM-WWYLDTRKYGSCPHGGFGLGFERLILFVTGMQNIRDVIPFPRT 461


>gi|271500177|ref|YP_003333202.1| asparaginyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270343732|gb|ACZ76497.1| asparaginyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 466

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 112/360 (31%), Gaps = 49/360 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F +N F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFHQNGFYWVSTPIITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRDDQGKVDFSEDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + + +     N+++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMIEPEVAFATLDDVAALAENLLKFVFKAVLEE----RADDMKFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G    +  +W    S      +       
Sbjct: 300 LERFVTSDFAQV-------DYTDAITILENCGQTFENPVSWGIDLSSEHERYLAEKH-FQ 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              ++  YP    A       D +             L     E++   ++  R E ++ 
Sbjct: 352 APVVVKNYPKDIKAFYMRMNNDGKTVAAM------DVLAPGIGEIIGGSQREERLE-QLD 404

Query: 294 EKKKIYNETYPI---DEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +     E   +   D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 405 IR----LEEMGLSKEDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|30264628|ref|NP_847005.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530098|ref|YP_021447.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187449|ref|YP_030701.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|52140949|ref|YP_085881.1| asparaginyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65321925|ref|ZP_00394884.1| COG0017: Aspartyl/asparaginyl-tRNA synthetases [Bacillus anthracis
           str. A2012]
 gi|165871453|ref|ZP_02216100.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635590|ref|ZP_02393902.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641599|ref|ZP_02399846.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170688249|ref|ZP_02879459.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170708691|ref|ZP_02899129.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177653163|ref|ZP_02935450.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190566877|ref|ZP_03019793.1| asparaginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196042100|ref|ZP_03109384.1| asparagine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196044950|ref|ZP_03112184.1| asparaginyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218905785|ref|YP_002453619.1| asparaginyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225866533|ref|YP_002751911.1| asparaginyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817342|ref|YP_002817351.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917197|ref|ZP_04080754.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228929605|ref|ZP_04092623.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935868|ref|ZP_04098678.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948283|ref|ZP_04110566.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229093653|ref|ZP_04224753.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229124124|ref|ZP_04253316.1| Asparaginyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229603957|ref|YP_002868837.1| asparagine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254686949|ref|ZP_05150807.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254724513|ref|ZP_05186296.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736666|ref|ZP_05194372.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741704|ref|ZP_05199391.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254754699|ref|ZP_05206734.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757531|ref|ZP_05209558.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|38258300|sp|Q81L32|SYN_BACAN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|59798502|sp|Q633N6|SYN_BACCZ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|30259286|gb|AAP28491.1| asparagine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505246|gb|AAT33922.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49181376|gb|AAT56752.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|51974418|gb|AAU15968.1| asparagine--tRNA ligase (asparaginyl-tRNA synthetase) [Bacillus
           cereus E33L]
 gi|164712750|gb|EDR18280.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510484|gb|EDR85883.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529010|gb|EDR91765.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170126371|gb|EDS95260.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170667755|gb|EDT18508.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172081687|gb|EDT66758.1| asparaginyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190561868|gb|EDV15837.1| asparaginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196024438|gb|EDX63111.1| asparaginyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196027036|gb|EDX65659.1| asparagine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218535284|gb|ACK87682.1| asparaginyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225786582|gb|ACO26799.1| asparagine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227004623|gb|ACP14366.1| asparagine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228659426|gb|EEL15074.1| Asparaginyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228689740|gb|EEL43547.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228811270|gb|EEM57608.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823636|gb|EEM69458.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829992|gb|EEM75611.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842398|gb|EEM87489.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229268365|gb|ACQ50002.1| asparagine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 463

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 112/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +                F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|257066687|ref|YP_003152943.1| asparaginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798567|gb|ACV29222.1| asparaginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 462

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 113/363 (31%), Gaps = 40/363 (11%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
                R    R     R+++  SL ++F E  F+ ++   +  S       +   +T   
Sbjct: 119 PHLRARTNTYRAVFRVRSILAYSLHKFFQERGFLYVNPPIVTSSDAEGAGEMFNITTIDP 178

Query: 65  ----------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K  YL  S +   +    A    ++ F   +R  E     H
Sbjct: 179 EDAPRNKDGSVDYSKDFFSKKSYLTVSGQLEAEDYALA-FGDVYTFGPTFRAEESNTPRH 237

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A   Y   M    ++I+ +                N F+      + E 
Sbjct: 238 AAEFWMLEPEMAFTDYNLAMDVAEDMIKYSINYL----LENAPDEMNFFNTWIDKGLIER 293

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             +  + +                    Q+ G +      W           +   +   
Sbjct: 294 LEKVRDAEFARVTYT-------KAIELLQECGEKFEFPVEWGIDLQTEHERYLSEKIVGG 346

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +    F++    +       EL+   ++  R+++  +
Sbjct: 347 PV-FVTDYPKNIKAFYMKRNDDGKTVAAFDMLVPGV------GELIGGSQREERYDELYK 399

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF-SQSN 351
             ++         E++L          SG  +GF+R VM VTG  NI +V+  P   ++ 
Sbjct: 400 SMEENGLNPEEY-ENYLDLRRFGTVVHSGFGLGFERAVMYVTGMKNIRDVLAYPRYVRAF 458

Query: 352 QEE 354
            ++
Sbjct: 459 ADK 461


>gi|228941737|ref|ZP_04104284.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228974661|ref|ZP_04135227.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981255|ref|ZP_04141555.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778455|gb|EEM26722.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785064|gb|EEM33077.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817949|gb|EEM64027.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326942342|gb|AEA18238.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 463

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 113/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGKVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +              + F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYV----LEHAPEEMDFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRMNEDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|218283447|ref|ZP_03489447.1| hypothetical protein EUBIFOR_02037 [Eubacterium biforme DSM 3989]
 gi|218215829|gb|EEC89367.1| hypothetical protein EUBIFOR_02037 [Eubacterium biforme DSM 3989]
          Length = 451

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 101/349 (28%), Gaps = 34/349 (9%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI--RAFSTEL 66
                R          R+++  ++  +F +  F+ +++       GN+       F+   
Sbjct: 119 PHVRPRANTYYAMFRLRSVLSMAIHTFFQDRGFVYVNTP---EITGNDAEGAGECFTVTT 175

Query: 67  IIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
                  K  +     L  S +   +    A    ++ F   +R        H  EF M+
Sbjct: 176 REDAKYDKDFFGKHAQLTVSGQLHVEPFALAY-RNVYTFGPTFRAENSNTTRHASEFWMI 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A       M     +I+       +                  +   E   R  ++
Sbjct: 235 EPELAFADLADNMDCIEEMIKYCINYCLEHAKEEMEF-------FASMIDKECIKRVTHV 287

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
              +            L     Q       D  W           I     +N    L  
Sbjct: 288 ANSSFERMTYTKAIEYLEKAKDQFE---NQDIFWGMDLQSEHERYICEK-VVNGPVFLTD 343

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP    A       D +     +L    +       EL+   ++  R++  +   K++  
Sbjct: 344 YPKDIKAFYMRINDDNKTVAACDLLVPYV------GELVGGSQREERYDVLVNRMKEMGM 397

Query: 301 ETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E   +     L       + SG  +GFDR++M ++G  NI +V   P +
Sbjct: 398 EQETLQWYLDLRRFGGC-KHSGFGLGFDRMLMYLSGVANIRDVQPYPRT 445


>gi|118418931|gb|ABK87350.1| asparagine--tRNA ligase [Bacillus thuringiensis str. Al Hakam]
          Length = 475

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 112/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 134 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 193

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 194 NNVPKDEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 252

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +                F+     TV E 
Sbjct: 253 AAEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVLER 308

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 309 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 360

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 361 RPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 414

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 415 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 469


>gi|30022634|ref|NP_834265.1| asparaginyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206969927|ref|ZP_03230881.1| asparaginyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228923302|ref|ZP_04086590.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228954827|ref|ZP_04116847.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228960827|ref|ZP_04122462.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229048266|ref|ZP_04193834.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229072060|ref|ZP_04205269.1| Asparaginyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229081811|ref|ZP_04214303.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229129842|ref|ZP_04258808.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147117|ref|ZP_04275476.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229180877|ref|ZP_04308212.1| Asparaginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|229192759|ref|ZP_04319717.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|296505034|ref|YP_003666734.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|38258297|sp|Q817I8|SYN_BACCR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|29898192|gb|AAP11466.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206735615|gb|EDZ52783.1| asparaginyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228590598|gb|EEK48459.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228602434|gb|EEK59920.1| Asparaginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228636366|gb|EEK92837.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653533|gb|EEL09405.1| Asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228701399|gb|EEL53893.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228710994|gb|EEL62960.1| Asparaginyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228722991|gb|EEL74368.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228798849|gb|EEM45828.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804816|gb|EEM51415.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228836256|gb|EEM81609.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296326086|gb|ADH09014.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 463

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 111/359 (30%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +  F     
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEM--FRVTTQ 179

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +++ K            +     L  S + + +    A    ++ F   +R       
Sbjct: 180 DLNNLPKGEDGKVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTT 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      +M    ++++ A +                F+     TV 
Sbjct: 239 RHAAEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N D G                  Q++G    +   W           +   + 
Sbjct: 295 ERMNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI- 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    I       EL+   ++  R +  
Sbjct: 347 FKRPVFVTDYPKDIKAFYMRLNEDGKTVAATDLLVPGI------GELIGGSQREERMDVL 400

Query: 292 M-QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 401 VDRIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|325478591|gb|EGC81703.1| asparagine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 462

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 62/355 (17%), Positives = 113/355 (31%), Gaps = 39/355 (10%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
                R    R     R+++  +L  +F E  F+ I+   +  S       +   +T   
Sbjct: 119 PHLRARTNTYRAVFRVRSVLAYALHNFFQERGFVYINPPIVTASDAEGAGEMFNITTIDA 178

Query: 65  ----------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K  YL  S +   +    A    ++ F   +R  E     H
Sbjct: 179 NDPPRKEDGSVDYSKDFFSKKSYLTVSGQLEAEDYALA-FGDVYTFGPTFRAEESNTPRH 237

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A   Y   M    ++I+ A +                F++     + E 
Sbjct: 238 AAEFWMLEPEMAFTDYNLAMDVAEDMIKYAIDHL----LKNAPDEMEFFNKWIDEGLIER 293

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             +  + D                    Q++G +      W           +   + I+
Sbjct: 294 LEKLRDADFARVTYT-------KAIELLQESGEKFEFPVEWGIDLQTEHERYLSEKI-ID 345

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +    F++    +       EL+   ++  R+E+  Q
Sbjct: 346 GPVFVTDYPKNIKAFYMKRNDDGKTVAAFDMLVPGV------GELIGGSQREERYEELYQ 399

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             ++   +     +++L          SG  +GF+R VM VTG  NI +V+  P 
Sbjct: 400 SMEENGLKPEEY-QNYLDLRRFGTVVHSGFGLGFERAVMYVTGMKNIRDVLAYPR 453


>gi|317491485|ref|ZP_07949921.1| asparaginyl-tRNA synthetase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316921032|gb|EFV42355.1| asparaginyl-tRNA synthetase [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 466

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 104/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  YF EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRYFHENGYFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDEGKVDFGEDFFGREAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +      +++   +    +    +  +   F++       + 
Sbjct: 244 LAEFWMVEPEVAFADLNDIAGVAEGMLKYVFQAVLDE----RADDMEFFAQRVDKDAIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D           G    +   W    S      +       
Sbjct: 300 LKRFVTSDFAQV-------DYTEAVEILLNCGKTFENPVYWGVDLSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDMLDA 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLEEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|206977721|ref|ZP_03238612.1| asparaginyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|222098023|ref|YP_002532080.1| asparaginyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229198708|ref|ZP_04325407.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1293]
 gi|206744022|gb|EDZ55438.1| asparaginyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|221242081|gb|ACM14791.1| asparaginyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228584784|gb|EEK42903.1| Asparaginyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 463

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 111/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +                F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+    E       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMKEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|229105186|ref|ZP_04235835.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678112|gb|EEL32340.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 463

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 113/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVSKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +              + F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYV----LEHAPEEMDFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRMNEDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|154495948|ref|ZP_02034644.1| hypothetical protein BACCAP_00229 [Bacteroides capillosus ATCC
           29799]
 gi|150274831|gb|EDN01887.1| hypothetical protein BACCAP_00229 [Bacteroides capillosus ATCC
           29799]
          Length = 475

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 109/359 (30%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++  +F +  F+ + +  +  S       +  F    +
Sbjct: 134 AHLRPRTNLFSAAFRVRSVAAHAIHTFFQDRGFVYVHTPIITASDCEGAGEM--FRVTTL 191

Query: 68  IQDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +++           +  +     L  S + + +    A    ++ F   +R  +    
Sbjct: 192 DMENLPKKDDGTVDYSQDFFGKSANLTVSGQLNAENFAMA-FGNVYTFGPTFRAEKSNTT 250

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M     +I+       +K         N F+      + 
Sbjct: 251 RHAAEFWMIEPEMAFCDLAGDMDVAEAMIKHIINTVMEKC----PDEMNFFNSFVDKGLK 306

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E     A+ D G                  +Q   +  +   W           +   + 
Sbjct: 307 ERLEHVASSDFGRVTYTE-------AVELLKQNNDKFDYKVEWGCDLQTEHERYLTEQIF 359

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                 +  YP    A       D +     +     I       E++   ++  R +  
Sbjct: 360 KKPV-FVTDYPREIKAFYMRLNDDGKTVAAADCLVPGI------GEIIGGSQREERLDVL 412

Query: 291 EMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E + K+   N        +L        + +G  +GF+R+VM +TG  NI +V+  P +
Sbjct: 413 EARIKELGMNPEDY--WWYLDLRRYGGCKHAGFGLGFERMVMYLTGIGNIRDVLPHPRT 469


>gi|282890093|ref|ZP_06298625.1| hypothetical protein pah_c012o020 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500021|gb|EFB42308.1| hypothetical protein pah_c012o020 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 465

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 101/357 (28%), Gaps = 45/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  +   +F +  F+ I +  +  S        + F    +
Sbjct: 124 AHLRPRTNTLGAVARIRNALSFATHLFFQKKGFLYIHTPIITSSDCEGAG--KMFRVSTL 181

Query: 68  IQDHIR---------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             D +                KP YL  S +   +   +A    I+ F   +R       
Sbjct: 182 DPDALPRTKEGKVDYSKDFFEKPTYLTVSGQLEGEIYASA-LSDIYTFGPTFRAENSNTS 240

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M      ++   +            + + F++     + 
Sbjct: 241 RHLAEFWMIEPEMAFADINDDMDCAEEYLKYTVKYV----LEHCEEDIDFFNQYVSPGLR 296

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N          ++          ++A     +   W           +     
Sbjct: 297 ERLEHIVN-------TPFERASYSYAVRILEKANKPFEYPVKWGSDLQSEHERFLAEEYF 349

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                I+  YP    +       D +     ++    I       +  D ++   +   E
Sbjct: 350 SKPV-IITDYPKEIKSFYMRLNDDEKTVAAMDVLVPRIGEIIGGSQREDRLDYLKQRLIE 408

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              K++ Y         +L          +G  +GF+RLV  VTG  NI + I  P 
Sbjct: 409 NNLKEEDY-------WWYLDLRKYGSVPHAGFGLGFERLVQFVTGIENIRDAIPFPR 458


>gi|229032204|ref|ZP_04188177.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228728984|gb|EEL79987.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 463

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 112/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSVAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +                F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRMNEDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|22536704|ref|NP_687555.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25010641|ref|NP_735036.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76787521|ref|YP_329308.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76799395|ref|ZP_00781548.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77413700|ref|ZP_00789883.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|54039684|sp|P67574|SYN_STRA5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|54042045|sp|P67573|SYN_STRA3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123602188|sp|Q3K2E5|SYN_STRA1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|22533546|gb|AAM99427.1|AE014216_3 asparaginyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|23094995|emb|CAD46216.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76562578|gb|ABA45162.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|76585247|gb|EAO61852.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77160245|gb|EAO71373.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 448

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  S  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  KP +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGKPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +     ++        +         +  + D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKR--YIAEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             TL    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AITLLQEHEADEDTDYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDDYDALVAKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEYD-FYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|213403358|ref|XP_002172451.1| cytoplasmic aspartate-tRNA ligase Drs1 [Schizosaccharomyces
           japonicus yFS275]
 gi|212000498|gb|EEB06158.1| cytoplasmic aspartate-tRNA ligase Drs1 [Schizosaccharomyces
           japonicus yFS275]
          Length = 579

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 56/361 (15%), Positives = 112/361 (31%), Gaps = 43/361 (11%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
             D     R               +  I  + R+Y + ++F EI +  +   S    ++ 
Sbjct: 233 LLDTRLDNRVLDLRTPTNQAIFQIQAGICRAFRDYLLNSKFTEIHTPKMTGASSEGGSN- 291

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 +    +     YL  SP+   + L+AA  +++F     +R  E     H  EFT
Sbjct: 292 ------VFSIKYFNSTGYLSQSPQLYKQMLIAADFDRVFEIGPVFRAEESNTYRHMTEFT 345

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY--ITVAEAFAR 176
            L+   A + +   +   +  +        +  +S Q          E   I        
Sbjct: 346 GLDLEMAFDEHYHEVMGFIENLFLHIFRVLKTEYSEQVAIVRRQYPSEDFLIPDQAPLRF 405

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI---FSRILIEKIEPNLGIN 233
           +    +        +          ++   R   D  + D+     R+L   I      +
Sbjct: 406 HFKEAIALLKGAGYRQQLEPGKEIPKEDEFRYVKDPDFEDLSTPEERVLGAIIREKHNTD 465

Query: 234 CCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
              ++D+YPA          P DPR++  ++ +    E+ +    + DP     R     
Sbjct: 466 -FYVIDKYPASARPFYTMPDPEDPRYSNSYDFFMKGQEIMSGAQRIHDPELLVERMN--- 521

Query: 293 QEKKKIYNETYPID----EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                       +D    +D++          +G  +G +R++M      NI      P 
Sbjct: 522 ---------ALGVDPNGLKDYIDAFRLGCVPHAGGGIGLERVLMFYLNLPNIRLASAFPR 572

Query: 348 S 348
            
Sbjct: 573 D 573


>gi|218899713|ref|YP_002448124.1| asparaginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228903076|ref|ZP_04067213.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228910382|ref|ZP_04074197.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228967656|ref|ZP_04128677.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|218544920|gb|ACK97314.1| asparaginyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228792032|gb|EEM39613.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228849148|gb|EEM93987.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228856562|gb|EEN01085.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 463

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 113/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +              + F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYV----LEHAPEEMDFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRMNEDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|88859211|ref|ZP_01133851.1| asparaginyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88818228|gb|EAR28043.1| asparaginyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 465

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 104/360 (28%), Gaps = 45/360 (12%)

Query: 13  DFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R  +       RN +  ++  ++ E  F+ I +  +  S       +   ST  
Sbjct: 123 HAHLRPRTNMIGAVTRVRNCLAQAIHRFYHERGFLWISTPIITASDCEGAGEMFRVSTLD 182

Query: 67  -------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          +D   K  +L  S + + +   +A    I+ F   +R        
Sbjct: 183 MQNLPRDDKGNVDYSEDFFGKEAFLTVSGQLNGETYCSAMS-NIYTFGPTFRAENSNTSR 241

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A      + K   ++++        +    +  +   F+E    T   
Sbjct: 242 HLAEFWMVEPEVAFADLNDIAKLAEDMLKYVFSAVLAE----RRDDMEFFAERVEKTAIS 297

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
               +   D           D        +  G +      W           +      
Sbjct: 298 RLESFVEKDFAQV-------DYTDAIEILKNCGKKFEFAVEWGVDLQSEHERYLAEVHFE 350

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               I   YP    A       D +     ++ A  I E+               R E+ 
Sbjct: 351 APVVIK-NYPKDIKAFYMRQNEDGKTVAAMDVVAPGIGEIIGGSQREERLDILDARLEEM 409

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              K          D  +   L        SG  +GF+RLV  VTG  N+ +VI  P ++
Sbjct: 410 GLNKD---------DYSWYRDLRKYGTVPHSGFGLGFERLVAYVTGMGNVRDVIAFPRTK 460


>gi|196034320|ref|ZP_03101729.1| asparaginyl-tRNA synthetase [Bacillus cereus W]
 gi|218232058|ref|YP_002369357.1| asparaginyl-tRNA synthetase [Bacillus cereus B4264]
 gi|195992862|gb|EDX56821.1| asparaginyl-tRNA synthetase [Bacillus cereus W]
 gi|218160015|gb|ACK60007.1| asparagine--tRNA ligase [Bacillus cereus B4264]
          Length = 463

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 111/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDETKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +                F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|312090413|ref|XP_003146606.1| aspartyl-tRNA synthetase [Loa loa]
 gi|307758228|gb|EFO17462.1| aspartyl-tRNA synthetase [Loa loa]
          Length = 576

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 110/350 (31%), Gaps = 45/350 (12%)

Query: 13  DFHYRRRPFLLKRNMIQSSL-----------REYFVENQFIEIDSMSLQYSPGNETHIRA 61
           D     R  L  R     ++           R    +  F+EI +  +  +  +E     
Sbjct: 252 DTRLDNR-VLDLRTQTSHAIFSIQDGVCELFRNTLKKRGFMEIHTPKIISAA-SEGGANV 309

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
           F              YL  SP+   +  +AA  +++F     +R  +     H  EF  L
Sbjct: 310 FEVSYFKGSA-----YLAQSPQLYKQMAIAADFDRVFTIGAVFRAEDSNTHRHLTEFVGL 364

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   A + +   + + +  +              +++      E E +        +  +
Sbjct: 365 DIEMAFKFHYHEVLEMIAAVMIDIF---------KDLKAKFKYEIETVGKQYPCEPFEFV 415

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           +    L   D           ++ G+ +  +D  S    R L   ++     +   +LDR
Sbjct: 416 EPAVILKYSD------AVKLLRENGVEIGDEDDLSTPVERFLGRLVKEKYHTD-FYVLDR 468

Query: 241 YPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YP             D +++  ++++    E+ +    + D      R      +  +I 
Sbjct: 469 YPLAVRPFYTMPDAKDSKYSNSYDMFMRGEEILSGAQRIHDASLLTER-----AKHHQID 523

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E       ++       P  +G  +G +R+ ML  G  N+      P  
Sbjct: 524 LEKI---RAYIDSFKYGCPPHAGGGIGLERVTMLFLGLGNVRLASLFPRD 570


>gi|154686483|ref|YP_001421644.1| asparaginyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166231657|sp|A7Z5Y7|SYN_BACA2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|154352334|gb|ABS74413.1| AsnS [Bacillus amyloliquefaciens FZB42]
          Length = 430

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 106/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F+++D   L   +P         
Sbjct: 114 MDHRHLWLRSK--RQHAIMKIRNEIIRATYEFFNKEGFVKVDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFATKYFDEDAFLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E+ ++   N +    +   +      N      S+ E I        Y    
Sbjct: 224 PEMAFVEFEENLEVQENYVAYIVQSVLEHCKIELNTLGRDTSKLEQIKAPFPRITY---- 279

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++ G     D  W D F       I  +   +    +  Y
Sbjct: 280 -------------DKAIEFLKEKGFD---DIEWGDDFGAPHETAIAESY--DKPVFITHY 321

Query: 242 PAPESALANIYPADPR----FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           P            D                   +    + + D      R ++       
Sbjct: 322 PTSLKPFYMQPAKDRDDVVLCADLIAPEGYGEIIG-GSERVHDMDLLEERLKE-----HG 375

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + ++ Y    +           SG  +G +R V  ++GA ++ E I  P  
Sbjct: 376 LDSDAYKWYAELRQ--YGSVPHSGFGLGLERTVAWISGAPHVRETIPFPRL 424


>gi|77405446|ref|ZP_00782539.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77175939|gb|EAO78715.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 448

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  S  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  KP +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGKPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +     ++        +         +  + D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKR--YIAEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             TL    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AITLLQEHEADEDTDYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDDYDALVAKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEYD-FYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|160945374|ref|ZP_02092600.1| hypothetical protein FAEPRAM212_02896 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443105|gb|EDP20110.1| hypothetical protein FAEPRAM212_02896 [Faecalibacterium prausnitzii
           M21/2]
          Length = 444

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 115/326 (35%), Gaps = 41/326 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               ++   +++R++ ++  FIEI +  L  +  +E+    F       D+  +  YL  
Sbjct: 142 MFKAQSCFVNAMRKFLLDRNFIEIHTPKLI-AAASESGSEVFKV-----DYFDRNAYLAQ 195

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+F  +  +AAG E+IF     +R  +     H  EF+  +   ++ +  + +      
Sbjct: 196 SPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHATEFSGFDLEFSYITSFKDVMKMEEE 255

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +  A   A +                   +  +       +++              LY 
Sbjct: 256 LLTAGLQAVKD------------------SYGDQIKELFGLEVIVPTTPFPVVKLADLYK 297

Query: 200 QAQQAGIRVAHDDTWSDI---FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
             ++       +    D+     R+  + ++ + G      +  Y A + A  ++   + 
Sbjct: 298 ALEEEFGYTVDESEKGDLTTEAERLSYDWVKKHYGHE-FLFITDYSAEKRAFYHMRDEN- 355

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
              + ++L    +E+            +    +K+ +EK    +      + +L      
Sbjct: 356 GVPQGYDLIWRGVEITTGAQREH----RYEVLKKQAEEKGLADDV-----KFYLEFFQYG 406

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINE 341
            P   G  +G DRL ML+ G  +I +
Sbjct: 407 CPPHGGFGLGIDRLTMLLCGL-SIKD 431


>gi|153878039|ref|ZP_02004462.1| Lysyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152065497|gb|EDN65538.1| Lysyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 185

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 70/192 (36%), Positives = 103/192 (53%), Gaps = 8/192 (4%)

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
              S  E I+    F +Y  +       +P Q     L     Q G+R  +         
Sbjct: 1   MHTSPAERISYCAVFEQYTGL-------HPLQSSLIDLQNYVSQFGLRELNRLERDTCLQ 53

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            IL  +IEP LG    T++  +PA ++ALA     +P+  +RFE+Y   IEL N   EL 
Sbjct: 54  LILSHQIEPQLGKTGPTVITDFPASQAALARKRKDNPQLAERFEVYLQGIELANGFYELT 113

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           DPIEQR RFE+++ ++K +   TYP+DE FLA L   +P  +G+A+G DRL+ML+ GA++
Sbjct: 114 DPIEQRQRFEQDLAKRKTLNLPTYPLDERFLAALTAGLPDCAGVALGLDRLLMLIIGASH 173

Query: 339 INEVIWTPFSQS 350
           I EV+  P  +S
Sbjct: 174 IREVLAFPIDKS 185


>gi|170726573|ref|YP_001760599.1| asparaginyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|169811920|gb|ACA86504.1| asparaginyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 466

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 111/357 (31%), Gaps = 45/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       RN +  ++  ++ E  FI + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNIIGAVARVRNSLSQAIHRFYNEEGFIWVSTPLITASDCEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +   +A   K++ F   +R        H
Sbjct: 185 ENLPRTDEGKVDYSEDFFGKESFLTVSGQLNAETYASA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + +      +++   +   ++    +  +   F++    TV E 
Sbjct: 244 LAEFWMVEPEVAFADLDDVAGLAEQMLKFCFKAVLEE----RRDDLEFFAQRVDKTVIER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D           D        +  G +  +D  W           +       
Sbjct: 300 LESFVNSDFAQV-------DYTDAVEILKNCGKKFEYDVEWGIDLQSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R E+  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGAQREERLEVLDARLEEMN 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             K+         D  +   +        SG  +GF+RLV  VTG +NI +VI  P 
Sbjct: 412 LSKE---------DYWWYRDMRRYGTVPHSGFGLGFERLVSYVTGVSNIRDVIPFPR 459


>gi|16759869|ref|NP_455486.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142358|ref|NP_805700.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56413951|ref|YP_151026.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|168233422|ref|ZP_02658480.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168237106|ref|ZP_02662164.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168466597|ref|ZP_02700459.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168822065|ref|ZP_02834065.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194470581|ref|ZP_03076565.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194734630|ref|YP_002114055.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197362874|ref|YP_002142511.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198243330|ref|YP_002214926.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205352207|ref|YP_002226008.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856391|ref|YP_002243042.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213162084|ref|ZP_03347794.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213424614|ref|ZP_03357397.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213581037|ref|ZP_03362863.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213612501|ref|ZP_03370327.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|238913227|ref|ZP_04657064.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289823917|ref|ZP_06543517.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|17433736|sp|Q56112|SYN_SALTI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|81360282|sp|Q5PGF0|SYN_SALPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|25293063|pir||AF0616 asparagine-tRNA ligase (EC 6.1.1.22) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16502162|emb|CAD05400.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137988|gb|AAO69549.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56128208|gb|AAV77714.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|194456945|gb|EDX45784.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194710132|gb|ACF89353.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195631055|gb|EDX49641.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197094351|emb|CAR59863.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197289886|gb|EDY29247.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197937846|gb|ACH75179.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205271988|emb|CAR36832.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205332405|gb|EDZ19169.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205341479|gb|EDZ28243.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|206708194|emb|CAR32487.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|320085243|emb|CBY95028.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322616430|gb|EFY13339.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322619680|gb|EFY16555.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622624|gb|EFY19469.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322629773|gb|EFY26548.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632505|gb|EFY29251.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322637000|gb|EFY33703.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641461|gb|EFY38099.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646073|gb|EFY42589.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649625|gb|EFY46056.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322654074|gb|EFY50397.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658606|gb|EFY54868.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322663463|gb|EFY59665.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322670199|gb|EFY66339.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322671435|gb|EFY67557.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676791|gb|EFY72858.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682715|gb|EFY78734.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686395|gb|EFY82377.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195918|gb|EFZ81085.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199794|gb|EFZ84883.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202787|gb|EFZ87823.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323209058|gb|EFZ93995.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323209973|gb|EFZ94880.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217982|gb|EGA02697.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222013|gb|EGA06400.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226587|gb|EGA10792.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229783|gb|EGA13906.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233008|gb|EGA17104.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240743|gb|EGA24785.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323243059|gb|EGA27080.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249778|gb|EGA33680.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252749|gb|EGA36587.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323259163|gb|EGA42807.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323259986|gb|EGA43614.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323268013|gb|EGA51492.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269861|gb|EGA53310.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326622679|gb|EGE29024.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326627252|gb|EGE33595.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 466

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 106/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E   +    +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFADLEDNARLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAIAR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G    +   W    S      +       
Sbjct: 300 LERFVSTDFAQV-------DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPKEIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMAEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|228987808|ref|ZP_04147917.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228771856|gb|EEM20313.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|324328451|gb|ADY23711.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 463

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 111/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +                F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+    E       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMKEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|229158164|ref|ZP_04286232.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625326|gb|EEK82085.1| Asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 463

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 111/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +                F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+    E       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMKEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|229163550|ref|ZP_04291500.1| Asparaginyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619932|gb|EEK76808.1| Asparaginyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 463

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 112/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +                F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRMNEDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|256080758|ref|XP_002576644.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238661921|emb|CAZ32881.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 526

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 111/351 (31%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +     EY     F+ I +  +  +  +E    
Sbjct: 200 NQDTRLDNRCIDLRTPVNQAIYRIEAGVVKFFMEYLTNAGFVNIHTPKMISAA-SEGGAN 258

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F        +     YL  SP+   +  +AA  E++F     +R  +     H  EF  
Sbjct: 259 VFRV-----SYFSGSAYLAQSPQLYKQMAIAADFERVFTIGSVFRAEDSNTHRHLTEFVG 313

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A +++   + D +  +        Q+ +  +          E     +   R   
Sbjct: 314 LDIEMAFKNHYHEVVDLIADMFVHMFKGLQREYQTEIQIICQQYHSEPFEFLQPTLRLQY 373

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            D                    Q AG  +   D  +    + L + I+     +   ILD
Sbjct: 374 RD---------------AIRMLQDAGWEIGELDDLNTPAEKFLGKLIKEKYHTD-FYILD 417

Query: 240 RYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P    +     +P D  ++  ++ +    E+ +    + DP+    R         K+
Sbjct: 418 KFPLDIRAFYTMPHPTDKGYSNSYDFFMRGEEIMSGAQRIHDPVLLSER-----ATHHKV 472

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E     + ++       P  +G  +G +R+ ML  G +NI +    P  
Sbjct: 473 DLEKI---KAYIDAFRYGCPPHAGGGIGLERVTMLFLGLDNIRKTSMFPRD 520


>gi|49481692|ref|YP_038607.1| asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|162382772|ref|YP_896857.2| asparaginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|229186812|ref|ZP_04313967.1| Asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|59798536|sp|Q6HCW9|SYN_BACHK RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49333248|gb|AAT63894.1| asparagine--tRNA ligase (asparaginyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|228596549|gb|EEK54214.1| Asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 463

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 112/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKDEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +                F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|220931658|ref|YP_002508566.1| asparaginyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992968|gb|ACL69571.1| asparaginyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 463

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 50/356 (14%), Positives = 108/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-FL----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
            H R R          R+ +  ++ ++F +  F  I S  +          +   +T   
Sbjct: 122 AHLRPRTNTFGVVNRFRSKMAYAIHKFFQDRGFHYIHSPIITTGDAEGAGEVFTVTTFDL 181

Query: 65  -----ELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                    +    +  +     L  S +    +L+A     ++ F   +R        H
Sbjct: 182 QNPPLSEGGEIDFSQDFFGEEAGLTVSGQLEA-ELMATALGDVYTFGPTFRAENSNTSRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E++M      I+   + A  +           F++       + 
Sbjct: 241 ASEFWMIEPEMAFCDLEEMMDIIEEFIKFLFKYALDECPE----EMEFFNKWIDKGRIDI 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             +  + +                    +++G        W           +       
Sbjct: 297 LKKIIDAEFAHITYTE-------AIDILEKSGEDFEFPVKWGMDLQSEHERYLTEKHFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +  +  +     +       E++   ++  R++  ++
Sbjct: 350 PVMV-TDYPKDIKAFYMRVNDDDKTVRAVDCLVPQV------GEIIGGSQREERYDVLLK 402

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K++        + FL          SG  +GF+RL+M ++G  NI +VI  P +
Sbjct: 403 RMKELDMNIEKY-QWFLDIRKYGTVPHSGFGLGFERLLMYISGMKNIRDVIPFPRT 457


>gi|301056067|ref|YP_003794278.1| asparaginyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378236|gb|ADK07140.1| asparaginyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 463

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDETKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +                F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+    E       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMKEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|291551155|emb|CBL27417.1| asparaginyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 463

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 103/359 (28%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++   ++ ++F +  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFQAVFRVRSLAAYAIHQFFQDRGFVYVHTPLITGSDCEGAGEM--FRVTTLD 180

Query: 69  QD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            D             +  +     L  S + + +    A    I+ F   +R        
Sbjct: 181 MDNVPKNEDGTVDYTQDFFGKETSLTVSGQLNGETYAQA-FRNIYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M+    +++                  N F+      + +
Sbjct: 240 HAAEFWMIEPEIAFADLEDDMELAEAMLKYVINYV----LENAAEEMNFFNSFVDKGLLD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N D                    ++   +  +  +W           +   +  
Sbjct: 296 RLHNVVNSDFARVTYTE-------AVEILEKNNDKFDYKVSWGCDLQTEHERYLTEQVYK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        D  +   R    
Sbjct: 349 RPV-FVTDYPKEIKAFYMKMNEDGKTVAAVDCLVPGIGEIIGGSQREDDYDKLLGR---- 403

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              K+    E    D  F   L      + +G  +GF+R VM +TG +NI +VI  P +
Sbjct: 404 --MKELGLKEE---DYGFYLDLRKYGSTRHAGFGLGFERCVMYLTGMSNIRDVIPFPRT 457


>gi|228993282|ref|ZP_04153198.1| Asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766350|gb|EEM14993.1| Asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 463

 Score =  155 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 59/359 (16%), Positives = 112/359 (31%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +  F     
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEM--FRVTTQ 179

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +++ K            +     L  S + + +    A    ++ F   +R       
Sbjct: 180 DMNNLPKGEDGKVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTT 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E +M    ++++ A +                F+     TV 
Sbjct: 239 RHAAEFWMVEPEIAFAELEDVMDLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N D G                  Q++G    +   W           +   + 
Sbjct: 295 ERMNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI- 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    I       EL+   ++  R +  
Sbjct: 347 FKRPVFVTDYPKDIKAFYMRMNDDGKTVAATDLLVPGI------GELIGGSQREERMDVL 400

Query: 292 M-QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 401 VDRIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|326202576|ref|ZP_08192444.1| asparaginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987160|gb|EGD47988.1| asparaginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 464

 Score =  155 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 49/353 (13%), Positives = 103/353 (29%), Gaps = 43/353 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI--------- 59
           H R R          R++   ++ ++F E  F+ + +  +  S       +         
Sbjct: 124 HLRPRTNTFSAVFRVRSLAAFAIHKFFQERGFVYVHTPLITGSDCEGAGQMFRVTTLDMK 183

Query: 60  RAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
               TE    D+  +  +     L  S + + +    A  + I+ F   +R        H
Sbjct: 184 NPPRTENGDIDY-SQDFFEKETSLTVSGQLTGEAYAMA-FKNIYTFGPTFRAENSNTARH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M    ++++                    F+      + E 
Sbjct: 242 AAEFWMIEPEIAFSDLKDDMMLAEDMLKYVINYV----VENAPEEMQFFNSFVDKGLLER 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D                    ++   +  +   W           I   +   
Sbjct: 298 LDNVVNSDFAHITYTE-------AIEILKKNKDKFEYPVEWGADLQTEHERYITEQVYKK 350

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    +       E++   ++  R +   +
Sbjct: 351 PV-FVTDYPKEIKAFYMRINDDNKTVAAMDLLVPGV------GEIIGGSQREERLDILEK 403

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +   +        + +L        + +G  +GF+R +M +TG  NI +VI  
Sbjct: 404 KMDDMGLSKEDY-QWYLDLRKYGGTKHAGFGLGFERAIMYLTGITNIRDVIPF 455


>gi|77411588|ref|ZP_00787930.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77162373|gb|EAO73342.1| asparaginyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 448

 Score =  155 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  S  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  KP +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGKPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +     ++        +         +  + D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLNRAPQALDILERDVEALKR--YIAEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             TL    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AITLLQEHEADEDTDYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDDYDALVAKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEYD-FYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|323487320|ref|ZP_08092620.1| hypothetical protein HMPREF9474_04371 [Clostridium symbiosum
           WAL-14163]
 gi|323694241|ref|ZP_08108417.1| asparagine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323399365|gb|EGA91763.1| hypothetical protein HMPREF9474_04371 [Clostridium symbiosum
           WAL-14163]
 gi|323501714|gb|EGB17600.1| asparagine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 463

 Score =  155 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 105/357 (29%), Gaps = 45/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL-- 66
           H R R          R++   ++ +YF E+ F+ + +  +  S       +   +T    
Sbjct: 123 HLRPRTNTFQAVFRVRSLAAYAIHQYFQEHDFVYVHTPLITGSDCEGAGEMFQVTTLDLN 182

Query: 67  -----------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                        QD   KP  L  S + + +    A    ++ F   +R        H 
Sbjct: 183 NVPKTPEGAVDFAQDFFNKPTNLTVSGQLNAETYAMA-FRNVYTFGPTFRAENSNTTRHA 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       M    ++++                  N F++     + E  
Sbjct: 242 AEFWMIEPEMAFADLNDNMALAESMLKYVIRYV----LEHAPEEMNFFNQFIDKGLLERL 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               N + G                  ++      +   W           +   +    
Sbjct: 298 NHVLNSEFGHVTYTE-------AVKLLEEHNDEFDYKVFWGCDLQTEHERYLTEKI-FQK 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP    A       D +     +     I E+        D  +   R ++   
Sbjct: 350 PVFVTDYPKEIKAFYMKMNEDNKTVAAMDCLVPGIGEIIGGSQREDDYDKLVARMDELGL 409

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K+         D  F   L      + SG  +GF+R VM +TG +NI ++I  P +
Sbjct: 410 RKE---------DYGFYLDLRKYGSTRHSGFGLGFERCVMYLTGVSNIRDIIPFPRT 457


>gi|229019778|ref|ZP_04176581.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026005|ref|ZP_04182389.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735286|gb|EEL85897.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228741503|gb|EEL91700.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 463

 Score =  155 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 112/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSVAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +                F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++G    +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRMNEDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|157692736|ref|YP_001487198.1| asparaginyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157681494|gb|ABV62638.1| asparagine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 452

 Score =  155 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 108/349 (30%), Gaps = 42/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F +  F+++D   L   +P         
Sbjct: 136 MDHRHLWLRSK--KQHAIMKIRNEIIRATYEFFHQEGFVKVDPPILTGSAPEG------- 186

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 187 TTELFATKYFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIE 245

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   + + ++   N +    +   +      +                        D
Sbjct: 246 PEMAFVEFNENLEYQENYVTHVVQSVLENCKVELHT--------------------LGRD 285

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                +      R       +    +   D  W D F       I  +   +    +  Y
Sbjct: 286 TAKLENIKAPFPRITYDEAIKFLQEKGFDDIEWGDDFGAPHETAIAESY--DKPVFITHY 343

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKKKI-Y 299
           P            D        +   ++       E++   E+ H  E  E + K+    
Sbjct: 344 PTSLKPFYMQPAPDRDDV----VLCADLIAPEGYGEIIGGSERVHDLELLEARLKEHGLD 399

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ETY    +           SG  +G +R V  ++GA ++ E I  P  
Sbjct: 400 QETYKWYTELRQ--YGSVPHSGFGLGLERTVAWISGAPHVRETIPFPRL 446


>gi|172037197|ref|YP_001803698.1| asparaginyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171698651|gb|ACB51632.1| asparaginyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 463

 Score =  155 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 111/360 (30%), Gaps = 51/360 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R       +  RN   +++ ++F E  FI I +  +  S       +  F+     
Sbjct: 123 HLRSRTNTLGAVMRVRNACATAIHKFFQERDFIWIHTPIITASDCEGAGEL--FTVTNFD 180

Query: 69  ---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          QD   K  YL  S +    +++A   + ++ F   +R        
Sbjct: 181 LGKVPLDKQQKIDYTQDFFGKQAYLTVSGQLEA-EVMAMAFQNVYTFGPTFRAENSNTSR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E         ++   +   +        +   F++    +V E
Sbjct: 240 HLAEFWMVEPEMAFCDIEGDQDLAEEFLKYIFKYVLKTCPE----DMEFFNKRIDKSVLE 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N +        ++          +++  +  +   W           +   L  
Sbjct: 296 TADNIINNEF-------ERITYTKAIELLEKSNKKFEYAVEWGIDLQSEHERYLAEELFK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               I+  YP    A       D +             L     E++   ++  R +   
Sbjct: 349 KPL-IVTNYPTGIKAFYMRLNDDNKTVAAM------DVLAPKIGEIIGGSQREERLDILE 401

Query: 293 QEKKKI----YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   ++     +  + +D             +G  +GF+R+V  +TG  NI +VI  P +
Sbjct: 402 KRINEMGIIPDDLWWYLDLR----RYGTVPHAGFGLGFERVVQFMTGMANIRDVIPFPRT 457


>gi|168185695|ref|ZP_02620330.1| asparaginyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169296388|gb|EDS78521.1| asparaginyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 463

 Score =  155 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 47/356 (13%), Positives = 104/356 (29%), Gaps = 41/356 (11%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
            H R R          R++   ++ ++F +  F+ + +  +  S       +   +T   
Sbjct: 122 AHLRPRSNAFSAVFRVRSLAAYAIHKFFQDQGFVYVHTPIITGSDCEGAGEMFRVTTLDM 181

Query: 65  -----ELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                +       ++  +     L  S +   +    A    ++ F   +R        H
Sbjct: 182 ENLPKDEQGNVDYKQDFFGKQSNLTVSGQLEAEIYALA-FRNVYTFGPTFRAENSNTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M     +++                    F++     + E 
Sbjct: 241 ASEFWMIEPEMAFAELKDYMDVAEEMVKYIINYVRDNAPE----EMEFFNKFIDKGLLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N                      Q++G    +   W           +   +   
Sbjct: 297 LDNVVNSHFARISYTE-------AVEILQKSGAEFEYPVEWGIDLQTEHERYLTEQIYKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    I       E++   ++  R +    
Sbjct: 350 PV-FVTDYPKDIKAFYMRMNDDNKTVAAADLLVPGI------GEIIGGSQREERLDILEA 402

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++  E       +L        + +G  +GF+R++M +TG +NI +V+  P +
Sbjct: 403 RMAELGLEREDY-WWYLELRKYGETKHAGYGLGFERMIMYLTGMSNIRDVLPFPRT 457


>gi|89897698|ref|YP_521185.1| asparaginyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|219670847|ref|YP_002461282.1| asparaginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|123091599|sp|Q24MK1|SYN_DESHY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|89337146|dbj|BAE86741.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219541107|gb|ACL22846.1| asparaginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 463

 Score =  155 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 109/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F +  F+ I +  +  S       +  F    +
Sbjct: 122 AHLRPRTNTFAAVFRVRSLVAYAIHKFFQDKGFVYIHTPIITGSDAEGAGEM--FRVTTL 179

Query: 68  IQDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             D +           K  +     L  S + + +    A    ++ F   +R       
Sbjct: 180 DLDALPRTEEGRIDYAKDFFGKETNLTVSGQLNAETYCMA-FRNVYTFGPTFRAENSNTA 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M+    +++                    F+E    T+ 
Sbjct: 239 RHAAEFWMIEPEIAFADLQDDMELAEEMMKYLISYV----LEHAPEEMAFFNEFVDKTLF 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D G                  Q+   R      W           +   + 
Sbjct: 295 DRLDNIVNSDFGRLTYTE-------AIEILQKEKERFEFPVEWGADLQTEHERFLTEQIF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                ++  YP    A       D +     +L    +       E++   ++  R +  
Sbjct: 348 KKPVFVV-DYPKDIKAFYMRLNDDQKTVAAMDLLVPGV------GEIIGGSQREERLDYL 400

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +   ++          +L        + +G  +GF+R++M +TG +NI +V+  P +
Sbjct: 401 EKRMAELGLHKEDY-SWYLDLRKYGGTRHAGYGLGFERVIMYLTGISNIRDVVAFPRT 457


>gi|228999332|ref|ZP_04158912.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229006887|ref|ZP_04164519.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754380|gb|EEM03793.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228760529|gb|EEM09495.1| Asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 463

 Score =  155 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 59/359 (16%), Positives = 112/359 (31%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +  F     
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEM--FRVTTQ 179

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +++ K            +     L  S + + +    A    ++ F   +R       
Sbjct: 180 DMNNLPKGEDGKVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTT 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E +M    ++++ A +                F+     TV 
Sbjct: 239 RHAAEFWMVEPEIAFAELEDVMDLTEDMLKYAMKHV----LEHAPEEMEFFNSFVDKTVL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N D G                  Q++G    +   W           +   + 
Sbjct: 295 ERMNNVINSDFGRITYTE-------AIKVLQESGADFKYPVEWGIDLQTEHERYLSEEI- 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    I       EL+   ++  R +  
Sbjct: 347 FKRPVFVTDYPKDIKAFYMRMNDDGKTVAATDLLVPGI------GELIGGSQREERMDVL 400

Query: 292 M-QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 401 VDRIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|145353608|ref|XP_001421099.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581335|gb|ABO99392.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 503

 Score =  155 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 57/364 (15%), Positives = 93/364 (25%), Gaps = 49/364 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFSTE 65
            H R R          RN +  +   +F E+ F+  ++  +  S      E        E
Sbjct: 152 AHLRPRTNTIGAVARVRNQLAYATHTFFQEHGFLYANTPIITASDCEGAGEQFQVTTLVE 211

Query: 66  LIIQD-------------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
            +  +                      KP YL  S +    +++A     I+ F   +R 
Sbjct: 212 ALKNNRPSSDLPKNKDGSIDYSQDFFGKPSYLTVSGQL-NGEIMACAVNDIYTFGPTFRA 270

Query: 107 GEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
                  H  EF M+E   A       M      ++       +                
Sbjct: 271 ENSNTSRHLAEFWMVEPELAFADLNDDMDCAEAYLKYCLNHVLEHCDEDLEF-------F 323

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +                    +     L A++   +      W           
Sbjct: 324 EKNISKDNLRERLRNVASQEFARITYTEAVEHVLNAKK---KFEFPIEWGSDLQSEHERY 380

Query: 226 IEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           I   +  +   I+  YP    A        +        L     EL             
Sbjct: 381 ISEEVFKDRPVIVRDYPKDIKAFYMRLNDDNKTVAAMDVLVPRVGELMGGSQREERLDVL 440

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             R E+   EK+            +L          +G  +GF+RLV  VTG  NI + I
Sbjct: 441 ERRIEEVGLEKESY--------WWYLDLRRYGSQPHAGFGLGFERLVQYVTGVENIRDAI 492

Query: 344 WTPF 347
             P 
Sbjct: 493 PFPR 496


>gi|331083267|ref|ZP_08332380.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330404348|gb|EGG83893.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 463

 Score =  155 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 103/359 (28%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++I  ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFQAVFKVRSLIAYAIHQFFQEQGFVYVHTPLITGSDCEGAGEM--FQVTTMD 180

Query: 69  QDH----------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +             +  +     L  S +    +  A     I+ F   +R        
Sbjct: 181 LNDIPKTEEGKVDFSQDFFKKPTNLTVSGQL-NGETFAQAFRNIYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +  M    ++++                  N F+      + +
Sbjct: 240 HAAEFWMIEPEMAFSDLDDNMALAESMLKYVIRYV----LENAPEEMNFFNSFVDKGLLD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N + G                  ++A  +  +   W           +   +  
Sbjct: 296 RLNNVLNSEFGHVTYTE-------AIEILEKANDKFDYKVYWGCDLQTEHERYLTEQVYK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+           +   R ++ 
Sbjct: 349 RPV-FVTDYPKEIKAFYMKQNEDGKTVAAMDCLVPGIGEIIGGSQREDSYEKLSQRMKEM 407

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +  E    D  F   L      + SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 408 N-----LNEE----DYGFYLDLRKYGSTRHSGFGLGFERCVMYLTGMQNIRDVIPFPRT 457


>gi|302882325|ref|XP_003040073.1| hypothetical protein NECHADRAFT_96752 [Nectria haematococca mpVI
           77-13-4]
 gi|256720940|gb|EEU34360.1| hypothetical protein NECHADRAFT_96752 [Nectria haematococca mpVI
           77-13-4]
          Length = 812

 Score =  155 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 111/336 (33%), Gaps = 38/336 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H   +     R+M+    R    +  F+EI +  LQ +   E+    F       ++  
Sbjct: 172 RHPSNQALFRVRSMVSRVFRNTLEQYGFVEIHTPKLQPAA-TESGAAVFPV-----NYFG 225

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA-HESYEQ 131
           +  +L  SP+ + +  ++A   ++F     +R        H  E+T L+   A    Y +
Sbjct: 226 RRAFLAQSPQLAKQMSISADFGRVFEVGPVFRAENSNTHRHLTEYTGLDLEMAIDSDYHE 285

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++     ++                   P  E +++           + +    D  D 
Sbjct: 286 VIQFIDIFLKEVFRTVYSSRELEVIRKRWPSGEFKWLDETPIIPFSEGLQMLRD-DGRDV 344

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALAN 250
            +  L      + G                  + +      +   +LD++PA        
Sbjct: 345 EEEDLSTPDEIRLG------------------QLVREKYNTD-YYVLDKFPANARPFYTA 385

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             P DP++T+ F+++    E+C+    + +  E R            +  +     ED+L
Sbjct: 386 KDPEDPKWTRSFDIFIRGQEICSGGQRIHNVEELRA-----NMAAAGMSEDGM---EDYL 437

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                  P  +G  +G +R+V  +    ++      
Sbjct: 438 TAFELGAPPHAGAGLGLERIVAWMLELGDVRYASLF 473


>gi|229062242|ref|ZP_04199564.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717070|gb|EEL68749.1| Asparaginyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 463

 Score =  155 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 110/359 (30%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +  F     
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEM--FRVTTQ 179

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +             K  +     L  S + + +    A    ++ F   +R       
Sbjct: 180 DLNNVPKGEDGQVDESKDFFAKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTT 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      +M    ++++ A +              + F+     TV 
Sbjct: 239 RHAAEFWMVEPEIAFAELGDVMDLTEDMLKYAMKYV----LEHAPEEMDFFNSFVDKTVL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N D G                  Q++G    +   W           +   + 
Sbjct: 295 ERMNNVINSDFGRITYTE-------AIKVLQESGAEFKYPVEWGIDLQTEHERYLSEEI- 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    I       EL+   ++  R +  
Sbjct: 347 FKRPVFVTDYPKDIKAFYMRMNEDGKTVAATDLLVPGI------GELIGGSQREERMDVL 400

Query: 292 M-QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 401 VDRIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|295663653|ref|XP_002792379.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226279049|gb|EEH34615.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 968

 Score =  155 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 110/331 (33%), Gaps = 28/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ + +          FIEI +  LQ S   E+    F       ++  +  Y
Sbjct: 299 SQSIFRIQSAVSNLFHSALDSQGFIEIHTPKLQGSA-TESGASVFEV-----NYFSRAAY 352

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A + +     + 
Sbjct: 353 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIDEHYHEALEV 412

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           +  +          E +   +        D    L++        
Sbjct: 413 IDCVLKEIFKGIYVRYRREVDIIKHQFPHEDLVWLDKTPVIRFSDGIKLLNDSGW----- 467

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
                ++ G  +  ++         L E I+     +   ILD+YP        +  P +
Sbjct: 468 -----RRDGEELPTNEDLGTRDEMRLGELIKEKYHTD-YYILDKYPRVARPFYAMEDPEN 521

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
           P FT  F+++    E+ +    + D      R       +    +      ED+L     
Sbjct: 522 PEFTNSFDIFVRGQEIVSGGQRIHDEKILEKR------MRDAGIDPLTM--EDYLEGFRW 573

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +RL+ML+    NI      
Sbjct: 574 GAPPHAGAGIGLERLIMLILKLGNIRLASMF 604


>gi|182420037|ref|ZP_02951271.1| asparaginyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669571|ref|ZP_04529551.1| asparagine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376074|gb|EDT73661.1| asparaginyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655015|gb|EEP52575.1| asparagine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 464

 Score =  155 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 105/356 (29%), Gaps = 41/356 (11%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRA 61
            H R R          R++   ++ ++F E  F+   +  +  S      E    T +  
Sbjct: 123 AHLRPRSNAFSATFRVRSVAAYAIHKFFQEQNFVYTHTPIITGSDCEGAGEMFRVTTLDP 182

Query: 62  FSTELIIQ-------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + EL  +       D   K   L  S +    +  A     I+ F   +R        H
Sbjct: 183 KTPELTKEGNVDYTKDFFGKETNLTVSGQL-NAECFALAFRNIYTFGPTFRAENSNTTRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M+    +++   +    +           F+      + E 
Sbjct: 242 AAEFWMIEPEIAFADLQDDMELAEAMLKYVIQYVIDECPE----EMQFFNSFVDKGLLER 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                + D                    ++ G    +  +W           +       
Sbjct: 298 LNHVVSSDFARVTYTE-------AVEILEKCGKEFDYPVSWGIDLQTEHERYLTEEHFKK 350

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    I       E++   ++  R +    
Sbjct: 351 PL-FVTDYPKDIKAFYMRMNDDNKTVAATDLLVPGI------GEIIGGSQREERLDVLEA 403

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++          +L        + +G  +GF+RL+M +TG  NI +VI  P +
Sbjct: 404 RMAELGLAKEDY-WWYLELRKYGETKHAGFGLGFERLIMYITGMTNIRDVIPFPRT 458


>gi|197263554|ref|ZP_03163628.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197241809|gb|EDY24429.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 466

 Score =  155 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 105/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E   +    +++       ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFADLEDNARLAEAMLKYVFNAVLEE----RADDMKFFAERVDKDAIAR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G    +   W    S      +       
Sbjct: 300 LERFVSTDFAHV-------DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPKEIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMAEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|301156337|emb|CBW15808.1| asparaginyl tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 467

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRGEDGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++           + +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAV----LTERKDDLKFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|332534604|ref|ZP_08410437.1| asparaginyl-tRNA synthetase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035954|gb|EGI72434.1| asparaginyl-tRNA synthetase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 465

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 62/360 (17%), Positives = 110/360 (30%), Gaps = 45/360 (12%)

Query: 13  DFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R  +       RN +  ++  ++ E  F  I +  +  S       +   ST  
Sbjct: 123 HAHLRPRTNMIGAVTRVRNCLAQAIHRFYHEQGFYWISTPIITASDCEGAGEMFRVSTLD 182

Query: 67  -------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          +D   K  +L  S + + +   +A   KI+ F   +R        
Sbjct: 183 MQNLPLTDKGDVDYSEDFFGKEAFLTVSGQLNGETYASAMS-KIYTFGPTFRAENSNTSR 241

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E + K   N+++   +   ++    +  +   F++    T   
Sbjct: 242 HLAEFWMVEPEVAFADLEDIAKLAENMLKYVFKAVLEE----RRDDMEFFAQRVEKTAIT 297

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
               + + D           D        +  G +  +   W           +      
Sbjct: 298 RLEEFVDKDFAQV-------DYTDAVEILKNCGKKFEYAVEWGVDLQSEHERYLAEEHFK 350

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               I   YP    A       D +     ++ A  I E+               R E+ 
Sbjct: 351 APVVIK-NYPRDIKAFYMRQNEDGKTVAAMDVVAPGIGEIIGGSQREERLDVLDARLEEM 409

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              K+         D  +   L        SG  +GF+RLV  VTG  N+ +VI  P ++
Sbjct: 410 GLNKE---------DYSWYRDLRKYGSVPHSGFGLGFERLVAYVTGMGNVRDVIAFPRTK 460


>gi|94993952|ref|YP_602050.1| asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|123080131|sp|Q1J7K5|SYN_STRPF RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94547460|gb|ABF37506.1| Asparaginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 448

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVMQIRNAIIYATYEFFDQNGFIKFDSPILSENAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  KP +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGKPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +     ++        +         +  + D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKR--YITEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             TL    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AITLLQEHEADEDTDYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDNYDTLVAKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEYD-FYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|320162942|gb|EFW39841.1| asparaginyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 864

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 52/361 (14%), Positives = 100/361 (27%), Gaps = 48/361 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       L  RN +  ++  +F +  F+ +++  +  S       +    T   
Sbjct: 520 AHLRARTNSGGAILRVRNALTMAIHRHFQDKDFLNVNTPIITSSDCEGAGSLFRLETSPA 579

Query: 68  IQ----------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QG 110
                                  P YL  S +    + +A+G  +++     +R      
Sbjct: 580 AAVGADAAAASQPPAPHESFFGHPAYLTCSGQLHA-EAVASGMSRVYVLGPTFRAENSHT 638

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF MLE  +            +++     +     I S  + +   F       +
Sbjct: 639 KRHMAEFYMLEAEQFFIDQMDE---LLDLTSDCVKDLTATIVSKCSDDLAHFQRHVDSNL 695

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            E           T      +          ++       D  W    +      +    
Sbjct: 696 LERL-------HNTIEQPFARLTYTEAVEILEERRTMFKVDPKWGVDLNSDHERFLCEQY 748

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD---ELLDPIEQRHR 287
                  +  YPA           D +     +L    I          E    + Q  R
Sbjct: 749 CKRPV-FITDYPAAIKPFYMRRNMDNKTVAAMDLLVPGIGELVGGSLREERASVLMQIMR 807

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + + + +      + +D              G  MGF+RL+M +TG  N+ + I  P 
Sbjct: 808 SHQMLPQMQ------WYLDLR----RYGTAPHGGFGMGFERLMMYLTGTENVRDTIPFPR 857

Query: 348 S 348
           +
Sbjct: 858 T 858


>gi|219848798|ref|YP_002463231.1| asparaginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|254782876|sp|B8GBG7|SYN_CHLAD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|219543057|gb|ACL24795.1| asparaginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 440

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 57/347 (16%), Positives = 110/347 (31%), Gaps = 38/347 (10%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
            +  W R    ++   L  R  + ++ +E+  E  F+  D+  L  +    T      T 
Sbjct: 120 HRHLWVRSA--KQHAILRIRAEVIAAAQEWLNEQGFVRFDTPILTATAAEGT------TN 171

Query: 66  LIIQDHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           L   D+      YL  + +   +  + +   K++CF   +R  +     H  EF M+E  
Sbjct: 172 LFATDYFDLGKAYLAQTGQLYVEAGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPE 230

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A   +E  M+     +         +                   +       + ++  
Sbjct: 231 VAFADHEDNMRLQEQFVSAIVARVLDR---------------RREDLKVLERDISLLEQV 275

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                    D+ +  + A Q  +  A+   W + F       I      +    ++R+P+
Sbjct: 276 VPPFPRITYDQAIELIAAHQGEVEGAYPLPWGEDFGAPHETLIASK--FDRPVFVERFPS 333

Query: 244 PE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
              +      P  P      +L A     E+      + DP     R        +   +
Sbjct: 334 AVKAFYMQPDPNRPEVALCADLLAPEGYGEIIGGSQRIHDPDLLEQRIRAHGLRLE---D 390

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + +D             SG  MG +R+V  +TG  +I E I  P 
Sbjct: 391 YQWYLDLR----RYGTVPHSGFGMGIERVVAWITGTRHIRETIPFPR 433


>gi|161579024|ref|NP_870953.2| asparaginyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 462

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 106/357 (29%), Gaps = 47/357 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI--------- 59
           H R R       +  RN I  S+  +F +  F  + +  +  S       +         
Sbjct: 124 HLRARTNTLGAVMRVRNRISQSIHRFFDDEGFNYLHTPIITASDCEGAGEMFRVTTLNLE 183

Query: 60  ------RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                 R F T    QD  +KP +L  S +   +    A   +++ F   +R        
Sbjct: 184 KLAGSNRPFDT---KQDFFQKPTHLTVSGQLEAETYATA-LSRVYTFGPTFRAENSNTSR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M+     ++           S    + + F+E       +
Sbjct: 240 HLAEFWMVEPEAAFYDLNDNMQLAERFLK----RVFSDCLSHCGEDMDFFNERIEKGKID 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                    +    ++    D     L   +   +  +   W           +     +
Sbjct: 296 QLKSV----IEKPFEHMTYTDAVERLLACDE---KFEYPVNWGTDLQAEHERYL--TSVV 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               IL  YP+           D +     ++    +       E++   ++  R +   
Sbjct: 347 GGPVILTDYPSSIKPFYMRVSDDGKTVAAMDVLVPGV------GEIIGGSQREERLDVLQ 400

Query: 293 QEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +   +       ++          +G  +G +R V  VTG  NI +VI  P +
Sbjct: 401 RRMAEGGLDESEY-WWYVDLRRYGTVPHAGFGLGLERAVQYVTGMANIRDVIPFPRT 456


>gi|168703151|ref|ZP_02735428.1| asparaginyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 494

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 105/356 (29%), Gaps = 40/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
            H R R          R+ +  S+ ++F E  F  + +  +  S   G     R  + + 
Sbjct: 152 AHLRPRTNTLGAVARVRHQVSISIHQFFHERGFYYVHTPVITASDCEGAGAMFRVSTIDP 211

Query: 67  IIQ-----------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                         D   KP YL  S +   +    A   KI+ F   +R        H 
Sbjct: 212 EAPPKAEGKVDYKQDFFGKPAYLTVSGQLQGEAFACA-LGKIYTFGPTFRAENSNTPRHL 270

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       M      ++           ++   +   F+E       E  
Sbjct: 271 AEFWMIEPEMAFYDLTDNMDLAEAFLK----RIISDAMTYCLEDLKFFAE-----KLENN 321

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                       +   +           ++G    +   W           +       C
Sbjct: 322 KGLFEKLENVLNNGFKRVSYTEGVDILLKSGKTWEYPVAWGVDLQSEHERYLAEQH-FKC 380

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEMQ 293
             IL  YP            D +  +  ++    +       E++   ++  R +  E +
Sbjct: 381 PVILYDYPRTLKPFYMKVNDDGKTVRAMDVLVPGV------GEIIGGSQREERLDVLESR 434

Query: 294 EKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +++         E +L          SG  +G +R ++ ++G  NI +VI  P +
Sbjct: 435 MREQGLPPEGY--EWYLDLRRYGTVPHSGFGLGLERTILFLSGMANIRDVIPFPRT 488


>gi|148826050|ref|YP_001290803.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|166231666|sp|A5UCB9|SYN_HAEIE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148716210|gb|ABQ98420.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 467

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVSRVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRSENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|314940159|ref|ZP_07847337.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942424|ref|ZP_07849267.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314952300|ref|ZP_07855311.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314994257|ref|ZP_07859560.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314997172|ref|ZP_07862158.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313588746|gb|EFR67591.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591344|gb|EFR70189.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595559|gb|EFR74404.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598824|gb|EFR77669.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640598|gb|EFS05178.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0133a04]
          Length = 432

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 110/349 (31%), Gaps = 41/349 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F ++ F++ID   L   +P         
Sbjct: 115 MDHRHLWLRSS--RQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 166 TTDLFETNYFDQKAYLSQSGQLYMEAAAMA-FGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      +   E        D
Sbjct: 225 PEMAFTHQEESLEVQEQYVAFLVQNV--------------------LDHCEYALDVLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTILDR 240
                     P   + Y  A +   +   DD  W + F       I           +  
Sbjct: 265 KEVLKTYTKLPFPRITYDDAIELLKKNGFDDIEWGEDFGSPHETFIA--NSFEQPVFILN 322

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP             P  T+   +   ++       E++   E+   ++  +++ +    
Sbjct: 323 YPKAIKPFYM----KPHPTREDVVICADMIAPEGYGEIIGGSERATDYDFLLEQIRNHGL 378

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +       +L          SG  +G +R V  + G +++ E I  P  
Sbjct: 379 DEKEY-SWYLDLRKYGSVPHSGFGLGLERTVTWIAGIDHVREAIPFPRL 426


>gi|269123212|ref|YP_003305789.1| asparaginyl-tRNA synthetase [Streptobacillus moniliformis DSM
           12112]
 gi|268314538|gb|ACZ00912.1| asparaginyl-tRNA synthetase [Streptobacillus moniliformis DSM
           12112]
          Length = 460

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 116/358 (32%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++ ++F+E  F+ + +     +       +  F    +
Sbjct: 119 AHLRPRTNTFNAVFRVRSLLAHAIHKFFMERNFVYVQTPIFTSTDAEGAGEM--FQVTTL 176

Query: 68  IQDHIR---------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +++                KP YL  + +   +   +A     + F   +R  E    
Sbjct: 177 DLNNLPRNEENIIDYREDFFAKPSYLTVTGQLHVEAFASA-FHNTYTFGPTFRAEESYTA 235

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A  + E  M    ++I+   +           +    F+      + 
Sbjct: 236 RHAAEFWMIEPEIAFANLETNMDIAESMIKYIIKYV----MDNAPLEMEFFNTWIEKGII 291

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +      N D G                  + +         W           +  N+ 
Sbjct: 292 DKLNNILNNDFGRVTYTE-------AIDILKNSDAEFTIPVEWGMDLKTEHERYLAENVF 344

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +  +  +L A  I       +  +  +   +    
Sbjct: 345 KKPV-FVTDYPKDIKAFYMKLNEDGKTVRAMDLLAPGIGEIVGGSQREEDYD---KLVNI 400

Query: 292 MQEKK-KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           M+EK+  I + ++ +D   L         SG  +GF+R++M +TG +NI +V+  P +
Sbjct: 401 MREKELNIDDYSWYLD---LRKF-GSFPHSGYGLGFERMLMYITGISNIRDVLAFPRT 454


>gi|108761851|ref|YP_630519.1| asparaginyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|123374663|sp|Q1DA04|SYN_MYXXD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|108465731|gb|ABF90916.1| asparaginyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 466

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 106/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNET---------H 58
            H R R          R+    ++  +F E  F  +++  +  S                
Sbjct: 125 AHLRVRTNTFSAVTRVRHRAAQAVHRFFDEEGFFWVNTPIITASDAEGAGQMFRVSTLDA 184

Query: 59  IRAFSTELII----QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
           +    T        +D   K  YL  S + + +    A   K++ F   +R        H
Sbjct: 185 VNPPRTSDGKIDWHKDFFGKEAYLTVSGQLNAEAYALAMS-KVYTFGPTFRAENSNTTRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A     +        ++   +       +    +   F E     V E 
Sbjct: 244 LAEFWMIEPEVAFADLNEDANLAERFLKHVFKAV----LNDCAPDLKFFEERVQKGVIER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ N        + ++ D        ++A  +   +  W           +     + 
Sbjct: 300 MEKFIN-------SSFERIDYTEAVEILKKAKKKFEFEPEWGKDLQTEHERYLTEEH-VG 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KE 291
              ++  YP    +       D +             L     E++   ++  R +   +
Sbjct: 352 RPVVVMNYPEAIKSFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDQ 405

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +K  +  E+Y    D           +G  +GF+RL++ + G  NI + I  P  
Sbjct: 406 RIQKFGLKPESYQWYRDLRR--YGSVPHAGFGLGFERLIVYMCGLQNIRDAIPYPRV 460


>gi|161761265|ref|YP_249074.2| asparaginyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 467

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRSENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|229544031|ref|ZP_04433090.1| asparaginyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229325170|gb|EEN90846.1| asparaginyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 430

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 63/351 (17%), Positives = 108/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F  + F +ID   L   +P         
Sbjct: 114 MDHRHLWLRSR--RQHAVMKIRNEIIRATYEFFNTHGFTKIDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFDEEAYLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  +K     +        +      +      S+ E ++    F R    D
Sbjct: 224 PEMAFYEHEDSLKVQEQYVSYIVRSVLENCKLDLHRLGRDTSKLEQVSA--PFPRITYDD 281

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L                    +   D  W + F       I  +   +    +  Y
Sbjct: 282 AIELLHE------------------KGFDDIKWGEDFGAPHETAIAES--FDKPVFITHY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           PA             P      +L A     E+    + + D      R +        +
Sbjct: 322 PAAIKPFYMQPDAKRPEVVLCADLIAPEGYGEIIGGSERINDYDLLLKRIKDFN-----L 376

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y   + +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 377 SEEAY---KWYLDLRKYGSVPHSGFGLGLERTVAWISGVEHVRETIPFPRL 424


>gi|325299015|ref|YP_004258932.1| Asparaginyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318568|gb|ADY36459.1| Asparaginyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 467

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 110/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPLITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIIYDNDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A    +       + F +       E 
Sbjct: 242 LAEFWMIEPEVAFNDINDNMDLAEEFIKYCVQWALDNCYDDVKFLNDHFDK-------EL 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +   + +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLQGVLKESFVRLPYTEGIKIL-EEAVANGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLLTRIKEL 411

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 NIPMKDM--------WWYLDTRKYGTCPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 461


>gi|227828226|ref|YP_002830006.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227830984|ref|YP_002832764.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229585454|ref|YP_002843956.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238620417|ref|YP_002915243.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284998473|ref|YP_003420241.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|227457432|gb|ACP36119.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227460022|gb|ACP38708.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228020504|gb|ACP55911.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|238381487|gb|ACR42575.1| aspartyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|284446369|gb|ADB87871.1| aspartyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|323475293|gb|ADX85899.1| aspartyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323478018|gb|ADX83256.1| aspartyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 429

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 106/337 (31%), Gaps = 45/337 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  L  +++   S RE   +  F+E+ +   +  +      +           +  K  +
Sbjct: 131 QAVLKIQSVAVKSFRETLYKYGFVEVFTPKIIASATEGGAQLFPVL-------YFGKEAF 183

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   K+LLA   E++F  A AWR  E     H  EF  ++   A   Y  +M   
Sbjct: 184 LAQSPQLY-KELLAGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEMAFADYNDIMALI 242

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             II        ++                     E   +  N           +     
Sbjct: 243 EQIIYNMINDVRREC--------------------ENELKILNYTPPDVKIPMKKISYSE 282

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPAD 255
                +  G+ +   D            ++  +        +  +P             +
Sbjct: 283 AIEILKSKGVNIKFGDDIGT-----PELRVLYSELKEDLYFVTDWPWLSRPFYTKQKKDN 337

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P+ ++ F+L    +E+ +                 E   K +  N      E FL     
Sbjct: 338 PQLSESFDLIFRWLEIVSGSSRNHVKEVL------ENSLKVRGLNPESF--EFFLKWFDY 389

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            MP  +G  MG  R+++++TG  ++ EV+  P  +  
Sbjct: 390 GMPPHAGFGMGLARVMLMLTGLQSVKEVVPFPRDKKR 426


>gi|30995440|ref|NP_439453.2| asparaginyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|20141639|sp|P43829|SYN_HAEIN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
          Length = 467

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRSENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDEKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|150016995|ref|YP_001309249.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149903460|gb|ABR34293.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 429

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 121/338 (35%), Gaps = 38/338 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
              +++     +N I+ + R +F  N F EI +  + +S G E     F+      ++  
Sbjct: 121 RIPKKKAIFKVQNEIEEAFRMFFKGNDFEEIHTPKITHS-GTEGGSEMFTV-----NYFN 174

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           +  +L  SP+F  + ++ AG E++F   +A+R        H  E+  L+           
Sbjct: 175 RRAFLAQSPQFWKQMMVGAGFERVFEVGYAYRAELHNTWRHLNEYVSLDVEMGFIKDETD 234

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           LM+   N IR   +  N+K                         +  ++ L   ++ P  
Sbjct: 235 LMEMEENFIRYLYKHLNEKCAEE--------------------LKLFDVVLPEEINIPRI 274

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
           P      +   +   +    +  ++    +  + ++     +    L  YP  +  +  +
Sbjct: 275 PLAKAQEILLAEFNKKSPVGNIDNEG-EALFHKYVKEKYNSD-YVFLTEYPTAKRPMYAM 332

Query: 252 -YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   TK F+L    +E+      + D    + + E   +   K+ +  + +D    
Sbjct: 333 ECEENREMTKSFDLIFKGVEITTGGQRIHDYEMLKAKME---RLGLKLEDFAFYLD---- 385

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                MP   G A+G +R+ M +    NI E    P  
Sbjct: 386 TFKYGMPPHGGFAIGLERITMQILNLGNIREASLFPRD 423


>gi|204929826|ref|ZP_03220847.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204320820|gb|EDZ06021.1| asparagine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 494

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 105/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 153 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 212

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 213 ENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 271

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E   +    +++       ++    +  +   F+E         
Sbjct: 272 LAEFWMLEPEVAFADLEDNARLAEAMLKYVFNAVLEE----RADDMKFFAERVDKDAIAR 327

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G    +   W    S      +       
Sbjct: 328 LERFVSTDFAQV-------DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKA 380

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 381 PVVVK-NYPKEIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 433

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 434 RMAEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 488


>gi|126657196|ref|ZP_01728362.1| asparaginyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126621467|gb|EAZ92178.1| asparaginyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 463

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 54/360 (15%), Positives = 110/360 (30%), Gaps = 51/360 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R       +  RN   +++ ++F E  F+ I +  +  S       +  F+     
Sbjct: 123 HLRSRTNTLGAVIRVRNACATAIHKFFQERDFLWIHTPIITASDCEGAGEL--FTVTNFD 180

Query: 69  ---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          QD   K  YL  S +    +++A   + ++ F   +R        
Sbjct: 181 LGKVPLDKQQKIDYTQDFFGKQAYLTVSGQLEA-EVMAMAFQNVYTFGPTFRAENSNTSR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E         ++   +            +   F++    +V E
Sbjct: 240 HLAEFWMVEPEMAFCDIEGDQDLAEEFLKYIFKYV----LEACPEDMEFFNKRIDKSVLE 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N +        ++          +++  +  +   W           +   L  
Sbjct: 296 TADNIINNEF-------ERITYTKAIELLEKSNKKFEYAVEWGIDLQSEHERYLAEELFK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               I+  YP    A       D +             L     E++   ++  R +   
Sbjct: 349 KPL-IVTNYPTGIKAFYMRLNDDNKTVAAM------DVLAPKIGEIIGGSQREERLDILE 401

Query: 293 QEKKKI----YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   ++     +  + +D             +G  +GF+R+V  +TG  NI +VI  P +
Sbjct: 402 KRINEMGIIPDDLWWYLDLR----RYGTVPHAGFGLGFERVVQFMTGMTNIRDVIPFPRT 457


>gi|304439986|ref|ZP_07399879.1| asparagine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371478|gb|EFM25091.1| asparagine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 460

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 107/356 (30%), Gaps = 42/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++I  ++ +YF EN F+ + S  +  S       +   +T  +
Sbjct: 120 THLRPRTNTFKAVFKVRSLIAFAIHKYFQENGFVYVHSPIITASDAEGAGEMFQVTTLDL 179

Query: 68  I------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
                        +D   +  +L  S +    +  A      + F   +R        H 
Sbjct: 180 KDIPMVDGKVDYNEDFFGRETHLTVSGQLEA-EAFAHAFRDCYTFGPTFRAENSNTARHA 238

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   +       ++  +  +    +     +          F++     + +  
Sbjct: 239 AEFWMVEPELSF----CKLEGMLENVEGCIKYVINYVLENAPDEMEFFNQFIDKGLLDRL 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                 D G                  +++     +   W           +   +    
Sbjct: 295 KSIVEKDFGKVTYTE-------AVELLKESKADFKYPVEWGIDLQTEHERYLTEEIFKKP 347

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP    A       D +  +  +L    I EL         P    +R  +   
Sbjct: 348 V-FVTDYPKDIKAFYMTLNEDNKTVRASDLLVPGIGELVGGSQREHRPEVLENRMREL-- 404

Query: 294 EKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +  + Y   E +L         +SG  +GF+RLVM +TG  NI +VI  P +
Sbjct: 405 ---GLDVDAY---EWYLDLRRYGTVITSGYGIGFERLVMYITGMKNIRDVIPFPRT 454


>gi|254497935|ref|ZP_05110699.1| asparaginyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254352829|gb|EET11600.1| asparaginyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 467

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 104/356 (29%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R+ +  ++  +F E  +  I +  +  S       +   ST   
Sbjct: 126 AHLRPRTNTFSAVTRVRHCLSQAIHRFFHEQGYFWIHTPIITASDCEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 LNIPKNPQGQIDFSKDFFGKETFLTVSGQLNLEAYCMAMS-KVYTFGPTFRAENSNTSRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +   +     N++R   +    +       +   F++       E 
Sbjct: 245 LAEFWMIEPEVAFATLSDICDLSQNMLRYLCKAVLNECLD----DMEFFNQFVAPGCLER 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               A+ +                    +++G       +W           +       
Sbjct: 301 LKHIADSEFEVMTYTD-------AIRVLEKSGHNFEFPVSWGLDLQSEHERYLAEVHCKK 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              IL  YP            D +     ++ A  I E+               R E+  
Sbjct: 354 PV-ILTNYPQEIKGFYMRLNDDEKTVAAMDVLAPGIGEIIGGSQREERLDILDRRIEECN 412

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K     E+Y    D           +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 413 LNK-----ESYQWYRDLRR--YGTVPHAGFGLGFERLVSYVTGLANVRDVIPFPRT 461


>gi|195977860|ref|YP_002123104.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225868802|ref|YP_002744750.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp.
           zooepidemicus]
 gi|195974565|gb|ACG62091.1| asparaginyl-tRNA synthetase AsnS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225702078|emb|CAW99706.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 448

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 69/349 (19%), Positives = 117/349 (33%), Gaps = 35/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+   +  RN I  +  E+F +N FI+ DS  L    GN       +
Sbjct: 125 MDHRHLWLRSR--RQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILS---GNAAEN---T 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P +L  S +   +  + A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGNPAFLSQSGQLYLEAGMMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                S+E+ +      ++   +                 +E     +AE F R +  D 
Sbjct: 236 EYPFLSHEESLDLQEAYVKAMIQGVLD-RAPQALELLERDTELLKKYIAEPFKRVSYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            + L      D                      D F       I    G+   T +  YP
Sbjct: 295 ISLLQEHSTDDDAD------------YEPIQHGDDFGSPHETWISNYFGV--PTFVINYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +       +L            E++    +   ++K + + K     
Sbjct: 341 ASFKAFYMKPVPGNEERVLCADL-----LAPEGYGEIIGGSVREDNYDKLLAKIKAEGL- 394

Query: 302 TYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             P D DF   L        +G  +G +R+V  V G  +I E I  P  
Sbjct: 395 -NPEDYDFYLDLRKYGSVPHAGFGLGLERMVTFVAGTKHIREAIPFPRM 442


>gi|153815221|ref|ZP_01967889.1| hypothetical protein RUMTOR_01455 [Ruminococcus torques ATCC 27756]
 gi|317502320|ref|ZP_07960489.1| asparagine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089924|ref|ZP_08338816.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145847480|gb|EDK24398.1| hypothetical protein RUMTOR_01455 [Ruminococcus torques ATCC 27756]
 gi|316896276|gb|EFV18378.1| asparagine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330403156|gb|EGG82717.1| asparaginyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 463

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 57/359 (15%), Positives = 104/359 (28%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++   ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFQAVFRVRSLAAYAIHKFFQERGFVYVHTPLITGSDCEGAGEM--FRVTTLD 180

Query: 69  QD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            D             K  +     L  S + + +    A    I+ F   +R        
Sbjct: 181 MDQIPKNEDGTVDYTKDFFGKETSLTVSGQLNGETYAQA-FRSIYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M    ++++                  N F+      + E
Sbjct: 240 HAAEFWMIEPEIAFADLEDDMDLAESMLKYVINYV----LENAPEEMNFFNSFVDKGLLE 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                AN D                    ++   +  +  +W           +   +  
Sbjct: 296 RLNNVANSDFARVTYTE-------AIEILEKNNDKFEYKVSWGCDLQTEHERYLTEQVYK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        D  +   R  + 
Sbjct: 349 RPV-FVTDYPKEIKAFYMKQNDDGKTVAAVDCLVPGIGEIIGGSQREDDYEKLLARMNE- 406

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +E    D  F   L      + +G  +GF+R VM +TG +NI +VI  P +
Sbjct: 407 -----LGLDEK---DYGFYLDLRKYGSTRHAGFGLGFERCVMYLTGMSNIRDVIPFPRT 457


>gi|257053788|ref|YP_003131621.1| aspartyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692551|gb|ACV12888.1| aspartyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 434

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 60/334 (17%), Positives = 116/334 (34%), Gaps = 38/334 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     R  +  S+RE F      EI++  +  + G E       TEL    +  +  ++
Sbjct: 131 KAIFEIRAEVLRSVREAFRNLDATEINTPKIVAT-GTEGG-----TELFPITYFGREAFM 184

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   + ++ +G E++F     +R  E     H  E T +++  A   + + M  C 
Sbjct: 185 NQSPQLFKQLMVGSGLERVFEIGPIFRAEEHNTPRHLNEATSIDFESAFYDHTEAMDACE 244

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            +++ A E              N   E E + + E F+           D P       +
Sbjct: 245 TVVKAAYEGVAG----------NCADELETLGLTEVFS-------APEGDFPRLTYEEAI 287

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADP 256
                 A   +     W D  S      +  ++G      +  +P+         +  DP
Sbjct: 288 ERI--NATGEIDDVLVWGDDLSTEAEHALGQDVGE--HYFITDWPSEIKPFYIKDHDDDP 343

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
             +  F++   ++EL +              FE++      +    +     +       
Sbjct: 344 ELSTGFDMMHPSMELVSGGQREHRHDHLVEGFEQQ-----GLDPGAFEY---YTKMFKYG 395

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           MP  +G  +G +RLVM + G  NI E +  P  +
Sbjct: 396 MPPHAGWGLGGERLVMTMLGLENIREAVIFPRDR 429


>gi|110004269|emb|CAK98607.1| putative asparaginyl-trna synthetase protein [Spiroplasma citri]
          Length = 455

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 106/348 (30%), Gaps = 31/348 (8%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R +          R+    ++ E+F +N FI + +  +  +         +F     
Sbjct: 120 AHLRAKTNTFNAVFRIRSSSSFAIHEFFNKNNFIYVHTPIITGNDAEGAGE--SFIVTTR 177

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             D+  +  +     L  S +   +    A    ++ F   +R        H  EF M+E
Sbjct: 178 TDDNYNEDFFGKKASLTVSGQLHAEGFAQA-FRNVYTFGPTFRAENSNTTRHAAEFWMIE 236

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ M     +I+                N +  +        +   R  ++ 
Sbjct: 237 PEIAFIDLEENMALIEKMIKHIINYL-------FVNNSHELAFLNSNVDDKLLKRLKSVI 289

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               +         +L     +       +  W           +   +     T L  Y
Sbjct: 290 NDEFVRLSYTKSIEILQKAVTKGQKFENTNIFWGMDLQTEHERYLCE-IETKKPTFLFNY 348

Query: 242 PAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    A       D +     +L    I EL        D  +  +R     + K    +
Sbjct: 349 PKEIKAFYMKINDDNKTVAACDLLVPGIGELVGGSVRENDYDKIVNRC---NELKIPTID 405

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + ID   L       +S+G  +GF+R VM VTG  NI +VI  P +
Sbjct: 406 LQWYID---LRK-YGYYKSAGFGLGFERFVMYVTGMTNIRDVIPFPRT 449


>gi|295673082|ref|XP_002797087.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226282459|gb|EEH38025.1| lysyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 521

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 64/283 (22%), Positives = 110/283 (38%), Gaps = 19/283 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ I   +R +F    F+E+++  L    G     R F T     +   +PL L+
Sbjct: 221 DILRTRSAIIQYIRNFFFNRSFMEVETPILASVAGGAV-ARPFQT--CATEFPERPLALR 277

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM-- 137
            +PE   K+L+  G +K+F    ++RN      H PEFT  E+Y A+   E L+      
Sbjct: 278 IAPELWLKRLVVGGFDKVFEIGPSFRNE--DNTHNPEFTTCEFYHAYADLETLISTSESL 335

Query: 138 -----NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                  I    +     +         PF   ++I   E    +   +L  T  N    
Sbjct: 336 LTGLSQHIHTHHQTIQSSLSPPPAPFTTPFRRLDFIPALEQAMSHKLPNLTPTSTNNPAT 395

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LAN 250
             H L+         +  + T   + +R+    +EP       T++  +P   S    + 
Sbjct: 396 QIHELFN--NHLNQPLPSNPTLPRLLNRLSSIYLEPQCKE--PTLIINHPECLSPLSKSF 451

Query: 251 IYPAD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
           I+P        R EL+  + E+ N  +E   P EQ+ +FE ++
Sbjct: 452 IHPQCGQAVAARAELFIDSREVMNMYEEENSPFEQKRKFEVQV 494


>gi|206579329|ref|YP_002239422.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|206568387|gb|ACI10163.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 466

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 110/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  S   +      +++   +   ++    +  +   F+E       + 
Sbjct: 244 LAEFWMLEPEVAFASLNDVAGLAEAMLKYVFKAVLEE----RADDMQFFAERVDKDAIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        +  G +  +   W    S      +       
Sbjct: 300 LQRFVSADFAQV-------DYTDAVTILENCGKQFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|327539372|gb|EGF25990.1| asparaginyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 466

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 106/357 (29%), Gaps = 47/357 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI--------- 59
           H R R       +  RN I  S+  +F +  F  + +  +  S       +         
Sbjct: 128 HLRARTNTLGAVMRVRNRISQSIHRFFDDEGFNYLHTPIITASDCEGAGEMFRVTTLNLE 187

Query: 60  ------RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                 R F T    QD  +KP +L  S +   +    A   +++ F   +R        
Sbjct: 188 KLAGSNRPFDT---KQDFFQKPTHLTVSGQLEAETYATA-LSRVYTFGPTFRAENSNTSR 243

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M+     ++           S    + + F+E       +
Sbjct: 244 HLAEFWMVEPEAAFYDLNDNMQLAERFLK----RVFSDCLSHCGEDMDFFNERIEKGKID 299

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                    +    ++    D     L   +   +  +   W           +     +
Sbjct: 300 QLKSV----IEKPFEHMTYTDAVERLLACDE---KFEYPVNWGTDLQAEHERYL--TSVV 350

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               IL  YP+           D +     ++    +       E++   ++  R +   
Sbjct: 351 GGPVILTDYPSSIKPFYMRVSDDGKTVAAMDVLVPGV------GEIIGGSQREERLDVLQ 404

Query: 293 QEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +   +       ++          +G  +G +R V  VTG  NI +VI  P +
Sbjct: 405 RRMAEGGLDESEY-WWYVDLRRYGTVPHAGFGLGLERAVQYVTGMANIRDVIPFPRT 460


>gi|323705368|ref|ZP_08116943.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535270|gb|EGB25046.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 431

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 115/350 (32%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    R++  L  R+ +  S++E+   N F+ IDS  +  S    T      
Sbjct: 116 LDNRHLWIRT--PRQQAILSIRHEVIKSIQEFLNNNDFVRIDSPIITPSTCEGTS----- 168

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +L   D+  +  YL  + +   ++  A    K++ F   +R  +     H  EF M+E 
Sbjct: 169 -DLFQIDYFGENAYLSQTGQLY-QEAAAMALGKVYSFGPTFRAEKSKTRRHLNEFWMVEP 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +   M+    ++    +   +             S+ E I              
Sbjct: 227 EMAFVDHYANMEVQEKLVEYIVQSVLENCSRELKELGRDLSKLEKI-------------- 272

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                    P   L Y +A +   +  ++  W +         +  +   +    +  YP
Sbjct: 273 -------KTPFPRLTYDEAIELLNKNGYEIQWGNDLGSPDETFL--SNQFDKPVFITEYP 323

Query: 243 A-PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++         P      +L            E++       R        K++  E
Sbjct: 324 AKCKAFYMQPKEDRPEVVLCADL-----LAPEGYGEIIGGS---QRIHDYDLLVKRLKEE 375

Query: 302 TYPID--EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             PID  + +L          SG  +G +R V  +T   ++ E I  P +
Sbjct: 376 NLPIDMYDWYLDLRKYGTVPHSGFGLGIERTVAWITNTEHVRECIPFPRT 425


>gi|303236532|ref|ZP_07323117.1| asparagine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483280|gb|EFL46290.1| asparagine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 463

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 110/351 (31%), Gaps = 35/351 (9%)

Query: 13  DFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETH---------- 58
               R   F      R+ +  ++ +YF E+ F    +  +  S      +          
Sbjct: 121 HMRLRTNTFGAVFRIRHHMAMAIHQYFHEHGFYYFHTPLITGSDAEGAGNMFQVTTLDLD 180

Query: 59  --IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
              +A   +    D   K  +L  S +   +    +    I+ F   +R        H  
Sbjct: 181 RVAKAGEVDYNA-DFFGKKTHLTVSGQLEGELGATS-LGAIYTFGPTFRAENSNTPRHLA 238

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A    ++LM    + I+     A                +       E  A
Sbjct: 239 EFWMVEPEVAFIDQQELMDLEEDFIKYCVRWALNNCKDDLEFLNQMIDK-------ELIA 291

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINC 234
           R   +   T +         +L  +AQ++G++       W    S      +        
Sbjct: 292 RLEGVLKDTFVRLTYTEGFEIL-KKAQESGVKFEFPVSEWGMDLSSEHERYLVEKH-FKR 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YP+   +      AD +  +  ++    I       E++    +   +EK + E
Sbjct: 350 PVIMTDYPSQIKSFYMKKNADGKTMQGTDVLFPRI------GEIIGGSVREESYEKLLNE 403

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            +    +    D              G  +GF+RL++ VTG  NI +VI  
Sbjct: 404 IQSRGMKEEVYDWYLDTRKYGTCPHGGFGLGFERLILFVTGMQNIRDVIPF 454


>gi|24373772|ref|NP_717815.1| asparaginyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|38258372|sp|Q8EEZ1|SYN_SHEON RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|24348158|gb|AAN55259.1|AE015664_2 asparaginyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 466

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 111/356 (31%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  +       RN +  ++  ++ EN F+ + +  +  S       +   ST  +
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTLDM 184

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +   +      +++ A         + +  +   F++    TV E 
Sbjct: 244 LAEFWMVEPEVAFATLNDIAGLAEGMLKYAFNAV----LTERMDDLQFFAQHVDKTVIER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + + D           D        Q++G       +W    S      +       
Sbjct: 300 LQSFVSSDFAQV-------DYTDAVEILQKSGREFEFPVSWGIDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDM 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++       D  +   L        +G  +GF+RLV  VTG +NI +VI  P 
Sbjct: 406 RLEEMDL--NKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPR 459


>gi|332523638|ref|ZP_08399890.1| asparagine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314902|gb|EGJ27887.1| asparagine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 448

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 115/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  S  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAIMQIRNAIIYSTYEFFDQNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  +++Q +      ++   +    +      +        +         +  + D 
Sbjct: 236 EYSFLNHDQSLDLQEAYVKALIQGVIDRAPQALEILERDVEALKR--YITEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             +L    + D    Y                 D F       I    G+   T +  YP
Sbjct: 294 AISLLQEHEADEDTDYEHLD-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +   +  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDDYDALVAKMDALEMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KTEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|261868080|ref|YP_003256002.1| asparaginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413412|gb|ACX82783.1| asparaginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 467

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 111/356 (31%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRTDKGAVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F++     V   
Sbjct: 245 LAEFWMIEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RRDDLEFFAKHVDGDVINR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ N D           D         ++G       +W    S      +  +   +
Sbjct: 301 LERFINSDFAQV-------DYTDAIEILLKSGKTFEFPVSWGIDLSSEHERYLAEDYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D       +  A    L     E++   ++  R +   +
Sbjct: 354 PVVVK-NYPKEIKAFYMRLNDD------GQTVAAMDVLAPGIGEIIGGSQREERLDVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMAEMGL--NPEDYWWYRDLRRYGTVPHSGFGLGFERLIVYVTGLQNIRDVIPFPR 460


>gi|227486700|ref|ZP_03917016.1| asparagine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235288|gb|EEI85303.1| asparagine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 462

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 108/357 (30%), Gaps = 43/357 (12%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
                R    R     R+++   L ++F E  F+ ++   +  S       +  F+   I
Sbjct: 119 PHLRPRTNTYRAVFRLRSILAFGLHKFFQERDFVYVNPPIITASDAEGAGEM--FNVTTI 176

Query: 68  IQDH---------------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +                  K  Y+  S +   +    A    ++ F   +R       
Sbjct: 177 DPNDPPRREDGKVDYNKDFFSKKAYMTVSGQLEAEDYALA-FGNVYTFGPTFRAEVSNTP 235

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF MLE   A   Y   M     +I+ A +                F++     + 
Sbjct: 236 RHAAEFWMLEPEMAFADYNVCMDTAEAMIKYAIDYI----LENAKDEMEFFNQWIDKGLI 291

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E   +  N +                    +++G +      W           +   + 
Sbjct: 292 ERLTKLRNSEFARITYT-------KAIELLKESGEKFEFPVEWGMDLQTEHERYLSEKIV 344

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +    F++    +       EL+   ++  R+++ 
Sbjct: 345 DGPV-FVTDYPKDIKAFYMKRNDDGKTVAAFDMLVPGV------GELIGGSQREERYDEL 397

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++       +     +++L          SG  +GF+R +M VTG  NI +VI  P 
Sbjct: 398 VKSMIDNGLKPEEY-QNYLDLRRFGTVVHSGFGLGFERAMMYVTGMKNIRDVIAYPR 453


>gi|329569957|gb|EGG51712.1| asparagine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 450

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/349 (18%), Positives = 117/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L R+ I  +  E+F E  FI+IDS  L   +P         
Sbjct: 129 MDHRHLWLRSS--KQHAIMLVRSEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 179

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 180 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 238

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V+E F R    D
Sbjct: 239 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVSEPFKRITYDD 297

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 298 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 341

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 342 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 396

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 397 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 444


>gi|295096370|emb|CBK85460.1| asparaginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 466

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R  L       R+ +  +L  +F E  +  + +  +  S       +        
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGYFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 60  -RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T     D+      K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRTPEGKVDYDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A             +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFADLNDAAALAEAMLKYVFKAVLEE----RADDMKFFAERVDNDAIAR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G +  +   W    S      +       
Sbjct: 300 LERFVSADFAQV-------DYTDAVAILEKCGEKFENPVYWGVDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + ++   N     D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMQEMGLNPA---DYSWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|229847451|ref|ZP_04467548.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229809592|gb|EEP45319.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|309973185|gb|ADO96386.1| Asparaginyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 467

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|145629371|ref|ZP_01785169.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145638871|ref|ZP_01794479.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|144978214|gb|EDJ87978.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145271843|gb|EDK11752.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309750848|gb|ADO80832.1| Asparaginyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 467

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|326502956|dbj|BAJ99106.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 544

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/335 (15%), Positives = 105/335 (31%), Gaps = 37/335 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  +++  RE+     FI I S  L    S G  +        +   ++  +P 
Sbjct: 236 QAIFRIQCHVENKFREFLFSENFIGIHSPKLIGGSSEGGAS--------VFKLEYNGQPA 287

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  +  G  ++F     +R  +     H  EF  L+     + +   + D
Sbjct: 288 CLAQSPQLYKQMSICGGFGRVFEVGPVFRAEKSNTHRHLCEFIGLDAEMEIKEHYFEVCD 347

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +  A      +    +    N     E +   E   +                   
Sbjct: 348 IIDGLFVAIFKHLNENCQKELETINRQYPFEPLKYLEKTLKLTY---------------E 392

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
                 ++AG  +      +    + L   ++   G     IL RYP             
Sbjct: 393 EGIKMLKEAGTEIEPMGDLNTEAEKKLGRLVKEKYGTE-FFILYRYPLAVRPFYTMPCYD 451

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           DP ++  F+++    E+ +    +  P   R R  +          +   I   ++    
Sbjct: 452 DPAYSNSFDVFIRGEEIISGAQRIHTPELLRKRAIEC-------GIDASTI-ASYIESFS 503

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P   G  +G +R+VML    NNI +    P  
Sbjct: 504 YGAPPHGGFGVGLERVVMLFCALNNIRKTSLFPRD 538


>gi|270290652|ref|ZP_06196876.1| asparaginyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304386174|ref|ZP_07368507.1| asparagine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|270280712|gb|EFA26546.1| asparaginyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304327531|gb|EFL94758.1| asparagine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 463

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 54/373 (14%), Positives = 116/373 (31%), Gaps = 49/373 (13%)

Query: 3   QIPSQPWW----NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +           H R R          R++   ++ E+  +N F+ +++  +  S 
Sbjct: 107 PLQKKHHTPEFLREQAHLRPRTNTFYAVFRIRSLAAFAIHEFLQKNNFVYVNTPLITSSD 166

Query: 53  PGNETHIRAFSTELIIQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKI 97
                 +  F    +  +                 ++P  L  S + + +    A    +
Sbjct: 167 TEGAGEM--FKVTTLDLNNVPKNEEGKVDSTKDFFKQPTNLTVSGQLNAEAFALA-FRDV 223

Query: 98  FCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN 156
           + F  A+R  +     H  EF M+E   A  + + ++    ++++       +      +
Sbjct: 224 YTFGPAFRAEDSHTTRHAAEFWMVEPEMAFANLQDVINVSEDMLKYVINYLLENASDEID 283

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
                  +        A            +   +  D+ L   Q  +  +       W  
Sbjct: 284 FLNQNVDQELR-----ARLEATRDADFAQITYTEAIDKLLAADQEFENKVE------WGI 332

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
                    +   +       +  YP    A       D +     +L    I       
Sbjct: 333 DLQTEHERYLSEKVYQKPV-FITDYPRDIKAFYMRENEDHKTVAAVDLLVPGI------G 385

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTG 335
           EL+   ++  R  K  ++ K+   +     + +L        + SG  +GF+RL+M VTG
Sbjct: 386 ELIGGSQREERLAKLNEKIKEFNLDPEEY-KWYLELRKYGETEHSGFGIGFERLLMYVTG 444

Query: 336 ANNINEVIWTPFS 348
             NI +VI  P +
Sbjct: 445 VENIRDVIPFPRT 457


>gi|163782538|ref|ZP_02177535.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882111|gb|EDP75618.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 296

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 95/317 (29%), Positives = 152/317 (47%), Gaps = 35/317 (11%)

Query: 29  QSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKK 88
            + LR +F    ++E+ +  L   P  ++++     E + +   ++ L+LQTSPE+S KK
Sbjct: 10  INELRTFFRGRGYLEVSTPVLLKFPNLDSNVEPIPVE-VKRRGRKETLWLQTSPEYSMKK 68

Query: 89  LLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           +LA  +  IF  A  +RN E G LH+ EF MLEWYR    Y  L+++   ++R       
Sbjct: 69  ILAEYKRHIFQIAKVFRNDEHGRLHRLEFHMLEWYRIGADYRYLIEEIKELLR------- 121

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                        + E E I+V+EAF ++  I+LG         D   L    +  GI  
Sbjct: 122 ---------ELFGYEEFEEISVSEAFEKHLGIELGE--------DEKDLKASLKDKGIHF 164

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
             ++ W  +F R    ++E  LG +  T L  +P   SALA     +     RFEL+   
Sbjct: 165 QEEEGWETLFYRAF-IEVERRLGFDKPTFLKDFPERLSALA---RVEGGLANRFELFIKG 220

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDR 328
           IE+ N   E  DP E R R + E +++        PIDE+F+A   ++P  +G ++G +R
Sbjct: 221 IEIANGWTEETDPEEVRRRMKTEAEKRN------LPIDEEFIAAHHKIPPCAGCSIGVNR 274

Query: 329 LVMLVTGANNINEVIWT 345
           L ML  G   +N++   
Sbjct: 275 LFMLWVGKETLNDIELF 291


>gi|255564914|ref|XP_002523450.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223537278|gb|EEF38909.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 540

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 103/333 (30%), Gaps = 37/333 (11%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPLYL 78
               ++ + +  R++ +   F EI +  L    S G           +   D+  +P  L
Sbjct: 234 IFRIQSEVGNIFRQFLLSEDFDEIHTPKLIAGSSEGGSA--------VFKLDYKGQPACL 285

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   +  +   +E++F     +R  +     H  EF  L+     + +   + D +
Sbjct: 286 AQSPQLHKQMAICGDKERVFEVGPVFRAEDSYTHRHLCEFVGLDVEMEIKKHYSEVMDIV 345

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +         +    +          E +       R                     
Sbjct: 346 DRLFVKMFDYLNEKCKKELDAVCRQYPFEPLKYLRKTLR---------------LRFEEG 390

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
               ++AG+ V      +    R L + +    G     IL RYP             D 
Sbjct: 391 IQMLKEAGVEVDPYGDLNTEAERKLGQLVLEKYGTE-FYILHRYPLAVRPFYTMPCYDDA 449

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
           +++  F+++    E+ +    +  P     R       K    + +      ++      
Sbjct: 450 KYSNSFDVFIRGEEIISGAQRVHVPELLEER------AKACGIDVSTI--STYIDSFRYG 501

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P   G  +G +R++ML  G NNI +    P  
Sbjct: 502 APPHGGFGVGLERVIMLFCGLNNIRKTSLFPRD 534


>gi|110639549|ref|YP_679759.1| asparaginyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|122966545|sp|Q11Q97|SYN_CYTH3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|110282230|gb|ABG60416.1| asparagine--tRNA ligase [Cytophaga hutchinsonii ATCC 33406]
          Length = 464

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 114/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R R       L  R+ +  ++  +F E  F+ + +  +  S           T L +
Sbjct: 123 AHLRPRTNTFSCVLRLRHAMAFAVHSFFNEKGFVYVHTPIITGSDAEGAGAMFQVTTLDL 182

Query: 69  QD---------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
           ++            K  +     L  S +    +L A    +++ F   +R        H
Sbjct: 183 KNPSKTKEGEVDFTKDFFGKATNLTVSGQL-EGELAAMALGEVYTFGPTFRAENSNTTRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M      ++   + A        N     + +       E 
Sbjct: 242 LAEFWMIEPEMAFYEIQDNMDLAEEFLKYLVKYALDNCIDDLNFLNEMYDK-------EL 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R  ++     +         +L    Q+   +V       D+ S      +E +    
Sbjct: 295 IERLKSVVETPFVRLNYTEAVDILIATKQKFEYKVEWGI---DLQSEHERYLVEKH--FK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              IL  YP    A       D +  +  ++    I       +  D +E     + + +
Sbjct: 350 KPVILTNYPKAIKAFYMKANEDGKTVRAMDVLFPGIGEIIGGSQREDNLE-----KLQER 404

Query: 294 EKKKIYNETYPID-EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K+      +  D   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 405 CKEVG---IHENDIWWYLETRKFGSAPHSGFGLGFERLMLFVTGMGNIRDVIPFPRT 458


>gi|257883094|ref|ZP_05662747.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257818752|gb|EEV46080.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,502]
          Length = 432

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 110/349 (31%), Gaps = 41/349 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F ++ F++ID   L   +P         
Sbjct: 115 MDHRHLWLRSS--RQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 166 TTDLFETNYFDQKAYLSQSGQLYMEAAAMA-FGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      +   E        D
Sbjct: 225 PEMAFTHQEESLEVQEQYVAFLVQNV--------------------LDHCEYALDVLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTILDR 240
                     P   + Y  A +   +   DD  W + F       I           +  
Sbjct: 265 KEVLKTYTKLPFPRITYDDAIELLKKNGFDDIEWGEDFGSPHETFIA--NSFEQPVFILN 322

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP             P  T+   +   ++       E++   E+   ++  +++ +    
Sbjct: 323 YPKAIKPFYM----KPHPTREDVVICADMIAPEGYGEIIGGSERATDYDFLLEQIRNHGL 378

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +       +L          SG  +G +R V  + G +++ E I  P  
Sbjct: 379 DEKEY-SWYLDLRKYGSVPHSGFGLGLERTVTWIAGIDHVREAIPFPRL 426


>gi|254413364|ref|ZP_05027135.1| asparaginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196179984|gb|EDX74977.1| asparaginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 463

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 105/359 (29%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE--- 65
           H R R       L  RN   +++ ++F E  F+ I S  +  S       +  F+     
Sbjct: 123 HLRSRTNTIGAVLRVRNACANAIHQFFQERGFLWIHSPIITASDCEGAGEL--FTVTNLN 180

Query: 66  ------------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          QD   +  YL  S +    +++A     ++ F   +R        
Sbjct: 181 LNEIPKTEDQLVDFSQDFFGRQAYLTVSGQLQA-EVMAMTFGNVYTFGPTFRAENSNTSR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +  M      ++       +                   T   
Sbjct: 240 HLAEFWMVEPEMAFCDLQGDMDLAEEFLKYVFSSVLENCPEDMEFFNKRIDNSVLATA-- 297

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                         +  ++        Q ++A  +  +   W           +      
Sbjct: 298 ---------DNIINNQFERITYTDAIAQLEKADRKFEYPVEWGTDLQSEHERYLAEE-LF 347

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--K 290
               I+  YP    A       D +             L     E++   ++  R +  +
Sbjct: 348 QKPVIVSDYPVGIKAFYMRLNEDGKTVAAM------DVLAPKIGEIIGGSQREERLDVLQ 401

Query: 291 EMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  + + +  E +     +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 402 QRIQNQGMNPEEF---WWYLDLRRYGTVAHAGFGLGFERLVQFMTGMGNIRDVIPFPRT 457


>gi|69247321|ref|ZP_00604303.1| Asparaginyl-tRNA synthetase, class IIb [Enterococcus faecium DO]
 gi|257879983|ref|ZP_05659636.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257884121|ref|ZP_05663774.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257890492|ref|ZP_05670145.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894419|ref|ZP_05674072.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614366|ref|ZP_05712136.1| asparaginyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260558925|ref|ZP_05831112.1| asparaginyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261209448|ref|ZP_05923811.1| asparaginyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566625|ref|ZP_06447044.1| asparaginyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293553818|ref|ZP_06674433.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293559763|ref|ZP_06676283.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294616367|ref|ZP_06696160.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294622013|ref|ZP_06701156.1| asparaginyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314950178|ref|ZP_07853463.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|68194891|gb|EAN09362.1| Asparaginyl-tRNA synthetase, class IIb [Enterococcus faecium DO]
 gi|257814211|gb|EEV42969.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257819959|gb|EEV47107.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257826852|gb|EEV53478.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830798|gb|EEV57405.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260075033|gb|EEW63348.1| asparaginyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260076576|gb|EEW64340.1| asparaginyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161566|gb|EFD09447.1| asparaginyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291590881|gb|EFF22597.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291598403|gb|EFF29477.1| asparaginyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291602024|gb|EFF32261.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291606246|gb|EFF35660.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313643488|gb|EFS08068.1| asparaginyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 432

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 110/349 (31%), Gaps = 41/349 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F ++ F++ID   L   +P         
Sbjct: 115 MDHRHLWLRSS--RQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 166 TTDLFETNYFDQKAYLSQSGQLYMEAAAMA-FGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      +   E        D
Sbjct: 225 PEMAFTHQEESLEVQEQYVAFLVQNV--------------------LDHCEYALDVLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTILDR 240
                     P   + Y  A +   +   DD  W + F       I           +  
Sbjct: 265 KEVLKTYTKLPFPRITYDDAIELLKKNGFDDIEWGEDFGSPHETFIA--NSFEQPVFILN 322

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP             P  T+   +   ++       E++   E+   ++  +++ +    
Sbjct: 323 YPKAIKPFYM----KPHPTREDVVICADMIAPEGYGEIIGGSERATDYDFLLEQIRNHGL 378

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +       +L          SG  +G +R V  + G +++ E I  P  
Sbjct: 379 DEKEY-SWYLDLRKYGSVPHSGFGLGLERTVTWIAGIDHVREAIPFPRL 426


>gi|162454192|ref|YP_001616559.1| asparaginyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|226695301|sp|A9GBR2|SYN_SORC5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|161164774|emb|CAN96079.1| asparaginyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
          Length = 446

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/347 (16%), Positives = 109/347 (31%), Gaps = 27/347 (7%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAF 62
           +  +  W R    R+   L  R+ I  ++R++F    F  +D+     +     + +  F
Sbjct: 119 MDHRHLWLRSK--RQHAILRVRHTIIQAIRDFFDGRGFTLVDAPVFTPNACEGTSTL--F 174

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T     D+  +  YL  S +   +   AA   K +CF   +R  +     H  EF M+E
Sbjct: 175 QT-----DYHGEKAYLTQSGQLYMEAA-AAAFGKAYCFGPTFRAEKSKTRRHLAEFWMVE 228

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A       M    + +    E   ++      V      + E +       RY   D
Sbjct: 229 PEVAFMDLAGDMDLAEDFLCFIVERVLERRRPELAVLERDVGKLEAVKKPFPRIRY---D 285

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               + N  + ++  +  +A+        D  W + F       I  +   +   ++ RY
Sbjct: 286 EAVAILNEARAEKRKMAGEAE------IPDFPWGEDFGGEDETII--SGRYDRPVMIHRY 337

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           PA   A           T        ++       E++   ++        +  +     
Sbjct: 338 PAQVKAFYMKRDP----TDDRLALCVDVLAPEGYGEVIGGGQREDDLATLERAIEAHQLP 393

Query: 302 TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                             +G  +G +R V  + G  ++ E I  P  
Sbjct: 394 PEAFGWYLDLRRYGTFPHAGFGLGVERSVAWICGLPHVRETIPFPRM 440


>gi|110801719|ref|YP_699756.1| asparaginyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|122956479|sp|Q0SQ51|SYN_CLOPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|110682220|gb|ABG85590.1| asparaginyl-tRNA synthetase [Clostridium perfringens SM101]
          Length = 465

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 102/358 (28%), Gaps = 45/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F +  F+   +  L  S       +  F    +
Sbjct: 124 AHLRPRSNAFSATFRVRSVAAYAIHKFFQDQGFVYTHTPILTGSDCEGAGEM--FRVTTL 181

Query: 68  IQDH----------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +  +     L  S +    +  A     I+ F   +R       
Sbjct: 182 DMMAPPISEEGGIDFSQDFFGKETNLTVSGQL-NAECFALAFRNIYTFGPTFRAENSNTV 240

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+   N+++   +    +           F++     + 
Sbjct: 241 KHAAEFWMIEPEMAFADLIDDMEVAENMLKYVIKYVMDECPE----EIAFFNQFVDKGLL 296

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N + G                  Q++G    +   W           +   + 
Sbjct: 297 ERLNHVVNSEFGKVTYTE-------AVKLLQESGKEFEYPVEWGIDLQTEHERYLTEQIF 349

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +     I       E++   ++  R +  
Sbjct: 350 KKPV-FVTDYPKDIKAFYMRLNEDGKTVAAMDCLVPGI------GEIIGGSQREERLDVL 402

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                ++          +L          SG  +GF+RL+M +TG  NI +VI  P +
Sbjct: 403 KARMAELNLNEEDY-WWYLELRKYGETVHSGFGLGFERLIMYITGMANIRDVIPFPRT 459


>gi|300716101|ref|YP_003740904.1| Asparaginyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299061937|emb|CAX59053.1| Asparaginyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 466

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 108/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +   +A   KI+ F   +R        H
Sbjct: 185 ENLPRTPEGKVNFDEDFFGKEAFLTVSGQLNGETYASAIS-KIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E        +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEIAFADLEDNAALAEAMLKYVFKAVLEE----RRDDMEFFAERVDKDAIAR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D           G +  +  +W    S      +       
Sbjct: 300 LERFVTTDFAQV-------DYTEAVEILIACGEKFENAVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIAFPRT 460


>gi|261880057|ref|ZP_06006484.1| asparagine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333298|gb|EFA44084.1| asparagine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 465

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/354 (16%), Positives = 102/354 (28%), Gaps = 35/354 (9%)

Query: 13  DFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
               R   F      R+ +  ++ +YF E+ F    S  +  S       +  F    + 
Sbjct: 123 HMRLRTNTFGAVFRIRHNMAIAIHKYFHEHGFYYFHSPIITASDAEGAGEM--FQVTTLD 180

Query: 69  QD--------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
            D           K  +     L  S +   +    A    I+ F   +R        H 
Sbjct: 181 LDRVAKSGKVEYDKDFFGKKTSLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPRHL 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    ++LM    + I+     A        +           +      
Sbjct: 240 AEFWMIEPEVAFMDQKELMDLEEDFIKYCVRWALDNCRDDLDF-------LNRMIDKNLI 292

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               ++     +         +L                W    S      +        
Sbjct: 293 QTLESVVHEEFVRLTYTEGIEILQKTVDGGHKFEFPITGWGMDLSSEHERYLVEQY-FKR 351

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YPA   A       D +  +  ++    I       E++    +    +K + E
Sbjct: 352 PVIMTDYPAEIKAFYMKKNEDGKTMQGTDVLFPRI------GEIIGGSVREENLDKLVNE 405

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K    E++  D             +G  +GF+RL++ VTG  NI +VI  P +
Sbjct: 406 IKARGMESHAYDWYLDTRKYGSCPHAGFGLGFERLILFVTGMQNIRDVIPFPRT 459


>gi|87310517|ref|ZP_01092646.1| asparaginyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87286738|gb|EAQ78643.1| asparaginyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 463

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 104/359 (28%), Gaps = 48/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  S+  +F E  F+ + +  +  S       +  F    +
Sbjct: 123 AHLRPRTNTFGAVFRVRNCVSRSIHNFFQERGFLYVHTPIITASDCEGAGEM--FKVTTL 180

Query: 68  IQDH--------------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
             D                 +P YL  S +   +    A    ++ F   +R        
Sbjct: 181 DLDAPPKTGGKVDYTQDFFERPSYLTVSGQLEGEIFATA-LGNVYTFGPTFRAENSNTSR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M+   + I+       +          +   +    T+  
Sbjct: 240 HLAEFWMVEPEMAFVDLEGNMQVAEDFIKRIISDVMRDCGDDLQFFNDRIDDTVLATLTA 299

Query: 173 A-FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
                +  +     +D               ++G +  +   W           +     
Sbjct: 300 MADGEFLRVSYTDAID------------ILLKSGRKFDYKVEWGTDLQSEHERFLTEVH- 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                IL  YP            D +  +          L     E++   ++  R +  
Sbjct: 347 FKRPVILHDYPRTIKPFYMRCNDDGKTVRAM------DVLAPKVGEIIGGSQREERLDVL 400

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E + +++  N        ++          SG  +G +R++  +TG  NI +VI  P +
Sbjct: 401 EQRMQEQGLNPADY--WWYVELRKYGTIPHSGFGLGLERILQFITGMGNIRDVIPFPRT 457


>gi|295110405|emb|CBL24358.1| aspartyl-tRNA synthetase, archaeal type [Ruminococcus obeum A2-162]
          Length = 443

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/335 (15%), Positives = 109/335 (32%), Gaps = 42/335 (12%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLY 77
           R     +  +  + R++  E  F EI +  +         ++  FS       +  KP  
Sbjct: 140 RSKFKIQEALTRAFRDFLYEQGFTEIHTPKIGARGAEGGANLFKFS-------YFHKPAV 192

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+F  +  +    +++F     +R  +     H  E+T L++   +    + +   
Sbjct: 193 LAQSPQFYKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFEDIMGM 251

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
                  A    +K ++ +                    +   I+L      P       
Sbjct: 252 ETGFLQYAMKLLKKDYAKE-------------------LQILKIELPKVDQIPAVRFDKA 292

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA-D 255
             L A++   ++ +          ++    +     +    +  YP+ +     +    D
Sbjct: 293 KELVAEKYNRKIRNPYDLEPEEEALIGRYFKEEYDAD-FVFVTHYPSKKRPFYAMDDPAD 351

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK-KKIYNETYPIDEDFLACLT 314
            +FT  F+L    +E+      + D          +++ K      E   + E +L    
Sbjct: 352 DKFTLSFDLLFHGLEVTTGGQRIHDYN--------QLKAKIAARGMEEDGM-EQYLDTFK 402

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             MP   G+ +G +RL M + G  N+ E    P  
Sbjct: 403 HGMPPHGGLGIGLERLTMQLLGEENVREACLFPRD 437


>gi|116621920|ref|YP_824076.1| asparaginyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122254422|sp|Q023P9|SYN_SOLUE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116225082|gb|ABJ83791.1| asparaginyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 461

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/352 (16%), Positives = 107/352 (30%), Gaps = 37/352 (10%)

Query: 15  HYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST---- 64
           H R R          RN +  ++ ++F +  F+ + +  +  S       +   +T    
Sbjct: 123 HLRTRSNTFGAVFRVRNALACAIHKFFQDRGFMYVHTPVISASDAEGAGSMFQVTTLDLQ 182

Query: 65  ----ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                    D   K  YL  S +    ++ A     ++ F   +R        H  EF M
Sbjct: 183 SPKPADFTGDFFGKHTYLTVSGQLEA-EIFAHAFANVYTFGPTFRAENSNTPRHLAEFYM 241

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   A    +         ++   E          +     +      T+         
Sbjct: 242 IEPEMAFCDLKDNQDLAEAFLKSQVEYVVNACGPDLDFLAKWYDPELRKTL--------- 292

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
              G    + ++          Q++G        W           +      N   I+ 
Sbjct: 293 --DGLMNASFERITYTEAIDLLQRSGRSFEFPTQWGSDMQSEHERYLTEE-VFNKPVIVT 349

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACD---ELLDPIEQRHRFEKEMQEKK 296
            YP    A       D +     ++ A  I          E  D + QR R       ++
Sbjct: 350 DYPKDIKAFYMRGNDDGKTVAAMDVLAPRIGEIIGGSQREERHDVLLQRIREMAAHGLRE 409

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + Y   + +D   L       + +G  MGF+R++M +TG  NI +VI  P +
Sbjct: 410 EAY--WWYLD---LRRFGG-VEHAGFGMGFERMLMYLTGMKNIRDVIPFPRT 455


>gi|255950584|ref|XP_002566059.1| Pc22g21630 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211593076|emb|CAP99451.1| Pc22g21630 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 967

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 113/334 (33%), Gaps = 27/334 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     +    +  R    + +F+EI +  LQ +   E+    F       ++  +P +
Sbjct: 298 SQSIFRIQAATCNLFRAALDDREFVEIHTPKLQGAA-TESGASVFQV-----NYFGRPAF 351

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +AA   +++     +R        H  E+T L+   A E +   M + 
Sbjct: 352 LAQSPQLAKQMAIAADFGRVYEIGAVFRAENSNTHRHLTEYTGLDLEMAIEEHYHEMLET 411

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +              +          E +   E        D    L++    +   
Sbjct: 412 LDAVIKNILKGLYTKHRREVELVKCQFPSEDVVWLEKTPIIRFTDGIKMLNDSGWLNED- 470

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                   G ++  D+         L E ++   G +   +LD++P             D
Sbjct: 471 --------GEQLPLDEDLGTRDEIRLGELVKEQYGTD-YYVLDKFPRSARPFYTMPDAED 521

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            ++T  F+++    E+ +    + D         +E   +  I  +     E++L     
Sbjct: 522 DKYTNSFDMFIRGQEIVSGGQRIHDVHML-----EENMRRVGINPDDM---EEYLEGFRW 573

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             P  +G  +G +R+VML+    NI      P  
Sbjct: 574 GAPPHAGAGVGLERIVMLILKLGNIRLTSMFPRD 607


>gi|260581351|ref|ZP_05849167.1| asparaginyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1574761|gb|AAC22949.1| asparaginyl-tRNA synthetase (asnS) [Haemophilus influenzae Rd KW20]
 gi|260092018|gb|EEW75965.1| asparaginyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 477

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 136 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 195

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 196 ENLPRSENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 254

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 255 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 310

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 311 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 363

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 364 PVVVK-NYPKDIKAFYMRLNDDEKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 416

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 417 RMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 470


>gi|301170040|emb|CBW29644.1| asparaginyl tRNA synthetase [Haemophilus influenzae 10810]
          Length = 467

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 111/356 (31%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + E   K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLEDNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDEKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|156934577|ref|YP_001438493.1| asparaginyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|156532831|gb|ABU77657.1| hypothetical protein ESA_02411 [Cronobacter sakazakii ATCC BAA-894]
          Length = 441

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 107/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 100 AHLRPRTNLIGAVARVRHTLAQALHRFFHEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 159

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 160 ENLPRDAQGKIDFDKDFFGKEAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTSRH 218

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +    +    +  +   F+E       E 
Sbjct: 219 LAEFWMLEPEVAFANLNDVAGLAEAMLKYVFKAVLDE----RMDDMKFFAERVDKEAIER 274

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G +  +   W    +      +       
Sbjct: 275 LERFISADFAQV-------DYTDAVAILEKCGEKFENPVYWGVDLASEHERYLAEKHFKA 327

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 328 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 380

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 381 RMDEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 435


>gi|67611498|ref|XP_667160.1| asparaginyl-tRNA synthetase [Cryptosporidium hominis TU502]
 gi|54658269|gb|EAL36932.1| asparaginyl-tRNA synthetase [Cryptosporidium hominis]
          Length = 499

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 114/381 (29%), Gaps = 55/381 (14%)

Query: 3   QIPSQPW---WNRDF-HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +     + R+  H R R       +  RN +  ++ EYF +N F+ I +  +  + 
Sbjct: 131 PLAKKHHSKEFLREVGHLRPRSQFFSSVMRIRNSLAFAIHEYFQKNGFLYIHTPIITAAD 190

Query: 53  PGNETHIRAFSTELIIQ-------------------------DHIRKPLYLQTSPEFSCK 87
                 +   +T L  +                         D   K  YL  S + + +
Sbjct: 191 CEGAGEMFQVTTVLPPESRNNISNIPASKIEGSQDMAVDYKKDFFGKASYLTVSGQLALE 250

Query: 88  KLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV 146
               +  + ++ F   +R        H  EF M+E   A       MK    +++   E 
Sbjct: 251 NFACSMSD-VYTFGPTFRAENSHTTRHLAEFWMIEPEMAFADLSDNMKLGEGLLKYTVEY 309

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
                      +     +     + E        +              +L    ++  +
Sbjct: 310 V----LINNMPDLLYLDKNIENGLVERLKIICKEEFARISY---TEAIEMLKPHDKEFTV 362

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
            V+          + + + +E         I+  YP    +       D       ++  
Sbjct: 363 PVSWGMDLGSEHEKYITDVLEKK-----PCIIYNYPKDIKSFYMKLNEDGNTVAAMDILV 417

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGF 326
             I       +  D IE+          K +  +       + L         SG  +GF
Sbjct: 418 PKIGEVIGGSQREDDIEKLE-----NAIKSRNMDPAPYWWYNELRK-YGSVPHSGFGLGF 471

Query: 327 DRLVMLVTGANNINEVIWTPF 347
           +RL+M+VTG  N+ +VI  P 
Sbjct: 472 ERLIMMVTGVENVRDVIPFPR 492


>gi|68058161|gb|AAX88414.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 502

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 161 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 220

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 221 ENLPRSENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 279

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 280 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 335

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 336 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 388

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 389 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 441

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 442 RMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 495


>gi|18311482|ref|NP_563416.1| asparaginyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|110798948|ref|YP_697187.1| asparaginyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168205760|ref|ZP_02631765.1| asparaginyl-tRNA synthetase [Clostridium perfringens E str.
           JGS1987]
 gi|168209738|ref|ZP_02635363.1| asparaginyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|168213424|ref|ZP_02639049.1| asparaginyl-tRNA synthetase [Clostridium perfringens CPE str.
           F4969]
 gi|168217617|ref|ZP_02643242.1| asparaginyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|169343330|ref|ZP_02864340.1| asparaginyl-tRNA synthetase [Clostridium perfringens C str.
           JGS1495]
 gi|182624293|ref|ZP_02952078.1| asparaginyl-tRNA synthetase [Clostridium perfringens D str.
           JGS1721]
 gi|20139876|sp|P58693|SYN_CLOPE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122958654|sp|Q0TMF3|SYN_CLOP1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|18146166|dbj|BAB82206.1| asparagine-tRNA ligase [Clostridium perfringens str. 13]
 gi|110673595|gb|ABG82582.1| asparaginyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|169298628|gb|EDS80709.1| asparaginyl-tRNA synthetase [Clostridium perfringens C str.
           JGS1495]
 gi|170662749|gb|EDT15432.1| asparaginyl-tRNA synthetase [Clostridium perfringens E str.
           JGS1987]
 gi|170712107|gb|EDT24289.1| asparaginyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|170715076|gb|EDT27258.1| asparaginyl-tRNA synthetase [Clostridium perfringens CPE str.
           F4969]
 gi|177910511|gb|EDT72884.1| asparaginyl-tRNA synthetase [Clostridium perfringens D str.
           JGS1721]
 gi|182380304|gb|EDT77783.1| asparaginyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 465

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 102/358 (28%), Gaps = 45/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F +  F+   +  L  S       +  F    +
Sbjct: 124 AHLRPRSNAFSATFRVRSVAAYAIHKFFQDQGFVYTHTPILTGSDCEGAGEM--FRVTTL 181

Query: 68  IQDH----------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +  +     L  S +    +  A     I+ F   +R       
Sbjct: 182 DMMAPPIAEEGGIDFSQDFFGKETNLTVSGQL-NAECFALAFRNIYTFGPTFRAENSNTV 240

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+   N+++   +    +           F++     + 
Sbjct: 241 KHAAEFWMIEPEMAFADLIDDMEVAENMLKYVIKYVMDECPE----EIAFFNQFVDKGLL 296

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N + G                  Q++G    +   W           +   + 
Sbjct: 297 ERLNHVVNSEFGKVTYTE-------AVKLLQESGKEFEYPVEWGIDLQTEHERYLTEQIF 349

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +     I       E++   ++  R +  
Sbjct: 350 KKPV-FVTDYPKDIKAFYMRLNEDGKTVAAMDCLVPGI------GEIIGGSQREERLDVL 402

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                ++          +L          SG  +GF+RL+M +TG  NI +VI  P +
Sbjct: 403 KARMAELNLNEEDY-WWYLELRKYGETVHSGFGLGFERLIMYITGMANIRDVIPFPRT 459


>gi|311030328|ref|ZP_07708418.1| asparaginyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 430

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 112/351 (31%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    ++   +  RN +  +  E+F +N F ++D   L   +P   + +  F
Sbjct: 114 MDNRHLWLRSK--KQHAIMKIRNEVIRATYEFFNDNGFSKVDPPILTGSAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+     +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 170 ATK-----YFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  +      +    +   +       +     S+ E I     F R +  D
Sbjct: 224 PEMAFYEFEDNLVVQEQYVSFIVQSVVKNCKLELGILDRDVSKLEKI--QAPFPRISYDD 281

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               +    +   D  W D F       I  +   +    +  Y
Sbjct: 282 ------------------AIKFLNEKGFDDIQWGDDFGAPHETAIAESY--DMPVFITHY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P          +P         +L A     E+    + + D    + R E+   E    
Sbjct: 322 PTGIKPFYMQPHPERDDVVLCADLIAPEGYGEIIGGSERIHDYDLLKQRLEEHNLESDAY 381

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   + +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 382 --------KWYLELRQYGSVPHSGFGLGLERTVAWISGTEHVREAIPFPRL 424


>gi|113460899|ref|YP_718966.1| asparaginyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123031243|sp|Q0I2M9|SYN_HAES1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|112822942|gb|ABI25031.1| asparaginyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 467

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 109/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRTDKGAVDFSQDFFGKESFLTVSGQLNGESYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++           + +  +   F +     V   
Sbjct: 245 LAEFWMVEPEIAFATLADNAKLAEDMLKYVFRAV----LNEREDDLKFFEKHVDKNVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G       +W    S      +      +
Sbjct: 301 LKDFINSDFA-------QIDYTDAIDILLKSGKAFEFPVSWGIDLSSEHERYLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++  +    D  +   L        +G  +GF+RL++ VTG  NI +VI  P +
Sbjct: 407 RIAEMGLKAE--DYWWYRDLRRYGTVPHAGFGLGFERLIVYVTGVQNIRDVIPFPRT 461


>gi|148827002|ref|YP_001291755.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166231667|sp|A5UF16|SYN_HAEIG RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148718244|gb|ABQ99371.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 467

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRSENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|293568613|ref|ZP_06679928.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|293571665|ref|ZP_06682686.1| asparaginyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291588573|gb|EFF20406.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291608335|gb|EFF37636.1| asparaginyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 432

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 110/349 (31%), Gaps = 41/349 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F ++ F++ID   L   +P         
Sbjct: 115 MDHRHLWLRSS--RQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTDLFETNYFDQKAYLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      +   E        D
Sbjct: 225 PEMAFTHQEESLEVQEQYVAFLVQNV--------------------LDHCEYALDVLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTILDR 240
                     P   + Y  A +   +   DD  W + F       I           +  
Sbjct: 265 KEVLKTYTKLPFPRITYDDAIELLKKNGFDDIEWGEDFGSPHETFIA--NSFEQPVFILN 322

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP             P  T+   +   ++       E++   E+   ++  +++ +    
Sbjct: 323 YPKAIKPFYM----KPHPTREDVVICADMIAPEGYGEIIGGSERATDYDFLLEQIRNHGL 378

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +       +L          SG  +G +R V  + G +++ E I  P  
Sbjct: 379 DEKEY-SWYLDLRKYGSVPHSGFGLGLERTVTWIAGIDHVREAIPFPRL 426


>gi|23099214|ref|NP_692680.1| asparaginyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|38258374|sp|Q8EQE2|SYN_OCEIH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|22777442|dbj|BAC13715.1| asparagine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 430

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 64/352 (18%), Positives = 114/352 (32%), Gaps = 48/352 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  S  EYF +  F+++D   L   S          
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEIIRSTYEYFNKEGFVKVDPPILTGSSAEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFDEEAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E+ ++   N +    +          +V     S+ E I        Y    
Sbjct: 224 PEMAFVEHEESLQIQENYVSHIVQSVLTNCKLELSVLDRDLSKLEKIKAPFPRISY---- 279

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++ G     D  W + F       I  +   +    +  Y
Sbjct: 280 -------------DEAIDMLKEKGFD---DIEWGEDFGAPHETAIAESY--DMPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++    QR     +++  ++ Y 
Sbjct: 322 PKDIKAFYMKPHPDRSDVVLCADLIAP-----EGYGEIIGGS-QR---IDDLELMEQRYE 372

Query: 301 E---TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E   T P  + +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 373 EHGLTGPAYQWYLELRKYGSVPHSGFGLGLERTVAWLSGVEHVRETIPFPRL 424


>gi|147792043|emb|CAN72992.1| hypothetical protein VITISV_022939 [Vitis vinifera]
          Length = 160

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 3/134 (2%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           ++   +E        T +  +P   S LA  + +    T+RFEL+    ELCNA  EL D
Sbjct: 4   LVGHFLEEACV--NPTFIINHPEIMSPLAKWHRSKQSMTERFELFVNKHELCNAYTELND 61

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           P+ QR RF +++++++   +E   +DE F   L   +P + G  +G DRL M++T + NI
Sbjct: 62  PVVQRQRFAEQLKDRQSGDDEAMALDETFCMALEYGLPPTGGWGLGIDRLTMMLTDSQNI 121

Query: 340 NEVIWTPFSQSNQE 353
            EV+  P  +   E
Sbjct: 122 KEVLLFPAMKPQDE 135


>gi|220929973|ref|YP_002506882.1| asparaginyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|220000301|gb|ACL76902.1| asparaginyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 464

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 104/355 (29%), Gaps = 41/355 (11%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++   ++ ++F E  F+ + +  +  S       +   +T  + 
Sbjct: 124 HLRPRTNTFSAVFRVRSLAAFAIHKFFNERGFVYVHTPLITGSDCEGAGQMFRVTTLDMK 183

Query: 69  Q-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
                         D   K   L  S + + +    A  + I+ F   +R        H 
Sbjct: 184 NPPRQKEGDIDYSKDFFEKETSLTVSGQLTGEAYALA-FKNIYTFGPTFRAENSNTARHA 242

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    +  M     +++                    F+      + E  
Sbjct: 243 AEFWMIEPEIAFADLKDDMILAEEMLKYVINYV----LENAPEEMQFFNSFVDKGLLERL 298

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
           A   N D                    ++   +  +   W           I   +    
Sbjct: 299 ANVVNSDFAHITYTE-------AIEILEKNKDKFEYPVEWGVDLQTEHERYITEQVYKKP 351

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  YP    A       D +     +L    +       E++   ++  R +   + 
Sbjct: 352 V-FVTDYPKEIKAFYMRVNDDNKTVAAMDLLVPGV------GEIIGGSQREERLDTLEKR 404

Query: 295 KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ++        + ++        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 405 MDEMGLNKEDY-QWYIDLRKYGGTKHAGFGLGFERAIMYLTGITNIRDVIPFPRT 458


>gi|313113843|ref|ZP_07799409.1| OB-fold nucleic acid binding domain protein [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310623809|gb|EFQ07198.1| OB-fold nucleic acid binding domain protein [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 444

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/323 (16%), Positives = 113/323 (34%), Gaps = 35/323 (10%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               ++   +++R++ ++  FIEI +  L  +  +E+    F       D+  +  YL  
Sbjct: 142 MFKAQSCFVNAMRKFLLDRNFIEIHTPKLI-AAASESGSEVFKV-----DYFDRNAYLAQ 195

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+F  +  +AAG E+IF     +R  +     H  EF+  +   ++ +  + +      
Sbjct: 196 SPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHSTEFSGFDLEFSYITSYKDVMKMEEE 255

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +  A   A +  +  Q            +   E         +    D     +    Y 
Sbjct: 256 LLTAGLQAVKDNYGDQIKE---------MFGQEVIVPTTPFPVVKLADLYKGLEEEFGYT 306

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
                 +  +     +    R+  E ++ + G      +  Y A + A  ++   +    
Sbjct: 307 ------VDESEKGDLTTEAERLSYEWVKKHYGHE-FLFITDYSAEKRAFYHMRDEN-GVP 358

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           + ++L    +E+            +    +K+ +EK    +      + +L       P 
Sbjct: 359 QGYDLIWRGVEITTGAQREH----RYEVLKKQAEEKGLADDV-----KFYLEFFQYGCPP 409

Query: 319 SSGIAMGFDRLVMLVTGANNINE 341
             G  +G DRL ML+ G   I +
Sbjct: 410 HGGFGLGIDRLTMLLCGL-TIKD 431


>gi|307152637|ref|YP_003888021.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306982865|gb|ADN14746.1| asparaginyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 463

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R       +  RN   +++  +F E  F+ + +  +  +       +  F+    
Sbjct: 122 AHLRGRTNTLGAVMRVRNACANAIHRFFQERGFLWVHTPIITANDCEGAGEL--FTVTNL 179

Query: 66  -------------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  YL  S +    +++A   + ++ F   +R       
Sbjct: 180 DLKKLPRNEQQGIDFSQDFFGKRAYLTVSGQLEA-EIMALAFQNVYTFGPTFRAENSNTS 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +         ++   +            +   F++    TV 
Sbjct: 239 RHLAEFWMVEPEMAFCDLDGDQDLAEAFLKYIFKSVLDSCLE----DMEFFNQRIDNTVL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N + G                  ++A  +  +   W           +   L 
Sbjct: 295 ETAENIINNEFGRITYTE-------AIELLEKADRKFEYPVEWGIDLQSEHERYLAEELF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                I+  YP    A       D +             L     E++   ++  R    
Sbjct: 348 KKPL-IVTNYPKDIKAFYMRLNDDNKTVAAM------DVLAPKIGEIIGGSQREERLNVL 400

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +  K++      +   +L          +G  +GF+R+V  +TG  NI +VI  P +
Sbjct: 401 EERIKQMGMLPEDL-WWYLDLRRFGTVPHAGFGLGFERVVQFMTGMGNIRDVIPFPRT 457


>gi|218887177|ref|YP_002436498.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218758131|gb|ACL09030.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 471

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 103/360 (28%), Gaps = 47/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-----------------Y 51
            H R R          R+    ++ E+F E  F  + +  L                   
Sbjct: 128 AHLRARTNKFGAAFRIRSEAAYAIHEFFRERGFFHVHTPILTGSDCEGAGEMFRVTTLPV 187

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
           S  + T +          D   K   L  S +    + LA G  K++ F   +R      
Sbjct: 188 SGASGTPVPPSGNHFEA-DFFGKECNLTVSGQLEA-EALAMGLGKVYTFGPTFRAENSNT 245

Query: 112 -LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF M+E   A       + D M +          ++      +   F       +
Sbjct: 246 ARHAAEFWMIEPEFAFAD----LNDDMELAEAMTRTVVTRVLERCAADIELFDRFVDNGL 301

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            E     A                       +  G +  +  ++           +    
Sbjct: 302 IERLRTIAGQPFARVSY-------REAIELLKACGKKFDYPVSFGLDLQTEHERYLAEEH 354

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE- 289
                 I+  YP    A       D       ++    I       EL+   ++  R + 
Sbjct: 355 -FGKPVIVYNYPKSIKAFYMRLNDDNETVAAMDVLVPRI------GELIGGSQREERLDV 407

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E + ++   N        +L          +G  +GF+RL+ML+TG  NI +V+  P +
Sbjct: 408 LEARIREIGQNPGDY--WWYLDLRRFGSVPHAGFGLGFERLLMLLTGIANIRDVVPFPRT 465


>gi|170717449|ref|YP_001784547.1| asparaginyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189083273|sp|B0UTU8|SYN_HAES2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|168825578|gb|ACA30949.1| asparaginyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 467

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 109/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRTDKGAVDFSQDFFGKESFLTVSGQLNGESYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++           + +  +   F +     V   
Sbjct: 245 LAEFWMVEPEIAFATLADNAKLAEDMLKYVFRAV----LNEREDDLKFFEKHVDKNVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G       +W    S      +      +
Sbjct: 301 LKDFINSDFA-------QIDYTDAIDILLKSGKAFEFPVSWGIDLSSEHERYLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++  +    D  +   L        +G  +GF+RL++ VTG  NI +VI  P +
Sbjct: 407 RIAEMGLKAE--DYWWYRDLRRYGTVPHAGFGLGFERLIVYVTGVQNIRDVIPFPRT 461


>gi|315051948|ref|XP_003175348.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340663|gb|EFQ99865.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 947

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 119/331 (35%), Gaps = 27/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I +  R       FIEI +  LQ +   E+    F       ++  +P +
Sbjct: 277 SQSIFRIQSAISTMFRSALDAQNFIEIHTPKLQ-AAATESGASVFGV-----NYFGRPAF 330

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 331 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEALEV 390

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +  +      + +  +          E +   E     +  D    L++    D   
Sbjct: 391 LDGVLKSIFKTIYEKYRLEIEVIKHHFPSEDLVWLEETPIISFADGVKMLNDSGWVD--- 447

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                 + G +++  + +       L E ++     +   ILD++PA         +P D
Sbjct: 448 ------ENGNKLSETEDFGTRDEIRLGELVKEKYHTD-YYILDKFPAVARPFYAMPHPDD 500

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            R T  F+++    E+ +    + DP     R       ++     +    E+++     
Sbjct: 501 ERLTLSFDIFVRGQEIVSGGQRIHDPDLLEKR------MREVGIEPSTM--EEYMEGFKW 552

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +RL+ML+    NI      
Sbjct: 553 GAPPHAGAGIGLERLLMLILKLGNIRLGSLF 583


>gi|317051283|ref|YP_004112399.1| asparaginyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946367|gb|ADU65843.1| asparaginyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 448

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 105/351 (29%), Gaps = 35/351 (9%)

Query: 10  WNRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE 65
                  R   F      R+ +  ++  YF +  F  + +  +  +           +T 
Sbjct: 115 GLPHLRPRSNTFNAVFRLRSSLSHAIHRYFADLGFHWVQTPIITANDCEGAGEQFRVTTL 174

Query: 66  LIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTM 119
                H+ +  +     L  S +   +    A   +I+ F   +R+       H  EF M
Sbjct: 175 PAGDTHMEQDFFGRPASLTVSGQLEGEAFATA-LGRIYTFGPTFRSENSNTSRHLAEFWM 233

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR-YA 178
           +E   A    + +M    + ++           +          +     + +  A  +A
Sbjct: 234 VEPEVAFADLDDIMALAEDFVQSMVRHVCDTFAAELAFFEQHMEKGLLQKLQQTTAGSFA 293

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            I     ++   +  R   +  A              D+ S       E +        +
Sbjct: 294 RITYTQAIEILLEAPRSFTFPVA-----------WGVDLQSEHERYLCEEH--FQKPVFV 340

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKK 297
             YP    A       D    +  +L    I E+        D    + R E+       
Sbjct: 341 TDYPKQIKAFYMKLNDDGTTVRAMDLLLPGIGEIIGGSQREDDIHVLQQRMEE-----IG 395

Query: 298 IYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  E+    + +L          +G  +G +RL+  VTG +NI +VI  P 
Sbjct: 396 LDMESM---DWYLELRRYGNQPHAGFGLGLERLLQYVTGVHNIRDVIPFPR 443


>gi|238005676|gb|ACR33873.1| unknown [Zea mays]
          Length = 109

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 1/109 (0%)

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            S LA  + + P  T+RFEL+    E+CNA  EL DP+ QR RFE+++++++   +E   
Sbjct: 1   MSPLAKWHRSRPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFEEQLKDRQSGDDEAMA 60

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           +DE F A L   +P + G  +G DRL ML+T + NI EV+  P  +  +
Sbjct: 61  LDETFCAALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAMKPQE 109


>gi|153811292|ref|ZP_01963960.1| hypothetical protein RUMOBE_01684 [Ruminococcus obeum ATCC 29174]
 gi|149832790|gb|EDM87874.1| hypothetical protein RUMOBE_01684 [Ruminococcus obeum ATCC 29174]
          Length = 463

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 101/357 (28%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE--------- 56
            H R R          R++   ++ ++F E  F+ + +  +  S      E         
Sbjct: 122 THLRPRTNTFQAVFRVRSLCAYAIHKFFQERGFVYVHTPLITGSDCEGAGEMFQVTTLDM 181

Query: 57  --THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
               +    T    QD   K   L  S + + +    A    I+ F   +R        H
Sbjct: 182 KNPPLNEDGTVDYSQDFFGKETNLTVSGQLNGETYAQA-FRNIYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M    ++++                  N F+      + + 
Sbjct: 241 AAEFWMIEPECAFADLNDNMDLAEDMLKYVIRYV----LENAPEEMNFFNSFIDKGLLDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                + + G                  ++   +  +   W           +   +   
Sbjct: 297 LNHVVDSEFGHVTYTE-------AIELLEKNNDKFDYKVFWGCDLQTEHERYLTEEIFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +     I       +  D  ++      E+ 
Sbjct: 350 PV-FVTDYPKEIKAFYMKQNEDGKTVAAMDCLVPGIGEIIGGSQREDDYDKLKARMDELG 408

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K +        D  F   L      + SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 409 LKAE--------DYQFYMDLRKYGSTRHSGFGLGFERCVMYLTGMGNIRDVIPFPRT 457


>gi|225870243|ref|YP_002746190.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225699647|emb|CAW93326.1| asparaginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 448

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/349 (19%), Positives = 117/349 (33%), Gaps = 35/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+   +  RN I  +  E+F +N FI+ DS  L    GN       +
Sbjct: 125 MDHRHLWLRSR--RQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILS---GNAAEN---T 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P +L  S +   +  + A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGNPAFLSQSGQLYLEAGMMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                S+E+ +      ++   +                 +E     +AE F R +  D 
Sbjct: 236 EYPFLSHEESLDLQEAYVKAMIQGVLD-RAPQALELLERDTELLKRYIAEPFKRVSYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            + L      D                      D F       I    G+   T +  YP
Sbjct: 295 ISLLQEHSTDDDAD------------YEPIQHGDDFGSPHETWISNYFGV--PTFVINYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +       +L            E++    +   ++K + + K     
Sbjct: 341 ASFKAFYMKPVPGNEERVLCADL-----LAPEGYGEIIGGSVREDNYDKLLAKIKAEGL- 394

Query: 302 TYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             P D DF   L        +G  +G +R+V  V G  +I E I  P  
Sbjct: 395 -NPEDYDFYLDLRKYGSVPHAGFGLGLERMVTFVAGTKHIREAIPFPRM 442


>gi|298246266|ref|ZP_06970072.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297553747|gb|EFH87612.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 437

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/339 (17%), Positives = 105/339 (30%), Gaps = 37/339 (10%)

Query: 13  DFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDH 71
             H  RR  L   +++  + RE  +   F EI +   L  +     +       +   D+
Sbjct: 127 HRHPTRRAVLRLSSVLSQAFRESVLTRGFTEIHTPKILGTTTEGGAN-------VFKLDY 179

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYE 130
             +P YL  SP+   K+++    E++F     +R  E     H  E+  L+         
Sbjct: 180 FGRPAYLAQSPQLY-KQIMVGVFERVFEVGPVFRAEEHDSTRHLNEYVSLDVEMGFIENH 238

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
             +   +  I      A Q+  + +                              + +  
Sbjct: 239 FTIMALLRDILADIIGAFQEHCAPELELLKANLPVV----------------PAEIPHIH 282

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
             D   L L+  +  +R   D +  D   R L E      G +   +            +
Sbjct: 283 FQDAQELILKLHKVDVRGEPDLSPQD--ERWLGEWAMKEFGSDFLYVAGYPTKKRPFYTH 340

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             P  P +T  F+L    +EL      L    +     +            +    E +L
Sbjct: 341 TDPERPEYTNSFDLLFRGLELVTGGQRLHRYADYLEALQSRNM--------SMEPFEHYL 392

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G A+G +RL+M + GA N+      P  
Sbjct: 393 EAFRYGMPPHGGFAIGSERLLMQLLGAPNVRLTTTFPRD 431


>gi|291563445|emb|CBL42261.1| aspartyl-tRNA synthetase, archaeal type [butyrate-producing
           bacterium SS3/4]
          Length = 443

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 107/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  I    RE+     F EI +  +   S     ++           + 
Sbjct: 135 RNVRERAKFRIQEGICRGFREFMTSQGFTEIHTPKIGAKSAEGGANL-------FKLQYF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P  L  SP+F  +  +    +++F     +R  +     H  E+T L++         
Sbjct: 188 HRPAVLAQSPQFYKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGFIDSFM 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +      +        +K ++ +                        I+L      P  
Sbjct: 247 DICKMETAMLQYVVELLKKDYAKEVA-------------------LLKIELPNVEKIPFV 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  L A++   ++            ++ E  +   G +    +  YP+ +     +
Sbjct: 288 RFDEAKRLIAEKYDRQIRSPHDLEPEEEALIGEYFKSEYGAD-FVFVTHYPSKKRPFYAM 346

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +  FT  F+L    +E+      + D      +  +     K +  E     ED+L
Sbjct: 347 DDPENKEFTLSFDLLFRGLEITTGGQRIHDYETLLKKIAE-----KGMDIEGM---EDYL 398

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            C    MP   G+ +G +RL M + G +N+ E    P  
Sbjct: 399 DCFKYGMPPHGGLGIGLERLTMKMIGEDNVREACLFPRD 437


>gi|325578443|ref|ZP_08148578.1| asparagine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160179|gb|EGC72308.1| asparagine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 467

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRGEDGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLKFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|46445980|ref|YP_007345.1| asparaginyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|59798542|sp|Q6MEC9|SYN_PARUW RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46399621|emb|CAF23070.1| probable asparagine-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 467

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 99/355 (27%), Gaps = 41/355 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          RN +  +  ++F +  F+ I +  +  S       +        
Sbjct: 126 AHLRPRTNTIGAVTRVRNALAFATHQFFQKRGFLYIHTPIITGSDCEGAGKMFQVTTLDQ 185

Query: 60  -RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T     D+      KP YL  S + + +    A    ++ F   +R        H
Sbjct: 186 NNPARTPEGRVDYTQDFFGKPTYLTVSGQLNGEIYACA-LSDVYTFGPTFRAENSNTSRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M    + ++   +              N     + I+  E 
Sbjct: 245 LAEFWMIEPEMAFADLNDNMDCAEDYLKYILKYVLDNCQE-DMEFFNKHVATDLISRLEH 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                         + ++          ++A  +  +   W           +       
Sbjct: 304 ----------VINTSFERASYTYAVRILEKADKKFEYPVKWGLDLQSEHERFLAEEF-FG 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              IL  YP    A       D +     ++    +       E++   ++  R      
Sbjct: 353 KPVILTDYPKDIKAFYMRTNEDNKTVAAMDVLVPKV------GEIIGGSQREERLSVLES 406

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + K+           +L          SG   GF+RLV   TG  NI +VI  P 
Sbjct: 407 KLKEFNLPAEEY-WWYLELRKFGSVPHSGFGAGFERLVQFTTGMENIRDVIPFPR 460


>gi|323703770|ref|ZP_08115409.1| asparaginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531294|gb|EGB21194.1| asparaginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 430

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/350 (19%), Positives = 114/350 (32%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+   L  R  I+ + R++F +N F  +DS  +  +    T      
Sbjct: 115 MDRRHLWIRT--PRQNAILRIRAEIEQAARDFFHQNDFTLVDSPIITPAACEGT------ 166

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T L   D+  +  YL  S +   +    A   +++CF   +R  +     H  EF M+E 
Sbjct: 167 TTLFELDYHGEKAYLSQSGQLYNEASAMAV-GRMYCFGPTFRAEKSKTRRHLMEFWMIEA 225

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E  MK    ++    +   ++                          +   D+
Sbjct: 226 EAAFFDHEDNMKLQEELVYFIIQRVLERRRKD--------------------LEFLGRDI 265

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L+    P   L Y +A +       +  W D F       I  +   N    + RYP
Sbjct: 266 SK-LEAIKLPFPRLSYTEAVELLKSKGEEFQWGDDFGAPHETIISES--FNAPVFVHRYP 322

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNAC--DELLDPIEQRHRFEKEMQEKKKIY 299
           A   +      P DPR     +L A             + D      R E+    K+   
Sbjct: 323 AEIKAFYMQPDPEDPRVVLGADLIAPEGYGEIIGGGQRIHDFKLLEQRIEEHKLPKEAF- 381

Query: 300 NETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  E +L          SG  +G +R V  +   +++ E I  P  
Sbjct: 382 -------EWYLDLRRYGSVPHSGFGLGLERTVAWICKLDHVRETIPYPRM 424


>gi|229581477|ref|YP_002839876.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012193|gb|ACP47954.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 429

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 106/337 (31%), Gaps = 45/337 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  L  +++   S RE   +  F+E+ +   +  +      +           +  K  +
Sbjct: 131 QAVLKIQSVAVKSFRETLYKYGFVEVFTPKIIASATEGGAQLFPVL-------YFGKEAF 183

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   K+LLA   E++F  A AWR  E     H  EF  ++   A   Y  +M   
Sbjct: 184 LAQSPQLY-KELLAGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEMAFADYNDIMALI 242

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             II        ++                     E   +  N           +     
Sbjct: 243 EQIIYNMINDVRREC--------------------ENELKILNYTPPDVKIPMKKISYSE 282

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPAD 255
                +  G+ +   D            ++  +        +  +P             +
Sbjct: 283 AIEILKSKGVNIKFGDDVGT-----PELRVLYSELKEDLYFVTDWPWLSRPFYTKQKKDN 337

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P+ ++ F+L    +E+ +                 E   K +  N      E FL     
Sbjct: 338 PQLSESFDLIFRWLEIVSGSSRNHVKEVL------ENSLKVRGLNPESF--EFFLKWFDY 389

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            MP  +G  MG  R+++++TG  ++ EV+  P  +  
Sbjct: 390 GMPPHAGFGMGLARVMLMLTGLQSVKEVVPFPRDKKR 426


>gi|220905534|ref|YP_002480846.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869833|gb|ACL50168.1| asparaginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 454

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/352 (16%), Positives = 112/352 (31%), Gaps = 41/352 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+    ++ ++F   +F  + +  L  +       +   +T   
Sbjct: 121 AHLRPRTNKYGAVFRIRSEAGFAVHDFFRSRRFAWVHTPVLTGADCEGAGEMFRVTTLEP 180

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
              ++ +  +     L  S +   + L      +++ F   +R        H  EF M+E
Sbjct: 181 GAKNLDQDFFSRQCNLTVSGQLEAEALATG-LGRVYSFGPTFRAENSNTPRHAAEFWMIE 239

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E LM+    + R   +    +  S  N+  +   +     + +  A      
Sbjct: 240 PEMAFADLEDLMELGEGLTRHVVDHVLTRCESDVNLFDSFVDKGLRQRLQDMLAAPFG-- 297

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                    +          Q++G   A    +           +          I+  Y
Sbjct: 298 ---------RVSYTEAVEILQKSGKDFAFPVAFGTDLQTEHERYLAEEHFKKPV-IVYDY 347

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF-EKEMQEKKKIYN 300
           P    A       D +     ++    I       EL+   ++  R    E + ++  +N
Sbjct: 348 PKDIKAFYMRQNEDGKTVAAMDMLVPRI------GELIGGSQREERLPTLEARIREMGHN 401

Query: 301 ETYPIDEDFLACLT----EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 ED+   L          +G  +GF+RL+ML+TG  NI +VI  P +
Sbjct: 402 P-----EDYWWYLELRRFGTVPHAGFGLGFERLLMLLTGITNIRDVIPFPRT 448


>gi|118383039|ref|XP_001024675.1| aspartyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89306442|gb|EAS04430.1| aspartyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 604

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/336 (15%), Positives = 104/336 (30%), Gaps = 37/336 (11%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKP 75
           ++     ++ I    REY +   F+EI +  L    S G           +    +  K 
Sbjct: 295 KQAIFRLQSGICQLFREYLLSQDFVEIHTPKLIGGSSEGGA--------NIFKLKYFDKD 346

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMK 134
             L  SP+   +  + +  E++F     +R  +     H  EFT L+   + +     + 
Sbjct: 347 ACLAQSPQLYKQMCIQSDFERVFEIGPVFRAEKSFTHRHMCEFTGLDIEMSIKENYHELL 406

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
           D M  +        +  +S +                         +         +   
Sbjct: 407 DLMGDLFVHIFKGLETKYSKEIEAIQQQFPF---------------EPFKIKTPVVKLTF 451

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YP 253
                  ++AGI     +    +  + L + +      +   +L RYP        +   
Sbjct: 452 EEGCKLLKEAGIEQNPLEDLDTVTEKKLGDIVREKYDTD-FYMLHRYPISARPFYTMLCH 510

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
            DP +T  ++ +    E+ +      DP+    R  +       I  ET    +D++  +
Sbjct: 511 DDPNYTLSYDFFMRGQEITSGAQRNHDPVSLAKRAAE-----CGINVETI---KDYIESM 562

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   G  +G +R+V L     +I      P  
Sbjct: 563 AFGAYPHGGCGIGLERVVFLYCDLYDIRNGCLFPRD 598


>gi|46578424|ref|YP_009232.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|59798549|sp|Q72G53|SYN_DESVH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46447835|gb|AAS94491.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232356|gb|ADP85210.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 461

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/355 (16%), Positives = 104/355 (29%), Gaps = 40/355 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------- 58
            H R R          R+    ++ E++ E  F  + +  L  S      E         
Sbjct: 121 AHLRARTNKYGAAFRIRSEAAFAIHEFYRERGFFYVHTPILTGSDCEGAGEMFRVTTLPV 180

Query: 59  ---IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                  S      D   K   L  S +   + L      K++ F   +R        H 
Sbjct: 181 EGSATPASGNRYENDFFGKECNLTVSGQLEAETLALG-LGKVYTFGPTFRAENSNTPRHA 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E+ M    ++ R                + + F+     T+ E  
Sbjct: 240 AEFWMIEPEVAFADLEEDMNLAEDMTRTVVRRI----LDRCAADLDLFNRFVDTTLVERL 295

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            + A+                       ++G +  +  ++           +        
Sbjct: 296 RQIADEPFARCSYTE-------AIELLLKSGKKFEYPVSFGLDLQTEHERYLAEEH-FGK 347

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YP    A       D R     ++    I       EL+   ++  R +     
Sbjct: 348 PVIVYNYPKEIKAFYMRLNDDGRTVAAMDVLVPRI------GELIGGSQREERLDVLEAR 401

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ++          +L          +G  MGF+RL+ML+TG  NI +VI  P +
Sbjct: 402 INEMGQNLEDY-WWYLDLRRFGSVPHAGFGMGFERLLMLLTGITNIRDVIPFPRT 455


>gi|150026281|ref|YP_001297107.1| asparaginyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|149772822|emb|CAL44306.1| Asparagine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 478

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 125/373 (33%), Gaps = 39/373 (10%)

Query: 5   PSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE-- 56
           PS  +   + H R R       +  R+++  ++  YF E  F+ +++  +  S       
Sbjct: 110 PSLDFLRENAHLRVRTNMFGAIMRVRSVLSYAVHSYFQEKGFVYVNTPIITGSDAEGAGE 169

Query: 57  ---THIRAF----STELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                   F     TE    ++      K   L  S +    +  A    +I+ F   +R
Sbjct: 170 MFKVTALPFDNTPRTEDGNVNYKEDFFGKETNLTVSGQL-EGETFAMALGQIYTFGPTFR 228

Query: 106 NGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                   H  EF M+E   A       M    + I+   +    K         +   +
Sbjct: 229 AENSNTSRHLAEFWMIEPEVAFNDLTDNMDLAEDFIQYVIKYTIDKCPDDLKFLESRLLD 288

Query: 165 PEYITVAEAFARYANID--------LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
            E        +  A ++            +   +  D        ++       ++  +D
Sbjct: 289 EEKSKPQAERSEMALLEKLNFVLENNFKRVSYTEAIDILRDCPPNKKKKFNYIINEWGAD 348

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           + S      +E +    C  IL  YPA   A       D +  +  ++    I       
Sbjct: 349 LQSEHERYLVEKH--FKCPVILFDYPANIKAFYMRLNEDGKTVRAMDILFPGI------G 400

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           E++   ++  RF+  +++ K +  +   +   +L          SG  +GF+RLV+ VTG
Sbjct: 401 EIVGGSQREERFDVLVEKMKALGIDEEEL-WWYLDTRRFGSAVHSGFGLGFERLVLFVTG 459

Query: 336 ANNINEVIWTPFS 348
             NI +VI  P +
Sbjct: 460 MTNIRDVIPFPRT 472


>gi|325183332|emb|CCA17790.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 505

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/377 (14%), Positives = 110/377 (29%), Gaps = 51/377 (13%)

Query: 3   QIPSQPWWNRD----FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +           H R R       +  R+ +  +  E+F  N F+ I +  +  S 
Sbjct: 141 PMSKKRHTLEHLRMHAHLRPRSNIHGATMRVRHAMAFATHEFFHTNGFLYIHTPIITTSD 200

Query: 53  --PGNETHIR---------------AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEE 95
                E                   +  T    +D   +  YL  S + + +    A   
Sbjct: 201 CEGAGEMFHVTTLLPKKANETIPRTSSGTVDYSKDFFDRAAYLSVSGQLNVETHCCA-LS 259

Query: 96  KIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
            ++ F   +R        H  EF M+E   A    +  +    + ++  A  A       
Sbjct: 260 DVYTFGPTFRAENSNTARHLAEFWMIEPEIAFADLKMNIDLAEDYLKYCARYA----LEH 315

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
              +   F +     + E        D              LL     +   + +    W
Sbjct: 316 CREDLEFFDQQVEKGLVERLENTVAKDFIRMTY---TDAIQLLSEPKHRKKGKFSVQPEW 372

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
                      +   +  +   ++  YP    +       D +     ++    +     
Sbjct: 373 GVDLGSEHERYLTETVYKHPV-VIYDYPKEIKSFYMRLNDDGKTVAAADVLVPRV----- 426

Query: 275 CDELLDPIEQRHRFE-KEMQEKKKI---YNETYPIDEDFLACLTEMPQSSGIAMGFDRLV 330
             E++   ++  R+E  E + +       +  + +D             SG  +GF+RL+
Sbjct: 427 -GEIIGGSQREERYEVLEQRIRDSGANVEDYQWYMDLR----RYGSVPHSGFGLGFERLI 481

Query: 331 MLVTGANNINEVIWTPF 347
             VTG  NI +VI  P 
Sbjct: 482 RFVTGIENIRDVIPFPR 498


>gi|149637054|ref|XP_001510544.1| PREDICTED: similar to Aspartyl-tRNA synthetase [Ornithorhynchus
           anatinus]
          Length = 329

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 111/334 (33%), Gaps = 31/334 (9%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I    RE      F+EI +  +  +  +E     F+             Y
Sbjct: 18  SQAVFRLQSGICHLFRETLTHKGFVEIQTPKIISAA-SEGGANVFTVSYFKSSA-----Y 71

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  + A  EK+FC    +R  +     H  EF  L+   A   +   + D 
Sbjct: 72  LAQSPQLYKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVDE 131

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           +           Q+ F  +    +     E     E   R                +   
Sbjct: 132 IADTLVQIFKGLQERFQTEIQTVSKQFPCEPFKFLEPTLR---------------LEYRE 176

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                + AG+ +  ++  S    ++L   ++     +   ILD+YP           P +
Sbjct: 177 ALALLRGAGVEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILDKYPLAVRPFYTMPDPGN 235

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
           P+ +  ++++    E+ +    + DP     R      +   I N    I + ++     
Sbjct: 236 PKQSNSYDMFMRGEEILSGAQRIHDPQLLTER-----AQHHGIGNYLEKI-KAYIDSFRF 289

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 290 GAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRD 323


>gi|160947517|ref|ZP_02094684.1| hypothetical protein PEPMIC_01451 [Parvimonas micra ATCC 33270]
 gi|158446651|gb|EDP23646.1| hypothetical protein PEPMIC_01451 [Parvimonas micra ATCC 33270]
          Length = 461

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 111/360 (30%), Gaps = 51/360 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+++  +L ++F E  F+   +  +  S       +  F    + 
Sbjct: 121 HLRPRANTFNAVFRVRSILSYALHKFFFERGFVYAHTPIITASDAEGAGEM--FRVTNLD 178

Query: 69  QDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            D++           +  +     L  S +    +  A     I+ F   +R        
Sbjct: 179 IDNLPRTNNGEVDFTQDFFSKPTNLTVSGQL-EGEAFAMAYRNIYTFGPTFRAENSNTTR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    + ++K   ++++   +                F++     + E
Sbjct: 238 HAAEFWMIEPEIAFADLKDVIKLSEDMVKYIIKFV----LENAPDEMKFFNDFIDNGLLE 293

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N +                    + +     +   W           I   +  
Sbjct: 294 RLNSVVNSEFKVMTYTE-------AIEILKSSKENFKYPVEWGVDLKTEHERYICEKIVK 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-E 291
                L  YP    A       D +     ++    I       EL+   ++  R E  E
Sbjct: 347 GPV-FLTDYPKEIKAFYMRLNDDNKTVAATDMLVPGI------GELIGGSQREERLEILE 399

Query: 292 MQEKKK---IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K     I + ++ +D   L       +  G  +GF+R++M +TG  NI +V+  P +
Sbjct: 400 QKMKDSNMNIDDYSWYLD---LRRFGGT-KHGGYGLGFERMLMYLTGMQNIRDVLPFPRT 455


>gi|321223326|gb|EFX48395.1| Asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
          Length = 445

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 105/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 104 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 163

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 164 ENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 222

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E   +    +++       ++    +  +   F+E         
Sbjct: 223 LAEFWMLEPEVAFADLEDNARLAEAMLKYVFNAVLEE----RADDMKFFAERVDKDAIAR 278

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G    +   W    S      +       
Sbjct: 279 LERFVSTDFAQV-------DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKA 331

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 332 PVVVK-NYPKEIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 384

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 385 RMAEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 439


>gi|223041478|ref|ZP_03611681.1| asparaginyl-tRNA synthetase [Actinobacillus minor 202]
 gi|223017736|gb|EEF16143.1| asparaginyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 467

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 63/357 (17%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRGEDGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++       ++    +  +   F +    TV   
Sbjct: 245 LAEFWMVEPEFAFATLADNAKLAEDMLKYVFRAVLEE----RKDDLKFFEKHVDNTVISR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G        W    S      +      +
Sbjct: 301 LENFINSDFA-------QIDYTDAIEVLLKSGKNFEFPVEWGIDLSSEHERYLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++     P D  +   L        SG  +GF+RL++ VTG  NI EVI  P +
Sbjct: 407 RMVEMGL--NPEDYWWYRDLRRYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPRT 461


>gi|212635434|ref|YP_002311959.1| asparaginyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212556918|gb|ACJ29372.1| Asparaginyl-tRNA synthetase, class IIb [Shewanella piezotolerans
           WP3]
          Length = 466

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 113/356 (31%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  +       RN +  ++  ++ E  +I + +  +  S       +   ST  +
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYNEQGYIWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRDDKGAVDYSEDFFGKESFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A+   +   K   ++++   +    +    +  +   F++    T  + 
Sbjct: 244 LAEFWMVEPEVAYADLDDAAKLAEDMLKYCFKAVLAE----RRDDLEFFAQRVEKTAIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + + D         Q D        +  G +  +D  W           +       
Sbjct: 300 LEAFVSSDFA-------QIDYTDAIEILKACGKKFEYDVEWGIDLHSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R   ++ 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGAQREERL--DVL 403

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + +    E    D  +   L        +G  +GF+RLV  VTG +NI +VI  P 
Sbjct: 404 DARLAEMELSQEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPR 459


>gi|59798580|sp|Q7UHE1|SYN_RHOBA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|32448516|emb|CAD78031.1| asparaginyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 490

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 106/357 (29%), Gaps = 47/357 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI--------- 59
           H R R       +  RN I  S+  +F +  F  + +  +  S       +         
Sbjct: 152 HLRARTNTLGAVMRVRNRISQSIHRFFDDEGFNYLHTPIITASDCEGAGEMFRVTTLNLE 211

Query: 60  ------RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                 R F T    QD  +KP +L  S +   +    A   +++ F   +R        
Sbjct: 212 KLAGSNRPFDT---KQDFFQKPTHLTVSGQLEAETYATA-LSRVYTFGPTFRAENSNTSR 267

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M+     ++           S    + + F+E       +
Sbjct: 268 HLAEFWMVEPEAAFYDLNDNMQLAERFLK----RVFSDCLSHCGEDMDFFNERIEKGKID 323

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                    +    ++    D     L   +   +  +   W           +     +
Sbjct: 324 QLKSV----IEKPFEHMTYTDAVERLLACDE---KFEYPVNWGTDLQAEHERYL--TSVV 374

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               IL  YP+           D +     ++    +       E++   ++  R +   
Sbjct: 375 GGPVILTDYPSSIKPFYMRVSDDGKTVAAMDVLVPGV------GEIIGGSQREERLDVLQ 428

Query: 293 QEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +   +       ++          +G  +G +R V  VTG  NI +VI  P +
Sbjct: 429 RRMAEGGLDESEY-WWYVDLRRYGTVPHAGFGLGLERAVQYVTGMANIRDVIPFPRT 484


>gi|291528414|emb|CBK94000.1| asparaginyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 463

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 100/358 (27%), Gaps = 47/358 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++   ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFEAVFRVRSLCAYAIHKFFQERDFVYVHTPLITGSDCEGAGEM--FQVTTLD 180

Query: 69  QDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +++              +     L  S +    +  A   + I+ F   +R        
Sbjct: 181 LNNLPMTEEGKVDFSKDFFNKPTNLTVSGQL-NGETYAMAFKNIYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M    ++++                    F+      + +
Sbjct: 240 HAAEFWMIEPEIAFADLEDDMMLAESMLKYVINYV----LENAPEEMAFFNNFVDKGLLD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                   D                     +   +  +  +W           +   +  
Sbjct: 296 RLRNVVENDFARVTYTE-------AIDILSKHNDKFDYKVSWGCDLQTEHERYLTEQIYK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        D  +   R    
Sbjct: 349 RPV-FVTDYPKEIKAFYMKLNDDGKTVAAVDCLVPGIGEIIGGSQREDDYDKLLARI--- 404

Query: 292 MQEKKKIYNETYPID-EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +      +  + +D   + +        +G  +GF+R VM +TG  NI +VI  P +
Sbjct: 405 NELGLSEDDYKFYLDLRKYGSAR-----HAGFGLGFERCVMYLTGMGNIRDVIPFPRT 457


>gi|227551929|ref|ZP_03981978.1| asparagine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257886906|ref|ZP_05666559.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257895477|ref|ZP_05675130.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257898093|ref|ZP_05677746.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|293378343|ref|ZP_06624512.1| asparagine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227178930|gb|EEI59902.1| asparagine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257822960|gb|EEV49892.1| asparaginyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257832042|gb|EEV58463.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257836005|gb|EEV61079.1| asparaginyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|292643207|gb|EFF61348.1| asparagine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 432

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 110/349 (31%), Gaps = 41/349 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F ++ F++ID   L   +P         
Sbjct: 115 MDHRHLWLRSS--RQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTDLFETNYFDQKAYLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      +   E        D
Sbjct: 225 PEMAFTHQEESLEVQEQYVAFLVQNV--------------------LDHCEYALDVLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTILDR 240
                     P   + Y  A +   +   DD  W + F       I           +  
Sbjct: 265 KEVLKTYTKLPFPRITYDDAIELLKKNGFDDIEWGEDFGSPHETFIA--NSFEQPVFILN 322

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP             P  T+   +   ++       E++   E+   ++  +++ +    
Sbjct: 323 YPKAIKPFYM----KPHPTREDVVICADMIAPEGYGEIIGGSERATDYDFLLEQIRDHGL 378

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +       +L          SG  +G +R V  + G +++ E I  P  
Sbjct: 379 DEKEY-SWYLDLRKYGSVPHSGFGLGLERTVTWIAGIDHVREAIPFPRL 426


>gi|146302990|ref|YP_001190306.1| aspartyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|145701240|gb|ABP94382.1| aspartyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 429

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/342 (18%), Positives = 108/342 (31%), Gaps = 45/342 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                +  +  ++    + RE   ++ F EI +   +         +           + 
Sbjct: 126 RRQEMQAMIRIQSTAVRTFRETLYKHGFYEIFTPKIIATGTEGGAQLFPVI-------YF 178

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            K  +L  SP+   K+LLA   E++F  A AWR  E     H  EF  ++   A   Y  
Sbjct: 179 GKEAFLAQSPQLY-KELLAGAVERVFEVAPAWRAEESDTPYHLAEFISMDVEMAFADYND 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +MK   ++I    E       + QN           IT       Y              
Sbjct: 238 VMKIVEDVIANVLENV---ARNHQNDLAILNHRLPSITRPIKRVTY-------------- 280

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                     Q  G+     D            ++   +       +  +PA        
Sbjct: 281 ---EEAIEILQSQGLPTKFGDDIGT-----PESRVLNKVLEQDLYFITDWPAEARPFYTK 332

Query: 252 YPAD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
              D P+ ++ F+L    +EL +           R   E+E   + +  N      E FL
Sbjct: 333 RREDNPKISESFDLVYRWLELVSGSSRNHT----REVLERE--LRARGLNPINF--EFFL 384

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                 +P  +G  MG  R ++++TG  ++ EV   P  +  
Sbjct: 385 KWFDYGIPPHAGFGMGLQRFMLMLTGLQSVKEVSLFPRDKKR 426


>gi|294635625|ref|ZP_06714101.1| asparagine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091008|gb|EFE23569.1| asparagine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 466

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 109/359 (30%), Gaps = 47/359 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  L       R+ +  ++  YF EN +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRYFHENGYFWVSTPLITASDTEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   +  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRDAAGKVDYNEDFFGREAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    + +      +++   +   ++    +  +   F++       
Sbjct: 242 RHLAEFWMVEPEVAFADLDAIAGVAEGMLKYVFKAVLEE----RADDMAFFAQRVDKDAV 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E   R+   D           D        +  G +  +   W    S      +     
Sbjct: 298 ERLQRFITSDFAQV-------DYTDAITILESCGKQFENPVFWGVDLSSEHERYLAEQHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDML 403

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +   ++  +    D  +   L        SG  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DKRLDEMGLKKE--DYWWYRDLRRYGTVPHSGFGLGFERLVAYVTGVQNVRDVIPFPRT 460


>gi|145630812|ref|ZP_01786590.1| asparaginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983694|gb|EDJ91154.1| asparaginyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 467

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPEDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|116492342|ref|YP_804077.1| asparaginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|116102492|gb|ABJ67635.1| asparaginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 464

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 116/359 (32%), Gaps = 45/359 (12%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R+++  ++ ++   N F+ +++  +  S       +  F    
Sbjct: 122 QAHLRPRTNTFYAVFRIRSLVSFAVHQFLQSNNFVYVNTPIITSSDTEGAGEM--FKVTT 179

Query: 67  IIQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QG 110
           +  +++ K            +     L  S + + +    A    ++ F  A+R      
Sbjct: 180 LDLNNLPKNEAGEVDSSKDFFKQPTNLTVSGQLNAEAFALA-FRNVYTFGPAFRAENSHT 238

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF M+E   A  + + +M    ++++       +              E E++  
Sbjct: 239 TRHASEFWMIEPEMAFANLQDIMNTSEDLLKYVVNYLLENAKE----------ELEFLNG 288

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
           A      A ++     D         + +    A     +   W           +   +
Sbjct: 289 AVDPELKARLEATKDADFARVSYTEAIDILMN-ADQEFENPVEWGIDLQTEHERYLSEKV 347

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +  YP    A       D +     +L    I       EL+   ++  R +K
Sbjct: 348 YQKPV-FITDYPKDIKAFYMRENEDHKTVAAVDLLVPGI------GELIGGSQREERLDK 400

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ++  + + +     E +         + SG  +GF+RL+M VTG  NI +VI  P +
Sbjct: 401 INEKIAEFHLDPKEY-EWYAELRKYGETEHSGFGIGFERLLMYVTGIENIRDVIPFPRT 458


>gi|145634910|ref|ZP_01790617.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|229845116|ref|ZP_04465251.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|145267776|gb|EDK07773.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|229811952|gb|EEP47646.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 467

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 111/356 (31%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + E   K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLEDNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|309389246|gb|ADO77126.1| asparaginyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 463

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 104/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-FL----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          R+ +  ++  YF E  F  I +  +          +        
Sbjct: 122 AHLRARTNTFGVVNRFRSKMSYAIHNYFYEEDFKYIHTPIITSGDAEGAGEVFKVSTLDL 181

Query: 60  -RAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                TE    D+  +  +     L  S +   + L  A    ++ F   +R        
Sbjct: 182 DNPPKTEAGKIDY-SQDFFGEETGLTVSGQLEAELLATA-LGDVYTFGPTFRAENSNTSR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A  + +++M    + I+     A  +         + F++       E
Sbjct: 240 HASEFWMIEPEMAFCNLDEMMTLMEDFIKNLFNFALNEAEE----EMDFFNQWIDEGRRE 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                   D G                  + +        +W           +      
Sbjct: 296 MIEEIIQSDFGRITYTE-------AIDILENSDHDFEFPVSWGIDLQSEHERYLTEKHFE 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               +   YP    A       D +     +     + E+           + ++R E+ 
Sbjct: 349 KPIMV-YNYPKEIKAFYMRQNDDEKTVAAVDCLVPGVGEIVGGSQREERYDKLKNRMEEL 407

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +  E Y   E FL          SG  +GF+RL+M ++G  NI +VI  P +
Sbjct: 408 -----DMDLEKY---EWFLDIRKYGSVPHSGFGLGFERLLMYLSGMQNIRDVISFPRT 457


>gi|66828391|ref|XP_647550.1| asparagine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|74859257|sp|Q55FI3|SYNM_DICDI RecName: Full=Proabable asparaginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS;
           Flags: Precursor
 gi|60475568|gb|EAL73503.1| asparagine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 460

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 100/348 (28%), Gaps = 36/348 (10%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFSTE 65
            H R R       L  RN     + +YF +N FI + +  +  S    G E      S +
Sbjct: 128 AHIRSRGNSIGALLRVRNKSTQLIHQYFNDNGFINVHTPIITASDCEGGGEQFQIKSSLD 187

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
                   +P +L  S +   +    +   +++ F   +R  +     H  EF M+E   
Sbjct: 188 TKESMFFGQPSFLTVSGQLEAEIYACSHS-RVYTFGPTFRAEKSNTPRHLSEFWMIEPEM 246

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A       +    +  +                            +     R     L  
Sbjct: 247 AFIDLNDNLDIAEDFCKYLIRNLLDSCKE---------------DIEFFNKRIDTNLLSR 291

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                  P   L Y  A Q      H   W D   R   + I  + G      +  +P  
Sbjct: 292 LEKTLSTPFIRLEYKDAIQLLQNNNHPIKWGDDIQREQEKFITTHFGEIPV-FVINWPKS 350

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                         +      +    L     EL+    +  R++K +            
Sbjct: 351 IKPFYMRENEQTDHSNIMPTVSNMDLLVPTVGELIGGSIREERYDKLLNTIN-----EMG 405

Query: 305 IDED----FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +D+D    +L           G  +GF+R +  VTG  NI +VI  P 
Sbjct: 406 MDKDQYSWYLDLRKYGTVPHGGFGLGFERFLQFVTGLQNIKDVIPIPR 453


>gi|332306229|ref|YP_004434080.1| asparaginyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173558|gb|AEE22812.1| asparaginyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 465

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/371 (16%), Positives = 110/371 (29%), Gaps = 46/371 (12%)

Query: 3   QIPSQP---WWNRDFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
             P +    +     H R R  +       RN +  ++  +F EN +  + +  L  S  
Sbjct: 110 MAPKRHSLEYLREHAHLRPRTNVIGAVTRVRNCLSQAIHRFFHENGYCWVSTPILTASDT 169

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 QD   K  +L  S + + +    A   KI+ F
Sbjct: 170 EGAGEMFRVSTLDMMNVPATEQGQVDFSQDFFGKETFLTVSGQLNGETYATAMS-KIYTF 228

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A      + +   ++++   +    +         
Sbjct: 229 GPTFRAENSNTSRHLAEFWMIEPEVAFADLSDIAQLSEDLLKYVFKAVLAERADDMAFFA 288

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
              ++ E I+  E               +  + D        Q  G +     +W    S
Sbjct: 289 QRINK-EAISRLEKVIE----------QDFVRMDYTDAIEILQNCGKKFEFPVSWGVDLS 337

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +          +   YP    A       D +             L     E++
Sbjct: 338 SEHERYLAEEHVGAPIIMQ-NYPKDIKAFYMRINDDNKTVAAM------DVLAPGIGEII 390

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +   +   ++       D  +   L        SG  +GF+RLV  VTG  
Sbjct: 391 GGSQREERLDVFDRRLAEMGL--NQEDYSWYRDLRRYGTVPHSGFGLGFERLVAYVTGMQ 448

Query: 338 NINEVIWTPFS 348
           N+ +VI  P +
Sbjct: 449 NVRDVIAFPRT 459


>gi|320584022|gb|EFW98234.1| aspartyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 557

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/355 (14%), Positives = 111/355 (31%), Gaps = 51/355 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               ++ I    +E+ +E  F+E  +  L  +  +E     F
Sbjct: 229 DTRLDSRVIDLRTVTNQAIFRLQSGICQLFKEFLLERNFVETHTPKLI-AAASEGGANVF 287

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                  D+ +   +L  SP+F  ++L+AA  E++F  A  +R        H  EF  L+
Sbjct: 288 KV-----DYFKGSAFLAQSPQFYKQQLIAADFERVFEIAPVFRAENSNTHRHMTEFVGLD 342

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A E     + D ++ +        +  ++ +          E               
Sbjct: 343 LEMAIEEDYHEVVDLLSELFVFIFSELKTRYAKEIATVRRQFPVEEF------------- 389

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                    +          + AG  +   D  S    ++L + +      +   +LD++
Sbjct: 390 KLPKDGKMVKLHYKEGIQMLRDAGRELGDYDDLSTENEKLLGKLVREKYDTD-FYVLDKF 448

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           P D  ++  ++ +    E+ +    + DP+    R +           
Sbjct: 449 PLAVRPFYTMPDPEDSNYSNSYDFFMRGEEILSGAQRIHDPVLLAERIK----------- 497

Query: 301 ETYPID------EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + +D       D++          +G  +G +R++M      NI      P  
Sbjct: 498 -AHDVDTTTPGLSDYIQAFTYGCAPHAGGGIGLERVLMFFLDLKNIRRASLFPRD 551


>gi|294140784|ref|YP_003556762.1| asparaginyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293327253|dbj|BAJ01984.1| asparaginyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 466

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 109/357 (30%), Gaps = 45/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRA---- 61
            H R R  +       RN +  ++  ++ E  FI + +  +  S      E    +    
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFQVSTLDM 184

Query: 62  ---FSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T+    D+      K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDEGKVDYSEDFFGKEAFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + +      +++   +   ++    +  +   F++    TV E 
Sbjct: 244 LAEFWMVEPEVAFADLDDVAALAEQMLKFCFKAVLEE----RRDDLEFFAQRVDKTVIER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              +   D           D        +  G +  +   W           +       
Sbjct: 300 LESFVTSDFAQV-------DYTEAVEILKNCGKKFEYAVEWGIDLQSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R E+  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGAQREERLDVLDARLEEMN 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             K+         D  +   +        +G  +GF+RLV  VTG +NI +VI  P 
Sbjct: 412 LSKE---------DYWWYRDMRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPR 459


>gi|291525477|emb|CBK91064.1| asparaginyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 463

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 100/358 (27%), Gaps = 47/358 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++   ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFEAVFRVRSLCAYAIHKFFQERDFVYVHTPLITGSDCEGAGEM--FQVTTLD 180

Query: 69  QDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +++              +     L  S +    +  A   + I+ F   +R        
Sbjct: 181 LNNLPMTEDGKVDFSKDFFNKPTNLTVSGQL-NGETYAMAFKNIYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M    ++++                    F+      + +
Sbjct: 240 HAAEFWMIEPEIAFADLEDDMMLAESMLKYVISYV----LENAPEEMAFFNNFVDKGLLD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                   D                     +   +  +  +W           +   +  
Sbjct: 296 RLRNVVENDFARVTYTE-------AIDILSKHNDKFDYKVSWGCDLQTEHERYLTEQIYK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        D  +   R    
Sbjct: 349 RPV-FVTDYPKEIKAFYMKLNDDGKTVAAVDCLVPGIGEIIGGSQREDDYDKLLARI--- 404

Query: 292 MQEKKKIYNETYPID-EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +      +  + +D   + +        +G  +GF+R VM +TG  NI +VI  P +
Sbjct: 405 NELGLSEDDYKFYLDLRKYGSAR-----HAGFGLGFERCVMYLTGMGNIRDVIPFPRT 457


>gi|323489716|ref|ZP_08094943.1| asparaginyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396847|gb|EGA89666.1| asparaginyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 431

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 110/353 (31%), Gaps = 50/353 (14%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    ++   +  RN I  S  E+F +N F+++D   L   SP   + +  F
Sbjct: 115 MDNRHLWLRSR--KQHAIMKIRNEIIRSTYEFFNDNGFVKVDPPILTGSSPEGTSEL--F 170

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+     +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 171 ATK-----YFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   + + ++     +    +   +                      +      + D
Sbjct: 225 PEMAFIEHVESLEVQEQYVSYIVQSVLKNC--------------------KLELERLDRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +           R       +        D  W + F       +  +   +    +  Y
Sbjct: 265 VSKLEKIKAPFPRVSYDDAIKWLNDNGFDDIKWGEDFGAPHETALAESY--DMPIFITHY 322

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P          +P         +     +       E++       R       K++I  
Sbjct: 323 PIGIKPFYMQPHPERDDVVLCAD-----MIAPEGYGEIIGGS---ERIHDYELMKQRIQE 374

Query: 301 ETYPIDED----FLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + +DED    +L          SG  +G +R V  ++G  +I E I  P  
Sbjct: 375 --HNLDEDAYAWYLDLSKYGSVPHSGFGLGLERTVAWISGVEHIRESIPFPRL 425


>gi|308049454|ref|YP_003913020.1| asparaginyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307631644|gb|ADN75946.1| asparaginyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 466

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 103/358 (28%), Gaps = 47/358 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       +  RN +  ++  ++ E  FI + +  L  S       +  F    +
Sbjct: 125 AHLRPRTNITGAVMRVRNCLSQAIHRFYHEQGFIWVSTPILTASDCEGAGEM--FRVSTL 182

Query: 68  IQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +                  K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMNNLPRLENGEVDYDQDFFGKETFLTVSGQLNAETYACAMS-KVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E   K    +++        +            ++ E IT  
Sbjct: 242 RHLAEFWMVEPEVAFADLEDNAKLAEAMLKYCFRAVLDERMDDLQFFEQRVNK-EVITRL 300

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           ++F             +  Q D        +  G        W    +      +     
Sbjct: 301 KSFVEA----------DFAQVDYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 403

Query: 292 MQEKKKIYN--ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            Q  +++    E      D           +G  +GF+RLV  VTG  NI +VI  P 
Sbjct: 404 DQRMEEMGLPKEEMYWYRDLRR--YGTIPHAGFGLGFERLVSYVTGVTNIRDVIPFPR 459


>gi|238754326|ref|ZP_04615682.1| Asparaginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238707359|gb|EEP99720.1| Asparaginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 466

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 111/358 (31%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDAGKIDFSEDFFGKEAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  S + +      +++   +    +    +  +   F++       + 
Sbjct: 244 LAEFWMIEPEVAFASLDDVAALAEKMLKYVFQAVLDE----RADDLAFFAQRVDKDAIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D          +G    +D +W    S      +       
Sbjct: 300 LQRFVTSDFAQV-------DYTDAIDILIASGQTFENDVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDQ 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|288936272|ref|YP_003440331.1| asparaginyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290510672|ref|ZP_06550042.1| asparaginyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|288890981|gb|ADC59299.1| asparaginyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289777388|gb|EFD85386.1| asparaginyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 466

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 109/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E       + 
Sbjct: 244 LAEFWMLEPEVAFANLNDVAGLAEAMLKYVFKAVLEE----RADDMQFFAERVDKDAIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LQRFITADFAQV-------DYTDAVTILENCGKQFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|161614759|ref|YP_001588724.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|161364123|gb|ABX67891.1| hypothetical protein SPAB_02511 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 445

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 106/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 104 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 163

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 164 ENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 222

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E   +    +++   +   ++    +  +   F+E         
Sbjct: 223 LAEFWMLEPEVAFADLEDNARLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAIAR 278

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G    +   W    S      +       
Sbjct: 279 LERFVSTDFAQV-------DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKA 331

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 332 PVVVK-NYPKEIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 384

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 385 RMAEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 439


>gi|251792588|ref|YP_003007314.1| asparaginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247533981|gb|ACS97227.1| asparaginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 467

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/356 (16%), Positives = 108/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRTDKGTVDFSEDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F++     V   
Sbjct: 245 LAEFWMIEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RRDDLEFFAKHVDNDVINR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ N D           D         ++G       +W    S      +      +
Sbjct: 301 LERFINSDFAQV-------DYTDAIEILLKSGKTFEFPVSWGIDLSSEHERYLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R     +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLNMLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMAEMGL--NPEDYWWYRDLRRYGTVPHSGFGLGFERLIVYVTGLQNIRDVIPFPR 460


>gi|323339824|ref|ZP_08080093.1| asparagine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323092697|gb|EFZ35300.1| asparagine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 433

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 113/353 (32%), Gaps = 48/353 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN +  +  E+F +  FI++D+  L   +P         
Sbjct: 115 MDHRHLWLRSK--RQFAVMKIRNEVIRATYEFFNKEGFIKLDAPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++  K  YL  S +   ++  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTELFHTEYFDKDAYLSQSGQLY-EEAGAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     I    +                      +   +        D
Sbjct: 225 PEMAFMHQEESLEIQERYIAYLVQNV--------------------LDHCDYELGILGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVA--HDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                   + P   + Y +A           D  W + F       +  +   +    + 
Sbjct: 265 RDVLKRYTELPYPRISYDEAIDLLKESGEFPDVKWGEDFGSPEETYLAEH--FSKPVFVM 322

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR---HRFEKE-MQEK 295
            YP             P  T+   +   ++       E++   E+       E++ ++  
Sbjct: 323 NYPKAIKPFYM----KPHPTRDDVVICADLLAPEGYGEIIGGSERSTDPEYLEEQIVKAG 378

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +  + +D             SG  +G +R +  +TG ++I E I  P  
Sbjct: 379 LNKDDYEWYLDLR----RYGSVPHSGFGLGLERCITWLTGEDHIREAIPFPRL 427


>gi|238923388|ref|YP_002936904.1| asparaginyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238875063|gb|ACR74770.1| asparaginyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 463

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 100/358 (27%), Gaps = 47/358 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++   ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFEAVFRVRSLCAYAIHKFFQERDFVYVHTPLITGSDCEGAGEM--FQVTTLD 180

Query: 69  QDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +++              +     L  S +    +  A   + I+ F   +R        
Sbjct: 181 LNNLPMTEEGKVDFSKDFFNKPTNLTVSGQL-NGETYAMAFKNIYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M    ++++                    F+      + +
Sbjct: 240 HAAEFWMIEPEIAFADLEDDMMLAESMLKYVISYV----LENAPEEMAFFNNFVDKGLLD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                   D                     +   +  +  +W           +   +  
Sbjct: 296 RLRNVVENDFARVTYTE-------AIDILSKHNDKFDYKVSWGCDLQTEHERYLTEQIYK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        D  +   R    
Sbjct: 349 RPV-FVTDYPKEIKAFYMKLNDDGKTVAAVDCLVPGIGEIIGGSQREDDYDKLLARI--- 404

Query: 292 MQEKKKIYNETYPID-EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +      +  + +D   + +        +G  +GF+R VM +TG  NI +VI  P +
Sbjct: 405 NELGLSEDDYKFYLDLRKYGSAR-----HAGFGLGFERCVMYLTGMGNIRDVIPFPRT 457


>gi|313677686|ref|YP_004055682.1| asparaginyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312944384|gb|ADR23574.1| asparaginyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 507

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 122/377 (32%), Gaps = 44/377 (11%)

Query: 5   PSQP---WWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---P 53
           P +    +     H R R          R+ +  ++ ++F E  F  + +  +  +    
Sbjct: 136 PKKHSMEFMREKAHLRMRSSTFSAVFRIRHSLAFAIHQFFHEKGFYNLHTPIITANDAEG 195

Query: 54  GNET-HIRAFSTELII----------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
             ET H+  F  + I           QD   K   L  S +    +L A    +I+ F  
Sbjct: 196 AGETFHVTNFDLDKIPMTDEGKVDYKQDFFGKETNLTVSGQL-EGELSAMALGEIYTFGP 254

Query: 103 AWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF------- 154
            +R        H  EF M+E   A       M     +++   + A +            
Sbjct: 255 TFRAENSNTTRHLAEFWMVEPEMAFYDLNDNMNLAEEMLKYVVKYALENCKEDLDFLAKR 314

Query: 155 --QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
                   P +E + + + E        D    +   D  +        ++       + 
Sbjct: 315 ADDEDKQKPQNERQELGLLERLQFILENDF-EKVSYTDAIEILRNSKPNKKKKFNYIIEG 373

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
             +D+ S      +E +       IL  YP    A       D +     ++    I   
Sbjct: 374 WGADLQSEHERFLVEKH--FKKPVILFDYPKDIKAFYMRQNDDDKTVGAMDILFPGI--- 428

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
               E++   ++  R +K  Q  K++      +   +L          SG  +GF+RL++
Sbjct: 429 ---GEIVGGSQREERLDKLTQRMKEMDIPEDEL-WWYLDTRKFGTAPHSGFGLGFERLML 484

Query: 332 LVTGANNINEVIWTPFS 348
            VTG  NI +VI  P +
Sbjct: 485 FVTGMGNIRDVIPFPRT 501


>gi|242239076|ref|YP_002987257.1| asparaginyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131133|gb|ACS85435.1| asparaginyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 466

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/360 (16%), Positives = 115/360 (31%), Gaps = 49/360 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F +N F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFHQNGFYWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRTENGKVDFGEDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  S + +     N+++   +   ++    +  +   F+E       E 
Sbjct: 244 LAEFWMIEPEVAFASLDDIAALAENMLKFVFKAVLEE----RADDMAFFAERVDKEAVER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        Q +G    +  +W    S      +       
Sbjct: 300 LERFIHSDFAQV-------DYTDAITILQNSGQSFENPVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A      +D +             L     E++   ++  R  +++ 
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNSDGKTVAAM------DVLAPGIGEIIGGSQREERL-QQLD 404

Query: 294 EKKKIYNETYPI---DEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +     E   +   D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 405 AR----LEEMGLNKEDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|56963824|ref|YP_175555.1| asparaginyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|59798484|sp|Q5WGB1|SYN_BACSK RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|56910067|dbj|BAD64594.1| asparaginyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 430

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 109/350 (31%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  R+ I  S  ++F E  F ++DS  L   SP   + +  F
Sbjct: 114 MDHRHLWLRSK--RQHAIMKIRSQIIRSTYDFFSERGFTKLDSPILTGSSPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  YL  S +   +    A   ++F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDEDAYLSQSGQLYAEAGAMA-LGRVFTFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E+ ++     +   A+                      +   +   +    D
Sbjct: 224 PEMAFVEHEESLEIQEQYVAHLAKAV--------------------LDHCQLELKQLGRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +           R            +   D +W D F       I  +   +    + RY
Sbjct: 264 VTKLEAIKAPFPRITYDEALDLLKEKGFDDISWGDDFGSPHETAIAEH--FDKPVFITRY 321

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            D        +   ++       E++       R       K+++   
Sbjct: 322 PRSLKPFYMQPAPDRDDV----VLCADLIAPEGYGEIIGGS---ERIHDYDLLKQELEKH 374

Query: 302 TYPIDE--DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             P+D    +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 375 NLPLDAYGWYLDLRKYGSVPHSGFGLGLERTVAWLSGTEHVRETIPFPRL 424


>gi|294619950|ref|ZP_06699323.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291593807|gb|EFF25308.1| asparaginyl-tRNA synthetase [Enterococcus faecium E1679]
          Length = 432

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 110/349 (31%), Gaps = 41/349 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F ++ F++ID   L   +P         
Sbjct: 115 MDHRHLWLRSS--RQHAIMQIRNEIIRATYEFFNQHHFVKIDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTDLFETNYFDQKAYLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      +   E        D
Sbjct: 225 PEMAFTHQEESLEVQEQYVAFLVQNI--------------------LDHCEYALDVLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTILDR 240
                     P   + Y  A +   +   DD  W + F       I           +  
Sbjct: 265 KEVLKTYTKLPFPRITYDDAIELLKKNGFDDIEWGEDFGSPHETFIA--NSFEQPVFILN 322

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP             P  T+   +   ++       E++   E+   ++  +++ +    
Sbjct: 323 YPKAIKPFYM----KPHPTREDVVICADMIAPEGYGEIIGGSERATDYDFLLEQIRNHGL 378

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +       +L          SG  +G +R V  + G +++ E I  P  
Sbjct: 379 DEKEY-SWYLDLRKYGSVPHSGFGLGLERTVTWIAGIDHVREAIPFPRL 426


>gi|113970465|ref|YP_734258.1| asparaginyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123324982|sp|Q0HIB6|SYN_SHESM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|113885149|gb|ABI39201.1| asparaginyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 466

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 109/358 (30%), Gaps = 47/358 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  +       RN +  ++  ++ EN F+ + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEM--FRVSTL 182

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                            D   K  +L  S + + +    A   KI+ F   +R       
Sbjct: 183 DMENLPRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A  +   +      +++ A      +    +  +   F++    TV 
Sbjct: 242 RHLAEFWMVEPEVAFATLSDIANLAEGMLKYAFNAVLAE----RMDDLQFFAQHVDKTVI 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E    + + D           D        Q+ G       +W    S      +     
Sbjct: 298 ERLQSFVSSDFAQV-------DYTDAVEILQKCGREFEFPVSWGIDLSSEHERYLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 403

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               +++       D  +   L        +G  +GF+RLV  VTG +NI +VI  P 
Sbjct: 404 DMRLEEMDL--NKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPR 459


>gi|229579863|ref|YP_002838262.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|228010578|gb|ACP46340.1| aspartyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
          Length = 429

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 106/337 (31%), Gaps = 45/337 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  L  +++   S RE   +  F+E+ +   +  +      +           +  K  +
Sbjct: 131 QAVLKIQSVAVKSFRETLYKYGFVEVFTPKIIASATEGGAQLFPVL-------YFGKEAF 183

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   K+LLA   E++F  A AWR  E     H  EF  ++   A   Y  +M   
Sbjct: 184 LAQSPQLY-KELLAGAIERVFEIAPAWRAEESDTPYHLSEFISMDVEMAFADYNDIMALI 242

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             II        ++                     E   +  N           +     
Sbjct: 243 EQIIYNMINDVRREC--------------------ENELKNLNYTPPDVKIPMKKISYSE 282

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPAD 255
                +  G+ +   D            ++  +        +  +P             +
Sbjct: 283 AIEILKSKGVNIKFGDDIGT-----PELRVLYSELKEDLYFVTDWPWLSRPFYTKQKKDN 337

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P+ ++ F+L    +E+ +                 E   K +  N      E FL     
Sbjct: 338 PQLSESFDLIFRWLEIVSGSSRNHVKEVL------ENSLKVRGLNPESF--EFFLKWFDY 389

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            MP  +G  MG  R+++++TG  ++ EV+  P  +  
Sbjct: 390 GMPPHAGFGMGLARVMLMLTGLQSVKEVVPFPRDKKR 426


>gi|322823627|gb|EFZ29340.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 564

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/360 (14%), Positives = 117/360 (32%), Gaps = 37/360 (10%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W              ++ +    R++ +++ F+EI S  +  +  +E     F       
Sbjct: 215 WLDLRTPASNAIFKVQSRVGQYFRQFLMDHDFVEIHSPKII-AAASEGGANVFKV----- 268

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHES 128
            +  +  YL  SP+   +  L    +++F     +R        H  EF  L+       
Sbjct: 269 GYFNRDAYLAQSPQLYKQMALQGDLKRVFEVGPVFRAENSNTHRHLTEFVGLDVEMRINE 328

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +   + D    + C       K  + +          E +       +   + +G   D+
Sbjct: 329 HYYEVLDTAEELFCYMFAQLAKH-TGELEAICRQYPFEPLLWQLTPEKIKELGVGVIEDS 387

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIF------------------SRILIEKIEPNL 230
            +  D +   ++     +   H      +                    ++L + ++   
Sbjct: 388 VEPTDIYKARVRNMGTRMLRIHYPHCIALLNTVLEEKLSLTDDINTTNEKLLGKLVKERY 447

Query: 231 GINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
           G++   I D +P          +P D RFT  ++++    E+ +    + D      R  
Sbjct: 448 GVD-FFISDLFPTAARPFYTMPFPDDERFTNSYDMFIRGEEISSGAQRIHDSSLLLKR-- 504

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +    + + PI +D++           G  +G +R+VML  G +N+  V   P  
Sbjct: 505 ----ARSLGVDLS-PI-KDYVDSFRLGAWPHGGFGVGLERVVMLYLGLSNVRLVSLFPRD 558


>gi|284165949|ref|YP_003404228.1| aspartyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284015604|gb|ADB61555.1| aspartyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 434

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 123/363 (33%), Gaps = 52/363 (14%)

Query: 4   IPSQPWW----NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P  P      +       R               R+ + +++R+ F E    EI++  +
Sbjct: 102 LPLDPSGKVDADLSTRLDNRTLDLRKEDVQSVFEIRSGVLNAVRDQFREFDCTEINTPKI 161

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             + G E       TEL    +  +  ++  SP+   + +  +  E++F     +R  E 
Sbjct: 162 VAT-GTEGG-----TELFPITYFGEEAFMNQSPQLFKQLIAGSNVERVFEIGPIFRAEEH 215

Query: 110 -GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  E T +++  A   ++  M     I++ A E   +          N   E E I
Sbjct: 216 NTPRHLNEATSIDFEGAFCDHQDAMDVAEGIVKAAYEAVQE----------NFGDELEAI 265

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            +A+        +      +  +        +    G  +     W D  S    E +  
Sbjct: 266 GIAD--------EFAVPEGDFPRISYEGAIERINATG-ELDEQLVWGDDLSTPAEEALGQ 316

Query: 229 NLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           ++G      +  +P+         +  DP  +  F+L    +EL +         +    
Sbjct: 317 DVG--GHYFITDWPSEIKPFYIKDHDDDPELSTGFDLMHPRMELVSGGQREHRHEKLIEG 374

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE++        +      E +       MP  +G  +G +RL+M + G +NI E +  P
Sbjct: 375 FEQQ------GLDPDQF--EYYTKMFKYGMPPHAGFGLGGERLIMTLLGLDNIREAVLFP 426

Query: 347 FSQ 349
             +
Sbjct: 427 RDR 429


>gi|260825387|ref|XP_002607648.1| hypothetical protein BRAFLDRAFT_123951 [Branchiostoma floridae]
 gi|229292996|gb|EEN63658.1| hypothetical protein BRAFLDRAFT_123951 [Branchiostoma floridae]
          Length = 454

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/388 (15%), Positives = 122/388 (31%), Gaps = 65/388 (16%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSL-----------REYFVENQFIEIDSMSLQYSPG 54
           S+P  N+D     R  +  R     ++           R       F+EI +  +  +  
Sbjct: 81  SRPRVNQDTRLDNR-IIDLRTTTNQAVYRVVAGVCDLFRATLTGKGFVEIHTPKIISAA- 138

Query: 55  NETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
           +E     F+      +      YL  SP+   +  +AA  EK+F     +R  +     H
Sbjct: 139 SEGGANVFTVSYFKNNA-----YLAQSPQLYKQMAIAADFEKVFTVGAVFRAEDSNTHRH 193

Query: 114 QPEFTMLEWYRAHESYEQ--------LMKDCMNIIRCAAEVANQKI-------------- 151
             EF  L+   A   +          +       +R       ++               
Sbjct: 194 LTEFVGLDLEMAFNYHYHEVLDVIGDMFVCIFKGLRDRVSGTGKEFVDLDLEMAFNYHYH 253

Query: 152 -----FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
                     V         Y T      +    +    L+   + +        ++AG+
Sbjct: 254 EVLDVIGDMFVCIFKGLRDRYKTEINTIQKQFPSEPFRFLEPSLRLEFPEAVAMLREAGV 313

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFELY 265
            +  +D  S    ++L + ++     +   ILD++P           P +P++   +++Y
Sbjct: 314 EIGDEDDLSTPDEKLLGKLVKAKYDTD-FFILDKFPLAVRPFYTMPDPNNPKYANSYDMY 372

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFLACL-TEMPQSS 320
               E+ +    + DP     R +             + ID    + ++       P   
Sbjct: 373 MRGEEILSGAQRIHDPEFLTERAK------------AHEIDIEKIKSYIDSFRYGCPPHG 420

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFS 348
           G  +G +R+VML  G NNI +    P  
Sbjct: 421 GGGIGMERVVMLYLGLNNIRKTSMFPRD 448


>gi|291384180|ref|XP_002708714.1| PREDICTED: asparaginyl-tRNA synthetase 2, mitochondrial
           [Oryctolagus cuniculus]
          Length = 477

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 101/349 (28%), Gaps = 38/349 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R       L  R+   +++  +F +  F+ I +  +  +       +  F  E   
Sbjct: 144 HLRCRTNVLGSILRVRSEATAAIHSFFKDRGFVHIHTPVITSNDCEGAGEL--FQVEASS 201

Query: 69  Q------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +      +    P +L  S +    ++++    ++F F   +R        H  EF M+E
Sbjct: 202 KIKAPEGNFFDVPTFLTVSGQLHL-EVMSGAFAQVFTFGPTFRAENSQSRRHLAEFYMVE 260

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +     Q +   M  +  +  +            C+ F  P      E   +     
Sbjct: 261 AEISFIENLQDLTQIMEDLFKSTAMMVLSNCPEDVELCHKFLAPGKKDRLEHMLK----- 315

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                +N             ++A         W         + +  + G      +  Y
Sbjct: 316 -----NNFLIISYTEAVEILKKASQNFTFTPEWGADLQTEHEKYLVEHCGNIPV-FIINY 369

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR--FEKEMQEKKKIY 299
           P            D        +      L     EL     +  R  F ++   +    
Sbjct: 370 PLALKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGSLREERYHFLEQQLAR-SGL 424

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            E Y     +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 425 TEAYQ---WYLELRRFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 470


>gi|225571192|ref|ZP_03780190.1| hypothetical protein CLOHYLEM_07280 [Clostridium hylemonae DSM
           15053]
 gi|225160023|gb|EEG72642.1| hypothetical protein CLOHYLEM_07280 [Clostridium hylemonae DSM
           15053]
          Length = 478

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 105/359 (29%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   +L ++F E  F+ + +  +  S       +  F    +
Sbjct: 137 AHLRPRTNTFQAVFRVRSLTAYALHKFFQERGFVYVHTPIITGSDCEGAGEM--FRVTTL 194

Query: 68  ---------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
                           QD   K   L  S + + +    A    I+ F   +R       
Sbjct: 195 DMQSIPKDDSGKVDYSQDFFGKETSLTVSGQLNGETYAQA-FRNIYTFGPTFRAENSNTT 253

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M     +++                  N F+      + 
Sbjct: 254 RHAAEFWMIEPEMAFADLDDDMMLAEAMLKYVISYV----LEQAPEEINFFNSFVDKGLL 309

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      + +                    ++   +  +  +W           +   + 
Sbjct: 310 ERLNNVVSSEFARVTYTE-------AVEILEKNNDKFEYKVSWGTDLQTEHERYLTEEIY 362

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                 +  YP    A       D +     +     I E+        D  +   R ++
Sbjct: 363 KRPV-FVTDYPKEIKAFYMKQNDDGKTVAAVDCLVPGIGEIIGGSQREDDYDKLLARMKE 421

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            M  K++ Y       E +L        + SG  +GF+R +M +TG  NI +V+  P +
Sbjct: 422 -MDLKEEDY-------EFYLDLRKYGSTRHSGFGLGFERCIMYLTGMGNIRDVVPFPRT 472


>gi|302698377|ref|XP_003038867.1| hypothetical protein SCHCODRAFT_73634 [Schizophyllum commune H4-8]
 gi|300112564|gb|EFJ03965.1| hypothetical protein SCHCODRAFT_73634 [Schizophyllum commune H4-8]
          Length = 944

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 109/353 (30%), Gaps = 34/353 (9%)

Query: 6   SQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           S            R             +    R Y  ++ FIEI S  LQ S   E+   
Sbjct: 132 SDHTRLEHRVIDLRTPPSNALFRLNAAVCRYFRNYLDDHGFIEIHSPKLQGSA-TESGSS 190

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F  E     +  +  +L  SP+ + +  ++A   ++F     +R        H  E+T 
Sbjct: 191 VFPVE-----YFGRKAFLAQSPQLAKQMAISADMGRVFEIGPVFRAENSNTHRHLTEYTG 245

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +       M  +         +    Q          + +   E       
Sbjct: 246 LDIEMAFQHHYHETMYLMIDLLKNIFKNVYEHNRPQIEVLKQAFPHDDLVWTE------- 298

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI--FSRILIEKIEPNLGINCCTI 237
                T   P +    +L     +  + V       D+     I + ++          +
Sbjct: 299 ----ETPVIPFKEGIRMLKESGWEGDVSVIFPTEDDDLGTRDEIRLGELVKEKYHTDFYV 354

Query: 238 LDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           LD++P        +  P D RFT  F+++    E+      + +P     R       + 
Sbjct: 355 LDKFPVAARPFYAMLDPKDKRFTNSFDMFIRGQEIMTGGQRIHEPAALLRR------MRD 408

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   + E+++       P  +G  +G +R++ML+    NI      P  
Sbjct: 409 AGVVPAGSL-EEYMKAFEWGCPPHAGAGVGLERILMLMFKLGNIRFASMFPRD 460


>gi|225571840|ref|ZP_03780710.1| hypothetical protein CLOHYLEM_07814 [Clostridium hylemonae DSM
           15053]
 gi|225159504|gb|EEG72123.1| hypothetical protein CLOHYLEM_07814 [Clostridium hylemonae DSM
           15053]
          Length = 227

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 17/163 (10%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       D  YR+R              +KR+ I S++R Y     F+E+++ 
Sbjct: 68  LQILPEKFHGLTNTDTRYRQRYVDLIMNPEVRDTFIKRSHIISAIRRYLDGQGFLEVETP 127

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L  + G     R F T     + + +   L+ S E   K+L+  G EK++     +RN 
Sbjct: 128 MLVSNAGGAA-ARPFETHF---NALSEDFKLRISLELYLKRLIVGGLEKVYEIGRVFRNE 183

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK 150
                H PEFT++E Y+A+  Y  +M    N+ R  A+     
Sbjct: 184 GLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGT 226


>gi|91793313|ref|YP_562964.1| asparaginyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123166104|sp|Q12MT5|SYN_SHEDO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|91715315|gb|ABE55241.1| asparaginyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 466

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 112/356 (31%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRA---- 61
            H R R  +       RN +  ++  ++ E  FI + +  +  S      E    +    
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYHEQGFIWVSTPLITASDCEGAGEMFRVSTLDM 184

Query: 62  ---FSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                T+    D+      K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDAGKVDYDKDFFGKESFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTTRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + +   K   ++++ A         + +  + + F+E    TV E 
Sbjct: 244 LAEFWMVEPEVAFATLDDAAKLAEDMLKYAFNAV----LNERMDDLSFFNERVDKTVIER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + + D           D        +  G +      W           +       
Sbjct: 300 LQAFVSSDFAQV-------DYTDAVEILKNCGKKFEFAVEWGIDLQSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R   ++ 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGAQREERL--DVL 403

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + +    E    D  +   L        +G  +GF+RLV  VTG NNI +VI  P 
Sbjct: 404 DARLAEMELSQEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVNNIRDVIPFPR 459


>gi|6323011|ref|NP_013083.1| Dps1p [Saccharomyces cerevisiae S288c]
 gi|135100|sp|P04802|SYDC_YEAST RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3370|emb|CAA27269.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|3411|emb|CAA29865.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|1297012|emb|CAA66172.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1360191|emb|CAA97464.1| DPS1 [Saccharomyces cerevisiae]
 gi|151941152|gb|EDN59530.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|190406028|gb|EDV09295.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|207343237|gb|EDZ70762.1| YLL018Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272328|gb|EEU07312.1| Dps1p [Saccharomyces cerevisiae JAY291]
 gi|259147973|emb|CAY81222.1| Dps1p [Saccharomyces cerevisiae EC1118]
 gi|285813406|tpg|DAA09302.1| TPA: Dps1p [Saccharomyces cerevisiae S288c]
 gi|323303944|gb|EGA57724.1| Dps1p [Saccharomyces cerevisiae FostersB]
 gi|323332606|gb|EGA74013.1| Dps1p [Saccharomyces cerevisiae AWRI796]
 gi|323336545|gb|EGA77811.1| Dps1p [Saccharomyces cerevisiae Vin13]
 gi|323347600|gb|EGA81867.1| Dps1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 557

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 113/349 (32%), Gaps = 39/349 (11%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               +  +    REY    +F E+ +  L  +P +E     F
Sbjct: 229 DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAP-SEGGSSVF 287

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                   + +   YL  SP+F+ ++L+ A  E+++     +R        H  EFT L+
Sbjct: 288 EVT-----YFKGKAYLAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTEFTGLD 342

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A E +   + D ++ +         K F           E E +        +    
Sbjct: 343 MEMAFEEHYHEVLDTLSELFVFIFSELPKRF---------AHEIELVRKQYPVEEFKLPK 393

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
            G  +    +    +L    ++ G              +++ +K           ILD++
Sbjct: 394 DGKMVRLTYKEGIEMLRAAGKEIGDFEDLSTENEKFLGKLVRDKY-----DTDFYILDKF 448

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           PA+P+++  ++ +    E+ +    + D    + R       K    +
Sbjct: 449 PLEIRPFYTMPDPANPKYSNSYDFFMRGEEILSGAQRIHDHALLQER------MKAHGLS 502

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P  +D+        P  +G  +G +R+VM      NI      P  
Sbjct: 503 PEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRD 551


>gi|323308044|gb|EGA61297.1| Dps1p [Saccharomyces cerevisiae FostersO]
          Length = 557

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 113/349 (32%), Gaps = 39/349 (11%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               +  +    REY    +F E+ +  L  +P +E     F
Sbjct: 229 DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAP-SEGGSSVF 287

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                   + +   YL  SP+F+ ++L+ A  E+++     +R        H  EFT L+
Sbjct: 288 EVT-----YFKGKAYLAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTEFTGLD 342

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A E +   + D ++ +         K F           E E +        +    
Sbjct: 343 MEMAFEEHYHEVLDTLSELFVFIFSELPKRF---------AHEIELVRKQYPVEEFKLPK 393

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
            G  +    +    +L    ++ G              +++ +K           ILD++
Sbjct: 394 DGKMVRLTYKEGIEMLRAAGKEIGDFEDLSTENEKFLGKLVRDKY-----DTDFYILDKF 448

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           PA+P+++  ++ +    E+ +    + D    + R       K    +
Sbjct: 449 PLEIRPFYTMPDPANPKYSNSYDFFMRGEEILSGAQRIHDHALLQER------MKAHGLS 502

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P  +D+        P  +G  +G +R+VM      NI      P  
Sbjct: 503 PEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRD 551


>gi|313127269|ref|YP_004037539.1| aspartyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293634|gb|ADQ68094.1| aspartyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 434

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/367 (16%), Positives = 121/367 (32%), Gaps = 58/367 (15%)

Query: 3   QIPSQPWW----NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           Q+P  P              R               R  I  S+R+ F      EI++  
Sbjct: 101 QLPLDPSGKVDAELSTRLDNRTLDLRKDEVKAVFEIRAEILRSVRDAFRGLNATEINTPK 160

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +  + G E       TEL    +  +  ++  SP+   + ++ +G E++F     +R  E
Sbjct: 161 IVAT-GTEGG-----TELFPITYFGQEAFMNQSPQLFKQLMVGSGLERVFEVGPIFRAEE 214

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H  E T +++  A   + + M  C ++++ A E   +                  
Sbjct: 215 HNTPRHLNEATSIDFESAFFDHTEAMDACEHVVKAAYEGVAENC---------------- 258

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ---AGIRVAHDDTWSDIFSRILIE 224
                       + L    + P+     L Y +A +   A   +     W D        
Sbjct: 259 ------QRELETLGLAEEFEVPEGEFPRLTYEEAIERINATGELDEQLVWGDDLPTEGER 312

Query: 225 KIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIE 283
            +  ++G      +  +P+         +  D   +  F++    +EL +          
Sbjct: 313 ALGEDVGE--HYFITDWPSEIKPFYIKDHDDDETLSTGFDMMHPRMELVSGGQREH---- 366

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
              RFE  +   ++   +     E +       MP  +G  +G +RLVM + G +NI E 
Sbjct: 367 ---RFEHLVAGFEQQGLDPDQF-EYYTKMFKYGMPPHAGWGLGGERLVMTMLGLDNIREA 422

Query: 343 IWTPFSQ 349
           +  P  +
Sbjct: 423 VLFPRDR 429


>gi|50365297|ref|YP_053722.1| asparaginyl-tRNA synthetase [Mesoplasma florum L1]
 gi|59798528|sp|Q6F0Y5|SYN_MESFL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|50363853|gb|AAT75838.1| asparaginyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 454

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 107/345 (31%), Gaps = 27/345 (7%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST---E 65
           H R R          R+    ++ ++F EN ++ + +  +  +           +    +
Sbjct: 120 HLRARTKTFQAIFRIRSTAAFAIHKFFQENNYVYVTTPIITSNDAEGAGEQFVVTVNEDK 179

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYR 124
               D   K   L  S +    +  A   + I+ F   +R        H  EF M+E   
Sbjct: 180 DYANDFFGKKASLTVSGQL-NGEAFAQAFKNIYTFGPTFRAENSHTTKHASEFWMIEPEV 238

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A       ++   ++++       +K  +                      +   I    
Sbjct: 239 AFADINDNIQLMQDMLKSVVGYVLEKNMTELEFLQEQLEPG-------LIDKITGIVNVE 291

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
              N  +     L     +      ++  +           I   +   C T +  YP  
Sbjct: 292 FKVNTYEEVLKTLQDAIDKGHKFEENNIHFGLDLGTEHERFICEEVN-KCPTFVINYPKD 350

Query: 245 ESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
             +       D +     +L    I ELC   +   +  +   R E        I  E  
Sbjct: 351 IKSFYMKQNDDGKTVAAVDLLVPGIGELCGGSEREANLDKILERCE-----FYGINPE-- 403

Query: 304 PIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +D           +S+G  +GF+RL+M +TGA+NI +VI  P +
Sbjct: 404 ELDWYIGLRKYGFYKSAGFGLGFERLIMYITGASNIRDVIPFPRT 448


>gi|326791659|ref|YP_004309480.1| asparaginyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326542423|gb|ADZ84282.1| asparaginyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 463

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 108/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------- 58
            + R R          R++   ++ ++F E  F+   +  +  S      E         
Sbjct: 122 AYLRPRTNTFGAVFRVRSLAAYAIHKFFQERSFVYAHTPLITASDCEGAGEMFRVTTLDP 181

Query: 59  IRAFSTE----LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
           +    TE       +D   K   L  S + S +    A    ++ F   +R  +     H
Sbjct: 182 VHPPKTENGEVDFKEDFFGKMASLTVSGQLSAETFAMA-FRDVYTFGPTFRAEKSNTPRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M+   ++++                    F++     + E 
Sbjct: 241 AAEFWMIEPEIAFADLEDDMRLAEDMVKFVINYV----LENAKEEMAFFNQFVDKGILER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               A+ D G                  ++ G +  +   W           +       
Sbjct: 297 LQGVASADFGRVTYTE-------AVQILEKCGKKFEYPVYWGCDLQTEHERYLTEEHFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    I       EL+   ++  R E  ++
Sbjct: 350 PV-FVTNYPKEIKAFYMRMNEDGKTVAAMDLLVPGI------GELIGGSQREERLEVLLE 402

Query: 294 EKKKIYNETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++  +         L         +G  +GF+RL+M +TG  NI +VI  P +
Sbjct: 403 RMAELGLKEEDYWWYLDLRRFGGTR-HAGFGLGFERLIMYLTGMTNIRDVIPFPRT 457


>gi|85058993|ref|YP_454695.1| asparaginyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123738970|sp|Q2NU85|SYN_SODGM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|84779513|dbj|BAE74290.1| asparaginyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 466

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 104/356 (29%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R  L       R+ +  ++  +  E  F  + +  +  S       +        
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFMDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 60  -RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T     ++      K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRTPDGKVNYDEDFFGKEAFLTVSGQLNGESYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M E   A  + +        +++   +       + +  +   F+E         
Sbjct: 244 LAEFWMAEPEVAFATLDDAAGLAEAMLKYVFQAV----LTERADDMQFFAERIDKEAINR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ + D           D        Q  G    +  +W    S      +       
Sbjct: 300 LKQFISADFAQV-------DYTKAVEILQNCGQTFENPVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R ++  Q
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDRLDQ 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++       D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 406 RLAEMGL--NKDDYWWYRDLRRYGTVPHSGFGLGFERLIVYVTGMQNIRDVIPFPR 459


>gi|296811126|ref|XP_002845901.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238843289|gb|EEQ32951.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 946

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 123/331 (37%), Gaps = 27/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I +  R     + FIEI +  LQ S   E+    F       ++  +P +
Sbjct: 276 SQSIFRIQSAISNMFRSCLDTHNFIEIHTPKLQASA-TESGASVFGV-----NYFSRPAF 329

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 330 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEALEV 389

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +  +   +  + +  +          E +   +       ++    L++    D   
Sbjct: 390 LDHVLKSIFKSIYEKYRLEIEIIKHHYPSEDLVWLDKTPIIPFVEGVKMLNDSGWVD--- 446

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                 + G +++  + +       L E ++     +   ILDR+PA         +P D
Sbjct: 447 ------ENGNKLSETEDFGTRDEIRLGELVKAKYHTD-YYILDRFPASARPFYAMPHPDD 499

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            RFT  F+++    E+ +    + +P     R       ++   + +    E+++     
Sbjct: 500 DRFTLSFDIFVRGQEIVSGGQRIHNPELLEKR------MREVGIDPSSM--EEYMEGFKW 551

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +RL+ML+    NI      
Sbjct: 552 GAPPHAGAGIGLERLLMLILKLGNIRLGSLF 582


>gi|254566191|ref|XP_002490206.1| Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme [Pichia
           pastoris GS115]
 gi|238030002|emb|CAY67925.1| Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme [Pichia
           pastoris GS115]
 gi|328350604|emb|CCA37004.1| aspartyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 555

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 108/349 (30%), Gaps = 39/349 (11%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               ++ +    RE+  + +F E+ +  L  +P +E     F
Sbjct: 227 DTRLDARVIDLRTITNQAIFTIQSGVCLLFREFLTKKKFTEVHTPKLLGAP-SEGGSNVF 285

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                   + +   +L  SP+   ++L+AA  E++F  A  +R        H  EFT L+
Sbjct: 286 EVT-----YFKGKAFLAQSPQLYKQQLIAADFERVFEVAPVFRAENSNTHRHMTEFTGLD 340

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
                E +   + D ++ +        +  ++ +          E               
Sbjct: 341 LEMTFEEHYDEVIDLLSELFVFIFSELKTRYAKEIAIVRKQYPVEEF------------- 387

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                    +          ++ G  V   +  S    + L + +      +   ILD++
Sbjct: 388 KLPKDGKMVRIPFKEGIKLLRENGKEVDDFEDLSTENEKFLGKLVREKYDTD-FYILDKF 446

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P             DPR++  ++ +    E+ +    + D    + R            +
Sbjct: 447 PLAVRPFYTMPDHEDPRYSNSYDFFMRGEEILSGAQRIHDSEFLKER------MSVHGLD 500

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P  ED++           G  +G +R+VM      NI      P  
Sbjct: 501 SNSPGLEDYVQAFDYGCAPHGGGGIGLERVVMFYLDLKNIRRASLFPRD 549


>gi|225377738|ref|ZP_03754959.1| hypothetical protein ROSEINA2194_03389 [Roseburia inulinivorans DSM
           16841]
 gi|225210415|gb|EEG92769.1| hypothetical protein ROSEINA2194_03389 [Roseburia inulinivorans DSM
           16841]
          Length = 471

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 105/359 (29%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++   ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 131 HLRPRTNTFEAVFRVRSLCAYAIHKFFQERDFVYVHTPLITGSDCEGAGEM--FQVTTLD 188

Query: 69  QDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +++              +     L  S +    +  A   + I+ F   +R        
Sbjct: 189 MNNLPMTEDGKVDYSKDFFNKPTNLTVSGQL-NGETYAMAFKNIYTFGPTFRAENSNTTR 247

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M    ++++                    F+      + E
Sbjct: 248 HAAEFWMIEPEIAFADLEDDMILAESMLKYVINYV----LENAPEEMAFFNSFIDKGLLE 303

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                AN D                    ++   +  +  +W           +      
Sbjct: 304 RLQHVANSDFARVTYTE-------AVEILEKNNDKFDYKVSWGCDLQTEHERYLTEQ-VF 355

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        D  +   R  + 
Sbjct: 356 KRPVFVTDYPMEIKAFYMKLNPDGKTVAAVDCLVPGIGEIIGGSQREDDYEKLLARINE- 414

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  K++        D  F   L      + +G  +GF+R VM +TG +NI +VI  P +
Sbjct: 415 LGLKEE--------DYGFYLDLRKYGSARHAGFGLGFERCVMYLTGMSNIRDVIPFPRT 465


>gi|164686176|ref|ZP_02210206.1| hypothetical protein CLOBAR_02614 [Clostridium bartlettii DSM
           16795]
 gi|164601778|gb|EDQ95243.1| hypothetical protein CLOBAR_02614 [Clostridium bartlettii DSM
           16795]
          Length = 465

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 112/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          R++   ++ ++F +  F+   S  +  S       +        
Sbjct: 124 AHLRPRSNLFSAAFRVRSVAAYAIHKFFQDRNFVYAHSPIITGSDCEGAGEMFRLTTLDL 183

Query: 60  -RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                TE    D+      K   L  S +    +++A     ++ F   +R        H
Sbjct: 184 NDVPKTEDGKVDYSQDFFGKEANLTVSGQL-NAEIMALAFRNVYTFGPTFRAENSYTGRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M+   ++I+                    F+      + E 
Sbjct: 243 ASEFWMIEPEIAFADLEDNMELAEDMIKYIINYV----LENCPEEMEFFNSFVDKGLLER 298

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             +  N +                     ++G +  +   W           I   +  N
Sbjct: 299 LHKIVNSEFIRITYT-------KAIELLLESGQKFEYPVEWGCDLQTEHERYITEQI-FN 350

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +  +  +L    +       E++   ++  R++  M 
Sbjct: 351 APVFVTDYPKEIKAFYMRMNEDGKTVRAMDLLVPGV------GEIIGGSQREERYDLLMD 404

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L          SG  +GF+R++M +TG +NI +VI  P +
Sbjct: 405 RIKECGLNEEDY--WWYLELRKYGTATHSGFGLGFERIIMYLTGISNIRDVIPFPRT 459


>gi|302802616|ref|XP_002983062.1| hypothetical protein SELMODRAFT_117697 [Selaginella moellendorffii]
 gi|300149215|gb|EFJ15871.1| hypothetical protein SELMODRAFT_117697 [Selaginella moellendorffii]
          Length = 521

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 101/333 (30%), Gaps = 30/333 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ I S   ++   N+F +I +  L                  +Q    +P  L
Sbjct: 210 QAIFTVQSEISSLFHDFLRANKFRQIHTPKLIAGASEGGSAV-----FKLQYANDQPACL 264

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   +  +     ++F     +R  +     H  EF  L++    + +   + D +
Sbjct: 265 AQSPQLHKQMAICGDFRRVFEIGPVFRAEKSFTHRHLCEFIGLDFEMEIKEHYFEIIDLI 324

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
             +         K    +    N     E +                 LD          
Sbjct: 325 GKLFIYVFNELNKNCKKELETINSQYPFEPLQY---------------LDETLVLAFAEG 369

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
               ++AG              R L   ++     +   IL RYP             DP
Sbjct: 370 IQMLKEAGFETDPLGDLDTETERRLGLLVKERYKTD-FYILHRYPLAVRPFYTMPAVDDP 428

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
           +++  F+++    E+ +    + D      R E+   +   I        ++++      
Sbjct: 429 KYSNSFDVFIRGEEIISGAQRVHDKDLLLKRIEECNIDPNAIGL------QNYINSFSYG 482

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P   GI +G +R+ ML    +NI +    P  
Sbjct: 483 APPHGGIGVGLERVAMLFCNLDNIRKASLFPRD 515


>gi|323353881|gb|EGA85734.1| Dps1p [Saccharomyces cerevisiae VL3]
          Length = 557

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 113/349 (32%), Gaps = 39/349 (11%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               +  +    REY    +F E+ +  L  +P +E     F
Sbjct: 229 DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAP-SEGGSSVF 287

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                   + +   YL  SP+F+ ++L+ A  E+++     +R        H  EFT L+
Sbjct: 288 EVT-----YFKGKAYLAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTEFTGLD 342

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A E +   + D ++ +         K F           E E +        +    
Sbjct: 343 MEMAFEEHYHEVLDTLSELFVFIFSELPKRF---------AHEIELVRKQYPVEEFKLPK 393

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
            G  +    +    +L    ++ G              +++ +K           ILD++
Sbjct: 394 DGKMVRLTYKEGIEMLRAAGKEIGDFEDLSTENEKFLGKLVRDKY-----DTDFYILDKF 448

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           PA+P+++  ++ +    E+ +    + D    + R       K    +
Sbjct: 449 PLEIRPFYTMPDPANPKYSNSYDFFMRGEEILSGAQRIHDHALLQER------MKAHGLS 502

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P  +D+        P  +G  +G +R+VM      NI      P  
Sbjct: 503 PEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRD 551


>gi|270157788|ref|ZP_06186445.1| asparaginyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289163943|ref|YP_003454081.1| asparagine tRNA synthetase [Legionella longbeachae NSW150]
 gi|269989813|gb|EEZ96067.1| asparaginyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288857116|emb|CBJ10931.1| asparagine tRNA synthetase [Legionella longbeachae NSW150]
          Length = 467

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/355 (16%), Positives = 104/355 (29%), Gaps = 39/355 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R+ +  ++  +F E  F  I +  +  S       +   ST   
Sbjct: 126 AHLRPRTNTISAVTRIRHCLSQAIHRFFHEQGFFWIHTPIITSSDCEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 LNVPKGEQGQIDFSKDFFGRETFLTVSGQLNVEAYCLAMS-KVYTFGPTFRAENSNTSRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      L     +++R   +V  ++  +      N F  P  I   E 
Sbjct: 245 LAEFWMVEPEIAFAGLSDLCDLSQSMLRYLCKVVLEER-ADDMDFFNQFVAPGCIERVEH 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
            A            N +           +++        +W           +       
Sbjct: 304 IAE----------SNFEIMTYTDAIKILEKSEQSFDFPVSWGLDLQSEHERYLAEIHCKK 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              IL  YP            D +     ++ A  I       E  D ++   R  +E  
Sbjct: 354 PV-ILTNYPQEIKGFYMRLNDDEKTVAAMDVLAPGIGEIIGGSEREDRLDVLDRRIEESN 412

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  E+Y    D           +G  +G +R V  VTG  N+ +VI  P +
Sbjct: 413 L----NKESYQWYRDLRR--YGTVPHAGFGLGLERFVSYVTGLGNVRDVIPFPRT 461


>gi|293389907|ref|ZP_06634241.1| asparaginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290950441|gb|EFE00560.1| asparaginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 467

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRTDKGAVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F++     V   
Sbjct: 245 LAEFWMIEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RRDDLEFFAKHVDGDVINR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ N D           D         ++G       +W    S      +  +   +
Sbjct: 301 LERFINSDFAQV-------DYTDAIEILLKSGKTFEFPVSWGIDLSSEHERYLAEDYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMAEMGL--NPEDYWWYRDLRRYGTVPHSGFGLGFERLIVYVTGLQNIRDVIPFPR 460


>gi|228958486|ref|ZP_04120206.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228801113|gb|EEM48010.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 432

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDLELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 336 PNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASFKE-----KGLHPEKFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|227499836|ref|ZP_03929929.1| asparagine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227217945|gb|EEI83218.1| asparagine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 470

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 112/355 (31%), Gaps = 39/355 (10%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
                R    R     R+++  +L  +F +  F+ I+   +  S       +   +T   
Sbjct: 127 PHLRARTNTYRAVFRVRSILAYALHNFFQQRGFVYINPPIVTSSDAEGAGEMFNITTIDP 186

Query: 65  ----------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K  YL  S +   +    A    ++ F   +R  E     H
Sbjct: 187 NNPPRKEDGSVDFSKDFFSKKSYLTVSGQLEAEDYALA-FGDVYTFGPTFRAEESNTPRH 245

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A   Y   M    ++I+ A +                F++     + E 
Sbjct: 246 AAEFWMLEPEMAFTDYNLAMDVAEDMIKYAIDYL----LKNAPDEMEFFNKWIDEGLIER 301

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R  + +                    Q++G +  +   W           +   +   
Sbjct: 302 LKRVRDAEFKRLTYTE-------AIELLQKSGEKFEYPVEWGIDLQTEHERYLSEVIVKG 354

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +    F++    +       EL+   ++  R+++  +
Sbjct: 355 PV-FVTDYPKNIKAFYMKRNDDGKTVAAFDMLVPGV------GELIGGSQREERYDELYK 407

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             ++   +     +++L          SG  +GF+R VM VTG  NI +V+  P 
Sbjct: 408 SMEENGLKPEEY-QNYLDLRRFGTVVHSGFGLGFERAVMYVTGMKNIRDVLAYPR 461


>gi|229545213|ref|ZP_04433938.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229309758|gb|EEN75745.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1322]
          Length = 450

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 117/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L RN I  +  E+F E  FI+IDS  L   +P         
Sbjct: 129 MDHRHLWLRSS--KQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 179

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 180 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 238

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V+E F R    D
Sbjct: 239 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVSEPFKRITYDD 297

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 298 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 341

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 342 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 396

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 397 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 444


>gi|297715184|ref|XP_002833970.1| PREDICTED: lysyl-tRNA synthetase-like, partial [Pongo abelii]
          Length = 160

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 3/159 (1%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             T     +  R +L        +      T + +  +++ E +E        T +  +P
Sbjct: 4   PETNLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTC--INPTFICDHP 61

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
              S LA  + +    T+RFEL+    E+CNA  EL DP+ QR  FE++ + K    +E 
Sbjct: 62  QIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEA 121

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
             IDE+F   L   +P ++G  MG DR+ M +T +NNI 
Sbjct: 122 MFIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIK 160


>gi|197302035|ref|ZP_03167096.1| hypothetical protein RUMLAC_00763 [Ruminococcus lactaris ATCC
           29176]
 gi|197298844|gb|EDY33383.1| hypothetical protein RUMLAC_00763 [Ruminococcus lactaris ATCC
           29176]
          Length = 463

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 104/358 (29%), Gaps = 47/358 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL-- 66
           H R R          R++   ++ ++F E  F+ + +  +  S       +  F      
Sbjct: 123 HLRPRTNTFQAVFRVRSLAAYAIHKFFQERGFVYVHTPLITGSDCEGAGEM--FRVTTMD 180

Query: 67  -------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                          QD   K   L  S + + +    A    I+ F   +R        
Sbjct: 181 MENLPKNEDGTVDYTQDFFGKETSLTVSGQLNGETYAQA-FRSIYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M+    +++                  N F+      + +
Sbjct: 240 HAAEFWMIEPEIAFADLEDDMELAEAMLKYVINYV----LENAPEEMNFFNSFVDKGLLD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N D                    ++   +  +  +W           +   +  
Sbjct: 296 RLHNVVNSDFARVTYTE-------AIEILEKNNDKFDYKVSWGCDLQTEHERYLTEEIYK 348

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
                +  YP    A       D +     +     I       +  D  E+     +E+
Sbjct: 349 KPV-FVTDYPKEIKAFYMKLNGDGKTVAAVDCLVPGIGEIIGGSQREDDYEKLLARMQEL 407

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K++        D  F   L      + +G  +GF+R VM +TG +NI +VI  P +
Sbjct: 408 GLKEE--------DYGFYLDLRKYGSTRHAGFGLGFERCVMYLTGMSNIRDVIPFPRT 457


>gi|311280156|ref|YP_003942387.1| asparaginyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308749351|gb|ADO49103.1| asparaginyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 466

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 105/356 (29%), Gaps = 41/356 (11%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E   +    +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFADLEDNARLAEAMLKYVFKAVLEE----RPDDMKFFAERVDSEAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ N D           D        +  G    +   W    S      +       
Sbjct: 300 LERFINADFAQV-------DYTDAVTILENCGKTFENPVFWGVDLSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R  +  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLAEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+   +  +  D             +G  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LNKE---DYAWYRDLR----RYGTVPHAGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|312215312|emb|CBX95264.1| similar to aspartyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 1038

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 110/334 (32%), Gaps = 27/334 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I S  R+      FIEI +  LQ     E+    F       D+  +  +
Sbjct: 369 SQSIFRIQSGICSLFRQQLDSEGFIEIHTPKLQG-GATESGASVFKI-----DYFGRGAF 422

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  ++A   K++     +R        H  E+T L+     + +   +   
Sbjct: 423 LAQSPQLAKQMAISADFGKVYEIGAVFRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRV 482

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++           + +  +      +   E +   +        +    L+     D   
Sbjct: 483 LDRTFKNIFKGIYERYRPEVETIKRYFPHEDLVWLDETPVLPFAEAVRMLNASGWRDDE- 541

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPAD 255
                   G  +  ++         L   I+  LG +   ILD++P       A   P +
Sbjct: 542 --------GKELDENEDLGTRDEVQLGRVIKEKLGTD-YYILDKFPVNARPFYAMPDPNN 592

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
           P  T  F+++    E+ +    + D      +       K KI   +    E+++     
Sbjct: 593 PNVTNSFDIFCRGQEILSGGQRIHDADMLLEKM-----RKLKIDPSSM---EEYIQGFQW 644

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             P   G  +G +R++ML+    NI      P  
Sbjct: 645 GAPPHGGGGIGLERILMLMMSLGNIRHASMFPRD 678


>gi|228991204|ref|ZP_04151162.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM
           12442]
 gi|228768428|gb|EEM17033.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus pseudomycoides DSM
           12442]
          Length = 432

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R +     ++ +  +  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERIQAIFTIQSTLVQAFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQ 131
           K  YL  SP+F  + ++A G E +F  A  +R        H  E+  L+      E + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGFELVFEIAPVYRAEHHNSSRHLNEYISLDVEMGFIEDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    +++R   E   QK                     E       + +    + P  
Sbjct: 238 VMALEADVLRYMFEQVGQKC--------------------EKELVLLQVTVPIITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   +++ + ++   G +    +  YP     +   
Sbjct: 278 TLAEAQSILKTKYRKESPAGDLDTEG-EKLVGKYVKETYGSD-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K+K         E ++
Sbjct: 336 PNKENQAVTDSFDLLYKGLEITSGAQRIHEYRMLLASF------KEKGLQPENF--ESYI 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +RLV      +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERLVYKFLELSNVREASAFPRD 426


>gi|229087105|ref|ZP_04219255.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696173|gb|EEL49008.1| Asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 463

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 111/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 122 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 181

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 182 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +M    ++++ A +                F+     TV E 
Sbjct: 241 AAEFWMVEPEIAFAELGDVMNLTEDMLKYAMKYV----LEHAPEEMEFFNSFVDKTVLER 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D G                  Q++     +   W           +   +   
Sbjct: 297 MNNVINSDFGRITYTE-------AIKVLQESDADFKYPVEWGIDLQTEHERYLSEEI-FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I       EL+   ++  R +  + 
Sbjct: 349 RPVFVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGI------GELIGGSQREERMDVLVD 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K+   NE       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RIKELGMNEEDY--WWYLELRKYGGTKHAGFGLGFERFLMYITGMANIRDVIPFPRT 457


>gi|226287399|gb|EEH42912.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 968

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 109/331 (32%), Gaps = 28/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ + +          FIEI +  LQ S   E+    F        +  +  +
Sbjct: 299 SQSIFRIQSAVSNLFHSALDSQGFIEIHTPKLQGSA-TESGASVFEV-----SYFSRAAF 352

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A + +     + 
Sbjct: 353 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIDEHYHEALEV 412

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           +  +          E +   +        D    L++        
Sbjct: 413 IDSVLKEIFKGIYVRYRREVDIIKHQFPHEDLVWLDKTPVILFSDGIKLLNDSGW----- 467

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
                ++ G  +  ++         L E I+     +   ILD+YP        +  P +
Sbjct: 468 -----RRDGEELPTNEDLGTRDEMRLGELIKEKYHTD-YYILDKYPRVARPFYAMEDPEN 521

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
           P FT  F+++    E+ +    + D      R       +    +      ED+L     
Sbjct: 522 PEFTNSFDIFVRGQEIVSGGQRIHDEKILEKR------MRDAGIDPLTM--EDYLEGFRW 573

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +RLVML+    NI      
Sbjct: 574 GAPPHAGAGIGLERLVMLILKLGNIRLASMF 604


>gi|224093120|ref|XP_002309798.1| predicted protein [Populus trichocarpa]
 gi|222852701|gb|EEE90248.1| predicted protein [Populus trichocarpa]
          Length = 578

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 110/368 (29%), Gaps = 54/368 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  +  ++F EN F+ + S  +  S           +T + 
Sbjct: 226 AHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTTLIP 285

Query: 68  IQ-----------------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
                                    D   KP +L  S + + +    A    ++ F   +
Sbjct: 286 GSQEVANSPVDRIPKTKDGLIDWSQDFFGKPAFLTVSGQLNAETYATA-LSDVYTFGPTF 344

Query: 105 RNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R        H  EF M+E   A       M      ++       + I      +   F+
Sbjct: 345 RAENSNTSRHLAEFWMIEPELAFADLTDDMACATAYLQY----VVKHILENCKEDMEFFN 400

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
                 + +     A  D           D   L L+A++   +      W         
Sbjct: 401 TWIEKGIIDRLTDVAEKDFVQLTY----TDAVELLLKAKK---KFEFPVEWGCDLQSEHE 453

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             I       C  I+  YP    A       D +     ++    +       EL+   +
Sbjct: 454 RYITEEAFGGCPVIIRDYPKDIKAFYMRQNDDGKTVAAMDMLVPRV------GELIGGSQ 507

Query: 284 QRHRFE--KEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +  R E  ++  ++ K+  E++     +L          +G  +GF+RLV   TG  NI 
Sbjct: 508 REERLEYLEDRLDELKLNKESF---WWYLDLRRYGSVPHAGFGLGFERLVQFATGLENIR 564

Query: 341 EVIWTPFS 348
           + I  P  
Sbjct: 565 DAIPFPRV 572


>gi|145636232|ref|ZP_01791902.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145270754|gb|EDK10687.1| asparaginyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 467

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|119470316|ref|ZP_01613075.1| asparaginyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446488|gb|EAW27763.1| asparaginyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 465

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/360 (17%), Positives = 109/360 (30%), Gaps = 45/360 (12%)

Query: 13  DFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R  +       RN +  ++  ++ E  +  I +  +  S       +   ST  
Sbjct: 123 HAHLRPRTNMIGAVTRVRNCLAQAIHRFYHEQGYYWISTPIITASDCEGAGEMFRVSTLD 182

Query: 67  -------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          +D   K  +L  S + + +   +A   KI+ F   +R        
Sbjct: 183 MQNLPRTDKGDVDYSEDFFGKEAFLTVSGQLNGETYASAMS-KIYTFGPTFRAENSNTSR 241

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E + K   N+++   +   ++    +  +   F++    T   
Sbjct: 242 HLAEFWMVEPEVAFADLEDIAKLAENMLKYVFKAVLEE----RRDDMEFFAQRIEKTAIS 297

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
               +   D           D        +  G +   D  W           +      
Sbjct: 298 RLEEFVEKDFAQV-------DYTDAVEILKNCGKKFEFDVEWGVDLQSEHERYLAEEHFK 350

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               I   YP    A       D +     ++ A  I E+               R E+ 
Sbjct: 351 APVVIK-NYPRDIKAFYMRQNEDGKTVAAMDVVAPGIGEIIGGSQREERLDVLDARLEEM 409

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              K+         D  +   L        SG  +GF+RLV  VTG  N+ +VI  P ++
Sbjct: 410 GLNKE---------DYSWYRDLRKYGSVPHSGFGLGFERLVAYVTGMGNVRDVIAFPRTK 460


>gi|229074900|ref|ZP_04207909.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228708237|gb|EEL60401.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 432

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 105/339 (30%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       +  +  S  +Y  EN FI I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKATLAQSFSDYLTENDFIRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+           
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIDDFHE 237

Query: 133 MKD-CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVGETC--------------------EKELQQLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 T-LSEAQEILKSKYRKESPIGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 336 PNNENPSITDSFDLLYKGLEITSGAQRIHNYDLLLASFKE-----KGLHLEKFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|282860274|ref|ZP_06269344.1| asparagine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282586948|gb|EFB92183.1| asparagine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 463

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/352 (17%), Positives = 113/352 (32%), Gaps = 37/352 (10%)

Query: 13  DFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETH---------- 58
               R   F      R+ +  ++  YF E+ F    +  +  S      +          
Sbjct: 121 HMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGNMFQVTTLDLE 180

Query: 59  --IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
              ++   E   QD   K  +L  S +   +    A    I+ F   +R        H  
Sbjct: 181 RVAKSGKVEY-EQDFFGKRTHLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPRHLA 238

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A    E LM    + I+   + A          +    ++    T+ E   
Sbjct: 239 EFWMVEPEVAFIDKEDLMDLEEDFIKYCVQWA----LDNCKDDLEFLNQMIDKTLLERLE 294

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGIN 233
                D               +  +AQ+ G++      +   D+ S      +E +    
Sbjct: 295 GVLKQDFVRLSYTEGFN----ILKEAQEKGVKFEFPVTEWGMDLSSEHERYLVEEH--FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I++ YPA   +       D +  +  ++    I       E++    +   ++K + 
Sbjct: 349 RPVIMNDYPAEIKSFYMKKNEDGKTMQGTDVLFPRI------GEIIGGSVREENYDKLVA 402

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           E +K   +    D              G  +GF+RL++ VTG  NI +VI  
Sbjct: 403 EIEKRGMKVEQYDWYLDTRKYGSCPHGGFGLGFERLILFVTGMQNIRDVIPF 454


>gi|152969518|ref|YP_001334627.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238893987|ref|YP_002918721.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|262040970|ref|ZP_06014192.1| asparagine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330013883|ref|ZP_08307823.1| asparagine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|166231668|sp|A6T726|SYN_KLEP7 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|150954367|gb|ABR76397.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238546303|dbj|BAH62654.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259041664|gb|EEW42713.1| asparagine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328533315|gb|EGF60063.1| asparagine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 466

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 109/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E       + 
Sbjct: 244 LAEFWMLEPEVAFANLNDVAGLAEAMLKYVFKAVLEE----RADDMQFFAERVDKDAIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LQRFITADFAQV-------DYTDAVTILENCGKQFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|300814563|ref|ZP_07094817.1| asparagine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511331|gb|EFK38577.1| asparagine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 461

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 105/355 (29%), Gaps = 41/355 (11%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI- 67
           H R R          R++I  ++ ++F E  F+   +  +  S       +   +T  + 
Sbjct: 121 HLRPRTNTFNAVFRVRSLIAYAIHKFFQERGFVYFHAPIITASDAEGAGEMFQVTTLPLE 180

Query: 68  ------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                        +D   K   L  S +   +    A    ++ F   +R        H 
Sbjct: 181 DIPKNDEGKVDYKKDFFGKETNLTVSGQLEDEAFALA-FGNVYTFGPTFRAENSNTPRHA 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       M     +++                    F++     +    
Sbjct: 240 AEFWMIEPEMAFADLNVNMDVAEAMLKYIIRYV----LENAKEEMKFFNKFIDKDLL--- 292

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
              A +D   + +  ++          ++A         W           I   +    
Sbjct: 293 ---ARLDNVVSNEF-ERITYTQAIEILEKANKEFKFPVKWGIDLQTEHERYITEEVFKKP 348

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  YP    A       D +     +L    +       E++   ++ HR E   ++
Sbjct: 349 V-FVTNYPKEIKAFYMTENDDKKTVAAMDLLVPGV------GEIIGGSQREHRIEILEKK 401

Query: 295 KKKIYNETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K +       D    L         SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 402 MKDLNMNMDEYDWYLDLRRF-GTCIHSGYGLGFERAVMYITGMKNIRDVIPFPRT 455


>gi|301103370|ref|XP_002900771.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262101526|gb|EEY59578.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 514

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 110/335 (32%), Gaps = 40/335 (11%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
            +  +  +    RE+ ++  F+EI +  L     +E+    F+       +  +   L  
Sbjct: 207 IMRIQAAVSQLFREFLIQRNFVEIHTPKLVG-GASESGANCFT-----LKYFDQDAALAQ 260

Query: 81  SPEFSCKK-LLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           SP+   +     AG E++F     +R        H  EF  L+     + +   + +  +
Sbjct: 261 SPQTYKQMACAVAGLERVFEIGPVFRAENSNTHRHMCEFVGLDLEMTIKEHYHEVLEVFS 320

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
            +        ++ ++ +    N     E +   +                    +     
Sbjct: 321 DLFIYIFDGLKERYAKELATINEQYPFEPLKYNKP---------------SLIINFEEGV 365

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPR 257
              ++AG     +D  S    + L   ++     +   ILD++P           P D R
Sbjct: 366 KMLKEAGADQEPEDDLSTENEKWLGRLVKEKYDTD-FYILDKFPLAVRPFYTMPDPTDKR 424

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL 313
           ++  +++     E+ +    + DP     R ++    +   +         ID   L  L
Sbjct: 425 WSNSYDMMIRGEEIVSGAQRVHDPKLLMERMDELGVPQESMRN-------YIDSFRLGAL 477

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  G  +G +R+VML  G  NI +    P  
Sbjct: 478 ----PHGGGGIGLERVVMLYLGLGNIRKASMFPRD 508


>gi|109898198|ref|YP_661453.1| asparaginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123064673|sp|Q15UN9|SYN_PSEA6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|109700479|gb|ABG40399.1| asparaginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 465

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/371 (16%), Positives = 111/371 (29%), Gaps = 46/371 (12%)

Query: 3   QIPSQP---WWNRDFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
             P +    +     H R R  +       RN +  ++  +F EN +  + +  L  S  
Sbjct: 110 MAPKRHSLEYLREHAHLRPRTNVIGAVTRVRNCLSQAIHRFFHENGYCWVSTPILTASDT 169

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 QD   K  +L  S + + +    A   KI+ F
Sbjct: 170 EGAGEMFRVSTLDMMNVPTTEQGQVDFSQDFFGKETFLTVSGQLNGETYATAMS-KIYTF 228

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A      + +   ++++   +    +         
Sbjct: 229 GPTFRAENSNTSRHLAEFWMIEPEVAFADLSDIAQLSEDLLKYVFKAVLAERADDMAFFA 288

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
              ++ + IT  E               +  + D        Q  G +     +W    S
Sbjct: 289 QRINK-DAITRLEKVIE----------QDFVRMDYTDAIEILQNCGKKFEFPVSWGVDLS 337

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +          +   YP    A       D +             L     E++
Sbjct: 338 SEHERYLAEEHVGAPIIMQ-NYPKDIKAFYMRINDDNKTVAAM------DVLAPGIGEII 390

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +   +   ++  +    D  +   L        SG  +GF+RLV  VTG  
Sbjct: 391 GGSQREERLDVFDRRLAEMGLD--QEDYSWYRDLRRYGTVPHSGFGLGFERLVAYVTGMQ 448

Query: 338 NINEVIWTPFS 348
           N+ +VI  P +
Sbjct: 449 NVRDVIAFPRT 459


>gi|292654841|ref|YP_003534738.1| aspartyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371103|gb|ADE03330.1| aspartyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 434

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/370 (16%), Positives = 117/370 (31%), Gaps = 64/370 (17%)

Query: 3   QIPSQPWW----NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           Q+P  P              R               R  +Q ++R+ F + +  EI++  
Sbjct: 101 QLPLDPSGKVDAELSTRLDNRTLDLRKDEVKAIFEIRAEVQRAVRDKFRDLRATEINTPK 160

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +  + G E       TEL    +  +  ++  SP+   + ++ +G E++F     +R  E
Sbjct: 161 IVAT-GTEGG-----TELFPITYFGQEAFMNQSPQLFKQLMVGSGLERVFEVGPIFRAEE 214

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS---- 163
                H  E T +++  A   + + M  C  ++  A E   +                  
Sbjct: 215 HNTPRHLNEATSIDFESAFIDHTEAMDVCEAVVTAAYEAVEENCQDELEALGLEEEFEAP 274

Query: 164 --EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
             E   +T  EA  R   I+    LD        L     +  G  V             
Sbjct: 275 SGEFPRLTYEEAIER---INATGELDEQLVWGDDLPTEGEKALGEDVGE----------- 320

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLD 280
                           +  +P+         +  D   +  F++   N+EL +       
Sbjct: 321 -------------HYFITDWPSEIKPFYIKDHDDDETLSTGFDMMHPNMELVSGGQREHR 367

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
                  FE++      +  + +     +       MP  +G  +G +RL+M + G  NI
Sbjct: 368 FDHLVAGFEQQ-----GLDPDAFEY---YTKMFKYGMPPHAGFGLGGERLIMTMLGLENI 419

Query: 340 NEVIWTPFSQ 349
            E +  P  +
Sbjct: 420 REAVLFPRDR 429


>gi|229549454|ref|ZP_04438179.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|307277213|ref|ZP_07558317.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|312899799|ref|ZP_07759118.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312953411|ref|ZP_07772251.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229305691|gb|EEN71687.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|295113406|emb|CBL32043.1| asparaginyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|306506143|gb|EFM75309.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|310628620|gb|EFQ11903.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|311293049|gb|EFQ71605.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315035647|gb|EFT47579.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315146653|gb|EFT90669.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315152079|gb|EFT96095.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315159117|gb|EFU03134.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315170326|gb|EFU14343.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|327535658|gb|AEA94492.1| asparagine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 450

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 117/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L RN I  +  E+F E  FI+IDS  L   +P         
Sbjct: 129 MDHRHLWLRSS--KQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 179

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 180 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 238

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V+E F R    D
Sbjct: 239 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVSEPFKRITYDD 297

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 298 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 341

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 342 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 396

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 397 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 444


>gi|218289169|ref|ZP_03493405.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218240752|gb|EED07931.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 431

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 114/349 (32%), Gaps = 43/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W      R+R  L  R  I+ +++ +   N F  +D+  L  +   +T      
Sbjct: 116 LDHRHLWI--RVPRQRAILRIRAEIERAIQAFLDSNGFTRVDAPILTPASCEDT------ 167

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL    +     YL  S +    +  A    K++CF   +R  +     H  EF M+E 
Sbjct: 168 TELFETRYFDDTAYLTQSGQLYM-EAAAMALGKVYCFGPCFRAEKSKTRRHLIEFWMVEP 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E+ ++   +++    +                      I            D+
Sbjct: 227 EMAFVEHEENLRVQESLVEHVVQSV--------------------IDRCAPELELLGRDI 266

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L+    P   + Y  A +       D  W D F       +      +    ++RYP
Sbjct: 267 AR-LERVRAPFARMSYDDAIRWLRDHGFDIAWGDDFGSPHETALAEQ--FDTPVFIERYP 323

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
               +      P  P      ++ A     E+      + D    + RFE+      ++ 
Sbjct: 324 TKLKAFYMQPDPDRPEVVLCADMLAPEGYGEIIGGSQRIHDYELLKARFEE-----HRLP 378

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ETY    D           SG  +G +R +  + G +++ E I  P  
Sbjct: 379 EETYGWYLDLRR--YGSVPHSGFGLGLERTIAWICGLDHVREAILFPRM 425


>gi|255532907|ref|YP_003093279.1| asparaginyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255345891|gb|ACU05217.1| asparaginyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 482

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/364 (17%), Positives = 118/364 (32%), Gaps = 37/364 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          R+ +  ++ +++ E  F+ + +  +  S       +        
Sbjct: 119 AHLRFRTNTFNAIFKVRHALAFAIHQFYNERGFVYMHTPIITASDAEGAGEMFRVTTLDL 178

Query: 60  -RAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                TE    D   +  +     L  S +    +L A    +I+ F   +R        
Sbjct: 179 ENPPRTEDGKVD-FSEDFFARSTNLTVSGQL-EGELAAMAFGQIYTFGPTFRAENSNTTR 236

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M+   ++++     A     +  +   N   E E      
Sbjct: 237 HLAEFWMVEPEVAFADLEDNMQLAEDMLKYVIRYALDNCATEIDFLNNRLLEEEKSKPQN 296

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQA--------QQAGIRVAHDDTWSDIFSRILIE 224
             +  + I+      + D                   Q+   +   D+  +D+ S     
Sbjct: 297 ERSEMSLIEKLNFCLDNDFERLTYTEAIKILKSSKPNQKKQFKYLIDEWGADLQSEHERY 356

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +E +       IL  YPA   +            ++    A    L     E++   ++
Sbjct: 357 LVEKH--FKKPVILTDYPADIKSFYMRQNEPDEVGRKT--VAAMDILFPGIGEMVGGSQR 412

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             R +K +   +++      +   FL          SG  +GF+RLV+ V+G  NI +VI
Sbjct: 413 EERMDKLVARMEELNIPQEEL-WWFLDTRRFGSAPHSGFGLGFERLVLFVSGMTNIRDVI 471

Query: 344 WTPF 347
             P 
Sbjct: 472 AFPR 475


>gi|116328519|ref|YP_798239.1| asparaginyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331247|ref|YP_800965.1| asparaginyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281007|sp|Q04SB3|SYN_LEPBJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|122283693|sp|Q050D9|SYN_LEPBL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116121263|gb|ABJ79306.1| Asparagine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124936|gb|ABJ76207.1| Asparagine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 435

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 120/348 (34%), Gaps = 39/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           I  +  W R    ++   L  R+ +  ++R+YF E  F+ ID+  L  S   E+    FS
Sbjct: 118 ISQRHLWLRSS--KQLAILRVRDNLSFAIRKYFHERDFLLIDTPILTGS-VGESAGTLFS 174

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TE           YL  + +   +  + A   K+FC+   +R  +     H  EF M+E 
Sbjct: 175 TEYFDLG----NAYLAQTGQLYLEAAIFAH-NKVFCYGPTFRAEKSKTRRHLTEFWMVEA 229

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +   +K   + ++   +   Q                          +    D 
Sbjct: 230 EVAFAGHADNLKLQEDFVKTVIKETVQNSL--------------------QDLKVLERDP 269

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L   ++    + Y +A +       D  W D  +    + +   +       + +YP
Sbjct: 270 TPLLAYLEKDFPVIDYTKALEILKLKGEDIVWGDDINSEREQML--TMEFGGPIFIQKYP 327

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
              ++    + P +P+     +L A      +   E++   E+   +E  +   ++    
Sbjct: 328 REAKAFYMKVNPDNPKTVLNADLIAP-----DGVGEIIGGSEREENYENIILRLEEEKLP 382

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L          SG  +G +R++  + G  ++ E I  P  
Sbjct: 383 VESYDW-YLDLRKYGSVPHSGFGLGSERMIAWICGLQHVRECIPFPRM 429


>gi|293383609|ref|ZP_06629519.1| asparagine--tRNA ligase [Enterococcus faecalis R712]
 gi|293387278|ref|ZP_06631835.1| asparagine--tRNA ligase [Enterococcus faecalis S613]
 gi|312906159|ref|ZP_07765171.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909504|ref|ZP_07768359.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|291079121|gb|EFE16485.1| asparagine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083315|gb|EFE20278.1| asparagine--tRNA ligase [Enterococcus faecalis S613]
 gi|310627805|gb|EFQ11088.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290177|gb|EFQ68733.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 450

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 117/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L RN I  +  E+F E  FI+IDS  L   +P         
Sbjct: 129 MDHRHLWLRSS--KQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 179

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 180 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 238

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V+E F R    D
Sbjct: 239 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVSEPFKRITYDD 297

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 298 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 341

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 342 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 396

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 397 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 444


>gi|153813414|ref|ZP_01966082.1| hypothetical protein RUMOBE_03834 [Ruminococcus obeum ATCC 29174]
 gi|149830506|gb|EDM85597.1| hypothetical protein RUMOBE_03834 [Ruminococcus obeum ATCC 29174]
          Length = 448

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 110/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + + R     +  +  + R++  E  F EI +  +         ++  FS       + 
Sbjct: 140 RNIQERSKFKIQEALVRAFRDFLYEQGFTEIHTPKIGARGAEGGANLFKFS-------YF 192

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            KP  L  SP+F  +  +    +++F     +R  +     H  E+T L++   +    +
Sbjct: 193 HKPAVLAQSPQFYKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYIDGFE 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +          A    +K ++ +                    +  NI L      P  
Sbjct: 252 DIMGMETGFLQYAMELLKKDYAKE-------------------LQILNIQLPKVDQIPTV 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  L +++   ++ +          ++    +     +    +  YP+ +     +
Sbjct: 293 RFDKAKELVSEKYNRKIRNPYDLEPEEEALIGRYFKEEYDAD-FVFVTHYPSKKRPFYAM 351

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               D +FT  F+L    +E+      + D  + +       +   +   E     E +L
Sbjct: 352 DDPQDDKFTLSFDLLFHGLEVTTGGQRIHDYNQLK------AKIAARGMEEEGM--EQYL 403

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G+ +G +RL M + G  N+ E    P  
Sbjct: 404 DTFKHGMPPHGGLGIGLERLTMQLLGEENVREACLFPRD 442


>gi|150020425|ref|YP_001305779.1| asparaginyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149792946|gb|ABR30394.1| asparaginyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 431

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/348 (16%), Positives = 117/348 (33%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+   L  R+ +  ++R+++ EN FI++D+         E+    F 
Sbjct: 115 MDHRHLWLRSR--RQMHILNIRDTVLKAIRKFYWENGFIQVDTPIFTG-AIGESAGNLFK 171

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +          +YL  + +    +       K+F     +R  +     H  EF M E 
Sbjct: 172 IDYFDYG----KVYLAQTGQLYL-EAACMALGKVFNLGPTFRAEKSKTRRHLIEFWMNEA 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A+  +E  +K   N++    +   +      +      S+ E I              
Sbjct: 227 EVAYYEHEDNLKLQENLVSYIIKYILENASEHLHALNRDTSKLEKI-------------- 272

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                  + P   + Y +A +   +  +D  W D F      +I           +  YP
Sbjct: 273 -------EPPFPRITYTEAVKLLQKKGYDIEWGDDFGGDEETEIAKQ--FEKPVFVTHYP 323

Query: 243 -APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
              ++      P +P      +L A          E++   ++ H ++  ++  K+    
Sbjct: 324 RKAKAFYMQPDPENPDVVLCDDLIAP-----EGYGEIIGASQRIHDYDLLVERLKEFNLP 378

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L          SG  +G +R +  + G  +I E I  P +
Sbjct: 379 VEAYDW-YLDLRKFGSVPHSGFGLGIERTIAWIAGLEHIREAIPFPRT 425


>gi|15920386|ref|NP_376055.1| aspartyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|62287582|sp|Q976I3|SYD_SULTO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110590680|pdb|1WYD|A Chain A, Crystal Structure Of Aspartyl-Trna Synthetase From
           Sulfolobus Tokodaii
 gi|110590681|pdb|1WYD|B Chain B, Crystal Structure Of Aspartyl-Trna Synthetase From
           Sulfolobus Tokodaii
 gi|15621168|dbj|BAB65164.1| 429aa long hypothetical aspartyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 429

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 59/341 (17%), Positives = 119/341 (34%), Gaps = 43/341 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                +  +  +++   + RE   +  FIEI +   +  +      +           + 
Sbjct: 126 RRQEMQAVIKIQSLALKAFRETLYKEGFIEIFTPKIIASATEGGAQLFPVI-------YF 178

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            K  +L  SP+   K+L+A   E++F  A AWR  E     H  EF  ++   A   Y  
Sbjct: 179 GKEAFLAQSPQLY-KELMAGVVERVFEVAPAWRAEESDTPFHLAEFISMDVEMAFADYND 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    I+    +   ++      +      E                           
Sbjct: 238 VMQLLEKILHNIVKTIKEEGKEELKILNYEPPE------------------------VKI 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
           P + L Y +A +      ++  + D      +  +   L  +   I+D            
Sbjct: 274 PIKRLKYTEAIEILRSKGYNIKFGDDIGTPELRILNEELKEDLYFIVDWPSDARPFYTKS 333

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              +P  ++ F+L    +E+ +          +R   E+   +KK +  E++   E FL 
Sbjct: 334 KSENPELSESFDLIYKFLEIVSGSTRNH----KREVLEE-ALKKKGLKPESF---EFFLK 385

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                MP  +G  MG  RL++++TG  ++ E++  P  +  
Sbjct: 386 WFDYGMPPHAGFGMGLARLMVMLTGIQSVKEIVPFPRDKKR 426


>gi|319776245|ref|YP_004138733.1| asparaginyl tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123384|ref|ZP_08251948.1| asparagine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317450836|emb|CBY87060.1| asparaginyl tRNA synthetase [Haemophilus influenzae F3047]
 gi|327470966|gb|EGF16421.1| asparagine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 467

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/357 (16%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFV-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P  
Sbjct: 407 RMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRV 461


>gi|325955632|ref|YP_004239292.1| asparaginyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323438250|gb|ADX68714.1| Asparaginyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 482

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 121/367 (32%), Gaps = 43/367 (11%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R       +  RN +  ++ +YF E  F+ I++  +  S       +  F    
Sbjct: 122 QAHLRFRTNLFGAVMRVRNALMFAIHQYFNELDFVYINTPIITGSDAEGAGEM--FHVTN 179

Query: 67  IIQDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
              D++           +  +     L  S +    +  A G  KI+ F   +R      
Sbjct: 180 FDLDNLPRTEDGKVDYSQDFFGKATNLTVSGQL-EGEAAAMGLGKIYTFGPTFRAENSNT 238

Query: 112 -LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF M+E   A  + +Q M    + ++   + A  K           +++ +    
Sbjct: 239 SRHLAEFWMIEPEMAFYNLDQNMDLAEDFLKYVIQYAKDKCPDDLAFLAERYAKEQSQKP 298

Query: 171 AEAFARYANIDLGT--------TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
           A+  +    +D            L   +  D        ++   +   D    D+ S   
Sbjct: 299 ADERSELGLMDRLDYVLNNRFIRLSYTEAIDILKNSKPNKKGKFKYPVDGWGVDLQSEHE 358

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +E +       IL  YP    A       D +  +  ++    I       E++   
Sbjct: 359 RYLVEKHFKT--PVILFDYPQEIKAFYMRLNEDGKTVRAMDVLFPGI------GEIIGGS 410

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           ++  R +   +  K+   +   I   +           SG  +G +RLV+ VTG  NI +
Sbjct: 411 QREERLDVLDERIKQFGIDQEEI-WWYRDTRRFGTVPHSGFGLGLERLVLFVTGMGNIRD 469

Query: 342 VIWTPFS 348
           VI  P +
Sbjct: 470 VIPFPRT 476


>gi|310659670|ref|YP_003937391.1| asparaginyl tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308826448|emb|CBH22486.1| asparaginyl tRNA synthetase [Clostridium sticklandii]
          Length = 464

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 104/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F +  F+ + +  +  S       +   +T  +
Sbjct: 123 AHLRPRSNAFSAVFRVRSVAAYAIHKFFQDRGFVYVHTPIITGSDAEGAGEMFRVTTLDL 182

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   K   L  S +   +    A ++ I+ F   +R        H
Sbjct: 183 KNPPKNADGSIDNTQDFFGKETNLTVSGQLEGEIFALAYKD-IYTFGPTFRAENSNTSRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M+   ++I+                    F       +   
Sbjct: 242 AAEFWMIEPEIAFAELEDNMELAEDMIKYIISYV----LENAPEEMEFFGSIVDKDLLPR 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                + D G                  Q++G    +  +W           I   +   
Sbjct: 298 LQNVVSNDFGRVTYTE-------AIKLLQESGHNFEYPVSWGMDLQTEHERYITEQIFKK 350

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM- 292
               +  YP    A       D +     +L    I              QR   E  + 
Sbjct: 351 PV-FVTDYPKEIKAFYMRLNEDEKTVAAMDLLVPGIGEIIGGS-------QREEREDVLA 402

Query: 293 -QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + +    NE       +L        + +G  +GF+R++M +TG  NI +VI  P +
Sbjct: 403 GKIRAMGLNEEDY--WWYLELRKYGGVKHAGYGLGFERMIMYLTGMTNIRDVIPFPRT 458


>gi|228997302|ref|ZP_04156924.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229004927|ref|ZP_04162654.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228756275|gb|EEM05593.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228762394|gb|EEM11319.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 432

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R +     ++ +  +  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERIQAIFTIQSTLVQAFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQ 131
           K  YL  SP+F  + ++A G E +F  A  +R        H  E+  L+      E + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGFELVFEIAPVYRAEHHNSSRHLNEYISLDVEMGFIEDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    +++R   E   QK                     E       + +    + P  
Sbjct: 238 VMALEADVLRYMFEQVGQKC--------------------EKELVLLQVTVPIITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   +++ + ++   G +    +  YP     +   
Sbjct: 278 TLAEAQSILKTKYRKESPAGDLDTEG-EKLVGKYVKETYGSD-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K+K         E ++
Sbjct: 336 PNKENQAVTDSFDLLYKGLEITSGAQRIHEYRMLLASF------KEKGLQPENF--ESYI 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +RLV      +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERLVYKFLELSNVREASAFPRD 426


>gi|78223615|ref|YP_385362.1| asparaginyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|123770257|sp|Q39SY7|SYN_GEOMG RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|78194870|gb|ABB32637.1| Asparaginyl-tRNA synthetase, class IIb [Geobacter metallireducens
           GS-15]
          Length = 461

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 96/358 (26%), Gaps = 46/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  +F E  F+ + +  +  S       +  F    +
Sbjct: 121 AHLRPRSNTFGAVFRVRSSVAQAVHRFFAERGFLYVHTPIITTSDCEGAGEM--FRVTTL 178

Query: 68  IQDH---------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                          +  +     L  S +   +    A    I+ F   +R        
Sbjct: 179 DPAAPPLLEGEVDFSRDFFAAQAGLTVSGQLEGELFAQA-FSDIYTFGPTFRAENSNTPR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A               R                  +   +     V +
Sbjct: 238 HAAEFWMIEPEMAFADLMADAALAEEFFRYLCRHVLDACGEDMAFFNDHIDKGLIARVEQ 297

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                          +    +      + ++A +   +   W           +   +  
Sbjct: 298 -----------VANSSFAIMEYGEAIERLKKATVTFEYPVEWGLDLQTEHERYLTEQVVG 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF-EKE 291
                +  YP    A       D +     +L    +       E++   ++  R    E
Sbjct: 347 GPV-FVINYPKHIKAFYMRVNDDNKTVAAMDLLVPKV------GEIIGGSQREERLPVLE 399

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +  +   N        +L          +G  +GF+RL+M +TG  NI +VI  P +
Sbjct: 400 GRMAEVGVNPEGL--WWYLDSRRWGSTPHAGFGLGFERLIMYLTGMENIRDVIPFPRT 455


>gi|319897125|ref|YP_004135320.1| asparaginyl tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432629|emb|CBY80990.1| asparaginyl tRNA synthetase [Haemophilus influenzae F3031]
          Length = 467

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/357 (16%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFV-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P  
Sbjct: 407 RMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPRV 461


>gi|315155305|gb|EFT99321.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0043]
          Length = 450

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 117/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L RN I  +  E+F E  FI+IDS  L   +P         
Sbjct: 129 MDHRHLWLRSS--KQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 179

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 180 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 238

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V+E F R    D
Sbjct: 239 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVSEPFKRITYDD 297

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 298 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 341

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 342 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 396

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 397 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 444


>gi|320547173|ref|ZP_08041467.1| asparagine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320448160|gb|EFW88909.1| asparagine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 448

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 117/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   +  RN I  +  ++F +N FI+ DS  L  +   ++      
Sbjct: 125 MDHRHLWLRSR--KQMAIMQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +      +      +     +AE F R +  D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALEI-LERDVDLLKKYIAEPFKRVSYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L   +  +                      D F       I    G+   T +  YP
Sbjct: 295 IDLLQEHENDEDAD------------YEHLEHGDDFGSPHETWISNYFGV--PTFVINYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +   +  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSVREDDYDTLVAKMDALGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          +G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEY-EFYLDLRKYGSVPHAGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|296242398|ref|YP_003649885.1| asparaginyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296094982|gb|ADG90933.1| asparaginyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 432

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 112/350 (32%), Gaps = 48/350 (13%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFST 64
           +  W R   Y        ++ + ++ REYF +N + E+    L  S   G  T       
Sbjct: 119 RHLWIRSPRYAS--LFKIKHTVINAGREYFSKNGWWEVTPPILTASACEGGAT------- 169

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
            L    +  +  +L  S +   + L+    EK++    ++R  +     H  E+  LE  
Sbjct: 170 -LFPVQYFDQTAFLSQSAQLYLEVLIY-TLEKVYSLTPSFRAEKSRTRRHLAEYWHLEPE 227

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A      +MK    ++                           +   +        D+G
Sbjct: 228 AAWYDMNDMMKVAEELVSYIVSKV--------------------LDERKRELEEFGRDIG 267

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                 + P   + Y +A +   +   +  W D         +   +       L  +P 
Sbjct: 268 KLRKALEVPYPRIRYDEAIEILQKKGVNVKWGDDLGADEERVL--TMEFETPFFLTHFPK 325

Query: 244 PE-SALANIYPADPRFTKRFELY--ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
              S    + P++P+    F+L       E+        D      R  ++       YN
Sbjct: 326 HIKSFYMKVDPSNPKVVLGFDLLAPEGYGEIIGGGQREDDYKLLLERLIEQ------GYN 379

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                 + +L          SG  +G +R+VM +TG ++I E +  P  +
Sbjct: 380 PDDY--KWYLDLRKYGSVPHSGFGLGIERIVMWITGLDHIRETMPFPRYR 427


>gi|90961666|ref|YP_535582.1| asparaginyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227890754|ref|ZP_04008559.1| asparaginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|301300794|ref|ZP_07206978.1| asparagine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|123269944|sp|Q1WU36|SYN_LACS1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|90820860|gb|ABD99499.1| Asparaginyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|227867163|gb|EEJ74584.1| asparaginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300851644|gb|EFK79344.1| asparagine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 433

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/352 (16%), Positives = 118/352 (33%), Gaps = 46/352 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F +  FI++D+  L   +P         
Sbjct: 115 MDHRHLWLRSK--KQFAIMQIRNEMIRATYEFFNKEGFIKLDAPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++  +  YL  S +   ++  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTELFHTEYFDRDAYLSQSGQLY-EEAGAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      +   +   +    D
Sbjct: 225 PEMAFMHQEESLEIQERYVAYLVQSV--------------------LDNCQYPLQILGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                   + P   + Y +A +   +     D  W + F       +  +   +    + 
Sbjct: 265 TEVLKRYTELPYPRISYDEAIELLQQSGKFPDVKWGEDFGSPEETYLAEH--FSKPVFVM 322

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH--RFEKEMQEKKK 297
            YP             P  T+   +   ++       E++   E+    ++ +E   K  
Sbjct: 323 NYPKAIKPFYM----KPHPTRDDVVICADMLAPEGYGEIIGGSERATDPKYLEEQIIKAG 378

Query: 298 IYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  + Y   E +L          SG  +G +R V  +TG ++I E I  P  
Sbjct: 379 LDVKDY---EWYLDLRRYGSVPHSGFGLGLERAVTWITGEDHIREAIPFPRL 427


>gi|219870610|ref|YP_002474985.1| asparaginyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|259511568|sp|B8F3Y5|SYN_HAEPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|219690814|gb|ACL32037.1| asparaginyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 467

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 109/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRGEDGKVDFSQDFFGRESFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++       ++    +  +   F +    TV   
Sbjct: 245 LAEFWMVEPEFAFATLADNAKLAEDMLKYVFRAVLEE----RKDDLKFFEKHIDNTVISR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G        W    S      +      +
Sbjct: 301 LENFINSDFA-------QIDYTDAIEVLLKSGKNFEFPVEWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++     P D  +   L        SG  +GF+RL++ VTG  NI EVI  P 
Sbjct: 407 RMVEMGL--NPEDYWWYRDLRRYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPR 460


>gi|29376869|ref|NP_816023.1| asparaginyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227519904|ref|ZP_03949953.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227553908|ref|ZP_03983955.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|257084665|ref|ZP_05579026.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|307270869|ref|ZP_07552156.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307271487|ref|ZP_07552759.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307285841|ref|ZP_07565975.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307287739|ref|ZP_07567782.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|312903710|ref|ZP_07762884.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|38258305|sp|Q831X4|SYN_ENTFA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|29344334|gb|AAO82093.1| asparaginyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227072698|gb|EEI10661.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227176967|gb|EEI57939.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|256992695|gb|EEU79997.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|306501477|gb|EFM70780.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306502602|gb|EFM71869.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306511759|gb|EFM80757.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306512782|gb|EFM81427.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|310632902|gb|EFQ16185.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315025447|gb|EFT37379.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315032867|gb|EFT44799.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315146020|gb|EFT90036.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315150177|gb|EFT94193.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315161738|gb|EFU05755.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315164838|gb|EFU08855.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315173639|gb|EFU17656.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315574391|gb|EFU86582.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315578688|gb|EFU90879.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|315580135|gb|EFU92326.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 450

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 117/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L RN I  +  E+F E  FI+IDS  L   +P         
Sbjct: 129 MDHRHLWLRSS--KQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 179

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 180 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 238

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V+E F R    D
Sbjct: 239 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVSEPFKRITYDD 297

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 298 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 341

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 342 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 396

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 397 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 444


>gi|253681525|ref|ZP_04862322.1| asparagine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561237|gb|EES90689.1| asparagine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 463

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F +  F+ + +  +  S       +  F    +
Sbjct: 122 AHLRPRSNAFSAVFRVRSLAAYAIHKFFQDQGFVYVHTPIITGSDCEGAGEM--FRVTTL 179

Query: 68  IQDHIRKP----------LY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             D++ K            +     L  S +   +    A    ++ F   +R       
Sbjct: 180 DMDNLPKDEQGNIDYKEDFFGKQSNLTVSGQLEAEIYALA-FRNVYTFGPTFRAENSNTA 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M     +++                    F++     + 
Sbjct: 239 RHASEFWMIEPEMAFAELKDYMDVAEEMVKYIINYV----RENAPEEMEFFNKFIDKGLL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N D                    Q++G +  +   W           +   + 
Sbjct: 295 ERLDNVVNSDFARISYTE-------AVEMLQKSGAQFEYPVEWGIDLQTEHERYLTEEIY 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    I       E++   ++  R +  
Sbjct: 348 KKPV-FVTDYPKDIKAFYMRMNDDNKTVAAADLLVPGI------GEIIGGSQREERLDLL 400

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                ++          +L        + +G  +GF+R++M +TG +NI +V+  P +
Sbjct: 401 EARMAELGLNKEDY-WWYLELRKYGETKHAGYGLGFERMIMYLTGMSNIRDVLPFPRT 457


>gi|10835611|pdb|1EOV|A Chain A, Free Aspartyl-Trna Synthetase (Asprs) (E.C. 6.1.1.12) From
           Yeast
          Length = 487

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 113/349 (32%), Gaps = 39/349 (11%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               +  +    REY    +F E+ +  L  +P +E     F
Sbjct: 159 DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAP-SEGGSSVF 217

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                   + +   YL  SP+F+ ++L+ A  E+++     +R        H  EFT L+
Sbjct: 218 EVT-----YFKGKAYLAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTEFTGLD 272

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A E +   + D ++ +         K F           E E +        +    
Sbjct: 273 MEMAFEEHYHEVLDTLSELFVFIFSELPKRF---------AHEIELVRKQYPVEEFKLPK 323

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
            G  +    +    +L    ++ G              +++ +K           ILD++
Sbjct: 324 DGKMVRLTYKEGIEMLRAAGKEIGDFEDLSTENEKFLGKLVRDKY-----DTDFYILDKF 378

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           PA+P+++  ++ +    E+ +    + D    + R       K    +
Sbjct: 379 PLEIRPFYTMPDPANPKYSNSYDFFMRGEEILSGAQRIHDHALLQER------MKAHGLS 432

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P  +D+        P  +G  +G +R+VM      NI      P  
Sbjct: 433 PEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRD 481


>gi|295107912|emb|CBL21865.1| asparaginyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 463

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 100/355 (28%), Gaps = 39/355 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T   
Sbjct: 122 THLRPRTNTFQAVFRVRSLCAYAIHKFFQEKGFVYVHTPLITGSDCEGAGEMFQVTTLDM 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K   L  S + + +    A    I+ F   +R        H
Sbjct: 182 KNPPMNEDGTVDYSQDFFGKETNLTVSGQLNGETYAQA-FRNIYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M     +++                  N F+      + + 
Sbjct: 241 AAEFWMIEPECAFADLDDNMDLAEEMLKYVIRYV----LENAPEEMNFFNSFIDKGLLDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N + G                  ++   +  +   W           +   +   
Sbjct: 297 LNHVVNSEFGHVTYTE-------AIELLEKNNDKFDYKVFWGCDLQTEHERYLTEQIFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +     I       +  D  ++      EM 
Sbjct: 350 PV-FVTDYPKEIKAFYMKQNEDGKTVAAMDCLVPGIGEIIGGSQREDDYDKLKARMDEMG 408

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K     E Y    D         + SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 409 LKA----EEYQFYMDLRK--YGSTRHSGFGLGFERCVMYLTGMGNIRDVIPFPRT 457


>gi|291546775|emb|CBL19883.1| aspartyl-tRNA synthetase, archaeal type [Ruminococcus sp. SR1/5]
          Length = 443

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 107/334 (32%), Gaps = 40/334 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLY 77
           R     +  +  + R+Y  E  F EI +  +         ++           +  KP  
Sbjct: 140 RAKFKIQEALVRAFRDYLYEKGFTEIHTPKIGARGAEGGANL-------FKLSYFHKPAV 192

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+F  +  +    +++F     +R  +     H  E+T L++   + +  + + + 
Sbjct: 193 LAQSPQFYKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYINGFEDIMEM 251

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
                  A    +K ++ +                        ++L      P       
Sbjct: 252 ETGFLQYAVELLKKDYAHELS-------------------ILKVELPKVDKIPAVRFDKA 292

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA-D 255
             L A++   ++ +          ++    +     +    +  YP+ +     +    D
Sbjct: 293 KELVAEKYNRKIRNPYDLEPEEEALIGRYFKEEYDAD-FVFVTHYPSKKRPFYAMDDPSD 351

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            +FT  F+L    +E+      + D    + +        + +  E     E +L     
Sbjct: 352 EKFTLSFDLLFKGLEVTTGGQRIHDYQMLKDKI-----AARGMDEEGM---EQYLDTFKH 403

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            MP   G+ +G +RL M + G  N+ E    P  
Sbjct: 404 GMPPHGGLGIGLERLTMQILGEENVRETCLFPRD 437


>gi|229102819|ref|ZP_04233515.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228680604|gb|EEL34785.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 432

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 105/339 (30%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       +  +  S  +Y  EN FI I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKATLAQSFSDYLTENDFIRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+           
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIDDFHE 237

Query: 133 MKD-CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVGETC--------------------EKELQQLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 T-LSEAQEILKSKYRKESPIGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 336 PNKENPTITDSFDLLYKGLEITSGAQRIHNYDLLLASFKE-----KGLHLEKFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 426


>gi|90408625|ref|ZP_01216779.1| asparaginyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310269|gb|EAS38400.1| asparaginyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 466

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 106/357 (29%), Gaps = 43/357 (12%)

Query: 13  DFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R  +       RN +  ++  +F E  F  I +  +  S       +   ST  
Sbjct: 124 HAHLRPRTNMFGAVTRVRNCLSHAIHNFFYERGFNWISTPIITGSDCEGAGEMFRVSTLD 183

Query: 67  I-------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCL 112
           +              QD   K  ++  S + + +    A    ++ F   +R        
Sbjct: 184 LENLPKTADGKVDYKQDFFGKETFMTVSGQLNAETYACA-LSNVYTFGPTFRAENSHTTR 242

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A      + +   ++++   +   ++             + E I+  E
Sbjct: 243 HLAEFWMVEPEIAFADLNDVAQLAEDMLKYVFKAVLEERADDMAFFAQRVDK-EAISRLE 301

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                          +  + D        +  G    +   W           +      
Sbjct: 302 NM----------INSDFVRMDYSEAIEILENCGQDFEYPVKWGVDLQSEHERYLAEKHVG 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               +   YP    A      AD +     ++ A  I       E++   ++    E   
Sbjct: 352 APIILQ-NYPKDIKAFYMKLNADGKTVAAMDVIAPGI------GEIIGGSQREENLEALD 404

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +   ++       D  +   L        +G  +GF+RLV  VTG  NI +VI  P 
Sbjct: 405 KRLAEMGL--NKDDYSWYRDLRKYGTVPHAGFGLGFERLVSYVTGVQNIRDVIAFPR 459


>gi|307291045|ref|ZP_07570931.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306497894|gb|EFM67425.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|315030989|gb|EFT42921.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 450

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 116/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L RN I  +  E+F E  FI+IDS  L   +P         
Sbjct: 129 MDHRHLWLRSS--KQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 179

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 180 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 238

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V E F R    D
Sbjct: 239 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVLEPFKRITYDD 297

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 298 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 341

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 342 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 396

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 397 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 444


>gi|127512828|ref|YP_001094025.1| asparaginyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166231675|sp|A3QE68|SYN_SHELP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|126638123|gb|ABO23766.1| asparaginyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 466

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 105/356 (29%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       RN +  ++  ++ E  FI + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSHAIHNFYNEEGFIWVSTPLITASDCEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRTDDGKVDFSEDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      +      +++           + +  +   F++    TV E 
Sbjct: 244 LAEFWMVEPEVAFADLNDVAGLAERMLKYCFRAV----LNERRDDLEFFAQRVDKTVIER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D           D        +  G +   D  W           +       
Sbjct: 300 LESFVNSDFAQV-------DYTDAIEILKSCGKKFEFDVEWGIDLQSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGAQREERLDVLDT 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++       D  +   L        SG  +GF+RLV  VTG +NI +VI  P 
Sbjct: 406 RLDEMGLSKE--DYWWYRDLRRYGTVPHSGFGLGFERLVSYVTGVSNIRDVIPFPR 459


>gi|307131486|ref|YP_003883502.1| asparaginyl-tRNa synthetase [Dickeya dadantii 3937]
 gi|306529015|gb|ADM98945.1| Asparaginyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 466

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 114/360 (31%), Gaps = 49/360 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  YF ++ F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLVGAVARVRHTLAQAIHRYFHQSGFYWVSTPIITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFSEDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + + +     ++++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMIEPEVAFATLDDVAALAESLLKFVFKAVLEE----RADDMKFFAERVDKEAISR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        +  G    +  +W    S      +       
Sbjct: 300 LERFVSSDFAQV-------DYTDAITILENCGQTFENPVSWGIDLSSEHERYLAEKH-FQ 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              ++  YP    A      +D +             L     E++   ++  R E ++ 
Sbjct: 352 APVVVKNYPKDIKAFYMRMNSDGKTVAAM------DVLAPGIGEIIGGSQREERLE-QLD 404

Query: 294 EKKKIYNETYPI---DEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +     E   +   D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 405 IR----LEEMGLSKEDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|1064982|pdb|1ASY|A Chain A, Class Ii Aminoacyl Transfer Rna Synthetases: Crystal
           Structure Of Yeast Aspartyl-Trna Synthetase Complexed
           With Trna Asp
 gi|1064984|pdb|1ASY|B Chain B, Class Ii Aminoacyl Transfer Rna Synthetases: Crystal
           Structure Of Yeast Aspartyl-Trna Synthetase Complexed
           With Trna Asp
 gi|1064986|pdb|1ASZ|A Chain A, The Active Site Of Yeast Aspartyl-Trna Synthetase:
           Structural And Functional Aspects Of The Aminoacylation
           Reaction
 gi|1064988|pdb|1ASZ|B Chain B, The Active Site Of Yeast Aspartyl-Trna Synthetase:
           Structural And Functional Aspects Of The Aminoacylation
           Reaction
          Length = 490

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 113/349 (32%), Gaps = 39/349 (11%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               +  +    REY    +F E+ +  L  +P +E     F
Sbjct: 162 DTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAP-SEGGSSVF 220

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                   + +   YL  SP+F+ ++L+ A  E+++     +R        H  EFT L+
Sbjct: 221 EVT-----YFKGKAYLAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTEFTGLD 275

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A E +   + D ++ +         K F           E E +        +    
Sbjct: 276 MEMAFEEHYHEVLDTLSELFVFIFSELPKRF---------AHEIELVRKQYPVEEFKLPK 326

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
            G  +    +    +L    ++ G              +++ +K           ILD++
Sbjct: 327 DGKMVRLTYKEGIEMLRAAGKEIGDFEDLSTENEKFLGKLVRDKY-----DTDFYILDKF 381

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           PA+P+++  ++ +    E+ +    + D    + R       K    +
Sbjct: 382 PLEIRPFYTMPDPANPKYSNSYDFFMRGEEILSGAQRIHDHALLQER------MKAHGLS 435

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P  +D+        P  +G  +G +R+VM      NI      P  
Sbjct: 436 PEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRD 484


>gi|260914055|ref|ZP_05920528.1| asparagine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260631688|gb|EEX49866.1| asparagine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 467

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRDDKGAVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMIEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLKFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         Q+G +     +W    S      +      +
Sbjct: 301 LENFINSDFA-------QIDYTDAIEVLLQSGKKFEFPVSWGIDLSSEHERYLAEEHFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPEDYWWYRDLRRYGTVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 460


>gi|260582483|ref|ZP_05850274.1| asparaginyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094463|gb|EEW78360.1| asparaginyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 477

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 136 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 195

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 196 ENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 254

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 255 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 310

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 311 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 363

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 364 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDK 416

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 417 RMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLGFERLIVYVTGVQNIRDVIPFPR 470


>gi|114563340|ref|YP_750853.1| asparaginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299607|sp|Q081Q0|SYN_SHEFN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|114334633|gb|ABI72015.1| asparaginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 466

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/373 (16%), Positives = 113/373 (30%), Gaps = 51/373 (13%)

Query: 3   QIPSQPW---WNRD-FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            + ++       R+  H R R  +       RN +  ++  ++ +  FI + +  +  S 
Sbjct: 110 PMSAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHQEGFIWVSTPLITASD 169

Query: 53  PGNETHIRAFSTELIIQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKI 97
                 +  F    +                 D   K  +L  S + + +    A   K+
Sbjct: 170 CEGAGEM--FRVSTLDMENLPRTAEGKVDYDKDFFGKESFLTVSGQLNAETYACA-LSKV 226

Query: 98  FCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN 156
           + F   +R        H  EF M+E   A  + +   +    +++ A     ++    + 
Sbjct: 227 YTFGPTFRAENSNTTRHLAEFWMVEPEVAFATLDDAAELAEKMLKFAFSAVLEE----RM 282

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
            + N F+E    TV E    + + D           D        +  G +      W  
Sbjct: 283 DDLNFFNERVDKTVIERLQAFVSSDFAQV-------DYTDAVEILKNCGKKFEFAVEWGI 335

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
                    +          +   YP    A       D +             L     
Sbjct: 336 DLQSEHERYLAEEHFKAPVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIG 388

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVT 334
           E++   ++  R +       ++       D  +   L        SG  +GF+RLV  VT
Sbjct: 389 EIIGGAQREERLDVLDARLAEMDLS--QEDYWWYRDLRRYGTVPHSGFGLGFERLVSYVT 446

Query: 335 GANNINEVIWTPF 347
           G NNI +VI  P 
Sbjct: 447 GVNNIRDVIPFPR 459


>gi|312889925|ref|ZP_07749469.1| asparaginyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311297457|gb|EFQ74582.1| asparaginyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 479

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 62/364 (17%), Positives = 115/364 (31%), Gaps = 41/364 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------- 58
            H R R          RN +  ++  +F E  F+ + +  +  S      ET        
Sbjct: 120 AHLRFRTNTFGSVFRLRNALSFAVHRFFQERGFVYLHTPVITASDAEGAGETFRVTTLDP 179

Query: 59  IRAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +   TE    D  ++  +     L  S +    +L A     I+ F   +R        
Sbjct: 180 AKPPLTESGEID-FKQDFFGKATNLTVSGQL-EGELGAMALSDIYTFGPTFRAENSNTTR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A     + M     +++     A +              E E     +
Sbjct: 238 HLAEFWMIEPEMAFCDLAENMDTAEALLKYVISYALEHNREDIEFLSQRLLEEEKSKPQQ 297

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQA--------QQAGIRVAHDDTWSDIFSRILIE 224
             +    ++      + D                   ++   +   +   +D+ S     
Sbjct: 298 ERSEMNLVEKLQFCLDNDFERLTYTEAIEILRNSPHNKKKKFQYLVEGWGTDLQSEHERY 357

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +E +       IL  YP    A       D +  +  ++    I       E++   ++
Sbjct: 358 LVEKH--FKKPVILTDYPKEIKAFYMRQNDDGKTVRAMDILFPGI------GEIVGGSQR 409

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             R +K  Q   ++      +   +L        Q +G  +GF+RLV+ VTG  NI +VI
Sbjct: 410 EERLDKLEQRMDEMGIPKDEL-WWYLDTRRFGACQHAGFGLGFERLVLFVTGMGNIRDVI 468

Query: 344 WTPF 347
             P 
Sbjct: 469 PFPR 472


>gi|154491796|ref|ZP_02031422.1| hypothetical protein PARMER_01413 [Parabacteroides merdae ATCC
           43184]
 gi|154088037|gb|EDN87082.1| hypothetical protein PARMER_01413 [Parabacteroides merdae ATCC
           43184]
          Length = 468

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 105/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F +  F    +  +  S       +   +T   
Sbjct: 124 AHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPLITASDCEGAGQMFQVTTMNL 183

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A   +I+ F   +R        H
Sbjct: 184 YDLKKDENGSIVYDNDFFGKQASLTVSGQLEGELAATA-LGQIYTFGPTFRAENSNTPRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M+     I+   + A          +    ++     + E 
Sbjct: 243 LAEFWMIEPEVAFNDILDNMQLAEEFIKYCVQWA----LDNCMDDIKFLNDMFDKGLIER 298

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
                  D                  +A   G        W  D+ S      +E +   
Sbjct: 299 LQGVLKDDFVRLSYTEGIKILE----EAVAKGHTFEFPVYWGVDLASEHERFLVEEH--F 352

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +  +R  + 
Sbjct: 353 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLLNRINE- 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +      +   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 ------MGIPMKDM-WWYLDTRRFGTVPHSGFGLGFERLLLFVTGMTNIRDVIPFPRT 462


>gi|323144601|ref|ZP_08079189.1| asparagine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415610|gb|EFY06356.1| asparagine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 466

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/359 (14%), Positives = 101/359 (28%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       +  RN    ++  +F E  F+ + +  +  S       +  F+   +
Sbjct: 125 AHLRPRTNLIGAVMRIRNTAAYAIHSFFQERGFMWVSTPLITASDCEGAGEM--FTVTNL 182

Query: 68  IQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +                  +  YL  S + + +   +A   K + F   +R  +    
Sbjct: 183 DLNNIPKDDKGQVDYSKDFFGRHAYLTVSGQLNVETYASA-FSKCYTFGPTFRAEDSNTT 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M E   A            ++++             +  +     E       
Sbjct: 242 RHLAEFWMCEPEMAFTDLNGCAAVAEDMLKYVFRTV----LELRRDDMEFIVERVDKDAI 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               R+ N D           D        +  G +      W           +     
Sbjct: 298 GRLERFINADFAQV-------DYTDAIKILETCGKKFEFPVKWGIDLQSEHERYLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
            +   +   YP    A       D +             L     E++   ++  R E  
Sbjct: 351 KSPVVVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEML 403

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +  +++          +   L        SG  +GF+RL++ +TG  N+ +VI  P +
Sbjct: 404 DKRIEEMGLNKNAY--WWYRDLRRYGSVPHSGFGLGFERLIVYITGVGNVRDVIPFPRT 460


>gi|320540482|ref|ZP_08040132.1| asparaginyl tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320029413|gb|EFW11442.1| asparaginyl tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 466

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 109/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  Y+ EN F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRYYHENGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRTDQGAIDFSEDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + + +      +++   +    +       +   F+E       + 
Sbjct: 244 LAEFWMIEPEVAFATLDDVAALAEKMLKYVFQAVLNERID----DMKFFAERVDKDAIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D                      +G    +  +W    S      +       
Sbjct: 300 LQRFVSSDFAQVSYTE-------AVEILLASGQTFENPVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDQ 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        +G  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLAEMGLNKE---DYGWYRDLRRYGTVPHAGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|315166437|gb|EFU10454.1| asparaginyl-tRNA synthetase [Enterococcus faecalis TX1341]
          Length = 450

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 116/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L RN I  +  E+F E  FI+IDS  L   +P         
Sbjct: 129 MDHRHLWLRSS--KQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 179

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 180 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 238

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V E F R    D
Sbjct: 239 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVLEPFKRITYDD 297

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 298 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 341

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 342 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 396

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 397 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 444


>gi|164688109|ref|ZP_02212137.1| hypothetical protein CLOBAR_01754 [Clostridium bartlettii DSM
           16795]
 gi|164602522|gb|EDQ95987.1| hypothetical protein CLOBAR_01754 [Clostridium bartlettii DSM
           16795]
          Length = 439

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 112/343 (32%), Gaps = 48/343 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                R     +N I+ + R+Y     F +I +   +  S    +       E+   ++ 
Sbjct: 131 RRPEIRAIFKVQNEIEQAFRDYLRSKNFEQIHTAKIIDSSTEGGS-------EMFTVNYF 183

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH----E 127
            +  +L  SP+F  + ++ AG E+++   HA+R        H  E+  L+          
Sbjct: 184 DRRSFLAQSPQFYKQMMVGAGFERVYEIGHAYRAELHNTWRHLNEYVSLDVEMGFIKDEF 243

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
               L +  ++ +        +K      V      +   IT+ EA              
Sbjct: 244 ELMDLEEGFLDYLFKHLNKVCKKELEMYKVELPNEVKIPRITLEEAHK------------ 291

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                      +  ++   +    +  +     ++ + ++   G      L +YP  +  
Sbjct: 292 -----------ILLEKYNKKSPIGNIDAKG-EELICDYVKKEYGTE-FVFLTKYPVAKRP 338

Query: 248 LA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +       D   TK F+L    +E+      + D    +         K  +  E +   
Sbjct: 339 MYTMPDDEDKTLTKSFDLIYDGLEITTGGQRINDYEMLKE-----NIIKFGLNPEDF--- 390

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +L      MP   G A+G +RL M +   +NI E    P  
Sbjct: 391 DFYLDTFKYGMPPHGGFAIGLERLTMKILKLSNIREATLVPRD 433


>gi|154484484|ref|ZP_02026932.1| hypothetical protein EUBVEN_02198 [Eubacterium ventriosum ATCC
           27560]
 gi|149734332|gb|EDM50249.1| hypothetical protein EUBVEN_02198 [Eubacterium ventriosum ATCC
           27560]
          Length = 463

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 105/359 (29%), Gaps = 49/359 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++   ++ ++F E  F+ + +  +  S       +  F    + 
Sbjct: 123 HLRPRTNTFQAVFRVRSLCAYAIHKFFQEQGFVYVHTPLITGSDCEGAGEM--FQVTTMD 180

Query: 69  QD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +                  KP  L  S +    +  A   +KI+ F   +R        
Sbjct: 181 LNNVPKTEEGKVDYTEDFFGKPTNLTVSGQL-NGETYAMAFKKIYTFGPTFRAENSNTTR 239

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M+    +I+   +              N F+      + +
Sbjct: 240 HAAEFWMIEPEIAFADLADDMELAEAMIKYVIKYV----LENAPEEMNFFNSFVDKGLLD 295

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 N + G                  ++   +  +  +W           +   +  
Sbjct: 296 RLNHVINSEFGRVTYTE-------AIKLLEEHNDKFEYKVSWGVDLQTEHERYLTEQI-F 347

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
                +  YP    A       D +     +     I E+        +      R E+ 
Sbjct: 348 KRPVFVTDYPKEIKAFYMKLNKDGKTVAAMDCLVPGIGEIIGGSQREENYEVLTKRMEE- 406

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   NE    D  F   L      + +G  +GF+R++M +TG  NI +VI  P +
Sbjct: 407 -----LGLNEK---DYQFYLDLRKYGTARHAGFGLGFERMIMYLTGMGNIRDVIPFPRT 457


>gi|322514441|ref|ZP_08067483.1| asparagine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119648|gb|EFX91710.1| asparagine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 467

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 109/357 (30%), Gaps = 45/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLLRTDEGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++   +   ++             + + IT  E 
Sbjct: 245 LAEFWMVEPEFAFATLADNAKLAKDMLKYVFKAVLEERKDDMQFFAKHIDK-DVITRLEN 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F             +  Q D         ++G       +W    S      +      +
Sbjct: 304 F----------IASSFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 406

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  +   N     D  +   L        SG  +GF+RL++ VTG  NI EVI  P 
Sbjct: 407 RMVEMGLNPE---DYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPR 460


>gi|258647926|ref|ZP_05735395.1| asparagine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260851765|gb|EEX71634.1| asparagine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 467

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 111/358 (31%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++  YF E+ F    +  +  S       +   +T+  
Sbjct: 123 AHMRLRTNTFGAVFRIRHNMAMAIHHYFHEHGFFYFHTPIITASDCEGAGQMFQVTTKNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   KP  L  S +   +    +    I+ F   +R        H
Sbjct: 183 YDLKKDENGKIDYSDDFFGKPTSLTVSGQLEGELGATS-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M    + ++   + A    F     + N  ++    T+ + 
Sbjct: 242 LAEFWMIEPEVAFNDITDNMDLAEDFLKYCIQWA----FDNCQDDLNFLNKMIDNTLIDR 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
                  +      +           QA +AG +      W  D+ S      +E +   
Sbjct: 298 LHFVLKNEFVRLSYSEGIEILD----QAVKAGKKFEFPIYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFT-KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +       L+    E+    +   D  + + R ++ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKLNEDGKTVRAMDVLFPQIGEIIGGSEREADYDKLQTRIQE- 410

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +      +   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 411 ------MDLPMKDM-WWYLDTRKYGTCPHSGFGLGFERLILFVTGMQNIRDVIPFPRT 461


>gi|169766764|ref|XP_001817853.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|238483535|ref|XP_002373006.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus flavus NRRL3357]
 gi|83765708|dbj|BAE55851.1| unnamed protein product [Aspergillus oryzae]
 gi|220701056|gb|EED57394.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus flavus NRRL3357]
          Length = 954

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/331 (18%), Positives = 114/331 (34%), Gaps = 27/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ + +  R    E  FIEI +  LQ S   E+    F       ++  +  +
Sbjct: 285 SQSIFRIQSAVGNLFRTALDEQNFIEIHTPKLQGSA-TESGASVFEV-----NYFGRDAF 338

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +AA   +++     +R        H  E+T L+   A E +   M + 
Sbjct: 339 LAQSPQLAKQMAIAADFGRVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEMLEV 398

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           F  +          + +   E        D    L++    D   
Sbjct: 399 LDAVIKNILKGIYGRFRREIETVKQQFPSDDVVWLEETPIIRFSDGIKMLNDSGWRDEE- 457

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                   G  +  DD         L E ++   G +   ILD++P           P D
Sbjct: 458 --------GNPLPVDDDLHTRDEIRLGELVKEKYGTD-YYILDKFPTSARPFYTMPDPDD 508

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            RFT  F+++    E+ +    + DP        +E   +  I  +T    E+++     
Sbjct: 509 NRFTNSFDIFIRGQEIVSGGQRIHDPQML-----EENMRRVGINPDTM---EEYMEGFRW 560

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +R +ML+    NI      
Sbjct: 561 GAPPHAGAGVGLERFLMLLLKLGNIRLASLF 591


>gi|67516065|ref|XP_657918.1| hypothetical protein AN0314.2 [Aspergillus nidulans FGSC A4]
 gi|40746564|gb|EAA65720.1| hypothetical protein AN0314.2 [Aspergillus nidulans FGSC A4]
 gi|259489456|tpe|CBF89742.1| TPA: aspartatyl tRNA synthetase, hypothetical protein (Eurofung)
           [Aspergillus nidulans FGSC A4]
          Length = 956

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 115/331 (34%), Gaps = 27/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ + +  R    E +FIEI +  LQ +   E+    F       ++  +  +
Sbjct: 287 SQSIFRIQSAVCNLFRSALDEQRFIEIHTPKLQGAA-TESGASVFDV-----NYFGRDAF 340

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +AA   +++     +R        H  E+T L+   + E +   M + 
Sbjct: 341 LAQSPQLAKQMAIAADFGRVYEIGAVFRAENSNTHRHLTEYTGLDIEMSIEEHYHEMLEV 400

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           +  +          E +   +        D    L+     D   
Sbjct: 401 LDAVIKNILKGIYTRYRREIEIIKHQFPSEDLVWLDETPIIRFSDGIKMLNESGWRDDE- 459

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                   G  +A D          L E ++     +   +LD++P           P D
Sbjct: 460 --------GNPLAEDKDLGTRDEIRLGELVKEKYKTD-YYVLDKFPVDARPFYAMPDPDD 510

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
           PRFT  F+++    E+ +    + DP        +E   +  I  +T    E+++     
Sbjct: 511 PRFTNSFDMFIRGQEIVSGGQRIHDPHML-----EENMRRVGINPDTM---EEYMEGFRW 562

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +R++ML+    NI      
Sbjct: 563 GAPPHAGAGIGLERMLMLILKLGNIRLASMF 593


>gi|183221108|ref|YP_001839104.1| asparaginyl-tRNA synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911199|ref|YP_001962754.1| asparaginyl-tRNa synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775875|gb|ABZ94176.1| Asparagine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779530|gb|ABZ97828.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase; AsnRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 434

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 114/346 (32%), Gaps = 39/346 (11%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
            +  W R    R+      R+ +  ++RE+F    +  ID+  L  S   E+    FSTE
Sbjct: 119 HRHLWLRSK--RQLAIQRVRSELSFAIREFFRNEGYTLIDTPILTGSI-GESAGTLFSTE 175

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
                      YL  + +   +    A   K++CF   +R  +     H  EF MLE   
Sbjct: 176 YFDLG----QAYLAQTGQLYLETAAFAHS-KVYCFGPTFRAEKSKTKRHLTEFWMLEAET 230

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A    E  +      ++    V  ++               E +   E           T
Sbjct: 231 AFLGQEGNLDLQERFVKSVLTVTVERTI-------------EDLKTLERNPE-------T 270

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
            L   ++P   + Y  A Q          W +  +    + +  + G      +  +P  
Sbjct: 271 LLSYLNKPFPRVEYETAIQILKEAGESIEWGEDINAEREQILTTHFGT--AIFIQNFPRA 328

Query: 245 E-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
             +      P DPR     +L A      +   E++   E+   +EK ++  ++      
Sbjct: 329 IKAFYMKQNPGDPRTVLSADLIAP-----DGIGEIIGGSEREESYEKIVERLQEEGLPPE 383

Query: 304 PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +L          +G  MG +R++  + G  +I E I  P  
Sbjct: 384 DY-AWYLDLRKYGSVPHAGFGMGLERVIAWICGLPHIRECIPFPRM 428


>gi|330920517|ref|XP_003299039.1| hypothetical protein PTT_09950 [Pyrenophora teres f. teres 0-1]
 gi|311327454|gb|EFQ92872.1| hypothetical protein PTT_09950 [Pyrenophora teres f. teres 0-1]
          Length = 551

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 115/341 (33%), Gaps = 30/341 (8%)

Query: 13  DFHYR-RRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQD 70
           D   +  +   + ++ + +  +E+  +  F+ + +   L  +     +       +    
Sbjct: 230 DLRAKINQAIFVIKSGVCALFQEFLSKKGFVLVHTPKILGAASEGGAN-------VFELK 282

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESY 129
           +  +P YL  SP+F  + L+A+  +K+      +R        H  EFT L+     +  
Sbjct: 283 YFGRPAYLAQSPQFYKQMLIASRFQKVMEIGPVFRAENSNTARHLTEFTGLDLEMEFQEN 342

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              +   +  +           F F  +N     E E +        +   + G     P
Sbjct: 343 YHEVMGVLEDLML---------FIFNELNTRYKKETELVRGVYHIDEFKLPESGKVPRIP 393

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA-L 248
            Q    +L    ++ G      D  +    ++L   +      +    LD++P       
Sbjct: 394 FQEGIKMLREAGEELG----DYDDLTTPQEKMLGRLVLEKYNTD-FYTLDQFPLAIRPAY 448

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
               PADP  +  ++++    E+C+    + D          +M++     +      +D
Sbjct: 449 TMPSPADPALSNSYDMFMRGQEICSGAQRIHDS----ALLADQMRKHDPPIDPAGAGTKD 504

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++ C     P  +G   G +R+V    G  NI      P  
Sbjct: 505 YVDCFKYGCPPHAGGGFGLERIVQFWLGLPNIRMCSLFPRD 545


>gi|257082040|ref|ZP_05576401.1| asparaginyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256990070|gb|EEU77372.1| asparaginyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 450

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 117/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L RN I  +  E+F E  FI+IDS  L   +P         
Sbjct: 129 MDHRHLWLRSS--KQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 179

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 180 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 238

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V+E F R    D
Sbjct: 239 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVSEPFKRITYDD 297

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 298 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 341

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 342 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 396

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 397 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 444


>gi|256420050|ref|YP_003120703.1| asparaginyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256034958|gb|ACU58502.1| asparaginyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 479

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 116/365 (31%), Gaps = 41/365 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          R+ +  ++ ++F E  F+ + +  +  S       +        
Sbjct: 120 AHLRFRTNTFGAIFRLRHALAFAVHKFFNEKGFVYLHTPIITASDAEGAGEMFHVTSFDL 179

Query: 60  -RAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                TE    ++ ++  +     L  S +    +L A     I+ F   +R        
Sbjct: 180 KNPPLTESGEINY-KEDFFGRATNLTVSGQL-EGELGAMAFGDIYTFGPTFRAENSNTAR 237

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E+ M      I+     A +              E E     +
Sbjct: 238 HLAEFWMIEPEMAFYDLEENMNLAEAFIKYVLSYALENNREDLEFLAQRLLEEEKQKPQQ 297

Query: 173 AFARYANIDLGTT--------LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
             +    I+            +   +  D        +        ++  +D+ S     
Sbjct: 298 ERSEMGLIEKLEFVLNNEFVRITYTEAIDILKNSKPNKTKKFNYLIEEWGADLQSEHERY 357

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +E +       IL  YP    A       D +  +  ++    I       E++   ++
Sbjct: 358 LVEKH--FKKPVILTDYPKAIKAFYMKQNEDGKTVRAMDILFPGI------GEIVGGSQR 409

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
              ++K +   ++++     +   +L          +G  +GF+RLV+  +G  NI +VI
Sbjct: 410 EENYDKLVTRMEEMHLPVEEM-SWYLDTRRFGSAPHAGFGLGFERLVLFASGMGNIRDVI 468

Query: 344 WTPFS 348
             P +
Sbjct: 469 PFPRT 473


>gi|171780056|ref|ZP_02920960.1| hypothetical protein STRINF_01844 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281404|gb|EDT46839.1| hypothetical protein STRINF_01844 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 448

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 115/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   +  RN I  +  ++F +N FI+ DS  L  +   ++      
Sbjct: 125 MDHRHLWLRSR--KQMAIMQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +       + Q +                  +  + D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQ--GALDRAPQALEILERDVDLLKKYIAEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AIDLLQEHENDEDADYEHLE-----------HGDDFGSPHETWISNYFGV--PTFVINYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +   +  +
Sbjct: 341 ASFKAFYMKPVPDNPERVLCADL-----LAPEGYGEIIGGSVREDDYDTLVAKMDALGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          +G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEY-EFYLDLRKYGSVPHAGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|225677864|gb|EEH16148.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 968

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 109/331 (32%), Gaps = 28/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ + +          FIEI +  LQ S   E+    F        +  +  +
Sbjct: 299 SQSIFRIQSAVSNLFHSALDSQGFIEIHTPKLQGSA-TESGASVFEV-----SYFSRAAF 352

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A + +     + 
Sbjct: 353 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIDEHYHEALEV 412

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           +  +          E +   +        D    L++        
Sbjct: 413 IDSVLKEIFKGIYVRYRREVDIIKHQFPHEDLVWLDKTPVIRFSDGIKLLNDSGW----- 467

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
                ++ G  +  ++         L E I+     +   ILD+YP        +  P +
Sbjct: 468 -----RRDGEELPTNEDLGTRDEMRLGELIKEKYHTD-YYILDKYPRVARPFYAMEDPEN 521

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
           P FT  F+++    E+ +    + D      R       +    +      ED+L     
Sbjct: 522 PEFTNSFDIFVRGQEIVSGGQRIHDEKILEKR------MRDAGIDPLTM--EDYLEGFRW 573

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +RLVML+    NI      
Sbjct: 574 GAPPHAGAGIGLERLVMLILKLGNIRLASMF 604


>gi|229115695|ref|ZP_04245100.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228667837|gb|EEL23274.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 432

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 104/339 (30%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       +  +  S  +Y  EN FI I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKATLAQSFSDYLTENDFIRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           K  YL  SP+F  +  +A G E++F  A  +R        H  E+  L+           
Sbjct: 178 KEAYLAQSPQFYKQMTVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIDDFHE 237

Query: 133 MKD-CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVGETC--------------------EKELQQLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 T-LSEAQEILKSKYRKESPIGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 336 PNNENPSITDSFDLLYKGLEITSGAQRIHNYDLLLASFKE-----KGLHPEKFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|226330674|ref|ZP_03806192.1| hypothetical protein PROPEN_04594 [Proteus penneri ATCC 35198]
 gi|225201469|gb|EEG83823.1| hypothetical protein PROPEN_04594 [Proteus penneri ATCC 35198]
          Length = 466

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 107/365 (29%), Gaps = 59/365 (16%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R R  L       R+ +  +L  +F E  F  + +  L  +   E     F    + 
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTP-LITAADTEGAGEMFRVSTLD 183

Query: 69  QD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
            +                  +  +L  S + + +   +A   K++ F   +R        
Sbjct: 184 MNNLPRTDKGDVDFSEDFFGREAFLTVSGQLNGETYASA-LSKVYTFGPTFRAENSNTSR 242

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A      +      +++                        E     E
Sbjct: 243 HLAEFWMVEPEVAFADLNDIAALAEKMLKYTFAAVLA----------------ERKDDME 286

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLY-----LQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            FA+  + D  T L+N    D   +         +  G +  +   W    S      + 
Sbjct: 287 FFAQRVDKDAITRLENFITSDFAQIDYTDAVTVLENCGEKFENPVYWGVDLSSEHERYLA 346

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                    +   YP    A       D +             L     E++   ++  R
Sbjct: 347 EKHFKAPVVVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREER 399

Query: 288 FEKEMQEKKKIYNETYPIDEDF--LACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
            +       K  +E     ED+     L        SG  +GF+RLV  VTG  N+ EVI
Sbjct: 400 LD----MFDKRLDEMGMSKEDYWWYRDLRRYGTVPHSGFGLGFERLVAYVTGVANVREVI 455

Query: 344 WTPFS 348
             P +
Sbjct: 456 PFPRT 460


>gi|114047699|ref|YP_738249.1| asparaginyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|122944635|sp|Q0HUL3|SYN_SHESR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|113889141|gb|ABI43192.1| asparaginyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 466

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 111/356 (31%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  +       RN +  ++  ++ EN F+ + +  +  S       +   ST  +
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTLDM 184

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +   +      +++ A +    +    +  +   F++    TV E 
Sbjct: 244 LAEFWMVEPEVAFATLSDIASLAEGMLKYAFDAVLAE----RMDDLQFFAQHVDKTVIER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + + D           D        Q+ G       +W    S      +       
Sbjct: 300 LQSFVSSDFAQV-------DYTDAVEILQKCGREFEFPVSWGIDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDM 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++       D  +   L        +G  +GF+RLV  VTG +NI +VI  P 
Sbjct: 406 RLEEMDL--NKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPR 459


>gi|330832585|ref|YP_004401410.1| asparaginyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306808|gb|AEB81224.1| asparaginyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 448

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 63/348 (18%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++      RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  +P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGQPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +               +   +AE F R A  D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRY-IAEPFKRVAYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            T L   +  +                      D F       I    G+   T +  YP
Sbjct: 295 ITLLQEHEADEDTD------------YEHIEHGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDNYDALVAKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|229096717|ref|ZP_04227688.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228686923|gb|EEL40830.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 432

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 105/339 (30%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       +  +  S  +Y  EN FI I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKATLAQSFSDYLAENDFIRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+           
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIDDFHE 237

Query: 133 MKD-CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRHMFQQVGETC--------------------EKELQQLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 T-LSEAQEILKSKYRKESPIGDLDTEGEKLLGKYVKATYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 336 PNKENPTITDSFDLLYKGLEITSGAQRIHNYDLLLASFKE-----KGLHLEKFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|223947835|gb|ACN28001.1| unknown [Zea mays]
          Length = 546

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 48/339 (14%), Positives = 105/339 (30%), Gaps = 45/339 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY--SPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  +++  R++ +   F+ I +  L    S G           +    +  +P 
Sbjct: 238 QAIFRIQCQVENKFRDFLLSKNFVGIHTPKLISGSSEGGAA--------VFKLLYNGQPA 289

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  ++ G E++F     +R        H  EF  L+     + +   + D
Sbjct: 290 CLAQSPQLYKQMAISGGFERVFEVGPVFRAENSNTHRHLCEFVGLDAEMEIKEHYFEVCD 349

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +  +      +    +  + N     E +   +   +                   
Sbjct: 350 IIDGLFVSIFKHLSENCKKELESINRQYPFEPLKYLDKTLKLTY---------------E 394

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
                 ++AG  +      +    + L   +      +   IL RYP             
Sbjct: 395 EGIQMLKEAGTEIEPMGDLNTEAEKKLGRLVREKYDTD-FFILYRYPLAVRPFYTMPCYD 453

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFL 310
           +P +T  F+++    E+ +    +  P     R  +              ID      ++
Sbjct: 454 NPAYTNSFDVFIRGEEIISGAQRIHTPELLAKRATE------------CGIDVSTISAYI 501

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +P   G  +G +R+VML    NNI +    P  
Sbjct: 502 ESFSYGVPPHGGFGVGLERVVMLFCALNNIRKTSLFPRD 540


>gi|226505476|ref|NP_001149817.1| LOC100283444 [Zea mays]
 gi|195634857|gb|ACG36897.1| aspartyl-tRNA synthetase [Zea mays]
          Length = 546

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 48/339 (14%), Positives = 105/339 (30%), Gaps = 45/339 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY--SPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  +++  R++ +   F+ I +  L    S G           +    +  +P 
Sbjct: 238 QAIFRIQCQVENKFRDFLLSKNFVGIHTPKLISGSSEGGAA--------VFKLLYNGQPA 289

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  ++ G E++F     +R        H  EF  L+     + +   + D
Sbjct: 290 CLAQSPQLYKQMAISGGFERVFEVGPVFRAENSNTHRHLCEFVGLDAEMEIKEHYFEVCD 349

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +  +      +    +  + N     E +   +   +                   
Sbjct: 350 IIDGLFVSIFKHLSENCKKELESINRQYPFEPLKYLDKTLKLTY---------------E 394

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
                 ++AG  +      +    + L   +      +   IL RYP             
Sbjct: 395 EGIQMLKEAGTEIEPMGDLNTEAEKKLGRLVREKYDTD-FFILYRYPLAVRPFYTMPCYD 453

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFL 310
           +P +T  F+++    E+ +    +  P     R  +              ID      ++
Sbjct: 454 NPAYTNSFDVFIRGEEIISGAQRIHTPELLAKRATE------------CGIDVSTISAYI 501

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +P   G  +G +R+VML    NNI +    P  
Sbjct: 502 ESFSYGVPPHGGFGVGLERVVMLFCALNNIRKTSLFPRD 540


>gi|134114419|ref|XP_774138.1| hypothetical protein CNBG4380 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256771|gb|EAL19491.1| hypothetical protein CNBG4380 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 884

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/331 (16%), Positives = 110/331 (33%), Gaps = 40/331 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H   +     R  +    R+   +  F+EI++  LQ S   E+    F       ++  
Sbjct: 229 RHPTAQAIFKIRAKVLKVFRDTLDDLGFLEINTPKLQPSA-TESGAEVFRV-----NYFG 282

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           +  +L  SP+   +  ++A   +++     +R        H  E+T L+   A +     
Sbjct: 283 RKAFLAQSPQLMKQMAISADFRRVYEIGPVFRAENSNTHRHLTEYTGLDIEMAIQKEYHE 342

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +   ++I+      A +++                 T       +   D    L+     
Sbjct: 343 VFRILDIVLRNIFNALKEMK----------------TELNRIREFFPSDDFQFLEETPII 386

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                    +  G  V  +D  +    R+    I+  LG +   ++D++P          
Sbjct: 387 PFQEAVQMLRDDGRDVEEEDLHTPDEIRLGE-LIKEKLGTD-YYVIDKFPVSARPFYTAN 444

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE--DFL 310
                 T  F+++    E+C     + DP + R         K+   NE    DE  ++L
Sbjct: 445 DGK--ITNSFDMFIRGQEVCTGGQRINDPKKLRE------SMKESGINE----DEMAEYL 492

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
                 MP   G  +G +R+V       ++ 
Sbjct: 493 QAFDWGMPPHGGAGLGVERIVTFFLNLPDVR 523


>gi|302345865|ref|YP_003814218.1| asparagine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302149547|gb|ADK95809.1| asparagine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 463

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 106/350 (30%), Gaps = 33/350 (9%)

Query: 13  DFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
               R   F      R+ +  ++ +YF E+ F    +  +  S      ++   +T  + 
Sbjct: 121 HMRLRTNTFGAVFRIRHNMAIAIHQYFHEHGFYYFHTPLITGSDAEGAGNMFQVTTLDLD 180

Query: 69  Q-----------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPE 116
           +           D   K   L  S +   +    A    I+ F   +R        H  E
Sbjct: 181 RVAKGGEVDYSADFFGKRTNLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPRHLAE 239

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           F M+E   A    ++LM    + I+     A +              +       E  AR
Sbjct: 240 FWMVEPEVAFIDKDELMDLEEDFIKYCVRWALENCKDDLEFLNKMIDK-------ELIAR 292

Query: 177 YANIDLGTTLDNPDQPDRHLL-YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
              +               +L    A              D+ S      +E +      
Sbjct: 293 LEGVLKEDFARLTYTEGFEILQKAAADGVKFEFPITHWGMDLSSEHERYLVEEH--FKRP 350

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            I+  YP+   +       D +  +  ++    I       E++    +   +EK ++E 
Sbjct: 351 VIMTDYPSEIKSFYMKKNEDGKTMQGTDVLFPRI------GEIIGGSVREESYEKLVEEI 404

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +    +    D              G  +GF+RL++ VTG  NI +VI  
Sbjct: 405 ESRGMKRDIYDWYLDTRKYGTCPHGGFGLGFERLILFVTGMQNIRDVIPF 454


>gi|255972158|ref|ZP_05422744.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256617171|ref|ZP_05474017.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256956653|ref|ZP_05560824.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300860825|ref|ZP_07106912.1| asparagine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|255963176|gb|EET95652.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256596698|gb|EEU15874.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256947149|gb|EEU63781.1| asparaginyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300849864|gb|EFK77614.1| asparagine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
          Length = 444

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 117/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L RN I  +  E+F E  FI+IDS  L   +P         
Sbjct: 123 MDHRHLWLRSS--KQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 173

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 174 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 232

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V+E F R    D
Sbjct: 233 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVSEPFKRITYDD 291

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 292 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 335

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 336 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 390

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 391 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 438


>gi|212709816|ref|ZP_03317944.1| hypothetical protein PROVALCAL_00864 [Providencia alcalifaciens DSM
           30120]
 gi|212687627|gb|EEB47155.1| hypothetical protein PROVALCAL_00864 [Providencia alcalifaciens DSM
           30120]
          Length = 466

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 62/357 (17%), Positives = 112/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDY 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 NNLPRNDKGEVDFSEDFFGREAFLTVSGQLNGEAYATA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  + + +      +++ A + A     + +  +   F+E     V   
Sbjct: 244 LAEFWMLEPEVAFANLDDIAGLAEKMLKYAFKAA----LTERRDDLEFFAERVDKDVINR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ N D           D        +  G +  +   W    S      +       
Sbjct: 300 LERFVNSDFAQV-------DYTDAIKILETCGQKFENPVYWGVDMSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R ++   
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDRLDA 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +++       D  +   L        SG  +GF+RL+  VTG +N+ EVI  P +
Sbjct: 406 RLEEMG--MNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVSNVREVIPFPRT 460


>gi|58269164|ref|XP_571738.1| aspartate--tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57227974|gb|AAW44431.1| aspartate--tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 884

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 109/329 (33%), Gaps = 36/329 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H   +     R  +    R+   +  F+EI++  LQ S   E+    F       ++  
Sbjct: 229 RHPTAQAIFKIRAKVLKVFRDTLDDLGFLEINTPKLQPSA-TESGAEVFRV-----NYFG 282

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           +  +L  SP+   +  ++A   +++     +R        H  E+T L+   A +     
Sbjct: 283 RKAFLAQSPQLMKQMAISADFRRVYEIGPVFRAENSNTHRHLTEYTGLDIEMAIQKEYHE 342

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +   ++I+      A +++                 T       +   D    L+     
Sbjct: 343 VFRILDIVLRNIFNALKEMK----------------TELNRIREFFPSDDFQFLEETPII 386

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                    +  G  V  +D  +    R+    I+  LG +   ++D++P          
Sbjct: 387 PFQEAVQMLRDDGRDVEEEDLHTPDEIRLGE-LIKEKLGTD-YYVIDKFPVSARPFYTAN 444

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
                 T  F+++    E+C     + DP E R   ++      +I  +      ++L  
Sbjct: 445 DGK--ITNSFDMFIRGQEVCTGGQRINDPKELRESMKE-----SRINEDEM---AEYLQA 494

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
               MP   G  +G +R+V       ++ 
Sbjct: 495 FDWGMPPHGGAGLGVERIVTFFLNLPDVR 523


>gi|170079063|ref|YP_001735701.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|226695303|sp|B1XKH1|SYN_SYNP2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|169886732|gb|ACB00446.1| asparaginyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 460

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 101/345 (29%), Gaps = 36/345 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI-------RAFSTELIIQ 69
             +  RN   +++ ++F E  FI   +  +  S      E              T+    
Sbjct: 130 AVMRVRNACATAIHQFFQERGFIWAHTPIITASDCEGAGEMFAVTNFDLANPKRTKEGAV 189

Query: 70  DH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYR 124
           D+      +P YL  S +    +++A   + ++ F   +R        H  EF M+E   
Sbjct: 190 DYAEDFFGRPAYLTVSGQLEA-EVMAMAFKDVYTFGPTFRAENSNTSRHLAEFWMVEPEM 248

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A              +R   +            +   F++    +V          +   
Sbjct: 249 AFCDIVGDQDLAEEFLRYIFKYV----LEACPEDMEFFNKRIDNSVLATAQNIIENEFAR 304

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                            +++         W           +  +L      +   YP  
Sbjct: 305 ITYTE-------AIALLEKSNKTFEFPVEWGIDLQSEHERYLAEDLFKKPLIVS-NYPKD 356

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
             A       D +             L     E++   ++  R +   +  +++  E   
Sbjct: 357 IKAFYMRLNDDQKTVAAM------DVLAPKIGEIIGGSQREERLDVLERRIQEMNIEAAD 410

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +L          +G  +GF+RLV  +TG  NI +VI  P +
Sbjct: 411 L-WWYLDLRRFGTVPHAGFGLGFERLVQFMTGMGNIRDVIPFPRT 454


>gi|153809093|ref|ZP_01961761.1| hypothetical protein BACCAC_03403 [Bacteroides caccae ATCC 43185]
 gi|149128426|gb|EDM19645.1| hypothetical protein BACCAC_03403 [Bacteroides caccae ATCC 43185]
          Length = 467

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 107/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE--------THI 59
            H R R          R+ +  ++ ++F +  F    +  +  S              ++
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHDRGFFYFHTPIITASDCEGAGQMFQVTTMNL 182

Query: 60  RAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                +           +     L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDERGSISYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A            + F +         
Sbjct: 242 LAEFWMIEPEVAFNDIADNMDLAEEFIKYCVKWALDNCADDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +     +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLQGVLKDNFVRLPYTDGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
            C  IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KCPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSERESDYDKLMTRIEEM 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG +NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRT 461


>gi|120601052|ref|YP_965452.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166231664|sp|A1V9B8|SYN_DESVV RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|120561281|gb|ABM27025.1| asparaginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 461

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 105/355 (29%), Gaps = 40/355 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
            H R R          R+    ++ E++ E  F  + +  L  S       +   +T   
Sbjct: 121 AHLRARTNKYGAAFRIRSEAAFAIHEFYRERGFFYVHTPILTGSDCEGAGEMFRVTTLPV 180

Query: 65  ----ELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                    +      +     L  S +   + L      K++ F   +R        H 
Sbjct: 181 EGSPTPASGNRYENDFFGKECNLTVSGQLEAETLALG-LGKVYTFGPTFRAENSNTPRHA 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E+ M    ++ R                + + F+     T+ E  
Sbjct: 240 AEFWMIEPEVAFADLEEDMNLAEDMTRTVVRRI----LDRCAADLDLFNRFVDTTLVERL 295

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            + A+                       ++G +  +  ++           +        
Sbjct: 296 RQIADEPFARCSYTE-------AIELLLKSGKKFEYPVSFGLDLQTEHERYLAEEH-FGK 347

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YP    A       D R     ++    I       EL+   ++  R +     
Sbjct: 348 PVIVYNYPKEIKAFYMRLNDDGRTVAAMDVLVPRI------GELIGGSQREERLDVLEAR 401

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ++          +L          +G  MGF+RL+ML+TG  NI +VI  P +
Sbjct: 402 INEMGQNLEDY-WWYLDLRRFGSVPHAGFGMGFERLLMLLTGITNIRDVIPFPRT 455


>gi|239906653|ref|YP_002953394.1| asparaginyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239796519|dbj|BAH75508.1| asparaginyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 462

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 62/355 (17%), Positives = 110/355 (30%), Gaps = 41/355 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-------------YSPGN 55
            H R R       L  R  +   + +YF +  F  + +  +               + G 
Sbjct: 123 AHLRPRTNKYGAMLRIRAALAHGIHDYFAKEGFALVHTPVITGSDCEGAGEMFRVTTLGP 182

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
           E        E + QD   K   L  S + S + L  A   +++ F   +R        H 
Sbjct: 183 EAAALP-VAERLSQDFFGKEAMLTVSGQLSAEPLACA-LGRVYTFGPTFRAEHSDTSRHA 240

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF MLE   A    E  M    +++     +   +       +   F++    T+    
Sbjct: 241 AEFWMLEPEMAFADLEDNMNLAESLVTHLVRLVLAECAE----DFGLFAKFVDPTLP--- 293

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
              A ++          P    + +               +D+ S       E +     
Sbjct: 294 ---ATLENLLAEPFVRLPYVEAVDILTSCKKAFQYPVAFGADLQSEHERYLAEEH--FKR 348

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YP    A       D +     ++    I       EL+    +  R ++    
Sbjct: 349 PVIVYDYPKDIKAFYMRQNDDGKTVGAMDVLVPGI------GELVGGSAREERLDRLEAR 402

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ++          +L          +G  +GF+RLVMLVTG  NI +V+  P +
Sbjct: 403 IAELGLPLEAY-WWYLDTRRFGTVPHAGFGLGFERLVMLVTGVTNIRDVMAFPRT 456


>gi|224133182|ref|XP_002327980.1| predicted protein [Populus trichocarpa]
 gi|222837389|gb|EEE75768.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 114/368 (30%), Gaps = 54/368 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQY---------------SP 53
            H R R          RN +  +  ++F EN F+ + S  +                  P
Sbjct: 222 AHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTTLIP 281

Query: 54  GNETHIRAFS-----TELI----IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
           G++    +       T+       QD   KP +L  S + + +    A    ++ F   +
Sbjct: 282 GSQEAANSPVDGIPKTKDGLIDWSQDFFGKPAFLTVSGQLNAETYATA-LSDVYTFGPTF 340

Query: 105 RNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R        H  EF M+E   A       M      ++                +   F+
Sbjct: 341 RAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYVVRHI----LENCKEDMEFFN 396

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
                 + +  +     D           D   L L+A++   +      W         
Sbjct: 397 TWIEKGIIDRLSDVVEKDFVQLTY----TDAIELLLKAKK---KFEFPLEWGCDLQSEHE 449

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             I   +   C  I+  YP    A       D +     ++    +       EL+   +
Sbjct: 450 RYITEEVFGGCPVIIRDYPKDIKAFYMRQNDDGKTVAAMDMLVPRV------GELIGGSQ 503

Query: 284 QRHRFE--KEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +  R E  ++  ++ K+  E++     +L          +G  +GF+RLV   TG +NI 
Sbjct: 504 REERLEYIEDRLDELKLNKESF---WWYLDLRRYGSVPHAGFGLGFERLVQFATGIDNIR 560

Query: 341 EVIWTPFS 348
           + I  P  
Sbjct: 561 DAIPFPRV 568


>gi|282878146|ref|ZP_06286943.1| asparagine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299724|gb|EFA92096.1| asparagine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 489

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 112/361 (31%), Gaps = 42/361 (11%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
            +  H R R       +  R+ +  ++ +YF E+ F    +  +  S       +  F  
Sbjct: 142 RQHAHMRLRTNTFGAVMRIRHNMAFAIHQYFHEHGFFYFHTPLITASDAEGAGEM--FQV 199

Query: 65  ELIIQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
                + ++K            +     L  S +   +    A   +I+ F   +R    
Sbjct: 200 TTQNLNDLKKGEDGKVSYEDDFFGKMTSLTVSGQLEGELGATA-LGQIYTFGPTFRAENS 258

Query: 110 -GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A  +   LM    + I+     A          + +  +     
Sbjct: 259 NTPRHLAEFWMIEPEIAFIALPDLMDLEEDFIKYCVRWA----LDNCKDDLDFLNSMIDK 314

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T+ E        D           D   +  +A   G +     +W    +      +  
Sbjct: 315 TLLERLQGVLKNDFVRLTY----TDGIKILEEAAANGHKFEFPVSWGMDLASEHERFLVE 370

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +       I+  YP    A       D +  +  ++    I       E++    +    
Sbjct: 371 HHFKKPV-IMYDYPKEIKAFYMKINEDGKTVQGTDVLFPQI------GEIIGGSVREESL 423

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           EK   E ++ +     +   +L           G  +GF+RL++ VTG  NI +VI  P 
Sbjct: 424 EKLTSEIERRHIPMKDM-WWYLDTRKYGTCPHGGFGLGFERLILFVTGMQNIRDVIPFPR 482

Query: 348 S 348
           +
Sbjct: 483 T 483


>gi|149377737|ref|ZP_01895471.1| lysyl-tRNA synthetase (class II) [Marinobacter algicola DG893]
 gi|149357963|gb|EDM46451.1| lysyl-tRNA synthetase (class II) [Marinobacter algicola DG893]
          Length = 245

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 123/266 (46%), Gaps = 24/266 (9%)

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            K++LAAG   I+  A  +R+GE G  H PEF++LEWYR   +   LM++   ++     
Sbjct: 1   MKRMLAAGSGPIYQIARVFRDGEFGRRHNPEFSLLEWYRPGFTDVDLMEEVSELVCGWLG 60

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                              P  +   +AF R+A ID      +            +Q  G
Sbjct: 61  C----------------EPPRTMDYRDAFLRFAGIDPFLAGKDELSERCEQWMESSQLDG 104

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFEL 264
                  +  D    ++  ++EP L       +  YP  ++ALA +      R   RFEL
Sbjct: 105 F------SRDDYLDLLMSYQVEPALADVGPVFVTGYPESQAALARVSEQSGVRQAHRFEL 158

Query: 265 YACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIA 323
           Y   +ELCN   EL DP EQR RFE + Q ++++     PID+ F+A L + +P  SG+A
Sbjct: 159 YVGGVELCNGYWELTDPDEQRRRFEADNQARRRVGKLEMPIDQAFMAALDSGVPDCSGVA 218

Query: 324 MGFDRLVMLVTGANNINEVIWTPFSQ 349
           +G DRL+ML  G + +  VI  P  +
Sbjct: 219 LGLDRLLMLKLGLDELAGVIAFPADR 244


>gi|116334579|ref|YP_796106.1| asparaginyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116099926|gb|ABJ65075.1| asparaginyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 463

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 110/359 (30%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ +Y  E+ F  +++  +  S       +  F    +
Sbjct: 122 AHLRPRTNTFYAVFRIRSLAAFAIHQYLQEHGFTYVNTPIITSSDSEGAGEM--FRVTTL 179

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGC 111
             +++ K            +     L  S +   +    A    ++ F  A+R       
Sbjct: 180 DMNNLPKTEDGRVDDHEDFFKKETNLTVSGQLPVEAFALA-LRNVYTFGPAFRAENSHTS 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPEYITV 170
            H  EF M+E   A    +  + +   +++   +            ++     +      
Sbjct: 239 RHASEFWMIEPEMAFADLQDTINEAEGLLKYVVQYLLDHAQDELAFLDSAVDDDLLNRLH 298

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                ++A I     +             + ++A +      +W           +   +
Sbjct: 299 QTCDEKFAQITYTQAI------------EELKKAPVDFDVPVSWGLDLQAEHERYLCEQV 346

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  L  YP    A       D +     +L    I              QR   + 
Sbjct: 347 YKRPT-FLTDYPKEIKAFYMRDNEDGKTVAAADLLVPRIGELIGGS-------QREERQA 398

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++ +K K YN      + +L          SG  +GF+RL+M VTG  NI +VI  P +
Sbjct: 399 QLAQKIKDYNLPPEEYQWYLDLRKYGETPHSGYGIGFERLLMYVTGMENIRDVIPYPRT 457


>gi|223043225|ref|ZP_03613272.1| asparaginyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443436|gb|EEE49534.1| asparaginyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 430

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 108/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F +N F +ID   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEIIRATYEFFNDNGFTKIDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   ++F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDQDAFLSQSGQLYMEAAAMAH-GRVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      E   +  + D
Sbjct: 224 PEMAFTNHAESLEVQEQYVTHVVQSVLKNC--------------------ELELKALDRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +    +   D  W + F       I  +   +    +  Y
Sbjct: 264 TTKLEKVATPFPRISYDDAIEFLKEQGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P +       +L A     E+    + + D      R ++      ++
Sbjct: 322 PTQIKPFYMQPNPDNEDTVLCADLIAPEGYGEIIGGSERINDLDLLEQRIKE-----HEL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E+Y    D           SG  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEESYSYYLDLRR--YGSVPHSGFGLGLERTVAWISGVEHVRETSPFPRL 424


>gi|212550927|ref|YP_002309244.1| asparaginyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|259511566|sp|B6YRL1|SYN_AZOPC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|212549165|dbj|BAG83833.1| asparaginyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 464

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 104/359 (28%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            + R R       L  R+ +  ++ +YF +  F    +  +  S           T+L I
Sbjct: 123 AYLRPRTNTFGCILRIRHHLAYAIHKYFNKQGFFYFHTPIITSSDAEGAGSMFQITDLDI 182

Query: 69  QD---------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            +            +  +     L  S +   +    A    I+ F   +R  +     H
Sbjct: 183 ANCPKTKDGEVDYTRDFFGCSTNLTVSGQLEGELGALA-LGGIYTFGPIFRAEKSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M    + ++           S+    C    E    T    
Sbjct: 242 LAEFWMIEPEIAFYDINDNMDLAEDFLKYI--------ISYAMKYCKDDIEFLNNTYNNE 293

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N       +   +          +Q+         W           +       
Sbjct: 294 LIEHLNF---VLSNRFVRLAYSEGIRILEQSNEEFEFPIYWGIDLQSEHERYLVEKY-FK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
           C  I+  YP    +       D R  +  ++    I E+    +   D  +   R ++  
Sbjct: 350 CPVIMTNYPKDIKSFYMKQNDDGRTVRGMDVLFPRIGEIIGGSERESDHQKLLKRIKELN 409

Query: 293 QEKKKIYNETYPID--EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                       +D    +L          SG  +GF+RLV+ VTG  NI +VI  P +
Sbjct: 410 ----------MSMDNLWWYLDTRRFGTAPHSGFGLGFERLVLFVTGMQNIRDVIPFPRT 458


>gi|328875378|gb|EGG23743.1| aspartyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 567

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 104/332 (31%), Gaps = 32/332 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ +    REY V   F+EI S  +  S  +E+    F        +     +L
Sbjct: 260 QAIFKLQSAVGLLFREYLVGRDFVEIHSPKMISSA-SESGASVFK-----LGYFDTHAFL 313

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+F  +  + A  E++F     +R        H  EF  L+       +   + D +
Sbjct: 314 AQSPQFYKQMAICADMERVFEIGPVFRAENSFTHRHLTEFVGLDIEMTFREHYHEVLDEL 373

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +  +     +  F  +    +     E         R+                    
Sbjct: 374 DNLMTSIFEGLETRFKKEIDIISQQYGYEPFKWTRPSPRFT---------------FDQA 418

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
               ++ G  V  +D  +    + L + I+   G++   I   Y           P +  
Sbjct: 419 AAFLKEIGEEVVDND-INTSQEKRLGKIIKEKYGVDFYIIDKFYRTARPFYTMPDPNNVL 477

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
               ++L+    E+C+    + D +             K        I + ++       
Sbjct: 478 LANAYDLFMRGEEICSGAQRIHDAVMLEE-------SAKNHGINIQSI-QAYIDAFKFGA 529

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +G  +G +R+VML  G  NI +    P  
Sbjct: 530 SPHAGGGVGLERVVMLYMGLGNIRKTSLFPRD 561


>gi|256961324|ref|ZP_05565495.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256951820|gb|EEU68452.1| asparaginyl-tRNA synthetase [Enterococcus faecalis Merz96]
          Length = 444

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 117/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L RN I  +  E+F E  FI+IDS  L   +P         
Sbjct: 123 MDHRHLWLRSS--KQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 173

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 174 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 232

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V+E F R    D
Sbjct: 233 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVSEPFKRITYDD 291

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 292 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 335

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 336 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 390

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 391 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 438


>gi|170769276|ref|ZP_02903729.1| asparagine tRNA synthetase [Escherichia albertii TW07627]
 gi|170121928|gb|EDS90859.1| asparagine tRNA synthetase [Escherichia albertii TW07627]
          Length = 466

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAISR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LERFIEADFAQV-------DYTDAVTILENCGKKFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R  +  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LKKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|150014968|ref|YP_001307222.1| asparaginyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|226695284|sp|A6LPI6|SYN_CLOB8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|149901433|gb|ABR32266.1| asparaginyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 464

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 109/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRA 61
            H R R          R++   ++ ++F +  F+   +  +  S      E    T +  
Sbjct: 123 AHLRPRSNAFAATFRVRSVAAYAIHKFFQDQNFVYTHTPIITGSDCEGAGEMFRVTTLDP 182

Query: 62  FSTELIIQDH---IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
             T  + +D      K  +     L  S +    +  A     I+ F   +R        
Sbjct: 183 -KTPELSKDGSVDFSKDFFGKETNLTVSGQL-NAECFALAFRNIYTFGPTFRAENSNTTR 240

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +  M+   N+++   +    +           F++     + E
Sbjct: 241 HAAEFWMIEPEIAFADLQDDMELAENMLKYVIKYVMDECPE----ELEFFNQFVDKGLLE 296

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 + D                    Q+ G +  +D +W           +      
Sbjct: 297 RLNHVVSSDFAKVTYTE-------AVEILQKCGKKFDYDVSWGIDLQTEHERYLTEEHFK 349

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
                +  YP    A       D +     +L    I       E++   ++  R +   
Sbjct: 350 KPL-FVTDYPKDIKAFYMRLNDDGKTVAATDLLVPGI------GEIIGGSQREERLDVLK 402

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               ++          +L        + +G  +GF+RL+M +TG  NI +V+  P +
Sbjct: 403 DRMTELNLSEDDY-WWYLELRKYGETKHAGFGLGFERLIMYITGMTNIRDVVPFPRT 458


>gi|323343343|ref|ZP_08083570.1| asparagine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095162|gb|EFZ37736.1| asparagine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 464

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 104/361 (28%), Gaps = 42/361 (11%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
            +  H R R          R+ +  ++  YF E+ F    +  +  S       +  F  
Sbjct: 117 RQHAHMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFFYFHTPIITASDAEGAGEM--FQV 174

Query: 65  ELIIQDHI----------RKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
                  +              +     L  S +   +    A   +I+ F   +R    
Sbjct: 175 TTKNLYDLKKDENGKIIYDDDFFGKMTSLTVSGQLEGELGATA-LGQIYTFGPTFRAENS 233

Query: 110 -GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A      LM    + I+   + A          +    +     
Sbjct: 234 NTPRHLAEFWMIEPEVAFIDLNDLMDLEEDFIKYCVKWA----LDNCKDDLEFLNNMIDK 289

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            + E        D                  +A + G +     +W    +      +  
Sbjct: 290 GLIERLQGILKDDFVRLPYTEGINILE----EAVRQGHKFEFPVSWGTDLASEHERYLVE 345

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                   I+  YP    A       D +  +  ++    I       E++    +   +
Sbjct: 346 EHFKKPV-IMTDYPKDIKAFYMKMNEDGKTVQGTDVLFPQI------GEIIGGSVREEDY 398

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +K + E K+       +   +L           G  +GF+RL++ VTG  NI +VI  P 
Sbjct: 399 DKLLGEIKRRDIPMKDM-WWYLETRKYGTCPHGGFGLGFERLILFVTGMQNIRDVIPFPR 457

Query: 348 S 348
           +
Sbjct: 458 T 458


>gi|257416582|ref|ZP_05593576.1| asparaginyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257421983|ref|ZP_05598973.1| asparaginyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257158410|gb|EEU88370.1| asparaginyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|257163807|gb|EEU93767.1| asparaginyl-tRNA synthetase [Enterococcus faecalis X98]
          Length = 444

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 117/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L RN I  +  E+F E  FI+IDS  L   +P         
Sbjct: 123 MDHRHLWLRSS--KQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 173

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 174 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 232

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V+E F R    D
Sbjct: 233 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVSEPFKRITYDD 291

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 292 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 335

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 336 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 390

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 391 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 438


>gi|242803977|ref|XP_002484282.1| aspartyl-tRNA synthetase, cytoplasmic [Talaromyces stipitatus ATCC
           10500]
 gi|218717627|gb|EED17048.1| aspartyl-tRNA synthetase, cytoplasmic [Talaromyces stipitatus ATCC
           10500]
          Length = 946

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 114/330 (34%), Gaps = 27/330 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ + +  R    E  FIEI +  LQ S   E+    F       ++  +P +L
Sbjct: 279 QAIFRIQSAVGNLWRAALDERGFIEIHTPKLQGSA-TESGASVFE-----LNYFGRPAFL 332

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+ + +  +A+  E+++     +R        H  E+T L+   A + +   M + +
Sbjct: 333 AQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIDEHYHEMLETI 392

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +           +  +            + +AE        +    L+          
Sbjct: 393 DAVLRHIITGIYSKYRREVEAVKHQFPSNDVVLAEKTPVIPFQEAVKLLNESGWRTED-- 450

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
                  G  V  D+  +      L E ++   G +   I+D++P             +P
Sbjct: 451 -------GKEVPDDEDLATRDEIRLGEVVKEKYGTD-YYIIDKFPVSARPFYTMPDANNP 502

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
            +T  F+++    E+ +    + DP        ++  +K  I        ED+L      
Sbjct: 503 GYTNSFDIFVRGQEIVSGGQRIHDPSML-----EDNMKKVGIKPSDM---EDYLEGFRWG 554

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            P  +G  +G +R VML+    NI      
Sbjct: 555 APPHAGAGVGLERFVMLLLKLGNIRLASLF 584


>gi|255975222|ref|ZP_05425808.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256763066|ref|ZP_05503646.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256963547|ref|ZP_05567718.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257079579|ref|ZP_05573940.1| asparaginyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257087403|ref|ZP_05581764.1| asparaginyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|257090537|ref|ZP_05584898.1| asparaginyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257419830|ref|ZP_05596824.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|294779456|ref|ZP_06744854.1| asparagine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|255968094|gb|EET98716.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256684317|gb|EEU24012.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256954043|gb|EEU70675.1| asparaginyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256987609|gb|EEU74911.1| asparaginyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256995433|gb|EEU82735.1| asparaginyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256999349|gb|EEU85869.1| asparaginyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257161658|gb|EEU91618.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|294453462|gb|EFG21866.1| asparagine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|323481329|gb|ADX80768.1| asparaginyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 444

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 117/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L RN I  +  E+F E  FI+IDS  L   +P         
Sbjct: 123 MDHRHLWLRSS--KQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 173

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 174 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 232

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V+E F R    D
Sbjct: 233 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVSEPFKRITYDD 291

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 292 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 335

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 336 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 390

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 391 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 438


>gi|149174859|ref|ZP_01853483.1| asparaginyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148846196|gb|EDL60535.1| asparaginyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 463

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 100/356 (28%), Gaps = 42/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
            H R R          RN   +++  +F    FI I +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAITRVRNEAATAIHRFFQSRGFIYIQTPIITTSDCEGAGEMFQVTTLNL 182

Query: 65  ----ELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
               ++  +    +  +     L  S +   +    +     + F   +R        H 
Sbjct: 183 DRLAQVQTEIDFSQDFFGKRASLTVSGQLEAEIFATS-IGDCYTFGPTFRAENSNTTRHL 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E        +  M    + +R         +      +   F++    T  E  
Sbjct: 242 AEFWMIEPEMPFYDLQDNMALAESFVRD----VISDVLENCAEDMVFFNQRIDKTTLETL 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                 +                    + +G +      W           +        
Sbjct: 298 RNITENEFIRISYTE-------AIEIVKSSGKKFDFPIEWGSDMQSEHERFLTEEHFKQP 350

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YP            D +     ++    +       E++   ++  R++  +  
Sbjct: 351 V-IVYNYPKTIKPFYMRCNDDGKTVCAMDVLVPGV------GEIIGGSQREERYDILIDR 403

Query: 295 KKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K+      P D  +   L        SG  +GF+RL+ L+T   NI + I  P +
Sbjct: 404 MKEGGL--NPEDYWWYTDLRKYGTVPHSGFGLGFERLIQLITSMTNIRDCIPFPRT 457


>gi|302672135|ref|YP_003832095.1| asparaginyl-tRNA synthetase AsnS [Butyrivibrio proteoclasticus
           B316]
 gi|302396608|gb|ADL35513.1| asparaginyl-tRNA synthetase AsnS [Butyrivibrio proteoclasticus
           B316]
          Length = 461

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 116/360 (32%), Gaps = 50/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
            H R R          R++   ++  YF +  ++ + +  +  +   G++   +   T  
Sbjct: 121 AHLRPRTNLFSAVFRIRSVAAMAVHTYFQDRGYLYVHTPLITGADCEGSDQMFK--ITTF 178

Query: 67  --------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
                           +D   K  ++  S +    +  A     I+ F   +R       
Sbjct: 179 NMNDLPKTEDGKVDFSKDLFGKQSFITGSGQL-QGETFAMAFGDIYTFGPTFRTENSNTQ 237

Query: 113 -HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    + LM     +++   +    K              PE I   
Sbjct: 238 THANEFWMIEPEMAFCDLQGLMDVEEEMLKFVVKYVCDKC-------------PEEIDFC 284

Query: 172 EAFARYANIDLGTTLDNPDQP--DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + F      D    + N        H +    ++A ++   +  + +  ++   + I   
Sbjct: 285 DKFVSKGLKDKLNDIVNAKFTRISHHDVIDILKKADVKWEFEPDYGEDIAKEHEKYIVE- 343

Query: 230 LGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              N    +  +P    +    + P +        L     EL        +  +   R 
Sbjct: 344 -YFNGPVFVTDWPKDIKAYYMKVNPDNKTVAAVDLLVPQAGELMGGSQREENLDKLIERM 402

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++   +K+ I    + +D             SG  MGF+RL+M +TG  NI +VI  P +
Sbjct: 403 DEMGVDKEGID---WYLDTR----RYGGCIHSGFGMGFERLIMYLTGVENIRDVIPYPRT 455


>gi|212690764|ref|ZP_03298892.1| hypothetical protein BACDOR_00251 [Bacteroides dorei DSM 17855]
 gi|237708148|ref|ZP_04538629.1| asparaginyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237723683|ref|ZP_04554164.1| asparaginyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265756804|ref|ZP_06090792.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212666641|gb|EEB27213.1| hypothetical protein BACDOR_00251 [Bacteroides dorei DSM 17855]
 gi|229437894|gb|EEO47971.1| asparaginyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229457701|gb|EEO63422.1| asparaginyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263233590|gb|EEZ19210.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 467

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 63/359 (17%), Positives = 110/359 (30%), Gaps = 44/359 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T+  
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPIITASDCEGAGQMFQVTTKNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGAIIYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M    + I+   + A    +       + F +         
Sbjct: 242 LAEFWMIEPEVAFNDITDNMDLAEDFIKYCVQWALDNCYDDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +     +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLQGVLKEEFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLMTRIQE- 410

Query: 292 MQEKKKIYNETYPID-EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                    E    D   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 411 --------LEIPMKDMWWYLDTRKFGSCPHSGFGLGFERLLLFVTGMTNIRDVIPFPRT 461


>gi|68069109|ref|XP_676465.1| aspartyl-tRNA synthetase [Plasmodium berghei strain ANKA]
 gi|56496176|emb|CAI00406.1| aspartyl-tRNA synthetase, putative [Plasmodium berghei]
          Length = 571

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 46/336 (13%), Positives = 111/336 (33%), Gaps = 36/336 (10%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
               ++ I    R Y ++N F EI +   L  S     +           ++  +  +L 
Sbjct: 258 IFYLQSEICKIFRNYLIDNNFTEIHTPKLLGESSEGGANA-------FQINYFNQNGFLA 310

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQLMKDCM 137
            SP+   +  + +G +++F  A  +R        H  E+  L+    +   Y + +    
Sbjct: 311 QSPQLYKQMCINSGFDRVFEIAPVFRAENSNTYRHLCEYVSLDVEMTYKYDYMENVYFYD 370

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           ++ +                     +E   + +     +Y + D       P       +
Sbjct: 371 SMFKNIFNKL-------------INNEQNKLFIKNIKNQYPSEDFKWLAVTPIFTYEQAI 417

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIE---KIEPNLGINCCTILDRYPAPESALA-NIYP 253
            L  +   + +  ++  +   +  + +   KI          I+  +P+           
Sbjct: 418 KLLIEHKKLNLQSEEILTYDMTTDMEKELGKIIKQTHDTDYYIIINFPSALRPFYTMYNE 477

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
            DP+ +  ++ +    E+ +    + D      +   +  +K  +  +   +D  ++   
Sbjct: 478 EDPKISNSYDFFMRGEEILSGSQRISDV-----KLLLDNIKKFNLDPK--KLD-FYIDSF 529

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  SG  +G +R++ML  G NNI +    P  
Sbjct: 530 AYSSYPHSGCGIGLERVLMLFLGLNNIRKTSLFPRD 565


>gi|329117476|ref|ZP_08246193.1| asparagine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907881|gb|EGE54795.1| asparagine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 448

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 116/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   +  RN I  S  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVMQVRNAIIYSTYEFFDQNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  ++++ +      ++   +   ++      +        +         +  + D 
Sbjct: 236 EYSFLNHDESLDLQEAYVKALIQGVIERAPHALEILERDIDALKR--YITEPFKRVSYDD 293

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             +L    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 294 AISLLQEHEADEDTDYEHVE-----------HGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +       +L            E++    +   +E  + +   +  +
Sbjct: 341 ASFKAFYMKPVPGNSERVLCADL-----LAPEGYGEIIGGSMREDDYEALVAKMDALEMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|315126664|ref|YP_004068667.1| asparaginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015178|gb|ADT68516.1| asparaginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 465

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 111/359 (30%), Gaps = 43/359 (11%)

Query: 13  DFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R  +       RN +  ++  ++ E  F  I +  +  S       +   ST  
Sbjct: 123 HAHLRPRTNMIGAVTRVRNCLAQAIHRFYHEQGFYWISTPIITASDCEGAGEMFRVSTLD 182

Query: 67  -------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          +D   K  +L  S + + +   +A   KI+ F   +R        
Sbjct: 183 MQNLPMTDKGEIDYSEDFFGKEAFLTVSGQLNGETYASAMS-KIYTFGPTFRAENSNTSR 241

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E + K   N+++   +   ++    +  +   F++    T   
Sbjct: 242 HLAEFWMVEPEVAFADLEDIAKLAENMLKYVFKAVLEE----RRDDMEFFAQRIEKTAIS 297

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
               +   D           D        +  G +  +   W           +      
Sbjct: 298 RLEEFVEKDFAQV-------DYTDAVEILKACGKKFEYAVEWGVDLQSEHERYLAEEHFK 350

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               I   YP    A       D +     ++ A  I       E++   ++  R +   
Sbjct: 351 APVVIK-NYPRDIKAFYMRQNEDGKTVAAMDVVAPGI------GEIIGGSQREERLDVLD 403

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
               ++       D  +   L        SG  +GF+RLV  VTG  N+ +VI  P ++
Sbjct: 404 ARLDEMGL--NKEDYSWYRDLRKYGSVPHSGFGLGFERLVAYVTGMGNVRDVIAFPRTK 460


>gi|168009856|ref|XP_001757621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691315|gb|EDQ77678.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 501

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 56/366 (15%), Positives = 102/366 (27%), Gaps = 50/366 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R  +  +  ++F E  F+ + S  +  S           +T + 
Sbjct: 149 AHLRPRTNTFGAVARVRTALAYATHQFFREQGFVWVASPIITASDCEGAGEQFCVTTLIP 208

Query: 68  IQ-----------------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
                                    D   KP +L  S + + +    A    I+ F   +
Sbjct: 209 SSHEDTKTPVSQVPTTKDGLIDWSQDFFGKPAFLTVSGQLNGETYATA-LCDIYTFGPTF 267

Query: 105 RNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R        H  EF M+E   A    +  M      ++                +   F+
Sbjct: 268 RAENSNTTRHLAEFWMIEPELAFADLKDDMACATAYLQYVVRYV----LDNCMEDLEFFN 323

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
           +     +     R  N+     +         LL    ++    V     W         
Sbjct: 324 QWVEKGII---TRLTNVVEKPFVHVTYTEAVELLQKSKKKFEFPVK----WGADLQSEHE 376

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             +          I+  YP    A       D +     ++    +       EL+   +
Sbjct: 377 RYLTEVAFSGNPVIVTDYPKEIKAFYMRQNEDEKTVAAMDILVPRV------GELIGGSQ 430

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           +  R E   +  +++          +L          +G  +GF+RLV   TG  NI +V
Sbjct: 431 REERLEVLERRIEELGLSKESY-WWYLDLRRYGSVPHAGFGLGFERLVQFSTGIENIRDV 489

Query: 343 IWTPFS 348
           I  P +
Sbjct: 490 IPFPRT 495


>gi|256853714|ref|ZP_05559079.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256710657|gb|EEU25700.1| asparaginyl-tRNA synthetase [Enterococcus faecalis T8]
          Length = 444

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 116/349 (33%), Gaps = 37/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +L RN I  +  E+F E  FI+IDS  L   +P         
Sbjct: 123 MDHRHLWLRSS--KQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEG------- 173

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 174 TTELFETDYFGQPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 232

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+ ++E+ +      ++   +    K   +        +      V E F R    D
Sbjct: 233 PEMAYTTHEESLDIQEAYVKHLIKSVL-KNQQYPLDVLERDTALLEKYVLEPFKRITYDD 291

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   +  +                    W + F       I    G+   T +  Y
Sbjct: 292 AIELLQKEEANND--------------YDHIEWGEDFGSPHETFISNYYGV--PTFILNY 335

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L A          E++   E+   ++   ++  +   
Sbjct: 336 PKAIKAFYMKPHPTREDVVICADLIAP-----EGYGEIIGGSERATDYDYLKEKVAEFGL 390

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R V  +TG  +I E I  P  
Sbjct: 391 SEEEY-SWYLDLRKYGSVPHSGFGLGLERAVTFITGNEHIREAIPFPRM 438


>gi|167855563|ref|ZP_02478324.1| asparaginyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853309|gb|EDS24562.1| asparaginyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 467

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRGEDGKVDFSQDFFGRESFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++       ++    +  +   F +    TV   
Sbjct: 245 LAEFWMVEPEFAFATLADNAKLAEDMLKYVFRAVLEE----RKDDLKFFEKHVDNTVISR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G       +W    S      +      +
Sbjct: 301 LENFINSDFA-------QIDYTDAIEVLLKSGKDFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++     P D  +   L        SG  +GF+RL++ VTG  NI EVI  P 
Sbjct: 407 RMVEMGL--NPEDYWWYRDLRRYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPR 460


>gi|149278398|ref|ZP_01884535.1| asparaginyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149230768|gb|EDM36150.1| asparaginyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 482

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 60/364 (16%), Positives = 120/364 (32%), Gaps = 37/364 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          R+ +  ++ +++ E  F+ + +  +  S       +        
Sbjct: 119 AHLRFRTNTFNAVFKIRHALAFAIHKFYNERGFVYMHTPVITASDAEGAGEMFKVTTLDF 178

Query: 60  -RAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                T+    D   +  +     L  S +    +L A    +I+ F   +R        
Sbjct: 179 DNPPRTDDGKVD-FSEDFFARATNLTVSGQL-EGELAAMAFGQIYTFGPTFRAENSNTTR 236

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M+   ++++     A +      +   N   E E      
Sbjct: 237 HLAEFWMIEPEIAFADLEDNMQLAEDMMKFVISYALENCKEEIDFLNNRLLEEEKSKPQN 296

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQA--------QQAGIRVAHDDTWSDIFSRILIE 224
             +  + I+      + D          A        Q+   +   D+  +D+ S     
Sbjct: 297 ERSELSLIEKLNFCLDNDFERLTYTEAIAILRSSKPNQKKQFKYLIDEWGADLQSEHERY 356

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +E +       IL  YPA   +       +   ++  +  A    L     E++   ++
Sbjct: 357 LVEKH--FKKPVILTDYPADIKSFYM--RQNEPDSQGRKTVAAMDILFPGIGEMIGGSQR 412

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             R +K     +++      +   +L          +G  +GF+RL++ VTG  NI +VI
Sbjct: 413 EERLDKLTTRMEELNIPQDEL-WWYLDTRRFGSAPHAGFGLGFERLILFVTGMTNIRDVI 471

Query: 344 WTPF 347
             P 
Sbjct: 472 AFPR 475


>gi|229109657|ref|ZP_04239243.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228673698|gb|EEL28956.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 432

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 112/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN FI I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEFLIENDFIRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 336 QNKENPAITDSFDLLYKGLEITSGAQRIHNYELLLASFKE-----KGLHPEKFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|304316831|ref|YP_003851976.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778333|gb|ADL68892.1| asparaginyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 433

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 115/349 (32%), Gaps = 43/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   L  R+ +  +++E+   N F+ IDS  +  S    T      
Sbjct: 118 LDNRHLWIRT--PKQHAILSIRHEVIKAIQEFLNNNGFVRIDSPIITPSTCEGTS----- 170

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +L   D+  +  YL  + +   ++  A    K++ F   +R  +     H  EF M+E 
Sbjct: 171 -DLFQIDYFGENAYLSQTGQLY-QEAAAMALGKVYSFGPTFRAEKSKTRRHLNEFWMVEP 228

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +   + + M+    ++    +   +             S+ E I              
Sbjct: 229 EMSFVDHYENMEIQEKLVEYIVQSVLENRSKELKELGRDLSKLEKI-------------- 274

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                    P   L Y +A +   +  ++  W +         +  +   +    +  YP
Sbjct: 275 -------KTPFPRLTYDEAIEILKKNGYEIEWGNDLGSPDETFL--SNQFDKPVFITEYP 325

Query: 243 A-PESALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           A  ++         P      +L A     E+      + D      R ++E    +   
Sbjct: 326 AKCKAFYMQPKEDRPEVVMCADLLAPEGYGEIIGGSQRIHDYDLLIKRLKEENLPLEMYD 385

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              + ID   L         SG  +G +R V  +T   ++ E I  P +
Sbjct: 386 ---WYID---LRK-YGSVPHSGFGLGIERTVAWITNTEHVRECIPFPRT 427


>gi|229822933|ref|ZP_04449003.1| hypothetical protein GCWU000282_00225 [Catonella morbi ATCC 51271]
 gi|229787746|gb|EEP23860.1| hypothetical protein GCWU000282_00225 [Catonella morbi ATCC 51271]
          Length = 437

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 104/352 (29%), Gaps = 47/352 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+  +   I++D   L   +P         
Sbjct: 120 MDHRHLWLRSS--KQHAIMQIRNEIIRATYEFMNQEGLIKVDPPILTGSAPEG------- 170

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 171 TTELFHTKYFDEDAFLSQSGQLYL-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMME 229

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E+ ++     +                           I       +  N D
Sbjct: 230 VELAFVEHEENLQFQERYVAHLVRNV--------------------IDHCGLALKTLNRD 269

Query: 182 LGTTLDNPDQPDRHLLYLQAQQA-GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           +         P   + Y  A +        D  W D F       I      +    +  
Sbjct: 270 VAVLEQYTKLPYPRISYTDAIKLLNDNGFDDIQWGDDFGSPHETFIASQY--DRPIFIVN 327

Query: 241 YPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKK 297
           YP             DPR     +     +       E++   E+   FE   E  +   
Sbjct: 328 YPKAIKPFYMRINEEDPRTVLCAD-----MIAPEGYGEVIGGSERIVDFETLDENIKAYN 382

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +    Y     +L          SG  +G +R V  ++G  +I E    P  
Sbjct: 383 LDPSAY---AWYLDLRKYGAVPHSGFGLGLERAVAWLSGIEHIRETSPFPRL 431


>gi|117920749|ref|YP_869941.1| asparaginyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166232080|sp|A0KXL6|SYN_SHESA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|117613081|gb|ABK48535.1| asparaginyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 466

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 109/358 (30%), Gaps = 47/358 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  +       RN +  ++  ++ EN F+ + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEM--FRVSTL 182

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                            D   K  +L  S + + +    A   KI+ F   +R       
Sbjct: 183 DMENLPRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A  +   +      +++ A      +    +  +   F++    TV 
Sbjct: 242 RHLAEFWMVEPEVAFATLSDIASLAEGMLKYAFNAVLAE----RMDDLQFFAQHVDKTVI 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E    + + D           D        Q+ G       +W    S      +     
Sbjct: 298 ERLQSFVSSDFAQV-------DYTDAVDILQKCGREFEFPVSWGIDLSSEHERYLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 403

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               +++       D  +   L        SG  +GF+RLV  VTG +NI +VI  P 
Sbjct: 404 DMRLEEMDL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLVSYVTGVSNIRDVIPFPR 459


>gi|260886922|ref|ZP_05898185.1| lysine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260863351|gb|EEX77851.1| lysine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 308

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 17/160 (10%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R  I  S+R Y  E  F+E+++ 
Sbjct: 148 LRPLPEKFHGLKDVEMRYRQRYVDLIMNPEVKDTFIARTKIIQSIRRYLDERGFLEVETP 207

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F T     + +   LYL+ + E + K+L+  G E+++     +RN 
Sbjct: 208 VMSTIAGGAA-ARPFVT---YHNALDMKLYLRIATELNLKRLIVGGLERVYEIGRIFRNE 263

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
                H PEFT +E Y+A+  Y  LM     I   AA   
Sbjct: 264 GIDVRHNPEFTSIEIYQAYADYNDLMDVTEGICCQAARTC 303


>gi|218883641|ref|YP_002428023.1| asparaginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765257|gb|ACL10656.1| asparaginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 432

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 119/353 (33%), Gaps = 48/353 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           + ++  W R   + +      ++ I  + REYF  N + E++   L  S   G  T    
Sbjct: 116 LDNRHLWVRSPRFTK--IFRIKHTILQAGREYFTRNGWWEVNPPILTASACEGGAT---- 169

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L   ++     YL  S +   + L+    EK++    ++R  +     H  E+  L
Sbjct: 170 ----LFPVEYFESKAYLSQSAQLYLEALIY-VLEKVWSLTPSFRAEKSRTRRHLAEYWHL 224

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A  S + +MK    +         ++  S                           
Sbjct: 225 EPEAAWYSMDDMMKVAEELASHIVTRVLEERRSELVD--------------------LGR 264

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D+       + P   + Y +A +   +   +  W D         +   +       +  
Sbjct: 265 DIEKLKPAMETPYPRIRYDEAIEILQKKGVNVKWGDDLGADEERIL--TMEFEKPFFVTH 322

Query: 241 YPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKK 297
           +P    S    + P++P     F+L            E++   E+  R++   +   ++ 
Sbjct: 323 FPRQIKSFYMKVDPSNPNVVLGFDL-----LAPEGYGEIVGGGEREDRYDVLYQKIIEQG 377

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +  E Y   + +L          SG  +G +R+ M +TG ++I + +  P  +
Sbjct: 378 LNPEDY---KWYLDLRKYGSVPHSGFGLGVERVTMWITGLDHIRDTLPFPRFR 427


>gi|307261136|ref|ZP_07542813.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306869166|gb|EFN00966.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 467

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 107/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRTDEGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++   +   ++             + + IT  E 
Sbjct: 245 LAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHIDK-DVITRLEN 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F                Q D         ++G       +W    S      +      +
Sbjct: 304 F----------IASPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E    
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEVLDT 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++     P D  +   L        SG  +GF+RL++ VTG  NI EVI  P 
Sbjct: 407 RMVEMGL--NPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPR 460


>gi|327310528|ref|YP_004337425.1| aspartyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947007|gb|AEA12113.1| aspartyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 431

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 123/365 (33%), Gaps = 59/365 (16%)

Query: 2   HQIPSQPW-WNRD--FHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSM- 47
             +P   W    D     + R                + I  ++RE    ++F+E+ +  
Sbjct: 104 RPLPVDLWEGTSDLPTRLKYRAADLKSPRNLAIFTTASEILKAVREVLYRHKFVEVFTPK 163

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  S      + A         +  +  YL  SP+   K+ L A  E++F  A A+R  
Sbjct: 164 IIATSTEGGAELFAVL-------YFERVAYLAQSPQLY-KEQLTASLERVFEIAPAYRAE 215

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +     H  EF  ++   A   Y  +M     I+R  A V N                  
Sbjct: 216 KHNTDYHLNEFISIDGEGAFMDYNDIMDVLEEIMRSIASVVN------------------ 257

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             +  +   +     +   +D   + D      + +  G  V     W D  +  + + +
Sbjct: 258 --SRRDRLEKVGIRPVLEKVDKIPRVDYDEAVERLRALGYDVK----WGDDLTVEMQKAL 311

Query: 227 EPNLGINCCTILDRYPAPESALANIY-PADPRFTKRFELYACNIELCNACDELLDPIEQR 285
               G      +  +PA            DP+ T+ ++L    IE+ +    +    +  
Sbjct: 312 TKFYG--PLYFIVNFPASLRPFYTKRIDGDPKKTESYDLILDGIEVVSGATRIHRREDLE 369

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
                  + +++  +      E  L+     MP  +G  MGF+RL+M + G  N+ E + 
Sbjct: 370 R------EMRERGLDPAAF--ESHLSVFDWGMPPHAGFGMGFNRLLMSLLGLKNVREAVL 421

Query: 345 TPFSQ 349
            P  +
Sbjct: 422 YPRDR 426


>gi|253688172|ref|YP_003017362.1| asparaginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754750|gb|ACT12826.1| asparaginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 466

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 107/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A    ++ F   +R        H
Sbjct: 185 ENLPRTEQGKVDFSEDFFGKEAFLTVSGQLNGETYACA-LSNVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + + +     N+++   +       + +  +   F+E         
Sbjct: 244 LAEFWMIEPEVAFATLDDVAGLAENLLKYVFQAV----LNERADDMAFFAERVDKEAITR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ + D           D           G +  +   W    S      +       
Sbjct: 300 LEKFVSSDFAQV-------DYTDAVEILLNCGKQFENPVYWGVDLSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R  +   
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLAELDS 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLEEMGL--NKEDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|193217032|ref|YP_002000274.1| asparaginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|226695299|sp|B3PNG8|SYN_MYCA5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|193002355|gb|ACF07570.1| asparaginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 450

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 122/343 (35%), Gaps = 26/343 (7%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
               +R    R  ++ R  +   + ++F +N FI I    +  + G          +   
Sbjct: 122 PHLRHRTNLFRAIMIIRATLAYEIHQFFNKNDFINISVPIITSNDGEGAGETLLVDDESK 181

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHE 127
               ++  +L  + +   +   AAG + ++ FA  +R        H  EF M+E   A  
Sbjct: 182 DYFFKQKAFLGVTGQLHAEAY-AAGFKNVYTFAPTFRAENSHTSRHLAEFWMIEPEMAFA 240

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
           + +  +K   ++++   +   +K      +           T+ E   +   +       
Sbjct: 241 TLKDDIKIADSMLKTVIKNTIEKCPDEMKLLDFLKDNTLLPTLNEFIHKKITV------- 293

Query: 188 NPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
                D  +   +  +   R    +  +    +    + I  ++       +  YP    
Sbjct: 294 ----LDYKVAVKKLLEHKYRFEEKNIYFGMDLASEHEKFISESIVKGPV-AIINYPKDIK 348

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           A      AD +    F+L    I       EL+   ++  R+EK +    ++     P+ 
Sbjct: 349 AFYMYQNADNKTVACFDLLVPGI------GELIGGSQRESRYEKLVTRMAELNIPQEPL- 401

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +L         SSG  +GF+RLVM VTG +NI +VI  P  
Sbjct: 402 QWYLDLRKYGYAPSSGFGLGFERLVMYVTGISNIRDVIPFPRV 444


>gi|313204393|ref|YP_004043050.1| asparaginyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312443709|gb|ADQ80065.1| asparaginyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 465

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 106/357 (29%), Gaps = 40/357 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++  +F E  F    +  +  S       +   +T   
Sbjct: 121 AHLRPRTNTFGAVFRVRHNMAMAIHTFFHERGFFYFHTPIITASDCEGAGQMFQVTTMNL 180

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   K   L  S +    +L A     I+ F   +R        H
Sbjct: 181 YDLKKDETGQIDYSNDFFGKQASLTVSGQL-EGELAAMSMGAIYTFGPTFRAENSNTPRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A     + M+   + I+   + A        +  CN + +         
Sbjct: 240 LSEFWMIEPEVAFNEIAENMQLAQDFIQYCVKWALDNCKDDLDFLCNMYDK--------E 291

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N  +    +         +   A   G +     +W           +       
Sbjct: 292 LIERLNFVVNNDFERVTYTKGVEILEAAIAKGQKFEFPVSWGTDLQSEHERYLVEQHYKK 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              IL  YP    +       D +  +  ++    I E+        D ++ + R     
Sbjct: 352 PV-ILTDYPKEIKSFYMKQNDDGKTVRAMDVLFPKIGEIIGGSQREEDYLKLKTR----- 405

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               ++   T  I   +L          SG  +GF+RL++ VTG +NI +VI  P +
Sbjct: 406 --ADEMGVPTKDI-WWYLETRKFGTAPHSGFGLGFERLLLFVTGMSNIRDVIPFPRT 459


>gi|322368673|ref|ZP_08043240.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320551404|gb|EFW93051.1| aspartyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 436

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 103/352 (29%), Gaps = 50/352 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +       R               R+ + +++ E+F    F  +D+  L          +
Sbjct: 115 DLSTRLDNRSIDLRKPEAYAVFSLRSKLVNAMEEWFDGEGFRNVDTPLLSQEGAEGGAEL 174

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFT 118
                      +  + ++L  SP+   + L+AAG +KI+    A+R        H  E +
Sbjct: 175 FPVV-------YYGEEVFLSQSPQLYKQMLMAAGFDKIYETGTAFRAEAFATSRHVSEIS 227

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           M +   A+      + D              +  + +                       
Sbjct: 228 MFDVELAYIDDHHDVMDVQEESLRHTLERVSENATDE-------------------LETL 268

Query: 179 NIDLGTTLD-NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
            +DL    D  P         + A +       +        ++L E  E     +    
Sbjct: 269 GVDLAVPTDPFPRVTFEEARDILATEFDHVPEDETDLDTKGEKLLGEYFEEQG--HPAFF 326

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  YP  +       P D   +++F+L     EL +      D        E +      
Sbjct: 327 VVGYPDEKFYYKQDVPGDDIASRKFDLIYKGQELSSGGQREHDIETMSEYMEDQ-----G 381

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              E +     +L      +P   G  +G DRLV  V   +NI E I  P  
Sbjct: 382 ADPENFH---FYLEAFRFGIPPHGGYGLGIDRLVQKVGELDNIKEAILFPRD 430


>gi|251789278|ref|YP_003003999.1| asparaginyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247537899|gb|ACT06520.1| asparaginyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 466

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 114/360 (31%), Gaps = 49/360 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F ++ F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFHQSGFYWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRDDQGKVDFSEDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + + +     N+++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMIEPEVAFATLDDIAALAENLLKFVFKAVLEE----RADDMKFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        +  G    +  +W    S      +       
Sbjct: 300 LERFVSSDFVQV-------DYTDAITILENCGQTFENPVSWGIDLSSEHERYLAEKH-FQ 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              ++  YP    A      +D +             L     E++   ++  R E ++ 
Sbjct: 352 APVVVKNYPKDIKAFYMRMNSDGKTVAAM------DVLAPGIGEIIGGSQREERLE-QLD 404

Query: 294 EKKKIYNETYPI---DEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +     E   +   D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 405 IR----LEEMGLSKEDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|81428525|ref|YP_395525.1| asparaginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123769698|sp|Q38X65|SYN_LACSS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|78610167|emb|CAI55216.1| Asparaginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 432

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 108/348 (31%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R    +  RN I  +  E+F +  F+++D   L   +P         
Sbjct: 116 LDHRHLWLRSK--RPFAIMKIRNEIIRATYEFFNQEGFMKMDPPILTGSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++     YL  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 167 TTELFHIEYFDNDAYLTQSGQLYAEAGAMA-FGKVFTFGPVFRAEKSKTRRHLTEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ ++     +    +                      I       +  + D
Sbjct: 226 PEMAFMEQDESLEVQEKYVAYLVQNV--------------------IDHCAYELKLLDRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +         P   + Y +A +       D  W D F       +           +  Y
Sbjct: 266 IDQLKKYTQTPYPRISYDKAVEMLQAADFDIKWGDDFGAPDETYLSDQ--FEQPVFILNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P             P  T+       ++       E++   E+   F+K   E K +  +
Sbjct: 324 PKAIKPFYM----KPHPTRDDVYLCADLLAPEGYGEIIGGSERETDFDKLEAEIKSMGLD 379

Query: 302 TYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +L          SG  +G +R +  + G +++ E I  P  
Sbjct: 380 IEEY-QWYLDLRRYGSVPHSGFGLGLERAITWICGIDHLREAIPFPRM 426


>gi|331268543|ref|YP_004395035.1| asparaginyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125093|gb|AEB75038.1| asparaginyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 463

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F +  F+ + +  +  S       +  F    +
Sbjct: 122 AHLRPRSNAFSAVFRVRSLAAYAIHKFFQDQGFVYVHTPIITGSDCEGAGEM--FRVTTL 179

Query: 68  IQDHIRKP----------LY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             D++ K            +     L  S +   +    A    ++ F   +R       
Sbjct: 180 DMDNLPKDEQGNIDYKEDFFGKESNLTVSGQLEAEIYALA-FRNVYTFGPTFRAENSNTA 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M     +++                    F++     + 
Sbjct: 239 RHASEFWMIEPEMAFAELKDYMDVAEEMVKYIINYV----RENAPEEMEFFNKFIDKGLL 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N +                    Q++G +  +   W           +   + 
Sbjct: 295 ERLDNVVNSNFARISYTE-------AVEMLQKSGAKFEYPVEWGIDLQTEHERYLTEEIY 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    I       E++   ++  R +  
Sbjct: 348 KKPV-FVTDYPKDIKAFYMRMNEDNKTVAAADLLVPGI------GEIIGGSQREERLDVL 400

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                ++          +L        + +G  +GF+R++M +TG +NI +V+  P +
Sbjct: 401 EARMAELGLNKEDY-WWYLELRKYGETKHAGYGLGFERMIMYLTGMSNIRDVLPFPRT 457


>gi|15606147|ref|NP_213524.1| lysyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|8928390|sp|O66963|SYK3_AQUAE RecName: Full=Uncharacterized protein aq_763
 gi|2983331|gb|AAC06920.1| lysyl-tRNA synthetase-like protein [Aquifex aeolicus VF5]
          Length = 293

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 90/309 (29%), Positives = 144/309 (46%), Gaps = 35/309 (11%)

Query: 29  QSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKK 88
            + +R++F E  + E+ +  L   P  ++++     E++ +    K  +L TSPE+S KK
Sbjct: 11  INEVRKFFKEKGYTEVSTPLLLDFPNLDSNVEPVKVEVLERGE-NKVKWLHTSPEYSMKK 69

Query: 89  LLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           LL+  +  IF     +RN E G LH+ EF MLEWY     Y  L+++   ++        
Sbjct: 70  LLSRYKRDIFQITKVFRNNEWGRLHRIEFHMLEWYAVGCDYLYLIEELKQLL-------- 121

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                        F E E ITV EAF R+    +          +   +    ++ GI  
Sbjct: 122 --------NKLFGFKEFEVITVEEAFKRHFGEGIPQ--------EESSMKELLERKGIDF 165

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
           + D+ W  +F R    ++E +LG N  T L  +P    ALA +      + +RFEL+   
Sbjct: 166 SEDEDWETLFYRAF-IEVERHLGFNRPTFLINFPERLCALAKVRN---GYAERFELFIKG 221

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDR 328
           IEL N   E  +P E R R E+E +++        P+DEDF+    +MP+ +G ++G DR
Sbjct: 222 IELANGWTEETNPEEVRKRLEREAKKRN------LPLDEDFIKAHEDMPECAGCSLGIDR 275

Query: 329 LVMLVTGAN 337
           L  L  G  
Sbjct: 276 LFSLFLGKE 284


>gi|157146376|ref|YP_001453695.1| asparaginyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157083581|gb|ABV13259.1| hypothetical protein CKO_02135 [Citrobacter koseri ATCC BAA-895]
          Length = 492

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 105/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 151 AHLRPRTNMIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 210

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 211 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 269

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +    +    +  +   F+E         
Sbjct: 270 LAEFWMLEPEVAFANLNDVAGLAEAMLKYVFKAVLDE----RADDMKFFAERVDKDAISR 325

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        +  G +  +   W    S      +       
Sbjct: 326 LERFIDADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 378

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 379 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 431

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 432 RMAEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 486


>gi|321261513|ref|XP_003195476.1| aspartate--tRNA ligase [Cryptococcus gattii WM276]
 gi|317461949|gb|ADV23689.1| Aspartate--tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 884

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 106/329 (32%), Gaps = 36/329 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H   +     R  +    R+   +  F+EI++  LQ S   E+    F       ++  
Sbjct: 229 RHPTTQAIFKIRAKVLKVFRDTLDDLGFLEINTPKLQPSA-TESGAEVFRV-----NYFG 282

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           +  +L  SP+   +  ++A   +++     +R        H  E+T L+     +     
Sbjct: 283 RKAFLAQSPQLMKQMAISADFRRVYEIGPVFRAENSNTHRHLTEYTGLDIEMTIQQEYYE 342

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +   ++II      A + +                    +    +   D     +     
Sbjct: 343 VFRVLDIILRNIFKAIKGMKL----------------ELDRVREFFPSDDFQLPEETPII 386

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
             H      +  G  V  +D  +    R+    I+  LG +   ++D++P          
Sbjct: 387 PFHEAVQMLRDDGRDVEEEDFSTPDEIRLGE-LIKEKLGTD-YYVIDKFPVSARPFYTAN 444

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
                 T  F+++    E+C     + DP + R   E+       I  +      ++L  
Sbjct: 445 DGK--ITNSFDMFIRGQEICTGGQRINDPKKLRESMEE-----SGINEDEM---AEYLQA 494

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
               MP   G  +G +R+V       ++ 
Sbjct: 495 FDWGMPPHGGAGLGVERIVTFFLNLPDVR 523


>gi|268609394|ref|ZP_06143121.1| asparaginyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 472

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 54/369 (14%), Positives = 107/369 (28%), Gaps = 52/369 (14%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PG 54
           +  IP         H R R          R+++ S++ EYF  + ++ I++  +  S   
Sbjct: 130 LRTIP---------HLRGRTNTFNAVWRVRSILASAIHEYFQSHNYVYINTPLITGSDCE 180

Query: 55  NETHIRAFST-----------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHA 103
               +   +T           +    D   K   L  S +   +    A   KI+ F  +
Sbjct: 181 GAGEMFQVTTIGYSNEYKSEEDYYANDFFGKRAGLSVSGQLEGEMAAMA-MGKIYTFGPS 239

Query: 104 WRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           +R        H  EF  +E   A    + +++   ++++        K+          F
Sbjct: 240 FRAENSNTPKHLAEFWHIEPEVAFMELDDVIELAEDMLK----FVIGKLLKTCPDEIAFF 295

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
                  +        + D G                  +++G    +   W        
Sbjct: 296 DAHFEKGLKARLEELISHDFGRVTYTE-------AIELLKKSGEDFVYPVEWGCDLQTEH 348

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +           +  YP    +       D +     +L    +       E    +
Sbjct: 349 ERYLSEK-VFKKAVFVTDYPKEIKSFYMKQNPDGKTVAAVDLLVPGVGEIIGGSEREYDL 407

Query: 283 EQRHRFEKEMQEKKKIYNETYPID--EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           E         +    +      +D   D++           G  +GF+RL+M  TG  NI
Sbjct: 408 E---------KLLAAMKERNMNLDLYNDYIDLRKFGSVPHGGFGLGFERLIMYTTGMANI 458

Query: 340 NEVIWTPFS 348
            +VI  P +
Sbjct: 459 RDVILFPRT 467


>gi|313608032|gb|EFR84120.1| asparaginyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 365

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 103/355 (29%), Gaps = 54/355 (15%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F++ID   L   +P         
Sbjct: 49  MDHRHLWLRSN--RQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEG------- 99

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 100 TTELFHTKYFEEDAFLSQSGQLYMEAAAMA-FGKVFSFGPTFRAEKSKTRRHLIEFWMIE 158

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPFSEPEYITVAEAF 174
              A    E  ++   N +    +                 +      +    IT  EA 
Sbjct: 159 PEMAFYKLEDSLQVQENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAI 218

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R                          + G     D  W D F       I  +     
Sbjct: 219 ER------------------------LHELGFD---DIVWGDDFGAPHETAIADS--FEK 249

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  YP            +        +   ++       E++   E+ H  E     
Sbjct: 250 PVFITHYPKAIKPFYMPEDPENDQV----VLCADMIAPEGYGEIIGGSERIHDLETLQAR 305

Query: 295 KKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +    +       +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 306 MEDFDLDQEAY-SWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRL 359


>gi|300776373|ref|ZP_07086231.1| asparagine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300501883|gb|EFK33023.1| asparagine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 482

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 59/371 (15%), Positives = 119/371 (32%), Gaps = 51/371 (13%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R+ +  ++  +F +NQF  I++  +  +       +  F    
Sbjct: 122 QAHLRFRTNLFGAVFRVRHAVSFAVHSFFNQNQFFYINTPVITGADAEGAGEM--FGVTN 179

Query: 67  IIQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
              +             +  +     L  S +    +  A G  +I+ F   +R      
Sbjct: 180 FDLNNMPRTEEGEIDFAQDFFGRKTNLTVSGQL-EGETAAMGLGRIYTFGPTFRAENSNT 238

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF M+E   A  + E  +    + ++   +                F E +    
Sbjct: 239 TRHLAEFWMIEPEVAFNNLEDNIDLAEDFLKYVIQYVLDNCKDDLEFLDKRFEEEQKSKP 298

Query: 171 AEAFARYANIDLG--------TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
            +  A+   I+            +   +  +  L   + ++       +   +D+ S   
Sbjct: 299 EKERAKEGLIEKLQNVVAKRFKRVSYTEAIEILLNSKENKKGKFAYPVEKWGTDLQSEHE 358

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +E +       +L  YP    A       D +     ++    I       E++   
Sbjct: 359 RYLVEKHFES--PVVLFDYPKEIKAFYMKLNDDNKTVAAMDVLFPGI------GEIIGGS 410

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDED----FLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
           E+  R +     K+K+ +    +DE     +L          +G  +G +RLV+ VTG  
Sbjct: 411 EREARLD---VLKQKMVD--MHVDEHELWWYLDTRKFGSVPHAGFGLGLERLVLFVTGMT 465

Query: 338 NINEVIWTPFS 348
           NI +VI  P +
Sbjct: 466 NIRDVIPFPRT 476


>gi|157961855|ref|YP_001501889.1| asparaginyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083480|sp|A8H467|SYN_SHEPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|157846855|gb|ABV87354.1| asparaginyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 466

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 111/356 (31%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  +       RN +  ++  ++ E  +I + +  +  S       +   ST  +
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYNEQGYIWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDKGTVDYAEDFFGKESFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + +   K   ++++   +   ++    +  +   F++    T  E 
Sbjct: 244 LAEFWMVEPEVAFANLDDAAKLAEDMLKYCFKAVLEE----RRDDLEFFAQRVEKTAIER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              +   D         Q D        +       +D  W           +       
Sbjct: 300 LENFVTSDFA-------QIDYTDAIEILKACDKDFEYDVEWGIDLHSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R   ++ 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGAQREERL--DVL 403

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + +    E    D  +   L        +G  +GF+RLV  VTG +NI +VI  P 
Sbjct: 404 DARLAEMELSQEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPR 459


>gi|66356638|ref|XP_625497.1| asparaginyl-tRNA synthetase (NOB+tRNA synthase) [Cryptosporidium
           parvum Iowa II]
 gi|46226491|gb|EAK87485.1| asparaginyl-tRNA synthetase (NOB+tRNA synthase) [Cryptosporidium
           parvum Iowa II]
 gi|323509245|dbj|BAJ77515.1| cgd8_350 [Cryptosporidium parvum]
          Length = 499

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 114/381 (29%), Gaps = 55/381 (14%)

Query: 3   QIPSQPW---WNRDF-HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +     + R+  H R R       +  RN +  ++ EYF +N F+ I +  +  + 
Sbjct: 131 PLAKKHHSKEFLREVAHLRPRSQFFSSVMRIRNSLAIAIHEYFQKNGFMYIHTPIITAAD 190

Query: 53  PGNETHIRAFSTELIIQ-------------------------DHIRKPLYLQTSPEFSCK 87
                 +   +T L  +                         D   K  YL  S + + +
Sbjct: 191 CEGAGEMFQVTTVLPPESKNNISNIPASKIEGSQDMAVDYKKDFFGKASYLTVSGQLALE 250

Query: 88  KLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV 146
               +  + ++ F   +R        H  EF M+E   A       MK    +++   E 
Sbjct: 251 NFACSMSD-VYTFGPTFRAENSHTTRHLAEFWMIEPEMAFADLSDNMKLGEGLLKYTVEY 309

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
                      +     +     + E        +              +L    ++  +
Sbjct: 310 V----LINNMPDLLYLDKNIENGLVERLKVICKEEFARISY---TEAIEMLKPHDKEFTV 362

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
            V+          + + + +E         I+  YP    +       D       ++  
Sbjct: 363 PVSWGMDLGSEHEKYITDVLEK-----RPCIIYNYPKDIKSFYMKLNEDGNTVAAMDILV 417

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGF 326
             I       +  D IE+          K +  +       + L         SG  +GF
Sbjct: 418 PKIGEVIGGSQREDDIEKLE-----NAIKSRNMDPAPYWWYNELRK-YGSVPHSGFGLGF 471

Query: 327 DRLVMLVTGANNINEVIWTPF 347
           +RL+M+VTG  N+ +VI  P 
Sbjct: 472 ERLIMMVTGVENVRDVIPFPR 492


>gi|314933638|ref|ZP_07841003.1| asparagine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653788|gb|EFS17545.1| asparagine--tRNA ligase [Staphylococcus caprae C87]
          Length = 430

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 108/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F +N F +ID   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEIIRATYEFFNDNGFTKIDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   ++F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDQDAFLSQSGQLYMEAAAMAD-GRVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      E   +  + D
Sbjct: 224 PEMAFTNHAESLEVQEQYVTHVVQSVLKNC--------------------ELELKALDRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +    +   D  W + F       I  +   +    +  Y
Sbjct: 264 TTKLEKVATPFPRISYDDAIEFLKEQGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P +       +L A     E+    + + D      R ++      ++
Sbjct: 322 PTQIKPFYMQPNPDNEDTVLCADLIAPEGYGEIIGGSERINDLDLLEQRIKE-----HEL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E+Y    D           SG  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEESYSYYLDLRR--YGSVPHSGFGLGLERTVAWISGVEHVRETSPFPRL 424


>gi|227329500|ref|ZP_03833524.1| asparaginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 466

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 108/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A    ++ F   +R        H
Sbjct: 185 ENLPRTEQGKVDFSEDFFGKEAFLTVSGQLNGETYACA-LSNVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + + +     N+++   +       + +  +   F+E         
Sbjct: 244 LAEFWMIEPEVAFATLDDVAGLAENLLKYVFQAV----LNERADDMAFFAERVDKEAITR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ + D           D           G +  +   W    S      +       
Sbjct: 300 LEKFVSSDFAQV-------DYTDAVEILLNCGKQFENPVYWGVDLSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R   ++ 
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERL-AQLD 404

Query: 294 EKKKIYNETYPI---DEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +     E   +   D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 405 SR----LEEMGLNKEDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|12044886|ref|NP_072696.1| aspartyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351148|sp|P47282|SYD_MYCGE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3844646|gb|AAC71252.1| aspartyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166079025|gb|ABY79643.1| aspartyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 550

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 68/415 (16%), Positives = 116/415 (27%), Gaps = 98/415 (23%)

Query: 16  YRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RRR     LL R+    ++R +F +  FIEI++ +L   +P      + F     I+  
Sbjct: 120 LRRRLMQKRLLLRHQFILAIRNWFNQQGFIEIETPTLSKSTPEG---AQDFLVPARIRK- 175

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ AG EK F  A  +R+ +     QPE T +++  +  + + 
Sbjct: 176 -DCFYALVQSPQIYKQLLMIAGVEKYFQIARVYRDEDSRKDRQPEHTQIDFEISFCNQKM 234

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA------------- 178
           +M     +         Q                E     +   RY              
Sbjct: 235 IMNLVEKLFFSVFLDVFQIKIKKTFPVFKFSELFERFGSDKPDLRYGFEIKDFTSLFQDH 294

Query: 179 -----------NIDLGTTLDNPDQPDRHL--LYLQAQQAGI------------------- 206
                       I  G  L N +     +  L   A+   +                   
Sbjct: 295 QNQFTKLIEAKGIIGGIELTNIELSTDKIKALRKIAKDHDVSLEVHNKNNSTLKTSIKCD 354

Query: 207 ------------RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP---------APE 245
                       +         I + +                +  +P            
Sbjct: 355 EKNTLLLVANKSKKKAWTALGAIRNELKYHLDIVKPNQYSFCWVVDFPLYDFDEKTNQWI 414

Query: 246 SALANIYPADPRFTKRF------------ELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
           S           +   F            +L     E+ +    + DPI Q+        
Sbjct: 415 SNHNIFSKPKQEWIDNFESNKNEALSEQFDLVLNGFEIGSGSIRINDPIVQKRLMNSLNI 474

Query: 294 E--KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +  K     E Y             P   G+ +G DRL+M++   +NI EVI  P
Sbjct: 475 DPNKFAFLLEAYQ---------YGAPVHGGMGLGIDRLMMILNQTDNIREVIAFP 520


>gi|158520113|ref|YP_001527983.1| asparaginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158508939|gb|ABW65906.1| asparaginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 445

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 56/347 (16%), Positives = 105/347 (30%), Gaps = 39/347 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+    ++  Y  +  F  + +  L  S       +  FS    
Sbjct: 120 AHLRPRTNKYSALFRLRSEAGFAIHSYLRDQGFFHVHTPILTGSDCEGAGEL--FSVTSR 177

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAH 126
                 + ++L  S + + +        +++ F   +R        H  EF M+E   A 
Sbjct: 178 SP-LFDRDVFLTVSGQLAAEMFAL-CLGRVYTFGPVFRAEHSNTARHAAEFWMVEPEIAF 235

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
            + EQ M      ++       +                      + F+R+ + +L  TL
Sbjct: 236 CNLEQNMDFAQAFVKQTVTHMVENC----------------GPDMDLFSRFVDPELPATL 279

Query: 187 DNPDQPDRH-----LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           DN    +              ++G   +    + +         +   +       +  Y
Sbjct: 280 DNILASEFERISYKTAIDLLVRSGTAFSFTPEYGNDLQTEHERYLTETVFKKPV-FVYDY 338

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            D R     +L    I       EL+   ++  R +   Q+       
Sbjct: 339 PRAIKPFYMRVNDDGRTVAAMDLLVPRI------GELIGGSQREERLDVLEQQMDNSGLS 392

Query: 302 TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                    +        SG  MGF+R +MLV+G +NI +VI  P +
Sbjct: 393 KDHYGWYLDSRRYGSVAHSGFGMGFERFLMLVSGVSNIRDVIPFPRT 439


>gi|19075852|ref|NP_588352.1| cytoplasmic aspartate-tRNA ligase Drs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74676078|sp|O74407|SYDC_SCHPO RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3618213|emb|CAA20876.1| cytoplasmic aspartate-tRNA ligase Drs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 580

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 57/355 (16%), Positives = 116/355 (32%), Gaps = 34/355 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D     R               +  I  + RE+ + N F EI +  +   S    ++   
Sbjct: 235 DTRLDNRVLDLRTPTNQAIFDIQAGICQAFREFLLSNSFNEIHTPKMSGASSEGGSN--- 291

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               +    + +   +L  SP+   + L+AA  E++F     +R  +     H  EFT L
Sbjct: 292 ----VFKIQYFKTDGFLSQSPQLYKQMLIAADRERVFEIGPVFRAEDSNTYRHMTEFTGL 347

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY-ITVAEAFARYAN 179
           +   A   +   + + +  +        ++ ++ Q          E  I       R+  
Sbjct: 348 DLEMAFNEHYHEVMEFIEKLFLYIFKTIREKYAKQVAVVRQQYPSEDFILPDADRIRFHF 407

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF----SRILIEKIEPNLGINCC 235
            D    L       + +   +  +       +D   D F     R L + +      +  
Sbjct: 408 KDAVKLLKEAGYRKQLVPGQKVPEDEEFHYCEDPEFDDFSTPEERALGQIVREKYHTD-F 466

Query: 236 TILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            ++D+YP+          P DPR++  ++ +    E+ +    + DP     R       
Sbjct: 467 YVIDKYPSSVRPFYTMPDPEDPRYSNSYDFFMKGQEIMSGAQRIHDPELLVER------M 520

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           K    +    + + ++       P  +G  +G +R+VM      NI      P  
Sbjct: 521 KALGVSPDVGL-QQYIDAFAIGCPPHAGGGIGLERVVMFYLNLPNIRLASSFPRD 574


>gi|33152476|ref|NP_873829.1| asparaginyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|59798581|sp|Q7VLL7|SYN_HAEDU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|33148699|gb|AAP96218.1| asparaginyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 467

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 106/357 (29%), Gaps = 45/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R  L       R+ +  ++  +F    F  + +  +  S       +        
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFNGQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 60  -RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                TE    D+      K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRTEHGKIDYSQDFFGKEAFLTVSGQLNGESYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++   +   ++             + E IT  E 
Sbjct: 245 LAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHIDK-EVITRLEN 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F                Q D         ++G +      W    S      +      +
Sbjct: 304 F----------IAAPFAQVDYSDAIEILLKSGKKFEFPVAWGVDLSSEHERFLAEEHFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R    + 
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLAVLDS 406

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  +   N     D  +   L        +G  +GF+RL++ VTG  NI EVI  P 
Sbjct: 407 RMIEMGLNPE---DYWWYRDLRKYGTVPHAGFGLGFERLIVYVTGLQNIREVIPFPR 460


>gi|320120337|gb|EFE28440.2| asparagine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 469

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 105/357 (29%), Gaps = 45/357 (12%)

Query: 15  HYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R++   ++ ++F E  F+ +++  +  S       +  F      
Sbjct: 129 HLRPRGNTYAAVFRVRSIAAYAIHKFFQERNFVYVNTPIITGSDAEGAGEM--FHVTTFD 186

Query: 69  QD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
            +             K  +     L  S +    +  A   + I+ F   +R+       
Sbjct: 187 FNNIPKNSDNSIDYTKDFFKKSTNLTVSGQL-EGECYALAYKNIYTFGPTFRSENSNTAR 245

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M     +I+   +                F+      + +
Sbjct: 246 HAAEFWMIEPEIAFSDLNGYMDLAEEMIKFIIDYV----LEHAPEEMEFFNSFIDKGLLD 301

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                A+ D                    Q++  +  +   W           +   +  
Sbjct: 302 RLNHVASSDFKRITYTE-------AVELLQKSDKKFEYPIEWGSDLQTEHERYLTEEVFK 354

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
                +  YP    A       D +     +L    I       E++   ++  R     
Sbjct: 355 KPL-FVTDYPKDIKAFYMRINDDNKTVAAADLLVPGI------GEIIGGSQREERLNVLS 407

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  K I          ++        + +G  +GF+R++M +TG +NI +VI  P +
Sbjct: 408 ERMKDIGLNEDDY-WWYMELRKYGGVKHAGYGLGFERMIMYLTGMSNIRDVIPFPRT 463


>gi|313884140|ref|ZP_07817906.1| asparagine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620587|gb|EFR32010.1| asparagine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 432

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 65/351 (18%), Positives = 109/351 (31%), Gaps = 45/351 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  ++  EN+FI++D   L   +P         
Sbjct: 115 MDHRHLWLRSS--RQHAIMQIRNEIIRATYQFMAENEFIKVDPPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTELFHTKYFEEDAYLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMME 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E+ ++     +        +                      E   +Y  + 
Sbjct: 225 PEMAFVEHEESLQVQEKYVAYLVRNVIEHCQLALKTLERD---------IEQLEKYTQLP 275

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++ G     D  W D F       I           +  Y
Sbjct: 276 YPRISYTD-------AISLLKKNGFE---DIEWGDDFGSPHETFIANQY--EKPVFILNY 323

Query: 242 PAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P DPR     +L A          E++   E+   +E   E  EK  +
Sbjct: 324 PKGIKPFYMKINPEDPRTVLCADLIAP-----EGYGEIIGGSEREVDYETLAENIEKFGL 378

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +TY     +L          SG  +G +R V  ++G  +I E    P  
Sbjct: 379 DLDTY---AWYLDLRKYGTVPHSGFGIGLERTVAWLSGIEHIRETAPFPRL 426


>gi|189202702|ref|XP_001937687.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984786|gb|EDU50274.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 551

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 114/341 (33%), Gaps = 30/341 (8%)

Query: 13  DFHYR-RRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQD 70
           D   +  +   + ++ + +  +E+  +  F+ + +   L  +     +       +    
Sbjct: 230 DLRAKINQAIFVIKSGVCALFQEFLSKKGFVLVHTPKILGAASEGGAN-------VFELK 282

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESY 129
           +  +P YL  SP+F  + L+A+  +K+      +R        H  EFT L+     +  
Sbjct: 283 YFGRPAYLAQSPQFYKQMLIASRFQKVMEIGPVFRAENSNTARHLTEFTGLDLEMEFQEN 342

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              +   +  +           F F  +N     E E +        +   + G     P
Sbjct: 343 YHEVMGVLEDLML---------FIFNELNTRYKKETELVRGVYHIDEFKLPESGKVPRIP 393

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA-L 248
            Q    +L    ++ G      D  +    + L   +      +    LD++P       
Sbjct: 394 FQEGIKMLREAGEELG----DYDDLTTPQEKKLGRLVLEKYNTD-FYTLDQFPLAIRPAY 448

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
               PADP  +  ++++    E+C+    + D          +M++     +      +D
Sbjct: 449 TMPSPADPALSNSYDMFMRGQEICSGAQRIHDS----ALLADQMRKHDPPIDPAGAGTKD 504

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++ C     P  +G   G +R+V    G  NI      P  
Sbjct: 505 YVDCFKYGCPPHAGGGFGLERIVQFWLGLPNIRMCSLFPRD 545


>gi|158321362|ref|YP_001513869.1| asparaginyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|166980084|sp|A8MJ91|SYN_ALKOO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|158141561|gb|ABW19873.1| asparaginyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 463

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 101/357 (28%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+   +  +  S       +   +T   
Sbjct: 122 AHLRPRSNTFSAVFRVRSLAAFAIHQFFQERGFVYTHTPIITGSDAEGAGEMFRITTLDP 181

Query: 68  IQDHIR--------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLH 113
               +         K  +     L  S +   +    A    I+ F   +R        H
Sbjct: 182 KNPGLNEAGEVDFTKDFFGKETSLTVSGQLQGEAYALA-FRNIYTFGPTFRAENSHTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M+    +++                    F+      + + 
Sbjct: 241 ASEFWMIEPEIAFADLQDNMELAEEMLKYIINYV----MENAPEEMEFFNSFVDKGLLDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               A  D G                  Q++G    +   W           +   +   
Sbjct: 297 LNNVATSDFGRVTYTE-------AIEILQKSGETFEYPVAWGTDLQTEHERYLTEKVFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +     +L    I E+        +      R +   
Sbjct: 350 PV-FVTDYPKDIKAFYMKLNEDGKTVAAMDLLVPGIGEIIGGSQREDNLALLEERMDAM- 407

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +  E Y     +L        + +G  +GF+R +M +TG +NI +VI  P +
Sbjct: 408 ----GLDKEEY---WWYLELRKYGSARHAGYGLGFERAIMYLTGMSNIRDVISFPRT 457


>gi|198277517|ref|ZP_03210048.1| hypothetical protein BACPLE_03739 [Bacteroides plebeius DSM 17135]
 gi|198270015|gb|EDY94285.1| hypothetical protein BACPLE_03739 [Bacteroides plebeius DSM 17135]
          Length = 467

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 109/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPLITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIIYDNDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A    +       + F +         
Sbjct: 242 LAEFWMIEPEVAFNDINDNMDLAEEFIKYCVQWALDNCYDDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +   + +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLQGVLKESFVRLPYTEGIKIL-EEAVANGHKFEFPVYWGVDLASEHERFLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLLTRIQEL 411

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 NIPMKDM--------WWYLDTRKYGSCPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 461


>gi|218961042|ref|YP_001740817.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Candidatus Cloacamonas acidaminovorans]
 gi|167729699|emb|CAO80611.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Candidatus Cloacamonas acidaminovorans]
          Length = 431

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 120/351 (34%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   L  R+ +  ++  Y  E+ FI  DS  L        +    +
Sbjct: 115 LSNRHLWIRS--QKQWAILRIRHTVYYAICNYLNEHNFIRFDSPILTP------NACEGT 166

Query: 64  TELIIQDHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL-HQPEFTMLE 121
           T L   D+  +   YL  S +   +  + +   +++ F   +R        H  EF M++
Sbjct: 167 TTLFELDYFDEGKAYLSQSGQLYLETGIMS-FGRVYDFGPVFRAERSKTRKHLTEFWMMD 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +++ M+   ++IR        +      +                        
Sbjct: 226 AEAAFVEHDENMQIQEDLIRYVIRTVLSECALELQILERNT------------------- 266

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
              +L   D P + + + +A +   +   D T S          +  +  +     ++R+
Sbjct: 267 --ESLKAADAPFKRMTHYEAVELLRQKGSDITHSKDLGAQDEVLLTEDSEV--PVFVERW 322

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +      P +P      +L A          EL+   ++   +E  +   +    
Sbjct: 323 PKEIKAFYMKRDPLNPNLVLGDDLIAP-----EGFGELIGGSQREDDYELLLSRMQA--- 374

Query: 301 ETYPID--EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E  PID  + FL          SG  +G +RLV  ++G  +I E I  P  
Sbjct: 375 ENMPIDDYQWFLDLRKYGSVPHSGFGVGLERLVAWLSGTPHIRETIPFPRM 425


>gi|167624184|ref|YP_001674478.1| asparaginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083479|sp|B0TUU1|SYN_SHEHH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|167354206|gb|ABZ76819.1| asparaginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 466

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 112/356 (31%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  +       RN +  ++  ++ E  +I + +  +  S       +   ST  +
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYNEQGYIWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDKGTVDYSEDFFGKESFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + +   K   ++++   +   ++    +  +   F++    T  E 
Sbjct: 244 LAEFWMVEPEVAFANLDDAAKLAEDMLKYCFKAVLEE----RRDDLEFFAQRVEKTAIER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + + D         Q D        +       +D  W           +       
Sbjct: 300 LEAFVSSDFA-------QIDYTDAIEILKACDKDFEYDVEWGIDLHSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R   ++ 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGAQREERL--DVL 403

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + +    E    D  +   L        +G  +GF+RLV  VTG +NI +VI  P 
Sbjct: 404 DARLAEMELSQEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPR 459


>gi|149719602|ref|XP_001492609.1| PREDICTED: similar to MGC152259 protein [Equus caballus]
          Length = 477

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 53/347 (15%), Positives = 104/347 (29%), Gaps = 34/347 (9%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIR----AFST 64
           H R R       L  R+   +++  +F ++ F+ I +  +  +       +     +   
Sbjct: 144 HLRCRTNVLGSILRVRSEATAAIHSFFKDSGFVHIHTPIITSNDCEGAGELFRVEPSSKV 203

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           ++  ++    P +L  S +    ++++    ++F F   +R        H  EF M+E  
Sbjct: 204 KVPEENFFNVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAE 262

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +     Q +   M  +   A +            C+ F  P      E   +       
Sbjct: 263 ISFVESLQDLMQVMERLFKTATMLVLSNCPEDIELCHRFIAPGQKDRLEHMLK------- 315

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
              +N             +QA         W         + +  + G     ++  YP 
Sbjct: 316 ---NNFLIISYTEAVEILKQASQNFTFTPEWGVDLHTEHEKFLVKHCGNIPVFVV-NYPL 371

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR--FEKEMQEKKKIYNE 301
                      D        +      L     EL     +  R  F ++   +     E
Sbjct: 372 ALKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGSLREERYHFLEQRLAR-SGLTE 426

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            Y     +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 427 AYQ---WYLDLRRFGSVPHGGFGMGFERYLQCILGIDNIKDVIPFPR 470


>gi|330910710|gb|EGH39220.1| asparaginyl-tRNA synthetase [Escherichia coli AA86]
          Length = 466

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 109/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LERFIEADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  ++
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDV 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMLEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|315504462|ref|YP_004083349.1| tRNA synthetase class ii (d k and n) [Micromonospora sp. L5]
 gi|315411081|gb|ADU09198.1| tRNA synthetase class II (D K and N) [Micromonospora sp. L5]
          Length = 428

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 60/339 (17%), Positives = 102/339 (30%), Gaps = 44/339 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H  R   L       S  R       F+E+ +  +  S   E+    F       D   
Sbjct: 124 RHPVRSAALRISAAAVSGFRATLDGRGFVEVHTPKVVAS-STESGANVF-----ALDWFG 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAH-ESYEQ 131
           +P YL  SP+F  K+L+    E+++     +R        H  ++T L+        +  
Sbjct: 178 RPAYLAQSPQFY-KQLMVGVFERVYEVGPVFRAEPHDTVRHLAQYTSLDVELGFVADHRD 236

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M      +        ++                 +TV E  A    +     L     
Sbjct: 237 VMAVLRETLAGMVATVGERAGGALATLG--------VTVPEVPAEIPAVHFTDAL----- 283

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
               +    A +  +  AH+    +   R                 +  YP  +     +
Sbjct: 284 ---KIAGAPADEPDLAPAHERALGEWALREHGC---------DFLFVTGYPMAKRPFYTH 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             PA P ++  F+L    +EL      L        R    +           P    ++
Sbjct: 332 PDPARPAYSNGFDLLFRGVELVTGGQRLH-------RHADYLAALAARGEPVEPY-AGYV 383

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G A+G +R V  +TGA N+ EV   P  
Sbjct: 384 DAFRHGMPPHGGFAIGLERFVARLTGAANVREVTAFPRD 422


>gi|160878794|ref|YP_001557762.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|160427460|gb|ABX41023.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 445

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 49/339 (14%), Positives = 111/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
            + R R     +  I    R++     F E+ +  +   +     +       +   ++ 
Sbjct: 137 RNIRERAIFKIQEGIVRGFRDFLFSEHFTEVRTPKIVAGNAEGGAN-------VFKLEYF 189

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            K  +L  SP+F  K+ +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 190 GKKAFLAQSPQFY-KQTMVGVYDRVFEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDSFE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            + +    +         K +  +                        I+L  T   P  
Sbjct: 249 DIMNMETAMLTFIFELLSKDYKKEC-------------------EILGINLPKTDKIPAV 289

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  L +++   ++ +          ++    +     +    +  YP+ +     +
Sbjct: 290 RFDEAKQLVSEKYDRKIKNPFDLEPEEEVLIGRYFKEEYDSD-FVFVTHYPSKKRPFYAM 348

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               D RFT  F+L    +E+      + +  EQ  + +      + +  E +   E +L
Sbjct: 349 DDPSDKRFTLSFDLLFKGMEITTGGQRIHNYEEQVAKMKD-----RGMNIEDF---EHYL 400

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G+ +G +RL M +    N+ E    P  
Sbjct: 401 MIHKHGMPPHGGLGIGLERLTMRLLEEANVRETSLFPRD 439


>gi|303250422|ref|ZP_07336620.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252225|ref|ZP_07534122.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256694|ref|ZP_07538473.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|302650748|gb|EFL80906.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860147|gb|EFM92163.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306864742|gb|EFM96646.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 467

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 108/357 (30%), Gaps = 45/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRTEEGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++   +   ++             + + IT  E 
Sbjct: 245 LAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHIDK-DVITRLEN 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F                Q D         ++G       +W    S      +      +
Sbjct: 304 F----------IASPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 406

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  +   N     D  +   L        SG  +GF+RL++ VTG  NI EVI  P 
Sbjct: 407 RMVEMGLNPE---DYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPR 460


>gi|114565508|ref|XP_001150144.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 5
           [Pan troglodytes]
          Length = 594

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 56/381 (14%), Positives = 113/381 (29%), Gaps = 69/381 (18%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 187 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGA---KEFLVPSREPGKF---YSLP 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300

Query: 140 IRCAAEVANQK---------------IFSFQNVNCNPFSEPEYITVAEAFARYAN----- 179
           ++ +                       +     +     +   I+               
Sbjct: 301 LQYSWPNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMKIIDISDVFRNTEIGFLQDAL 360

Query: 180 ---------IDLGTTLDNPDQPDRHLLYLQAQQAGIRVA--------------------H 210
                    I +        + D   +   A     + +                     
Sbjct: 361 SKPHGTVKAICIPEGAKYLKRKDIESIRKFAADHFNQCSLLGKLRLECADLLETRGVVLR 420

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY----PADPRFTKRFELYA 266
           D T       +      P            +P      ++I+          ++ ++L  
Sbjct: 421 DPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVL 480

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMG 325
              E+      + +   QR+     ++       E   +    L  L    P   GIA+G
Sbjct: 481 NGNEIGGGSIRIHNAELQRYILATLLK-------EDVKMLSHLLQALDYGAPPHGGIALG 533

Query: 326 FDRLVMLVTGANNINEVIWTP 346
            DRL+ LVTG+ +I +VI  P
Sbjct: 534 LDRLICLVTGSRSIRDVIAFP 554


>gi|15800791|ref|NP_286805.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15830267|ref|NP_309040.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168751196|ref|ZP_02776218.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168757025|ref|ZP_02782032.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168762930|ref|ZP_02787937.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168769928|ref|ZP_02794935.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168776214|ref|ZP_02801221.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783976|ref|ZP_02808983.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168787362|ref|ZP_02812369.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|195939655|ref|ZP_03085037.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208815310|ref|ZP_03256489.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208822648|ref|ZP_03262967.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209397026|ref|YP_002269602.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217325811|ref|ZP_03441895.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254792130|ref|YP_003076967.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261227434|ref|ZP_05941715.1| asparaginyl tRNA synthetase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256143|ref|ZP_05948676.1| asparaginyl tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281931|ref|YP_003498749.1| Asparaginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|20139877|sp|P58694|SYN_ECO57 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|12514105|gb|AAG55415.1|AE005283_2 asparagine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13360472|dbj|BAB34436.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187768340|gb|EDU32184.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188014709|gb|EDU52831.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188998770|gb|EDU67756.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189355907|gb|EDU74326.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189361160|gb|EDU79579.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189366782|gb|EDU85198.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189372735|gb|EDU91151.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|208731958|gb|EDZ80646.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208738133|gb|EDZ85816.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209158426|gb|ACI35859.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209774698|gb|ACI85661.1| asparagine tRNA synthetase [Escherichia coli]
 gi|209774700|gb|ACI85662.1| asparagine tRNA synthetase [Escherichia coli]
 gi|209774702|gb|ACI85663.1| asparagine tRNA synthetase [Escherichia coli]
 gi|209774704|gb|ACI85664.1| asparagine tRNA synthetase [Escherichia coli]
 gi|209774706|gb|ACI85665.1| asparagine tRNA synthetase [Escherichia coli]
 gi|217322032|gb|EEC30456.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254591530|gb|ACT70891.1| asparaginyl tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290761804|gb|ADD55765.1| Asparaginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320192584|gb|EFW67225.1| Asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320637799|gb|EFX07591.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320642924|gb|EFX12125.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320648381|gb|EFX17036.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320653697|gb|EFX21771.1| asparaginyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320659842|gb|EFX27398.1| asparaginyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320664311|gb|EFX31462.1| asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326338175|gb|EGD62004.1| Asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346152|gb|EGD69890.1| Asparaginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
          Length = 466

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LERFIEADFAQV-------DYTEAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R  +  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|322373087|ref|ZP_08047623.1| asparagine--tRNA ligase [Streptococcus sp. C150]
 gi|321278129|gb|EFX55198.1| asparagine--tRNA ligase [Streptococcus sp. C150]
          Length = 448

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 119/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++      RN I  +  ++F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAIQQIRNAIIYATYDFFDKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQK--------IFSFQNVNCNPFSEPEYITVAEAF 174
             +  S+++ +      ++   +    +              +        + ++  EA 
Sbjct: 236 EYSFLSHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I    G+  
Sbjct: 295 -----IDLLQAHENDEDTDYEHLE---------------HGDDFGSPHETWISNYFGV-- 332

Query: 235 CTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA  ++      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  ++  +     E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMDELGMDRTEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|6094394|sp|O24822|SYD_HALVO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3298338|dbj|BAA31457.1| aspartyl tRNA synthetase [Haloferax volcanii]
          Length = 433

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/364 (15%), Positives = 118/364 (32%), Gaps = 53/364 (14%)

Query: 3   QIPSQPWW----NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMS 48
           Q+P  P              R               R  +Q ++R+ F + +  EI++  
Sbjct: 101 QLPLDPSGKVDAELSTRLDNRTLDLRKDEVKAIFEIRAEVQRAVRDKFRDLRATEINTPK 160

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +  + G E       TEL    +  +  ++  SP+   + ++ +G E++F     +R  E
Sbjct: 161 IVAT-GTEGG-----TELFPITYFGQEAFMNQSPQLFKQLMVGSGLERVFEVGPIFRAEE 214

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H  E T +++  A   + + M  C  ++  A E   +                  
Sbjct: 215 HNTPRHLNEATSIDFESAFIDHTEAMDVCEAVVTAAYEAVEENCQDELEALGLEEEFERR 274

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
             V  A  R  +                    +A Q    +     W D       + + 
Sbjct: 275 PRVPAAHLRGGH--------------------RAHQRTGELDEQLVWGDDLPTEGEKALG 314

Query: 228 PNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
            ++G      +  +P+         +  D   +  F++   N+EL +             
Sbjct: 315 EDVGE--HYFITDWPSEIKPFYIKDHDDDETLSTGFDMMHPNMELVSGGQREHRFDHLVA 372

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FE++      +  + +     +       MP  +G  +G +RL+M + G  NI E +  
Sbjct: 373 GFEQQ-----GLDPDAFEY---YTKMFKYGMPPHAGFGLGGERLIMTMLGLENIREAVLF 424

Query: 346 PFSQ 349
           P  +
Sbjct: 425 PRDR 428


>gi|18312116|ref|NP_558783.1| aspartyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|62287581|sp|Q8ZYM8|SYD_PYRAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|18159548|gb|AAL62965.1| aspartyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 428

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 67/363 (18%), Positives = 118/363 (32%), Gaps = 60/363 (16%)

Query: 3   QIPSQPWW---NRDFHYRRRPFLLKR----------NMIQSSLREYFVENQFIEIDSM-S 48
            +P   W    +     + R   LKR          + +  S+RE      F+E+ +   
Sbjct: 105 PLPIDIWSETPDLATRLKWRSVDLKRPRNLVVFTVASAMLRSIREVLYGEGFVEVFTPKI 164

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +  S      +           +  +  YL  SP+   K+ L A  E++F    A+R  +
Sbjct: 165 IVTSTEGGAELFPVM-------YFERVAYLSQSPQLY-KEQLTASLERVFEIGPAYRAEK 216

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H  EF  ++   A   Y  +M     I+R  A                       
Sbjct: 217 HNTDYHLNEFISVDAEAAFMDYNDIMDILEKIMRRLASTV-------------------- 256

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            +          I     L N  + D      + +Q G  V     W D F+  + + + 
Sbjct: 257 -SEYAPKLEEVGIKALMELSNIPRVDYDEAVDRLRQLGYAV----NWGDDFTVEMQKALM 311

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
              G      +  +PA           D   ++ ++L    IE+ +    +        R
Sbjct: 312 KYYG--PVYFIVNFPASLRPFYT-KRKDGEKSESYDLIINGIEVASGATRIH------KR 362

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E E + KK+  +      E  L+     MP  +G  +GF+RLV  + G +N+      P
Sbjct: 363 DELEEEMKKRGLDPRLF--ESHLSVFDYGMPPHAGFGLGFNRLVTALLGLDNVRHATLYP 420

Query: 347 FSQ 349
             +
Sbjct: 421 RDR 423


>gi|296216963|ref|XP_002754814.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           [Callithrix jacchus]
          Length = 477

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 53/347 (15%), Positives = 104/347 (29%), Gaps = 34/347 (9%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIR----AFST 64
           H R R       L  R+   +++  +F +N F+ I +  +  +       +     A   
Sbjct: 144 HLRCRTNILGSILRIRSEATAAIHSFFKDNGFVHIHTPIITSNDCEGAGELFQLEAAGKI 203

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           ++  ++    P +L  S +    ++++    ++F F   +R        H  EF M+E  
Sbjct: 204 KIPEENFFNVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAE 262

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +     Q +   M  +  A  +            C  F  P      E   +       
Sbjct: 263 ISFVDSLQDLMQVMEKLFKATTMMVLSNCPEDVKLCYKFIAPGQKDRLEHMLK------- 315

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
              +N             ++A         W         + +  + G      +  YP 
Sbjct: 316 ---NNFLIISYTEAVEILKRASQNFTFTPEWGIDLQTEHEKYLVKHCGSIPV-FVINYPL 371

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR--FEKEMQEKKKIYNE 301
                      D        +      L     EL     +  R  F +E   + ++   
Sbjct: 372 ALKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGGLREERYHFLEERLARSRLTE- 426

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              + + +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 427 ---VYQWYLDLRRFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 470


>gi|82777546|ref|YP_403895.1| asparaginyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|331682441|ref|ZP_08383060.1| asparagine--tRNA ligase [Escherichia coli H299]
 gi|123742114|sp|Q32E51|SYN_SHIDS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|81241694|gb|ABB62404.1| asparagine tRNA synthetase [Shigella dysenteriae Sd197]
 gi|331080072|gb|EGI51251.1| asparagine--tRNA ligase [Escherichia coli H299]
          Length = 466

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 109/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LERFIEADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  ++
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDV 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMLEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|152978960|ref|YP_001344589.1| asparaginyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704331|sp|A6VNV7|SYN_ACTSZ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|150840683|gb|ABR74654.1| asparaginyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 467

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 114/361 (31%), Gaps = 53/361 (14%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRTQAGTVDFNQDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++                        E     E 
Sbjct: 245 LAEFWMVEPEIAFATLADNAKLAEDMLKYVFNAVLT----------------ERRDDLEF 288

Query: 174 FARYANIDLGTTLDNPD-----QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           F+++ + D+ T L++       Q D         ++G +     +W    S      +  
Sbjct: 289 FSKHVDKDVITRLEHFVNSPFAQIDYTDAIDVLVKSGKKFEFPVSWGIDLSSEHERYLAE 348

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +   +   YP    A       D +             L     E++   ++  R 
Sbjct: 349 EHFKSPVVVK-NYPKGIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERL 401

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +   +   ++  +  P D  +   L        SG  +GF+RL++ VTG  NI +VI  P
Sbjct: 402 DVLDKRMVEMGLK--PEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGVQNIRDVIPFP 459

Query: 347 F 347
            
Sbjct: 460 R 460


>gi|301167077|emb|CBW26656.1| asparaginyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 470

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 100/358 (27%), Gaps = 41/358 (11%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE-- 65
             H R R          R+ +  +   +F    F  ++S  +      E     F     
Sbjct: 124 QAHLRVRTNTFGAVFRIRHELAQATHRFFSNQGFYYLNSPIITSVD-GEGAGEMFRVSGL 182

Query: 66  -------------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
                           +D+  K   L  + +    +  A+G   I+ F   +R       
Sbjct: 183 DAKNPPLNDAGEVDFTKDYFGKETSLCVTGQL-EGECFASGLGAIYTFGPTFRAENSNTP 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    + + K   + I+       +      N   N        +  
Sbjct: 242 RHLSEFWMIEPEVAFADLDDVAKLAGDYIQYMISEVLKNCEDEMNFLVNRHGGNLDESHL 301

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      +                        +G       TW +         +     
Sbjct: 302 EMLKLVRDTPFTKITYTE-------AIDILNASGESFEFPTTWGNELQTEHERFLAEKHF 354

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                I+  YPA   A       D +  +  ++    + E+        D  +   + + 
Sbjct: 355 KGPV-IVTDYPADCKAFYMKQNPDGKTVRAMDVLVPGVGEIIGGSQREEDYDKIVAKMD- 412

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               K  +  E Y     +L          +G  +GF+R +M +TG +NI +VI  P 
Sbjct: 413 ----KDDMDKEGY---WWYLDLRKYGSVPHAGFGLGFERAIMYITGMSNIRDVIPFPR 463


>gi|322516976|ref|ZP_08069866.1| asparagine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322124459|gb|EFX95954.1| asparagine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 448

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 119/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++      RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVQQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQK--------IFSFQNVNCNPFSEPEYITVAEAF 174
             +  S+++ +      ++   +    +              +        + ++  EA 
Sbjct: 236 EYSFLSHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I    G+  
Sbjct: 295 -----IDLLQAHENDEDTDYEHLE---------------HGDDFGSPHETWISNYFGV-- 332

Query: 235 CTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA  ++      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPASFKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSMREDDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  ++  +     E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMDELGMDRSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|255660164|ref|ZP_05405573.1| aspartyl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 556

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 68/415 (16%), Positives = 116/415 (27%), Gaps = 98/415 (23%)

Query: 16  YRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RRR     LL R+    ++R +F +  FIEI++ +L   +P      + F     I+  
Sbjct: 126 LRRRLMQKRLLLRHQFILAIRNWFNQQGFIEIETPTLSKSTPEG---AQDFLVPARIRK- 181

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ AG EK F  A  +R+ +     QPE T +++  +  + + 
Sbjct: 182 -DCFYALVQSPQIYKQLLMIAGVEKYFQIARVYRDEDSRKDRQPEHTQIDFEISFCNQKM 240

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA------------- 178
           +M     +         Q                E     +   RY              
Sbjct: 241 IMNLVEKLFFSVFLDVFQIKIKKTFPVFKFSELFERFGSDKPDLRYGFEIKDFTSLFQDH 300

Query: 179 -----------NIDLGTTLDNPDQPDRHL--LYLQAQQAGI------------------- 206
                       I  G  L N +     +  L   A+   +                   
Sbjct: 301 QNQFTKLIEAKGIIGGIELTNIELSTDKIKALRKIAKDHDVSLEVHNKNNSTLKTSIKCD 360

Query: 207 ------------RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP---------APE 245
                       +         I + +                +  +P            
Sbjct: 361 EKNTLLLVANKSKKKAWTALGAIRNELKYHLDIVKPNQYSFCWVVDFPLYDFDEKTNQWI 420

Query: 246 SALANIYPADPRFTKRF------------ELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
           S           +   F            +L     E+ +    + DPI Q+        
Sbjct: 421 SNHNIFSKPKQEWIDNFESNKNEALSEQFDLVLNGFEIGSGSIRINDPIVQKRLMNSLNI 480

Query: 294 E--KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +  K     E Y             P   G+ +G DRL+M++   +NI EVI  P
Sbjct: 481 DPNKFAFLLEAYQ---------YGAPVHGGMGLGIDRLMMILNQTDNIREVIAFP 526


>gi|229085162|ref|ZP_04217409.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228698143|gb|EEL50881.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 432

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 109/341 (31%), Gaps = 44/341 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R +     ++ +  +  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERIQAIFTIQSTLVQAFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    N++R   E   QK                         +   + +    + P  
Sbjct: 238 VMALEANVLRHMFEQVEQKCKKE--------------------LKLLQVTVPIITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++   G +    +  YP     +   
Sbjct: 278 TLAEAQRILKTKYKKESPAGDLDTEG-EKLLGKYVKETYGSD-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI---YNETYPIDE 307
               +   T  F+L    +E+ +    + D       F      K+K     N    ID 
Sbjct: 336 PNRENQEVTDSFDLLYKGLEITSGAQRIHDYDMLLSSF------KEKGLHSGNFQSYID- 388

Query: 308 DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                    P   G  +G +RLV      +N+ E    P  
Sbjct: 389 ---TFRYGCPPHGGFGIGLERLVYKFLELSNVREASAFPRD 426


>gi|189502178|ref|YP_001957895.1| asparaginyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189497619|gb|ACE06166.1| hypothetical protein Aasi_0788 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 477

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 53/363 (14%), Positives = 109/363 (30%), Gaps = 38/363 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ I  ++ ++F E  F+ + +  +          + + +T   
Sbjct: 119 AHLRFRTNTFSAVFRIRHAISYAIHQFFHEQGFVYLHTPIITAVDAEGAGEMFSVTTLNM 178

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   +   L  S +    +  A G  +++ F   +R        H
Sbjct: 179 EQLPKTPQGQVDFKRDFFGQKTSLTVSGQL-EAEAAALGLAEVYTFGPTFRAENSNTTRH 237

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +      ++     A +              +   +     
Sbjct: 238 LAEFWMVEPEMAFYDLADNIALAERFLKYVIGFALEHCKDDLEFLQKRELD-ARVGKQTD 296

Query: 174 FARYANIDLGTTL--------DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +    +D    +           +  D        ++       D+   D+ S      
Sbjct: 297 KSFLPLLDRLDNILTYPFACISYTEAIDILKASQPNKEKKFAYPIDEWGCDLQSEHERYL 356

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E +       I+  YP    A       D +     ++    I       E++   ++ 
Sbjct: 357 VEKH--FTKPVIITNYPRAIKAFYMHQQEDGKTVAAMDILFPGI------GEIIGGSQRE 408

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            R +K  +  + +   +  +       L      SG  +G +RLV  VTG +NI +VI  
Sbjct: 409 ERLDKLTEAIQSMGMNSNILQWYLDTRLFGTVPHSGFGLGLERLVQFVTGMDNIRDVIPF 468

Query: 346 PFS 348
           P +
Sbjct: 469 PRT 471


>gi|229150439|ref|ZP_04278655.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228632932|gb|EEK89545.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 432

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYIFQQVAKKC--------------------EIELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 336 QNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASFKE-----KGLHPEKFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|237730893|ref|ZP_04561374.1| asparaginyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906432|gb|EEH92350.1| asparaginyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 478

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 109/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 137 AHMRPRTNMIGAVARVRHTLAQALHRFFHEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 196

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 197 ENLPRNDQGKVDFDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 255

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A      +      +++ A +    +    +  +   F+E         
Sbjct: 256 LAEFWMLEPEVAFADLNDVAGLAEAMLKYAFKAVLAE----RADDMKFFAERVDKDAISR 311

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G +  +   W    S      +       
Sbjct: 312 LERFIDADFAQV-------DYTDAVSILEKCGKQFENPVYWGVDLSSEHERYLAEEHFKA 364

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 365 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 417

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 418 RMLEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 472


>gi|169844083|ref|XP_001828763.1| aspartate-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|116510134|gb|EAU93029.1| aspartate-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 543

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 106/333 (31%), Gaps = 30/333 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     +  I    R+Y  ++ FIEI S  LQ +   E+    F       +      +L
Sbjct: 232 QAIFKLQGAIGDLFRDYLRQHGFIEIHSPKLQGAA-TESGASVFKVGYFKGNA-----FL 285

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+ + +  +AA  E+++     +R  +     H  EF  L+   A E +   + + +
Sbjct: 286 AQSPQLAKQMAIAADFERVYEIGPVFRAEDSNTHRHLTEFIGLDLEMAIEEHYHEVMEML 345

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +        +  +  +          E     E              +   +      
Sbjct: 346 DGMLVNIFRGLRDQYKDELDVVRKQFPAEEFKWREGP------------EGTLKMTFKEA 393

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
                + G+     D  +    + L   I+    I+   I+D++P           P DP
Sbjct: 394 VDLLVEDGVPREDLDDINTENEKRLGRIIKAKYDID-YYIIDKFPMALRPFYTMPDPEDP 452

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
             +  ++ +    E+ +    + DP           + + K           ++      
Sbjct: 453 TLSNSYDFFMRGEEILSGAQRIHDPTLLCE------KMRSKGVEPDSMKP--YVDAFRLG 504

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P   G  +G +R++ML    NN+      P  
Sbjct: 505 CPPHGGGGIGLERVLMLFLKLNNVRRASLFPRD 537


>gi|189461542|ref|ZP_03010327.1| hypothetical protein BACCOP_02201 [Bacteroides coprocola DSM 17136]
 gi|189431748|gb|EDV00733.1| hypothetical protein BACCOP_02201 [Bacteroides coprocola DSM 17136]
          Length = 467

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 107/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPLITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIIYDNDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A    +       + F +         
Sbjct: 242 LAEFWMIEPEVAFNDINDNMDLAEEFIKYCVQWALDNCYDDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +     +  P      +L   A   G +      W  D+ S      +E +   
Sbjct: 295 IERLQGVLKEEFVRLPYTEGVKIL-EDAVAKGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLLTRIQEL 411

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 NIPMKDM--------WWYLDTRKYGSCPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 461


>gi|120599027|ref|YP_963601.1| asparaginyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|146292902|ref|YP_001183326.1| asparaginyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166231676|sp|A4Y6E4|SYN_SHEPC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166232737|sp|A1RK52|SYN_SHESW RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|120559120|gb|ABM25047.1| asparaginyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|145564592|gb|ABP75527.1| asparaginyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 466

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 107/358 (29%), Gaps = 47/358 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  +       RN +  ++  ++ E  FI + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEM--FRVSTL 182

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                            D   K  +L  S + + +    A   KI+ F   +R       
Sbjct: 183 DMENLPRTSEGKVDYDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A  +   +      +++ A         + +  +   F++    TV 
Sbjct: 242 RHLAEFWMVEPEVAFATLSDIAGLAEAMLKYAFNAV----LTERMDDLQFFAQHVDKTVI 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E    + + D           D        Q+ G       +W    S      +     
Sbjct: 298 ERLQSFVSSDFAQV-------DYTDAVDILQKCGKTFEFPVSWGIDLSSEHERYLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 403

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                ++       D  +   L        +G  +GF+RLV  VTG +NI +VI  P 
Sbjct: 404 DMRLAEMDL--NKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPR 459


>gi|20139921|sp|Q9CN06|SYN_PASMU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
          Length = 467

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 113/361 (31%), Gaps = 53/361 (14%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRDDKGAVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++       +                E     + 
Sbjct: 245 LAEFWMVEPEIAFATLADNAKLAEDMLKYVFRAVLE----------------ERKDDLKF 288

Query: 174 FARYANIDLGTTLDNPDQPDRHLL-----YLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           F ++ + D+ + L+N    D   +          Q+G +     +W    S      +  
Sbjct: 289 FEKHVDNDVISRLENFINSDFAQIDYTDAIEVLLQSGKKFEFPVSWGIDLSSEHERYLAE 348

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +   +   YP    A       D +             L     E++   ++  R 
Sbjct: 349 EHFKSPVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERL 401

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +   +   ++     P D  +   L        +G  +GF+RL++ VTG  NI +VI  P
Sbjct: 402 DVLDKRMIEMGL--NPEDYWWYRDLRRYGTVPHAGFGLGFERLIVYVTGVQNIRDVIPFP 459

Query: 347 F 347
            
Sbjct: 460 R 460


>gi|326793288|ref|YP_004311109.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326544052|gb|ADZ85911.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 438

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 106/334 (31%), Gaps = 43/334 (12%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHIRKPLY 77
           R     +  + S  RE+     F ++ +  +  +      +I          D+  +  +
Sbjct: 138 RAIFKVQEGVVSGFREFMESQGFTQVHTPKIVAAGAEGGANI-------FKLDYFNQDAF 190

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+F  +  + A  +++F  A  +R  +     H  E+  L++   +      + + 
Sbjct: 191 LAQSPQFYKQTCV-AFFDRVFEIAPVYRAEKHNTSRHLNEYIGLDFEMGYIDSMYDVMEM 249

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +        +                   +  + +     + L    D P       
Sbjct: 250 ETAMIKYVMNYLE-------------------SHCKEYLDLLEVKLPIIKDIPSITFVEA 290

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA-D 255
           L L   + G     +    +    +L+ +       +    +  +PA +     +    D
Sbjct: 291 LDLIKGRGG----KNKYDLEPEDEVLLCEYAKEHWNSEFLFITHFPASKRPFYAMNDKED 346

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
            RF   F+L    +E+      + D  +Q  + ++       I  E       +L+    
Sbjct: 347 SRFALSFDLLFRGLEITTGGQRIHDYQQQVDKMKEM-----GIDPEEL---SHYLSIHKY 398

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            MP   G+ +G +R VM +    N+ +    P  
Sbjct: 399 GMPPHGGLGIGLERFVMKLLDLQNVRQASMFPRD 432


>gi|218191378|gb|EEC73805.1| hypothetical protein OsI_08509 [Oryza sativa Indica Group]
          Length = 549

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 53/335 (15%), Positives = 104/335 (31%), Gaps = 37/335 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  +++  REYF+   F+ I S  L    S G           +    +  +P 
Sbjct: 241 QAIFRIQCQVENKFREYFLSKNFVGIHSPKLIAGSSEGGAA--------VFKLQYNGQPA 292

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  +  G E++F     +R        H  EF  L+     + +   + D
Sbjct: 293 CLAQSPQLYKQMAICGGFERVFEVGPVFRAENSNTHRHLCEFVGLDAEMEIKEHYFEVCD 352

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +  A      +    +    N     E +   E   +                   
Sbjct: 353 IIDGLFVAIFKHLNENCKKELETINRQYPFEPLKYLEKTLKLTY---------------E 397

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
                 ++AG  +      +    + L   ++   G     IL RYP             
Sbjct: 398 EGIQMLKEAGTEIEPMGDLNTEAEKKLGRLVKEKYGTE-FFILYRYPLAVRPFYTMPCYD 456

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +P ++  F+++    E+ +    +  P     R  +          +   I   ++    
Sbjct: 457 NPAYSNSFDVFIRGEEIISGAQRIHLPELLTKRATEC-------GIDASTI-SSYIESFS 508

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P   G  +G +R+VML    NNI +    P  
Sbjct: 509 YGAPPHGGFGVGLERVVMLFCALNNIRKTSLFPRD 543


>gi|115447981|ref|NP_001047770.1| Os02g0686400 [Oryza sativa Japonica Group]
 gi|41052719|dbj|BAD07576.1| putative aspartate-tRNA ligase [Oryza sativa Japonica Group]
 gi|113537301|dbj|BAF09684.1| Os02g0686400 [Oryza sativa Japonica Group]
 gi|215704413|dbj|BAG93847.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623467|gb|EEE57599.1| hypothetical protein OsJ_07966 [Oryza sativa Japonica Group]
          Length = 549

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 53/335 (15%), Positives = 104/335 (31%), Gaps = 37/335 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  +++  REYF+   F+ I S  L    S G           +    +  +P 
Sbjct: 241 QAIFRIQCQVENKFREYFLSKNFVGIHSPKLIAGSSEGGAA--------VFKLQYNGQPA 292

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  +  G E++F     +R        H  EF  L+     + +   + D
Sbjct: 293 CLAQSPQLYKQMAICGGFERVFEVGPVFRAENSNTHRHLCEFVGLDAEMEIKEHYFEVCD 352

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +  A      +    +    N     E +   E   +                   
Sbjct: 353 IIDGLFVAIFKHLNENCKKELETINRQYPFEPLKYLEKTLKLTY---------------E 397

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
                 ++AG  +      +    + L   ++   G     IL RYP             
Sbjct: 398 EGIQMLKEAGTEIEPMGDLNTEAEKKLGRLVKEKYGTE-FFILYRYPLAVRPFYTMPCYD 456

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +P ++  F+++    E+ +    +  P     R  +          +   I   ++    
Sbjct: 457 NPAYSNSFDVFIRGEEIISGAQRIHLPELLTKRATEC-------GIDASTI-SSYIESFS 508

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P   G  +G +R+VML    NNI +    P  
Sbjct: 509 YGAPPHGGFGVGLERVVMLFCALNNIRKTSLFPRD 543


>gi|228477606|ref|ZP_04062239.1| asparaginyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250750|gb|EEK09948.1| asparaginyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 448

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 119/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++      RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVQQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQK--------IFSFQNVNCNPFSEPEYITVAEAF 174
             +  S+++ +      ++   +    +              +        + ++  EA 
Sbjct: 236 EYSFLSHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I    G+  
Sbjct: 295 -----IDLLQAHENDEDTDYEHLE---------------HGDDFGSPHETWISNYFGV-- 332

Query: 235 CTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA  ++      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  ++  +     E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMDELGMDRSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|145357295|ref|XP_001422855.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144583099|gb|ABP01214.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 448

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 57/371 (15%), Positives = 92/371 (24%), Gaps = 56/371 (15%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  +   +F E+ F+  ++  +  S           +T L 
Sbjct: 90  AHLRPRTNTIGAVARVRNQLAYATHTFFQEHGFLYANTPIITASDCEGAGEQFQVTTLLN 149

Query: 68  IQDH----------------------------IRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
                                             KP YL  S +    +++A     I+ 
Sbjct: 150 GFGAGEWTTPASVVDEQEAMNKDGSIDYSQDFFGKPSYLTVSGQL-NGEIMACAVNDIYT 208

Query: 100 FAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN 158
           F   +R        H  EF M+E   A       M      ++       +         
Sbjct: 209 FGPTFRAENSNTSRHLAEFWMVEPELAFADLNDDMDCAEAYLKYCLNHVLEHCDEDLEF- 267

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
                  E     +                    +     L A++   +      W    
Sbjct: 268 ------FEKNISKDNLRERLRNVASQEFARITYTEAVEHVLNAKK---KFEFPIEWGSDL 318

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDE 277
                  I   +  +   I+  YP    A        +        L     EL      
Sbjct: 319 QSEHERYISEEVFKDRPVIVRDYPKDIKAFYMRLNDDNKTVAAMDVLVPRVGELMGGSQR 378

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGA 336
                    R E+   EK+            +L          +G  +GF+RLV  VTG 
Sbjct: 379 EERLDVLERRIEEVGLEKESY--------WWYLDLRRYGSQPHAGFGLGFERLVQYVTGV 430

Query: 337 NNINEVIWTPF 347
            NI + I  P 
Sbjct: 431 ENIRDAIPFPR 441


>gi|119189367|ref|XP_001245290.1| hypothetical protein CIMG_04731 [Coccidioides immitis RS]
          Length = 937

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 53/343 (15%), Positives = 114/343 (33%), Gaps = 30/343 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     +++I S  R       FIEI +  LQ +   E+    FS       +  +P +
Sbjct: 267 SQSIFRIQSVISSYFRSTLDSMGFIEIHTPKLQGAA-TESGASVFSVR-----YFNRPAF 320

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 321 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHESLEV 380

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +              +          E +   +        +    L+         
Sbjct: 381 IDQVIKKIFEVIYGKHRREVQLIKHQFPSEDLVWLDKTPIITFSEGIRMLNESGWRTED- 439

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
               +    I    +    ++                   I+D++PA          P D
Sbjct: 440 GKELSDLEDISTRDEIRLGELV---------KEKYHTDYYIMDKFPASARPFYAMPDPND 490

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            RFT  ++++    E+ +    + +PI    R       ++   +      E+++     
Sbjct: 491 NRFTNAYDIFVRGQEIVSGGQRIHNPIMLEER------MRQMGVDPASM--EEYMEGFQW 542

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT---PFSQSNQEE 354
            +P  +G  +G +R++ML+    NI         P S   Q++
Sbjct: 543 GVPPHAGAGIGLERMLMLILKLGNIRLASMFHRDPKSFPAQDQ 585


>gi|319426567|gb|ADV54641.1| asparaginyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 466

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 107/358 (29%), Gaps = 47/358 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  +       RN +  ++  ++ E  FI + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEM--FRVSTL 182

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                            D   K  +L  S + + +    A   KI+ F   +R       
Sbjct: 183 DMENLPRTSEGKVDYDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A  +   +      +++ A         + +  +   F++    TV 
Sbjct: 242 RHLAEFWMVEPEVAFATLSDIAGLAEAMLKYAFNAV----LTERMDDLQFFAQHVDKTVI 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E    + + D           D        Q+ G       +W    S      +     
Sbjct: 298 ERLQSFVSSDFAQV-------DYTDAVDILQKCGKAFEFPVSWGIDLSSEHERYLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 403

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                ++       D  +   L        +G  +GF+RLV  VTG +NI +VI  P 
Sbjct: 404 DMRLAEMDL--NKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPR 459


>gi|297621783|ref|YP_003709920.1| asparaginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297377084|gb|ADI38914.1| asparaginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 467

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 103/357 (28%), Gaps = 45/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  +  ++F E  FI + +  +  S       +  F    +
Sbjct: 126 AHLRPRTNTLGAVARVRSALAYATHKFFQEKGFIYVQTPVITASDCEGAGEL--FRVSTL 183

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                            D   +P +L  S + + +    +  + I+ F   +R       
Sbjct: 184 DPEKAPRNEQGGIDYSKDFFERPAFLTVSGQLNGEIFALSHSD-IYTFGPTFRAENSNTS 242

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M +    ++   +            +   F +     + 
Sbjct: 243 RHLAEFWMVEPEMAFCDLDMDMDNAEAYVKFLLQYL----MDNCQEDLEFFDKFISKGLI 298

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +               + ++          +++G R  +   W           +     
Sbjct: 299 DRLK-------LIIETSFERASYTYAMRILEKSGERFDYPVRWGLDLQSEHERYLSEKY- 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
            N    +  YP            D +     +L    I E+             + R ++
Sbjct: 351 FNKPVFITDYPKEIKPFYMRLNDDEKTVANMDLLFPKIGEIIGGSQREERHGYLKERMKE 410

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               K  + +  + ++             +G  +GF+R+V   TG  NI +VI  P 
Sbjct: 411 ---AKMNLDDYWWYMELR----EYGTAPHAGYGLGFERMVQFATGVENIRDVIAFPR 460


>gi|227111938|ref|ZP_03825594.1| asparaginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 466

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 108/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A    ++ F   +R        H
Sbjct: 185 ENLPRTEQGKVDFSEDFFGKEAFLTVSGQLNGETYACA-LSNVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  S + +     N+++   +       + +  +   F+E         
Sbjct: 244 LAEFWMIEPEVAFASLDDVAALAENLLKYVFQAV----LNERADDMAFFAERVDKEAITR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ + D           D           G +  +   W    S      +       
Sbjct: 300 LEKFVSSDFAQV-------DYTDAVEILLNCGQQFENPVYWGVDLSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R   ++ 
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERL-AQLD 404

Query: 294 EKKKIYNETYPI---DEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +     E   +   D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 405 SR----LEEMGLNKEDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|303323143|ref|XP_003071563.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240111265|gb|EER29418.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 937

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/343 (15%), Positives = 114/343 (33%), Gaps = 30/343 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     +++I S  R       FIEI +  LQ +   E+    FS       +  +P +
Sbjct: 267 SQSIFRIQSVISSYFRSTLDSMGFIEIHTPKLQGAA-TESGASVFSVR-----YFNRPAF 320

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 321 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHESLEV 380

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +              +          E +   +        +    L+         
Sbjct: 381 IDQVIKKIFEVIYGKHRREVQIVKHQFPSEDLVWLDKTPIITFSEGIRMLNESGWRTED- 439

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
               +    I    +    ++                   I+D++PA          P D
Sbjct: 440 GKELSDLEDISTRDEIRLGELV---------KEKYHTDYYIMDKFPASARPFYAMPDPND 490

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            RFT  ++++    E+ +    + +PI    R       ++   +      E+++     
Sbjct: 491 NRFTNAYDIFVRGQEIVSGGQRIHNPIMLEER------MRQMGVDPASM--EEYMEGFQW 542

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT---PFSQSNQEE 354
            +P  +G  +G +R++ML+    NI         P S   Q++
Sbjct: 543 GVPPHAGAGIGLERMLMLILKLGNIRLASMFHRDPKSFPAQDQ 585


>gi|228476075|ref|ZP_04060783.1| asparagine--tRNA ligase [Staphylococcus hominis SK119]
 gi|314936411|ref|ZP_07843758.1| asparagine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|228269898|gb|EEK11378.1| asparagine--tRNA ligase [Staphylococcus hominis SK119]
 gi|313655030|gb|EFS18775.1| asparagine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 430

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 108/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F EN F +ID   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   ++F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDQDAFLSQSGQLYMEAAAMAH-GRVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++E+ ++     +    +   +                      +   +  + D
Sbjct: 224 PEMAFTNHEESLQVQEQYVSHIVKSVLEHC--------------------KLELKALDRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 264 TSKLEKVSVPFPRISYDDAIKFLKEEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P +       +L A     E+    + + D      R ++      ++
Sbjct: 322 PTKIKPFYMQPNPDNEDTVLCADLIAPEGYGEIIGGSERINDLELLEQRIDE-----HQL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E+Y    D           SG  +G +R V  ++G  ++ E    P  
Sbjct: 377 DTESYNYYLDLRR--YGSVPHSGFGLGLERTVAWISGVEHVRETSPFPRL 424


>gi|325107799|ref|YP_004268867.1| asparaginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324968067|gb|ADY58845.1| Asparaginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 461

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 103/355 (29%), Gaps = 40/355 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE----------- 56
            H R R          RN   +++  +F +  F+ + +  +  S                
Sbjct: 121 AHLRPRTNTFGAIARVRNAASAAVHNFFQDRGFLYVHTPIITTSDCEGAGQMFHVTTLDL 180

Query: 57  THIRAFSTEL-IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
             + +  TE+   QD   KP  L  S +   +    +     + F   +R        H 
Sbjct: 181 ARLASLQTEIDYAQDFFAKPASLTVSGQLEAEIFATS-LGPCYTFGPTFRAENSNTTRHL 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E        +  M+     I+           +    + + F++    TV E  
Sbjct: 240 AEFWMIEPEMPFFDLQANMQLAEEFIKSVINHV----LTSCGDDIDFFNKRIDKTVLETL 295

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               +                      +++G        W           +        
Sbjct: 296 EHIRDESFAQVPYTE-------AIEILEKSGKTFEFPVAWGSDLQSEHERYLTEEHFKKP 348

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             +L  YP            D +  +  ++    I       E++   ++  R +     
Sbjct: 349 -IVLFDYPRTIKPFYMRCNDDGKTVRAMDVLVPRI------GEIIGGSQREERLDVLEAR 401

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++           +L        + +G  +GF+RL+ L+TG  NI + I  P +
Sbjct: 402 MQECDLNPEDY-WWYLDLRRFGTVEHAGFGLGFERLIQLLTGMQNIRDCIPFPRT 455


>gi|229144809|ref|ZP_04273206.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228638531|gb|EEK94964.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
          Length = 432

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 112/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++   ++ P  
Sbjct: 238 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPVIIEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 336 QNKENPAITDSFDLLYKGLEITSGAQRIHNYELLLASFKE-----KGLHPEKFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|288905680|ref|YP_003430902.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288732406|emb|CBI13978.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 448

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   +  RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDHRHLWLRSR--KQMAIMQVRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +      +      +     +AE F R +  D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALEI-LERDVDLLKKYIAEPFKRVSYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            + L   +  +                      D F       I    G+   T +  YP
Sbjct: 295 ISLLQEHENDEDA------------DYEHLEHGDDFGSPHETWISNYFGV--PTFVINYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +   +  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSVREDDYDALVAKMDALEMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          +G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEY-EFYLDLRKYGSVPHAGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|306833900|ref|ZP_07467024.1| asparagine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423901|gb|EFM27043.1| asparagine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 448

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   +  RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDHRHLWLRSR--KQMAIMQVRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +      +      +     +AE F R +  D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALEI-LERDVDLLKKYIAEPFKRVSYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            + L   +  +                      D F       I    G+   T +  YP
Sbjct: 295 ISLLQEHENDEDAD------------YEHLEHGDDFGSPHETWISNYFGV--PTFVINYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +   +  +
Sbjct: 341 ASFKAFYMKPVPDNPERVLCADL-----LAPEGYGEIIGGSVREDDYDALVAKMDALEMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          +G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEY-EFYLDLRKYGSVPHAGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|282881979|ref|ZP_06290620.1| asparagine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281298009|gb|EFA90464.1| asparagine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 461

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 105/355 (29%), Gaps = 41/355 (11%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI- 67
           H R R          R++I  ++ ++F E  F+   +  +  S       +   +T  + 
Sbjct: 121 HLRPRTNTFNAVFRVRSLIAYAIHKFFQERGFVYFHAPIITASDAEGAGEMFQVTTLPLE 180

Query: 68  ------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                        +D   K   L  S +   +    A    ++ F   +R        H 
Sbjct: 181 DIPKNDEGKVDYKKDFFGKETNLTVSGQLEDEAFALA-FGNVYTFGPTFRAENSNTPRHA 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       M     +++                    F++     +    
Sbjct: 240 AEFWMIEPEMAFADLNVNMDVAEAMLKYIIRYV----LENAKEEMKFFNKFIDKDLL--- 292

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
              A +D   + +  ++          ++A         W           I   +    
Sbjct: 293 ---ARLDNVVSNEF-ERITYTQAIEILEKANKDFKFPVKWGIDLQTEHERYITEEVFKKP 348

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  YP    A       D +     +L    +       E++   ++ HR +   ++
Sbjct: 349 V-FVTNYPKEIKAFYMTENDDKKTVAAMDLLVPGV------GEIIGGSQREHRIDILEKK 401

Query: 295 KKKIYNETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K +       D    L         SG  +GF+R VM +TG  NI +VI  P +
Sbjct: 402 MKDLNMNMDEYDWYLDLRRF-GTCIHSGYGLGFERAVMYITGMKNIRDVIPFPRT 455


>gi|116627679|ref|YP_820298.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122267724|sp|Q03L20|SYN_STRTD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116100956|gb|ABJ66102.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312278206|gb|ADQ62863.1| Asparaginyl-tRNA synthetase (AsnS) [Streptococcus thermophilus
           ND03]
          Length = 448

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/348 (15%), Positives = 112/348 (32%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++      RN I  +  ++F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAIQQIRNAIIYATYDFFDKNGFIKFDSPILSSNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+++ +      ++       Q                  +        +  +  
Sbjct: 236 EYSFLSHDESLDLQEAYVK----ALIQGAIDRAPQALEILERDVDLLKKYIAEPFKRVSY 291

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              +D     ++                     D F       I    G+   T +  YP
Sbjct: 292 DEAIDLLQAHEKDEDTDY---------EHLEHGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + + +++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDDYDALVAKMEELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 RSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|225429870|ref|XP_002283440.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 544

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 103/339 (30%), Gaps = 45/339 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  +++  R++ +   F+ I +  L    S G     R         D+  +P 
Sbjct: 236 QAIFRVQCQVENIFRQFLLSEGFVGIHTPKLIGGSSEGGSAVFR--------LDYKGQPA 287

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  +     ++F     +R  +     H  EFT L+     + +   + D
Sbjct: 288 CLAQSPQLHKQMAICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKEHYFEVMD 347

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +  A   +  +    +          E +       R                   
Sbjct: 348 IVDRLFVAMFDSLNENCKKELEAIERQYPFEPLKYLRKTLRLP---------------FQ 392

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
                 ++ G+ V      +    R L + +    G     IL RYP             
Sbjct: 393 EGVQMLKEVGMEVDPYGDLNTEAERKLGQLVLEKYGTE-FYILHRYPLAVRPFYTMPSYD 451

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFL 310
           DP ++  F+++    E+ +    +  P     R             E   ID      ++
Sbjct: 452 DPLYSNSFDVFIRGEEIISGAQRVHVPDFLEKR------------AEACGIDVKTISTYI 499

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+VML    NNI +    P  
Sbjct: 500 DSFRYGAPPHGGFGVGLERVVMLFCALNNIRKTSLFPRD 538


>gi|116749903|ref|YP_846590.1| asparaginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|226695302|sp|A0LL53|SYN_SYNFM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116698967|gb|ABK18155.1| asparaginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 466

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 103/357 (28%), Gaps = 46/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST---- 64
           H R R          RN +  ++ ++F +  F  I +  +  S       +   +T    
Sbjct: 127 HLRPRTNTIGAVSRVRNRLSYAIHQFFQDRGFYYIHTPIITASDCEGAGEMFRVTTLDAQ 186

Query: 65  --------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQP 115
                   E+   D   KP +L  S +   +    A   +++ F   +R        H  
Sbjct: 187 NAPAKVPEEVYRADFFGKPAFLTVSGQLQAEIYALA-LGRVYTFGPTFRAENSNTSRHLA 245

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A    E  ++    +IR    VA Q      +            T+     
Sbjct: 246 EFWMVEPEMAFCDLEGDLEIAQALIRHLIGVALQDCAEDLDFFTRFIEPTLRGTLE---- 301

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
                         +           +++G        W +         +   +     
Sbjct: 302 -------TVAFSPFETVTYTEAVRILKESGENFEFPVEWGNDLQAEHERYLTEKVFRKPA 354

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR---FEKEM 292
             +  +P            D       ++            E++   ++  R     ++M
Sbjct: 355 -AVIHFPRALKPFYMRVNDDGNTVAAMDILVPG------TGEIIGGSQREERPDILVEQM 407

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K           + +L          +G  MG +RLV  VTG  NI EVI  P +
Sbjct: 408 RLKSV----APEDYKWYLDLREFGSVPHAGFGMGLERLVQFVTGLPNIREVIPFPRT 460


>gi|242373763|ref|ZP_04819337.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348500|gb|EES40102.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 430

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F E  F +ID   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEIIRATYEFFNEKGFTKIDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   ++F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDQDAFLSQSGQLYMEAAAMAH-GRVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                          +  + D
Sbjct: 224 PEMAFTNHAESLEIQEQYVTHVVQSVLKNCV--------------------LELKALDRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 264 TTKLEKVATPFPRISYDDAIEFLKQEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P +       +L A     E+    + + D      R ++      ++
Sbjct: 322 PTRIKPFYMQPNPDNEDTVLCADLIAPEGYGEIIGGSERINDLDLLEERIKE-----HEL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E+Y    D           SG  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEESYSYYLDLRR--YGSVPHSGFGLGLERTVAWISGVEHVRETSPFPRL 424


>gi|30020303|ref|NP_831934.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229043956|ref|ZP_04191649.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229127613|ref|ZP_04256602.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|296502783|ref|YP_003664483.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|29895854|gb|AAP09135.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228655690|gb|EEL11539.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228725367|gb|EEL76631.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH676]
 gi|296323835|gb|ADH06763.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 432

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 336 QNKENPAITDSFDLLYKGLEITSGAQRIHNYELLLASFKE-----KGLHPEKFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|258405839|ref|YP_003198581.1| asparaginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257798066|gb|ACV69003.1| asparaginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 463

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 99/355 (27%), Gaps = 42/355 (11%)

Query: 16  YRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQ 69
            R R          R  +  ++  +F E  F  + +  +  S       +  F    +  
Sbjct: 123 LRPRTNKYGALYRIRAELAQAIHRFFHERGFYYVHTPIITGSDCEGAGEM--FQVTSLDM 180

Query: 70  DHIR---------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
           +            +  +     L  S + S  ++LA     ++ F   +R        H 
Sbjct: 181 NTPPRANGQVDHSQDFFGQSAMLTVSGQLSA-EVLACSLGNVYTFGPTFRAENSNTPRHA 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    +  +      ++       +      ++              E  
Sbjct: 240 AEFWMVEPEMAFADLKDDIDLAEAFLQYLVTHIREHCSEDLDL-------FTRFVDKELS 292

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
           A   NI     +  P +    +L     +         T+ +         +        
Sbjct: 293 ATLDNIAENAFVRLPYREAVEILQKARPKQAFEYEP--TFGEDLQTEHERYLTETH-FQK 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             ++  YP            D       ++    +       E++   ++  R E     
Sbjct: 350 PVVVYDYPKSIKPFYMRVNDDQETVAAMDVLVPRV------GEIIGGSQREERLEVLEGR 403

Query: 295 KKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +        E +L          +G  MGF+R++M +TG  NI + +  P +
Sbjct: 404 IADMGLPREEY-EWYLDLRRYGTVPHAGFGMGFERVLMFLTGVGNIRDAVPFPRT 457


>gi|228972207|ref|ZP_04132822.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978822|ref|ZP_04139191.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228780898|gb|EEM29107.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228787520|gb|EEM35484.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
          Length = 428

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 120 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 173

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 174 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 233

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 234 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPVITEIPKI 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 274 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 332 QNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASFKE-----KGLHPEKFQ---SYL 383

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 384 NTFRYGCPPHGGFGIGLERIVYKILELTNVREASAFPRD 422


>gi|330996051|ref|ZP_08319945.1| asparagine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329574048|gb|EGG55626.1| asparagine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 467

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 105/357 (29%), Gaps = 38/357 (10%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE- 65
             H R R          R+ +  ++  YF E+ F    +  +  S       +   +T+ 
Sbjct: 122 HAHMRLRTNTFGAVFRIRHNMAMAVHRYFHEHGFFYFHTPIITASDCEGAGQMFQVTTKN 181

Query: 66  ------------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                           D   K   L  S +   +    A    I+ F   +R        
Sbjct: 182 LYDLKKDDEGKIDYSDDFFGKTTSLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPR 240

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M    + I+     A          +    ++    T+ E
Sbjct: 241 HLAEFWMIEPEVAFNDIHDNMDLAEDFIKYCVRWA----LEHCQDDLAFLNKMIDKTLLE 296

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                   D                  +A + G +      W    +      +      
Sbjct: 297 RLNFVVENDFVRLPYTKGIEILE----EAVKNGRKFEFPIYWGADLASEHERYLVEEY-F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               IL  YP    A       D +  +  ++    I       E++   E+   ++K M
Sbjct: 352 KRPVILTDYPKEIKAFYMKMNDDGKTVRAMDVLFPQI------GEIIGGSEREENYDKLM 405

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +++      +   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 406 ARIEELNIPMKDM-WWYLDTRRFGTCPHSGFGLGFERLILFVTGMQNIRDVIPFPRT 461


>gi|160890593|ref|ZP_02071596.1| hypothetical protein BACUNI_03038 [Bacteroides uniformis ATCC 8492]
 gi|270295728|ref|ZP_06201928.1| asparaginyl-tRNA synthetase [Bacteroides sp. D20]
 gi|317479867|ref|ZP_07938985.1| asparaginyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|156859592|gb|EDO53023.1| hypothetical protein BACUNI_03038 [Bacteroides uniformis ATCC 8492]
 gi|270273132|gb|EFA18994.1| asparaginyl-tRNA synthetase [Bacteroides sp. D20]
 gi|316903976|gb|EFV25812.1| asparaginyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 467

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 110/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F +  F    +  +  S       +   +T+  
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHDRGFFYFHTPIITASDCEGAGQMFQVTTKNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M    + I+   + A            + F +         
Sbjct: 242 LAEFWMIEPEVAFNDITDNMDLAEDFIKYCVQWALDNCADDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +   + +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLQGVLKESFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERYLVEDH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSERESDYNKLMTRIDEL 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMTNIRDVIPFPRT 461


>gi|310791929|gb|EFQ27456.1| aspartyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 889

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/334 (18%), Positives = 112/334 (33%), Gaps = 35/334 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H   +     R MI    RE    + FIEI +  LQ +   E+    F       ++  
Sbjct: 252 RHPSNQALFRVRAMITRQFRETLDNSGFIEIQTPKLQPAA-TESGAEVFK-----LNYFG 305

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           +  +L  SP+ + +  ++A   K++     +R        H  E+T L+         ++
Sbjct: 306 RRAFLAQSPQLAKQMTISADFGKVYEIGPVFRAENSNTHRHLTEYTGLDIE------MKI 359

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            K    II+   +              N F+    +   +        D    LD     
Sbjct: 360 QKHYHEIIKVLDQTL-----------KNIFAAVHSMPELKIIRERFPSDDLVWLDETPII 408

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                    +  G  V  +D  +    R+    ++   G +   ILD++PA         
Sbjct: 409 SFRDGLQMLRDDGRDVEDEDLSTPDEIRLGE-LVKEKYGTD-YYILDKFPANARPFYTHK 466

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             DP +T  F+++    E+C     + DP E R    +     K I  +      ++L  
Sbjct: 467 ADDPFWTNSFDIFVRGQEICTGGQRINDPKELRKNMAE-----KGISEDDM---AEYLEA 518

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                P   G  +G DR+V L+    ++      
Sbjct: 519 FDLGAPPHGGAGLGLDRVVFLLLNLGDVRYGTLF 552


>gi|308179952|ref|YP_003924080.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|308045443|gb|ADN97986.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 431

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/349 (16%), Positives = 108/349 (30%), Gaps = 42/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R    +  RN +  ++ E+F +  FI+ID+  L   +P         
Sbjct: 115 LDHRHLWLRSS--RPNAIMRIRNEVIRAVYEFFNDRGFIKIDAPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +  YL  S +    +  A    KIF F   +R  +     H  EF  LE
Sbjct: 166 TTELFKTDYFGQDAYLSQSGQLY-GEAGAMAFGKIFTFGPTFRAEKSKTRRHLTEFWQLE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ ++    ++    +                      I          + D
Sbjct: 225 PEMAWMHQDESLEVQEQLVAYLVQAV--------------------IDHCPHELAVLDRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + T       P   +LY  A         D  W   F       +  +   +    +  Y
Sbjct: 265 VATLQKYTKLPFPRVLYDDAITLLQANGFDVDWGVDFGSPEETFLAEH--FDQPVFVLNY 322

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L            E++   E+   ++   +       
Sbjct: 323 PKAIKAFYMQAHPTRDDVVIAADL-----LAPEGYGEIIGGSERSTDYDYLKERLLASGQ 377

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     E +L          SG  MG +R +  +T  +++ E I  P  
Sbjct: 378 DLQDY-EWYLDLRKYGSVPHSGFGMGLERFLTWITLQDHVRETIPFPRM 425


>gi|281178061|dbj|BAI54391.1| asparaginyl-tRNA synthetase [Escherichia coli SE15]
          Length = 466

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LERFIEADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R  +  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|218548446|ref|YP_002382237.1| asparaginyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218355987|emb|CAQ88603.1| asparaginyl tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|323976683|gb|EGB71771.1| asparaginyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324113739|gb|EGC07714.1| asparaginyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 466

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LERFIEADFAQV-------DYTDAVTILENCGKKFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R  +  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|320202327|gb|EFW76898.1| Asparaginyl-tRNA synthetase [Escherichia coli EC4100B]
          Length = 466

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LERFIEADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R  +  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|309787803|ref|ZP_07682413.1| asparaginyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308924202|gb|EFP69699.1| asparaginyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 463

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 109/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 122 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 182 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 241 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 297 LERFIEADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  ++
Sbjct: 350 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDV 402

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 403 RMLEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 457


>gi|317047577|ref|YP_004115225.1| asparaginyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316949194|gb|ADU68669.1| asparaginyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 466

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 111/358 (31%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  L       R+ +  +L  +F EN +  + +  +  S       +   ST  +
Sbjct: 125 AHLRPRTNLIGAVARTRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRDPQGKVDYDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  + +        +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFATLDDAAALAEAMLKYVFKAVLEE----RADDLAFFAERVDKDAISR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ N D           D         ++G    +  +W    S      +       
Sbjct: 300 LERFVNADFAQV-------DYTDAIEILLKSGQNFENPVSWGVDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|167390996|ref|XP_001739593.1| aspartyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165896669|gb|EDR24016.1| aspartyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 544

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 104/350 (29%), Gaps = 46/350 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRA 61
           D     R               ++      RE+    +F+EI +  L   S    ++I  
Sbjct: 221 DTRLDNRMLDLRTVTNIAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSSEGGSNI-- 278

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
           F  +     +  +  YL  SP+   +  +     K+F     +R        H  EF  L
Sbjct: 279 FEVK-----YFDRKAYLAQSPQLYKQMAIMGDFRKVFEVGPVFRAENSNTRRHLTEFEGL 333

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +             D M  +         K F  +          E +            
Sbjct: 334 DIEMEIVENYHECIDVMEKLFTFIFDEIPKRFPDELKVIRKQYPFEDLVYRPF------- 386

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                     +          + AG  +   D +S      L E I+     +   ILD+
Sbjct: 387 ---------LRLTYKEAIEMLRAAGETIGDYDDFSTPQEVKLGELIKAKYNTD-FYILDK 436

Query: 241 YPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           +PA            DP ++  ++++    E+ +    + DP     R  +      K  
Sbjct: 437 FPAAIRPFYTMPDIDDPNYSNSYDVFVRGQEITSGAQRIHDPEFLMKRCIE------KGV 490

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +      +D++          +G  +G +R+ ML  G  NI +V   P  
Sbjct: 491 DPATL--KDYIESFRFGSWPHAGCGIGLERITMLYLGIPNIRKVTLFPRD 538


>gi|331646196|ref|ZP_08347299.1| asparagine--tRNA ligase [Escherichia coli M605]
 gi|331044948|gb|EGI17075.1| asparagine--tRNA ligase [Escherichia coli M605]
          Length = 481

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 109/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 140 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 199

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 200 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 258

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 259 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 314

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 315 LERFIEADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 367

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  ++
Sbjct: 368 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDV 420

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 421 RMLEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 475


>gi|213420287|ref|ZP_03353353.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 193

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 10/192 (5%)

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFS 219
               E ++  +AF R+  ID       P   D+  L   A +  +    D  +    +  
Sbjct: 9   CQPAESLSYQQAFLRHLEID-------PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQ 61

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
            +    +EP++G    T +  +PA +++LA I   D R  +RFE+Y   IEL N   EL 
Sbjct: 62  LLFTMGVEPHIGKEKPTFIYHFPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELT 121

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           D  EQ+ RFE++ +++        PID++ L  L   +P  SG+A+G DRLVML  GA +
Sbjct: 122 DAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAES 181

Query: 339 INEVIWTPFSQS 350
           + +VI     ++
Sbjct: 182 LADVIAFTVDRA 193


>gi|126662967|ref|ZP_01733965.1| asparagine--tRNA ligase [Flavobacteria bacterium BAL38]
 gi|126624625|gb|EAZ95315.1| asparagine--tRNA ligase [Flavobacteria bacterium BAL38]
          Length = 481

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/380 (17%), Positives = 125/380 (32%), Gaps = 42/380 (11%)

Query: 3   QIPSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
             P +    +   + H R R       +  R+++  ++ +YF E  F+ +++  +  S  
Sbjct: 104 MQPKKHSLEFLRENAHLRVRTNTFGAIMRVRSVLSFAVHQYFQEKGFVYVNTPIITGSDA 163

Query: 54  GNE-----THIRAF----STEL----IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                        F     TE       +D   K   L  S +   +    A   +++ F
Sbjct: 164 EGAGEMFKVTALPFDGTPRTEEGKVNFKEDFFGKETNLTVSGQLEAETYAMA-LGQVYTF 222

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A       M    + I+   + A +K         
Sbjct: 223 GPTFRAENSNTSRHLAEFWMIEPEVAFNDLADNMDLAEDFIKYVIKYAVEKCGDDLKFLE 282

Query: 160 NPFSEPEYITVAEAFARYANID--------LGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
               + E        +    +D            +   +  D        ++   +   +
Sbjct: 283 GRLIDEEKSKPQADRSEMNLLDKLNFVLENNFKRVSYTEAIDILKDSTPNKKKKFQYIIN 342

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI--YPADPRFTKRFELYACNI 269
           +  +D+ S      +E +    C  IL  YPA   A         +P      E      
Sbjct: 343 EWGADLQSEHERFLVEKH--FKCPVILFDYPAKIKAFYMRLNDNTEPGK----ETVRAMD 396

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDR 328
            L     E++   ++  R++  +++ K +  +   +   +L          SG  +GF+R
Sbjct: 397 ILFPGIGEIVGGSQREERYDVLVEKMKALGIDEEEL-WWYLDTRRFGSAVHSGFGLGFER 455

Query: 329 LVMLVTGANNINEVIWTPFS 348
           LV+ VTG  NI +VI  P +
Sbjct: 456 LVLFVTGMTNIRDVIPFPRT 475


>gi|83033003|ref|XP_729287.1| aspartyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23486621|gb|EAA20852.1| aspartyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
          Length = 681

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/336 (13%), Positives = 111/336 (33%), Gaps = 36/336 (10%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
               ++ I    R Y ++N F EI +   L  S     +           ++  +  +L 
Sbjct: 368 IFYLQSEICKIFRNYLIDNNFTEIHTPKLLGESSEGGANA-------FQINYFNQNGFLA 420

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQLMKDCM 137
            SP+   +  + +G +++F  A  +R        H  E+  L+    +   Y + +    
Sbjct: 421 QSPQLYKQMCINSGFDRVFEIAPVFRAENSNTYRHLCEYVSLDVEMTYKYDYMENVYFYD 480

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           ++ +                     +E   + +     +Y + D       P       +
Sbjct: 481 SMFKNIFNKL-------------INNEKNKLFIKNIKNQYPSEDFKWLAVTPIFTYEQAI 527

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIE---KIEPNLGINCCTILDRYPAPESALA-NIYP 253
            L  +   + +  ++  +   +  + +   KI          I+  +P+           
Sbjct: 528 KLLIEHKKLNLQSEEILTYDMTTDMEKELGKIIKQTHDTDYYIIINFPSGLRPFYTMYNE 587

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
            DP+ +  ++ +    E+ +    + D      +   +  +K  +  +   +D  ++   
Sbjct: 588 KDPKISNSYDFFMRGEEILSGSQRISDV-----KLLLDNIKKFNLDPK--KLD-FYIDSF 639

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  SG  +G +R++ML  G NNI +    P  
Sbjct: 640 AYSSYPHSGCGIGLERVLMLFLGLNNIRKTSLFPRD 675


>gi|329962609|ref|ZP_08300557.1| asparagine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328529640|gb|EGF56538.1| asparagine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 467

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 110/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F +  F    +  +  S       +   +T+  
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHDRGFFYFHTPIITGSDCEGAGQMFQVTTKNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M    + I+   + A            + F +         
Sbjct: 242 LAEFWMVEPEVAFNDITDNMDLAEDFIKYCVQWALDNCADDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +   + +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLQGVLKESFVRLPYTEGIRIL-EEAVAKGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYGKLMTRIEEL 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMTNIRDVIPFPRT 461


>gi|325851852|ref|ZP_08171017.1| asparagine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325484694|gb|EGC87607.1| asparagine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 463

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 101/351 (28%), Gaps = 35/351 (9%)

Query: 13  DFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETH---------- 58
               R   F      R+ +  ++  YF E+ F    +  +  S      +          
Sbjct: 121 HMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGNMFQVTTLDLD 180

Query: 59  --IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
              ++   +    D   K   L  S +   +    +    I+ F   +R        H  
Sbjct: 181 RIAKSGKVDYNA-DFFGKRTNLTVSGQLEGELGATS-LGAIYTFGPTFRAENSNTPRHLA 238

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A    ++LM    + I+     A                +       E  A
Sbjct: 239 EFWMVEPEVAFIDKDELMDLEEDFIKYCVRWALDNCKDDLEFLNKMIDK-------ELIA 291

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQ-AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
           R   +     +         +L    A              D+ S      +E +     
Sbjct: 292 RLEGVLKEDFVRLTYTEGIEILRKAVADGVKFEFPITGWGMDLSSEHERYLVEEH--FRR 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YP+   +       D +  +  ++    I       E++    +   ++K + E
Sbjct: 350 PVIMTDYPSEIKSFYMKKNPDGKTMQGTDVLFPRI------GEIIGGSVREENYDKLLAE 403

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 +    D              G  +GF+RL++ VTG  NI +VI  
Sbjct: 404 IDSRGMKREVYDWYLDTRKYGTCPHGGFGLGFERLILFVTGMQNIRDVIPF 454


>gi|319900038|ref|YP_004159766.1| asparaginyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415069|gb|ADV42180.1| asparaginyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 467

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 106/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++  +F E  F    +  +  S       +   +T+  
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAMAIHHFFHERGFFYFHTPIITASDCEGAGQMFQVTTKNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A            + F +         
Sbjct: 242 LAEFWMIEPEVAFNDIVDNMDLAEEFIKYCVQWALDNCADDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +     +  P      +L   A   G +      W  D+ S      +E +   
Sbjct: 295 IERLQGVLKEKFVRLPYTEGIRIL-EDAVSKGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLVTRIEEL 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMTNIRDVIPFPRT 461


>gi|325268749|ref|ZP_08135377.1| asparagine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324988917|gb|EGC20872.1| asparagine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 476

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 101/351 (28%), Gaps = 35/351 (9%)

Query: 13  DFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETH---------- 58
               R   F      R+ +  ++  YF E+ F    +  +  S      +          
Sbjct: 134 HMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGNMFQVTTLDLD 193

Query: 59  --IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
              ++   +    D   K   L  S +   +    +    I+ F   +R        H  
Sbjct: 194 RIAKSGKVDYNA-DFFGKRTNLTVSGQLEGELGATS-LGAIYTFGPTFRAENSNTPRHLA 251

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A    ++LM    + I+     A                +       E  A
Sbjct: 252 EFWMVEPEVAFIDKDELMDLEEDFIKYCVRWALDNCKDDLEFLNKMIDK-------ELIA 304

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQ-AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
           R   +     +         +L    A              D+ S      +E +     
Sbjct: 305 RLEGVLKEDFVRLTYTEGIEILRKAVADGVKFEFPITGWGMDLSSEHERYLVEEH--FRR 362

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YP+   +       D +  +  ++    I       E++    +   ++K + E
Sbjct: 363 PVIMTDYPSEIKSFYMKKNPDGKTMQGTDVLFPRI------GEIIGGSVREENYDKLLAE 416

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 +    D              G  +GF+RL++ VTG  NI +VI  
Sbjct: 417 IDSRGMKREVYDWYLDTRKYGTCPHGGFGLGFERLILFVTGMQNIRDVIPF 467


>gi|332878089|ref|ZP_08445819.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332684051|gb|EGJ56918.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 470

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 105/357 (29%), Gaps = 38/357 (10%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE- 65
             H R R          R+ +  ++  YF E+ F    +  +  S       +   +T+ 
Sbjct: 125 HAHMRLRTNTFGAVFRIRHHMAMAIHRYFHEHGFFYFHTPIITGSDCEGAGQMFQVTTKN 184

Query: 66  ------------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                           D   K   L  S +   +    A    I+ F   +R        
Sbjct: 185 LYDLKKDDEGKIDYSDDFFGKTTSLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPR 243

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M    + I+     A          +    ++    T+ E
Sbjct: 244 HLAEFWMIEPEVAFNDIRDNMDLAEDFIKYCVRWA----LDNCQDDLAFLNKMIDKTLLE 299

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                   D                  +A + G +      W    +      +      
Sbjct: 300 RLNFVVENDFVRLPYTKGIEILE----EAVKNGRKFEFPIYWGADLASEHERYLVEEY-F 354

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               IL  YP    A       D +  +  ++    I       E++   E+   ++K M
Sbjct: 355 KRPVILTDYPKEIKAFYMKMNDDGKTVRAMDVLFPQI------GEIIGGSEREENYDKLM 408

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +++      +   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 409 ARIEELNIPMKDM-WWYLDTRRFGTCPHSGFGLGFERLILFVTGMQNIRDVIPFPRT 464


>gi|254555960|ref|YP_003062377.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300767762|ref|ZP_07077672.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|254044887|gb|ACT61680.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300494747|gb|EFK29905.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 431

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 107/349 (30%), Gaps = 42/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R    +  RN +  ++ E+F +  FI+ID+  L   +P         
Sbjct: 115 LDHRHLWLRSS--RPNAIMRIRNEVIRAVYEFFNDRGFIKIDAPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +  YL  S +    +  A    KIF F   +R  +     H  EF  LE
Sbjct: 166 TTELFKTDYFGQDAYLSQSGQLY-GEAGAMAFGKIFTFGPTFRAEKSKTRRHLTEFWQLE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ ++    ++    +                      I          + D
Sbjct: 225 PEMAWIHQDESLEVQEQLVAYLVQAV--------------------IDHCPHELAVLDRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + T       P   + Y  A         D  W   F       +  +   +    +  Y
Sbjct: 265 VATLQKYTKLPFPRVSYDDAITLLQANGFDVDWGVDFGSPEETFLAEH--FDQPVFVLNY 322

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L            E++   E+   ++   +       
Sbjct: 323 PKAIKAFYMQAHPTRDDVVIAADL-----LAPEGYGEIIGGSERSTDYDYLKERLLASGQ 377

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     E +L          SG  MG +R +  +T  +++ E I  P  
Sbjct: 378 DLQDY-EWYLDLRKYGSVPHSGFGMGLERFLAWITLQDHVRETIPFPRM 425


>gi|146318268|ref|YP_001197980.1| asparaginyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|166232742|sp|A4VTZ1|SYN_STRSY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|145689074|gb|ABP89580.1| Aspartyl/asparaginyl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 508

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/347 (18%), Positives = 119/347 (34%), Gaps = 33/347 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++      RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  +  YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGQLAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +               +   +AE F R A  D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRY-IAEPFKRVAYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            T L    + D+   Y                 D F       I    G+   T +  YP
Sbjct: 295 ITLLQ-EHEADKDTDYE-----------HIEHGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDNYDALVAKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                E +L           G  +G +R+V  V G  +I E I  P 
Sbjct: 396 KSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPT 441


>gi|226505916|ref|NP_001145746.1| hypothetical protein LOC100279253 [Zea mays]
 gi|219884291|gb|ACL52520.1| unknown [Zea mays]
          Length = 545

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 48/339 (14%), Positives = 103/339 (30%), Gaps = 45/339 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY--SPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  +++  RE+ +   F+ I +  L    S G           +    +  +P 
Sbjct: 237 QAIFRIQCQVENKFREFLLSKDFVGIHTPKLISGSSEGGAA--------VFKLLYNGQPA 288

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  L  G E++F     +R        H  EF  L+     + +   + D
Sbjct: 289 CLAQSPQLHKQMALCGGFERVFEVGPVFRAENSNTHRHLCEFVGLDAEMEIKEHYFEVCD 348

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +  +      +  + +    N     E +   +   +                   
Sbjct: 349 IIDGLFVSIFKHLTENCNKELETINRQYPFEPLKYLDKTLKLTY---------------E 393

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
                 ++AG  +      +    + L   +      +   I+ RYP             
Sbjct: 394 EGVQMLKEAGTEIEPMGDLNTEAEKKLGRLVREKYDTD-FFIMYRYPLAVRPFYTMPCYD 452

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFL 310
           +P ++  F+++    E+ +    +  P     R  +              ID      ++
Sbjct: 453 NPAYSNSFDVFIRGEEIISGAQRIHTPELLTKRATE------------CGIDVSTISTYI 500

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+VML    NNI +    P  
Sbjct: 501 EVFSYGAPPHGGFGVGLERVVMLFCALNNIRKTSMFPRD 539


>gi|332211189|ref|XP_003254702.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           isoform 1 [Nomascus leucogenys]
          Length = 477

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/347 (14%), Positives = 104/347 (29%), Gaps = 34/347 (9%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI---RAF-ST 64
           H+R R       L  R+   +++  +F ++ F+ I +  +  +       +         
Sbjct: 144 HFRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGELFQLEPSGKL 203

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           +L  ++    P +L  S +    ++++    ++F F   +R        H  EF M+E  
Sbjct: 204 KLSEENFFNVPAFLTVSGQLHL-EVMSGAFTQVFAFGPTFRAENSQSRRHLAEFYMIEAE 262

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +     Q +   +  +  A  +            C+ F  P      E   +       
Sbjct: 263 ISFVDSLQDLMQVIEKLFKATTMMVLSKCPEDVELCHKFIAPGQKDRLEHMLK------- 315

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
              +N             +QA         W         + +  + G      +  YP 
Sbjct: 316 ---NNFLIISYTEAVEILKQASQNFTFTPEWGADLQTEHEKYLVKHCGNIPV-FVINYPL 371

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR--FEKEMQEKKKIYNE 301
                      D        +      L     EL     +  R  F +E   +  +   
Sbjct: 372 ALKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGGLREERYHFLEERLARSGLTE- 426

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              + + +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 427 ---VYQWYLDLRRFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 470


>gi|55822784|ref|YP_141225.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|81820310|sp|Q5M067|SYN_STRT1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|55738769|gb|AAV62410.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 448

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 121/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++      RN I  +  ++F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAIQQIRNAIIYATYDFFDKNGFIKFDSPILSSNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQK--------IFSFQNVNCNPFSEPEYITVAEAF 174
             +  S+++ +      ++   + A  +              +        + ++  EA 
Sbjct: 236 EYSFLSHDESLDLQEAYVKALIQGAIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I    G+  
Sbjct: 295 -----IDLLQAHENDEDTDYEHLE---------------HGDDFGSPHETWISNYFGV-- 332

Query: 235 CTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA  ++      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +++  +     E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMEELGMDRSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|255690547|ref|ZP_05414222.1| asparagine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260624004|gb|EEX46875.1| asparagine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 467

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 105/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKNEEGSIIYDDDFFGKQASLTVSGQLEGELAATA-LGSIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+     A            + F +     + E 
Sbjct: 242 LAEFWMIEPEVAFNDITDNMDLAEEFIKYCVRWALDNCADDVKFLNDMFDK----GLIER 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
                  D           D   +   A   G +      W  D+ S      +E +   
Sbjct: 298 LQGVLKDDFVRLPY----TDGIKILEDAVAKGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSERESDYNKLMTRIEEL 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG +NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRT 461


>gi|228939329|ref|ZP_04101921.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228820353|gb|EEM66386.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326939905|gb|AEA15801.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 432

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 336 QNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASFKE-----KGLHPEKFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKILELTNVREASAFPRD 426


>gi|55820868|ref|YP_139310.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|81820473|sp|Q5M4S8|SYN_STRT2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|55736853|gb|AAV60495.1| asparaginyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 448

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 121/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++      RN I  +  ++F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAIQQIRNAIIYATYDFFDKNGFIKFDSPILSSNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQK--------IFSFQNVNCNPFSEPEYITVAEAF 174
             +  S+++ +      ++   + A  +              +        + ++  EA 
Sbjct: 236 EYSFLSHDESLDLQEAYVKALIQGAIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I    G+  
Sbjct: 295 -----IDLLQAHENDEDTDYEHLE---------------HGDDFGSPHETWISNYFGV-- 332

Query: 235 CTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA  ++      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDDYDALVA 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +++  +     E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMEELGMDRSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|283850394|ref|ZP_06367683.1| asparaginyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574420|gb|EFC22391.1| asparaginyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 466

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/362 (17%), Positives = 113/362 (31%), Gaps = 51/362 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
            H R R       L  R  +  ++  +F E  F  + +  +  S       +  F     
Sbjct: 123 AHLRPRTNKYGAMLRLRAALGQAVHAFFAERGFYWVHTPIITGSDCEGAGEM--FRVTAL 180

Query: 65  --------------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
                         E   +D   K  YL  S + + + L  A   +++ F   +R     
Sbjct: 181 SAAEAAAEAVLPPAERGSRDFFGKDAYLTVSGQLTAEPLACA-LGRVYAFGPTFRAEHSD 239

Query: 111 C-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   A    E  M+    +++    VA +       +            
Sbjct: 240 TSRHAAEFWMVEPEMAFADLEDNMELGEGLLKHMVRVAMEDCAEDFGLFAKYVDP----- 294

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +     A +     +  P      +L    +     VA      D+ S       E +
Sbjct: 295 --KLPETLATLLDAPFVRLPYAEAVKILLAAKKTFEYPVADGR---DLQSEHERYLTEEH 349

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                  ++  YP    A       D R     ++    I       E++    +  R +
Sbjct: 350 --FKRPVVVYDYPKDIKAFYMRQNDDGRTVAAMDVLVPGI------GEIIGGSAREERLD 401

Query: 290 KE-MQEKKKIY-NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +   + +++    E Y     +L           G  +GF+R++MLVTG  NI +V+  P
Sbjct: 402 RLSARIREQGLPLEAYG---WYLDTRRFGTVPHVGFGLGFERVLMLVTGIGNIRDVMAFP 458

Query: 347 FS 348
            +
Sbjct: 459 RT 460


>gi|300819171|ref|ZP_07099372.1| asparaginyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300528190|gb|EFK49252.1| asparaginyl-tRNA synthetase [Escherichia coli MS 107-1]
          Length = 466

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LERFIEADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R  +  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|16128897|ref|NP_415450.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|26246957|ref|NP_752997.1| asparaginyl-tRNA synthetase [Escherichia coli CFT073]
 gi|30062465|ref|NP_836636.1| asparaginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56479774|ref|NP_706849.2| asparaginyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|74311488|ref|YP_309907.1| asparaginyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|82544672|ref|YP_408619.1| asparaginyl-tRNA synthetase [Shigella boydii Sb227]
 gi|89107780|ref|AP_001560.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           W3110]
 gi|91210032|ref|YP_540018.1| asparaginyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110641127|ref|YP_668857.1| asparaginyl-tRNA synthetase [Escherichia coli 536]
 gi|110804939|ref|YP_688459.1| asparaginyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157157150|ref|YP_001462150.1| asparaginyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157160452|ref|YP_001457770.1| asparaginyl-tRNA synthetase [Escherichia coli HS]
 gi|162317582|ref|YP_852061.2| asparaginyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|170020668|ref|YP_001725622.1| asparaginyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170080588|ref|YP_001729908.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170682866|ref|YP_001744240.1| asparaginyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187733912|ref|YP_001880869.1| asparaginyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188493504|ref|ZP_03000774.1| asparaginyl-tRNA synthetase [Escherichia coli 53638]
 gi|191166973|ref|ZP_03028796.1| asparagine tRNA synthetase [Escherichia coli B7A]
 gi|191172150|ref|ZP_03033694.1| asparagine tRNA synthetase [Escherichia coli F11]
 gi|193064676|ref|ZP_03045755.1| asparagine tRNA synthetase [Escherichia coli E22]
 gi|193071677|ref|ZP_03052579.1| asparagine tRNA synthetase [Escherichia coli E110019]
 gi|194428351|ref|ZP_03060892.1| asparagine tRNA synthetase [Escherichia coli B171]
 gi|194438714|ref|ZP_03070801.1| asparagine tRNA synthetase [Escherichia coli 101-1]
 gi|209918181|ref|YP_002292265.1| asparaginyl-tRNA synthetase [Escherichia coli SE11]
 gi|215486055|ref|YP_002328486.1| asparaginyl-tRNA synthetase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218553517|ref|YP_002386430.1| asparaginyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218557835|ref|YP_002390748.1| asparaginyl-tRNA synthetase [Escherichia coli S88]
 gi|218688773|ref|YP_002396985.1| asparaginyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218694405|ref|YP_002402072.1| asparaginyl-tRNA synthetase [Escherichia coli 55989]
 gi|218700551|ref|YP_002408180.1| asparaginyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218704358|ref|YP_002411877.1| asparaginyl-tRNA synthetase [Escherichia coli UMN026]
 gi|227884104|ref|ZP_04001909.1| asparagine--tRNA ligase [Escherichia coli 83972]
 gi|238900188|ref|YP_002925984.1| asparaginyl tRNA synthetase [Escherichia coli BW2952]
 gi|253774041|ref|YP_003036872.1| asparaginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161044|ref|YP_003044152.1| asparaginyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256018811|ref|ZP_05432676.1| asparaginyl-tRNA synthetase [Shigella sp. D9]
 gi|256023368|ref|ZP_05437233.1| asparaginyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|260843180|ref|YP_003220958.1| asparaginyl tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260854222|ref|YP_003228113.1| asparaginyl tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260867102|ref|YP_003233504.1| asparaginyl tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|293404233|ref|ZP_06648227.1| asparaginyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|293409308|ref|ZP_06652884.1| asparaginyl-tRNA synthetase [Escherichia coli B354]
 gi|293414210|ref|ZP_06656859.1| asparaginyl-tRNA synthetase [Escherichia coli B185]
 gi|293433227|ref|ZP_06661655.1| asparaginyl-tRNA synthetase [Escherichia coli B088]
 gi|297519701|ref|ZP_06938087.1| asparaginyl-tRNA synthetase [Escherichia coli OP50]
 gi|298380016|ref|ZP_06989621.1| asparaginyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300824183|ref|ZP_07104302.1| asparaginyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300901637|ref|ZP_07119698.1| asparaginyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300902908|ref|ZP_07120853.1| asparaginyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300921031|ref|ZP_07137418.1| asparaginyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300925389|ref|ZP_07141275.1| asparaginyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300929628|ref|ZP_07145089.1| asparaginyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300937723|ref|ZP_07152525.1| asparaginyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300949703|ref|ZP_07163683.1| asparaginyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300955418|ref|ZP_07167794.1| asparaginyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300978402|ref|ZP_07174253.1| asparaginyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300983044|ref|ZP_07176420.1| asparaginyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|301022440|ref|ZP_07186321.1| asparaginyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|301023054|ref|ZP_07186863.1| asparaginyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|301047806|ref|ZP_07194859.1| asparaginyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|301302455|ref|ZP_07208586.1| asparaginyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301326646|ref|ZP_07219976.1| asparaginyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|301643452|ref|ZP_07243500.1| asparaginyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|306812616|ref|ZP_07446809.1| asparaginyl-tRNA synthetase [Escherichia coli NC101]
 gi|307137560|ref|ZP_07496916.1| asparaginyl-tRNA synthetase [Escherichia coli H736]
 gi|307311683|ref|ZP_07591323.1| asparaginyl-tRNA synthetase [Escherichia coli W]
 gi|309795082|ref|ZP_07689502.1| asparaginyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|312969004|ref|ZP_07783211.1| asparaginyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312971060|ref|ZP_07785239.1| asparaginyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331657002|ref|ZP_08357964.1| asparagine--tRNA ligase [Escherichia coli TA206]
 gi|331662346|ref|ZP_08363269.1| asparagine--tRNA ligase [Escherichia coli TA143]
 gi|331667311|ref|ZP_08368176.1| asparagine--tRNA ligase [Escherichia coli TA271]
 gi|67473033|sp|P0A8M0|SYN_ECOLI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|67473034|sp|P0A8M1|SYN_ECOL6 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|67473035|sp|P0A8M2|SYN_SHIFL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123048314|sp|Q0T6B1|SYN_SHIF8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123049323|sp|Q0TJC3|SYN_ECOL5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123084494|sp|Q1RDS7|SYN_ECOUT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123732380|sp|Q3Z3J0|SYN_SHISS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123741970|sp|Q31YR7|SYN_SHIBS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166980085|sp|A7ZK21|SYN_ECO24 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166980086|sp|A7ZYN3|SYN_ECOHS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083271|sp|B1IW01|SYN_ECOLC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|26107357|gb|AAN79540.1|AE016758_144 Asparaginyl-tRNA synthetase [Escherichia coli CFT073]
 gi|41000|emb|CAA48274.1| Asparaginyl-tRNA synthetase [Escherichia coli K-12]
 gi|147935|gb|AAA24666.1| asparaginyl-tRNA synthetase (asnS) [Escherichia coli]
 gi|1651455|dbj|BAA35682.1| asparaginyl tRNA synthetase [Escherichia coli str. K12 substr.
           W3110]
 gi|1787161|gb|AAC74016.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|30040711|gb|AAP16442.1| asparagine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56383325|gb|AAN42556.2| asparagine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|73854965|gb|AAZ87672.1| asparagine tRNA synthetase [Shigella sonnei Ss046]
 gi|81246083|gb|ABB66791.1| asparagine tRNA synthetase [Shigella boydii Sb227]
 gi|91071606|gb|ABE06487.1| asparagine tRNA synthetase [Escherichia coli UTI89]
 gi|110342719|gb|ABG68956.1| asparaginyl-tRNA synthetase [Escherichia coli 536]
 gi|110614487|gb|ABF03154.1| asparagine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|157066132|gb|ABV05387.1| asparagine tRNA synthetase [Escherichia coli HS]
 gi|157079180|gb|ABV18888.1| asparaginyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169755596|gb|ACA78295.1| asparaginyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|169888423|gb|ACB02130.1| asparaginyl tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170520584|gb|ACB18762.1| asparagine tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187430904|gb|ACD10178.1| asparaginyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|188488703|gb|EDU63806.1| asparaginyl-tRNA synthetase [Escherichia coli 53638]
 gi|190902967|gb|EDV62693.1| asparagine tRNA synthetase [Escherichia coli B7A]
 gi|190907677|gb|EDV67272.1| asparagine tRNA synthetase [Escherichia coli F11]
 gi|192927733|gb|EDV82348.1| asparagine tRNA synthetase [Escherichia coli E22]
 gi|192955001|gb|EDV85502.1| asparagine tRNA synthetase [Escherichia coli E110019]
 gi|194413566|gb|EDX29847.1| asparagine tRNA synthetase [Escherichia coli B171]
 gi|194422346|gb|EDX38346.1| asparagine tRNA synthetase [Escherichia coli 101-1]
 gi|209911440|dbj|BAG76514.1| asparaginyl-tRNA synthase [Escherichia coli SE11]
 gi|215264127|emb|CAS08471.1| asparaginyl tRNA synthetase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218351137|emb|CAU96841.1| asparaginyl tRNA synthetase [Escherichia coli 55989]
 gi|218360285|emb|CAQ97835.1| asparaginyl tRNA synthetase [Escherichia coli IAI1]
 gi|218364604|emb|CAR02290.1| asparaginyl tRNA synthetase [Escherichia coli S88]
 gi|218370537|emb|CAR18344.1| asparaginyl tRNA synthetase [Escherichia coli IAI39]
 gi|218426337|emb|CAR07162.1| asparaginyl tRNA synthetase [Escherichia coli ED1a]
 gi|218431455|emb|CAR12333.1| asparaginyl tRNA synthetase [Escherichia coli UMN026]
 gi|222032661|emb|CAP75400.1| Asparaginyl-tRNA synthetase [Escherichia coli LF82]
 gi|227838856|gb|EEJ49322.1| asparagine--tRNA ligase [Escherichia coli 83972]
 gi|238860020|gb|ACR62018.1| asparaginyl tRNA synthetase [Escherichia coli BW2952]
 gi|242376745|emb|CAQ31458.1| asparaginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253325085|gb|ACT29687.1| asparaginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253972945|gb|ACT38616.1| asparaginyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253977159|gb|ACT42829.1| asparaginyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|257752871|dbj|BAI24373.1| asparaginyl tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257758327|dbj|BAI29824.1| asparaginyl tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257763458|dbj|BAI34953.1| asparaginyl tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|260449924|gb|ACX40346.1| asparaginyl-tRNA synthetase [Escherichia coli DH1]
 gi|281600290|gb|ADA73274.1| Asparaginyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|284920781|emb|CBG33844.1| asparaginyl-tRNA synthetase [Escherichia coli 042]
 gi|291324046|gb|EFE63468.1| asparaginyl-tRNA synthetase [Escherichia coli B088]
 gi|291428819|gb|EFF01844.1| asparaginyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|291434268|gb|EFF07241.1| asparaginyl-tRNA synthetase [Escherichia coli B185]
 gi|291469776|gb|EFF12260.1| asparaginyl-tRNA synthetase [Escherichia coli B354]
 gi|294489526|gb|ADE88282.1| asparaginyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|298279714|gb|EFI21222.1| asparaginyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|299881239|gb|EFI89450.1| asparaginyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300300338|gb|EFJ56723.1| asparaginyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300307008|gb|EFJ61528.1| asparaginyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300317707|gb|EFJ67491.1| asparaginyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300354968|gb|EFJ70838.1| asparaginyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300397260|gb|EFJ80798.1| asparaginyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300405050|gb|EFJ88588.1| asparaginyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300409690|gb|EFJ93228.1| asparaginyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300412022|gb|EFJ95332.1| asparaginyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300418518|gb|EFK01829.1| asparaginyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300450907|gb|EFK14527.1| asparaginyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300457284|gb|EFK20777.1| asparaginyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300462405|gb|EFK25898.1| asparaginyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300523359|gb|EFK44428.1| asparaginyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300842294|gb|EFK70054.1| asparaginyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300846691|gb|EFK74451.1| asparaginyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|301078166|gb|EFK92972.1| asparaginyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|305853379|gb|EFM53818.1| asparaginyl-tRNA synthetase [Escherichia coli NC101]
 gi|306908238|gb|EFN38737.1| asparaginyl-tRNA synthetase [Escherichia coli W]
 gi|307552769|gb|ADN45544.1| asparaginyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307627642|gb|ADN71946.1| asparaginyl-tRNA synthetase [Escherichia coli UM146]
 gi|308121386|gb|EFO58648.1| asparaginyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|309701206|emb|CBJ00506.1| asparaginyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310336821|gb|EFQ01988.1| asparaginyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|312286406|gb|EFR14319.1| asparaginyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312945450|gb|ADR26277.1| asparaginyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|313650828|gb|EFS15229.1| asparaginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|315060215|gb|ADT74542.1| asparaginyl tRNA synthetase [Escherichia coli W]
 gi|315135578|dbj|BAJ42737.1| asparaginyl-tRNA synthetase [Escherichia coli DH1]
 gi|315257974|gb|EFU37942.1| asparaginyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|315287563|gb|EFU46969.1| asparaginyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315291191|gb|EFU50551.1| asparaginyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315296233|gb|EFU55540.1| asparaginyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|315619125|gb|EFU99705.1| asparaginyl-tRNA synthetase [Escherichia coli 3431]
 gi|320177121|gb|EFW52136.1| Asparaginyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320183830|gb|EFW58663.1| Asparaginyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|320196575|gb|EFW71198.1| Asparaginyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|323157179|gb|EFZ43302.1| asparaginyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323159559|gb|EFZ45539.1| asparaginyl-tRNA synthetase [Escherichia coli E128010]
 gi|323165404|gb|EFZ51191.1| asparaginyl-tRNA synthetase [Shigella sonnei 53G]
 gi|323174969|gb|EFZ60584.1| asparaginyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323175446|gb|EFZ61041.1| asparaginyl-tRNA synthetase [Escherichia coli 1180]
 gi|323185363|gb|EFZ70727.1| asparaginyl-tRNA synthetase [Escherichia coli 1357]
 gi|323190750|gb|EFZ76019.1| asparaginyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|323379225|gb|ADX51493.1| asparaginyl-tRNA synthetase [Escherichia coli KO11]
 gi|323938036|gb|EGB34298.1| asparaginyl-tRNA synthetase [Escherichia coli E1520]
 gi|323942846|gb|EGB39011.1| asparaginyl-tRNA synthetase [Escherichia coli E482]
 gi|323947281|gb|EGB43289.1| asparaginyl-tRNA synthetase [Escherichia coli H120]
 gi|323953361|gb|EGB49227.1| asparaginyl-tRNA synthetase [Escherichia coli H252]
 gi|323958236|gb|EGB53945.1| asparaginyl-tRNA synthetase [Escherichia coli H263]
 gi|323962922|gb|EGB58496.1| asparaginyl-tRNA synthetase [Escherichia coli H489]
 gi|323967177|gb|EGB62601.1| asparaginyl-tRNA synthetase [Escherichia coli M863]
 gi|323973195|gb|EGB68387.1| asparaginyl-tRNA synthetase [Escherichia coli TA007]
 gi|324009869|gb|EGB79088.1| asparaginyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324012919|gb|EGB82138.1| asparaginyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324019059|gb|EGB88278.1| asparaginyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324117205|gb|EGC11113.1| asparaginyl-tRNA synthetase [Escherichia coli E1167]
 gi|327253720|gb|EGE65349.1| asparaginyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|331055250|gb|EGI27259.1| asparagine--tRNA ligase [Escherichia coli TA206]
 gi|331060768|gb|EGI32732.1| asparagine--tRNA ligase [Escherichia coli TA143]
 gi|331065667|gb|EGI37560.1| asparagine--tRNA ligase [Escherichia coli TA271]
 gi|332342373|gb|AEE55707.1| asparaginyl-tRNA synthetase AsnS [Escherichia coli UMNK88]
 gi|332759018|gb|EGJ89328.1| asparaginyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332760113|gb|EGJ90411.1| asparaginyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332762702|gb|EGJ92965.1| asparaginyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332767717|gb|EGJ97908.1| asparaginyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333001235|gb|EGK20803.1| asparaginyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333006157|gb|EGK25666.1| asparaginyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333008916|gb|EGK28376.1| asparaginyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333020053|gb|EGK39324.1| asparaginyl-tRNA synthetase [Shigella flexneri K-304]
 gi|333020226|gb|EGK39496.1| asparaginyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 466

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LERFIEADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R  +  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|325978710|ref|YP_004288426.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325178638|emb|CBZ48682.1| asparaginyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 448

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 117/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   +  RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDHRHLWLRSR--KQMAIMQVRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +      +      +     +AE F R +  D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALEI-LERDVDLLKKYIAEPFKRVSYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            + L   +  +                      D F       I    G+   T +  YP
Sbjct: 295 ISLLQEHENDEDA------------DYEHLEHGDDFGSPHETWISNYFGV--PTFVINYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   +   + +   +  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSVREDDYNALVAKMDALEMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          +G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEY-EFYLDLRKYGSVPHAGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|261821337|ref|YP_003259443.1| asparaginyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605350|gb|ACX87836.1| asparaginyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 466

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 108/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A    ++ F   +R        H
Sbjct: 185 ENLPRTEQGKVDFSEDFFGKEAFLTVSGQLNGETYACA-LSNVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  S + +     N+++   +       + +  +   F+E         
Sbjct: 244 LAEFWMIEPEVAFASLDDVAGLAENLLKYVFQAV----LNERADDMAFFAERVDKEAVTR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ + D           D           G +  +   W    S      +       
Sbjct: 300 LEKFVSSDFAQV-------DYTDAVEILLNCGQQFENPVYWGVDLSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R   ++ 
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERL-AQLD 404

Query: 294 EKKKIYNETYPI---DEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +     E   +   D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 405 SR----LEEMGLNKEDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|194434376|ref|ZP_03066639.1| asparagine tRNA synthetase [Shigella dysenteriae 1012]
 gi|194417360|gb|EDX33466.1| asparagine tRNA synthetase [Shigella dysenteriae 1012]
 gi|332095876|gb|EGJ00883.1| asparaginyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 466

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LERFIEADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R  +  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|332993840|gb|AEF03895.1| asparaginyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 465

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/356 (16%), Positives = 108/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       RN +  ++  +F E     + +  L  S       +   ST   
Sbjct: 124 AHLRPRTNVIGAVTRVRNCLSQAIHRFFHERGHFWVSTPILTASDTEGAGEMFRVSTLDM 183

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  YL  S + + +    A   K++ F   +R        H
Sbjct: 184 MNLPLDDKGNVDYSEDFFGKETYLTVSGQLNVETYCTAMS-KVYTFGPTFRAENSNTSRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      + +   ++++   +   +++      + N F++       E 
Sbjct: 243 LAEFWMIEPEVAFADLSDIAQLAEDMLKYVCKAVLEEL----PDDMNFFAQRIKKDAVER 298

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             +  + D        D  D   +    ++          W    S      +       
Sbjct: 299 LEKLVSSDFVR----MDYTDAIDILQNCKK---TFEFPVEWGIDLSSEHERYLAEEHVGA 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R E+  
Sbjct: 352 PIIMQ-NYPKDIKAFYMRINDDGKTVAAMDVLAPGIGEIIGGSQREERLDVFDARLEEME 410

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+   +  +  D             SG  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 411 LSKE---DYAWYRDLR----RYGTVPHSGFGLGFERLVAYVTGMQNVRDVIPFPRT 459


>gi|325496868|gb|EGC94727.1| asparaginyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 466

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LERFIEADFAQV-------DYTDAVTILENCGKKFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R  +  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|165976090|ref|YP_001651683.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|303252406|ref|ZP_07338572.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247646|ref|ZP_07529687.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|259511565|sp|B0BNV4|SYN_ACTPJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|165876191|gb|ABY69239.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|302648865|gb|EFL79055.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306855814|gb|EFM87976.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 467

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 107/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ESLPRTDEGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++   +   ++             + + IT  E 
Sbjct: 245 LAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHIDK-DVITRLEN 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F                Q D         ++G       +W    S      +      +
Sbjct: 304 F----------IASPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDT 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++     P D  +   L        SG  +GF+RL++ VTG  NI EVI  P 
Sbjct: 407 RMVEMGL--NPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPR 460


>gi|4455210|emb|CAB36533.1| putative aspartate-tRNA ligase [Arabidopsis thaliana]
 gi|7269540|emb|CAB79542.1| putative aspartate-tRNA ligase [Arabidopsis thaliana]
          Length = 504

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 101/335 (30%), Gaps = 55/335 (16%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  +Q + REY     F+EI +  L    S G     R         D+  +P 
Sbjct: 214 QAIFRIQCQVQIAFREYLQSKGFLEIHTPKLIAGSSEGGSAVFR--------LDYKGQPA 265

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  +     ++F     +R  +     H  EF  L+           ++ 
Sbjct: 266 CLAQSPQLHKQMAICGDMRRVFEVGPVFRAEDSFTHRHLCEFVGLDVE-------MEIRM 318

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
             + I          IF+     C    E           + A  ++    D   + +R 
Sbjct: 319 HYSEIMDLVGELFPFIFTKIEERCPKELESVRKQYPFQSLKEAGEEVDPLGDLNTESERK 378

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
           L  L  ++                                 +L RYP+         Y  
Sbjct: 379 LGQLVLEKYKTEF---------------------------YMLHRYPSAVRPFYTMPYEN 411

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           D  ++  F+++    E+ +    + DP     R       ++   +        ++    
Sbjct: 412 DSNYSNSFDVFIRGEEIMSGAQRIHDPELLEKR------ARECGID--VKTISTYIDAFR 463

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              P   G  +G +R+VML+   NNI +    P  
Sbjct: 464 YGAPPHGGFGVGLERVVMLLCALNNIRKTSLFPRD 498


>gi|298372906|ref|ZP_06982896.1| asparagine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275810|gb|EFI17361.1| asparagine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 465

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 105/357 (29%), Gaps = 40/357 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++  +F    F+   +  +  S       +   +T+  
Sbjct: 121 AHLRPRTNTFGAIFRMRHQMAMAIHTFFHTRGFVYFHTPIITASDCEGAGQMFQVTTQNL 180

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   +P  L  S +    +L A     I+ F   +R        H
Sbjct: 181 YNLKKDESGQIDYSSDFFGQPTALTVSGQL-EGELGAMALGAIYTFGPTFRAENSNTPRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E+ M+   + ++     A          +    ++     + + 
Sbjct: 240 LAEFWMIEPEVAFIEIEENMQLAQDFVQFCVNWA----LEHCREDIEFLAKMYDNELIDR 295

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                  D               +  +A   G +  +   W           +  +    
Sbjct: 296 LRFVVENDFVRLTYTEGIE----ILKKAVAKGKKFEYPVDWGTDLQSEHERYLVEDYFKK 351

Query: 234 CCTILDRYPAPESALANIYPADPRFT-KRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
              IL  YP    +       D +       L+    E+        D  + R R E+  
Sbjct: 352 PV-ILTDYPKDIKSFYMKQNDDGKTVRAMDVLFPRIGEIIGGSQREEDYEKLRRRAEE-- 408

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +   T  I   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 409 -----MGVPTKDI-WWYLDTRRFGTAPHSGFGLGFERLMLFVTGMQNIRDVIPFPRT 459


>gi|288929148|ref|ZP_06422993.1| asparagine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329250|gb|EFC67836.1| asparagine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 467

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 117/361 (32%), Gaps = 42/361 (11%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
            +  H R R       +  R+ +  ++ +YF E+ F    +  +  S       +  F  
Sbjct: 120 RQHAHLRLRTNTFGAVMRIRHNMAIAIHQYFHEHGFFYFHTPIITASDAEGAGEM--FQV 177

Query: 65  ELIIQDHIRKP----------LY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
                D ++K            +     L  S +   +    A   +I+ F   +R    
Sbjct: 178 TTKKLDDLKKDEDGKVNYNDDFFGKMTSLTVSGQLEGELGATA-LGQIYTFGPTFRAENS 236

Query: 110 -GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A    + LM    + I+     A          +    ++    
Sbjct: 237 NTPRHLAEFWMIEPEMAFIDLDDLMDTEEDFIKYCVHWA----LDNCKDDLAFLNKMIDN 292

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T+ E      + +        D  +   +  +A +AG +     +W    +      +  
Sbjct: 293 TLIERLQGVVSEEFVRL----DYTEGINILEEAVKAGKKFEFPVSWGMDLASEHERFLVE 348

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                   I+  YP    A       D R  +  ++    I       E++    +   +
Sbjct: 349 EHFKKPV-IMTHYPKGIKAFYMKLDEDGRTVQGTDVLFPQI------GEIIGGSVREENY 401

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +K + + ++ +     +   +L           G  +GF+RL++ VTG  NI +VI  P 
Sbjct: 402 DKLVAQIEERHIPMKDM-WWYLDTRRFGSCPHGGFGLGFERLILFVTGMQNIRDVIPFPR 460

Query: 348 S 348
           +
Sbjct: 461 T 461


>gi|254575085|pdb|3I7F|A Chain A, Aspartyl Trna Synthetase From Entamoeba Histolytica
 gi|254575086|pdb|3I7F|B Chain B, Aspartyl Trna Synthetase From Entamoeba Histolytica
          Length = 548

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 104/350 (29%), Gaps = 46/350 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRA 61
           D     R               ++      RE+    +F+EI +  L   S    ++I  
Sbjct: 225 DTRLDNRMLDLRTVTNIAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSSEGGSNI-- 282

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
           F  +     +  +  YL  SP+   +  +     K+F     +R        H  EF  L
Sbjct: 283 FEVK-----YFDRKAYLAQSPQLYKQMAIMGDFRKVFEVGPVFRAENSNTRRHLTEFEGL 337

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +             D M  +         K F  +          E +            
Sbjct: 338 DIEMEIVENYHECIDVMEKLFTFIFDEIPKRFPDELKVIRKQYPFEDL------------ 385

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                     +          + +G  +   D ++      L E I+     +   ILD+
Sbjct: 386 ----IYRPFLRLTYKEAIEMLRASGETIGDYDDFTTPQEVKLGELIKAKYNTD-FYILDK 440

Query: 241 YPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           +PA            DP ++  ++++    E+ +    + DP     R  +      K  
Sbjct: 441 FPAAIRPFYTMPDIDDPNYSNSYDVFVRGQEITSGAQRIHDPEFLMKRCIE------KGV 494

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +      +D++          +G  +G +R+ ML  G  NI +V   P  
Sbjct: 495 DPATL--KDYIESFRFGSWPHAGCGIGLERITMLYLGIPNIRKVTLFPRD 542


>gi|239636872|ref|ZP_04677871.1| asparaginyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239597546|gb|EEQ80044.1| asparaginyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|330685007|gb|EGG96682.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 430

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 104/350 (29%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F EN F +ID   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   ++F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDEDAFLSQSGQLYMEAAAMAH-GRVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   + + ++     +    +   +                      +   +  + D
Sbjct: 224 PEMAFTEHAESLEVQEQYVAHVVQSVLKNC--------------------QLELKALDRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 264 TSKLEKVAAPFPRITYDDAVKFLKEEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P +       +L A     E+    + + D      R  +      ++
Sbjct: 322 PTKIKPFYMQPNPDNEDTVLCADLIAPEGYGEIIGGSERINDLELLEQRINE-----HEL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D           SG  +G +R V  ++G  ++ E    P  
Sbjct: 377 DPEAYSYYLDLRR--YGSVPHSGFGLGLERTVAWISGVEHVRETSPFPRL 424


>gi|15602508|ref|NP_245580.1| asparaginyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720918|gb|AAK02727.1| AsnS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 471

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 113/361 (31%), Gaps = 53/361 (14%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 130 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 189

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 190 ENLPRDDKGAVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 248

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++       +                E     + 
Sbjct: 249 LAEFWMVEPEIAFATLADNAKLAEDMLKYVFRAVLE----------------ERKDDLKF 292

Query: 174 FARYANIDLGTTLDNPDQPDRHLL-----YLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           F ++ + D+ + L+N    D   +          Q+G +     +W    S      +  
Sbjct: 293 FEKHVDNDVISRLENFINSDFAQIDYTDAIEVLLQSGKKFEFPVSWGIDLSSEHERYLAE 352

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +   +   YP    A       D +             L     E++   ++  R 
Sbjct: 353 EHFKSPVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERL 405

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +   +   ++     P D  +   L        +G  +GF+RL++ VTG  NI +VI  P
Sbjct: 406 DVLDKRMIEMGL--NPEDYWWYRDLRRYGTVPHAGFGLGFERLIVYVTGVQNIRDVIPFP 463

Query: 347 F 347
            
Sbjct: 464 R 464


>gi|71400970|ref|XP_803219.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70865990|gb|EAN81773.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 564

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 113/360 (31%), Gaps = 37/360 (10%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W              ++ +    R++ +++ F+EI S  +  +  +E     F       
Sbjct: 215 WLDLRTPASNAIFKVQSRVGQYFRQFLMDHDFVEIHSPKII-AAASEGGANVFKV----- 268

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHES 128
            +  +  YL  SP+   +  L    +++F     +R        H  EF  L+       
Sbjct: 269 GYFNRDAYLAQSPQLYKQMALQGDLKRVFEVGPVFRAENSNTHRHLTEFVGLDVEMRINE 328

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +   + D    + C       K  + +          E +       +   + +G   D+
Sbjct: 329 HYYEVLDTAEELFCYIFAQLAKH-TGELEAICRQYPFEPLLWQLTPEKIKELGVGVIEDS 387

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIF------------------SRILIEKIEPNL 230
            +  D +   ++     +   H      +                    ++L + ++   
Sbjct: 388 VEPTDIYKARVRNMGTRMLRIHYPHCIALLNTVLEEKLSLTDDINTTNEKLLGKLVKERY 447

Query: 231 GINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
           G++   I D +P          +P D RFT  ++++    E+ +    + D      R  
Sbjct: 448 GVD-FFISDLFPTAARPFYTMPFPDDERFTNSYDMFIRGEEISSGAQRIHDSSLLLKR-- 504

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +   +        +D++           G  +G +R+VML  G  N+  V   P  
Sbjct: 505 ---AQSLGVDLSPI---KDYVDSFRLGAWPHGGFGVGLERVVMLYLGLCNVRLVSLFPRD 558


>gi|307249880|ref|ZP_07531854.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858069|gb|EFM90151.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 467

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 107/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRTDEGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++   +   ++             + + IT  E 
Sbjct: 245 LAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHIDK-DVITRLEN 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F                Q D         ++G       +W    S      +      +
Sbjct: 304 F----------IASPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDT 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++     P D  +   L        SG  +GF+RL++ VTG  NI EVI  P 
Sbjct: 407 RMVEMGL--NPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPR 460


>gi|224091371|ref|XP_002309236.1| predicted protein [Populus trichocarpa]
 gi|222855212|gb|EEE92759.1| predicted protein [Populus trichocarpa]
          Length = 469

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/381 (14%), Positives = 112/381 (29%), Gaps = 53/381 (13%)

Query: 3   QIPSQPWWNR----DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            IP             H R R          RN +  +   +F E+ F+ + +  +  S 
Sbjct: 99  PIPKTKLSLEFLRDHIHLRARTNTISAVARIRNALAFATHSFFQEHGFLYVHTPIITTSD 158

Query: 53  --PGNE-----------------THIRAFSTELIIQDHIRKPLY-----LQTSPEFSCKK 88
                E                   ++    +   +    +  +     L  S +   + 
Sbjct: 159 CEGAGEMFQATTLIKNLSRVEERAKLKPGIPKKDGKIDYGQDFFSRQAFLTVSGQLQVET 218

Query: 89  LLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
              A    ++ F   +R        H  EF M+E   A    +  M      ++   +  
Sbjct: 219 YACAVS-SVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADLQDDMNCAEAYVKYMCQWL 277

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
             K F    +    + +               +   T  +     +   L  +A + G  
Sbjct: 278 LNKCFDDMELMAKLYDK--------GCIDRLRMVSSTPFERISYTEAVQLLEEAVRGGKE 329

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
              +  W    +      +  ++      I+  YP    A       D +     ++   
Sbjct: 330 FEKNVEWGIDLASEHERYLTEDIFKKPV-IVYNYPKGIKAFYMRLNDDSKTVAAMDILVP 388

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGF 326
            +       EL+   ++  R+E   Q   ++     P  E +L        +  G  +GF
Sbjct: 389 KV------GELIGGSQREERYEVIQQRIAEMGLPIEPY-EWYLDLRRYGTVKHCGFGLGF 441

Query: 327 DRLVMLVTGANNINEVIWTPF 347
           +R+++  TG +NI +VI  P 
Sbjct: 442 ERMILFATGIDNIRDVIPFPR 462


>gi|134299144|ref|YP_001112640.1| asparaginyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044276|sp|A4J412|SYN_DESRM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|134051844|gb|ABO49815.1| asparaginyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 429

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/350 (18%), Positives = 111/350 (31%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+   L  R  I+ + R++F +N F  +DS  +  +    T      
Sbjct: 114 MDRRHLWMRT--PRQNAILRIRAEIEQAARDFFNQNDFTLVDSPIITPAACEGT------ 165

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T L   D+  +  YL  S +   +    A   +++CF   +R  +     H  EF M+E 
Sbjct: 166 TTLFELDYHGEKAYLSQSGQLYNEASAMAV-GRMYCFGPTFRAEKSKTRRHLMEFWMIEA 224

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E  MK    ++    +   ++                              D+
Sbjct: 225 EAAFFDFEDNMKLQEEMVYFIVQRVLERRR--------------------QDLELLGRDI 264

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L+    P   L Y +A +          W + F       I  N        + RYP
Sbjct: 265 SK-LEAIKLPFPRLSYTEAVELLKSKGEAFEWGEDFGAPHETIISENFES--PVFIHRYP 321

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
               +      P D R     +L A     E+      + D      R E+    K+   
Sbjct: 322 TEIKAFYMKPDPEDGRVVLGADLIAPEGYGEMIGGGQRIDDLQLLEQRLEEHKLPKEAF- 380

Query: 300 NETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  E +L          SG  +G +R V  +   +++ E I  P  
Sbjct: 381 -------EWYLDLRRYGSVPHSGFGLGLERTVAWICKLDHVRETIPYPRM 423


>gi|288556137|ref|YP_003428072.1| asparaginyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288547297|gb|ADC51180.1| asparaginyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 430

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 106/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +N F ++D   L   +P         
Sbjct: 114 MDHRHLWLRSK--RQHAVMKVRNEIIRATYEFFNQNDFAKVDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  YL  S +    +  A    ++F F   +R  +     H  EF M+E
Sbjct: 165 TTELFATKYFDEDAYLSQSGQLYM-EAAAMALGRVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +++ ++     +   A+   +                      +   +    D
Sbjct: 224 PEMAFVEFDESLEIQEQYVSYLAKSVLENC--------------------QLELKTLGRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R            +   D  W D F       I  +   +    +  Y
Sbjct: 264 TEKLEKVQAPFPRISYDDAITFLHEKGFDDIKWGDDFGAPHETAIAEHY--DKPVFITHY 321

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P             P   +   +   ++       E++       R       +++I   
Sbjct: 322 PTSLKPFYMQ----PDANREDVVLCADLIAPEGYGEIIGGS---ERIHSYELLEQRINEH 374

Query: 302 TYPID--EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +D  + +L          SG  +G +R V  ++G  ++ E I  P  
Sbjct: 375 NLSLDTYQWYLDLRKYGSVPHSGFGLGLERTVAWLSGVEHVRESIPFPRL 424


>gi|307565245|ref|ZP_07627739.1| asparagine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346058|gb|EFN91401.1| asparagine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 463

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 110/353 (31%), Gaps = 39/353 (11%)

Query: 13  DFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
               R   F      R+ +  ++  YF E+ F    +  +  S      ++  F    + 
Sbjct: 121 HMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGNM--FQVTTLD 178

Query: 69  QD--------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
            D           +  +     L  S +   +    A    I+ F   +R        H 
Sbjct: 179 LDRIAKSGKVEYEQDFFGKRTHLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPRHL 237

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A     +LM    + I+     A          + +  ++    T+ +  
Sbjct: 238 AEFWMVEPEVAFIDLPELMDLEEDFIKYCVRWA----LEHCKDDLDFLNKMIDHTLIDRL 293

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGI 232
                 D               +  +AQ+ G++          D+ S      +E +   
Sbjct: 294 EGVLKEDFVRLSYTEGFN----ILKEAQEKGVKFEFPVTTWGMDLSSEHERYLVEDH--F 347

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               I+  YPA   +       D +  +  ++    I       E++    +   ++K +
Sbjct: 348 KRPVIMSNYPAEIKSFYMKKNEDGKTMQGTDVLFPRI------GEIIGGSIREESYDKLL 401

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           QE ++   +                   G  +GF+RL++ VTG  NI +VI  
Sbjct: 402 QEIEQRGMKAEQYSWYLDTRKYGTCPHGGFGLGFERLILFVTGMQNIRDVIPF 454


>gi|126327787|ref|XP_001377539.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 479

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 47/346 (13%), Positives = 93/346 (26%), Gaps = 28/346 (8%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIR----AFS 63
                R       L  R+    ++  +F  N +I I +  +  +       +     +  
Sbjct: 145 PHLRCRTNALGSILRVRSEATDAIHSFFKANGYIHIHTPVITSNDCEGAGELFQVEPSSK 204

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +   ++    P +L  S +    ++++    ++F F   +R        H  EF M+E 
Sbjct: 205 VKETGKNFFDVPAFLTVSAQLHL-EVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEA 263

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +     Q +   M  +                   + F  P      E   +      
Sbjct: 264 EMSFVESLQDLMQIMETLFKTTTETVLSNCPEDVELLHKFIAPGQKDKVEQMLK------ 317

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
               +              ++A         W         + +    G      +  YP
Sbjct: 318 ----NKFLIISYTEAIEILKKASQNFTFTPKWGLDLQTEHEKYLVKYCGDIPV-FVINYP 372

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                       D        +      L     EL     +  RF    Q  +++    
Sbjct: 373 FDLKPFYMRDNEDEPQHTVAAV----DLLVPGVGELFGGSLREERFHLLQQRLERLGL-- 426

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               + +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 427 MDTYQWYLDLRQFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 472


>gi|28377778|ref|NP_784670.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|38258538|sp|Q88Y40|SYN1_LACPL RecName: Full=Asparaginyl-tRNA synthetase 1; AltName:
           Full=Asparagine--tRNA ligase 1; Short=AsnRS 1
 gi|28270611|emb|CAD63517.1| asparagine--tRNA ligase [Lactobacillus plantarum WCFS1]
          Length = 431

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 107/349 (30%), Gaps = 42/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R    +  RN +  ++ E+F +  FI+ID+  L   +P         
Sbjct: 115 LDHRHLWLRSS--RPNAIMRIRNEVIRAVYEFFNDRGFIKIDAPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +  YL  S +    +  A    KIF F   +R  +     H  EF  LE
Sbjct: 166 TTELFKTDYFGQDAYLSQSGQLY-GEAGAMAFGKIFTFGPTFRAEKSKTRRHLTEFWQLE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ ++    ++    +                      I          + D
Sbjct: 225 PEMAWMHQDESLEVQEQLVAYLGQAV--------------------IDHCPHELAVLDRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + T       P   + Y  A         D  W   F       +  +   +    +  Y
Sbjct: 265 VATLQKYTKLPFPRVSYDDAITLLQANGFDVDWGVDFGSPEETFLAEH--FDQPVFVLNY 322

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L            E++   E+   ++   +       
Sbjct: 323 PKAIKAFYMQAHPTRDDVVIAADL-----LAPEGYGEIIGGSERSTDYDYLKERLLASGQ 377

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     E +L          SG  MG +R +  +T  +++ E I  P  
Sbjct: 378 DLQDY-EWYLDLRKYGSVPHSGFGMGLERFLAWITLQDHVRETIPFPRM 425


>gi|223994379|ref|XP_002286873.1| aspartate-trna ligase [Thalassiosira pseudonana CCMP1335]
 gi|220978188|gb|EED96514.1| aspartate-trna ligase [Thalassiosira pseudonana CCMP1335]
          Length = 475

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/347 (16%), Positives = 111/347 (31%), Gaps = 36/347 (10%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTE 65
              W        +     ++M+ +  REY ++  FIEI +   L  +            +
Sbjct: 154 DHRWIDLRTPANQSIFRIQSMVCTLFREYLLKQNFIEIHTPKILSGASEGGA-------D 206

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           +   D+  KP  L  SP+   +      G E++F     +R        H  EFT L+  
Sbjct: 207 VFTLDYFGKPACLSMSPQLHKQMAAACGGFERVFEIGPVFRAENSNTRRHLCEFTGLDLE 266

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A   +   + D +  +        ++    +                E        +  
Sbjct: 267 MAIMEHYDEVLDVLGELFVYIFDGLKEKCGQE---------------LERIKEQHGFEDL 311

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
             L    + D        ++AG+     D  S    + L + ++     +   I+D+YP 
Sbjct: 312 QYLRKTLKIDYATGCRLLREAGVDQDDLDDLSTENEKKLGDIVKEKYNTD-FYIMDKYPL 370

Query: 244 PESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                     P +P+ +  ++++    E+ +    + +      R      +   I  ET
Sbjct: 371 SVRPFYTMPDPNNPKLSNSYDIFIRGQEILSGAQRIHETGLLEER-----AKAWGIDLET 425

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +L           G  +G +R+VML  G  NI +    P  
Sbjct: 426 I---SAYLDAFRNGALPHGGGGIGMERVVMLYLGLPNIRKSSMFPRD 469


>gi|330835726|ref|YP_004410454.1| aspartyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329567865|gb|AEB95970.1| aspartyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 429

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/346 (17%), Positives = 110/346 (31%), Gaps = 53/346 (15%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                +  +  ++    + RE   +N F EI +   +         +           + 
Sbjct: 126 RRQEMQAMIRIQSTAVKTFREVLYKNGFYEIFTPKIIATGTEGGAQLFPVI-------YF 178

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            K  +L  SP+   K+LLA+  E++F  A AWR  E     H  EF  ++   A   Y  
Sbjct: 179 GKEAFLAQSPQLY-KELLASAVERVFEIAPAWRAEESDTPYHLAEFVSMDVEMAFADYND 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSF----QNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
           +M     I+    +   +          +   +     + +T  E               
Sbjct: 238 VMNVVEEIMVNVLQNVAKHNQEDLAILGHRLPSISRPIKRVTYRE--------------- 282

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                         Q  G+ V   D      SRIL + +E          +  +PA    
Sbjct: 283 ---------ALEILQSQGLNVKFGDDIGTPESRILNKVLE-----QDIYFIIDWPASARP 328

Query: 248 LA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                   D   ++ F+L    +EL +           R   E   + + +  N      
Sbjct: 329 FYTRRKEGDNNISESFDLIYRWLELVSGSSRNNT----REVLE--SELRARGLNPVSF-- 380

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           E FL      +P  +G  MG  R ++++TG  ++ EV   P  +  
Sbjct: 381 EFFLKWFDYGIPPHAGFGMGLQRFMLMLTGLQSVKEVSLFPRDKKR 426


>gi|315634321|ref|ZP_07889608.1| asparagine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476911|gb|EFU67656.1| asparagine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 467

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 109/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRTDKGAVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F++     V   
Sbjct: 245 LAEFWMIEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RRDDLEFFAKHVDGDVINR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D         ++        +W    S      +      +
Sbjct: 301 LERFIHSDFAQV-------DYTDAIEILLKSSKTFEFPVSWGIDLSSEHERYLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +++     P D  +   L        SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 407 RMEEMGL--NPEDYWWYRDLRRYGTVPHSGFGLGFERLIVYVTGLQNIRDVIPFPR 460


>gi|170083987|ref|XP_001873217.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650769|gb|EDR15009.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 538

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 109/335 (32%), Gaps = 32/335 (9%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I    REY   + FIEI S  LQ +   E+    F       +      Y
Sbjct: 226 SQAIFKIQSAIGDLFREYLSSHGFIEIHSPKLQGAA-TESGASVFKVGYFKGNA-----Y 279

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +AA  E+++     +R  +     H  EF  L+     E +   + + 
Sbjct: 280 LGQSPQLAKQMAIAADFERVYEIGPVFRAEDSNTHRHLTEFIGLDLEMTIEEHYHEVLEV 339

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +  +     ++ ++ +          +     E             L+   +     
Sbjct: 340 LDGLFLSIFRGLREKYTKEIGVVQKQFPADDFKWRE------------GLEGTLRLTFRE 387

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                 + G+R    D +S    + L   I+     +   I+D++P             D
Sbjct: 388 AVDILVEDGVRREDLDDFSTENEKRLGRLIKAKYDTD-YYIIDKFPMALRPFYTMRDSED 446

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACLT 314
           P  +  ++ +    E+ +    + DP             + K    E+      ++    
Sbjct: 447 PTLSNSYDFFMRGEEILSGAQRIHDPAVLCE------AMRSKGVDPESMKP---YVDGFR 497

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  G  +G +R+VML    NNI      P  
Sbjct: 498 MGCNPHGGGGIGLERVVMLFLKLNNIRRASLFPRD 532


>gi|319953566|ref|YP_004164833.1| asparaginyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319422226|gb|ADV49335.1| Asparaginyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 477

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/377 (16%), Positives = 119/377 (31%), Gaps = 44/377 (11%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R       +  R+ +  ++  YF  N F  + +  +  S    
Sbjct: 106 PKKHSLEFLREKAHLRVRTNTFAAVMRVRSTLSFAVHRYFQNNGFYNVHTPIITGSDAEG 165

Query: 56  ETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
              +   ST                 QD   K   L  S +   +    A   K++ F  
Sbjct: 166 AGEMFRVSTLDQKKPPLNDAGEIDFKQDFFGKETNLTVSGQLEAETYAMA-LGKVYTFGP 224

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A    +  M    + I+       +            
Sbjct: 225 TFRAENSNTSRHLAEFWMIEPEVAFNDLDANMDLAEDFIKDVINYILEHCAEDLKFLEQR 284

Query: 162 FSEPEYITVAEAFA--------RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
             + E        +        ++   +    +   +  D        ++   +   ++ 
Sbjct: 285 LIDEEKSKPQAERSDMPLIEKLKFVAENNFKRVSYTEAIDILKSSTPNKKKKFKYIIEEW 344

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
            +D+ S      +E +    C  IL  YPA   A       D +  +  ++    I    
Sbjct: 345 GADLQSEHERFLVEKH--FKCPVILFDYPAKIKAFYMRLNDDGKTVRAMDILFPGI---- 398

Query: 274 ACDELLDPIEQRHRFEKEMQE-KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
              E++   ++  R +  +++ K+   +E       +L          SG  +GF+RLV+
Sbjct: 399 --GEIVGGSQREERLDVLLEKIKELGIDEEEL--WWYLDLRKFGTAVHSGFGLGFERLVL 454

Query: 332 LVTGANNINEVIWTPFS 348
             TG  NI +VI  P +
Sbjct: 455 FATGMGNIRDVIPFPRT 471


>gi|70606564|ref|YP_255434.1| aspartyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|68567212|gb|AAY80141.1| aspartyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 428

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/341 (18%), Positives = 115/341 (33%), Gaps = 43/341 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                +  L  +N+   S RE   +  F+E+ +   +  +      + +         + 
Sbjct: 125 RRQEMQSILKIQNITLKSFRETLYKEGFVEVFTPKIIASATEGGAQLFSVI-------YF 177

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            +  +L  SP+   K+LLA   EK+F  A AWR  +     H  EF  ++   A  +YE 
Sbjct: 178 GETAFLAQSPQLY-KELLAGVVEKVFEIAPAWRAEDSDTPYHLAEFISMDVEMAFGNYED 236

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            MK    +I         +      +  +                         L +   
Sbjct: 237 AMKLLEKLIYNIVNSVKNEASDELKILSHN------------------------LPDVKI 272

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
           P + L Y  A +      ++  + D         +   L  +   I D            
Sbjct: 273 PIKRLTYKDAIEILQSKGYNIKFGDDIGTPESRVLYNELKEDLYFITDWPTLSRPFYTKS 332

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              DP  ++ F+L    +E+ +          +R   E     +K+         E FL 
Sbjct: 333 KDTDPNVSESFDLIYRWLEIASGSTRNH----KREVLED--SLRKRGLKPENF--EFFLR 384

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                MP  +G  MGF RL++++TG +N+ E++  P  +  
Sbjct: 385 WFDYGMPPHTGFGMGFARLLVMLTGIHNVKEIVPFPRDKKR 425


>gi|70945583|ref|XP_742595.1| aspartyl-tRNA synthetase [Plasmodium chabaudi chabaudi]
 gi|56521667|emb|CAH75640.1| aspartyl-tRNA synthetase, putative [Plasmodium chabaudi chabaudi]
          Length = 417

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/336 (13%), Positives = 108/336 (32%), Gaps = 36/336 (10%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
               ++ I    R Y ++N F EI +   L  S     +           ++  +  +L 
Sbjct: 104 IFYLQSEICKIFRNYLIDNNFTEIHTPKLLGESSEGGANA-------FQINYFNQNGFLA 156

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQLMKDCM 137
            SP+   +  + +G +++F  A  +R        H  E+  L+    +   Y + +    
Sbjct: 157 QSPQLYKQMCINSGFDRVFEIAPVFRAENSNTYRHLCEYVSLDVEMTYKFDYMENVYFYD 216

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           ++ +                     +E   + +     +Y + D       P       +
Sbjct: 217 SMFKNIFNKL-------------VNNEKNQLFIKNIKNQYPSEDFKWLAVTPIFTYEQAI 263

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIE---KIEPNLGINCCTILDRYPAPESALA-NIYP 253
            +  +   + +  ++  +   +  + +   KI          I+  +P+           
Sbjct: 264 KILIEHKKLNLQPEEILTYDMTTDMEKELGKIIKQTHNTDYYIIINFPSGLRPFYTMYNE 323

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
            DP+ +  ++ +    E+ +    + D        +K     KK+          ++   
Sbjct: 324 EDPKISNSYDFFMRGEEILSGSQRISDVKVLLDNIKKFNLNPKKLD--------FYIDSF 375

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  SG  +G +R++ML  G NNI +    P  
Sbjct: 376 AYSSYPHSGCGIGLERVLMLFLGLNNIRKTSLFPRD 411


>gi|330797506|ref|XP_003286801.1| hypothetical protein DICPUDRAFT_150804 [Dictyostelium purpureum]
 gi|325083244|gb|EGC36702.1| hypothetical protein DICPUDRAFT_150804 [Dictyostelium purpureum]
          Length = 464

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 111/362 (30%), Gaps = 36/362 (9%)

Query: 3   QIPSQPWW---NRD-FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +       R+  H R R          RN     + +YF +N FI + +  +  S 
Sbjct: 115 PLQPKHHTFEFLREIAHLRSRGNTAGALFRMRNESTQLIHQYFNKNGFINVHTPIITASD 174

Query: 53  -PGNETHIRAFSTELIIQD----HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
             G     +  ST     +       +P YL  S +   +   ++   +++ F   +R  
Sbjct: 175 CEGGGEQFQVVSTLDNKSNKQPHFFGEPAYLTVSGQLEAEIFASSHS-RVYTFGPTFRAE 233

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +     H  EF M+E   A       +    + ++                +   F++  
Sbjct: 234 KSNTPRHLSEFWMIEPEIAFIDLNDNLDIAEDFLKYVINNL----LINCKDDIEFFNKRI 289

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
              + E   +       T  +   + +        +++     +     D   R   + I
Sbjct: 290 DTGLIERLKK-------TVDNKFIRLEYKDAINLLKESKEITQNSIEMGDDLQREHEKYI 342

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             + G      +  +P                     + +    L     EL+    +  
Sbjct: 343 TQHFGNVPV-FIINWPKSIKPFYMRQDD-----SNPNVVSNMDLLVPEVGELIGGSIREE 396

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R++  ++  + +  +     E +L           G  +GF+R +  VTG  NI +VI  
Sbjct: 397 RYDILLKNIQDLGMDQKTY-EWYLDLRKYGSVPHGGFGLGFERFLQYVTGLQNIRDVIPI 455

Query: 346 PF 347
           P 
Sbjct: 456 PR 457


>gi|50121465|ref|YP_050632.1| asparaginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|59798526|sp|Q6D453|SYN_ERWCT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49611991|emb|CAG75440.1| asparaginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 466

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 106/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A    ++ F   +R        H
Sbjct: 185 ENLPRTEQGKVDFSKDFFGKEAFLTVSGQLNGETYACA-LSNVYTFGPTFRAENSNTARH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  S + +     N+++   +       + +  +   F+E         
Sbjct: 244 LAEFWMIEPEVAFASLDDVAALAENLLKYVFQAV----LNERADDMAFFAERVDKEAVTR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ + D           D           G +  +   W    S      +       
Sbjct: 300 LEKFVSSDFAQV-------DYTDAVEILLNCGQQFENPVYWGVDLSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R      
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLAALDS 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +++       D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLEEMGL--NKEDYWWYRDLRRYGTIPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|54295128|ref|YP_127543.1| asparaginyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81368151|sp|Q5WUG0|SYN_LEGPL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|53754960|emb|CAH16448.1| asparagine tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 467

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 111/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R+ +  ++  ++ E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 LNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMS-KVYTFGPTFRAENSNTSRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + E + K   N++R       + +   ++ + + F++       E 
Sbjct: 245 LAEFWMIEPEIAFANLEDICKLSQNMLRY----LCKTVLEERSDDMDFFNQFVAPGCIER 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               A+ +        +           + +  +     +W           +   L   
Sbjct: 301 MEHIADSEF-------EIMTYTDAIKALEASEQKFEFPVSWGLDLQSEHERYLAEVLCKK 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP            D +             L     E++   ++  R E   +
Sbjct: 354 PV-IVTNYPQEIKGFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEILDR 406

Query: 294 EKKK--IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +  +  E Y    D           +G  +GF+RL+  VTG +N+ +VI  P +
Sbjct: 407 RMDECNLNKEHYQWYRDLRR--YGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRT 461


>gi|163786586|ref|ZP_02181034.1| asparagine--tRNA ligase [Flavobacteriales bacterium ALC-1]
 gi|159878446|gb|EDP72502.1| asparagine--tRNA ligase [Flavobacteriales bacterium ALC-1]
          Length = 477

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 122/376 (32%), Gaps = 42/376 (11%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +   + H R R       +  R+ +  ++ +YF EN F  I +  +  S    
Sbjct: 106 PKKHTFEFLRENAHLRTRTNTFSAVMRLRSSLSFAIHKYFNENGFYYIHTPIVTGSDAEG 165

Query: 56  E------THIRAFSTELIIQDHIR--KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAH 102
                  T + A +  L     +   +  +     L  S +   +   A    K++ F  
Sbjct: 166 AGEMFRVTGLDAKNPPLNDDGSVDYKQDFFGKETNLTVSGQLEAETY-AMSLGKVYTFGP 224

Query: 103 AWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
           A+R        H  EF M+E   A       M    + ++     A +            
Sbjct: 225 AFRAENSNTTRHLAEFWMVEPEVAFMDLAGNMDLAEDFMKSVLSYALENNKEDLEFLEKR 284

Query: 162 FSEPEYITVAEAFARYANIDLGTTL--------DNPDQPDRHLLYLQAQQAGIRVAHDDT 213
             + E        +  + I+    +           +  D        ++   +   ++ 
Sbjct: 285 LLDEEKKLPQAQRSDMSLIEKIKFVVDNNFKRVSYTEAIDILRNCKPNKKKKFKYIIEEW 344

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
            +D+ S      +E +    C  IL  YPA   A       D +  +  ++    I    
Sbjct: 345 GADLQSEHERFLVEKH--FKCPVILFDYPASIKAFYMRLNEDGKTVRAMDVLFPGI---- 398

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVML 332
              E+    ++  R +   ++ K +      +   +L          SG  +G +RL+M 
Sbjct: 399 --GEMAGGSQREERLDVLKEKMKALDIPEEEL-WWYLDLRKYGTAVHSGFGLGLERLIMF 455

Query: 333 VTGANNINEVIWTPFS 348
            TG +NI +VI  P +
Sbjct: 456 ATGISNIRDVIPYPRT 471


>gi|145506673|ref|XP_001439297.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406481|emb|CAK71900.1| unnamed protein product [Paramecium tetraurelia]
          Length = 470

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 84/227 (37%), Gaps = 17/227 (7%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR R              L R+ +   LREYF    FIE+++ 
Sbjct: 205 LHMLPTTHFGFKDHEQRYRMRYLDLIMNKKVRDIFLARSSVIKQLREYFDGKGFIEVETP 264

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           SL    G  T  + F T     + + + L+++ +PE   K L+  G ++++     +RN 
Sbjct: 265 SLNVIQGGAT-AKPFKT---FHNSLHRDLFMRVAPELYLKMLIVGGLDRVYEIGKNFRNE 320

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H PEFT +E+Y A+  Y  LM     ++               +   NP      
Sbjct: 321 GIDQTHNPEFTAMEFYWAYCDYNDLMTVTEEVLSQIVLKLKGSYKFKIHKGDNPTITLTE 380

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
             +     +    D       P  P   ++    ++   ++      
Sbjct: 381 HDIKSGHFKEKEEDFLELDFTPPWPRVSMMAELEKKLVKKLMPSLMH 427


>gi|331651951|ref|ZP_08352970.1| asparagine--tRNA ligase [Escherichia coli M718]
 gi|331050229|gb|EGI22287.1| asparagine--tRNA ligase [Escherichia coli M718]
          Length = 481

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 140 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 199

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 200 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 258

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   FSE         
Sbjct: 259 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFSERVDKDAVSR 314

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 315 LERFIEADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 367

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R  +  
Sbjct: 368 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMG 426

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 427 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 475


>gi|153000465|ref|YP_001366146.1| asparaginyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217973546|ref|YP_002358297.1| asparaginyl-tRNA synthetase [Shewanella baltica OS223]
 gi|166231674|sp|A6WMP4|SYN_SHEB8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|151365083|gb|ABS08083.1| asparaginyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217498681|gb|ACK46874.1| asparaginyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 466

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/356 (16%), Positives = 108/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRA---- 61
            H R R  +       RN +  ++  ++ E  FI + +  +  S      E    +    
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTLDM 184

Query: 62  ---FSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                TE    D+      K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTEAGKVDYDKDFFGKEAFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +   +      +++ A         + +  +   F++    TV + 
Sbjct: 244 LAEFWMVEPEVAFANLNDIAGLAEAMLKYAFNAV----LTERMDDLTFFAQHVDKTVIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + + D           D        Q  G       +W    S      +       
Sbjct: 300 LQSFVSSDFAQV-------DYTDAVEILQNCGRTFEFPVSWGIDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDM 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++       D  +   +        +G  +GF+RLV  VTG NNI +VI  P 
Sbjct: 406 RLAEMDL--NQEDYWWYRDMRRYGTVPHAGFGLGFERLVSYVTGVNNIRDVIPFPR 459


>gi|323358770|ref|YP_004225166.1| aspartyl/asparaginyl-tRNA synthetase [Microbacterium testaceum
           StLB037]
 gi|323275141|dbj|BAJ75286.1| aspartyl/asparaginyl-tRNA synthetase [Microbacterium testaceum
           StLB037]
          Length = 446

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/333 (18%), Positives = 108/333 (32%), Gaps = 34/333 (10%)

Query: 13  DFHYRRRP-FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH 71
           D   RR       +  ++ ++R Y+VE  +IEI S  L  SP +E++   F         
Sbjct: 133 DLRQRRNNLIFRVQTTLEHAMRTYWVERDYIEIHSPKLMASP-SESNAELFEVPYFE--- 188

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYE 130
             K  YL  SP+F  +    AG  KIF  A A+R        H  EFT ++   +     
Sbjct: 189 -DKTAYLAQSPQFFKQMAQVAGFGKIFEIAPAFRADPSFTSRHATEFTSIDAEISWIDSH 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           + +      +   A  A       +                        +++        
Sbjct: 248 EEVARMQEELLHTAFQAVADKHGAEIQELF------------------GVEVQVPTLPFP 289

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           +             G  +   D   D      I         +    +  Y     A  +
Sbjct: 290 RIPLAEAREIVAARGYEIPRTDGDLDPEGERQIAAHVAETYGHQFVFITDYHPEIRAFYH 349

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
           +   +   TK ++L    +E+            +     ++ +EK  +  E   +D  +L
Sbjct: 350 MRNEETGLTKSYDLLFNGVEITTGAQREH----RVEVLIEQAKEK-GLDPE--HLD-FYL 401

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
                  P   G  MG  R++ML+ G ++I EV
Sbjct: 402 DFFRFGAPPHGGFGMGLARVLMLLLGESSIREV 434


>gi|303325874|ref|ZP_07356317.1| asparagine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863790|gb|EFL86721.1| asparagine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 454

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 107/349 (30%), Gaps = 35/349 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+    ++ ++F   +F  + +  L  S       +   +T   
Sbjct: 121 AHLRARTNKYGAAFRIRSEAGRAVHDFFHGRRFAWVHTPVLTGSDCEGAGEMFRVTTLAP 180

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            + +     +     L  S +    + LA G  +++ F   +R        H  EF M+E
Sbjct: 181 GEKNTDGDFFNRPCNLTVSGQLEA-EALALGLGRVYTFGPTFRAENSNTPRHAAEFWMIE 239

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A      LM+   ++ R       + + +    +   F       + E         
Sbjct: 240 PEMAFADLSDLMELGESLTRH----VIEHVLAHCEADVKLFDNFVDKGLLERLQGMLRQP 295

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               + +G   A   T+           +          I+  Y
Sbjct: 296 FARVPY-------AEAIRILEDSGKEFAFPVTFGVDLQTEHERYLAEEH-FQRPVIVYDY 347

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKKKIYN 300
           P    A       D       ++    I       EL+   ++  R ++ E + ++   N
Sbjct: 348 PKEIKAFYMRANDDNETVAAMDMLVPRI------GELIGGSQREERLDRLEARIRELGQN 401

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          +G  +GF+RL+ML+TG  NI +VI  P +
Sbjct: 402 PEDY--WWYLDLRRFGSVPHAGFGLGFERLLMLLTGITNIRDVIPFPRT 448


>gi|302869065|ref|YP_003837702.1| tRNA synthetase class II (D K and N) [Micromonospora aurantiaca
           ATCC 27029]
 gi|302571924|gb|ADL48126.1| tRNA synthetase class II (D K and N) [Micromonospora aurantiaca
           ATCC 27029]
          Length = 428

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/339 (17%), Positives = 97/339 (28%), Gaps = 44/339 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H  R   L       S  R       F+E+ +  +  S   E+    F       D   
Sbjct: 124 RHPVRSAALRISAAAVSGFRATLDGRGFVEVHTPKVVAS-STESGANVF-----ALDWFG 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAH-ESYEQ 131
           +P YL  SP+F  K+L+    E+++     +R        H  ++T L+        +  
Sbjct: 178 RPAYLAQSPQFY-KQLMVGVFERVYEVGPVFRAEPHDTVRHLAQYTSLDVELGFVADHRD 236

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M      +        ++                 +TV E  A    +     L     
Sbjct: 237 VMAVLRETLAGMVATVGERAGGALATLG--------VTVPEVPAEIPAVHFTDALKIAGA 288

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
           P        A +  +           F                   +  YP  +     +
Sbjct: 289 PADEPDLAPAHERALGEWALREHGSDFL-----------------FVTGYPMAKRPFYTH 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             PA P ++  F+L    +EL      L        R    +           P    ++
Sbjct: 332 PDPARPAYSNGFDLLFRGVELVTGGQRLH-------RHADYLAALAARGEPVEPY-AGYV 383

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G A+G +R V  + GA N+ EV   P  
Sbjct: 384 DAFRHGMPPHGGFAIGLERFVARLAGAANVREVTAFPRD 422


>gi|156387606|ref|XP_001634294.1| predicted protein [Nematostella vectensis]
 gi|156221375|gb|EDO42231.1| predicted protein [Nematostella vectensis]
          Length = 506

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 111/351 (31%), Gaps = 43/351 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    RE+     F EI +  +  +  +E    
Sbjct: 180 NQDTRLDNRIIDLRTVPNQAIFSIEAGVCKLFREFLDSKGFHEIHTPKIISAA-SEGGAN 238

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F        + +   +L  SP+   +  L    +K++     +R  +     H  EF  
Sbjct: 239 VFEV-----SYFKGKAFLAQSPQLYKQMALTGDFDKVYTIGSVFRAEDSNTHRHLTEFIG 293

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   +   +   +   +  +        Q+ ++                          
Sbjct: 294 LDVEMSFYEHYHEVVRTIGDMFNYIFKGLQERYAEDIAKVQKQYPS-------------- 339

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            +    L+     +        ++AGI + +++  S    + L + ++     +   ILD
Sbjct: 340 -EPFKFLEPALILEYREGVDMLREAGIEMGYEEDLSTPNEKFLGKLVKQKYDTD-FFILD 397

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +YP           P +P  +  ++++    E+ +    + DP + + R          I
Sbjct: 398 KYPLCIRPFYTMPDPFNPNVSNSYDMFIRGEEVLSGAQRIHDPEKLKER-----ASHHGI 452

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ET    + ++       P  +G  +G  R+VML    +N+ +    P  
Sbjct: 453 DLETI---KSYIDSFRYGAPPHAGGGIGLARVVMLYLDLHNVRKSSMFPRD 500


>gi|146320461|ref|YP_001200172.1| asparaginyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751434|ref|YP_003024575.1| asparaginyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753335|ref|YP_003026476.1| asparaginyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|166232740|sp|A4W083|SYN_STRS2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|145691267|gb|ABP91772.1| Aspartyl/asparaginyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251815723|emb|CAZ51324.1| asparaginyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251819581|emb|CAR45260.1| asparaginyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319757852|gb|ADV69794.1| asparaginyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 448

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/348 (18%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++      RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  +  YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGQLAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +               +   +AE F R A  D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRY-IAEPFKRVAYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            T L    + D+   Y                 D F       I    G+   T +  YP
Sbjct: 295 ITLLQ-EHEADKDTDYE-----------HIEHGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDNYDALVAKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|332093529|gb|EGI98587.1| asparaginyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 463

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 122 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 182 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 241 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 297 LERFIEADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R  +  
Sbjct: 350 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMG 408

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 409 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 457


>gi|13541827|ref|NP_111515.1| asparaginyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|20139905|sp|Q979Y4|SYN_THEVO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|14325264|dbj|BAB60168.1| tRNA synthetase Asn [Thermoplasma volcanium GSS1]
          Length = 429

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 112/350 (32%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R   +     L  R+ I  S  ++F +  + ++ +  +  +   E     F 
Sbjct: 114 LDNRHLWLRSREFTS--ILKVRSTIFRSFADFFYDQGYYQVHTPFMVSTAV-EGGSTLFK 170

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +        +P++L  S +F  + ++ +  EK+F  A ++R  +     H  E+   E 
Sbjct: 171 VDF-----FGEPIFLNQSAQFYLETMIYS-LEKVFTIAPSFRAEKSRTRRHLTEYWHAEA 224

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A     ++M    N+I    +   ++ +    +          +       +Y++I  
Sbjct: 225 EVAWIDNREMMDVEENMIYYIIQRVIEENYDDLKLLGRDPEALRAMKPPFPRVKYSDI-- 282

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                             A + G+++ + D       R +  +            +  YP
Sbjct: 283 ---------------IKVANEIGMQLKYGDDLGADEERQITMRYCK------PVFVTNYP 321

Query: 243 APESALANIYPADP--RFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                       D          L      E+      + D  E   R       ++   
Sbjct: 322 KELKPFYMPQDPDNPSEVLNHDLLAPEGYGEIIGGSQRIWDYKELMQR------IREAGL 375

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +E+      ++          SG  +G DRL M +   +NI E I  P +
Sbjct: 376 DESAYY--WYIDLRKYGSVPHSGFGLGMDRLAMWIMHLDNIREAIPYPRT 423


>gi|67467598|ref|XP_649894.1| aspartyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56466418|gb|EAL44507.1| aspartyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 544

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 104/350 (29%), Gaps = 46/350 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRA 61
           D     R               ++      RE+    +F+EI +  L   S    ++I  
Sbjct: 221 DTRLDNRMLDLRTVTNIAIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSSEGGSNI-- 278

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
           F  +     +  +  YL  SP+   +  +     K+F     +R        H  EF  L
Sbjct: 279 FEVK-----YFDRKAYLAQSPQLYKQMAIMGDFRKVFEVGPVFRAENSNTRRHLTEFEGL 333

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +             D M  +         K F  +          E +            
Sbjct: 334 DIEMEIVENYHECIDVMEKLFTFIFDEIPKRFPDELKVIRKQYPFEDL------------ 381

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                     +          + +G  +   D ++      L E I+     +   ILD+
Sbjct: 382 ----IYRPFLRLTYKEAIEMLRASGETIGDYDDFTTPQEVKLGELIKAKYNTD-FYILDK 436

Query: 241 YPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           +PA            DP ++  ++++    E+ +    + DP     R  +      K  
Sbjct: 437 FPAAIRPFYTMPDIDDPNYSNSYDVFVRGQEITSGAQRIHDPEFLMKRCIE------KGV 490

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +      +D++          +G  +G +R+ ML  G  NI +V   P  
Sbjct: 491 DPATL--KDYIESFRFGSWPHAGCGIGLERITMLYLGIPNIRKVTLFPRD 538


>gi|327440744|dbj|BAK17109.1| aspartyl/asparaginyl-tRNA synthetase [Solibacillus silvestris
           StLB046]
          Length = 431

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/351 (17%), Positives = 114/351 (32%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    ++   +  RN I  +  E+F EN F ++D   L   SP   + +  F
Sbjct: 115 MDNRHLWLRSR--KQHAIMKVRNEIIRATYEFFNENGFTKMDPPILTGSSPEGTSEL--F 170

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 171 HTK-----YFDEDAFLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +++ ++     +    +   +                      +        D
Sbjct: 225 PEMAFVEHDESLEVQEQYVSHIVQSVLKNC--------------------KLDLERLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILDR 240
               L+N   P   + Y QA +       DD  W D F       I  +   +    +  
Sbjct: 265 TSK-LENVKAPFPRISYDQAIEFLHEQGFDDIQWGDDFGAPHETAIANHY--DKPVFITC 321

Query: 241 YPAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           YP          +P         +L A     E+    + + D    + R E+       
Sbjct: 322 YPIGIKPFYMQPHPERDDVVLCADLIAPEGYGEIIGGSERIYDYELMKSRLEEHNL---S 378

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +    + +D             SG  +G +R V  ++G  +I E I  P  
Sbjct: 379 MDAYAWYLD--LCK--QGAVPHSGFGLGLERTVAWISGTEHIRESIPFPRL 425


>gi|52629606|gb|AAU28347.1| asparaginyl tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 478

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R+ +  ++  ++ E  F  + +  +  S       +   ST   
Sbjct: 137 AHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRVSTLDL 196

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 197 LNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMS-KVYTFGPTFRAENSNTSRH 255

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + E + K   N++R       + +   +  + + F++       E 
Sbjct: 256 LAEFWMIEPEIAFANLEDICKLSQNMLRY----LCKTVLEERADDMDFFNQFVAPGCIER 311

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               A+ +        +           + +  +     +W           +   L   
Sbjct: 312 MEHIADSEF-------EIMTYTDAIKALEASDQKFEFPVSWGLDLQSEHERYLAEVLCKK 364

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP            D +             L     E++   ++  R E   +
Sbjct: 365 PV-IVTNYPQEIKGFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEILDR 417

Query: 294 EKKK--IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +  +  E Y    D           +G  +GF+RL+  VTG +N+ +VI  P +
Sbjct: 418 RMDECNLNKEHYQWYRDLRR--YGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRT 472


>gi|161723246|ref|YP_096294.2| asparaginyl-tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 467

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R+ +  ++  ++ E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 LNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMS-KVYTFGPTFRAENSNTSRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + E + K   N++R       + +   +  + + F++       E 
Sbjct: 245 LAEFWMIEPEIAFANLEDICKLSQNMLRY----LCKTVLEERADDMDFFNQFVAPGCIER 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               A+ +        +           + +  +     +W           +   L   
Sbjct: 301 MEHIADSEF-------EIMTYTDAIKALEASDQKFEFPVSWGLDLQSEHERYLAEVLCKK 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP            D +             L     E++   ++  R E   +
Sbjct: 354 PV-IVTNYPQEIKGFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEILDR 406

Query: 294 EKKK--IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +  +  E Y    D           +G  +GF+RL+  VTG +N+ +VI  P +
Sbjct: 407 RMDECNLNKEHYQWYRDLRR--YGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRT 461


>gi|254884797|ref|ZP_05257507.1| asparaginyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|319644141|ref|ZP_07998666.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254837590|gb|EET17899.1| asparaginyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317384263|gb|EFV65234.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 467

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 110/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T+  
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPIITASDCEGAGQMFQVTTKNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M    + I+   + A    +       + F +         
Sbjct: 242 LAEFWMIEPEVAFNDITDNMDLAEDFIKYCVQWALDNCYDDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +     +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLQGVLKEEFVRLPYTEGIKIL-EEAVVKGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLMTRIQE- 410

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +      +   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 411 ------LGIPMKDM-WWYLDTRKFGSCPHSGFGLGFERLLLFVTGMTNIRDVIPFPRT 461


>gi|145523029|ref|XP_001447353.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414864|emb|CAK79956.1| unnamed protein product [Paramecium tetraurelia]
          Length = 564

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 107/334 (32%), Gaps = 33/334 (9%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           ++     ++ I    RE+ VEN FIEI +  L    G         T +    +  +   
Sbjct: 255 KQAIFRVQSGIGLLFREFLVENGFIEIHTPKL--IGGTSEGG----TNVFKLKYFNQDAC 308

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  L A  +++F  A  +R        HQ EF  ++     + +   + D 
Sbjct: 309 LAQSPQLYKQMCLMADYDRVFEVAPVFRAENSNTHRHQCEFISMDIEMVIKEHFTELLDL 368

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           M  +        +K +  +    +     E   + E   +                    
Sbjct: 369 MGDLCIYMFKGIEKRYQKEIEIISQQFPFEPFKIPEPVLKLT---------------FEE 413

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                 +AG+     D    +  + L + +    G +   IL RYP             D
Sbjct: 414 GVKMLHEAGVNQDPHDDLDTVNEKTLGKLVREKYGTD-FYILHRYPKKARPFYTMPCHDD 472

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P +T  ++ +    E+ +    + DP        K+++EK           +D++     
Sbjct: 473 PNYTLSYDFFMRGEEIVSGAQRVHDP----ELLIKQIKEK----GIAVEPLKDYIDSFRY 524

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 G A G +R+  L     NI      P  
Sbjct: 525 GAYPHGGCAFGLERVAFLYFNLKNIRNACMFPRD 558


>gi|237807864|ref|YP_002892304.1| asparaginyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237500125|gb|ACQ92718.1| asparaginyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 466

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/372 (15%), Positives = 110/372 (29%), Gaps = 48/372 (12%)

Query: 3   QIPSQP---WWNRDFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-- 52
             P +    +     H R R  +       RN I  ++  +F +  F+ I +  +  S  
Sbjct: 111 MAPKRHSVEYLREHAHLRVRTNMMGAVTRVRNCIAQAIHRFFHDEGFMWIATPLITASDC 170

Query: 53  -PGNETHIRA-------FSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
               E    +         T+    D+      K  +L  S + + +    A   K++ F
Sbjct: 171 EGAGEMFRVSTLDMENLPRTDKGSIDYNQDFFGKEAFLTVSGQLNLETYACAMS-KVYTF 229

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A             +++           + +  + 
Sbjct: 230 GPTFRAENSNTSRHLAEFWMVEPEIAFADLNDNAAMAEKLLKYVFSAV----LNERRDDM 285

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
             F+E           ++ + D           D        + +G        W    S
Sbjct: 286 EFFAERVDKDAITRLEQFVSADFAQV-------DYTDAIEILKNSGRTFEFPVEWGIDMS 338

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +          +   YP    A       D +             L     E++
Sbjct: 339 SEHERYLAEEHFKAPVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 391

Query: 280 DPIEQRHRFE-KEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGA 336
              ++  R +  + +  +   N+    D  +   L        SG  +GF+RLV+ VTG 
Sbjct: 392 GGSQREERLDVLDARLAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLVVYVTGM 448

Query: 337 NNINEVIWTPFS 348
            N+ +VI  P +
Sbjct: 449 GNVRDVIPFPRT 460


>gi|32033728|ref|ZP_00134023.1| COG0017: Aspartyl/asparaginyl-tRNA synthetases [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208155|ref|YP_001053380.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|190149984|ref|YP_001968509.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307263312|ref|ZP_07544930.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|166231655|sp|A3N039|SYN_ACTP2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|259511564|sp|B3H198|SYN_ACTP7 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|126096947|gb|ABN73775.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|189915115|gb|ACE61367.1| asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306871374|gb|EFN03100.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 467

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 107/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRTEEGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++   +   ++             + + IT  E 
Sbjct: 245 LAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHIDK-DVITRLEN 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F                Q D         ++G       +W    S      +      +
Sbjct: 304 F----------IAAPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDT 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++     P D  +   L        SG  +GF+RL++ VTG  NI EVI  P 
Sbjct: 407 RMVEMGL--NPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPR 460


>gi|325192924|emb|CCA27311.1| aspartyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 529

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 100/334 (29%), Gaps = 34/334 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +  +  +  +    RE+  +  F+EI +  L     +E+    F        +  +   L
Sbjct: 220 QAIMRIQAGVCRLFREFLDDKGFVEIHTPKLIG-GASESGASVFK-----LKYFDQEACL 273

Query: 79  QTSPEFSCKK-LLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
             SP+   +      G E+++     +R        H  EF  L+     + +   +   
Sbjct: 274 AQSPQTYKQMACACGGLERVYEIGPVFRAENSNTHRHMCEFVGLDLEMVIQEHYHEVVQL 333

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
            + +           F+ +    N     E +   +                        
Sbjct: 334 FSDLFIYIFDNLTARFADELAAVNKQHPFEPLKYKKP---------------SLILSYEE 378

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                 +AG     +D  S    + L   ++     +   IL++YP             D
Sbjct: 379 GVKMLHEAGAEQNSEDDLSTENEKWLGRLVKEKYDTD-FYILNKYPLAVRPFYTMPDSED 437

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            R++  +++     E+ +    + D      R +     K+ +        + ++     
Sbjct: 438 TRWSNSYDIMIRGEEIVSGAQRVHDAKLLEDRLDALNVPKESL--------KTYIDAFRL 489

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 G  +G +R+VML  G  NI +    P  
Sbjct: 490 GALPHGGGGIGLERVVMLYLGLGNIRKASMFPRD 523


>gi|260909949|ref|ZP_05916636.1| asparagine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635899|gb|EEX53902.1| asparagine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 467

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/361 (15%), Positives = 114/361 (31%), Gaps = 42/361 (11%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
            +  H R R       +  R+ +  ++ +YF ++ F    +  +  S       +  F  
Sbjct: 120 RQHAHLRLRTNTFGAVMRIRHNMAIAIHQYFHDHGFYYFHTPIITASDAEGAGEM--FQV 177

Query: 65  ELIIQDHIRKP----------LY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
                + ++K            +     L  S +   +    A   +I+ F   +R    
Sbjct: 178 TTKNLNDLKKDESGKVNYNDDFFGKMTSLTVSGQLEGELGATA-LGQIYTFGPTFRAENS 236

Query: 110 -GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A    + LM    + I+     A          +    ++    
Sbjct: 237 NTPRHLAEFWMIEPEVAFIDLDDLMDLEEDFIKYCVRWA----LDNCKDDLAFLNKMIDN 292

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T+ E                 D  +   +   A +AG +     +W    +      +  
Sbjct: 293 TLLERLQGVV----SENFVRLDYTEGINILEDAVKAGKKFEFPVSWGMDLASEHERFLVE 348

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                   I+  YP    A       D R  +  ++    I       E++    +   +
Sbjct: 349 EHFKKPV-IMTHYPKGIKAFYMKLDEDGRTVQGTDVLFPQI------GEIIGGSVREENY 401

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +K + + ++ +     +   +L           G  +GF+RL++ VTG  NI +VI  P 
Sbjct: 402 DKLVAQIEERHIPMKDM-WWYLDTRRFGTCPHGGFGLGFERLILFVTGMQNIRDVIPFPR 460

Query: 348 S 348
           +
Sbjct: 461 T 461


>gi|307299320|ref|ZP_07579121.1| asparaginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915116|gb|EFN45502.1| asparaginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 432

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 114/345 (33%), Gaps = 40/345 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    R+   L  R+ I  ++RE++ +  F+ +D+     S   E+    F 
Sbjct: 116 MDNRHLWLRT--QRQTHVLKIRHEIIRAVREFYNDRGFVLVDTPIFTGSI-GESAGNTFE 172

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +           YL  + +    +  A    K++     +R  +     H  EF M E 
Sbjct: 173 IDYFDYG----KAYLAQTGQLYL-EAAAMALGKVYNLGPTFRAEKSKTRRHLIEFWMNEA 227

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A+  ++  +K   +++    +   ++   +        S  E I              
Sbjct: 228 EVAYYGHDDNIKLQEDLVTYVVKKTLERAGEYLRSVGRDTSRLEKI-------------- 273

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                  + P   + Y +A +  ++   D  W D         I          +++RYP
Sbjct: 274 -------ETPFPRITYDEAIKLLVKKGFDIKWGDDIGGDEETAIA--NEFEKPVVVERYP 324

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
               +      P  P      +     +       E++   E+ H  +  ++  ++   +
Sbjct: 325 RMMKAFYMQPDPERPEVVLCDD-----MLAPEGYGEIIGASERIHDRDLLVERIQEYGLD 379

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               D  +L          SG  MG +R+V  + G  +I E I  
Sbjct: 380 VESYDW-YLDLRDYGTVPHSGFGMGIERIVAWIAGLEHIREAIPF 423


>gi|126174140|ref|YP_001050289.1| asparaginyl-tRNA synthetase [Shewanella baltica OS155]
 gi|304411318|ref|ZP_07392932.1| asparaginyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307305360|ref|ZP_07585108.1| asparaginyl-tRNA synthetase [Shewanella baltica BA175]
 gi|166231673|sp|A3D3V7|SYN_SHEB5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|125997345|gb|ABN61420.1| asparaginyl-tRNA synthetase [Shewanella baltica OS155]
 gi|304350173|gb|EFM14577.1| asparaginyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306911663|gb|EFN42088.1| asparaginyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 466

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 108/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRA---- 61
            H R R  +       RN +  ++  ++ E  FI + +  +  S      E    +    
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTLDM 184

Query: 62  ---FSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T+    D+      K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDAGKVDYDKDFFGKEAFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +   +      +++ A         + +  +   F++    TV + 
Sbjct: 244 LAEFWMVEPEVAFANLNDIAGLAEAMLKYAFNAV----LTERMDDLTFFAQHVDKTVIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + + D           D        Q  G       +W    S      +       
Sbjct: 300 LQSFVSSDFAQV-------DYTDAVEILQNCGRTFEFPVSWGIDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDM 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++       D  +   +        +G  +GF+RLV  VTG NNI +VI  P 
Sbjct: 406 RLAEMDL--NQEDYWWYRDMRRYGTVPHAGFGLGFERLVSYVTGVNNIRDVIPFPR 459


>gi|160875062|ref|YP_001554378.1| asparaginyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189083414|sp|A9KZ30|SYN_SHEB9 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|160860584|gb|ABX49118.1| asparaginyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315267294|gb|ADT94147.1| asparaginyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 466

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 108/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRA---- 61
            H R R  +       RN +  ++  ++ E  FI + +  +  S      E    +    
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFRVSTLDM 184

Query: 62  ---FSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T+    D+      K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDAGKVDYDKDFFGKEAFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +   +      +++ A         + +  +   F++    TV + 
Sbjct: 244 LAEFWMVEPEVAFANLNDIAGLAEAMLKYAFNAV----LTERMDDLTFFAQHVDKTVIDR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + + D           D        Q  G       +W    S      +       
Sbjct: 300 LQSFVSSDFAQV-------DYTDAVEILQNCGRTFEFPVSWGIDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDM 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++       D  +   +        +G  +GF+RLV  VTG NNI +VI  P 
Sbjct: 406 RLAEMDL--NQEDYWWYRDMRRYGTVPHAGFGLGFERLVSYVTGVNNIRDVIPFPR 459


>gi|150004187|ref|YP_001298931.1| asparaginyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|294775217|ref|ZP_06740741.1| asparagine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|166231658|sp|A6L0U5|SYN_BACV8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|149932611|gb|ABR39309.1| asparaginyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|294450922|gb|EFG19398.1| asparagine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 467

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 110/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T+  
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPIITASDCEGAGQMFQVTTKNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGAIIYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M    + I+   + A    +       + F +         
Sbjct: 242 LAEFWMIEPEVAFNDITDNMDLAEDFIKYCVQWALDNCYDDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +     +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLQGVLKEEFVRLPYTEGIKIL-EEAVVKGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLMTRIQE- 410

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +      +   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 411 ------LGIPMKDM-WWYLDTRKFGSCPHSGFGLGFERLLLFVTGMTNIRDVIPFPRT 461


>gi|237707081|ref|ZP_04537562.1| AsnS [Escherichia sp. 3_2_53FAA]
 gi|331641457|ref|ZP_08342592.1| asparagine--tRNA ligase [Escherichia coli H736]
 gi|331672464|ref|ZP_08373254.1| asparagine--tRNA ligase [Escherichia coli TA280]
 gi|331676719|ref|ZP_08377415.1| asparagine--tRNA ligase [Escherichia coli H591]
 gi|332279891|ref|ZP_08392304.1| asparaginyl-tRNA synthetase [Shigella sp. D9]
 gi|115512272|gb|ABJ00347.1| AsnS [Escherichia coli APEC O1]
 gi|226898291|gb|EEH84550.1| AsnS [Escherichia sp. 3_2_53FAA]
 gi|331038255|gb|EGI10475.1| asparagine--tRNA ligase [Escherichia coli H736]
 gi|331070370|gb|EGI41735.1| asparagine--tRNA ligase [Escherichia coli TA280]
 gi|331075408|gb|EGI46706.1| asparagine--tRNA ligase [Escherichia coli H591]
 gi|332102243|gb|EGJ05589.1| asparaginyl-tRNA synthetase [Shigella sp. D9]
          Length = 481

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 140 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 199

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 200 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 258

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 259 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 314

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 315 LERFIEADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 367

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R  +  
Sbjct: 368 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMG 426

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 427 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 475


>gi|307245528|ref|ZP_07527615.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307254484|ref|ZP_07536320.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258942|ref|ZP_07540673.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306853587|gb|EFM85805.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306862534|gb|EFM94492.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866966|gb|EFM98823.1| Asparaginyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 467

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 107/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRTEEGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++   +   ++             + + IT  E 
Sbjct: 245 LAEFWMVEPEFAFATLADNAKLAEDMLKYVFKAVLEERKDDMQFFAKHIDK-DVITRLEN 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F                Q D         ++G       +W    S      +      +
Sbjct: 304 F----------IAAPFAQVDYTDAIEILLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDT 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++     P D  +   L        SG  +GF+RL++ VTG  NI EVI  P 
Sbjct: 407 RMVEMGL--NPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQNIREVIPFPR 460


>gi|15896505|ref|NP_349854.1| asparaginyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|20139906|sp|Q97E56|SYN_CLOAB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|15026334|gb|AAK81194.1|AE007821_11 Aspartyl/asparaginyl-tRNA synthetase [Clostridium acetobutylicum
           ATCC 824]
 gi|325510663|gb|ADZ22299.1| asparaginyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 463

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 104/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+ +++  +  S       +   +T   
Sbjct: 122 AHLRPRSNTFSAVFRVRSLAAYAVHKFFQERDFVYVNTPLITASDAEGAGEMFQVTTLDL 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + S +    A    ++ F   +R  E     H
Sbjct: 182 KNPPKNEEGNIDFSKDFFGKKANLTVSGQLSAETFALA-FRNVYTFGPTFRAEESNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +     +++                    F+      + + 
Sbjct: 241 AAEFWMIEPEMAFAELSDYLDTAEEMVKYIINFV----MENAPEEMEFFNTRIDKGLFDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N + G                  +++G +  +   W           +   +   
Sbjct: 297 LHNVVNSEFGRITYTE-------AVDILEKSGEKFEYPVKWGIDLQTEHERYLTDKVFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +     +L    + E+               R E+  
Sbjct: 350 PL-FVTDYPKDIKAFYMRINDDNKTVAAADLLVPGVGEIIGGSQREERLAVLEKRMEELN 408

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+            +L        + SG  +GF+R++M +TG +NI +VI  P +
Sbjct: 409 LNKEDY--------WWYLELRKYGETKHSGYGLGFERMIMYLTGISNIRDVIPFPRT 457


>gi|29349281|ref|NP_812784.1| asparaginyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253570373|ref|ZP_04847782.1| asparaginyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298384819|ref|ZP_06994378.1| asparagine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|38258349|sp|Q8A0Z8|SYN_BACTN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|29341189|gb|AAO78978.1| asparaginyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251840754|gb|EES68836.1| asparaginyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298261963|gb|EFI04828.1| asparagine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 467

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 104/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE--------THI 59
            H R R          R+ +  ++ ++F E  F    +  +  S              ++
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITGSDCEGAGQMFQVTTMNL 182

Query: 60  RAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                +           +     L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDERGSISYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A            + F +     + E 
Sbjct: 242 LAEFWMIEPEVAFNDIADNMDLAEEFIKYCVKWALDNCADDVKFLNDMFDK----GLIER 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
                  D           D   +   A   G +      W  D+ S      +E +   
Sbjct: 298 LQGVLKDDFVRLPY----TDGIKILEDAVAKGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYNKLMTRIEEM 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG +NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRT 461


>gi|125624792|ref|YP_001033275.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166980088|sp|A2RMQ1|SYN_LACLM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|124493600|emb|CAL98585.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071592|gb|ADJ60992.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 447

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 120/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    R+   +  RN I  +  ++F +N FI+ DS  L    GN       +
Sbjct: 124 LDNRHLWLRSK--RQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILS---GNAAEN---T 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGNPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIR--------CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
                ++++ +      ++         AA            +     +  + ++  +A 
Sbjct: 235 EYPFVTHDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDDA- 293

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D                      D F       I    G+  
Sbjct: 294 -----IDLLQAHENDEDTDYE---------------HVEHGDDFGSPHETWISNYYGV-- 331

Query: 235 CTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA  ++      P +P      +L            E++   E+   ++  ++
Sbjct: 332 PTFIVNYPASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSERETDYDLLLK 386

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +      +    D  +L          +G  +G +R+V  V G  +I E I  P  
Sbjct: 387 KIADFGLDPKDYDW-YLELRKFGSVPHAGFGLGLERMVTFVAGTEHIREAIPFPRM 441


>gi|260171987|ref|ZP_05758399.1| asparaginyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315920299|ref|ZP_07916539.1| asparaginyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313694174|gb|EFS31009.1| asparaginyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 467

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 105/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDERGSISYEDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A            + F +     + E 
Sbjct: 242 LAEFWMIEPEVAFNDITDNMDLAEEFIKYCVKWALDNCADDVKFLNDMFDK----GLIER 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
                  D           D   +  +A   G +      W  D+ S      +E +   
Sbjct: 298 LQGVLKDDFVCLPY----TDGIKILEEAVAKGHKFEFPVYWGVDLASEHERFLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYNKLMTRIEEM 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 461


>gi|82751053|ref|YP_416794.1| asparaginyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123754652|sp|Q2YY52|SYN_STAAB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|82656584|emb|CAI81007.1| asparaginyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 430

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F ++ F ++D   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 170 LTK-----YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +    D
Sbjct: 224 GEMAFTNHAESLEIQEQYVTHVVKSVLENC--------------------KLELKILERD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 264 TSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P +       +L A          E++   E+    E  ++  ++  +
Sbjct: 322 PTKIKPFYMQPNPENEETVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D            G  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEEAYSYYLDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 424


>gi|298709437|emb|CBJ31343.1| Aspartyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 614

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/348 (14%), Positives = 102/348 (29%), Gaps = 38/348 (10%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
              W        +     ++ +    R       F+EI S  L  +  +E     F+T  
Sbjct: 293 DYRWIDLRTPANQAIFKIQSAVCQYFRANLASKGFVEIHSPKL-LAGASEGGSEVFTT-- 349

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
              ++      L  SP+   +      G  ++      +R  +     H  EFT L++  
Sbjct: 350 ---NYFGTEACLAQSPQLYKQMAAACGGFGRVMEVGPVFRAEKSRTHRHLCEFTGLDFEM 406

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
             + +   + +  + +         +    +          E +  A    R        
Sbjct: 407 VIKEHYFEVLEVFSDLFINIFDEVNRNCKEELEAVRTQHPFEDLRYARPTLRLT------ 460

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                              AG         S    + L + +    G +   ++D+YP  
Sbjct: 461 ---------FQEGIQLLIDAGYDADPLGDLSTEHEKKLGDLVAEKYGTD-FFMMDKYPLD 510

Query: 245 ESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                    P++P+ +  F+++    E+ +    + D    + R  +             
Sbjct: 511 VRPFYTMPCPSNPKHSNSFDIFIRGEEIVSGAQRIHDLEFLKERAREH----------DI 560

Query: 304 PIDE--DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           P+D    +L           G  +G +R+VML  G  NI +    P  
Sbjct: 561 PLDSIMSYLDAFKHGAEPHGGGGIGLERVVMLFLGLKNIRKTSMFPRD 608


>gi|258511605|ref|YP_003185039.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478331|gb|ACV58650.1| asparaginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 431

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 113/349 (32%), Gaps = 43/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W      R+R  L  R  I+ +++ +   N F  +D+  L  +   +T      
Sbjct: 116 LDHRHLWI--RVPRQRAILRIRAEIECAIQAFLDNNGFTRVDAPILTPASCEDT------ 167

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL    +     YL  S +   +    A   K++CF   +R  +     H  EF M+E 
Sbjct: 168 TELFETRYFDDTAYLTQSGQLYMEAAAMA-LGKVYCFGPCFRAEKSKTRRHLIEFWMVEP 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E+ ++    ++    +                      I            D+
Sbjct: 227 EMAFVEHEENLRVQEALVEHVVQSV--------------------IDRCAPELELLGRDI 266

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L+    P   + Y  A +       D  W D F       +      +    ++RYP
Sbjct: 267 AR-LERVRAPFARMSYDDAIRWLRDHGFDIAWGDDFGSPHETALAEQ--FDTPVFIERYP 323

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
               +      P  P      ++ A     E+      + D    + RFE+      ++ 
Sbjct: 324 TKLKAFYMQPDPDRPEVVLCADMLAPEGYGEIIGGSQRIHDYELLKARFEE-----HRLP 378

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ETY    D           SG  +G +R +  + G +++ E I  P  
Sbjct: 379 EETYGWYLDLRR--YGSVPHSGFGLGLERTIAWICGLDHVREAILFPRM 425


>gi|283833779|ref|ZP_06353520.1| asparagine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291070442|gb|EFE08551.1| asparagine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 466

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 111/358 (31%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHMRPRTNMIGAVARVRHTLAQALHRFFHEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKEAFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  + + +      +++ A +    +    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLDDVAGLAEAMLKYAFKAVLAE----RADDMKFFAERVDKDAISR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+ + D           D        ++ G +  +   W    S      +       
Sbjct: 300 LERFIDADFAQV-------DYTDAVSILEKCGKQFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMLEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|289580752|ref|YP_003479218.1| aspartyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530305|gb|ADD04656.1| aspartyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 434

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 111/369 (30%), Gaps = 64/369 (17%)

Query: 4   IPSQPWW----NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P  P      +       R               R  I  ++RE F E    EI++  +
Sbjct: 102 LPLDPSGKVDADLSTRLDNRTLDLRKDEVQAVFEIRAEILRAVREQFREFYCTEINTPKI 161

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             + G E       TEL    +  +  ++  SP+   + +  +  E++F     +R  E 
Sbjct: 162 VAT-GTEGG-----TELFPITYFGEEAFMNQSPQLFKQLIAGSNVERVFEIGPIFRAEEH 215

Query: 110 -GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS----- 163
               H  E T +++  A       M     I++ A E   +                   
Sbjct: 216 NTPRHLNEATSIDFEGAFCDQNDAMDVAEGIVKAAYEAVTENCSEELEALGLEEEFEVPE 275

Query: 164 -EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
            +   ++  EA  R   I+    LD        L     +  G  V              
Sbjct: 276 GDFPRLSYEEAIER---INATGELDEQLVWGDDLPTEGEKALGDDVG------------- 319

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDP 281
                          +  +P+         +  D + +  F+L    +EL +        
Sbjct: 320 -----------GHYFITDWPSEIKPFYIKDHDDDEQLSTGFDLMHPRMELVSGGQREHRH 368

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
                 FE++        +      E +       MP  +G  +G +RL+M + G +NI 
Sbjct: 369 EHLIEGFEQQ------GLDPDQF--EYYTKMFKYGMPPHAGFGLGGERLIMTILGLDNIR 420

Query: 341 EVIWTPFSQ 349
           E +  P  +
Sbjct: 421 EAVLFPRDR 429


>gi|327312549|ref|YP_004327986.1| asparagine--tRNA ligase [Prevotella denticola F0289]
 gi|326944758|gb|AEA20643.1| asparagine--tRNA ligase [Prevotella denticola F0289]
          Length = 463

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 101/351 (28%), Gaps = 35/351 (9%)

Query: 13  DFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETH---------- 58
               R   F      R+ +  ++  YF E+ F    +  +  S      +          
Sbjct: 121 HMRLRTNTFGAVFRIRHNMAIAIHRYFHEHGFYYFHTPLITGSDAEGAGNMFQVTTLDLD 180

Query: 59  --IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
              ++   +    D   K   L  S +   +    +    I+ F   +R        H  
Sbjct: 181 RIAKSGKVDYNA-DFFGKRTNLTVSGQLEGELGATS-LGAIYTFGPTFRAENSNTPRHLA 238

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A    ++LM    + I+     A                +       E  A
Sbjct: 239 EFWMVEPEVAFIDKDELMDLEEDFIKFCVRWALDNCKDDLEFLNKMIDK-------ELIA 291

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQ-AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
           R   +     +         +L    A              D+ S      +E +     
Sbjct: 292 RLEGVLKEDFVRLTYTEGIEILRKAVADGVKFEFPITGWGMDLSSEHERYLVEEH--FRR 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YP+   +       D +  +  ++    I       E++    +   ++K + E
Sbjct: 350 PVIMTDYPSEIKSFYMKKNPDGKTMQGTDVLFPRI------GEIIGGSVREENYDKLLAE 403

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 +    D              G  +GF+RL++ VTG  NI +VI  
Sbjct: 404 IDSRGMKREVYDWYLDTRKYGTCPHGGFGLGFERLILFVTGMQNIRDVIPF 454


>gi|219109777|ref|XP_002176642.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411177|gb|EEC51105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 501

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 55/392 (14%), Positives = 108/392 (27%), Gaps = 65/392 (16%)

Query: 1   MHQIPSQPWWNRDF----HYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMS--- 48
           ++ +P +           H R R       +  R+ +  +   +F  + F+ I +     
Sbjct: 123 LYPMPKKDLTLEHMREQAHLRPRGAIHAAAMRIRHCMAYATHNFFHNHGFLYIHTPIVTG 182

Query: 49  -----------LQYSPGNETHIRAFSTELIIQ---------------DHIRKPLYLQTSP 82
                      +    G++ H +  +  +                  D   + + L  S 
Sbjct: 183 ADCEGAGEQFGITTLLGSDHHQKDIALPVDPNKPIEETVIGAVDYSTDFFGQRVNLTVSG 242

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
           + + +    A    ++ F   +R        H  EF M+E   A       +    + ++
Sbjct: 243 QLNVETHACA-LSDVYTFGPTFRAENSFTSRHLSEFWMIEPEIAFADLTDDINLAEDYLK 301

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
              E A +        +   F E           R  N+               +L   A
Sbjct: 302 YCVEYALE-----NCADDLEFFENNPYGEMGLRDRLRNVIANPFKRLTYTEAIEILQN-A 355

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
              G +      W           I          +L  YP    A       D +    
Sbjct: 356 VAEGHKFEETPVWGMDLPSEHERFICEK-VFQQPVVLTDYPKDIKAFYMKLNDDGKTVAA 414

Query: 262 FELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFLA-CLTE 315
            ++    I E+             + R  +              +D      +L      
Sbjct: 415 ADVLVPKIGEIIGGSQREHRMDVLKQRCLE------------MNLDPRSVWWYLDLRRYG 462

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               +G  +GF+RL++ +TG +NI +VI  P 
Sbjct: 463 TVPHAGFGLGFERLILFITGLSNIRDVIPFPR 494


>gi|237719082|ref|ZP_04549563.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229451461|gb|EEO57252.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 467

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 105/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDERGSISYEDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A            + F +     + E 
Sbjct: 242 LAEFWMIEPEVAFNDITDNMDLAEEFIKYCVKWALDNCADDVKFLNDMFDK----GLIER 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
                  D           D   +  +A   G +      W  D+ S      +E +   
Sbjct: 298 LQGVLKDDFVRLPY----TDGIKILEEAVAKGHKFEFPVYWGVDLASEHERFLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYNKLMTRIEEM 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 461


>gi|189203561|ref|XP_001938116.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187985215|gb|EDU50703.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1041

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 107/331 (32%), Gaps = 27/331 (8%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               ++ I    R       FIEI +  LQ     E+    F       D+  +  +L  
Sbjct: 374 IFRIQSGICRLFRNQLDSEGFIEIHTPKLQG-GATESGASVFKI-----DYFGRGAFLAQ 427

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+ + +  ++A   K++     +R        H  E+T L+     + +   +   ++ 
Sbjct: 428 SPQLAKQMAISADFGKVYEIGAVFRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDR 487

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
              A      + +  +          E +   +        D    L+     D      
Sbjct: 488 TFKAIFKGIYEQYRPEIEVIKKHFPHEDLVWLDETPIIPFADAVRMLNESGWRDDD---- 543

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD-PRF 258
                G  +  ++         L   I+  LG +   ILD++PA       +   + P  
Sbjct: 544 -----GNELDVNEDLGTRDEVQLGRVIKQKLGTD-YYILDKFPANARPFYAMNDPNNPNV 597

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           T  F+++    E+ +    + D      +       K K+   +    E+++       P
Sbjct: 598 TNSFDIFCRGQEILSGGQRIHDADMLLEKM-----RKLKVDPSSM---EEYIQGFQWGAP 649

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              G  +G +R++ML+    NI      P  
Sbjct: 650 PHGGGGIGLERILMLMMSLGNIRHASMFPRD 680


>gi|330830401|ref|YP_004393353.1| asparaginyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328805537|gb|AEB50736.1| Asparaginyl-tRNA synthetase, putative [Aeromonas veronii B565]
          Length = 466

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 110/361 (30%), Gaps = 49/361 (13%)

Query: 13  DFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R  +       R+ +  ++  +F E  F+ + +  +  S       +  F    
Sbjct: 124 QAHLRPRTNIVGAVTRVRHCLAQAIHRFFHEEGFLWVATPLITASDTEGAGEM--FRVST 181

Query: 67  II---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
           +                +D   K  +L  S + + +    A   K++ F   +R      
Sbjct: 182 LDMENLPRTDAGKVDYNEDFFGKEAFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNT 240

Query: 112 -LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF M+E   A    E        +++           + +  +   F++      
Sbjct: 241 SRHLAEFWMVEPEVAFNDLEDNAALAEAMLKYVFNAV----LTERRDDLEFFAQHVDKDA 296

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                R+ + D         Q D        Q  G +     +W    S      +    
Sbjct: 297 IGRLERFVSSDFA-------QIDYTDAIEVLQNCGKKFEFPVSWGIDLSSEHERYLAEEH 349

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE- 289
             +   +   YP    A       D +             L     E++   ++  R + 
Sbjct: 350 FKSPVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDV 402

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            + +  +   N+    D  +   L        SG  +GF+RLV+ VTG  N+ +VI  P 
Sbjct: 403 LDARLAEMGLNKE---DYWWYRDLRRFGTVPHSGFGLGFERLVVYVTGMGNVRDVIPFPR 459

Query: 348 S 348
           +
Sbjct: 460 T 460


>gi|166033143|ref|ZP_02235972.1| hypothetical protein DORFOR_02865 [Dorea formicigenerans ATCC
           27755]
 gi|166027500|gb|EDR46257.1| hypothetical protein DORFOR_02865 [Dorea formicigenerans ATCC
           27755]
          Length = 479

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 106/360 (29%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          R++   +L ++F E  F+ + +  +  S       +        
Sbjct: 138 AHLRPRTNTFQAVFRVRSLTAYALHKFFQERGFVYVHTPIITGSDCEGAGEMFRVTTMDM 197

Query: 60  -RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                TE    D+      K   L  S + + +    A    ++ F   +R        H
Sbjct: 198 ENVPKTEDGAVDYTQDFFGKETSLTVSGQLNAETYAQA-FGNVYTFGPTFRAENSNTTRH 256

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E  M    ++++                     + PE +    +
Sbjct: 257 AAEFWMLEPEMAFADLEDDMDLAEDMLKYVINYV-------------MENAPEEMNFFNS 303

Query: 174 FARYANIDLGTTLDNPDQP--DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           F     ID  T +   +             ++   +     +W           +   + 
Sbjct: 304 FVDKGLIDRLTNVATSEFARITYTDAIEILKKHNDKFEFKVSWGIDLQTEHERYLTEEVY 363

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                 +  YP    A       D +     +     I E+        D  +   R E+
Sbjct: 364 KRPV-FVTDYPKDIKAFYMKQNPDGKTVAAVDCLVPGIGEIIGGSQREDDYEKLATRMEE 422

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              + +         D  F   L      + +G  +GF+R +M +TG  NI +V+  P +
Sbjct: 423 LGMKTE---------DYGFYMDLRKYGSTRHAGFGLGFERCIMYLTGMGNIRDVVPFPRT 473


>gi|160882412|ref|ZP_02063415.1| hypothetical protein BACOVA_00363 [Bacteroides ovatus ATCC 8483]
 gi|237714338|ref|ZP_04544819.1| asparaginyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262408170|ref|ZP_06084717.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|293369517|ref|ZP_06616096.1| asparagine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|294645460|ref|ZP_06723161.1| asparagine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294806728|ref|ZP_06765555.1| asparagine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|299148165|ref|ZP_07041227.1| asparagine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|156112225|gb|EDO13970.1| hypothetical protein BACOVA_00363 [Bacteroides ovatus ATCC 8483]
 gi|229445502|gb|EEO51293.1| asparaginyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262353722|gb|EEZ02815.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292635402|gb|EFF53915.1| asparagine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292639161|gb|EFF57478.1| asparagine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294446010|gb|EFG14650.1| asparagine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|295088081|emb|CBK69604.1| asparaginyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
 gi|298512926|gb|EFI36813.1| asparagine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 467

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 105/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDERGSISYEDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A            + F +     + E 
Sbjct: 242 LAEFWMIEPEVAFNDITDNMDLAEEFIKYCVKWALDNCADDVKFLNDMFDK----GLIER 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
                  D           D   +  +A   G +      W  D+ S      +E +   
Sbjct: 298 LQGVLKDDFVRLPY----TDGIKILEEAVAKGHKFEFPVYWGVDLASEHERFLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYNKLMTRIEEM 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 461


>gi|288803206|ref|ZP_06408640.1| asparagine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288334247|gb|EFC72688.1| asparagine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 463

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/352 (15%), Positives = 102/352 (28%), Gaps = 37/352 (10%)

Query: 13  DFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
               R   F      R+ +  ++ +YF E+ F    +  +  S      ++  F    + 
Sbjct: 121 HMRLRTNTFGAVFRIRHNMAIAIHQYFHEHGFYYFHTPLITGSDAEGAGNM--FQVTTLD 178

Query: 69  QD--------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
            D              +     L  S +   +    A    I+ F   +R        H 
Sbjct: 179 LDRIAKGGEVDYSADFFGKRTNLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPRHL 237

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A     +LM    + I+     A +              +          
Sbjct: 238 AEFWMVEPEVAFIDKNELMDLEEDFIKYCVRWALEHCKDDLEFLNMRIDKG-------LI 290

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQ-AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           AR   +     +         +L    A              D+ S      +E +    
Sbjct: 291 ARLEGVLKEEFVRLTYTEGIEILQKAVADGVKFEFPITGWGMDLSSEHERYLVEEH--FK 348

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP+   +       D +  +  ++   +I       E++    +   ++K + 
Sbjct: 349 RPVIMTDYPSEIKSFYMKKNPDGKTMQGTDVLFPHI------GEIIGGSVREENYDKLLA 402

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           E      +    D              G  +GF+RL++ VTG  NI +VI  
Sbjct: 403 EIDNRGMKREVYDWYLDTRKYGTCPHGGFGLGFERLILFVTGMQNIRDVIPF 454


>gi|116789233|gb|ABK25168.1| unknown [Picea sitchensis]
          Length = 566

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/335 (15%), Positives = 105/335 (31%), Gaps = 41/335 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               ++ +    R++ +   F+E+ +  L       +   +        D+  +P  L  
Sbjct: 260 IFRVQSYVSMLFRQFLISEGFVELHTPKLI---AGASEGGSSV---FKLDYKGQPACLAQ 313

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+   +  + A   ++F     +R  +     H  EFT L+     + +   + D ++ 
Sbjct: 314 SPQLHKQMAICADFGRVFEIGPVFRAEDSFTHRHLCEFTGLDLEMEIKEHYFEVLDILDK 373

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +         +    +    N     E +       R                       
Sbjct: 374 LFITIFDGLNEHCKKELHAINQQYPFEPLKYLRKTLRLT---------------FQEGVQ 418

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRF 258
             ++AGI V     ++    R L   +      +   IL RYP             DP +
Sbjct: 419 MLKEAGIEVDPLGDFNTETERKLGGLVREKYDTD-FYILHRYPLAVRPFYTMPCIDDPLY 477

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED----FLACLT 314
           +  F+++    E+ +    + +P     R       K+        ID +    ++    
Sbjct: 478 SNSFDVFIRGEEIISGAQRVHEPEFLTKR------AKELG------IDVNTISTYIDSFR 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  G+ +G +R+VML    NNI +    P  
Sbjct: 526 WGAVPHGGLGVGLERVVMLFCALNNIRKTSLFPRD 560


>gi|213428687|ref|ZP_03361437.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
          Length = 212

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 26/235 (11%)

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           MLEWYR H    +LM +  ++++   +                    E ++  +AF R+ 
Sbjct: 1   MLEWYRPHYDMYRLMNEVDDLLQQVLDC----------------QPAESLSYQQAFLRHL 44

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCT 236
            ID       P   D+  L   A +  +    D  +    +   +    +EP++G    T
Sbjct: 45  EID-------PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPT 97

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            +  +PA +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++ 
Sbjct: 98  FIYHFPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRA 157

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                  PID++ L  L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 158 ARGLPQQPIDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA 212


>gi|300769986|ref|ZP_07079865.1| asparagine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762462|gb|EFK59279.1| asparagine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 481

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 110/364 (30%), Gaps = 35/364 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          RN +  ++  +F E  F+ + +  +  S       +        
Sbjct: 118 AHLRFRTGTFNAIFKVRNALSFAVHRFFNERDFVYMHTPIITGSDAEGAGEMFRVTTLDL 177

Query: 60  -RAFSTE----LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                TE       +D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 178 NNPPRTENGDIDFKEDFFGKSTNLTVSGQLEGELAALA-FGNIYTFGPTFRAENSNTTRH 236

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M     +++   + A +          N   E E    A  
Sbjct: 237 LAEFWMIEPEMAFYELEDNMDLAEALLKYVIQYALETCPEEIEFLKNRLLEEEKNKPAAD 296

Query: 174 FARYANIDLGTTL--------DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +    I+                D  +        Q+   +   D+  +D+ S      
Sbjct: 297 RSEMDLIEKLKFCLENEFERVKYTDAIEILKRSKPNQKKQFKYLIDEWGADLQSEHERYL 356

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E +       IL  YP    +       +               L     E++   ++ 
Sbjct: 357 VEKH--FKKPVILTDYPREIKSFYMK--QNEPDALGRNTVRAMDILFPGIGEMVGGSQRE 412

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
              +K +    ++      + E FL          SG  +GF+RLV+ VTG  NI +VI 
Sbjct: 413 ENLDKLLARMAEVGIPAEEM-EWFLDTRRFGSVPHSGFGVGFERLVLFVTGMTNIRDVIP 471

Query: 345 TPFS 348
            P +
Sbjct: 472 FPRT 475


>gi|242242735|ref|ZP_04797180.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233871|gb|EES36183.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|319400806|gb|EFV89025.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 430

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 107/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F EN F +ID   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   ++F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDEDAFLSQSGQLYMEAAAMAH-GRVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +                      +   +   +  + D
Sbjct: 224 PEMAFTNHAESLEIQEQYVSHIVQSV--------------------LNHCQLELKALDRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +       +D  W + F       I  +   +    +  Y
Sbjct: 264 TTKLEKVATPFPRISYDDAIEFLKKEGFNDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P +       +L A     E+    + + D      R  +      ++
Sbjct: 322 PTKIKPFYMQPNPDNEDTVLCADLIAPEGYGEIIGGSERINDLELLEQRINE-----HEL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E+Y    D           SG  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEESYSYYLDLRR--YGSVPHSGFGLGLERTVAWISGVEHVRETSPFPRL 424


>gi|326526343|dbj|BAJ97188.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 550

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/343 (14%), Positives = 101/343 (29%), Gaps = 33/343 (9%)

Query: 11  NRDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI 67
           +   + R    +     ++ I+   REY     FI I +  L     +E     F  E  
Sbjct: 230 HPAINLRTPAVQAIFRIKHQIEHKFREYLSSRDFIGIHTPKLIS-GSSEGGAAVFKLEYK 288

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH 126
                 K   L  SP+   +  +  G  ++F   H +R  +     H  EF  ++     
Sbjct: 289 N----GKTACLAQSPQLHKQMAICGGLRRVFEVGHIFRAEDSNTHRHLCEFVGMDAEMEI 344

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
             +   + D ++           +         N     E +   E   R +        
Sbjct: 345 MRHYFEVCDIVDGFFVELFRHLNENCRTALEAVNRQYPFEPLKYLENTLRLSY------- 397

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
                          ++AG  V      +    R L + +      +   +     A   
Sbjct: 398 --------EEGIQMLKEAGTEVEPMGDLNTEAERKLGQLVREKYDTDFFILYRYPLAARP 449

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                   +P ++  F+++    E+ +    + +P     R  +   +K  I        
Sbjct: 450 FYTMPCYENPAYSNSFDVFLRGEEIISGAQRIHEPELLAKRVAEHGIDKNSI-------- 501

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +L       P   G  +G +R+V L  G ++I      P  
Sbjct: 502 KSYLESFSYGTPPHGGFGIGLERVVKLFCGLDDIRMASLFPRD 544


>gi|54298179|ref|YP_124548.1| asparaginyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81370098|sp|Q5X300|SYN_LEGPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|53751964|emb|CAH13388.1| asparagine tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 467

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R+ +  ++  ++ E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 LNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMS-KVYTFGPTFRAENSNTSRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + E + K   +++R       + +   +  + + F++       E 
Sbjct: 245 LAEFWMIEPEIAFANLEDICKLSQSMLRY----LCKTVLEERADDMDFFNQFVAPGCIER 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               A+ +        +           + +  +     +W           +   L   
Sbjct: 301 MEHIADSEF-------EIMTYTDAVKALEASDQKFEFPVSWGLDLQSEHERYLAEVLCKK 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP            D +             L     E++   ++  R E   +
Sbjct: 354 PV-IVTNYPQEIKGFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEILDR 406

Query: 294 EKKK--IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +  +  E Y    D           +G  +GF+RL+  VTG +N+ +VI  P +
Sbjct: 407 RMDECNLNKEHYQWYRDLRR--YGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRT 461


>gi|307611125|emb|CBX00769.1| asparagine tRNA synthetase [Legionella pneumophila 130b]
          Length = 467

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 111/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R+ +  ++  ++ E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 LNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMS-KVYTFGPTFRAENSNTSRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + E + K   N++R       + +   ++ + + F++       E 
Sbjct: 245 LAEFWMIEPEIAFANLEDICKLSQNMLRY----LCKTVLEERSDDMDFFNQFVAPGCIER 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               A+ +        +           + +  +     +W           +   L   
Sbjct: 301 MEHIADSEF-------EIMTYTDAIKALEASEQKFEFPVSWGLDLQSEHERYLAEVLCKK 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP            D +             L     E++   ++  R E   +
Sbjct: 354 PV-IVTNYPQEIKGFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEILDR 406

Query: 294 EKKK--IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +  +  E Y    D           +G  +GF+RL+  VTG +N+ +VI  P +
Sbjct: 407 RMDECNLNKEHYQWYRDLRR--YGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRT 461


>gi|27468060|ref|NP_764697.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866954|ref|YP_188601.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251810882|ref|ZP_04825355.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876112|ref|ZP_06284979.1| asparagine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366577|ref|ZP_06613254.1| asparagine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258361|sp|Q8CSI9|SYN_STAES RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|81674545|sp|Q5HP89|SYN_STAEQ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|27315605|gb|AAO04739.1|AE016747_236 asparaginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637612|gb|AAW54400.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|251805562|gb|EES58219.1| asparaginyl-tRNA synthetase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295137|gb|EFA87664.1| asparagine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319346|gb|EFE59715.1| asparagine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329725417|gb|EGG61900.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU144]
 gi|329735367|gb|EGG71659.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737271|gb|EGG73525.1| asparagine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 430

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 106/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F EN F +ID   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   ++F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDEDAFLSQSGQLYMEAAAMAH-GRVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +                      +   +   +  + D
Sbjct: 224 PEMAFTNHAESLEIQEQYVSHIVQSV--------------------LNHCQLELKALDRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 264 TTKLEKVATPFPRISYDDAIEFLKKEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P +       +L A     E+    + + D      R  +      ++
Sbjct: 322 PTKIKPFYMQPNPDNEDTVLCADLIAPEGYGEIIGGSERINDLELLEQRINE-----HEL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E+Y    D           SG  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEESYSYYLDLRR--YGSVPHSGFGLGLERTVAWISGVEHVRETSPFPRL 424


>gi|332519134|ref|ZP_08395601.1| asparaginyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332044982|gb|EGI81175.1| asparaginyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 476

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/376 (15%), Positives = 119/376 (31%), Gaps = 42/376 (11%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +   + H R R       +  R+ +  ++ +YF +N F  + +  +  S    
Sbjct: 105 PKKHSFEFLRENAHLRTRTNTFSAVMRLRSALSFAIHKYFNDNGFYYMHTPIITGSDAEG 164

Query: 56  ETHI---------RAFSTELII----QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
              +         +   TE       ++   K   L  S +   +   A    K++ F  
Sbjct: 165 AGEMFRVSTLDQKKPPLTEDGDIDHTKNFFGKDTNLTVSGQLEAETY-AMSLGKVYTFGP 223

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A       M    + ++       +            
Sbjct: 224 TFRAENSNTSRHLSEFWMIEPEVAFMDLAGNMDLAEDFMKSVISYILENNAEDLEFLDKR 283

Query: 162 FSEPEYITVAEAFA--------RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
             + E        +        ++   +    +   +  D        ++       ++ 
Sbjct: 284 LKDEEKTKPQAERSDLSLIEKLKFVTENNFKRVSYTEAIDILKKSKPNKKKKFNYIIEEW 343

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
            +D+ S      +E +    C  IL  YPA   A       D +  +  ++    I    
Sbjct: 344 GADLQSEHERFLVEKH--FKCPVILFDYPANIKAFYMRLNEDGKTVRAMDILFPGI---- 397

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVML 332
              E++   ++  R +   ++   +      +   +L          SG  +GF+RLVM 
Sbjct: 398 --GEMVGGSQREERLDVLKEKMAVLNIPEEEL-WWYLDLRKYGTAVHSGFGLGFERLVMF 454

Query: 333 VTGANNINEVIWTPFS 348
            TG +NI +VI  P +
Sbjct: 455 ATGMSNIRDVIPYPRT 470


>gi|317505009|ref|ZP_07962957.1| asparagine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315663891|gb|EFV03610.1| asparagine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 463

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/353 (16%), Positives = 109/353 (30%), Gaps = 33/353 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE------THIRA 61
            H R R          R+ +  ++ +YF ++ F    +  +  S           T +  
Sbjct: 120 AHLRLRTNTFGAVFRIRHNMAIAVHKYFHDHGFYYFHTPIITASDAEGAGEMFQVTTLDL 179

Query: 62  FSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
             T         K  +     L  S +   +    A    I+ F   +R        H  
Sbjct: 180 SRTGKDDTVPYEKDFFGKKTNLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPRHLA 238

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A    ++LM    + I+   + A          +    ++    T+ E   
Sbjct: 239 EFWMIEPEVAFLEQDELMDLEEDFIKYCVQWA----LDNCKDDLEFLNKMIDKTLLETLE 294

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
              ++     +        H+L    +Q          W    S      +         
Sbjct: 295 ---SVVKERFVRLTYTEGIHILEEAVKQGHQFEFPITGWGMDLSSEHERYLVEEY-FKRP 350

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            I+  YP+   A      AD R  +  ++    I       E++    +   ++K + E 
Sbjct: 351 VIMTDYPSEIKAFYMKKNADGRTMQGTDVLFPRI------GEIIGGSVREESYDKLVAEI 404

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           K    E                  +G  +GF+RL++ VTG  NI +VI  P +
Sbjct: 405 KARGMEKDSYSWYLDTRKYGSCPHAGFGLGFERLILFVTGMQNIRDVIPFPRT 457


>gi|312863455|ref|ZP_07723693.1| asparagine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100991|gb|EFQ59196.1| asparagine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 448

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 119/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++      RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQMAVQQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQK--------IFSFQNVNCNPFSEPEYITVAEAF 174
             +  S+++ +      ++   +    +              +        + ++  EA 
Sbjct: 236 EYSFLSHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEA- 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D   L                  D F       I    G+  
Sbjct: 295 -----IDLLQAHENDEDTDYEHLE---------------HGDDFGSPHETWISNYFGV-- 332

Query: 235 CTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA  ++      P +P      +L            E++    +   ++  + 
Sbjct: 333 PTFVVNYPASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDDYDALVG 387

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  ++  +     E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 388 KMDELGMDRSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|227513353|ref|ZP_03943402.1| asparaginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227524496|ref|ZP_03954545.1| asparaginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227083226|gb|EEI18538.1| asparaginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227088366|gb|EEI23678.1| asparaginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 426

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 111/350 (31%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R    +  RN +  +  ++F +  FI+ID+  L   +P         
Sbjct: 110 MDHRHLWLRSS--RPHAVMRIRNEVIKATYDFFNDEGFIKIDAPILTGSAPEG------- 160

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L    +  K  YL  S +   ++  A    K+F F   +R  +     H  EF M+E
Sbjct: 161 TTDLFHTTYFDKDAYLSQSGQLY-EEAGAEAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 219

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ +      I    +                      I   +   +    D
Sbjct: 220 PEMAFMHQEESLDIQERYIAYLVQRV--------------------IDNCQMELKTLGRD 259

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + T       P   + Y +A     +   D  W   F       +      +    +  Y
Sbjct: 260 IETLKKYTILPYPRISYDEAIDLLKKNDFDLDWGVDFGSPEETFLADQ--FDQPVFVLNY 317

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKKIY 299
           P             P  T+   +   ++       E++   E+   ++   +   K  + 
Sbjct: 318 PKAIKPFYM----KPHPTRDDVVICADLLAPEGYGEIIGGSERAVDYDYLYDQIVKAGLD 373

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + Y     +L          SG  +G +R +  +TG +++ E I  P  
Sbjct: 374 PKEY---SWYLDLRKYGSVPHSGFGLGLERALTWITGEDHVREAIPFPRL 420


>gi|42526492|ref|NP_971590.1| asparaginyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|59798569|sp|Q73P19|SYN_TREDE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|41816685|gb|AAS11471.1| asparaginyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 473

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 112/365 (30%), Gaps = 53/365 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNET-HIRAFST 64
            H R R          R+ +  ++  +F E  F  + +  +  S      E  H+  F  
Sbjct: 124 AHLRARTNTFGAVARIRSQMAYAIHTFFQERGFQYVHTPIITGSDCEGAGEMFHVTTFDI 183

Query: 65  ELIIQDHI-------------RKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
           E  ++  +              +  +     L  S +   +    A   +I+ F   +R 
Sbjct: 184 EETVKKALKEKKDPDSFKIDYSQDFFGKQANLTVSGQLEGETYATA-LSRIYTFGPTFRA 242

Query: 107 GEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
                  H  EF M+E   +  + ++ M+     I    + A +K               
Sbjct: 243 ENSNTSRHLAEFWMVEPEMSFFTIKENMELAEEFIVYLLKWALEKCK------------- 289

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ--QAGIRVAHDDTWSDIFSRILI 223
           E +   ++  +   I++   + N            A+  +   R      W         
Sbjct: 290 EDLEFFDSRIKKGLIEMLKNVVNTPFTRLTYTEAIAELEKHIDRFEFKPYWGCDLQSEHE 349

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             +   +      I+  YP    +       D +  +  ++    +       E  + ++
Sbjct: 350 RFLTEEVYKGPV-IVTNYPKEIKSFYMKLNEDGKTVRAMDVLVPGLGEIIGGSEREENLD 408

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
                  + + K+    E       +L          SG  +GF+RL++ VTG  NI +V
Sbjct: 409 IL-----QGRIKELGLREEDY--WWYLDLRRYGTVPHSGFGLGFERLLLYVTGMGNIRDV 461

Query: 343 IWTPF 347
           I  P 
Sbjct: 462 IPFPR 466


>gi|116512707|ref|YP_811614.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           SK11]
 gi|123025218|sp|Q02X21|SYN_LACLS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116108361|gb|ABJ73501.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           SK11]
          Length = 447

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 119/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    R+   +  RN I  +  ++F +N FI+ DS  L    GN       +
Sbjct: 124 LDNRHLWLRSK--RQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILS---GNAAEN---T 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+     +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGNSAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIR--------CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
                ++++ +      ++         AA            +     +  + ++  +A 
Sbjct: 235 EYPFVTHDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDDA- 293

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N D  D                      D F       I    G+  
Sbjct: 294 -----IDLLQAHENDDDTDYE---------------HVEHGDDFGSPHETWISNYYGV-- 331

Query: 235 CTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA  ++      P +P      +L            E++   E+   ++  ++
Sbjct: 332 PTFIVNYPASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSERETDYDLLLK 386

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +      +    D  +L          +G  +G +R+V  V G  +I E I  P  
Sbjct: 387 KIADFGLDPKDYDW-YLELRKFGSVPHAGFGLGLERMVTFVAGTEHIREAIPFPRM 441


>gi|306831775|ref|ZP_07464931.1| asparagine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425973|gb|EFM29089.1| asparagine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 448

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 118/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   +  RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDHRHLWLRSR--KQMAIMQVRNAIIYASYEFFDKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +      +      +     +AE F R +  D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVLDRAPQALEI-LERDVDLLKKYIAEPFKRVSYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            + L   +  +                      D F       I    G+   T +  YP
Sbjct: 295 ISLLQEHENDEDA------------DYEHLEHGDDFGSPHETWISNYFGV--PTFVINYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +   +  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSVREDDYDALVAKMDALEMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          +G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEY-EFYLDLRKYGSVPHAGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|332297531|ref|YP_004439453.1| Asparaginyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180634|gb|AEE16322.1| Asparaginyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 484

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 104/371 (28%), Gaps = 60/371 (16%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R+ +  ++  +F +  F  + +  +  S       +   +T   
Sbjct: 130 AHLRARTNTFGAVARMRSQMAYAIHTFFQDRGFQYVHTPIITASDAEGAGEMFQVTTLSM 189

Query: 67  -------------------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
                                      +D   K   L  S +   +    A   +++ F 
Sbjct: 190 EKIAENGVSAGAKGMSAEKAAALVDYGKDFFGKKASLTVSGQLEAETYATA-LSRVYTFG 248

Query: 102 HAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
             +R        H  EF M+E   A       M      ++     A  K       +  
Sbjct: 249 PTFRAENSNTTRHLAEFWMIEPEIAFFDLNDNMDIAEEFVKYLLNWALTKC----TADMQ 304

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
            F++     + +  A   N D                  + ++   +      W      
Sbjct: 305 FFNDRIQKGIIDTLAHVVNSDFVRITYTE-------AVAELEKNADKFEFKPYWGCDLQS 357

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELL 279
              + +   +      I+  YP    A       D +  +  ++    + E+    +   
Sbjct: 358 EHEKFLTE-VVYKRPVIVTGYPKEIKAFYMKLNEDGKTVRAMDVLVPGLGEIIGGSEREA 416

Query: 280 DPIEQRHRFEKEMQEKKKI---YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGA 336
           D      R       +K      +  + +D   L         SG  +GF+RL++ VTG 
Sbjct: 417 DYDVLLDR------IRKLGLNPDDYRWYLD---LRRF-GSVPHSGFGLGFERLLLYVTGM 466

Query: 337 NNINEVIWTPF 347
            NI +VI  P 
Sbjct: 467 GNIRDVIPYPR 477


>gi|227510345|ref|ZP_03940394.1| asparaginyl-tRNA synthetase [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227189997|gb|EEI70064.1| asparaginyl-tRNA synthetase [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 426

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 111/350 (31%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R    +  RN +  +  ++F +  FI+ID+  L   +P         
Sbjct: 110 MDHRHLWLRSS--RPHAVMRIRNEVIKATYDFFNDEGFIKIDAPILTGSAPEG------- 160

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L    +  K  YL  S +   ++  A    K+F F   +R  +     H  EF M+E
Sbjct: 161 TTDLFHTTYFDKDAYLSQSGQLY-EEAGAEAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 219

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ +      I    +                      I   +   +    D
Sbjct: 220 PEMAFMHQEESLDIQERYIAYLVQRV--------------------IDNCQMELKTLGRD 259

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + T       P   + Y +A     +   D  W   F       +      +    +  Y
Sbjct: 260 IETLKKYTILPYPRISYDEAIDLLKKNDFDLDWGVDFGSPEETFLADQ--FDQPVFVLNY 317

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKKIY 299
           P             P  T+   +   ++       E++   E+   ++   +   K  + 
Sbjct: 318 PKAIKPFYM----KPHPTRDDVVICADLLAPEGYGEIIGGSERAVDYDYLYDQIVKAGLD 373

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + Y     +L          SG  +G +R +  +TG +++ E I  P  
Sbjct: 374 PKEY---SWYLDLRKYGSVPHSGFGLGLERALTWITGEDHVREAIAFPRL 420


>gi|332685897|ref|YP_004455671.1| asparaginyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332369906|dbj|BAK20862.1| asparaginyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 464

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 102/358 (28%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+++  ++  +F E  F+ + +  +  S       +  F    +
Sbjct: 123 AHLRPRTSTYYSVFRIRSLVSYAIHRFFQERDFVYVHTPLITSSDSEGAGEM--FRVTTL 180

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGC 111
             +++ K            +     L  S +   +    A     + F   +R       
Sbjct: 181 DLNNLPKTETGEVDNSEDFFRRQTNLTVSGQLPAEAFALA-FGNTYTFGPTFRAENSHTA 239

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M     ++    E   +K             +     + 
Sbjct: 240 RHASEFWMIEPEMAFADLTDSMDIAEALLHYVIEYVLEKAPEELEFLTQNIDQGLLTRLR 299

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E           T   +  +          Q++     +  TW           I   + 
Sbjct: 300 E-----------TAKTSFARVTYSEAIELLQKSNHTFDYPVTWGIDLQTEHERYICEEI- 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
            +    +  YP    A       D       +L    I       EL+   ++  R +  
Sbjct: 348 FDRPVFITDYPEKIKAFYMRQNEDKETVAAMDLLVPRI------GELIGGSQREERKDVL 401

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +         E +L          SG  +GF+RL+M VTG  NI +VI  P +
Sbjct: 402 ATRMAEFGLTVDDY-EWYLELREYGETVHSGFGIGFERLIMYVTGMENIRDVISFPRT 458


>gi|302338751|ref|YP_003803957.1| asparaginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635936|gb|ADK81363.1| asparaginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 462

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 99/356 (27%), Gaps = 42/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  +F E  FI + +  +  S       +   +T  +
Sbjct: 122 AHLRPRTNTFGAVTRVRNQLSWAVHRFFQEQGFIYVHTPLISTSDCEGAGEMFQVTTLPL 181

Query: 68  ------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                        QD   K   L  S +   +   +A    ++ F   +R        H 
Sbjct: 182 EKVPLKEGKIDYSQDFFGKRASLTVSGQLEAEIYASA-FSDVYTFGPTFRAENSNTTRHL 240

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       M+     ++              + +   F++     + ++ 
Sbjct: 241 AEFWMIEPEMAFCDLAGNMELAEAFLKNILSSV----LEHCSEDMKFFNQWVEKGIIDSL 296

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            +   ID   T  +  +          +           W           +   +    
Sbjct: 297 EKV--IDTPFTHMSYTEA-----VQALKTGKTNFEFPVEWGSDLQSEHERFLTETVCKGP 349

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             I+  YP    +    +            L     E+    +          R      
Sbjct: 350 V-IVTDYPKEIKAFYMKLNDDGKSVAAMDVLVPRLGEIIGGSERESRLSVLEQRIHD--- 405

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +  E Y     +L          SG  +GF+RL+  VTG  NI +VI  P +
Sbjct: 406 --TGLNPEEY---WWYLDLRRFGTVPHSGFGLGFERLIQYVTGMQNIRDVIPFPRT 456


>gi|229029921|ref|ZP_04185990.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228731429|gb|EEL82342.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 428

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 108/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ VEN F  I +  +    G E     F        + +
Sbjct: 120 RHERTEAIFKVKSTLVQSFSEFLVENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 173

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 174 KEAYLAQSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 233

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 234 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPAITEIPKI 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +   ++ +          ++L + ++          +  YP     +   
Sbjct: 274 TLLE-AQEVLKNKYLKESPIGDLDTEGEKLLGKYVKETYKSELV-FITHYPKGARPMYTM 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + D       F      K+K  +      + +L
Sbjct: 332 PNKENSSITDSFDLLYKGLEITSGAQRIHDYEMLLASF------KEKGLHPDKF--QSYL 383

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    NI E    P  
Sbjct: 384 NTFRYGCPPHGGFGIGLERIVYKLLELTNIREASAFPRD 422


>gi|300214471|gb|ADJ78887.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 385

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/352 (16%), Positives = 118/352 (33%), Gaps = 46/352 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F +  FI++D+  L   +P         
Sbjct: 67  MDHRHLWLRSK--KQFAIMQIRNEMIRATYEFFNKEGFIKLDAPILTGSAPEG------- 117

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++  +  YL  S +   ++  A    K+F F   +R  +     H  EF M+E
Sbjct: 118 TTELFHTEYFDRDAYLSQSGQLY-EEAGAMAYGKVFSFGPTFRAEKSKTRRHLIEFWMIE 176

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      +   +   +    D
Sbjct: 177 PEMAFMHQEESLEIQERYVAYLVQSV--------------------LDNCQYPLQILGRD 216

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                   + P   + Y +A +   +     D  W + F       +  +   +    + 
Sbjct: 217 TEVLKRYTELPYPRISYDEAIELLQQSGKFPDVKWGEDFGSPEETYLAEH--FSKPVFVM 274

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH--RFEKEMQEKKK 297
            YP             P  T+   +   ++       E++   E+    ++ +E   K  
Sbjct: 275 NYPKAIKPFYM----KPHPTRDDVVICADMLAPEGYGEIIGGSERATDPKYLEEQIIKAG 330

Query: 298 IYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  + Y   E +L          SG  +G +R V  +TG ++I E I  P  
Sbjct: 331 LDVKDY---EWYLDLRRYGSVPHSGFGLGLERAVTWITGEDHIREAIPFPRL 379


>gi|72390029|ref|XP_845309.1| aspartyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62359273|gb|AAX79715.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70801844|gb|AAZ11750.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
 gi|261328702|emb|CBH11680.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 560

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 117/359 (32%), Gaps = 35/359 (9%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W              ++ +    R++ ++++F+EI S  +  +  +E     F       
Sbjct: 211 WLDLRSPASNAIFRIQSRVGQYFRQFLIDSEFVEIHSPKIIATA-SEGGANVFK-----L 264

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR-AHE 127
            +  +  YL  SP+   +  L    +++F     +R        H  EF  L+     +E
Sbjct: 265 GYFNRDAYLAQSPQLYKQIALQGDLKRVFEVGPVFRAENSNTHRHLTEFVGLDVEMRINE 324

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
            Y +++     +     E  +      + +      EP    ++    +   +       
Sbjct: 325 HYYEVLDLAEELFCHMFERLSGHNAELEAIKRQYPFEPLVWQMSAERMKELGVGAIEEDT 384

Query: 188 NPDQPDRHLLYLQAQQ----------------AGIRVAHDDTWSDIFSRILIEKIEPNLG 231
            P    +  +     +                   ++   D  +    ++L + ++   G
Sbjct: 385 EPTDTYKARVRNSNLRMLRINYPDCVALLNTVLETKLDPTDDINTTNEKLLGKLVKERYG 444

Query: 232 INCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
           ++   I DR+P+          P D RFT  F+++    E+ +    + D      R   
Sbjct: 445 VD-FFISDRFPSAARPFYTMPCPNDERFTNSFDMFIRGEEISSGAQRIHDASLLLQR--A 501

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +         P+  D++           G  +G +R+VML  G +N+      P  
Sbjct: 502 QSLQVDLG-----PV-SDYVDSFRLGAWPHGGFGVGLERVVMLYLGLHNVRLTSLFPRD 554


>gi|313901753|ref|ZP_07835180.1| asparaginyl-tRNA synthetase [Thermaerobacter subterraneus DSM
           13965]
 gi|313467989|gb|EFR63476.1| asparaginyl-tRNA synthetase [Thermaerobacter subterraneus DSM
           13965]
          Length = 430

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 62/350 (17%), Positives = 110/350 (31%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF 62
           +  +  W R    R+   L  R  +  +  E   E  F+ +D+  L  S P   T++  F
Sbjct: 114 MDHRHLWIRT--PRQNAVLRVRAAVMQAAAEVLAEEGFVRVDAPILTPSAPEGTTNL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T     D+  +  YL  S +   +    A   K++C    +R  +     H  EF MLE
Sbjct: 170 ET-----DYFGEKAYLSQSGQLYMEAACMA-LGKVYCLGPTFRAEQSKTRRHLLEFWMLE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++E  +     ++R                          +            D
Sbjct: 224 PEAAFFTHEDNVALQERLVRGIVLRV--------------------LDQCARELETLGRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             T     + P   + Y  A +   R      W + F       +  + G      ++R+
Sbjct: 264 PETLRREVEAPFVRISYDDALRILDRQGLGLPWGEDFGAPHETALSEHFG--RPVFVERF 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           PA   +      P  P      +L A     E+      + D      R ++    ++ +
Sbjct: 322 PAQVKAFYMEPDPERPEVALCADLLAPEGYGEIIGGSQRISDLDLLLRRIDEHGLSRQAL 381

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + ID             SG  +G +R V  + G  ++ E I  P  
Sbjct: 382 ---AWYIDLR----RYGSVPHSGFGLGIERTVAWICGLEHVREAIPFPRL 424


>gi|332092538|gb|EGI97611.1| asparaginyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 466

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 106/356 (29%), Gaps = 41/356 (11%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +  +   W    S      +       
Sbjct: 300 LERFIEADFAQV-------DYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDE 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+        L         SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMLEMGLNKENYWWYRDLR-RYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|88802055|ref|ZP_01117583.1| asparaginyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782713|gb|EAR13890.1| asparaginyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 477

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 121/382 (31%), Gaps = 54/382 (14%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +   + H R R       +  R+ +  ++ +YF +N F  +++  +  S    
Sbjct: 106 PKKHSFEFLRENAHLRIRTNTFSAVMRVRSKLSFAVHKYFQDNGFNYVNTPIVTGSDAEG 165

Query: 56  ETHIRAFSTELIIQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCF 100
              +  F       +             K  +     L  S +   +    A   K++ F
Sbjct: 166 AGEM--FRVTSFEDNKAPVTEDGKIDYTKDFFGKETNLTVSGQLEAEAYAMA-LGKVYTF 222

Query: 101 AHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A    +  M    + I+       +          
Sbjct: 223 GPTFRAENSNTTRHLAEFWMIEPEVAFMDLDGNMDLAEDFIKSVLTYVLEHCKDDLAFLD 282

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTL--------DNPDQPDRHLLYLQAQQAGIRVAHD 211
             F + E        +  + ++    +           +  D        ++   +   +
Sbjct: 283 ERFVQEEKAKPQLQRSEMSLLEKLKFVADNNFKRVSYTEAIDILRNSKPNKKKKFQYPIN 342

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
              +D+ S      +E +    C  IL  YPA   A       D +  +  ++    I  
Sbjct: 343 AWGADLQSEHERFLVEKH--FKCPVILFDYPADIKAFYMRLNEDGKTVRAMDVLFPGI-- 398

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE----DFLACLT-EMPQSSGIAMGF 326
                E++   ++  R++  + + K        IDE     +L          SG  +GF
Sbjct: 399 ----GEMVGGAQREERYDVLIAKMK-----AMHIDEKELWWYLDLRKFGTAVHSGFGLGF 449

Query: 327 DRLVMLVTGANNINEVIWTPFS 348
           +RLV   TG  NI +VI  P +
Sbjct: 450 ERLVQFTTGMGNIRDVIPFPRT 471


>gi|255994853|ref|ZP_05427988.1| asparagine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993566|gb|EEU03655.1| asparagine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 462

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 109/350 (31%), Gaps = 37/350 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            + R R          R++I  +L  +F +  F+   +  +  +       +   +T   
Sbjct: 129 AYLRPRANTFQAVFRLRSVIAHALHCFFQDRNFVYSHTPIITANDCEGAGELFRVTTLES 188

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            ++   K  +     L  S +    + +A     ++ F   +R        H  EF M+E
Sbjct: 189 NEEDFSKDFFAEKTGLTVSGQLEA-EAMALAFRNVYTFGPTFRAENSNTPRHASEFWMIE 247

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A       M    ++I+     A +K              P  +   ++F     I 
Sbjct: 248 PEIAFADLSDDMDLAEDMIKHIINAAFEK-------------APFEMKFFDSFIEKGIIK 294

Query: 182 LGTTLDNPDQP--DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
               + N D             ++A     +   W           +     I     + 
Sbjct: 295 RLEAVMNADFKRMTYTEAIDVLKKAKKPFEYPVEWGLDLQTEHERYLSEE-VIRGPVFVT 353

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKKKI 298
            YP+   A       D +     +L    +       E++   ++  R +  + + +   
Sbjct: 354 DYPSQIKAFYMRENDDGKTVAACDLLVPGV------GEIIGGSQREERLDILDRRMQDAG 407

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            N         L       + +G  +GFDR++M +TG  NI +VI  P +
Sbjct: 408 INPEELSWYRELRK-YGGVKHAGFGLGFDRIIMYLTGMKNIRDVIPFPRT 456


>gi|254446739|ref|ZP_05060214.1| asparaginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198256164|gb|EDY80473.1| asparaginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 461

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 99/358 (27%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  +F + QF  + +  +  S       +  F    +
Sbjct: 120 AHLRPRTNFYGAVFRIRSKLAFAIHRFFNDRQFFYVHTPIVTASDCEGAGEL--FRVSTL 177

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                            D   +  YL  S +   +   +A    I+ F   +R       
Sbjct: 178 DPKNPPLGEGGEIDSSKDFFGRSTYLTVSGQLEGETYASA-LGNIYTFGPTFRAENSNTS 236

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M      ++       +++      +   F         
Sbjct: 237 RHASEFWMIEPEMAFCDLAADMDLAEEFVKS----VIKEVMESCADDLELFFNFID---K 289

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E   R   +               +L    ++   +V        + S       E +  
Sbjct: 290 ELRQRLEFVLSRPFQRVTYTEAVEILQACGKKFENKVEWGVN---LQSEHERYLTEEHFK 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP            D +     ++    I       +  + +E        
Sbjct: 347 S--PVTVYDYPKELKPFYMRANDDGKTVAAMDVLVPGIGEIVGGSQREERLELLL----- 399

Query: 292 MQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              KK   +E       ++          +G  +GF+RL+M +TG  NI +VI  P  
Sbjct: 400 ENMKKHGISEKDY--WWYVDLRRYGSMPHAGFGLGFERLLMFITGVGNIRDVIPYPRV 455


>gi|281492440|ref|YP_003354420.1| asparaginyl-tRNa synthetase [Lactococcus lactis subsp. lactis
           KF147]
 gi|281376104|gb|ADA65595.1| Asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis
           KF147]
          Length = 447

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 119/356 (33%), Gaps = 49/356 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    R+   +  RN I  +  ++F +N FI+ DS  L    GN       +
Sbjct: 124 LDNRHLWLRSK--RQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILS---GNAAEN---T 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+     +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGNSAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIR--------CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
                ++++ +      ++         AA            +     +  + ++  +A 
Sbjct: 235 EYPFVTHDESLDIQEAYVKALIQGVLDNAAYALETLERDTSMLQKYIDTPFKRVSYDDA- 293

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                IDL    +N +  D                      D F       I    G+  
Sbjct: 294 -----IDLLQAHENDEDTDYE---------------HVEHGDDFGSPHETWISNYYGV-- 331

Query: 235 CTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            T +  YPA  ++      P +P      +L            E++   E+   ++  ++
Sbjct: 332 PTFIVNYPASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSERETDYDLLLK 386

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +      +    D  +L          +G  +G +R+V  V G  +I E I  P  
Sbjct: 387 KIADFGLDPKDYDW-YLELRKFGSVPHAGFGLGLERMVTFVAGTEHIREAIPFPRM 441


>gi|242045666|ref|XP_002460704.1| hypothetical protein SORBIDRAFT_02g033440 [Sorghum bicolor]
 gi|241924081|gb|EER97225.1| hypothetical protein SORBIDRAFT_02g033440 [Sorghum bicolor]
          Length = 552

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 102/370 (27%), Gaps = 59/370 (15%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMS------------------LQ 50
            H R R          RN +  +  ++F +N F+ + S                    L 
Sbjct: 201 AHLRPRTNTFGAVARVRNALAYATHKFFQDNGFVWVSSPIITASDCEGAGEQFYVTTLLS 260

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
            S    + ++        +    +  +     L  S + + +   +A    I+ F   +R
Sbjct: 261 NSAEGGSLLKDIPATKDGRVDWSQDFFCKPAFLTVSGQLNGETYASA-LSDIYTFGPTFR 319

Query: 106 NGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                   H  EF M+E   A       M      ++   +   +               
Sbjct: 320 AENSNTARHLAEFWMIEPELAFADLNDDMACATAYLQYVVKYILENCK------------ 367

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA----GIRVAHDDTWSDIFSR 220
            E +     +     ID     D  ++   HL Y  A +              W      
Sbjct: 368 -EDMDFFNTWVEKGIIDRLN--DVVEKNFIHLSYTDAVELLLGSKKEFEFPVKWGLDLQS 424

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
                I          I+  YP    A       D +     +L    +       +  +
Sbjct: 425 EHERYITEVALGGRPVIIRDYPKEIKAFYMRENNDGKTVAAMDLLVPRVGELIGGSQREE 484

Query: 281 PIEQRH-RFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANN 338
            ++    R +++   K+            +L          +G  +GF+RLV   TG +N
Sbjct: 485 RLDYLEARLDEQNLNKESY--------WWYLDLRRYGSVPHAGFGLGFERLVQFATGIDN 536

Query: 339 INEVIWTPFS 348
           I + I  P  
Sbjct: 537 IRDAIPFPRV 546


>gi|221484039|gb|EEE22343.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 763

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 101/334 (30%), Gaps = 31/334 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     ++      RE+ +   F+E+ S  L    S G  +             +  +  
Sbjct: 451 QAIFRIQSETLQLFREFLLSRNFVELHSPKLIGGASEGGAS--------CFTLKYFNRDA 502

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  + A  E++F     +R        H  EFT L+     + +   + D
Sbjct: 503 CLAQSPQLYKQMAMCADFERVFEIGPVFRAENSNTHRHLCEFTGLDLEMTFKEHYSEVLD 562

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +         +    +    +     E  T  E   R +  +    L     P+  
Sbjct: 563 LLDDLFKFIFKGLSERCKKEIDLFHQQHPAEPFTWIEETPRLSFEEGVQMLREAGCPNI- 621

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                          +   S    ++L   ++     +   +L              P +
Sbjct: 622 ----------PEDLSEFDLSTEQEKMLGRLVKEKYHTDFYMLLQYPLKVRPFYTMPDPHN 671

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
             ++  ++ +  N E+ +    + D      R  +              I + ++     
Sbjct: 672 KMYSNSYDFFMRNEEITSGAQRVHDADLLTQRCLEC-------GVPPSSI-QTYIDSFRL 723

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 G  +G +R+VML  GA NI +V   P  
Sbjct: 724 GTAPHGGAGIGLERVVMLFLGAKNIRQVSLFPRD 757


>gi|91215097|ref|ZP_01252069.1| asparaginyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91186702|gb|EAS73073.1| asparaginyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 480

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 58/376 (15%), Positives = 122/376 (32%), Gaps = 44/376 (11%)

Query: 5   PSQPWWNR---DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +  + +     H R R       +  R+ +  ++ +YF +N F  +++  +  S    
Sbjct: 109 PKKHSFEKLREQAHLRVRTNTFGAIMRVRSKLSFAVHQYFNDNGFFYVNTPIVTGSDAEG 168

Query: 56  ETHI---------RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
              +             T+    D+      K   L  S +   +        K++ F  
Sbjct: 169 AGEMFKVTNLDLKDPPKTKDGEIDYSQDFFGKETNLTVSGQLEAETYAMG-LGKVYTFGP 227

Query: 103 AWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A    +  +    + I+   +   +   S      N 
Sbjct: 228 TFRAENSNTTRHLAEFWMIEPEVAFCDLKGNIDLAEDFIQQVLKYITEHCKSDLEFLENR 287

Query: 162 FSEPEYITVAEAFA--------RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
             E E     +  +         +   +    +   +  D        ++        + 
Sbjct: 288 LLEEEKSKPEKDRSPMPLREKIDFVLKNNFKRVSYTEAIDILRNSKPNKKKKFSYIIKEW 347

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
            +D+ S      +E +    C  ++  YPA   A       D +  +  ++    I    
Sbjct: 348 GADLQSEHERYLVEKH--FECPVVIYDYPADIKAFYMRLNDDGKTVRAMDVLFPGI---- 401

Query: 274 ACDELLDPIEQRHRFEKEM-QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
              E+    ++  R++  + + ++   +E       +L          SG  +GF+RLV+
Sbjct: 402 --GEIAGGSQREERYDVLLSKMREIGIDEKEL--WWYLDTRKFGTCVHSGFGLGFERLVL 457

Query: 332 LVTGANNINEVIWTPF 347
             TG +NI +VI  P 
Sbjct: 458 FATGMSNIRDVIPYPR 473


>gi|295101792|emb|CBK99337.1| Aspartyl/asparaginyl-tRNA synthetases [Faecalibacterium prausnitzii
           L2-6]
          Length = 444

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 51/323 (15%), Positives = 112/323 (34%), Gaps = 35/323 (10%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               ++   +++R++ +E  FIE  +  L  +  +E+    F       D+  +  YL  
Sbjct: 142 MFKAQSCFVNAMRQFLLERSFIETHTPKLI-AAASESGSEVFKV-----DYFDRNAYLAQ 195

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+F  +  +AAG E+IF     +R  +     H  EF+  +   ++ +  + +      
Sbjct: 196 SPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHSTEFSGFDLEFSYITSYKDVMKMEEE 255

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +  A   A ++ +  Q                E         +    D     +    Y 
Sbjct: 256 LLTAGLKAVKEQYGEQIKELFGL---------EVVVPTTPFPVVKLADLYKGLEEEFGYT 306

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
                 +  +     +    R+  + ++ + G      +  Y A + A  ++   +    
Sbjct: 307 ------VDESEKGDLTTEAERLSYDWVKKHYGHE-FLFITDYSAEKRAFYHMRDEN-GVP 358

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           + ++L    +E+                 +K+ +EK    +      + +L       P 
Sbjct: 359 QGYDLIWRGVEITTGAQREHRYDV----LKKQAEEKGLADDV-----KFYLEFFQYGCPP 409

Query: 319 SSGIAMGFDRLVMLVTGANNINE 341
             G  +G DRL ML+ G  +I +
Sbjct: 410 HGGFGLGIDRLTMLLCGQ-SIKD 431


>gi|148359826|ref|YP_001251033.1| asparaginyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296107873|ref|YP_003619574.1| asparaginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|259511569|sp|A5IE87|SYN_LEGPC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148281599|gb|ABQ55687.1| asparaginyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295649775|gb|ADG25622.1| asparaginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 467

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 110/357 (30%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R+ +  ++  ++ E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNTISAVTRVRHSLAQAIHRFYHEQGFFWVHTPIITASDCEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 LNIPKNDKGQIDFSKDFFGRETFLTVSGQLNVEAYCMAMS-KVYTFGPTFRAENSNTSRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + E + K   +++R       + +   +  + + F++       E 
Sbjct: 245 LAEFWMIEPEIAFANLEDICKLSQSMLRY----LCKTVLEERADDMDFFNQFVAPGCIER 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               A+ +        +           + +  +     +W           +   L   
Sbjct: 301 MEHIADSEF-------EMMTYTDAIKALEASDQKFEFPVSWGLDLQSEHERYLAEVLCKK 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP            D +             L     E++   ++  R E   +
Sbjct: 354 PV-IVTNYPQEIKGFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEILDR 406

Query: 294 EKKK--IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +  +  E Y    D           +G  +GF+RL+  VTG +N+ +VI  P +
Sbjct: 407 RMDECNLNKEHYQWYRDLRR--YGTVPHAGFGLGFERLISYVTGVSNVRDVIPFPRT 461


>gi|255284236|ref|ZP_05348791.1| asparagine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265189|gb|EET58394.1| asparagine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 463

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 103/358 (28%), Gaps = 47/358 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI------- 59
           H R R          R++   ++ ++F E  F+ + +  +  S      E          
Sbjct: 123 HLRPRTNMFQATFRVRSLTAYAIHKFFQERDFVYVHTPLITGSDCEGAGEMFQVTTLDLE 182

Query: 60  RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
               T     D+      K   L  S + + +    A    I+ F   +R        H 
Sbjct: 183 NPPKTADGKVDYTKDFFGKQTNLTVSGQLNGEMYAQA-FRNIYTFGPTFRAENSNTTRHA 241

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    +  M    ++++                    F+      + E  
Sbjct: 242 AEFWMIEPEIAFADLKDDMILAEDMLKYVIRYV----MENAPEELAFFNSFVDKGLMERL 297

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               N   G                  ++   +  +  +W           +        
Sbjct: 298 NSVVNSQFGHVTYTE-------AIEILEKNNDKFEYKVSWGCDLQTEHERYLTEQ-VFKR 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  YP    A       D +     +     I       +  D  E+  +   E+  
Sbjct: 350 PVFVTDYPKEIKAFYMKLNDDGKTVAAMDCLVPGIGEIIGGSQREDSYEKLLQRMHELGL 409

Query: 295 KKKIYNETYPIDEDFLACL----TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           K+          ED+ A L        + +G  +GF+R VM +TG +NI +VI  P +
Sbjct: 410 KE----------EDYRAYLDLRKYGSTRHAGFGLGFERCVMYLTGVSNIRDVIPFPRT 457


>gi|253755835|ref|YP_003028975.1| asparaginyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251818299|emb|CAZ56109.1| asparaginyl-tRNA synthetase [Streptococcus suis BM407]
          Length = 448

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 64/348 (18%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++      RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  +  YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGQLAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +               +   +AE F R A  D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRY-IAEPFKRVAYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            T L    + D+   Y                 D F       I    G+   T +  YP
Sbjct: 295 ITLLQ-EHEADKDTDYE-----------HIEHGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 341 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDNYDALVSKMDELGMD 395

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 396 KSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 442


>gi|119952903|ref|YP_945112.1| asparaginyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|119861674|gb|AAX17442.1| asparaginyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 461

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 107/356 (30%), Gaps = 41/356 (11%)

Query: 12  RDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
                R   F      RN I   + EYF +N F+ I +  +  +       I  F    +
Sbjct: 122 PHLRIRTNTFGAVARIRNQISYKIHEYFQKNGFLYIHTPIITSNDGEGAGEI--FRVSTL 179

Query: 68  IQD-------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
             +                K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 180 DFNNITNGKEVDFKDDFFGKQAFLTVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 238

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + E  +    N ++       ++  +  N +   F       + + 
Sbjct: 239 ASEFWMIEPEMAFFTLEDNINLAENFLKYIL----KETLNNCNQDIEFFDNFIEKGLIKK 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                         N +         Q + A         W           +   + I 
Sbjct: 295 IE-------DVINSNFEVITYTQAIKQLENATKTFEIKPYWGMDLQTEHERYLTEEI-IK 346

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE-QRHRFEKEM 292
              I+  YP    A       D +  K  ++    I       E  D ++    R ++  
Sbjct: 347 KPAIVIDYPKEFKAFYMKMNEDGKTVKGMDILVPRIGEIIGGSEREDNLDKLNKRIKELN 406

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E + +    + +D   L         SG  +G +RL+  +TG  NI +VI  P +
Sbjct: 407 LEIETLN---WYLD---LRRF-GSTPHSGFGLGLERLIQYITGMANIRDVIPFPRT 455


>gi|221505309|gb|EEE30963.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 763

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 101/334 (30%), Gaps = 31/334 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     ++      RE+ +   F+E+ S  L    S G  +             +  +  
Sbjct: 451 QAIFRIQSETLQLFREFLLSRNFVELHSPKLIGGASEGGAS--------CFTLKYFNRDA 502

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  + A  E++F     +R        H  EFT L+     + +   + D
Sbjct: 503 CLAQSPQLYKQMAMCADFERVFEIGPVFRAENSNTHRHLCEFTGLDLEMTFKEHYSEVLD 562

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +         +    +    +     E  T  E   R +  +    L     P+  
Sbjct: 563 LLDDLFKFIFKGLSERCKKEIDLFHQQHPAEPFTWIEETPRLSFEEGVQMLREAGCPNI- 621

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                          +   S    ++L   ++     +   +L              P +
Sbjct: 622 ----------PEDLSEFDLSTEQEKMLGRLVKEKYHTDFYMLLQYPLKVRPFYTMPDPHN 671

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
             ++  ++ +  N E+ +    + D      R  +              I + ++     
Sbjct: 672 KMYSNSYDFFMRNEEITSGAQRVHDADLLTQRCLEC-------GVPPSSI-QTYIDSFRL 723

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 G  +G +R+VML  GA NI +V   P  
Sbjct: 724 GTAPHGGAGIGLERVVMLFLGAKNIRQVSLFPRD 757


>gi|317485967|ref|ZP_07944822.1| asparaginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316922740|gb|EFV43971.1| asparaginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 460

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 107/357 (29%), Gaps = 45/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIR---AF 62
            H R R          R     ++ ++F +N F  + +  L  S      E         
Sbjct: 121 AHLRSRTNKYGAAFRIRAEAAHAVHDFFYQNGFYYVHTPILTGSDCEGAGEMFRVTTLPL 180

Query: 63  STELII-QDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
           +T +   ++   +  +     L  S +    + LA G  K++ F   +R        H  
Sbjct: 181 NTPVKPGENPYAQDFFGKECSLTVSGQLEA-EALALGLGKVYTFGPTFRAENSNTPRHAA 239

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A       M                +  +   +N       + + + + F 
Sbjct: 240 EFWMIEPEVAFTDINDNMDLA-------------ESLTCFVINRVLERRADDMDLFDRFV 286

Query: 176 RYANIDLGTTL--DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               +D    +      +          + +G    +   +           +       
Sbjct: 287 DKGLVDRLKGMVAQPFARCSYREAIDILKASGKNFEYPAKFGLDLQTEHERFLAEEH-FK 345

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
               +  YP    A       D       ++    I       EL+   ++  R +  E 
Sbjct: 346 RPVAVYDYPKEIKAFYMRQNDDRETVAAMDVLVPRI------GELIGGSQREERLDVLES 399

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + ++   +        +L          SG  MGF+RLVM++TG +NI + +  P +
Sbjct: 400 RIREMNQDPANY--WWYLDLRRFGSVPHSGFGMGFERLVMMLTGISNIRDALPFPRT 454


>gi|57650409|ref|YP_186338.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           COL]
 gi|87161603|ref|YP_494042.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195188|ref|YP_499989.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|151221577|ref|YP_001332399.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161509622|ref|YP_001575281.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221140979|ref|ZP_03565472.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|258451112|ref|ZP_05699147.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|262048980|ref|ZP_06021859.1| asparaginyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051626|ref|ZP_06023846.1| asparaginyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|282916721|ref|ZP_06324479.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282921700|ref|ZP_06329417.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|283770527|ref|ZP_06343419.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           H19]
 gi|284024453|ref|ZP_06378851.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           132]
 gi|294848418|ref|ZP_06789164.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|81694480|sp|Q5HFW9|SYN_STAAC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123291797|sp|Q2FYH6|SYN_STAA8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|123722388|sp|Q2FGY6|SYN_STAA3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|172048886|sp|A6QH05|SYN_STAAE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083484|sp|A8Z434|SYN_STAAT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|57284595|gb|AAW36689.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           COL]
 gi|87127577|gb|ABD22091.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202746|gb|ABD30556.1| asparaginyl-tRNA synthetase,putative [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|150374377|dbj|BAF67637.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160368431|gb|ABX29402.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257861167|gb|EEV83980.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|259160467|gb|EEW45491.1| asparaginyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162912|gb|EEW47475.1| asparaginyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|269940947|emb|CBI49331.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282319208|gb|EFB49560.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282593962|gb|EFB98951.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|283460674|gb|EFC07764.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           H19]
 gi|283470667|emb|CAQ49878.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
 gi|294824444|gb|EFG40867.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|302333065|gb|ADL23258.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302751285|gb|ADL65462.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|315197800|gb|EFU28134.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|329314131|gb|AEB88544.1| Asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329723218|gb|EGG59749.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 430

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F ++ F ++D   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +    D
Sbjct: 224 GEMAFTNHAESLEIQEQYVTHVVKSVLENC--------------------KLELKILERD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 264 TSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P +       +L A          E++   E+    E  ++  ++  +
Sbjct: 322 PTKIKPFYMQPNPENEETVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D            G  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEEAYSYYLDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 424


>gi|329731349|gb|EGG67715.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 430

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 106/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F ++ F ++D   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +    D
Sbjct: 224 GEMAFTNHAESLEIQEQYVTHVVKSVLENC--------------------KLELKILERD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 264 TSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P + +     +L A          E++   E+    E  ++  ++  +
Sbjct: 322 PTKIKPFYMQPNPENEKTVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D            G  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEEAYSYYLDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 424


>gi|308186276|ref|YP_003930407.1| asparaginyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056786|gb|ADO08958.1| asparaginyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 466

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +   +A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFSEDFFGKEAFLTVSGQLNGETYASA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  S +        +++       ++    +  +   F+E       E 
Sbjct: 244 LAEFWMLEPEIAFASLDDAAALAEAMLKYVFNAVLEE----RADDMAFFAERVDKDAVER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D           G    +  +W    S      +       
Sbjct: 300 LQRFITTDFAQV-------DYTDAVEILMNCGQTFENPVSWGIDLSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R E+  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLEEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|331701435|ref|YP_004398394.1| asparaginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128778|gb|AEB73331.1| Asparaginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 431

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 109/350 (31%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R    +  RN +  +  ++F +  FI+ID+  L   +P         
Sbjct: 115 MDHRHLWLRSS--RPHAVMRIRNEVIKATYDFFNDEGFIKIDAPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T L   ++  +  YL  S +   ++  A    K+F F   +R  +     H  EF M+E
Sbjct: 166 TTTLFHTEYFDRDAYLSQSGQLY-EEAGAEAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     I        +                      +   +    D
Sbjct: 225 PEMAFMHQEESLEIQERYIAYLVTRVLENC--------------------QMELKTLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                     P   + Y +A     +   D  W   F       +      N    +  Y
Sbjct: 265 PEVLKKYTVLPYPRISYDEAITMLKKGGFDLEWGVDFGSPEETYLADQ--FNQPVFVINY 322

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKKIY 299
           P             P  T+   +   ++       E++   E+   ++   +   K  + 
Sbjct: 323 PKAIKPFYM----KPHPTRDDVVICADLLAPEGYGEIIGGSERATDYDYLYDQIVKAGLD 378

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + Y     +L          SG  +G +R +  +TG +++ E I  P  
Sbjct: 379 PKEY---SWYLDLRKYGSVPHSGFGLGLERALTWLTGEDHVREAIPFPRL 425


>gi|15924444|ref|NP_371978.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927035|ref|NP_374568.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|148267940|ref|YP_001246883.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150394003|ref|YP_001316678.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156979773|ref|YP_001442032.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315963|ref|ZP_04839176.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|255006241|ref|ZP_05144842.2| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795490|ref|ZP_05644469.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258413299|ref|ZP_05681575.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420594|ref|ZP_05683536.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258426790|ref|ZP_05688010.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444788|ref|ZP_05693117.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258447378|ref|ZP_05695522.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258449737|ref|ZP_05697838.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258454594|ref|ZP_05702558.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|269203079|ref|YP_003282348.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892950|ref|ZP_06301185.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282927981|ref|ZP_06335590.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|295407204|ref|ZP_06817004.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296275348|ref|ZP_06857855.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297244628|ref|ZP_06928511.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|54039683|sp|P67572|SYN_STAAN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|54042044|sp|P67571|SYN_STAAM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166232738|sp|A7X2E9|SYN_STAA1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083482|sp|A6U1S3|SYN_STAA2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083483|sp|A5ISY4|SYN_STAA9 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|13701252|dbj|BAB42547.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247225|dbj|BAB57616.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147741009|gb|ABQ49307.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149946455|gb|ABR52391.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156721908|dbj|BAF78325.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|257789462|gb|EEV27802.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839863|gb|EEV64331.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843542|gb|EEV67949.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257849951|gb|EEV73909.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850281|gb|EEV74234.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257853569|gb|EEV76528.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257856985|gb|EEV79885.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257862977|gb|EEV85741.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262075369|gb|ACY11342.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282590278|gb|EFB95358.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282764947|gb|EFC05072.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285817134|gb|ADC37621.1| Asparaginyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294967917|gb|EFG43946.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297178658|gb|EFH37904.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|312829846|emb|CBX34688.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315129169|gb|EFT85164.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329727061|gb|EGG63517.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 430

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F ++ F ++D   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +    D
Sbjct: 224 GEMAFTNHAESLEIQEQYVTHVVKSVLENC--------------------KLELKILERD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 264 TSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P +       +L A          E++   E+    E  ++  ++  +
Sbjct: 322 PTKIKPFYMQPNPENEETVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D            G  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEEAYSYYLDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 424


>gi|229011492|ref|ZP_04168680.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228749783|gb|EEL99620.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 437

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 112/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 129 RHERIAAVFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 182

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 183 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 242

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 243 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 282

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN- 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 283 TLAEAQEILKMKYRKESPEGDLDTEG-EKLLGKYVKETYNSE-FVFITHYPKEARPMYTI 340

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 341 PNKENPTITDSFDLLYKGLEITSGAQRIHNYDMLLASFKE-----KGLHPEKFQ---SYL 392

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 393 NTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 431


>gi|229190299|ref|ZP_04317300.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228593083|gb|EEK50901.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 432

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPIITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKEIYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNKENPSITDSFDLLYKGLEITSGAQRIHNYEMLLASF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 426


>gi|229496474|ref|ZP_04390189.1| asparaginyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316614|gb|EEN82532.1| asparaginyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 465

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 105/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            + R R       L  R+ +  ++ E+F +  +  + +  +  S       +  F    +
Sbjct: 121 AYLRPRTNTFGAILRIRHNMAIAIHEFFHKKGYYYVHTPIITSSDAEGAGQM--FRVTTL 178

Query: 68  IQDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             D +           K  +     L  S +   +    A    I+ F   +R       
Sbjct: 179 NLDKLPLNKAGEVDYKKDFFGKPTALTVSGQLEGELAALA-LGGIYTFGPTFRAENSNTP 237

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M       +   + A              F +       
Sbjct: 238 RHLAEFWMIEPEIAFFDVHDNMDLAEEFTKHCVQWALDNCADDLAFLSEHFDK------- 290

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
                     L  + +         +  +A   G +      W    +      +     
Sbjct: 291 -GLMDRLRFVLANSYERITYTQGIEILEKAIAEGHKFEFPVYWGVDLASEHERYLVEQH- 348

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                I+  YP    A       D +  +  ++    I       E++   E+   F+K 
Sbjct: 349 FQKPVIMTDYPKEIKAFYMKQNEDGKTVRGMDVLFPLI------GEIIGGSEREADFDKL 402

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +++      I   +L          +G  +GF+RL++ VTG +NI +VI  P +
Sbjct: 403 RTHAQEMGVPEKDI-WWYLDTRRFGTVPHAGFGLGFERLLLFVTGMSNIRDVIPFPRT 459


>gi|228907946|ref|ZP_04071797.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL
           200]
 gi|228851705|gb|EEM96508.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL
           200]
          Length = 428

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 113/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++    S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 120 RHERTAAIFKVKSTFVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 173

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 174 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 233

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   ++++   +   +K                     +   +   I++    + P  
Sbjct: 234 VMQLETDVLQYMFQQVAKKC--------------------DKELQLLQIEVPVITEIPKI 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
           P      +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 274 PLLEAQEILKNKYRKESPVGDLDTEG-EKLLGKYVKEIYNSE-FVFITHYPKEARPMYTM 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 332 PNKENPSITDSFDLLYKGLEITSGAQRIHNYEMLLASFKE-----KGLHPEKFQ---SYL 383

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 384 NTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 422


>gi|237836481|ref|XP_002367538.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211965202|gb|EEB00398.1| aspartyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 773

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 48/332 (14%), Positives = 101/332 (30%), Gaps = 27/332 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++      RE+ +   F+E+ S  L    G  +   A         +  +   L
Sbjct: 461 QAIFRIQSETLQLFREFLLSRNFVELHSPKLI---GGASEGGAS---CFTLKYFNRDACL 514

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   +  + A  E++F     +R        H  EFT L+     + +   + D +
Sbjct: 515 AQSPQLYKQMAMCADFERVFEIGPVFRAENSNTHRHLCEFTGLDLEMTFKEHYSEVLDLL 574

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +         +    +    +     E  T  E   R +  +    L     P+    
Sbjct: 575 DDLFKFIFKGLSERCKKEIDLFHQQHPAEPFTWIEETPRLSFEEGVQMLREAGCPNI--- 631

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
                        +   S    ++L   ++     +   +L              P +  
Sbjct: 632 --------PEDLSEFDLSTEQEKMLGRLVKEKYHTDFYMLLQYPLKVRPFYTMPDPHNKM 683

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
           ++  ++ +  N E+ +    + D      R  +              I + ++       
Sbjct: 684 YSNSYDFFMRNEEITSGAQRVHDADLLTQRCLEC-------GVPPSSI-QTYIDSFRLGT 735

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               G  +G +R+VML  GA NI +V   P  
Sbjct: 736 APHGGAGIGLERVVMLFLGAKNIRQVSLFPRD 767


>gi|253732096|ref|ZP_04866261.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733299|ref|ZP_04867464.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304380964|ref|ZP_07363622.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|253724143|gb|EES92872.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728839|gb|EES97568.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304340489|gb|EFM06425.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320142699|gb|EFW34502.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
          Length = 432

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F ++ F ++D   L   +P   + +  F
Sbjct: 116 MDHRHLWLRSK--KQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSEL--F 171

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 172 HTK-----YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +    D
Sbjct: 226 GEMAFTNHAESLEIQEQYVTHVVKSVLENC--------------------KLELKILERD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 266 TSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 323

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P +       +L A          E++   E+    E  ++  ++  +
Sbjct: 324 PTKIKPFYMQPNPENEETVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGL 378

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D            G  +G +R V  ++G  ++ E    P  
Sbjct: 379 DEEAYSYYLDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 426


>gi|320140374|gb|EFW32230.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
          Length = 432

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F ++ F ++D   L   +P   + +  F
Sbjct: 116 MDHRHLWLRSK--KQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSEL--F 171

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 172 HTK-----YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +    D
Sbjct: 226 GEMAFTNHAESLEIQEQYVTHIVKSVLENC--------------------KLELKILERD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 266 TSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 323

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P +       +L A          E++   E+    E  ++  ++  +
Sbjct: 324 PTKIKPFYMQPNPENEETVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGL 378

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D            G  +G +R V  ++G  ++ E    P  
Sbjct: 379 DEEAYSYYLDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 426


>gi|21283073|ref|NP_646161.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|24212397|sp|Q8NWP3|SYN_STAAW RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21204513|dbj|BAB95209.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MW2]
          Length = 430

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F ++ F ++D   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +    D
Sbjct: 224 GEMAFTNHAESLEIQEQYVTHVVKSVLENC--------------------KLELKILERD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 264 TSKLEKVATPFPRISYDDAIEFLKSEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P +       +L A          E++   E+    E  ++  ++  +
Sbjct: 322 PTKIKPFYMQPNPENEETVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D            G  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEEAYSYYLDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 424


>gi|13507785|ref|NP_109734.1| aspartyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2500968|sp|P75068|SYD_MYCPN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|1673765|gb|AAB95756.1| aspartyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|301633248|gb|ADK86802.1| aspartate--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 557

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/428 (15%), Positives = 124/428 (28%), Gaps = 107/428 (25%)

Query: 11  NRDFHYR------RRPFLLKR----NMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
             +   R      RRP + KR    + +  ++R +  +  FIE+++ +L   +P      
Sbjct: 114 LEEVRLRYRYLDLRRPVMQKRLALRHKVTLAVRNWLDQMGFIEVETPTLTKSTPEG---A 170

Query: 60  RAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           R F     I++H     Y L  SP+   + L+  G EK F  AH +R+ +     QPE T
Sbjct: 171 RDFLVPARIREH---SFYALPQSPQIYKQLLMVGGTEKYFQIAHVYRDEDSRKDRQPEHT 227

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   A  + E +M     +                                +   RY 
Sbjct: 228 QIDLEVAFYTKEMVMDLIQRLFVDVFRQVLNIKLKKPFPVLKFAEAFNRFGSDKPDLRYG 287

Query: 179 N--IDLGTTLDNP------------------------DQPDRHLLYLQAQQAGI------ 206
               D      +                         D+     L   A+  G+      
Sbjct: 288 FELEDCTDLFQDSPNQFTNLINAGGIVGGIQLPNLYLDEVSFKALRKLAKDNGVSLEFYS 347

Query: 207 -------------------------RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                                    +         I + +                +  +
Sbjct: 348 DKASSLKQPLDLPLAGTILLVAHKSKTQAWTALGAIRNELKYHLNLVKPNQYSFCWIVDF 407

Query: 242 P---------APESALANIYPADPRF------------TKRFELYACNIELCNACDELLD 280
           P            SA        P++            +++++L     EL +    + D
Sbjct: 408 PLYEFDEKEQKWVSAHNMFSNPQPQWLVNFENHKAEALSEQYDLVLNGFELGSGSIRIHD 467

Query: 281 PIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANN 338
           P  Q    +    + ++     E Y             P  +G+ +G DRL+M++   +N
Sbjct: 468 PEVQTRLMQSLGVDPQQFGFVMEAYQ---------YGAPVHAGMGLGLDRLMMIINNVDN 518

Query: 339 INEVIWTP 346
           I EV+  P
Sbjct: 519 IREVMAFP 526


>gi|325473432|gb|EGC76627.1| asparaginyl-tRNA synthetase [Treponema denticola F0402]
          Length = 473

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 112/365 (30%), Gaps = 53/365 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNET-HIRAFST 64
            H R R          R+ +  ++  +F E  F  + +  +  S      E  H+  F  
Sbjct: 124 AHLRARTNTFGAVARIRSQMAYAIHTFFQERGFQYVHTPIITGSDCEGAGEMFHVTTFDI 183

Query: 65  ELIIQDHI-------------RKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
           E  ++  +              +  +     L  S +   +    A   +I+ F   +R 
Sbjct: 184 EETVKKALKEKKDPDSFKIDYSQDFFGKQANLTVSGQLEGETYATA-LSRIYTFGPTFRA 242

Query: 107 GEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
                  H  EF M+E   +  + ++ M+     I    + A +K               
Sbjct: 243 ENSNTSRHLAEFWMVEPEMSFFTIKENMELAEEFIVYLLKWALEKCR------------- 289

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ--QAGIRVAHDDTWSDIFSRILI 223
           E +   ++  +   I++   + N            A+  +   R      W         
Sbjct: 290 EDLEFFDSRIKKGLIEMLKNVVNTPFTRLTYTEAIAELEKHIDRFEFKPYWGCDLQSEHE 349

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             +   +      I+  YP    +       D +  +  ++    +       E  + ++
Sbjct: 350 RFLTEEVYKGPV-IVTNYPKEIKSFYMKLNEDGKTVRAMDVLVPGLGEIIGGSEREENLD 408

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
                  + + K+    E       +L          SG  +GF+RL++ VTG  NI +V
Sbjct: 409 IL-----QGRIKELGLREEDY--WWYLDLRRYGTVPHSGFGLGFERLLLYVTGMGNIRDV 461

Query: 343 IWTPF 347
           I  P 
Sbjct: 462 IPFPR 466


>gi|313114650|ref|ZP_07800156.1| asparaginyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623014|gb|EFQ06463.1| asparaginyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 462

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 55/369 (14%), Positives = 110/369 (29%), Gaps = 50/369 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE 56
           +  +P+          R   F      R+    ++ ++F EN F+   S  L  S     
Sbjct: 119 LRTMPT-------LRPRTNTFNAAFRVRSAAAYAIHKFFQENGFVYSHSPLLTSSDCEGA 171

Query: 57  THIRAFSTELII---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
             +  F    +                QD   KP+ L  S +    + +A    K++ F 
Sbjct: 172 GEM--FRVTTLDLENVPKNEDGTVDYTQDFFEKPVNLTVSGQLEA-EAMAMAFGKVYTFG 228

Query: 102 HAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
             +R  +     H  EF M+E   A       M     + +                   
Sbjct: 229 PTFRAEKSFTTRHAAEFWMIEPEMAFCDLSGYMDTAEAMTKYVIRYV----LDNCPDEMA 284

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
            F++     + E     AN + G                  ++   +      W      
Sbjct: 285 FFNQFIDKGLIERLELVANCEFGRISYTE-------AIEILKKNNKKFQFPVEWGVDIQT 337

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
                +   +       +  YP    +       D +     ++    I       EL+ 
Sbjct: 338 EHERYLTE-VVFKKPVFVTDYPKEIKSFYMKQNPDGKTVAAADMLVPGI------GELIG 390

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNI 339
             ++   ++K +    ++  +    D    L       + +G  +GF+R++M +TG  NI
Sbjct: 391 GSQREENYDKLVARMDELGMDKTNYDWYLNLRKFGG-VEHAGYGLGFERMIMYLTGIQNI 449

Query: 340 NEVIWTPFS 348
            +V+  P +
Sbjct: 450 RDVLPFPRT 458


>gi|217077430|ref|YP_002335148.1| asparaginyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037285|gb|ACJ75807.1| asparaginyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 431

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 117/346 (33%), Gaps = 40/346 (11%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
            +  W R    R+   L  R+ +  ++R+++ EN F+++D+         E+    F  +
Sbjct: 117 HRHLWLRSR--RQMHILNIRDAVLRAIRKFYWENDFVQVDTPIFTG-AIGESAGNLFEID 173

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
                     +YL  + +   +    A   ++F     +R  +     H  EF M E   
Sbjct: 174 YFDYG----KVYLAQTGQLYLEAACMA-LGRVFNLGPTFRAEKSKTRRHLIEFWMNEAEV 228

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A+  +E  +K   N++    +   +             S+ E I                
Sbjct: 229 AYFEHEDNLKLQENLVSYIVKYVLENAREHLEALNRDISKLEKI---------------- 272

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-A 243
                + P   + Y +A +   +  +D  W D F      +I      +    +  YP  
Sbjct: 273 -----EPPFPRITYTEAVKMLQKKGYDIEWGDDFGGDEETEIAKQ--FDKPVFVTHYPRK 325

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
            ++      P +P      +L A          E++   ++ H ++  ++  K+      
Sbjct: 326 AKAFYMQPDPDNPDVVLCDDLIAP-----EGYGEIIGASQRIHDYDLLVERLKEFNLPVE 380

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             D  +L          SG  +G +R +  + G  +I E I  P +
Sbjct: 381 SYDW-YLDLRKFGSVPHSGFGLGVERTIAWIAGLEHIREAIPFPRT 425


>gi|49486294|ref|YP_043515.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|59798533|sp|Q6G9A8|SYN_STAAS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49244737|emb|CAG43173.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
          Length = 430

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F ++ F ++D   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +    D
Sbjct: 224 GEMAFINHAESLEIQEQYVTHVVKSVLENC--------------------KLELKILERD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 264 TSKLEKVATPFPRISYDDAIEFLKSEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P +       +L A          E++   E+    E  ++  ++  +
Sbjct: 322 PTKIKPFYMQPNPENEETVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D            G  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEEAYSYYLDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 424


>gi|239996520|ref|ZP_04717044.1| asparaginyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 465

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 59/356 (16%), Positives = 108/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       RN +  ++  +F E  +  I +  L  S       +   ST   
Sbjct: 124 AHLRPRTNVIGAVTRVRNCLSQAIHRFFHEKGYFWISTPILTASDTEGAGEMFRVSTLDM 183

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  YL  S + + +    A   K++ F   +R        H
Sbjct: 184 MNLPRDDKGNVDYSEDFFGKETYLTVSGQLNVETYCTAMS-KVYTFGPTFRAENSNTSRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + + +   ++++   +   +++      +   F++       E 
Sbjct: 243 LAEFWMIEPEVAFAELKDVAQLAEDMLKYVCKAVLEEL----PDDMAFFAQRIKKDAIER 298

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             +  + D         + D        Q  G        W    S      +       
Sbjct: 299 LEKLVSSDFV-------RMDYTDAIEILQNCGKEFEFPVEWGIDLSSEHERYLAEEHVGA 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R ++  
Sbjct: 352 PIIMQ-NYPKDIKAFYMRINDDGKTVAAMDVLAPGIGEIIGGSQREERLDVFDARLDEMG 410

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+   +  +  D             SG  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 411 LSKE---DYAWYRDLR----RYGTVPHSGFGLGFERLVAYVTGMQNVRDVIPFPRT 459


>gi|189463705|ref|ZP_03012490.1| hypothetical protein BACINT_00038 [Bacteroides intestinalis DSM
           17393]
 gi|189438655|gb|EDV07640.1| hypothetical protein BACINT_00038 [Bacteroides intestinalis DSM
           17393]
          Length = 467

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 106/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++  +F +  F+   +  +  S       +   +T+  
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHTFFHQKGFVYFHTPIITASDCEGAGQMFQVTTKNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDEAGSIIYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A            + F +         
Sbjct: 242 LAEFWMVEPEVAFNDITDNMDLAEEFIKFCVKWALDNCADDVKFLNDMFDK--------G 293

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
                   L  +       D   +  +A   G +      W  D+ S      +E +   
Sbjct: 294 LIERLQSVLKESFVRLSYTDGIKILEEAVAKGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYNKLLTRIDEM 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 461


>gi|310642513|ref|YP_003947271.1| asparaginyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309247463|gb|ADO57030.1| Asparaginyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 431

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 64/349 (18%), Positives = 114/349 (32%), Gaps = 43/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++R  L+ R  I  +++E+F  N F ++D   L  S    T      
Sbjct: 116 MDHRHLWLRSA--KQRAVLIIRAEIIRAIQEFFNGNGFTKVDPPILTPSSAEGT------ 167

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL    +  +  YL  S +    +  A    K++ F   +R  +     H  EF M+E 
Sbjct: 168 TELFHIKYFDEDAYLTQSGQLYM-EAAAMALGKVYSFGPTFRAEKSKTRRHLIEFWMIEP 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A   +E+ ++     +    +   +             S+ E I        Y     
Sbjct: 227 EMAFVDHEESLRVQEQFVSHIVQSVLKNCAKELEAIGRDVSKLEQIQGEFPRITY----- 281

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                     D  + +LQ +   I       W + F       I      N    +  +P
Sbjct: 282 ----------DEAIAFLQGEGFDIP------WGEDFGAPHETAIAERY--NKPVFITHWP 323

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
               +      PA P      ++ A     E+      + DP     RF +    ++   
Sbjct: 324 THIKAFYMKPDPARPEVVLCADMIAPEGYGEIIGGSQRIDDPALMEERFNEHNLAREA-- 381

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              + +D   L         SG  +G +R V  + G +++ E I  P  
Sbjct: 382 -YQWYMD---LRT-YGSVPHSGFGLGLERTVAWICGLDHVRETIPFPRM 425


>gi|323439543|gb|EGA97264.1| asparaginyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442218|gb|EGA99849.1| asparaginyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 432

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F ++ F ++D   L   +P   + +  F
Sbjct: 116 MDHRHLWLRSK--KQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSEL--F 171

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 172 HTK-----YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +    D
Sbjct: 226 GEMAFTNHAESLEIQEQYVTHVVKSVLENC--------------------KLELKILERD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 266 TSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 323

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P +       +L A          E++   E+    E  ++  ++  +
Sbjct: 324 PTKIKPFYMQPNPENEETVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGL 378

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D            G  +G +R V  ++G  ++ E    P  
Sbjct: 379 DEEAYSYYLDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 426


>gi|327350292|gb|EGE79149.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 971

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 110/334 (32%), Gaps = 34/334 (10%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ + +  R       FIEI +  LQ S   E+    F  +     +  +  +
Sbjct: 301 SQSIFRIQSAVSNLFRSSLDAQGFIEIHTPKLQSSA-TESGASVFEVK-----YFTREAF 354

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 355 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEALEI 414

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           +  +          E +   +        +    L+         
Sbjct: 415 VDSVLKEIFKGIYGRYRREVNIIKNQFPHEDLVWLDETPIIPFTEGIKLLNESGW----- 469

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
                ++ G  +  ++         L E I+     +   ILD++P        +  P +
Sbjct: 470 -----RRDGEELPINEDLGTRDEIRLGELIKEKYHTD-YFILDKFPKAARPFYAMEDPEN 523

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           P FT  F+++    E+ +    + D      R       K    N      E++   +  
Sbjct: 524 PDFTNSFDIFVRGQEIVSGGQRIHDEKILEKR------MKDVGINPATM--EEY---MEG 572

Query: 316 ----MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                P  +G  +G +RL+ML+    NI      
Sbjct: 573 FRWAAPPHAGAGIGLERLIMLILKLGNIRLASLF 606


>gi|297207886|ref|ZP_06924319.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300911971|ref|ZP_07129414.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|296887460|gb|EFH26360.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300886217|gb|EFK81419.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 432

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F ++ F ++D   L   +P   + +  F
Sbjct: 116 MDHRHLWLRSK--KQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSEL--F 171

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 172 HTK-----YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +    D
Sbjct: 226 GEMAFTNHAESLEIQEQYVTHVVKSVLENC--------------------KLELKILERD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 266 TSKLEKVATPFPRISYDDAIEFLKSEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 323

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P +       +L A          E++   E+    E  ++  ++  +
Sbjct: 324 PTKIKPFYMQPNPENEETVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGL 378

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D            G  +G +R V  ++G  ++ E    P  
Sbjct: 379 DEEAYSYYLDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 426


>gi|317131339|ref|YP_004090653.1| asparaginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469318|gb|ADU25922.1| asparaginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 466

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 54/369 (14%), Positives = 110/369 (29%), Gaps = 50/369 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PG 54
           +  +P         H R R          R+    ++  +F  + F  I +  +  S   
Sbjct: 121 LRTMP---------HLRPRANTLGAAFRIRSTAALAIHRFFHTHGFQYIHTPIITASDAE 171

Query: 55  NETH---------IRAFSTEL----IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
                             T        +D   +P+ L  S +    + +A    KI+ F 
Sbjct: 172 GAGEMFRLTVLDIADPPRTPDGAVDFSKDFFGRPVSLTVSGQL-EGESMALAFGKIYTFG 230

Query: 102 HAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
             +R        H  EF M+E   A    +       ++++   +    +          
Sbjct: 231 PTFRAENSNTTRHAAEFWMVEPEIAFADLDDDRALARDMMQAVLKTVLDECPD------- 283

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
              E  ++         A ++   T D         + L  ++   R ++  +W      
Sbjct: 284 ---ELAFLNQYVDKGLLARLEHVATSDFACVTYTEAVKLLEKE-NARFSYPVSWGCDLQT 339

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
                +   +      ++  YP    A       D +     +L    I       E++ 
Sbjct: 340 EHERYLTEEIFKAPVFVV-DYPKEIKAFYMRQNGDGKTVAAMDLLVPGI------GEIIG 392

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNI 339
             ++  R    +   +++            L         +G  +GF+RLVM +TG  NI
Sbjct: 393 GSQREERETVLLTRMEELGMPIEAYRWYLDLRRFGGAR-HAGFGLGFERLVMYLTGIGNI 451

Query: 340 NEVIWTPFS 348
            +V+  P +
Sbjct: 452 RDVLPFPRT 460


>gi|227538436|ref|ZP_03968485.1| asparagine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241718|gb|EEI91733.1| asparagine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 481

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 112/364 (30%), Gaps = 35/364 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          RN +  ++  +F E  F+ + +  +  S       +        
Sbjct: 118 AHLRFRTGTFNAIFKVRNALSFAVHRFFNERDFVYMHTPIITGSDAEGAGEMFRVTTLDL 177

Query: 60  -RAFSTE----LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                TE       +D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 178 NNPPRTENGEIDFKEDFFGKSTNLTVSGQLEGELAALA-FGNIYTFGPTFRAENSNTTRH 236

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M     +++     A +          N   E E    A  
Sbjct: 237 LAEFWMIEPEMAFYELEDNMDLAEALLKYVIRYALETCPEEIEFLKNRLLEEEKNKPAAD 296

Query: 174 FA--------RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            +        ++   +    +   D  +        Q+   +   D+  +D+ S      
Sbjct: 297 RSDMDLIEKLKFCLENEFERVKYTDAIEILKRSKPNQKKQFKYLIDEWGADLQSEHERYL 356

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +E +       IL  YP    +       +   T           L     E++   ++ 
Sbjct: 357 VEKH--FKKPVILTDYPREIKSFYMK--QNEPDTLGRNTVRAMDILFPGIGEMVGGSQRE 412

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
              +K +    ++      + E FL          SG  +GF+RLV+ VTG  NI +VI 
Sbjct: 413 ENLDKLLARMAEVGIPAEEM-EWFLDTRRFGSVPHSGFGVGFERLVLFVTGMTNIRDVIP 471

Query: 345 TPFS 348
            P +
Sbjct: 472 FPRT 475


>gi|298694745|gb|ADI97967.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 430

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F ++ F ++D   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEVIRATYEFFSKDGFTKVDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +    D
Sbjct: 224 GEMAFTNHAESLEIQEQYVTHVVKSVLENC--------------------KLELKILERD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 264 TSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P +       +L A          E++   E+    E  ++  ++  +
Sbjct: 322 PTKIKPFYMQPNPENEETVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D            G  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEEAYSYYLDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 424


>gi|224025132|ref|ZP_03643498.1| hypothetical protein BACCOPRO_01866 [Bacteroides coprophilus DSM
           18228]
 gi|224018368|gb|EEF76366.1| hypothetical protein BACCOPRO_01866 [Bacteroides coprophilus DSM
           18228]
          Length = 467

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 107/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHERGFFYFHTPLITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIIYDNDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A    +       + F +         
Sbjct: 242 LAEFWMIEPEVAFNDINDNMDLAEEFIKYCVQWALDNCYDDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +     +  P      +L   A   G +      W  D+ S      +E +   
Sbjct: 295 IERLQGVLKEEFVRLPYTEGIKIL-EDAVAHGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLLTRIQEL 411

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKYGSCPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 461


>gi|86159150|ref|YP_465935.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775661|gb|ABC82498.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 434

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/345 (17%), Positives = 113/345 (32%), Gaps = 39/345 (11%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W R    R++  L  R+ ++ ++R++F +  F  +D+     +    T     ST  
Sbjct: 120 RHLWLRS--QRQQVILRVRHTVEKAIRDFFDQRGFTLVDAPIFTPAACEGT-----STLF 172

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
            +        YL  S +    +  A    K++CF   +R  +     H  EF M+E   A
Sbjct: 173 EVPYFDLGKAYLTQSGQLYM-EAAAMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVA 231

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               +  M+     +    + A +K               E  TV E           + 
Sbjct: 232 FMDLDGDMELMEQFVSYVVQTALEKH------------RAELATVLERDV--------SK 271

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           L+N   P   + Y +A +   +  H   W D         +      +   ++ RYPA  
Sbjct: 272 LENVKAPFPRITYTEAVEVIQKAGHPMKWGDDIGGDEETVVAKQ--FDRPVMVHRYPAEM 329

Query: 246 -SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            +      PADP+             L       +    QR      ++   + +     
Sbjct: 330 KAFYFKKDPADPKVA------LGCDVLAPEGYGEIIGGGQREDDLATLEAAIEHHQLPKQ 383

Query: 305 IDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E +L          +G  MG +R V  + G +++ E I     
Sbjct: 384 AFEWYLDLRRYGTVPHAGFGMGVERCVAWICGLHHVRETIPFARM 428


>gi|15673810|ref|NP_267985.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|20139920|sp|Q9CEK9|SYN_LACLA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|12724857|gb|AAK05926.1|AE006413_2 asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 447

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 58/348 (16%), Positives = 115/348 (33%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    R+   +  RN I  +  ++F +N FI+ DS  L    GN       +
Sbjct: 124 LDNRHLWLRSK--RQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILS---GNAAEN---T 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+     +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGNSAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                ++++ +      ++   +       +   +              +   +  + D 
Sbjct: 235 EYPFVTHDESLDIQEAYVKALIQGVLDN--AAYALETLERDTSMLQKYIDTPFKRVSYDA 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I    G+   T +  YP
Sbjct: 293 AIDLLQAHENDEDTDYEHVE-----------HGDDFGSPHETWISNYYGV--PTFIVNYP 339

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++   E+   ++  +++      +
Sbjct: 340 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSERETDYDLLLKKIADFGLD 394

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L          +G  +G +R+V  V G  +I E I  P  
Sbjct: 395 PKDYDW-YLELRKFGSVPHAGFGLGLERMVTFVAGTEHIREAIPFPRM 441


>gi|304397090|ref|ZP_07378969.1| asparaginyl-tRNA synthetase [Pantoea sp. aB]
 gi|304355239|gb|EFM19607.1| asparaginyl-tRNA synthetase [Pantoea sp. aB]
          Length = 466

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 108/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +   +A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDFSEDFFGKEAFLTVSGQLNGETYASA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  + +       ++++       ++    +  +   F+E       E 
Sbjct: 244 LAEFWMLEPEIAFATLDDAAALAESMLKYVFNAVLEE----RADDMAFFAERVDKEAVER 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D           G    +  +W    S      +       
Sbjct: 300 LQRFITTDFAQV-------DYTDAVEILMNCGQTFENPVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R E+  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLEEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|15896232|ref|NP_349581.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|15026034|gb|AAK80921.1|AE007794_13 Aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510387|gb|ADZ22023.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 430

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 62/332 (18%), Positives = 107/332 (32%), Gaps = 38/332 (11%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
                +  I    R++   N F E+ +   L       + +  F+      ++     +L
Sbjct: 128 AVFKIQEEIGECFRKFLKLNNFTEVHTPKILASGTEGGSEL--FTV-----NYFDHRAFL 180

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+F  + ++  G EK+F   HA+R        H  E+  L+        E  + D  
Sbjct: 181 AQSPQFYKQMMVGVGFEKVFEVGHAYRAELHNTYRHLNEYVSLDAEMGFIEDENEIMDLE 240

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
                                 N   E    T A     Y NI L   +  P  P     
Sbjct: 241 EGF------------------INYLFENLRETCARELKMY-NITLPEKVSIPRIPLSEAQ 281

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
            +   + G R    D  ++   R+  + ++     +    L +YP  +  +         
Sbjct: 282 QIVFDKYGKRSPKGDLNAEG-ERLFSKYVKEKYDSD-FVYLTKYPLSKRPMYTMPDDEIE 339

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM 316
             +K F+L    +E+      + D         + ++ K     E     E+F      M
Sbjct: 340 GASKSFDLIYKGLEITTGGQRIHDHDM----LVEAIKNKGFKAEEFEFYTENF---RYGM 392

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           P   G A+G +RL M + G  NI E    P  
Sbjct: 393 PPHGGFAIGLERLTMQILGLENIREASLLPRD 424


>gi|326407318|gb|ADZ64389.1| asparaginyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 447

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 114/348 (32%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    R+   +  RN I  +  ++F +N FI+ DS  L    GN       +
Sbjct: 124 LDNRHLWLRSK--RQMAMMQVRNAIIYASYDFFAKNGFIKFDSPILS---GNAAEN---T 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+     +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGNSAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                ++++ +      ++   +       +   +              +   +  + D 
Sbjct: 235 EYPFVTHDESLDIQEAYVKALIQGVLDN--AAYALETLERDTSMLQKYIDTPFKRVSYDA 292

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I    G+     +  YP
Sbjct: 293 AIDLLQAHENDEDTDYEHVE-----------HGDDFGSPHETWISNYYGV--PIFIVNYP 339

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++   E+   ++  +++      +
Sbjct: 340 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSERETDYDLLLKKIADFGLD 394

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +L          +G  +G +R+V  V G  +I E I  P  
Sbjct: 395 PKDYDW-YLELRKFGSVPHAGFGLGLERMVTFVAGTEHIREAIPFPRM 441


>gi|313611206|gb|EFR86012.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 106

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 1/102 (0%)

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               D RFT RFEL+    E  NA  EL DPI+QR RFE +M+E+++  +E + +D DFL
Sbjct: 4   KNKEDERFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGMDADFL 63

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
             L   +P + G+ +G DRLVML+T A +I +++  P  +  
Sbjct: 64  EALEYGLPPTGGLGIGVDRLVMLLTNAPSIRDILLFPTMKHR 105


>gi|150391907|ref|YP_001321956.1| asparaginyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|166980083|sp|A6TVS9|SYN_ALKMQ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|149951769|gb|ABR50297.1| asparaginyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 463

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 108/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+   +  +  S       +   ST   
Sbjct: 122 AHLRPRSNAFSAVFRVRSIAAFAIHQFFQEKGFVYTHTPIVTGSDAEGAGEMFRVSTLDF 181

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   K   L  S + + +    A  +K++ F   +R        H
Sbjct: 182 KNIPLDEEQQVDFKKDFFGKETSLTVSGQLAAEAYALA-FKKVYTFGPTFRAENSNTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M+   ++++                    F++     + + 
Sbjct: 241 ASEFWMIEPEIAFADLQDNMELAEDMLKYMIRYV----MEQAPEELEFFNQFVDKGLIDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               AN + G                  Q++G    +   W           +   +   
Sbjct: 297 LNHVANSEFGKVTYTE-------AVKMLQESGEEFEYPVEWGHDLQTEHERYLTEKVFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    I       E++   ++  R +    
Sbjct: 350 PV-FVMDYPKDIKAFYMRMNDDNKTVAAMDLLVPGI------GEIIGGSQREERLDVLTD 402

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K++  +       +L        + +G  +GF+R +M +TG  NI +VI  P +
Sbjct: 403 RMKQMGLDEEEY-WWYLELRKYGGVKHAGYGLGFERAIMYLTGMANIRDVISYPRT 457


>gi|315607440|ref|ZP_07882436.1| asparagine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315250872|gb|EFU30865.1| asparagine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 466

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 113/356 (31%), Gaps = 38/356 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  YF E+ F    +  +  S       +   +T+ +
Sbjct: 122 AHLRLRTNTFGAVFRIRHHMAMAIHRYFHEHGFFYFHTPIITASDCEGAGEMFQVTTKNL 181

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 182 YNLEKDEEGRIKYDDDFFGKTTSLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + LM    + I+   + A            N   +         
Sbjct: 241 LAEFWMIEPEVAFLEQQGLMDLEEDFIKYCVKWALDNCKDDLEFLNNMIDKS-------L 293

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
            AR   +     +         +L  +A +AG +  +  +W    +      +  +    
Sbjct: 294 IARLEGVLKEDFVRLTYTEGIRIL-EEAVKAGQKFENPVSWGVDLASEHERYLVEHHFRK 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP    A       D R  +  ++    I       E++    +   ++K M 
Sbjct: 353 PV-IMTDYPKDIKAFYMKINEDGRTVQGTDVLFPQI------GEIIGGSVREENYDKLMG 405

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E ++       +   +L          +G  +GF+RL++ VTG  NI +VI  P +
Sbjct: 406 EVERRNVPMKDM-WWYLDTRKYGTCPHAGFGLGFERLILFVTGMQNIRDVIPFPRT 460


>gi|2664210|emb|CAA10904.1| asparaginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 566

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 106/368 (28%), Gaps = 54/368 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  +  ++F E+ F+ + S  +  S           +T + 
Sbjct: 214 AHLRPRTNTFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGAGEQFCVTTLIP 273

Query: 68  IQ-----------------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
                                    D   KP +L  S + + +    A    ++ F   +
Sbjct: 274 SSHEYTDTSIDAIPKTKGGLIDWSQDFFGKPAFLTVSGQLNGETYATA-LSDVYTFGPTF 332

Query: 105 RNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R        H  EF M+E   A    +  M      ++   +                  
Sbjct: 333 RAENSNTSRHLAEFWMIEPELAFADLDDDMACATAYLQYVVKYVLDNCKED--------M 384

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
           E     + +   R  +             D   + L+A +   +      W         
Sbjct: 385 EFFDTWIEKGIIRRLSDVAEKEFLQLGYTDAIEILLKANK---KFDFPVKWGLDLQSEHE 441

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             I          I+  YP    A       D +     ++    I       EL+   +
Sbjct: 442 RYITEEAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDMLVPRI------GELIGGSQ 495

Query: 284 QRHRFEKEMQEKK--KIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +  R E         K+  E+Y     +L          +G  +GF+RLV  VTG +NI 
Sbjct: 496 REERLEVLEARLDELKLNKESY---WWYLDLRRYGSVPHAGFGLGFERLVQFVTGIDNIR 552

Query: 341 EVIWTPFS 348
           +VI  P +
Sbjct: 553 DVIPFPRT 560


>gi|15236037|ref|NP_193462.1| NS1; asparagine-tRNA ligase [Arabidopsis thaliana]
 gi|55584148|sp|O48593|SYNO_ARATH RecName: Full=Asparaginyl-tRNA synthetase,
           chloroplastic/mitochondrial; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS; Flags:
           Precursor
 gi|19310458|gb|AAL84964.1| AT4g17300/dl4685w [Arabidopsis thaliana]
 gi|332658474|gb|AEE83874.1| asparaginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 567

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 106/368 (28%), Gaps = 54/368 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  +  ++F E+ F+ + S  +  S           +T + 
Sbjct: 215 AHLRPRTNTFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGAGEQFCVTTLIP 274

Query: 68  IQ-----------------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
                                    D   KP +L  S + + +    A    ++ F   +
Sbjct: 275 SSHENTDTSIDAIPKTKGGLIDWSQDFFGKPAFLTVSGQLNGETYATA-LSDVYTFGPTF 333

Query: 105 RNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R        H  EF M+E   A    +  M      ++   +                  
Sbjct: 334 RAENSNTSRHLAEFWMIEPELAFADLDDDMACATAYLQYVVKYVLDNCKED--------M 385

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
           E     + +   R  +             D   + L+A +   +      W         
Sbjct: 386 EFFDTWIEKGIIRRLSDVAEKEFLQLGYTDAIEILLKANK---KFDFPVKWGLDLQSEHE 442

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             I          I+  YP    A       D +     ++    I       EL+   +
Sbjct: 443 RYITEEAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDMLVPRI------GELIGGSQ 496

Query: 284 QRHRFEKEMQEKK--KIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +  R E         K+  E+Y     +L          +G  +GF+RLV  VTG +NI 
Sbjct: 497 REERLEVLEARLDELKLNKESY---WWYLDLRRYGSVPHAGFGLGFERLVQFVTGIDNIR 553

Query: 341 EVIWTPFS 348
           +VI  P +
Sbjct: 554 DVIPFPRT 561


>gi|148378598|ref|YP_001253139.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           3502]
 gi|153932838|ref|YP_001382985.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           19397]
 gi|153935177|ref|YP_001386531.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166231659|sp|A7FRK8|SYN_CLOB1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|166231660|sp|A5HZE1|SYN_CLOBH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148288082|emb|CAL82150.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           3502]
 gi|152928882|gb|ABS34382.1| asparaginyl-tRNA synthetase [Clostridium botulinum A str. ATCC
           19397]
 gi|152931091|gb|ABS36590.1| asparagine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 463

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 104/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+  ++  +  S       +   +T   
Sbjct: 122 AHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDL 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D    P  L  S + S +    A    ++ F   +R        H
Sbjct: 182 NNIPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALA-FRNVYTFGPTFRAENSNTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       + +  ++++                    F+      + + 
Sbjct: 241 ASEFWMIEPEMAFAELTDYLDNAEDMVKFVINYV----MENAPEEMAFFNSFVDKGLFDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D                    Q++G++  ++  W           +   +   
Sbjct: 297 LDNVVNSDFKRITYTE-------AVELLQKSGVKFDYEVEWGIDLQTEHERYLTEQIFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +     +L    + E+               R E+  
Sbjct: 350 PV-FVTDYPKDIKAFYMRLNDDGKTVAAADLLVPGVGEIIGGSQREERLDVLEKRMEELN 408

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+            +L        + SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 409 LNKEDY--------WWYLELRKYGETKHSGYGLGFERILMYITGMTNIRDVIPFPRT 457


>gi|76801236|ref|YP_326244.1| aspartyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|97196739|sp|Q3IT59|SYD_NATPD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|76557101|emb|CAI48675.1| aspartate--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 433

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 56/336 (16%), Positives = 113/336 (33%), Gaps = 43/336 (12%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     R  +  ++RE F +    EI++  +  + G E       TEL    +  +  ++
Sbjct: 131 QAIFEIRAEVLRAVREAFRDANATEINTSKIVAT-GTEGG-----TELFPITYFGEEAFM 184

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   + +  +  E++F     +R  E     H  E T +++  A   +   M  C 
Sbjct: 185 NQSPQLFKQLVAGSNIERVFEIGPIFRAEEHNTPRHLNEATSIDFEGAFCDHTDAMDVCE 244

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            ++  A E   +                              I      + P+ P   L 
Sbjct: 245 QVVTAAYEAVAENCTDQ--------------------LEALGI--TEEFEVPETPFPRLS 282

Query: 198 YLQAQQ---AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           Y +A +   A   +     W D       + +  ++G      +  +PA       +   
Sbjct: 283 YEEAIERINATGELDEQLVWGDDLPTEGEKALGDDVG--GHYFITDWPAEIKPFYIMDHE 340

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           D   +  F++    +EL +         E    FE++      +  E +     +     
Sbjct: 341 DGELSTGFDMMHPRMELVSGGQREHRREELIAGFEQQ-----GLEPEAFEY---YTKMFK 392

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             MP  +G  +G +RL+M +   +NI E +  P  +
Sbjct: 393 YGMPPHAGWGLGGERLLMTMLDLDNIREAVLFPRDR 428


>gi|70726459|ref|YP_253373.1| asparaginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|82582281|sp|Q4L6F8|SYN_STAHJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|68447183|dbj|BAE04767.1| asparaginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 430

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 108/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F EN F +ID   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   ++F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDEDAFLSQSGQLYMEAAAMAH-GRVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +  + D
Sbjct: 224 PEMAFTNHVESLEVQEQYVSHVVKSVLKNC--------------------QLELKALDRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +       +D  W + F       I  +   +    +  Y
Sbjct: 264 TSKLEKVSAPFPRISYDDAIKFLKEEGFNDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P +       +L A     E+    + + D      R ++      ++
Sbjct: 322 PTKIKPFYMQPNPENEETVLCADLIAPEGYGEIIGGSERINDLELLEQRIDE-----HQL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E+Y    D           SG  +G +R V  ++G  ++ E    P  
Sbjct: 377 DAESYNYYLDLRR--YGSVPHSGFGLGLERTVAWISGVEHVRETAPFPRL 424


>gi|49483643|ref|YP_040867.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425520|ref|ZP_05601945.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428179|ref|ZP_05604577.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430809|ref|ZP_05607191.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433567|ref|ZP_05609925.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436409|ref|ZP_05612456.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|258422514|ref|ZP_05685422.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|282904037|ref|ZP_06311925.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282905802|ref|ZP_06313657.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282911033|ref|ZP_06318835.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914245|ref|ZP_06322032.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282919168|ref|ZP_06326903.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282924352|ref|ZP_06332026.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283958219|ref|ZP_06375670.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293501271|ref|ZP_06667122.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510232|ref|ZP_06668940.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526827|ref|ZP_06671511.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427964|ref|ZP_06820596.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|59798534|sp|Q6GGV5|SYN_STAAR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49241772|emb|CAG40463.1| putative asparaginyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257271977|gb|EEV04115.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275020|gb|EEV06507.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278937|gb|EEV09556.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281660|gb|EEV11797.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284691|gb|EEV14811.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|257847271|gb|EEV71277.1| asparaginyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|282313739|gb|EFB44132.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316978|gb|EFB47352.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322313|gb|EFB52637.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282324728|gb|EFB55038.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282331094|gb|EFB60608.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595655|gb|EFC00619.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790368|gb|EFC29185.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920385|gb|EFD97449.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096276|gb|EFE26537.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467176|gb|EFF09694.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295128322|gb|EFG57956.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|315195352|gb|EFU25739.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 430

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F ++ F ++D   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +    D
Sbjct: 224 GEMAFTNHAESLEIQEQYVTHVVKSVLENC--------------------KLELKMLERD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 264 TSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P +       +L A          E++   E+    E  ++  ++  +
Sbjct: 322 PTKIKPFYMQPNPENEETVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D            G  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEEAYSYYLDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 424


>gi|229196430|ref|ZP_04323177.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228587067|gb|EEK45138.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 428

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 106/341 (31%), Gaps = 44/341 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 120 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 173

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 174 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVEIGFINDFHE 233

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 234 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 274 TLLE-AQEILKSKYRKESPIGDLDTEGEKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED-- 308
               +P  T  F+L    +E+ +    + +       F            +    D+   
Sbjct: 332 PNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASF----------NEKGLHPDKFQS 381

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +L       P   G  +G +R+V  +    N+ E    P  
Sbjct: 382 YLNTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 422


>gi|257215916|emb|CAX83110.1| lysyl-tRNA synthetase [Schistosoma japonicum]
          Length = 364

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 75/193 (38%), Gaps = 25/193 (12%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++Q+P   +   +++  +R+R              + R  I + +R++  +  F+E+++ 
Sbjct: 171 LYQLPHMHYGVKDKETRFRQRYLDLLMNEEVRRRFITRARIVNYVRKFLDDLGFLEVETP 230

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   LY++ +PE   K L+  G  +++     +RN 
Sbjct: 231 MMNTIAGGAA-AKPFIT---YHNELNMNLYMRVAPELYLKMLVIGGLNRVYELGRVFRNE 286

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y A+  YE LM    +++    +            +         
Sbjct: 287 GIDLTHNPEFTSCEFYMAYADYEDLMTITEDLLSGLVKHLFGSYIIKYRPDGPESEEVIV 346

Query: 160 NPFSEPEYITVAE 172
           +     + I   +
Sbjct: 347 DCTPPFKRINFYD 359


>gi|255514166|gb|EET90428.1| asparaginyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 438

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 66/350 (18%), Positives = 116/350 (33%), Gaps = 39/350 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R         +  R+ I   LRE+  +  F EI +  L  S   ET    F 
Sbjct: 117 LDKRHLWLRSMKMIS--IMKARSYIFRYLREFHDKKGFYEI-TPPLITSVAGETGADMFK 173

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
                 D+  +  +L  S +   + ++ A  EK++ FA ++R  +     H  E+  LE 
Sbjct: 174 V-----DYFGQEAFLTESSQPYAEAMVYA-LEKVYSFAPSFRAEKSRTTKHLAEYWHLEM 227

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             AH + ++LM     ++   A+    K                             +D 
Sbjct: 228 EAAHYNLKKLMDFEERMVGSVAQKLADKNQDILAQ--------------------LGVD- 266

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L     P + L Y QA     +      W D     + E+       +    +  +P
Sbjct: 267 PALLKKIKPPFKRLTYEQAIDLLNQKGKSLKWGDDLG--VEEEKLLTEEEDKPVFVMYWP 324

Query: 243 APESALANI-YPADPRFTKRFELY-ACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                  +   P DPR T   +L       E+  A + +    E   RF +   E  K  
Sbjct: 325 KELKPFYSPINPKDPRTTLSVDLQAPHGHGEIIGASERVWKYDELMDRFHE--VEAAKGV 382

Query: 300 NETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  E ++          +G  +G +RL+  +   ++I + I  P  
Sbjct: 383 KFNIKNYEWYIDLRRYGSVPHAGFGLGTERLIKWLLNLDHIRDAIPFPRM 432


>gi|289617341|emb|CBI56108.1| unnamed protein product [Sordaria macrospora]
          Length = 915

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 103/332 (31%), Gaps = 25/332 (7%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +        I S  R Y  +  FIEI +  LQ +   E+    F       ++  +  +L
Sbjct: 253 QSIFRINAGICSVFRRYLEDKGFIEIHTPKLQPAA-TESGAEVFKV-----NYFGRNAFL 306

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+ + +  ++A   ++F     +R  +     H  E+T ++   A E         +
Sbjct: 307 AQSPQLAKQMSISADFGRVFEIGPVFRAEDSNTHRHLTEYTGMDLEMAIEQDYHEAMQII 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +           +  +          E +            D    L++    D H  
Sbjct: 367 DGLMKEIFKGIYGKYRKEIEIIKTRFPHEDLVWLPETPIIPFKDAIKLLNDSGWTDDHGR 426

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
                +  +    +     +                   I+D++PA       ++ P D 
Sbjct: 427 PAVETE-DLSTRAEIQLGKVI---------KEKYKTDYYIIDKFPASVRPFYTHLDPEDD 476

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM 316
           RFT  F+++    E+      +  P     R        KK   E   + E        +
Sbjct: 477 RFTNSFDIFLRGQEITTGGQRIHRPHLLEERM-------KKAGIEPLGMQEYLQGFDYGV 529

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +G  +G +R+V L+    +I      P  
Sbjct: 530 LPHAGCGIGLERIVFLLLNLGDIRNASLYPRD 561


>gi|283784757|ref|YP_003364622.1| asparaginyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282948211|emb|CBG87778.1| asparaginyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 466

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNMIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNEQGKVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++ A         + +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFANLNDIAALAEAMLKYAFNAV----LTERADDMKFFAERVDKEAISR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G    +   W    S      +       
Sbjct: 300 LERFIAADFAQV-------DYTDAVTILENCGKTFENPVYWGVDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNNDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RMLEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|297591066|ref|ZP_06949704.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|297575952|gb|EFH94668.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438141|gb|ADQ77212.1| asparagine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 432

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN +  +  E+F ++ F ++D   L   +P   + +  F
Sbjct: 116 MDHRHLWLRSK--KQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSEL--F 171

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 172 HTK-----YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +                      +   +    D
Sbjct: 226 GEMAFTNHAESLEIQEQYVTHVVKSVLENC--------------------KLELKMLERD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W + F       I  +   +    +  Y
Sbjct: 266 TSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNY 323

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKI 298
           P           P +       +L A          E++   E+    E  ++  ++  +
Sbjct: 324 PTKIKPFYMQPNPENEETVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGL 378

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y    D            G  +G +R V  ++G  ++ E    P  
Sbjct: 379 DEEAYSYYLDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 426


>gi|209879756|ref|XP_002141318.1| aspartyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209556924|gb|EEA06969.1| aspartyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 537

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 59/355 (16%), Positives = 116/355 (32%), Gaps = 47/355 (13%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHI 59
            +D     R               + M+    RE+ ++N+FIEI +   L  +       
Sbjct: 207 LQDVRLDNRVLDLRTFANQAIFRIQAMVCELFREFLIQNRFIEIHTPKILGGASEGGA-- 264

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 +    +  +P  L  SP+   +  +    +++F     +R        H  EF 
Sbjct: 265 -----SVFTLKYFGQPACLAQSPQLYKQMAICGDMDRVFEIGPVFRAENSNTHRHLCEFV 319

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+     ++    + D +  +          IF F  +N     E E I+   +F  + 
Sbjct: 320 GLDIEMTIKNSYIEVVDLLEELF---------IFIFNGINTRCQYELEVISNNYSFPPF- 369

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI---FSRILIEKIEPNLGINCC 235
                    N  +          +++G+ + ++    D+     ++L   ++     +  
Sbjct: 370 -----KIPVNTPRLTFEEGCNLLRESGVEIPNNIKEFDLSTEHEKLLGSIVKEKYNSDFY 424

Query: 236 TILDRYPAPESALA-NIYPADPR-FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            +L RYP           PADP  ++  ++ +    E+ +    + D      R E+   
Sbjct: 425 ILL-RYPLKVRPFYTMPDPADPENWSNSYDFFMRGEEIISGAQRIHDYDFLMKRAEECGL 483

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + I      ID   L          G  +G +R+VML     NI      P  
Sbjct: 484 VIESIKE---YIDSFKLGAF----PHGGCGIGLERVVMLFLNLGNIRRSSMFPRD 531


>gi|329957323|ref|ZP_08297843.1| asparagine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328523036|gb|EGF50139.1| asparagine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 467

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 109/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ E+F +  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHEFFHKKGFFYFHTPIITGSDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A            + F +         
Sbjct: 242 LAEFWMVEPEVAFNDIADNMDLAEEFIKFCVQWALDNCADDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +   + +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 VERLQGVLKESFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +  +R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNDDGKTVRAMDVLFPKIGEIIGGSERESDYAKLMNRIEEL 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMTNIRDVIPFPRT 461


>gi|302874889|ref|YP_003843522.1| aspartyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307690494|ref|ZP_07632940.1| aspartyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302577746|gb|ADL51758.1| aspartyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 429

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 114/332 (34%), Gaps = 38/332 (11%)

Query: 16  YRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRK 74
            + R     +  I ++ R +    +F E+ +   +  S    +       E+   D+  +
Sbjct: 123 PKTRAIFKVQEEIANAFRNFLTAQRFSEVRTPKIISSSTEGGS-------EMFTVDYFGR 175

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLM 133
             +L  SP+F  + ++ AG E++F    A+R        H  E+  L+        E  +
Sbjct: 176 RAFLTQSPQFYKQMMVGAGFERVFEIGFAYRAELHNTWRHLNEYVSLDVEMGFIEDENEL 235

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
            D    +        +K  + +                        ++L   ++ P  P 
Sbjct: 236 MDLEEALINHIYDHLRKTCARE-------------------LEIFKVELPEKVEIPRMPL 276

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIY 252
                +   +  +R    +  ++    +L + I+   G +    L  YP  +  +     
Sbjct: 277 PEAQEILLDKFNLRSPVGNISAEG-EVVLSDYIKKTYGSD-FVFLTHYPVSKRPMYAMPD 334

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           P +P  TK F+L    +E+      + D    +   +   + K    +  + +D      
Sbjct: 335 PENPELTKSFDLIFKGLEITTGGQRINDYEMLKENIK---KFKLNPDDFAFYLD----NF 387

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
              MP   G A+G +R+ + +   +NI E   
Sbjct: 388 KYGMPPHGGFAIGLERITLKILNLDNIREATL 419


>gi|229133032|ref|ZP_04261873.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228650450|gb|EEL06444.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 437

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 108/340 (31%), Gaps = 42/340 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
            H R       ++ +  S  E+ +EN F  + +   +        +       +    + 
Sbjct: 129 RHERIAAIFKVKSTLVQSFSEFLIENDFTRVFTPKIVSQGAEGGAN-------VFKLSYF 181

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYE 130
           +K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + 
Sbjct: 182 QKEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFINDFY 241

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++M+   +++R   +   +                      E   +   I++    + P 
Sbjct: 242 EVMQLETDVLRYMFQQVGETC--------------------EKELQLLQIEVPVITEIPK 281

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA- 249
                      +    + +          ++L + ++          +  YP     +  
Sbjct: 282 IT-LSEAQEILKSKYRKESPIGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYT 339

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                +   T  F+L    +E+ +    + +       F++     K +++E +     +
Sbjct: 340 MQNKENSAITDSFDLLYKGLEITSGAQRIHNHDMLLASFKE-----KGLHSEKFQ---SY 391

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           L       P   G  +G +R+V       N+ E    P  
Sbjct: 392 LDTFRYGCPPHGGFGIGLERIVYKFLELTNVREASAFPRD 431


>gi|149642573|ref|NP_001092337.1| probable asparaginyl-tRNA synthetase, mitochondrial [Bos taurus]
 gi|148743934|gb|AAI42046.1| NARS2 protein [Bos taurus]
          Length = 477

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 54/348 (15%), Positives = 102/348 (29%), Gaps = 36/348 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R       L  R+   +++  +F ++ F+ I +  +  +       +  F  E   
Sbjct: 144 HLRCRTNVLGSVLRVRSEATAAIHSFFKDSGFVHIHTPVITSNDCEGAGEL--FQVEPSS 201

Query: 69  ------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                 ++    P++L  S +    ++++    ++F F   +R        H  EF M+E
Sbjct: 202 KIKVPEENFFNIPVFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVE 260

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +     Q +   M  +     +            C+ F  P      E   +     
Sbjct: 261 AEISFLESLQDLMQVMESLFKTTAMTVLSNCPKDVELCHKFLAPGQKDRLEHMLK----- 315

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                +N             +QA         W         + +  + G      +  Y
Sbjct: 316 -----NNFLIISYTEAVEILKQASQNFTFTPEWGADLHTEHEKYLVKHCGDIPV-FVINY 369

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKKKIYN 300
           P            D        +      L     EL     +  R+   E +  +    
Sbjct: 370 PLVLKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGSLREERYHLLEQRLARLGLT 425

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E Y     +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 426 EAYQ---WYLDLRRFGSVPHGGFGMGFERYLQCILGIDNIKDVIPFPR 470


>gi|298480190|ref|ZP_06998388.1| asparagine--tRNA ligase [Bacteroides sp. D22]
 gi|298273471|gb|EFI15034.1| asparagine--tRNA ligase [Bacteroides sp. D22]
          Length = 467

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 105/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDERGSISYEDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A            + F +     + E 
Sbjct: 242 LAEFWMIEPEVAFNDITDNMDLAEEFIKYCVKWALDNCADDVKFLNDMFDK----GLIER 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
                  D           D   +  +A   G +      W  D+ S      +E +   
Sbjct: 298 LQGVLKDDFVRLPY----TDGIKILEEAVAKGHKFEFPVYWGVDLASEHERFLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KRPVILIDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYNKLMTRIEEM 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 461


>gi|255523993|ref|ZP_05390955.1| asparaginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296186852|ref|ZP_06855253.1| asparaginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255512280|gb|EET88558.1| asparaginyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048566|gb|EFG87999.1| asparaginyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 463

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 109/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+  ++  +  S       +   +T  +
Sbjct: 122 AHLRPRSNTFSAVFRVRSVAAFAVHKFFQEKGFVYANTPLITGSDCEGAGEMFRLTTLDL 181

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   K   L  S + S +    A    ++ F   +R        H
Sbjct: 182 ENVPKDENGKVDYSKDFFGKETNLTVSGQLSAETFALA-FRNVYTFGPTFRAENSNTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M    ++++   +       +        F+      + + 
Sbjct: 241 AAEFWMIEPEMAFAELKDYMDIAEDLVKYIIKYV----LANAPEEMEFFNSFIDKGLFDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               AN D G                  +++G    +   W           +   +   
Sbjct: 297 LDNVANSDFGRISYTE-------AVDILKKSGHEFQYPVEWGIDLQTEHERYLTEKVFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    +       E++   ++  R +   +
Sbjct: 350 P-IFVTDYPKDIKAFYMRANEDGKTVAAADLLVPGV------GEIVGGSQREERLDILEK 402

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++          +L        + SG  +GF+R++M +TG +NI +VI  P +
Sbjct: 403 RIDEMGLSKEDY-WWYLELRKYGETKHSGFGLGFERILMYITGMSNIRDVIPFPRT 457


>gi|284037331|ref|YP_003387261.1| asparaginyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283816624|gb|ADB38462.1| asparaginyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 479

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 114/363 (31%), Gaps = 40/363 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R       L  R+ +  ++ +YF +N F  +++  +  S       +        
Sbjct: 121 AHLRPRTNTFSAILRIRHALAFAVHKYFNDNGFYYLNTPIITASDAEGAGEMFRVTTLDA 180

Query: 60  -RAFSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +   TE    D+  +  +     L  S +    +L A    KI+ F   +R        
Sbjct: 181 TKPPLTEDGKVDY-SQDFFGRETNLTVSGQL-EGELGAMALGKIYTFGPTFRAENSNTTR 238

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E  M    + ++     A Q          +   + E     E
Sbjct: 239 HLAEFWMIEPEMAFYELEDNMNLAEDFVKTVIRYALQHCADDLAFLDSRLKDEEKTKKKE 298

Query: 173 AFARYANIDLGTTLDNPD------QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             +    ++    + + +           +L         +  ++ +W           +
Sbjct: 299 EQSELGLLEKLQFVISNEFVRLTYTEAIDILVNSKPAKKGQFQYEVSWGVDLQSEHERYL 358

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQR 285
                     IL  YP    A       D +  +  ++    I E+        D  +  
Sbjct: 359 VEKHFKKPV-ILTNYPREIKAFYMKQDPDGKTVRAMDVLFPGIGEIIGGSQREDDLDKLT 417

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R ++   E + +          +L          +G  +GF+RLV+ VTG  NI +VI 
Sbjct: 418 ARMQEVGIEPEAL--------WWYLDTRRFGSAPHAGFGLGFERLVLFVTGMGNIRDVIP 469

Query: 345 TPF 347
            P 
Sbjct: 470 FPR 472


>gi|229184424|ref|ZP_04311631.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228599220|gb|EEK56833.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 432

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 115/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKKC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQEILNSKYRKESPIGDLDTEG-EKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
            +  +   T  F+L    +E+ +    + +       F++     K ++ +T+     +L
Sbjct: 336 PHKENASITDSFDLLYKGLEITSGAQRIHNYEMLLASFKE-----KGLHPDTFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERVVYKLLELSNVREASAFPRD 426


>gi|168051607|ref|XP_001778245.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670342|gb|EDQ56912.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 525

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 108/332 (32%), Gaps = 31/332 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     +  + +  R+  ++  F+E+ +  L       +   +        D+  +P  L
Sbjct: 217 QAIFRIQCQVSALFRQALLDENFVELHTPKLI---AGASEGGSSV---FKLDYKGQPACL 270

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   +  + A   ++F     +R  +     H  EFT L++    + +   + D +
Sbjct: 271 AQSPQLHKQMAICADFGRVFEIGPVFRAEDSFTHRHLCEFTGLDFEMEIKEHYFEVLDVL 330

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
             +            + Q    N     E +       R                     
Sbjct: 331 EKVFLTIFDGLNTKCAKQLEAINEQYPFEPLKYLPQTLRLT---------------FAEG 375

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
               ++AGI V     ++    + L + ++     +   +L RYP+            D 
Sbjct: 376 VAILKEAGIEVDPMADFNTETEKTLGKLVKERYKTD-FYVLHRYPSGIRPFYTMPCWDDK 434

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM 316
            ++  F+++    E+ +    + DP     R  +   + K +   T  ID          
Sbjct: 435 SYSNSFDVFIRGEEIISGAQRIHDPELLTKRATECGIDVKSL---TTYIDSF----RYGA 487

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           P   G  +G +R+VML    NNI +    P  
Sbjct: 488 PPHGGAGVGLERVVMLFCALNNIRKTSLFPRD 519


>gi|73662599|ref|YP_301380.1| asparaginyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82582282|sp|Q49XR0|SYN_STAS1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|72495114|dbj|BAE18435.1| asparaginyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 430

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 110/350 (31%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F +N F +ID   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEIIRATYEFFNDNGFTKIDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   ++F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDQDAFLSQSGQLYMEAAAMAH-GRVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   + Q ++     +    +                 S+ E +T       YA+  
Sbjct: 224 PEMAFCEHAQSLEVQEQYVTHVVKSVLNHCKLELKALDRDTSKLEKVTTPFPRITYAD-- 281

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                            +  ++ G     D  W + F       I  +   +    +  Y
Sbjct: 282 ---------------AVIFLKEQGFD---DIEWGEDFGAPHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P +       +L A     E+    + + D      R  +      ++
Sbjct: 322 PTKIKPFYMQPNPENEDTVLCADLIAPEGYGEIIGGSERINDLELLEERLSQ-----FEL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E+Y    D           SG  +G +R V  ++G  ++ E    P  
Sbjct: 377 DAESYSYYLDLRR--YGSVPHSGFGLGLERTVAWLSGVEHVRETAPFPRL 424


>gi|83645055|ref|YP_433490.1| asparaginyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123767469|sp|Q2SJV9|SYN_HAHCH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|83633098|gb|ABC29065.1| asparaginyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 465

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 102/356 (28%), Gaps = 42/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------- 58
            H R R          R  +  ++  +F E  F  I++  L  S      E         
Sbjct: 125 AHLRPRTNAFGAVTRVRTTLSHAVHHFFYEQGFQWINTPILTASDCEGAGELFRVSTLDM 184

Query: 59  IRAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T+    D+      K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ANLPKTDSGKIDYSKDFFGKETFLTVSGQLNVEAYCLAMS-KVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A              ++   +V   +  S           P+ ++  E 
Sbjct: 244 LAEFWMIEPEIAFADLNDDADLAERFLKHMFKVVLDER-SDDMAFFAERINPDVVSRLEN 302

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                 +          + D        Q  G +  +   W           +     + 
Sbjct: 303 MVDKEFV----------RIDYSEAIKILQNCGKKFEYPVQWGLDLQSEHERYLAETH-VG 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              I+  YP    A       D +             L     E++   ++  R +  + 
Sbjct: 352 APVIVMNYPKEIKAFYMRLNDDDKTVAAM------DVLAPGIGEIIGGSQREDRLDVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     + E      D           +G  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RIGDMHHKEELWWYRDLRR--YGSVPHAGFGLGFERLIAYVTGMENVRDVIPFPRT 459


>gi|329298731|ref|ZP_08256067.1| asparaginyl-tRNA synthetase [Plautia stali symbiont]
          Length = 466

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 106/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  +       R+ +  +L  +F EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNIVGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRDPQGNVDFDKDFFGKEAFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  + +        ++    +   ++    +  +   F+E         
Sbjct: 244 LAEFWMLEPEVAFATLDDAAALAEAMLNYVFKAVLEE----RADDMAFFAERVDKEAIAR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D         ++G    +  +W    S      +       
Sbjct: 300 LERFITTDFAQV-------DYTDAVDILLKSGQSFENPVSWGMDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +    
Sbjct: 353 PVVVK-NYPTDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLNA 405

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++       D  +   L        +G  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 406 RLAEMGL--NKEDYWWYRDLRRYGTVPHAGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|332653647|ref|ZP_08419391.1| asparagine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516733|gb|EGJ46338.1| asparagine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 469

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 104/356 (29%), Gaps = 43/356 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+    ++  +F +  F+ + +  +  S       +   +T  + 
Sbjct: 129 HLRPRTNLFSAAFRVRSATAHAIHCFFQDQGFVYVHTPIITASDCEGAGEMFQVTTLDLE 188

Query: 69  Q-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                         D   K   L  S + +C+    A    ++ F   +R  +     H 
Sbjct: 189 NVPKNEDGTVDYSKDFFGKRANLTVSGQLNCENFAMA-FGNVYTFGPTFRAEKSNTQRHA 247

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       M +   +I+        K         N F+      + E  
Sbjct: 248 AEFWMIEPEMAFADLNDYMDNAEAMIKYVIRYVLDKC----PDEINFFNSFVDKGLKERL 303

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
              A+ D                    ++   +      W           +   +    
Sbjct: 304 EHVASSDFARVSYTD-------AVKILEENNDKFDFKVYWGCDLQTEHERYLTEQVYKRP 356

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQ 293
              +  YP    A       D +     +     I       EL+   ++  R E  E +
Sbjct: 357 V-FVTDYPKEIKAFYMRQNDDGKTVAAADCLVPGI------GELIGGSQREERLELLENR 409

Query: 294 EKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++   +        +         + +G  +GF+R+VM +TG NNI +V   P +
Sbjct: 410 IQELGMDPKDY--WWYCDLRRYGSCRHAGYGLGFERMVMYLTGVNNIRDVELHPRT 463


>gi|295101200|emb|CBK98745.1| asparaginyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 462

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 55/367 (14%), Positives = 112/367 (30%), Gaps = 46/367 (12%)

Query: 1   MHQIPSQPWWNRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE 56
           +  +P+          R   F      R++   ++ ++F EN F+   S  L  S     
Sbjct: 119 LRTMPT-------LRPRTNTFNAAFRVRSVAAYAIHKFFQENGFVYAHSPLLTASDCEGA 171

Query: 57  THIRAFSTELIIQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHA 103
             +   +T  +               D   KP+ L  S +    + +A    K++ F   
Sbjct: 172 GEMFRVTTLDLDNVPKNEDGTVDYTKDFFEKPVNLTVSGQLEA-EAMAMAFGKVYTFGPT 230

Query: 104 WRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           +R  +     H  EF M+E   A       M     + +                    F
Sbjct: 231 FRAEKSFTTRHAAEFWMIEPEMAFCDLNGYMDTAEAMTKYVIRYV----LDNCPDEMAFF 286

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
           ++     + E     AN + G                  ++   +      W        
Sbjct: 287 NQFIDKGLIERLELVANSEFGRISYTD-------AIEILKKNNKKFQFPVEWGVDIQTEH 339

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +   +       +  YP    +      AD +     ++    I       EL+   
Sbjct: 340 ERYLTE-VVFKKPVFVTDYPKEIKSFYMKQNADGKTVAAADMLVPGI------GELIGGS 392

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINE 341
           ++   ++K +    ++  +    D    L       + +G  +GF+R++M +TG  NI +
Sbjct: 393 QREEDYDKLVTRMDELGLDKSSYDWYLNLRKFGG-VEHAGYGLGFERMIMYLTGIQNIRD 451

Query: 342 VIWTPFS 348
           V+  P +
Sbjct: 452 VLPFPRT 458


>gi|304382273|ref|ZP_07364780.1| asparagine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304336630|gb|EFM02859.1| asparagine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 467

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 104/356 (29%), Gaps = 40/356 (11%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST---- 64
           H R R          R+ +  ++ ++F +  F    +  +  S       +   +T    
Sbjct: 124 HLRLRTNTFGAVFRIRHHMAIAIHQFFHDRGFFYFHTPIITASDAEGAGQMFQVTTQNLY 183

Query: 65  ----ELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
               +   +       +     L  S +   +    +   +I+ F   +R        H 
Sbjct: 184 DLKKDEKGKIKYDDDFFGKMTSLTVSGQLEGELGATS-LGQIYTFGPTFRAENSNTPRHL 242

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A      LM    + I+   + A          +    +     T+ E  
Sbjct: 243 AEFWMIEPEVAFIDLNDLMDLEEDFIKYCVQWA----LDHCQDDLEFLNSMIDKTLLERL 298

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               +                    Q  +    V+      D+ S      +E +     
Sbjct: 299 RSVVSGSFKRLTYTEGIDILKEAVAQGHKFEFPVSWGM---DLASEHERYLVEEH--FKR 353

Query: 235 CTILDRYPAPESALANIYPADPRFTK-RFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             I+  YP    A       D +  +    L+    E+        D      +  ++++
Sbjct: 354 PVIMTDYPKEIKAFYMKLNDDNKTVQGTDVLFPQIGEIIGGSVREEDYG----KLMEQIE 409

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E+             +L           G  +GF+RL++ VTG  NI +V+  P +
Sbjct: 410 ERHI----PMKDMWWYLDTRKYGTCPHGGFGLGFERLILFVTGMQNIRDVVPFPRT 461


>gi|146298346|ref|YP_001192937.1| asparaginyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|146152764|gb|ABQ03618.1| asparaginyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 481

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 127/382 (33%), Gaps = 46/382 (12%)

Query: 3   QIPSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
             P +    +   + H R R       +  R+++  ++  YF +  F+ +++  +  +  
Sbjct: 104 MQPKKHSLEFLRENAHLRVRTNAFGAIMRVRSVLSYAVHSYFQQKGFVYVNTPIITGADA 163

Query: 54  GNETHIRAFSTELIIQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIF 98
                +  F    +  D++ K            +     L  S +    +  A    +I+
Sbjct: 164 EGAGEM--FQVTSLPLDNLPKNEEGNIDFKKDFFGKHTNLTVSGQL-EGETFAMALGQIY 220

Query: 99  CFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
            F   +R        H  EF M+E   A    +  M    + I+   + A          
Sbjct: 221 TFGPTFRAENSNTSRHLAEFWMIEPEVAFNDLDDNMDLAEDFIQYVIKYALDNCKDDLKF 280

Query: 158 NCNPFSEPEYITVAEAFARYANID--------LGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                 E E        +  A ++            +   +  D        ++   +  
Sbjct: 281 LEGRLLEEEKSKPQAERSEMALLEKLNFVLENNFKRVSYTEAIDILRDSTPNKKKKFQYL 340

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI--YPADPRFTKRFELYAC 267
            ++  +D+ S      +E +    C  IL  YPA   A         +P      E    
Sbjct: 341 INEWGADLQSEHERFLVEKH--FKCPVILYDYPANIKAFYMRLNDNTEPGR----ETVRA 394

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGF 326
              L     E++   E+  R++  +++ +K+  +   +   +L          +G  +GF
Sbjct: 395 MDILFPGIGEIVGGSEREERYDVLVEKMEKLGIDKEEL-YWYLDTRRFGSATHAGFGLGF 453

Query: 327 DRLVMLVTGANNINEVIWTPFS 348
           +RLV+ VTG  NI +VI  P +
Sbjct: 454 ERLVLFVTGMTNIRDVIPFPRT 475


>gi|312131851|ref|YP_003999191.1| asparaginyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908397|gb|ADQ18838.1| asparaginyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 480

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 58/377 (15%), Positives = 106/377 (28%), Gaps = 40/377 (10%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R          R+ +  ++ +++ E  F  + +  +  S    
Sbjct: 105 PKKHSLEFLREKAHLRFRTNVFGAVFRIRHALAYAVHKFYNEQGFFYLHTPIITASDAEG 164

Query: 56  ETHIRAFSTELIIQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCF 100
              +  F       +             +  +     L  S +   +    A   +I+ F
Sbjct: 165 AGEM--FRVSTFEPNKAPLTPEGNIDFSQDFFGRETALTVSGQLEGELGALA-LSRIYTF 221

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A    E  M    + ++     A +          
Sbjct: 222 GPTFRAENSNTSRHLAEFWMIEPEVAFFELEDNMNLAESFVKYVISYALENCKEDLEFLE 281

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPD------QPDRHLLYLQAQQAGIRVAHDDT 213
           N   E E        +    I+    +   D           +L         +  ++  
Sbjct: 282 NRLLEEEKQKPQNERSELKLIEKLKFVVENDFERLTYTEAIDILLKSKPAQKKQFQYEVA 341

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           W           +          IL  YP    A       +               L  
Sbjct: 342 WGIDLQSEHERYLVEKHFKKPV-ILTNYPKEIKAFYMKQDDELNGAPGAT-VRAMDVLFP 399

Query: 274 ACDELLDPIEQRHRFEKEMQE-KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
              E++   ++   +EK M   K+   +        +L          SG  +GF+RLV+
Sbjct: 400 GIGEIIGGSQREDNYEKLMARVKEVGIDPENI--WWYLETRKFGSAPHSGFGLGFERLVL 457

Query: 332 LVTGANNINEVIWTPFS 348
            VTG  NI +VI  P +
Sbjct: 458 FVTGMTNIRDVIPFPRT 474


>gi|167765417|ref|ZP_02437530.1| hypothetical protein BACSTE_03805 [Bacteroides stercoris ATCC
           43183]
 gi|167697045|gb|EDS13624.1| hypothetical protein BACSTE_03805 [Bacteroides stercoris ATCC
           43183]
          Length = 467

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 108/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ E+F +  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHEFFHKKGFFYFHTPIITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A            + F +         
Sbjct: 242 LAEFWMVEPEVAFNDITDNMDLAEEFIKFCVQWALDNCADDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +     +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLQGVLKENFVRLPYTEGIKIL-EEAVAQGHKFEFPVYWGVDLASEHERYLVEDH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +  +R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNDDGKTVRAMDVLFPKIGEIIGGSERESDYAKLMNRIEEL 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMTNIRDVIPFPRT 461


>gi|159042440|ref|YP_001541692.1| asparaginyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157921275|gb|ABW02702.1| asparaginyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 432

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 53/348 (15%), Positives = 106/348 (30%), Gaps = 41/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    R +  L  R+ I  ++ E+F  N + E+ +   +  +    + +  F
Sbjct: 117 LDMRHLWVRSR--RMQAVLKIRSTIFGAIHEWFRSNGYYEVQAPMFITSAVEGGSTL--F 172

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                  ++  +  YL  S +F  + L+ +  EK++  A ++R  +     H  EF   E
Sbjct: 173 EV-----NYFGEKAYLTQSSQFYLEALIFS-LEKVYTIAPSFRAEKSRTRRHLTEFWHAE 226

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E +     N+I    +   +      ++                        
Sbjct: 227 AEVAWAGLEDMFTVTENLISHIVKRVLESNLEDLSLLGRKTEP----------------- 269

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L+N   P   + Y +A     +   +  W D         +   L       L  +
Sbjct: 270 ----LENVKPPFPRVPYDEAINILNKKGFNLKWGDDIGADEERVL--TLEFTQPIHLHHF 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P    A  +        T                       +      K   ++  +  E
Sbjct: 324 PENVKAFYHRNDPSKPSTTLSVDVLAPEGYGEVVGGGERIYDYDELINK--IKRFNLNPE 381

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            Y     ++          +G  +G DRLVM + G ++I + +  P  
Sbjct: 382 DYQ---WYIDLRKYGSVPHAGFGLGVDRLVMWICGLDHIRDALPFPRD 426


>gi|326800729|ref|YP_004318548.1| asparaginyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326551493|gb|ADZ79878.1| Asparaginyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 481

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 114/365 (31%), Gaps = 37/365 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  +F E  F+ I +  +  S       +  F    +
Sbjct: 118 AHLRFRTNTFNAVFKVRNALSFAVHRFFNERGFVYIHTPIITGSDAEGAGEM--FKVTTL 175

Query: 68  IQDH----------IRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             D+           ++  +     L  S +   +    A    I+ F   +R       
Sbjct: 176 DLDNPPRNDDGSINFKEDFFGKSTNLTVSGQLEGELAALA-FGNIYTFGPTFRAENSNTT 234

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M     +++     A            N   E E     
Sbjct: 235 RHLAEFWMIEPEMAFYELKDNMDLAEELLKHVIRYALDTCSEELEFLKNRLQEEEKSKPQ 294

Query: 172 EAFAR--------YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
              +         +   +    L   +  D        Q+   +   ++  +D+ S    
Sbjct: 295 TERSELDLLAKLNFCLDNDFERLTYTEAIDILRRSKPNQKKQFKYLIEEWGADLQSEHER 354

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             +E +       IL  YPA   A       +    +  +       L     E++   +
Sbjct: 355 YLVEKH--FKKPVILTDYPADIKAFYM--RMNEPDEQGRKTVRAMDILFPGIGEIVGGSQ 410

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           +  R++  +   K+++     ++             SG  +GF+RLV+ VTG  NI +VI
Sbjct: 411 REERYDLLVNRMKEMHIPIEDMNWFLDTRRFGSVPHSGFGLGFERLVLFVTGMTNIRDVI 470

Query: 344 WTPFS 348
             P +
Sbjct: 471 PFPRT 475


>gi|257215914|emb|CAX83109.1| lysyl-tRNA synthetase [Schistosoma japonicum]
          Length = 388

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 75/193 (38%), Gaps = 25/193 (12%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           ++Q+P   +   +++  +R+R              + R  I + +R++  +  F+E+++ 
Sbjct: 194 LYQLPHMHYGVKDKETRFRQRYLDLLMNEEVRRRFITRARIVNYVRKFLDDLGFLEVETP 253

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     + F T     + +   LY++ +PE   K L+  G  +++     +RN 
Sbjct: 254 MMNTIAGGAA-AKPFIT---YHNELNMNLYMRVAPELYLKMLVIGGLNRVYELGRVFRNE 309

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN--------C 159
                H PEFT  E+Y A+  YE LM    +++    +            +         
Sbjct: 310 GIDLTHNPEFTSCEFYMAYADYEDLMTITEDLLSGLVKHLFGSYIIKYRPDGPESEEVIV 369

Query: 160 NPFSEPEYITVAE 172
           +     + I   +
Sbjct: 370 DCTPPFKRINFYD 382


>gi|187251209|ref|YP_001875691.1| asparaginyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971369|gb|ACC98354.1| Asparaginyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 431

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 117/349 (33%), Gaps = 47/349 (13%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAFST 64
           ++  W R    ++   L  R+ I  ++R++F E +F  +DS  L  +     + +  F T
Sbjct: 118 NRHLWLRSS--KQTAILKIRDEIIFAIRKFFHEREFTLVDSPILTPAACEGRSTL--FET 173

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           E     +  +  +L  S +    +  A    KI+CF   +R  +     H  EF M+E  
Sbjct: 174 E-----YFGEKAFLSQSGQLY-GEAAAMALGKIYCFGPTFRAEKSKTRRHLTEFWMVEPE 227

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A       M+   + I    E   +                      E   R       
Sbjct: 228 VAFNDLNDNMELAEDFIVYIVESVLK----------------NRRAELELIGR-----DI 266

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           + L+N  +P   + Y +A +    + +   W           I  +   +   I+ RYPA
Sbjct: 267 SKLENIKKPFPRVSYTEAIKILNDLGNPTEWGGDIGGDEETLI--SNKFDRPVIIHRYPA 324

Query: 244 PE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
              +      P DP+     ++       E+    +   D      R +++    + +  
Sbjct: 325 AIKAFYMKRDPEDPKVVLAMDVIGPEGAGEIIGGSERESDYNALVERMKEQGMAPEDMD- 383

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  MG +R+V  + G +++ E I     
Sbjct: 384 -------WYLDLRKYGSVPHSGFGMGIERMVRWICGLHHVRETIPFARM 425


>gi|156305178|ref|XP_001617534.1| hypothetical protein NEMVEDRAFT_v1g226003 [Nematostella vectensis]
 gi|156194390|gb|EDO25434.1| predicted protein [Nematostella vectensis]
          Length = 267

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 17/138 (12%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  I + +R+Y  + +F+E+++ 
Sbjct: 134 LRPLPDKHKGLQDTEMRYRQRYVDLITNEQSRKVFEARVKIVAGIRKYLADRRFMEVETP 193

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            LQ  PG  +  R F T     + + + +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 194 MLQVIPGGAS-ARPFITH---HNALDRDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 249

Query: 108 EQGCLHQPEFTMLEWYRA 125
                H PEFTM+E+Y+A
Sbjct: 250 GLSTRHNPEFTMIEFYQA 267


>gi|260583582|ref|ZP_05851330.1| asparagine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158208|gb|EEW93276.1| asparagine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 438

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 65/351 (18%), Positives = 118/351 (33%), Gaps = 39/351 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   +  RN I  +  E+F +N FI+ DS  L    GN       +
Sbjct: 115 MDHRHLWLRSS--KQHAIMQIRNAIIYASYEFFDQNGFIKFDSPILS---GNAAEN---T 166

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P +L  S +   +    A    +F F   +R  +     H  EF M++ 
Sbjct: 167 TELFETDYFGDPAFLSQSGQLYLEAGAMA-FGPVFDFGPVFRAEKSKTRRHLTEFWMMDA 225

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                ++++ +      ++   +    +             E     V+E F R +  D 
Sbjct: 226 EYPFVTHDESLDLQEAYVKALIQGVLDRS-PHALETLERDVELLKKYVSEPFKRISY-DE 283

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L    + D    Y   +             D F       I  + G+   T +  YP
Sbjct: 284 AIDLLQAHEADEDTDYEHLE-----------HGDDFGSPHETWISNHFGV--PTFVMNYP 330

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE-MQEKKKI-- 298
           A   +      P +       +L            E++   E+   ++K   + K+    
Sbjct: 331 ADIKAFYMKPVPGNESRVLCADL-----LAPEGYGEIIGGSEREVDYDKLYEKIKENGLN 385

Query: 299 -YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +  + +D   L         +G  +G +R+V  V G  +I E I  P  
Sbjct: 386 PDDYAFYLD---LRK-YGSVPHAGFGLGLERMVTFVAGTKHIREAIPFPRL 432


>gi|322832253|ref|YP_004212280.1| asparaginyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321167454|gb|ADW73153.1| asparaginyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 466

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 109/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       RN +  ++  ++ EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRNTLSQAIHRFYHENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 QNLPRTDKGEIDFSEDFFGKEAFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + + +     N+++   +    +    +  +   F++         
Sbjct: 244 LAEFWMVEPEVAFATLDDIAALAENMLKYVFKAVLDE----RADDMAFFADRVDKDAVAR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D             +  +  +W    S      +       
Sbjct: 300 LERFVTSDFAQV-------DYTDAVEILMNCDQKFENPVSWGVDLSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   N+    D  +   L        SG  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 406 RMAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLVAYVTGVQNVRDVIPFPRT 460


>gi|312215055|emb|CBX95008.1| similar to aspartyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 555

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 114/341 (33%), Gaps = 30/341 (8%)

Query: 13  DFHYR-RRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQD 70
           D   +  +   + ++ + +  +E+  +  F+ + +   L  +     +       +    
Sbjct: 234 DLRAKINQSIFVIKSGVCALFQEFLSKKGFVLVHTPKILGAASEGGAN-------VFELK 286

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESY 129
           +  +P YL  SP+F  + L+A+  +K+      +R        H  EFT L+     +  
Sbjct: 287 YFDRPAYLAQSPQFYKQMLIASRFQKVMEIGPVFRAENSNTARHLTEFTGLDLEMEFQEN 346

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              +   +  +           F F  +N     E E +        +   + G     P
Sbjct: 347 YHEVMGVLEDLML---------FIFGELNARYRKETELVRSVYHVDEFKLPESGKVPRIP 397

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA-L 248
            Q    +L    ++ G      D  +    + L + +      +    LD++P       
Sbjct: 398 FQEGIKMLREAGEELG----DYDDLTTPQEKKLGKLVLEKYNSD-FYTLDQFPLAIRPAY 452

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
               PADP  +  ++++    E+C+    + D           M++     +      +D
Sbjct: 453 TMPSPADPSLSNSYDMFMRGQEICSGAQRIHDSSLLAEM----MRKHDPPIDPAGAGTKD 508

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++ C     P  +G   G +R+V    G  NI      P  
Sbjct: 509 YVDCFKYGCPPHAGGGFGLERIVQFWLGLPNIRMCSLFPRD 549


>gi|289615277|emb|CBI58044.1| unnamed protein product [Sordaria macrospora]
          Length = 588

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 63/385 (16%), Positives = 116/385 (30%), Gaps = 53/385 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--- 52
           +  IP         H R R       L  R+   ++L  +F ++ F +     L  S   
Sbjct: 212 LRTIP---------HLRPRTPINAALLKMRSEAVAALTRFFADHDFTQTHPPILTSSDCE 262

Query: 53  PGNETH--------IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
              E                +   +   R   YL  S +    + LA     ++  +  +
Sbjct: 263 GAGEVFTVAPASNIAELTDEDNKSKMFFRNKKYLTVSTQLHL-EALAQSVGNVWTLSPVF 321

Query: 105 RNGEQGC-LHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           R  +     H  EF MLE   +     +++M    ++IR       +     + +N    
Sbjct: 322 RAEKSDTARHLSEFYMLEAEMSFVNDLDEVMDLAEDMIRNMCITMYESHTVHEFLNREGR 381

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
              + ++  E  AR+  +                L   A +      H   W++      
Sbjct: 382 VGSDLVSPEEVNARWEGMMAAEWPRLTYTDAIEFLQEHADK----FEHKPVWTEGLHSEH 437

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIY-PADPRFTKRFELYACNIELCNACDELLDP 281
            + I   +G      +  YP    A       + P  T       C   L     E+   
Sbjct: 438 EKFIAEQIGDGKPVFVTHYPRDIKAFYMREGQSIPDDTCPGPTVECFDLLVPDLCEIAGG 497

Query: 282 IEQRHRFEKEMQEKKK------------------IYNETYPIDEDFLACLT-EMPQSSGI 322
             + HR E  ++  K+                     +  P+D  ++           G 
Sbjct: 498 SMREHRLEPLLEAMKRHNIVAGEFTSSMDGDAPTGGAKAGPLDW-YVDLRRWGCAPHGGF 556

Query: 323 AMGFDRLVMLVTGANNINEVIWTPF 347
            +GFDRL+  +TG   I +++  P 
Sbjct: 557 GIGFDRLLCYLTGVQTIRDMVSFPR 581


>gi|296081811|emb|CBI20816.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 103/339 (30%), Gaps = 45/339 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  +++  R++ +   F+ I +  L    S G     R         D+  +P 
Sbjct: 96  QAIFRVQCQVENIFRQFLLSEGFVGIHTPKLIGGSSEGGSAVFR--------LDYKGQPA 147

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  +     ++F     +R  +     H  EFT L+     + +   + D
Sbjct: 148 CLAQSPQLHKQMAICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKEHYFEVMD 207

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +  A   +  +    +          E +       R                   
Sbjct: 208 IVDRLFVAMFDSLNENCKKELEAIERQYPFEPLKYLRKTLRLP---------------FQ 252

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
                 ++ G+ V      +    R L + +    G     IL RYP             
Sbjct: 253 EGVQMLKEVGMEVDPYGDLNTEAERKLGQLVLEKYGTE-FYILHRYPLAVRPFYTMPSYD 311

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFL 310
           DP ++  F+++    E+ +    +  P     R             E   ID      ++
Sbjct: 312 DPLYSNSFDVFIRGEEIISGAQRVHVPDFLEKR------------AEACGIDVKTISTYI 359

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+VML    NNI +    P  
Sbjct: 360 DSFRYGAPPHGGFGVGLERVVMLFCALNNIRKTSLFPRD 398


>gi|73988101|ref|XP_851061.1| PREDICTED: similar to CG6796-PA [Canis familiaris]
          Length = 477

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 53/361 (14%), Positives = 104/361 (28%), Gaps = 39/361 (10%)

Query: 2   HQIPSQPWWN-RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE 56
           H +  +          R       L  R+   +++  +F +N F+ I +  +  +     
Sbjct: 134 HPL--EYLRQYPHLRCRTNALGSILRVRSEATAAIHSFFKDNGFVHIHTPIITSNDCEGA 191

Query: 57  THIRAFSTELII------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
             +  F  E         ++    P +L  S +    ++++    ++F F   +R     
Sbjct: 192 GEL--FQVEPSSKIKMPEENFFNVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQ 248

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   +     Q +   M  +   A +            C+ F  P    
Sbjct: 249 SRRHLAEFYMVEAEISFVESLQDLMQVMEGLFKTATMMVLSNCPEDVELCHKFIAPGQKE 308

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             E   +          +N             +Q+         W         + +  +
Sbjct: 309 RLEHMLK----------NNFLIISYTEAVEILKQSSQNFTFTPEWGVDLHTEHEKYLVKH 358

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR-- 287
            G      +  YP            D        +      L     EL     +  R  
Sbjct: 359 CGNIPV-FVINYPLALKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGSLREERYH 413

Query: 288 FEKEMQEKKKIYN-ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F ++   +  +     + +D   L          G  MGF+R +  + G +NI +VI  P
Sbjct: 414 FLEQRLARSGLTETYQWYLD---LRRF-GSVPHGGFGMGFERYLQCILGIDNIKDVIPFP 469

Query: 347 F 347
            
Sbjct: 470 R 470


>gi|302828810|ref|XP_002945972.1| hypothetical protein VOLCADRAFT_72624 [Volvox carteri f.
           nagariensis]
 gi|300268787|gb|EFJ52967.1| hypothetical protein VOLCADRAFT_72624 [Volvox carteri f.
           nagariensis]
          Length = 545

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 101/337 (29%), Gaps = 42/337 (12%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDHIRKPL 76
           +     ++ +    +   +   F EI +  L      G     R         D++  P 
Sbjct: 238 QAIFRVQSAVCQIFKNTLLAEGFQEIHTPKLIAGASEGGAAVFR--------LDYMGVPA 289

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  + A  +++F     +R        H  EF  L+   A   +   + D
Sbjct: 290 CLAQSPQLYKQMAICADFDRVFEVGPVFRAEFSYTHRHLCEFMGLDLEMAIHEHYFEVLD 349

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            +  +  A        ++ +          +                  T          
Sbjct: 350 VIEKLFAAIFDGLSTEYAKELAVIAQQYPFD----------------VPTFKPLRLTFPE 393

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
            + L  Q     V      +    R L + ++   G +   IL RYP+            
Sbjct: 394 GIALLQQGGYPEVDPLGDLNTELERALGKIVKEKYGTD-FFILHRYPSAVRPFYTMPCAD 452

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID--EDFLAC 312
           DP ++  ++++    E+ +    + D      R                P+D  + ++  
Sbjct: 453 DPTYSNSYDVFIRGEEIISGAQRVHDAELLTERATAC----------GIPLDTIQSYIDS 502

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                P   G  +G +R+VML  G NNI +    P  
Sbjct: 503 FKLGAPPHGGAGVGLERVVMLYCGLNNIRKTSMFPRD 539


>gi|238854630|ref|ZP_04644960.1| asparagine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664427|ref|ZP_05865279.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932979|ref|ZP_06338376.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472177|ref|ZP_07812669.1| asparagine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832420|gb|EEQ24727.1| asparagine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|239529548|gb|EEQ68549.1| asparagine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|260561492|gb|EEX27464.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303014|gb|EFA95219.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 432

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 108/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN + ++  ++F +  FI+ D+  L   +P         
Sbjct: 116 LDHRHLWLRSR--RPFAIMQIRNEMINATYDFFKKEGFIKFDAPILMNSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++     YL  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 167 TTELFHIEYFDNDAYLSQSGQLYAEVGAEA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      I    +                      I   E        D
Sbjct: 226 PEMAWTHQDESLDVQERYISYLVKRV--------------------IDNCEYELNILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +       +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 VEKLRPAAEGNYTRLKYDDAVKMLQDAGRDFKWGDDFGAPDEAYISEQ--FDRPVFIMNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF---EKEMQEKKKI 298
           P            +       E    ++       E++   E+   F   + +++E   +
Sbjct: 324 PTSIKPFYMKKDPENPK----EYLCADMLAPEGYGEIVGGSEREENFDVLKAQIEE-AGL 378

Query: 299 YNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y   E +L          SG  +GF+R +  +   +++ E I  P  
Sbjct: 379 NLENY---EWYLDLRRYGSVPHSGFGLGFERAITWICHLDHLREAIPFPRM 426


>gi|119715425|ref|YP_922390.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|119536086|gb|ABL80703.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 424

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 96/337 (28%), Gaps = 40/337 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R+R             R       F E+ +     S   E+    F       D+  
Sbjct: 120 RHPRQRARWELAAASVRGFRATLDAAGFTEVQTPKFVASA-TESGANVFEV-----DYFG 173

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQL 132
           +P YL  SP+F  ++ L    E+++     +R        H  E+  L+         + 
Sbjct: 174 RPAYLAQSPQFYKQQ-LVGVFERVYEVGPVFRAEPHDTVRHLAEYVSLDVELGFVRDHRD 232

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +   +  +      A  +                   +     R A   +G   D PD  
Sbjct: 233 VLSVLRDVLAGMVAAVHEHVGAAVERSGAAIPVVPEEIPVLHFRDALALVGAPEDEPDLA 292

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
             H   + A                 +    + +              +P         +
Sbjct: 293 PEHERAIGAWA--------------LTEHGSDFVAVEGYPMAKRPFYTHP---------W 329

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           P + R++  F+L    +EL      L  P       E +   + +  +        +L  
Sbjct: 330 PGEERWSNSFDLLFRGLELVTGGQRLHRPS------EYDAAIRARGEDPAAYAP--YLQA 381

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               MP   G A+G +R    +TG  NI EV   P  
Sbjct: 382 FEHGMPPHGGFAIGLERWTARLTGVANIREVTLFPRD 418


>gi|261196496|ref|XP_002624651.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239595896|gb|EEQ78477.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 941

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 110/334 (32%), Gaps = 34/334 (10%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ + +  R       FIEI +  LQ S   E+    F  +     +  +  +
Sbjct: 271 SQSIFRIQSAVSNLFRSSLDAQGFIEIHTPKLQSSA-TESGASVFEVK-----YFTREAF 324

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 325 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEALEI 384

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           +  +          E +   +        +    L+         
Sbjct: 385 VDSVLKEIFKGIYGRYRREVNIIKNQFPHEDLVWLDETPIIPFTEGIKLLNESGW----- 439

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
                ++ G  +  ++         L E I+     +   ILD++P        +  P +
Sbjct: 440 -----RRDGEELPINEDLGTRDEIRLGELIKEKYHTD-YFILDKFPKAARPFYAMEDPEN 493

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           P FT  F+++    E+ +    + D      R       K    N      E++   +  
Sbjct: 494 PDFTNSFDIFVRGQEIVSGGQRIHDEKILEKR------MKDVGINPATM--EEY---MEG 542

Query: 316 ----MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                P  +G  +G +RL+ML+    NI      
Sbjct: 543 FRWAAPPHAGAGIGLERLIMLILKLGNIRLASLF 576


>gi|229167055|ref|ZP_04294799.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228616408|gb|EEK73489.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 437

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 113/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++++  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 129 RHERIAAIFKVKSILVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 182

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 183 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 242

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 243 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 282

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN- 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 283 TLAEAQEILKMKYRKESPEGDLDTEG-EKLLGKYVKETYNSE-FVFITHYPKEARPMYTI 340

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 341 PNKENPTITDSFDLLYKGLEITSGAQRIHNYDMLLASFKE-----KGLHPEKFQ---SYL 392

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 393 NTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 431


>gi|210620796|ref|ZP_03292247.1| hypothetical protein CLOHIR_00190 [Clostridium hiranonis DSM 13275]
 gi|210155146|gb|EEA86152.1| hypothetical protein CLOHIR_00190 [Clostridium hiranonis DSM 13275]
          Length = 495

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 103/357 (28%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+   S  +  S       +   +T   
Sbjct: 154 AHLRPRSNTFSAVFRVRSLAAYAIHKFFQERNFVYAHSPIITGSDCEGAGEMFRLTTLDM 213

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S +    +++A     ++ F   +R        H
Sbjct: 214 ENLPRTEEGKIDYSKDFFGKEANLTVSGQL-NAEIMALAFRNVYTFGPTFRAENSYTGRH 272

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E        E  M+   ++I+                    F+      + E 
Sbjct: 273 ASEFWMIEPEIVFADLEDNMELAEDMIKYIINYV----MENAPEEMQFFNSFIDKGLLER 328

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D                     ++G    +   W           I   +   
Sbjct: 329 LNNVVNSDFVRITYT-------KAIELLLESGHEFENPVEWGCDLQTEHERYITEEIYKA 381

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +  +  +L    + E+             R R ++  
Sbjct: 382 PV-FVTDYPKDIKAFYMRMNEDGKTVRAMDLLVPGVGEIVGGSQREEREDVLRARMQEMN 440

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +  E Y     +L          SG  +GF+R++M +TG +NI +VI  P +
Sbjct: 441 -----LNEEDY---WWYLELRKYGTATHSGFGLGFERIIMYMTGMSNIRDVIPFPRT 489


>gi|229069744|ref|ZP_04203029.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228713365|gb|EEL65255.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 432

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++  G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVTGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++     L+ K    +  +    +  YP     +   
Sbjct: 278 TLLEAQEILKSKYRKESPVGDLDTE--GEKLLGKYMKEIYNSEFVFITNYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 426


>gi|119945617|ref|YP_943297.1| asparaginyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166231671|sp|A1SW33|SYN_PSYIN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|119864221|gb|ABM03698.1| asparaginyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 466

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 102/358 (28%), Gaps = 45/358 (12%)

Query: 13  DFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R  +       RN +  ++  +F E  F  I +  +  S       +   ST  
Sbjct: 124 HAHLRARTNMFGAVTRVRNCLSHAMHNFFYEKGFNWISTPIITGSDAEGAGEMFRVSTLD 183

Query: 67  IIQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCL 112
           +               D   K  +L  S + + +    A   K++ F   +R        
Sbjct: 184 LENLPRNDTGAIDYKKDFFGKETFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSHTTR 242

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A        +   ++++        +             + E IT  E
Sbjct: 243 HLAEFWMVEPEIAFADLADAAQLAEDMLKYVFNAVLTERADDMAFFAQRVDK-EAITRLE 301

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                             + D        Q  G        W           +      
Sbjct: 302 KI----------VSSEFVRMDYTDAIEILQNCGKEFEFPVAWGVDLQSEHERYLAEVHVG 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               +   YP    A      AD +     ++ A  I E+        D +    RF++ 
Sbjct: 352 APVILQ-NYPKDIKAFYMKLNADGKTVAAMDVLAPGIGEIIGGSQREEDLVALDKRFDEM 410

Query: 292 MQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              K+         D  +   L        +G  +GF+RLV  VTG  NI +VI  P 
Sbjct: 411 GINKE---------DYSWYRDLRKYGTVPHAGFGLGFERLVSYVTGVQNIRDVIAFPR 459


>gi|239609470|gb|EEQ86457.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 941

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 110/334 (32%), Gaps = 34/334 (10%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ + +  R       FIEI +  LQ S   E+    F  +     +  +  +
Sbjct: 271 SQSIFRIQSAVSNLFRSSLDAQGFIEIHTPKLQSSA-TESGASVFEVK-----YFTREAF 324

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 325 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEALEI 384

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           +  +          E +   +        +    L+         
Sbjct: 385 VDSVLKEIFKGIYGRYRREVNIIKNQFPHEDLVWLDETPIIPFTEGIKLLNESGW----- 439

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
                ++ G  +  ++         L E I+     +   ILD++P        +  P +
Sbjct: 440 -----RRDGEELPINEDLGTRDEIRLGELIKEKYHTD-YFILDKFPKAARPFYAMEDPEN 493

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           P FT  F+++    E+ +    + D      R       K    N      E++   +  
Sbjct: 494 PDFTNSFDIFVRGQEIVSGGQRIHDEKILEKR------MKDVGINPATM--EEY---MEG 542

Query: 316 ----MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                P  +G  +G +RL+ML+    NI      
Sbjct: 543 FRWAAPPHAGAGIGLERLIMLILKLGNIRLASLF 576


>gi|303284531|ref|XP_003061556.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456886|gb|EEH54186.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 448

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 106/334 (31%), Gaps = 34/334 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ +    RE      F+EI +  L    G  +   A        D++ +P  L
Sbjct: 139 QAIFRVQSAVCELFREALRRKDFVEIHTPKLI---GGASEGGASV---FKLDYMGQPACL 192

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   +  + A  +++F     +R        H  EFT L+     + +   + D +
Sbjct: 193 AQSPQLYKQMAIEADMDRVFEIGPVFRAENSNTHRHLCEFTGLDMEMTIKEHYSEVLDVL 252

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           N +         + F  +    N     E +       R    +    L           
Sbjct: 253 NDLFLHMFDGLNERFKHELEVVNAQHPFEPLKYLNPTLRLTFPEGIKML----------- 301

Query: 198 YLQAQQAGIR-VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPAD 255
               Q  G+  V      S    R+L + ++     +   IL +YP           P D
Sbjct: 302 ----QDHGVEGVDPLGDLSTEQERVLGQLVKEKYDTD-FYILHKYPLNARPFYTMPCPHD 356

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
             +T  F+++    E+ +    + D      R  +   E + I        + ++     
Sbjct: 357 GDYTNSFDIFIRGEEIISGAQRIHDVELLSKRAVECGIEIETI--------QAYIDAFKY 408

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 G  +G +R+VML     NI +    P  
Sbjct: 409 GALPHGGCGVGLERVVMLFLNLGNIRKTSMFPRD 442


>gi|254524734|ref|ZP_05136789.1| asparaginyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219722325|gb|EED40850.1| asparaginyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 464

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 114/371 (30%), Gaps = 46/371 (12%)

Query: 1   MHQIPSQPWWNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F EN F  I +  +  S  
Sbjct: 109 IQPKPMSPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHENGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDEKGAIDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +  S      
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEEFLKYLFRAVLNER-SDDLAFI 286

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIF 218
               +   IT  E F               ++ D        Q++G +      W  D+ 
Sbjct: 287 AERVDKNAITKLEDF----------INAPFERIDYTDAVSLLQKSGKKFDFPVEWGLDLQ 336

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
           +       E ++G     ++  YP    A       D +             L     E+
Sbjct: 337 TEHERWLTEEHVG--RPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEI 388

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDE--DFLACLTEMPQSSGIAMGFDRLVMLVTGA 336
           +   ++  R +       +   +        DF          +G  +GF+RLV+ V G 
Sbjct: 389 IGGSQREERLDVLDARMAQFGLDREHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGL 446

Query: 337 NNINEVIWTPF 347
           +NI + I  P 
Sbjct: 447 SNIRDAIPYPR 457


>gi|145541363|ref|XP_001456370.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124424181|emb|CAK88973.1| unnamed protein product [Paramecium tetraurelia]
          Length = 563

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 62/359 (17%), Positives = 101/359 (28%), Gaps = 42/359 (11%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          RN +  +   +F  N  + I +  +  S       +   ST   
Sbjct: 215 AHLRPRGNFFSAVTRIRNNLAYATHVFFQNNGCLYIHTPIITGSDCEGAGEMFRISTIFD 274

Query: 67  --------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGC 111
                           QD  +K + L  S +   +    +    ++ F   +R  +    
Sbjct: 275 NDISKIPQIKGKVDTAQDFFKKEVNLTVSGQLQVEHFCISMS-NVYTFGPTFRAEKAHTH 333

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+     ++       Q        +     +     + 
Sbjct: 334 RHLAEFWMIEPEFAFADLFDNMEAAEGYVKFCINYILQNNID----DLQFLDKRVKPGLI 389

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEKIEPNL 230
           +      + D               + L+AQQAG +  + D  W    +      I    
Sbjct: 390 DYLKDIVSKDFVRCSYTQGID----ILLKAQQAGAKFENSDIKWGMDLNSEHERFIAEK- 444

Query: 231 GINCCTILDRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF 288
                  L  YP    A       D          L     EL               R 
Sbjct: 445 VFQRPVFLYDYPKEIKAFYMKVGTDDGKCVRAMDMLIPQVGELIGGSQREERYDVLAQRI 504

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++   + +        +D   L          G  +GF+RLVM+VTG  NI +VI  P 
Sbjct: 505 KECGLKLEDYGP---YMD---LRK-YGTVPHCGFGLGFERLVMMVTGVENIRDVIPFPR 556


>gi|187735195|ref|YP_001877307.1| asparaginyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425247|gb|ACD04526.1| asparaginyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 456

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 95/349 (27%), Gaps = 38/349 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
            H R R          R+ +  ++  +F E  F  + +  +  S       +   +T   
Sbjct: 120 AHLRPRTNLFGAVFRMRSRLAFAIHRFFQERDFSWVSTPIITASDCEGAGEMFRVTTLDV 179

Query: 65  -----ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                    +D   K  YL  S +   +    A    I+ F   +R        H  EF 
Sbjct: 180 GDATSRDASRDFFGKAAYLTVSGQLEGEAFACA-LSNIYTFGPTFRAENSNTTRHAAEFW 238

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           M+E   A       M      +R           +         +      + E      
Sbjct: 239 MVEPEMAFCDLYGDMDMAEEFVRFLV----GDALANSAEEVEFLTRFVDKGLRERLEHV- 293

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
                       +           ++G    +  +W           +       C  I+
Sbjct: 294 ------KETPFVRCSYTEAVDILLKSGKTFDYPVSWGINLQSEHERFLTEEH-FKCPVIV 346

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKK 296
             YP          P   R  +  +       L     E++   ++  R +  +E     
Sbjct: 347 YNYPKEI------KPFYMRLNEDGKTVTAMDVLVPGIGEIVGGSQREERLDILEENMRSM 400

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            +  E Y    D           +G   GF+RL+M VTG  NI +V+  
Sbjct: 401 GMNAEAYRWYADLRR--YGTVPHAGFGAGFERLLMFVTGVTNIRDVLPF 447


>gi|289804400|ref|ZP_06535029.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 167

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 3/167 (1%)

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
            +P   D+  L   A +  +    D  +    +   +    +EP++G    T +  +PA 
Sbjct: 1   MDPLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYHFPAS 60

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           +++LA I   D R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++        P
Sbjct: 61  QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQP 120

Query: 305 IDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ID++ L  L   +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 121 IDQNLLDALAAGLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA 167


>gi|328955952|ref|YP_004373285.1| asparaginyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456276|gb|AEB07470.1| asparaginyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 467

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 111/357 (31%), Gaps = 38/357 (10%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE------THIR 60
             H R R          R++  +++  +F E  F+ +++  +  +           T I 
Sbjct: 122 QQHLRPRTNLFRAVFRIRSVTAAAIHRFFQERGFVYVNTPIITANDAEGAGEMFHVTTID 181

Query: 61  AFSTELIIQDHIR--KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
             +  L     I   K  +     L  S + + +    A    ++ F   +R        
Sbjct: 182 PMNPPLSPNGEIDWSKDFFGVPASLTVSGQLNAENFAMA-FGDVYTFGPTFRAENSNTAR 240

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       M     +++        ++           +      + E
Sbjct: 241 HAAEFWMVEPEMAFADLADDMDLAEQMLK----FLISEVQRLCPDELAMLNRFVDKGLME 296

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
             +  A     +T           +   A +AG    +  +W           +      
Sbjct: 297 RLSHVA----ASTFARVTYTRAIEILQAAVEAGENFEYPVSWGIDLQTEHERYLTERH-F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
              T +  YPA   A       D +     +     I       E++   ++  R ++  
Sbjct: 352 KRPTFVSDYPAQIKAFYMRMNDDGKTVAAMDCLVPGI------GEIIGGSQREERLDRLE 405

Query: 293 QEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +    +  +       +L        + +G  +GF+R+VM +TG +NI +V+  P +
Sbjct: 406 RRIADLGMDAEQY-RPYLDLRRYGTNRHAGFGLGFERMVMYLTGVSNIRDVLPHPRT 461


>gi|311263597|ref|XP_003129750.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Sus scrofa]
          Length = 477

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 102/349 (29%), Gaps = 38/349 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R       L  R+   +++  +F ++ F+ I +  +  +       +  F  E   
Sbjct: 144 HLRCRTNVLGSILRVRSEATAAVHSFFKDSGFVHIHTPVITSNDCEGAGEL--FQVEPSS 201

Query: 69  ------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                 ++    P +L  S +    ++++    ++F F   +R        H  EF M+E
Sbjct: 202 KIKVPDENFFSVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQTRRHLAEFYMVE 260

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +     Q +   M  +   A  A           C+ F  P      E   ++    
Sbjct: 261 AEISFLESLQDLMQVMEGLFKTATRAVLASCQEDVELCHKFIAPGQKDRLEHMLKH---- 316

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                 N             +QA         W         + +  + G      +  Y
Sbjct: 317 ------NFLVISYTEAVEILKQASENFTFTPEWGADLHTEHEKYLVKHCGDIPV-FVINY 369

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR--FEKEMQEKKKIY 299
           P            D        +      L     EL     +  R  F ++   +    
Sbjct: 370 PLSLKPFYMRDNEDGPRHTVAAV----DLLVPGVGELFGGSLREERYHFLEQRLAR-LGL 424

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            E Y     +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 425 QEAYQ---WYLDLRRFGSVPHGGFGMGFERYLQCILGIDNIKDVIPFPR 470


>gi|299538659|ref|ZP_07051942.1| asparaginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298726246|gb|EFI66838.1| asparaginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 431

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 106/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    ++   +  RN I  +  E+F  N F ++D   L   +P   + +  F
Sbjct: 115 MDNRHLWLRSR--KQHAIMKIRNEIIRATYEFFNNNGFTKMDPPILTGSAPEGTSEL--F 170

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 171 HTK-----YFDEDAYLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E+ ++     +    +                      +   +        D
Sbjct: 225 PEMAFVEFEENLEVQEQYVAHIVQSV--------------------LANCKLDLERLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             T  +      R       +    +   D  W D F       I      +    +  Y
Sbjct: 265 TSTLENIKAPFPRISYDDAIKLLHEQGFDDIEWGDDFGAPHETAIA--NSFDKPVFITCY 322

Query: 242 PA-PESALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P   +      +P         +L A     E+    + + D    + R E+        
Sbjct: 323 PVGIKPFYMQPHPDRDDVVLCADLIAPEGYGEIIGGSERIHDYDLLKSRLEEHNLSLDAY 382

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                     +L          SG  +G +R V  ++G  +I E I  P  
Sbjct: 383 --------AWYLELRKHGSVPHSGFGLGLERTVAWISGTEHIRETIPFPRL 425


>gi|119502780|ref|ZP_01624865.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119461126|gb|EAW42216.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 465

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 104/358 (29%), Gaps = 45/358 (12%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R+++  ++ EYF    F  +++  +  S       +   ST  
Sbjct: 125 QAHLRTRTNTFGAITRVRHVLARAIHEYFHRQDFYWVNTPIITASDCEGAGELFRVSTLD 184

Query: 67  IIQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
                           D      +L  S + + +    +   +++ F   +R        
Sbjct: 185 YANLPRNPDGSVDHSQDFFGSEAFLTVSGQLAVESHCLSMS-RVYTFGPTFRAENSNTTR 243

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A             ++R        ++      +   F +    +V +
Sbjct: 244 HLAEFWMVEPEIAFADLNDNAALAEGLLRH----VIAEVLEHCADDMAFFQQRIDKSVLQ 299

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                     G    N ++          +  G        W    +      +     +
Sbjct: 300 RLQ-------GIVDSNFERMTYSEAIAILENCGQSFEFPVHWGIDMASEHERYLAEEH-V 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               ++  YP+   A       D +             L     E++   ++  R +   
Sbjct: 352 GRPIVVTDYPSDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLD--- 402

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +   ++    D  +   L        +G  +GF+RL+  +TG  N+ +VI  P +
Sbjct: 403 -VLEGRMDQAVLEDLWWYRDLRRYGTVPHAGFGLGFERLLAYITGMENVRDVIPFPRT 459


>gi|291326404|ref|ZP_06124357.2| asparagine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314408|gb|EFE54861.1| asparagine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 472

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 110/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  +  + +  +  S       +   ST   
Sbjct: 131 AHLRPRTNLIGAVARVRHTLAQAIHRFFDEQGYFWVSTPVITASDTEGAGEMFRVSTLDY 190

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 191 NNLPRDDKGEVDFSEDFFGREAFLTVSGQLNGEAYATAIS-KVYTFGPTFRAENSNTSRH 249

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  S + +      +++ A + A ++    +  +   F++     V   
Sbjct: 250 LAEFWMVEPEVAFASLDDVAGLAEKMLKFAFKAALEE----RRDDLEFFAQRVDKDVINR 305

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D           D        +  G +  +   W    S      +       
Sbjct: 306 LESFVNSDFAQV-------DYTDAIKILETCGQKFENPVYWGVDMSSEHERYLAEQHFKA 358

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R E+  
Sbjct: 359 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDMLDARLEEMG 417

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RLV  VTG  N+ EVI  P +
Sbjct: 418 MNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLVAYVTGVGNVREVIPFPRT 466


>gi|225405476|ref|ZP_03760665.1| hypothetical protein CLOSTASPAR_04696 [Clostridium asparagiforme
           DSM 15981]
 gi|225042998|gb|EEG53244.1| hypothetical protein CLOSTASPAR_04696 [Clostridium asparagiforme
           DSM 15981]
          Length = 485

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  I    R+Y +   F EI +   +       ++       +   D+ 
Sbjct: 177 RNLRERAKFKIQEGIVRGFRDYLLGQGFTEIRTPKIVARGAEGGSN-------VFKLDYF 229

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            K   L  SP+F  K+ +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 230 GKKAELGQSPQFY-KQTMVGVYDRVFEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDGFE 288

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            + D    +         + +  +                        + L      P  
Sbjct: 289 DIMDMETGMLQFVMGLLGREYKKE-------------------LDLLGVTLPDVSRIPAV 329

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  L A++   ++ +          ++    +   G +    +  YP+ +     +
Sbjct: 330 RFDRAKELAAEKYHRKIRNPYDLEPEEELLIGRYFKEEYGSD-FVFVTHYPSKKRPFYAM 388

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               DP++T  F+L    +E+      + D  E   + E     K+ +  E       +L
Sbjct: 389 DDPADPKYTLSFDLLFKGLEVTTGGQRIHDYGEILRKME-----KRGMDPEDI---ASYL 440

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G+ +G +RL M +    N+ E    P  
Sbjct: 441 MIFKYGMPPHGGLGIGLERLTMRLLDEQNVRETALFPRD 479


>gi|163939992|ref|YP_001644876.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163862189|gb|ABY43248.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 432

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 49/339 (14%), Positives = 110/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  + +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFGEFLIENDFTRVFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFINDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVGETC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQDILKNKYRKESQIGDLDTEG-EKLLGKYVKETYNSE-FVFITHYPKESRPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K+K  +      + ++
Sbjct: 336 PNKENEAITDSFDLLYKGLEITSGAQRIHNHEMLLASF------KEKGLHPDKF--QSYV 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERVVYKLLELSNVREASAFPRD 426


>gi|190575044|ref|YP_001972889.1| asparaginyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190012966|emb|CAQ46598.1| putative 2 asparaginyl-tRNA synthetase [Stenotrophomonas
           maltophilia K279a]
          Length = 464

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/371 (17%), Positives = 114/371 (30%), Gaps = 46/371 (12%)

Query: 1   MHQIPSQPWWNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F EN F  I +  +  S  
Sbjct: 109 IQPKPMSPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHENGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDEKGAIDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +  S      
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEEFLKYLFRAVLNER-SDDLAFI 286

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIF 218
               +   IT  E F               ++ D        Q++G +      W  D+ 
Sbjct: 287 AERVDKNAITKLEDF----------INAPFERIDYTDAVSLLQKSGRKFDFPVEWGLDLQ 336

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
           +       E ++G     ++  YP    A       D +             L     E+
Sbjct: 337 TEHERWLTEEHVG--RPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEI 388

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDE--DFLACLTEMPQSSGIAMGFDRLVMLVTGA 336
           +   ++  R +       +   +        DF          +G  +GF+RLV+ V G 
Sbjct: 389 IGGSQREERLDVLDARMAQFGLDREHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGL 446

Query: 337 NNINEVIWTPF 347
           +NI + I  P 
Sbjct: 447 SNIRDAIPYPR 457


>gi|228900806|ref|ZP_04065021.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL
           4222]
 gi|228858732|gb|EEN03177.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis IBL
           4222]
          Length = 419

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 110/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 111 RHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 164

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 165 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 224

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 225 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPVITEIPKI 264

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 265 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 322

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 323 QNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASFKE-----KGLHPEKFQ---SYL 374

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 375 NTFRYGCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 413


>gi|75764079|ref|ZP_00743678.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488433|gb|EAO52050.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 437

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 110/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 336 QNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASFKE-----KGLHPEKFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|228920928|ref|ZP_04084266.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228838717|gb|EEM84020.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 432

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 111/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEVLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           +  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 REAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKKC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +  +       ++L + ++          +  YP     +   
Sbjct: 278 TLLE-AQEILKSKYRKESPVEDLDTEGEKLLGKYVKEIYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 336 PNKENPSITDSFDLLYKGLEITSGAQRIHNHEMLLASFKE-----KGLHPEKFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 426


>gi|218897182|ref|YP_002445593.1| aspartyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218544808|gb|ACK97202.1| aspartyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 432

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 110/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 336 QNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASFKE-----KGLHPEKFQ---SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 426


>gi|322411433|gb|EFY02341.1| asparaginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 448

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 67/350 (19%), Positives = 114/350 (32%), Gaps = 37/350 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    R+   +  RN I  +  E+F +N FI+ DS  L    GN       +
Sbjct: 125 MDNRHLWLRSR--RQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILS---GNAAEN---T 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P +L  S +   +  + A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGNPAFLSQSGQLYLEAGMMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                S+E+ +      ++   +                 ++     +AE F R A  D 
Sbjct: 236 EYPFLSHEESLDLQEAYVKAMIQGVLD-RAPQALETLERDTDLLKKYIAEPFKRVAYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            + L      +                      D F       I    G+   T +  YP
Sbjct: 295 ISLLQEHASDEDADYEAI------------QHGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +       +L            E++       R     +   KI  E
Sbjct: 341 ASFKAFYMKPVPGNEERVLCADL-----LAPEGYGEIIGGS---ERETDYNKLLAKIEEE 392

Query: 302 TYPIDE--DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D+   +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 393 GLNPDDYAFYLDLRKYGSVPHCGFGLGLERMVTFVAGTKHIREAIPFPRM 442


>gi|228965182|ref|ZP_04126276.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228794416|gb|EEM41928.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 428

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 110/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 120 RHERTAAIFKVKSTLVQSFSEILIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 173

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 174 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 233

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 234 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPVITEIPKI 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 274 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 332 QNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASFKE-----KGLHPEKFQ---SYL 383

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 384 NTFRYGCPPHGGFGIGLERIVYKLLELTNVREASAFPRD 422


>gi|26338383|dbj|BAC32877.1| unnamed protein product [Mus musculus]
          Length = 477

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 102/360 (28%), Gaps = 37/360 (10%)

Query: 2   HQIPSQPWWN-RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE 56
           H +  +          R       L  R+   +++  YF +N F+ I +  L  +     
Sbjct: 134 HPL--EYLRQYPHLRCRTNALGSILRVRSEATAAIHSYFKDNGFVHIHTPVLTSNDCEGA 191

Query: 57  THIRAFSTELII------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
             +  F  E         +     P +L  S +    ++++    ++F F   +R     
Sbjct: 192 GEL--FQVEPSSKIKGPKESFFDVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQ 248

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   +     Q +   M  +  A               C+ F       
Sbjct: 249 SRRHLAEFYMVEAEISFVESLQDLMQVMEELFKATTEMVLSHCPEDVELCHQFIAAGQKG 308

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             E   +          +N             +QA    A    W         + +  +
Sbjct: 309 RLEHMLK----------NNFLIISYTEAIEILKQASQNFAFTPKWGVDLQTEHEKYLVRH 358

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
            G      +  YP+           D        +      L     EL     +  R+ 
Sbjct: 359 CGNIPV-FVINYPSELKPFYMRENEDGPQNTVAAV----DLLVPGVGELFGGSLREERYH 413

Query: 290 -KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             E +  +    + Y     +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 414 VLEQRLARSGLTKAYQ---WYLDLRKFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 470


>gi|320536685|ref|ZP_08036697.1| asparaginyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146467|gb|EFW38071.1| asparaginyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 473

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 108/366 (29%), Gaps = 55/366 (15%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE--------- 56
            H R R          RN +  ++  +F E+ F  + +  +  S      E         
Sbjct: 124 AHLRARTNTFGAVARMRNQMSFAVHSFFQEHGFQYVHTPIITGSDCEGAGEMFHVTTLNI 183

Query: 57  -----------THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                      T+   F+ +   QD   K   L  S +   +    A   +++ F   +R
Sbjct: 184 QEIVQKALKEKTNPETFAVDYT-QDFFGKEANLTVSGQLELETYATA-LSRVYTFGPTFR 241

Query: 106 NGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                   H  EF M+E   +    EQ M      +    + A +K              
Sbjct: 242 AENSNTTRHLSEFWMIEPEMSFFHLEQTMDMAEQFVVHLLKWALEKCR------------ 289

Query: 165 PEYITVAEAFARYANIDLGTTL--DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
            E +   ++  +   ID+ T +      +          ++          W        
Sbjct: 290 -EDLAFFDSRIKNGLIDMLTKVVTTPFTRITYTEAVALLEKNKSAFEFTPYWGCDLQTEH 348

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +   +      I+  YP    A       D +  +  ++    +       E  D  
Sbjct: 349 ERYLTETVFKGPV-IVTDYPKEIKAFYMKMNEDGKTVRAMDVLVPYLGEIIGGSEREDNY 407

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
               +   E+   K+ Y         +L          SG  +GFDRL++ VTG  NI +
Sbjct: 408 AALEKRINELGLAKENY-------WWYLDLRKYGTVPHSGFGLGFDRLLLYVTGMGNIRD 460

Query: 342 VIWTPF 347
           VI  P 
Sbjct: 461 VIPFPR 466


>gi|229161185|ref|ZP_04289172.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228622281|gb|EEK79120.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 432

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       +  +  S  EY  EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKATLAQSFSEYLTENDFTRIFTPKIVSQ-GAEGGANVFKVP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R  +     H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEQHNSSRHLNEYISLDVEIGFINDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRHMFQQVVKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQEILKNKYHKESPVGDLDTEG-EKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + D       F +     K +++E +     ++
Sbjct: 336 PNKENTAVTDSFDLLYKGLEITSGAQRIHDYNMLLTSFNE-----KGLHSEKFQ---SYV 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 DTFRYGCPPHGGFGIGLERVVYKLLQLSNVREASAFPRD 426


>gi|327393352|dbj|BAK10774.1| asparaginyl-tRNA synthetase AsnS [Pantoea ananatis AJ13355]
          Length = 466

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +   +A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDYSEDFFGKEAFLTVSGQLNGETYASA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  S +        +++   +    +    +  +   F+E         
Sbjct: 244 LAEFWMLEPEIAFASLDDAAALAEAMLKYVFKAVLDE----RADDMAFFAERVDNDAINR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D           G    +  +W    S      +       
Sbjct: 300 LERFVTTDFAQV-------DYTDAVDILMNCGQTFENPVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R E+  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLEEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LKKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|297804454|ref|XP_002870111.1| hypothetical protein ARALYDRAFT_914989 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315947|gb|EFH46370.1| hypothetical protein ARALYDRAFT_914989 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 567

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 103/368 (27%), Gaps = 54/368 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  +  ++F E+ F+ + S  +  S           +T + 
Sbjct: 215 AHLRPRTNTFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGAGEQFCVTTLIP 274

Query: 68  IQ-----------------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
                                    D   KP +L  S + + +    A    ++ F   +
Sbjct: 275 SSHENTDTSIDAIPKTKGGLIDWSQDFFGKPAFLTVSGQLNGETYATA-LSDVYTFGPTF 333

Query: 105 RNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R        H  EF M+E   A    +  M      ++   +                  
Sbjct: 334 RAENSNTSRHLAEFWMIEPELAFADLDDDMACATAYLQYVVKYVLDNCKEDMEFFDTWIE 393

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
           +     +++   +              Q           +A  +      W         
Sbjct: 394 KGIIRRLSDVAEK-----------EFLQLGYTDAIEVLLKANRKFDFPVKWGLDLQSEHE 442

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             I          I+  YP    A       D +     ++    I       EL+   +
Sbjct: 443 RYITEEAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDMLVPRI------GELIGGSQ 496

Query: 284 QRHRFEKEMQEKK--KIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +  R E         K+  E+Y     +L          +G  +GF+RLV  VTG +NI 
Sbjct: 497 REERLEVLEARLDELKLNKESY---WWYLDLRRYGSVPHAGFGLGFERLVQFVTGIDNIR 553

Query: 341 EVIWTPFS 348
           +VI  P +
Sbjct: 554 DVIPFPRT 561


>gi|315222919|ref|ZP_07864798.1| asparaginyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315187869|gb|EFU21605.1| asparaginyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 440

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 116/351 (33%), Gaps = 39/351 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   +  RN I  +  E+F  N FI+ DS  L  +   ++      
Sbjct: 117 MDHRHLWLRSR--KQMAIMQIRNAIIYASYEFFDRNGFIKFDSPILSGNAAEDS------ 168

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 169 TELFETDYFGTPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 227

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                ++++ +      ++   +                  E     VAE F R +  ++
Sbjct: 228 EYPFVTHDESLNLQEAYVKALIQGVLD-RAPHALEVLERDIELLKKYVAEPFKRISYDEV 286

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L   +  +                      D F       I    G+   T +  YP
Sbjct: 287 IDLLQEHENDEDAE------------YEHIERGDDFGSPHETWISNYFGV--PTFVVNYP 332

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--- 298
           A  ++      P +       +L            E++    +   +EK + + ++    
Sbjct: 333 ASFKAFYMKPVPGNEERVLCADL-----LAPEGYGEIIGGSAREESYEKLLAKIEENGLN 387

Query: 299 -YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +  + +D   L         +G  +G +R+V  V G  +I E I  P  
Sbjct: 388 SDDYAFYLD---LRK-YGSVPHAGFGLGLERMVTFVAGTKHIREAIPFPRM 434


>gi|295136357|ref|YP_003587033.1| asparaginyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294984372|gb|ADF54837.1| asparaginyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 480

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/378 (15%), Positives = 117/378 (30%), Gaps = 46/378 (12%)

Query: 5   PSQPWWNR---DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R       +  R+ +  ++  YF +N F  +++  +  S    
Sbjct: 109 PKRHSLEKLREQAHLRVRTNTFGAIMRVRSKLSFAVHSYFQQNNFYYVNTPIITGSDAEG 168

Query: 56  ETHIRAFSTELIIQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
              +  F                      D   K   L  S +   +        +I+ F
Sbjct: 169 AGEM--FKVTNFDLKNPPKNEDGSIDYKKDFFGKETNLTVSGQLEGETYALG-LGQIYTF 225

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A    +  M    + I+       +          
Sbjct: 226 GPTFRAENSNTSRHLAEFWMIEPEIAFCDLDGNMDLAEDFIKYVVSYVLENCKDDLEFLE 285

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTL--------DNPDQPDRHLLYLQAQQAGIRVAHD 211
              +  +    A   +    I+    +           +  D        ++   +   +
Sbjct: 286 QRLANEDKAKPAAERSEMGLIEKLKFVLENNFKRVSYTEAIDILKDSKPNKKKKFKYIIE 345

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
           +  +D+ S      +E +    C  IL  YPA   A       D +  +  ++    I  
Sbjct: 346 EWGADLQSEHERYLVEKH--FKCPVILFDYPAKIKAFYMRLNEDGKTVRAMDILFPGI-- 401

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
                E++   ++  R +   ++  ++  E   +   +L          SG  +GF+RLV
Sbjct: 402 ----GEIVGGSQREERLDVLKEKMAELGIEEKEL-WWYLDTRKFGTCVHSGFGLGFERLV 456

Query: 331 MLVTGANNINEVIWTPFS 348
             VTG  NI +VI  P +
Sbjct: 457 QFVTGMGNIRDVIPFPRT 474


>gi|145519962|ref|XP_001445842.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413308|emb|CAK78445.1| unnamed protein product [Paramecium tetraurelia]
          Length = 557

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 101/360 (28%), Gaps = 45/360 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  +   +F  N  + I +  +  S          F    I
Sbjct: 210 AHLRPRSNFFGAVTRIRNNLAYATHVFFQNNGCLYIHTPVITGSDCEGAG--DMFKVTTI 267

Query: 68  IQDHIR------------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-Q 109
             + ++            +  +     L  S +   +    +    ++ F   +R  +  
Sbjct: 268 FDNDLQKVPQLNGKVDVTQDFFKKETKLTVSGQLQVENFCVSMS-NVYTFGPTFRAEKAH 326

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   A       M+     ++           ++   N     E     
Sbjct: 327 THRHLAEFWMIEPEFAFADLFDNMEAAEGYVKFC--------INYILANNYDDLEFLNKR 378

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEP 228
           V +    Y    +              + L AQQAG +  +    W    +      +  
Sbjct: 379 VKQGLIDYLKDIVSKEFIKCSYTQGIEILLNAQQAGAKFENSKIEWGMDLNSEHERFLAE 438

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHR 287
                    +  YP    A       D +  +  + L     EL               R
Sbjct: 439 K-VFQRPVFIYDYPKEIKAFYMKVAEDGKCVRAMDMLVPQVGELIGGSQREERYDVLAQR 497

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +       +  E Y    D           SG  +GF+RLVM++TG  NI +VI  P 
Sbjct: 498 ITE-----CGLKLEVYRPYLDLRR--YGTVPHSGFGLGFERLVMMITGVENIRDVIPFPR 550


>gi|168177968|ref|ZP_02612632.1| asparaginyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670812|gb|EDT82786.1| asparaginyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 463

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 103/357 (28%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+  ++  +  S       +   +T   
Sbjct: 122 AHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDL 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D    P  L  S + S +    A    ++ F   +R        H
Sbjct: 182 NNIPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALA-FRNVYTFGPTFRAENSNTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       + +  ++++                    F+      + + 
Sbjct: 241 ASEFWMIEPEMAFAELTDYLDNAEDMVKFVINYV----MENAPEEMAFFNSFVDKGLFDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D                    Q++G +  ++  W           +   +   
Sbjct: 297 LDNVVNSDFKRITYTE-------AVELLQKSGAKFDYEVEWGIDLQTEHERYLTEQIFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +     +L    + E+               R E+  
Sbjct: 350 PV-FVTDYPKDIKAFYMRLNDDGKTVAAADLLVPGVGEIIGGSQREERLDVLEKRMEELN 408

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+            +L        + SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 409 LNKEDY--------WWYLELRKYGETKHSGYGLGFERILMYITGMTNIRDVIPFPRT 457


>gi|215447936|ref|ZP_03434688.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289759756|ref|ZP_06519134.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis T85]
 gi|289715320|gb|EFD79332.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis T85]
          Length = 249

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 98/253 (38%), Gaps = 14/253 (5%)

Query: 105 RNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
           RN      H       + Y+ + +Y+        +I+  A+ A                +
Sbjct: 1   RNEGADSTHLRNSPWWKTYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLPDGSVYDID 60

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH------DDTWSDIF 218
            E+ T+      Y ++ +    +   Q     L   A   G+                + 
Sbjct: 61  GEWATIQ----MYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLI 116

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
             +    +  +  ++  T +  +P   + L   + + P  T++++LY   IEL     EL
Sbjct: 117 EELWERTVGKS--LSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYSEL 174

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            DP+ QR RF  + +      +ET  +DEDFLA L   MP  +G  MG DRL+M +TG  
Sbjct: 175 SDPVVQRERFADQARAAAAGDDETMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTGL- 233

Query: 338 NINEVIWTPFSQS 350
           +I E +  P  + 
Sbjct: 234 SIRETVLFPIVRP 246


>gi|332704184|ref|ZP_08424272.1| Asparaginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332554333|gb|EGJ51377.1| Asparaginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 460

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/354 (14%), Positives = 111/354 (31%), Gaps = 39/354 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRA 61
            H R R          R+    ++ +YF  N +  + +  +  +      E    T +  
Sbjct: 121 AHLRPRTNKFGALFRIRSEAAFAVHDYFRRNGYFYVQTPIITGADCEGAGEMFRVTTLDP 180

Query: 62  FSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
            + +   ++      +     L  S + S +    +   K++ F   +R        H  
Sbjct: 181 STGKPAAENPFEGDFFGRGAHLTVSGQLSAEVFACS-LGKVYTFGPTFRAENSNTPRHAA 239

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A       M    + ++   +       +    + + F++     +A    
Sbjct: 240 EFWMIEPEVAFADLGDNMDLAEDFLKSLIDHV----RTHCAADLDLFAKFVDKDLA---- 291

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
             A++D          P    +    +++G +                  +         
Sbjct: 292 --ASLDNIMAKPFVRLPHGESIQ-ILKKSGKQFDFPVQDGMDLQTEHERYLTEEH-FKRP 347

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            I+  YP    A       D +     ++    +       E++   ++  R +   +  
Sbjct: 348 VIVYDYPKEIKAFYMRLNDDGKTVAAMDVLLPRV------GEIIGGSQREERLDVLERRI 401

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++  +       +L          +G  MGF+R +M+VTG  NI +VI  P +
Sbjct: 402 GELGLDMSCY-WWYLELRKFGSVPHAGFGMGFERFLMMVTGVTNIRDVIPFPRT 454


>gi|319939057|ref|ZP_08013421.1| asparaginyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319812107|gb|EFW08373.1| asparaginyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 448

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 116/349 (33%), Gaps = 35/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   +  RN I  +  E+F  N FI+ DS  L  +   ++      
Sbjct: 125 MDHRHLWLRSR--KQMAIMQIRNAIIYASYEFFDRNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGTPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                ++++ +      ++   +                 ++     VAE F R +  ++
Sbjct: 236 EYPFVTHDESLDLQEAYVKALIQGVLD-RAPHALEVLERDTDLLKKYVAEPFKRISYDEV 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L   +  +                      D F       I    G+   T +  YP
Sbjct: 295 IDLLQEHENDEEAE------------YEHIERGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +       +L            E++    +   +EK + + ++    
Sbjct: 341 ASFKAFYMKPVPGNEERVLCADL-----LAPEGYGEIIGGSAREESYEKLLAKIEENGL- 394

Query: 302 TYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             P D  F   L        +G  +G +R+V  V G  +I E I  P  
Sbjct: 395 -NPDDYAFYLDLRKYGSVPHAGFGLGLERMVTFVAGTKHIREAIPFPRM 442


>gi|124505695|ref|XP_001350961.1| aspartyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
 gi|23510604|emb|CAD48989.1| aspartyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
          Length = 626

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 105/334 (31%), Gaps = 32/334 (9%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
               +++I    R + +++ F+EI +   L  S     +           ++  +  YL 
Sbjct: 313 IFSLQSVICHIFRTFLLQHNFVEIHTPKLLGESSEGGANA-------FKINYFNQNGYLA 365

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQLMKDCM 137
            SP+   +  + +G +K+F     +R        H  E+  L+    +   Y + +    
Sbjct: 366 QSPQLYKQMCINSGFDKVFEVGPVFRAENSNTYRHLCEYVSLDIEMTYKFDYMENVHFYD 425

Query: 138 NIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +   +   N +               +     +    +            ++  + L
Sbjct: 426 SMFKHIFKELTNNEKNKTFIKTIKNQYPSDDFVWLDKTPIFTY----------EEAIKIL 475

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
           +                 +    + L + I+ +   +   I+  +P+            D
Sbjct: 476 IKNGKLFLKEEDILTYDLTTDLEKELGKLIKLSHNTD-YYIIINFPSSLRPFYTMYKEDD 534

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P+ +  ++ +    E+ +    + D        +    +  K+          ++     
Sbjct: 535 PKISNSYDFFMRGEEILSGSQRISDMKLLLENIKLFNLDPNKLN--------FYIDSFAY 586

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                SG  +G +R++ML  G NNI +    P  
Sbjct: 587 SSYPHSGCGIGLERVLMLFLGLNNIRKTSLFPRD 620


>gi|254516796|ref|ZP_05128854.1| asparaginyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219674301|gb|EED30669.1| asparaginyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 465

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 102/359 (28%), Gaps = 47/359 (13%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R+ + +++  YF +N F  +++  +  S       +  F    
Sbjct: 125 QAHLRPRTNTFGAITRVRHCLANAIHSYFHDNGFYWVNTPIITGSDCEGAGEL--FRVST 182

Query: 67  IIQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
           +  +                     YL  S + + +    +   K++ F   +R      
Sbjct: 183 LDMNNIPRAADGSVDYGQDFFGGDAYLTVSGQLAVESYCLSMS-KVYTFGPTFRAENSNT 241

Query: 112 -LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF M+E   A            ++++        +                 I  
Sbjct: 242 SRHLAEFWMIEPEVAFADLADNADLAESLLKHVFGRVLNECEDDLAFFNQ------RIDD 295

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                  A +D      N ++ D        + +G +      W    +      +    
Sbjct: 296 TVLTRLAAMVDQ-----NFERMDYSEAIKILKASGQKFEFPVEWGVDLASEHERYLCEQH 350

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFE 289
            +    +L  YP    A       D +     ++ A  I E+               R +
Sbjct: 351 -VGRPVVLMNYPREIKAFYMRLNDDEKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMD 409

Query: 290 KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +++         +  D             +G  +GF+RL+  VTG  N+ + I  P +
Sbjct: 410 PQLR-----DELWWYRDLR----RYGTVPHAGFGLGFERLINYVTGMENVRDAIPFPRT 459


>gi|251782082|ref|YP_002996384.1| asparaginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390711|dbj|BAH81170.1| asparaginyl-tRNA synthetase AsnS [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323126943|gb|ADX24240.1| asparaginyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 448

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 67/350 (19%), Positives = 114/350 (32%), Gaps = 37/350 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    R+   +  RN I  +  E+F +N FI+ DS  L    GN       +
Sbjct: 125 MDNRHLWLRSR--RQAAIMQIRNAIIYASYEFFDQNGFIKFDSPILS---GNAAEN---T 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P +L  S +   +  + A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGNPAFLSQSGQLYLEAGMMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                S+E+ +      ++   +                 ++     +AE F R A  D 
Sbjct: 236 EYPFLSHEESLDLQEAYVKAMIQGVLD-RAPQALETLERDTDLLKKYIAEPFKRVAYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            + L      +                      D F       I    G+   T +  YP
Sbjct: 295 ISLLQEHASDEDADYEAI------------QHGDDFGSPHETWISNYFGV--PTFVVNYP 340

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +       +L            E++       R     +   KI  E
Sbjct: 341 ASFKAFYMKPVPGNEERVLCADL-----LAPEGYGEIIGGS---ERETDYNKLLAKIEEE 392

Query: 302 TYPIDE--DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D+   +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 393 GLNPDDYAFYLDLRKYGSVPHCGFGLGLERMVTFVAGTKHIREAIPFPRM 442


>gi|60683235|ref|YP_213379.1| asparaginyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81313713|sp|Q5L8W2|SYN_BACFN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|60494669|emb|CAH09470.1| asparaginyl-trna synthetase [Bacteroides fragilis NCTC 9343]
          Length = 467

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 109/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDANGSIVYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    ++ M      I+     A            + F +         
Sbjct: 242 LAEFWMIEPEVAFNEIQENMDLAEEFIKYCVRWALDNCADDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +     +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLEGVLKEDFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERYLVEDH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSERESDYNKLMTRIEEM 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG +NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRT 461


>gi|226947851|ref|YP_002802942.1| asparagine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226843596|gb|ACO86262.1| asparagine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 463

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 103/357 (28%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+  ++  +  S       +   +T   
Sbjct: 122 AHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDL 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D    P  L  S + S +    A    ++ F   +R        H
Sbjct: 182 NNIPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALA-FRNVYTFGPTFRAENSNTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       + +  ++++                    F+      + + 
Sbjct: 241 ASEFWMIEPEMAFAELTDYLDNAEDMVKFVINYV----MENAPEEMAFFNSFVDKGLFDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D                    Q++G +  ++  W           +   +   
Sbjct: 297 LDNVVNSDFKRITYTE-------AVELLQKSGAKFDYEVEWGIDLQTEHERYLTEQIFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +     +L    + E+               R E+  
Sbjct: 350 PV-FVTDYPKDIKAFYMRLNDDGKTVAAADLLVPGVGEIIGGSQREERLDVLEKRMEELN 408

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+            +L        + SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 409 LNKEDY--------WWYLELRKYGETKHSGYGLGFERILMYITGMTNIRDVIPFPRT 457


>gi|220918011|ref|YP_002493315.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955865|gb|ACL66249.1| asparaginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 434

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/345 (18%), Positives = 113/345 (32%), Gaps = 39/345 (11%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W R    R++  L  R+ ++ ++R++F +  F  +D+     S    T     ST  
Sbjct: 120 RHLWLRS--QRQQVILRVRHTVEKAIRDFFDQRGFTLVDAPIFTPSACEGT-----STLF 172

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
            +        YL  S +    +  A    K++CF   +R  +     H  EF M+E   A
Sbjct: 173 EVPYFDLGKAYLTQSGQLYM-EAAAMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVA 231

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
           +   +  M+     +    + A +K               E  TV E           + 
Sbjct: 232 YMDLDGDMELMEQFVSYVVQTALEKH------------RVELATVLERDV--------SK 271

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           L+N   P   + Y +A +   +  H   W D         +      +   ++ RYPA  
Sbjct: 272 LENVKAPFPRITYTEAVEVIQKAGHPMKWGDDIGGDEETVVARQ--FDRPVMVHRYPAEM 329

Query: 246 -SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            +      PADP+             L       +    QR      ++     +     
Sbjct: 330 KAFYFKKDPADPKVA------LGCDVLAPEGYGEIIGGGQREDDLATLEAAIDHHQLPKQ 383

Query: 305 IDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E +L          +G  MG +R V  + G +++ E I     
Sbjct: 384 AFEWYLDLRRYGTVPHAGFGMGVERCVAWICGLHHVRETIPFARM 428


>gi|168020322|ref|XP_001762692.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686100|gb|EDQ72491.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 493

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/368 (13%), Positives = 101/368 (27%), Gaps = 47/368 (12%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R+ +  +   +F  N F+ + +  +  S       +   +T  
Sbjct: 133 QLHLRARTNTISAVARIRHALAVATHTFFDRNGFMWVHTPIITTSDCEGAGEMFQVTTLF 192

Query: 67  IIQDHIRKPL-----------------------YLQTSPEFSCKKLLAAGEEKIFCFAHA 103
              +   + L                       +L  S +   +    A    ++ F   
Sbjct: 193 SETERRDRDLKPGMPRKEGGEVDFGADFFARQAFLTVSGQMQVEMYACA-LSNVYTFGPT 251

Query: 104 WRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           +R        H  EF M+E   A    +  M    + +R   +              + +
Sbjct: 252 FRAENSHTTRHLAEFWMIEPEIAFADLQDDMNCAEDYVRFMCQWLLDHCLEDMKFISSMY 311

Query: 163 SE-PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +         A   +  I     ++  ++       +  ++   +V      +    R 
Sbjct: 312 DKTAVDRLKLVASTPFVRITYTEAIEILEKARTSKCGVTEKKFENKVEWGIDLASEHERY 371

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLD 280
           L E+I     I     +  YP    A        +        L     EL         
Sbjct: 372 LTEEIYKKPVI-----VYNYPKDIKAFYMRLNDDEKTVAAMDVLVPKVGELVGGSQREER 426

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNI 339
                 R ++                E ++        + +G  +GF+R+++  TG  NI
Sbjct: 427 QDVLERRLKEMNL--------PMEPYEWYIDLRRHGTVKHAGFGLGFERMILFATGLENI 478

Query: 340 NEVIWTPF 347
            +VI  P 
Sbjct: 479 RDVIPFPR 486


>gi|126699862|ref|YP_001088759.1| asparaginyl-tRNA synthetase [Clostridium difficile 630]
 gi|254975837|ref|ZP_05272309.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255093224|ref|ZP_05322702.1| asparaginyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255101388|ref|ZP_05330365.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255307262|ref|ZP_05351433.1| asparaginyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|255314966|ref|ZP_05356549.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255517641|ref|ZP_05385317.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255650751|ref|ZP_05397653.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260683837|ref|YP_003215122.1| asparaginyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260687497|ref|YP_003218631.1| asparaginyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306520662|ref|ZP_07407009.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|115251299|emb|CAJ69130.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Clostridium difficile]
 gi|260210000|emb|CBA64029.1| asparaginyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260213514|emb|CBE05234.1| asparaginyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 465

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 109/359 (30%), Gaps = 47/359 (13%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+   S  +  S       +   +T  +
Sbjct: 124 AHLRPRSNTFSAVFRVRSIAAYAIHKFFQERNFVYAHSPIITGSDCEGAGEMFRITTMDL 183

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K   L  S +    +++A     ++ F   +R        H
Sbjct: 184 NDIPKTEDGKIDYTQDFFGKEANLTVSGQL-NAEIMALSFRNVYTFGPTFRAENSYTGRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E        E  M+   ++I+                    F+      + E 
Sbjct: 243 ASEFWMIEPEIVFADLEDNMELAEDMIKYVISYV----LENAPEEMEFFNSFIDKGLLER 298

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             +  N +                     ++G    +   W           I   +  N
Sbjct: 299 LNKIVNSEFIRITYT-------KAVELLIESGHEFEYPVEWGCDLQTEHERYITEQI-YN 350

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
           C   +  YP    A       D +  +  +L    +              QR   E  + 
Sbjct: 351 CPVFVTDYPKDIKAFYMRMNEDGKTVRAMDLLVPGVGEIVGGS-------QREEREDVLL 403

Query: 294 EKKKIYNETYPIDEDFLACLT----EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++    NE    +ED+   L          SG  +GF+R++M +TG +NI +VI  P +
Sbjct: 404 DRI---NEMGLREEDYWWYLELRKFGTATHSGFGLGFERIIMYMTGMSNIRDVIPFPRT 459


>gi|157951696|ref|NP_705819.3| probable asparaginyl-tRNA synthetase, mitochondrial precursor [Mus
           musculus]
 gi|81873734|sp|Q8BGV0|SYNM_MOUSE RecName: Full=Probable asparaginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS;
           Flags: Precursor
 gi|26338379|dbj|BAC32875.1| unnamed protein product [Mus musculus]
 gi|26338574|dbj|BAC32958.1| unnamed protein product [Mus musculus]
 gi|26341458|dbj|BAC34391.1| unnamed protein product [Mus musculus]
 gi|74209761|dbj|BAE23597.1| unnamed protein product [Mus musculus]
 gi|74211175|dbj|BAE37666.1| unnamed protein product [Mus musculus]
          Length = 477

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 102/360 (28%), Gaps = 37/360 (10%)

Query: 2   HQIPSQPWWN-RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE 56
           H +  +          R       L  R+   +++  YF +N F+ I +  L  +     
Sbjct: 134 HPL--EYLRQYPHLRCRTNALGSILRVRSEATAAIHSYFKDNGFVHIHTPVLTSNDCEGA 191

Query: 57  THIRAFSTELII------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
             +  F  E         +     P +L  S +    ++++    ++F F   +R     
Sbjct: 192 GEL--FQVEPSSKIKGPKESFFDVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQ 248

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   +     Q +   M  +  A               C+ F       
Sbjct: 249 SRRHLAEFYMVEAEISFVESLQDLMQVMEELFKATTEMVLSHCPEDVELCHQFIAAGQKG 308

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             E   +          +N             +QA    A    W         + +  +
Sbjct: 309 RLEHMLK----------NNFLIISYTEAIEILKQASQNFAFTPKWGVDLQTEHEKYLVRH 358

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
            G      +  YP+           D        +      L     EL     +  R+ 
Sbjct: 359 CGNIPV-FVINYPSELKPFYMRENEDGPQNTVAAV----DLLVPGVGELFGGSLREERYH 413

Query: 290 -KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             E +  +    + Y     +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 414 VLEQRLARSGLTKAYQ---WYLDLRKFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 470


>gi|291302345|ref|YP_003513623.1| Aspartate--tRNA ligase [Stackebrandtia nassauensis DSM 44728]
 gi|290571565|gb|ADD44530.1| Aspartate--tRNA ligase [Stackebrandtia nassauensis DSM 44728]
          Length = 447

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 61/338 (18%), Positives = 105/338 (31%), Gaps = 37/338 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H RR+      +      RE      F EI +  +  S   E+    F       D+  
Sbjct: 138 RHPRRKAAFELASAATMGFRETVAAMDFTEIFTPKIVASA-TESGANVF-----AIDYFG 191

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQL 132
           +P YL  SP+F  K+ +    E++F     +R        H  E+T L+         + 
Sbjct: 192 RPGYLAQSPQFY-KQTMVGVFERVFEVGPVFRAEPHDTVRHLAEYTSLDVEFGFIESYRD 250

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + + +  +      A  +  +       P                           P+  
Sbjct: 251 VAEVLREVVAGMVSAVAERAAAAVALLEPVVP------------------QVPSRFPELH 292

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-I 251
               L L +++ G  ++  +  S    R + E      G +   ++  YP  +       
Sbjct: 293 FAEALELISRETGEDLSGVNDLSPAHERWVGEWARREHGSD-FAVVVGYPMSKRPFYTAE 351

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P  P ++  F+L     E+      L    +       +         E Y     +L 
Sbjct: 352 DPGRPGYSDSFDLLFRGTEMVTGGRRLHRYADYLAAIAAQ-----GGSPEPY---AGYLE 403

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                MP   G A+G +R V  +TG  NI EV   P  
Sbjct: 404 AFKHGMPPHGGFAIGLERFVAQLTGVANIREVTLFPRD 441


>gi|228472298|ref|ZP_04057064.1| asparagine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276501|gb|EEK15225.1| asparagine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 474

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 123/376 (32%), Gaps = 42/376 (11%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R       +  R+ +  ++ +YF E  F  +++  +  S    
Sbjct: 103 PKKHSLEFLREQAHLRVRTNAFGAIMRVRSTLAYAIHKYFQEKGFFYVNTPIITGSDAEG 162

Query: 56  ETHI---------RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
              +             TE    D+      +   L  S +    +  A    KI+ F  
Sbjct: 163 AGEMFRVTTLDAKNPPLTETGEVDYKKDFFGRETNLTVSGQL-EGETFAMSLGKIYTFGP 221

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A       M    + I+   +   +            
Sbjct: 222 TFRAENSNTSRHLAEFWMIEPEMAFYDLIDNMNLAEDFIKNVLKYTLEVRREDIEFLNQR 281

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQP--------DRHLLYLQAQQAGIRVAHDDT 213
           F E E     +  +  + I+    + + D          +        ++   +   D+ 
Sbjct: 282 FLEEEKTKPQQERSEMSLIEKLEFVIHNDFKRVSYTEAVEILKNCNHNKKKKFQYLIDEW 341

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
             D+ S      +E + G  C  IL  YPA   A       D +  +  ++    I    
Sbjct: 342 GVDLQSEHERYLVEKHFG--CPVILYDYPAKIKAFYMRLNEDGKTVRAMDILFPGI---- 395

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              E++   ++  R+E   Q+   +  +   +   +L          SG  +GF+RLV+ 
Sbjct: 396 --GEIVGGSQREERYEVLKQKIADLGMDEQTL-WWYLELRKFGTAVHSGFGLGFERLVLF 452

Query: 333 VTGANNINEVIWTPFS 348
            TG  NI +VI  P +
Sbjct: 453 TTGMTNIRDVIPYPRT 468


>gi|218128465|ref|ZP_03457269.1| hypothetical protein BACEGG_00035 [Bacteroides eggerthii DSM 20697]
 gi|317475709|ref|ZP_07934969.1| asparaginyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|217989356|gb|EEC55669.1| hypothetical protein BACEGG_00035 [Bacteroides eggerthii DSM 20697]
 gi|316908165|gb|EFV29859.1| asparaginyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 467

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 109/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ E+F +  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHEFFHKKGFFYFHTPIITGSDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A            + F +         
Sbjct: 242 LAEFWMVEPEVAFNDITDNMDLAEEFIKFCVQWALDNCADDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +   + +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 VERLQGVLKESFVRLPYTEGIRIL-EEAVAKGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +  +R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYAKLMNRIEEL 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMTNIRDVIPFPRT 461


>gi|229017507|ref|ZP_04174408.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|228743831|gb|EEL93932.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 437

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 111/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 129 RHERIAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 182

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 183 KEAYLAQSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 242

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 243 VMQLETDVLRYMFQQVAKIC--------------------EKELQLLQIEVPVITEIPKI 282

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 283 TLLEAQAILKNKYRKESPIGDLDTEG-EKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 340

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 341 PNKENEAVTDSFDLLYKGLEITSGAQRIHNHEMLLASFKE-----KGLHPEKFQ---SYL 392

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 393 NTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 431


>gi|289550765|ref|YP_003471669.1| Asparaginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|315658261|ref|ZP_07911133.1| asparagine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|289180297|gb|ADC87542.1| Asparaginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|315496590|gb|EFU84913.1| asparagine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 430

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 112/350 (32%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F  + + +ID   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEIIRATYEFFDTHGYTKIDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A    +F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDQDAFLSQSGQLYLEAAAMAH-RNVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + ++     +    +   +       +     S+ E +  A  F R    D
Sbjct: 224 AEMAFTTHAESLEVQEQYVAHVVQSVLENCTLELKLLDRDTSKLEKV--ATPFPRITYDD 281

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               ++ G     D  W D F       I  +   +    +  Y
Sbjct: 282 ---------------AIDYLKEQGFD---DIEWGDDFGAPHETAIANHY--DLPVFIINY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK--I 298
           P           P +       +L A          E++   E+ +  E   +  K+  +
Sbjct: 322 PTSIKPFYMQPNPDNNNTVLCADLIAP-----EGYGEIIGGSERINNLELLEERIKQYHL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E+Y    D           SG  +G +R V  ++G  ++ E    P  
Sbjct: 377 DEESYSYYLDLRR--YGSVPHSGFGLGLERTVAWISGVEHVRETSPFPRL 424


>gi|226491502|ref|NP_078954.4| probable asparaginyl-tRNA synthetase, mitochondrial precursor [Homo
           sapiens]
 gi|296452944|sp|Q96I59|SYNM_HUMAN RecName: Full=Probable asparaginyl-tRNA synthetase, mitochondrial;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS;
           Flags: Precursor
          Length = 477

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 104/349 (29%), Gaps = 38/349 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H+R R       L  R+   +++  +F ++ F+ I +  +  +       +  F  E   
Sbjct: 144 HFRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGEL--FQLEPSG 201

Query: 69  ------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                 ++    P +L  S +    ++++    ++F F   +R        H  EF M+E
Sbjct: 202 KLKVPEENFFNVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIE 260

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +     Q +   +  +  A  +            C+ F  P      E   +     
Sbjct: 261 AEISFVDSLQDLMQVIEELFKATTMMVLSKCPEDVELCHKFIAPGQKDRLEHMLK----- 315

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                +N             +QA         W         + +  + G      +  Y
Sbjct: 316 -----NNFLIISYTEAVEILKQASQNFTFTPEWGADLRTEHEKYLVKHCGNIPV-FVINY 369

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR--FEKEMQEKKKIY 299
           P            D        +      L     EL     +  R  F +E   +  + 
Sbjct: 370 PLTLKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGGLREERYHFLEERLARSGLT 425

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                + + +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 426 E----VYQWYLDLRRFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 470


>gi|288924577|ref|ZP_06418514.1| asparagine--tRNA ligase [Prevotella buccae D17]
 gi|288338364|gb|EFC76713.1| asparagine--tRNA ligase [Prevotella buccae D17]
          Length = 466

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 111/356 (31%), Gaps = 38/356 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  YF E+ F    +  +  S       +   +T+ +
Sbjct: 122 AHLRLRTNTFGAVFRIRHHMAMAIHRYFHEHGFFYFHTPIITASDCEGAGEMFQVTTKNL 181

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 182 YNLEKDEEGRIKYDDDFFGKTTSLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + LM    + I+   + A          +    ++    ++   
Sbjct: 241 LAEFWMIEPEVAFLEQQGLMDLEEDFIKYCVKWA----LDNCKDDLEFLNKMIDKSLIAR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                  D               +  +A +AG +  +  +W    +      +  +    
Sbjct: 297 LEGVLKEDFVRLTYTEGI----RILEEAVKAGQKFENPVSWGVDLASEHERYLVEHHFRK 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP    A       D R  +  ++    I       E++    +   ++K M 
Sbjct: 353 PV-IMTDYPKDIKAFYMKINEDGRTVQGTDVLFPQI------GEIIGGSVREENYDKLMG 405

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E +        +   +L          +G  +GF+RL++ VTG  NI +VI  P +
Sbjct: 406 EVEHRNVPMKDM-WWYLDTRKYGTCPHAGFGLGFERLILFVTGMQNIRDVIPFPRT 460


>gi|283780925|ref|YP_003371680.1| asparaginyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283439378|gb|ADB17820.1| asparaginyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 462

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 107/356 (30%), Gaps = 42/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL-- 66
            H R R          RN I  S+  +F E+ F+ +++  +  S           T L  
Sbjct: 122 AHLRPRTNTFGAVARLRNCISRSIHNFFQEDGFLYVNTPIITASDCEGAGAMFRVTTLDL 181

Query: 67  -----------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
                        QD  +KP YL  S +   +    A   KI+ F   +R        H 
Sbjct: 182 EKLPKVDGKVDNSQDFFQKPAYLTVSGQLEGEIFACA-LGKIYTFGPTFRAENSNTSRHL 240

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    +  M      ++           S    +   F+E    T     
Sbjct: 241 AEFWMVEPEVAFNDLDDNMTLAERFLKRMF----SDALSQCGEDLKFFNEHVDTTTIATL 296

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            + A  +                    +  G +  +  +W           +      + 
Sbjct: 297 EKLATSEFRRISYTE-------AISILETCGEKFDYPVSWGCDLQSEHERYLTEK-KFDG 348

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEMQ 293
             IL  YP            D +  +  ++    +       E++   ++  R E  E +
Sbjct: 349 PVILYDYPRSLKPFYMRVNDDGKTVRAMDVLVPKV------GEIIGGSQREERLEVIEGR 402

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ++  N        +L          +G  +G +R V  ++G  NI +VI  P +
Sbjct: 403 MAEQHLNPADY--WWYLDLRRFGTVPHAGFGLGLERAVQFISGMANIRDVIPFPRT 456


>gi|281425342|ref|ZP_06256255.1| asparagine--tRNA ligase [Prevotella oris F0302]
 gi|281400505|gb|EFB31336.1| asparagine--tRNA ligase [Prevotella oris F0302]
          Length = 463

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 105/353 (29%), Gaps = 33/353 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE------THIRA 61
            H R R          R+ +  ++ +YF ++ F    +  +  S           T +  
Sbjct: 120 AHLRLRTNTFGAVFRIRHNMAIAVHKYFHDHGFYYFHTPLITASDAEGAGEMFQVTTLDL 179

Query: 62  FSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
             T    +    +  +     L  S +   +    A    I+ F   +R        H  
Sbjct: 180 ARTGKDGEVPYERDFFGKKTSLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPRHLA 238

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A    ++LM    + I+   + A                +    T+     
Sbjct: 239 EFWMIEPEVAFLDKDELMDLEEDFIKYCVQWALDNCKDDLEFLNKMIDKTLLQTLESVVK 298

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
                   + +        H+L    +Q          W    S      +         
Sbjct: 299 E-------SFVRLTYTEGIHILEEAVKQGHKFEFPITGWGMDLSSEHERFLVEEY-FKRP 350

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            I+  YP+   A       D +  +  ++    I       E++    +   ++K + E 
Sbjct: 351 VIMTDYPSEIKAFYMKKNPDGKTMQGTDVLFPRI------GEIIGGSVREESYDKLVNEI 404

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           K    E                  +G  +GF+RL++ VTG  NI +VI  P +
Sbjct: 405 KARGMEKDCYSWYLDTRKYGSCPHAGFGLGFERLILFVTGMQNIRDVIPFPRT 457


>gi|145502188|ref|XP_001437073.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404220|emb|CAK69676.1| unnamed protein product [Paramecium tetraurelia]
          Length = 579

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 109/334 (32%), Gaps = 33/334 (9%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           ++     ++ I    RE+ VEN FIEI +  L    G         T +    +  +   
Sbjct: 270 KQAIFRVQSGIGLLFREFLVENGFIEIHTPKL--IGGTSEGG----TNVFKLKYFNQDAC 323

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  L A  +++F  A  +R        HQ EF  ++     + +   + D 
Sbjct: 324 LAQSPQLYKQMCLMADYDRVFEVAPVFRAENSNTHRHQCEFISMDIEMVIKEHFTELLDL 383

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           M  +        +K +  +    +     E   + E   +                    
Sbjct: 384 MGDLCIYMFKGIEKRYQKEIEIISQQFPFEPFKIPEPVLKLT---------------FEE 428

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                 +AG+     D    +  +IL + +    G +   IL RYP             D
Sbjct: 429 GVKMLHEAGVNQDPHDDLDTVNEKILGKLVREKYGTD-FYILHRYPKKARPFYTMPCHDD 487

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P +T  ++ +    E+ +    + DP        K+++EK           +D++     
Sbjct: 488 PNYTLSYDFFMRGEEIVSGAQRVHDP----ELLVKQIKEK----GIAVEPLKDYIDSFRY 539

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 G A G +R+  L     NI+     P  
Sbjct: 540 GAYPHGGCAFGLERVAFLYFNLKNISNACMFPRD 573


>gi|39644781|gb|AAH07800.2| Asparaginyl-tRNA synthetase 2, mitochondrial (putative) [Homo
           sapiens]
 gi|119595469|gb|EAW75063.1| asparaginyl-tRNA synthetase 2 (mitochondrial)(putative), isoform
           CRA_c [Homo sapiens]
          Length = 477

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 104/349 (29%), Gaps = 38/349 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H+R R       L  R+   +++  +F ++ F+ I +  +  +       +  F  E   
Sbjct: 144 HFRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGEL--FQLEPSG 201

Query: 69  ------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                 ++    P +L  S +    ++++    ++F F   +R        H  EF M+E
Sbjct: 202 KLKVPEENFFNVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIE 260

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +     Q +   +  +  A  +            C+ F  P      E   +     
Sbjct: 261 AEISFVDSLQDLMQVIEELFKATTMMVLSKCPEDVELCHKFIAPGQKDRLEHMLK----- 315

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                +N             +QA         W         + +  + G      +  Y
Sbjct: 316 -----NNFLIISYTEAVEILKQASQNFTFTPEWGADLRTEHEKYLVKHCGNIPV-FVINY 369

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR--FEKEMQEKKKIY 299
           P            D        +      L     EL     +  R  F +E   +  + 
Sbjct: 370 PLTLKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGGLREERYHFLEERLARSGLT 425

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                + + +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 426 E----VYQWYLDLRRFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 470


>gi|301114479|ref|XP_002999009.1| asparaginyl-tRNA synthetase [Phytophthora infestans T30-4]
 gi|262111103|gb|EEY69155.1| asparaginyl-tRNA synthetase [Phytophthora infestans T30-4]
          Length = 513

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 113/354 (31%), Gaps = 30/354 (8%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETH-IRAFSTELI 67
           H R R          RN +   L  YF EN F+ + S  L  +         R    +  
Sbjct: 162 HLRARTNTFGAVTRVRNALGQGLHSYFQENDFLHLHSPILTSNDCEGAGEMFRIAKIDGK 221

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH 126
            ++    P YL  S +   +   +A   K++ F   +R        H  EF M+E   A 
Sbjct: 222 DEEFFGTPTYLTVSGQLHAEMYASA-LSKVYTFGPTFRAENSNTTRHLAEFWMVEPEMAF 280

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              E+ +      ++ +   A          +   F++     +AE   R    +     
Sbjct: 281 AGLEECVASAQGAVQRSVSHALNTCAE----DIAFFNKNYDKKIAERLQRVVEKEFARLT 336

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
                        + +   I     +   D+ +       E  +G      +  YPA   
Sbjct: 337 YTEAIAVLQKAVAEGKGKVIFEKKPEWGMDLQTEHERFLAEKYVG--GPVFVTDYPADIK 394

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEMQEKKKIYNETYPI 305
           A      A     +  E  A    L     EL+    +  RFE  E + +         +
Sbjct: 395 AFYMRKNAPDEQNR--ETVAGMDLLVPKIGELVGGSVREERFEVLEKKMRHLGLLPEEDL 452

Query: 306 DED-----------FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           DED           +L          +G  +GF+RLV+  TG +NI +VI  P 
Sbjct: 453 DEDAIASAGGDLDWYLDLRRFGSVPHAGWGLGFERLVLFATGMDNIRDVIPLPR 506


>gi|218230781|ref|YP_002366908.1| aspartyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218158738|gb|ACK58730.1| aspartate--tRNA ligase [Bacillus cereus B4264]
          Length = 432

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDLELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQKVAKKC--------------------EIELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKEIYNSE-FVFITHYPKKARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 426


>gi|153952771|ref|YP_001393536.1| asparaginyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219853437|ref|YP_002470559.1| hypothetical protein CKR_0094 [Clostridium kluyveri NBRC 12016]
 gi|189083270|sp|A5N4F7|SYN_CLOK5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|146345652|gb|EDK32188.1| AsnS [Clostridium kluyveri DSM 555]
 gi|219567161|dbj|BAH05145.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 463

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 109/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
            H R R          R++   ++ ++F E  F+ +++  +  S       +   +T   
Sbjct: 122 AHLRPRSNTFSAVFRVRSIAAYAVHKFFQEKDFVYVNTPIITGSDCEGAGEMFRITTMDL 181

Query: 65  -----ELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                E        K  +     L  S + S  + +A     ++ F   +R  +     H
Sbjct: 182 NNVPKEEDNSVDFSKDFFGKETNLTVSGQLSA-ETMALAFRNVYTFGPTFRAEDSNTSRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +  M     +++       +K           F+     ++ + 
Sbjct: 241 AAEFWMIEPEMAFAELKDYMDTAEELVKYIINYVLEKAPE----EMAFFNSFIDKSLFDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N + G                  Q++G    +   W           +   +   
Sbjct: 297 LNNVVNSEFGRITYTE-------AVDILQKSGASFQYPVEWGIDLQTEHERYLTEKVFEK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    +       E++   ++  R     +
Sbjct: 350 P-IFVTDYPKAIKAFYMRENEDGKTVAAADLLVPGV------GEIVGGSQREERLSVLEK 402

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +           +L        + SG  +GF+R++M +TG +NI +VI  P +
Sbjct: 403 RISEFGLNKEDY-WWYLELRKYGETKHSGFGLGFERILMYITGMSNIRDVIPFPRT 457


>gi|168183293|ref|ZP_02617957.1| asparagine--tRNA ligase [Clostridium botulinum Bf]
 gi|237793933|ref|YP_002861485.1| asparaginyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673549|gb|EDT85510.1| asparagine--tRNA ligase [Clostridium botulinum Bf]
 gi|229263698|gb|ACQ54731.1| asparagine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 463

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 103/357 (28%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+  ++  +  S       +   +T   
Sbjct: 122 AHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDL 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D    P  L  S + S +    A    ++ F   +R        H
Sbjct: 182 NNIPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALA-FRNVYTFGPTFRAENSNTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       + +  ++++                    F+      + + 
Sbjct: 241 ASEFWMIEPEMAFAELTDYLDNAEDMVKFVINYV----MENAPEEMAFFNSFVDKGLFDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D                    Q++G +  ++  W           +   +   
Sbjct: 297 LDNVVNSDFKRITYTE-------AVELLQKSGAKFDYEVEWGIDLQTEHERYLTEQIFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +     +L    + E+               R E+  
Sbjct: 350 PV-FVTDYPKDIKAFYMRLNDDGKTVAAADLLVPGVGEIIGGSQREERLDVLEKRMEELN 408

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+            +L        + SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 409 LNKEDY--------WWYLELRKYGETKHSGYGLGFERILMYITGMTNIRDVIPFPRT 457


>gi|168334959|ref|ZP_02693077.1| asparaginyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 461

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 111/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            + R R          R+++  ++ ++F +  F+ + +  +  +       +   +T   
Sbjct: 120 AYLRPRTNTFAAVFRVRSLVAYAIHKFFQDRHFVYVHTPIITANDCEGAGEMFRVTTLSA 179

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + S +    A    ++ F   +R        H
Sbjct: 180 TEPKLLKNGEVDFSEDFFGKMASLTVSGQLSAETFALA-FRDVYTFGPTFRAENSNTPRH 238

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M    ++++   +                F+      + + 
Sbjct: 239 AAEFWMIEPEIAFADLEDNMHLAEDMLKFVIQYV----LDNAPEEMAFFNSFVDKGIKDR 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                  + G                  Q++G +  +   W           +       
Sbjct: 295 LISILKSNFGQVTYTD-------AIDILQKSGQKFEYKVEWGVDLQTEHERYLTEKHFKK 347

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A      AD +     +L    +       EL+   ++  R    ++
Sbjct: 348 PV-FVIDYPKDIKAFYMRLNADNKTVAAMDLLVPGV------GELIGGSQREERL-DVLK 399

Query: 294 EKKKIYNETYPIDEDF-----LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + K   E +  +ED+     L         SG  +GF+RLVM +TG  NI +VI  P +
Sbjct: 400 LRMK---ECHLNEEDYFWYLNLRKFGGTR-HSGFGLGFERLVMYLTGMTNIRDVIPYPRT 455


>gi|28199814|ref|NP_780128.1| asparaginyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182682566|ref|YP_001830726.1| asparaginyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130160|sp|Q87A82|SYN_XYLFT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|28057935|gb|AAO29777.1| asparaginyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632676|gb|ACB93452.1| asparaginyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307578846|gb|ADN62815.1| asparaginyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 466

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 107/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F EN +  I +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLH 113
                          D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 VNLPRTETGGIDFSHDFFGKETFLTVSGQLNVEAYALA-LSKVYTFGPTFRAENSHTPRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A     +  +     ++   +   ++             E   I+  E 
Sbjct: 244 LAEFWMIEPEIAFADLAEDARVAEQFLKFLFKTVLEER-DDDLAFITERVEKTTISKLE- 301

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                    G      ++ +        +++G +      W           +     I 
Sbjct: 302 ---------GFINSPFERIEYTDAIKLLERSGKKFDFPVEWGLDLQTEHERWLTEKH-IG 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              ++  YP    A       D +             L     E++   ++  R E  ++
Sbjct: 352 RPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEMLDI 405

Query: 293 QEKKKIYNETYP-IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  +   +  +     DF          +G  +GF+RLV+ V G +NI + I  P 
Sbjct: 406 RMAQFGLDPAHYQWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLSNIRDAIPYPR 459


>gi|170755098|ref|YP_001780236.1| asparaginyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169120310|gb|ACA44146.1| asparaginyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 463

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 103/357 (28%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+  ++  +  S       +   +T   
Sbjct: 122 AHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDL 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D    P  L  S + S +    A    ++ F   +R        H
Sbjct: 182 KNIPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALA-FRNVYTFGPTFRAENSNTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       + +  ++++                    F+      + + 
Sbjct: 241 ASEFWMIEPEMAFAELTDYLDNAEDMVKFVINYV----MENAPEEMAFFNSFVDKGLFDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D                    Q++G +  ++  W           +   +   
Sbjct: 297 LDNVVNSDFKRITYTE-------AVELLQKSGAKFDYEVEWGIDLQTEHERYLTEQIFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +     +L    + E+               R E+  
Sbjct: 350 PV-FVTDYPKDIKAFYMRLNDDRKTVAAADLLVPGVGEIIGGSQREERLDVLEKRMEELN 408

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+            +L        + SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 409 LNKEDY--------WWYLELRKYGETKHSGYGLGFERILMYITGMTNIRDVIPFPRT 457


>gi|255011768|ref|ZP_05283894.1| asparaginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313149606|ref|ZP_07811799.1| asparaginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313138373|gb|EFR55733.1| asparaginyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 467

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 110/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITGSDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIIYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    ++ M      I+   + A            + F +         
Sbjct: 242 LAEFWMIEPEVAFNEIQENMDLAEEFIKYCVKWALDNCADDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +     +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLEGVLKEDFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERYLVEDH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSERESDYNKLMTRIEEM 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG +NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRT 461


>gi|253567191|ref|ZP_04844641.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251944022|gb|EES84541.1| asparaginyl-tRNA synthetase [Bacteroides sp. 3_2_5]
          Length = 467

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 109/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIVYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    ++ M      I+     A            + F +         
Sbjct: 242 LAEFWMIEPEVAFNEIQENMDLAEEFIKYCVRWALDNCADDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +     +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLEGVLKEDFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERYLVEDH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSERESDYNKLMTRIEEM 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG +NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRT 461


>gi|255086471|ref|XP_002509202.1| predicted protein [Micromonas sp. RCC299]
 gi|226524480|gb|ACO70460.1| predicted protein [Micromonas sp. RCC299]
          Length = 405

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 111/334 (33%), Gaps = 34/334 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ +    R+      F+EI +  L    G  +   A        D++ +P  L
Sbjct: 96  QAIFRIQSAVCELFRDALRAQDFVEIHTPKLI---GGASEGGASV---FKLDYMGQPACL 149

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   +  + +  E++F     +R        H  EFT L+   A + +   + D +
Sbjct: 150 AQSPQLYKQMAVESDLERVFEIGPVFRAENSNTHRHLCEFTGLDMEMAIKEHYFEVLDVL 209

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +         + F  +    +     E +       R                +    
Sbjct: 210 DNLFLHMFDGLNERFKHELQVVSQQFPYEPLKYLRPTLR---------------LEFPQG 254

Query: 198 YLQAQQAGIR-VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
               ++AG+  V      S    RIL + ++     +   +L +YPA          PAD
Sbjct: 255 IAMLKEAGVEGVDPLGDLSTEHERILGQLVKEKYDTD-FYMLTKYPAAARPFYTMPDPAD 313

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P ++  ++++    E+ +    + DP     R  +   E   I        + ++     
Sbjct: 314 PDYSNSYDIFIRGEEIISGAQRIHDPALLTKRAVECGIEVDTI--------QAYIDAFKY 365

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 G  +G +R+VML     NI +    P  
Sbjct: 366 GALPHGGCGVGLERVVMLFLNLGNIRKTSMFPRD 399


>gi|265767787|ref|ZP_06095319.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263252459|gb|EEZ23987.1| asparaginyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|301164754|emb|CBW24313.1| asparaginyl-trna synthetase [Bacteroides fragilis 638R]
          Length = 467

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 109/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIVYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    ++ M      I+     A            + F +         
Sbjct: 242 LAEFWMIEPEVAFNEIQENMDLAEEFIKYCVRWALDNCADDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +     +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLEGVLKEDFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERYLVEDH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSERESDYNKLMTRIEEM 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG +NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRT 461


>gi|183598382|ref|ZP_02959875.1| hypothetical protein PROSTU_01775 [Providencia stuartii ATCC 25827]
 gi|188020559|gb|EDU58599.1| hypothetical protein PROSTU_01775 [Providencia stuartii ATCC 25827]
          Length = 466

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 108/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGYFWVSTPIITASDTEGAGEMFRVSTLDY 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   +  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 NNLPRNDKGEVDFSEDFFGRESFLTVSGQLNGEAYATA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  S + +      +++   + A  +    +  +   F++     V   
Sbjct: 244 LAEFWMVEPEVAFASLDDVAGLAEQMLKFVFKAALDE----RRDDLEFFAQRVDKEVINR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D           D        +  G +  +   W    S      +       
Sbjct: 300 LESFVNSDFAQV-------DYTDAIKILETCGKKFENPVYWGVDMSSEHERYLAEQHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R E+  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDMLDARLEELG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RLV  VTG  N+ EVI  P +
Sbjct: 412 MNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLVAYVTGVGNVREVIPFPRT 460


>gi|301761808|ref|XP_002916322.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281341070|gb|EFB16654.1| hypothetical protein PANDA_004385 [Ailuropoda melanoleuca]
          Length = 477

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/361 (14%), Positives = 101/361 (27%), Gaps = 39/361 (10%)

Query: 2   HQIPSQPWWN-RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE 56
           H +  +          R       L  R+   +++  +F ++ F+ I +  +  +     
Sbjct: 134 HPL--EYLRQYPHLRCRTNTLGSILRVRSEATAAIHSFFKDSGFVHIHTPIITSNDCEGA 191

Query: 57  THIRAFSTELII------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
             +  F  E         ++    P +L  S +    ++++    ++F F   +R     
Sbjct: 192 GEL--FQVEPSSKIKVPEENFFNVPAFLTVSGQLHL-EVMSGAFTRVFTFGPTFRAENSQ 248

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   +     Q +   M  +   A              C+ F  P    
Sbjct: 249 SRRHLAEFYMVEAEISFVESLQDLMQVMEGLFKTATTIVLSNCPEDVELCHKFIAPGQKD 308

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
                 +          +N             +Q+         W         + +  +
Sbjct: 309 RLGHMLK----------NNFVIISYTEAIEILKQSSENFVFTPEWGVDLHTEHEKYLVKH 358

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR-- 287
            G      +  YP            D        +      L     EL     +  R  
Sbjct: 359 CGNIPV-FVINYPLALKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGSLREERYH 413

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F ++   +     E Y     +L           G  MGF+R +  + G +NI +VI  P
Sbjct: 414 FLEQRLAR-LGLTEAYQ---WYLDLRRFGSVPHGGFGMGFERYLQCILGIDNIKDVIPFP 469

Query: 347 F 347
            
Sbjct: 470 R 470


>gi|238898063|ref|YP_002923744.1| asparagine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465822|gb|ACQ67596.1| asparagine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 466

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/370 (15%), Positives = 111/370 (30%), Gaps = 44/370 (11%)

Query: 3   QIPSQPW--WNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
             P +    + R+  H R R  L       R+ +  ++  +F E  +  I +  +  S  
Sbjct: 111 MSPKRHSVEYLREVAHLRPRTNLIGAVTRIRHHLAQAIHRFFHEKGYFWIATPIITTSDT 170

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 171 EGAGEMFRVSTLDLANISKTADQKIDFSEDFFGKEAFLTVSGQLNAETYACA-LSKVYTF 229

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A  + E +      +++       ++    +  + 
Sbjct: 230 GPTFRAENSHTSRHLAEFWMVEPEVAFATLEDVALLAEEMLKYVFSAILKE----REDDL 285

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           + F+E       +    + + D         + D        +       H  +W    S
Sbjct: 286 DFFTERVDKKAKKRLEEFISSDFA-------RIDYTEAIEILRHCNHSFVHPVSWGIDLS 338

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDEL 278
                 +          +   YP    A       D +     ++ A  I E+       
Sbjct: 339 SEHERYLAETHFKAPVIVK-NYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQRE 397

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANN 338
                   R  +    ++   +  +  D             +G  +GF+RLV  VTG  N
Sbjct: 398 ERLDNLDQRLTEMGLNRE---DYAWYRDLR----RYGSVPHAGFGLGFERLVAYVTGVEN 450

Query: 339 INEVIWTPFS 348
           + E I  P +
Sbjct: 451 VREAIAFPRT 460


>gi|325286737|ref|YP_004262527.1| Asparaginyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322191|gb|ADY29656.1| Asparaginyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 477

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 67/382 (17%), Positives = 123/382 (32%), Gaps = 54/382 (14%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R       +  R+ +  ++ +YF +N F  + +  +  S    
Sbjct: 106 PKKHTLEFLREKAHLRVRTNTFSAVMRMRSALSFAVHQYFQQNGFYHVHTPIITGSDAEG 165

Query: 56  ETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
              I   ST                 +D   K   L  S +   +        K++ F  
Sbjct: 166 AGEIFKVSTLDSKKPPLKEDGSVDYSEDFFGKETNLTVSGQLEAETYAMG-LGKVYTFGP 224

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A    +  M    + I+       +            
Sbjct: 225 TFRAENSNTSRHLAEFWMIEPEMAFYDLDANMDLAEDFIKSVLSYVLENCKDDLEFLEKR 284

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH----------D 211
             + E    A   +    I+    +   D   + + Y +A +                 +
Sbjct: 285 LLDEEKTKPAAERSEMPLIEKLKFIT--DNNFKRVSYTEAIEILRNCKPNKKKKFKYIIN 342

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
           +  +D+ S      +E +    C  IL  YPA   A       D +  +  ++    I  
Sbjct: 343 EWGADLQSEHERFLVEKH--FKCPVILFDYPAKIKAFYMRLNEDGKTVRAMDILFPGI-- 398

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE---DFLACL--TEMPQSSGIAMGF 326
                E++   ++  R +  +++ K +      IDE    +   L        SG  +GF
Sbjct: 399 ----GEIVGGSQREERLDVLLEKMKALD-----IDEKELWWYTDLRKYGSAVHSGFGLGF 449

Query: 327 DRLVMLVTGANNINEVIWTPFS 348
           +RLV+  TG  NI +VI  P +
Sbjct: 450 ERLVLFATGMGNIRDVIPFPRT 471


>gi|259046851|ref|ZP_05737252.1| asparagine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036474|gb|EEW37729.1| asparagine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 433

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/352 (17%), Positives = 122/352 (34%), Gaps = 41/352 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   +  RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 110 MDHRHLWLRST--KQHAIMEIRNAIIYASYEFFDKNGFIKFDSPILSGNAAEDS------ 161

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  +P +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 162 TELFETDYFGEPAFLTQSGQLYLEAGAMA-FGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 220

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
              + ++++ +      ++   +                 +E     ++EAF R      
Sbjct: 221 EYLYLTHDESLDLQEAYVKALIQGVLD-RAPHALETLERDTELLKKYISEAFKRITY--- 276

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILDRY 241
                     D  +  LQA +      ++     D F       I  + G+   T +  Y
Sbjct: 277 ----------DEAIDLLQAHENDEDTDYEHLEHGDDFGSPHETWISNHFGV--PTFVINY 324

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKKI- 298
           P    +      P +       +L            E++   E+   ++K + + K    
Sbjct: 325 PTEIKAFYMKPVPGNESRVLCADL-----LAPEGYGEVIGGSERETDYDKLLDRIKSNGL 379

Query: 299 --YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +  + +D   L         SG  +G +R+V  V G  +I E I  P  
Sbjct: 380 NPDDYAFYLD---LRKF-GSVPHSGFGLGLERMVTFVAGTKHIREAIPFPRL 427


>gi|301062195|ref|ZP_07202877.1| asparagine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300443707|gb|EFK07790.1| asparagine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 463

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 98/333 (29%), Gaps = 35/333 (10%)

Query: 31  SLREYFVENQFIEIDSMSLQYS---PGNE----THIRAFSTELIIQDH-IRKPLY----- 77
           ++  +F E  F+ I +  L  S      E    T +   S  L        +  +     
Sbjct: 145 AIHRFFQEKGFLYIHTPILTGSDCEGAGEMFRVTTLDPASVPLKNGGADYSQDFFCGPSH 204

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDC 136
           L  S +   +    A    ++ F   +R        H  EF M+E   A    +  +   
Sbjct: 205 LTVSGQLEAEIYALAV-GDVYTFGPTFRAENSNTSRHLAEFWMVEPEMAFCDLKGNVTLA 263

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           +  ++       +        +   F+     +V     R  N +  T            
Sbjct: 264 VEFLKYVFAHVLEHCVE----DMAFFNRFIDKSVIRTLERLVNQEFKTLTYTE------- 312

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                ++AG        W           +   +      +L  YP    A       D 
Sbjct: 313 AIKLLEKAGTHFEFPVAWGGDIQAEHERYLCEKVFEGPV-VLIDYPKDIKAFYMKMNDDG 371

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
           +  +  ++    I       +  D  E  H    +M        + Y     +L      
Sbjct: 372 KTVRAMDVLVPRIGEIIGGSQREDDYELLHSRITQM----GFDPKDY---WWYLDLRKFG 424

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               SG  +GF+RL+  VTG +NI +VI  P +
Sbjct: 425 SVPHSGFGLGFERLIQFVTGLSNIRDVIPFPRT 457


>gi|53715300|ref|YP_101292.1| asparaginyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|59798505|sp|Q64P24|SYN_BACFR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|52218165|dbj|BAD50758.1| asparaginyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 467

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 109/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F E  F    +  +  S       +   +T   
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHKFFHEKGFFYFHTPIITASDCEGAGQMFQVTTMNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDENGSIVYDDDFFGKQASLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    ++ M      I+     A            + F +         
Sbjct: 242 LAEFWMIEPEVAFNEIQENMDLAEEFIKYCVRWALDNCADDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +     +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLEGVLKEDFVRLPYTEGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERYLVEDH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R E+ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSERESDYNKLMMRIEEM 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG +NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRKFGTCPHSGFGLGFERLLLFVTGMSNIRDVIPFPRT 461


>gi|256851160|ref|ZP_05556549.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260660584|ref|ZP_05861499.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934626|ref|ZP_06339869.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297206025|ref|ZP_06923420.1| asparagine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256616222|gb|EEU21410.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548306|gb|EEX24281.1| asparaginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301201|gb|EFA93502.1| asparagine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149151|gb|EFH29449.1| asparagine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 432

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 106/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN + ++  ++F +  FI+ D+  L   +P         
Sbjct: 116 LDHRHLWLRSR--RPFAIMQIRNEMINATYDFFKKEGFIKFDAPILMNSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++     YL  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 167 TTELFHIEYFDNDAYLSQSGQLYAEVGAEA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      I    +                      I   E        D
Sbjct: 226 PEMAWTHQDESLDVQERYISYLVKRV--------------------IENCEYELNILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +       +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 VEKLRPAAEGNYTRLKYDDAVKMLQDAGRDFKWGDDFGAPDEAYISEQ--FDRPVFIMNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            +       E    ++       E++   E+   F+     K +I   
Sbjct: 324 PTSIKPFYMKKDPENPK----EYLCADMLAPEGYGEIVGGSEREENFD---VLKAQIEEA 376

Query: 302 TYPID--EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +D  E +L          SG  +GF+R +  +   +++ E I  P  
Sbjct: 377 GLNLDNYEWYLDLRRYGSVPHSGFGLGFERAITWICHLDHLREAIPFPRM 426


>gi|114639524|ref|XP_522122.2| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           isoform 2 [Pan troglodytes]
          Length = 477

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/362 (15%), Positives = 108/362 (29%), Gaps = 41/362 (11%)

Query: 2   HQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           H +    +  +  H+R R       L  R+   +++  +F ++ F+ I +  +  +    
Sbjct: 134 HPL---EYLRQHPHFRCRTNVLSSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEG 190

Query: 56  ETHIRAFSTELII------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
              +  F  E         ++    P +L  S +    ++++    ++F F   +R    
Sbjct: 191 AGEL--FQLEPSGKLKVPEENFFNVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENS 247

Query: 110 -GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   +     Q +   +  +  A  +            C+ F  P   
Sbjct: 248 QSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFKATTMMVLSKCPEDVELCHKFIAPGQK 307

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              E   +          +N             +QA         W         + +  
Sbjct: 308 DRLEHMLK----------NNFLIISYTEAVEILKQASQNFTFTPEWGADLRTEHEKYLVK 357

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR- 287
           + G      +  YP            D        +      L     EL     +  R 
Sbjct: 358 HCGNIPV-FVINYPLTLKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGGLREERY 412

Query: 288 -FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            F +E   +  +      + + +L           G  MGF+R +  V G +NI +VI  
Sbjct: 413 HFLEERLARSGLTE----VYQWYLDLRRFGSVPHGGFGMGFERYLQCVLGVDNIKDVIPF 468

Query: 346 PF 347
           P 
Sbjct: 469 PR 470


>gi|299141528|ref|ZP_07034664.1| asparagine--tRNA ligase [Prevotella oris C735]
 gi|298576864|gb|EFI48734.1| asparagine--tRNA ligase [Prevotella oris C735]
          Length = 465

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 105/353 (29%), Gaps = 33/353 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE------THIRA 61
            H R R          R+ +  ++ +YF ++ F    +  +  S           T +  
Sbjct: 122 AHLRLRTNTFGAVFRIRHNMAIAVHKYFHDHGFYYFHTPLITASDAEGAGEMFQVTTLDL 181

Query: 62  FSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
             T    +    +  +     L  S +   +    A    I+ F   +R        H  
Sbjct: 182 ARTGKDGEVPYERDFFGKKTSLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPRHLA 240

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A    ++LM    + I+   + A                +    T+     
Sbjct: 241 EFWMIEPEVAFLDKDELMDLEEDFIKYCVQWALDNCKDDLEFLNKMIDKTLLQTLESVVK 300

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
                   + +        H+L    +Q          W    S      +         
Sbjct: 301 E-------SFVRLTYTEGIHILEEAVKQGHKFEFPITGWGMDLSSEHERFLVEEY-FKRP 352

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            I+  YP+   A       D +  +  ++    I       E++    +   ++K + E 
Sbjct: 353 VIMTDYPSEIKAFYMKKNPDGKTMQGTDVLFPRI------GEIIGGSVREESYDKLVNEI 406

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           K    E                  +G  +GF+RL++ VTG  NI +VI  P +
Sbjct: 407 KARGMEKDCYSWYLDTRKYGSCPHAGFGLGFERLILFVTGMQNIRDVIPFPRT 459


>gi|224536212|ref|ZP_03676751.1| hypothetical protein BACCELL_01079 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522155|gb|EEF91260.1| hypothetical protein BACCELL_01079 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 467

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 109/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++  +F +  F+   +  +  S       +   +T+  
Sbjct: 123 AHLRPRTNTFGAVFRIRHNMAIAIHTFFHQKGFVYFHTPIITASDCEGAGQMFQVTTKNL 182

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YDLKKDEAGSIIYDDDFFGKQTSLTVSGQLEGELAATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M      I+   + A            + F +         
Sbjct: 242 LAEFWMVEPEVAFNDITDNMDLAEEFIKFCVKWALDNCADDVKFLNDMFDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
             R   +   + +  P      +L  +A   G +      W  D+ S      +E +   
Sbjct: 295 IERLQGVLKESFVRLPYTDGIKIL-EEAVAKGHKFEFPVYWGVDLASEHERYLVEEH--F 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R ++ 
Sbjct: 352 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSERESDYDKLMTRIDEM 411

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K +          +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 412 HIPMKDM--------WWYLDTRRFGTCPHSGFGLGFERLLLFVTGMANIRDVIPFPRT 461


>gi|295104508|emb|CBL02052.1| asparaginyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 462

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 113/370 (30%), Gaps = 52/370 (14%)

Query: 1   MHQIPSQPWWNRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE 56
           +  +P+          R   F      R++   ++ ++F EN F+   S  +  S     
Sbjct: 119 LRTMPT-------LRPRTNTFNAAFRVRSVAAYAIHKFFQENGFVYAHSPLITASDCEGA 171

Query: 57  THIRAFSTELIIQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFA 101
             +  F    +  D++ K            +     L  S +    + +A    K++ F 
Sbjct: 172 GEM--FRVTTLDLDNLPKTEDGAVDYSKDFFEKPVNLTVSGQLEA-EAMAMAFGKVYTFG 228

Query: 102 HAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
             +R  +     H  EF M+E   A       M +   +I+                   
Sbjct: 229 PTFRAEKSFTTRHAAEFWMIEPEMAFCDLNGYMDNAEAMIKYVIRYV----LDNCPDEMA 284

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
            F++     + E     AN +                    ++   +  +   W      
Sbjct: 285 FFNQFIDKGLVERLELVANSEFARISYTE-------AIEILKKNNKKFQYPVEWGVDIQT 337

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELL 279
                +   +       +  YP    +      AD +     ++    I EL        
Sbjct: 338 EHERYLTEVVYKKPV-FVTDYPKEIKSFYMKQNADGKTVAAADMLVPGIGELIGGSQREE 396

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           D  +   R ++         ++T    E +L        + +G  +GF+R++M +TG  N
Sbjct: 397 DYGKLVARMDE------LGMDKTNY--EWYLNLRKFGGVEHAGYGLGFERMIMYLTGIQN 448

Query: 339 INEVIWTPFS 348
           I +V+  P +
Sbjct: 449 IRDVLPFPRT 458


>gi|324326233|gb|ADY21493.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 428

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 107/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  ++ +EN F  I +  +    G E     F        + +
Sbjct: 120 RHERTAAIFKVKSTLVQSFSKFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 173

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E+ F  A  +R        H  E+  L+        + +
Sbjct: 174 KEAYLAQSPQFYKQMMVAGGLERAFEIAPVYRAEHHNSSRHLNEYISLDVEIGFINDFHE 233

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 234 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 274 TLLQ-AQEILKSKYRKESPIGDLDTEGEKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 332 PNNENPSITDSFDLLYKGLEITSGAQRIHNYEMLLTSF------KEKGLHPDKF--QSYL 383

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V      +N+ E    P  
Sbjct: 384 NTFRYGCPPHGGFGIGLERVVYKFLELSNVREASAFPRD 422


>gi|238810325|dbj|BAH70115.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 569

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 74/418 (17%), Positives = 129/418 (30%), Gaps = 91/418 (21%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  ++ ++ I  ++RE+  +N FI+I++  L   +P      R F      +D  
Sbjct: 125 RRPVMQQNIITKDKIMFAVREFMHQNDFIDIETPMLAKSTPEG---ARDFLVPTRNRDEF 181

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G EK + FA  +R+ +     QPEFT L+   +  + E  
Sbjct: 182 ---WALPQSPQLFKQLLMCSGFEKYYQFARCFRDEDSRKDRQPEFTQLDIETSFLNVEDF 238

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA-EAFARYANIDLGTTLDNPD- 190
            K    + +   +    KI +         +  +Y T   +    Y  +D+     N D 
Sbjct: 239 QKYIEKLFKHIFKSIGIKIKTPFPRVKYFDALRDYGTDKPDLRYDYKIVDINDFCLNTDF 298

Query: 191 -------------------QPDRHLLYLQAQ--QAGIRVAHDDTWSDIFSRILIEKIEP- 228
                              + D   L   A+  +A I         +I       K++  
Sbjct: 299 NIIKYAPSKRMLFVDTLITKKDFKDLEEIAKKNKANILFYFVYENGEIVHTNFANKVKDA 358

Query: 229 ----------NLGINCCTILDRYPAPESALANIYPADPRFTK---RFELYACNIELCNAC 275
                       G           A ++  A     + RF      + L           
Sbjct: 359 ALELVKNNKNKNGSYFIVANTYDHASQALGAVRVELNERFNYARKEWNLSWITDWPMFEY 418

Query: 276 DELLDPIEQRH----RFE---KEMQEKKKIYNETYPID---------------------- 306
           DE  +     H    RF    +E+ + +         D                      
Sbjct: 419 DEENNTWAAAHHPFTRFAHSLEELDKIEMKDVRALSYDLVLNGFELGSGSARIFDKKTQK 478

Query: 307 -----------------EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                            + FL      +P   GI +G DRL M++TG   I +VI  P
Sbjct: 479 KMFDLIGMSEKEQQSRFDWFLKAFDYGIPPHCGIGLGLDRLTMIITGQKTIRDVIAFP 536


>gi|229059887|ref|ZP_04197262.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228719432|gb|EEL71035.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 437

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 112/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  + +  +    G E     F        + +
Sbjct: 129 RHERIAAIFKVKSTLVQSFSEFLIENDFTRVFTPKIVSQ-GAEGGANVFKLP-----YFQ 182

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 183 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 242

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 243 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 282

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 283 TLLEAQEILKNKYRKESPMGDLDTEG-EKLLGKYVKETYDSE-FVFITHYPKEARPMYTM 340

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 341 PNKENEAITDSFDLLYKGLEITSGAQRIHNHEMLLASFKE-----KGLHPEKFQ---SYL 392

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 393 DTFRYGCPPHGGFGIGLERVVYRLLELSNVREASAFPRD 431


>gi|16081630|ref|NP_393995.1| asparaginyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|20139925|sp|Q9HKS7|SYN_THEAC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|10639687|emb|CAC11659.1| probable asparaginyl--tRNA synthetase [Thermoplasma acidophilum]
          Length = 429

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 117/349 (33%), Gaps = 43/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R   +     L  R+ I  S  ++F EN + ++ +  +  +   E     F 
Sbjct: 114 LDNRHLWLRSREFTS--VLKIRSTIFRSFADFFYENGYYQVQTPFMVSTAV-EGGSTLFK 170

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +        +P+YL  S +F  + ++ +  EK+F  A ++R  +     H  E+   E 
Sbjct: 171 VDF-----FGEPIYLNQSAQFYLETMIYS-LEKVFTIAPSFRAEKSRTRRHLTEYWHAEA 224

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A     ++M     +I        +       +        + +       RY+ I  
Sbjct: 225 EVAWIDNNEMMDIEERMIYYIVSRVTEDNEDELKMLNRDPEVLKAMKPPFPRIRYSEI-- 282

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                             A   G+ + + D       R +       +  +    +  YP
Sbjct: 283 ---------------IKVANSIGLPLKYGDDLGADEERQI------TMKYDRPIFVTNYP 321

Query: 243 APESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKKIYN 300
                      P +P      E+   ++       E++   ++   +++ M + ++   +
Sbjct: 322 KDLKPFYMPVDPENPG-----EVLNHDMLAPEGYGEIIGGSQRIWNYDELMQRIREANLD 376

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E+      ++          SG  +G DRL M +   +NI E I  P +
Sbjct: 377 ESAYY--WYVDLRKYGSVPHSGFGLGLDRLAMWIMHLDNIREAIPYPRT 423


>gi|291616925|ref|YP_003519667.1| AsnS [Pantoea ananatis LMG 20103]
 gi|291151955|gb|ADD76539.1| AsnS [Pantoea ananatis LMG 20103]
          Length = 466

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F EN +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFHENGYFWVSTPLITASDTEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +   +A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGKVDYSEDFFGKEAFLTVSGQLNGETYASA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  S +        +++   +    +    +  +   F+E         
Sbjct: 244 LAEFWMLEPEIAFASLDDAAALAEAMLKYVFKAVLDE----RADDMAFFAERVDNDAINR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D                       G    +  +W    S      +       
Sbjct: 300 LERFVTTDFAQVNYTD-------AVDILMNCGQTFENPVSWGIDLSSEHERYLAEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              +   YP    A       D +     ++ A  I E+               R E+  
Sbjct: 353 PVVVK-NYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARLEEMG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 412 LKKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 460


>gi|187777691|ref|ZP_02994164.1| hypothetical protein CLOSPO_01283 [Clostridium sporogenes ATCC
           15579]
 gi|187774619|gb|EDU38421.1| hypothetical protein CLOSPO_01283 [Clostridium sporogenes ATCC
           15579]
          Length = 463

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 102/357 (28%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+  ++  +  S       +   +T   
Sbjct: 122 AHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDL 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D    P  L  S + S +    A    ++ F   +R        H
Sbjct: 182 NNIPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALA-FRNVYTFGPTFRAENSNTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       + +  ++++                    F+      + + 
Sbjct: 241 ASEFWMIEPEMAFAELTDYLDNAEDMVKFVINYV----MENAPEEMAFFNSFVDKGLFDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D                    Q++G +  +   W           +   +   
Sbjct: 297 LDNVINSDFKRITYTE-------AVELLQKSGAKFDYPVEWGIDLQTEHERYLTEQIFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +     +L    + E+               R E+  
Sbjct: 350 PV-FVTDYPKDIKAFYMRLNDDGKTVAAADLLVPGVGEIIGGSQREERLDVLEKRMEELN 408

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+            +L        + SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 409 LNKEDY--------WWYLELRKYGETKHSGYGLGFERILMYITGMTNIRDVIPFPRT 457


>gi|163753787|ref|ZP_02160910.1| asparagine--tRNA ligase [Kordia algicida OT-1]
 gi|161326001|gb|EDP97327.1| asparagine--tRNA ligase [Kordia algicida OT-1]
          Length = 480

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 120/368 (32%), Gaps = 45/368 (12%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R       +  R+ +  ++ +YF +N F  + +  +  S       +  F    
Sbjct: 120 QAHLRTRTNTFSAVMRLRSSLSFAIHKYFNDNGFYYMHAPIITGSDAEGAGEM--FRVTT 177

Query: 67  IIQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
           +                 D   K   L  S +   +   A    K++ F   +R      
Sbjct: 178 LDPKNPPLNEEGNVDYTQDFFGKETNLTVSGQLEAETY-AMSLGKVYTFGPTFRAENSNT 236

Query: 112 -LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF---------QNVNCNP 161
             H  EF M+E   A    +  M    + ++       +              Q     P
Sbjct: 237 SRHLAEFWMIEPEVAFMDLDGNMDLAEDFMKSVLSYVLEHNADDLAFLENRLIQEDKTKP 296

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
            +E   +T+ E   R+   +    +   +  D        ++   +   ++  +D+ S  
Sbjct: 297 QAERSEMTLTEK-LRFVIDNNFKRVSYTEAIDILRNSKPNKKKKFKYIINEWGADLQSEH 355

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
               +E +    C  IL  YPA   A       D +  +  ++    I       E++  
Sbjct: 356 ERFLVEKH--FKCPVILFDYPANIKAFYMRLNEDEKTVRAMDILFPGI------GEIVGG 407

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
            ++  R +   ++   +      +   +L          SG  +GF+RLVM  TG +NI 
Sbjct: 408 SQREERLDVLKEKMAALDIPEEEL-WWYLELRKYGTAVHSGFGLGFERLVMFATGMSNIR 466

Query: 341 EVIWTPFS 348
           +VI  P +
Sbjct: 467 DVIPYPRT 474


>gi|319892446|ref|YP_004149321.1| Asparaginyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162142|gb|ADV05685.1| Asparaginyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464451|gb|ADX76604.1| asparaginyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 430

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 106/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F EN F +ID   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEIIRATYEFFNENGFTKIDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDEDAFLSQSGQLYMEAAAMAY-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++E+ ++     +    +   +                      +   +    D
Sbjct: 224 PEMAFTTHEESLEVQEAYVSYVVQSVLKNC--------------------QIELKLLERD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +        D  W D F       I  +   +    +  Y
Sbjct: 264 TSKLEKVQAPFPRISYDDAIKFLHEAGFDDIKWGDDFGAPHETAIANHY--DLPVFIVNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P           P +       +L A     E+    + + D      R ++      ++
Sbjct: 322 PTKIKPFYMQPNPENEDTVLCADLIAPEGYGEIIGGSERINDLELLEQRIDE-----HQL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E+Y    D           SG  +G +R V  + G  ++ E    P  
Sbjct: 377 DTESYQYYLDLRK--YGSVPHSGFGLGLERTVAWIAGVEHVRETSPFPRL 424


>gi|160944973|ref|ZP_02092199.1| hypothetical protein FAEPRAM212_02488 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442704|gb|EDP19709.1| hypothetical protein FAEPRAM212_02488 [Faecalibacterium prausnitzii
           M21/2]
          Length = 462

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/368 (15%), Positives = 113/368 (30%), Gaps = 48/368 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE 56
           +  +P+          R   F      R++   ++ ++F EN F+   S  +  S     
Sbjct: 119 LRTMPT-------LRPRTNTFNAAFRVRSVAAYAIHKFFQENGFVYAHSPLITASDCEGA 171

Query: 57  THI---------RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHA 103
             +             TE    D+      KP+ L  S +    + +A    K++ F   
Sbjct: 172 GEMFRVTTLDLDNVPKTEDGAVDYSKDFFEKPVNLTVSGQLEA-EAMAMAFGKVYTFGPT 230

Query: 104 WRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           +R  +     H  EF M+E   A       M +   +I+                    F
Sbjct: 231 FRAEKSFTTRHAAEFWMIEPEMAFCDLNGYMDNAEAMIKYVIRYV----LDNCPDEMAFF 286

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
           ++     + E     AN +                    ++   +  +   W        
Sbjct: 287 NQFIDKGLVERLELVANSEFARISYTE-------AIEILKKNNKKFQYPVEWGVDIQTEH 339

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDP 281
              +   +       +  YP    +      AD +     ++    I EL        D 
Sbjct: 340 ERYLTEVVYKKPV-FVTDYPKEIKSFYMKQNADGKTVAAADMLVPGIGELIGGSQREEDY 398

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
            +   R ++         ++T    E +L        + +G  +GF+R++M +TG  NI 
Sbjct: 399 GKLVARMDE------LGMDKTNY--EWYLNLRKFGGVEHAGYGLGFERMIMYLTGIQNIR 450

Query: 341 EVIWTPFS 348
           +V+  P +
Sbjct: 451 DVLPFPRT 458


>gi|306820427|ref|ZP_07454063.1| asparagine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551502|gb|EFM39457.1| asparagine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 464

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/356 (14%), Positives = 108/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+   +  +  S       +   +T   
Sbjct: 123 AHLRPRANAFSAVFRVRSIAAYAVHKFFQEKNFVYAHTPIITASDAEGAGEMFQVTTLDM 182

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S +    ++ A   + ++ F   +R        H
Sbjct: 183 NNLPKNQEGKIDFKEDFFDKETHLTVSGQLEA-EIFAMAFKNVYTFGPTFRAENSNTARH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  + ++ M     +++                    F+      + E 
Sbjct: 242 AAEFWMIEPEIAFATLQENMDVAEEMVKFIIRYC----LENAKEEMEFFNSFVDKGLFER 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                        +  ++          Q +G +  +   W           +   +   
Sbjct: 298 LNNIL-------ENKFERITYTKAVELLQNSGQKFEYKVEWGIDLQTEHERYLTEQIFKK 350

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  YP    A       D +     +L    +       E++   ++  R +   +
Sbjct: 351 PV-FVTDYPEKIKAFYMRSNDDGKTVAAMDLLVPGV------GEIIGGSQREERLDILEK 403

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + K    +       +L        + SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 404 KIKDNNLDRETY-WWYLELRKYGGVKHSGYGLGFERMIMYLTGMQNIRDVIAFPRT 458


>gi|253579111|ref|ZP_04856382.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850054|gb|EES78013.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 448

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 108/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + + R     +  +  + R+Y     F EI +  +         ++  FS       + 
Sbjct: 140 RNIQERSKFKIQEALTKAFRDYLYGQGFTEIHTPKIGARGAEGGANLFKFS-------YF 192

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            KP  L  SP+F  +  +    +++F     +R  +     H  E+T L++   +    +
Sbjct: 193 HKPAVLAQSPQFYKQM-MVGVFDRVFETGPVFRAEKHNTKRHLNEYTSLDFEMGYIDSFE 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +          A    +                   T      +   +D+      P  
Sbjct: 252 EIMAMETGFLQYAMNLLK-------------------TEYAKEVQILKLDIPDVSKIPAV 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  L +Q+   ++ +          ++ +  +   G +    +  YP+ +     +
Sbjct: 293 RFDVAKELVSQKYNRKIRNPFDLEPEEEALIGQYFKEEYGSD-FVFVTHYPSKKRPFYAM 351

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               D RFT  F+L    +E+      + D      + E      + +  E     E +L
Sbjct: 352 DDPEDARFTLSFDLLFKGLEITTGGQRIHDYNMLVQKIED-----RGMTQEGM---EQYL 403

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G+ +G +RL M + G  N+ E    P  
Sbjct: 404 DTFKHGMPPHGGLGIGLERLTMQLIGEENVRETCLFPRD 442


>gi|24379727|ref|NP_721682.1| asparaginyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|290580275|ref|YP_003484667.1| putative asparaginyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|38258370|sp|Q8DTM2|SYN_STRMU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|24377687|gb|AAN58988.1|AE014965_9 putative asparaginyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|254997174|dbj|BAH87775.1| putative asparaginyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 448

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 113/351 (32%), Gaps = 39/351 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    ++   +  RN +  +  E+F +N F++ DS  L    GN       +
Sbjct: 125 MDHRHLWLRSR--KQMAIMQIRNAVIYASYEFFDQNGFVKFDSPILS---GNAAEN---T 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T+L   D+  +P +L  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TDLFETDYFGEPAFLSQSGQLYLEAGAMA-FGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                S+EQ +      ++   +                   P+ + + E         +
Sbjct: 236 EYPFMSHEQSLDLQEAYVKTLIQGVLD-------------RAPQALGILERDTDLLRKYI 282

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                     D   L  + ++            D F       I    GI   T +  YP
Sbjct: 283 AQPFKRVSYDDAITLLQEHEEDEDTDYEHIEHGDDFGSPHETWISNYFGI--PTFVVNYP 340

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF-EKEMQEKKKI-- 298
           A   +      P +P      +L            E++   E+   +     + K+    
Sbjct: 341 ASLKAFYMKPVPGNPDRVLCADL-----LAPEGYGEIIGGSERETDYNTLLAKIKENGLN 395

Query: 299 -YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +  + +D              G  +G +R+V  V G  +I E I  P  
Sbjct: 396 PDDYAFYLDLRQ----YGSVPHCGFGLGLERMVTFVAGTKHIREAIPFPRM 442


>gi|326496086|dbj|BAJ90664.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 535

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 101/368 (27%), Gaps = 56/368 (15%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R R          RN +  +   +F +N FI + S  +  S       + + T L+ 
Sbjct: 185 AHLRPRTNTFGAVARVRNALAYATHNFFQDNGFIWVSSPIITASDCEGAGEQFYVTTLLS 244

Query: 69  QDHIR----------------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
                                      KP +L  S + + +   +A    I+ F   +R 
Sbjct: 245 NSAEGGCLVNSIPSKDGRVDWSQDFFCKPAFLTVSGQLNGETYASA-LSDIYTFGPTFRA 303

Query: 107 GEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
                  H  EF M+E   A       M      ++   +   +                
Sbjct: 304 ENSNTSRHLAEFWMIEPELAFADLNDDMACASAYLQYVVKYILENCK------------- 350

Query: 166 EYITVAEAFARYANID--LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
           E +   + +     ID        N  Q            +  +      W         
Sbjct: 351 EDMDFFDTWVEKGIIDRLNNVAEKNFVQMSYSDAIKLLIGSNKKFEFPVKWGLDLQSEHE 410

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             I          I+  YP    A       D +     +L    +       EL+   +
Sbjct: 411 RYITEVAFGGHPVIIRDYPKEIKAFYMRQNDDGKTVAAMDLLVPRV------GELIGGSQ 464

Query: 284 QRHRFEKEMQEKKKIYNETYPID--EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +  R +     + ++       D    +L          +G  +GF+RLV   TG +NI 
Sbjct: 465 REERLDY---LEARLDESNLNKDSYWWYLDLRRYGSVPHAGFGLGFERLVQFATGIDNIR 521

Query: 341 EVIWTPFS 348
           + I  P  
Sbjct: 522 DAIPFPRV 529


>gi|296450337|ref|ZP_06892096.1| asparagine--tRNA ligase [Clostridium difficile NAP08]
 gi|296878749|ref|ZP_06902752.1| asparagine--tRNA ligase [Clostridium difficile NAP07]
 gi|296260830|gb|EFH07666.1| asparagine--tRNA ligase [Clostridium difficile NAP08]
 gi|296430256|gb|EFH16100.1| asparagine--tRNA ligase [Clostridium difficile NAP07]
          Length = 465

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 109/359 (30%), Gaps = 47/359 (13%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+   S  +  S       +   +T  +
Sbjct: 124 AHLRPRSNTFSAVFRVRSIAAYAIHKFFQERNFVYAHSPIITGSDCEGAGEMFRITTMDL 183

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K   L  S +    +++A     ++ F   +R        H
Sbjct: 184 NDIPKTEDGKIDYTQDFFGKEANLTVSGQL-NAEIMALSFRNVYTFGPTFRAENSYTGRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E        E  M+   ++I+                    F+      + E 
Sbjct: 243 ASEFWMIEPEIVFADLEDNMELAEDMIKYVISYV----LENAPEEMEFFNSFIDKGLLER 298

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             +  N +                     ++G    +   W           I   +  N
Sbjct: 299 LNKIVNSEFVRITYT-------KAVELLIESGHDFEYPVEWGCDLQTEHERYITEQI-YN 350

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
           C   +  YP    A       D +  +  +L    +              QR   E  + 
Sbjct: 351 CPVFVTDYPKDIKAFYMRMNEDGKTVRAMDLLVPGVGEIVGGS-------QREEREDVLL 403

Query: 294 EKKKIYNETYPIDEDFLACLT----EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++    NE    +ED+   L          SG  +GF+R++M +TG +NI +VI  P +
Sbjct: 404 DRI---NEMGLREEDYWWYLELRKFGTATHSGFGLGFERIIMYMTGMSNIRDVIPFPRT 459


>gi|118399659|ref|XP_001032154.1| asparaginyl-tRNA synthetase family protein [Tetrahymena
           thermophila]
 gi|89286492|gb|EAR84491.1| asparaginyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 618

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 65/366 (17%), Positives = 107/366 (29%), Gaps = 48/366 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  L       RN +  +   YF  N F  I +  +  S       +   +T L 
Sbjct: 264 AHLRPRSNLIGCVARIRNNLAYATHIYFQSNGFQYIHTPLITASDCEGAGEMFQVTTTLP 323

Query: 68  IQ----------------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                                   D  +KP +L  S + S +    A    ++ F   +R
Sbjct: 324 KPEESLLKVKDKVLDKEGRIDYSKDFFKKPAFLTVSGQLSVENYCCA-LSNVYTFGPTFR 382

Query: 106 NG-EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                   H  EF M+E   A      +M      ++   E       S      N   +
Sbjct: 383 AEVSHTTRHLAEFWMIEPELAFADVHDVMDCAEGYVKFCLEYVLTNNKSDLEFLQNALKK 442

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
           PE +        Y    +          D   L  +A   G    +   W +  +     
Sbjct: 443 PELV-------EYLKGLISGPFARLSYTDAITLLQKAVANGKVFENKVEWGEELATEHER 495

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +   +       +  YP    A       D +    F        L     EL+   ++
Sbjct: 496 FLAE-VVFKKPVAVYNYPKGFKAFYMRLNEDGKTVAAF------DMLAPQVGELIGGSQR 548

Query: 285 RHRFE-KEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
             R +  E +  +   N        +L           G  +GF+RL ML +G +N+ +V
Sbjct: 549 EERLDVLEKRMIESGLNPADY--WWYLDLRRYGTVPHGGFGLGFERLCMLCSGVDNVRDV 606

Query: 343 IWTPFS 348
           I  P +
Sbjct: 607 IPFPRT 612


>gi|21231015|ref|NP_636932.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768980|ref|YP_243742.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|24212400|sp|Q8PAC4|SYN_XANCP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|81305056|sp|Q4UTA1|SYN_XANC8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21112638|gb|AAM40856.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574312|gb|AAY49722.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 464

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 107/372 (28%), Gaps = 48/372 (12%)

Query: 1   MHQIPSQPWWNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMSPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL---------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIF 98
                +  F                     +D   K  +L  S + + +    A   K++
Sbjct: 169 EGAGQM--FRVSSLDMVNLPRTAQGEVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVY 225

Query: 99  CFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
            F   +R        H  EF M+E   A     +  +     ++        +       
Sbjct: 226 TFGPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAF 285

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
                   E +         A I+        +Q D        Q +G +      W   
Sbjct: 286 LA------ERVDKNAISKLEAFINAP-----FEQIDYTEAVKLLQNSGKKFDFPVEWGLD 334

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
                   +     I    ++  YP    A       D +             L     E
Sbjct: 335 LQTEHERWLTEEH-IGRPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGE 387

Query: 278 LLDPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTG 335
           ++   ++  R +          +  E Y    DF          +G  +GF+RLV+ V G
Sbjct: 388 IIGGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCG 445

Query: 336 ANNINEVIWTPF 347
            +NI + I  P 
Sbjct: 446 LSNIRDAIPYPR 457


>gi|319777419|ref|YP_004137070.1| aspartyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038494|gb|ADV34693.1| Aspartyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 569

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 74/418 (17%), Positives = 129/418 (30%), Gaps = 91/418 (21%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  ++ ++ I  ++RE+  +N FI+I++  L   +P      R F      +D  
Sbjct: 125 RRPVMQQNIITKDKIMFAVREFMHQNDFIDIETPMLAKSTPEG---ARDFLVPTRNRDEF 181

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G EK + FA  +R+ +     QPEFT L+   +  + E  
Sbjct: 182 ---WALPQSPQLFKQLLMCSGFEKYYQFARCFRDEDSRKDRQPEFTQLDIETSFLNVEDF 238

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA-EAFARYANIDLGTTLDNPD- 190
            K    + +   +    KI +         +  +Y T   +    Y  +D+     N D 
Sbjct: 239 QKYIEKLFKHIFKSIGIKIKTPFPRVKYFDALRDYGTDKPDLRYDYKIVDINDFCLNTDF 298

Query: 191 -------------------QPDRHLLYLQAQ--QAGIRVAHDDTWSDIFSRILIEKIEP- 228
                              + D   L   A+  +A I         +I       K++  
Sbjct: 299 NIIKYAPSKRMLFVDTLITKKDFKDLEEIAKKNKANILFYFVYENGEIVHTNFANKVKDA 358

Query: 229 ----------NLGINCCTILDRYPAPESALANIYPADPRFTK---RFELYACNIELCNAC 275
                       G           A ++  A     + RF      + L           
Sbjct: 359 ALELVKNNKNKNGSYFIVANTYDHASQALGAVRVELNERFNYARKEWNLSWITDWPMFEY 418

Query: 276 DELLDPIEQRH----RFE---KEMQEKKKIYNETYPID---------------------- 306
           DE  +     H    RF    +E+ + +         D                      
Sbjct: 419 DEENNTWAAAHHPFTRFAHSLEELDKIEMKDVRALSYDLVLNGFELGSGSARIFDKKTQK 478

Query: 307 -----------------EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                            + FL      +P   GI +G DRL M++TG   I +VI  P
Sbjct: 479 KMFDLIGMIEKEQQSRFDWFLKAFDYGIPPHCGIGLGLDRLTMIITGQKTIRDVIAFP 536


>gi|298527829|ref|ZP_07015233.1| asparaginyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511481|gb|EFI35383.1| asparaginyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 459

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/354 (14%), Positives = 102/354 (28%), Gaps = 40/354 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++ +YF E  F  I +  +  S          F    +
Sbjct: 121 AHLRPRTNKYGAMNRIRSELSFAVHQYFRERGFYYIHTPIITGSDCEGAG--DMFVVTAL 178

Query: 68  IQD-------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
             D          +  +     L  S +    + +A     ++ F   +R        H 
Sbjct: 179 DPDKAWKSPAEFGRDFFGKKAHLTVSGQLPA-ESMACALGDVYTFGPTFRAENSNTSKHA 237

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       ++D M + +   +     +  + + +   FS      + +  
Sbjct: 238 AEFWMVEPEVAFAD----LQDIMEMAQGFVQALTGHVKKYCSQDLELFSRFVDQGLEDRL 293

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                          ++          Q  G    +   W           +        
Sbjct: 294 -------DSVLSQPFERISYTRALEVLQDCGRTFEYPVQWGLDLQTEHERFLCEEHFHKP 346

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YPA           D       ++    +       +  + +E   R  +E   
Sbjct: 347 L-IVHDYPAGIKPFYMRVNDDSSTVAAMDVLLPRVGEIIGGSQREERLEVLDRRIQEAGL 405

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +  D   L         +G  +GF+RL+M +TG +NI +VI  P +
Sbjct: 406 --SFDEYWWYRD---LRRF-GSVPHAGFGLGFERLLMFITGVSNIRDVIPFPRT 453


>gi|153938311|ref|YP_001389961.1| asparaginyl-tRNA synthetase [Clostridium botulinum F str.
           Langeland]
 gi|166231661|sp|A7GB01|SYN_CLOBL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|152934207|gb|ABS39705.1| asparagine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295318046|gb|ADF98423.1| asparagine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 463

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 103/357 (28%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+  ++  +  S       +   +T   
Sbjct: 122 AHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDL 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D    P  L  S + S +    A    ++ F   +R        H
Sbjct: 182 NNIPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALA-FRNVYTFGPTFRAENSNTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       + +  N+++                    F+      + + 
Sbjct: 241 ASEFWMIEPEMAFAELTDYLDNAENMVKFVINYV----MENAPEEMAFFNSFVDKGLFDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D                    Q++G +  ++  W           +   +   
Sbjct: 297 LDNVVNSDFKRITYTE-------AVELLQKSGGKFDYEVEWGIDLQTEHERYLTEQIFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +     +L    + E+               R E+  
Sbjct: 350 PV-FVTDYPKDIKAFYMRLNDDGKTVAAADLLVPGVGEIIGGSQREERLDVLEKRMEELN 408

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+            +L        + SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 409 LNKEDY--------WWYLELRKYGETKHSGYGLGFERILMYITGMTNIRDVIPFPRT 457


>gi|255037962|ref|YP_003088583.1| asparaginyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254950718|gb|ACT95418.1| asparaginyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 479

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 111/364 (30%), Gaps = 42/364 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       L  R+ +  ++ +YF E  F  + +  +  S       +  F    +
Sbjct: 121 AHLRPRTNTFSAILRIRHALAFAVHQYFNEKGFFYLHTPVITASDAEGAGEM--FRVTTL 178

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +++ +            +     L  S +    +L A    KI+ F   +R       
Sbjct: 179 DLNNLPRTEEGAINFKEDFFGREANLTVSGQL-EGELGAMALSKIYTFGPTFRAENSNTT 237

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E  M    + ++     A        N   N   E E     
Sbjct: 238 RHLAEFWMIEPEMAFFELEDNMDLAEDFVKKVITYALINCKDDLNFLQNRLIEEEKNKPQ 297

Query: 172 EAF------ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
                         +D         +    LL  + Q+ G        W    S      
Sbjct: 298 NERSLPLLEKLAFVVDNPFERLTYTEAIEILLKSKPQKEGKFQFPVTGWGIDLSSEHERY 357

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           +          IL  YP    +       D +  +  ++    I       E++   ++ 
Sbjct: 358 LVEKHFKKPV-ILTNYPREIKSFYMKLDEDGKTVRAMDVLFPGI------GEIIGGSQRE 410

Query: 286 HRFEKEM-QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             +EK + + K+   +        +L          SG  +GF+RLV  VTG  NI +VI
Sbjct: 411 ESYEKLLGRVKEIGIDPENL--WWYLETRKFGTAPHSGFGLGFERLVQFVTGMGNIRDVI 468

Query: 344 WTPF 347
             P 
Sbjct: 469 PFPR 472


>gi|119595468|gb|EAW75062.1| asparaginyl-tRNA synthetase 2 (mitochondrial)(putative), isoform
           CRA_b [Homo sapiens]
          Length = 469

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 104/349 (29%), Gaps = 38/349 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H+R R       L  R+   +++  +F ++ F+ I +  +  +       +  F  E   
Sbjct: 136 HFRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGEL--FQLEPSG 193

Query: 69  ------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                 ++    P +L  S +    ++++    ++F F   +R        H  EF M+E
Sbjct: 194 KLKVPEENFFNVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIE 252

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +     Q +   +  +  A  +            C+ F  P      E   +     
Sbjct: 253 AEISFVDSLQDLMQVIEELFKATTMMVLSKCPEDVELCHKFIAPGQKDRLEHMLK----- 307

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                +N             +QA         W         + +  + G      +  Y
Sbjct: 308 -----NNFLIISYTEAVEILKQASQNFTFTPEWGADLRTEHEKYLVKHCGNIPV-FVINY 361

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR--FEKEMQEKKKIY 299
           P            D        +      L     EL     +  R  F +E   +  + 
Sbjct: 362 PLTLKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGGLREERYHFLEERLARSGLT 417

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                + + +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 418 E----VYQWYLDLRRFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 462


>gi|169595242|ref|XP_001791045.1| hypothetical protein SNOG_00355 [Phaeosphaeria nodorum SN15]
 gi|111070730|gb|EAT91850.1| hypothetical protein SNOG_00355 [Phaeosphaeria nodorum SN15]
          Length = 551

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 114/341 (33%), Gaps = 30/341 (8%)

Query: 13  DFHYR-RRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQD 70
           D   +  +   + ++ + +  +E+  +  F+ + +   L  +     +       +    
Sbjct: 230 DLRAKINQSIFVIKSGVCAIFQEFLSKKGFVLVHTPKILGAASEGGAN-------VFELK 282

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESY 129
           +  +P YL  SP+F  + L+A+  +K+      +R        H  EFT L+     +  
Sbjct: 283 YFDRPAYLAQSPQFYKQMLIASRFQKVMEIGPVFRAENSNTARHLTEFTGLDLEMEFQEN 342

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              +   +  +           F F  +N     E E +        +   + G     P
Sbjct: 343 YHEVIRVLEDLML---------FIFTELNARYKKETELVRGVYHVDEFKLPESGKVPRIP 393

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA-L 248
                       ++AG  +   D  S    ++L + +      +    LD++P       
Sbjct: 394 ----FKEGIAMLREAGEELNDYDDLSTPQEKLLGKLVLQKYNTD-FYTLDQFPLAIRPAY 448

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
               PADP  +  ++++    E+C+    + D          +M++     +      +D
Sbjct: 449 TMPSPADPLLSNSYDMFMRGQEICSGAQRIHDS----KLLASQMRKHDPPIDPESAGTKD 504

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++ C     P   G   G +R+V    G  NI      P  
Sbjct: 505 YVDCFRFGCPPHGGGGFGLERIVQFWLGLPNIRMCSLFPRD 545


>gi|193787014|dbj|BAG51837.1| unnamed protein product [Homo sapiens]
          Length = 477

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 104/349 (29%), Gaps = 38/349 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H+R R       L  R+   +++  +F ++ F+ I +  +  +       +  F  E   
Sbjct: 144 HFRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGEL--FQLEPSG 201

Query: 69  ------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                 ++    P +L  S +    ++++    ++F F   +R        H  EF M+E
Sbjct: 202 KLKVPEENFFNVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQNRRHLAEFYMIE 260

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +     Q +   +  +  A  +            C+ F  P      E   +     
Sbjct: 261 AEISFVDSLQDLMQVIEELFKATTMMVLSKCPEDVELCHKFIAPGQKDRLEHMLK----- 315

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                +N             +QA         W         + +  + G      +  Y
Sbjct: 316 -----NNFLIISYTEAVEILKQASQNFTFTPEWGADLRTEHEKYLVKHCGNIPV-FVINY 369

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR--FEKEMQEKKKIY 299
           P            D        +      L     EL     +  R  F +E   +  + 
Sbjct: 370 PLTLKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGGLREERYHFLEERLARSGLT 425

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                + + +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 426 E----VYQWYLDLRRFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 470


>gi|118477616|ref|YP_894767.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196046105|ref|ZP_03113333.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|118416841|gb|ABK85260.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196023160|gb|EDX61839.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 432

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 111/342 (32%), Gaps = 46/342 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTASIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVEIGFINDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF---SRILIEKIEPNLGINCCTILDRYPAPESAL 248
                  +      I+   +    D+     ++L + ++          +  YP     +
Sbjct: 278 TLLQAQEI----LKIKYRKESPIGDLDTEGEKLLGKYVKETYKSE-FVFITHYPKEARPM 332

Query: 249 A-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                  +P  T  F+L    +E+ +    + +       F      K+K  +      +
Sbjct: 333 YTMPNNENPSITDSFDLLYKGLEITSGAQRIHNYEMLLTSF------KEKGLHPDKF--Q 384

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +L       P   G  +G +R+V      +N+ E    P  
Sbjct: 385 SYLNTFRYGCPPHGGFGIGLERVVYKFLELSNVREASAFPRD 426


>gi|228952555|ref|ZP_04114631.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228807021|gb|EEM53564.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 428

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 120 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 173

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 174 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 233

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 234 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPVITEIPKI 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 274 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKEIYNSE-FVFITHYPKKARPMYTM 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 332 PNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASF------KEKGLHPDKF--QSYL 383

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 384 NTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 422


>gi|206972146|ref|ZP_03233094.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229079384|ref|ZP_04211926.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229178583|ref|ZP_04305947.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|206733069|gb|EDZ50243.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228604741|gb|EEK62198.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228703917|gb|EEL56361.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 432

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKKC--------------------EIELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 TLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKEIYNSE-FVFITHYPKKARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 426


>gi|126651186|ref|ZP_01723396.1| asparaginyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126592024|gb|EAZ86090.1| asparaginyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 431

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/352 (17%), Positives = 112/352 (31%), Gaps = 48/352 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    ++   +  RN I  +  E+F  N F ++D   L   SP   + +  F
Sbjct: 115 MDNRHLWLRSR--KQHAIMKVRNEIIRATYEFFNNNGFTKMDPPILTGSSPEGTSEL--F 170

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 171 HTK-----YFDEDAFLSQSGQLYM-EAAAMALGKVFSFGPTFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E+ ++     +    +              N   E E +             
Sbjct: 225 PEMAFVEFEENLEVQEQYVTHIVQSVL----------ANCKLELERLDR----------- 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCCTILDR 240
             + L+N   P   + Y  A +       DD  W D F       I      +    +  
Sbjct: 264 DTSKLENIKAPFPRISYDDAIKLLHEQGFDDIEWGDDFGAPHETAIA--NSFDKPVFITC 321

Query: 241 YPA-PESALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           YP   +      +P         +L A     E+    + + D    + R E+       
Sbjct: 322 YPVGIKPFYMQPHPDRDDVVLCADLIAPEGYGEIIGGSERIHDYDLLKSRLEEHNLSLDA 381

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                      +L          SG  +G +R V  ++G  +I E I  P  
Sbjct: 382 Y--------AWYLELRKHGSVPHSGFGLGLERTVAWISGTEHIRETIPFPRL 425


>gi|219120825|ref|XP_002185644.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582493|gb|ACI65114.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 579

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 113/346 (32%), Gaps = 34/346 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
              W        +      +M+    RE+ ++  F+EI +  L    G  +   +   ++
Sbjct: 258 DYRWIDLRTPANQSIFRIESMVGCLFREFLLQRGFVEIHTPKLI---GGASEGGS---DV 311

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
              D+  +   L  SP+   +     +G E++F     +R        H  EFT L+   
Sbjct: 312 FTLDYFGQSACLAMSPQLHKQMTAACSGFERVFETGPVFRAENSNTRRHLCEFTGLDLEM 371

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
               +                    ++F +     N   +PE     E        +   
Sbjct: 372 VIHEHYDE-----------VLAVMSELFIYIFDGVNERCKPE----LERVREQHPFEDLQ 416

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
            L    +          ++AGI   + +  S    + L + ++   G +    LD++P  
Sbjct: 417 YLSPTLKLTFAEGCALLREAGIDQDNYEDLSTENEKKLGDIVKQKYGTD-FFFLDKFPLA 475

Query: 245 ESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                    P DP+ +  ++ +    E+ +    + DP     R      +   I  E+ 
Sbjct: 476 VRPFYTMPDPNDPKLSNSYDFFIRGQEIVSGAQRVHDPDLIEER-----AKALGIDVESI 530

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D++           G  +G +R+VML  G  NI +  W P  
Sbjct: 531 ---ADYVESFRHGALPHGGGGIGLERVVMLFLGLPNIRKAAWFPRD 573


>gi|169602527|ref|XP_001794685.1| hypothetical protein SNOG_04267 [Phaeosphaeria nodorum SN15]
 gi|160706191|gb|EAT88027.2| hypothetical protein SNOG_04267 [Phaeosphaeria nodorum SN15]
          Length = 857

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 112/335 (33%), Gaps = 28/335 (8%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               ++ I S  R       FIEI +  LQ     E+    F       D+  +  +L  
Sbjct: 383 IFRIQSGICSLFRAQLDSEGFIEIHTPKLQG-GATESGASVFKI-----DYFGRGAFLAQ 436

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+ + +  ++A   K++     +R        H  E+T L+     + +   +   ++ 
Sbjct: 437 SPQLAKQMAISADFGKVYEIGAVFRAENSNTYRHLTEYTGLDLEMQIDEHYHEVLRVLDR 496

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
              A      + +  +          E +   +     A  D    L+     D      
Sbjct: 497 TFKAIFKGVYERYRPEIEIIKKHFPHEDLVWLDETPVLAFADAVKMLNESGWRDDE---- 552

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRF 258
                G  +  ++         L   I+  LG +   ILD++PA          P +P  
Sbjct: 553 -----GKELDVNEDLGTRDEVQLGRVIKQKLGTD-YYILDKFPANARPFYAMPDPNNPNV 606

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           T  F+++    E+ +    + D      +       K K+  ++    E+++       P
Sbjct: 607 TNSFDIFCRGQEILSGGQRIHDADMLLEKM-----RKMKVDPQSM---EEYIQGFQWGAP 658

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              G  +G +R++ML+    NI      P  +  +
Sbjct: 659 PHGGGGIGLERILMLMMSLGNIRHASMFP-PRPQE 692


>gi|260591211|ref|ZP_05856669.1| asparagine--tRNA ligase [Prevotella veroralis F0319]
 gi|260537076|gb|EEX19693.1| asparagine--tRNA ligase [Prevotella veroralis F0319]
          Length = 463

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 100/351 (28%), Gaps = 35/351 (9%)

Query: 13  DFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
               R   F      R+ +  ++ +YF ++ +    +  +  S      ++  F    + 
Sbjct: 121 HMRLRTNTFGAVFRIRHNMAIAIHKYFHDHGYYYFHTPLITGSDAEGAGNM--FQVTTLD 178

Query: 69  QD--------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
            D              +     L  S +   +    +    I+ F   +R        H 
Sbjct: 179 LDRIAKNGEVDYSADFFGKRTNLTVSGQLEGELGATS-LGAIYTFGPTFRAENSNTPRHL 237

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    ++LM    + I+     A          +    ++     +    
Sbjct: 238 AEFWMVEPEVAFIDKDELMDLEEDFIKYCVRWA----LENCKDDLEFLNKMIDKGLIARL 293

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                 D              L    A              D+ S      +E       
Sbjct: 294 EGVLKEDFVRLTYTEGIEI--LQKAVADGVKFEFPITGWGMDLSSEHERYLVEE--YFKR 349

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YP+   +       D +  +  ++   +I       E++    +   ++K + E
Sbjct: 350 PVIMTDYPSEIKSFYMKKNPDGKTMQGTDVLFPHI------GEIIGGSVREENYDKLLAE 403

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 +    D              G  +GF+RL++ VTG  NI +VI  
Sbjct: 404 IDNRGMKREVYDWYLDTRKYGTCPHGGFGLGFERLILFVTGMQNIRDVIPF 454


>gi|197123222|ref|YP_002135173.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196173071|gb|ACG74044.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 434

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/345 (17%), Positives = 112/345 (32%), Gaps = 39/345 (11%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W R    R++  L  R+ ++ ++R++F +  F  +D+     S    T     ST  
Sbjct: 120 RHLWLRS--QRQQVILRVRHTVEKAIRDFFDQRGFTLVDAPIFTPSACEGT-----STLF 172

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
            +        YL  S +    +  A    K++CF   +R  +     H  EF M+E   A
Sbjct: 173 EVPYFDLGKAYLTQSGQLYM-EAAAMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVA 231

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
           +   +  M+     +    + A +K               E  TV E           + 
Sbjct: 232 YMDLDGDMELMEQFVSYVVQTALEKH------------RVELATVLERDV--------SL 271

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           L+    P   + Y  A +   +  H   W D         +      +   ++ RYPA  
Sbjct: 272 LEKVKPPFPRITYTDAVEVIQKAGHPMKWGDDIGGDEETVVAKQ--FDRPVMVHRYPAEM 329

Query: 246 -SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            +      P+DP+             L       +    QR      ++   + +     
Sbjct: 330 KAFYFKKDPSDPKVA------LGCDVLAPEGYGEIIGGGQREDDLATLEAAIEHHQLPKQ 383

Query: 305 IDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E +L          +G  MG +R V  + G +++ E I     
Sbjct: 384 AFEWYLDLRRYGTVPHAGFGMGVERCVAWICGLHHVRETIPFARM 428


>gi|282880896|ref|ZP_06289589.1| asparagine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305278|gb|EFA97345.1| asparagine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 464

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 116/361 (32%), Gaps = 42/361 (11%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
            +  H R R       +  R+ +  ++ +YF ++ +    +  +  S       +  F  
Sbjct: 117 RQHAHLRLRTNTFGAVMRIRHNMAIAIHKYFHDHGYFYFHTPIITASDAEGAGEM--FQV 174

Query: 65  ELIIQDHI----------RKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
                +++              +     L  S +   +    A   +I+ F   +R    
Sbjct: 175 TTQDLNNLQRDEQGKVKYDDDFFGKMTSLTVSGQLEGELGATA-LGQIYTFGPTFRAENS 233

Query: 110 -GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A    + LM      I+   + A          NC    E    
Sbjct: 234 NTPRHLAEFWMIEPEIAFTDLDDLMGIEEEFIKYCVQWALD--------NCKDDLEFLNK 285

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            + +         +  +    D  +   +  +A ++G +  +  +W    +      +  
Sbjct: 286 MIDKTLLTRLQSVVNGSFVRLDYSEGIKILEEAVKSGQKFEYPVSWGMDLASEHERYLVE 345

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +       I+  YP    A       D +  +  ++    I       E++    +   +
Sbjct: 346 HHFKKPV-IMYNYPKEIKAFYMKINEDGKTVQGTDVLFPQI------GEIIGGSVREESY 398

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           EK + E +  +     +   +L           G  +GF+RL++ VTG  NI +VI  P 
Sbjct: 399 EKLLGEIEHRHIPMKDM-WWYLDTRKFGSCPHGGFGLGFERLILFVTGMQNIRDVIPFPR 457

Query: 348 S 348
           +
Sbjct: 458 T 458


>gi|206975106|ref|ZP_03236020.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|229138920|ref|ZP_04267499.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|206746527|gb|EDZ57920.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|228644545|gb|EEL00798.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 428

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 106/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++    S  E+  EN F  I +  +    G E     F        + +
Sbjct: 120 RHERIAAIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 173

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 174 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVEIGFINDFHE 233

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   ++++   +   +                      E   +   I++    + P  
Sbjct: 234 VMQLETDVLQYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 274 TLLQ-AQEILKSKYRKESPIGDLDTEGEKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 332 PNNENPSITDSFDLLYKGLEITSGAQRIHNYEMLLASF------KEKGLHPDKF--QSYL 383

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 384 NTFRYGCPPHGGFGIGLERVVCKLLELTNVREASAFPRD 422


>gi|222874194|gb|EEF11325.1| predicted protein [Populus trichocarpa]
          Length = 178

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 8/178 (4%)

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +    F  +  ID       P     + L  +A++  +  A ++    +   +    +EP
Sbjct: 3   SYQFVFQEHVGID-------PLSAPINELIEKARECHLDGAENEDRDTLLQFLFSTLVEP 55

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           N+G N    +  +PA ++ALA I   D R  +RFE Y   IEL N  +EL D  EQ HRF
Sbjct: 56  NIGQNKPIAVYHFPATQAALAQISSEDHRVAERFEFYYKGIELANGFNELTDAQEQEHRF 115

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            ++ + ++++    + ID  FL  L   +P ++G+A+G DRL+ML  GA NI+EVI  
Sbjct: 116 NQDNRLREQLGLPQHEIDHRFLGALQAGLPNTAGVALGVDRLIMLALGAENISEVISF 173


>gi|22775674|dbj|BAC15528.1| putative asparaginyl-tRNA synthetase, chloroplast/mitochondrial
           precursor [Oryza sativa Japonica Group]
 gi|50509311|dbj|BAD30675.1| putative asparaginyl-tRNA synthetase, chloroplast/mitochondrial
           precursor [Oryza sativa Japonica Group]
          Length = 584

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/369 (15%), Positives = 105/369 (28%), Gaps = 57/369 (15%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R R          RN +  +  ++F +N F+ + S  +  S       + + T LI 
Sbjct: 233 AHLRPRTNTFGAVARVRNALAYATHKFFQDNGFVWVASPIITASDCEGAGEQFYVTTLIS 292

Query: 69  QDHIR-----------------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                                       KP +L  S + + +    A    ++ F   +R
Sbjct: 293 NSAEGGSLVKDIPSTKDGRVDWSQDFFCKPAFLTVSGQLNGETYATA-LSDVYTFGPTFR 351

Query: 106 NGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                   H  EF M+E   A       M    + ++   +   +               
Sbjct: 352 AENSNTSRHLAEFWMIEPELAFADLNDDMACASSYLQYVVKYVLENCK------------ 399

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI----RVAHDDTWSDIFSR 220
            E +     +     ID     D  ++   HL Y  A +  +    +      W      
Sbjct: 400 -EDMDFFNTWIEKGIIDRLN--DVVEKNFVHLSYSDAIELLVGSKKKFEFPVKWGLDLQS 456

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
                I          I+  YP    A       D +     +L    +       EL+ 
Sbjct: 457 EHERYITEVAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDLLVPRV------GELIG 510

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNI 339
             ++  R +       ++          +L          +G  +GF+RLV   TG +NI
Sbjct: 511 GSQREERLDYLEARLDELNLNKDSY-WWYLDLRRYGSVPHAGFGLGFERLVQFATGMDNI 569

Query: 340 NEVIWTPFS 348
            + I  P  
Sbjct: 570 RDTIPFPRV 578


>gi|153005580|ref|YP_001379905.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152029153|gb|ABS26921.1| asparaginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 434

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/345 (16%), Positives = 107/345 (31%), Gaps = 39/345 (11%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W R    R++  L  R+ ++ ++R++F    F  +D+     S    T     ST  
Sbjct: 120 RHLWLRS--QRQQVILRVRHTVEKAIRDFFDARGFTLVDAPIFTPSACEGT-----STLF 172

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
            +        YL  S +    +  A    K++CF   +R  +     H  EF M+E   A
Sbjct: 173 EVPYFELGKAYLTQSGQLYM-EAAAMALGKVYCFGPTFRAEKSKTRRHLTEFWMVEPEVA 231

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
           +   +  M+     +    + A +K                                 + 
Sbjct: 232 YMDLDGDMELMEQFVSHVVQTALEKHRKELVAVLERDV--------------------SK 271

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           L+N   P   + Y +A     +  H   W D         I      +   ++ RYPA  
Sbjct: 272 LENVKPPFPRITYTEAVDVLQKAGHPMKWGDDIGGDEETVIAKQY--DRPVMVHRYPAEM 329

Query: 246 -SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            +      P DP+             L       +    +R    + ++     +     
Sbjct: 330 KAFYFKKDPTDPKVA------LGCDVLAPEGYGEIIGGGERESSLETLEAAIAHHQLPKE 383

Query: 305 IDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E +L          +G  MG +R V  + G +++ E I     
Sbjct: 384 AFEWYLDLRRYGTVPHAGFGMGVERCVAWICGLHHVRETIPFARM 428


>gi|289669570|ref|ZP_06490645.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 464

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 108/370 (29%), Gaps = 44/370 (11%)

Query: 1   MHQIPSQPWWNRD-FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMSPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDGSGNVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLA 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                 E +         A I+        +Q D        Q +G +      W     
Sbjct: 288 ------ERVDKNAIAKLEAFINAP-----FEQIDYTDAVKLLQNSGKKFDFPVEWGLDLQ 336

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +     I    ++  YP    A       D +             L     E++
Sbjct: 337 TEHERWLTEEH-IGRPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 389

Query: 280 DPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +          +  E Y    DF          +G  +GF+RLV+ V G +
Sbjct: 390 GGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLS 447

Query: 338 NINEVIWTPF 347
           NI + I  P 
Sbjct: 448 NIRDAIPYPR 457


>gi|289663133|ref|ZP_06484714.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 464

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 109/370 (29%), Gaps = 44/370 (11%)

Query: 1   MHQIPSQPWWNRD-FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMSPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDGSGNVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++       ++         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEQFLKYLFRAVLEERGDDLAFLA 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                 E +         A I+        +Q D        Q +G +      W     
Sbjct: 288 ------ERVDKNAIAKLEAFINAP-----FEQIDYTDAVKLLQNSGKKFDFPVEWGLDLQ 336

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +     I    ++  YP    A       D +             L     E++
Sbjct: 337 TEHERWLTEEH-IGRPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 389

Query: 280 DPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +          +  E Y    DF          +G  +GF+RLV+ V G +
Sbjct: 390 GGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLS 447

Query: 338 NINEVIWTPF 347
           NI + I  P 
Sbjct: 448 NIRDAIPYPR 457


>gi|298207133|ref|YP_003715312.1| asparaginyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849767|gb|EAP87635.1| asparaginyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 480

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 55/376 (14%), Positives = 116/376 (30%), Gaps = 42/376 (11%)

Query: 5   PSQPWWNR---DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R       +  R+ +  ++ +YF +N F  +++  +  S    
Sbjct: 109 PKRHSLEKLREQAHLRVRTNTGAAVMRLRSKLSFAVHKYFQDNGFYYVNTPIITGSDAEG 168

Query: 56  ETHI---------RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
              +              E    ++      K   L  S +   +        +++ F  
Sbjct: 169 AGEMFKVTAMDLKNPAKNEDGSINYKEDFFGKETNLTVSGQLEAETFALG-LGQVYTFGP 227

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A       M    + I+       +          N 
Sbjct: 228 TFRAENSNTSRHLAEFWMIEPEVAFCDLAGNMDLAEDFIKYVIGYVLENCDEDLEFLENR 287

Query: 162 FSEPEYITVAEAFA--------RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
             + +        +        ++   +    +   +  D        ++   +   ++ 
Sbjct: 288 LVQEDKSKPQAERSDMLLRDKLKFVLENNFKRVSYTEAIDILKSSKPNKKKKFKYIIEEW 347

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
            +D+ S      +E +    C  IL  YPA   A       D +  +  ++    I    
Sbjct: 348 GADLQSEHERYLVEKH--FKCPVILFDYPANIKAFYMRLNEDGKTVRAMDILFPGI---- 401

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              E++   ++  R +   ++   +      +   +L          SG  +GF+RLV  
Sbjct: 402 --GEIVGGSQREERLDVLKEKMTALDIPEEEL-WWYLDTRKFGTCVHSGFGLGFERLVQF 458

Query: 333 VTGANNINEVIWTPFS 348
            TG  NI +VI  P +
Sbjct: 459 ATGMGNIRDVIPFPRT 474


>gi|218513676|ref|ZP_03510516.1| lysyl-tRNA synthetase protein [Rhizobium etli 8C-3]
          Length = 184

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 97/176 (55%), Positives = 122/176 (69%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW    H  RRPFL+ RN IQ++LR +F    FIE+D+  LQ SPGNE H+ AF+TE
Sbjct: 7   ASPWWTPSVHADRRPFLIGRNAIQAALRGFFAREDFIEVDTAVLQISPGNEAHLHAFATE 66

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            +  D  + P YL TSPEF+CKKLLAAGE++I CFAH +RN E+G LH PEFTMLEWYRA
Sbjct: 67  ALTTDGQKAPFYLHTSPEFACKKLLAAGEQRISCFAHVYRNRERGPLHHPEFTMLEWYRA 126

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
            ESY  LM DC+ I+  AAE        ++   C+PF+ PE ++VAEAF R+A ID
Sbjct: 127 GESYYSLMMDCVRILALAAETVKTDKLGYRGAACDPFAGPERVSVAEAFERHAGID 182


>gi|222480075|ref|YP_002566312.1| aspartyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222452977|gb|ACM57242.1| aspartyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 434

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/352 (16%), Positives = 106/352 (30%), Gaps = 50/352 (14%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +       R               R+ + +++ E+F +  F++I +  +          +
Sbjct: 113 DLSTRLDNRALDLRKPETLAVFTLRSKLMTAMEEWFDDEGFVDIKTPLISKGGAEGGAEL 172

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFT 118
                      +  +  +L  SP+   + L+A+G E ++    A+R  +     H  E  
Sbjct: 173 FPIL-------YYNQDAFLSQSPQLYKQMLMASGYEAVYETGTAFRAEDFATSRHVSEIA 225

Query: 119 MLEWYRAHESYEQLMKDCMNI-IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           M +   A+      + D     +R A     +      ++       PE           
Sbjct: 226 MFDVELAYIDDHHDVMDVQEKSLRHALRAVAENAERELDLLDVDLDVPED---------- 275

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
                    D P       L L   + G              ++L +  E     +    
Sbjct: 276 ---------DFPRITFDEALDLLETEFGHFPDDPTDLDTKGEKLLGQHFEEQG--HPAFF 324

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  YP  +         D   +++F+L     EL +      D        E+E  E   
Sbjct: 325 VVGYPDEKFYYMQDVEGDDIASRKFDLIYKGQELSSGGQREHDADRMVEVMEEEGVETAN 384

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                    E ++  L+   P   G  +G DRLV  V   +NI E I  P  
Sbjct: 385 F--------EFYIEALSFGTPPHGGYGLGIDRLVQKVADLDNIKEAIMFPRD 428


>gi|194366365|ref|YP_002028975.1| asparaginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194349169|gb|ACF52292.1| asparaginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 464

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 113/371 (30%), Gaps = 46/371 (12%)

Query: 1   MHQIPSQPWWNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F EN F  I +  +  S  
Sbjct: 109 IQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHENGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDAQGGIDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEEFLKYLFRAVLNERGDDLAFIA 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIF 218
               +   IT  E F               ++ D        Q++G +      W  D+ 
Sbjct: 288 ERVDK-NAITKLEDF----------INAPFERIDYTDAVSLLQKSGKKFDFPVEWGLDLQ 336

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
           +       E ++G     ++  YP    A       D +             L     E+
Sbjct: 337 TEHERWLTEEHVG--RPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEI 388

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDE--DFLACLTEMPQSSGIAMGFDRLVMLVTGA 336
           +   ++  R +       +   +        DF          +G  +GF+RLV+ V G 
Sbjct: 389 IGGSQREERLDVLDARMAQFGLDREHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGL 446

Query: 337 NNINEVIWTPF 347
           +NI + I  P 
Sbjct: 447 SNIRDAIPYPR 457


>gi|302500634|ref|XP_003012310.1| aspartate-tRNA ligase, putative [Arthroderma benhamiae CBS 112371]
 gi|291175868|gb|EFE31670.1| aspartate-tRNA ligase, putative [Arthroderma benhamiae CBS 112371]
          Length = 947

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 120/331 (36%), Gaps = 27/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I +  R       FIEI S  LQ +   E+    F       ++  +P +
Sbjct: 277 SQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQ-AAATESGASVFGV-----NYFGRPAF 330

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 331 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEALEV 390

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +  +      + +  +          E +   +     +  D    L++    D   
Sbjct: 391 LDSVLKSIFKTIYEKYRLEIEVIKHHFPSEDLVWLDETPIISFADGVKMLNDSGWVD--- 447

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                 + G +++  + +       L E ++     +   ILD++PA         +P D
Sbjct: 448 ------ENGNKLSETEDFGTRDEIRLGELVKEKFHTD-YYILDKFPATARPFYAMPHPDD 500

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            RFT  F+++    E+ +    +  P     R       ++   + +    E+++     
Sbjct: 501 ERFTLSFDIFVRGQEIVSGGQRIHHPDLLDKR------MREVGIDPSTM--EEYMEGFKW 552

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +RL+ML+    NI      
Sbjct: 553 GAPPHAGAGIGLERLLMLILKLGNIRLGSLF 583


>gi|326334559|ref|ZP_08200770.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325693328|gb|EGD35256.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 474

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 121/376 (32%), Gaps = 42/376 (11%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +   + H R R       +  R+ +  ++  Y  ++ F  +++  +  S    
Sbjct: 103 PKRHSLEFLRENAHLRVRTNVFGAIMRVRSTLAYAIHRYLQDHGFFYVNTPIITGSDAEG 162

Query: 56  ETHI---------RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
              +             T     D+      +   L  S +    +  A    KI+ F  
Sbjct: 163 AGEMFRVTTLDAKNPPLTTEGEVDYKKDFFGRETNLTVSGQL-EGETFAMSLGKIYTFGP 221

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A       M    + I+       +            
Sbjct: 222 TFRAENSNTSRHLAEFWMIEPEMAFYDLIDNMNLAEDFIKEVLRYTLEVRRDDIEFLNQR 281

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQP--------DRHLLYLQAQQAGIRVAHDDT 213
           F E E     +  +  + I+    + + D          +        ++   +   D+ 
Sbjct: 282 FLEEEKTKPQQERSEMSLIEKLEFVIHNDFKRVSYTDAVEILKNCNYNKKKKFQYLIDEW 341

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
             D+ S      +E + G  C  IL  YPA   A       D +  +  ++    I    
Sbjct: 342 GVDLQSEHERYLVEKHFG--CPVILYDYPAKIKAFYMRLNDDGKTVRAMDILFPGIGEIV 399

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPID-EDFLACLTEMPQSSGIAMGFDRLVML 332
              +  +  E   +   ++  K+   +  + +D   F   +      SG  +GF+RLV+ 
Sbjct: 400 GGSQREERYEVLKKKIADLGMKEA--DLWWYLDLRKFGTAV-----HSGFGLGFERLVLF 452

Query: 333 VTGANNINEVIWTPFS 348
            TG +NI +VI  P +
Sbjct: 453 TTGMSNIRDVIPYPRT 468


>gi|302187869|ref|ZP_07264542.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 87

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGF 326
             E+ NA  EL D  +Q  RF+ ++ +K    +E    D DF+  L   MP ++G  +G 
Sbjct: 2   GREIANAYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGI 61

Query: 327 DRLVMLVTGANNINEVIWTPFSQSN 351
           DRLVML+T + +I +VI  P  +  
Sbjct: 62  DRLVMLLTDSPSIRDVILFPHMRPQ 86


>gi|109108077|ref|XP_001094498.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           [Macaca mulatta]
          Length = 477

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 105/349 (30%), Gaps = 38/349 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H+R R       L  R+   +++  +F ++ F+ I +  +  +       +  F  E   
Sbjct: 144 HFRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGEL--FQLEPSG 201

Query: 69  ------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                 ++    P +L  S +    ++++    ++F F   +R        H  EF M+E
Sbjct: 202 KLKVPEENFFNVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVE 260

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  +  Q +   +  +  A  +            C+ F  P      E   +     
Sbjct: 261 AEISFVNSLQDLMQVIEELFKATAMMVLSNCPEDVELCHKFIAPGQKDRLEHMLK----- 315

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                +N             +QA         W         + +  + G      +  Y
Sbjct: 316 -----NNFLIISYTEAVEILKQASQNFTFTPEWGVNLQTEHEKYLVKHCGNIPV-FIINY 369

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR--FEKEMQEKKKIY 299
           P            D        +      L     EL     +  R  F +E   +  + 
Sbjct: 370 PLAIKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGGLREERYHFLEERLARSGLT 425

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                + + +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 426 E----VYQWYLDLRRFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 470


>gi|85096905|ref|XP_960347.1| hypothetical protein NCU07082 [Neurospora crassa OR74A]
 gi|28921835|gb|EAA31111.1| hypothetical protein NCU07082 [Neurospora crassa OR74A]
          Length = 915

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 52/331 (15%), Positives = 106/331 (32%), Gaps = 27/331 (8%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
                  I S  R Y  +  F+EI +  LQ +   E+    F       ++  +  +L  
Sbjct: 255 IFRINAGICSIFRRYLEDKGFMEIHTPKLQPAA-TESGAEVFKV-----NYFGRTAFLAQ 308

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+ + +  ++A   ++F     +R  +     H  E+T ++   A E         ++ 
Sbjct: 309 SPQLAKQMSISADFGRVFEIGPVFRAEDSNTHRHLTEYTGMDLEMAIEQDYHEAMHIIDG 368

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +           +  +          E +            D    L++    D      
Sbjct: 369 LMKEIFKGIYGKYRKEIEIIKTRFPHEDLVWLPETPIIPFKDAIKLLNDSGWTD------ 422

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRF 258
                G      +  S      L + I+     +   I+D++P+       ++ P D RF
Sbjct: 423 ---DHGRPALETEDLSTRAEIQLGQVIKEKYKTD-YYIIDKFPSSVRPFYTHLDPEDDRF 478

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           T  F+++    E+      +  P     R       KK          +++L      + 
Sbjct: 479 TNSFDIFLRGQEITTGGQRIHRPHLLEER------MKKAGIEPLGM--QEYLQGFEYGVL 530

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +G  +G +R+V L+    +I      P  
Sbjct: 531 PHAGCGIGLERIVFLLLNLGDIRNASLIPRD 561


>gi|327296545|ref|XP_003232967.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326465278|gb|EGD90731.1| lysyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 947

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 120/331 (36%), Gaps = 27/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I +  R       FIEI S  LQ +   E+    F       ++  +P +
Sbjct: 277 SQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQ-AAATESGASVFGV-----NYFGRPAF 330

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 331 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEALEV 390

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +  +      + +  +          E +   +     +  D    L++    D   
Sbjct: 391 LDSVLKSIFKTIYEKYRLEIEVIKHHFPSEDLVWLDETPIISFADGVKMLNDSGWVD--- 447

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                 + G +++  + +       L E ++     +   ILD++PA         +P D
Sbjct: 448 ------ENGNKLSETEDFGTRDEIRLGELVKEKFHTD-YYILDKFPATARPFYAMPHPDD 500

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            RFT  F+++    E+ +    +  P     R       ++   + +    E+++     
Sbjct: 501 ERFTLSFDIFVRGQEIVSGGQRIHHPDLLDKR------MREVGIDPSTM--EEYMEGFKW 552

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +RL+ML+    NI      
Sbjct: 553 GAPPHAGAGIGLERLLMLILKLGNIRLGSLF 583


>gi|300857330|ref|YP_003782314.1| asparaginyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437445|gb|ADK17212.1| asparaginyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 463

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 110/358 (30%), Gaps = 45/358 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+  ++  +  S       +  F    +
Sbjct: 122 AHLRSRSNTFSAVFRVRSIAAYAVHKFFQERGFVYANTPLITGSDCEGAGEM--FKVTSM 179

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
             +             K  +     L  S + S  + +A     ++ F   +R  +    
Sbjct: 180 DLNNIPKKEDGSVDYSKDFFGKETNLTVSGQLSA-ETMALAFRNVYTFGPTFRAEDSNTA 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +  M     +++                    F+     T+ 
Sbjct: 239 RHAAEFWMIEPEMAFAELKDYMDVAEELVKYVINYV----LENAPEEMAFFNSFIDKTLF 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
                 AN + G                  +++G    +   W           +   + 
Sbjct: 295 SRLDNVANSEFGRITYTE-------AVDILKKSGASFEYPVEWGIDLQTEHERYLTEKVF 347

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    +       E++   ++  R++  
Sbjct: 348 KKP-IFVTDYPKAIKAFYMRENEDGKTVAAADLLVPGV------GEIIGGSQREERYKVL 400

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +  +++          +L        + SG  +GF+R++M +TG +NI +VI  P +
Sbjct: 401 EKRIEELGLNKKDY-WWYLELRKYGETKHSGFGLGFERILMYITGMSNIRDVIPFPRT 457


>gi|188992094|ref|YP_001904104.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167733854|emb|CAP52060.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. campestris]
          Length = 464

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 108/370 (29%), Gaps = 44/370 (11%)

Query: 1   MHQIPSQPWWNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMSPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRTAQGEVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLA 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                 E +         A I+        +Q D        Q +G +      W     
Sbjct: 288 ------ERVDKNAISKLEAFINAP-----FEQIDYTDAVKLLQNSGKKFDFPVEWGLDLQ 336

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +     I    ++  YP    A       D +             L     E++
Sbjct: 337 TEHERWLTEEH-IGRPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 389

Query: 280 DPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +          +  E Y    DF          +G  +GF+RLV+ V G +
Sbjct: 390 GGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLS 447

Query: 338 NINEVIWTPF 347
           NI + I  P 
Sbjct: 448 NIRDAIPYPR 457


>gi|217959728|ref|YP_002338280.1| aspartyl-tRNA synthetase [Bacillus cereus AH187]
 gi|217063033|gb|ACJ77283.1| aspartyl-tRNA synthetase [Bacillus cereus AH187]
          Length = 432

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 106/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++    S  E+  EN F  I +  +    G E     F        + +
Sbjct: 124 RHERIAAIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVEIGFINDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   ++++   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLQYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 TLLQ-AQEILKSKYRKESPIGDLDTEGEKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNNENPSITDSFDLLYKGLEITSGAQRIHNYEMLLASF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERVVCKLLELTNVREASAFPRD 426


>gi|311087773|gb|ADP67852.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 466

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/373 (15%), Positives = 109/373 (29%), Gaps = 49/373 (13%)

Query: 3   QIPSQPW---WNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQY-S 52
            I S+     + R+  H R R  L       RN I  SL  +F + ++  + +  +   +
Sbjct: 110 PISSKKHSTEYLREVAHLRSRTNLIGAIARIRNYILHSLHHFFYKEKYYWVPTPIITSLN 169

Query: 53  PGNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
                 +   ST                 +D   K  +L  S + + +    +   K++ 
Sbjct: 170 TEGAGEMFRVSTLDMENIPKNLDSSVDFKKDFFGKESFLTVSGQLNLETYACS-LSKVYT 228

Query: 100 FAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN 158
           F   +R        H  EF MLE   A      +      +++   +   +K  +    +
Sbjct: 229 FGPTFRAENSNTGRHLAEFWMLEVESAFTDLNDISDFAECMLKYVCKSLLKKCIT----D 284

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N         + +   ++  +D         + D   +      + I+  +        
Sbjct: 285 INFLENYTNSNIVDRLEKFLLVDFV-------RIDYVEVINILLDSKIKFNNSVFLGIDL 337

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDE 277
           S      +  N       +   YP    A                 L     EL      
Sbjct: 338 SSEHERFLVENYFKIPVIVK-NYPKELKAFYMRLNNDKKTVAAIDILVPNVGELIGGSQR 396

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTG 335
                    R  +   +K+         D  +   L        SG  MGF+RL+   TG
Sbjct: 397 EERIAILDERLLELGLKKE---------DYWWYRDLRRYGTVPHSGFGMGFERLISYFTG 447

Query: 336 ANNINEVIWTPFS 348
             NI ++I  P +
Sbjct: 448 ITNIRDLIPFPRT 460


>gi|219681718|ref|YP_002468104.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682273|ref|YP_002468657.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471416|ref|ZP_05635415.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219622006|gb|ACL30162.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624561|gb|ACL30716.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086097|gb|ADP66179.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086671|gb|ADP66752.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087255|gb|ADP67335.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 466

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/373 (15%), Positives = 109/373 (29%), Gaps = 49/373 (13%)

Query: 3   QIPSQPW---WNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQY-S 52
            I S+     + R+  H R R  L       RN I  SL  +F + ++  + +  +   +
Sbjct: 110 PISSKKHSTEYLREVAHLRSRTNLIGAIARIRNYILHSLHHFFYKEKYYWVPTPIITSLN 169

Query: 53  PGNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
                 +   ST                 +D   K  +L  S + + +    +   K++ 
Sbjct: 170 TEGAGEMFRVSTLDMENIPKNLDSSVDFKKDFFGKESFLTVSGQLNLETYACS-LSKVYT 228

Query: 100 FAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN 158
           F   +R        H  EF MLE   A      +      +++   +   +K  +    +
Sbjct: 229 FGPTFRAENSNTGRHLAEFWMLEVESAFTDLNDISDFAECMLKYVCKSLLKKCIT----D 284

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N         + +   ++  +D         + D   +      + I+  +        
Sbjct: 285 INFLENYTNSNIVDRLEKFLLVDFV-------RIDYVEVINILLDSKIKFNNSVFLGIDL 337

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDE 277
           S      +  N       +   YP    A                 L     EL      
Sbjct: 338 SSEHERFLVENYFKIPVIVK-NYPKELKAFYMRLNNDKKTVAAIDILVPNVGELIGGSQR 396

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTG 335
                    R  +   +K+         D  +   L        SG  MGF+RL+   TG
Sbjct: 397 EERIAILDERLLELGLKKE---------DYWWYRDLRRYGTVPHSGFGMGFERLISYFTG 447

Query: 336 ANNINEVIWTPFS 348
             NI ++I  P +
Sbjct: 448 ITNIRDLIPFPRT 460


>gi|15616965|ref|NP_240178.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134959|sp|P57441|SYN_BUCAI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|25293055|pir||H84971 asparagine-tRNA ligase (EC 6.1.1.22) [imported] - Buchnera sp.
           (strain APS)
 gi|10039030|dbj|BAB13064.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 466

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/373 (15%), Positives = 109/373 (29%), Gaps = 49/373 (13%)

Query: 3   QIPSQPW---WNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQY-S 52
            I S+     + R+  H R R  L       RN I  SL  +F + ++  + +  +   +
Sbjct: 110 PISSKKHSTEYLREVAHLRSRTNLIGAIARIRNYILHSLHHFFYKEKYYWVPTPIITSLN 169

Query: 53  PGNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
                 +   ST                 +D   K  +L  S + + +    +   K++ 
Sbjct: 170 TEGAGEMFRVSTLDMENIPKNLDSSVDFKKDFFGKESFLTVSGQLNLETYACS-LSKVYT 228

Query: 100 FAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN 158
           F   +R        H  EF MLE   A      +      +++   +   +K  +    +
Sbjct: 229 FGPTFRAENSNTGRHLAEFWMLEVESAFTDLNDISDFAECMLKYVCKSLLKKCIT----D 284

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            N         + +   ++  +D         + D   +      + I+  +        
Sbjct: 285 INFLENYTNSNIVDRLEKFLLVDFV-------RIDYVEVINILLDSKIKFNNSVFLGIDL 337

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDE 277
           S      +  N       +   YP    A                 L     EL      
Sbjct: 338 SSEHERFLVENYFKIPVIVK-NYPKELKAFYMRLNNDKKTVAAIDILVPNVGELIGGSQR 396

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTG 335
                    R  +   +K+         D  +   L        SG  MGF+RL+   TG
Sbjct: 397 EERIAILDERLLELGLKKE---------DYWWYRDLRRYGTVPHSGFGMGFERLISYFTG 447

Query: 336 ANNINEVIWTPFS 348
             NI ++I  P +
Sbjct: 448 ITNIRDLIPFPRT 460


>gi|221508686|gb|EEE34255.1| asparaginyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 676

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/383 (14%), Positives = 107/383 (27%), Gaps = 67/383 (17%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       +  R+ +  +   +F +  F+ I +  +  S       +   ST L 
Sbjct: 305 AHLRPRSYLIGAVMRVRSNLAMATHRFFQDRGFLYIHTPIVTASDCEGAGEMFQVSTLLP 364

Query: 68  -----------------------------------------IQDHIRKPLYLQTSPEFSC 86
                                                     +D   +P +L  S + + 
Sbjct: 365 PPPPETRENEKKTDGAAPKDAAAAAAEPLIPLKKDKKGVDYSRDFFGRPAFLTVSGQLAV 424

Query: 87  KKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
           +    +    ++ F   +R        H  EF M+E   A  + E  M      ++   +
Sbjct: 425 EPYCCS-LSDVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFATLEDNMVVAEAYVKFCVQ 483

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                       +   F +       E        ++             +  L+A++  
Sbjct: 484 WV----LDNCRADIEWFQK-----NQEEGLIARLENILAEPFARVSYTEAIEVLKAEEPK 534

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
            +      W           +  N+      I+  YP    A       D +  +  ++ 
Sbjct: 535 AQFKEKVEWGMDMGSEHERYLTENVYKKP-CIVYNYPKDIKAFYMKLNEDGKTVRAMDVL 593

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
              I       +  D    R R    +  K     +  P    ++          +G  +
Sbjct: 594 VPKIGELVGGSQREDD---RDRLAAMIAAK---DLDPKPY-WWYMELREYGTIPHAGFGL 646

Query: 325 GFDRLVMLVTGANNINEVIWTPF 347
           GF+RLVMLVTG  NI + I  P 
Sbjct: 647 GFERLVMLVTGIENIRDTIPYPR 669


>gi|237832839|ref|XP_002365717.1| asparaginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211963381|gb|EEA98576.1| asparaginyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 676

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/383 (14%), Positives = 107/383 (27%), Gaps = 67/383 (17%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       +  R+ +  +   +F +  F+ I +  +  S       +   ST L 
Sbjct: 305 AHLRPRSYLIGAVMRVRSNLAMATHRFFQDRGFLYIHTPIVTASDCEGAGEMFQVSTLLP 364

Query: 68  -----------------------------------------IQDHIRKPLYLQTSPEFSC 86
                                                     +D   +P +L  S + + 
Sbjct: 365 PPPPETRENEKKTDGAAPKDAAAAAAEPLIPLTKDKKGVDYSRDFFGRPAFLTVSGQLAV 424

Query: 87  KKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
           +    +    ++ F   +R        H  EF M+E   A  + E  M      ++   +
Sbjct: 425 EPYCCS-LSDVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFATLEDNMVVAEAYVKFCVQ 483

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                       +   F +       E        ++             +  L+A++  
Sbjct: 484 WV----LDNCRADIEWFQK-----NQEEGLIARLENILAEPFARVSYTEAIEVLKAEEPK 534

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
            +      W           +  N+      I+  YP    A       D +  +  ++ 
Sbjct: 535 AQFKEKVEWGMDMGSEHERYLTENVYKKP-CIVYNYPKDIKAFYMKLNEDGKTVRAMDVL 593

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
              I       +  D    R R    +  K     +  P    ++          +G  +
Sbjct: 594 VPKIGELVGGSQREDD---RDRLAAMIAAK---DLDPKPY-WWYMELREYGTIPHAGFGL 646

Query: 325 GFDRLVMLVTGANNINEVIWTPF 347
           GF+RLVMLVTG  NI + I  P 
Sbjct: 647 GFERLVMLVTGIENIRDTIPYPR 669


>gi|221488174|gb|EEE26388.1| asparaginyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 676

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/383 (14%), Positives = 107/383 (27%), Gaps = 67/383 (17%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       +  R+ +  +   +F +  F+ I +  +  S       +   ST L 
Sbjct: 305 AHLRPRSYLIGAVMRVRSNLAMATHRFFQDRGFLYIHTPIVTASDCEGAGEMFQVSTLLP 364

Query: 68  -----------------------------------------IQDHIRKPLYLQTSPEFSC 86
                                                     +D   +P +L  S + + 
Sbjct: 365 PPPPETRENEKKTDGAAPKDAAAAAAEPLIPLTKDKKGVDYSRDFFGRPAFLTVSGQLAV 424

Query: 87  KKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
           +    +    ++ F   +R        H  EF M+E   A  + E  M      ++   +
Sbjct: 425 EPYCCS-LSDVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFATLEDNMVVAEAYVKFCVQ 483

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                       +   F +       E        ++             +  L+A++  
Sbjct: 484 WV----LDNCRADIEWFQK-----NQEEGLIARLENILAEPFARVSYTEAIDVLKAEEPK 534

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
            +      W           +  N+      I+  YP    A       D +  +  ++ 
Sbjct: 535 AQFKEKVEWGMDMGSEHERYLTENVYKKP-CIVYNYPKDIKAFYMKLNEDGKTVRAMDVL 593

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
              I       +  D    R R    +  K     +  P    ++          +G  +
Sbjct: 594 VPKIGELVGGSQREDD---RDRLAAMIAAK---DLDPKPY-WWYMELREYGTIPHAGFGL 646

Query: 325 GFDRLVMLVTGANNINEVIWTPF 347
           GF+RLVMLVTG  NI + I  P 
Sbjct: 647 GFERLVMLVTGIENIRDTIPYPR 669


>gi|332879103|ref|ZP_08446804.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332682903|gb|EGJ55799.1| asparagine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 476

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 70/380 (18%), Positives = 126/380 (33%), Gaps = 50/380 (13%)

Query: 5   PSQP---WWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +   + H R R       +  R+ +  ++ +YF +N F  +++  +  S    
Sbjct: 105 PKKHSLEFLRENAHLRVRSNTFSAVMRVRSTLAYAIHKYFQDNGFFYVNTPIITGSDAEG 164

Query: 56  ETHI---------RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
              +             TE    D+      +   L  S +    +  A    KI+ F  
Sbjct: 165 AGEMFRVTTLDAKNPPLTEDGKVDYKKDFFGRETNLTVSGQL-EGETFAMALGKIYTFGP 223

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A       M    + I+   +   +            
Sbjct: 224 TFRAENSNTSRHLAEFWMIEPEMAFFDLIDNMNLAEDFIKYVLKYTLEVRRDDLEFLNKR 283

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQP--------DRHLLYLQAQQAGIRVAHDDT 213
           F E E     +  +  + I+    + N D          D        ++   +   D+ 
Sbjct: 284 FLEEEKGKPQQERSSMSLIEKLEFVINNDFKRVSYTEAIDILKNCNHNKKKKFQYLVDEW 343

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
             D+ S      +E +    C  IL  YPA   A       D +  +  ++    I    
Sbjct: 344 GIDLQSEHERYLVEKH--FECPVILYDYPANIKAFYMRLNDDGKTVRAMDILFPGI---- 397

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE----DFLACLT-EMPQSSGIAMGFDR 328
              E++   ++  R+E  + +KK        +DE     +L          SG  +GF+R
Sbjct: 398 --GEIVGGSQREERYE--VLKKKIADL---NMDEATLWWYLDLRKFGTAVHSGFGLGFER 450

Query: 329 LVMLVTGANNINEVIWTPFS 348
           LV+  TG  NI +VI  P +
Sbjct: 451 LVLFATGMTNIRDVIPYPRT 470


>gi|78047215|ref|YP_363390.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|123771404|sp|Q3BV23|SYN_XANC5 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|78035645|emb|CAJ23336.1| asparaginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 464

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 107/370 (28%), Gaps = 44/370 (11%)

Query: 1   MHQIPSQPWWNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDASGNVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLA 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
               +   IT  E                 +Q D        Q +G +      W     
Sbjct: 288 ERVDK-NAITKLE----------AFINAPFEQIDYTEAVKLLQNSGKKFDFPVEWGLDLQ 336

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +     I    ++  YP    A       D +             L     E++
Sbjct: 337 TEHERWLTEEH-IGRPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 389

Query: 280 DPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +          +  E Y    DF          +G  +GF+RLV+ V G +
Sbjct: 390 GGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLS 447

Query: 338 NINEVIWTPF 347
           NI + I  P 
Sbjct: 448 NIRDAIPYPR 457


>gi|326473276|gb|EGD97285.1| aspartyl-tRNA synthetase, cytoplasmic [Trichophyton tonsurans CBS
           112818]
          Length = 947

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 120/331 (36%), Gaps = 27/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I +  R       FIEI S  LQ +   E+    F       ++  +P +
Sbjct: 277 SQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQ-AAATESGASVFGV-----NYFGRPAF 330

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 331 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEALEV 390

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +  +      + +  +          E +   +     +  D    L++    D   
Sbjct: 391 LDSVLKSIFKTIYEKYRLEIEVIKHHFPSEDLVWLDETPIISFADGVKMLNDSGWVD--- 447

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                 + G +++  + +       L E ++     +   ILD++PA         +P D
Sbjct: 448 ------ENGNKLSETEDFGTRDEIRLGELVKEKFHTD-YYILDKFPATARPFYAMPHPDD 500

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            RFT  F+++    E+ +    +  P     R       ++   + +    E+++     
Sbjct: 501 ERFTLSFDIFVRGQEIVSGGQRIHHPDLLDKR------MREVGIDPSTM--EEYMEGFKW 552

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +RL+ML+    NI      
Sbjct: 553 GAPPHAGAGIGLERLLMLILKLGNIRLGSLF 583


>gi|71899836|ref|ZP_00681986.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Ann-1]
 gi|71730427|gb|EAO32508.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Ann-1]
          Length = 466

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 108/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F EN +  I +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLH 113
                          D   K  +L  S + + +    A   K++ F+  +R        H
Sbjct: 185 VNLPRTETGGIDFSHDFFGKETFLTVSGQLNVEAYALA-LSKVYTFSPTFRAENSHTPRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A     +  +     ++   +   ++             E   I+  E 
Sbjct: 244 LAEFWMIEPEIAFADLAEDARVAEQFLKFLFKTVLEER-DDDLAFITERVEKTTISKLE- 301

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                    G      ++ +        +++G +      W           +     I 
Sbjct: 302 ---------GFINSPFERIEYTDAIKLLERSGKKFDFPVEWGLDLQTEHERWLTEKH-IG 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              ++  YP    A       D +             L     E++   ++  R E  ++
Sbjct: 352 RPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEMLDI 405

Query: 293 QEKKKIYNETYP-IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  +   +  +     DF          +G  +GF+RLV+ V G +NI + I  P 
Sbjct: 406 RMAQFGLDPAHYQWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLSNIRDAIPYPR 459


>gi|148654413|ref|YP_001274618.1| asparaginyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|172048101|sp|A5UPW5|SYN_ROSS1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148566523|gb|ABQ88668.1| asparaginyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 440

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/348 (15%), Positives = 105/348 (30%), Gaps = 38/348 (10%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFST 64
            +  W R    ++   L  R  I ++ +E+  +  F+  D+  L   +    T++  F+T
Sbjct: 120 HRHLWIRSS--KQHALLRIRAEIIAAAQEWLNDQGFVRFDTPILTPCAAEGTTNL--FAT 175

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
                       YL  + +   +  + +   K++CF   +R  +     H  EF M+E  
Sbjct: 176 PYFDLG----TAYLGQTGQLYVEAGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPE 230

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A   +E  +      +    +   ++               E          Y      
Sbjct: 231 VAFALHEDNLALQERFVSAIVQRVLERRADDLATLERDTKPLERCVPPFPRITY------ 284

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                    D  L  +  + A +       W +         I      +    ++R+P+
Sbjct: 285 ---------DEALKLIAERHADVEGCTPLEWGEDLGAPHETLIAS--LFDRPVFVERFPS 333

Query: 244 PE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
              +      P  P      +L A     E+      + DP     R  +       + +
Sbjct: 334 AIKAFYMEPDPQRPEVALCADLLAPEGYGEIIGGSQRIHDPALLERRIREYGL---NVDD 390

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + ID             SG  MG +R    + G ++I E I  P  
Sbjct: 391 YQWYIDLR----RYGSVPHSGFGMGIERATAWIAGTHHIRETIPFPRM 434


>gi|303247151|ref|ZP_07333426.1| asparaginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302491577|gb|EFL51462.1| asparaginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 462

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/353 (16%), Positives = 99/353 (28%), Gaps = 43/353 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       L  R+ +  ++  +F    F  + +  +  S       +  F    +
Sbjct: 123 AHLRPRTNKYGAMLRLRSALGQAVHAFFAARGFAWVQTPIITGSDCEGAGEM--FRVTAL 180

Query: 68  I-------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  YL  S + S + L  A   K++ F   +R        H
Sbjct: 181 SDAESCLPPGERASRDFFAKDAYLTVSGQLSAEPLALA-LGKVYTFGPTFRAEHSDTSRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A    E  M     +++    VA         +           T+   
Sbjct: 240 AAEFWMLEPEMAFADLEDDMDLGEALLKHLVGVAVHDCAEDFALFAKYVDPSLPDTLGAI 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R              +           +AG        +           +       
Sbjct: 300 LER-----------PFVRLPYAEAVEILSKAGETFQFPVGFGCDLQSEHERYLTERH-FK 347

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +L  YP    A       D +     ++    I       E++    +  R +    
Sbjct: 348 RPVVLYDYPKEIKAFYMRQNDDGKTVAAMDVLVPGI------GEIIGGSAREERLDVLTG 401

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             +++          +L          +G  +GF+RLVMLVTG  NI +V   
Sbjct: 402 RIRELSLP-MENYWWYLDTRRFGTVPHAGFGLGFERLVMLVTGIGNIRDVTAF 453


>gi|317132068|ref|YP_004091382.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315470047|gb|ADU26651.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 437

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/349 (12%), Positives = 102/349 (29%), Gaps = 44/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF 62
           +  +P      + R+R     +  +     ++  +N F ++ +  +  +      +I   
Sbjct: 123 LDHRPLTL--RNPRQRAIFKIQEAVADGFADFMRQNGFTQMHTPKIVSAGAEGGANI--- 177

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTMLE 121
                  D+     +L  SP+F  +  +    E++F  A  +R        H  E+  L+
Sbjct: 178 ----FHLDYFDTKAFLNQSPQFYKQM-MVGVFERVFEIAPVFRAEKHHTSRHLNEYVGLD 232

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
           +     S  + +      +        Q     +                          
Sbjct: 233 FEMGFISGMEDVMAMETAMLRHLFAYVQAHCLEELAMWKVDVP----------------- 275

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               +D              ++ G +        +    + +         +    +  +
Sbjct: 276 ---VVDKIPAFTFMQAREIIEKLGRK--PGKWDLEPDDEVALCDHVKRECDSDLVFITHF 330

Query: 242 PAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           PA +     +    D RF   F+L    +E+      + D  EQ        + ++   +
Sbjct: 331 PAAKRPFYAMDDPTDERFALSFDLLFRGLEITTGGQRIHDYNEQVD------KMRRMGLD 384

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L      +P   G+ +G +RLVM + G  N+ E    P  
Sbjct: 385 PADF--ASYLMAHKYGLPPHGGLGIGLERLVMKLMGLKNVREASLFPRD 431


>gi|292558064|gb|ADE31065.1| Asparaginyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 367

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 64/348 (18%), Positives = 119/348 (34%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++      RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 44  MDNRHLWLRSR--KQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDS------ 95

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  +  YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 96  TELFETDYFGQLAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 154

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +               +   +AE F R A  D 
Sbjct: 155 EYSFLSHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRY-IAEPFKRVAYDDA 213

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            T L    + D+   Y                 D F       I    G+   T +  YP
Sbjct: 214 ITLLQ-EHEADKDTDYE-----------HIEHGDDFGSPHETWISNYFGV--PTFVVNYP 259

Query: 243 AP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A  ++      P +P      +L            E++    +   ++  + +  ++  +
Sbjct: 260 ASFKAFYMKPVPGNPERVLCADL-----LAPEGYGEIIGGSMREDNYDALVAKMDELGMD 314

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L           G  +G +R+V  V G  +I E I  P  
Sbjct: 315 KSEY-EFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRM 361


>gi|147677755|ref|YP_001211970.1| asparaginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189083275|sp|A5D2C2|SYN_PELTS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|146273852|dbj|BAF59601.1| aspartyl/asparaginyl-tRNA synthetases [Pelotomaculum
           thermopropionicum SI]
          Length = 430

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 108/345 (31%), Gaps = 41/345 (11%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W R    R+   L  R+ ++   R++F E  F+  D+  +  +    T      T L
Sbjct: 118 RHLWIRT--PRQSAILRIRSELEKGCRDFFEERDFVLADAPIITPTACEGT------TNL 169

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
              D+  +  YL  S +    +  A    +++CF   +R  +     H  EF M+E   A
Sbjct: 170 FEIDYHGEKAYLSQSGQLY-NEATAMALGRVYCFGPTFRAEKSKTRRHLMEFWMVEAEAA 228

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
              +E  ++    ++        +       +          +T       Y +      
Sbjct: 229 FFDFEDNIRLQEELVSYLVRRVLENNKKELELLRRDTGRLTGVTPPFPRMSYTD------ 282

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                              G+    D  W D F       I  + G+     + R+P   
Sbjct: 283 -----------AVDFLNSKGV----DFKWGDDFGAPHETMISEHFGL--PVFIHRFPVDI 325

Query: 246 -SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            +      P +P      +L      L       +    QR    + ++++   +     
Sbjct: 326 KAFYMKPDPENPDVVLGADL------LAPEGYGEIIGGGQRIDELELLKKRLVQHKLPEE 379

Query: 305 IDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E +L          SG  +G +RL+  + G  +I E I  P  
Sbjct: 380 AFEWYLDLRRYGSVPHSGFGLGLERLLAWICGIEHIREAIPFPRM 424


>gi|326477742|gb|EGE01752.1| aspartyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 947

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 120/331 (36%), Gaps = 27/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I +  R       FIEI S  LQ +   E+    F       ++  +P +
Sbjct: 277 SQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQ-AAATESGASVFGV-----NYFGRPAF 330

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 331 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEALEV 390

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +  +      + +  +          E +   +     +  D    L++    D   
Sbjct: 391 LDSVLKSIFKTIYEKYRLEIEVIKHHFPSEDLVWLDETPIISFADGVKMLNDSGWVD--- 447

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                 + G +++  + +       L E ++     +   ILD++PA         +P D
Sbjct: 448 ------ENGNKLSETEDFGTRDEIRLGELVKEKFHTD-YYILDKFPATARPFYAMPHPDD 500

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            RFT  F+++    E+ +    +  P     R       ++   + +    E+++     
Sbjct: 501 ERFTLSFDIFVRGQEIVSGGQRIHHPDLLDKR------MREVGIDPSTM--EEYMEGFKW 552

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +RL+ML+    NI      
Sbjct: 553 GAPPHAGAGIGLERLLMLILKLGNIRLGSLF 583


>gi|266622513|ref|ZP_06115448.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288865768|gb|EFC98066.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 470

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 104/334 (31%), Gaps = 40/334 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           R     +  I    R++     F EI +   +       ++       +   D+  K   
Sbjct: 167 RAKFRIQEGIVRGFRDFLHSQGFTEIRTPKIVARGAEGGSN-------VFRLDYFNKKAE 219

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+F  K+ +    +++F  A  +R  +     H  E+T L++   +    + +   
Sbjct: 220 LGQSPQFY-KQTMVGVYDRVFEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDGFEDVMAM 278

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +         + +                   E   R   + L      P    +  
Sbjct: 279 ETSMLQYVMKLLSEEY-------------------EKELRMLKVTLPDVARIPAVTFKRA 319

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP-AD 255
             L +++    + +          ++    +     +    +  YP+ +     +    D
Sbjct: 320 KELVSEKYSRPIRNPYDLEPEEEYLIGRYFKEEYDSD-FVFVTHYPSKKRPFYAMDDPHD 378

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P++T  F+L    +E+      + D      + E     K+ +  E       +L     
Sbjct: 379 PKYTLSFDLLFKGLEITTGGQRIHDYDTIIKKME-----KRGMDPEEL---ASYLMIFKY 430

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            MP   G+ +G +RL M +    N+ E    P  
Sbjct: 431 GMPPHGGLGIGLERLTMRLLDEQNVRETTMFPRD 464


>gi|15839152|ref|NP_299840.1| asparaginyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|20139947|sp|Q9PAF5|SYN_XYLFA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|9107777|gb|AAF85360.1|AE004064_2 asparaginyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 466

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 105/356 (29%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F EN +  I +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLH 113
                          D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 VNLPRTETGGIDFSHDFFGKETFLTVSGQLNVEAYALA-LSKVYTFGPTFRAENSHTPRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A     +  +     ++   +   ++  +          E   I+  E 
Sbjct: 244 LAEFWMIEPEIAFADLAEDARVAEQFLKFLFKTVLEER-TDDLAFITERVEKTTISKLEG 302

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F +             ++ +        +++G +      W           +     I 
Sbjct: 303 FIK----------SPFERIEYTDAIKLLERSGKKFDFPVEWGLDLQTEHERWLTEKH-IG 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              ++  YP    A       D +             L     E++   ++  R E    
Sbjct: 352 RPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEMLDI 405

Query: 294 EKKKIYNETYPIDE--DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +   +        DF          +G  +GF+RL++ V G +NI + I  P 
Sbjct: 406 RMAQFGLDPTHYQWYRDFRR--YGSVPHAGFGLGFERLMVYVCGLSNIRDAIPYPR 459


>gi|291296661|ref|YP_003508059.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290471620|gb|ADD29039.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 423

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 57/362 (15%), Positives = 111/362 (30%), Gaps = 53/362 (14%)

Query: 4   IPSQPWW-NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
           IP + W  N +     R            L  +  +    R Y     F EI +  +  +
Sbjct: 98  IPKEEWRVNPETLLEYRYVSLRGEKARAPLKIQAALVRGFRSYLDSQGFTEIFTPKIVSA 157

Query: 53  -PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
                +++          D+     YL  SP+   K+++    E+++  A  +R  +   
Sbjct: 158 GAEGGSNL-------FGIDYFEHRAYLAQSPQLY-KQIMVGVFERVYEVAPVFRAEQHAT 209

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  E+  L+        EQ + D    +                      + PE    
Sbjct: 210 SRHLNEYLSLDVEMGFIESEQDVMDLEEEL-----------IRAMLDEARHTAAPEC--- 255

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                    ++     + P         +  ++ G+ V  D    +   R L    +   
Sbjct: 256 -----ELLGVEWPNLAEMPRLEHPEARRILREELGMPVGADFN--EEAERALGAWAKEKW 308

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
           G++    + +YP            D   T+ F+L    +E+ +    +     Q     +
Sbjct: 309 GVD-FLFISKYPESARPFYAYPEGD-GSTRGFDLLFRGLEITSGGQRIH----QYEVLVE 362

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +   KKK  +  +     +L      MP   G A+G +RL   + G  N+      P  +
Sbjct: 363 Q--LKKKGNDPAHF--AGYLEVFKYGMPPHGGFAIGAERLTQKLVGLPNVRYARAFPRDR 418

Query: 350 SN 351
             
Sbjct: 419 HR 420


>gi|300812409|ref|ZP_07092839.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496576|gb|EFK31668.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 432

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 104/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN I  +  ++F    F++ D+  L   +P         
Sbjct: 116 LDHRHLWLRSR--RPFAIMQIRNRIFKATVDFFENEGFVKFDTPLLMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+     YL  S +   +    A   KIF F   +R        H  EF M+E
Sbjct: 167 TTELFHIDYFDHDAYLSQSGQLYGEVGAEA-FGKIFTFGPTFRAEASKTRRHLTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +        +                      E        D
Sbjct: 226 PEMAWMHQDESLDLQERFLSYVVGQVLEHC--------------------EYELSILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           L       +     L Y  A +       D  W D F       +      +    +  Y
Sbjct: 266 LDKLRPAAEGNYTRLSYDDAVKMLQEAGKDFKWGDDFGAPDEAFLSEQ--FDRPFFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH---RFEKEMQEK-KK 297
           P            +   T          E      E++   E+       + +++E    
Sbjct: 324 PVAIKPFYMKKNPENPLTYLCADV----EAPEGYGEIMGGSEREADYDTLKAQIEEAGLN 379

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++ +D   L         SG  MGF+R++  +   +++ E +  P  
Sbjct: 380 LDDYSWYLD---LRK-YGSVPHSGFGMGFERVIAWICKLDHVREAVPFPRM 426


>gi|325116898|emb|CBZ52451.1| hypothetical protein NCLIV_022400 [Neospora caninum Liverpool]
          Length = 549

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 101/334 (30%), Gaps = 31/334 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     ++      RE+ + N+F+E+ S  L    S G  +             +  +  
Sbjct: 237 QAIFRIQSETIQLFREFLLTNKFVELHSPKLIGGASEGGAS--------CFTLKYFNRDA 288

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  + A  E++F     +R        H  EFT L+     + +   + D
Sbjct: 289 CLAQSPQLYKQMAMCADFERVFEIGPVFRAENSNTHRHLCEFTGLDLEMTFKEHYSEVLD 348

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +         +    +    +     E  T  E   R   +     +    +    
Sbjct: 349 VLDELFKFIFKGLSERCKKEIDIFHQQYPAEPFTWIEETPR---LSFSEGVQMLREAGCA 405

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            +     +  +    +     +        ++     +   +L              P +
Sbjct: 406 NIPDDISEFDLSTEQEKMLGRL--------VKEKYKTDFYMLLQYPLKVRPFYTMPDPHN 457

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
             F+  ++ +  N E+ +    + D      R  +              I + ++     
Sbjct: 458 KMFSNSYDFFMRNEEIISGAQRVHDADLLTQRCLEC-------GVPPSSI-QTYIDSFRL 509

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 G  +G +R+VML  GA NI +V   P  
Sbjct: 510 GTAPHGGAGIGLERVVMLFLGAKNIRQVSLFPRD 543


>gi|317056541|ref|YP_004105008.1| tRNA synthetase class II (D K and N) [Ruminococcus albus 7]
 gi|315448810|gb|ADU22374.1| tRNA synthetase class II (D K and N) [Ruminococcus albus 7]
          Length = 444

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/332 (16%), Positives = 117/332 (35%), Gaps = 47/332 (14%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               + ++ +++R++ +   FIEI +  L  +  +E+    F  +   ++      YL  
Sbjct: 142 MFKAQTVLVNAMRQFLLGENFIEIHTPKLIGAA-SESGSSVFEVKYFDRNA-----YLAQ 195

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQLMKDCMN 138
           SP+F  +  +A+G E+IF     +R  +     H  EFT  +   ++   Y  +M     
Sbjct: 196 SPQFYKQMAMASGFERIFEVGPVFRAEKSYTSKHTTEFTGFDLEFSYINDYRDVMAMEEQ 255

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++       +K                     E    +    +      P      L  
Sbjct: 256 LLKAGLSAVKEKYGD------------------EIKELFGQDVIVPETPFPVVKLADLYK 297

Query: 199 LQAQQAGIRVAHDD--TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
              ++ G +V  ++    +    ++  E ++ +        +  + A + A  ++     
Sbjct: 298 ALEEEYGYKVPEEEKGDLTTDAEKLSYEWVKKHYNHE-FLFVTDFDAEKRAFYHMRDEK- 355

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED---FLACL 313
                ++L    +E+            +    +K+  EK         +DED   +L   
Sbjct: 356 GVPMGYDLIWRGVEITTGAQREH----RYEVLKKQAAEK--------GLDEDVKFYLEFF 403

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
               P   G  +G DRL ML+ G  +I E ++
Sbjct: 404 KYGCPPHGGFGIGVDRLTMLLLGL-HIKEAMF 434


>gi|332883057|gb|EGK03341.1| asparaginyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 494

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 108/359 (30%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            + R R          R+ +  ++ +YF +N F    +  +  S       +  F    +
Sbjct: 153 AYLRPRTNTFGAIFRIRHHMAYAIHKYFNDNGFFYFHTPIVTASDAEGAGSM--FQVTTL 210

Query: 68  IQDHIRK----------PLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +++ +            +     L  S +    +L A     I+ F   +R       
Sbjct: 211 DFNNVPRNDKGQVDYVEDFFGRQTNLTVSGQL-EGELGAMALGAIYTFGPTFRAENSNTP 269

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M    + ++     A +            F +       
Sbjct: 270 RHLAEFWMIEPEVAFYDIHDNMDLAEDFLKYLIRYALENCKDDLEFLSEHFDK------- 322

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
                  +     T ++  +          +++G +      W           +     
Sbjct: 323 ----ELIDRLNFVTANDFVRLTYTEGVEILEKSGHKFEFPVYWGADLQSEHERYLVEKH- 377

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                IL  YP    +       D +  +  ++    I E+    +   D  +   R ++
Sbjct: 378 FKRPVILTDYPKEIKSFYMKQNEDGKTVRGMDVLFPKIGEIIGGSEREADYDKLITRTKE 437

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  +   T PI   +L          +G  +GF+RL++ +TG  NI +VI  P +
Sbjct: 438 -------LGMNTDPI-WWYLETRKFGTAPHAGFGLGFERLILFITGMANIRDVIPFPRT 488


>gi|325917964|ref|ZP_08180133.1| asparaginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535821|gb|EGD07648.1| asparaginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 464

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 108/370 (29%), Gaps = 44/370 (11%)

Query: 1   MHQIPSQPWWNRD-FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDATGNVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFVA 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                 E +         A I+        +Q D        Q +G +      W     
Sbjct: 288 ------ERVDKNAISKLDAFINAP-----FEQIDYTEAVKLLQNSGKKFDFPVEWGLDLQ 336

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +     I    ++  YP    A       D +             L     E++
Sbjct: 337 TEHERWLTEEH-IGRPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 389

Query: 280 DPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +          +  E Y    DF          +G  +GF+RLV+ V G +
Sbjct: 390 GGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLS 447

Query: 338 NINEVIWTPF 347
           NI + I  P 
Sbjct: 448 NIRDAIPYPR 457


>gi|187917979|ref|YP_001883542.1| asparaginyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|119860827|gb|AAX16622.1| asparaginyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 461

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 59/354 (16%), Positives = 104/354 (29%), Gaps = 37/354 (10%)

Query: 12  RDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
                R   F      RN I   + EYF +N F  I +  +  +       I   ST   
Sbjct: 122 PHLRIRTNTFGAVARIRNQISYKIHEYFQKNGFFYIHTPIITSNDGEGAGEIFRVSTLDL 181

Query: 67  ----------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
                        D   K  +L  + +   +    A   KI+ F   +R        H  
Sbjct: 182 NNIAKGQEIDFKNDFFGKQAFLTVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRHAS 240

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A  + E  +    + ++        +  +    +   F       + +   
Sbjct: 241 EFWMIEPEMAFFTLEDNINLAEDFLKYILR----ETLNHCGQDMEFFDNFIEKGLIKKIE 296

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
                       N +         + + A         W           +   + I   
Sbjct: 297 -------DVINSNFEVITYTQAIKKLENATKTFEIKPYWGMDLQTEHERYLTEEI-IKKP 348

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE-QRHRFEKEMQE 294
           T +  YP    A       D +  K  ++    I       E  D ++    R ++   E
Sbjct: 349 TTVIDYPKEFKAFYMKMNEDNKTVKGMDILVPRIGEIIGGSEREDNLDKLNKRIKELNLE 408

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + +    + +D   L         SG  +G +RL+  +TG  NI +VI  P +
Sbjct: 409 VETLN---WYLD---LRRF-GSTPHSGFGLGLERLIQYITGMANIRDVIPFPRT 455


>gi|325922531|ref|ZP_08184292.1| asparaginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325546996|gb|EGD18089.1| asparaginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 464

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 107/370 (28%), Gaps = 44/370 (11%)

Query: 1   MHQIPSQPWWNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMSPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIVTTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMANLPRNEKGEVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEQFLKYLFRAVLDER-GDDLAFL 286

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
               E   I+  E                 +Q D        Q +G +      W     
Sbjct: 287 AERVEKNAISKLE----------AFINAPFEQIDYTEAVKLLQNSGKKFDFPVEWGLDLQ 336

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +     I    ++  YP    A       D +             L     E++
Sbjct: 337 TEHERWLTEEH-IGRPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 389

Query: 280 DPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +          +  E Y    DF          +G  +GF+RLV+ V G +
Sbjct: 390 GGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLS 447

Query: 338 NINEVIWTPF 347
           NI + I  P 
Sbjct: 448 NIRDAIPYPR 457


>gi|296242442|ref|YP_003649929.1| aspartyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095026|gb|ADG90977.1| aspartyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 420

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 108/347 (31%), Gaps = 39/347 (11%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W    +   +     R  +  + REY   N F E+ +  +  + G E     F  E 
Sbjct: 108 KYRWLLLRNPAEKAIFNIRESVFHAAREYLRRNGFHEVQTPKIV-AAGAEGGATLFKVEY 166

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
                     YL  SP+   + L+ A   +++     +R  +     H  E   ++  + 
Sbjct: 167 FEYQA-----YLSQSPQLYKQILMNAY-PRVYEITPYFRAEKFNTPRHLNESWGIDVEQG 220

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             +  + + + +  +                           +   +       ++L   
Sbjct: 221 FINGVEDVLETLENLVSYIIN-------------------YVVDNNKEDLETLGVNLERI 261

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                +     +    +  GI V+  +   D   + L E ++     +    +  +P   
Sbjct: 262 NPPFKRLKFTEVVDILKSEGIEVSEKEDLPDHAEKKLGEIMKSKG--HRLYFITGFP-WN 318

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           +        D  +T++F+L    +E+ +         +            K +  E++  
Sbjct: 319 ATGFYYMREDGSYTRKFDLDYEGLEIASGGQREHRYDKLVE-----ALILKGLNPESFQ- 372

Query: 306 DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
              +L      +P   G  +G +RL+M +    N+ E I     ++ 
Sbjct: 373 --FYLESFKYGIPPHGGFGLGVERLLMKMLNLENVREAILFVRDRTR 417


>gi|148361405|gb|ABQ59284.1| putative lysyl-tRNA synthetase [Mycoplasma arginini]
          Length = 224

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 10/233 (4%)

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            KK +  G E+++     +RN      H PEFT +E+Y A+     +M+    + +   +
Sbjct: 1   LKKCIVGGLERVYEIGRIFRNEGVDSTHNPEFTSIEFYEAYSDMWGMMERTEGVFKHLTK 60

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
             N     F   +         I + +A ++   ID+    D             A++ G
Sbjct: 61  KLNIDKVKFNGYDIEFKYPFARINMVDAVSKKIGIDVRKLND-------QEAIELAKKHG 113

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           I+         + + +  + IE    +   T +  +P   S LA     D RFT+R EL+
Sbjct: 114 IKTEKYYKLGHVINDLFEKYIEET--LIQPTFVYGHPIEISPLAFKELDDERFTQRAELF 171

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
               E  N   EL DPI+Q  RF+ ++ E++    E   ID DF+  L   +P
Sbjct: 172 IGTKEFANMFTELSDPIDQLERFKAQLDERENGNEEANEIDWDFVNALEYGLP 224


>gi|312883614|ref|ZP_07743339.1| asparaginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368837|gb|EFP96364.1| asparaginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 466

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R  +       RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVSRVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTESGNVDYNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +             + E IT  
Sbjct: 242 RHLAEFWMVEPEVAFADLNDIAKLSEDMLKYVFKAVLAECRDDLEFFAQRIDK-EAITRL 300

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D         ++G       +W    S      +     
Sbjct: 301 ENF----------VSSDFAQVDYTDAIEILLESGRDFEFPVSWGIDLSSEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRSNDDGKTVAAM------DVLAPGIGEIIGGAQREERLDIL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DQRMREMGIDPEHMSWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|256026724|ref|ZP_05440558.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289764720|ref|ZP_06524098.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289716275|gb|EFD80287.1| lysyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 258

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 17/141 (12%)

Query: 2   HQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P +     D    YR+R              +KR  I   +R+Y  E  F+E+++  
Sbjct: 122 RSLPEKYHGLTDVEIRYRKRYIDLIMNPEVRDIFIKRTEIIKEIRKYLDERGFLEVETPM 181

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +    G     R F T     + +   LYL+ + E   K+L+  G +K++     +RN  
Sbjct: 182 MHQILGGAA-ARPFITH---HNALNLDLYLRIAVELYLKRLIVGGFDKVYEMGKDFRNEG 237

Query: 109 QGCLHQPEFTMLEWYRAHESY 129
               H PEFTM+E Y+AH  +
Sbjct: 238 ISVRHNPEFTMIELYQAHADF 258


>gi|284033104|ref|YP_003383035.1| tRNA synthetase class II (D K and N) [Kribbella flavida DSM 17836]
 gi|283812397|gb|ADB34236.1| tRNA synthetase class II (D K and N) [Kribbella flavida DSM 17836]
          Length = 429

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 52/328 (15%), Positives = 92/328 (28%), Gaps = 44/328 (13%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
                  R       F EI +  +  +   E+    F       D+   P YL  SP+F 
Sbjct: 135 AAALHGFRSTLDGLDFTEIQTPKIVGTA-TESGANVF-----ALDYFGGPAYLAQSPQFY 188

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCA 143
            K+ +    E+++     +R        H  E+  L+        +  ++     ++   
Sbjct: 189 -KQTMVGVFERVYEVGPVFRAEPHDTVRHLAEYVSLDAEFGFIGDHRDVLAVLREVLAGM 247

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
                 +  +                          ++L                  A  
Sbjct: 248 LATVGSRAGTA--------------------LERLGVELPEMPGEVPVLHFTEALKLA-- 285

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRF 262
            G      D        I    +  +        ++ YP  +     +  P+DPR++  F
Sbjct: 286 -GADPDEPDLSPADERAIGEWALREHGSD--FVAVEGYPMVKRPFYTHPQPSDPRWSNSF 342

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSS 320
           +L    +EL      L        R+                P    +L      MP   
Sbjct: 343 DLLFRGVELVTGGQRLH-------RYSDYAAALAARGESADAPAYSSYLQAFQHGMPPHG 395

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFS 348
           G A+G +R V  +TGA N+ EV   P  
Sbjct: 396 GFAIGLERFVARLTGAENVREVTLFPRD 423


>gi|162448262|ref|YP_001621394.1| asparaginyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|189083267|sp|A9NE58|SYN_ACHLI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|161986369|gb|ABX82018.1| asparaginyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 463

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 52/367 (14%), Positives = 109/367 (29%), Gaps = 42/367 (11%)

Query: 5   PSQPWW--NRD-FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNE 56
           P +      R+  H R R          R++   ++ ++F E  F+ + +  L  + G  
Sbjct: 110 PKRHTREFLREVAHLRPRTNLFSAVFRVRSIAAYAIHKFFQEQDFVYVHTPILTANDGEG 169

Query: 57  THIRAFSTELIIQ--------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
                  T L +               D   +   L  + +   +   A     I+ F  
Sbjct: 170 AGAMFKVTTLDMNKPPRNEDSSIDYSKDFFGREANLTVTGQLEGEAY-AHAFRNIYTFGP 228

Query: 103 AWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A       + D M +I    +     +          
Sbjct: 229 TFRAENSNTTTHASEFWMIEPEIAFAD----LNDNMELIERMVKYVTSYVLEHAKEEMAF 284

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
           F +     +         +D               + +  +    +  +     +  ++ 
Sbjct: 285 FDKFVEKGLL------TKLDNLLKSSFKRITHEEAINILLKS-NHKFENQPKHGEDLAKE 337

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
               +          +   +P    A       D +     +L            EL+  
Sbjct: 338 HERYLTEKAFHGPVFVK-DWPKDIKAFYMRLNDDQKTVAAVDLLVPG------SGELVGG 390

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINE 341
            ++  R +  ++  + ++     +D           Q+SG  +GF+R ++ VTG  NI +
Sbjct: 391 SQREERLDVLLKRMEDMHVPVKDLDWYLDLRRYGGVQTSGFGLGFERYLIYVTGVENIRD 450

Query: 342 VIWTPFS 348
           VI  P +
Sbjct: 451 VIPFPRT 457


>gi|320104601|ref|YP_004180192.1| asparaginyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751883|gb|ADV63643.1| asparaginyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 471

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 93/358 (25%), Gaps = 41/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  +F E  F  + +  +  S       +  F    +
Sbjct: 126 AHLRPRTNTFGAVARVRHCLSMAVHRFFHERGFFWVHTPIITSSDCEGAGEM--FKVSTL 183

Query: 68  IQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +                  KP +L  S + + +    A   K++ F   +R       
Sbjct: 184 DLNNPPRDAQGQIDHSQDFFGKPAHLTVSGQLNVEAYCLA-LSKVYTFGPTFRAENSNTT 242

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A              ++       ++                     
Sbjct: 243 RHLAEFWMIEPEVAFADLATNADLAEEFLKYLFRAVLEERADDLAF-------FADRIDK 295

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +   R   +               +L     +          W           +     
Sbjct: 296 QCVNRLETLTNAQFERMDYAEAIRILEDAQTRKSASFEFPIHWGADLQSEHERYLTETH- 354

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
           +    ++  YP    A       D R     ++ A  I E+               R E+
Sbjct: 355 VGRPVVVMNYPKQIKAFYMRLNDDGRTVAAMDVLAPGIGEIIGGSQREERLDVLDTRLEE 414

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               K       +  D             +G  +GF+R ++  TG +NI +VI  P +
Sbjct: 415 LNLPK---DEYWWYRDLR----RYGTVPHAGFGLGFERTILYATGMSNIRDVIPFPRT 465


>gi|332664342|ref|YP_004447130.1| asparaginyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333156|gb|AEE50257.1| Asparaginyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 477

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 50/365 (13%), Positives = 99/365 (27%), Gaps = 42/365 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H+R R          R+ I  ++ +++ +  F  I +  +  S       +  F    +
Sbjct: 119 AHFRMRTNTFSSVFRLRHAIAFAVHKFYNDRGFFYIHTPIITGSDAEGAGEM--FHVTTL 176

Query: 68  IQDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +             +  +     L  S +   +    A   KI+ F   +R       
Sbjct: 177 DTNSPPRLEDGSVDYTQDFFGKATNLTVSGQLQGEIAALA-LGKIYTFGPTFRAENSNTP 235

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M       +       +   +   +     +E +     
Sbjct: 236 RHLAEFWMIEPEVAFNDIVDNMDLAEEFTKYLINYCLENHLADLELLDKRLAEEQNALPK 295

Query: 172 EAFARYANIDL------GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           +       I+                    +L         +      W           
Sbjct: 296 DKRRAMGLIEQLRFVVDNAFERITYTEAVEILMKSKPYKEKKFEFPVEWGSDLQSEHERY 355

Query: 226 IEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           +          +   YP    A        D        L+           E++   ++
Sbjct: 356 LVEKEFKKPVIVR-NYPKEIKAFYMRLNDDDKTVAAMDVLFP-------GIGEVIGGSQR 407

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             R +  ++  K I      +     L      P  +G  +GF+R+V  +TG +NI +VI
Sbjct: 408 EDRHDLLVERIKAIGIAEEELWWYLQLRKFGGAP-HAGFGLGFERMVQFITGMSNIRDVI 466

Query: 344 WTPFS 348
             P +
Sbjct: 467 AFPRT 471


>gi|300121274|emb|CBK21654.2| unnamed protein product [Blastocystis hominis]
          Length = 723

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 101/353 (28%), Gaps = 46/353 (13%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHI 59
           N D     R            +   + +    REY ++N F+EI +  +   +    ++ 
Sbjct: 285 NPDTRLDYRWIDLRTPCNQAIVRLSSAVCLLFREYLLQNDFVEIHTPKINPGTSEGGSN- 343

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                 +   D+      L  SP+   +     A  E++F     +R        H  EF
Sbjct: 344 ------VFKLDYFGSQACLAQSPQLYKQMTTACADFERVFEIGPVFRAENSNTHRHLTEF 397

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
             L+     + +     + +  +           F+ +            +   +     
Sbjct: 398 VGLDMEMTIKEHYYEAVNMIANMFVYIFDGLNARFAKELNAVQQQHPFTPLVYPKQ---- 453

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
                                      G  V      S    + L   ++     +   I
Sbjct: 454 -----------TLILSYSEGMQLLIDNGFDVDPMGDLSTPMEKQLGRLVKEKYNTD-FYI 501

Query: 238 LDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           LD++P           P +P+ +  ++++    E+ +    + DP     R +      +
Sbjct: 502 LDKFPLSIRPFYTMPDPHNPKLSNSYDIFIRGEEIVSGAQRIHDPELLAERAKACGISIE 561

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +          +L   +      +G  +G +R+VML  G  NI      P  
Sbjct: 562 SL--------HAYLQSFSHGAYPHAGCGIGLERVVMLFLGLPNIRYTSMFPRD 606


>gi|156938222|ref|YP_001436018.1| aspartyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156567206|gb|ABU82611.1| aspartyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 453

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 106/346 (30%), Gaps = 47/346 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                +  L   ++   ++REY     F+E+ +   +         +           + 
Sbjct: 138 RRPESQAVLRLVSLSAKAIREYLYSLNFVEVFTPKIIASGTEGGAQLVPV-------FYF 190

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            K  YL  SP+   K+LL +  E +F  A AWR+ E     H  EF  ++   A   Y  
Sbjct: 191 GKTAYLAQSPQLY-KELLTSSLEYVFEIAPAWRHEESDTPYHLAEFISVDVEMAFADYND 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +MK   N+++   +    +   +                          +         +
Sbjct: 250 VMKVLENVVKRVIDSVKNEGRKW--------------------LEVLGHEPPEVNLPIPR 289

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSD-IFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                 +   +  G+ V   + +      ++                +  +PA       
Sbjct: 290 ITYKEAWEILKAEGVEVEPGEDFGTPELRKLSEALEREGKTSGGFYFITDWPADVRPFYT 349

Query: 251 IYPADP-------RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                          ++ F+L   ++E+ +    +        R E E + KK+  N   
Sbjct: 350 KRGGKEVIGGKEVDLSESFDLNWRHLEISSGSTRIH------RRNELEEELKKRGLNPAN 403

Query: 304 PIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              E +L      MP  +G  MG  RL++ V G  N+      P  
Sbjct: 404 F--EWYLKWYDYGMPPHAGWGMGLQRLMVPVAGIPNVRLASTFPRD 447


>gi|170782886|ref|YP_001711220.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157456|emb|CAQ02645.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 438

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 66/337 (19%), Positives = 114/337 (33%), Gaps = 34/337 (10%)

Query: 9   WWNRDFHYRRRP-FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI 67
           W   D    R       +  +  +LR Y+VE+ FIE+ S  L  +P +E++   F     
Sbjct: 121 WRFIDLRAPRNSLIFRVQTTLVHALRTYWVEHDFIEVFSPKLMATP-SESNAELFKV--- 176

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH 126
             D+     YL  SP+F  +   +AG  K+F    A+R        H  EFT ++   + 
Sbjct: 177 --DYFDGVAYLAQSPQFFKQMAQSAGFGKMFEVGPAFRADPSFTSRHATEFTSVDAEISW 234

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
               + +      +  AA  A ++    +                             ++
Sbjct: 235 IESHEDVARLQEELIVAALTAVKEKHGDEIRELFDVEV-----------------TVPSI 277

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
             P  P      + A++  +    DD       R +   +    G      L  YP+   
Sbjct: 278 PFPRIPLLEAKDIVAKRGHVIDRADDDLDPEGERQIAAHVMEEFGHE-FVFLTDYPSTIR 336

Query: 247 -ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                    DP  T  ++L    +E+                 E + +EK  +  E    
Sbjct: 337 PFYHMRNAEDPSITNSYDLIWNGVEITTGAQREHRVDV----LEAQAREK-GLDPEELGS 391

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
             DF      +P   G  MG +R++ML+   +N+ EV
Sbjct: 392 YLDFFR--YGVPPHGGFGMGLNRVLMLLLHQSNLREV 426


>gi|322804910|emb|CBZ02469.1| asparaginyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 463

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 104/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+  ++  +  S       +   +T   
Sbjct: 122 AHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTMDL 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D    P  L  S + S +    A    ++ F   +R        H
Sbjct: 182 NNIPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALA-FRNVYTFGPTFRAENSNTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       + +  ++++                    F+      + + 
Sbjct: 241 ASEFWMIEPEMAFAELTDYLDNAEDMVKFVINYV----MENAPEEMAFFNSFVDKGLFDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N        N  +          Q++G +  ++  W           +   +   
Sbjct: 297 LDNVVN-------SNFKRITYTEAVELLQKSGAKFDYEVEWGIDLQTEHERYLTEQIFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +     +L    + E+               R E+  
Sbjct: 350 PV-FVTDYPKDIKAFYMRLNDDGKTVAAADLLVPGVGEIIGGSQREERLDVLEKRMEELN 408

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+            +L        + SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 409 LNKEDY--------WWYLELRKYGETKHSGYGLGFERILMYITGMTNIRDVIPFPRT 457


>gi|88704508|ref|ZP_01102222.1| asparaginyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88701559|gb|EAQ98664.1| asparaginyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 465

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 100/356 (28%), Gaps = 41/356 (11%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R+ + +++  YF +N F  +++  +  S       +   ST  
Sbjct: 125 QAHLRPRTNTFGAITRVRHTLANAVHSYFHDNGFYWVNTPIITGSDCEGAGELFRVSTLD 184

Query: 67  IIQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
           +               D      +L  S + + +    +   K++ F   +R        
Sbjct: 185 MSNIPRTPDGAVDYTQDFFGGDAFLTVSGQLAVESYCLSMS-KVYTFGPTFRAENSNTSR 243

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A            ++++        +                 I    
Sbjct: 244 HLAEFWMIEPEVAFADLADNADLAESLLKYVFRRVLNECEDDLAFFNQ------RIDNTV 297

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                A +D      N ++ D        + +G +      W    +      +     +
Sbjct: 298 IDRLTAMVDQ-----NFERMDYSDAITILKNSGKQFEFPVEWGVDLASEHERFLCEEH-V 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               +L  YP    A       D +             L     E++   ++  R +   
Sbjct: 352 GRPVVLMNYPREIKAFYMRLNDDEKTVAAM------DVLAPGIGEIIGGSQREERLDVLD 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   E      D           SG  +GF+RL+  VTG  NI + I  P +
Sbjct: 406 ARMDSQLREELWWYRDLRR--YGTVPHSGFGLGFERLINYVTGMENIRDAIPFPRT 459


>gi|302666150|ref|XP_003024677.1| aspartate-tRNA ligase, putative [Trichophyton verrucosum HKI 0517]
 gi|291188744|gb|EFE44066.1| aspartate-tRNA ligase, putative [Trichophyton verrucosum HKI 0517]
          Length = 947

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 120/331 (36%), Gaps = 27/331 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I +  R       FIEI S  LQ +   E+    F       ++  +P +
Sbjct: 277 SQSIFRIQSAISTMFRSCLDAQNFIEIHSPKLQ-AAATESGASVFGV-----NYFGRPAF 330

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +A+  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 331 LAQSPQLAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEALEV 390

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +  +      + +  +          E +   +     +  D    L++    D   
Sbjct: 391 LDSVLKSIFKTIYEKYRLEIEVIKHHFPSEDLVWLDETPIISFADGVKMLNDSGWVD--- 447

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                 + G +++  + +       L E ++     +   ILD++PA         +P D
Sbjct: 448 ------ENGNKLSETEDFGTRDEIRLGELVKEKFHTD-YYILDKFPATARPFYAMPHPDD 500

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            RFT  F+++    E+ +    +  P     R       ++   + +    E+++     
Sbjct: 501 ERFTLSFDIFVRGQEIVSGGQRIHHPDLLDKR------MREVGIDPSTI--EEYMEGFKW 552

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P  +G  +G +RL+ML+    NI      
Sbjct: 553 GAPPHAGAGIGLERLLMLILKLGNIRLGSLF 583


>gi|328952686|ref|YP_004370020.1| Asparaginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453010|gb|AEB08839.1| Asparaginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 436

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 113/346 (32%), Gaps = 40/346 (11%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAFST 64
            +  W R    R++  L  R+ I  + R++F + +F+ +D+     +     T +  F T
Sbjct: 122 HRHLWLRS--PRQQAVLRVRDEIIRACRDFFADRRFVLVDTPIFTPTACEGTTTL--FET 177

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           +        +  YL  S +    +  A    +++CF   +R  +     H  EF MLE  
Sbjct: 178 DYFG----DRKAYLTQSGQLYL-EAAALALGRVYCFGPTFRAEKSKTRRHLTEFWMLETE 232

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A    E +M     ++   A    +   +       P +  + I               
Sbjct: 233 VAFADLEDIMALAEALLCAVAVRVLENRIAELTFLERPLAPLQAIRP------------- 279

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                   P   L Y ++ +      H   W +         +  +   +   ++  YP 
Sbjct: 280 --------PFPRLSYTESLKRLTAAGHQLAWGEDLGAPEETAL--SQMYDRPVLIHHYPK 329

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
              A        P       +   ++       E++   ++    E  +   K+ +    
Sbjct: 330 ECKAFYM----KPDTVDPRTVLCVDVLAPEGVGEIIGGSQREDDLEALLTRIKEHHLPQE 385

Query: 304 PIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           P+ E +L          SG  +G +RLV    G +++ E I  P  
Sbjct: 386 PL-EWYLDLRRYGSVPHSGFGLGIERLVTWFCGLHHVREAIPFPRL 430


>gi|47570088|ref|ZP_00240747.1| aspartyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553249|gb|EAL11641.1| aspartyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 432

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 107/341 (31%), Gaps = 44/341 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERIAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVEFGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +K                     E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKKC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 278 KLLE-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED-- 308
               +P  T  F+L    +E+ +    + +       F            +    D+   
Sbjct: 336 PNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASF----------NEKGLHPDKFQS 385

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +L       P   G  +G +R++  +    N+ E    P  
Sbjct: 386 YLTTFRYGCPPHGGFGIGLERVIYKLLELTNVREASAFPRD 426


>gi|260781616|ref|XP_002585901.1| hypothetical protein BRAFLDRAFT_256666 [Branchiostoma floridae]
 gi|229270966|gb|EEN41912.1| hypothetical protein BRAFLDRAFT_256666 [Branchiostoma floridae]
          Length = 423

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 45/348 (12%), Positives = 100/348 (28%), Gaps = 37/348 (10%)

Query: 11  NRDFHYRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
                 R       L  R+   S++ ++F +  +IE+ +  +  +       +  F  ++
Sbjct: 95  FPHLRARTNSFSALLRIRSQAASAIHKFFQDEGYIEVHTPVISSNDCEGAGEL--FQVKI 152

Query: 67  IIQDH------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                         P +L  S +    +++A+   +++ F    +          EF M+
Sbjct: 153 SQDSGKDTKHFFDVPAFLTVSGQLQL-EVMASALSRVYVFGPTLQQESC----LSEFYMV 207

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A     Q  +D M +I    +   ++I +    + + F +                
Sbjct: 208 EAELAFT---QQQEDVMEVIEMMVKQPTEQILALCPEDLHLFYKFVSPGHRVIVENIL-- 262

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                     +          ++          W     +     +  + G      +  
Sbjct: 263 -----TSRFIRMTYTEAIQILKKNSENFQFTPEWGHDLQKEHERHLVRHCGSVPV-FVTD 316

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P            D +    F+L    +       EL     +  R E       ++  
Sbjct: 317 FPKELKPFYARDNDDDKTVAAFDLLVPEV------GELFGGSLREERLEILQDRLDRLGL 370

Query: 301 ETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 + +L           G  MGF+R +  + G  +I +VI  P 
Sbjct: 371 SNSY--QWYLDLRRYGSVPHGGFGMGFERYLQCILGVPHIRDVIPFPR 416


>gi|240949702|ref|ZP_04754037.1| asparaginyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295960|gb|EER46636.1| asparaginyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 467

 Score =  145 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 63/357 (17%), Positives = 113/357 (31%), Gaps = 43/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 186 ENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKVYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++       ++    +  +   F +    TV   
Sbjct: 245 LAEFWMVEPEFAFATLADNAKLAEDMLKYVFHAVLEE----RKDDLKFFEKHVDNTVISR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G       +W    S      +      +
Sbjct: 301 LENFINSDFA-------QIDYTDAIEVLLKSGKEFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDK 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              ++     P D  +   L   +  Q SG  +GF+RL++ VTG  NI EVI  P +
Sbjct: 407 RMVEMGL--NPEDYWWYRDLRRYDTVQHSGFGLGFERLIVYVTGLQNIREVIPFPRT 461


>gi|229172913|ref|ZP_04300466.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228610536|gb|EEK67805.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 428

 Score =  145 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 113/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 120 RHERTAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 173

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 174 KEAYLAQSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 233

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++   ++ P  
Sbjct: 234 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVIIEIPKI 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 274 TLLQAQEILKNKYRKESPIGDLDTEG-EKLLGKYVKETYKSELV-FITHYPKEARPMYTM 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F++     K ++ +T+     +L
Sbjct: 332 PNKENSSITDSFDLLYKGLEITSGAQRIHNYDLLLASFKE-----KGLHPDTFQ---SYL 383

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 384 NTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 422


>gi|71281666|ref|YP_269306.1| asparaginyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123761018|sp|Q481G3|SYN_COLP3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|71147406|gb|AAZ27879.1| asparaginyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 466

 Score =  145 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 51/361 (14%), Positives = 109/361 (30%), Gaps = 49/361 (13%)

Query: 13  DFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R  +       RN +  ++  +     +  I +  +  S       +   ST  
Sbjct: 124 QAHLRPRTNIGGAVTRVRNCLAQAVHRFLHSKGYFWISTPLITGSDCEGAGEMFRVSTLD 183

Query: 67  IIQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
           +               D   K  +L  S + + +    A   K++ F   +R        
Sbjct: 184 MENLPRNDEGKVDYNKDFFGKETFLTVSGQLNVETYCNA-LSKVYTFGPTFRAENSNTTR 242

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A             +++   +   ++              P+ +   +
Sbjct: 243 HLAEFWMVEPEIAFADLSDAADLAEEMLKYVFKAVLEE-------------RPDDMAFFQ 289

Query: 173 AFARYANIDLGTTLDNPD--QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                  +D   ++ N D  + D        +  G +  +  +W    +      +    
Sbjct: 290 QRVDKTVLDRLNSVINTDFVRLDYTDAITILENCGKKFENQVSWGVDLNSEHERYLAEEH 349

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE- 289
                 +   YP    +       D +     ++      L     E++   ++  R + 
Sbjct: 350 FNGPVVLQ-NYPKDIKSFYMRLNDDGKTVAAMDI------LAPGIGEIIGGSQREERLDV 402

Query: 290 KEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            + + ++   +     D  +   L        SG  +GF+RLV   TG  N+ +VI  P 
Sbjct: 403 LDSRLEEMGLDIA---DYGWYRDLRRYGTVPHSGFGLGFERLVAYATGMQNVRDVIPFPR 459

Query: 348 S 348
           +
Sbjct: 460 T 460


>gi|325679651|ref|ZP_08159226.1| nucleic acid-binding domain protein [Ruminococcus albus 8]
 gi|324108681|gb|EGC02922.1| nucleic acid-binding domain protein [Ruminococcus albus 8]
          Length = 444

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 115/331 (34%), Gaps = 45/331 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               +    +++R + +   FIEI +  L  +  +E+    F  E     +  +  YL  
Sbjct: 142 MFKVQTCFVNAMRNFLLGQNFIEIHTPKLIGAA-SESGSSVFEVE-----YFDRKAYLAQ 195

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+F  +  +A+G E+IF     +R  +     H  EFT  +   ++    + +      
Sbjct: 196 SPQFYKQMAMASGFERIFEVGPVFRAEKSYTSKHTTEFTGFDLEFSYIESYKDVMAMEEQ 255

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +      A ++ +  Q                     +    +      P      L   
Sbjct: 256 LLKVGLTAVKEQYGEQIKEL-----------------FGQEVIVPETPFPVVKLADLYKA 298

Query: 200 QAQQAGIRVAHDD--TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
             ++ G  V  ++    +    ++  E ++ +        +  Y A + A  ++   +  
Sbjct: 299 LEEEYGYTVPEEEKGDLTTDAEKLSYEWVKKHYNHE-FLFITDYDAEKRAFYHMRDEN-G 356

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED---FLACL- 313
               ++L    +E+            +    +K+ QEK         +DED   +L    
Sbjct: 357 VPMGYDLIWRGVEITTGAQREH----RYEILKKQAQEK--------GLDEDVKFYLEFFK 404

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
              P   G  +G DRL ML+TG  +I E ++
Sbjct: 405 YGCPPHGGFGLGVDRLTMLLTGL-HIKEAMF 434


>gi|94676681|ref|YP_588851.1| asparaginyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|122988112|sp|Q1LT63|SYN_BAUCH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94219831|gb|ABF13990.1| asparaginyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 467

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 105/357 (29%), Gaps = 45/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELI 67
            H R R  +       R+ +  ++  +     F  + +  +   +      +   ST  +
Sbjct: 126 AHLRPRTNIIGAVTRVRHTLAQAIHRFMHIEGFFWVSTPLITTFNCEGAGEMFRVSTLDL 185

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPYTSKGKINYEKDFFGKEAFLTVSGQLNGESYACA-LSKIYTFGPTFRAENSNTSRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +   +      +++             +  + N F+E     + + 
Sbjct: 245 LAEFWMVEPEVAFANLTDIAILAEKMLKYIFNAI----LIERVDDINFFAEQINKNIIKR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++          N  Q D        Q    +  H   W           +       
Sbjct: 301 LEQF-------ISSNFAQIDYTEAIDILQNCKQKFDHTVFWGMDLFAEHERYLADKH-FQ 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              ++  YP    A       D +             L     E++   ++  R  K + 
Sbjct: 353 APVVVTNYPKDIKAFYMRINDDGKTVAAM------DVLAPGIGEIIGGSQREERLAKLDQ 406

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +   +  N     D  +   L        SG  +G +RL++ +TG +NI +VI  P 
Sbjct: 407 RLADRGLNIE---DYWWYRDLRSYGTVPHSGFGLGLERLMIYITGMHNIRDVIPFPR 460


>gi|72080735|ref|YP_287793.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|123747980|sp|Q4A7W9|SYN_MYCH7 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|71913859|gb|AAZ53770.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 449

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 66/352 (18%), Positives = 119/352 (33%), Gaps = 30/352 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           + Q+P   + +R   +  R  +  R+ +   + ++F    FI   +  L  +   E    
Sbjct: 118 LRQMP--HFRHRSRLF--RAIMKLRSALFFEIHKFFRRQGFINFSAPILTSND-GEGAGE 172

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F  +   +D   K   L  + +   +       +K++ FA  +R        H  EF M
Sbjct: 173 VFIVDDENKDFFNKKTTLGVTGQLHAEAYALG-FKKVYTFAPTFRAERSNTRRHAAEFWM 231

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   A  +          II  A ++  + I S    N + F   E         R   
Sbjct: 232 IEPEVAFFT-------LEQIIELAVKLLQKVIKSVIIRNKDEFIFLEKAGDKNLRKRLLQ 284

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                      +    LL    ++       D  +           +   +      ++ 
Sbjct: 285 FCDSQVTQISYEKAIELLLEHQEKFE---EKDLFFGCDLKTEHERFLTEEIFHMPV-VII 340

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            YP    A       D +    F+L    I       EL+   ++  R+E   +   ++ 
Sbjct: 341 NYPKNLKAFYMHQNEDGQTVAAFDLLVPGI------GELIGGSQREVRYE---KLLARMN 391

Query: 300 NETYPIDED--FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                I+E   +L       P SSG  +GF+RL+M +TG  NI +VI  P +
Sbjct: 392 ELNMNIEEFQWYLDLRKYGNPGSSGFGLGFERLLMYITGIENIRDVIPFPRT 443


>gi|47221098|emb|CAG12792.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 474

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 106/349 (30%), Gaps = 38/349 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R       L  R+   +++  YF EN + +I +  +  +       +  F  E  I
Sbjct: 141 HLRCRTNVFGSLLRVRSEATAAIHSYFQENGYTQIHTPVITSNDCEGAGEL--FQVEPQI 198

Query: 69  Q------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                  +    P +L  S +    ++++    +++ F   +R        H  EF M+E
Sbjct: 199 SEGDANENFFSVPAFLTVSGQLHL-EIMSGAFSEVYTFGPTFRAENSQSRRHLAEFYMVE 257

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +     Q ++D   ++      A +++ +    +   F +       ++   +    
Sbjct: 258 AELSFT---QSIEDLTEVVEDVFRSATERVLTQCAEDVALFHKHVSPGHRDSVDDWLRKK 314

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                 +              ++         W     +   + +  + G      +  Y
Sbjct: 315 FPIITYSE-------AVNILNRSTQNFVFPTKWGCDLQKEHEKYLVKHCGNIPV-FVTDY 366

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            D        +      L     EL     +  R +      +    E
Sbjct: 367 PYELKPFYARDNQDHPEHTAAAV----DLLVPGVGELCGGSLREERLDLLKARLEVAGLE 422

Query: 302 ---TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++ +D   L          G  +GF+R +  V G +NI +VI  P 
Sbjct: 423 DVYSWYLD---LRRF-GSIPHGGFGLGFERYLQCVLGVDNIKDVIPFPR 467


>gi|258627615|ref|ZP_05722392.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258580197|gb|EEW05169.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 477

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 108/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 136 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 193

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  +L  S + + +    A   K++ F   +R       
Sbjct: 194 DMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNGEAYACA-LSKVYTFGPTFRAENSNTS 252

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +    +  +   F++     V 
Sbjct: 253 RHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVI 308

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++ + D           D        +  G        W    +      +     
Sbjct: 309 ARLEKFVDSDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 361

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 362 KAPVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 414

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 415 DARMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 471


>gi|66823903|ref|XP_645306.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|75009089|sp|Q75JQ1|SYDC1_DICDI RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic 1; AltName:
           Full=Aspartate--tRNA ligase 1; Short=AspRS 1
 gi|60473324|gb|EAL71270.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 576

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 53/348 (15%), Positives = 118/348 (33%), Gaps = 39/348 (11%)

Query: 13  DFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           +     R               ++ + +  RE  +   FIEI S  +  +  +E+    F
Sbjct: 250 EKRLDNRALDLRVPAHQSIFRLQSGVCTLFREQLLGEGFIEIHSPKIISAA-SESGASVF 308

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                  ++     YL  SP+   +  + A   K+F     +R        H  EF  L+
Sbjct: 309 K-----LNYFNTHAYLAQSPQLYKQMAICADFNKVFEIGPVFRAENSNTHRHLTEFVGLD 363

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
                + +     D ++ +  +     +  F+ +  + N     E         R+   +
Sbjct: 364 LEMTFKDHYHEALDTLDRLMTSIFRGLETRFAKEIESVNTQYPFEPFKFTYPSPRFTFDE 423

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L   + PD              +  D+ ++    + L + I+   G++   +   +
Sbjct: 424 AAAMLAELNDPDY-------------IVKDNDFNTRQEKRLGKIIKEKFGVDFFIVDKFH 470

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
                      P +P++   ++L+    E+C+    + DP        + +++  K +  
Sbjct: 471 VEVRPFYTMPDPNNPQWANAYDLFMRGEEICSGAQRIHDP--------ELLEKSAKSHGV 522

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + ++        Q +G  +G +R+VML  G  NI +  + P  
Sbjct: 523 VIEDIQGYIDSFKYGCSQHAGGGVGLERVVMLYLGLGNIRKASFCPRD 570


>gi|296123699|ref|YP_003631477.1| asparaginyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296016039|gb|ADG69278.1| asparaginyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 475

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 101/366 (27%), Gaps = 52/366 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          RN I  ++  YF +  F+ I +  +  S      H+        
Sbjct: 125 AHLRPRTNTFGAMARVRNAICDAIHRYFQDRGFLYIHAPIITTSDCEGAGHMFQVTTLDL 184

Query: 60  ---------------RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
                          + F  +    D   K   L  S +   +    +     + F   +
Sbjct: 185 AKLGQLQGSRSSEAGKPFEIDYTK-DFFGKKAGLTVSGQLEGEIFACSV-GDCYTFGPTF 242

Query: 105 RNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R        H  EF M+E        E  M    + +R       + + +    +   F+
Sbjct: 243 RAENSNTTRHLAEFWMIEPEMPFYELEDNMALAEDFVRS----VIKNVLARCPDDLQFFN 298

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
           +    T+       +  D                     ++G    +   W         
Sbjct: 299 DRIEPTLLATLENISGHDFIKLTYTE-------AVEILLKSGQSFEYPVGWGKDLQSEHE 351

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             +          IL  YP    +       D +  +  ++    I       E++   +
Sbjct: 352 RFLTEKHFKQPV-ILTDYPREIKSFYMRANDDGKTVRAMDVLVPGI------GEIIGGSQ 404

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           +  R E  +   ++           +L          SG  +G +R V ++TG  NI + 
Sbjct: 405 REERHEVLISRMQECGLNPADY-WWYLELREYGTVPHSGFGLGLERTVQMITGMQNIRDC 463

Query: 343 IWTPFS 348
           I  P +
Sbjct: 464 IPFPRT 469


>gi|21242368|ref|NP_641950.1| asparaginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|24212402|sp|Q8PM16|SYN_XANAC RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21107804|gb|AAM36486.1| asparaginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 464

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 108/370 (29%), Gaps = 44/370 (11%)

Query: 1   MHQIPSQPWWNRD-FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDASGAVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLA 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                 E +         A I+        +Q D        Q +G +      W     
Sbjct: 288 ------ERVDKNAIAKLEAFINAP-----FEQIDYTDAVKLLQNSGKKFDFPVEWGLDLQ 336

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +     I    ++  YP    A       D +             L     E++
Sbjct: 337 TEHERWLTEEH-IGRPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 389

Query: 280 DPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +          +  E Y    DF          +G  +GF+RLV+ V G +
Sbjct: 390 GGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLS 447

Query: 338 NINEVIWTPF 347
           NI + I  P 
Sbjct: 448 NIRDAIPYPR 457


>gi|270602102|ref|ZP_06221568.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270318244|gb|EFA29437.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 142

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 4/141 (2%)

Query: 15  HYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK 74
           +   R   + R+ + + +REYF+   F+E+++  LQ  PG  +  R F T     + +  
Sbjct: 3   NEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGAS-ARPFVTH---HNALDV 58

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
            +YL+ +PE   K+L+  G E++F     +RN      H PEFTMLE+Y+A+  Y  LM 
Sbjct: 59  DMYLRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMD 118

Query: 135 DCMNIIRCAAEVANQKIFSFQ 155
           +   ++R  A           
Sbjct: 119 NTEELLRKLAIDILGTTIVKY 139


>gi|119872193|ref|YP_930200.1| aspartyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119673601|gb|ABL87857.1| aspartyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 429

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 64/363 (17%), Positives = 125/363 (34%), Gaps = 59/363 (16%)

Query: 3   QIPSQPWW---NRDFHYRRRPFLLKR----------NMIQSSLREYFVENQFIEIDSM-S 48
            +P   W    +     + R   LKR          + I   +RE     +F+E+ +   
Sbjct: 105 PLPLDIWSETPDLATRLKWRSIDLKRPRNLAVFSLASKILREIRETLYGERFVEVFTPKI 164

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +  S      +           +  +  YL  SP+   K+ L A  E++F    A+R  +
Sbjct: 165 IVTSTEGGAELFPVL-------YFERVAYLSQSPQLY-KEQLTASLERVFEIGPAFRAEK 216

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H  EF  ++   A  +Y  +M     I++    V                     
Sbjct: 217 HNTDYHLNEFISVDAEAAFMNYHDVMDILEKIMKRVVLVL-------------------- 256

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              +E  AR   + L   +   D+  R       ++ G ++ +   W D F+  + + + 
Sbjct: 257 ---SENVARLREVGLMPVVTELDKIPRVEYDEAIEKLG-QLGYSVKWGDDFTVEMQKALM 312

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
              G      +  +PA           +   ++ ++L    IE+ +    +        R
Sbjct: 313 RFYGS--VYFIIDFPASLRPFYT-KRKENDRSESYDLIINGIEVASGATRIH------KR 363

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E E + +K+  +    + E  LA     MP  +G  +GF+RL+  + G +N+      P
Sbjct: 364 DELEEEMRKRGLDP--KLFESHLAVFDYGMPPHAGFGLGFNRLLTALLGLDNVRHATLYP 421

Query: 347 FSQ 349
             +
Sbjct: 422 RDR 424


>gi|148271740|ref|YP_001221301.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829670|emb|CAN00586.1| aspartyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 436

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 66/337 (19%), Positives = 114/337 (33%), Gaps = 34/337 (10%)

Query: 9   WWNRDFHYRRRP-FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI 67
           W   D    R       +  +  +LR Y+VE+ FIE+ S  L  +P +E++   F     
Sbjct: 119 WRFIDLRAPRNSLIFRVQTTLVHALRTYWVEHDFIEVFSPKLMATP-SESNAELFKV--- 174

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH 126
             D+     YL  SP+F  +   +AG  K+F    A+R        H  EFT ++   + 
Sbjct: 175 --DYFDGVAYLAQSPQFFKQMAQSAGFGKMFEVGPAFRADPSFTSRHATEFTSVDAEISW 232

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
               + +      +  AA  A ++    +                             ++
Sbjct: 233 IESHEDVARLQEELIVAALTAVKEKHGDEIRELFDVEV-----------------TVPSI 275

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
             P  P      + A++  +    DD       R +   +    G      L  YP+   
Sbjct: 276 PFPRIPLLEAKDIVAKRGHVIDRADDDLDPEGERQIAAHVMEEFGHE-FVFLTDYPSTIR 334

Query: 247 -ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                    DP  T  ++L    +E+                 E + +EK  +  E    
Sbjct: 335 PFYHMRNTEDPSITNSYDLIWNGVEITTGAQREHRVDV----LEAQAREK-GLDPEELGS 389

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
             DF      +P   G  MG +R++ML+   +N+ EV
Sbjct: 390 YLDFFR--YGVPPHGGFGMGLNRVLMLLLHQSNLREV 424


>gi|145530345|ref|XP_001450950.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418583|emb|CAK83553.1| unnamed protein product [Paramecium tetraurelia]
          Length = 469

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 61/358 (17%), Positives = 103/358 (28%), Gaps = 41/358 (11%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          RN +  +   +F  N  + I +  +  S       +   ST   
Sbjct: 122 AHLRPRGNFFSAVTRIRNNLAYATHVFFQNNGCLYIHTPIITGSDCEGAGEMFRISTIFD 181

Query: 67  --------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGC 111
                           QD  +K + L  S +   +    +    ++ F   +R  +    
Sbjct: 182 NDVSKIPQIKGKVDTTQDFFKKEVNLTVSGQLQVEHFCISMS-NVYTFGPTFRAEKAHTH 240

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M+     ++                +     +     + 
Sbjct: 241 RHLAEFWMIEPEFAFADLFDNMEAAEGYVKFCINYI----LQNNMDDLQFLDKRVKPGLI 296

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEKIEPNL 230
           +      + D               + L+AQQAG +  + D  W    +      I    
Sbjct: 297 DYLKDIVSKDFVRCSYTQGID----ILLKAQQAGAKFENSDIKWGMDLNSEHERFIAEK- 351

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFE 289
                  L  YP    A       D +  +  + L     EL               R +
Sbjct: 352 VFQRPVFLYDYPKEIKAFYMKVTDDGKCVRAMDMLIPQVGELIGGSQREERYDVLAQRIK 411

Query: 290 KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +   + +        +D   L          G  +GF+RLVM+VTG  NI +VI  P 
Sbjct: 412 ECGLKLEDYGP---YMD---LRK-YGTVPHCGFGLGFERLVMMVTGVENIRDVIPFPR 462


>gi|294665953|ref|ZP_06731217.1| asparaginyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604256|gb|EFF47643.1| asparaginyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 464

 Score =  145 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 108/370 (29%), Gaps = 44/370 (11%)

Query: 1   MHQIPSQPWWNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDASGNVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLA 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                 E +         A I+        +Q D        Q +G +      W     
Sbjct: 288 ------ERVDKNAIAKLEAFINAP-----FEQIDYSDAVKLLQNSGKKFDFPVEWGLDLQ 336

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +     I    ++  YP    A       D +             L     E++
Sbjct: 337 TEHERWLTEEH-IGRPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 389

Query: 280 DPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +          +  E Y    DF          +G  +GF+RLV+ V G +
Sbjct: 390 GGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLS 447

Query: 338 NINEVIWTPF 347
           NI + I  P 
Sbjct: 448 NIRDAIPYPR 457


>gi|221052406|ref|XP_002257779.1| Aspartate--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193807610|emb|CAQ38115.1| Aspartate--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 628

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 100/334 (29%), Gaps = 32/334 (9%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
               ++ I +  + + ++N FIEI +   L  S     +           ++  +  +L 
Sbjct: 315 IFCLQSQICTLFKNFLLKNNFIEIHTPKLLGESSEGGANA-------FQINYFNQKGFLA 367

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQLMKDCM 137
            SP+   +  + +G +++F  A  +R        H  E+  L+    +   + + +    
Sbjct: 368 QSPQLYKQMCINSGFDRVFEVAPVFRAENSNTYRHLCEYVSLDIEMTYKYDFLENVFFYD 427

Query: 138 NIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +         +               E     E    +   +    L   ++ D   
Sbjct: 428 SLFKHIFTELTKGEKSEMLIKTVKGQYPCEDFQWLEVTPIFTYEEAIKMLIQHNKLDLKD 487

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
             +      +    +     I                   I+  +P+            +
Sbjct: 488 EDIL--SYDMSTDMEKELGKIVKASH---------HTDYYIIINFPSALRPFYTMYKEDN 536

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P  +  ++ +    E+ +    + D        ++   +  K+          ++     
Sbjct: 537 PAISNSYDFFMRGEEILSGSQRISDVNLLLENIKRFNLDASKLN--------FYIDSFAY 588

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                SG  +G +R++ML  G NNI +    P  
Sbjct: 589 SSYPHSGCGIGLERVLMLFLGLNNIRKTSLFPRD 622


>gi|229023724|ref|ZP_04180214.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228737570|gb|EEL88076.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 370

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 111/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E+ +EN F  I +  +    G E     F        + +
Sbjct: 62  RHERIAAIFKVKSTLVQSFSEFLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 115

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 116 KEAYLAQSPQFYKQMMVAGGLERVFEVAPVYRAEHHNSSRHLNEYISLDVELGFIHDFYE 175

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 176 VMQLETDVLRYMFQQVAKIC--------------------EKELQLLQIEVPVITEIPKI 215

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 216 TLLEAQAILKNKYRKESPIGDLDTEG-EKLLGKYVKETYNSE-FVFITHYPKEARPMYTM 273

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F++     K ++ E +     +L
Sbjct: 274 PNKENEAVTDSFDLLYKGLEITSGAQRIHNHEMLLASFKE-----KGLHPEKFQ---SYL 325

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 326 NTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 364


>gi|308809533|ref|XP_003082076.1| OJ1717_A09.34 gene product (ISS) [Ostreococcus tauri]
 gi|116060543|emb|CAL55879.1| OJ1717_A09.34 gene product (ISS) [Ostreococcus tauri]
          Length = 542

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 106/349 (30%), Gaps = 42/349 (12%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               ++ + +  RE  +   F EI +  L  +  +E     F
Sbjct: 217 DTRLDNRVLDLRTPANNAIFKIQSGVGTLFREALLRRNFTEIHTPKLI-AGASEGGAAVF 275

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             + +       P  L  SP+   +  +    E +F     +R  +     H  EFT L+
Sbjct: 276 RLDYMKLG----PACLAQSPQLYKQMAIMGDLEGVFEIGPVFRAEDSNTHRHLCEFTGLD 331

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              + + +   + D ++ +  +      + F+ +          E +       R     
Sbjct: 332 MEMSIKEHYDEVLDVLDELFVSMFDGLNERFAREIGVVGTQYPFEPLQYCRPSLRLT--- 388

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                               Q AG+ V           RIL + ++   G +   +L RY
Sbjct: 389 ------------FAEGVKMLQDAGVEVDPLGDIGTETERILGKLVKEKYGTD-FYMLTRY 435

Query: 242 PA-PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P           P DP +T  F+++    E+ +    + DP     R          I  
Sbjct: 436 PINARPFYTMPAPDDPNYTNSFDIFIRGQEIISGAQRIHDPKLLAER-----ALACGIEL 490

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            T      ++           G  +G +R+ ML    NNI +    P  
Sbjct: 491 PTIQ---SYIDSFKYGATPHGGCGVGLERVAMLFLDLNNIRKTSMFPRD 536


>gi|325928164|ref|ZP_08189373.1| asparaginyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325541460|gb|EGD12993.1| asparaginyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 464

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 108/370 (29%), Gaps = 44/370 (11%)

Query: 1   MHQIPSQPWWNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDASGNVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEQFLKYLFRAVLDERGDDLAFLA 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                 E +         A I+        +Q D        Q +G +      W     
Sbjct: 288 ------ERVDKNAIAKLEAFINAP-----FEQIDYTDAVKLLQNSGKKFDFPVEWGLDLQ 336

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +     I    ++  YP    A       D +             L     E++
Sbjct: 337 TEHERWLTEEH-IGRPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 389

Query: 280 DPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +          +  E Y    DF          +G  +GF+RLV+ V G +
Sbjct: 390 GGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLS 447

Query: 338 NINEVIWTPF 347
           NI + I  P 
Sbjct: 448 NIRDAIPYPR 457


>gi|302387684|ref|YP_003823506.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302198312|gb|ADL05883.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 443

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 50/334 (14%), Positives = 106/334 (31%), Gaps = 40/334 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           R     +  I    R++     F EI +   +       ++       +   D+  K   
Sbjct: 140 RAKFRLQEGIVRGFRDFLHSQNFTEIRTPKIVARGAEGGSN-------VFKLDYFNKKAE 192

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+F  K+ +    +++F  A  +R  +     H  E+T +++   +    + + + 
Sbjct: 193 LGQSPQFY-KQTMVGVYDRVFEVAPVFRAEKHNTTRHLNEYTSMDFEMGYIDGFEEIMEM 251

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +         + +                   EA  +   + L    + P       
Sbjct: 252 ETAMLQYTFGLLCEDY-------------------EAELQMLKVSLPNVSNIPTVRFAEA 292

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA-D 255
             L A +   ++ +          ++    +   G +    +  YP+ +     +    D
Sbjct: 293 KELVAGKYNRKIRNPYDLEPEEEVLIGRYFKEEYGSD-FVFVTHYPSKKRPFYAMDDPAD 351

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P+FT  F+L    +E+      + D      + E      + +  E       +L     
Sbjct: 352 PKFTLSFDLLFKGLEVTTGGQRIHDYDTILKKMEA-----RGMNPEDI---SSYLMIFQY 403

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            MP   G+ +G +RL M +    NI E    P  
Sbjct: 404 GMPPHGGLGIGLERLTMRLLDEGNIRETTLFPRD 437


>gi|294626361|ref|ZP_06704963.1| asparaginyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292599362|gb|EFF43497.1| asparaginyl-tRNA synthetase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 464

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 107/370 (28%), Gaps = 44/370 (11%)

Query: 1   MHQIPSQPWWNRD-FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDASGNVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +        ++        +         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDALLAEQFLKYLFRAVLDERGDDLAFLA 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                 E +         A I+        +Q D        Q +G +      W     
Sbjct: 288 ------ERVDKNAIAKLEAFINAP-----FEQIDYSDAVKLLQNSGKKFDFPVEWGLDLQ 336

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +     I    ++  YP    A       D +             L     E++
Sbjct: 337 TEHERWLTEEH-IGRPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 389

Query: 280 DPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +          +  E Y    DF          +G  +GF+RLV+ V G +
Sbjct: 390 GGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLS 447

Query: 338 NINEVIWTPF 347
           NI + I  P 
Sbjct: 448 NIRDAIPYPR 457


>gi|222095813|ref|YP_002529870.1| aspartyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221239871|gb|ACM12581.1| aspartyl-trna synthetase [Bacillus cereus Q1]
          Length = 385

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 106/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++    S  E+  EN F  I +  +    G E     F        + +
Sbjct: 77  RHERIAAIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 130

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 131 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVEIGFINDFHE 190

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   ++++   +   +                      E   +   I++    + P  
Sbjct: 191 VMQLETDVLQYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 230

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 231 TLLQ-AQEILKSKYRKESPIGDLDTEGEKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 288

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 289 PNNENPSITDSFDLLYKGLEITSGAQRIHNYEMLLASF------KEKGLHPDKF--QSYL 340

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +    N+ E    P  
Sbjct: 341 NTFRYGCPPHGGFGIGLERVVCKLLELTNVREASAFPRD 379


>gi|302348258|ref|YP_003815896.1| Aspartyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328670|gb|ADL18865.1| Aspartyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 464

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 103/345 (29%), Gaps = 35/345 (10%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
              W    + +        + + +  RE+F +N F+E+ +  +  + G E     F    
Sbjct: 146 DYRWLDVRNLKVSAIFQFESWVANKFREFFRQNGFVEVFTPKIV-AAGTEGGAEVFPV-- 202

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTMLEWYRA 125
               +  +  YL  SP+F  +  + AG E++F     +R        H  EF  L+    
Sbjct: 203 ---IYFGREAYLAQSPQFYKQMAVIAGLERVFEVGPVFRAEAHHTVKHLTEFHGLDIEMG 259

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
                + + + +                          E E     E    Y ++ L   
Sbjct: 260 FIEGPEDVMNMLESFFRYL-----------------AKEAEIDDSIETVRNYFDLALRVP 302

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
              P    R    +  ++   ++ + +       R L +        +    +  YP   
Sbjct: 303 SKVPRITIREAYEVLKERYNHQLPYMEDLDPQAERELGDYALKEYDSD-FIFVTEYPWKV 361

Query: 246 SALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                   P +P +T  F+L    +E+           +           + K  N    
Sbjct: 362 RPFYTMRKPQEPEWTLGFDLLFRGLEIATGSQREHRYDQLL------ANLRDKGLNPERF 415

Query: 305 IDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + +L       P   G  +G +R+V      +N+ E    P  
Sbjct: 416 --QFYLNFFKYGAPPHGGAGLGLERIVKQFLNLDNVREARLLPRD 458


>gi|257437983|ref|ZP_05613738.1| asparagine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257199643|gb|EEU97927.1| asparagine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 462

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 57/367 (15%), Positives = 115/367 (31%), Gaps = 46/367 (12%)

Query: 1   MHQIPSQPWWNRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE 56
           +  +P+          R   F      R++   ++ ++F EN FI   S  L  S     
Sbjct: 119 LRTMPT-------LRPRTNTFNAAFRVRSVAAYAIHKFFQENGFIYSHSPLLTASDCEGA 171

Query: 57  THIRAFSTELI-------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHA 103
             +   +T  +              QD   KP+ L  S +    + +A    K++ F   
Sbjct: 172 GEMFQVTTLDLQNVPKNEDGTVDYSQDFFEKPVNLTVSGQLEA-EAMAMAFGKVYTFGPT 230

Query: 104 WRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           +R  +     H  EF M+E   A    +  M     + +                    F
Sbjct: 231 FRAEKSFTTRHAAEFWMIEPEMAFCDLKGYMDTAEAMTKFVICYV----LDNCPDEMAFF 286

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
           ++     + E     AN + G                  ++   +      W        
Sbjct: 287 NQFIDKGLIERLELVANSEFGRITYTE-------AIEILKKNNKKFQFPVEWGVDIQTEH 339

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +   +       +  YP    +      AD +     ++    I       EL+   
Sbjct: 340 ERYLTE-VVFKKPVFVTDYPKEIKSFYMKMNADGKTVAAADMLVPGI------GELIGGS 392

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           ++   ++K +    ++  +     E +L        + +G  +GF+R++M +TG  NI +
Sbjct: 393 QREENYDKLVARMDELGMDKTNY-EWYLNLRKFGGVEHAGYGLGFERMIMYLTGIQNIRD 451

Query: 342 VIWTPFS 348
           V+  P +
Sbjct: 452 VLPFPRT 458


>gi|158313365|ref|YP_001505873.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158108770|gb|ABW10967.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 433

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 63/339 (18%), Positives = 105/339 (30%), Gaps = 39/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H RR+          +  RE      F E+ +  +  S   E+    F       D+  
Sbjct: 124 RHPRRQAIFRLAAASVAGFREALTSEGFTEVHTPKIVAS-STESGANVF-----GIDYFG 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAH-ESYEQ 131
              YL  SP+F  K+ L    E++F  A  +R        H  E+  L+      E +  
Sbjct: 178 SRAYLAQSPQFY-KQTLVGVFERVFEVAPVFRAEPHDTARHLAEYVSLDAEMGFIEDHHT 236

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++K     +R   E  +        +                            +     
Sbjct: 237 VIKMVSLAVRHMVEKVSATDPEESILADQTLPRIP-----------------EQIPIIHF 279

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
            D   +  +A   G +V  +   +    R L E      G +    +  YP  +     +
Sbjct: 280 SDAQEMIQRA--TGEQVIGEPDLAPAHERWLGEWALHEFGSD-FLFVTGYPMRKRPFYTH 336

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             PA P F+  F+L    +EL      L    +       +    +    E Y     ++
Sbjct: 337 PDPARPEFSNSFDLLFRGLELVTGGQRLHRYTDYV-----QAITLRGEDPEKY---RAYI 388

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G A+G +R    +TGA N+ EV   P  
Sbjct: 389 DTFRYGMPPHGGFALGLERWTARLTGAANVREVTLFPRD 427


>gi|71275198|ref|ZP_00651485.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Dixon]
 gi|71898278|ref|ZP_00680452.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Ann-1]
 gi|170731189|ref|YP_001776622.1| asparaginyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|71164007|gb|EAO13722.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Dixon]
 gi|71732017|gb|EAO34074.1| Asparaginyl-tRNA synthetase, class IIb [Xylella fastidiosa Ann-1]
 gi|167965982|gb|ACA12992.1| asparaginyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 466

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 107/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F EN +  I +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLFGAVARIRHCLSQAVHRFFHENGYYWITTPIITTSDAEGAGQMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLH 113
                          D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 VNLPRTETGGIDFSHDFFGKETFLTVSGQLNVEAYALA-LSKVYTFGPTFRAENSHTPRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A     +  +     ++   +   ++             E   I+  E 
Sbjct: 244 LAEFWMIEPEIAFADLVEDARVAEQFLKFLFKTVLEERADDLAF-ITERVEKTTISKLEG 302

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F +             ++ +        +++  +      W           +     I 
Sbjct: 303 FIK----------SPFERIEYTDAIKLLEKSEKKFDFPVEWGLDLQTEHERWLTEKH-IG 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              ++  YP    A       D +             L     E++   ++  R E  ++
Sbjct: 352 RPVVVVNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEMLDI 405

Query: 293 QEKKKIYNETYP-IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  +   +  +     DF          +G  +GF+RLV+ V G +NI + I  P 
Sbjct: 406 RMAQFGMDPAHYQWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLSNIRDAIPYPR 459


>gi|309805636|ref|ZP_07699678.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165074|gb|EFO67315.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 433

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 110/348 (31%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN+   ++ +YF +N FI+ D+  L   +P         
Sbjct: 117 LDHRHLWLRSK--RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEG------- 167

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++     YL  S +    ++ A    KIF F   +R  E     H  EF M+E
Sbjct: 168 TTELFHIEYFNSDAYLSQSGQLY-GEVGAHAFGKIFTFGPTFRAEESKTRRHLTEFWMME 226

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ ++    +++                    F     +   E        D
Sbjct: 227 PEMAWMHQDESLEIQEGLLK--------------------FVTKRILDNCEYELSILGRD 266

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y +A +       D  W D F       I      +    +  Y
Sbjct: 267 HEKLRPTTEGNFARLSYDEAVKMLQDAGRDFKWGDDFGAPDEAFISEQY--DRPVFILNY 324

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            +       E    ++       E++   E+   ++    + ++   +
Sbjct: 325 PTAIKPFYMKKNPEN----PLEYLCADVLAPEGYGEIIGGSEREEDYDTLKAQIEEAGLD 380

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          SG  +GF+R +  +   ++I E I  P  
Sbjct: 381 LKDY-EWYLDLRKYGSVPHSGFGIGFERFLGWICKLDHIREAIPFPRL 427


>gi|269115224|ref|YP_003302987.1| Asparaginyl-tRNA-synthetase [Mycoplasma hominis]
 gi|268322849|emb|CAX37584.1| Asparaginyl-tRNA-synthetase [Mycoplasma hominis ATCC 23114]
          Length = 448

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 109/342 (31%), Gaps = 24/342 (7%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
               +R    R  +L RN +   + +YF    F+ + S  +  + G          +   
Sbjct: 120 PQLRHRTSLFRAIMLIRNSLMFEIHKYFQSKGFLNLSSPIITSNDGEGAGETLLVDDESK 179

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHE 127
               ++  +L  + +   +       +K++ F   +R        H  EF M+E   A  
Sbjct: 180 DYFFKQKAFLGVTGQLHAESYAEG-FKKVYTFGPTFRAENSHTSRHLAEFWMMEPEVAFC 238

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
             + +++   ++++       +              E +Y+   +      +++      
Sbjct: 239 DLKGIIEITDDMLKNVIANTLKNCPE----------EMKYLDSLQNNKLIESLNNFINKK 288

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                 + ++             D  +    +    + +  N+       +  YP    A
Sbjct: 289 LTIIEYKDVVENLKNYVDKFEEKDIFFGMDLASEHEKFLAENIVKGPV-AVINYPKDIKA 347

Query: 248 LANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                  D +    F+L    I EL           +   R     + K       + +D
Sbjct: 348 FYMYQNDDGKTVAAFDLLVPGIGELVGGSQRENRYQKLVDRI---NELKITQETLQWYLD 404

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              L        SSG  +GF+RLVM VTG +NI +VI  P  
Sbjct: 405 ---LRRF-GYAPSSGFGLGFERLVMYVTGTSNIRDVIPFPRV 442


>gi|218264451|ref|ZP_03478292.1| hypothetical protein PRABACTJOHN_03988 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221995|gb|EEC94645.1| hypothetical protein PRABACTJOHN_03988 [Parabacteroides johnsonii
           DSM 18315]
          Length = 349

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 105/358 (29%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R+ +  ++ ++F +  F    +  +  S       +   +T   
Sbjct: 5   AHLRPRTNTFGAVFRIRHNMAYAIHKFFHDRGFFYFHTPLITASDCEGAGQMFQVTTMNL 64

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                      +   D   K   L  S +   +    A   +I+ F   +R        H
Sbjct: 65  YDLKKDENGSIVYDNDFFGKQASLTVSGQLEGELAATA-LGQIYTFGPTFRAENSNTPRH 123

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       M+     I+   + A          +    ++     + E 
Sbjct: 124 LAEFWMIEPEVAFNDILDNMQLAEEFIKYCVQWA----LDNCMDDIKFLNDMFDKGLIER 179

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
                  D                  +A   G        W  D+ S      +E +   
Sbjct: 180 LQGVLKDDFVRLSYTEGIKILE----EAVAKGHTFEFPVYWGVDLASEHERFLVEEH--F 233

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +  +R  + 
Sbjct: 234 KRPVILTDYPKEIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYDKLLNRINE- 292

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +      +   +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 293 ------MGIPMKDM-WWYLDTRRFGTVPHSGFGLGFERLLLFVTGMTNIRDVIPFPRT 343


>gi|71006800|ref|XP_758056.1| hypothetical protein UM01909.1 [Ustilago maydis 521]
 gi|46097557|gb|EAK82790.1| hypothetical protein UM01909.1 [Ustilago maydis 521]
          Length = 1135

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 55/347 (15%), Positives = 116/347 (33%), Gaps = 35/347 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +        I ++ R +  +N F+EI +  LQ   G  +   +      + D+  +P +L
Sbjct: 467 QAIFRINAAICNNFRSHLDKNHFLEIHTPKLQ---GGASESGSSV---FMLDYFGRPAFL 520

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+   +  +AA  ++++     +R        H  E+T L+       Y   ++   
Sbjct: 521 AQSPQLFKQMCIAADFKRVYEIGPVFRAENSNTARHLTEYTGLDIEMEIVHYYDAIRVID 580

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            +++                  N   E E I            +    L         + 
Sbjct: 581 GMLKSIFVALRD----------NFKPERELIKRHFPHEDLVYPEDTLILPFAQGVRLLVQ 630

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADP 256
               ++ G     D+         L E I+     +   ILD++P+       +    D 
Sbjct: 631 SGYVEEDGSVPKEDEDLHTRAEIRLGELIKEKYNTD-YYILDKFPSSVRPFYAMEDKEDS 689

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
           + T  F+++    E+C     + D  E   +  +     K +        +++L      
Sbjct: 690 KVTNSFDIFIRGQEICTGGQRIHDIEELERKMHRLSISSKGM--------QEYLEGFRLG 741

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT-------PFSQSNQEEI 355
            P  +G  +G +RLVML     ++             P  +++ +E+
Sbjct: 742 APPHAGCGIGLERLVMLYLNLGDVRYGTLFHRDPRSLPLQKNDVDEL 788


>gi|84623953|ref|YP_451325.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|123725534|sp|Q2P326|SYN_XANOM RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|84367893|dbj|BAE69051.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 464

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 63/370 (17%), Positives = 107/370 (28%), Gaps = 44/370 (11%)

Query: 1   MHQIPSQPWWNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDATGNVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEQFLKYVFRAVLDERGDDLAFLA 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                 E +         A I+        +Q D        Q AG        W     
Sbjct: 288 ------ERVDKKAISKLEAFINAP-----FEQIDYTDAVKLLQHAGKTFDFPVEWGLDLQ 336

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +     I    ++  YP    A       D +             L     E++
Sbjct: 337 TEHERWLTEEH-IGRPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 389

Query: 280 DPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +          +  E Y    DF          +G  +GF+RLV+ V G +
Sbjct: 390 GGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLS 447

Query: 338 NINEVIWTPF 347
           NI + I  P 
Sbjct: 448 NIRDAIPYPR 457


>gi|309807984|ref|ZP_07701910.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308168773|gb|EFO70865.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 433

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 111/348 (31%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN+   ++ +YF +N FI+ D+  L   +P         
Sbjct: 117 LDHRHLWLRSK--RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEG------- 167

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++     YL  S +    ++ A    KIF F   +R  E     H  EF M+E
Sbjct: 168 TTELFHIEYFNSDAYLSQSGQLY-GEVGAHAFGKIFTFGPTFRAEESKTRRHLTEFWMME 226

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ ++    +++                    F   + +   E        D
Sbjct: 227 PEMAWMHQDESLEIQEGLLK--------------------FVTKKILDNCEYELSILGRD 266

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y +A +       D  W D F       I      +    +  Y
Sbjct: 267 PEKLRPTTEGNFARLSYDEAVKMLQDAGRDFKWGDDFGAPDEAFISEQY--DRPVFILNY 324

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            +       E    ++       E++   E+   ++    + ++   +
Sbjct: 325 PTAIKPFYMKKNPEN----PLEYLCADVLAPEGYGEIIGGSEREEDYDTLKAQIEEAGLD 380

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          SG  +GF+R +  +   ++I E I  P  
Sbjct: 381 LKDY-EWYLDLRKYGSVPHSGFGIGFERFLGWICKLDHIREAIPFPRL 427


>gi|309790508|ref|ZP_07685066.1| asparaginyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308227424|gb|EFO81094.1| asparaginyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 440

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/347 (15%), Positives = 106/347 (30%), Gaps = 38/347 (10%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
            +  W R    ++   L  R  + ++ +E+     FI  D+  L  +    T      T 
Sbjct: 120 HRHLWVRSS--KQHALLRIRAEVIAAAQEWLNAQGFIRFDTPILTATAAEGT------TN 171

Query: 66  LIIQDHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           L   D+      YL  + +   +  + +   K++CF   +R  +     H  EF M+E  
Sbjct: 172 LFGTDYFDLGRAYLAQTGQLYVESGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPE 230

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A   +   +      +    +   ++      V        + +        Y      
Sbjct: 231 VAFAEHADNLVLQEQFVSAIVQRVLERRSEDLRVLERDLEPLKRVVPPFPRLTY------ 284

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                    D  +  ++ +   +       W + F       I      +    ++R+P+
Sbjct: 285 ---------DEAIDLIREKHHEVEGCLPLAWGEDFGAAHETLIAQQ--FDRPVFIERFPS 333

Query: 244 PE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
              +      P  P      +L A     E+      + DP     R  +     +   +
Sbjct: 334 AIKAFYMQPDPDRPEVALCADLLASEGYGEIIGGSQRIHDPALLEARIREHGLSIE---D 390

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + +D             SG  MG +R V  ++G  +I E I  P 
Sbjct: 391 YRWYLDLR----RYGTVPHSGFGMGIERAVAWISGTRHIRETIPFPR 433


>gi|302036123|ref|YP_003796445.1| asparaginyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300604187|emb|CBK40519.1| Asparaginyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 430

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/347 (16%), Positives = 110/347 (31%), Gaps = 39/347 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+   L  R+ I  + R +F +  F  +D+           +    +
Sbjct: 115 MEHRHLWLRSS--RQHAVLRIRHEIIRACRNFFDDRGFTLVDAPIFTP------NACEGT 166

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T L    +  +  YL  S +    +  AA   K++CF   +R  +     H  EF M+E 
Sbjct: 167 TTLFQTQYFDETAYLTQSGQLYS-EATAAAFGKVYCFGPTFRAEKSKTRRHLMEFWMVEP 225

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A      +M      +        +   +   +     ++ E +T             
Sbjct: 226 EVAFAQLPDMMDLAEQFLAHIVAAVLKSRRAELLLLERDPAKLERVT------------- 272

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                    P   + Y +A     R  +     D F       +      +   I+ RYP
Sbjct: 273 --------APFPRITYEEAIDILQRKGNPAKPGDDFGADDETILSKE--FDRPVIVHRYP 322

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A   A            +R +L  C   L       +    QR    +++  + + ++  
Sbjct: 323 AALKAFYMETDP-----ERPDLALCMDVLAPEGYGEIIGGGQRIHSHEKLLGRIREHHLP 377

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + +L          +G  MG +R V  + G +++ E I  P  
Sbjct: 378 VEAFQWYLDLRRFGSVPHAGFGMGIERAVAWICGLDHVRETIPFPRM 424


>gi|258620161|ref|ZP_05715200.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|262171670|ref|ZP_06039348.1| asparaginyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|258587519|gb|EEW12229.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|261892746|gb|EEY38732.1| asparaginyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 466

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 108/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNGEAYACA-LSKVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +    +  +   F++     V 
Sbjct: 242 RHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVI 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++ + D           D        +  G        W    +      +     
Sbjct: 298 GRLEKFVDSDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DARMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|309809859|ref|ZP_07703709.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308169811|gb|EFO71854.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 433

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 110/348 (31%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN+   ++ +YF +N FI+ D+  L   +P         
Sbjct: 117 LDHRHLWLRSK--RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEG------- 167

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++     YL  S +    ++ A    KIF F   +R  E     H  EF M+E
Sbjct: 168 TTELFHIEYFNSDAYLSQSGQLY-GEVGAHAFGKIFTFGPTFRAEESKTRRHLTEFWMME 226

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ ++    +++                    F     +   E        D
Sbjct: 227 PEMAWMHQDESLEIQEGLLK--------------------FVTKRILDNCEYELSILGRD 266

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y +A +       D  W D F       I      +    +  Y
Sbjct: 267 PEKLRPTTEGNFARLSYDEAVKMLQDAGRDFKWGDDFGAPDEAFISEQY--DRPVFILNY 324

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            +       E    ++       E++   E+   ++    + ++   +
Sbjct: 325 PTAIKPFYMKKNPEN----PLEYLCADVLAPEGYGEIIGGSEREEDYDTLKAQIEEAGLD 380

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          SG  +GF+R +  +   ++I E I  P  
Sbjct: 381 LKDY-EWYLDLRKYGSVPHSGFGIGFERFLGWICKLDHIREAIPFPRL 427


>gi|58582041|ref|YP_201057.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188576346|ref|YP_001913275.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|75435313|sp|Q5H049|SYN_XANOR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|58426635|gb|AAW75672.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188520798|gb|ACD58743.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 464

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 63/370 (17%), Positives = 107/370 (28%), Gaps = 44/370 (11%)

Query: 1   MHQIPSQPWWNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDATGNVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEQFLKYVFRAVLDERGDDLAFLA 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                 E +         A I+        +Q D        Q AG        W     
Sbjct: 288 ------ERVDKNAISKLEAFINAP-----FEQIDYTDAVKLLQHAGKTFDFPVEWGLDLQ 336

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +     I    ++  YP    A       D +             L     E++
Sbjct: 337 TEHERWLTEEH-IGRPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 389

Query: 280 DPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +          +  E Y    DF          +G  +GF+RLV+ V G +
Sbjct: 390 GGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLS 447

Query: 338 NINEVIWTPF 347
           NI + I  P 
Sbjct: 448 NIRDAIPYPR 457


>gi|170761787|ref|YP_001785939.1| asparaginyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169408776|gb|ACA57187.1| asparagine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 463

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 102/357 (28%), Gaps = 43/357 (12%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          R++   ++ ++F E  F+  ++  +  S       +   +T   
Sbjct: 122 AHLRPRSNAFSAVFRVRSLAAYAVHKFFQEKGFVYTNTPIITGSDCEGAGEMFQLTTMDL 181

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D    P  L  S + S +    A    ++ F   +R        H
Sbjct: 182 NNIPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALA-FRNVYTFGPTFRAENSNTARH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       + +   +++                    F+      + + 
Sbjct: 241 ASEFWMIEPEMAFAELTDYLDNAEEMVKFVINYV----MENAPEEMAFFNSFVDKGLFDR 296

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                N D                    Q++G +  ++  W           +   +   
Sbjct: 297 LDNVVNSDFKRITYTE-------AVELLQKSGAKFDYEVEWGIDLQTEHERYLTEQIFKK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +     +L    + E+               R E+  
Sbjct: 350 PV-FVTDYPKGIKAFYMRLNDDGKTVAAADLLVPGVGEIIGGSQREERLDVLEKRMEELN 408

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+            +L        + SG  +GF+R++M +TG  NI +VI  P +
Sbjct: 409 LNKEDY--------WWYLELRKYGETKHSGYGLGFERILMYITGMTNIRDVIPFPRT 457


>gi|28378421|ref|NP_785313.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254556629|ref|YP_003063046.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300767363|ref|ZP_07077275.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180575|ref|YP_003924703.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|38258520|sp|Q88WA8|SYN2_LACPL RecName: Full=Asparaginyl-tRNA synthetase 2; AltName:
           Full=Asparagine--tRNA ligase 2; Short=AsnRS 2
 gi|28271257|emb|CAD64161.1| asparagine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254045556|gb|ACT62349.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300495182|gb|EFK30338.1| asparagine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308046066|gb|ADN98609.1| asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 432

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 111/351 (31%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R    +  RN +     E+F +  FI++DS  L   +P         
Sbjct: 116 LDHRHLWLRSK--RPWAIMNIRNEVIRGTYEFFNQEGFIKMDSPILTGSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++  +  YL  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 167 TTELFHTEYFDRDAYLSQSGQLYAEAGALAY-GKVFTFGPTFRAEKSKTRRHLIEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    EQ ++     I    +                      I   +        D
Sbjct: 226 PEMAFMHQEQSLEVQERYIAFLVQGV--------------------IDHCQYALDILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + T       P   + Y +A +       D  W   F       +  +   +    +  Y
Sbjct: 266 VETLKKYTKLPYPRISYDEAIELLKENDFDVDWGVDFGSPEETFLADH--FDQPVFVLNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE-KKKI-- 298
           P             P  T+   +   ++       E++   E+   +   + + K+    
Sbjct: 324 PKAIKPFYM----KPHPTRDDVVICADLLAPEGYGEIIGGSERATDYNYLLDQIKQAGLN 379

Query: 299 -YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +  + +D   L         +G  +G +R +  +T  +++ E I  P  
Sbjct: 380 PDDYAWYLD---LRK-YGSVPHAGFGLGLERFLTWITAEDHVRETIPFPRL 426


>gi|153212269|ref|ZP_01948057.1| asparaginyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124116647|gb|EAY35467.1| asparaginyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 481

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 108/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 140 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 197

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  +L  S + + +    A   K++ F   +R       
Sbjct: 198 DMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAIS-KVYTFGPTFRAENSNTS 256

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +    +  +   F++     V 
Sbjct: 257 RHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVI 312

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++ + D           D        +  G        W    +      +     
Sbjct: 313 ARLEQFVDSDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 365

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 366 KAPVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 418

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 419 DARMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 475


>gi|153826594|ref|ZP_01979261.1| asparaginyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149739606|gb|EDM53826.1| asparaginyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 481

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 108/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 140 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 197

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  +L  S + + +    A   K++ F   +R       
Sbjct: 198 DMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAIS-KVYTFGPTFRAENSNTS 256

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +    +  +   F++     V 
Sbjct: 257 RHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVI 312

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++ + D           D        +  G        W    +      +     
Sbjct: 313 ARLEQFVDSDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 365

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 366 KAPVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 418

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 419 DARMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 475


>gi|309803988|ref|ZP_07698070.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|309807267|ref|ZP_07701237.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|312871781|ref|ZP_07731869.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312873007|ref|ZP_07733067.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874136|ref|ZP_07734170.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|312875635|ref|ZP_07735636.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|315653550|ref|ZP_07906470.1| asparagine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325912180|ref|ZP_08174578.1| asparagine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325912564|ref|ZP_08174947.1| asparagine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|329920287|ref|ZP_08277071.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|308163907|gb|EFO66172.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308166327|gb|EFO68536.1| asparagine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|311088889|gb|EFQ47332.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311090206|gb|EFQ48616.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091529|gb|EFQ49913.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092723|gb|EFQ51079.1| asparagine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|315488912|gb|EFU78554.1| asparagine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325476130|gb|EGC79298.1| asparagine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325477985|gb|EGC81114.1| asparagine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|328936332|gb|EGG32780.1| asparagine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 433

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 110/348 (31%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN+   ++ +YF +N FI+ D+  L   +P         
Sbjct: 117 LDHRHLWLRSK--RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEG------- 167

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++     YL  S +    ++ A    KIF F   +R  E     H  EF M+E
Sbjct: 168 TTELFHIEYFNSDAYLSQSGQLY-GEVGAHAFGKIFTFGPTFRAEESKTRRHLTEFWMME 226

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ ++    +++                    F     +   E        D
Sbjct: 227 PEMAWMHQDESLEIQEGLLK--------------------FVTKRILDNCEYELSILGRD 266

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y +A +       D  W D F       I      +    +  Y
Sbjct: 267 PEKLRPTTEGNFARLSYDEAVKMLQDAGRDFKWGDDFGAPDEAFISEQY--DRPVFILNY 324

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            +       E    ++       E++   E+   ++    + ++   +
Sbjct: 325 PTAIKPFYMKKNPEN----PLEYLCADVLAPEGYGEIIGGSEREEDYDTLKAQIEEAGLD 380

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          SG  +GF+R +  +   ++I E I  P  
Sbjct: 381 LKDY-EWYLDLRKYGSVPHSGFGIGFERFLGWICKLDHIREAIPFPRL 427


>gi|163751754|ref|ZP_02158972.1| asparaginyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161328406|gb|EDP99565.1| asparaginyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 329

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/343 (16%), Positives = 103/343 (30%), Gaps = 40/343 (11%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL-------------II 68
             RN +  ++  ++ E  FI + +  +  S       +   ST                 
Sbjct: 2   RVRNCLSQAIHRFYHEEGFIWVSTPLITASDCEGAGEMFQVSTLDMENLPRTDEGKVDYS 61

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHE 127
           +D   K  +L  S + + +    A   K++ F   +R        H  EF M+E   A  
Sbjct: 62  EDFFGKEAFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTSRHLAEFWMVEPEVAFA 120

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
             + +      +++       ++    +  + + F++    TV E    +   D      
Sbjct: 121 DLDDIAALAEQMLKFCFRAVLEE----RRDDLDFFAQRVDKTVIERLESFVTSDFAQV-- 174

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                D        +  G +  +   W           +          +   YP    A
Sbjct: 175 -----DYTEAVEILKNCGKKFEYAVEWGIDLQSEHERYLAEEHFKAPVVVK-NYPKDIKA 228

Query: 248 LANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                  D +     ++ A  I E+               R E+    K+         D
Sbjct: 229 FYMRLNDDGKTVAAMDILAPGIGEIIGGAQREERLDVLDARLEEMNLSKE---------D 279

Query: 307 EDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +   L        +G  +GF+RLV  VTG  NI +VI  P 
Sbjct: 280 YWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVANIRDVIPFPR 322


>gi|156095123|ref|XP_001613597.1| aspartate-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148802471|gb|EDL43870.1| aspartate-tRNA ligase, putative [Plasmodium vivax]
          Length = 631

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/336 (13%), Positives = 111/336 (33%), Gaps = 36/336 (10%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
               ++ I +  + + +EN FIEI +   L  S     +           ++  +  +L 
Sbjct: 318 IFCLQSQICTIFKNFLLENNFIEIHTPKLLGESSEGGANA-------FQINYFNQKGFLA 370

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQLMKDCM 137
            SP+   +  + +G +++F  A  +R        H  E+  L+    +   Y + +    
Sbjct: 371 QSPQLYKQMCINSGFDRVFEVAPVFRAENSNTYRHLCEYVSLDVEMTYKYDYLENVHFYD 430

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           ++ +      ++   +   +                  +Y   D     + P       +
Sbjct: 431 SMFKHIFTELSKGGKNEMLIKTVK-------------GQYPCEDFQWLEETPIFTYEEAI 477

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIE---KIEPNLGINCCTILDRYPAPESALANIYPA 254
            +  Q   + +  ++  +   S  + +   KI          I+  +P+       +Y  
Sbjct: 478 KMLIQHGKLHLKEEEILAYDMSTDMEKELGKIVKASHHTDYYIIINFPSALRPFYTMYKE 537

Query: 255 D-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           D P  +  ++ +    E+ +    + D        ++   +  K+          ++   
Sbjct: 538 DEPAISNSYDFFMRGEEILSGSQRISDVNLLLENIKRFNLDANKLN--------FYIDSF 589

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  SG  +G +R++ML  G NNI +    P  
Sbjct: 590 AYSSYPHSGCGIGLERVLMLFLGLNNIRKTSLFPRD 625


>gi|145602945|ref|XP_362236.2| hypothetical protein MGG_13783 [Magnaporthe oryzae 70-15]
 gi|145011291|gb|EDJ95947.1| hypothetical protein MGG_13783 [Magnaporthe oryzae 70-15]
          Length = 932

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/335 (15%), Positives = 107/335 (31%), Gaps = 35/335 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H   +     R  +  + R    +  F+EI +  +  +   E+    F       ++  
Sbjct: 293 RHPANQALFRVRAAVTRTFRWTLDQQDFVEIQTPKI-MAGATESGAEVFKV-----NYFG 346

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           +  YL  SP+ S +  ++A  ++++     +R        H  E+T L+          +
Sbjct: 347 RSAYLAQSPQLSKQMAISADFKRVYEVGPVFRAENSNTHRHLTEYTGLDIE------MCI 400

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            +    IIR    V      +   +                  R+ + DL    + P   
Sbjct: 401 DQSHHEIIRMVDRVLKNIFAAVHQMEELKIIR----------ERWPSEDLVWLEETPILT 450

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NI 251
               L +  +     +  DD  +    R+     E         ILD++P        + 
Sbjct: 451 FPEALQMLREDGNEDIEEDDLSTRDEYRLGELVKEK--YKTDYFILDKFPTIARPFYTHK 508

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
             +DP++T  F+++    E+C     +    E R            +        E++LA
Sbjct: 509 DDSDPKWTNSFDIFVRGQEICTGGQRIHKYDELRQSMTDSGISGDGM--------EEYLA 560

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 P   G  +G +R++  +    ++      
Sbjct: 561 AFESGAPPHGGAGLGLERIITFMLQLGDVRNAAPF 595


>gi|254519491|ref|ZP_05131547.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226913240|gb|EEH98441.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 428

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 120/340 (35%), Gaps = 37/340 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N+I  S RE+ +   F EI +  +              TE+   ++  
Sbjct: 121 RHEKVNSIFKIQNIIVQSFREFLINKGFTEIFTPKI--VAEGAEGG----TEVFKVEYFE 174

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQL 132
           K  YL  SP+F  + ++ AG E++F  AH +R  +     H  E+  ++      + E  
Sbjct: 175 KTAYLAQSPQFYKQMMVGAGFERVFEVAHVYRAEQHNTSRHLNEYISMDLEIGFINDEFD 234

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + +    +      A +                      + + +  N+++     +  + 
Sbjct: 235 IMNLEEDLIKFILKAIEVK-------------------GKEYLKILNVNIPKIDVSIPKI 275

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           + +      ++   +   +        +++ +  +   G +    L  YP  +  +  + 
Sbjct: 276 ELNEAIEILKKVYGKGDLEGDLDPEGEKLICKYAKEKYGCD-FIFLTNYPKRKRPMYTM- 333

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           P + + T+ F+L    +E+      + D        E      K +  + Y   E +   
Sbjct: 334 PFEEQGTRSFDLLFKGVEITTGGQRINDYNMLIKSIEN-----KGLNPKDY---ESYTDI 385

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
               MP+  G+A+G +R+   +    N+ E    P  ++ 
Sbjct: 386 FRYGMPKHGGLAIGLERITTQLLNLENVREASLIPRDRTR 425


>gi|268317015|ref|YP_003290734.1| asparaginyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262334549|gb|ACY48346.1| asparaginyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 501

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/396 (15%), Positives = 116/396 (29%), Gaps = 68/396 (17%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R    +  RN +  ++ ++F E  F+++D+  L  +    T      
Sbjct: 117 MDHRHLWLRSR--RPWAIMRIRNRVIRAIHDFFQERGFLQLDAPILTGNAVEGT------ 168

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T L   D+     YL  S +    + +A    K++ F   +R  +     H  EF M+E 
Sbjct: 169 TTLFEIDYFGDKAYLSQSGQLYA-EAMAMAFGKVYTFGPTFRAEKSKTRRHLTEFWMIEP 227

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV-------NCNPFSEPEYITVAEAFA 175
             A    E  M     ++    +   +   +   V                 +T +EA  
Sbjct: 228 EMAFYDLEMNMALAEELVVHIVQEVLRHCRTELEVLGRDIAALERVQPPFPRLTYSEAVE 287

Query: 176 RYANIDLGTTLDNPDQPDRHLLY----------------LQAQQAGIRVAHDDTWSDIFS 219
              + +    +D   +  +                     +A++  I     +    +  
Sbjct: 288 LLRSDETARMIDARIEALKEEQRQLETERAENRRRYGQAKKAEKRRIDAREIEINQRLDE 347

Query: 220 RILIEKIEP-----------------------NLGINCCTILDRYPAPESALANIYPADP 256
                +  P                           +   I+ R+PA   A         
Sbjct: 348 IEKELENLPLWKESARNFQWGNDFGNSDETVLTWHFDRPIIVHRFPAAIKAFYMKRDP-- 405

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRH---RFEKEMQEKKKIYNETYPIDEDFLA-C 312
              +   L      L       +    QR     F +   E   +  E +   E +L   
Sbjct: 406 ---EDDRLALGMDVLAPEGYGEIIGGGQRADDLAFLEAQIEAHGLPREAF---EWYLDLR 459

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  SG  +G +R +  + G +++ EVI  P  
Sbjct: 460 RYGTVPHSGFGLGLERTLAWICGVHHVREVIPFPRL 495


>gi|146189668|emb|CAM92102.1| hypothetical protein [Eristalis tenax]
          Length = 243

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 85/225 (37%), Gaps = 10/225 (4%)

Query: 98  FCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN- 156
           +     +RN      H PEFT  E+Y A+  Y  L+     +I    +  +       + 
Sbjct: 21  YEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYSDLIDMTEKMISGMVKAIHGSYKIKYHP 80

Query: 157 -------VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                     +       +++ +      N+          +     L     +  +   
Sbjct: 81  DGPEGEEQEIDFTPPFRRVSMIKTLEEKLNVKFPCPTTLNTKETADFLSQLCIKHQVECP 140

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
              T + +  +++ E IE        T +  +P   S LA  +  +P  T+RFEL+    
Sbjct: 141 SPRTAARLLDKLVGEFIEETC--INPTFICEHPQVMSPLAKYHRKEPGLTERFELFVMKK 198

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           E+CNA  EL DP+ QR RFE++  +K     E   +DE+F   L 
Sbjct: 199 EICNAYTELNDPVVQRERFEQQAGDKAAGDGEAQLVDENFCTALE 243


>gi|171186429|ref|YP_001795348.1| aspartyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935641|gb|ACB40902.1| aspartyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 429

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/363 (17%), Positives = 122/363 (33%), Gaps = 59/363 (16%)

Query: 3   QIPSQPWWN-RD--FHYRRRPFLLKR----------NMIQSSLREYFVENQFIEIDSM-S 48
            +P   W +  D     R R   LKR          + +   +R+     +F+E+ +   
Sbjct: 105 PLPLDIWSDTPDLATRLRWRSVDLKRPRNLAVFTLSSEVLKEIRQVLYGERFVEVFTPKI 164

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +  S      +           +  +  YL  SP+   K+ L A  E++F    A+R  +
Sbjct: 165 IVTSTEGGAELFPVL-------YFERVAYLSQSPQLY-KEQLTASLERVFEIGPAYRAEK 216

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H  EF  ++   A  SY+ +M     I R                          
Sbjct: 217 HNTDYHLNEFISVDAEAAFMSYQDVMDVLEKITRRVFTAV-------------------- 256

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            +  EA  +   I   T + +       + Y +A      + +   W D  +  +   + 
Sbjct: 257 -SKHEAKLKEVGI---TPIASEISEVPRVDYDEAVDRLSGMGYAVRWGDDLNVEMQRALM 312

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            + G      +  YPA           +   ++ ++L    IE+ +    +        R
Sbjct: 313 KHYG--PAYFIVNYPASLRPFYT-KRREGDKSESYDLIINGIEVASGATRIH------RR 363

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E E + +K+  +    + E  LA     MP  +G  +GF+RL+  V   +N+   +  P
Sbjct: 364 DELEEEMRKRGLDP--KLFESHLAVFDYGMPPHAGFGLGFNRLITAVLNLDNVRHAVLYP 421

Query: 347 FSQ 349
             +
Sbjct: 422 RDR 424


>gi|327310573|ref|YP_004337470.1| asparaginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947052|gb|AEA12158.1| asparaginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 431

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 109/348 (31%), Gaps = 41/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    + +  L  R+ +  ++ EYF    + E+       +   E     F 
Sbjct: 116 LDVRHLWLRSR--KMQAVLKIRHTVFGAIHEYFRSRGYYEVQGPMFITAAV-EGGATLFK 172

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
                  +    +YL  S +F  +  + +  EK++  A ++R        H  EF   E 
Sbjct: 173 VP-----YFDDVVYLTQSSQFYLEAFIFS-LEKVYTIAPSFRAEPSRTRRHLTEFWHAEA 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    + LMK    +I        ++      +        E +        Y     
Sbjct: 227 EMAWYHLDDLMKVNEELISHIVSKVLEERLDELKLLGRKTEPLEAVKPPFYRVSY----- 281

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                     D  +  L+A+   I+      W D         +   L  +    L  +P
Sbjct: 282 ----------DEAVDILKAKGVDIK------WGDDLGADEERIL--TLQFDKPIQLYGFP 323

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK-KKIYNE 301
               A    +  DP+  +          L       +    +R   EKE+  K ++    
Sbjct: 324 EKVKAFY--HRNDPQRPEVTLSV---DVLAPEGYGEIIGGGERIYDEKELVSKIERFGLN 378

Query: 302 TYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + ++          SG  +G DR+VM + G ++I + +  P  
Sbjct: 379 PKDY-QWYIDLRRYGSVPHSGFGLGVDRVVMWIAGLDHIRDAVPFPRD 425


>gi|297578880|ref|ZP_06940808.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297536474|gb|EFH75307.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 481

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 107/360 (29%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 140 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 197

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  +L  S + + +    A   K++ F   +R       
Sbjct: 198 DMENLPCTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAIS-KVYTFGPTFRAENSNTS 256

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +    +  +   F++     V 
Sbjct: 257 RHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVI 312

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++   D           D        +  G        W    +      +     
Sbjct: 313 ARLEQFVESDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 365

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 366 KAPVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 418

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 419 DARMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 475


>gi|240279869|gb|EER43374.1| lysyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 541

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 91/260 (35%), Gaps = 11/260 (4%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ I   +R +F++  F+E+++  L    G     R F T         +PL L+
Sbjct: 230 DILRARSSIIQYIRSFFLDRSFMEVETPILASVAGGAV-ARPFQTSATEF--PDRPLSLR 286

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+  G +K+F    ++RN      H PEFT  E+Y A    E L+    + 
Sbjct: 287 IAPELWLKRLVVGGFDKVFEIGPSFRNEGLDKTHNPEFTTCEFYHAFADLETLITLTESF 346

Query: 140 IRC---AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
                      N+ + +      +  +    +             L      P +     
Sbjct: 347 FTGLDRHIRHLNETLETLSPTTTSFAAPFCRLDFIPDLETAMCHKLPDFTTTPTEEATKT 406

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA--LANIYPA 254
           +    +Q    +  +     +  R+    +EP       T +  +P   S    +  +P 
Sbjct: 407 VIQLFEQLSHPLPTNPNLPRLLDRLSAIYLEPQCRD--PTFIINHPECLSPLSKSFTHPT 464

Query: 255 D-PRFTKRFELYACNIELCN 273
                  R EL+    E+ N
Sbjct: 465 CGQTVAARAELFIDQREVVN 484


>gi|240047394|ref|YP_002960782.1| asparaginyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984966|emb|CAT04959.1| Asparaginyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 447

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 118/357 (33%), Gaps = 40/357 (11%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           + QIP      R      R  +  R+ +   +  +F    F+   +  L  +   E    
Sbjct: 116 LRQIP----HIRHRTKLFRAVMRLRSALFFEINSFFENEGFLNFSAPILTSND-GEGAGE 170

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F  +        K   L  + +   +        K++ FA  +R  +     H  EF M
Sbjct: 171 TFLVDDEKGGFFNKKTTLGVTGQLHAESYALG-FGKVYTFAPTFRAEKSNTKKHAAEFWM 229

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   A  + + ++     +++   +   +K                     +   +Y  
Sbjct: 230 VEPEVAFFNLQDIIGLGDKMLKFVIKNVLEKNK----------------DEFDFLEKYLG 273

Query: 180 IDLGT-TLDNPDQPDRHLLYLQAQQAGIRVAH-----DDTWSDIFSRILIEKIEPNLGIN 233
           I +    L+    P + + Y  A +  ++        D  +           +  N+  N
Sbjct: 274 IKIRQRLLEFYKSPVKQIDYKDAIELLLKHKDQFEVQDLYFGADLKTEHERFLAENI-FN 332

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP    A       D +    F+L    I EL       +   +   R ++  
Sbjct: 333 APVAVINYPKSLKAFYMHQNDDGKSVAAFDLLVPGIGELIGGSQREVRYEKLLERIQELN 392

Query: 293 QEKKKIYNETYPID-EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             ++   +  + +D   F         SSG  +GF+RLVM +TG +NI +VI  P +
Sbjct: 393 MSQE---DLQWYLDLRKFGNA--G---SSGFGLGFERLVMYITGIDNIRDVIPFPRT 441


>gi|149196138|ref|ZP_01873194.1| asparaginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149140985|gb|EDM29382.1| asparaginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 459

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 105/359 (29%), Gaps = 45/359 (12%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI------- 59
             H R R       +  RN +  +  ++F    F+ + +  +  S       +       
Sbjct: 117 SAHLRCRTNSIGAVMRVRNQLSKATHDFFQNRHFLNLHTPIITASDCEGAGQMFQVTTLD 176

Query: 60  --RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
             +    +L   D+      K  +L  S + + +        +I+ F   +R        
Sbjct: 177 MDKPPKNDLNKVDYKKDFFGKKTHLTVSGQLNGETYACG-LGRIYTFGPTFRAENSNTSR 235

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    E+      + ++   +   +                + +   +
Sbjct: 236 HLSEFWMVEPEAAFFELEENADLARDYLKYCFKSVLETSA-------------DDLEFFD 282

Query: 173 AFARYANIDLGTTLDNPDQP--DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                  I    TL + +             ++   +      W           +   +
Sbjct: 283 QRIEKGIITKLETLSDAEFTRITYTEAVKLLEKTDKKFEFPVKWGIDLQSEHERYLTEEI 342

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                 I+  YP    A       D +  +  ++    I       E++   ++    + 
Sbjct: 343 FKQPV-IVTDYPKDIKAFYMKLNDDEKTVRALDVLCPQI------GEIIGGSQREENLDL 395

Query: 291 EMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +   K +          +L          SG  +GF+RLV   TG +NI +VI  P +
Sbjct: 396 LLNRMKTLDLNPEDY-SWYLDLRRYGSVPHSGFGLGFERLVQFCTGMSNIRDVIPFPRT 453


>gi|70989089|ref|XP_749394.1| aspartyl-tRNA synthetase Dps1 [Aspergillus fumigatus Af293]
 gi|66847025|gb|EAL87356.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus fumigatus
           Af293]
 gi|159128809|gb|EDP53923.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus fumigatus
           A1163]
          Length = 555

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 105/322 (32%), Gaps = 32/322 (9%)

Query: 34  EYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
           EY +++    I +  L  +   E     F  +   ++      YL  SP+   +  +A  
Sbjct: 253 EYMIKSGSRWIFTPKLVGAA-TEGGSNVFEVKYFKRNA-----YLAQSPQLYKQMCIAGD 306

Query: 94  EEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
            E +F  A  +R  +     H  EF  L++ +   S+   + +    +        ++ +
Sbjct: 307 MESVFEIAPVFRAEDSNTHRHLTEFAGLDFEKTFRSHYHEVLEFAENLLVFILSQLKERY 366

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
             Q                      A            + +        ++AG+ V+  +
Sbjct: 367 KDQIAIIQKSYP------------KAGDFKLPKDGKALRLNYMDGVALLKEAGVDVSEQE 414

Query: 213 TWSDIF----SRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYAC 267
            + +       + L + I      +   +LD++P           P DPRF+  ++ +  
Sbjct: 415 RFENDLTTAMEKQLGQIIRDKYDTD-FYVLDKFPMAVRPFYTKACPQDPRFSNSYDFFMR 473

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+ +    + D  E             K  +      ED+LA      P  +G  +G 
Sbjct: 474 GEEIMSGAQRINDIKELEE------SMIAKGLDPKQEGFEDYLAAFRQGCPPHAGGGLGL 527

Query: 327 DRLVMLVTGANNINEVIWTPFS 348
           +R+VM   G  N+      P  
Sbjct: 528 NRIVMFFLGLPNVRLASLFPRD 549


>gi|51892720|ref|YP_075411.1| asparaginyl-tRNA synthetase [Symbiobacterium thermophilum IAM
           14863]
 gi|59798516|sp|Q67P26|SYN_SYMTH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|51856409|dbj|BAD40567.1| asparaginyl-tRNA synthetase [Symbiobacterium thermophilum IAM
           14863]
          Length = 437

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 112/349 (32%), Gaps = 36/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+   L  RN I  ++ ++  EN F+  +S  L  +   E     F 
Sbjct: 115 MDHRHLWIRSN--RQVAILRIRNEITMAIHQFLQENGFVLTESPILMGTAA-EGGATLFE 171

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T  +      +P YL  S +    +  A    +++ F   +R  +     H  EF M+E 
Sbjct: 172 TTYVN----DEPAYLSQSGQLHV-EATAMALGRVYTFGPTFRAEKSKTRRHLIEFWMVEP 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A+ ++E  M+    ++        ++      +     +  E +        Y     
Sbjct: 227 EAAYFTHEDNMRLQEEMVTYVVRRVLERRSKELQLIGRDTTLLEKVEPPFPRITYT---- 282

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                     +   +  +  + G        W + F       +           ++++P
Sbjct: 283 ----------EAVEMLKKLHKPGDEW-EPIEWGEDFGAPHETVL--TQQFEKPVFVEKFP 329

Query: 243 APE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
               +      P +P      +L A     E+      + DP   + RFE+       + 
Sbjct: 330 VKVKAFYMQPDPENPDVVLGADLLAPEGYGEIIGGSQRIHDPELLKRRFEE-----HGLD 384

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             TY    D           SG  +G +R V  + G  ++ E I  P  
Sbjct: 385 MNTYGWYYDLRRF--GSVPHSGFGLGIERTVAWICGLEHVRETIPFPRL 431


>gi|88855926|ref|ZP_01130588.1| aspartyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88814793|gb|EAR24653.1| aspartyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 479

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/337 (19%), Positives = 106/337 (31%), Gaps = 36/337 (10%)

Query: 9   WWNRDFH-YRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI 67
           W   D    R       +  ++ + R Y+VEN FIE+ +  L  S  +E++   F  E  
Sbjct: 162 WRFLDLRVPRNSLIFRIQTTLEHAWRTYWVENDFIEVHTPKLMASA-SESNAELFEVE-- 218

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH 126
              +     YL  SP+F  +   AAG  KIF  A ++R        H  EFTM++   + 
Sbjct: 219 ---YFDTKAYLAQSPQFFKQMAQAAGFGKIFEIAPSFRADPSFTSRHATEFTMVDNEISW 275

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
               + +      +      A ++                     E   +   I+L    
Sbjct: 276 IDSHEDVMKMHEELMVVGFQAVKEK------------------HGEEIEKLFGIELTVPT 317

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
               +             G  V   D   D      I         +    L  Y A   
Sbjct: 318 TPFPRIPLAEAKQIVSDRGYTVPRADADMDPEGERQIAAYVKETYRHDFVFLTDYAASIR 377

Query: 247 -ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                 +  D   T  ++L    +E+                   E Q + K  +    +
Sbjct: 378 PFYHMRHADDAELTNSYDLVYNGVEISTGAQREHRVDVL------EAQIRAKGMDPA-EL 430

Query: 306 DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
           D  +L      +P   G  MG  R++ML+ G  N+ E
Sbjct: 431 D-FYLDFFRYGVPPHGGFGMGLGRVLMLMLGLPNLRE 466


>gi|160879288|ref|YP_001558256.1| tRNA synthetase class II (D K and N) [Clostridium phytofermentans
           ISDg]
 gi|160427954|gb|ABX41517.1| tRNA synthetase class II (D K and N) [Clostridium phytofermentans
           ISDg]
          Length = 441

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 112/339 (33%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  I    R++  E +F EI S   +Q       +I          ++ 
Sbjct: 133 RNERERAIFKLQEGIAGGFRKFLAEQKFTEIHSPKIVQMGAEGGANI-------FSLNYF 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQ 131
            K  YL  SP+F  +  +    E+++  A  +R  +     H  E+T +++   +    +
Sbjct: 186 GKEAYLAQSPQFYKQM-MVGVFERVYEIAPVFRAEKHDTSRHLNEYTSVDFEMGYIESFE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +    + +  A     ++ +  +                       NI L    + P  
Sbjct: 245 EIMQMESCMLKATLSYLKEYYQKELF-------------------LLNISLPVIEEIPTI 285

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  L A++    +     +     ++L E IE   G      +  YP+ +     +
Sbjct: 286 RFNEAKELVAKEYNRTICDMSDFEPEEEKLLCEIIERTTGSE-FVFVTHYPSSKRPFYAM 344

Query: 252 -YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             P +   T  F+L    +E+      + D  EQ  +       K+ +  E +     +L
Sbjct: 345 EDPKNTEETLSFDLLFRGLEITTGGQRIHDFKEQVDKL-----LKRGMNVEDFQ---SYL 396

Query: 311 AC-LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G+ +G +R    +   NN+      P  
Sbjct: 397 MMHRYGMPPHGGLGLGLERFTSKLCNQNNVRYATLFPRD 435


>gi|297566296|ref|YP_003685268.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850745|gb|ADH63760.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 423

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/342 (15%), Positives = 107/342 (31%), Gaps = 44/342 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              + R  L  +  +    R Y     F EI +  +  +     +++          D+ 
Sbjct: 119 RGEKARAALQVQAALVRGFRNYLDAQGFTEIYTPKIVSAGAEGGSNL-------FGIDYF 171

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYE 130
            K  YL  SP+   K+++    E+++  A  +R  E     H  E+  L+          
Sbjct: 172 EKRAYLAQSPQLY-KQIMVGVYERVYEVAPVFRAEEHATSRHLNEYLSLDVEMGFIQDEF 230

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++    N++R   E A         +                      ++   T + P 
Sbjct: 231 EVIDLEENLLRAMLEEARHTTPKQLAM--------------------LEVEWPNTQEMPR 270

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                   +  ++  + V  D    +   R L    +   G++    + +YP        
Sbjct: 271 LSHAEARRILREELSMPVGQDFN--EEAERALGAYAKEKWGVD-FLFVTKYPQVARPFYA 327

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             P     T+ F+L    +E+ +    +     Q     ++   + K  +        +L
Sbjct: 328 Y-PEGNGVTRGFDLLFRGLEITSGGQRVH----QYEVLIEQ--LRNKGNDPANF--AGYL 378

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                 MP   G A+G +RL   + G  N+      P  +  
Sbjct: 379 EVFKYGMPPHGGFAIGAERLTQKLLGLPNVRYARAFPRDRHR 420


>gi|11691631|emb|CAC18673.1| putative Lysyl-tRNA synthetase [Erwinia chrysanthemi]
          Length = 137

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 1/135 (0%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +   +    +EP++G +    +  +PA ++ALA I   D R  +RFE+Y   IEL N   
Sbjct: 3   LLQLLFAFGVEPHIGRDKPAFVYHFPATQAALAEISTEDHRVAERFEVYYKGIELANGFC 62

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           EL D  EQR RFE++ +++        PIDE+ LA L   +P  SG+A+G DRLVM+   
Sbjct: 63  ELTDSKEQRQRFEQDNRKRAARGLPVQPIDENLLAALEAGIPPCSGVALGVDRLVMMALN 122

Query: 336 ANNINEVIWTPFSQS 350
           A +I EV+     ++
Sbjct: 123 AESIGEVMAFTVDRA 137


>gi|322493438|emb|CBZ28725.1| putative aspartyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 550

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 120/349 (34%), Gaps = 35/349 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
                ++ +    R++ ++N F EI S  +  +P +E     F  E     +  +  YL 
Sbjct: 211 AIFRLQSRVCQYFRQFLIDNDFFEIHSPKIINAP-SEGGANVFKLE-----YFNRFAYLA 264

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            SP+   + +L     ++F     +R+       H  EF  L+     + +   + D   
Sbjct: 265 QSPQLYKQMVLQGDVPRVFEVGPVFRSENSNTHRHLTEFVGLDVEMRIDEHYYEVLDVAE 324

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
            +            + +  +       E +    A  +   + +G   +  +  D+    
Sbjct: 325 SLFNYIFEHLATH-TKELTSVCQQYPFEPLVWKLAPEKMKELGVGVISEGVEPTDKFQAR 383

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC-----------------CTILDRY 241
           +Q   + +   +     ++ + +L EK+ P   IN                    I DR+
Sbjct: 384 VQNMDSRMLRINYMHCIELLNTVLDEKMAPTDDINTTNEKLLGKLVKERYGTDFFISDRF 443

Query: 242 PAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P+       +    D RFT  ++++    E+ +    + DP     R        K +  
Sbjct: 444 PSSVRPFYTMECKDDVRFTNSYDMFIRGEEISSGAQRIHDPDLLLAR-------AKMLNV 496

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  PI E ++           G  +G +R+VML  G +N+      P  
Sbjct: 497 DLTPIKE-YVDSFRLGAWPHGGFGVGLERVVMLYLGLSNVRLASLFPRD 544


>gi|117619714|ref|YP_856024.1| asparaginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166231656|sp|A0KIC3|SYN_AERHH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|117561121|gb|ABK38069.1| asparaginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 466

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 108/357 (30%), Gaps = 45/357 (12%)

Query: 15  HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI--------- 59
           H R R  +       RN +  ++  +F E  ++ I +  +  S       +         
Sbjct: 126 HLRARTNMVGAVTRVRNCLSQAIHRFFHEQGYLWIAAPLITASDTEGAGEMFRVSTLDME 185

Query: 60  RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQ 114
               T     D+      K  +L  S + + +    A   K++ F   +R        H 
Sbjct: 186 NLPRTPAGKVDYDKDFFGKETFLTVSGQLNVETYACA-LSKVYTFGPTFRAENSNTSRHL 244

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A    E        +++        +    +  +   F++          
Sbjct: 245 AEFWMVEPEVAFADLEDNAALAEAMLKYVFNAVLAE----RRDDLEFFAQHVDKDAIGRL 300

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R+   D         Q D        +  G +     +W    S      +      + 
Sbjct: 301 ERFVASDFA-------QIDYTDAIEVLKNCGKKFEFPVSWGIDLSSEHERYLAEEHFKSP 353

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEMQ 293
             +   YP    A       D +             L     E++   ++  R +  + +
Sbjct: 354 VVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDAR 406

Query: 294 EKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +   N+    D  +   L        SG  +GF+RLV+ VTG  N+ +VI  P +
Sbjct: 407 LAEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLVVYVTGMGNVRDVIPFPRT 460


>gi|332830421|gb|EGK03049.1| asparaginyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 465

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/361 (13%), Positives = 104/361 (28%), Gaps = 51/361 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            + R R          R+ +  ++ +YF +  F    +  +  S       +  F    +
Sbjct: 124 AYLRPRTNTFGAIFRIRHHMSYAIHKYFNDKGFFYFHTPIVTASDAEGAGSM--FQVTTL 181

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +             +  +     L  S +    +L A     I+ F   +R       
Sbjct: 182 DFNNVPRAEGGQVDYTEDFFGRQTNLTVSGQL-EGELGAMALGAIYTFGPTFRAENSNTP 240

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A       M    + ++     A +            F +       
Sbjct: 241 RHLAEFWMIEPEVAFYDIHDNMDLAEDFLKYLIRYALEHCKDDIAFLNEMFDK------- 293

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E   R   +      ++  +          +++G +      W           +     
Sbjct: 294 ELIERLNFV----IANDFVRLTYTEGVQILEKSGHKFEFPVYWGADLQSEHERYLVEKH- 348

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                IL  YP    +       D +  +  ++    I E+    +   D  +  +R ++
Sbjct: 349 FKRPVILTDYPKEIKSFYMKQNEDGKTVRGMDVLFPKIGEIIGGSEREADYDKLVNRTKE 408

Query: 291 EMQEKKKIYNETYPID--EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                          D    ++          +G  +GF+RL++ +TG  NI +VI  P 
Sbjct: 409 LN----------MNTDPIWWYMETRKFGTAPHAGFGLGFERLILFITGMANIRDVIPFPR 458

Query: 348 S 348
           +
Sbjct: 459 T 459


>gi|121586541|ref|ZP_01676327.1| asparaginyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121730129|ref|ZP_01682527.1| asparaginyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147673141|ref|YP_001216861.1| asparaginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153820100|ref|ZP_01972767.1| asparaginyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153823531|ref|ZP_01976198.1| asparaginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|153830039|ref|ZP_01982706.1| asparaginyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|227081468|ref|YP_002810019.1| asparaginyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|254286606|ref|ZP_04961562.1| asparaginyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|254848419|ref|ZP_05237769.1| asparaginyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|298498613|ref|ZP_07008420.1| asparaginyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|9655785|gb|AAF94456.1| asparaginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121549220|gb|EAX59252.1| asparaginyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121628120|gb|EAX60655.1| asparaginyl-tRNA synthetase [Vibrio cholerae V52]
 gi|126509352|gb|EAZ71946.1| asparaginyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126518955|gb|EAZ76178.1| asparaginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|146315024|gb|ABQ19563.1| asparaginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|148874479|gb|EDL72614.1| asparaginyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|150423364|gb|EDN15309.1| asparaginyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|227009356|gb|ACP05568.1| asparaginyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227013214|gb|ACP09424.1| asparaginyl-tRNA synthetase [Vibrio cholerae O395]
 gi|254844124|gb|EET22538.1| asparaginyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|297542946|gb|EFH78996.1| asparaginyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 481

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 107/360 (29%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 140 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 197

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  +L  S + + +    A   K++ F   +R       
Sbjct: 198 DMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAIS-KVYTFGPTFRAENSNTS 256

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +    +  +   F++     V 
Sbjct: 257 RHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVI 312

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++   D           D        +  G        W    +      +     
Sbjct: 313 ARLEQFVESDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 365

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 366 KAPVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 418

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 419 DARMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 475


>gi|54020192|ref|YP_115926.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|59798498|sp|Q600N9|SYN_MYCH2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|53987365|gb|AAV27566.1| asparagine--tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 449

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/352 (18%), Positives = 119/352 (33%), Gaps = 30/352 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           + Q+P   + +R   +R    +  R+ +   + ++F    FI   +  L  +   E    
Sbjct: 118 LRQMP--HFRHRSRLFRV--IMKLRSALFFEIHKFFRRQGFINFSAPILTSND-GEGAGE 172

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F  +   +D   K   L  + +   +       +K++ FA  +R        H  EF M
Sbjct: 173 VFIVDDENKDFFNKKTTLGVTGQLHAEAYALG-FKKVYTFAPTFRAERSNTRRHAAEFWM 231

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   A  +          II  A ++  + I S    N + F   E         R   
Sbjct: 232 IEPEVAFFT-------LEQIIELAVKLLQKVIKSVIIRNKDEFIFLEKAGDKNLRKRLLQ 284

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                      +    LL    ++       D  +           +   +      ++ 
Sbjct: 285 FCDSQVTQISYEKAIELLLEHQEKFE---EKDLFFGCDLKTEHERFLTEEIFHMPV-VII 340

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            YP    A       D +    F+L    I       EL+   ++  R+E   +   ++ 
Sbjct: 341 NYPKNLKAFYMHQNEDGQTVAAFDLLVPGI------GELIGGSQREVRYE---KLLARMN 391

Query: 300 NETYPIDED--FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                I+E   +L       P SSG  +GF+RL+M +TG  NI +VI  P +
Sbjct: 392 ELNMNIEEFQWYLDLRKYGNPGSSGFGLGFERLLMYITGIENIRDVIPFPRT 443


>gi|52143256|ref|YP_083573.1| aspartyl-tRNA synthetase [Bacillus cereus E33L]
 gi|51976725|gb|AAU18275.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 432

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 108/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++    S  E+  EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTAAIFKVKSTFVHSFSEFLTENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+   +    + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELSFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQEILKSKYCKESPVGDLDTEG-EKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K K  +      + +L
Sbjct: 336 PNNENSSITDSFDLLYKGLEITSGAQRIHNYEMLLDSF------KGKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|54309502|ref|YP_130522.1| asparaginyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|59798540|sp|Q6LPQ6|SYN_PHOPR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46913938|emb|CAG20720.1| putative asparaginyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 466

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------- 58
            H R R  +       RN +  ++  ++ E  F  + +  +  S      E         
Sbjct: 125 AHLRPRTNIIGAVARVRNCLSQAIHRFYHEQGFFWMSAPLITASDCEGAGEMFRVSTLDM 184

Query: 59  IRAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T+    D+      K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ANVPMTDAGEVDYDKDFFGKETFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +   K   ++++   +   ++            ++ E IT  E 
Sbjct: 244 LAEFWMVEPEVAFADLDDAAKLAEDMLKYVFKAVLEERRDDLEFFAQRINK-EAITRLEQ 302

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F             +  Q D        Q +G +   D  W    S      +       
Sbjct: 303 F----------VTSDFAQVDYTDAIQILQDSGRKFEFDVEWGIDMSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLEHLDK 405

Query: 294 EKKKIYNETYPIDEDF--LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++  +   I E +  L         SG  +GF+RLV  VTG  NI +VI  P 
Sbjct: 406 RIAEMGIDASHI-EWYRDLR-RYGTVPHSGFGLGFERLVTYVTGMQNIRDVIPFPR 459


>gi|262402352|ref|ZP_06078913.1| asparaginyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351134|gb|EEZ00267.1| asparaginyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 466

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 108/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAIS-KVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +    +  +   F++     V 
Sbjct: 242 RHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVI 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++ + D           D        +  G        W    +      +     
Sbjct: 298 ARLEQFVDSDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DARMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|145352373|ref|XP_001420524.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580758|gb|ABO98817.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 491

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/332 (16%), Positives = 103/332 (31%), Gaps = 32/332 (9%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
                ++ + +  RE  +   F EI +  L  +  +E     F  + +       P  L 
Sbjct: 183 AIFKIQSGVGTLFREALLRRNFTEIHTPKLI-AGASEGGAAVFKLDYMQVG----PACLA 237

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            SP+   +  +    E +F     +R  +     H  EFT L+     + +   + D ++
Sbjct: 238 QSPQLYKQMAIMGDLEGVFEIGPVFRAEDSNTHRHLCEFTGLDMEMTIKEHYDEVLDVLD 297

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
            +  +      + F  +    N     E +       R                      
Sbjct: 298 ELFVSMFDGLNERFKREIGVVNEQHPFEPLQYCRPSLRLT---------------FEEGV 342

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPADPR 257
              Q+AG  V           R+L   ++   G +   +L RYP           P DP 
Sbjct: 343 KMLQEAGEEVDPLGDIGTETERVLGRLVKEKYGTD-FYMLTRYPLNARPFYTMPAPDDPN 401

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
           +T  F+++    E+ +    + DP     R        +    E   I + ++       
Sbjct: 402 YTNSFDIFIRGQEIISGAQRIHDPKLLAER-------AEACGIELPTI-QPYIDSFKYGA 453

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               G  +G +R+ ML     NI +    P  
Sbjct: 454 MPHGGCGVGLERVAMLFLNLPNIRKTSMFPRD 485


>gi|145299800|ref|YP_001142641.1| asparaginyl-tRNA synthetase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142852572|gb|ABO90893.1| asparaginyl-tRNA synthetase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 481

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/358 (15%), Positives = 109/358 (30%), Gaps = 43/358 (12%)

Query: 13  DFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R  +       RN +  ++  +F E  ++ I +  +  S       +   ST  
Sbjct: 139 QAHLRPRTNIVGAVTRVRNCLAQAIHRFFHEEGYLWIAAPLITASDTEGAGEMFRVSTLD 198

Query: 67  IIQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
           +               D   K  +L  S + + +    A   K++ F   +R        
Sbjct: 199 LENLPRTDAGKVDYDKDFFGKETFLTVSGQLNVETYACA-LSKVYTFGPTFRAENSNTSR 257

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A  + +        +++        +    +  +   F++        
Sbjct: 258 HLAEFWMVEPEIAFANLDDNAALAEAMLKYVFNAVLAE----RRDDLEFFAQHVDKDAIG 313

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              R+ + D         Q D        +  G +     +W    S      +      
Sbjct: 314 RLERFVSSDFA-------QIDYTDAIEVLKNCGKKFEFPVSWGIDLSSEHERYLAEEHFK 366

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
           +   +   YP    A       D +             L     E++   ++  R E   
Sbjct: 367 SPVVVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGAQREERLEVLD 419

Query: 293 QEKKKIYNETYPIDEDFLACLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           Q   ++       D  +   L        +G  +GF+RLV+ VTG  N+ +VI  P +
Sbjct: 420 QRMAEMGL--NKEDYWWYRDLRRFGTVPHAGFGLGFERLVVYVTGMGNVRDVIPFPRT 475


>gi|229529622|ref|ZP_04419012.1| asparaginyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229333396|gb|EEN98882.1| asparaginyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|327483982|gb|AEA78389.1| Asparaginyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 466

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 108/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAIS-KVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +    +  +   F++     V 
Sbjct: 242 RHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVI 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++ + D           D        +  G        W    +      +     
Sbjct: 298 ARLEQFVDSDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DARMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|304415263|ref|ZP_07395960.1| asparaginyl tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304282889|gb|EFL91355.1| asparaginyl tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 446

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 107/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  +  + +  +  S       +   ST   
Sbjct: 105 AHLRPRTHLISAVARVRHTLAQAIHRFFHEKGYFWLSTPLITASDTEGAGEMFRVSTLDL 164

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 165 ENLPRTENGKIDFDKDFFGKEAFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTSRH 223

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + +      +++   +       + +  +   F+E    TV   
Sbjct: 224 LAEFWMVEPEVAFADLDDVAGLAEEMLKYLFKAV----LNERADDLAFFAERIDKTVITR 279

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + + D           D        Q++     +  TW    S      +       
Sbjct: 280 LQDFISKDFAQV-------DYTDAIKILQESKQFFENRVTWGIDLSSEHERYLAEEHFKA 332

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R E  + 
Sbjct: 333 PVVVK-NYPKEIKAFYMRLNDDKKTVAAM------DVLAPGIGEIIGGAQREERLEVLDA 385

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +       +   +    L         +G  +GF+RL+  VTG  N+ ++I  P +
Sbjct: 386 RLTAMGLKKEDYVWYRDLR-RYGTVPHAGFGLGFERLIAYVTGMTNVRDLIPFPRT 440


>gi|56758450|gb|AAW27365.1| SJCHGC03318 protein [Schistosoma japonicum]
          Length = 185

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAM 324
             + ELCNA  EL DP+ QR RF ++ ++K     E    DE FL  L   +P ++G  +
Sbjct: 1   MLHKELCNAYTELNDPVIQRERFMEQAKDKAAGDTEAMVTDEQFLTALGYGLPPTAGWGL 60

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSN 351
           G DRL M +T  NNI EVI  P  +  
Sbjct: 61  GIDRLTMFLTNTNNIKEVILFPAMKPE 87


>gi|149910091|ref|ZP_01898738.1| asparaginyl-tRNA synthetase [Moritella sp. PE36]
 gi|149806816|gb|EDM66778.1| asparaginyl-tRNA synthetase [Moritella sp. PE36]
          Length = 466

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 108/359 (30%), Gaps = 47/359 (13%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R       +  RN +  ++  ++ EN +  + +  +  S       +  F    
Sbjct: 124 HAHLRGRTNVMGAVMRVRNCLSQAIHRFYHENGYNWLSTPIITASDCEGAGEM--FRVST 181

Query: 67  IIQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
           +  +                  K  +L  S + + +    A   K++ F   +R      
Sbjct: 182 LDMNNLPLTDKGEVDYNQDFFGKEAFLTVSGQLNAETYACA-IGKVYTFGPTFRAENSNT 240

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF M+E   A    +   K   ++++   +   ++    +  +   F++      
Sbjct: 241 TRHLAEFWMVEPEIAFADLDDAAKLAEDMLKYCFKAVLEE----RMDDMQFFAQRIDKDA 296

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                 + + D         Q D        ++ G       +W    S      +    
Sbjct: 297 ITRLESFVDSDFA-------QIDYTDAIKILEECGKEFEFPVSWGIDMSSEHERYLAEVH 349

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                 +   YP    +       D +             L     E++   ++  R + 
Sbjct: 350 FKAPVVVK-NYPKDIKSFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDM 402

Query: 291 EMQEKKKIYNETYPIDEDFLACLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +  +++       D  +   L        SG  +GF+RLV  VTG  NI +VI  P 
Sbjct: 403 LDKRMEEMGL--NKEDYWWYRDLRRFGTVPHSGFGLGFERLVSYVTGMQNIRDVIPYPR 459


>gi|261210976|ref|ZP_05925266.1| asparaginyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260839951|gb|EEX66551.1| asparaginyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 466

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 108/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAIS-KVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +    +  +   F++     V 
Sbjct: 242 RHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVI 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++ + D           D        +  G        W    +      +     
Sbjct: 298 ARLEQFVDSDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DARMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|261203891|ref|XP_002629159.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239586944|gb|EEQ69587.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 558

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 99/326 (30%), Gaps = 24/326 (7%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           + +     EY +++    I +  L  +  +E     F        + +K  YL  SP+  
Sbjct: 248 SGVAQLFTEYMLKSGSRWISTPKLTGNA-SEGGAGVFEVT-----YFKKKAYLAQSPQLY 301

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
            +  +A     +F     +R  E     H  EF  L++ +  +S+   + +    +    
Sbjct: 302 KQMCIAGDLGSVFEVGPVFRAEESNTHRHLTEFIGLDFEKTFQSHYHEVLEFAEDLLVFI 361

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
               ++ F  +                    +   +     +    +    +   +  + 
Sbjct: 362 LSQLKERFKKEIEVIQRSYPKAGDFKLPKDGKALRLKYMEGVALLKEAGVDVTEQEKFEN 421

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFE 263
            +  A +     I                   +LD++P           P DP F+  ++
Sbjct: 422 DLTTAMEKQLGRIIREKYD---------TDFYVLDKFPMAVRPFYTKPCPDDPTFSNSYD 472

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
            +    E+ +    + +  E       E     K  +      ED++       P  +G 
Sbjct: 473 FFMRGEEIMSGAQRINEAKEL------EAAMTAKGLDPNGEGFEDYIGAFRQGCPPHAGG 526

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFS 348
            +G +R+VM   G  NI      P  
Sbjct: 527 GLGLNRIVMFFLGLPNIRLATLFPRD 552


>gi|213026923|ref|ZP_03341370.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 153

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 1/141 (0%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           ++    +   +    +EP++G    T +  +PA +++LA I   D R  +RFE+Y   IE
Sbjct: 13  EEDRDTLLQLLFTMGVEPHIGKEKPTFIYHFPASQASLAQISTEDHRVAERFEVYYKGIE 72

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           L N   EL D  EQ+ RFE++ +++        PID++ L  L   +P  SG+A+G DRL
Sbjct: 73  LANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAAGLPDCSGVALGVDRL 132

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           VML  GA ++ +VI     ++
Sbjct: 133 VMLALGAESLADVIAFTVDRA 153


>gi|228914794|ref|ZP_04078403.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|301053717|ref|YP_003791928.1| aspartyl-tRNA synthetase [Bacillus anthracis CI]
 gi|228845113|gb|EEM90155.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|300375886|gb|ADK04790.1| aspartyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 432

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQEILKSKYCKESPVGDLDTEG-EKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNNENSAITDSFDLLYKGLEITSGAQRIHNYEMLLASF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|302191306|ref|ZP_07267560.1| asparaginyl-tRNA synthetase [Lactobacillus iners AB-1]
          Length = 432

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 110/348 (31%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN+   ++ +YF +N FI+ D+  L   +P         
Sbjct: 116 LDHRHLWLRSK--RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++     YL  S +    ++ A    KIF F   +R  E     H  EF M+E
Sbjct: 167 TTELFHIEYFNSDAYLSQSGQLY-GEVGAHAFSKIFTFGPTFRAEESKTRRHLTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ ++    +++                    F     +   E        D
Sbjct: 226 PEMAWMHQDESLEIQEGLLK--------------------FVTKRILDNCEYELSILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y +A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFARLSYDEAVKMLQDAGRDFKWGDDFGAPDEAFISEQY--DRPVFILNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            +       E    ++       E++   E+   ++    + ++   +
Sbjct: 324 PTAIKPFYMKKNPEN----PLEYLCADVLAPEGYGEIIGGSEREEDYDTLKAQIEEAGLD 379

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          SG  +GF+R +  +   ++I E I  P  
Sbjct: 380 LKDY-EWYLDLRKYGSVPHSGFGIGFERFLGWICKLDHIREAIPFPRL 426


>gi|225864167|ref|YP_002749545.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|225786637|gb|ACO26854.1| aspartate--tRNA ligase [Bacillus cereus 03BB102]
          Length = 432

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQEILKSKYCKESPVGDLDTEG-EKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNNENSSITDSFDLLYKGLEITSGAQRIHNYEMLLASF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|213964227|ref|ZP_03392460.1| asparaginyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953117|gb|EEB64466.1| asparaginyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 476

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 121/376 (32%), Gaps = 42/376 (11%)

Query: 5   PSQP---WWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +   + H R R       +  R+ +  ++ +YF +N F  +++  +  S    
Sbjct: 105 PKKHSLEFLRENAHLRVRSNTFSAVMRVRSTLAFAIHKYFQDNGFFYVNTPIITGSDAEG 164

Query: 56  ETHI---------RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
              +             TE    D+      +   L  S +    +  A    KI+ F  
Sbjct: 165 AGEMFRVTTLDAKNPPLTENGEVDYKKDFFGRETNLTVSGQL-EGETFAMALGKIYTFGP 223

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A       M    + I+   +   +            
Sbjct: 224 TFRAENSNTSRHLAEFWMIEPEMAFYDLIDNMDLAEDFIKYVLKYTLEVRRDDLEFLDKR 283

Query: 162 FSEPEYITVAEAFA--------RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
           F E E        +         +   +    +   +  D        ++   +   ++ 
Sbjct: 284 FLEEEKTKPQNERSSMSLIEKLEFVIHNEFKRVSYTEAIDILKNSNHNKKKKFQYPVNEW 343

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
             D+ S      +E +    C  IL  YPA   A       D +  +  ++    I    
Sbjct: 344 GVDLQSEHERYLVEKH--FECPVILYDYPANIKAFYMRLNDDGKTVRAMDILFPGI---- 397

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              E++   ++  R++   Q+   +  +   +   +L          SG  +GF+RLV+ 
Sbjct: 398 --GEIVGGSQREERYDVLKQKIADLNMDEQTL-WWYLDLRKFGTAVHSGFGLGFERLVLF 454

Query: 333 VTGANNINEVIWTPFS 348
            TG  NI +VI  P +
Sbjct: 455 ATGMTNIRDVIPYPRT 470


>gi|90414515|ref|ZP_01222490.1| asparaginyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90324423|gb|EAS40985.1| asparaginyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 466

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 110/356 (30%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------- 58
            H R R  +       RN +  ++  ++ E  F  + +  +  S      E         
Sbjct: 125 AHLRPRTNMIGAVARVRNCLSQAIHRFYHEQGFFWMSAPLITASDCEGAGEMFRVSTLDM 184

Query: 59  IRAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T+    D+      K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ANVPMTDAGEVDYDKDFFGKETFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +   K   ++++   +   ++            ++ E IT  E 
Sbjct: 244 LAEFWMVEPEVAFADLDDAAKLAEDMLKYVFKAVLEERRDDLEFFAQRINK-EAITRLEQ 302

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F             +  Q D        Q +G +   D  W    S      +       
Sbjct: 303 F----------VDSDFAQVDYTDAIQILQDSGRKFEFDVEWGIDMSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R E   +
Sbjct: 353 PVVVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLELLDK 405

Query: 294 EKKKIYNETYPIDEDF--LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++  +   I E +  L         SG  +GF+RLV  VTG  NI +VI  P 
Sbjct: 406 RIAEMGIDASHI-EWYRDLR-RYGTVPHSGFGLGFERLVTYVTGMQNIRDVIPFPR 459


>gi|146093564|ref|XP_001466893.1| aspartyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134071257|emb|CAM69942.1| putative aspartyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|322500992|emb|CBZ36069.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 550

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 118/349 (33%), Gaps = 35/349 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
                ++ +    R++ ++N F EI S  +  +P +E     F  E     +  +  YL 
Sbjct: 211 AIFRLQSRVCQYFRQFLIDNDFCEIHSPKIINAP-SEGGANVFKLE-----YFNRFAYLA 264

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            SP+   + +L     ++F     +R+       H  EF  L+     + +   + D   
Sbjct: 265 QSPQLYKQMVLQGDVPRVFEVGPVFRSENSNTHRHLTEFVGLDVEMRIDEHYYEVLDVAE 324

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
            +            + +  N       E +       +   + +G   +N    D+    
Sbjct: 325 SLFNYIFEHLATH-TKELKNVCQQYPFEPLVWKLTPEKMKELGVGVISENVVPTDKFQAR 383

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC-----------------CTILDRY 241
           +    + +   +     ++ + +L EK+ P   IN                    I DR+
Sbjct: 384 VHNMDSRMLRINYMHCIELLNTVLDEKMAPTDDINTTNEKLLGKLVKERYGTDFFISDRF 443

Query: 242 PAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P+       +    D RFT  ++++    E+ +    + DP     R        K +  
Sbjct: 444 PSSVRPFYTMECKDDVRFTNSYDMFIRGEEISSGAQRIHDPDLLLAR-------AKMLNV 496

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  PI E ++           G  +G +R+VML  G +N+      P  
Sbjct: 497 DLTPIKE-YVDSFRLGAWPHGGFGVGLERVVMLYLGLSNVRLASLFPRD 544


>gi|229091180|ref|ZP_04222403.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228692311|gb|EEL46047.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 432

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTMAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQEILKSKYCKESPVGDLDTEG-EKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNNENSSITDSFDLLYKGLEITSGAQRIHNYEMLLDSF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|67536760|ref|XP_662154.1| hypothetical protein AN4550.2 [Aspergillus nidulans FGSC A4]
 gi|40741703|gb|EAA60893.1| hypothetical protein AN4550.2 [Aspergillus nidulans FGSC A4]
 gi|259482620|tpe|CBF77275.1| TPA: aspartyl-tRNA synthetase Dps1, putative (AFU_orthologue;
           AFUA_2G02590) [Aspergillus nidulans FGSC A4]
          Length = 555

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/322 (17%), Positives = 109/322 (33%), Gaps = 32/322 (9%)

Query: 34  EYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
           EY +++    I +  L  +   E     F  +   ++      YL  SP+   +  +A  
Sbjct: 253 EYMIKSGSRWISTPKLVGAA-TEGGSGVFEVKYFKRNA-----YLAQSPQLYKQMCIAGD 306

Query: 94  EEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
            + +F  A  +R  E     H  EFT L++ +   S+   + +    +        ++ +
Sbjct: 307 MQSVFEIAPVFRAEESNTHRHLTEFTGLDFEKTFSSHYHEVLEFAEQLLVFILSQLKERY 366

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
           + Q                      A            + +        ++AG+ V+  +
Sbjct: 367 ADQIAIIQKSYP------------KAGDFKLPKDGKALRLNYMDGVALLKEAGVDVSEQE 414

Query: 213 TWSDIF----SRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYAC 267
            + + F     + L + I      +   +LD++P           P DPRF+  ++ +  
Sbjct: 415 RFENDFTTAMEKQLGQIIREKYDTD-FYVLDKFPMAVRPFYTKACPQDPRFSNSYDFFMR 473

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+ +    + D  E       E     K  N      ED+LA      P  +G  +G 
Sbjct: 474 GEEIMSGAQRIHDVKEL------EASMIAKGVNPNQEGFEDYLAAFRQGCPPHAGGGLGL 527

Query: 327 DRLVMLVTGANNINEVIWTPFS 348
           +R+VM   G  NI      P  
Sbjct: 528 NRIVMFFLGLPNIRLATLFPRD 549


>gi|300118068|ref|ZP_07055816.1| aspartyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298724379|gb|EFI65073.1| aspartyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 432

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQEILKSKYCKESPVGDLDTEG-EKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNNENSSITDSFDLLYKGLEITSGAQRIHNYEMLLDSF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|199598398|ref|ZP_03211817.1| Aspartyl/asparaginyl-tRNA synthetase [Lactobacillus rhamnosus
           HN001]
 gi|258508486|ref|YP_003171237.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|199590717|gb|EDY98804.1| Aspartyl/asparaginyl-tRNA synthetase [Lactobacillus rhamnosus
           HN001]
 gi|257148413|emb|CAR87386.1| Asparaginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649796|dbj|BAI41958.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 432

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+      RN +  +  E+F    FI++D   L   +P         
Sbjct: 116 LDHRHLWLRSK--RQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  K  YL  S +   +    A   K+F     +R  +     H  EF M+E
Sbjct: 167 TTELFETDYFDKKAYLSQSGQLYAEAGAMAY-GKVFTCGPVFRAEKSKTRRHLTEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ +K     +    +                      +            D
Sbjct: 226 PEMAFCHQEESLKVQERYVAYMVQAV--------------------LDNCAYPLHLLGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                     P   + Y +A +       D  + D F       +      +    +  Y
Sbjct: 266 PEVLKKYTKLPYPRISYKKAIEMLQAAGMDVKYGDDFGSPEETYLSDQ--FDQPVFVLNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE--MQEKKKIY 299
           P        +   +       +    ++       E++   E+   ++K     EK  + 
Sbjct: 324 PKAIKPFYMLTDPEDEQ----QYVCADMLAPEGYGEIIGGSERETDYDKLKAAIEKAGLD 379

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + Y   E +L          SG  +G +R +  +   +++ E I  P  
Sbjct: 380 LDEY---EWYLDLRKYGSVPHSGFGLGLERAITWICKLDHLREAIPFPRM 426


>gi|229552288|ref|ZP_04441013.1| asparagine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539697|ref|YP_003174196.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314360|gb|EEN80333.1| asparagine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151373|emb|CAR90345.1| Asparaginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 432

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+      RN +  +  E+F    FI++D   L   +P         
Sbjct: 116 LDHRHLWLRSK--RQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  K  YL  S +   +    A   K+F     +R  +     H  EF M+E
Sbjct: 167 TTELFETDYFDKKAYLSQSGQLYAEAGAMAY-GKVFTCGPVFRAEKSKTRRHLTEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ +K     +    +                      +            D
Sbjct: 226 PEMAFCHQEESLKVQERYVAYMVQAV--------------------LDNCAYPLHLLGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                     P   + Y +A +       D  + D F       +      +    +  Y
Sbjct: 266 PEVLKQYTKLPYPRISYKKAIEMLQAAGMDVKYGDDFGSPEETYLSDQ--FDQPVFVLNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE--MQEKKKIY 299
           P        +   +       +    ++       E++   E+   ++K     EK  + 
Sbjct: 324 PKAIKPFYMLTDPEDEQ----QYVCADMLAPEGYGEIIGGSERETDYDKLKAAIEKAGLD 379

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + Y   E +L          SG  +G +R +  +   +++ E I  P  
Sbjct: 380 LDEY---EWYLDLRKYGSVPHSGFGLGLERAITWICKLDHLREAIPFPRM 426


>gi|259500617|ref|ZP_05743519.1| asparagine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|259168001|gb|EEW52496.1| asparagine-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 433

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 110/348 (31%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN+   ++ +YF +N FI+ D+  L   +P         
Sbjct: 117 LDHRHLWLRSK--RPFAIMKIRNVAFKAIVDYFEDNGFIKFDAPILMHSAPEG------- 167

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++     YL  S +    ++ A    KIF F   +R  E     H  EF M+E
Sbjct: 168 TTELFHIEYFNSDAYLSQSGQLY-GEVGAHAFSKIFTFGPTFRAEESKTRRHLTEFWMME 226

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ ++    +++                    F     +   E        D
Sbjct: 227 PEMAWMHQDESLEIQEGLLK--------------------FVTKRILDNCEYELSILGRD 266

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y +A +       D  W D F       I      +    +  Y
Sbjct: 267 PEKLRPTTEGNFARLSYDEAVKMLQDAGRDFKWGDDFGAPDEAFISEQY--DRPVFILNY 324

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            +       E    ++       E++   E+   ++    + ++   +
Sbjct: 325 PTAIKPFYMKKNPEN----PLEYLCADVLAPEGYGEIIGGSEREEDYDTLKAQIEEAGLD 380

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                E +L          SG  +GF+R +  +   ++I E I  P  
Sbjct: 381 LKDY-EWYLDLRKYGSVPHSGFGIGFERFLGWICKLDHIREAIPFPRL 427


>gi|218199619|gb|EEC82046.1| hypothetical protein OsI_26023 [Oryza sativa Indica Group]
          Length = 377

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 59/369 (15%), Positives = 105/369 (28%), Gaps = 57/369 (15%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R R          RN +  +  ++F +N F+ + S  +  S       + + T LI 
Sbjct: 26  AHLRPRTNTFGAVARVRNALAYATHKFFQDNGFVWVASPIITASDCEGAGEQFYVTTLIS 85

Query: 69  QDHIR-----------------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                                       KP +L  S + + +    A    ++ F   +R
Sbjct: 86  NSAEGGSLVKDIPSTKDGRVDWSQDFFCKPAFLTVSGQLNGETYATA-LSDVYTFGPTFR 144

Query: 106 NGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                   H  EF M+E   A       M    + ++   +   +               
Sbjct: 145 AENSNTSRHLAEFWMIEPELAFADLNDDMACASSYLQYVVKYVLENCK------------ 192

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI----RVAHDDTWSDIFSR 220
            E +     +     ID     D  ++   HL Y  A +  +    +      W      
Sbjct: 193 -EDMDFFNTWIEKGIIDRLN--DVVEKNFVHLSYSDAIELLVGSKKKFEFPVKWGLDLQS 249

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
                I          I+  YP    A       D +     +L    +       EL+ 
Sbjct: 250 EHERYITEVAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDLLVPRV------GELIG 303

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNI 339
             ++  R +       ++          +L          +G  +GF+RLV   TG +NI
Sbjct: 304 GSQREERLDYLEARLDELNLNKDSY-WWYLDLRRYGSVPHAGFGLGFERLVQFATGMDNI 362

Query: 340 NEVIWTPFS 348
            + I  P  
Sbjct: 363 RDTIPFPRV 371


>gi|239608825|gb|EEQ85812.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327356134|gb|EGE84991.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 558

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 99/326 (30%), Gaps = 24/326 (7%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           + +     EY +++    I +  L  +  +E     F        + +K  YL  SP+  
Sbjct: 248 SGVAQLFTEYMLKSGSRWISTPKLTGNA-SEGGAGVFEVT-----YFKKKAYLAQSPQLY 301

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
            +  +A     +F     +R  E     H  EF  L++ +  +S+   + +    +    
Sbjct: 302 KQMCIAGDLGSVFEVGPVFRAEESNTHRHLTEFIGLDFEKTFQSHYHEVLEFAEDLLVFI 361

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
               ++ F  +                    +   +     +    +    +   +  + 
Sbjct: 362 LSQLKERFKKEIEVIQRSYPKAGDFKLPKDGKALRLKYMEGVALLKEAGVDVTEQEKFEN 421

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFE 263
            +  A +     I                   +LD++P           P DP F+  ++
Sbjct: 422 DLTTAMEKQLGRIIREKYD---------TDFYVLDKFPMAVRPFYTKPCPDDPTFSNSYD 472

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
            +    E+ +    + +  E       E     K  +      ED++       P  +G 
Sbjct: 473 FFMRGEEIMSGAQRINEAKEL------EAAMTAKGLDPNGEGFEDYIGAFRQGCPPHAGG 526

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFS 348
            +G +R+VM   G  NI      P  
Sbjct: 527 GLGLNRIVMFFLGLPNIRLATLFPRD 552


>gi|166711570|ref|ZP_02242777.1| asparaginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 464

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/370 (17%), Positives = 107/370 (28%), Gaps = 44/370 (11%)

Query: 1   MHQIPSQPWWNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +   P  P + R+  H R R  L       RN +  ++  +F +N F  I +  +  S  
Sbjct: 109 IQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDA 168

Query: 54  GNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                +   ST                 +D   K  +L  S + + +    A   K++ F
Sbjct: 169 EGAGQMFRVSTLDMVNLPRDATGNVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTF 227

Query: 101 AHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A     +  +     ++        +         
Sbjct: 228 GPTFRAENSHTTRHLAEFWMIEPEIAFADLAEDARLAEQFLKYVFRAVLDERGDDLAFLV 287

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                 E +         A I+        +Q D        Q AG        W     
Sbjct: 288 ------ERVDKNAISKLEAFINAP-----FEQIDYTDAVKLLQHAGKTFDFPVEWGLDLQ 336

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
                 +     I    ++  YP    A       D +             L     E++
Sbjct: 337 TEHERWLTEEH-IGRPVVVINYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEII 389

Query: 280 DPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
              ++  R +          +  E Y    DF          +G  +GF+RLV+ V G +
Sbjct: 390 GGSQREERLDVLDARMAQFGLDKEHYSWYRDFRR--YGSVPHAGFGLGFERLVVYVCGLS 447

Query: 338 NINEVIWTPF 347
           NI + I  P 
Sbjct: 448 NIRDAIPYPR 457


>gi|227890024|ref|ZP_04007829.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849468|gb|EEJ59554.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 432

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 104/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           + ++  W R    R    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDNRHLWLRSK--RPFAIMQIRNTMFKATIDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   D+     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVDYFNNDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +                      +   E   +    D
Sbjct: 226 PEMAWMHQDESLDIQERYLAYMVKQV--------------------LENNEYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFTRLSYDDAIKMLQEAGRDIKWGDDFGAPDEGYISEQ--FDRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR---HRFEKEMQEKKKI 298
           P            D                     E+    E+       +++++E   +
Sbjct: 324 PTTIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEILKQQIEE-AGL 378

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y     +L          SG  MGF+R +  +   ++I E I  P  
Sbjct: 379 NLEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWICKLDHIREAIPFPRL 426


>gi|228985294|ref|ZP_04145457.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228774449|gb|EEM22852.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 428

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 104/341 (30%), Gaps = 44/341 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++    S  E+  EN F  I +  +    G E     F        + +
Sbjct: 120 RHERIATIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 173

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 174 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 233

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 234 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 274 TLLQ-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED-- 308
               +P  T  F+L    +E+ +    + +       F            +    D+   
Sbjct: 332 PNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASF----------NEKGLHPDKFQS 381

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +L       P   G  +G +R+V  +    N+ E    P  
Sbjct: 382 YLNTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 422


>gi|161582007|ref|NP_230942.2| asparaginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|229505118|ref|ZP_04394628.1| asparaginyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229511212|ref|ZP_04400691.1| asparaginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229518330|ref|ZP_04407774.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229521407|ref|ZP_04410826.1| asparaginyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229608136|ref|YP_002878784.1| asparaginyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|255745693|ref|ZP_05419641.1| asparaginyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262159032|ref|ZP_06030144.1| asparaginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262169389|ref|ZP_06037081.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|20139940|sp|Q9KSF9|SYN_VIBCH RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|229341505|gb|EEO06508.1| asparaginyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229345045|gb|EEO10019.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229351177|gb|EEO16118.1| asparaginyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357341|gb|EEO22258.1| asparaginyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229370791|gb|ACQ61214.1| asparaginyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|255736768|gb|EET92165.1| asparaginyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262022202|gb|EEY40911.1| asparaginyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262029217|gb|EEY47869.1| asparaginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 466

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 107/360 (29%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAIS-KVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +    +  +   F++     V 
Sbjct: 242 RHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVI 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++   D           D        +  G        W    +      +     
Sbjct: 298 ARLEQFVESDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DARMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|159474374|ref|XP_001695300.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158275783|gb|EDP01558.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 545

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 101/336 (30%), Gaps = 40/336 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDHIRKPL 76
           +     ++ +    +   +   F EI +  L      G     R         D++  P 
Sbjct: 238 QAIFKVQSAVCQLFKTTLLAEGFQEIHTPKLIAGASEGGAAVFR--------LDYMGVPA 289

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  + A   ++F     +R        H  EF  L+   A   +   + D
Sbjct: 290 CLAQSPQLYKQMAICADFNRVFEIGPVFRAEFSYTHRHLCEFMGLDLEMAIHEHYFEVLD 349

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            +  +  A        ++ +          E  T                   P +    
Sbjct: 350 VIEKLFGAIFNGLATTYAKELAVIASQYPFEIPTFK-----------------PLRLTFP 392

Query: 196 LLYLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYP 253
                 ++ G   V      +    R L   ++   G +   IL RYP+           
Sbjct: 393 EGIAMLKEGGYPDVDPMGDLNTELERALGRMVKEKYGTD-FFILHRYPSAVRPFYTMPCS 451

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
            DP ++  ++++    E+ +    + DP     R  +              I + ++   
Sbjct: 452 DDPAYSNSYDVFIRGEEIISGAQRVHDPELLTTRAIEC-------GIPLPEI-QSYIDSF 503

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               P   G  +G +R+VML  G NNI +    P  
Sbjct: 504 KYGAPPHGGAGVGLERVVMLYCGLNNIRKTSMFPRD 539


>gi|297738713|emb|CBI27958.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/388 (14%), Positives = 110/388 (28%), Gaps = 62/388 (15%)

Query: 3   QIPSQPWWN---RD-FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +P         RD  H+R R          RN +  +   +F  + F+ I +  +  S 
Sbjct: 142 PLPKTRLTLEFLRDFVHFRPRTNTISAVARIRNALAYATHTFFQNHGFLYIHTPIITTSD 201

Query: 53  PGNETHIRAFSTELIIQDH-------------------------------IRKPLYLQTS 81
                 +  F    +I D                                  +  +L  S
Sbjct: 202 CEGAGEM--FQVTTLISDAEKENLSRLEERSKLKPGIPQKDGKIDYSQDFFARQAFLTVS 259

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
            +   +    A    ++ F   +R        H  EF M+E   A    +  M      +
Sbjct: 260 GQLQVETYACAVS-SVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADLKDDMNCAEAYV 318

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +   +                  E       +       +   T  +     +   L  +
Sbjct: 319 KFLCQWLLDNCIDD--------MEFMAKNFDKGCIDRLRMVASTPFERISYTEAIKLLEE 370

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A +   +  +   W    +      +   +      I+  YP    A       D +   
Sbjct: 371 AVKKDKKFENKVEWGIDLASEHERFLTE-VLFKKPVIVHDYPKGIKAFYMRLNDDMKTVA 429

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQS 319
             ++    +       EL+   ++  R+E   +   ++     P  E +L        + 
Sbjct: 430 AMDVLVPKV------GELIGGSQREERYEVIEKRILEMGLPLEPY-EWYLDLRRYGTVKH 482

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPF 347
            G  +GF+R+++  TG +NI +VI  P 
Sbjct: 483 CGFGLGFERMILFATGIDNIRDVIPFPR 510


>gi|254582717|ref|XP_002499090.1| ZYRO0E03476p [Zygosaccharomyces rouxii]
 gi|186703793|emb|CAQ43483.1| Zr_YCR024C [Zygosaccharomyces rouxii]
 gi|238942664|emb|CAR30835.1| ZYRO0E03476p [Zygosaccharomyces rouxii]
          Length = 463

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 112/351 (31%), Gaps = 26/351 (7%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNET 57
           +  +P     +R  +      L  R+ ++++  ++F +N+F ++    +  S    G E 
Sbjct: 123 LRTLP--HLKHRSNYLGS--LLRFRSHVENTFIQFFAQNEFTKVTPPLITSSDCEGGGEL 178

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPE 116
               F  +    D+  +  YL  S +    + L+    + +  + ++R  +     H  E
Sbjct: 179 ----FKVD-GSNDYFGRSAYLTVSAQLHL-EALSLALNRCYTLSPSFRAEKSDTNRHLCE 232

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           F MLE           +      +  +   +     +       P    +  T+ + +  
Sbjct: 233 FWMLEAEWCFVRDVNELTHFTQNLLKSVIKSCYDNRNELIPQIIPQESDQVSTIIQRWEN 292

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
               D   ++   +     +L  Q         ++  W         + +      +   
Sbjct: 293 LLKNDNWPSITYTEAI--KILREQHSNVKPFPNYEPQWGLALQSEHEKWLAGEYFQSPV- 349

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            +  YP    A    +  D +    F+L    +          D      +   EM  ++
Sbjct: 350 FVTDYPKDCKAFYMKHNDDGQTVACFDLLVPGMGEIVGGSVREDDYI---KLVTEMDRRQ 406

Query: 297 KIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 +  D D+ A L         G  +G +RLV  + G +NI + I  
Sbjct: 407 MN----HNGDLDWYAALRQEGSAPHGGFGLGVERLVSYLYGNHNIRDAIPF 453


>gi|115752517|ref|XP_784585.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115955526|ref|XP_001181152.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 431

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 98/349 (28%), Gaps = 39/349 (11%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL-- 66
           H R R       +  R+    ++  +F +  ++ + +  L  S      ++  F  +   
Sbjct: 99  HLRSRTPINGALMRVRSSATLAVHNFFQDEGYVNVHTPVLTSSDCEGGGNL--FRVQPSD 156

Query: 67  ----IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                       P+YL  S +    + +A    K + F   +R        H  EF M+E
Sbjct: 157 DEKDDDDHFFGTPVYLLVSGQLQL-ETIACSHTKAYTFGPTFRAENSRTRRHLAEFYMVE 215

Query: 122 WYRAHE-SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
              A   S + + +     ++  A     K             E                
Sbjct: 216 GEIAFTKSLQDVTEVMEQFVKSVASAVYTKCSEDVQFISERTMEGTR----------NMR 265

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           +                    ++   +     +W           +  + G     ++  
Sbjct: 266 EHVLHGCYLFILSYTEAISILERHQDQFEFTPSWGIDLHSEHETFLVHHCGNVPVFVV-D 324

Query: 241 YPAPESALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           YP            D +     +L        +  +  E    + QR      +Q     
Sbjct: 325 YPKDIKPFYARQNGDDKTAAAVDLLVPRIGELIGGSLREERLDVLQRRIQHSGLQ----- 379

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +  + ++   L          G  +GF+RL+  + G ++I +VI  P 
Sbjct: 380 DDYQWYLE---LRRF-GTVPHGGFGLGFERLLQFLLGVDHIRDVIPFPR 424


>gi|89889413|ref|ZP_01200924.1| asparaginyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517686|gb|EAS20342.1| asparaginyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 501

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 118/365 (32%), Gaps = 35/365 (9%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R       +  R  +  ++ +YF EN F +  +  +  S       +   ST  
Sbjct: 137 QAHLRVRTNTFGAVMRVRAALSFAVHKYFQENGFYQAHTPIITGSDAEGAGEMFRLSTLD 196

Query: 67  IIQDHIR--------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                +         +  +     L  S +   +        +++ F   +R        
Sbjct: 197 PKNPPLDEEGNIDYKQDFFEKESNLTVSGQLEAETYAMG-LGQVYTFGPTFRAENSNTSR 255

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ------KIFSFQNVNCNPFSEPE 166
           H  EF M+E   A    +  M    + I+   +          +    + +  +      
Sbjct: 256 HLAEFWMIEPEVAFNDLDANMDLSEDFIKSVVKYTIDNCKDDLEFLENRLIQEDKSKPQA 315

Query: 167 YITVAEAFARYANI--DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
             +  E   +   I  +    +   +  D        ++   +   ++  +D+ S     
Sbjct: 316 ERSPMELRKKLEFILKNNFKRVSYTEAIDILKSSKPNKKKKFKYLIEEWGADLQSEHERY 375

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +E +    C  IL  YPA   A       +   ++  E       L     E++   ++
Sbjct: 376 LVEKH--FECPVILFDYPADIKAFYM--RLNDPDSEGRETVRAMDILFPGIGEIIGGSQR 431

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             R++   ++   +      +   +L          SG  +GF+RLVM VTG +NI +VI
Sbjct: 432 EERYDVLKEKMDTMGIPEEEL-WWYLETRKFGSVTHSGFGLGFERLVMFVTGMSNIRDVI 490

Query: 344 WTPFS 348
             P +
Sbjct: 491 PYPRT 495


>gi|84998476|ref|XP_953959.1| asparaginyl-tRNA synthetase (chloroplast/mitochondrial precursor)
           [Theileria annulata]
 gi|65304957|emb|CAI73282.1| asparaginyl-tRNA synthetase (chloroplast/mitochondrial precursor),
           putative [Theileria annulata]
          Length = 590

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 118/360 (32%), Gaps = 27/360 (7%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY---------SPGNET 57
           +    R  + + R  +  R+ I+S + E+F    F E+D+  L +         +    +
Sbjct: 240 KYTHFRFRNKQFRSIIGIRSAIKSYIHEFFQSKNFTEVDTPCLTHMNCENLVPLTLKTAS 299

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPE 116
                 T          P+ L ++ +   +        K++    ++R        H  E
Sbjct: 300 DGTNLDTLGSENTEKNIPVNLSSTGQMELEFACYG-LGKVWKIGPSFRAERSDTIRHANE 358

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           F M+E      S + ++     ++R  A    QK   + N   N   + +   V   F R
Sbjct: 359 FWMIEAELPDASLKGMINLIQEMVRGCATYILQKHGDYVNYLNNFNDKYKDFLVHLVFLR 418

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIEKIEPNLGINCC 235
           Y               D+ +  L    +G         W    S     ++  +   +  
Sbjct: 419 YLIDFQSKANIKLITYDQAVNILNETDSGSDKQDKVFEWGKRLSEPQERRLLKHFDKD-I 477

Query: 236 TILDRYPAPESALANIYPADPRFT----KRFE-LYACNIELCNACDELLDPIEQRHRFEK 290
             +  +P   +            +    + F+ L     E+        +        ++
Sbjct: 478 IAITNFPESITPFYMKRTDGSVNSRITVENFDILAPFGYEIAGGSIREHEY----EVLKR 533

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMP-QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +M E+K    E     E ++     +     G  +GFDRLVML+T   NI +V   P ++
Sbjct: 534 KMDERKVSGEEY----EKYINLRKNIYLPHGGFGVGFDRLVMLMTMKENIKDVTPFPVTK 589


>gi|302528981|ref|ZP_07281323.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302437876|gb|EFL09692.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 420

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 96/339 (28%), Gaps = 57/339 (16%)

Query: 18  RRPFLLKRNMI----QSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
           R P L +R  +     ++ R       F EI +  +  +   E+    F       D+  
Sbjct: 125 RHPVLRRRFEVAAASVAAFRRALDGQGFTEIHTPKIVATA-TESGANVFQ-----LDYFG 178

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAH-ESYEQ 131
           +P YL  SP+F  K+ +    E+++     +R        H  ++T L+        +  
Sbjct: 179 RPAYLAQSPQFF-KQAMVGVFERVYEVGPVFRAEPHDTARHLAQYTSLDAELGFIADHRD 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    +++   A                                 A  D  T  +    
Sbjct: 238 VMTVLRDVVAEMAAA-------------------------------AGPDAPTVPEEIPS 266

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
            D         +        +          + +       +    +  YP  +     +
Sbjct: 267 IDFAAAQALLARNTSEDPRGEPDLAPAHERWLGEWAEREHGSEFLFVTGYPMAKRPFYTH 326

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             PADP  +  F+L    +EL      L    +                 E      D+L
Sbjct: 327 PDPADPARSHSFDLLFRGLELVTGGQRLHRHADYLAVL-----------GEAAAQYSDYL 375

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G A+G +R V  V G  N+      P  
Sbjct: 376 DAFAYGMPPHGGFAIGLERWVARVLGVANVRGATLFPRD 414


>gi|229525887|ref|ZP_04415292.1| asparaginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339468|gb|EEO04485.1| asparaginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 466

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 108/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAIS-KVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +    +  +   F++     V 
Sbjct: 242 RHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVI 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++ + D           D        +  G        W    +      +     
Sbjct: 298 ARLEQFVDSDFAHV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DARMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|171682808|ref|XP_001906347.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941363|emb|CAP67013.1| unnamed protein product [Podospora anserina S mat+]
          Length = 914

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 107/331 (32%), Gaps = 27/331 (8%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
                + I S  R     + FIEI +  L  +   E+    F       ++  +  +L  
Sbjct: 255 IFRINSGICSIFRSVLEGHGFIEIHTPKLMPAA-TESGAEVFKV-----NYFGRTAFLAQ 308

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+ S +  ++A   ++F     +R  +     H  E+T L+   A  S      + ++ 
Sbjct: 309 SPQLSKQLSISADFGRVFEIGPVFRAEDSNTHRHLTEYTGLDLEMAINSDYHEALNIIDD 368

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +  +        F  +          E +   E    +   +    L+     D H    
Sbjct: 369 MMKSIFKGIYTRFRREIEIIKTRFPHEDLVWLEKTPVFTFKEAIALLNESGWTDDHGKPA 428

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRF 258
              +  +    +    ++                   I+D++PA       +    DPRF
Sbjct: 429 SELE-DLSTRAEIRLGEVI---------KKKYNTDYYIIDKFPASVRPFYTHPDEEDPRF 478

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           T  F+++    E+      +  P     R        KK   E + + E +L      + 
Sbjct: 479 TNSFDIFLRGQEITTGGQRIHKPDVLVERM-------KKAGIEPFGMQE-YLQGFEYGVL 530

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +G  +G +R++ L+    +I      P  
Sbjct: 531 PHAGCGIGLERIIFLMLSLGDIRNASLFPRD 561


>gi|160936241|ref|ZP_02083614.1| hypothetical protein CLOBOL_01137 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441051|gb|EDP18775.1| hypothetical protein CLOBOL_01137 [Clostridium bolteae ATCC
           BAA-613]
          Length = 443

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 110/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  I    R+Y +   F EI +   +       ++       +   ++ 
Sbjct: 135 RNVRERAKFKIQEGIVRGFRDYLLSRDFTEIRTPKIVARGAEGGSN-------VFKLEYF 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            K   L  SP+F  K+ +    +++F  A  +R  +     H  E+T L++   +    +
Sbjct: 188 NKKAELGQSPQFY-KQTMVGVYDRVFEAAPVFRAEKHNTTRHLNEYTSLDFEMGYIDSFR 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            + D    +        ++ +  +                        + L      P  
Sbjct: 247 DVMDMETGMLQYVMKLLEQDYKKELDM-------------------LGVTLPEVGRIPAV 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  L +++   ++ +          ++    +   G +    +  YP+ +     +
Sbjct: 288 RFDQAKELVSRKYDRKIRNPYDLEPEEELLIGRYFQEEYGSD-FVFVTHYPSKKRPFYAM 346

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               DPRFT  F+L    +E+      + D  E   + E     K+ +  E       +L
Sbjct: 347 DDPADPRFTLSFDLLFRGLEVTTGGQRIHDYREITAKME-----KRGMDPEDI---ASYL 398

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G+ +G +RL M +    N+ E    P  
Sbjct: 399 MIFKYGMPPHGGLGIGLERLTMRLLDEQNVREASLFPRD 437


>gi|325118293|emb|CBZ53844.1| Asparaginyl-tRNA synthetase, related [Neospora caninum Liverpool]
          Length = 542

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 109/382 (28%), Gaps = 66/382 (17%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R +L       R+ +  +   +F +  F+ I +  +  S       +   ST L 
Sbjct: 172 AHLRPRSYLIGAVTRVRSNLAMATHRFFQDRGFLYIHTPIVTASDCEGAGEMFQVSTLLP 231

Query: 68  IQ----------------------------------------DHIRKPLYLQTSPEFSCK 87
                                                     D   +P +L  S + + +
Sbjct: 232 PPPAETKENEKKADGAANGQAAAPAEPLVPLTKDKRGVDYSRDFFGRPAFLTVSGQLAVE 291

Query: 88  KLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV 146
               A    ++ F   +R        H  EF M+E   A  + E  M      ++   + 
Sbjct: 292 PYCCA-LSDVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFATLEDNMVVAEAYVKFCVQW 350

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
                      +   F +       E        ++             +  L+A++   
Sbjct: 351 V----LDNCRADIEWFQK-----NQEEGLVARLENILAEPFARVSYTEAIEILKAEEPKA 401

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
           +      W           +  N+      I+  YP    A       D +  +  ++  
Sbjct: 402 QFKEKVEWGMDMGSEHERYLTENIYKKP-CIVYNYPKDIKAFYMKLNEDGKTVRAMDVLV 460

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMG 325
             I       +  D    R R    +Q K  +  + Y     ++          +G  +G
Sbjct: 461 PKIGELVGGSQREDD---RDRLAAMIQAKN-LDPKPY---WWYMELREYGTIPHAGFGLG 513

Query: 326 FDRLVMLVTGANNINEVIWTPF 347
           F+RLVMLVTG  NI + I  P 
Sbjct: 514 FERLVMLVTGIENIRDTIPYPR 535


>gi|329770483|ref|ZP_08261861.1| asparaginyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328836232|gb|EGF85901.1| asparaginyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 428

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 113/349 (32%), Gaps = 46/349 (13%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
           ++  W R    ++   L  RN I  S  ++F +  FI+ D   L  S P         +T
Sbjct: 114 NRHIWIRSK--KQHAILTIRNQIIKSTYDFFEKEGFIKTDPPILTSSAPEG-------TT 164

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           EL    +  +  YL  S +   +  + +   K+F F   +R  +     H  EF M+E  
Sbjct: 165 ELFNTKYFDEEAYLSQSGQLYLEATVMS-FGKVFSFGPTFRAEKSKTRRHLIEFWMIEAE 223

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A  ++++ +      +        +K                     +   +    DL 
Sbjct: 224 MAFCNHDESLAIQEAYVNYLLTEVIEKC--------------------QEQLKILGRDLE 263

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           +      +  R       +        D  + D F       I      N    +  +P 
Sbjct: 264 SLNAARGEFPRIKYKDAIKLLKDNGFDDIEYGDDFGSPHETFIA--NSYNKPVFITHWPL 321

Query: 244 PESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                  I  P +P      +L A          E++   ++   ++K ++  KK     
Sbjct: 322 DIKPFYMIEDPNEPGVVLCADLIAP-----EGYGEIIGGSQRIDDYDKLLENIKKHDL-- 374

Query: 303 YPIDE--DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +D    +L        + SG  +G +R V  +TG  ++ E +  P  
Sbjct: 375 -NLDAYGWYLDLRKYGSVEHSGFGLGLERTVAWITGNGHVRETVPFPRL 422


>gi|30262201|ref|NP_844578.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47527478|ref|YP_018827.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185042|ref|YP_028294.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|165872218|ref|ZP_02216856.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167641071|ref|ZP_02399327.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170686496|ref|ZP_02877717.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170708425|ref|ZP_02898868.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177650759|ref|ZP_02933656.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567860|ref|ZP_03020771.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227814999|ref|YP_002815008.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229601858|ref|YP_002866551.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254684769|ref|ZP_05148629.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254721062|ref|ZP_05182853.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254737216|ref|ZP_05194920.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751531|ref|ZP_05203568.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254759046|ref|ZP_05211073.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|30256832|gb|AAP26064.1| aspartate--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47502626|gb|AAT31302.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178969|gb|AAT54345.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712011|gb|EDR17550.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510969|gb|EDR86359.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126664|gb|EDS95548.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170669572|gb|EDT20314.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172083220|gb|EDT68281.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560915|gb|EDV14889.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227004153|gb|ACP13896.1| aspartate--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229266266|gb|ACQ47903.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 432

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQEILKSKYCKESPVGDLDTEG-EKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNNENSAITDSFDLLYKGLEITSGAQRIHNYEMLLDSF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|209694860|ref|YP_002262788.1| asparaginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208008811|emb|CAQ79014.1| asparaginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 466

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  ++ + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYLWMSAPLITSSDAEGAGEM--FRVSTL 182

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGC 111
                            D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DHANVPLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSHTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    + + K   ++++   E    +         +   + E IT  
Sbjct: 242 RHLAEFWMVEPEVAFADLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDK-EAITRL 300

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D          +G +   D  W    S      +     
Sbjct: 301 EQF----------VSSDFAQVDYTDAIQILIDSGKKFEFDVEWGIDMSSEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRQNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +  +   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DARMIEMGIDPEHMTWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|120434466|ref|YP_860168.1| asparaginyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117576616|emb|CAL65085.1| asparaginyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 480

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/365 (14%), Positives = 112/365 (30%), Gaps = 39/365 (10%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI------- 59
             H R R       +  R+ +  ++ +YF E  F  +++  +  S       +       
Sbjct: 120 QAHLRVRTNTFGAVMRVRSKLSFAVHKYFQEKNFYYVNTPIITGSDAEGAGEMFRVSALD 179

Query: 60  --RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                  E    ++      K   L  S +   +        +++ F   +R        
Sbjct: 180 MKNPPKNEDGSINYKEDFFGKETNLTVSGQLEAETFALG-LGQVYTFGPTFRAENSNTSR 238

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A    +Q M    + I+       +                + +    
Sbjct: 239 HLAEFWMIEPEVAFCDLDQNMDLAEDFIKYVLRYVIENCKEDLEFLAERQESEDKLKPKA 298

Query: 173 AFARYANID--------LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
             +    ++            +   +  +        ++       ++  +D+ S     
Sbjct: 299 ERSEMTLLEKLNFVLDNNFKRVSYTEAIEILKNSKPNKKKKFNYVIEEWGADLQSEHERF 358

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +E +    C  IL  YPA   A       D +  +  ++    I       E++   ++
Sbjct: 359 LVEKH--FKCPVILFDYPANIKAFYMRMNEDGKTVRAMDILFPGI------GEIVGGSQR 410

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
             R +   ++  ++      +   +L          SG  +GF+RLV   TG  NI +VI
Sbjct: 411 EERLDVLKEKMAELDIPEEEL-WWYLDTRKFGTCVHSGFGLGFERLVQFTTGMGNIRDVI 469

Query: 344 WTPFS 348
             P +
Sbjct: 470 PFPRT 474


>gi|258516710|ref|YP_003192932.1| asparaginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780415|gb|ACV64309.1| asparaginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 430

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/347 (17%), Positives = 111/347 (31%), Gaps = 45/347 (12%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W R    R+   L  R+ I+ ++R++F E  FI  DS  +       T      T L
Sbjct: 118 RHLWIRG--PRQASILRIRSEIEQAIRDFFYERDFILADSPIITALAAEGT------TNL 169

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
              D+  +  YL  + +    +  A    +++ F   +R  +     H  EF M E   A
Sbjct: 170 FEIDYHGEKAYLAQTGQLYS-EATAMALGRVYNFGPVFRAEKSKTRRHLLEFWMAEAEMA 228

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
           +  +E  +K    ++    +   Q+             + E ++                
Sbjct: 229 YCDHEANLKIQEELVYYIIQRVLQRKSLELKTLKRDIGKLEAVS---------------- 272

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                 P   + Y +A +       D  W D F       +           + R+PA  
Sbjct: 273 -----LPFPRISYTEAVKILRDSGEDFNWGDDFGAPQETLLSERFAS--PLFVHRFPAEI 325

Query: 246 -SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            +      P D +     +L A               I    R E  +  ++KI     P
Sbjct: 326 KAFYMKPDPEDSKVVLGADLLAPEGYGE--------IIGGGQRIEDLVLLRQKIMQHNLP 377

Query: 305 IDED--FLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +E   +L          +G  +G +R V  + G  +I E +  P  
Sbjct: 378 EEEFQWYLDLRRYGSVPHAGFGLGLERTVAWICGIEHIREAVPFPRM 424


>gi|148361403|gb|ABQ59283.1| putative lysyl-tRNA synthetase [Mycoplasma gateae]
          Length = 224

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 10/233 (4%)

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            KK +  G E+++     +RN      H PEFT +E+Y A+     +M+    + +   +
Sbjct: 1   LKKCIVGGLERVYEIGRIFRNEGVDSTHNPEFTSIEFYEAYSDMWGMMERTEGVFKHLTQ 60

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                   F   +         I + +A +    +D+    D             A+Q G
Sbjct: 61  KLGIDKVKFNGYDIEFKYPFAKINMVDAVSSKIGVDVRKLND-------EQALELAKQHG 113

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           I+         + + +  + IE    +   T +  +P   S LA     D RFT+R EL+
Sbjct: 114 IKTEKYYKLGHVINDLFEKYIEDT--LIQPTFVYGHPIEISPLAFKELDDERFTQRAELF 171

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
               E  N   EL DPI+Q  RFE ++ E++    E   ID DF+  L   +P
Sbjct: 172 IGTKEFANMFTELSDPIDQLERFEAQLDERENGNEEANEIDWDFVNALEYGLP 224


>gi|254480911|ref|ZP_05094157.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214038706|gb|EEB79367.1| asparaginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 465

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 105/356 (29%), Gaps = 41/356 (11%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R  + +++  YF +N F  I++  L  S       +   ST  
Sbjct: 125 QAHLRPRTNTFGAITRVRTTLANAIHNYFHDNDFNWINTPILTGSDCEGAGELFRVSTLD 184

Query: 67  IIQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                           D      +L  S +   +    A   K++ F   +R        
Sbjct: 185 FANLPLDGKGGVNFEEDFFAGESFLTVSGQLEVESYCLAMS-KVYTFGPTFRAENSNTSR 243

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A            ++++        +I   +  +   F +    TV +
Sbjct: 244 HLAEFWMVEPEIAFADLNDDADLAESLLKH----VFTRILEEREDDMAFFQQRIDKTVID 299

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                         +N ++ D        +++G +  +   W    +      +     +
Sbjct: 300 RLR-------AVIDNNFERMDYSEAITILKKSGKKFEYPVEWGVDMASEHERFLAEEH-V 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               ++  YP    A       D +             L     E++   ++  R +   
Sbjct: 352 GRPVVVMNYPKDIKAFYMRLNDDEKTVAAM------DVLAPGIGEIIGGSQREERLDVLD 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +   E      D           +G  +GF+RL+  VTG  N+ + I  P +
Sbjct: 406 ARMDEHLREELWWYRDLRR--YGTVPHAGFGLGFERLLNYVTGMENVRDAIPFPRT 459


>gi|260772904|ref|ZP_05881820.1| asparaginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612043|gb|EEX37246.1| asparaginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 466

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 105/356 (29%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDF 184

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ANLPRQENGEIDFNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      + +   ++++        +         +   + + IT  E 
Sbjct: 244 LAEFWMVEPEVAFADLHDVAQLAEDMLKYVFNAVLTERRDDLEFFASRIDK-DAITRLEQ 302

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F +           +  Q D          +G +   D  W    S      +       
Sbjct: 303 FVQ----------SDFAQVDYTDAITILLDSGRKFEFDVEWGIDLSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVIVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 406 RMIEMGIDPEHMSWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|119498141|ref|XP_001265828.1| aspartyl-tRNA synthetase Dps1, putative [Neosartorya fischeri NRRL
           181]
 gi|119413992|gb|EAW23931.1| aspartyl-tRNA synthetase Dps1, putative [Neosartorya fischeri NRRL
           181]
          Length = 555

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/322 (16%), Positives = 104/322 (32%), Gaps = 32/322 (9%)

Query: 34  EYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
           EY +++    I +  L  +   E     F  +   ++      YL  SP+   +  +A  
Sbjct: 253 EYMIKSGSRWIFTPKLVGAA-TEGGSNVFEVKYFKRNA-----YLAQSPQLYKQMCIAGD 306

Query: 94  EEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
            E +F  A  +R  E     H  EF  L++ +   S+   + +    +        ++ +
Sbjct: 307 MESVFEIAPVFRAEESNTHRHLTEFAGLDFEKTFRSHYHEVLEFAEDLLVFILSQLKERY 366

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
             Q                      A            + +        + AG+ V+  +
Sbjct: 367 KDQIAIIQKSYP------------KAGDFKLPKDGKALRLNYMDGVALLKDAGVDVSEQE 414

Query: 213 TWSDIF----SRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYAC 267
            + +       + L + I      +   +LD++P           P DPRF+  ++ +  
Sbjct: 415 RFENDLTTAMEKQLGQIIRDKYDTD-FYVLDKFPMAVRPFYTKACPQDPRFSNSYDFFMR 473

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+ +    + D  E             K  +      ED+LA      P  +G  +G 
Sbjct: 474 GEEIMSGAQRINDIKELEE------SMIAKGLDPKQEGFEDYLAAFRQGCPPHAGGGLGL 527

Query: 327 DRLVMLVTGANNINEVIWTPFS 348
           +R+VM   G  N+      P  
Sbjct: 528 NRIVMFFLGLPNVRLASLFPRD 549


>gi|294672843|ref|YP_003573459.1| asparagine--tRNA ligase [Prevotella ruminicola 23]
 gi|294473509|gb|ADE82898.1| asparagine--tRNA ligase [Prevotella ruminicola 23]
          Length = 479

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/368 (16%), Positives = 115/368 (31%), Gaps = 41/368 (11%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
            ++ H R R       +  R+ +  ++  YF E+ F    +  +  S      ++   +T
Sbjct: 117 RKNAHMRLRTNTFGAVMRIRHNMAMAIHTYFHEHGFFYFHTPLITASDCEGAGNMFQVTT 176

Query: 65  E-------------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
           +             +   D   +   L  S +   +    A    I+ F   +R      
Sbjct: 177 KNLYDLKKDENGKIIYDDDFFGEQTSLTVSGQLEGELGATA-LGSIYTFGPTFRAENSNT 235

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF M+E   A    E+LM    + I+     A          +    ++    T+
Sbjct: 236 PRHLAEFWMVEPEVAFLDQEELMDLEEDFIKYCVRWA----LDNCKDDLEFLNKMIDKTL 291

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            E   R   +   T +  P     ++L   A + G +      W D  +      +    
Sbjct: 292 IE---RLEGVLKETFVRLPYTEGINILQE-AIKNGKKFEFPCNWGDDLASEHERYLVEEH 347

Query: 231 GINCCTILDRYPAPESALANIYPAD---------PRFTKRFELYACNIELCNACDELLDP 281
                 I+  YP    +       D                        L     E++  
Sbjct: 348 FKKPV-IMTDYPRAFKSFYMKQNQDTADGGSVGYKGAVAPGPTMQGTDVLFPQIGEIIGG 406

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
             +   ++K M E  +   +   +   ++          +G  +GF+RL++ VTG  NI 
Sbjct: 407 SVREESYDKLMGEINRREMDQTHL-WWYIDTRKWGSCPHAGFGLGFERLILFVTGMQNIR 465

Query: 341 EVIWTPFS 348
           +VI  P +
Sbjct: 466 DVIPFPRT 473


>gi|229155785|ref|ZP_04283891.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228627771|gb|EEK84492.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 428

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 104/341 (30%), Gaps = 44/341 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++    S  E+  EN F  I +  +    G E     F        + +
Sbjct: 120 RHERIAAIFKVKSTFVHSFSEFLAENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 173

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 174 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 233

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 234 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                     +    + +          ++L + ++          +  YP     +   
Sbjct: 274 TLLQ-AQEILKSKYRKESPVGDLDTEGEKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED-- 308
               +P  T  F+L    +E+ +    + +       F            +    D+   
Sbjct: 332 PNKENPAITDSFDLLYKGLEITSGAQRIHNYEMLLASF----------NEKGLHPDKFQS 381

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +L       P   G  +G +R+V  +    N+ E    P  
Sbjct: 382 YLNTFRYGCPPHGGFGIGLERVVYKLLELTNVREASAFPRD 422


>gi|212703997|ref|ZP_03312125.1| hypothetical protein DESPIG_02050 [Desulfovibrio piger ATCC 29098]
 gi|212672590|gb|EEB33073.1| hypothetical protein DESPIG_02050 [Desulfovibrio piger ATCC 29098]
          Length = 454

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 111/348 (31%), Gaps = 33/348 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+    ++ +YF    F  + +  L  S       +   +    
Sbjct: 121 AHLRMRTNKYGAAFRIRSEAARAVHDYFHSQHFSWVHTPILTGSDCEGAGEMFRVTALPA 180

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            +  + K  +     L  S +    + LA G  +++ F   +R        H  EF M+E
Sbjct: 181 GEKDLSKDFFGRQANLTVSGQLEA-EALALGLGRVYTFGPTFRAENSNTPRHAAEFWMIE 239

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E +M+    + R           +    +   F       + +   R   + 
Sbjct: 240 PEMAFAELEDIMELGEGLTRH----VVDHALTRCESDLKLFDNFVDKGLID---RLKGML 292

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                    +   H+L    ++    VA      D+ +       E +       I+  Y
Sbjct: 293 AQPFARVSYRDAIHILEDSGKEFTFPVAFGV---DLQTEHERFLAEEH--FRRPVIVYDY 347

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P    A       D       ++    I       EL+   ++  R +K +    ++  +
Sbjct: 348 PKEIKAFYMRGNDDGETVAAMDVLVPRI------GELIGGSQREERLDKLLARIAEMGQK 401

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  +L          +G  MGF+RL+M++TG  NI +VI  P +
Sbjct: 402 PEDY-WWYLDLRRFGSVPHAGFGMGFERLLMMLTGITNIRDVIPFPRT 448


>gi|256819219|ref|YP_003140498.1| asparaginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256580802|gb|ACU91937.1| asparaginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 476

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 117/379 (30%), Gaps = 48/379 (12%)

Query: 5   PSQP---WWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +   + H R R       +  R+ +  ++ +YF +N F  +++  +  S    
Sbjct: 105 PKKHSLEFLRENAHLRVRSSTFSAVMRVRSTLAFAIHKYFQDNGFFYVNTPIITGSDAEG 164

Query: 56  ETHIRAFSTELIIQDHIR--------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAH 102
              +   +T       +         K  +     L  S +    +  A    KI+ F  
Sbjct: 165 AGEMFRVTTLDAKNPPLNENGEVDYKKDFFGRETNLTVSGQL-EGETFAMALGKIYTFGP 223

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A       M    + I+   +   +            
Sbjct: 224 TFRAENSNTSRHLAEFWMIEPEMAFYDLIDNMNLAEDFIKYVLQYTLEVRRDDLEFLNKR 283

Query: 162 FSEPEYITVAEAFA--------RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
           F E E        +         +   +    +   +  D        ++   +   ++ 
Sbjct: 284 FLEEEKTKPQNERSTMSLIEKLEFVIHNQFKRVSYTEAIDILKNSNHNKKKKFQYPVNEW 343

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
             D+ S      +E +    C  IL  YPA   A       D +  +  ++    I    
Sbjct: 344 GVDLQSEHERYLVEKH--FECPVILYDYPANIKAFYMRLNEDGKTVRAMDILFPGIGEIV 401

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNET---YPID-EDFLACLTEMPQSSGIAMGFDRL 329
              +  +  +         +      +E    + +D   F   +      SG  +GF+RL
Sbjct: 402 GGSQREERYDVLK-----QKIADLHMDEATLWWYLDLRKFGTAV-----HSGFGLGFERL 451

Query: 330 VMLVTGANNINEVIWTPFS 348
           V+  TG  NI +VI  P +
Sbjct: 452 VLFATGMTNIRDVIPYPRT 470


>gi|254281891|ref|ZP_04956859.1| asparaginyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678094|gb|EED34443.1| asparaginyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 465

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 46/361 (12%), Positives = 104/361 (28%), Gaps = 51/361 (14%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R++   ++ E F    F  +++  +  S       +  F    
Sbjct: 125 QAHLRPRTNTFGAITRIRHVAAQAIHELFSREGFYWVNTPIITASDCEGAGEL--FRVSH 182

Query: 67  IIQDHIRK---------------PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QG 110
           +  +++ +                 +L  S + + +    A   K++ F   +R      
Sbjct: 183 LDWNNLPRKPDGSVDQSQDFFGDEAFLTVSGQLALESHCLAMS-KVYSFGPTFRAENSHT 241

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF M+E   A        +    +++                  +     + I  
Sbjct: 242 SRHLAEFWMVEPEIAFADLNDNAELAERLLKHVIARVLD------RCEVDMAFFEQRIDD 295

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                    +D         +          +++  +      W    +      +    
Sbjct: 296 TVISRLRNILDNAFERMTYTEA-----IAILERSKEQFEFPVRWGIDMASEHERYLAEKH 350

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFE 289
            +    ++  YP+   A       D +     ++ A  + E+               R E
Sbjct: 351 -VGRPVVVTDYPSDIKAFYMRLNDDGKTVAAMDVLAPGVGEIIGGSQREDRLDVLDSRME 409

Query: 290 KEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +++E           D  +   L        +G  +GF+RL+  +TG +N+ +VI  P 
Sbjct: 410 PQLRE-----------DLWWYRDLRRYGSVPHAGFGLGFERLLAYLTGMDNVRDVIPFPR 458

Query: 348 S 348
           +
Sbjct: 459 T 459


>gi|228927265|ref|ZP_04090327.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228832412|gb|EEM77987.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 432

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 108/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + +           +  YP     +   
Sbjct: 278 TLLEAQEILKSKYCKESPVGDLDTEG-EKLLGKYVNETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNNENSSITDSFDLLYKGLEITSGAQRIHNYEMLLDSF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|50303123|ref|XP_451499.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640630|emb|CAH03087.1| KLLA0A11484p [Kluyveromyces lactis]
          Length = 474

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 110/350 (31%), Gaps = 38/350 (10%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNET 57
           + ++P   + +R  +      L  R+ ++S L +      F  +    L         E 
Sbjct: 149 LRKLPE--FKHRTTYLS--NLLRFRHKVESQLTKTLDGLDFTMVRPPILTSIDCEGAGEM 204

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPE 116
                    + QDH  + + L  S +    ++L  G  +++C    +R  +     H  E
Sbjct: 205 F-------NLKQDHWDEIVNLTVSSQLHL-EVLMMGLGRVYCLQPCFRAEKSDTNRHLCE 256

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           F MLE   +     + + D + ++  +  ++  +                     +  +R
Sbjct: 257 FWMLEVEASFVDKNESLMDLVELMVKSVVLSLSETKDLPKY-------FPVGCNIDITSR 309

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +A       L +  +            +G++  HD  W    +      +  + G     
Sbjct: 310 WA-----KLLQDWKRITYTDAVEALLSSGVKFEHDLAWGKDLNSEHERWLCDHFG--GPV 362

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            +  YP    A       D    + F+L    I          D  +         QE +
Sbjct: 363 FVTNYPRDCKAFYMKLRPDGTTVECFDLLFPEIGEIVGGSVREDDYDTLK------QEIE 416

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +    +  +D  +L           G  +G +RLV  + G  NI + I  
Sbjct: 417 RRDMASNQLDW-YLNLRKEGTVPHGGFGIGIERLVSYLYGNPNIRDSIPF 465


>gi|154278074|ref|XP_001539861.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150413446|gb|EDN08829.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 756

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 99/326 (30%), Gaps = 24/326 (7%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           + +     EY +++    I +  L  +  +E     F        + ++  YL  SP+  
Sbjct: 446 SGVAQLFMEYMLKSGSRWISTPKLTANA-SEGGAGVFEVT-----YFKRKAYLAQSPQLY 499

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
            +  +A   E +F     +R  E     H  EF  L++ +  +S+   + +    +    
Sbjct: 500 KQMCIAGDMESVFEIGPVFRAEESNTHRHLTEFVGLDFEKTFQSHYHEVLEFAEDLLVFV 559

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
               +  F  +                    +   +     +    +    +   +  + 
Sbjct: 560 LSELKIRFKKEIEVIQRSYPKAGDFRLPKDGKALRLKYMEGVALLKEAGVDVTEQERFEN 619

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFE 263
            +  A +     I                   +LD++P           P DP F+  ++
Sbjct: 620 DLSTAMEKQLGRIIREKYD---------TDFYVLDKFPMAVRPFYTKPCPDDPTFSNSYD 670

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
            +    E+ +    + +  E       E     K  +      ED++       P  +G 
Sbjct: 671 FFMRGEEIMSGAQRINEAKEL------EAAMSAKGLDPNAEGFEDYIGAFRQGCPPHAGG 724

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFS 348
            +G +R+VM   G  NI      P  
Sbjct: 725 GLGLNRIVMFFLGLPNIRLATLFPRD 750


>gi|157872175|ref|XP_001684636.1| aspartyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68127706|emb|CAJ05889.1| putative aspartyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 550

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 116/349 (33%), Gaps = 35/349 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
                ++ +    R++ ++  F EI S  +  +P +E     F  E     +  +  YL 
Sbjct: 211 AIFRLQSRVCQYFRQFLIDKDFCEIHSPKIINAP-SEGGANVFKLE-----YFNRFAYLA 264

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            SP+   + +L     ++F     +R+       H  EF  L+     + +   + D   
Sbjct: 265 QSPQLYKQMVLQGDVPRVFEVGPVFRSENSNTHRHLTEFVGLDVEMRIDEHYYEVLDVAE 324

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
            +            + +  N       E +       R   + +G   +     D+    
Sbjct: 325 SLFNYIFERLATH-TKELKNVCQQYPFEPLVWKLTPERIKELGVGVISEGVVPTDKFQAR 383

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC-----------------CTILDRY 241
           +    + +   +     ++ + +L EK+ P   IN                    I DR+
Sbjct: 384 VHNMDSRMLRINYMHCIELLNTVLDEKMAPTDDINTTNEKLLGKLVKERYGTDFFISDRF 443

Query: 242 PAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P+       +    D RFT  ++++    E+ +    + DP     R        K +  
Sbjct: 444 PSSARPFYTMECKDDVRFTNSYDMFIRGEEISSGAQRIHDPDLLLAR-------AKMLNV 496

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  PI E ++           G  +G +R+VML  G +N+      P  
Sbjct: 497 DLTPIKE-YVDSFRLGAWPHGGFGIGLERVVMLYLGLSNVRLASLFPRD 544


>gi|224367788|ref|YP_002601951.1| asparaginyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|223690504|gb|ACN13787.1| AsnS [Desulfobacterium autotrophicum HRM2]
          Length = 460

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 103/354 (29%), Gaps = 39/354 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRA 61
            H R R          R+ +  ++  ++ +  F  + +  +  S      +    T +  
Sbjct: 121 AHLRPRTNKFGAIFRIRSEVIQAIHMFYRDRGFYCLSAPVITGSDCEGAGDMFRVTSLDP 180

Query: 62  FSTELIIQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQP 115
                  + +  +  +     L  S + S +    +    ++ F   +R        H  
Sbjct: 181 AEVARQGRMNFNEDFFGTQANLTVSGQLSAEMFALS-LGDVYTFGPTFRAENSNTSRHVA 239

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF MLE   A    +  M     +++       + +      + + F++    +      
Sbjct: 240 EFWMLEPEMAFCDLDGNMDHGEELVK----ALTRHVMEHCAEDLSLFTKFVDKS------ 289

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
               +         ++          Q++G +                  +         
Sbjct: 290 -LGGMLDTLVEQPYERVTYDEGVEILQKSGRKFEFPVDNGMDLQSEHERFLAEEYFKKPL 348

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
             L  YP            D R     +L    I       EL+   ++  R +   +  
Sbjct: 349 -FLTNYPKDIKPFYMRQNDDGRTVAAVDLLVPRI------GELIGGSQREERLDHLERRM 401

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++          +L          SG  MGF+R +ML+TG  NI +V+  P +
Sbjct: 402 DEMGLSKADY-WWYLDSRRFGTVSHSGFGMGFERFLMLITGITNIRDVVPFPRT 454


>gi|167632830|ref|ZP_02391156.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|254743599|ref|ZP_05201284.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167531642|gb|EDR94307.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442]
          Length = 432

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQEILKSKYCKESPVGDLDTEG-EKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNNENSAITDSFDLLYKGLEITSGAQRIHNYEMLLDSF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|315038481|ref|YP_004032049.1| asparaginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276614|gb|ADQ59254.1| asparaginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|327183675|gb|AEA32122.1| asparaginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 432

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/350 (17%), Positives = 101/350 (28%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDHRHLWLRSK--KPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   D+     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVDYFDYDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +    K                     E   +    D
Sbjct: 226 PEMAWMHQDESLDIQERYLAYMVKQVLDKN--------------------EYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFTRLPYDDAVKMLQDAGRDFKWGDDFGAPDEGYISEQY--DRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P            D                     E+    E+   +E  K+      + 
Sbjct: 324 PTSIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEVLKQQILAAGLN 379

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  MGF+R +  V   ++I E I  P  
Sbjct: 380 LEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPRL 426


>gi|71893765|ref|YP_279211.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|123734333|sp|Q4A9S1|SYN_MYCHJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|71851892|gb|AAZ44500.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 449

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 66/352 (18%), Positives = 119/352 (33%), Gaps = 30/352 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           + Q+P   + +R   +R    +  R+ +   + ++F    FI   +  L  +   E    
Sbjct: 118 LRQMP--HFRHRSRLFRV--IMKLRSALFFEIHKFFRRQGFINFSAPILTSND-GEGAGE 172

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F  +   +D   K   L  + +   +       +K++ FA  +R        H  EF M
Sbjct: 173 VFIVDDENKDFFNKKTTLGVTGQLHAEAYALG-FKKVYTFAPTFRAERSNTRRHAAEFWM 231

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   A  +          II  A ++  + I S    N + F   E         R   
Sbjct: 232 IEPEVAFFT-------LEQIIELAVKLLQKVIKSVIIRNKDEFIFLEKAGDKNLRKRLLQ 284

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                      +    LL    ++       D  +           +   +      ++ 
Sbjct: 285 FCDSQVTQISYEKAIELLLEHQEKFE---EKDLFFGCDLKTEHERFLTEEIFHMPV-VII 340

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            YP    A       D +    F+L    I       EL+   ++  R+E   +   ++ 
Sbjct: 341 NYPKNLKAFYMHQNEDGQTVAAFDLLVPGI------GELIGGSQREVRYE---KLLARMS 391

Query: 300 NETYPIDED--FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                I+E   +L       P SSG  +GF+RL+M +TG  NI +VI  P +
Sbjct: 392 ELNMNIEEFQWYLDLRKYGNPGSSGFGLGFERLLMYITGIENIRDVIPFPRT 443


>gi|315224653|ref|ZP_07866476.1| asparagine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314945281|gb|EFS97307.1| asparagine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 476

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 117/379 (30%), Gaps = 48/379 (12%)

Query: 5   PSQP---WWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +   + H R R       +  R+ +  ++ +YF +N F  +++  +  S    
Sbjct: 105 PKKHSLEFLRENAHLRVRSSTFSAVMRVRSTLAFAIHKYFQDNGFFYVNTPIITGSDAEG 164

Query: 56  ETHIRAFSTELIIQDHIR--------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAH 102
              +   +T       +         K  +     L  S +    +  A    KI+ F  
Sbjct: 165 AGEMFRVTTLDAKNPPLNENGEVDYKKDFFGRETNLTVSGQL-EGETFAMALGKIYTFGP 223

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A       M    + I+   +   +            
Sbjct: 224 TFRAENSNTSRHLAEFWMIEPEMAFYDLIDNMNLAEDFIKYVLQYTLEVRRDDLEFLNKR 283

Query: 162 FSEPEYITVAEAFA--------RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
           F E E        +         +   +    +   +  D        ++   +   ++ 
Sbjct: 284 FLEEEKTKPQNERSTMSLIEKLEFVIHNQFKRVSYTEAIDILKNSNHNKKKKFQYPVNEW 343

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
             D+ S      +E +    C  IL  YPA   A       D +  +  ++    I    
Sbjct: 344 GVDLQSEHERYLVEKH--FECPVILYDYPANIKAFYMRLNEDGKTVRAMDILFPGIGEIV 401

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNET---YPID-EDFLACLTEMPQSSGIAMGFDRL 329
              +  +  +         +      +E    + +D   F   +      SG  +GF+RL
Sbjct: 402 GGSQREERYDVLK-----QKIADLHMDEATLWWYLDLRKFGTAV-----HSGFGLGFERL 451

Query: 330 VMLVTGANNINEVIWTPFS 348
           V+  TG  NI +VI  P +
Sbjct: 452 VLFATGMANIRDVIPYPRT 470


>gi|171679499|ref|XP_001904696.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939375|emb|CAP64603.1| unnamed protein product [Podospora anserina S mat+]
          Length = 542

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 99/383 (25%), Gaps = 53/383 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--- 52
           +  +P         H R R       L  R+   +SL ++F    F++     +  S   
Sbjct: 170 LRTLP---------HLRPRTPLNALLLRLRSEAVTSLTQFFARQDFVQTHPPIITSSDCE 220

Query: 53  ---------PGNETHIRAFSTELIIQDHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
                    P N+T  +        QD   R   YL  S +    + LA     ++  + 
Sbjct: 221 GAGEVFTLNPANDTAGQPGKESADSQDSFFRSKKYLTVSTQLHL-EALAQSVGNVWTLSP 279

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R  +     H  EF MLE   +       + D    +          ++    V    
Sbjct: 280 VFRAEQSDTSRHLSEFYMLEAEMSFVDDMNSVMDLAEDM---MRQLGTDLYQSDTVKSLL 336

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
              P +               G    +  +          +Q   +  H   W       
Sbjct: 337 TRTPHFGQDLAPAEEVDRRWQGLMQPDWPRITYTEAIDILKQHEDKFEHKPVWGAGLQSE 396

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR--------FELYACNIELCN 273
             + I   +G +    +  YP    A        P               L     E+  
Sbjct: 397 HEKFIASTVGKDRPVFVTNYPRDIKAFYMRPTRGPGSEDPSRVTVDCFDLLVPELCEIAG 456

Query: 274 ACDELLDPIEQRHRFEKEMQEK---------KKIYNETYPIDEDFLACLTEMPQSSGIAM 324
                           ++   K                +  D          P   G  +
Sbjct: 457 GSMREHQLEPLLDIMTRQGIIKSPSETASEDDSGNGLQWYADLR----RWGCPPHGGFGL 512

Query: 325 GFDRLVMLVTGANNINEVIWTPF 347
           GFDRL+  ++G   + +++  P 
Sbjct: 513 GFDRLLSYLSGVQTVRDIVSFPR 535


>gi|48478484|ref|YP_024190.1| asparaginyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48431132|gb|AAT43997.1| asparaginyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 427

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 109/350 (31%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           + ++  W R   +     L  R+ +  +  ++F  N + ++    +  +   G  T    
Sbjct: 112 LDNRHLWLRSREFTS--ILKIRSTVFKAFADFFYNNGYYQVQGPMMVSTATEGGAT---- 165

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L         +YL  S +F  + ++ +  EK+F  A ++R  +     H  E+   
Sbjct: 166 ----LFKLKFFDDDVYLTQSSQFYLETMIFS-LEKVFTIAPSFRAEKSRTRRHLSEYWHA 220

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A    + +M     +I         K      +     S+ E I       +Y + 
Sbjct: 221 EGEAAWLHNDDMMNVEEKMIEYIVSEVLNKNEKDLKLINRDISKLERIKAPFPRIKYRD- 279

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                           L  ++++ G+ + + D         ++   E          +  
Sbjct: 280 ----------------LINKSREFGMNLKYGDDLGADEEYNIMIHYEK------PLFVTN 317

Query: 241 YPAPESALAN-IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YP       +   P +P      +L A                    R ++ ++  KK  
Sbjct: 318 YPEELKTFYHLPDPENPGEILCHDLLAPEGYGEIIGGGERIW-----RLDELLERMKKAG 372

Query: 300 NETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                    ++          SG  +G DRLV  +   NNI + I  P +
Sbjct: 373 LPEEDY-YWYIDLRRYGSVPHSGFGLGLDRLVNWICNLNNIRDAIPYPRT 421


>gi|317495209|ref|ZP_07953579.1| asparaginyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914631|gb|EFV36107.1| asparaginyl-tRNA synthetase [Gemella moribillum M424]
          Length = 428

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 59/349 (16%), Positives = 111/349 (31%), Gaps = 46/349 (13%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
           ++  W R    ++   L  RN I  +  ++F +  FI+ D   L  S P         +T
Sbjct: 114 NRHIWIRSK--KQHAILTIRNQIIKATYDFFEKEGFIKTDPPILTSSAPEG-------TT 164

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           EL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E  
Sbjct: 165 ELFNTKYFDEEAYLSQSGQLYL-EATAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEAE 223

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A  ++ + +      +        +K                     +   +    DL 
Sbjct: 224 MAFCNHAESLALQEAYVNYLLTEVLEKC--------------------QEQLKILGRDLE 263

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
              +   +  R       +        D  + D F       I      N    +  +P 
Sbjct: 264 ALNNARGEFPRIRYKDAIKLLKDNGFDDIEYGDDFGSPHETFIA--NSYNKPVFITHWPL 321

Query: 244 PESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                  I  P +P      +L A          E++   ++   ++K ++  KK     
Sbjct: 322 DIKPFYMIEDPEEPGVVLCADLIAP-----EGYGEIIGGSQRIDDYDKLLENIKKHDL-- 374

Query: 303 YPIDE--DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +D    +L        + +G  +G +R V  +TG  ++ E +  P  
Sbjct: 375 -NLDAYGWYLDLRKYGSVEHAGFGLGLERTVAWITGNGHVRETVPFPRL 422


>gi|32491012|ref|NP_871266.1| asparaginyl-tRNA synthetase [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340439|sp|Q8D2U1|SYN_WIGBR RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|25166218|dbj|BAC24409.1| asnS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 466

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/370 (17%), Positives = 105/370 (28%), Gaps = 45/370 (12%)

Query: 3   QIPSQPWWNRDF----HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYSP 53
            I S+P          H R R  +       RN+I   +  +  +  FI + S  +    
Sbjct: 110 PISSKPHTLEYLRSFSHLRPRTNIIGSVSRIRNIIFQEVHNFLNKKGFIWVPSPIITSL- 168

Query: 54  GNETHIRAFSTELIIQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIF 98
             E     F                      D   K  +L  S +   +    +   K++
Sbjct: 169 NTEGSGEMFKVSTFDFKKIPLNKNKLINYRKDFFGKRTFLTVSGQLHIESYACS-LSKVY 227

Query: 99  CFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
            F   +R        H  EF M+E   A      ++    N++    +    K  +    
Sbjct: 228 TFGPTFRAENSNTSRHLAEFWMVEIEIAFAKLNDIILLAYNLLSNIFKKVLNKCLNDLIF 287

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
                   E         +  N      ++        +L    +   I++      S  
Sbjct: 288 -------LEKKLNINIIKKLKNFIEKKLIEVEYCEAIRILKNCEKNFRIQLKWGMDLSSE 340

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             R L +    +  +        YP    A       D +     ++    I       E
Sbjct: 341 HERYLSDLYYKSHIVIK-----NYPKEIKAFYMRLNKDKKTVAAADILLPGIGEIIGGSE 395

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
             D +E      KE +   K Y   +  D   L         SG  +G +RL+  VTG  
Sbjct: 396 REDRLEYLDSMIKEKRLIHKNYE--WYRD---LRK-YGTVPHSGFGLGIERLISYVTGLK 449

Query: 338 NINEVIWTPF 347
           NI +VI  P 
Sbjct: 450 NIRDVIPFPR 459


>gi|68070733|ref|XP_677278.1| asparagine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56497329|emb|CAH99886.1| asparagine--tRNA ligase, putative [Plasmodium berghei]
          Length = 574

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 109/401 (27%), Gaps = 77/401 (19%)

Query: 3   QIPSQPWW---NRDF-HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +       R+  H R R       +  RN +  S   +F    FI I +  +  S 
Sbjct: 188 PLSKKNHGKEFLREVAHLRPRSYFISSVMRIRNALMLSTHLFFQSRGFICIHTPLITASD 247

Query: 53  PGNETHIRAFSTELIIQ------------------------------------------- 69
                 +   +T                                                
Sbjct: 248 CEGGGEMFTVTTLFNEHGDISSIPKTKKKINNNETGKREDKNTNELETNNTNQYIVDFKK 307

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   K  +L  S + S +  L +    ++ F   +R        H  EF M+E   A   
Sbjct: 308 DFFSKQAFLTVSGQLSLEN-LCSSMGDVYTFGPTFRAENSHTSRHLAEFWMIEPEMAFAD 366

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
               M+     I+           +    +   F E     + E      N D       
Sbjct: 367 IYDNMELAEAYIKYCIRYV----LNNNFHDIYYFEENVEKGLIERLKNILNDDFAKITY- 421

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                  LL   +    I V     W           I   +      I+  YP    A 
Sbjct: 422 --TNAIELLTKYSNNFDIPVK----WGMDLQSEHERFISEQIFKKPV-IVYNYPKDLKAF 474

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                 D +     ++    I       +  D +E   +   E    KK+  E+Y     
Sbjct: 475 YMKLNDDNKTVAAMDVLVPKIGEVIGGSQREDNLELLDKMIIE----KKLNIESY----W 526

Query: 309 FLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +   L        SG  +GF+RL+MLVTG +NI + I  P 
Sbjct: 527 WYRQLRKYGTHPHSGFGLGFERLIMLVTGVDNIKDTIPFPR 567


>gi|328948871|ref|YP_004366208.1| asparaginyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328449195|gb|AEB14911.1| Asparaginyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 486

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 59/367 (16%), Positives = 110/367 (29%), Gaps = 49/367 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSM------------SLQYSP--- 53
            H R R          RN +  ++  +F E  F  I++               Q +    
Sbjct: 129 AHLRARTNTFGAVYRVRNQMAFAVHSFFQERGFQYINAPEITCSDCEGAGEMFQVTTLSM 188

Query: 54  ---------GNETHIRAFSTE---LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
                         ++           +D   K   L  S +   + +  A   +++ F 
Sbjct: 189 EKIAELGVKAGAGGMKIEDAHKIVDYSKDFFGKKASLTVSGQLEAETMATA-LSRVYTFG 247

Query: 102 HAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
             +R        H  EF M+E   A    +  M    + ++     A  K  S    +  
Sbjct: 248 PTFRAENSNTPRHLAEFWMIEPEMAFFDLDDDMDIQEDFVKYLLNWALTKCRS----DLE 303

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
            F +     + E+  + A              D      +A++ G +      W    + 
Sbjct: 304 FFDKRIQPGLIESLEKVAKAKFVRISY----TDAIAKLEEAEKNGAKFEFKPYWGCDIAT 359

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
                +   +   C  ++  YP    +       D +  K  ++    I       E  +
Sbjct: 360 EHERYLTEKI-FGCPVMVFNYPKEIKSFYMKQNDDGKTVKAVDVLVPGIGELIGGSEREE 418

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
             E     +   + K  + N  + +D   L         SG  +GF+RL+  +TG  NI 
Sbjct: 419 NYE--KLLKACEERKMDMSNYQWYLD---LRRF-GTVPHSGFGLGFERLIRYITGMENIR 472

Query: 341 EVIWTPF 347
           +VI  P 
Sbjct: 473 DVIPYPR 479


>gi|325089080|gb|EGC42390.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 994

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 99/326 (30%), Gaps = 24/326 (7%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           + +     EY +++    I +  L  +  +E     F        + ++  YL  SP+  
Sbjct: 684 SGVAQLFMEYMLKSGSRWISTPKLTANA-SEGGAGVFEVT-----YFKRKAYLAQSPQLY 737

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
            +  +A   E +F     +R  E     H  EF  L++ +  +S+   + +    +    
Sbjct: 738 KQMCIAGDMESVFEIGPVFRAEESNTHRHLTEFVGLDFEKTFQSHYHEVLEFAEDLLVFI 797

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
               +  F  +                    +   +     +    +    +   +  + 
Sbjct: 798 LSELKIRFKKEIEVIQRSYPKAGDFRLPKDGKALRLKYMEGVALLKEAGVDVTEQERFEN 857

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFE 263
            +  A +     I                   +LD++P           P DP F+  ++
Sbjct: 858 DLSTAMEKQLGRIIREKYD---------TDFYVLDKFPMAVRPFYTKPCPDDPTFSNSYD 908

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
            +    E+ +    + +  E       E     K  +      ED++       P  +G 
Sbjct: 909 FFMRGEEIMSGAQRINEAKEL------EAAMSAKGIDPNAEGFEDYIGAFRQGCPPHAGG 962

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFS 348
            +G +R+VM   G  NI      P  
Sbjct: 963 GLGLNRIVMFFLGLPNIRLATLFPRD 988


>gi|309359933|emb|CAP32090.2| CBR-NARS-2 protein [Caenorhabditis briggsae AF16]
          Length = 426

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 105/350 (30%), Gaps = 48/350 (13%)

Query: 11  NRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFS 63
            +  H R R      FL  R+ I     E+F+   FI ID+  L  +   G        +
Sbjct: 105 RKKTHLRARNVQFAAFLRLRSTIFRETHEFFMSRDFIHIDTPKLTRNDCEGGGEVFDVVT 164

Query: 64  TELIIQDHIRK----PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFT 118
           T     +        P+YL  S +    + L +  ++++    A+R   +Q   H  EF 
Sbjct: 165 TSSEALNGSEGVKEDPIYLSVSSQLHL-EALVSRLQRVYTLGPAFRAEKQQSHAHLSEFH 223

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           MLE   A       M + +                   +          +     F+R  
Sbjct: 224 MLEAEVAFVETIDEMCELVESYVQHMFSLLDSPKFQTELKIVGSEPTSPVPTNSKFSRIT 283

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D    L +              ++G+   ++       + +                +
Sbjct: 284 YDDAVKLLTS-------KGSKVTAKSGLSKKNELDLVKYHNNL-------------PVFV 323

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKK 297
             YP  +         D   T  F+L    + EL        D            + K +
Sbjct: 324 THYPTNQKPFYMARTKDETSTLSFDLLVPGVGELAGGSVREPDAE----------KLKSR 373

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                + +D          P ++G  +GF+RL+  + G  NI + +  P 
Sbjct: 374 GCGIEWYLDTR----RRGQPPTAGFGIGFERLLQYMLGIQNIKDTLAFPR 419


>gi|240280665|gb|EER44169.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 1008

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 99/326 (30%), Gaps = 24/326 (7%)

Query: 26   NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
            + +     EY +++    I +  L  +  +E     F        + ++  YL  SP+  
Sbjct: 698  SGVAQLFMEYMLKSGSRWISTPKLTANA-SEGGAGVFEVT-----YFKRKAYLAQSPQLY 751

Query: 86   CKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
             +  +A   E +F     +R  E     H  EF  L++ +  +S+   + +    +    
Sbjct: 752  KQMCIAGDMESVFEIGPVFRAEESNTHRHLTEFVGLDFEKTFQSHYHEVLEFAEDLLVFI 811

Query: 145  EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
                +  F  +                    +   +     +    +    +   +  + 
Sbjct: 812  LSELKIRFKKEIEVIQRSYPKAGDFRLPKDGKALRLKYMEGVALLKEAGVDVTEQERFEN 871

Query: 205  GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFE 263
             +  A +     I                   +LD++P           P DP F+  ++
Sbjct: 872  DLSTAMEKQLGRIIREKYD---------TDFYVLDKFPMAVRPFYTKPCPDDPTFSNSYD 922

Query: 264  LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
             +    E+ +    + +  E       E     K  +      ED++       P  +G 
Sbjct: 923  FFMRGEEIMSGAQRINEAKEL------EAAMSAKGIDPNAEGFEDYIGAFRQGCPPHAGG 976

Query: 323  AMGFDRLVMLVTGANNINEVIWTPFS 348
             +G +R+VM   G  NI      P  
Sbjct: 977  GLGLNRIVMFFLGLPNIRLATLFPRD 1002


>gi|225560791|gb|EEH09072.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 1009

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 99/326 (30%), Gaps = 24/326 (7%)

Query: 26   NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
            + +     EY +++    I +  L  +  +E     F        + ++  YL  SP+  
Sbjct: 699  SGVAQLFMEYMLKSGSRWISTPKLTANA-SEGGAGVFEVT-----YFKRKAYLAQSPQLY 752

Query: 86   CKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
             +  +A   E +F     +R  E     H  EF  L++ +  +S+   + +    +    
Sbjct: 753  KQMCIAGDMESVFEIGPVFRAEESNTHRHLTEFVGLDFEKTFQSHYHEVLEFAEDLLVFI 812

Query: 145  EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
                +  F  +                    +   +     +    +    +   +  + 
Sbjct: 813  LSELKIRFKKEIEVIQRSYPKAGDFRLPKDGKALRLKYMEGVALLKEAGVDVTEQERFEN 872

Query: 205  GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFE 263
             +  A +     I                   +LD++P           P DP F+  ++
Sbjct: 873  DLSTAMEKQLGRIIREKYD---------TDFYVLDKFPMAVRPFYTKPCPDDPTFSNSYD 923

Query: 264  LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
             +    E+ +    + +  E       E     K  +      ED++       P  +G 
Sbjct: 924  FFMRGEEIMSGAQRINEAKEL------EAAMSAKGIDPNAEGFEDYIGAFRQGCPPHAGG 977

Query: 323  AMGFDRLVMLVTGANNINEVIWTPFS 348
             +G +R+VM   G  NI      P  
Sbjct: 978  GLGLNRIVMFFLGLPNIRLATLFPRD 1003


>gi|328868550|gb|EGG16928.1| asparagine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 512

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 55/362 (15%), Positives = 116/362 (32%), Gaps = 60/362 (16%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI------ 59
            H R R       +  RN   S +  YF + QF  + +  +  S    G E         
Sbjct: 176 AHLRSRSNTIGAMIRVRNESTSLIHTYFQDRQFQHVHTPLITASDCEGGGEQFAISTPVN 235

Query: 60  ---------RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
                    +A +T  +      +P YL  S +   +   ++   +++ F  ++R  +  
Sbjct: 236 HPNNNKENNKATTTPAVNH-FFGEPAYLTVSGQLEAEIFASSHS-RVYTFGPSFRAEKSN 293

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   +  + +  +    + ++   +                        
Sbjct: 294 TTRHLSEFWMVEPEMSFINMQDNLDIAEDFLKYTIQHLMT-------------------N 334

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +    +  ++   T      P    + +  +Q   + A+   W +  SR   + +  +
Sbjct: 335 CKDDMEFFNKLEKTLTNRFVRLPYTEAIDILTKQTSTKFANPIKWGEDLSREHEKYLTSH 394

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
            G      +  +P            D +     +L    +       EL+    +  R++
Sbjct: 395 FGDIPV-FVINWPKDIKPFYMRENDDGQTVANMDLLVPEV------GELIGGSIREERYD 447

Query: 290 KEMQEKKKIYNET----YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             ++   K+  +     + +D   L          G  +GF+R +  VTG  NI +VI  
Sbjct: 448 HLVKRLNKLDMDQDVYGWYMD---LRK-YGSAPHGGFGLGFERFLQYVTGLQNIRDVIPI 503

Query: 346 PF 347
           P 
Sbjct: 504 PR 505


>gi|262165551|ref|ZP_06033288.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262025267|gb|EEY43935.1| asparaginyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 414

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 108/360 (30%), Gaps = 49/360 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 73  AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 130

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  +L  S + + +    A   K++ F   +R       
Sbjct: 131 DMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNGEAYACA-LSKVYTFGPTFRAENSNTS 189

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +    +  +   F++     V 
Sbjct: 190 RHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVI 245

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++ + D           D        +  G        W    +      +     
Sbjct: 246 ARLEKFVDSDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 298

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 299 KAPVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 351

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 352 DARMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 408


>gi|118085208|ref|XP_417219.2| PREDICTED: similar to Asparaginyl-tRNA synthetase 2
           (mitochondrial)(putative) [Gallus gallus]
          Length = 478

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 98/351 (27%), Gaps = 34/351 (9%)

Query: 11  NRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
                 R       L  R+   +++  +F +N ++ I +  +  +       +    T  
Sbjct: 141 FPHLRCRTNAVGALLRIRSEATAAIHSFFQDNGYVHIHTPIITSNDCEGAGDLFQIETSH 200

Query: 67  IIQDH------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
             ++          P +L  S +    ++++    ++F F   +R        H  EF M
Sbjct: 201 EAKEAAEKNHFFNVPTFLTVSGQLHL-EVMSGAFTRVFTFGPTFRAENSQSRRHLAEFYM 259

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   +     Q +   M  +   A               + +  P      E   +   
Sbjct: 260 VEAELSFTESLQDIMQVMEDLFKTATSTLFSKCPRDVELFHKYVAPAQKGRLEQMLKNKF 319

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +              +      +QA         W         + +  + G      + 
Sbjct: 320 V----------TISYNEAVEILKQASQTFTFKPEWGCDLQTEHEKYLVKHCGEVPV-FVI 368

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR--FEKEMQEKKK 297
            YP            D        +      L     EL     +  R  F +   ++  
Sbjct: 369 NYPYDLKPFYMRDNEDGPQRTVAAV----DLLVPGIGELCGGSLREERLPFLESRLQRLG 424

Query: 298 I-YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +     + +D   L          G  MGF+R +  + G +NI +VI  P 
Sbjct: 425 LADTYQWYLD---LRKF-GSVPHGGFGMGFERYLQYILGVDNIKDVIPFPR 471


>gi|330836851|ref|YP_004411492.1| Asparaginyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748754|gb|AEC02110.1| Asparaginyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 463

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 102/356 (28%), Gaps = 43/356 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       +  RN +  ++  +F E  F+ +++  +  +           +T  +
Sbjct: 122 AHLRPRTNLMGAVMRVRNTMAYAVHTFFQERGFVYVNTPLISTADAEGAGEQFHVTTLDL 181

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   K   L  S +   +    A  + I+ F   +R        H
Sbjct: 182 DHIPRTADGAVDYTKDFFGKMAKLTVSGQLEGETYAMA-LKNIYTFGPTFRAENSNTTRH 240

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M+     +        +K     N+           T+ + 
Sbjct: 241 LAEFWMIEPEMAFCDLEGNMQIAEEFLTYVLRTVLEKHEDDMNLFSQFVEPGLKDTLWQV 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                 I+              L      +   +  +  +W           +   +   
Sbjct: 301 ------IEAPFAHMTYTDAIAELS-----KNNNKFEYPVSWGSDMQSEHERFLTETVWKR 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              I+  YP    A       D +  +  ++ A  + E+    +          R  +  
Sbjct: 350 PV-IVTDYPKEIKAFYMKLNDDGKTVRGMDVLAPRLGEIIGGSEREARVDVLEERMRECN 408

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                +  E Y     +L          +G  +GF+R V  VTG  NI +VI  P 
Sbjct: 409 -----LNPENY---WWYLDLRRFGTVPHAGFGLGFERAVRYVTGMQNIRDVIPFPR 456


>gi|254507050|ref|ZP_05119188.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219550045|gb|EED27032.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 466

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  F  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTDKGDVDYNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +   ++             + + IT  
Sbjct: 242 RHLAEFWMVEPEVAFADLNDIAKLSEDMLKFVFKAVLEECRDDLEFFAQRIDK-QAITRL 300

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D          +G        W    S      +     
Sbjct: 301 EQF----------VSSDFAQVDYTDAIQILLDSGKEFEFPVEWGIDMSSEHERYLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R E  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRANDDGKTVAAM------DVLAPGIGEIIGGSQREERLEIL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DERMREVGIDPEHMNWYRDLRK-YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|196034019|ref|ZP_03101430.1| aspartyl-tRNA synthetase [Bacillus cereus W]
 gi|228945810|ref|ZP_04108156.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|195993699|gb|EDX57656.1| aspartyl-tRNA synthetase [Bacillus cereus W]
 gi|228813875|gb|EEM60150.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 432

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQEILKSKYCKESPVGDLDTEG-EKLLGKYVKETYKSE-FVFIIHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNNENSSITDSFDLLYKGLEITSGAQRIHNYEMLLASF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|281421746|ref|ZP_06252745.1| asparagine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281404241|gb|EFB34921.1| asparagine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 475

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 107/357 (29%), Gaps = 32/357 (8%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       +  R+ +  ++  YF E+ +   ++  +  S       +   +T+ +
Sbjct: 123 AHLRLRTNTFGAVMRIRHNMAMAIHTYFHEHGYFYFNTPLITASDCEGAGQMFQVTTKNL 182

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                          D   K   L  S +   +    A    I+ F   +R        H
Sbjct: 183 YNLKKTEDGKIDYSDDFFGKQTSLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPRH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + LM+   + I+     A +              +         
Sbjct: 242 LAEFWMVEPEVAFLDMDGLMELEEDFIKYCIRWALEHCKDDLAFLNKMIDKG-------L 294

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
            AR   +     +  P      +L   A   G +      W D  +      +       
Sbjct: 295 IARLEGVLNSDFVHLPYTEGIRILQE-AIANGKKFEFPCEWGDDLASEHERFLVEEH-FK 352

Query: 234 CCTILDRYPAPESALANIYPADP--RFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
              I+  YP    A       +      K  +       L     E++    +   ++K 
Sbjct: 353 RPVIMTNYPKAIKAFYMKIDEEESGFGGKSGQTVQGTDVLFPQIGEIIGGSVREESYDKL 412

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           M E +        ++             +G  +GF+RL++ VTG  NI +VI  P +
Sbjct: 413 MGEIEARNIPMKDMNWYLDTRKYGSCPHAGFGLGFERLILFVTGMQNIRDVIPFPRT 469


>gi|323492435|ref|ZP_08097583.1| asparaginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323313222|gb|EGA66338.1| asparaginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 466

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTDKGDVDYNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +   ++             + E IT  
Sbjct: 242 RHLAEFWMVEPEVAFADLNDVAKLSEDMLKYVFKAVLEERRDDLEFFAQRIDK-EAITRL 300

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D          +G        W    S      +     
Sbjct: 301 EQF----------VSSDFAQVDYTDAIQILLDSGREFEFPVEWGIDMSSEHERYLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                +   YP    A       D +             L     E++   ++  R E  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLEVL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DARMREMGIDPEHMSWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|169775127|ref|XP_001822031.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|238496255|ref|XP_002379363.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus flavus
           NRRL3357]
 gi|83769894|dbj|BAE60029.1| unnamed protein product [Aspergillus oryzae]
 gi|220694243|gb|EED50587.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus flavus
           NRRL3357]
          Length = 557

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 105/321 (32%), Gaps = 30/321 (9%)

Query: 34  EYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
           EY +++    I +  L  S   E     F  +   ++      YL  SP+   +  +A  
Sbjct: 255 EYMIKSGSRWIFTPKLVSSA-TEGGSNVFEVKYFKRNG-----YLAQSPQLYKQMCIAGD 308

Query: 94  EEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
            E +F  A  +R  +     H  EF+ L++ +    +   + D    +        ++ +
Sbjct: 309 MESVFEIAPVFRAEDSNTHRHLTEFSGLDFEKTFHGHYHEVLDFAEDLLVFILTQLKERY 368

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
             Q                      A            + +        ++AG+ V+  +
Sbjct: 369 KDQIAVIQKSYP------------KAGDFKLPKDGKALRLNYMDGVALLKEAGVDVSEQE 416

Query: 213 TWSDIFSRILIEK---IEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACN 268
            + + FS  + ++   I          +LD++P           P D RF+  ++ +   
Sbjct: 417 RFENDFSTAMEKQLGQIIREKYDTDFYVLDKFPMAVRPFYTKADPKDARFSNSYDFFMRG 476

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFD 327
            E+ +    + D  E           + K  N      ED+L       P  +G  +G +
Sbjct: 477 EEIMSGAQRINDVNELME------SMRAKGINPDQEGFEDYLNAFRQGCPPHAGGGLGLN 530

Query: 328 RLVMLVTGANNINEVIWTPFS 348
           R+VM   G  N+      P  
Sbjct: 531 RIVMFFLGLPNVRLATLFPRD 551


>gi|268572787|ref|XP_002641412.1| Hypothetical protein CBG13278 [Caenorhabditis briggsae]
          Length = 397

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 105/350 (30%), Gaps = 48/350 (13%)

Query: 11  NRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFS 63
            +  H R R      FL  R+ I     E+F+   FI ID+  L  +   G        +
Sbjct: 76  RKKTHLRARNVQFAAFLRLRSTIFRETHEFFMSRDFIHIDTPKLTRNDCEGGGEVFDVVT 135

Query: 64  TELIIQDHIRK----PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFT 118
           T     +        P+YL  S +    + L +  ++++    A+R   +Q   H  EF 
Sbjct: 136 TSSEALNGSEGVKEDPIYLSVSSQLHL-EALVSRLQRVYTLGPAFRAEKQQSHAHLSEFH 194

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           MLE   A       M + +                   +          +     F+R  
Sbjct: 195 MLEAEVAFVETIDEMCELVESYVQHMFSLLDSPKFQTELKIVGSEPTSPVPTNSKFSRIT 254

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D    L +              ++G+   ++       + +                +
Sbjct: 255 YDDAVKLLTS-------KGSKVTAKSGLSKKNELDLVKYHNNL-------------PVFV 294

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKK 297
             YP  +         D   T  F+L    + EL        D            + K +
Sbjct: 295 THYPTNQKPFYMARTKDETSTLSFDLLVPGVGELAGGSVREPDAE----------KLKSR 344

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                + +D          P ++G  +GF+RL+  + G  NI + +  P 
Sbjct: 345 GCGIEWYLDTR----RRGQPPTAGFGIGFERLLQYMLGIQNIKDTLAFPR 390


>gi|42519125|ref|NP_965055.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|59798573|sp|Q74JA9|SYN_LACJO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|41583412|gb|AAS09021.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|329667340|gb|AEB93288.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 432

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 104/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           + ++  W R    R    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDNRHLWLRSK--RPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVEYFNNDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +                      +   E   +    D
Sbjct: 226 PEMAWMHQDESLDIQERYLAYMVKQV--------------------LENNEYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFTRLSYDDAIKMLQEAGRDIKWGDDFGAPDEGYISEQ--FDRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR---HRFEKEMQEKKKI 298
           P            D                     E+    E+       +++++E   +
Sbjct: 324 PTTIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEILKQQIEE-AGL 378

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y     +L          SG  MGF+R +  +   ++I E I  P  
Sbjct: 379 NLEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWICKLDHIREAIPFPRL 426


>gi|89097184|ref|ZP_01170074.1| asparaginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89088007|gb|EAR67118.1| asparaginyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 463

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++  +F E  FI   +  +  S       +  F    +
Sbjct: 122 AHLRPRTNTYSAVFRIRSLASYAIHNFFQEKGFIYAQTPVITGSDTEGAGEM--FRVTTM 179

Query: 68  IQD----------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +             K  +     L  S + S +    A  +K++ F   +R       
Sbjct: 180 DMNNVPKTDEGDVDFSKDFFNGEANLTVSGQLSAEAFALA-FQKVYTFGPTFRAENSNTT 238

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      ++     +I+   +    +           F+     T+ 
Sbjct: 239 RHAAEFWMVEPEVAFAELPDILDLAEAMIKHVIQYVLNEAPE----EITFFNSFIDKTLI 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E      N D                  Q +++G +  +   W           +   + 
Sbjct: 295 ERLNTALNTDYARVTYTD-------AIEQLKESGEKFEYQPEWGADLQTEHERYLSE-VI 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                 +  YP    A       D +     +L    I       +  +  E       E
Sbjct: 347 YKRPVFVTDYPKDIKAFYMRANDDGKTVAAADLLVPEIGELIGGSQREEREELLKERITE 406

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           M     +  + Y     +L        + SG  +GF+RL+M +TG  NI +VI  P +
Sbjct: 407 M----GMDLKDY---WWYLELRKYGETKHSGYGIGFERLIMYLTGMKNIRDVIPFPRT 457


>gi|238854245|ref|ZP_04644589.1| asparagine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238833056|gb|EEQ25349.1| asparagine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 432

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 104/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           + ++  W R    R    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDNRHLWLRSK--RPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVEYFNNDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +                      +   E   R    D
Sbjct: 226 PEMAWMHQDESLDIQERYLAYMVKQV--------------------LENNEYELRILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFTRLPYDDAIKMLQEAGRDIKWGDDFGAPDEGYISEQ--FDRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR---HRFEKEMQEKKKI 298
           P            D                     E+    E+       +K+++E   +
Sbjct: 324 PTTIKPFYMKKNHDNPKEYLCADVI----APEGYGEIFGGSEREGNYEILKKQIEE-AGL 378

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y     +L          SG  MGF+R +  +   ++I E I  P  
Sbjct: 379 NLEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWICKLDHIREAIPFPRL 426


>gi|291059980|gb|ADD72715.1| asparaginyl-tRNA synthetase [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 595

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 103/384 (26%), Gaps = 61/384 (15%)

Query: 13  DFHYRRRP-FL----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R+ +  ++  +F E  F  + +  +  S       +  F    
Sbjct: 219 HAHLRARTSTFAACARVRSALAGAVHRFFSERHFQYVHTPIITASDCEGAGEL--FRVTT 276

Query: 67  IIQ-----------------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHA 103
                                     D   K   L  S +   +    A   +I+ F   
Sbjct: 277 FDPVRIAREAHAAGAAGNPYALTYADDFFGKAARLTVSGQLQGEAYALA-LTRIYTFGPT 335

Query: 104 WRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           +R        H  EF M+E   A       M      +      A +             
Sbjct: 336 FRAENSNTSRHLSEFWMVEPEIAFARITDCMDVAEEFLAYLLRAALKDCAQDIAFLDERA 395

Query: 163 SEPEYI-----------TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA----GIR 207
           ++               T      R          D    P   L Y +A +     G  
Sbjct: 396 AQHARSARGDTPLAARSTARTPPVRTPGQLTRMLEDVARAPATRLTYTEAIKLLENSGRS 455

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                 W           +   +      I+  YP    A      AD    +  +L   
Sbjct: 456 FEFPVRWGCDLQSEHECFLTEEVFHGPV-IVYDYPKEIKAFYMKLNADGTTVRSMDLLVP 514

Query: 268 NIELCNACDELLDPIEQRHRFEKE-MQEKKKIYNETYPIDEDFLACLT--EMPQSSGIAM 324
            +       E++   E+  +FE    + +   ++   P D  +   L        +G  +
Sbjct: 515 GL------GEIMGGSEREEQFEVLCARIRASGFD---PHDYRWYTDLRRFGTAPHAGFGL 565

Query: 325 GFDRLVMLVTGANNINEVIWTPFS 348
           GF+RL+  VTG  NI +VI  P +
Sbjct: 566 GFERLLQYVTGLGNIRDVIPFPRT 589


>gi|300361733|ref|ZP_07057910.1| asparagine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354352|gb|EFJ70223.1| asparagine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 432

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 104/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           + ++  W R    R    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDNRHLWLRSK--RPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVEYFNNDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +                      +   E   R    D
Sbjct: 226 PEMAWMHQDESLDIQERYLAYMVKQV--------------------LENNEYELRILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFTRLPYDDAIKMLQEAGRDIKWGDDFGAPDEGYISEQ--FDRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR---HRFEKEMQEKKKI 298
           P            D                     E+    E+       +K+++E   +
Sbjct: 324 PTTIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEILKKQIEE-AGL 378

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y     +L          SG  MGF+R +  +   ++I E I  P  
Sbjct: 379 NLEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWICKLDHIREAIPFPRL 426


>gi|116629669|ref|YP_814841.1| asparaginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282852213|ref|ZP_06261565.1| asparagine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311110688|ref|ZP_07712085.1| asparagine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273393|sp|Q043G9|SYN_LACGA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116095251|gb|ABJ60403.1| asparaginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282556632|gb|EFB62242.1| asparagine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311065842|gb|EFQ46182.1| asparagine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 432

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 104/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           + ++  W R    R    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDNRHLWLRSK--RPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVEYFNNDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +                      +   E   R    D
Sbjct: 226 PEMAWMHQDESLDIQERYLAYMVKQV--------------------LENNEYELRILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFTRLPYDDAIKMLQEAGRDIKWGDDFGAPDEGYISEQ--FDRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR---HRFEKEMQEKKKI 298
           P            D                     E+    E+       +K+++E   +
Sbjct: 324 PTTIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEILKKQIEE-AGL 378

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y     +L          SG  MGF+R +  +   ++I E I  P  
Sbjct: 379 NLEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWICKLDHIREAIPFPRL 426


>gi|268319458|ref|YP_003293114.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
 gi|262397833|emb|CAX66847.1| asparaginyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
          Length = 432

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 104/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           + ++  W R    R    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDNRHLWLRSK--RPFAIMQIRNTMFKATIDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVEYFNNDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +                      +   E   +    D
Sbjct: 226 PEMAWMHQDESLDIQERYLAYMVKQV--------------------LENNEYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFTRLSYDDAIKMLQEAGRDIKWGDDFGAPDEGYISEQ--FDRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR---HRFEKEMQEKKKI 298
           P            D                     E+    E+       +++++E   +
Sbjct: 324 PTTIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEILKQQIEE-AGL 378

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y     +L          SG  MGF+R +  +   ++I E I  P  
Sbjct: 379 NLEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWICKLDHIREAIPFPRL 426


>gi|304312853|ref|YP_003812451.1| Asparaginyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301798586|emb|CBL46816.1| Asparaginyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 473

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 99/355 (27%), Gaps = 40/355 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  YF  + F  +++  +  S       +   ST   
Sbjct: 133 AHLRPRTNTFGAMARMRNSLSQAIHRYFDAHGFFWVNTPIITASDCEGAGEMFRVSTLDF 192

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         QD   K  +L  S + + +    A   +I+ F   +R        H
Sbjct: 193 LKLPRNAAGQVDFSQDFFGKEAFLTVSGQLNGEAFCTA-LSRIYTFGPTFRAENSNTSRH 251

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++     +     + + ++ +   F+E         
Sbjct: 252 LAEFWMVEPEMAFAD----LATIADVAEAFLQSVVSDLLNARDADIAFFTE-------HY 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             +              +          Q++G        W           +       
Sbjct: 301 DKQLRGRLENVIHQPFARMSYTEAVSILQKSGKEFQFPVQWGLDLQSEHERFLAEEYAKR 360

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP    A       D +     ++      L     E++   ++  R     +
Sbjct: 361 PV-IVMDYPEAIKAFYMRRNDDGKTCAAMDI------LAPGIGEIIGGSQREERLALLDE 413

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   +           L         +G  +GF+RL+   TG  NI + I  P  
Sbjct: 414 KMAPLGLAENLGWYRDLR-RYGTIPHAGFGLGFERLLTYATGMENIRDAIPFPRV 467


>gi|297744376|emb|CBI37350.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 102/365 (27%), Gaps = 48/365 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE--------- 56
            H R R          RN +  +  ++F EN F+ I S  +  S      E         
Sbjct: 232 AHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWISSPIITASDCEGAGEQFCVTTLIP 291

Query: 57  --THIRAFSTELII----------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
                   + + I           QD   KP +L  S + + +    A    ++ F   +
Sbjct: 292 SSREATDSTVDAIPKAKDGLIDWSQDFFGKPAFLTVSGQLNAETYATA-LSDVYTFGPTF 350

Query: 105 RNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R        H  EF M+E   A       M      ++       +              
Sbjct: 351 RAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYVVTYILENCKEDMEFFNTWIE 410

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
           +     +++   +           N  Q           +A  +      W         
Sbjct: 411 KGIINRLSDVAEK-----------NFVQLTYTDAVELLLRANKKFEFPVKWGCDLQSEHE 459

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             I       C  I+  YP    A       D +     ++    +       +  + +E
Sbjct: 460 RYITEVAFGGCPVIIRDYPKDIKAFYMRRNDDGKTVAAMDMLVPRVGELIGGSQREERLE 519

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                  +++  K   +  + +D             +G  +GF+RLV   TG +NI + I
Sbjct: 520 YLEERLDDLKLSK--DSYWWYLDLR----RYGSVPHAGFGLGFERLVQFATGIDNIRDAI 573

Query: 344 WTPFS 348
             P +
Sbjct: 574 PFPRT 578


>gi|291515937|emb|CBK65147.1| asparaginyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 462

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 60/361 (16%), Positives = 113/361 (31%), Gaps = 51/361 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            + R R       L  R+ +  ++ EYF ++ F    +  +  S       +  F    +
Sbjct: 121 AYLRPRTNTFGAVLRIRHAMAYAIHEYFNKHGFYYFHTPIITASDCEGAGAM--FQVTTL 178

Query: 68  IQDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             +++           +  +     L  S +   +    +   +I+ F   +R       
Sbjct: 179 DMNNLPRTGEGAVDYAQDFFGKACNLTVSGQLEGELGALS-LGRIYTFGPTFRAENSNTP 237

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E  M+   + ++     A          +    ++     + 
Sbjct: 238 RHASEFWMIEPEAAFFELEDNMELAEDFLKYLIRYA----LDNCMEDLEFMNKMWDKGLL 293

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNL 230
           E        D         + D        + +G +      W  D+ S      +E + 
Sbjct: 294 ERLHFVLEHDF-------KRLDYTEGIEILKASGRKFEFPCDWGCDLQSEHERYLVEEH- 345

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFE 289
                 IL  YP    A       D +  +  ++    I E+    +   D  +   R  
Sbjct: 346 -FKRPVILINYPKDIKAFYMKQNDDGKTVRAMDVLFPGIGEIIGGSEREADYGKLHARVA 404

Query: 290 KE-MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  M EK+            +L          SG  +GFDRL++ VTG  NI +V   P 
Sbjct: 405 ELGMNEKEL---------WWYLDTRRWGSAPHSGFGLGFDRLLLFVTGMTNIRDVQPFPR 455

Query: 348 S 348
           +
Sbjct: 456 T 456


>gi|324508809|gb|ADY43716.1| Aspartyl-tRNA synthetase [Ascaris suum]
          Length = 617

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 60/432 (13%), Positives = 130/432 (30%), Gaps = 106/432 (24%)

Query: 17  RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRK 74
           R +  L  R+ +   +R++ +E   F+E+++ +L + +PG  +    F       + + K
Sbjct: 160 RMQQALRLRSEVAHLMRKFLIEIANFVEVETPTLFRRTPGGASE---FIVPAPKPN-LGK 215

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
              L  SP+   + L+  G ++ +  A  +R+       QPEFT ++   +  +   +M+
Sbjct: 216 FYSLPQSPQQFKQLLMCGGLDRYYQIARCYRDEGSKLDRQPEFTQVDVELSFTTQNDVMQ 275

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY---ITVAEAFARYANIDLGTTLDNPDQ 191
              ++I  +     + +          F+E      I   +    +  +D    L   + 
Sbjct: 276 LIEDLIIQSWPKELKNMMPSAPFKRLSFAEAYRLYGIDKPDLRIPWTIVDCTERLMFLNS 335

Query: 192 PDRH----------------------------LLYLQAQQAGIRVAHDDTWSDIF---SR 220
            +                               + ++ Q+ GI       W         
Sbjct: 336 SNVEKFVARLFIGKGLAKRITRANRAEWKRLIEMNIKGQKFGIFTTSQKAWFKQISNAQL 395

Query: 221 ILIEKIEPNLGINCCT--------------------------------ILDRYPAPESA- 247
           +    IE    +                                     +  +P      
Sbjct: 396 MEEYHIEEEDAVVVSWGDDKGVQWTLGQLRHLIAEKAGLRATPRFDFVWITDFPLFIRND 455

Query: 248 ----LANIYPADPRFTKRFELYACNIELCN-----------------ACDELLDPIEQRH 286
                +  +P      +   L     ++ N                     + +   QR+
Sbjct: 456 DGQLESAHHPFTAPIPEHERLIFEPDQIENITAQHYDLVLNGVELGGGSIRIHNANVQRY 515

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN----INE 341
             E+ +        E+       L  L+   P   G A+G DR + L+ G  +    I +
Sbjct: 516 VIERIL-------GESAENLNHLLEALSFGAPPHGGFALGLDRYIALLLGKGDSSVGIRD 568

Query: 342 VIWTPFSQSNQE 353
           VI  P S+  ++
Sbjct: 569 VIAFPKSKEGRD 580


>gi|313123830|ref|YP_004034089.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312280393|gb|ADQ61112.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 432

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 104/350 (29%), Gaps = 46/350 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN I  +  ++F    F++ D+  L   +P         
Sbjct: 116 LDHRHLWLRSR--RPFAIMQIRNRIFKATVDFFENEGFVKFDAPILMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+     YL  S +   +    A   KIF F   +R        H  EF M+E
Sbjct: 167 TTELFHIDYFDHDAYLSQSGQLYGEVGAEA-FGKIFTFGPTFRAEASKTRRHLTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +        +                      E        D
Sbjct: 226 PEMAWMHQDESLDLQERFLSYVVGQVLEHC--------------------EYELSILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           L       +     L Y  A +       D  W D F       +      +    +  Y
Sbjct: 266 LDKLRPAAEGNYTRLSYDDAVKMLQEAGKDFKWGDDFGAPDEAFLSEQ--FDRPFFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH---RFEKEMQEK-KK 297
           P            +   T          E      E++   E+       + +++E    
Sbjct: 324 PVAIKPFYMKKNPENPLTYLCADV----EAPEGYGEIMGGSEREADYDTLKAQIEEAGLN 379

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + + ++ +D   L         SG  MGF+R++  +   +++ E +  P 
Sbjct: 380 LDDYSWYLD---LRK-YGSVPHSGFGMGFERVIAWICKLDHVREAVPFPR 425


>gi|226226853|ref|YP_002760959.1| asparaginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090044|dbj|BAH38489.1| asparaginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 433

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 111/350 (31%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++ +W R    R+   +  R+ ++ ++ ++F    F+  D+  L  + G    +  F 
Sbjct: 118 LDNRTFWLRS--PRQVAIMRVRHELEQAVHDFFYARDFVRCDTPILTAAIGERAGL--FG 173

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TE           YL  + +    + LAA   +I+ F   +R  +     H  EF M+E 
Sbjct: 174 TEYFD----EGTAYLAQTGQLY-GEALAAAMGRIYTFGPTFRAEKSKTRRHLTEFWMIEP 228

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    +  M      +R   E   ++      V     S+ + ++             
Sbjct: 229 EMAWYDQDDNMDLQEEFVRYLVERVLERRQEELKVLERDTSKLDCVS------------- 275

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                   QP   L Y  A         D  W D         I           +  YP
Sbjct: 276 --------QPFLRLDYTDAVAFAQSKGSDIKWGDDLGAPDEALIVDEH--QRPVFVVNYP 325

Query: 243 AP-ESALANIYPADPRFTKRFELY-ACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
              ++      PADPR  +  +L       E+        D  +   R        + + 
Sbjct: 326 KEAKAFYMKENPADPRTVRCADLLAPEGRGEIIGGSQREDDYEKILARLTH-----EGLP 380

Query: 300 NETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  +G +R +  + G  +I E I  P  
Sbjct: 381 VEAYG---WYLDLRRYGTFTHSGFGLGLERTIAWICGIEHIRECIPFPRM 427


>gi|195426485|ref|XP_002061363.1| GK20764 [Drosophila willistoni]
 gi|194157448|gb|EDW72349.1| GK20764 [Drosophila willistoni]
          Length = 533

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 109/333 (32%), Gaps = 34/333 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +        +    R+   EN F EI +  +Q       +           ++ ++  YL
Sbjct: 226 QAIFRLEAGVCRLFRDILTENGFTEIHTPKIQLPDEGGEY-------FFTVNYFKETAYL 278

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S     +  +AA  EK+F     +R  +     H  EF  L+     + +   +    
Sbjct: 279 AVSQYIHRQMAIAADFEKVFTVGAVFRAEDSHTHRHLIEFVGLDLEMTFKYHYHEVLHT- 337

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
                          S            +Y    EA  +   ++    L+ P        
Sbjct: 338 --------------ISNTLTAIFKGLRDQYSREIEAVGQQYKVEPFKFLEKPLILQFTEG 383

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADP 256
               ++AGI    D+  S    ++L   ++     +   ILD++P           P +P
Sbjct: 384 IAMLREAGIETGDDEDLSLPNEKLLGRLVKAKYDTD-FYILDKFPLSARPFYTMPDPDNP 442

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
           +++  F+++    E+ +    + DP        + + E+ K           ++      
Sbjct: 443 KYSNSFDMFMRGEEISSGAQRIHDP--------EYLIERAKHDAVELTKLAAYIDAFRYG 494

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +G ++G +R+VM   G NNI +    P  
Sbjct: 495 CSPHAGCSIGMERVVMFYLGLNNIRKTSMFPHD 527


>gi|157363790|ref|YP_001470557.1| asparaginyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|157314394|gb|ABV33493.1| asparaginyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 431

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 52/347 (14%), Positives = 103/347 (29%), Gaps = 44/347 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+   L  R+ + +++R+++ +  F+ ID+         E+    F 
Sbjct: 115 MSYRHLWLRSR--RQFHILKVRDAMLTAIRQFYRQRNFVLIDTPIFTG-AIGESAGNLFE 171

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +          +YL  + +    +       K++     +R  +     H  EF M E 
Sbjct: 172 LDYFDYG----KVYLTQTGQLYL-EAACMAFGKVYNLGPTFRAEKSKTRRHLIEFWMHEA 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A+  +E  ++    ++    +                 S+ E +              
Sbjct: 227 EVAYYEHEDNLRLQEELVSYIVKYVLDNALEHLIALGRDVSKLEKVC------------- 273

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                    P   + Y +A +   +   D  W D F       I  N        +  YP
Sbjct: 274 --------VPFERITYDEAIKLLQKNGSDIRWGDDFGGDEETIIASN--FEKPVFVTHYP 323

Query: 243 -APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
              ++      P  P      +L            E++       R         ++   
Sbjct: 324 RKAKAFYMQPDPHKPEVVLCGDL-----LAPEGYGEIIGGS---QRIHDYNLLLDRLNEF 375

Query: 302 TYPID--EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             P D  + +L          SG  +G +R V  + G  +I E I  
Sbjct: 376 NLPEDKYQWYLDLRKWGSVPHSGFGLGIERTVAWICGLEHIRESIPF 422


>gi|218903321|ref|YP_002451155.1| aspartyl-tRNA synthetase [Bacillus cereus AH820]
 gi|218538197|gb|ACK90595.1| aspartyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 432

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + +           +  YP     +   
Sbjct: 278 TLLEAQEILKSKYCKESPVGDLDTEG-EKLLGKYVNETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F++    K+   ++       +L
Sbjct: 336 PNNENSSITDSFDLLYKGLEITSGAQRIHNYEMLLDSFKE----KRLHPDKFQ----SYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|164424687|ref|XP_958075.2| hypothetical protein NCU06866 [Neurospora crassa OR74A]
 gi|157070619|gb|EAA28839.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 489

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 120/384 (31%), Gaps = 51/384 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--- 52
           +  IP         H R R       L  R+   ++L  +F EN F +     L  S   
Sbjct: 113 LRTIP---------HLRPRTPINAALLRMRSEAVAALTRFFAENHFTQTHPPILTSSDCE 163

Query: 53  PGNETHIRAF---STELIIQDHIRKPL------YLQTSPEFSCKKLLAAGEEKIFCFAHA 103
              E    A     TEL   +  +  +      YL  S +    + LA     ++  +  
Sbjct: 164 GAGEVFTVAPASNVTELSSTEDNKSKMFFRNKKYLTVSTQLHL-EALAQSVGNVWTLSPV 222

Query: 104 WRNGEQGC-LHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
           +R  +     H  EF MLE         +++M    ++IR       +    ++ +N   
Sbjct: 223 FRAEKSDTARHLSEFYMLEAEMNFVNDLDEVMDLAEDMIRNMCITMYESPTVYEFLNREG 282

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
               + ++  E  AR+  +                L   A +      H   W++     
Sbjct: 283 RVGSDLVSPEEVKARWEGMMADEWPRITYTDAIEFLQEHADE----FEHKPVWTEGLHSE 338

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIY-PADPRFTKRFELYACNIELCNACDELLD 280
             + I  ++G      +  YP    A       + P  +       C   L     E+  
Sbjct: 339 HEKFIAEHVGDGKPVFVTDYPRDIKAFYMREGQSLPDISSPGPTVECFDLLVPDLCEIAG 398

Query: 281 PIEQRHRFEKEMQEKKKIYNETYP----ID------------EDFLACLT-EMPQSSGIA 323
              + HR E  ++  K+           +D            + ++           G  
Sbjct: 399 GSMREHRLEPLLEAMKRHNIVAGEFTSSMDGNAPAGAKTGPLDWYVDLRRWGCAPHGGYG 458

Query: 324 MGFDRLVMLVTGANNINEVIWTPF 347
           +GFDRL+  +TG   I +++  P 
Sbjct: 459 IGFDRLLCYLTGVQTIRDMVSFPR 482


>gi|329767021|ref|ZP_08258549.1| asparaginyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328837746|gb|EGF87371.1| asparaginyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 428

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 112/349 (32%), Gaps = 46/349 (13%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
           ++  W R    ++   L  RN I  S  ++F +  F++ D   L  S P         +T
Sbjct: 114 NRHIWIRSK--KQHAILTIRNQIIKSTYDFFEKEGFLKTDPPILTSSAPEG-------TT 164

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           EL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E  
Sbjct: 165 ELFNTKYFDEEAYLSQSGQLYL-EATAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEAE 223

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A  ++++ +      +        +K                     +   +    D+ 
Sbjct: 224 MAFCNHDESLALQEAFVNHLLTDVLEKC--------------------QEQLKVLGRDIE 263

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
              +   +  R       +        D  + D F       I      N    +  +P 
Sbjct: 264 ALENARGEFPRIKYKDAIKLLKENGFDDIEYGDDFGSPHETFIA--NSYNKPVFITHWPL 321

Query: 244 PESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                  I  P +P      +L A          E++   ++   ++K ++  KK     
Sbjct: 322 DIKPFYMIEDPNEPGVVLCADLIAP-----EGYGEIIGGSQRIDDYDKLLENIKKHDL-- 374

Query: 303 YPIDE--DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +D    +L        + +G  +G +R V  +TG  ++ E +  P  
Sbjct: 375 -NLDTYGWYLDLRKYGSVEHAGFGLGLERTVAWITGNGHVRETVPFPRL 422


>gi|313123660|ref|YP_004033919.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312280223|gb|ADQ60942.1| asparaginyl-tRNA synthetase-like protein 2 [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 432

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 104/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN I  +  ++F    F++ D+  L   +P         
Sbjct: 116 LDHRHLWLRSR--RPFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+     YL  S +   +    A   KIF F   +R        H  EF M+E
Sbjct: 167 TTELFHIDYFDHDAYLSQSGQLYGEVGAEA-FGKIFTFGPTFRAEASKTRRHLTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +        +                      E        D
Sbjct: 226 PEMAWMHQDESLDLQERFLSYVVGQVLEHC--------------------EYELSILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           L       +     L Y  A +       D  W D F       +      +    +  Y
Sbjct: 266 LDKLRPAAEGNYTRLSYDDAVKMLQEAGKDFKWGDDFGAPDEAFLSEQ--FDRPFFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH---RFEKEMQEK-KK 297
           P            +   T          E      E++   E+       + +++E    
Sbjct: 324 PVAIKPFYMKKNPENPLTYLCADV----EAPEGYGEIMGGSEREADYDTLKAQIEEAGLN 379

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++ +D   L         SG  MGF+R++  +   +++ E +  P  
Sbjct: 380 LDDYSWYLD---LRK-YGSVPHSGFGMGFERVIAWICKLDHVREAVPFPRM 426


>gi|297182913|gb|ADI19063.1| truncated, possibly inactive, lysyl-tRNA synthetase (class II)
           [uncultured delta proteobacterium HF0070_07E19]
          Length = 259

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 9/261 (3%)

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            K++L  G EKI+     +R  E G  H PEFTMLEWYR  E++++L +D   + R    
Sbjct: 1   MKRMLVGGFEKIYQINACYRGKEVGYWHNPEFTMLEWYRVGENWQRLCQDLQELTRYLPR 60

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                 +     +     + +  TV +    +   ++       D  ++           
Sbjct: 61  S-----WIDSKQHKMLEGDWKLTTVNDLLQEFWQFEIRPNDQAGDLLEKLYKNGHKNWIN 115

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
               +++++  IF RI   ++E  LG     ++  +P   ++LA   P    F +R E Y
Sbjct: 116 QHRINEESFLLIFGRIWD-ELEKTLGWERPCLVTDWPPQLASLAQHNPN--GFAERVECY 172

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAM 324
              +E+ N   EL DP EQR RFE E+  + ++      +D  FL  L   MP S G+A+
Sbjct: 173 VQGMEIANGFGELTDPNEQRKRFEIELIHRNQVGKLDVALDHQFLDSLKEGMPPSCGMAL 232

Query: 325 GFDRLVMLVTGANNINEVIWT 345
           G +RL++ +    +I  V+  
Sbjct: 233 GIERLLIWLLDVPSIANVMAF 253


>gi|229121752|ref|ZP_04250973.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228661668|gb|EEL17287.1| Aspartyl/asparaginyl-tRNA synthetase [Bacillus cereus 95/8201]
          Length = 432

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 109/339 (32%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQEILKSKYCKESPVGDLDTEG-EKLLGKYVKETYKSE-FVFIIHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K+K  +      + +L
Sbjct: 336 PNNENSAITDSFDLLYKGLEITSGAQRIHNYEMLLDSF------KEKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|104774004|ref|YP_618984.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|104774115|ref|YP_619095.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116514186|ref|YP_813092.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|1711643|sp|P54262|SYN_LACDA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|1321875|emb|CAA61603.1| asparagine--tRNA ligase [Lactobacillus delbrueckii]
 gi|103423085|emb|CAI97806.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103423196|emb|CAI97997.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116093501|gb|ABJ58654.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 432

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 104/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN I  +  ++F    F++ D+  L   +P         
Sbjct: 116 LDHRHLWLRSR--RPFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+     YL  S +   +    A   KIF F   +R        H  EF M+E
Sbjct: 167 TTELFHIDYFNHDAYLSQSGQLYGEVGAEA-FGKIFTFGPTFRAEASKTRRHLTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +        +                      E        D
Sbjct: 226 PEMAWMHQDESLDLQERFLSYVVGQVLEHC--------------------EYELSILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +       +     L Y  A +       D  W D F       +      +    +  Y
Sbjct: 266 VDKLRPAAEGNYTRLSYDDAVKMLQEAGKDFKWGDDFGAPDEAFLSEQ--FDRPFFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH---RFEKEMQEK-KK 297
           P            +   T          E      E++   E+       + +++E    
Sbjct: 324 PVAIKPFYMKKNPENPLTYLCADV----EAPEGYGEIMGGSEREADYDTLKAQIEEAGLN 379

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++ +D   L         SG  MGF+R++  +   +++ E +  P  
Sbjct: 380 LDDYSWYLD---LRK-YGSVPHSGFGMGFERVIAWICKLDHVREAVPFPRM 426


>gi|325684154|gb|EGD26347.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 327

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 103/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN I  +  ++F    F++ D+  L   +P         
Sbjct: 16  LDHRHLWLRSR--RPFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEG------- 66

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+     YL  S +   +    A   KIF F   +R        H  EF M+E
Sbjct: 67  TTELFHIDYFDHDAYLSQSGQLYGEVGAEA-FGKIFTFGPTFRAEASKTRRHLTEFWMME 125

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +        +                      E        D
Sbjct: 126 PEMAWMHQDESLDLQERFLSYVVGQVLEHC--------------------EYELSILGRD 165

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           L       +     L Y  A +       D  W D F       +      +    +  Y
Sbjct: 166 LDKLRPAAEGNYTRLSYDDAVKMLQEAGKDFKWGDDFGAPDEAFLSEQ--FDRPFFIVNY 223

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH---RFEKEMQEK-KK 297
           P            +   T          E      E++   E+       + +++E    
Sbjct: 224 PVAIKPFYMKKNPENPLTYLCADV----EAPEGYGEIMGGSEREADYDTLKAQIEEAGLN 279

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++ +D             SG  MGF+R++  +   ++I E +  P  
Sbjct: 280 LDDYSWYLDLR----KYGSVPHSGFGMGFERVIAWICKLDHIREAVPFPRM 326


>gi|300812856|ref|ZP_07093251.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496192|gb|EFK31319.1| asparagine--tRNA ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 432

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 104/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN I  +  ++F    F++ D+  L   +P         
Sbjct: 116 LDHRHLWLRSR--RPFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+     YL  S +   +    A   KIF F   +R        H  EF M+E
Sbjct: 167 TTELFHIDYFDHDAYLSQSGQLYGEVGAEA-FGKIFTFGPTFRAEASKTRRHLTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +        +                      E        D
Sbjct: 226 PEMAWMHQDESLDLQERFLSYVVGQVLEHC--------------------EYELSILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           L       +     L Y  A +       D  W D F       +      +    +  Y
Sbjct: 266 LDKLRPAAEGNYTRLSYDYAVKMLQEAGKDFKWGDDFGAPDEAFLSER--FDRPFFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH---RFEKEMQEK-KK 297
           P            +   T          E      E++   E+       + +++E    
Sbjct: 324 PVAIKPFYMKKNPENPLTYLCADV----EAPEGYGEIMGGSEREADYDTLKAQIEEAGLN 379

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++ +D   L         SG  MGF+R++  +   +++ E +  P  
Sbjct: 380 LDDYSWYLD---LRK-YGSVPHSGFGMGFERVIAWICKLDHVREAVPFPRM 426


>gi|116514020|ref|YP_812926.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|116093335|gb|ABJ58488.1| asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|325125709|gb|ADY85039.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 432

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 104/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN I  +  ++F    F++ D+  L   +P         
Sbjct: 116 LDHRHLWLRSR--RPFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+     YL  S +   +    A   KIF F   +R        H  EF M+E
Sbjct: 167 TTELFHIDYFNHDAYLSQSGQLYGEVGAEA-FGKIFTFGPTFRAEASKTRRHLTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +        +                      E        D
Sbjct: 226 PEMAWMHQDESLDLQERFLSYVVGQVLEHC--------------------EYELSILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +       +     L Y  A +       D  W D F       +      +    +  Y
Sbjct: 266 VDKLRPAAEGNYTRLSYDDAVKMLQEAGKDFKWGDDFGAPDEAFLSEQ--FDRPFFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH---RFEKEMQEK-KK 297
           P            +   T          E      E++   E+       + +++E    
Sbjct: 324 PVAIKPFYMKKNPENPLTYLCADV----EAPEGYGEIMGGSEREADYDTLKAQIEEAGLN 379

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++ +D   L         SG  MGF+R++  +   +++ E +  P  
Sbjct: 380 LDDYSWYLD---LRK-YGSVPHSGFGMGFERVIAWICKLDHVREAVPFPRM 426


>gi|330718585|ref|ZP_08313185.1| asparaginyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 435

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 62/354 (17%), Positives = 105/354 (29%), Gaps = 46/354 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  +    H +    L  RN +  +  E+F +  F ++DS  L   +P         
Sbjct: 119 MDHRHLYL--RHLKPFATLKIRNELIRATYEFFNKEGFTKLDSPILTGSAPEG------- 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +  YL  + +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 170 TTELFETDYFGESAYLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIE 228

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  + E+ ++     I    E                      +   E        D
Sbjct: 229 PEMAFTTQEESLEVQERYISYLIESV--------------------LKNNEQELDILGRD 268

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                     P   L Y  A Q       D  W   F       +  +   +    +  +
Sbjct: 269 KEVLRSYTQLPYPRLSYDDAIQLLQDNGFDVEWGVDFGSPEETFLAEH--FSKPVFIVNF 326

Query: 242 PAPE-SALANIYPADPRFTKRFELY-ACNIELCNACDELLDPIEQRH-RFEKEMQEKKKI 298
           P    +     +P         +L             E     E    R E++      +
Sbjct: 327 PKEIKAFYMKRHPTRDDVVISADLLAPEGYGEIIGGSERDTDYEYLKTRIEEQ-----GL 381

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
               Y     +L          SG  +G +R++  VTG  +I E I  P   S 
Sbjct: 382 DLAEYQ---WYLDLRQYGTVPHSGFGLGLERMITFVTGEEHIREAIPFPRMISR 432


>gi|323449487|gb|EGB05375.1| hypothetical protein AURANDRAFT_30982 [Aureococcus anophagefferens]
          Length = 551

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 105/350 (30%), Gaps = 37/350 (10%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
              W       +   +  +  +    R    +  F EI S  L     +E+    F+TE 
Sbjct: 225 DYRWLDLRTPAQGSVMRVQAAVCKLFRRTMDDAGFTEIHSPKLVG-GESESGAGVFTTE- 282

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
               +      L  SP+   K+L       +F     +R        H  EFT L++   
Sbjct: 283 ----YFGSTACLAQSPQLY-KQLARRDLGAVFEVGPVFRAENSNTRRHLCEFTGLDFEMP 337

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             S+        +    A     ++ FS +          E +                 
Sbjct: 338 ITSHYLEAVRVGHRTFKAIFEGLERDFSKELAAVRDQYPSEPV---------------VV 382

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
            D P            + +G+ V  D         + +  +          ++DRYPA  
Sbjct: 383 SDEPVVIHFADAIAMLRDSGVDVEDDYGDLSGADELALGALVKEQHGVDFFVVDRYPAAI 442

Query: 246 SALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                   P+D R +  ++ +    E+C+    + DP         E   K K  +    
Sbjct: 443 RPFYTMRDPSDDRLSNSYDFFLRGQEICSGAQRVHDPAML------EAALKAKGIDPGAE 496

Query: 305 ID-----EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            D     + ++       P  +G   G +R+V L  G +NI +    P  
Sbjct: 497 -DLSPSLKSYMTAFEHGAPPHAGCGFGLERVVFLYLGLDNIRKASLFPRD 545


>gi|254389997|ref|ZP_05005219.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294813913|ref|ZP_06772556.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326442327|ref|ZP_08217061.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197703706|gb|EDY49518.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326512|gb|EFG08155.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 436

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 105/353 (29%), Gaps = 46/353 (13%)

Query: 3   QIPSQPWWNRDFHY-------RRRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQY 51
            +P       +          RRRP        +  ++  +REY       E+ +  L  
Sbjct: 103 PLPIDEHTGLEQRLDWRFLDVRRRPATQLMFAVQTTLEQGMREYAYAQGATEMHTPKLMG 162

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
           +  +E+    F        +  +  YL  SP+F  +  ++AG +K+F     +R      
Sbjct: 163 TA-SESGAEVFK-----LGYFDRSAYLAQSPQFYKQMAISAGIDKVFEIGPVFRAEPSFT 216

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EFT ++   A     + +      +   A                          
Sbjct: 217 SRHATEFTGVDVELAWIDGVEDVMAFEERMLAHAIAKVADA------------------H 258

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            EA A    +++        +          ++ G          D      I       
Sbjct: 259 GEAIAERFGVEVTVPTTPFPRITMAEAQKILREGGWDPEGIKEDLDPEGERSISAHIKEA 318

Query: 231 GINCCTILDRYPAPESALANIYP-ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +    +  YP       ++ P  DP  T  F+L    +E+                  
Sbjct: 319 TGHEFVFITHYPVGIRPFYHMRPADDPGVTLSFDLLWKGLEVTTGAQREHRYDVLLK--- 375

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
            +  EK  +  E      D+L       P   G+ MG  R++M++ G ++I E
Sbjct: 376 -QAAEK-GMSPEPL---RDYLNAFRYGCPPHGGLGMGLGRVLMVMLGLDSIRE 423


>gi|161507621|ref|YP_001577575.1| asparaginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048289|sp|A8YVJ7|SYN_LACH4 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|160348610|gb|ABX27284.1| Asparaginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 432

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 60/350 (17%), Positives = 101/350 (28%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDHRHLWLRSK--KPFAIMQIRNTMFKATVDFFEKEDFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   D+     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVDYFDHDAYLSQSGQLY-GEAGAMAFGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +    K                     E   +    D
Sbjct: 226 PEMAWMHQDESLDLQERYLAYMVKQVLDKN--------------------EYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFVRLPYDDAVKMLQDAGRDFKWGDDFGAPDEGYISEQY--DRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P            D                     E+    E+   +E  ++      + 
Sbjct: 324 PTSIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEVLEQQIIDAGLN 379

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  MGF+R +  V   ++I E I  P  
Sbjct: 380 LEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPRL 426


>gi|297802914|ref|XP_002869341.1| hypothetical protein ARALYDRAFT_491623 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315177|gb|EFH45600.1| hypothetical protein ARALYDRAFT_491623 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 557

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 102/339 (30%), Gaps = 45/339 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  +++S RE  +   F+ I +  L    S G     R         ++  +P 
Sbjct: 249 QAIFRLQCQVENSFREKLIFKDFVGIHTPKLMAGSSEGGSAVFR--------LEYKGQPA 300

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  +     ++F     +R  +     H  EF  L+       +   + D
Sbjct: 301 CLAQSPQLHKQMAICGDLRRVFEVGPVFRAEDSFTHRHLCEFVGLDVEMEIRKHYSEIMD 360

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +      +  +    +          E +       R                   
Sbjct: 361 LVDELFVFIFTSLNEKCKKELEAVRKQYPFEPLKFLPKTLRLT---------------FE 405

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPA 254
                 ++AG+ V      +    R L + +          IL RYP        +    
Sbjct: 406 EGVQMLKEAGVEVDPLGDLNTESERKLGQLVLEKYNTE-FYILHRYPKAVRPFYTMTCAD 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFL 310
           +P ++  F+++    E+ +    +  P     R               + ID      ++
Sbjct: 465 NPLYSNSFDVFIRGEEIISGAQRVHIPEILEQR---------AG---EFGIDVKTISTYI 512

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+VML  G NNI +    P  
Sbjct: 513 DSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLFPRD 551


>gi|188995082|ref|YP_001929334.1| asparaginyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|259511570|sp|B2RK42|SYN_PORG3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|188594762|dbj|BAG33737.1| asparaginyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 469

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 108/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  +F    +    +  +  S       +  F    +
Sbjct: 125 AHLRPRTNTFGVIYRIRHHMAIAIHTFFHNKGYYYFHAPLITASDCEGAGQM--FQVTTL 182

Query: 68  IQDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             D +           K  +     L  S +   +    A    I+ F   +R       
Sbjct: 183 NPDSLPRTEEGQVDYRKDFFGRHTSLTVSGQLEGEMAAMA-LGGIYTFGPTFRAENSNTP 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E  M      I+   + A        +     F +       
Sbjct: 242 RHLAEFWMIEPEVAFLEIEDNMDLAEEFIKYCVQWALDNCMDDISFLSEHFDK------- 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E   R   +     +         +L  +A + G++      W    +      +     
Sbjct: 295 ELIDRLKFVLEKPFVRLAYTEGIRIL-EEAVKNGVKFEFPIYWGADLASEHERYLVEVHF 353

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                I+  YP    +       D +  +  ++    I       E++   E+   ++K 
Sbjct: 354 KTPV-IMTDYPKEIKSFYMKLNDDGKTVRGMDVLFPKI------GEIIGGSEREADYDKL 406

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +    ++      I   +L          SG  +GF+RL++ VTG +NI +VI  P +
Sbjct: 407 VARANEMGVPEKDI-WWYLDSRRYGTAPHSGFGLGFERLLLFVTGMSNIRDVIPFPRT 463


>gi|34540852|ref|NP_905331.1| asparaginyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|59798576|sp|Q7MVE5|SYN_PORGI RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|34397166|gb|AAQ66230.1| asparaginyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 469

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 108/358 (30%), Gaps = 42/358 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  ++  +F    +    +  +  S       +  F    +
Sbjct: 125 AHLRPRTNTFGAIYRIRHHMAIAIHTFFHNKGYYYFHAPLITASDCEGAGQM--FQVTTL 182

Query: 68  IQDHIR----------KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
             D +           K  +     L  S +   +    A    I+ F   +R       
Sbjct: 183 NPDSLPRTEEGQVDYRKDFFGRHTSLTVSGQLEGEMAAMA-LGGIYTFGPTFRAENSNTP 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E  M      I+   + A        +     F +       
Sbjct: 242 RHLAEFWMIEPEVAFLEIEDNMDLAEEFIKYCVQWALDNCMDDISFLSEHFDK------- 294

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E   R   +     +         +L  +A + G++      W    +      +     
Sbjct: 295 ELIDRLKFVLEKPFVRLAYTEGIRIL-EEAVKNGVKFEFPIYWGADLASEHERYLVEVHF 353

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                I+  YP    +       D +  +  ++    I       E++   E+   ++K 
Sbjct: 354 KTPV-IMTDYPKEIKSFYMKLNDDGKTVRGMDVLFPKI------GEIIGGSEREADYDKL 406

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +    ++      I   +L          SG  +GF+RL++ VTG +NI +VI  P +
Sbjct: 407 VARANEMGVPEKDI-WWYLDSRRYGTAPHSGFGLGFERLLLFVTGMSNIRDVIPFPRT 463


>gi|190348974|gb|EDK41535.2| hypothetical protein PGUG_05633 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 481

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 109/360 (30%), Gaps = 36/360 (10%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--- 52
           +  +P+          R R       L  R+ ++ S + +F +N  I++ +  +  S   
Sbjct: 140 LRTLPT---------LRHRTSSLASVLRLRSFLEGSFQRFFEQNDVIKVSAPLITSSDCE 190

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR-NGEQGC 111
              E  I              KP YL  S +    ++L+    +++     +R       
Sbjct: 191 GAGEQFIVEAKDSKPENPFFGKPAYLTVSTQLHL-EVLSQSLNRVWALTPCFRAEESHTN 249

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF MLE   ++      + D    +         +       N    S        
Sbjct: 250 RHLSEFWMLEAELSYIESVHQICDFTENMIRYV----TQDVVQSIANDLAQSRYNKDERQ 305

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
              A +  I            +   +  + +  G       TW D       + +     
Sbjct: 306 AMEANWKTILQSEPWPRITYTEAIEIINKIKNKGRSKGR-LTWGDSIQTEHEKWLAETHF 364

Query: 232 INCCTILDRYPAPESALANIYPADPRFT-KRFELYACNI-ELCNACDELLDPIEQRHRFE 289
            +    +  YP  +         +   T   F+L    I EL        +      +  
Sbjct: 365 KSPV-FITDYPKAQKPFYMPESENQNSTVACFDLIIPGIGELVGGSVREHNY----EKLL 419

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +E++ +     +     E +L+          G  MG +RLV  ++G  +I +VI  P +
Sbjct: 420 QELKNRNMSIEDN----EWYLSIRENGTVPHGGFGMGMERLVAFLSGMASIKDVIAFPRT 475


>gi|41582294|gb|AAS07908.1| asparaginyl-tRNA synthetase [uncultured marine bacterium 463]
          Length = 465

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 104/356 (29%), Gaps = 41/356 (11%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R  + +++  YF +N F  I++  L  S       +   ST  
Sbjct: 125 QAHLRPRTNTFGAITRVRTTLANAIHNYFHDNDFNWINTPILTGSDCEGAGELFRVSTLD 184

Query: 67  IIQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                           D      +L  S +   +    A   K++ F   +R        
Sbjct: 185 FANLPLDGKGGVNFEEDFFAGESFLTVSGQLEVESYCLAMS-KVYTFGPTFRAENSNTSR 243

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A            ++++        +I   +  +   F +    TV +
Sbjct: 244 HLAEFWMVEPEIAFADLNDDADLAESLLKH----VFTRILEEREDDMAFFQQRIDKTVID 299

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                         +N ++ D        + +G +  +   W    +      +     +
Sbjct: 300 RLR-------AVIDNNFERMDYSEAITILKNSGKKFEYPVEWGVDMASEHERFLAEEH-V 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               ++  YP    A       D +             L     E++   ++  R +   
Sbjct: 352 GRPVVVMNYPKDIKAFYMRLNDDEKTVAAM------DVLAPGIGEIIGGSQREERLDVLD 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +   E      D           +G  +GF+RL+  VTG  N+ + I  P +
Sbjct: 406 ARMDEHLREELWWYRDLRR--YGTVPHAGFGLGFERLLNYVTGMENVRDAIPFPRT 459


>gi|1495654|emb|CAA61604.1| asparagine--tRNA ligase [Lactobacillus delbrueckii]
 gi|325125875|gb|ADY85205.1| Asparaginyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 432

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 104/351 (29%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAF 62
           +  +  W R    R    +  RN I  +  ++F    F++ D+  L   +P         
Sbjct: 116 LDHRHLWLRSR--RPFAIMQIRNRIFKATVDFFENEGFVKFDAPLLMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+     YL  S +   +    A   KIF F   +R        H  EF M+E
Sbjct: 167 TTELFHIDYFNHDAYLSQSGQLYGEVGAEA-FGKIFTFGPTFRAEASKTRRHLTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +        +                      E        D
Sbjct: 226 PEMAWMHQDESLDLQERFLSYVVGQVLEHC--------------------EYELSILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           L       +     L Y  A +       D  W D F       +      +    +  Y
Sbjct: 266 LDKLRPAAEGNYTRLSYDDAVKMLQEAGKDFKWGDDFGAPDEAFLSEQ--FDRPFFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH---RFEKEMQEK-KK 297
           P            +   T          E      E++   E+       + +++E    
Sbjct: 324 PVAIKPFYMKKNPENPLTYLCADV----EAPEGYGEIMGGSEREADYDTLKAQIEEAGLN 379

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++ +D   L         SG  MGF+R++  +   +++ E +  P  
Sbjct: 380 LDDYSWYLD---LRK-YGSVPHSGFGMGFERVIAWICKLDHVREAVPFPRM 426


>gi|208809240|ref|ZP_03251577.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208729041|gb|EDZ78642.1| asparagine tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
          Length = 464

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 106/358 (29%), Gaps = 47/358 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A  +  F  +  +R        H
Sbjct: 185 ENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSK--FIPSPTFRAENSNTSRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +   +      +++   +   ++    +  +   F+E         
Sbjct: 243 LAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAVSR 298

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R+   D           D        +  G +        D+ S       E +    
Sbjct: 299 LERFIEADFAQV-------DYTEAVTILENCGRKFETGLLGVDLSSEHERYLAEEH--FK 349

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              ++  YP    A       D +     ++ A  I E+               R  +  
Sbjct: 350 APVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMG 409

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 410 LNKE---------DYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 458


>gi|313680121|ref|YP_004057860.1| aspartate--tRNA(asn) ligase [Oceanithermus profundus DSM 14977]
 gi|313152836|gb|ADR36687.1| aspartate--tRNA(Asn) ligase [Oceanithermus profundus DSM 14977]
          Length = 424

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/342 (16%), Positives = 107/342 (31%), Gaps = 39/342 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
              + R  L  ++ +    R+Y     F EI +  L    G E     F       D+  
Sbjct: 119 RGEKARAPLKIQSALVRGFRKYLDSQGFTEIFTPKLVR-AGAEGGANLFEV-----DYFG 172

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           +  YL  SP+   K+++    E+++  A  WR  E     H  E+  L+        ++ 
Sbjct: 173 ESAYLAQSPQLY-KQIMVGVYERVYEVAPVWRAEEHATSRHLNEYLSLDVEMGFIDSDED 231

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +      +  A      +    +                               + P  P
Sbjct: 232 VMALEEELVRAMLEETAQTAGPELALLEVEMP------------------KLPREIPRVP 273

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                 +  ++ G+ +  D   +D   R L        G +    + +YP          
Sbjct: 274 YAEAKRIVKEELGLGMGAD--LNDEAERALGAYFAEKYGTD-FVFIVQYPESVRPFYTY- 329

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           P     T+ ++L    +E+ +    + DP         +  EKK +  + +    D++  
Sbjct: 330 PTGDGLTRGYDLLFRGLEITSGGQRIHDPDVIV-----QQLEKKGMDPQRF---RDYIEV 381

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               MP   G A+G +R    + G  N+      P  +   E
Sbjct: 382 FKYGMPPHGGFAIGAERFTQKLIGLPNVRYARAFPRDRHRLE 423


>gi|255934850|ref|XP_002558452.1| Pc12g16540 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|255942169|ref|XP_002561853.1| Pc18g00060 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583071|emb|CAP81281.1| Pc12g16540 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211586586|emb|CAP94230.1| Pc18g00060 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 556

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 107/322 (33%), Gaps = 32/322 (9%)

Query: 34  EYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
           EY +++    I +  L  +   E     F  +   ++      YL  SP+   +  +A  
Sbjct: 254 EYMIKSGSRWIFTPKLVGAA-TEGGSGVFEVKYFKRNA-----YLAQSPQLYKQMCIAGD 307

Query: 94  EEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
            E +F  A  +R  +     H  EF+ L++ +   ++   + +    +        ++ +
Sbjct: 308 MENVFEIAPVFRAEDSNTHRHLTEFSGLDFEKTFRNHYHEVLEFAENLLVFILTQLKERY 367

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
           + Q                      A            + +        ++AG+ V+  +
Sbjct: 368 ATQIATIQKSYP------------KAGDFKLPKDGKALRLNYMDGVALLKEAGVDVSEQE 415

Query: 213 TWSDIF----SRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYAC 267
           ++ + F     + L + I      +   +LD++P           P D RF+  ++ +  
Sbjct: 416 SFENDFTTAMEKQLGQIIRDKYDTD-FYVLDKFPMAVRPFYTKADPNDKRFSNSYDFFMR 474

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+ +    + D  E           + K         ED+L       P  +G  +G 
Sbjct: 475 GEEIMSGAQRIHDIKELEE------SMRAKGLEPNQEGFEDYLNAFRQGCPPHAGGGLGL 528

Query: 327 DRLVMLVTGANNINEVIWTPFS 348
           +R+VM   G  N+      P  
Sbjct: 529 NRIVMFFLGLPNVRLASLFPRD 550


>gi|241896120|ref|ZP_04783416.1| asparaginyl-tRNA synthetase [Weissella paramesenteroides ATCC
           33313]
 gi|241870634|gb|EER74385.1| asparaginyl-tRNA synthetase [Weissella paramesenteroides ATCC
           33313]
          Length = 431

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/351 (17%), Positives = 112/351 (31%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  +    H +    L  RN + ++  E+F +  FI+IDS  L   +P         
Sbjct: 115 MDHRHLYL--RHIQPFAVLRIRNTLIAATYEFFNKEGFIKIDSPLLTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++     YL  + +   +    A   ++F F   +R  +     H  EF M+E
Sbjct: 166 TTELFHTEYFEDDAYLSQTGQLYAEAGAMA-FGRVFTFGPTFRAEKSKTRRHLTEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  + E  +K     I    +                      +   E        D
Sbjct: 225 PEMAWMTQEDSLKIQERYIAYLIQSV--------------------LDRNEYELDLLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                     P   + Y  A +       D  W   F       +  +        +  +
Sbjct: 265 KELLKSYTQLPYPRVSYDDAIKLLQENDFDVKWGVDFGSPEETFLANHFA--KPVFITNF 322

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKKKIYN 300
           P    A       D        + + ++       E++   E+   F+  E + K++  +
Sbjct: 323 PKEIKAFYMKRHPDRDDV----VISADLLAPEGYGEIIGGSERDTDFDYLEKRIKEQGLD 378

Query: 301 ETYPIDE--DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               IDE   +L          SG  +G +R V  +TG  +I E I  P +
Sbjct: 379 ----IDEYSWYLDLRKYGSVPHSGFGLGLERAVTWITGEEHIREAIPFPRT 425


>gi|323466412|gb|ADX70099.1| asparaginyl-tRNA synthetase-like protein 2 (putative)
           [Lactobacillus helveticus H10]
          Length = 448

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/350 (17%), Positives = 101/350 (28%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 132 LDHRHLWLRSK--KPFAIMQIRNTMFKATVDFFEKEDFIKFDAPIFMHSAPEG------- 182

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   D+     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 183 TTQLFHVDYFDHDAYLSQSGQLY-GEAGAMAFGKIFTFGPTFRAEESKGRRHMTEFWMME 241

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +    K                     E   +    D
Sbjct: 242 PEMAWMHQDESLDLQERYLAYMVKQVLDKN--------------------EYELKILGRD 281

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 282 PEKLRPTTEGNFVRLPYDDAVKMLQDAGRDFKWGDDFGAPDEGYISEQY--DRPVFIVNY 339

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P            D                     E+    E+   +E  K+      + 
Sbjct: 340 PTSIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEVLKQQIIDAGLN 395

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  MGF+R +  V   ++I E I  P  
Sbjct: 396 LEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPRL 442


>gi|225467491|ref|XP_002266717.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 314

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/328 (15%), Positives = 96/328 (29%), Gaps = 24/328 (7%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHIRKPLYLQTS 81
             RN +  +  ++F EN F+ I S  +  S           +T     D   KP +L  S
Sbjct: 3   RVRNALAYATHKFFQENGFVWISSPIITASDCEGAGEQFCVTT----LDFFGKPAFLTVS 58

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNII 140
            + + +    A    ++ F   +R        H  EF M+E   A       M      +
Sbjct: 59  GQLNAETYATA-LSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYL 117

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +       +              +     +++   +           N  Q         
Sbjct: 118 QYVVTYILENCKEDMEFFNTWIEKGIINRLSDVAEK-----------NFVQLTYTDAVEL 166

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
             +A  +      W           I       C  I+  YP    A       D +   
Sbjct: 167 LLRANKKFEFPVKWGCDLQSEHERYITEVAFGGCPVIIRDYPKDIKAFYMRRNDDGKTVA 226

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
             ++    +       +  + +E       +++  K   +  + +D             +
Sbjct: 227 AMDMLVPRVGELIGGSQREERLEYLEERLDDLKLSK--DSYWWYLDLR----RYGSVPHA 280

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFS 348
           G  +GF+RLV   TG +NI + I  P +
Sbjct: 281 GFGLGFERLVQFATGIDNIRDAIPFPRT 308


>gi|312601373|gb|ADQ90628.1| Asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 449

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 66/352 (18%), Positives = 119/352 (33%), Gaps = 30/352 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           + Q+P   + +R   +R    +  R+ +   + ++F    FI   +  L  +   E    
Sbjct: 118 LRQMP--HFRHRSRLFRV--IMKLRSALFFEIHKFFRRQGFINFSAPILTSND-GEGAGE 172

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F  +   +D   K   L  + +   +       +K++ FA  +R        H  EF M
Sbjct: 173 VFIVDDENKDFFNKKTTLGVTGQLHAEAYALG-FKKVYTFAPTFRAERSNTRRHAAEFWM 231

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   A  +          II  A ++  + I S    N + F   E         R   
Sbjct: 232 IEPEVAFFT-------LEQIIELAVKLLQKVIKSVIIRNKDEFIFLEKAGDKNLRKRLLQ 284

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                      +    LL    ++       D  +           +   +      ++ 
Sbjct: 285 FCDSQVTQISYEKAIELLLEHQEKFE---EKDLFFGCDLKTEHERFLTEEIFHMPV-VII 340

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            YP    A       D +    F+L    I       EL+   ++  R+E   +   ++ 
Sbjct: 341 NYPRNLKAFYMHQNEDGQTVAAFDLLVPGI------GELIGGSQREVRYE---KLLTRMN 391

Query: 300 NETYPIDED--FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                I+E   +L       P SSG  +GF+RL+M +TG  NI +VI  P +
Sbjct: 392 ELNMNIEEFQWYLDLRKYGNPGSSGFGLGFERLLMYITGIENIRDVIPFPRT 443


>gi|209876658|ref|XP_002139771.1| asparaginyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209555377|gb|EEA05422.1| asparaginyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 518

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 114/399 (28%), Gaps = 79/399 (19%)

Query: 3   QIPSQPW---WNRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +     + R+  H R R          RN +  ++ +YF    F  I +  +  + 
Sbjct: 138 PLAKKHHSKEFLREIPHLRPRTQFFSSVTRIRNTLSIAIHDYFQYLGFYYIQTPIITSAD 197

Query: 53  --PGNE--------------------------THIRAFSTELII---------QDHIRKP 75
                E                          T I   ST+            +D    P
Sbjct: 198 CEGAGEMFQVTTLLPHSNIISDIPTKKTGNLSTKINPESTDNHDKLDNMIDYNRDFFEVP 257

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMK 134
            YL  S + + +    +  + ++ F   +R        H  EF M+E   A       M 
Sbjct: 258 TYLTVSGQLNVENFSCSMSD-VYTFGPTFRAENSHTGRHLAEFWMIEPEMAFADLLDDMN 316

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP-- 192
               +++   E   +                  +   +A      I+    + + +    
Sbjct: 317 LGEGLLKYCVEAVLKNNEV-------------DLQYLDANIEKGLINRLKQVVSEEFARI 363

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                    +    +      W         + I   + +    IL  YP    A     
Sbjct: 364 SYTEAIEMLKPYNNKFTVPVEWGMDLGSEHEKYITD-VLLKKPCILYNYPKDIKAFYMKQ 422

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID--EDF- 309
             D       ++    I       +  D IE         + K  I  +   ++    + 
Sbjct: 423 NDDGLTVAAMDILVPKIGEVIGGSQREDDIE---------KLKSAIIEKGMELEPYWWYN 473

Query: 310 -LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            L  L      +G  +GF+RLVM+VTG +N+ +VI  P 
Sbjct: 474 ELR-LYGSVPHAGFGLGFERLVMMVTGIDNVRDVIPFPR 511


>gi|328950831|ref|YP_004368166.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451155|gb|AEB12056.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 426

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 121/365 (33%), Gaps = 56/365 (15%)

Query: 4   IPSQPWW-NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSM-SLQY 51
           IP + W  N +     R            L  +  +    R+Y     F E+ +   +Q 
Sbjct: 98  IPKEEWRANPETLLEYRYVTLRGEKARAPLQVQAALVRGFRKYLDAAGFTEVYTPKIVQA 157

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
                T++           +  +  YL  SP+   K++L    E+++  A  WR  E   
Sbjct: 158 GAEGGTNLFPVE-------YFEQRAYLAQSPQLY-KQILVGVYERVYEVAPVWRAEEHAT 209

Query: 111 CLHQPEFTMLEWYRAH-ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
             H  E+  L+      ES+E++M+    +IR   E A                      
Sbjct: 210 SRHLNEYLSLDVEMGFIESHEEVMRLETELIRAMLEEARAS------------------- 250

Query: 170 VAEAFARYANID-LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            AE   R   ++      + P    +    +  ++ GI V  D   +D   R L   +  
Sbjct: 251 -AERALRLLGVELPPVPKEIPVLEHQEARRIVKEELGIGVGTD--LNDEAERALGAYVRE 307

Query: 229 NLGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
             G +    + RYP        +  P  P  T+ F+L    +E+ +    +    +    
Sbjct: 308 RYGTD-WVFVHRYPESVRPFYTHPDPERPGLTRSFDLLFRGLEVTSGGQRIHRYEDLVE- 365

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 ++  +  + +     +L      MP   G A+G +RL   + G  N+      P
Sbjct: 366 ----SLQRHGLDPQAF---RGYLEVFKYGMPPHGGFAIGAERLTQKLLGLPNVRYARAFP 418

Query: 347 FSQSN 351
             +  
Sbjct: 419 RDRHR 423


>gi|226948294|ref|YP_002803385.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226840940|gb|ACO83606.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 429

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 57/331 (17%), Positives = 114/331 (34%), Gaps = 39/331 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N I +  RE+  +  F EI +  + +            TE+    +  
Sbjct: 122 RHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVW--EGAEGG----TEVFKVKYFE 175

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
              YL  SP+F  + ++ AG E++F   HA+R  E     H  E+  ++         + 
Sbjct: 176 NTAYLAQSPQFYKQMMVVAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIKDEKD 235

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +++   E  N++   + ++  +   + E                        +
Sbjct: 236 IMEVEERLLKFILEKLNKECKEYFDLLDSELPKIE----------------SEIPKITFK 279

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +L  +  +  +    D     +       K       +    L  YP  +  +  +
Sbjct: 280 EALDILIKEYNKNNLTCDLDPEGEKLI-----CKYAKEKLDSDFIFLTNYPREKRPMYTM 334

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P     T  F+L    IE+      + D          +  E K +  + Y   E +L+
Sbjct: 335 -PLGKDGTHSFDLLFRGIEITTGGQRIHDYNMLV-----DNMEFKGLNPKDY---ESYLS 385

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                MP+  G+A+G +RL   + G  N+ E
Sbjct: 386 AFKYGMPKHGGLAIGLERLTSRLLGLENVRE 416


>gi|262275965|ref|ZP_06053774.1| asparaginyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262219773|gb|EEY71089.1| asparaginyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 469

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 112/358 (31%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          RN +  ++  ++ EN +  + +  +  S       +   ST   
Sbjct: 128 AHLRPRTNVIGAVARVRNCLAQAIHRFYHENGYYWVSAPLITASDAEGAGEMFRVSTLDM 187

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 188 ENLPRTEKGDVDYSEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTSRH 246

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + + K   ++++   +   ++    +  +   F++     V   
Sbjct: 247 LAEFWMVEPEVAFAELDDVAKLAEDMLKYVFKAVLEE----RRDDMEFFAQRIDKDVISR 302

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++   D           D         ++G +      W    +      +       
Sbjct: 303 LEKFVESDFAQV-------DYTDAIDILLKSGKKFEFPVEWGIDLASEHERYLAEEHFKA 355

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 356 PVIVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDILDA 408

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 409 RMREIGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 463


>gi|242060462|ref|XP_002451520.1| hypothetical protein SORBIDRAFT_04g003180 [Sorghum bicolor]
 gi|241931351|gb|EES04496.1| hypothetical protein SORBIDRAFT_04g003180 [Sorghum bicolor]
          Length = 307

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 96/314 (30%), Gaps = 37/314 (11%)

Query: 40  QFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKI 97
            F+ I +  L    S G           +   D+  +   L  SP+   +  +  G  ++
Sbjct: 20  GFVGIHTPKLIGGSSEGGAA--------VFKLDYNGQAACLAQSPQLHKQMAVCGGFGRV 71

Query: 98  FCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQN 156
           F     +R  +     H  EF  L+   A   +   + D ++ +  A           + 
Sbjct: 72  FEVGPVFRAEDSDTHRHLCEFVGLDVEMALRDHYTEVCDVVDRLFVAMFDHLNDKCGKEL 131

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              +     + +       R                D        Q+AG+ V      + 
Sbjct: 132 EAIHRQYPFQPLKYLRTTLRM---------------DYDEGIRMLQEAGVHVDAMGDLNT 176

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNAC 275
              + L + +    G     +L RYP+          P DPR++  F+++    E+ +  
Sbjct: 177 EAEKKLGDLVRDRYGTE-FYMLCRYPSAVRPFYTMPCPEDPRYSCSFDVFVRGEEIISGA 235

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVT 334
             +  P         +   +    +        ++       P   G  +G +R+VML  
Sbjct: 236 QRVHVPD----LLAAQAAAR--GIDVASI--ATYVDAFRYGAPPHGGFGVGLERVVMLFC 287

Query: 335 GANNINEVIWTPFS 348
           G  NI +    P  
Sbjct: 288 GLGNIRKTSLFPRD 301


>gi|196039816|ref|ZP_03107120.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029519|gb|EDX68122.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 432

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 108/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQEILKSKYSKESPVGDLDTEG-EKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K K  +      + +L
Sbjct: 336 PNNENSSITDSFDLLYKGLEITSGAQRIHNYEMLLDSF------KGKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|325956896|ref|YP_004292308.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333461|gb|ADZ07369.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 432

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/350 (17%), Positives = 101/350 (28%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDHRHLWLRSK--KPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVEYFDHDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +    K                     E   +    D
Sbjct: 226 PEMAWMHQDESLDLQERYLAYMIKQVLDKN--------------------EYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFTRLPYDDAVKMLQDAGRDFKWGDDFGAPDEGYISEQY--DRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P            D                     E+    E+   +E  K+      + 
Sbjct: 324 PTSIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEVLKQQILAAGLN 379

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  MGF+R +  V   ++I E I  P  
Sbjct: 380 LEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPRL 426


>gi|227904083|ref|ZP_04021888.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227868102|gb|EEJ75523.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 432

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/350 (17%), Positives = 102/350 (29%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDHRHLWLRSK--KPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVEYFNNDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +    K                     E   +    D
Sbjct: 226 PEMAWMHQDESLDIQERYLAYMVKQVLDKN--------------------EYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFTRLSYDDAIKMLQDAGRDIKWGDDFGAPDEGYISEQY--DRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P            D                     E+    E+   +E  K+  E   + 
Sbjct: 324 PTSIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEVLKQQIEDAGLN 379

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  MGF+R +  V   ++I E I  P  
Sbjct: 380 LEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPRL 426


>gi|153938666|ref|YP_001390367.1| aspartyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152934562|gb|ABS40060.1| aspartate--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295318454|gb|ADF98831.1| aspartate--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 429

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/331 (17%), Positives = 114/331 (34%), Gaps = 39/331 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N I +  RE+  +  F EI +  + +            TE+    +  
Sbjct: 122 RHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVW--EGAEGG----TEVFKVKYFE 175

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQ 131
              YL  SP+F  + ++ AG E++F   HA+R  E     H  E+  ++      E  + 
Sbjct: 176 NTAYLAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKD 235

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +++   E  N++   + ++  +   + E                        +
Sbjct: 236 IMEVEERLLKFILEKLNKECKEYFDLLDSELPKIE----------------SEIPKITFK 279

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +L  +  +  +    D     +       K       +    L  YP  +  +  +
Sbjct: 280 EALDILIKEYNKNNLTCDLDPEGEKLI-----CKYAKEKLDSDFIFLTNYPREKRPMYTM 334

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P     T  F+L    IE+      + D          +  E K    + Y   E +L+
Sbjct: 335 -PLGKDGTHSFDLLFRGIEITTGGQRIHDYNMLV-----DNMEFKGFNPKDY---ESYLS 385

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                MP+  G+A+G +RL   + G  N+ E
Sbjct: 386 AFKYGMPKHGGLAIGLERLTSRLLGLENVRE 416


>gi|49477543|ref|YP_036328.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|49329099|gb|AAT59745.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 432

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 108/339 (31%), Gaps = 40/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R       ++ +  S  E  +EN F  I +  +    G E     F        + +
Sbjct: 124 RHERTTAIFKVKSTLVQSFSELLIENDFTRIFTPKIVSQ-GAEGGANVFKLP-----YFQ 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++A G E++F  A  +R        H  E+  L+        + +
Sbjct: 178 KEAYLAQSPQFYKQMMVAGGLERVFEIAPVYRAEHHNSSRHLNEYISLDVELGFIHDFHE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++R   +   +                      E   +   I++    + P  
Sbjct: 238 VMQLETDVLRYMFQQVAKNC--------------------EKELQLLQIEVPVITEIPKI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  +   +        D  ++   ++L + ++          +  YP     +   
Sbjct: 278 TLLEAQEILKSKYCKESPVGDLDTEG-EKLLGKYVKETYKSE-FVFITHYPKEARPMYTM 335

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+ +    + +       F      K K  +      + +L
Sbjct: 336 PNNENSSITDSFDLLYKGLEITSGAQRIHNYEMLLDSF------KGKGLHPDKF--QSYL 387

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+V  +   +N+ E    P  
Sbjct: 388 NTFRYGCPPHGGFGIGLERIVYKLLELSNVREASAFPRD 426


>gi|260101289|ref|ZP_05751526.1| asparagine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260084874|gb|EEW68994.1| asparagine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 432

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/350 (17%), Positives = 101/350 (28%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDHRHLWLRSK--KPFAIMQIRNTMFKATVDFFEKEDFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   D+     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVDYFDHDAYLSQSGQLY-GEAGAMAFGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +    K                     E   +    D
Sbjct: 226 PEMAWMHQDESLDLQERYLAYMVKQVLDKN--------------------EYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFVRLPYDDAVKMLQDAGRDFKWGDDFGAPDEGYISEQY--DRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P            D                     E+    E+   +E  K+      + 
Sbjct: 324 PTSIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEVLKQQIIDAGLN 379

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  MGF+R +  V   ++I E I  P  
Sbjct: 380 LEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPRL 426


>gi|224004380|ref|XP_002295841.1| aspartate-tRNA ligase or aspartyl tRNA synthetase [Thalassiosira
           pseudonana CCMP1335]
 gi|209585873|gb|ACI64558.1| aspartate-tRNA ligase or aspartyl tRNA synthetase [Thalassiosira
           pseudonana CCMP1335]
          Length = 480

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 52/341 (15%), Positives = 107/341 (31%), Gaps = 29/341 (8%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           +  ++ +    RE      F+EI +  L  +  +E+    F+T     
Sbjct: 161 WLDLRAPANNAIMRIQSAVCQLFRESLYSQGFVEIHTPKLI-AGESESGAGVFTT----- 214

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D+      L  SP+   +  +++  +++F     +R        H  EFT L+   +   
Sbjct: 215 DYFGTTACLAQSPQLYKQMAISSDLDRVFEIGPVFRAENSHTRRHLCEFTGLDLEMSINE 274

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +     + ++ +              +N+      E E I            D    L  
Sbjct: 275 HYMETLEVVHKMFKHIF---------ENLETRWARELEVIRTQYESEPVTFTDEPCVLHW 325

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P+           +  G  +            + +  +          +LD+YP+     
Sbjct: 326 PE------AMEILRGEGFDMGDGLGDLTGAQELALGAVVKEKYGTDFFMLDKYPSDIRPF 379

Query: 249 A-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                P D RF+  ++++    E+C+      DP        K  +  +        ID 
Sbjct: 380 YTMPDPTDDRFSNSYDMFIRGQEICSGAQRCHDPELVTEIINK--KGIEIGDGLKTYIDS 437

Query: 308 DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +   +G  +G +R+V L  G +N+ +    P  
Sbjct: 438 F----RHGVSPHAGAGIGLERVVFLYLGLDNVRKASMFPRD 474


>gi|291296503|ref|YP_003507901.1| asparaginyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290471462|gb|ADD28881.1| asparaginyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 441

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 117/349 (33%), Gaps = 33/349 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  + R         L  R+ ++ ++ ++F    F+ +D+  L  +    T    F 
Sbjct: 116 MDHRHLYLRHRRA--WAVLRVRDELERAIHDFFHARGFVRLDAPILTPNAVEGTT-DLFE 172

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +L       +  YL  S +   +    A   K++ F   +R        H  EF M+E 
Sbjct: 173 VDLFD----GEKAYLSQSGQLYAEAGAMA-FGKVYTFGPTFRAERSKTRRHLLEFWMIEP 227

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A  ++E+ M+    ++         ++   + +          +    A  RY  I  
Sbjct: 228 EVAFMTHEENMQLQEELVVYLV----GRVLENRKLELEMLERDTRVLQTTAQGRYPRISY 283

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              +         ++   AQ+          W D F       +      +    +++YP
Sbjct: 284 TQAV--------EMVNQIAQRKPELGLTPLQWGDDFGAPHEAALTAQ--FDRPIFVEKYP 333

Query: 243 APE-SALANIYPADPRFTKRFE-LYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           A   +      P DPR  K  + L    + E+    + + DP   R +  +    ++   
Sbjct: 334 AAIKAFYMQPDPDDPRLVKNADMLAPEGVGEIIGGSERIHDPELLRQKIREHNLPEEVFD 393

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              + +D      L      +G  +G +R V  + G  +I E I  P  
Sbjct: 394 ---WYMDLR----LFGTVPHAGFGIGLERTVRWICGIEHIREAIPFPRM 435


>gi|154249872|ref|YP_001410697.1| asparaginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154153808|gb|ABS61040.1| asparaginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 432

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/343 (15%), Positives = 111/343 (32%), Gaps = 40/343 (11%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
            +  W R    R+   L  R+ +  ++R+++ E  F+++D+         ET    F  +
Sbjct: 118 HRHLWLRAK--RQFHILRIRDAVIKAIRKFYWERDFVQVDTPIFTG-AIGETAGNLFEVD 174

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
                     +YL  + +   +    A   K+F     +R  +     H  EF M E   
Sbjct: 175 YFDYG----KVYLTQTGQLYLEAACMA-LGKVFNLGPTFRAEKSKTRRHLIEFWMNEAEV 229

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A+  +E  +K   +++    +     ++          S+ E +                
Sbjct: 230 AYYEHEDNVKLQEDLVYYIVQYVLNNVYDDLVAIGRDVSKLEKV---------------- 273

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-A 243
                 +P   + Y +A +   +   D  W D F       +      +    +  YP  
Sbjct: 274 -----QKPFPRMTYTEAVKFLQKQGFDIKWGDDFGGDEETVLAKQ--FDSPLFVTHYPRQ 326

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
            ++      P +P      +L            E++   ++ H ++  ++  K+      
Sbjct: 327 AKAFYMQPDPNNPEVVLCDDL-----LAPEGYGEIIGASQRIHDYDLMVERLKENNLPVE 381

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             D  +L          SG  +G +R +  +    +I E I  
Sbjct: 382 KYDW-YLDLRKFGSVPHSGFGLGVERTIAWIASLEHIREAIPF 423


>gi|203287568|ref|YP_002222583.1| asparaginyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201084788|gb|ACH94362.1| asparaginyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 461

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/355 (16%), Positives = 103/355 (29%), Gaps = 39/355 (10%)

Query: 12  RDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL-- 66
                R   F      +N I   + EYF +N F  I +  +  +   E     F      
Sbjct: 122 PHLRIRTNTFGAVARIKNQISYKIHEYFQKNGFFYIHTPIITSND-GEGVGEIFRVSTLN 180

Query: 67  -----------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                         D   K  +L  + +   +    A   KI+ F   +R        H 
Sbjct: 181 LNNIENKKEIDFKDDFFGKQAFLTVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRHA 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A  + E  +    + ++        +  +  + +   F       V +  
Sbjct: 240 SEFWMIEPEMAFFTLEDNINLAEDFLKY----VLSETLNHCHEDMEFFDNFIEKGVIKKI 295

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                          +         + + A         W           +   + I  
Sbjct: 296 E-------DVINSKFEVITYTQAIKKLENAKKTFEIKPYWGMDLQTEHERYLTEEI-IKK 347

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE-QRHRFEKEMQ 293
            T +  YP    A       D +  K  ++    I       E  D ++   +R ++   
Sbjct: 348 PTTVIDYPKEFKAFYMKMNQDNKTVKGMDILVPRIGEIIGGSEREDNLDKLNNRIKELNL 407

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E + +    + +D   L         SG  +G +RL+   TG  NI +VI  P +
Sbjct: 408 ETETLN---WYLD---LRRF-GSTPHSGFGLGLERLLQYTTGMPNIRDVIPFPRT 455


>gi|257076916|ref|ZP_05571277.1| asparaginyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 429

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 115/347 (33%), Gaps = 39/347 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R   +     L  R+ +  +  +YF +  + ++ +     +   E     F+
Sbjct: 114 LDNRHLWLRSREFT--AVLKIRSTVFKAFADYFYKEDYYQVQAPMFVSTA-TEGGSSLFN 170

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
                 D+  + + L  S +F  + L+ +  EK+F  A ++R  +     H  E+   E 
Sbjct: 171 V-----DYFGEKVNLTQSSQFYLETLIYS-LEKVFTIAPSFRAEKSRTRRHLTEYWHAEG 224

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A  S E +M D   +I+   +   +       +     ++ + I              
Sbjct: 225 EAAWYSNEDMMADEEKMIKYIIDEVLKNNLEDLEIIKRDINKIKNI-------------- 270

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                    P   + Y    +       +  + D         I  +   +    +  YP
Sbjct: 271 -------KIPFERIKYKDLIEKSKEFGMNLKYGDDLGADEEYGIMVH--FDNPIFVTDYP 321

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                    +  DP      E+   ++       E+L   E+ +  ++ +   K+     
Sbjct: 322 ESLKTFY--HRPDPDN--PGEILCHDLLAPEGYGEVLGGGERIYDLQQLLDRIKENNLNP 377

Query: 303 YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 ++          SG  +G DRLVM + G +N+ E I  P +
Sbjct: 378 EDY-YWYVDLRKYGSIPHSGFGLGLDRLVMWICGLSNVRETIPYPRT 423


>gi|260060698|ref|YP_003193778.1| asparaginyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88784828|gb|EAR15997.1| asparaginyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 475

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/376 (16%), Positives = 116/376 (30%), Gaps = 42/376 (11%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R       +  R+ +   + EYF  N F    +  +  S    
Sbjct: 104 PKKHSMEFLREQAHLRIRTNTFAAVMRVRSALAFGVHEYFTRNGFYYFHAPIITGSDAEG 163

Query: 56  ETH------IRAFSTE-------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
                    +   +            +D   K   L  S +   +    A   K++ F  
Sbjct: 164 AGEMFRVSTLDPLTPPRDESGNVDFGEDFFGKETNLTVSGQLEAEAYAMA-LGKVYTFGP 222

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV-NCN 160
            +R        H  EF M+E   A    +  M    + I+       +         +  
Sbjct: 223 TFRAENSNTSRHLAEFWMIEPEMAFYDLDANMDLAEDFIQEVIRYVLKHCEEDLAFLDKR 282

Query: 161 PFSEPEYITVAEAFA-------RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
              E +    AE          R+        +   +  +        ++   +   D  
Sbjct: 283 LEDEEKRKPQAERSGMGLIEKLRFVTDQPFKRVTYTEAIEILRNSKPNKKKKFQYPIDAW 342

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
            +D+ S      +E +    C  IL  YPA   A       D +  +  ++    I    
Sbjct: 343 GADLQSEHERYLVEKH--FQCPVILFNYPAEIKAFYMRLNDDGKTVRAMDILFPGI---- 396

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
              E++   ++  R +   ++ +++  +   +   +L          SG  +GF+RLV  
Sbjct: 397 --GEIVGGSQREERLDVLQEKMQQLGIDEKEL-WWYLDLRRFGTAVHSGFGLGFERLVQF 453

Query: 333 VTGANNINEVIWTPFS 348
            TG  NI +VI  P +
Sbjct: 454 ATGMGNIRDVIPFPRT 469


>gi|15639597|ref|NP_219047.1| asparaginyl-tRNA synthetase [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025835|ref|YP_001933607.1| asparaginyl-tRNA synthetase [Treponema pallidum subsp. pallidum
           SS14]
 gi|6094410|sp|O83618|SYN_TREPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|226695838|sp|B2S3J9|SYN_TREPS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|3322907|gb|AAC65585.1| asparaginyl-tRNA synthetase (asnS) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018410|gb|ACD71028.1| asparaginyl-tRNA synthetase [Treponema pallidum subsp. pallidum
           SS14]
          Length = 523

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 103/384 (26%), Gaps = 61/384 (15%)

Query: 13  DFHYRRRP-FL----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R+ +  ++  +F E  F  + +  +  S       +  F    
Sbjct: 147 HAHLRARTSTFAACARVRSALAGAVHRFFSERHFQYVHTPIITASDCEGAGEL--FRVTT 204

Query: 67  IIQ-----------------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHA 103
                                     D   K   L  S +   +    A   +I+ F   
Sbjct: 205 FDPVRIAREAHAAGAAGNPYALTYADDFFGKAARLTVSGQLQGEAYALA-LTRIYTFGPT 263

Query: 104 WRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           +R        H  EF M+E   A       M      +      A +             
Sbjct: 264 FRAENSNTSRHLSEFWMVEPEIAFARITDCMDVAEEFLAYLLRAALKDCAQDIAFLDERA 323

Query: 163 SEPEYI-----------TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA----GIR 207
           ++               T      R          D    P   L Y +A +     G  
Sbjct: 324 AQHARSARGDTPLAARSTARTPPVRTPGQLTRMLEDVARAPATRLTYTEAIKLLENSGRS 383

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                 W           +   +      I+  YP    A      AD    +  +L   
Sbjct: 384 FEFPVRWGCDLQSEHECFLTEEVFHGPV-IVYDYPKEIKAFYMKLNADGTTVRSMDLLVP 442

Query: 268 NIELCNACDELLDPIEQRHRFEKE-MQEKKKIYNETYPIDEDFLACLT--EMPQSSGIAM 324
            +       E++   E+  +FE    + +   ++   P D  +   L        +G  +
Sbjct: 443 GL------GEIMGGSEREEQFEVLCARIRASGFD---PHDYRWYTDLRRFGTAPHAGFGL 493

Query: 325 GFDRLVMLVTGANNINEVIWTPFS 348
           GF+RL+  VTG  NI +VI  P +
Sbjct: 494 GFERLLQYVTGLGNIRDVIPFPRT 517


>gi|326914570|ref|XP_003203598.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 477

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 96/351 (27%), Gaps = 36/351 (10%)

Query: 11  NRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
                 R       L  R+   +++  +F +N ++ I +  +  +       +  F T  
Sbjct: 142 FPHLRCRSNALGALLRIRSEATAAIHSFFQDNGYVHIHTPIITSNDCEGAGEL--FQTSQ 199

Query: 67  II------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                         P +L  S +    + +A     +F F   +R        H  EF M
Sbjct: 200 EAKESAEKNHFFNVPTFLTVSGQLHL-EAMAGAFTHVFTFGPTFRAENSQSRRHLAEFYM 258

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   +     Q +   M  +   A               + +  P      E   +   
Sbjct: 259 VEAELSFTESLQDIMQVMEHLFKTATSTVFSKCPRDVELFHKYVAPAQKGRLEQMLKNKF 318

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +              +      +QA         W         + +  + G      + 
Sbjct: 319 V----------TISYNEAVEILKQASQTFTFKPEWGCDLQTEHEKYLVKHCGEVPV-FVI 367

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR--FEKEMQEKKK 297
            YP            D        +      L     EL     +  R  F +   ++  
Sbjct: 368 NYPYDLKPFYMRDNEDGPQRTVAAV----DLLVPEIGELCGGSLREERLPFLESRLQRLG 423

Query: 298 I-YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  +  + +D   L          G  MGF+R +  + G +NI +VI  P 
Sbjct: 424 LTDSYQWYLD---LRKF-GSVPHGGFGMGFERYLQYILGVDNIKDVIPFPR 470


>gi|41615317|ref|NP_963815.1| hypothetical protein NEQ535 [Nanoarchaeum equitans Kin4-M]
 gi|40069041|gb|AAR39376.1| NEQ535 [Nanoarchaeum equitans Kin4-M]
          Length = 404

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/331 (16%), Positives = 115/331 (34%), Gaps = 49/331 (14%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           R+     R  +Q   R++F+EN F+EI++  +    G E+    F        +  K  Y
Sbjct: 111 RQTLFRLRAKVQKFFRDWFMENGFVEINTPKIV-IIGAESGAEVFPV-----LYFGKEAY 164

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  + +   K+F  A A+R        H  EFT ++         +   D 
Sbjct: 165 LTQSPQLYKQM-MVSVFPKVFEIAFAYRAEPSRTSRHLAEFTSVDAEMGFI---KDEYDV 220

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           +N I+      ++K    +                         +        D     +
Sbjct: 221 INTIKKMLIDVSEKAMQTK-------------------------EFEELAKPIDLGFEII 255

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-APESALANIYPAD 255
            + +A++      ++D  ++   ++    +E  +       + +YP +           +
Sbjct: 256 TFDEAKEIVKGNPNEDLTTEEERKLGEHFMEEGVSF---VAVTKYPWSERPFYTMRLDDN 312

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P +T+ F++    +E+ +         +           K+K  +      E +L     
Sbjct: 313 PSYTRGFDIIFRGLEIISGAQREHRYEKLLE------NIKEKGIDPNKL--EYYLMAFKY 364

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            MP   G  +G +R +  + G +++ EVI  
Sbjct: 365 GMPPHGGFGLGLERYLRQLLGLDDVREVILF 395


>gi|194246559|ref|YP_002004198.1| asparaginyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|254782878|sp|B3R0I1|SYN_PHYMT RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|193806916|emb|CAP18345.1| Asparaginyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 465

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 107/356 (30%), Gaps = 40/356 (11%)

Query: 12  RDFHYRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
                R +        R+ +  ++ E+F    F+  ++  +  +       +   +T  +
Sbjct: 123 PHLRLRTKIFGSVFRIRSAVFLAIHEFFKNEDFLLTNTPIITVNDGEGAGDLFQITTLNL 182

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            +             D   +  +L  + +    + LA    K++     +R        H
Sbjct: 183 EKLVLTKDKKIDYLKDFFGRKTFLSVTGQLEL-EALATSFNKVYSLGPIFRADNSNTIKH 241

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A  +    ++  M II    +   +        +     E E   + + 
Sbjct: 242 VAEFWMLEVEMAFSN----LEKNMEIIERMLKKVVKSCLLTNQNDLKFLDENESPGLIKK 297

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              +  +     +   +  D         ++G+           F     + +      +
Sbjct: 298 LNEFIGLKSFPKIKYKEAMD------ILIKSGVDFEFKPFHGSDFYTEHEKYLTEVHFKS 351

Query: 234 CCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               +  +P    +    I P          L     EL        +    ++R ++  
Sbjct: 352 PV-FIIDWPKEIKAFYMKINPDKKTVACVDLLVPFVGELVGGSQREENLEILKNRMKELN 410

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              + +        E +L          SG  +GF+RL++ +TG  NI +VI  P 
Sbjct: 411 ISSENL--------EWYLDLRRFGSCVHSGFGLGFERLLIYLTGVENIRDVIAFPL 458


>gi|167470510|ref|ZP_02335214.1| lysyl-tRNA synthetase [Yersinia pestis FV-1]
          Length = 276

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 17/129 (13%)

Query: 1   MHQIPSQPWW--NRDFHYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ + S +R + VE  F+E+++ 
Sbjct: 150 LRPLPDKFHGLADQETRYRQRYLDLIANDESRHTFKVRSQVMSGIRSFMVEKGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F     +RN 
Sbjct: 210 MMQVIPGGAS-ARPFVTH---HNALDIDMYLRIAPELYLKRLVVGGFERVFEINRNFRNE 265

Query: 108 EQGCLHQPE 116
                H PE
Sbjct: 266 GVSPRHNPE 274


>gi|71892195|ref|YP_277928.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|123747818|sp|Q492P3|SYN_BLOPB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|71796301|gb|AAZ41052.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 470

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 116/361 (32%), Gaps = 49/361 (13%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF------- 62
           H R R          R+ +  ++  +  +  FI I +  +      E   + F       
Sbjct: 126 HLRPRTNTIGAVARIRDTLSQAIHNFLHKQGFIWIPTPIITACD-TEGSSKMFCVSTSET 184

Query: 63  ------------STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
                        T     D   K  +L  S + + +    A   K++ F   +R     
Sbjct: 185 QKILNNPNEKLHHTHDTTYDFFSKKAFLTVSGQLNAEAYACA-LSKVYTFGPTFRAEYSN 243

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   A  + + ++    ++++    +  +K         +  ++   IT
Sbjct: 244 TNRHLAEFWMIEPEAAFMTLDDIIILAESLLKNIIRILLEKRSDDIKYLVDKINK-NIIT 302

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E F+           ++ +  +   L     +   +  +   W         + +   
Sbjct: 303 ILENFSEI-------KFNHIEYTEAIKLLEICNR---KFNNPIHWGTDLFSEHEKYLSEE 352

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
              +   I   +P    A       D +     ++    I       E++   ++  R  
Sbjct: 353 YFKSPVIIK-NFPKNIKAFYMRLNDDNKTVASMDILVPGI------GEIIGGSQREERLS 405

Query: 290 KEMQEKKKIYNETYPIDEDF--LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           K + ++ +    T      +  L         SG  +GF+RL++ VTG  NI +VI  P 
Sbjct: 406 K-LDQRLQENCLTQENYWWYRDLR-RYGTVPHSGFGLGFERLMIYVTGIKNIRDVIPFPR 463

Query: 348 S 348
           +
Sbjct: 464 T 464


>gi|261253209|ref|ZP_05945782.1| asparaginyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260936600|gb|EEX92589.1| asparaginyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 466

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  F  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTDKGEVDYNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    + + K   ++++   +   ++             + E IT  
Sbjct: 242 RHLAEFWMVEPEVAFADLDDVAKLSEDMLKFVFKAVLEECRDDLEFFAQRIDK-EAITRL 300

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D          +G        W    S      +     
Sbjct: 301 EQF----------VSSDFAQVDYTDAIQILVDSGREFEFPVEWGIDMSSEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRANDDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DERMREVGIDPEHMNWYRDLRK-YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|119433806|gb|ABL74966.1| Orf (-)2 [Streptoalloteichus hindustanus]
          Length = 433

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 100/339 (29%), Gaps = 39/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R R      +   +  R    +  F E+ +  +  S   E+    F       D+  
Sbjct: 124 RHPRLRAGFEVASASVAGFRAALDDLGFTEVRTPKIVGS-VTESGANVF-----GIDYFG 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAH-ESYEQ 131
           +  YL  SP+   K+ L    E+++     +R        H  ++T L+        +  
Sbjct: 178 RRAYLAQSPQLF-KQALVGVFERVYEVGPVFRAEPHDTTRHLAQYTSLDAELGFVADHHD 236

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    +++    +   ++     ++         +                     P  
Sbjct: 237 VMAVLRDVVARMVDAVAERAAGAVDLLGARLPRVPH-------------------SIPAI 277

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  L A+        +   +    R L E  E          +  YP  +     +
Sbjct: 278 HFAEAQELLARHTAEDPRGEPDLAPAHERWLSEWAERTHDSE-FLFVTGYPMAKRPFYTH 336

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             P  P ++  F+L    +EL      L        R    +    +      P  + ++
Sbjct: 337 PDPERPGYSNSFDLLFRGLELVTGGQRLH-------RRVDYLAALAERGESPEPY-QSYV 388

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G A+G +R    + G +NI EV   P  
Sbjct: 389 DVFAHGMPPHGGFAIGLERWTARLLGVSNIREVTLFPRD 427


>gi|326923086|ref|XP_003207772.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like [Meleagris
           gallopavo]
          Length = 476

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 105/350 (30%), Gaps = 68/350 (19%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ I    RE  +   F+EI +  +  +  +E    
Sbjct: 177 NQDTRLDNRVIDLRTSTSQAVFCLQSGICQLFRETLIRKGFVEIQTPKIISAA-SEGGAN 235

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  + A  EK+FC    +R  +     H  EF  
Sbjct: 236 VFTVSYFKSSA-----YLAQSPQLYKQMCICADFEKVFCVGPVFRAEDSNTHRHLTEFVG 290

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A   +   + D +           Q+ F  +    N     E     E   R   
Sbjct: 291 LDIEMAFNYHYHEVVDEIADTLVQIFKGLQERFQTEIQMVNKQFPCEPFKFLEPTLR--- 347

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                        +        ++AG+ +  ++  S    ++L   ++            
Sbjct: 348 ------------LEYREAVAMLREAGVEMGDEEDLSTPNEKLLGRLVKEK---------- 385

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                            + +  ++++    E+ +    + DP     R      +   I 
Sbjct: 386 -----------------KNSNSYDMFMRGEEILSGAQRIHDPQLLTER-----AKHHGID 423

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E     + ++       P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 424 LEKI---KAYIDSFRFGAPPHAGGGIGLERVTMLYLGLHNVRQTSMFPRD 470


>gi|320100934|ref|YP_004176526.1| asparaginyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753286|gb|ADV65044.1| asparaginyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 432

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 111/352 (31%), Gaps = 46/352 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           + ++  W R   + +   L  ++ +  + REYF  N + E++   L  S   G  T    
Sbjct: 116 LDNRHLWIRSPRFAK--ILKVKHTVLEAGREYFTSNGWWEVNPPILTASACEGGAT---- 169

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L   D+  +  YL  S +   + L+    EK++    ++R        H  E+  L
Sbjct: 170 ----LFPVDYFGQKAYLSQSAQLYLEALIY-VLEKVWSLTPSFRAERSRTRRHLAEYWHL 224

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A  + E +M+    ++        ++                   + +       +
Sbjct: 225 EPEAAWYTMEDMMRVAEELVSHIVRRVLEE---------------RRGDLIDLGRNIERL 269

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                   P +          Q+ G+ +   D       RIL  + E          +  
Sbjct: 270 KPAAEPPYP-RIRYDEAVEILQKKGVNIKWGDDLGADEERILTMEFEK------PFFVTH 322

Query: 241 YPAPE-SALANIYPADPRFTKRFELYACNIELCNACD--ELLDPIEQRHRFEKEMQEKKK 297
           +P    S    + P++P     F+L A               +      +  ++      
Sbjct: 323 FPRQIKSFYMKVDPSNPNVVLGFDLLAPEGYGEIIGGGEREDNYDVLYQKIVEQGL---N 379

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +  + +D             SG  +G +R  M + G ++I + +  P  +
Sbjct: 380 PDDYKWYLDLR----RYGSVPHSGFGLGVERATMWIAGLDHIRDTLPFPRFR 427


>gi|269793269|ref|YP_003318173.1| asparaginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100904|gb|ACZ19891.1| asparaginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 435

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 104/349 (29%), Gaps = 41/349 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+R  +  R+ +  S R +     F+ +DS  L          +  F
Sbjct: 118 LDHRHLWLRSR--RQRCIMAIRDRVILSCRNFLHSKGFMLVDSPILTGSIGEGADGL--F 173

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             +           YL  + +   +   AA   +++CF   +R  +     H  EF M+E
Sbjct: 174 ELDYFDLG----KAYLAQTGQLYLEAA-AAAYGRVYCFGPTFRAEKSKTRRHLTEFWMIE 228

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +   M     ++    +                      +   E    +   D
Sbjct: 229 PEAAFFEHRDNMALQEEMVSHLVKEV--------------------LEHHEKDLVFLERD 268

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +       D P  H+ Y +A +   ++  D  + D F       +           ++ Y
Sbjct: 269 VDALARAVDGPFHHITYDEAVKLLHKLGSDIPYGDDFGGDDETML--TQQFQRPVFVECY 326

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P         +L            E++   ++    +  +   +    
Sbjct: 327 PKKVKAFYMKQHPEREDLVLCDDL-----LAPEGYGEIIGGSQREDDLDLLLSSIRAHNL 381

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  MG +R V  + G  +I E I  P +
Sbjct: 382 PEESY-SWYLDIRRYGSFPHSGFGMGIERAVAWICGLKHIREAIPWPRT 429


>gi|295424854|ref|ZP_06817569.1| asparagine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065420|gb|EFG56313.1| asparagine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 432

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/351 (17%), Positives = 106/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDHRHLWLRSK--KPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVNYFDHDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +                      +   E   R    D
Sbjct: 226 PEMAWMHQDESLDLQERYLAYMVKQV--------------------LDNNEYELRILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFVRLPYDDAVKMLQDAGRDFKWGDDFGAPDEGYISEQY--DRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCN-ACDELLDPIEQRHRFE--KEMQEKKKI 298
           P                 +  + Y C   +      E+    E+   +E  K+  E   +
Sbjct: 324 PTSIKPFYMKKNP-----ENPKEYLCADVIAPEGYGEIFGGSEREGNYEILKQQIEDAGL 378

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E Y     +L          SG  MGF+R +  V   ++I E I  P  
Sbjct: 379 NLEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPRL 426


>gi|86140788|ref|ZP_01059347.1| asparaginyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832730|gb|EAQ51179.1| asparaginyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 479

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 107/376 (28%), Gaps = 44/376 (11%)

Query: 5   PSQPWWNR---DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R       +  R+ +  ++ +YF +  F  +++  +  S    
Sbjct: 108 PKRHTLEKLREQAHLRVRTNTFGAVMRLRSQLSFAVHQYFQKEGFYYVNTPIVTGSDAEG 167

Query: 56  ETHIRAFSTELIIQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
              +  F    +                 D   K   L  S +   +        +I+ F
Sbjct: 168 AGEM--FKVTALDMKNPPKDEDGNIDYKKDFFGKETNLTVSGQLEGETYALG-LGQIYTF 224

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV-- 157
              +R        H  EF M+E   A    +  M    + I+   +              
Sbjct: 225 GPTFRAENSNTSRHLAEFWMIEPEVAFCDLDMNMDLAEDFIKYVIQFVMDNCQDDLKFLE 284

Query: 158 -----NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
                      E E   +         ++      +  +    L   +  +        +
Sbjct: 285 NRLIQEDKSKPEAERAPMPLREKLKFVLENNFKRVSYTEAIEILKNSKPNKKKKFKYPIE 344

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
            W           +       C  IL  YPA   A       D +  +  ++    I   
Sbjct: 345 AWGADLQSEHERFLVEKH-FKCPVILFDYPANIKAFYMRLNEDGKTVRAMDILFPGI--- 400

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
               E++   ++  R E   ++   +      +   +L          SG  +GF+RLV+
Sbjct: 401 ---GEIVGGSQREERLEVLQEKMAALDIPEEEL-WWYLDTRRFGSCVHSGFGLGFERLVL 456

Query: 332 LVTGANNINEVIWTPF 347
             TG  NI +VI  P 
Sbjct: 457 FATGMTNIRDVIPYPR 472


>gi|332291340|ref|YP_004429949.1| asparaginyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169426|gb|AEE18681.1| asparaginyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 480

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 110/374 (29%), Gaps = 40/374 (10%)

Query: 5   PSQPWWNR---DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R       +  R+ +  ++ EYF +N +    +  +  S    
Sbjct: 109 PKRHTLEKLREQAHLRVRTNTFGAVMRLRSKLSFAIHEYFNKNGYFHAHTPIITGSDAEG 168

Query: 56  ETHI---------RAFSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
              +             TE    D+      K   L  S +   +        KI+ F  
Sbjct: 169 AGEMFRVSALDPENPPRTEDGKIDYSKDFFGKETNLTVSGQLEGETYALG-LGKIYTFGP 227

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-------F 154
            +R        H  EF M+E   A    +  M    + I+     A +            
Sbjct: 228 TFRAENSNTSRHLAEFWMVEPEMAFCDLDGNMDLAEDFIKYVINYALENCQDDLEFLENR 287

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
                    E +   +         +D      +  +    L   +  +        + W
Sbjct: 288 LIQEDKSKPEADRAPMPLREKLNFIVDNNFKRVSYTEAIDILRNSKPNKKKKFKYPINEW 347

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
                      +      NC  IL  YPA   A       D +  +  ++    I     
Sbjct: 348 GADLQSEHERYLVEKH-FNCPVILFDYPANIKAFYMRLNEDGKTVRAMDVLFPGI----- 401

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLV 333
             E++   ++  R +   ++   +      +   +L          SG  +GF+RLV+ V
Sbjct: 402 -GEMVGGSQREERLDVLKEKMAALDISEEEL-SWYLDTRKFGTCTHSGFGLGFERLVLFV 459

Query: 334 TGANNINEVIWTPF 347
           TG  NI +VI  P 
Sbjct: 460 TGMTNIRDVIPYPR 473


>gi|159898884|ref|YP_001545131.1| asparaginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|226695297|sp|A9AYM5|SYN_HERA2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|159891923|gb|ABX05003.1| asparaginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 447

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/346 (17%), Positives = 110/346 (31%), Gaps = 29/346 (8%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
            +  W R    ++   L  R  + ++ +EY     F+  DS  L  +   E     F+TE
Sbjct: 120 HRHLWVRSA--KQHALLRIRAQVIAAAQEYLNSEHFVRYDSPILTATAA-EGTSDLFATE 176

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
                      YL  + +   +  + A   +++CF   +R  +     H  EF M+E   
Sbjct: 177 YFDLG----NAYLAQTGQLYVESGM-ATFGRVYCFGPTFRAEKSKTRRHLTEFWMIEPEF 231

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A    +  M+   N +    +    +      +     S+ E I     F R +  +   
Sbjct: 232 AFADQDDNMELQENFVSYIVQRVLDRCEEDLKILERDTSKLENI--VPPFPRISYDEAIE 289

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
            +         +    A  A +       W D F       +      +    +  YP  
Sbjct: 290 KIKQGVAAGATVAPDNAPLADLE------WGDDFGAPHETYLAS--LFDKPLFIYNYPTK 341

Query: 245 E-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKKKIYNET 302
             +         P   +  +L A          E++   ++ H  E  E + ++   +  
Sbjct: 342 VKAFYMQPAEGRPEVVRCADLIAP-----EGYGEIIGGSQRIHDAELLEARIREHGLDVA 396

Query: 303 YPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               + +L          SG  MG +R V  + G  +I E I  P 
Sbjct: 397 DY--QWYLDLRRYGSVPHSGFGMGIERCVAWLAGTRHIREAIPFPR 440


>gi|323497630|ref|ZP_08102647.1| asparaginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323317379|gb|EGA70373.1| asparaginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 466

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  F  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTDKGDVDYNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +   ++             + + IT  
Sbjct: 242 RHLAEFWMVEPEVAFADLNDIAKLSEDMLKFVFKAVLEECRDDLEFFAQRIDK-QAITRL 300

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D          +G        W    S      +     
Sbjct: 301 EQF----------VSSDFAQVDYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRANDDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DERMREVGIDPEHMNWYRDLRK-YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|239625351|ref|ZP_04668382.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519581|gb|EEQ59447.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 455

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/340 (15%), Positives = 104/340 (30%), Gaps = 42/340 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
            + R R     +  I    R+Y     F EI +   +       ++       +   D+ 
Sbjct: 147 RNIRERAKFKIQEGIVRGFRDYLFSQGFTEIHTPKIVARGAEGGSN-------VFKLDYF 199

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            K   L  SP+F  K+ +    +++F  A  +R  +     H  E+T L+    +    +
Sbjct: 200 NKKAELGQSPQFY-KQTMVGVYDRVFETAPVFRAEKHNTTRHLNEYTSLDLEMGYIDGFE 258

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            + D    +        +K +  +                                 P  
Sbjct: 259 DVMDMETGMLQYVMELLRKEYGKELDILKAGLP-------------------DVSRIPAV 299

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  L + +   ++ +          ++    +   G +    +  YP+ +     +
Sbjct: 300 RFDEAKKLVSGKYNRKIRNPYDLEPEEELLIGRYFKEEYGSD-FVFVTHYPSKKRPFYAM 358

Query: 252 YPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRF-EKEMQEKKKIYNETYPIDEDF 309
               D RFT  F+L    +E+      + D      +  +++M  K           E +
Sbjct: 359 DDPEDSRFTLSFDLLFKGLEVTTGGQRIHDYHAILEKMGKRDMDPKDI---------ESY 409

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           L      MP   G+ +G +RL M +    N+ E    P  
Sbjct: 410 LMIFKYGMPPHGGLGIGLERLTMRLLDEQNVRETCMFPRD 449


>gi|156740890|ref|YP_001431019.1| asparaginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|189083276|sp|A7NHQ4|SYN_ROSCS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|156232218|gb|ABU57001.1| asparaginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 440

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 103/348 (29%), Gaps = 38/348 (10%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFST 64
            +  W R    ++   L  R  I ++ +E+     F+  D+  L   +    T++  F+T
Sbjct: 120 HRHLWVRSS--KQHALLRIRAEIIAAAQEWLNAQGFVRFDTPILTPCAAEGTTNL--FAT 175

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
                       YL  + +   +  + +   K++CF   +R  +     H  EF M+E  
Sbjct: 176 PYFDLG----TAYLGQTGQLYVEAGMMS-FGKVYCFGPTFRAEKSKTRRHLTEFWMIEPE 230

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A   ++  +      +    +   ++               E          Y      
Sbjct: 231 VAFALHDDNLALQEQFVSAIVQRVLERRADDLATLERDTKPLERCVPPFPRITY------ 284

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                    D  L  +  + A +       W +         I      +    ++R+P+
Sbjct: 285 ---------DEALRLIAERYAEVEGCTPLEWGEDLGAPHETLIAS--MFDRPVFVERFPS 333

Query: 244 PE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
              +      P  P      +L A     E+      + D      R  +       + +
Sbjct: 334 AIKAFYMEPDPNRPEVALCADLLAPEGYGEIIGGSQRIHDAALLERRIREYGL---NVDD 390

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + ID             SG  MG +R    + G ++I E I  P  
Sbjct: 391 YRWYIDLR----RYGSVPHSGFGMGIERATAWIGGTHHIRETIPFPRM 434


>gi|85057951|ref|YP_456867.1| asparaginyl-tRNA synthetase [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|123766348|sp|Q2NIF5|SYN_AYWBP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|84790056|gb|ABC65788.1| aspartyl/asparaginyl-tRNA synthetase [Aster yellows witches'-broom
           phytoplasma AYWB]
          Length = 503

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/369 (15%), Positives = 112/369 (30%), Gaps = 54/369 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET---------HIR 60
           H R R          RN    +L  +F +  F  I++  +  + G            ++ 
Sbjct: 148 HLRVRTKLFGAVFRIRNTAFFALHSFFQKKGFFHINTPIITPNDGEGVGELFQITTLNLE 207

Query: 61  AFSTELIIQDH-------------------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
                  I +                      K ++L  + +    + +A G  K++ F 
Sbjct: 208 VLPQTKNIPNAFKPVNENTSKKGIDYKKDFFGKKVFLTVTGQLEA-EAMALGLNKVYTFG 266

Query: 102 HAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
             +R+ +     H  EF MLE   A     Q +K    +++        K       +  
Sbjct: 267 PTFRSEKSNTTRHAAEFWMLEPEMAFCDLSQNLKVAQEMLQ----FVISKCLEQNYQDIE 322

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
              + E   + E     A      T+               Q++  +  +   +    + 
Sbjct: 323 FLDKTEKNGLIEELQNIAEEKEFLTVKY------EQALEILQKSNTKFENPLFYGVDLAT 376

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF-TKRFELYACNIELCNACDELL 279
              + +          I+  +P    A       D +       L+    EL        
Sbjct: 377 EHEKYLTEKHFKKPVFIV-DWPKEIKAFYMKNNPDQKTVAAMDLLFPRVGELIGGSQREE 435

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNI 339
           +        EK  Q K    +  + +D   L         SG  +GF+RL++ +TG +NI
Sbjct: 436 NLSVL---IEKMNQMKISQKDLEWYLD---LRRFGGCI-HSGFGLGFERLLIFLTGLDNI 488

Query: 340 NEVIWTPFS 348
            +VI  P +
Sbjct: 489 RDVIAFPRT 497


>gi|27904819|ref|NP_777945.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29839434|sp|P59517|SYN_BUCBP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|27904217|gb|AAO27050.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 466

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 109/377 (28%), Gaps = 57/377 (15%)

Query: 3   QIPSQPWWNRDF----HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMS---LQ 50
            I S+    +      H R R          RN + ++L E+  +N +  I S     L 
Sbjct: 110 PISSKYHTMKHLRNVPHLRSRTNFFGAVSRVRNYLFNALHEFLFKNGYYWIPSPIITGLN 169

Query: 51  YSPGNETHIRAFSTELIIQD---------------HIRKPLYLQTSPEFSCKKLLAAGEE 95
                +     F   ++  +                  K  +L  S + + +    +   
Sbjct: 170 SEGAGDM----FKVSILDLNNIPKNKNGKINFKKDFFGKEAFLTVSGQLTLETYACS-LS 224

Query: 96  KIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
           K++ F   +R        H  EF MLE   A  +   ++K   N+++ A  +   K    
Sbjct: 225 KVYSFGPIFRAENSNTRRHLSEFWMLEVETAFSNLCDIIKFSENMLKYAIGIILDKCVID 284

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
            N       E  +  + +  ++              Q +         ++          
Sbjct: 285 INFFRENVDEKIFCRLKDFSSK-----------QFFQIEYKEAINILIKSNRFDHKVMFI 333

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCN 273
               S      +          ++  YP    A       D +     ++    + E+  
Sbjct: 334 GMELSSDHERFLVEEYFKFPL-VITNYPKSLKAFYMRVNDDNKTVSAMDVLVPGVGEIIG 392

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVM 331
             +          RF +    K+         D  +   L        SG  +GF+RL+ 
Sbjct: 393 GSEREERLNVLDRRFFELNLNKE---------DYWWYRDLRKYGTIPHSGFGLGFERLLS 443

Query: 332 LVTGANNINEVIWTPFS 348
            + G  NI +V   P +
Sbjct: 444 YILGIKNIRDVCPFPRT 460


>gi|256370722|ref|YP_003108547.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009514|gb|ACU52874.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
          Length = 463

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 56/372 (15%), Positives = 104/372 (27%), Gaps = 52/372 (13%)

Query: 1   MHQIPSQPWWNRD-FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-P 53
           +          R+  + R R       L  R+ I  S+ ++F +  FI I++  +     
Sbjct: 112 LQPKTHSFKKLREQAYLRFRTSIFSSILRIRHNISFSIHKFFFKKNFIYINTPIITTYDS 171

Query: 54  GNETHIRAFSTELIIQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIF 98
                +  F                      D      YL  S +    +  A+G  KI+
Sbjct: 172 EGAGEM--FRVTNFDLKKIPLNEKGELNNNLDFFGTSTYLTVSGQL-QGEAAASGLGKIY 228

Query: 99  CFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
            F   +R  +     H  EF M+E   +       M     +++   +            
Sbjct: 229 TFGPTFRAEKSNTFRHLSEFWMIEPEMSFYKLVHNMNFAEKLLKYVIKFV---------- 278

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
                +  E +   E   +         +   +     + Y  A +          W + 
Sbjct: 279 ---INNSYEDLFFLEKKNKRKIFKRLNNV--LESSFERISYTNAIKILKSSKKGINWGED 333

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACD 276
                 + +  N   N   I+  YP            D +     ++    I E+     
Sbjct: 334 LKSEHEKFLAENYFNNP-IIIYNYPLKIKPFYMRINNDNKTVAAMDIIFPYIGEIIGGSQ 392

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
                     R  +     K +          +L          SG  +GF+RL+  +T 
Sbjct: 393 REERYNVLLKRILELNLNIKSL--------WWYLNIRRFGSVPHSGFGLGFERLIQYITN 444

Query: 336 ANNINEVIWTPF 347
            +NI +VI  P 
Sbjct: 445 IDNIKDVIPFPR 456


>gi|219126452|ref|XP_002183471.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405227|gb|EEC45171.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 467

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/367 (14%), Positives = 104/367 (28%), Gaps = 49/367 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNET------HI 59
            H R R          R+ +  ++  +F    F+ + +  +  S      E       ++
Sbjct: 110 AHLRPRTNTIAAVARVRSHLAGAIHAFFQTQGFVYVQTPLVTASDCEGAGELFRVTTLNL 169

Query: 60  RAFSTELIIQDH--------------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
            + ST    ++                 KP YL  S +   +    A    I+ F   +R
Sbjct: 170 DSVSTLPKAKNENGKEQDRVDYSEDFFGKPAYLTVSGQLGGETHACA-LGDIYTFGPTFR 228

Query: 106 NGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                   H  EF M+E   A       M +  N+++   +            +   F +
Sbjct: 229 AENSQTSRHLAEFHMVEPEMAFADLTSAMNNAENMLKYVVQHVLDSCGE----DLEFFQK 284

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILI 223
                      R   +     +    +     L  +  +   +    D ++    +    
Sbjct: 285 FYD---KALMTRLEKLVQKPFVRVSYREAIEFLQEEINKDPSKWQFPDVSFGTDLATEHE 341

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             +           +  YP    A       +       E       L     EL+   +
Sbjct: 342 RWLAET-KFESAVFVYNYPKAIKAFYMRDNEEDGG----ETVNAMDLLVPGVGELIGGSQ 396

Query: 284 QRHRFE--KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           +  R +  ++      +  E Y     +L          +G  +GF+RLV  V G  NI 
Sbjct: 397 REERLDVLEQKIADVGLDKEDY---WWYLDLRRFGSVPHAGYGLGFERLVTYVCGIENIR 453

Query: 341 EVIWTPF 347
           E I  P 
Sbjct: 454 EAIAFPR 460


>gi|153835339|ref|ZP_01988006.1| asparaginyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868153|gb|EDL67310.1| asparaginyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 472

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 131 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 188

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 189 DMENLPRTEEGKVDYNEDFFGKETFLTVSGQLNGEAYACA-LSKVYTFGPTFRAENSNTS 247

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   + A ++       +   F++       
Sbjct: 248 RHLAEFWMVEPEVAFADLNDIAKLSEDMLKYVFKAALEEC----RDDLEFFAQRIDKEAI 303

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++ + D           D          +G        W    S      +     
Sbjct: 304 TRLEKFVSSDFAQV-------DYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHF 356

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 357 KAPVIVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 409

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 410 DERMREIGIDPEHMNWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 466


>gi|89073955|ref|ZP_01160461.1| asparaginyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050283|gb|EAR55787.1| asparaginyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 466

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 109/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------- 58
            H R R          RN +  ++  ++ E  FI + +  +  S      E         
Sbjct: 125 AHLRPRTNVIGAVARVRNSLSQAIHRFYHEQGFIWMSAPLITASDCEGAGEMFRVSTLDM 184

Query: 59  IRAFSTE----LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T+       +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ANLPMTDKGEVDFDKDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +   K   ++++   +   ++         +   + E IT  E 
Sbjct: 244 LAEFWMVEPEVAFADLDDAAKLAEDMLKYVFKAVLEERRDDLEFFASRIDK-EAITRLEQ 302

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F             +  Q D        Q +G +   D  W    S      +       
Sbjct: 303 F----------VTSDFAQVDYTDAIQILQDSGRKFEFDVEWGIDMSSEHERFLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              +   YP    +       D +             L     E++   ++  R +  + 
Sbjct: 353 PVIVK-NYPKDIKSFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDILDA 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 406 RMIEMGIDPEHMSWYRDLR-RYGSVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|224476575|ref|YP_002634181.1| asparaginyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421182|emb|CAL27996.1| putative asparaginyl-tRNA synthetase [Staphylococcus carnosus
           subsp. carnosus TM300]
          Length = 430

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 108/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    ++   +  RN I  +  E+F E  F++ID   L   +P   + +  F
Sbjct: 114 MDHRHLWLRSK--KQHAVMKIRNEIIRATYEFFHETGFVKIDPPILTASAPEGTSEL--F 169

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            T+     +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E
Sbjct: 170 HTK-----YFDEDAFLSQSGQLYLEAAAMAY-GKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +   ++     +    +   +                      E   +  + D
Sbjct: 224 GEMAFYEHADSLEVQEQYVTHVVQSVLKNC--------------------ELELKILDRD 263

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                       R       +    +   D  W + F       I  +   +    +  Y
Sbjct: 264 TSKLEKVKTPFPRITYDDAIEYLKEQGFDDIEWGEDFGASHETAIANHY--DLPVFITNY 321

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH--RFEKEMQEKKKI 298
           P           P +       +L A          E++   E+ +     +E  E+ ++
Sbjct: 322 PTKIKPFYMQPNPENEETVLCADLIAP-----EGYGEIIGGSERINDLELLEERIEEHQL 376

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E+Y    D           SG  +G +R V  ++G  ++ E    P  
Sbjct: 377 DRESYNYYLDLRR--YGSVPHSGFGLGLERTVAWISGVEHVRETAPFPRL 424


>gi|197294192|ref|YP_001798733.1| asparaginyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|226695300|sp|B1V8X4|SYN_PHYAS RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|171853519|emb|CAM11361.1| Asparaginyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 457

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/370 (14%), Positives = 107/370 (28%), Gaps = 51/370 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PG 54
           +  IP         H R R          R+    +L  +F +  F  I++  +  +   
Sbjct: 116 LRTIP---------HLRTRTKLFGAVFRIRSTAFFALHHFFHKKGFFHINTPIITPNDGE 166

Query: 55  NETHI--------------RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
               +              +  +      D   K ++L  + +    + +A    K++ F
Sbjct: 167 GAGELFQLTSLNLERLSQEKPSTINYQK-DFFGKKVFLTVTGQLEA-EAMALALNKVYTF 224

Query: 101 AHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R  +     H  EF MLE   A    +Q +K    +++       Q+         
Sbjct: 225 GPTFRAEKSNTPRHAAEFWMLEPEMAFCDLKQNLKVAQEMLQEVVVQCLQENQK------ 278

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
               + E++           +                       +G+   +   +    +
Sbjct: 279 ----DIEFLDQTVRNGLLQELKNVVQEKEFLVITYQKAIEILASSGVAFENKVFYGSDLA 334

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
               + +           +  +P    A       D +     +L    +          
Sbjct: 335 TEHEKFLTEKH-FQKPVFIIDWPKEIKAFYMKNNPDQKTVAAMDLLIPRVGELIGGS--- 390

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
               QR      + EK +         E +L          SG  +GF+RL++ +TG +N
Sbjct: 391 ----QREENLAVLIEKMQQMKIPQKEFEWYLDLRRFGSCIHSGFGLGFERLLLFLTGLDN 446

Query: 339 INEVIWTPFS 348
           I +VI  P +
Sbjct: 447 IRDVIAFPRT 456


>gi|148379009|ref|YP_001253550.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933421|ref|YP_001383393.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936074|ref|YP_001386940.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|148288493|emb|CAL82572.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929465|gb|ABS34965.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152931988|gb|ABS37487.1| aspartate--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 429

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/331 (17%), Positives = 114/331 (34%), Gaps = 39/331 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N I +  RE+  +  F EI +  + +            TE+    +  
Sbjct: 122 RHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVW--EGAEGG----TEVFKVKYFE 175

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQ 131
              YL  SP+F  + ++ AG E++F   HA+R  E     H  E+  ++      E  + 
Sbjct: 176 NTAYLAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKD 235

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +++   E  N++   + ++  +   + E                        +
Sbjct: 236 IMEVEERLLKFILEKLNKECKEYFDLLDSELPKIE----------------SEIPKITFK 279

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +L  +  +  +    D     +       K       +    L  YP  +  +  +
Sbjct: 280 EALDILIKEYNKNNLTCDLDPEGEKLI-----CKYAKEKLDSDFIFLTNYPREKRPMYTM 334

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P     T  F+L    IE+      + D          +  E K    + Y   E +L+
Sbjct: 335 -PLGKDGTHSFDLLFRGIEITTGGQRIHDYNMLV-----DNMEFKGFNPKDY---ESYLS 385

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                MP+  G+A+G +RL   + G  N+ E
Sbjct: 386 AFKYGMPKHGGLAIGLERLTSRLLGLENVRE 416


>gi|156309317|ref|XP_001617688.1| hypothetical protein NEMVEDRAFT_v1g225882 [Nematostella vectensis]
 gi|156195285|gb|EDO25588.1| predicted protein [Nematostella vectensis]
          Length = 287

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 25/156 (16%)

Query: 1   MHQIP----------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVEN 39
           +  +P             + + +  YR+R              +KR  + +++RE+F   
Sbjct: 136 LKPLPLPKTDAEGNTFDEFNDPELRYRQRYADLVVNPHVKEVFVKRTKLFNAMREFFNNA 195

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
            + E+++  LQ  PG     R F T     + +  PLY++ + E   K+L+  G + ++ 
Sbjct: 196 GYFEVETPILQPIPGGAA-ARPFITH---HNSLDIPLYMRIANELYLKRLIVGGFDGVYE 251

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
           F+  +RN      H PEFT +E Y +++ Y  +M  
Sbjct: 252 FSKNFRNEGMDRTHNPEFTAMEIYVSYKDYNWMMDF 287


>gi|330862355|emb|CBX72514.1| putative lysyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 223

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 29/241 (12%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           LLKR  I + +R +F +   +E+++ ++  +   + H+  F T  +  
Sbjct: 7   WQPSAPI---ANLLKRAAIMAEIRRFFADRGVLEVETPTMSQATVTDIHLVPFQTRFVGP 63

Query: 70  DHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LY+ TSPE+  K+LLAAG   I+    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GAADGLTLYMMTSPEYHMKRLLAAGSGSIYQLGRSFRNEEAGRHHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             +LM +  ++++   +  +                 E ++  +AF R+ +ID       
Sbjct: 124 MYRLMDEVDDLLQQILDCDSS----------------ERLSYQQAFLRHLDID------- 160

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           P   D+  L   A +  +    D  +    +   +    +EP++G +    +  +PA ++
Sbjct: 161 PLSADKAQLREAAAKLDLSNIADTEEDRDTLLQLLFTVGVEPHIGRDKPAFVYHFPASQA 220

Query: 247 A 247
            
Sbjct: 221 P 221


>gi|323453878|gb|EGB09749.1| hypothetical protein AURANDRAFT_71352 [Aureococcus anophagefferens]
          Length = 864

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 106/358 (29%), Gaps = 39/358 (10%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS----PG---------N 55
            H R R          R+ +  +   +F +  F  + S  +  S     G          
Sbjct: 158 AHLRPRTNTLAAAARLRSCLAQATHRFFEQEGFAYVHSPIITASDCEGAGEMFRVTSLSG 217

Query: 56  ETHIRAFSTEL-IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
           +   +A + E     D   +  +L  S + S +    A    ++ F   +R        H
Sbjct: 218 DALAKAATKENGFEDDFFARSAFLTVSGQLSAETYACA-MGDVYTFGPTFRAENSQTSRH 276

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +  + M +   +++     A  K  +        + + E +    +
Sbjct: 277 LAEFWMIEPEMAFATITEAMDNAEALLKSTIAAALDKCGADLKFCDQFYGDKELLDRLTS 336

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
            A  A        D  D     +    ++        D  +    +      +       
Sbjct: 337 IATGAPFVRLKYADAVDVLRAEIAKDPSKW----QFPDVEFGTDLATEHERWLAETHCGG 392

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            C  +  YP    +       D      F+L A  +              QR     +++
Sbjct: 393 NCVFVYDYPRTIKSFYMRDNDDGETVAAFDLLAPGVGELVGGS-------QREERTDKLE 445

Query: 294 EK---KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K     +  E Y     +L          +G  +GFDRLV  V+   NI + I  P 
Sbjct: 446 AKMVEFGLDPEDY---WWYLDLRKYGSVPHAGYGLGFDRLVCYVSAIENIRDSIPYPR 500


>gi|332638896|ref|ZP_08417759.1| asparaginyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 431

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 107/351 (30%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  +    H +    L  RN I ++  E+F +  F++IDS  L   +P         
Sbjct: 115 MDHRHLYL--RHIQPFAVLRIRNTIIAATYEFFNKEGFVKIDSPILTGSAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   ++     Y+  + +   +    A   ++F F   +R  +     H  EF M+E
Sbjct: 166 TTELFHTEYFDTDAYMSQTGQLYAEAGAMA-FGRVFTFGPTFRAEKSKTRRHLTEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  + +  ++     I    +                      +   +        D
Sbjct: 225 PEMAWMTQDDSLEVQERYIAYLIQAV--------------------LDRNQYELDLLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                     P   + Y  A +       D  W   F       +  +        +  +
Sbjct: 265 KELLQSYTQLPYPRVSYDDAIKLLQENDFDVEWGVDFGSPEETFLANHFA--KPVFITNF 322

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           P    +     +P         +L A     E+    +   D      R +++      +
Sbjct: 323 PKEIKAFYMKRHPDRDDVVISADLLAPEGYGEIIGGSERDTDYDYLEQRIKEQ-----GL 377

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + Y     +L          SG  +G +R V  +TG  +I E I  P +
Sbjct: 378 DLKEY---SWYLDLRKYGSVPHSGFGLGLERAVTWITGEEHIREAIPFPRT 425


>gi|46199389|ref|YP_005056.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|46197014|gb|AAS81429.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 422

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 63/363 (17%), Positives = 109/363 (30%), Gaps = 54/363 (14%)

Query: 4   IPSQPWW-NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
           IP + W  N D     R            L  +  +    R Y     F EI +  +  +
Sbjct: 96  IPKEEWRANPDTLLEYRYVTLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRA 155

Query: 53  -PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR-NGEQG 110
                + +          D+  K  YL  SP+   K+++    E+++  A  WR      
Sbjct: 156 GAEGGSGL-------FGVDYFEKRAYLAQSPQLY-KQIMVGVFERVYEVAPVWRMEEHHT 207

Query: 111 CLHQPEFTMLEWYRAH-ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
             H  E+  L+         E LM+    ++    E A         +    +       
Sbjct: 208 SRHLNEYLSLDVEMGFIADEEDLMRLEEALLAEMLEEALNTAGDEIRLLGATWPSFP--- 264

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
                            D P         +  ++ G  V  D   S+   R+L E  +  
Sbjct: 265 ----------------QDIPRLTHAEAKRILKEELGYPVGQD--LSEEAERLLGEYAKER 306

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
            G +    + RYP            D   T+ F+L    +E+ +    +    E     +
Sbjct: 307 WGSD-WLFVTRYPRSVRPFYTYPEED-GTTRSFDLLFRGLEITSGGQRIHRYEELLESLK 364

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 K +  E +     +L      MP   G A+G +RL   + G  N+      P  
Sbjct: 365 A-----KGMDPEAFQ---GYLEVFKYGMPPHGGFAIGAERLTQKLLGLPNVRYARAFPRD 416

Query: 349 QSN 351
           +  
Sbjct: 417 RHR 419


>gi|257456472|ref|ZP_05621668.1| asparaginyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257446132|gb|EEV21179.1| asparaginyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 473

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 100/365 (27%), Gaps = 51/365 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------- 58
            H R R          RN +  ++  +F E+ F  + +  +  S      E         
Sbjct: 124 AHLRARTNTFGAVARVRNQMAFAVHNFFQEHGFQYVHTPLITASDSEGAGEMFQVTTLDM 183

Query: 59  -----------IRA--FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                           F  +   QD   +  YL  S +   +    A   +++ F   +R
Sbjct: 184 QEIVRKALKDKADPATFILDY-KQDFFERAAYLTVSGQLEIETYATA-LSRVYTFGPTFR 241

Query: 106 NGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                   H  EF M+E   +    E  M      +    + A     +      N   +
Sbjct: 242 AENSNTTRHLSEFWMIEPEMSFFRLEDNMDLAEKFVVYLLKWALTHCRADLEF-FNAQIK 300

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
           P  I   E                  +        + ++          W         +
Sbjct: 301 PGLIETLEHVVE----------SKFTRITYTDAVKELEKHASEFEFKPFWGCDLQSEHEK 350

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +   +      I+  YP    A       D +  +  ++    +       E  D +  
Sbjct: 351 YLTEQVFKGPV-IVTDYPKEIKAFYMKQNDDGKTVRAMDVLVPGLGEIIGGSEREDNLAA 409

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                   +  +   +        +L          SG  +GFDRL++ VTG  NI +VI
Sbjct: 410 LE-----TRMNELGLD--MKNYWWYLDLRRYGSVPHSGFGLGFDRLLLYVTGMANIRDVI 462

Query: 344 WTPFS 348
             P +
Sbjct: 463 PYPRT 467


>gi|241889980|ref|ZP_04777278.1| asparaginyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863602|gb|EER67986.1| asparaginyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 428

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 111/349 (31%), Gaps = 46/349 (13%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
           ++  W R    ++   L  RN +  S  ++F +  F++ D   L  S P         +T
Sbjct: 114 NRHIWIRSK--KQHAILTIRNQVIKSTYDFFEKEGFLKTDPPILTSSAPEG-------TT 164

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           EL    +  +  YL  S +    +  A    K+F F   +R  +     H  EF M+E  
Sbjct: 165 ELFNTKYFDEEAYLSQSGQLYL-EATAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEAE 223

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A  ++++ +      +        +K                     +   +    DL 
Sbjct: 224 MAFCNHDESLALQEAYVNHLLTDVLEKC--------------------QEQLKVLGRDLE 263

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
              +   +  R       Q        D  + D F       I      N    +  +P 
Sbjct: 264 ALENARGEFPRIKYKDAIQLLKDNGFDDIEYGDDFGSPHETFIA--NSYNKPVFITHWPL 321

Query: 244 PESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKKIYN 300
                  I  P +P      +L A          E++   ++   ++K  E  +K  +  
Sbjct: 322 DIKPFYMIEDPNEPGVVLCADLIAP-----EGYGEIIGGSQRIDDYDKLLENIKKHDLNL 376

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E Y     +L        + +G  +G +R V  +TG  ++ E    P  
Sbjct: 377 EAYG---WYLDLRKYGSVEHAGFGLGLERTVAWITGNGHVRETAPFPRL 422


>gi|325971584|ref|YP_004247775.1| asparaginyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026822|gb|ADY13581.1| Asparaginyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 462

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 49/353 (13%), Positives = 105/353 (29%), Gaps = 39/353 (11%)

Query: 15  HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           H R R  +       RN +  ++ ++F E  F  +++  +  S       +   T L + 
Sbjct: 122 HLRARTNMFGAVARVRNTLSYAVHQFFQERGFAYVNTPIISASDAEGAGEQFLVTTLDLH 181

Query: 70  D--------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
           +                 +  +L  S +   +    A  + I+ F   +R        H 
Sbjct: 182 NIPKTEEGKIDYSKDFFGREAFLTVSGQLEGETYAMA-LKNIYTFGPTFRAENSNTKRHL 240

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       +   M +     +   + +      +   FS+     + +  
Sbjct: 241 AEFWMVEPEMAF----CELDGNMEVAESFLKYLFKTVLEKCPEDMAFFSKFVEAGMEQTL 296

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                                    + ++          W         + +   +    
Sbjct: 297 QHIVETPFAHMTYTE-------AVKELERHNELFEFPVAWGSDLQSEHEKFLTE-VVCKR 348

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I+  YP    A      AD +  +  ++    +       E    ++      ++++ 
Sbjct: 349 PVIVTDYPKEIKAFYMRLNADEKTVRGMDVLVPRLGEIIGGSEREANLDTLIARMQQLKL 408

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             K  +  + +D   L         +G  +GF+R V  +TG  NI +VI  P 
Sbjct: 409 DPK--DYWWYLD---LRRF-GSVPHAGFGLGFERAVQYITGMGNIRDVIPYPR 455


>gi|295693031|ref|YP_003601641.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295031137|emb|CBL50616.1| Asparaginyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 432

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 101/350 (28%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDHRHLWLRSK--KPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVEYFDHDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +                      +   E   +    D
Sbjct: 226 PEMAWMHQDESLDIQERYLAYMVKQV--------------------LENNEYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFVRLPYDDAIKMLQDAGRDIKWGDDFGAPDEGYISEQY--DRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P            D                     E+    E+   +E  K+      + 
Sbjct: 324 PTSIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEVLKQQILDAGLN 379

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  MGF+R +  V   ++I E I  P  
Sbjct: 380 LEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPRL 426


>gi|260947822|ref|XP_002618208.1| hypothetical protein CLUG_01667 [Clavispora lusitaniae ATCC 42720]
 gi|238848080|gb|EEQ37544.1| hypothetical protein CLUG_01667 [Clavispora lusitaniae ATCC 42720]
          Length = 499

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 119/351 (33%), Gaps = 28/351 (7%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH-IRAFSTE 65
           H R R       L  R+ ++     +F +N F ++    +  S      E   I  F+  
Sbjct: 152 HLRHRTATLASILRFRSRVEQHAMNFFAKNGFTKVAPPLITSSDCEGAGEMFSIEPFTKA 211

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
              +    +  +L  S +    ++LA    +++     +R  +     H  EF MLE   
Sbjct: 212 DSKEKFFGQDAFLTVSTQLHL-EVLAPSLNRVWTLTPCFRAEQSNTNRHLSEFWMLEAEV 270

Query: 125 AH-ESYEQLMKDCMNIIRCAAEVANQKIFSF----QNVNCNPFSEPEYITVAEAFARYAN 179
            + E+  QL     + IR  A+              ++    +SE E + V +       
Sbjct: 271 CYVENISQLTDLVEDSIRSIAKDLKTDPPLQAGGLNDLTKARYSESEQLLVQQRCDSLLG 330

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            +   ++   +  D     + + +   R  +  TW D  S    + +      +    + 
Sbjct: 331 ENRWPSITYTEAID----IINSVKNKGRSKNRMTWGDSISTEQEKWLAGTHFQSPV-FVT 385

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKK 297
            YP  +              +R    AC   +     EL+    + HR ++  +   ++ 
Sbjct: 386 DYPREQKPFYMPLSKYGLDKER-PTVACFDLIVPEFGELVGGSLREHRHDELHQEIIRRG 444

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  E+      +L+          G  MGF+RL+  +    NI ++   P 
Sbjct: 445 MNAESMQ---WYLSLRQNGTVPHGGFGMGFERLIAYLAAIENIKDISAFPR 492


>gi|116004531|ref|NP_001070623.1| probable asparaginyl-tRNA synthetase, mitochondrial [Danio rerio]
 gi|115313081|gb|AAI24278.1| Zgc:153218 [Danio rerio]
          Length = 485

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 50/348 (14%), Positives = 96/348 (27%), Gaps = 33/348 (9%)

Query: 11  NRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
                 R   F   L  R+   ++++ +F ++ +++I +  +  +       +  F  E 
Sbjct: 149 FPHLRCRTNAFSSMLRIRSEATAAIQSFFRDHGYVQIHTPVITSNDCEGAGEL--FQVEP 206

Query: 67  II-------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                          P YL  S +    +++A     ++ F   +R        H  EF 
Sbjct: 207 TGDKKDSDDPHFFSVPAYLTVSGQLHL-EVMAGAFSAVYTFGPTFRAENSQSRRHLAEFY 265

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           M+E   A       +   M  +    + A + +FS    +   F +       E      
Sbjct: 266 MVEAEIAFTESLDDLMKVMEDL---FKAATEHVFSNCTEDVELFHKHVAPGHREQVDPML 322

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
           N                      + +         W         + +  + G     ++
Sbjct: 323 NRKFNVISYTE-------AIDILKSSSQNFTFSPEWGRDLQTEHEKFLVKHCGNTPVFVV 375

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP            D        +      L     EL     +  R +   Q   + 
Sbjct: 376 -NYPYELKPFYARDNQDHPRHTAAAV----DLLVPGVGELCGGSLREERLQLLTQRLSQA 430

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             E       +L           G  MGF+R +  + G NNI + I  
Sbjct: 431 GLEDTY--AWYLQLREFGSVPHGGFGMGFERYLQCILGLNNIKDAIPF 476


>gi|227878662|ref|ZP_03996577.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256850385|ref|ZP_05555813.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|312977490|ref|ZP_07789238.1| asparagine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227861726|gb|EEJ69330.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256712782|gb|EEU27775.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|310895921|gb|EFQ44987.1| asparagine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 432

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 101/350 (28%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDHRHLWLRSK--KPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVEYFDHDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +                      +   E   +    D
Sbjct: 226 PEMAWMHQDESLDIQERYLAYMVKQV--------------------LENNEYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFVRLPYDDAIKMLQDAGRDIKWGDDFGAPDEGYISEQY--DRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P            D                     E+    E+   +E  K+      + 
Sbjct: 324 PTSIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEILKQQILDAGLN 379

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  MGF+R +  V   ++I E I  P  
Sbjct: 380 LEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPRL 426


>gi|312218276|emb|CBX98222.1| hypothetical protein [Leptosphaeria maculans]
          Length = 1039

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/384 (15%), Positives = 112/384 (29%), Gaps = 51/384 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--- 52
           +  +P         H R R       L  R+++ + +  YF ++ F++  +  +  S   
Sbjct: 157 LRTLP---------HLRSRLPFNSLILRLRSLVTAHVTSYFAKHDFVQCHTPIITSSDCE 207

Query: 53  PGNETHIRAFSTELIIQDH--------------IRKPLYLQTSPEFSCKKLLAAGEEKIF 98
              E    A                           P YL  S +    + LA    K++
Sbjct: 208 GAGEVFTVAPEVPSPATPEATSTNQMKQREDLFFGSPKYLTVSGQLHL-EALAQSVNKVW 266

Query: 99  CFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMN-IIRCAAEVANQKIFSFQN 156
             + A+R  +     H  EF MLE   A       + D +  ++R             + 
Sbjct: 267 TLSPAFRAEKSDTARHLSEFYMLEAELAFVDDVNQIMDVVEDMLRSVTSEVKSSTVGHEL 326

Query: 157 VNCN---PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
           +         E   ++      R+  +  G             L     Q  +       
Sbjct: 327 LEARAQAHEQEDGGVSPDTLVQRWQGLVAGPWPRITYGNAVQHLKDAVAQGKVSFEFAPG 386

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-IYPADPRFTKRFELYACNIELC 272
            +D         +  ++G+     +  YP            +     +     AC   L 
Sbjct: 387 HADGLQTEHERYLAESVGLGGPVFVTDYPRNIKPFYMAPSTSMQTEAQAATTVACFDLLV 446

Query: 273 NACDELLDPIEQRHRFEK----------EMQEKKKIYNETYPID--EDFLA-CLTEMPQS 319
               EL+    + HR  +          +  E     +E    D  + ++          
Sbjct: 447 PEICELVGGSMREHRLHELLQAMKEHGLQGAEGAADGDEAATEDALQWYVDLRRYGSVPH 506

Query: 320 SGIAMGFDRLVMLVTGANNINEVI 343
            G  +GFDRL+  ++G +NI + +
Sbjct: 507 GGFGLGFDRLLCYLSGVSNIRDCL 530


>gi|256843258|ref|ZP_05548746.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|293380922|ref|ZP_06626956.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|256614678|gb|EEU19879.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|290922497|gb|EFD99465.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 432

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 101/350 (28%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDHRHLWLRSK--KPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVEYFDHDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +                      +   E   +    D
Sbjct: 226 PEMAWMHQDESLDIQERYLAYMVKQV--------------------LENNEYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFVRLPYDDAIKMLQDAGRDIKWGDDFGAPDEGYISEQY--DRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P            D                     E+    E+   +E  K+      + 
Sbjct: 324 PTSIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEILKQQILDAGLN 379

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  MGF+R +  V   ++I E I  P  
Sbjct: 380 LEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPRL 426


>gi|238060362|ref|ZP_04605071.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237882173|gb|EEP71001.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 428

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/339 (17%), Positives = 101/339 (29%), Gaps = 44/339 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H  R   L       +  R       F+EI +  +  S   E+    F       D   
Sbjct: 124 RHPLRSAALRVSAAAVAGFRATLDARHFVEIHTPKVVAS-STESGANVF-----ALDWFG 177

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHE-SYEQ 131
           +P YL  SP+F  K+L+    E+++     +R        H  ++T L+        +  
Sbjct: 178 RPAYLAQSPQFY-KQLMVGVFERVYEVGPVFRAEPHDTARHLAQYTSLDAELGFVGDHTD 236

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    + +         +  +              +TV    AR   +     L     
Sbjct: 237 VMVVLRDTLAGMLATVADRAGAALATLG--------VTVPPVPARIPAVRFTEALAIAGA 288

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
           P        A +  +           F                   +  YP  +     +
Sbjct: 289 PADEPDLAPAHERALGEWARREHGSEF-----------------VFVTGYPMAKRPFYTH 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             PA P ++  F+L    +EL      L        R++  +           P+   ++
Sbjct: 332 PDPARPAYSNGFDLLFGGLELVTGGQRLH-------RYDDYLAALAARGEPVEPV-AGYV 383

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 MP   G A+G +R V  + GA N+ EV   P  
Sbjct: 384 DAFRHGMPPHGGFAIGLERFVARLVGAANVREVTAFPRD 422


>gi|26553856|ref|NP_757790.1| asparaginyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|38258377|sp|Q8EW03|SYN_MYCPE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|26453863|dbj|BAC44194.1| asparaginyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 453

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 110/343 (32%), Gaps = 26/343 (7%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R+R       +  R+ +  ++  +F +N F+ + S  +  +         +     +
Sbjct: 121 AHLRQRTNKYGTIMRLRSELAFAIHNFFHQNNFVWVSSPIITSNDAEGAGENFYVDSKTV 180

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE 127
           ++   K   L  S +   +    +  ++++ F   +R  +     H  EF M+E   A  
Sbjct: 181 KNFFGKNASLTVSGQMHAEAYAQSY-KRVYTFGPTFRAEKSNTNRHVSEFWMVEPEIAFC 239

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
           + EQLM      ++                     ++    T++E       I       
Sbjct: 240 NLEQLMYLIEEFVKYLIRFI----LKNCKDEMTFLNKLSNNTLSEKLLNA--ISHPFEKI 293

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
              +    L    A +          +    +    + +      N    +  YPA   A
Sbjct: 294 TYKKAIAILKSDVANKKVKFENESIYFGMDLNSEHEKYLCEK-VFNKPLFIYDYPAEIKA 352

Query: 248 LANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                 AD       +L    I E+    +   D  +   +  K   + + I        
Sbjct: 353 FYMKMNADGTTVGACDLLMPGIGEIVGGSERESDYTKLVKKCTKANMKVEDI-------- 404

Query: 307 EDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E +L  L      +S+G  +GF+R +M VT   N+ + I  P 
Sbjct: 405 EWYL-ALRKYGYHKSAGFGLGFERFLMYVTECENVKDTIPFPR 446


>gi|55981421|ref|YP_144718.1| aspartyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|30749602|pdb|1N9W|A Chain A, Crystal Structure Of The Non-Discriminating And Archaeal-
           Type Aspartyl-Trna Synthetase From Thermus Thermophilus
 gi|30749603|pdb|1N9W|B Chain B, Crystal Structure Of The Non-Discriminating And Archaeal-
           Type Aspartyl-Trna Synthetase From Thermus Thermophilus
 gi|304445796|pdb|3KFU|A Chain A, Crystal Structure Of The Transamidosome
 gi|304445797|pdb|3KFU|B Chain B, Crystal Structure Of The Transamidosome
 gi|304445798|pdb|3KFU|C Chain C, Crystal Structure Of The Transamidosome
 gi|304445799|pdb|3KFU|D Chain D, Crystal Structure Of The Transamidosome
 gi|7385087|gb|AAF61689.1| aspartyl-tRNA synthetase 2 [Thermus thermophilus]
 gi|55772834|dbj|BAD71275.1| non-discriminating and archaeal-type aspartyl-tRNA synthetase
           [Thermus thermophilus HB8]
          Length = 422

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 63/363 (17%), Positives = 109/363 (30%), Gaps = 54/363 (14%)

Query: 4   IPSQPWW-NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
           IP + W  N D     R            L  +  +    R Y     F EI +  +  +
Sbjct: 96  IPKEEWRANPDTLLEYRYVTLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRA 155

Query: 53  -PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR-NGEQG 110
                + +          D+  K  YL  SP+   K+++    E+++  A  WR      
Sbjct: 156 GAEGGSGL-------FGVDYFEKRAYLAQSPQLY-KQIMVGVFERVYEVAPVWRMEEHHT 207

Query: 111 CLHQPEFTMLEWYRAH-ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
             H  E+  L+         E LM+    ++    E A         +    +       
Sbjct: 208 SRHLNEYLSLDVEMGFIADEEDLMRLEEALLAEMLEEALNTAGDEIRLLGATWPSFP--- 264

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
                            D P         +  ++ G  V  D   S+   R+L E  +  
Sbjct: 265 ----------------QDIPRLTHAEAKRILKEELGYPVGQD--LSEEAERLLGEYAKER 306

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
            G +    + RYP            D   T+ F+L    +E+ +    +    E     +
Sbjct: 307 WGSD-WLFVTRYPRSVRPFYTYPEED-GTTRSFDLLFRGLEITSGGQRIHRYEELLESLK 364

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 K +  E +     +L      MP   G A+G +RL   + G  N+      P  
Sbjct: 365 A-----KGMDPEAFH---GYLEVFKYGMPPHGGFAIGAERLTQKLLGLPNVRYARAFPRD 416

Query: 349 QSN 351
           +  
Sbjct: 417 RHR 419


>gi|154341471|ref|XP_001566687.1| aspartyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064012|emb|CAM40203.1| putative aspartyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 550

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 116/349 (33%), Gaps = 35/349 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
                ++ +    R++ +++ F EI S  +  +P +E     F  E     +  +  YL 
Sbjct: 211 AIFRLQSRVCQYFRQFLIDSDFCEIHSPKIINAP-SEGGANVFKLE-----YFNRFAYLA 264

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            SP+   + +L     ++F     +R+       H  EF  L+       +   + D   
Sbjct: 265 QSPQLYKQMVLQGDVPRVFEVGPVFRSENSNTHRHLTEFVGLDVEMRINEHYYEVLDLAE 324

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
            +            + +  +       E +           + +G   +  +  D++   
Sbjct: 325 SLFNYMFEHLATH-TKELKDVCQQYPFEPLVWKVTPETMKELGVGVISEGVEPTDKYQAR 383

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC-----------------CTILDRY 241
           +    + +   +     ++ + +L EK+ P   IN                    I DR+
Sbjct: 384 VHNMDSRMLRMNYMHCIELLNTVLEEKMAPTDDINTTNEKLLGKLVKERYGTDFFISDRF 443

Query: 242 PAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P+       +    D RFT  ++++    E+ +    + DP     R        K +  
Sbjct: 444 PSSARPFYTMECKDDARFTNSYDMFIRGEEISSGAQRIHDPDLLLAR-------AKMLNV 496

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  PI E ++           G  +G +R+VML  G  N+      P  
Sbjct: 497 DLTPIKE-YVDSFRLGAWPHGGFGVGLERVVMLYLGLGNVRLASLFPRD 544


>gi|124026937|ref|YP_001012257.1| aspartyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123977631|gb|ABM79912.1| Aspartyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 442

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 64/317 (20%), Positives = 102/317 (32%), Gaps = 36/317 (11%)

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +FVEN FIEI +  +  +   E     FS       +  KP +L  SP+   +  + AG 
Sbjct: 153 WFVENGFIEIFTPKIVGAA-TEGGAEVFSI-----VYFDKPAFLAQSPQLYKQMGVIAGL 206

Query: 95  EKIFCFAHAWRNG-EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS 153
           EK+F    A+R        H  E+T ++         + +    +I+          + S
Sbjct: 207 EKVFEIGPAFRAEPHHTTRHLTEYTSIDLEMGFIDSYEDVM---DIVEAVIRHVISSVLS 263

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
                   +         +   R                     Y   + AG  V   + 
Sbjct: 264 RYRSEIKEYFPNAITEPPKEIPRIT---------------IREAYKLLEAAGTPVEWGED 308

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD-PRFTKRFELYACNIELC 272
            S    R L E +E   G      +  YP        +  +D P +T  F+L    +E+ 
Sbjct: 309 LSSEAERKLGEIVEREYGSYLV-FVTEYPWAVRPFYTMRKSDEPDWTYSFDLLMRGLEIA 367

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVM 331
                         + E+      K  N      E +LA      P   G  +G +R+VM
Sbjct: 368 TGGQREHRYDVLVKQLEE------KGLNPRNF--EWYLAMFRYGAPPHGGAGIGLERVVM 419

Query: 332 LVTGANNINEVIWTPFS 348
            + G  NI E    P  
Sbjct: 420 QLLGLGNIREARMLPRD 436


>gi|149369632|ref|ZP_01889484.1| asparaginyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149357059|gb|EDM45614.1| asparaginyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 480

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/378 (15%), Positives = 121/378 (32%), Gaps = 46/378 (12%)

Query: 5   PSQPWWNR---DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R       +  R+ +  ++ +YF EN F  +++  +  S    
Sbjct: 109 PKRHTLEKLREQAHLRVRTNTFGAVMRLRSKLSFAVHQYFQENGFYYMNAPIITGSDAEG 168

Query: 56  ETHIRAFSTEL---------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
              +  F                     +D   K   L  S +   +        K++ F
Sbjct: 169 AGEM--FRVTSLPAKNAPLDDDGNVNFKEDFFEKETNLTVSGQLEAETYAMG-LGKVYTF 225

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A    +  M    + I+   + A            
Sbjct: 226 GPTFRAENSNTSRHLAEFWMIEPEIAFCDLDGNMDLAEDFIKYVVKYALDNCQDDLAFLE 285

Query: 160 NPFSEPEYITVAEAFAR--------YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
               + E        +         +   +    +   +  +        ++   +   +
Sbjct: 286 KRLLDEEKSKPQAERSEMALREKLSFIGENNFKRVSYTEAIEILRNCKPNKKKKFKYLIN 345

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
           +  +D+ S      +E +    C  IL  YPA   +       D +  +  ++    I  
Sbjct: 346 EWGADLQSEHERFLVEKH--FKCPVILFDYPADIKSFYMRLNDDGKTVRAMDVLFPGI-- 401

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
                E++   ++  R++  +++ +K+      +   +L          SG  +GF+RLV
Sbjct: 402 ----GEIVGGSQREERYDVLLEKMEKMGIPKEEL-YWYLDLRKFGTCVHSGFGLGFERLV 456

Query: 331 MLVTGANNINEVIWTPFS 348
             VTG  NI +VI  P +
Sbjct: 457 QFVTGMTNIRDVIPYPRT 474


>gi|115386114|ref|XP_001209598.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114190596|gb|EAU32296.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 559

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 100/318 (31%), Gaps = 24/318 (7%)

Query: 34  EYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
           EY +++    I +  L  +   E     F  +   ++      YL  SP+   +  +A  
Sbjct: 257 EYMIKSGSRWIFTPKLVGAA-TEGGSGVFEVKYFKRNG-----YLAQSPQLYKQMCIAGD 310

Query: 94  EEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
            E +F  A  +R  +     H  EF+ L++ +   ++   + +    +        ++ +
Sbjct: 311 MESVFEIAPVFRAEDSNTHRHLTEFSGLDFEKTFHAHYHEVLEFAENLLVFILTQLKERY 370

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
           + +                    +   ++    +    +    +   +  +     A + 
Sbjct: 371 ADKIAIIQKSYPKAGDFKLPKDGKALRLNYMDGVQMLKEAGVDVSEQERFENDFTTAMEK 430

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIEL 271
               I                   +LD++P           P DPRF+  ++ +    E+
Sbjct: 431 QLGQIIREKYD---------TDFYVLDKFPMAVRPFYTKACPQDPRFSNSYDFFMRGEEI 481

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLV 330
            +    + D  E       E   + K         ED+L       P  +G  +G +R+V
Sbjct: 482 MSGAQRINDIKEL------EASMRAKGVEPNQEGFEDYLNAFRQGCPPHAGGGLGLNRIV 535

Query: 331 MLVTGANNINEVIWTPFS 348
           M   G  N+      P  
Sbjct: 536 MFFLGLPNVRLATLFPRD 553


>gi|121710664|ref|XP_001272948.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus clavatus NRRL
           1]
 gi|119401098|gb|EAW11522.1| aspartyl-tRNA synthetase Dps1, putative [Aspergillus clavatus NRRL
           1]
          Length = 556

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 106/322 (32%), Gaps = 32/322 (9%)

Query: 34  EYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
           EY +++    I +  L  +   E     F  +     + +K  YL  SP+   +  +A  
Sbjct: 254 EYMIKSGSRWIFTPKLVGAA-TEGGSNVFEVK-----YFKKSGYLAQSPQLYKQMCIAGD 307

Query: 94  EEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
            E +F  A  +R  +     H  EF+ L++ +    +   + +    +        ++ +
Sbjct: 308 MENVFEIAPVFRAEDSNTHRHLTEFSGLDFEKTFRGHYHEVLEFAEDLLVFILTQLKERY 367

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
             +                      A            + +        ++AG+ V+  +
Sbjct: 368 QDKIAIIQKSYP------------KAGDFKLPKDGKALRLNYMDGVALLKEAGVDVSEQE 415

Query: 213 TWSDIF----SRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYAC 267
            + +       + L + I      +   +LD++P           P DP F+  ++ +  
Sbjct: 416 RFENDLTTAMEKQLGQIIRDKYDTD-FYVLDKFPMAVRPFYTKACPQDPNFSNSYDFFMR 474

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+ +    + D  E             K  +  +   ED+LA      P  +G  +G 
Sbjct: 475 GEEIMSGAQRINDIKELEE------SMIAKGLDPKHEGFEDYLAAFRQGCPPHAGGGLGL 528

Query: 327 DRLVMLVTGANNINEVIWTPFS 348
           +R+VM   G  N+      P  
Sbjct: 529 NRIVMFFLGLPNVRLASLFPRD 550


>gi|86131438|ref|ZP_01050036.1| asparagine-tRNA ligase [Dokdonia donghaensis MED134]
 gi|85817883|gb|EAQ39051.1| asparagine-tRNA ligase [Dokdonia donghaensis MED134]
          Length = 480

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 60/376 (15%), Positives = 109/376 (28%), Gaps = 44/376 (11%)

Query: 5   PSQPWWNR---DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R       +  R+ +  ++ EYF +N +    +  +  S    
Sbjct: 109 PKRHTLEKLREQAHLRVRTNTFGAIMRLRSKLSFAIHEYFNKNGYYHAHTPIITGSDAEG 168

Query: 56  ETHIRAFSTELIIQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
              +  F    +                 D   K   L  S +   +        KI+ F
Sbjct: 169 AGEM--FRVSALDPENPPRKEDGTIDYSKDFFGKETNLTVSGQLEGETYALG-LGKIYTF 225

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF------- 152
              +R        H  EF M+E   A    +  M    + I+     A +          
Sbjct: 226 GPTFRAENSNTSRHLAEFWMVEPEMAFCDLDGNMDLAEDFIKYVISYALENCQDDLAFLE 285

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
             Q          E   +      +  +D      +  +    L   +  +        +
Sbjct: 286 ERQTKEDQSKPAAERAAMPLREKLHFIVDNNFKRVSYTEAIDILRNSKPNKKKKFKYPIN 345

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
            W           +       C  IL  YPA   A       D +  +  ++    I   
Sbjct: 346 EWGADLQSEHERFLVEKH-FKCPVILFDYPANIKAFYMRLNEDGKTVRAMDVLFPGI--- 401

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
               E++   ++  R +   ++   +      +   +L          SG  +GF+RLV+
Sbjct: 402 ---GEMVGGSQREERLDVLKEKMAALDISEEEL-SWYLDTRKFGTCTHSGFGLGFERLVL 457

Query: 332 LVTGANNINEVIWTPF 347
            VTG  NI +VI  P 
Sbjct: 458 FVTGMTNIRDVIPYPR 473


>gi|209527681|ref|ZP_03276179.1| tRNA synthetase class II (D K and N) [Arthrospira maxima CS-328]
 gi|209491909|gb|EDZ92266.1| tRNA synthetase class II (D K and N) [Arthrospira maxima CS-328]
          Length = 325

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 64/168 (38%), Gaps = 17/168 (10%)

Query: 3   QIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
             P   +   + +   R R                R+ I  S+R Y     F EI++  L
Sbjct: 152 PFPDSYYGINDPELCRRHREIDLVSNPTSLQRFKLRSRIIRSIRTYLWNAGFDEIETPVL 211

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G     R F T     + +   LYL+ + E   K+ +  G EK+F     +RN   
Sbjct: 212 QTIYGGAA-ARPFITH---HNALDIDLYLRIATELFLKRAVCGGMEKVFEIGRVFRNEGI 267

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
              H PEFT +E Y+A+  Y Q+M    ++I   A       F  +  
Sbjct: 268 DSTHNPEFTSIEVYQAYADYFQIMALVEDLICAVATTGAVTPFQIKAW 315


>gi|213647401|ref|ZP_03377454.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 232

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 29/257 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
           YR H    +LM +  ++++   +                    E ++  +AF R+  ID 
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDC----------------QPAESLSYQQAFLRHLEID- 160

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 P   D+  L   A +  +    D  +    +   +    +EP++G    T +  
Sbjct: 161 ------PLSADKTQLREAAAKLDLSNIADTEEDRDTLLQLLFTMGVEPHIGKEKPTFIYH 214

Query: 241 YPAPESALANIYPADPR 257
           +PA +++LA I   D R
Sbjct: 215 FPASQASLAQISTEDHR 231


>gi|322805344|emb|CBZ02908.1| aspartyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 429

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 58/331 (17%), Positives = 114/331 (34%), Gaps = 39/331 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N I +  RE+  +  F EI +  + +            TE+    +  
Sbjct: 122 RHSKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVW--EGAEGG----TEVFKVKYFE 175

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQ 131
              YL  SP+F  + ++ AG E++F   HA+R  E     H  E+  ++      E  + 
Sbjct: 176 NTAYLAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKD 235

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +++   E  N++   + ++  +   + E                        +
Sbjct: 236 IMEVEERLLKFILEKLNKECKEYFDLLDSELPKIE----------------SEIPKITFK 279

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +L  +  +  +    D     +       K       +    L  YP  +  +  +
Sbjct: 280 EALDILIKEYNKNNLTCDLDPEGEKLI-----CKYAKEKLDSDFIFLTNYPREKRPMYTM 334

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P     T  F+L    IE+      + D          +  E K    + Y   E +L+
Sbjct: 335 -PLGKDGTHSFDLLFRGIEITTGGQRIHDYNMLV-----DNMEFKGFNPKDY---ESYLS 385

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                MP+  G+A+G +RL   + G  N+ E
Sbjct: 386 AFKYGMPKHGGLAIGLERLTSRLLGLENVRE 416


>gi|149190811|ref|ZP_01869076.1| asparaginyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148835373|gb|EDL52345.1| asparaginyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 466

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 59/355 (16%), Positives = 106/355 (29%), Gaps = 41/355 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          RN +  ++  ++ E  +  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWMSAPLITASDAEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ANLPLTEQGDVDFNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    +   K   ++++   +   ++            ++ E IT  E 
Sbjct: 244 LAEFWMVEPEVAFADLDDAAKLAEDMLKYVFKAVLEERRDDLEFFAQRINK-EAITRLEK 302

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F             +  Q D          +G        W    S      +      N
Sbjct: 303 FVE----------SDFAQVDYTDAIQILLDSGKEFEFPVEWGIDMSSEHERYLAEEH-FN 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              ++  YP    A       D +             L     E++   ++  R E  + 
Sbjct: 352 APVVVKNYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLELLDK 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  +   +  +      L         SG  +GF+RLV  VTG  NI +VI  P 
Sbjct: 406 RMVEMGIDPEHMSWYRDLR-RYGTVPHSGFGLGFERLVSYVTGMANIRDVIPFPR 459


>gi|288573299|ref|ZP_06391656.1| asparaginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569040|gb|EFC90597.1| asparaginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 434

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 110/349 (31%), Gaps = 42/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    R+R  +  R  I  S R++  +  F+ +DS  +        + +   
Sbjct: 118 LDNRHLWLRS--QRQRAIMTIRERIVWSWRQFLHDRDFLLVDSPIITGAIGEGASGL--- 172

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                  D+  +  YL  + +    +  AA   K++CF   +R  +     H  EF MLE
Sbjct: 173 ----FELDYFDQKAYLAQTGQLYA-EAAAAAYGKVYCFGPTFRAEKSKTRRHLTEFWMLE 227

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+  ++  M     ++    E   +       +     S  + +             
Sbjct: 228 PEVAYYDHKDNMDLQEALVSYTVEQVLEHCKEELALLERELSPLKSV------------- 274

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   + P   + Y  A +    +     + D         +      +    ++ Y
Sbjct: 275 -------LEGPFYRISYRDAVKKLNELGSSIEFGDDLGAEDETIL--TQQYDRPVFVECY 325

Query: 242 PA-PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P   ++      P D       +L            E++    QR     ++  + +   
Sbjct: 326 PKGAKAFYMKENPDDKETVLCADL-----LAPEGYGEIIGGS-QREDDLDKLTARMESDG 379

Query: 301 ETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +L          SG  +G +R +  + G ++I EVI  P +
Sbjct: 380 LDMDSYGWYLDLRRYGTFVHSGFGIGLERTIAWICGLHHIREVIPWPRT 428


>gi|239616616|ref|YP_002939938.1| asparaginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239505447|gb|ACR78934.1| asparaginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 432

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 114/348 (32%), Gaps = 46/348 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R+   L  R+ I  ++R+++ E  F+ ID+     S   E+    F 
Sbjct: 116 MDHRHLWLRSK--RQFHILHIRHEIIRAVRDFYNERGFVLIDTPIFTGSI-GESAGNCFE 172

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +           YL  + +    +       K++     +R  +     H  EF M E 
Sbjct: 173 IDYFDYG----KAYLAQTGQLYL-EAACMALGKVYNLGPTFRAEKSKTRRHLIEFWMNEA 227

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A+  +E  MK    ++    +   ++  +  +      S+ E I              
Sbjct: 228 EVAYYQHEDNMKLQEELVSYVVQKTIERAANHLHAIGRDISKLEKI-------------- 273

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                  + P   + Y  A +   +   +  W D         I      +   I++RYP
Sbjct: 274 -------EAPFPRITYTDAIKLLQKKGFNVNWGDDIGGDEETAIAEE--FDKPVIVERYP 324

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ---RHRFEKEMQEKKKI 298
               +      P +P      +     +       E++   E+   +    + ++E   +
Sbjct: 325 RKMKAFYMQPDPENPDVVLCDD-----MLAPEGYGEIIGASERIWDKELLIERIKEF-GL 378

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             E+Y     +L          SG  MG +R+V  + G  ++ E I  
Sbjct: 379 DVESY---SWYLDLREYGSVPHSGFGMGIERVVAWIAGLEHVREAIPF 423


>gi|21672623|ref|NP_660690.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25009351|sp|Q8K9I7|SYN_BUCAP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|21623256|gb|AAM67901.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 466

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 111/358 (31%), Gaps = 45/358 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTEL 66
            H R R  L       R+ I  SL ++  +  +  I +  +    + G     R  + ++
Sbjct: 125 AHLRSRTNLIGVIVRIRHHIFQSLHKFLNKQGYYWIPTPIITGLNTEGTGEMFRVSTMDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    +   K++ F   +R        H
Sbjct: 185 RNIPKKINGSVDFKKDFFGKESFLTVSGQLNLEAYACS-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   +  + ++++    ++++   +   +        +           +   
Sbjct: 244 LAEFWMLEIESSFCNLDEILIFSEDMLKYICKSLLKYCI----NDIKFLKNYIDNDIINR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ +++         + +          +  +  +  ++    +      +       
Sbjct: 300 LKKFLSVNFI-------RINYKDAIDILLNSKKKFDNVVSFGVDLNAEHERFLVEKHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
              ++  YP    A       D +     +L    I EL               R  +  
Sbjct: 353 PV-VIINYPKELKAFYMRLNDDKKTVAAMDLLVPGIGELIGGSQREERISVLDLRLSELG 411

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+         D  +   L        SG  MGF+RL+  +TG +NI ++I  P +
Sbjct: 412 LRKE---------DYWWYRDLRRYGTVHHSGFGMGFERLISYITGISNIRDIIPFPRT 460


>gi|255514185|gb|EET90447.1| aspartyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 430

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 96/342 (28%), Gaps = 46/342 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                       + +  +  E      F +I     +  +      +           + 
Sbjct: 128 RRLNTSAIFSIESTVLRAFTEGMYARGFSQIRPPGIVAEATEGGAELFPVQ-------YF 180

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
               YL  SP+   +  +  G +K+F    A+R  +     H  E T ++       +  
Sbjct: 181 EYKTYLAQSPQLYKQLAIIGGMDKVFMIVPAYRAEKSNDVYHLNESTQMDIEIGFADHND 240

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +      +    +    K             E   +           I   T  +  D 
Sbjct: 241 AIALLSETVTDIIKAVKSK-------------EKHALNQLNVDIEVPKIKTVTYEEAVDA 287

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALAN 250
                              +   + +F                  I+  YP    +  + 
Sbjct: 288 LKSEGKVQIEAGQDFTREAEVGIARLFG--------------DAVIVRDYPTAIRAFYSM 333

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +P  +  ++     IE+ +    +  P         E  +KK +  +++   E ++
Sbjct: 334 PNDENPNISNSYDFIYKGIEISSGAQRIHQPE-----LLIEAIKKKGMDPKSF---EFYI 385

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                  P  +G ++G +R+VM +TG++NI E    P  +  
Sbjct: 386 NAFRCGAPPHAGWSIGLERIVMKITGSSNIRECSLFPRDRKR 427


>gi|39939240|ref|NP_951006.1| asparaginyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|59798546|sp|Q6YPH3|SYN_ONYPE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|39722349|dbj|BAD04839.1| aspartyl/asparaginyl-tRNA synthetase [Onion yellows phytoplasma
           OY-M]
          Length = 506

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/369 (15%), Positives = 113/369 (30%), Gaps = 54/369 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST---- 64
           H R R          RN    +L  +F +  F  I++  +  +       +   +T    
Sbjct: 151 HLRVRTKLFGAVFRIRNTAFFALHSFFQKKGFFHINTPIITANDGEGAGELFQLTTLNLE 210

Query: 65  ----ELIIQDH-------------------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
                  I +                      K ++L  + +    + +A G  K++ F 
Sbjct: 211 ALPQTKNIPNASKLADETISKNEIDYQKDFFGKKVFLTATGQLEA-EAMALGLNKVYTFG 269

Query: 102 HAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
             +R  +     H  EF MLE   A  +  Q +K    +++          F        
Sbjct: 270 PTFRAEKSNTPRHAAEFWMLEPEMAFCNLSQNLKVAQEMLQ----------FVIAKCLEQ 319

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
            + + E++   E       +   +                 Q++  +  +   +    + 
Sbjct: 320 NYQDIEFLDKTEKNCLIEELKNISEEKEFLTVKYEQALEILQKSNTKFENPLFYGADLAT 379

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELL 279
              + +          I+  +P    A       D +     +L    + EL        
Sbjct: 380 EHEKYLTETHFKKPVFIV-DWPKEIKAFYMKNNPDQKTVAAMDLLVPRVGELIGGSQREE 438

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNI 339
           +        EK  Q K    +  + +D   L         SG  +GF+RL++ +TG +NI
Sbjct: 439 NLSVL---IEKMNQMKIPQKDLEWYLD---LRRFGGCI-HSGFGLGFERLLIFLTGLDNI 491

Query: 340 NEVIWTPFS 348
            +VI  P +
Sbjct: 492 RDVIAFPRT 500


>gi|167753186|ref|ZP_02425313.1| hypothetical protein ALIPUT_01457 [Alistipes putredinis DSM 17216]
 gi|167659500|gb|EDS03630.1| hypothetical protein ALIPUT_01457 [Alistipes putredinis DSM 17216]
          Length = 462

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 59/359 (16%), Positives = 112/359 (31%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            + R R          R+ +  ++ +YF +  F  + +  +  S           T L +
Sbjct: 121 AYLRPRTNTFGAIFRIRHAMAYAIHKYFNDKGFYYLHTPLITASDCEGAGAMFQVTTLDL 180

Query: 69  QD---------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            +            +  +     L  S +   +    +   +I+ F   +R        H
Sbjct: 181 NNLPKTEEGAVDYSQDFFGRPCSLTVSGQLEGELGALS-LGQIYTFGPTFRAENSNTPRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M+   + ++     A          +    ++     + E 
Sbjct: 240 LSEFWMIEPEMAFYELEDNMELAEDFLKYLIRYA----LENCREDLEFMNKMWDNGLIER 295

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
                N +         + D        + +G +      W  D+ S      +E +   
Sbjct: 296 LNFVLNHEF-------KRLDYTEGVEILKASGRKFEFPCDWGCDLQSEHERYLVEEH--F 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R  + 
Sbjct: 347 KRPVILINYPKQIKAFYMKQNEDGKTVRAMDVLFPKIGEIIGGSEREADYEKLSARVHEL 406

Query: 292 -MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            M EK+            +L          SG  +GF+RL++ VTG  NI +VI  P +
Sbjct: 407 GMNEKEL---------WWYLDTRRWGSAPHSGFGLGFERLLLFVTGMGNIRDVIPFPRT 456


>gi|126460722|ref|YP_001057000.1| aspartyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126250443|gb|ABO09534.1| aspartyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 428

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 63/363 (17%), Positives = 124/363 (34%), Gaps = 59/363 (16%)

Query: 3   QIPSQPWW---NRDFHYRRRPFLLKR----------NMIQSSLREYFVENQFIEIDSM-S 48
            +P   W    +     R R   LKR          + +  ++R    E +F+E+ +   
Sbjct: 104 PLPLDIWSESPDLATRLRWRSVDLKRPRNLAIFSFASDVLKAIRGVLYEEKFVEVFTPKI 163

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           +  S      +           +  +  YL  SP+   K+ L A  E++F    A+R  +
Sbjct: 164 IVTSTEGGAELFPVL-------YFERVAYLSQSPQLY-KEQLTASLERVFEIGPAYRAEK 215

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                H  EF  ++   A  +Y  +M     I+   AEVA                    
Sbjct: 216 HNTDFHLNEFISVDAEAAFMNYWDIMGLLEKIVHRLAEVAAS------------------ 257

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              A    R   I   + L+ P      + Y +A     ++ +  +W D  +  + + + 
Sbjct: 258 ---AAERLRAVGI---SPLELPRSKIPRVEYGEAVDKLRQMGYSVSWGDDLTVEMQKSLM 311

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
              G      +  +PA           +   ++ ++L    +E+ +    +        R
Sbjct: 312 KLYG--PVYFIVDFPAALRPFYT-KRKEGELSESYDLIINGLEIASGATRIH------RR 362

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E E + +++  +      E  L+     MP  +G  +GF+RLV  +   +N+      P
Sbjct: 363 DELEEEMRRRGLDPRLF--ESHLSVFDYGMPPHAGFGLGFNRLVTALLNLDNVRHATLYP 420

Query: 347 FSQ 349
             +
Sbjct: 421 RDR 423


>gi|166796902|gb|AAI59315.1| LOC100145238 protein [Xenopus (Silurana) tropicalis]
          Length = 478

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 99/349 (28%), Gaps = 36/349 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL-- 66
           H R R       L  R+   ++++E+F  N +  I +  +  +       +  F  E   
Sbjct: 143 HLRCRTPTFSSLLRIRSEATAAIQEFFKTNGYTHIHTPIITSNDCEGAGEL--FKVEAAN 200

Query: 67  ------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                         P +L  S +    ++++    ++F F   +R        H  EF M
Sbjct: 201 KSPAAGEESSFFGVPAFLTVSGQLHL-EVMSGAFSRVFTFGPTFRAENSQSRRHLAEFYM 259

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   +     + +   M  +                   + +  P    V +   +   
Sbjct: 260 VEAEISFTESLEDIMQVMESLFKTTTATLLARCPDDINFFSKYVSPGQKEVLDKLLKNTF 319

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           I +  T                ++A     +   W         + +  + G      + 
Sbjct: 320 IVMSYT----------EAINILKKAKCPFQYKPEWGCDLQTEHEKYLVKHCGEVPV-FVI 368

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            YP            D        +      L     EL     +  R +   Q   ++ 
Sbjct: 369 NYPLELKPFYARDNEDGPQQTAAAV----DLLVPGIGELFGGSLREERPQLLQQRLDRLG 424

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +     + +L           G  MGF+R +  + G  NI +VI  P 
Sbjct: 425 LKDTY--QWYLDLRQFGSVPHGGFGMGFERYLQCILGVENIKDVIPFPR 471


>gi|146413284|ref|XP_001482613.1| hypothetical protein PGUG_05633 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 481

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 110/360 (30%), Gaps = 36/360 (10%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--- 52
           +  +P+          R R       L  R+ ++   + +F +N  I++ +  +  S   
Sbjct: 140 LRTLPT---------LRHRTSSLASVLRLRSFLEGLFQRFFEQNDVIKVLAPLITSSDCE 190

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR-NGEQGC 111
              E  I              KP YL  S +    ++L+    +++     +R       
Sbjct: 191 GAGEQFIVEAKDSKPENPFFGKPAYLTVSTQLHL-EVLSQSLNRVWALTPCFRAEESHTN 249

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF MLE   ++      + D    +         +       N    S        
Sbjct: 250 RHLSEFWMLEAELSYIESVHQICDFTENMIRYV----TQDVVQSIANDLAQSRYNKDERQ 305

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
              A +  I            +   +  + +  G R+    TW D       + +     
Sbjct: 306 AMEANWKTILQSEPWPRITYTEAIEIINKIKNKG-RLKGRLTWGDSIQTEHEKWLAETHF 364

Query: 232 INCCTILDRYPAPESALANIYPADPRFT-KRFELYACNI-ELCNACDELLDPIEQRHRFE 289
            +    +  YP  +         +   T   F+L    I EL        +      +  
Sbjct: 365 KSPV-FITDYPKAQKPFYMPESENQNSTVACFDLIIPGIGELVGGSVREHNY----EKLL 419

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +E++ +     +     E +L+          G  MG +RLV  ++G  +I +VI  P +
Sbjct: 420 QELKNRNMSIEDN----EWYLSIRENGTVPHGGFGMGMERLVAFLSGMASIKDVIAFPRT 475


>gi|328478117|gb|EGF47979.1| lysyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 114

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             P DPRF +R        E  NA  EL DPI+QR R ++  Q K     E   ID+D++
Sbjct: 16  KNPKDPRFVERLNFVGGG-EYANAFTELNDPIDQRQRLKR-KQLKTAGNEEAQGIDDDYV 73

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             L   MP + G+ +G DRLVML+T A +I +V+  P  + 
Sbjct: 74  EALEYGMPPTGGLGIGIDRLVMLLTDAPSIRDVLLFPTLRP 114


>gi|224043707|ref|XP_002190256.1| PREDICTED: similar to asparaginyl-tRNA synthetase 2, mitochondrial
           (putative) [Taeniopygia guttata]
          Length = 473

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 94/351 (26%), Gaps = 34/351 (9%)

Query: 11  NRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
                 R       L  R+   + +  +F +N ++ I +  +  +       +    T  
Sbjct: 136 FPHLRCRNNTLGALLRIRSEATAGIHSFFQDNGYVHIHTPIITSNDCEGAGELFQIETSR 195

Query: 67  II------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                         P +L  S +    +++A     +F F   +R        H  EF M
Sbjct: 196 EAKESAENTHFFNVPAFLTVSGQLHL-EVMAGAFTHVFTFGPTFRAENSQSRRHLAEFYM 254

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   +     Q +   M  +                   + +  P      E   ++  
Sbjct: 255 VEAELSFTENLQDIMQVMEDLFKTVTSTVLSKCPRDVELFHKYIAPAQKGRLEQILKHKF 314

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +                     +QA         W         + +  + G     ++ 
Sbjct: 315 M----------IISYSEAVEILKQAPQTFTFKPEWGCDLQTEHEKYLVKHCGEVPVFVV- 363

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR--FEKEMQEKKK 297
            YP            D        +      L     EL     +  R  F +   ++  
Sbjct: 364 NYPYDLKPFYMRDNEDGPEHTVAAV----DLLVPGVGELCGGSLREERLPFLESRLQRLG 419

Query: 298 I-YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +     + +D   L          G  MGF+R +  + G +NI +VI  P 
Sbjct: 420 LTDAYQWYLD---LRKF-GSVPHGGFGMGFERYLQYILGVDNIKDVIPFPR 466


>gi|325281305|ref|YP_004253847.1| Asparaginyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313114|gb|ADY33667.1| Asparaginyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 487

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 59/376 (15%), Positives = 109/376 (28%), Gaps = 43/376 (11%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---P 53
           P +    +     H R R          R+ +  ++ +YF ++ F  + +  +  S    
Sbjct: 117 PKKHSLEFLRDHAHLRFRTNMFGAIFRIRHAMAFAIHQYFDQHGFFYLHTPLITASDCEG 176

Query: 54  GNE----THIRAFSTELIIQDHIR--KPLY-----LQTSPEFSCKKLLAAGEEKIFCFAH 102
             E    T +   +  L  +  +   +  +     L  S +    +L A    KI+ F  
Sbjct: 177 AGEMFRVTTLDPKNPPLTEEGEVDFRQDFFGKATNLTVSGQL-EGELGAMALGKIYTFGP 235

Query: 103 AWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-------F 154
            +R        H  EF M+E   A    +  M    + ++     A              
Sbjct: 236 TFRAENSNTTRHLSEFWMIEPEAAFYDLDDNMDLAEDFLKYLIRYALDNCMDDLKFLSAR 295

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
           Q          E          +        +   +  +        +    +   D   
Sbjct: 296 QQEEEKNKKAEERSMELIEKLNFVLTHSFERVTYTEAIEILKNSKPNKNGKFQYPVDGWG 355

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCN 273
            D+ S      +E +       IL  YP    +      P          L+    E+  
Sbjct: 356 VDLQSEHERYLVEKH--FKKPVILTGYPKEIKAFYMKQNPDGKTVAAMDVLFPQIGEIIG 413

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
                 +  +   R  +       I  E+      +L          SG  +GF+RL++ 
Sbjct: 414 GSQREENYDKLVARMNE-----VGISEESMSY---YLDTRRFGSAVHSGFGLGFERLLLF 465

Query: 333 VTGANNINEVIWTPFS 348
           VTG  NI +VI  P +
Sbjct: 466 VTGMGNIRDVIPFPRT 481


>gi|15026660|gb|AAK81488.1|AE007853_3 Aspartyl/asparaginyl-tRNA synthetase [Clostridium acetobutylicum
           ATCC 824]
          Length = 479

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 53/335 (15%), Positives = 110/335 (32%), Gaps = 40/335 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            + R          I     E+ V+N F EI +  +              TEL    +  
Sbjct: 173 RNSRVNSVFKIETEIAHGFSEFLVKNGFTEIYTPKIVS--EGAEGG----TELFKLKYFD 226

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++AAG E++F   H +R        H  E+  ++           
Sbjct: 227 KEAYLAQSPQFYKQMMVAAGYERVFEIGHVYRAESHDTKRHLNEYISMDLEMGFINDEMD 286

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L++  + +++   +   QK                             +++ T  + P  
Sbjct: 287 LIRFEIELLKYIFQNVRQKCSKS--------------------IELLKVEIPTIQEVPIM 326

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
           P  +      ++   +             ++   ++     +    L  Y   +  +  +
Sbjct: 327 P-LNEAITILREVYNKKELTTDIDHEGEELIGRFVKEKYNSD-FVFLTHYSKDKRPMYTM 384

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P     T  F+L    +E+      + D    R     +    K +  E++   + +L 
Sbjct: 385 -PCGKNLTHSFDLIFRGMEITTGGQRINDYDMLR-----QSMLDKGLKVESF---KSYLD 435

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                MP   G+A+G +R+ + +   +NI E  + 
Sbjct: 436 VFKFGMPPHGGLAIGLERITIKLLNLDNIREAAFF 470


>gi|203284026|ref|YP_002221766.1| asparaginyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201083469|gb|ACH93060.1| asparaginyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 461

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/355 (16%), Positives = 105/355 (29%), Gaps = 39/355 (10%)

Query: 12  RDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL-- 66
                R   F      +N I   + EYF +N F  I +  +  +   E     F      
Sbjct: 122 PHLRIRTNTFGAVARIKNQISYKIHEYFQKNGFFYIHTPIITSND-GEGVGEIFRVSTLN 180

Query: 67  -----------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                         D   K  +L  + +   +    A   KI+ F   +R        H 
Sbjct: 181 LNNIENKKEIDFKDDFFGKQAFLTVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRHA 239

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A  + E  +    + ++        +  +  + +   F       V    
Sbjct: 240 SEFWMIEPEMAFFTLEDNINLAEDFLKY----VLSETLNHCHEDMEFFDNFIEKGVI--- 292

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            +  ++                L    +   I+      W           +   + I  
Sbjct: 293 KKIEDVINSKFEVITYTQAIKKLENATKTFEIK----PYWGMDLQTEHERYLTEEI-IKK 347

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE-QRHRFEKEMQ 293
            T +  YP    A       D +  K  ++    I       E  D ++   +R ++   
Sbjct: 348 PTTVIDYPKEFKAFYMKMNQDNKTVKGMDILVPRIGEIIGGSEREDNLDKLNNRIKELNL 407

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E + +    + +D   L         SG  +G +RL+   TG  NI +VI  P +
Sbjct: 408 ETETLN---WYLD---LRRF-GSTPHSGFGLGLERLLQYTTGMANIRDVIPFPRT 455


>gi|298712823|emb|CBJ48788.1| Asparaginyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 478

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 103/359 (28%), Gaps = 75/359 (20%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE--------- 56
            H R R          R+ +  +  ++F E  F+ + S  +  S      E         
Sbjct: 163 AHLRPRTNTIAAVARVRSALAQATHDFFREEGFLYLQSPIITASDCEGAGEMFRVTTLPS 222

Query: 57  -----THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
                  +   ST+   QD   KP +L  S + S +    A    ++ F   +R      
Sbjct: 223 EVSKVPTLEDGSTDY-SQDFFGKPAFLTVSGQLSGETHACA-LGDVYTFGPTFRAENSQT 280

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF M+E   +       M +    ++     A                       
Sbjct: 281 TRHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVSHA----------------------- 317

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                     DL       D+     L     +  +R  H+   ++              
Sbjct: 318 ----MEVCGSDLEFFNKFYDKELLQRLQRIKDKPFVRTEHERWLAE-------------T 360

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
             +    +  YP    A       D +     +L    +       EL+   ++  R E+
Sbjct: 361 RYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMDLLVPGV------GELIGGSQREERLEQ 414

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +  +      P D  +   L        +G  +GF+RLV  VTG  NI + I  P 
Sbjct: 415 LEAKMVEFNLS--PEDYWWYNDLRRYGSVPHAGYGLGFERLVCYVTGVENIRDAIAFPR 471


>gi|163800697|ref|ZP_02194597.1| asparaginyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159175046|gb|EDP59843.1| asparaginyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 466

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTEEGKVDYNEDFFGKETFLTVSGQLNGEAYACA-LSKVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E + K   ++++   +    +             + E IT  
Sbjct: 242 RHLAEFWMVEPEVAFADLEDIAKLSEDMLKFVFKAVLAECRDDLEFFAQRIDK-EAITRL 300

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D          +G        W    S      +     
Sbjct: 301 EQF----------VSSDFAQVDYTDAIQILIDSGREFEFPVEWGIDMSSEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRANDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DERMREVGIDPEHMNWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|227892517|ref|ZP_04010322.1| asparaginyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227865638|gb|EEJ73059.1| asparaginyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 432

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 103/350 (29%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDHRHLWLRSK--KPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVEYFDHDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +   +K                     +   +    D
Sbjct: 226 PEMAWMHQDESLDLQERYLAYMTKQVLEKN--------------------QYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFTRLPYDDAVKMLQDAGRDFKWGDDFGAPDEGYISEQY--DRPVSIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P            D                     E+    E+   +E  K+  E   + 
Sbjct: 324 PTSIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEILKQQIEDAGLN 379

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  MGF+R +  +   ++I E I  P  
Sbjct: 380 LEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWICHLDHIREAIPFPRL 426


>gi|329898899|ref|ZP_08272497.1| Asparaginyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328920707|gb|EGG28179.1| Asparaginyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 468

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 108/358 (30%), Gaps = 45/358 (12%)

Query: 13  DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R          R  + +++ ++F ++ F  I++  +  S       +   ST  
Sbjct: 128 QAHLRPRTNTFGAITRVRTTLANAIHQFFFDHGFHWINTPIITGSDCEGAGELFRVSTLD 187

Query: 67  -------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-L 112
                          QD   +  +L  S +   +    A   K++ F   +R        
Sbjct: 188 MVNTPKNAQGQVDYKQDFFEQEAFLTVSGQLEVESYCLAMS-KVYTFGPTFRAENSNTSR 246

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A  +          +++        ++ + +  +   F++    TV E
Sbjct: 247 HLAEFWMIEPEVAFANLADNADLAEALLKH----VFTRVMNEREDDMAFFNQRIDTTVLE 302

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                            ++ D        +  G +     +W    +      +     +
Sbjct: 303 RLT-------NVIEQPFERIDYTDAINILENCGQKFEFPVSWGIDMASEHERYLAEKH-V 354

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               ++  YP    A       D +             L     E++   ++  R +   
Sbjct: 355 GRPVVVMNYPKDIKAFYMRLNDDEKTVAAM------DVLAPGIGEIIGGSQREERLD--- 405

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  +ET      +   L        +G  +GF+RL+  +TG  N+ + I  P +
Sbjct: 406 -VLDSRMDETMREHLWWYRDLRRYGTVPHAGFGLGFERLLNYITGMENVRDAIPFPRT 462


>gi|168182869|ref|ZP_02617533.1| aspartate--tRNA ligase [Clostridium botulinum Bf]
 gi|237794310|ref|YP_002861862.1| aspartyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182673947|gb|EDT85908.1| aspartate--tRNA ligase [Clostridium botulinum Bf]
 gi|229263481|gb|ACQ54514.1| aspartate--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 429

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 58/331 (17%), Positives = 113/331 (34%), Gaps = 39/331 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N I +  RE+  +  F EI +  + +            TE+    +  
Sbjct: 122 RHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVW--EGAEGG----TEVFKVKYFE 175

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQ 131
              YL  SP+F  + ++ AG EK+F   HA+R  E     H  E+  ++      E  + 
Sbjct: 176 NTAYLAQSPQFYKQMMVGAGFEKVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKD 235

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +++   E  N++   +  +  +   + E                        +
Sbjct: 236 IMEVEERLLKFILEKLNKECKEYFALLDSELPKIE----------------TEIPKITFK 279

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +L  +  +  +    D     +       K       +    L  YP  +  +  +
Sbjct: 280 EALDILSKEYNKNNLTCDLDPEGEKLI-----CKYAKKKLNSDFIFLTNYPREKRPMYTM 334

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P     T  F+L    IE+      + D          +  + K    + Y   E +L+
Sbjct: 335 -PLGKDGTHSFDLLFRGIEITTGGQRIHDYSML-----IDNMKFKGFNPKDY---ESYLS 385

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                MP+  G+A+G +RL   + G  N+ E
Sbjct: 386 VFKYGMPKHGGLAIGLERLTARLLGLENVRE 416


>gi|260776072|ref|ZP_05884967.1| asparaginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607295|gb|EEX33560.1| asparaginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 492

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +   ST  +
Sbjct: 151 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDM 210

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 211 ENLPRTEEGKVDYNEDFFGKETFLTVSGQLNGEAYACA-LSKVYTFGPTFRAENSNTSRH 269

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E + K   ++++   +   ++             + E IT  E 
Sbjct: 270 LAEFWMVEPEVAFADLEDIAKLSEDMLKYVFKAVLEERRDDLEFFAQRIDK-EAITRLEK 328

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F             +  Q D          +G        W    S      +       
Sbjct: 329 FVE----------SDFAQVDYTDAIQILLDSGRDFEFPVEWGIDMSSEHERYLAEEHFKA 378

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 379 PVIVK-NYPKDIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 431

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +    +  +    D+   L        SG  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 432 RMRDIGIDPEHM---DWYRDLRRYGTVPHSGFGLGFERLVSYVTGMGNVRDVIPFPRT 486


>gi|197335346|ref|YP_002155960.1| asparaginyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|197316836|gb|ACH66283.1| asparaginyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 466

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWMSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGC 111
                            D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DHANLPLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSHTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A  + + + K   ++++   E    +         +   + + IT  
Sbjct: 242 RHLAEFWMVEPEVAFATLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDK-QAITRL 300

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D        + +G     D  W    S      +     
Sbjct: 301 EQF----------VSSDFAQVDYTDAIQILKDSGRDFEFDVEWGIDMSSEHERYLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRQNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +  +   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DARMIEMGIDPEHMSWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|161723224|ref|NP_350148.2| aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
          Length = 425

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/335 (15%), Positives = 110/335 (32%), Gaps = 40/335 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            + R          I     E+ V+N F EI +  +              TEL    +  
Sbjct: 119 RNSRVNSVFKIETEIAHGFSEFLVKNGFTEIYTPKIVS--EGAEGG----TELFKLKYFD 172

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++AAG E++F   H +R        H  E+  ++           
Sbjct: 173 KEAYLAQSPQFYKQMMVAAGYERVFEIGHVYRAESHDTKRHLNEYISMDLEMGFINDEMD 232

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L++  + +++   +   QK                             +++ T  + P  
Sbjct: 233 LIRFEIELLKYIFQNVRQKCSKS--------------------IELLKVEIPTIQEVPIM 272

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
           P  +      ++   +             ++   ++     +    L  Y   +  +  +
Sbjct: 273 P-LNEAITILREVYNKKELTTDIDHEGEELIGRFVKEKYNSD-FVFLTHYSKDKRPMYTM 330

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P     T  F+L    +E+      + D    R     +    K +  E++   + +L 
Sbjct: 331 -PCGKNLTHSFDLIFRGMEITTGGQRINDYDMLR-----QSMLDKGLKVESF---KSYLD 381

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                MP   G+A+G +R+ + +   +NI E  + 
Sbjct: 382 VFKFGMPPHGGLAIGLERITIKLLNLDNIREAAFF 416


>gi|59711766|ref|YP_204542.1| asparaginyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|75354119|sp|Q5E5P2|SYN_VIBF1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|59479867|gb|AAW85654.1| asparaginyl tRNA synthetase [Vibrio fischeri ES114]
          Length = 466

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWMSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGC 111
                            D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DHANLPLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSHTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A  + + + K   ++++   E    +         +   + + IT  
Sbjct: 242 RHLAEFWMVEPEVAFATLDDVAKLAEDMLKYVFEAVLAERRDDLEFFASRIDK-QAITRL 300

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D        + +G     D  W    S      +     
Sbjct: 301 EQF----------VSSDFAQVDYTDAIQILKDSGRDFEFDVEWGIDMSSEHERYLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRQNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +  +   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DARMIEMGIDPEHMSWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|27365578|ref|NP_761106.1| asparaginyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|37680274|ref|NP_934883.1| asparaginyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|320155974|ref|YP_004188353.1| asparaginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|31340441|sp|Q8DAF0|SYN_VIBVU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|59798575|sp|Q7MJS0|SYN_VIBVY RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|27361726|gb|AAO10633.1| asparaginyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|37199021|dbj|BAC94854.1| asparaginyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|319931286|gb|ADV86150.1| asparaginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 466

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 104/356 (29%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------- 58
            H R R          R+ +  ++  ++ E  +  + +  +  S      E         
Sbjct: 125 AHLRPRTNVIGAVARVRHSLSQAIHRFYHEQGYYWLSAPLITASDCEGAGEMFRVSTLDL 184

Query: 59  IRAFSTELII----QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                TE       +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ANLPRTESGDVDFNEDFFGKETFLTVSGQLNGEAYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      + K   ++++       ++    +  +   F+      V   
Sbjct: 244 LAEFWMVEPEVAFADLNDIAKLAEDMLKYVFAAVLEE----RRDDLEFFASRIDKDVINR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ + D           D          +G        W    S      +       
Sbjct: 300 LEQFVSSDFAQV-------DYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDA 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 406 RMVEMGIDPEHMNWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|322433972|ref|YP_004216184.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321161699|gb|ADW67404.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 444

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/346 (18%), Positives = 114/346 (32%), Gaps = 40/346 (11%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
            +  W R    R+   L  R  I  +  +YF +N F+  D   L        +    ++E
Sbjct: 124 HRHLWIRT--PRQSAILRVRATIMRAAAQYFDDNGFVRTDPPILTP------NACEGTSE 175

Query: 66  LIIQDHIRKP-LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           L   D+      YL  S +   +    A   K++ F   +R  +     H  EF M+E  
Sbjct: 176 LFEMDYFDDDKAYLTQSGQLYIEATALA-LGKVYSFGPTFRAEKSKTRRHLTEFWMVEPE 234

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A  + + L+    N +        +K  +   V     S+ E I               
Sbjct: 235 LAFATLDDLLVLAENYLSFIVAAVLEKHQADLKVIGKDVSKLETI--------------K 280

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                    D H + ++A   G+ V       D F       I  +   +   ++ RYP+
Sbjct: 281 APFPRLSYDDAHKMLVEAHAKGL-VETLHKDGDDFGSPDETYI--SNQFDRPVMVHRYPS 337

Query: 244 PE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
              +      P DP      ++            E++       R +     K +I +  
Sbjct: 338 AMKAFYMQPDPEDPTKALCVDV-----LAPEGYGEIIGGS---QRVDDYDLLKSRIEHHG 389

Query: 303 YPID--EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            P+D  + +L           G  MG +R+V  + G +++ E I  
Sbjct: 390 LPLDAFQWYLDLRKYGSVPHGGFGMGIERVVAWICGLDHVRETIPF 435


>gi|300173468|ref|YP_003772634.1| asparaginyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887847|emb|CBL91815.1| Asparaginyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 435

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 107/348 (30%), Gaps = 44/348 (12%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +    H +    L  RN + ++  E+F    F ++DS  L   +P         +T
Sbjct: 121 ERHLYL--RHLKPFATLKIRNTLIAATYEFFNNEGFTKLDSPLLTGSAPEG-------TT 171

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           +L   D+  +  +L  + +   +    A   K+F F   +R  +     H  EF M+E  
Sbjct: 172 DLFETDYFGESAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIEPE 230

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A    E+ +      I        +K                     E        D  
Sbjct: 231 MAFMHQEESLVIQERYISFLISKVLEKN--------------------EQELDILKRDKD 270

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                 + P   + Y  A +       D  W   F       +  +        +  +P 
Sbjct: 271 LLQSYTELPYPRVSYDDAIKLLQENGFDVEWGVDFGSPEETFLANHFA--KPVFIVNFPK 328

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
              A           T+   + + ++       E++       R       K++I  E  
Sbjct: 329 AIKAFYMKR----HATREDVVVSADLLAPEGYGEIIGGS---ERDTDYDYLKQRIEEEGL 381

Query: 304 PIDE--DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++E   +L          +G  +G +RLV  VTG  +I E I  P  
Sbjct: 382 SLEEYGWYLDLRQYGSVPHAGFGLGLERLVTFVTGEEHIREAIPFPRM 429


>gi|118431776|ref|NP_148450.2| aspartyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|6919973|sp|Q9Y9U7|SYD_AERPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116063098|dbj|BAA81203.2| aspartyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 442

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 112/350 (32%), Gaps = 37/350 (10%)

Query: 4   IPSQ--PWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
           +P++    W    +           M+    R+Y+    F+EI +  +  + G E+    
Sbjct: 119 LPTRLKYRWLDIRNPMVSAIFELEAMVAKVFRDYYWSQGFVEIFTPKIV-AAGTESGAEV 177

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTML 120
           F        +  K  +L  SP+F  +  + AG E++F     +R        H  E+  L
Sbjct: 178 FPV-----VYFDKTAFLAQSPQFYKQFAVIAGLERVFEIGPVFRAEPHHTSRHLNEYHSL 232

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +           + + +     A     ++    + V      E   I            
Sbjct: 233 DIEVGFIESYNDVMNYVEGFMRAIVRMLEE--DGRRVLELYGVELPRI------------ 278

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                   P  P R    +  ++ G +V + +       R++       L  +    +  
Sbjct: 279 ---PASGIPKIPLRKAYEILEEKYGKKVEYGEDLDSEGERLMGAYAGEELDSD-FVFIVE 334

Query: 241 YPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YP             +P +T  F+L    +E+            + HR  + +++K  + 
Sbjct: 335 YPWKVRPFYTMRKDDEPSWTYSFDLLYRGLEIVTGGQREH----RYHRLLENLRDK-GLD 389

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E++     +L       P   G  MG +R+VM      NI E    P  
Sbjct: 390 AESFQ---FYLDFFKHGAPPHGGAGMGLERIVMQTLKLENIREARMLPRD 436


>gi|308483892|ref|XP_003104147.1| CRE-NARS-2 protein [Caenorhabditis remanei]
 gi|308258455|gb|EFP02408.1| CRE-NARS-2 protein [Caenorhabditis remanei]
          Length = 444

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 112/358 (31%), Gaps = 43/358 (12%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFS 63
            +  H R R      FL  R+ +     E+F+   FI ID+  L  +   G        +
Sbjct: 102 RKKTHLRARNSQFASFLRARSALFRETHEFFMSRDFIHIDTPKLTRNDCEGGGEVFDVVT 161

Query: 64  TELIIQDHIRK----PLYLQTSPEFSCKKL----LAAGEEKIFCFAHAWRNG-EQGCLHQ 114
           T     +         +YL  S +   + +    L    ++++    A+R   +Q   H 
Sbjct: 162 TSAESLNGSEGIKEDAMYLSVSSQLHLEAMVRYELINRLQRVYTLGPAFRAEKQQSHAHL 221

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV--ANQKIFSFQNVNCNPFSEPEYITVAE 172
            EF MLE   A             II     +      + S+     +    P+  T  E
Sbjct: 222 SEFYMLEVEVAFVDVILFSLFSTIIILYFQNIEEMCSLVESYVQNMFSFLHSPKLRTELE 281

Query: 173 -AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
              +++       +  +    +  +  L +  + +      +  +    +          
Sbjct: 282 IMNSQHLASIPLNSPFSRITYEDAVKVLTSDGSNVSAKSGLSKKNELDLV-------KFH 334

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
            N    +  YP  +         D   T  F+L    + EL        D          
Sbjct: 335 DNQPVFVTHYPKNQKPFYMARTQDDTKTLSFDLLVPGVGELAGGSVREPDAE-------- 386

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + K++         E +L       P ++G  +GF+RL+  + G  NI + +  P 
Sbjct: 387 --KLKERGCGI-----EWYLETRKRGQPPTAGFGIGFERLLQYLLGIQNIKDTLAFPR 437


>gi|94971623|ref|YP_593671.1| asparaginyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|122986019|sp|Q1IHQ3|SYN_ACIBL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94553673|gb|ABF43597.1| asparaginyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 442

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/343 (16%), Positives = 102/343 (29%), Gaps = 35/343 (10%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAFST 64
            +  W R    R+   L  R  I  S  E+F +  F   +   L  +     + +     
Sbjct: 123 HRHLWVRS--QRQAAILRIRGEIVRSAHEFFDKQGFTLTEPPILTPAACEGTSTLFPV-- 178

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
                D+   P +L  S +    +  A    K++ F   +R  +     H  EF M+E  
Sbjct: 179 -----DYFGDPAFLTQSGQLYI-EATAMALGKVYSFGPTFRAEKSKTRRHLTEFWMVEPE 232

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A    + +MK   + I    +                  E     +       + ++  
Sbjct: 233 VAFAELDDIMKLAEDFITHIVKSVL---------------ERRRDDLKTIERDLSKLENI 277

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
            T       D  +  LQ   A   +     W           I      +   ++ RYP 
Sbjct: 278 DTPFPRISYDEAVQMLQEGHAKGELESRFEWGGDLGSPDETYISSK--FDRPVMIHRYPV 335

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
              A       DP  +K        +       E++   ++   +EK +    +      
Sbjct: 336 EVKAFYM--EPDPNNSKVALCVD--VLAPEGYGEVIGGSQRMGSYEKLLARIHEHQLPEE 391

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
              + +L          SG  MG +R V  + G +++ E I  
Sbjct: 392 SF-KWYLDLRKFGGVPHSGFGMGIERAVAWICGLDHVRETIPF 433


>gi|329940507|ref|ZP_08289788.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329300568|gb|EGG44465.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 440

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/340 (17%), Positives = 106/340 (31%), Gaps = 41/340 (12%)

Query: 9   WWNRDFHYRRRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFST 64
           W   D   RRRP        +  ++  +REY       E+ +  L  +  +E+    F  
Sbjct: 122 WRFLDV--RRRPAAQLMFAVQTTLEQGMREYAYAQGATEMHTPKLMGTA-SESGAEVFE- 177

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
                 +  +  YL  SP+F  +  ++AG EK+F     +R        H  EFT ++  
Sbjct: 178 ----LGYFDRSAYLAQSPQFYKQMAISAGIEKVFEIGPVFRAEPSFTSRHATEFTGVDVE 233

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A     + +      +   A                           EA      +++ 
Sbjct: 234 LAWIDGVEDVMAFEEQMLAHAIAKVAGA------------------HREAVREQFGVEIT 275

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                  +      +   ++ G          D      I         +    + +YP 
Sbjct: 276 VPATPFPRITMAKAHDILRKGGWDSQGTKEDLDPEGERSISAHIQQATGHEFVFITQYPV 335

Query: 244 PESALANIYPAD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                 ++ PAD P  T  F+L    +E+                  K+  EK  +  E 
Sbjct: 336 GIRPFYHMRPADNPSVTLSFDLLWKGLEITTGAQREHRYDV----LMKQAAEK-GMSPEP 390

Query: 303 YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                D+L       P   G+ MG  R++M++ G  +I E
Sbjct: 391 MQ---DYLNAFRYGCPPHGGLGMGLGRVLMVLLGLESIRE 427


>gi|315427092|dbj|BAJ48708.1| asparaginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315427123|dbj|BAJ48738.1| asparaginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 429

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/349 (14%), Positives = 103/349 (29%), Gaps = 46/349 (13%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           S          +    L  R+ +  S+R +F    F+E+   +   +   E     F   
Sbjct: 115 SDHRHLAIRSPKAAAILRFRSNLLKSIRNWFEREGFVEVHCPTFITAAV-EGGATLFEV- 172

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
               ++  K +YL  S +F  +  + +   K++    ++R        H  EF  +E   
Sbjct: 173 ----NYFGKKVYLTQSVQFYQEAAIYS-LGKVYSIQPSFRAERSKTRRHLTEFWHVEGEM 227

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A       +   +  +   A     +              PE +       +Y+      
Sbjct: 228 AFA-GLDDLMKVVERLVGEASAETLENSRDVLKLLGRERSPESVEPPYHRVKYS------ 280

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA- 243
                               G+++           +IL       +  +    L  +P  
Sbjct: 281 -----------EALDILASKGVQLEWGSDLGADEEKIL------TMEFDKPFFLTHFPKK 323

Query: 244 PESALANIYPADPRFTKRFELYA---CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
            ++      PA+P  T   +L A       + +    + D  +   R  +E         
Sbjct: 324 AKAFYHMPDPANPELTLSADLLAPEGYGEIVGSG-QRIHDYQQLLTRIVEE-------GL 375

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E     + +L          SG  +G +RLV  + G  NI   +  P +
Sbjct: 376 EPSDY-KWYLDLRKYGSVPHSGFGLGVERLVQWLLGLKNIRSAVMFPRT 423


>gi|320450617|ref|YP_004202713.1| asparaginyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150786|gb|ADW22164.1| asparaginyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 438

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/348 (15%), Positives = 107/348 (30%), Gaps = 33/348 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R    +  R+ ++ ++ ++F E  F+  D+  L  S    T    F 
Sbjct: 115 MDHRHLWLRHR--RPFAVMRIRDELERAIHDFFAERGFLRFDAPILTPSAVEGTT-DLFE 171

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +L       +  YL  S +   +    A   K++ F   +R        H  EF M+E 
Sbjct: 172 VDLFD----GEKAYLSQSGQLYAEAGALA-FGKVYTFGPTFRAERSKTRRHLLEFWMIEP 226

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A  ++E+ M     ++                           + + E          
Sbjct: 227 EVAFMTHEENMALQEELVSHLVGRVLT-------------RRARELEMLERDPTALEPAA 273

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                     +   L  +  +  + V     + + F       +  +   +    ++RYP
Sbjct: 274 EGNYPRLTYREAVALVNRLAEKDLEV-PPLPYGEDFGAPHEAAL--SRQFDRPVFIERYP 330

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P DP      +L            E++   ++ H  E   ++ ++    
Sbjct: 331 ARIKAFYMEPDPEDPELVLNDDL-----LAPEGYGEIIGGSQRIHDLELLRRKIQEFGLP 385

Query: 302 TYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D    L         SG  +G +R V  + G  ++ E I  P  
Sbjct: 386 EEVYDWYLDLRRF-GSVPHSGFGLGLERTVAWICGLAHVREAIPFPRM 432


>gi|28898667|ref|NP_798272.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839735|ref|ZP_01992402.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260364898|ref|ZP_05777469.1| asparagine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260879702|ref|ZP_05892057.1| asparagine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260898825|ref|ZP_05907266.1| asparagine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260900795|ref|ZP_05909190.1| asparagine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|31340435|sp|Q87NH5|SYN_VIBPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|28806885|dbj|BAC60156.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746747|gb|EDM57735.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308086657|gb|EFO36352.1| asparagine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093426|gb|EFO43121.1| asparagine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308106846|gb|EFO44386.1| asparagine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308111577|gb|EFO49117.1| asparagine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328474766|gb|EGF45571.1| asparaginyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 466

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTDAGKVDYNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    + + K   ++++   +   ++    +  +   F++       
Sbjct: 242 RHLAEFWMVEPEVAFAELDDVAKLAEDMLKYVFKAVLEE----RRDDLEFFAQRIDKQAI 297

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++ + D           D          +G        W    S      +     
Sbjct: 298 TRLEQFVSSDFAQV-------DYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DARMREMGIDPEHMSWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|328466022|gb|EGF37199.1| asparaginyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 432

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/350 (17%), Positives = 101/350 (28%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  +N +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDHRHLWLRSK--KPFAIMQIKNTMFKATVDFFEKEDFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   D+     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVDYFDHDAYLSQSGQLY-GEAGAMAFGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +    K                     E   +    D
Sbjct: 226 PEMAWMHQDESLDLQERYLAYMVKQVLDKN--------------------EYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFVRLPYDDAVKMLQDAGRDFKWGDDFGAPDEGYISEQY--DRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P            D                     E+    E+   +E  K+      + 
Sbjct: 324 PTSIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEVLKQQIIDAGLN 379

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  MGF+R +  V   ++I E I  P  
Sbjct: 380 LEDYQ---WYLDLRKFGGVPHSGFGMGFERTIAWVCHLDHIREAIPFPRL 426


>gi|312879332|ref|ZP_07739132.1| asparaginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310782623|gb|EFQ23021.1| asparaginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 434

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 113/351 (32%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R   +R++  L  R+ +  S R Y  +  F+ +DS  L          +   
Sbjct: 118 LDNRHLWLRS--HRQQAILKIRDRVILSCRTYLHDRGFLLVDSPILTGSIGEGADGL--- 172

Query: 63  STELIIQDHIRK-PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
                  D+  +   YL  + +   +   AA   +++CF   +R  +     H  EF M+
Sbjct: 173 ----FELDYFDQGKAYLAQTGQLYLEAA-AAAYGRVYCFGPTFRAEKSKTRRHLTEFWMI 227

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A   ++  M    +++        +             S  E I        Y   
Sbjct: 228 EPEAAFFDHKDNMALQEDLVCHVVAQVLEHCRPELAFLERDTSLLERIVPPFPHITY--- 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                                Q+ G  + + D +      +L ++ E          ++ 
Sbjct: 285 --------------DEAVGILQKLGSDIPYGDDFGGDDETLLTQQFEK------PVFVEC 324

Query: 241 YPA-PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKKI 298
           YP   ++     +P         +L            E++   ++    ++ + + +++ 
Sbjct: 325 YPKGVKAFYMKQHPEREDLVLCDDL-----LAPEGYGEIIGGSQREDDLDRLLGRIREQK 379

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E       +L          SG  MG +RLV  + G  +I E I  P +
Sbjct: 380 LPEESY--SWYLDQRRFGSFPHSGFGMGIERLVAWICGLQHIREAIPWPRT 428


>gi|254362602|ref|ZP_04978696.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153094210|gb|EDN75092.1| lysine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 228

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 24/234 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR-KPLYL 78
           P L++R+ I + +R++F +   +E+++  L      + H+  F+T+         K L+L
Sbjct: 18  PHLIQRSKIITEIRKFFTDRGLLEVETPILSEFSVTDVHLSTFNTQFQSPFSPEAKTLHL 77

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            TSPE+  K+LLAAG   IF     +RN E G  H PEFTMLEWYR H    +L+ +  +
Sbjct: 78  MTSPEYHMKRLLAAGSGPIFQLCKVFRNEEAGKRHNPEFTMLEWYRPHFDMYRLINEVDD 137

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++   +    + FS+Q                  F  Y  +D       P    +  L 
Sbjct: 138 LLQQILDCEPAESFSYQF----------------VFQTYVGLD-------PLSATKAQLV 174

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
            +A++ G++   D+    +   +  E +E N+G    T +  +P+ ++ALA I 
Sbjct: 175 EKARKHGLQCDDDEQRDTLLQFLFSEVVEANIGQERPTAVYHFPSTQAALAQIS 228


>gi|302341786|ref|YP_003806315.1| asparaginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638399|gb|ADK83721.1| asparaginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 454

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/348 (13%), Positives = 93/348 (26%), Gaps = 33/348 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R     ++ E+F +  F  + +  +  S       +   +T   
Sbjct: 121 AHLRPRTNKYGAMFRIRARAALAVHEFFGQRGFCWVHTPIITGSDCEGAGEMFRVTTLPP 180

Query: 68  IQDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            +  +    +     L  S +   +    A    ++ F   +R        H  EF M+E
Sbjct: 181 GEVDLAADFFGRQAGLTVSGQLEAEPFALA-LGDVYTFGPTFRAENSNTPRHAAEFWMIE 239

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A       M    +  +               +            +A          
Sbjct: 240 PEMAFADLADDMALAEDFTKDLTRRVLADCGEDLALFERFVQPGLLAGLAAMVE------ 293

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   ++           +AG +  +   W           +          I+  Y
Sbjct: 294 -----GPFERVSYGQAIDILAKAGRQWEYAPQWGADLQTEHERFLCEEY-FRRPVIVFDY 347

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            D R     +L    +       EL+   ++  R         ++   
Sbjct: 348 PKQIKPFYMRQNDDGRTVAAMDLLVPRV------GELIGGSQREERLGVLEARMGELGLS 401

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  +L          +G  MGF+R ++++TGA NI +VI  P +
Sbjct: 402 AEDY-WWYLDTRRFGSAPHAGFGMGFERFLLMITGAGNIRDVIAYPRT 448


>gi|124006561|ref|ZP_01691394.1| asparaginyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123987974|gb|EAY27654.1| asparaginyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 490

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/374 (14%), Positives = 107/374 (28%), Gaps = 35/374 (9%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +   + H R R          R+    ++ +YF E  F  + +  +  S    
Sbjct: 116 PKKHSMEFLRENAHLRMRTNTFSAVFRLRHAAAYAIHQYFNERGFFYLHAPIITGSDAEG 175

Query: 56  ETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
              +   +T                 +D   +P  L  S +    +L A G   I+ F  
Sbjct: 176 AGEMFQVTTLPLDNPPKNEEGKIDFKEDFFGQPTNLSVSGQL-QGELAAMGLGLIYTFGP 234

Query: 103 AWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  EF M+E   A    E       + ++   +   +            
Sbjct: 235 TFRAENSNTTRHLAEFWMIEPEMAFYEQEDNHNLAEDFLKYLIKYVLENCQDDLKFLDER 294

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPD------QPDRHLLYLQAQQAGIRVAHDDTWS 215
           F++          +    ++    +   D          ++L         +      W 
Sbjct: 295 FTKENNGKPTNERSEMGLLEKLEFVAANDFARVSYTEAINILLNSKPHKKKKFKFPVEWG 354

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
                     +          I+  YP    A       +    +  E       L    
Sbjct: 355 IDMQSEHERYLVEKHFKKPV-IVYDYPRNIKAFYMK--QNEGEEEGRETVRAMDILVPGI 411

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            E++   ++    E       ++    + + E +L          SG  +GF+R ++ +T
Sbjct: 412 GEIIGGSQREDDLEHLKTRMDEVGIPHHEL-EWYLDLRRFGSAPHSGFGLGFERFILFIT 470

Query: 335 GANNINEVIWTPFS 348
           G  NI +VI  P +
Sbjct: 471 GMANIRDVIPFPRT 484


>gi|90579564|ref|ZP_01235373.1| asparaginyl-tRNA synthetase [Vibrio angustum S14]
 gi|90439138|gb|EAS64320.1| asparaginyl-tRNA synthetase [Vibrio angustum S14]
          Length = 466

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/356 (16%), Positives = 110/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI-------- 59
            H R R          RN +  ++  ++ E  FI + +  +  S       +        
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFIWMSAPLITASDCEGAGEMFRVSTLDL 184

Query: 60  --RAFSTE---LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                + E      +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ANVPMTVEGNVDFDKDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + + K   ++++   +   ++         +   + E IT  E 
Sbjct: 244 LAEFWMVEPEVAFAELDDVAKLAEDMLKYVFKAVLEERRDDLEFFASRIDK-EAITRLEQ 302

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F             +  Q D        Q +G +   D  W    S      +       
Sbjct: 303 F----------VTSDFAQVDYTDAIKILQDSGRKFEFDVEWGIDMSSEHERFLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVIVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDILDA 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 406 RMIEMGLDPEHMGWYRDLR-RYGSVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|213389871|gb|ACJ45998.1| putative asparaginyl tRNA synthetase [Palm lethal yellowing
           phytoplasma]
          Length = 471

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 105/358 (29%), Gaps = 44/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +   + E+F +  F+   +  +  S       +  F    +
Sbjct: 129 AHLRLRTKLFGAVFRIRNSVSFFIHEFFQKEGFLYAHTPIITTSDGEGAGEL--FKVTSL 186

Query: 68  IQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
                            D   +P +L  + +    +  A    KI+ F   +R       
Sbjct: 187 DLAKINLNEEKKIDYKKDFFAQPTFLTVTGQL-EGEAFAMAFSKIYTFGPTFRAENSNTP 245

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    +Q +    N+I+   +   +          N   + E++   
Sbjct: 246 RHISEFWMIEPEMAFCDLQQNIIVAQNLIQYVIKCCLK----------NNKKDLEFLENT 295

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +       ++    L    Q            + I       + +  S    + +     
Sbjct: 296 QENNLIKKLEETAYLPKFLQIKYKKAIQILLDSKINFEKKPVYGEDLSLEHEKFLTEIFF 355

Query: 232 INCCTILDRYPAPESALANIYPADPRF-TKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                 +  +P    A       D         L+    EL               + ++
Sbjct: 356 KQP-IFVIDWPKKIKAFYMKNNLDNETVAAMDLLFPKVGELIGGSQREEKLEVLEEKMKE 414

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                K++    + +D   L         SG  MG +R ++ +TG +NI +VI  P +
Sbjct: 415 FNISFKEL---QWYLD---LRRF-GSCIHSGFGMGLERFLVYLTGLDNIRDVIAFPRT 465


>gi|195154100|ref|XP_002017960.1| GL17018 [Drosophila persimilis]
 gi|194113756|gb|EDW35799.1| GL17018 [Drosophila persimilis]
          Length = 533

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 109/358 (30%), Gaps = 54/358 (15%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +    R+   E  F EI +  +  +  +E    
Sbjct: 204 NQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAA-SEGGAN 262

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F+             YL  SP+   +  +AA  +K++     +R  +     H  EF  
Sbjct: 263 VFTVSYFKDSA-----YLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVG 317

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A + +   +                                 Y    E+  +   
Sbjct: 318 LDLEMAFKYHYHEVLHT---------------IGNTFTAIFKGLRDNYSREIESVGQQYK 362

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +D    L+ P            ++AG+    ++  S    ++L   ++     +   ILD
Sbjct: 363 VDAFKFLEPPLILQFSEGVAMLREAGVETGDEEDLSTPNEKLLGRLVKAKYDTD-FYILD 421

Query: 240 RYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           ++P           P++  ++  ++++    E+ +    + DP     R       K   
Sbjct: 422 KFPLAIRPFYTMPDPSNSTYSNSYDMFMRGEEILSGAQRIHDPEYLIER------AKHHG 475

Query: 299 YNETYPIDEDFLA-----CLTEMPQ---SSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                P     L          +P    + GI M  +R+VML  G +NI +    P  
Sbjct: 476 IGLIPPK----LRHTSSPSRYGLPPRTPAGGIGM--ERVVMLYLGLDNIRKTSMFPRD 527


>gi|170761393|ref|YP_001786410.1| aspartyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|169408382|gb|ACA56793.1| aspartate--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 429

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 116/341 (34%), Gaps = 39/341 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N I +  RE+  +  F EI +  + +            TE+    +  
Sbjct: 122 RHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVW--EGAEGG----TEVFKVKYFE 175

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQ 131
              YL  SP+F  + ++ AG E++F   HA+R  E     H  E+  ++      E  + 
Sbjct: 176 NTAYLAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKD 235

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +++   E  N++   + ++  +   + E                        +
Sbjct: 236 IMEVEERLLKFILERLNKECNEYFDLLDSELPKVED----------------EIPKITFK 279

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +L  +  +  +    D     +       K       +    L  YP  +  +  +
Sbjct: 280 EALDILSKEYNKNNLTCDLDPEGEKLI-----CKYAKEKLNSDFIFLTNYPRKKRPMYTM 334

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P     T  F+L    IE+      + D          +  + K    + Y   E +L+
Sbjct: 335 -PLGKDGTHSFDLLFRGIEITTGGQRIHDYNMLV-----DNMKFKGFNPKDY---ESYLS 385

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                MP+  G+A+G +RL   + G  N+ E       ++ 
Sbjct: 386 AFKYGMPKHGGLAIGLERLTSRLLGLENVREATLITRDRTR 426


>gi|285018513|ref|YP_003376224.1| asparaginyl-tRNA synthetase (asnrs) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473731|emb|CBA16234.1| probable asparaginyl-trna synthetase (asnrs) protein [Xanthomonas
           albilineans]
          Length = 466

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 106/356 (29%), Gaps = 43/356 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       RN +  ++  YF +N +  I +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLFGAVTRIRNCLAQAVHRYFHQNGYHWISTPIITTSDAEGAGQMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 TNLPRDGKGQVDFSRDFFGKETFLTVSGQLNVEAYCLA-LSKVYTFGPTFRAENSHTTRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A     +  +   + ++       ++    +  +    +E    T    
Sbjct: 244 LAEFWMIEPEIAFADLAEDARVAEDFLKSLFRAVLEE----RGDDLAFLAERVDKTAISK 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N          ++ +        Q++G        W           +     + 
Sbjct: 300 LESFVN-------SPFERIEYTDAIGLLQRSGQTFEFPVEWGLDLQTEHERWLTEQH-VG 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              ++  YP    A       D +             L     E++   ++  R +   +
Sbjct: 352 RPVVVTNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDR 405

Query: 294 EKKKIYNETYPIDE--DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +   +        DF          +G  +GF+RLV+ V G +NI + I  P 
Sbjct: 406 RMLQFGLDPQHYGWYRDFRR--YGTVPHAGFGLGFERLVVYVCGLSNIRDAIPYPR 459


>gi|168178430|ref|ZP_02613094.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670401|gb|EDT82375.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 429

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/331 (17%), Positives = 113/331 (34%), Gaps = 39/331 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N I +  RE+  +  F EI +  + +            TE+    +  
Sbjct: 122 RHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVW--EGAEGG----TEVFKVKYFE 175

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQ 131
              YL  SP+F  + ++ AG E++F   HA+R  E     H  E+  ++      E  + 
Sbjct: 176 NTAYLAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKD 235

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +++   E  N++   + ++  +   + E                        +
Sbjct: 236 IMEVEERLLKFILEKLNKECKEYFDLLDSELPKIE----------------SEIPKITFK 279

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +L  +  +  +    D     +       K       +    L  YP  +  +  +
Sbjct: 280 EALDILIKEYNKNNLTCDLDPEGEKLI-----CKYAKEKLDSDFIFLTNYPREKRPMYTM 334

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P     T  F+L    IE+      +            +  E K    + Y   E +L+
Sbjct: 335 -PLGKDGTHSFDLLFRGIEITTGGQRIHGYNMLV-----DNMEFKGFNPKDY---ESYLS 385

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                MP+  G+A+G +RL   + G  N+ E
Sbjct: 386 AFKYGMPKHGGLAIGLERLTSRLLGLENVRE 416


>gi|320583689|gb|EFW97902.1| Mitochondrial asparaginyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 469

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 103/357 (28%), Gaps = 42/357 (11%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +  IP   W   +        L   + ++SS  ++F E+ F +    ++  S       +
Sbjct: 140 LRSIPEYRWRVPEAG----SILRMSSKLESSFSKFFDEHSFFKTHPPTVTSSDCEGAGEL 195

Query: 60  RAFSTELII-----QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLH 113
             F  E        +    K  Y+  S +    ++L A   +++     +R  E     H
Sbjct: 196 --FRIESDSKLGSREQFFGKKAYMTVSTQLHL-EVLCAALGRVWTLTPCFRAEESDTNRH 252

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   A       +      +           +  + +  + F E    T    
Sbjct: 253 LSEFWMLEAEIAFIDDVSQLTRFSEEM---------LRYVARTLQNSGFDEFSEETKQRW 303

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                            Q          +Q          W D       + +       
Sbjct: 304 DMLANG--------TYTQITYSEAIDLVRQNSTNFKTVPMWGDSLGSEHEKWLAGEYYKG 355

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEM 292
               +  YP  +         D +    ++L    I EL        D      + E+E 
Sbjct: 356 PV-FVTNYPEDQKPFYMKKNNDGKTVACYDLLIPQIGELIGGSLREHD----LQKLEQET 410

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +++            +L           G  MGF+RL+  ++GA NI + I  P +
Sbjct: 411 ADRQMDIGPLQ----WYLNLRKNGSVPHGGFGMGFERLLQYMSGAENIRDTIPFPRT 463


>gi|239631431|ref|ZP_04674462.1| asparaginyl-tRNA synthetase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|239525896|gb|EEQ64897.1| asparaginyl-tRNA synthetase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 432

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+      RN +  +  E+F    FI++D   L   +P         
Sbjct: 116 LDHRHLWLRSK--RQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  K  YL  S +   +    A   K+F     +R  +     H  EF M+E
Sbjct: 167 TTELFETDYFDKKAYLSQSGQLYAEAGAMAY-GKVFTCGPVFRAEKSKTRRHLTEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ +K     +    +                      +          + D
Sbjct: 226 PEMAFCHQEESLKVQERYVAYLVQSV--------------------LDNCAYPLHLLDRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                     P   + Y QA +       D  + D F       +      +    +  Y
Sbjct: 266 PEVLKQYTKLPYPRITYKQAIKMLQDAGMDVKYGDDFGSPEETYLSDQ--FDQPVFVLNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P        +   +       +    ++       E++   E+   ++  K   E   + 
Sbjct: 324 PKTIKPFYMLTDPEDDQ----QYVCADMLAPEGYGEIIGGSERETDYDTLKNAIEHAGLD 379

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + Y   E +L          SG  +G +R +  V   +++ E I  P  
Sbjct: 380 LDEY---EWYLDLRKYGSVPHSGFGLGLERAITWVCKLDHLREAIPFPRM 426


>gi|320450960|ref|YP_004203056.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151129|gb|ADW22507.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 422

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 99/341 (29%), Gaps = 41/341 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              + R  L  +  +    R Y     F EI +  +  +     + +          D+ 
Sbjct: 117 RGEKARAPLRVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAEGGSGL-------FGVDYF 169

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQ 131
               YL  SP+   K+++    E+++  A  WR  E     H  E+  L+        E+
Sbjct: 170 EYRAYLAQSPQLY-KQIMVGVFERVYEVAPVWRMEEHNTSRHLNEYLSLDVEMGFIEGEE 228

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +      +              +                               + P  
Sbjct: 229 DLMRLEENLLQEMLEEALSSAGNEIRLLEAEWP------------------SFPKEIPRL 270

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  +  ++ G  V  D   S+   R+L +  +   G +    +  YP         
Sbjct: 271 THAEARRILKEELGYPVGQD--LSEEAERLLGQYAKERWGSD-WLFITHYPRSLRPFYTY 327

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P +   T+ F+L    +E+ +    +    +     +      K +  E +     +L 
Sbjct: 328 -PEENGTTRSFDLLFRGLEITSGGQRIHRYPDLVESLKA-----KGMDPEAFQ---GYLE 378

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                MP   G A+G +RL   + G  N+      P  +  
Sbjct: 379 VFKYGMPPHGGFAIGAERLTQKLLGLPNVRYARAFPRDRHR 419


>gi|327282572|ref|XP_003226016.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Anolis carolinensis]
          Length = 480

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 95/359 (26%), Gaps = 32/359 (8%)

Query: 2   HQIPSQPWW-NRDFHYRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PG 54
           HQ P +          R       L  R+    ++  YF +N ++ I +  +  +     
Sbjct: 134 HQ-PLEYLRQFPHVRCRSNSLSALLRIRSEATGAIHSYFKDNGYLHIHTPIITSNDCEGA 192

Query: 55  NETH----IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
            E       +              P +L  S +    +++A    K++ F   +R     
Sbjct: 193 GEVFQVEPAKEVKEPEENPHFFNIPAFLTVSGQLHL-EVMAGAFTKVYSFGPTFRADYSQ 251

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   A     Q +   M  +                   +    P    
Sbjct: 252 SRKHLAEFYMVEAELAFVESLQDVMQIMEDLFKRVTDVVLSKCPHDIELFHKHVAPGQKA 311

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             E       I +  T                + A     +   W         + +  +
Sbjct: 312 KLEKMLNNQFITMPYT----------EAIEVLKGAREYFTYKPEWGQDLQSEHEKYLLKH 361

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
            G     I   YP            D        +      L     EL     +  R +
Sbjct: 362 CGEIPVFIF-NYPYDLKPFYMRDNEDGVHHTVAAV----DLLVPGVGELCGGSLREDRLD 416

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 +++  E     + +L           G  MGF+R +  + G  NI +VI  P 
Sbjct: 417 FLQSRLQRLGLEDTY--QWYLELRQFGSTPHGGFGMGFERYLRCILGVENIKDVIPFPR 473


>gi|191638480|ref|YP_001987646.1| asparaginyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|301066535|ref|YP_003788558.1| aspartyl/asparaginyl-tRNa synthetase [Lactobacillus casei str.
           Zhang]
 gi|190712782|emb|CAQ66788.1| Asparaginyl-tRNA synthetase (Asparagine--tRNA ligase) (AsnRS)
           [Lactobacillus casei BL23]
 gi|300438942|gb|ADK18708.1| Aspartyl/asparaginyl-tRNA synthetase [Lactobacillus casei str.
           Zhang]
 gi|327382514|gb|AEA53990.1| Asparaginyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385711|gb|AEA57185.1| Asparaginyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 432

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+      RN +  +  E+F    FI++D   L   +P         
Sbjct: 116 LDHRHLWLRSK--RQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  K  YL  S +   +    A   K+F     +R  +     H  EF M+E
Sbjct: 167 TTELFETDYFDKKAYLSQSGQLYAEAGAMAY-GKVFTCGPVFRAEKSKTRRHLTEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ +K     +    +                      +          + D
Sbjct: 226 PEMAFCHQEESLKVQERYVAYLVQSV--------------------LDNCAYPLHLLDRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                     P   + Y QA +       D  + D F       +      +    +  Y
Sbjct: 266 PEVLKQYTKLPYPRITYKQAIKMLQDAGMDVKYGDDFGSPEETYLSDQ--FDQPVFVLNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P        +   +       +    ++       E++   E+   ++  K   E   + 
Sbjct: 324 PKTIKPFYMLTDPEDDQ----QYVCADMLAPEGYGEIIGGSERETDYDTLKNAIEHAGLD 379

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + Y   E +L          SG  +G +R +  V   +++ E I  P  
Sbjct: 380 LDEY---EWYLDLRKYGSVPHSGFGLGLERAITWVCKLDHLREAIPFPRM 426


>gi|116494969|ref|YP_806703.1| aspartyl/asparaginyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227535028|ref|ZP_03965077.1| aspartyl/asparaginyl-tRNA synthetase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|122263613|sp|Q038W1|SYN_LACC3 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116105119|gb|ABJ70261.1| asparaginyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227187343|gb|EEI67410.1| aspartyl/asparaginyl-tRNA synthetase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 432

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 105/350 (30%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+      RN +  +  E+F    FI++D   L   +P         
Sbjct: 116 LDHRHLWLRSK--RQFAIQQIRNEMIRATFEFFNNEGFIKMDPPILTDSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  K  YL  S +   +    A   K+F     +R  +     H  EF M+E
Sbjct: 167 TTELFETDYFDKKAYLSQSGQLYAEAGAMAY-GKVFTCGPVFRAEKSKTRRHLTEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ +K     +    +                      +          + D
Sbjct: 226 PEMAFCHQEESLKVQERYVAYLVQSV--------------------LDNCAYPLHLLDRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                     P   + Y QA +       D  + D F       +      +    +  Y
Sbjct: 266 PEVLKQYTKLPYPRITYKQAIKMLQDAGMDVKYGDDFGSPEETYLSDQ--FDQPVFVLNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P        +   +       +    ++       E++   E+   ++  K   E   + 
Sbjct: 324 PKTIKPFYMLTDPEDDQ----QYVCADMLAPEGYGEIIGGSERETDYDTLKNAIEHAGLD 379

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + Y   E +L          SG  +G +R +  V   +++ E I  P  
Sbjct: 380 LDEY---EWYLDLRKYGSVPHSGFGLGLERAITWVCKLDHLREAIPFPRM 426


>gi|225873796|ref|YP_002755255.1| asparagine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225794514|gb|ACO34604.1| asparagine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 452

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/347 (17%), Positives = 110/347 (31%), Gaps = 39/347 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAF 62
           +  +  W R    R+   L  R  I  + R++  +N FI  D   L  +     + +   
Sbjct: 131 MEHRHLWIRT--PRQSAILRIRAEIIKAARDFLDDNGFILTDPPILTPAACEGTSTLFPV 188

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                   +     YL  S +   +    A   K++ F   +R  +     H  EF M+E
Sbjct: 189 E-------YFGDEAYLTQSGQLYIESTALA-LGKVYSFGPTFRAEKSKTRRHLTEFWMVE 240

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A+   + LM      I         +  +   V                 A+  +I 
Sbjct: 241 PEWAYAGLDDLMGLAEQFISFIVGRVLTRRAADLKVLGRD------------VAKLQSIQ 288

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                 + D+  + L    A+     + H   + + F       I      +   ++ RY
Sbjct: 289 APFPRLSYDEAAQMLNDAHAKGL---LEHPFEYGNDFGSPDETYISSQ--FDRPVMVHRY 343

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           PA   A       DP  +K        +       E++   ++   +E  K+  E  ++ 
Sbjct: 344 PAAVKAFYM--EPDPENSKYALCVD--VLAPEGYGEIIGGSQRISSYELLKQRIEDHQLP 399

Query: 300 NETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            E +     +L          SG  MG +R V  + G  ++ E I  
Sbjct: 400 LEAFQ---WYLDLRRYGSVPHSGFGMGIERAVAWICGLEHVRETIPF 443


>gi|50293427|ref|XP_449125.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528438|emb|CAG62095.1| unnamed protein product [Candida glabrata]
          Length = 467

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 105/359 (29%), Gaps = 40/359 (11%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQYS-PGNETH 58
           +  +P+     +         L  R+ ++     +F +   F+++       +       
Sbjct: 129 LRTLPT----LKHRSLFYGSILRFRSHMEEYAINFFNKQENFLKVSPPIFTTNDCEGAGE 184

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
              F  +  + +   K  +L  S +    ++L+      +  +  +R  +     H  EF
Sbjct: 185 Q--FEVKSSVLE--NKKAFLTVSTQLHL-EILSMAIANCWTLSPCFRAEKSATPRHLMEF 239

Query: 118 TMLEWYRAHESY-EQLMKDCMNIIRCAAEVANQ-------KIFSFQNVNCNPFSEPEYIT 169
            MLE   +     +QL+    N ++       +          S            + + 
Sbjct: 240 WMLEAEMSFIDNLDQLLDFTRNFLQSMVTQCYENREDLLPDNISTLINKEKILERWQMLR 299

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
            +E + R    D    L      +    Y               W +       + +   
Sbjct: 300 NSENWKRITYTDAIQILKEKHSQEPFPRYK------------PKWGEALQTEHEKWLAEK 347

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
              +    +  YP    A       D +    F+L    +          D  E      
Sbjct: 348 YFQSPV-FVTDYPMDCKAFYMKSNEDGKTVACFDLLVPEMGEIIGGSMREDNYESL---- 402

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            + Q KK+  N T  +D  ++      +    G  +GF+R +  + G  NI + I  P 
Sbjct: 403 -QYQIKKRGMNNTGELDW-YVNLRKQGVAPHGGFGLGFERFISYLLGIQNIKDTIPFPR 459


>gi|33519875|ref|NP_878707.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|59798582|sp|Q7VR09|SYN_BLOFL RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|33504220|emb|CAD83483.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 470

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 112/360 (31%), Gaps = 46/360 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R R  +       R+++  S+        FI + +  +  S   E + + F    ++
Sbjct: 126 AHLRPRTHIFGAISRIRHVLFQSIHNLMNTKGFIWVPTPIITASD-TEGNSKMFYVSELL 184

Query: 69  QDH-----------------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
            +                    K  +L  S + + +    A   K++ F   +R      
Sbjct: 185 NNSKKSQNICNSHQKIPELFFGKEAFLTVSGQLNVESYACA-LTKVYTFGPTFRAEHSNT 243

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF MLE   A      ++K   ++++   +   ++  +      +   E   I  
Sbjct: 244 NRHLAEFWMLEPEMAFTDLNIIIKIADSLLKDIVQTILEQCINDIEYCASHIKEYNLIKR 303

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            E F         + + + +  D   L     +      +   W         + +    
Sbjct: 304 LENFLH-------SKIIHIEYTDAIKLLSSCDK---TFNNTIYWGMDLFSEHEKYLSEEY 353

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
             +   I   +P    A       D +     ++    I       E++   ++  R   
Sbjct: 354 FQSPIVIK-NHPKNIKAFYMRLNDDNKTVSSMDILVPGI------GEIIGGSQREERLSI 406

Query: 291 EMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +   +   +T      +   L        SG  +GF+RL++ +TG  NI + +  P +
Sbjct: 407 LDKRLLENNLKTECY--WWYRDLRRYGTVPHSGFGLGFERLIIYITGLTNIRDAVPFPRT 464


>gi|297816700|ref|XP_002876233.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322071|gb|EFH52492.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 103/339 (30%), Gaps = 45/339 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPL 76
           +  +  ++ + +   E  +   F+ I +  L    S G     R         ++  +P 
Sbjct: 242 QAIVALKSQLVNFFSENLLSKDFVNIFTPKLLAGSSEGGSAVFR--------LEYQGQPA 293

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  +     ++F     +R  +     H  EF  L+     + +   + D
Sbjct: 294 CLAQSPQLHKQMAICGDLRRVFEIGPVFRAEKSFSHRHLCEFVGLDVEMEIDKHYSEIMD 353

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +  A   +       +          E +   E   R                   
Sbjct: 354 LVDELFVAIFTSLNSKCKKELEAIGKQYPFEPLKFLEKTLRLT---------------FE 398

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                 ++AG+ +      +    R L + +          IL R+P        +   D
Sbjct: 399 EGVQMLKEAGVEIDPLGDLNTESERKLGQLVLEKYNTE-FYILHRFPTAVRPFYTMTCVD 457

Query: 256 -PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFL 310
            P ++  F+++    E+ +    +  P     R  +            + ID      ++
Sbjct: 458 NPLYSNSFDVFIRGEEIISGAQRIHTPELLEQRARE------------HGIDVKTISTYI 505

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G   G +R+VML  G NNI +    P  
Sbjct: 506 DSFRYGAPPHGGFGAGLERVVMLFCGLNNIRKTSLFPRD 544


>gi|170754606|ref|YP_001780645.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169119818|gb|ACA43654.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 429

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/331 (17%), Positives = 115/331 (34%), Gaps = 39/331 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N I +  RE+  + +F EI +  + +            TE+    +  
Sbjct: 122 RHPKVNSIFKVQNSIVNGFREFLNKEEFTEIYTPKIVW--EGAEGG----TEVFKVKYFE 175

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQ 131
              YL  SP+F  + ++ AG EK+F   HA+R  E     H  E+  ++      E  + 
Sbjct: 176 NTAYLAQSPQFYKQMMVGAGFEKVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKD 235

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +++   E  N++   + ++  +   + E                        +
Sbjct: 236 IMEVEERLLKFILEKLNKECKEYFDLLDSELPKIE----------------SEIPKITFK 279

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +L  +  +  +    D     +       K       +    L  YP  +  +  +
Sbjct: 280 EALDILSKEYNKNNLTCDLDPEGEKLI-----CKYAKEKLNSDFIFLTNYPREKRPMYTM 334

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P     T  F+L    IE+      + D          +  + K    + Y   E +L+
Sbjct: 335 -PLGKDGTHSFDLLFRGIEITTGGQRIHDYNMLV-----DNIDFKGFNPKDY---ESYLS 385

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                MP+  G+A+G +RL   + G  N+ E
Sbjct: 386 AFKYGMPKHGGLAIGLERLTSRLLGLENVRE 416


>gi|269986157|gb|EEZ92470.1| asparaginyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 427

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 111/348 (31%), Gaps = 45/348 (12%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFS 63
            +  W R    +    +  R+ + SS+ E+F EN F EI + S       G  T    F 
Sbjct: 114 ERHLWLRS--PKMTAIMKIRSTVFSSIHEFFSENGFYEIQAPSFVGGSVEGGATL---FE 168

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T     ++  K  YL  S +   + ++ +   KI+  A ++R  +     H  EF   E 
Sbjct: 169 T-----NYFNKKAYLTQSWQLYAEAMVNS-LWKIYTVAPSFRAEKSRTWRHLTEFWHAEA 222

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A ++ E  +     +I+   +    K                     +   R   +  
Sbjct: 223 EMAFKTNEDAIDLEEKLIKYVVKNVLIKNP----------------DELKLLKRDTTMLE 266

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                   +     +   A + G+++ +         R++         ++       YP
Sbjct: 267 NVVNKPFLRMKYEEIIDLANKNGLKLEYGADLGADEERVI------TSKLDVPVFSIDYP 320

Query: 243 APESALANIYPADPRFTKRFELY--ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
                  +    D +     +L       E+      + D     +R +K+  +     +
Sbjct: 321 IELKPFYHKPAVDGKHVLCNDLLAPEGYGEIIGGGQRVDDKETLLNRLKKDGLD---GKD 377

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + ID             SG  +G DRLVM +    +I   +  P +
Sbjct: 378 YEWYIDLR----RYGAIPHSGFGVGVDRLVMWICKLPHIMYAVPFPRT 421


>gi|153801330|ref|ZP_01955916.1| asparaginyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124123155|gb|EAY41898.1| asparaginyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 368

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +   ST  +
Sbjct: 27  AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDM 86

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 87  ENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAIS-KVYTFGPTFRAENSNTSRH 145

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      + K   ++++   +    +    +  +   F++     V   
Sbjct: 146 LAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVIAR 201

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++   D           D        +  G        W    +      +       
Sbjct: 202 LEQFVESDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKA 254

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 255 PVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDILDA 307

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 308 RMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 362


>gi|116491117|ref|YP_810661.1| asparaginyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|122276701|sp|Q04EX6|SYN_OENOB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|116091842|gb|ABJ56996.1| asparaginyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 434

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 111/348 (31%), Gaps = 44/348 (12%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +    H +    +  R+ I  ++ ++F ++ F+++DS  +   +P         +T
Sbjct: 120 ERHLYL--RHQKPFATMKIRDEIIRAIYDFFHKDGFLKLDSPIITDSAPEG-------TT 170

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWY 123
           EL    +  K  YL  + +   +    A   K++ F   +R  +     H  EF M++  
Sbjct: 171 ELFPVKYFDKDAYLSQTGQLYAEAGAMA-FGKVYDFGPTFRAEKSSTRRHLTEFWMIDAE 229

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A    E  +K     I    E                      +   +   +    D+ 
Sbjct: 230 MAWMHQEDSLKVQERFIAYLIERV--------------------VDNCQVELKMLGRDVE 269

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                   P   + Y  A +          W   F       +      N    +  +P 
Sbjct: 270 KLRAYTKLPYPRISYDDAVKLLQDNDFKIEWGVDFGSPEETFLAKR--FNSPFFIVNFPK 327

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIYNE 301
              A     P     ++   + + ++       E++   E+   ++  K+    + +   
Sbjct: 328 AIKAFYMKRPP----SRDDVVISADMLAPEGYGEIIGGSERDTDYDYLKQQIISQHLDLS 383

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            Y     +L          SG  +G +RL+  + G ++I E I  P +
Sbjct: 384 EY---SWYLDLRKYGTVPHSGFGLGLERLIRFIAGEDHIRETIPFPRT 428


>gi|269968459|ref|ZP_06182473.1| asparaginyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269826933|gb|EEZ81253.1| asparaginyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 472

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 131 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 188

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 189 DMENLPRTDAGKVDYNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTS 247

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    + + K   ++++   +    +             + E IT  
Sbjct: 248 RHLAEFWMVEPEVAFAELDDVAKLAEDMLKYVFKAVLAECRDDLEFFAQRIDK-EAITRL 306

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D          +G        W    S      +     
Sbjct: 307 EQF----------VSSDFAQVDYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHF 356

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 357 KAPVIVK-NYPKDIKAFYMRANDDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 409

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 410 DARMREVGIDPEHMSWYRDLRK-YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 466


>gi|184155665|ref|YP_001844005.1| asparaginyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|183227009|dbj|BAG27525.1| asparaginyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 431

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 110/351 (31%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    + +  +  R+ +  +  E+F E+ F +ID   L   +P         
Sbjct: 115 LDHRHLWLRSS--KPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +   ++  A    +++ F   +R  +     H  EF M+E
Sbjct: 166 TTDLFHTEYFDQDAYLSQSGQLY-EEAGAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      I            D
Sbjct: 225 PEMAFMHQEESLELQEQYVAYLIQKV--------------------IDDCSRELEVLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             T       P   + Y +A +   +   D  W + F       +      +    +  Y
Sbjct: 265 PETLKPFTQLPYPRISYDEAIEMLQKAGMDIKWGEDFGSPEETYLADQ--FSKPVFVLNY 322

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCN-ACDELLDPIEQRHRFE--KEMQEKKKI 298
           P                  R ++Y C   L      E++   E+   +E  ++      +
Sbjct: 323 PKAIKPFYMK-----GHPTRDDVYVCADLLAPEGYGEIIGGSERETDYETLRQAIADAGL 377

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + Y     +L          SG  +G +R +  +   +++ E I  P  
Sbjct: 378 DEKDYQ---WYLDLRKYGSVPHSGYGLGLERFLTWIALQDHVRETIPFPRL 425


>gi|61676008|gb|AAX51669.1| lysyl tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 223

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 90/229 (39%), Gaps = 18/229 (7%)

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPFSEP 165
           H PEFT+LE Y AH  Y  +M+   N++   A   +           S +    +  +  
Sbjct: 1   HNPEFTLLEAYAAHWDYNDMMRTMENLVEKLALELHGTTLLKVTDPESGKEAEIDVKAPW 60

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + +T+ E+   YANID+    D         L L+      +         + + +   K
Sbjct: 61  KRMTMKESINTYANIDVDALSDEELYK----LVLECSHLEAKKIKTFPRGLMINALFEHK 116

Query: 226 IEPNLGINCCTILDRYPAPESALANIYP----ADPRFTKRFELYACNIELCNACDELLDP 281
           +EP+  +     +  +P   + L   +      +    +RFE +    E  NA  EL DP
Sbjct: 117 VEPH--LIQPHHITDFPIETTPLCKPHRDPAEREKGIVERFESFIMGGEFSNAYTELNDP 174

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLAC-LTEMPQSSGIAMGFDRL 329
           + Q     ++   K     E  P D +F+      MP + GI +G DRL
Sbjct: 175 VIQYQLLAEQAARKAIGDEEANPFDHEFVEAICQGMPPTGGIGIGIDRL 223


>gi|227514855|ref|ZP_03944904.1| asparagine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227086787|gb|EEI22099.1| asparagine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 436

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 110/351 (31%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    + +  +  R+ +  +  E+F E+ F +ID   L   +P         
Sbjct: 120 LDHRHLWLRSS--KPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEG------- 170

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +   ++  A    +++ F   +R  +     H  EF M+E
Sbjct: 171 TTDLFHTEYFDQDAYLSQSGQLY-EEAGAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIE 229

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      I            D
Sbjct: 230 PEMAFMHQEESLELQEQYVAYLIQKV--------------------IDDCSRELEVLGRD 269

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             T       P   + Y +A +   +   D  W + F       +      +    +  Y
Sbjct: 270 PETLKPFTQLPYPRISYDEAIEMLQKAGMDIKWGEDFGSPEETYLADQ--FSKPVFVLNY 327

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCN-ACDELLDPIEQRHRFE--KEMQEKKKI 298
           P                  R ++Y C   L      E++   E+   +E  ++      +
Sbjct: 328 PKAIKPFYMK-----GHPTRDDVYVCADLLAPEGYGEIIGGSERETDYETLRQAIADAGL 382

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + Y     +L          SG  +G +R +  +   +++ E I  P  
Sbjct: 383 DEKDYQ---WYLDLRKYGSVPHSGYGLGLERFLTWIALQDHVRETIPFPRL 430


>gi|313680007|ref|YP_004057746.1| asparaginyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152722|gb|ADR36573.1| asparaginyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 439

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 107/349 (30%), Gaps = 35/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAF 62
           +  +  W R    R    +  R+ I+ +  ++F +  F+  D+  L  +     T +  F
Sbjct: 116 MDHRHLWLRHR--RPWAVMRIRDEIERATYDFFAQRGFVRFDTPILTPNAVEGTTEL--F 171

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             +L       +  YL  S +   +    A   K++ F   +R        H  EF M+E
Sbjct: 172 EVDLFD----GQKAYLSQSGQLYAEAGALAY-GKVYTFGPTFRAERSKTRRHLLEFWMVE 226

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   +E  +      +         ++   +                      A ++
Sbjct: 227 PEAAFLDHEGNVALQEAYVSYLV----GRVLEHRARELELLGRDP-----------AALE 271

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILDR 240
                D P    +  + L  + A      D   + + F       I  +   +    +++
Sbjct: 272 PAAAGDYPRLTYKEAIDLLEKIAASDPEVDALPYGEDFGAPHEAAI--SRRFDRPVFIEK 329

Query: 241 YPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YPA   +        DP   K  +L            E++   E+ H     ++  ++  
Sbjct: 330 YPAAIKAFYMQPDDEDPSLVKNDDL-----LAPEGYGEIIGGSERIHEPGLLLKRIREHG 384

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 D             +G  +G +R V  + G  ++ E I  P  
Sbjct: 385 LPEEVFDWYLDLRRYGSVPHAGFGLGLERTVAWIAGLAHVREAIPFPRM 433


>gi|224534853|ref|ZP_03675422.1| asparagine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224513793|gb|EEF84118.1| asparagine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 462

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 104/357 (29%), Gaps = 44/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 AHLRIRTNTFGAVARIRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QDHIR--------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + +               K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKLNNSLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +              P+ +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLSDNIVLAEDLLKYLLSSILNEC-------------PQDMDFLEN 286

Query: 174 FARYANIDLGTTLDN--PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I     + N   +           + +      +  W           +   + 
Sbjct: 287 YIEKGLIKKLENVINSSFEVITYTKAIEILESSKKSFEINPYWGVDLQTDHERYLTEEIF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                ++D     ++    I   +        L     E+    +   D  +  +R ++ 
Sbjct: 347 KKPVVVIDYPKNFKAFYMKINKDNKTVKGMDVLVPRIGEIIGGSEREDDLQKLENRIKEL 406

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 407 NLNIEHLN---WYLD---LRRF-GSTPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 456


>gi|170017007|ref|YP_001727926.1| asparaginyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803864|gb|ACA82482.1| Asparaginyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 435

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 107/346 (30%), Gaps = 40/346 (11%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +    H +    L  RN + ++  E+F E  F ++DS  L   +P         +T
Sbjct: 121 ERHLYL--RHLKPFATLKIRNTLIAATYEFFNERGFTKLDSPLLTGSAPEG-------TT 171

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           EL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E  
Sbjct: 172 ELFETDYFGEPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMVEPE 230

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A    E+ ++     I        ++                     E        D  
Sbjct: 231 MAFMHQEESLEIQEAYIAFLIAKVLERN--------------------EQELDILERDKD 270

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                 + P   + Y  A +       D  W   F       +  +        +  +P 
Sbjct: 271 LLRSYTELPYPRVSYDDAIKLLQDNGFDVAWGVDFGSPEETFLANHFA--KPVFIVNFPK 328

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
              A           T+   + + ++       E++   E+   ++   +          
Sbjct: 329 AIKAFYMKR----HATRDDVVISADLLAPEGYGEIIGGSERDTDYDYLKERIAAEGLNQD 384

Query: 304 PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              E +L          SG  +G +R+V  VTG  +I E I  P  
Sbjct: 385 EY-EWYLDLRKYGSVPHSGFGLGLERMVTFVTGEEHIREAIPFPRM 429


>gi|305665273|ref|YP_003861560.1| asparaginyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710028|gb|EAR02260.1| asparaginyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 477

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 117/378 (30%), Gaps = 46/378 (12%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +     H R R       +  R+ +  ++ +YF +N F    +  +  S    
Sbjct: 106 PKKHSLEFLREKAHLRVRTNTFAAVMRVRSALAFAIHQYFRQNDFYYFHAPIVTGSDAEG 165

Query: 56  ETHIRAFSTELIIQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
              +  F    +                 D   K   L  S +   +        K++ F
Sbjct: 166 AGEM--FRVTTLDSKNPPLNEEGEVNYKEDFFGKETNLTVSGQLEAEAYAMG-LGKVYTF 222

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A    +  M    + I+       +          
Sbjct: 223 GPTFRAENSNTSRHLAEFWMVEPEMAFYDLDANMDLAEDFIKNVIAYILEHCNEDLQFLE 282

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDN--------PDQPDRHLLYLQAQQAGIRVAHD 211
               + E        +    I+    + +         +  D        ++   +   +
Sbjct: 283 KRLLDEEKSKPQAERSDMPLIEKLKFICDNEFKRVTYTEAIDILRNSKPNKKKKFKYPIN 342

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
           +  +D+ S      +E +    C  IL  YPA   A       D +  +  ++    I  
Sbjct: 343 EWGADLQSEHERFLVEKH--FKCPVILFDYPAKIKAFYMRLNEDGKTVRAMDILFPGI-- 398

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
                E++   ++  R +   ++   +  +   +   +L        + SG  +GF+RLV
Sbjct: 399 ----GEIVGGSQREERLDVLKEKIADLGIDEEEL-WWYLDLRKFGTAEHSGFGLGFERLV 453

Query: 331 MLVTGANNINEVIWTPFS 348
           +  TG  NI +VI  P +
Sbjct: 454 LFATGMGNIRDVIPFPRT 471


>gi|221053089|ref|XP_002257919.1| asparagine--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193807751|emb|CAQ38456.1| asparagine--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 586

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 67/414 (16%), Positives = 115/414 (27%), Gaps = 90/414 (21%)

Query: 3   QIPSQPWW---NRDF-HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +       R+  H R R       +  RN +  +   +F    F+ I +  +  S 
Sbjct: 187 PLSKKNHGREFLREVAHLRPRSYFISSVIRIRNALAIATHLFFQSRGFLYIHTPLITTSD 246

Query: 53  --PGN-----------------------------------ETHIRAF------------- 62
              G                                     TH                 
Sbjct: 247 CEGGGEMFTVTTLLGEDADYSAIPRVKKLAKEGKKREDIQATHAADVGGDESRSGNAHES 306

Query: 63  ---STELI---IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQP 115
               T+ +    +D   K  +L  S + S +  L +    ++ F   +R        H  
Sbjct: 307 SAQPTQYLIDYKKDFFSKQAFLTVSGQLSLEN-LCSSMGDVYTFGPTFRAENSHTSRHLA 365

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A       M+   + I+          F             E        +
Sbjct: 366 EFWMIEPEIAFADLYDNMELAESYIKYCIGYVLSNHFDDIYY-------FEKNVENGLIS 418

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
           R  N+               LL   +++  + V     W           +   +     
Sbjct: 419 RLKNVLDEKFAKITYTNVIDLLLPYSEKFEVPVK----WGMDLQSEHERFVAEQIFKKPV 474

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            I+  YP    A       D +     ++    I       +  D      R +K + EK
Sbjct: 475 -IVYNYPKDLKAFYMKLNEDQKTVAAMDVLVPKIGEVIGGSQREDN---LERLDKMILEK 530

Query: 296 KKIYNETYPIDEDF--LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           K +  E+Y     +  L         +G  +GF+RL+MLVTG +NI + I  P 
Sbjct: 531 K-LNMESY---WWYRQLRKF-GSHPHAGFGLGFERLIMLVTGVDNIKDTIPFPR 579


>gi|313158498|gb|EFR57892.1| asparagine--tRNA ligase [Alistipes sp. HGB5]
          Length = 462

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 109/359 (30%), Gaps = 47/359 (13%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            + R R       L  R+ +  ++ EYF    F    +  +  S           T L +
Sbjct: 121 AYLRPRTNTFGAVLRIRHAMAYAIHEYFNREGFYYFHTPLITASDCEGAGAMFQVTTLDL 180

Query: 69  QD---------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            D            +  +     L  S +   +    +   +I+ F   +R        H
Sbjct: 181 NDVPKNEQGQVDFSQDFFGKACNLTVSGQLEGELGALS-LGRIYTFGPTFRAENSNTPRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    E  M+   + ++     A          +    ++     + + 
Sbjct: 240 ASEFWMIEPEAAFYELEDNMELAEDFLKYLIRYA----LDNCAEDLEFMNKMWDNGLLDR 295

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
                  D         + D        + +G +      W  D+ S      +E +   
Sbjct: 296 LHFVLENDF-------KRLDYTEGIEILKASGRKFEFPCDWGCDLQSEHERYLVEEH--F 346

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKE 291
               IL  YP    A       D +  +  ++    I E+    +   D  +   R  + 
Sbjct: 347 KRPVILINYPKDIKAFYMKQNDDGKTVRAMDVLFPGIGEIIGGSEREADYGKLHARVAEL 406

Query: 292 -MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            M EK+            +L          SG  +GFDRL++ VTG  NI +V   P +
Sbjct: 407 GMNEKEL---------WWYLDTRRWGSAPHSGFGLGFDRLLLFVTGMTNIRDVQPFPRT 456


>gi|148979117|ref|ZP_01815325.1| asparaginyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145961983|gb|EDK27272.1| asparaginyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 466

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTEKGDVDYNEDFFGKETFLTVSGQLNGEAYACA-LSKVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    E + K   ++++   +   ++             + E IT  
Sbjct: 242 RHLAEFWMVEPEVAFADLEDIAKLSEDMLKFVFKAVLEECRDDLEFFAQRIDK-EAITRL 300

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D          +G        W    S      +     
Sbjct: 301 EQF----------VTSDFAQVDYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKNIKAFYMRANDDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DERMREVGIDPEHMNWYRDLRK-YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|300175294|emb|CBK20605.2| unnamed protein product [Blastocystis hominis]
          Length = 393

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 106/363 (29%), Gaps = 44/363 (12%)

Query: 15  HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R  L       RN +  S+      N FI++ +  +  +       +  FS  L  
Sbjct: 40  HIRPRSNLQGVVNRMRNTMIQSVHHTLQSNDFIQVMTPIMTSNDCEGAGEL--FSVALAS 97

Query: 69  QD------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLE 121
            +            +L  S +   +  +A    +++ FA  +R        H  EF M+E
Sbjct: 98  SNQIDLNAFFNSRAFLTVSGQLQAEM-MAHAMTRVYSFAPTFRAENSNTSRHLCEFWMIE 156

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE--PEYITVAEAFARYAN 179
                     LM     +I   A+    K         +   +  PE +        Y +
Sbjct: 157 PEMCFVQLPDLMDLAKKVIMDVAKNLEGKHGEDFRFLESRVDKTVPELVQTLREEKNYCH 216

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +     +D               + G +      W           +      N    L 
Sbjct: 217 LTYTEAID------------ILTRKGQKFEVPVKWGIDLQSEHERYLCEKYCGNKPLFLT 264

Query: 240 RYPAPESALANIYPADPRFTKRFEL-----YACNIELCNACDELLD---PIEQRHRFEKE 291
            YPA           D +  +  +L             +   E++      +Q    ++ 
Sbjct: 265 HYPAEIKPFYMKDSGDGKTVEAMDLLVPRVVCFGWIRSDVQGEIVGGSMREDQYDVLKRR 324

Query: 292 MQEKKKIYNE------TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           M+EK  +  E      T  +D              G  +G +RL+   TG  NI +VI  
Sbjct: 325 MEEKGLLSEEVESGRSTKALDWYLDLRRYGSVPHGGWGLGLERLIETFTGVQNIRDVIPV 384

Query: 346 PFS 348
           P  
Sbjct: 385 PRV 387


>gi|82596106|ref|XP_726125.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23481400|gb|EAA17690.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 576

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 68/408 (16%), Positives = 107/408 (26%), Gaps = 90/408 (22%)

Query: 3   QIPSQPWW---NRDF-HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +       R+  H R R       +  RN +  S   +F    FI I +  +  S 
Sbjct: 189 PLSKKNHGKEFLREVAHLRPRSYFISSVMRIRNALMLSTHLFFQSRGFICIQTPLITTSD 248

Query: 53  --PGNETHIRAFSTEL-------------------------------------------- 66
              G E     F+                                               
Sbjct: 249 CEGGGEM----FTVTTLFNEEGDINSIPKTKKKINNNQIVKREDQNTNELETNNNTNQYI 304

Query: 67  --IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWY 123
               +D   K  +L  S + S +  L +    ++ F   +R        H  EF M+E  
Sbjct: 305 VDFKKDFFSKQAFLTVSGQLSLEN-LCSSMGDVYTFGPTFRAENSHTSRHLAEFWMIEPE 363

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A       M+     I+                          I   E       ID  
Sbjct: 364 MAFADIYDNMEVAEAYIKYCIRYVLNNN-------------FHDIYYFEENVEKGLIDRL 410

Query: 184 TTL--DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             +  DN  +           +          W           I   +      I+  Y
Sbjct: 411 KNILNDNFAKITYTNAIDLLTKYSNNFEVPIKWGMDLQSEHERFISEQIFKKPV-IVYNY 469

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P    A       D +     ++    I       +  D +E   +   E    KK+  E
Sbjct: 470 PKDLKAFYMKLNDDNKTVAAMDVLVPKIGEVIGGSQREDNLELLDKMINE----KKLNIE 525

Query: 302 TYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +Y     +   L        SG  +GF+RL+MLVTG +NI + I  P 
Sbjct: 526 SY----WWYRQLRKYGTHPHSGFGLGFERLIMLVTGVDNIKDTIPFPR 569


>gi|325474986|gb|EGC78172.1| tRNA synthetase [Treponema denticola F0402]
          Length = 311

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 19/296 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD-----HIRK 74
             L  R +   + RE+F++  ++E+D+ +L      ET +  F TE +        H  K
Sbjct: 4   EALELRALSIQAAREFFIKKNYLELDTPALSGELIPETCLEVFKTEYLSPSLSKDTHQGK 63

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLM 133
            L+L  SPE   K ++A     +F  +  +RN    G +H PEFTMLE+Y  + +Y+  +
Sbjct: 64  ALFLVPSPEVYIKPIIAQTSRSVFQISKCYRNAESIGNIHSPEFTMLEYYTVNANYKDSV 123

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           K     +   ++   +       V        + +T+ EAF +YA + L T     +   
Sbjct: 124 KISEEFLTHVSDRVKENPLVDGEVLKILSKGFDCLTMDEAFRKYAGVPLSTEHSPEELAY 183

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
                   +        D    D++  IL+  +EPNL  N    L  YPA    LA    
Sbjct: 184 YAENLGLGEA---ENYSDWKEDDLYELILVHAVEPNLPKNKLIALLDYPAFVPCLAAENS 240

Query: 254 AD----------PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                        +  +R+E+Y   +EL N   E  D  +    F+ E + K+K  
Sbjct: 241 EKVFNKKNEVLEWKTVERWEVYLNGVELANCYTEERDKNKINSYFKNENELKQKND 296


>gi|229515672|ref|ZP_04405131.1| asparaginyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229347441|gb|EEO12401.1| asparaginyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 356

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 107/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +   ST  +
Sbjct: 15  AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDM 74

Query: 68  IQ-------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                          D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 75  ENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAIS-KVYTFGPTFRAENSNTSRH 133

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A      + K   ++++   +    +    +  +   F++     V   
Sbjct: 134 LAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVIAR 189

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++   D           D        +  G        W    +      +       
Sbjct: 190 LEQFVESDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHFKA 242

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 243 PVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDILDA 295

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + ++   +  +    D+   L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 296 RMREFGIDPEHM---DWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 350


>gi|269961689|ref|ZP_06176050.1| asparaginyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833554|gb|EEZ87652.1| asparaginyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 472

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 131 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 188

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 189 DMENLPRTEEGKVDYNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTS 247

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    + + K   ++++   +    +             + E IT  
Sbjct: 248 RHLAEFWMVEPEVAFAELDDVAKLAEDMLKFVFKAVLAECRDDLEFFAQRIDK-EAITRL 306

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D          +G        W    S      +     
Sbjct: 307 EQF----------VSSDFAQVDYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHF 356

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 357 KAPVIVK-NYPKDIKAFYMRANDDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 409

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 410 DARMREVGIDPEHMSWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 466


>gi|116618476|ref|YP_818847.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116097323|gb|ABJ62474.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 435

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/347 (16%), Positives = 99/347 (28%), Gaps = 42/347 (12%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +    H +    L  RN + ++  E+F +  F ++D+  L   +P         +T
Sbjct: 121 ERHLYL--RHLKPFATLKIRNTLVAATYEFFNKEGFTKLDAPVLTGSAPEG-------TT 171

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           EL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E  
Sbjct: 172 ELFETDYFGEPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIEPE 230

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A    E+ +K     I                           +   +        D G
Sbjct: 231 MAFMDQEESLKLQERYIAFLISKV--------------------LENNDQELDILKRDKG 270

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                   P   + Y  A +       D  W   F       +  +        +  +P 
Sbjct: 271 LLRSYTQLPYPRVSYDDAVKLLQDNDFDVEWGVDFGSPEETFLANHFA--KPVFIVNFPK 328

Query: 244 PESALANI--YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
                        D        L            E     +      +  +    +   
Sbjct: 329 AIKPFYMKRHKTRDDIVVSADLLAPEGYGEIIGGSERDTDYDYLK--NEIEKLGLNMDEY 386

Query: 302 TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + +D   L         SG  +G +R+V  VTG  +I E I  P  
Sbjct: 387 AWYLD---LRK-YGSVPHSGFGLGLERMVTFVTGEEHIREAIPFPRM 429


>gi|297566450|ref|YP_003685422.1| asparaginyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850899|gb|ADH63914.1| asparaginyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 441

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/347 (17%), Positives = 114/347 (32%), Gaps = 29/347 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  + R    R    L  R+ ++ ++ ++F E  F+ +D+  L  +    T    F 
Sbjct: 116 MDHRHLYLRHR--RPWAVLRIRDELERAIHDFFGERGFVRMDAPILTPNAVEGTT-DLFE 172

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +L       +  YL  S +   +    A   K++ F   +R        H  EF M+E 
Sbjct: 173 VDLFD----GEKAYLSQSGQLYAEAGAMA-FGKVYTFGPTFRAERSKTRRHLLEFWMIEP 227

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A  ++E+ M+    ++        ++    +            +    A   Y  I  
Sbjct: 228 EVAFMTHEENMQLQEELVAYLVGRVLEE----KKRELEILERDTTVLQTTAQGNYPRIHY 283

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              +         ++   AQ+          W D F       +      +    +++YP
Sbjct: 284 TQAV--------EMVNKIAQERPELELAPMQWGDDFGAPHEAAL--TGQFDRPIFVEKYP 333

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P DPR     +L            E++   ++ H  E  +Q+ ++    
Sbjct: 334 AAVKAFYMEPDPEDPRLVLNADL-----LAPEGVGEIIGGSQRIHDPELLLQKIREHGLP 388

Query: 302 TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D      L      SG  +G +R V  + G  +I E I  P  
Sbjct: 389 EEVFDWYMDLRLFGTVPHSGFGIGLERTVRWICGIEHIREAIPFPRM 435


>gi|260663057|ref|ZP_05863950.1| asparaginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260552678|gb|EEX25678.1| asparaginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 431

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 110/351 (31%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    + +  +  R+ +  +  E+F E+ F +ID   L   +P         
Sbjct: 115 LDHRHLWLRSS--KPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +   ++  A    +++ F   +R  +     H  EF M+E
Sbjct: 166 TTDLFHTEYFDQDAYLSQSGQLY-EEAGAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      I            D
Sbjct: 225 PEMAFMHQEESLELQEQYVAYLIQKV--------------------IDDCSRELEVLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             T       P   + Y +A +   +   D  W + F       +      +    +  Y
Sbjct: 265 PETLKPFTQLPYPRISYDEAIEMLQKAGMDIKWGEDFGSPEETYLADQ--FSKPVFVLNY 322

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCN-ACDELLDPIEQRHRFE--KEMQEKKKI 298
           P                  R ++Y C   L      E++   E+   +E  ++      +
Sbjct: 323 PKAIKPFYMK-----GHPTRDDVYVCADLLAPEGYGEIIGGSERETDYETLRQAIADAGL 377

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + Y     +L          SG  +G +R +  +   +++ E I  P  
Sbjct: 378 DEKDYQ---WYLDLRKYGSVPHSGYGLGLERFLTWIALQDHVRETIPFPRL 425


>gi|294660329|ref|NP_853021.2| asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286867|sp|Q7NBM9|SYN_MYCGA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|284811986|gb|AAP56589.2| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930499|gb|ADC30438.1| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 456

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/345 (15%), Positives = 106/345 (30%), Gaps = 29/345 (8%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST-EL 66
            H R R       +  R+ + ++  E+F  N F+ + +  +  +         +F     
Sbjct: 123 AHLRVRTNKFYVIMKIRSELANAFFEFFKNNDFLYVHAPLITSNDSEGAGE--SFEVISP 180

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRA 125
              ++  K   L  S +F+ +       +++F F   +R  +     H  EF M+E   +
Sbjct: 181 NDPNYFGKKASLTVSGQFAAEAYAQG-FKRVFTFGPTFRAEKSHTSKHLSEFWMIEPEVS 239

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               ++L       ++ A        F +        +E     + +      N D    
Sbjct: 240 LMDLDKLTILIEQCVKHAIYYL----FDYAKPELEWCNENLEPGLIDKLNNVINNDFPRV 295

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                         +  +  ++   D  +           I           +  YP   
Sbjct: 296 EYREVIEILKKAVAEGVEFEVK---DIHFGMDLKSEHERYICEK-VFKRPVFVINYPKDV 351

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
            A       D +     +L A  I       +  D   +      E+    +  N  + +
Sbjct: 352 KAFYMKLNDDNQTVAATDLLAPGIGEICGGSQREDSYNKLLTRCLELDIDPEFNNLQWYL 411

Query: 306 D---EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           D     +          +G  +GF+RL+M VTG +NI + I  P 
Sbjct: 412 DLRKYGYYRS-------AGFGLGFERLLMYVTGCDNIRDAIPFPR 449


>gi|145238062|ref|XP_001391678.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134076157|emb|CAK48970.1| unnamed protein product [Aspergillus niger]
          Length = 559

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 106/322 (32%), Gaps = 32/322 (9%)

Query: 34  EYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
           EY +++    I +  L  +   E     F  +   ++      YL  SP+   +  +A  
Sbjct: 257 EYMIKSGSRWIFTPKLVGAA-TEGGSNVFEVKYFKKNA-----YLAQSPQLYKQMCIAGD 310

Query: 94  EEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
            E +F  A  +R  +     H  EF  L++ +    +   + +    +        ++ +
Sbjct: 311 MESVFEIAPVFRAEDSNTHRHLTEFAGLDFEKTFRGHYHEVLEFAENLLVFILSQLKERY 370

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
           + +                      A            + +        ++AG+ V+  +
Sbjct: 371 ADKIAIIQKSYP------------KAGDFKLPKDGKALRLNYMDGVAMLKEAGVDVSEQE 418

Query: 213 TWSDIF----SRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYAC 267
            + + F     + L + I      +   +LD++P           P DPRF+  ++ +  
Sbjct: 419 RFENDFTTAMEKQLGQIIRDKYDTD-FYVLDKFPMAVRPFYTKACPQDPRFSNSYDFFMR 477

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+ +    + D  E             K  N      ED+L+      P  +G  +G 
Sbjct: 478 GEEIMSGAQRINDIKELEESMV------AKGLNPNQEGFEDYLSAFRQGCPPHAGGGLGL 531

Query: 327 DRLVMLVTGANNINEVIWTPFS 348
           +R+VM   G  N+      P  
Sbjct: 532 NRIVMFFLGLPNVRLASLFPRD 553


>gi|256847329|ref|ZP_05552775.1| asparaginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715993|gb|EEU30968.1| asparaginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 432

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 112/349 (32%), Gaps = 42/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF 62
           +  +  W R    +    +  R+ ++ S  E+F ++ F + D+  L  S P         
Sbjct: 116 LDHRHLWLRSR--KPWALMRIRSQVKLSTMEFFDKHGFTQFDAPILTSSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +  YL  S +    +  A    +I+     +R  +     H  EF M+E
Sbjct: 167 TTELFNVDYFDEDAYLSQSGQLY-GEAGAMALGRIYTMGPTFRAEKSKTRRHMTEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+  +     +    +    K  +                            
Sbjct: 226 PEMAWCHEEESEEIQEQYVAYLIQDLIDKCPTE--------------------LEMVGRS 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + +     + P   + Y +A +   +   D  + D F       +      N    +  Y
Sbjct: 266 VESLKPFTELPYPRITYKEAIEMLQKGGMDVKYGDDFGAPEETFLADQ--FNKPVFIKNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P    A       DP   +  ++   ++       E++   E+ + +E    + ++    
Sbjct: 324 PRSIKAFYMP--TDPEDAQ--QVICADLLAPEGYGEIIGGSERSYDYEYITSKLEENGLS 379

Query: 302 TYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               D  +   L        SG  MG +R +  VT  ++I E I  P  
Sbjct: 380 KE--DYGWYDDLRKYGSVPHSGFGMGLERFLSWVTLQDHIRENIPFPRM 426


>gi|290559652|gb|EFD92979.1| asparaginyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 428

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 111/349 (31%), Gaps = 46/349 (13%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFS 63
           ++  W R    +    +  R+ + SS+ E+F    F EI S S       G  T    F 
Sbjct: 114 NRHLWIRS--PKTTAIMKIRSTVFSSIHEFFSSMNFYEIQSPSFVGGSVEGGATL---FE 168

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T+     +  +  YL  S +    + +     KI+  A ++R  +     H  EF   E 
Sbjct: 169 TQ-----YFNRKAYLTQSWQLYA-EAMVDSLWKIYTVAPSFRAEKSRTWRHLTEFWHAEA 222

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A ++ + +M     +I+   +    K                     +   R   I  
Sbjct: 223 EVAFKTNDDVMDLEEKLIKFVIKNVLSKNE----------------DDLKVINRDTKILE 266

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            T      +     +   A + G+++ +         R++         ++       YP
Sbjct: 267 NTVSKPFLRMKYEEVIDLANRNGLKLEYGADLGADEERVI------TSKLDVPIFSIDYP 320

Query: 243 APESALAN-IYPADPRFTKRFELY--ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                  +   P DP+     +L       E+      + D      R ++E   K    
Sbjct: 321 IELKPFYHKPNPKDPKHVLCNDLLAPEGYGEIIGGGQRVDDKETLLKRLKEE---KLNEK 377

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  + ID             SG  +G DRLVM +    +I   +  P +
Sbjct: 378 DYEWYIDLR----RYGAIPHSGFGLGVDRLVMWICKLPHIMYGVPFPRT 422


>gi|290558908|gb|EFD92297.1| asparaginyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 428

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 111/349 (31%), Gaps = 46/349 (13%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFS 63
           ++  W R    +    +  R+ + SS+ E+F    F EI S S       G  T    F 
Sbjct: 114 NRHLWIRS--PKTTAIMKIRSTVFSSIHEFFSSMNFYEIQSPSFVGGSVEGGATL---FE 168

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T+     +  +  YL  S +    + +     KI+  A ++R  +     H  EF   E 
Sbjct: 169 TQ-----YFNRKAYLTQSWQLYA-EAMVDSLWKIYTVAPSFRAEKSRTWRHLTEFWHAEA 222

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A ++ + +M     +I+   +    K                     +   R   I  
Sbjct: 223 EVAFKTNDDVMDLEEKLIKFVIKNVLSKNE----------------DDLKVINRDTKILE 266

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
            T      +     +   A + G+++ +         R++         ++       YP
Sbjct: 267 NTVSKPFLRMKYEEVIDLANRNGLKLEYGADLGADEERVI------TSKLDVPIFSIDYP 320

Query: 243 APESALAN-IYPADPRFTKRFELY--ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                  +   P DP+     +L       E+      + D      R ++E   K    
Sbjct: 321 IELKPFYHKPNPKDPKHVLCNDLLAPEGYGEIIGGGQRVDDKETLLKRLKEE---KLNEK 377

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  + ID             SG  +G DRLVM +    +I   +  P +
Sbjct: 378 DYEWYIDLR----RYGAIPHSGFGLGVDRLVMWICKLPHIMYGVPFPRT 422


>gi|259502149|ref|ZP_05745051.1| asparagine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169767|gb|EEW54262.1| asparagine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 432

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 106/349 (30%), Gaps = 42/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    +    +  R+ ++ +  E+F ++ F + D+  L   +P         
Sbjct: 116 LDHRHLWLRSR--KPWALMRIRSRVKLATMEFFNKHGFTQFDAPILTGSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +  YL  S +    +  A    +I+     +R  +     H  EF M+E
Sbjct: 167 TTELFETDYFDQSAYLSQSGQLY-GEAGAMALGRIYTMGPTFRAEKSKTRRHLMEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++  +     +    +                      I             
Sbjct: 226 PEMAWMHEDENEEIQEQYVAYLIQDL--------------------IDHCPLELEMVGRS 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + +     + P   + Y +A +       D  + D F       +           +  Y
Sbjct: 266 VESLKPFTELPYPRVTYKEAIKMLQDGGLDVKYGDDFGSPEETYLADQ--FKKPVFIKNY 323

Query: 242 PAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    A      P D R     +L            E++   E+ + +E    + ++   
Sbjct: 324 PKEIKAFYMPTNPEDDREVICADL-----LAPEGYGEIIGGSERAYDYEYITSKLEENGL 378

Query: 301 ETYPIDE-DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   D L         SG  MG +R +  VT  ++I E I  P  
Sbjct: 379 SKENYGWYDDLRK-YGSVPHSGFGMGLERFLAWVTLQDHIRENIPFPRM 426


>gi|164663385|ref|XP_001732814.1| hypothetical protein MGL_0589 [Malassezia globosa CBS 7966]
 gi|159106717|gb|EDP45600.1| hypothetical protein MGL_0589 [Malassezia globosa CBS 7966]
          Length = 995

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 54/323 (16%), Positives = 102/323 (31%), Gaps = 28/323 (8%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           ++I    R+Y  +++FIEI +  LQ    +E+    F        +  +  +L  SP+  
Sbjct: 334 SVICREFRQYLSQHEFIEIHTPKLQG-GASESGASVFDVA-----YFGRSAFLAQSPQLY 387

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
            +  +AA   ++F     +R        H  E+T L+       Y   M     +++   
Sbjct: 388 KQMCIAADMRRVFEIGPVFRAENSNTARHLTEYTGLDLEMEINHYYDAMSLIDRMLKHIF 447

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
            V   K                 +   E          G  L   D          +   
Sbjct: 448 TVLRDKY-GHVTQFIRRHYPSTELQWLEQTL-VLPFWEGIRLLKEDGYREEDGSEPSPFE 505

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-IYPADPRFTKRFE 263
            +    +    +I  R+               ILD++P             D R+T  F+
Sbjct: 506 DLATRGEIRLGEIVKRLYG---------TDYYILDKFPRNARPFYTLPDQNDERYTNSFD 556

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           ++    E+C     +           ++   +  +   +    ED+L       P  +G 
Sbjct: 557 IFLRGQEICTGGQRIHHAQML-----EDNISRLHMDASSL---EDYLEGFRLGAPPHAGC 608

Query: 323 AMGFDRLVMLVTGANNINEVIWT 345
            +G +RLVML    ++I      
Sbjct: 609 GLGLERLVMLYLNLDDIRLASLF 631


>gi|319787278|ref|YP_004146753.1| asparaginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465790|gb|ADV27522.1| asparaginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 466

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 104/357 (29%), Gaps = 45/357 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R  L       R+ +  ++  +F E  F  I +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLFGAVTRIRHCLAQAVHRFFHERGFYWISTPIITTSDAEGAGQMFRVSTLDL 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ANLPRTKDGEVDFSRDFFGKETFLTVSGQLNVEAYALA-LSKVYTFGPTFRAENSNTTRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A            + ++        +             + + IT  E+
Sbjct: 244 LAEFWMIEPEIAFADLAADADLAEDFLKYLFRTVLDERADDMAFIAERVQK-DAITRLES 302

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGI 232
           F               ++ D        Q +G +      W  D+ +       E ++G 
Sbjct: 303 F----------INAPFERIDYSEAIRLLQASGRKFDFPVEWGLDLQTEHERWLTEEHVG- 351

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               ++  YP    A       D +             L     E++   ++  R +   
Sbjct: 352 -RPVVVMNYPEHIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLD 404

Query: 293 QEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               +   E           L        +G  +GF+RLV+   G +NI + I  P 
Sbjct: 405 ARMAQFGLEPEHYQW--YRDLRRYGGVPHAGFGLGFERLVVYTCGLSNIRDAIAYPR 459


>gi|225552442|ref|ZP_03773382.1| asparaginyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371440|gb|EEH00870.1| asparaginyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 462

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 101/358 (28%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QDHIR--------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + +               K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKLNNAPSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +     
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                ++  YP    A       D +  K  ++    I E+    +   D  +  +R ++
Sbjct: 347 KKPV-VVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSEREDDLQKLENRIKE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + ID   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 406 LNLNIEHLN---WYID---LRRF-GSAPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 456


>gi|255731806|ref|XP_002550827.1| hypothetical protein CTRG_05125 [Candida tropicalis MYA-3404]
 gi|240131836|gb|EER31395.1| hypothetical protein CTRG_05125 [Candida tropicalis MYA-3404]
          Length = 483

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 102/353 (28%), Gaps = 30/353 (8%)

Query: 11  NRDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI 67
             +  +R      FL  R+ ++  L E+F +  FI++ +  L  S   E     FS    
Sbjct: 138 FPELKHRTNTLASFLRLRSHMEFKLMEFFQQQDFIKV-TPPLITSSDCEGAGEVFSVHSA 196

Query: 68  I----QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
                +    K  YL  S +    + LA    + +     +R  +     H  EF MLE 
Sbjct: 197 SDKPNEKFFGKNAYLTVSTQLHL-ECLALALNRAWTLTPCFRAEQSNTTRHLSEFWMLEA 255

Query: 123 YRAHES-YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
             +H     Q+     +++R   +            N +     +Y+  +          
Sbjct: 256 EISHVDSVHQVTNFIEDMVRYVTQSLMDSSSESSVNNISAGDGNDYLNGSYIDKELVKER 315

Query: 182 LGTTLDNPDQPDRHLLYLQ-AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
               L     P              +       W D         +  N  I     +  
Sbjct: 316 WAKMLTPDRWPRMTYTDAVSLLNKTLPENEQLQWGDSLQLKHERMLAENSPI----FITD 371

Query: 241 YPAPESALANIY-----PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           YP+ +     I      P  P       L     EL        D    +   E    + 
Sbjct: 372 YPSAQKPFYMIKSANFDPEKPTVACFDLLVPEFGELAGGSLREHDYEVLKKNLEDHQMDM 431

Query: 296 KKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + +          +L           G  +GF+R++  + G +N+ +V   P 
Sbjct: 432 QDMD--------WYLNLRRQGTVPHGGFGLGFERMITFLAGYDNVRDVSAFPR 476


>gi|307128652|ref|YP_003880682.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306483114|gb|ADM89984.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 463

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 98/345 (28%), Gaps = 43/345 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ----------- 69
            +  R+ I  S+ ++F +  F  I++  +  +   E     F                  
Sbjct: 137 IMRIRHHIAFSIHKFFYKKNFFYINTPIIT-TYDTEGAGDMFKVTTFNFKKIPINELGEI 195

Query: 70  ----DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
               D      YL  S +    +  A+G  KI+ F   +R  +     H  EF M+E   
Sbjct: 196 NNTLDFFGDFTYLTVSGQL-QGEAAASGLGKIYTFGPTFRAEKSNTFRHLSEFWMIEPEM 254

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A       M    N+++        K       +   F E + I                
Sbjct: 255 AFYKLNHNMILAENLLKYVI-----KYVIKHCYDDLFFLEKKNINRL----------YSI 299

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
              +  +          + +  +      W         + +  +   NC  I+  YP  
Sbjct: 300 LNSSFQRISYTNAIKIIKSSKYKFFFPVKWGTDLQSEHEKFLSEHYFHNCPIIIYNYPLR 359

Query: 245 ESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                     D +     ++   NI E+               R  +     K +     
Sbjct: 360 IKPFYMRLNDDNQTVAAMDVIFPNIGEIIGGSQREERYNFLLKRMIELNLNIKSL----- 414

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                +L          SG  +GF+RL+  +T  NNI + I  P 
Sbjct: 415 ---WWYLNIRRFGSVPHSGFGLGFERLIQFITNINNIKDNIPFPR 456


>gi|308463696|ref|XP_003094120.1| CRE-NARS-1 protein [Caenorhabditis remanei]
 gi|308248532|gb|EFO92484.1| CRE-NARS-1 protein [Caenorhabditis remanei]
          Length = 545

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 58/352 (16%), Positives = 119/352 (33%), Gaps = 45/352 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
            + ++    R  +  R   L  R     ++R++F    + E+   +L      G  T   
Sbjct: 225 MLDNRHLVIRGENASR--ILRIRAAATRAMRDHFFAAGYTEVTPPTLVQTQVEGGST--- 279

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   D+  +P YL  S +    +   A    ++C A ++R  +     H  E+  
Sbjct: 280 -----LFGLDYYGEPAYLTQSSQLYL-ETCNAALGDVYCIAQSYRAEKSRTRRHLSEYQH 333

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   A  +++QLM    +++    +       +   +    F  P Y   +  F R A 
Sbjct: 334 VEAECAFITFDQLMDRIESLVCDTVDRLLADPVTKGLIE---FVNPGYKPPSRPFKRMAY 390

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            +    L   D  + H                  + +  +     K+   +G+    +L+
Sbjct: 391 KEAIAWLQENDVRNEH-------------GEKFVYGEDIAEAAERKMTDTIGV--PILLN 435

Query: 240 RYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKK 297
           R+PA   +        D   T+  +L    + E+      +    E    FE     +  
Sbjct: 436 RFPAGIKAFYMPRCADDKELTESVDLLMPGVGEIVGGSMRIWQESEMLAAFE-----RAG 490

Query: 298 IYNET--YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           I  +   + +D+             G  +G +R +  +T  ++I +V   P 
Sbjct: 491 IDPKNYFWYMDQR----KYGSVPHGGYGLGLERFICWLTDTHHIRDVCLYPR 538


>gi|227431883|ref|ZP_03913906.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352350|gb|EEJ42553.1| asparaginyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 435

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 55/347 (15%), Positives = 98/347 (28%), Gaps = 42/347 (12%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +    H +    L  RN + ++  E+F +  F ++D+  L   +P         +T
Sbjct: 121 ERHLYL--RHLKPFATLKIRNTLVAATYEFFNKEGFTKLDAPVLTGSAPEG-------TT 171

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           EL   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E  
Sbjct: 172 ELFETDYFGEPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIEPE 230

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A    E+ +K     I                           +   +        D  
Sbjct: 231 MAFMDQEESLKLQERYIAFLISKV--------------------LENNDQELDILKRDKD 270

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                   P   + Y  A +       D  W   F       +  +        +  +P 
Sbjct: 271 LLRSYTQLPYPRVSYDDAVKLLQDNDFDVEWGVDFGSPEETFLANHFA--KPVFIVNFPK 328

Query: 244 PESALANI--YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
                        D        L            E     +      +  +    +   
Sbjct: 329 AIKPFYMKRHKTRDDIVVSADLLAPEGYGEIIGGSERDTDYDYLK--NEIEKLGLNMDEY 386

Query: 302 TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + +D   L         SG  +G +R+V  VTG  +I E I  P  
Sbjct: 387 AWYLD---LRK-YGSVPHSGFGLGLERMVTFVTGEEHIREAIPFPRM 429


>gi|269102882|ref|ZP_06155579.1| asparaginyl-tRNA synthetase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268162780|gb|EEZ41276.1| asparaginyl-tRNA synthetase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 466

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 110/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------- 58
            H R R          RN +  ++  ++ E  F  + +  +  S      E         
Sbjct: 125 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGFFWMSAPLITASDCEGAGEMFRVSTLDL 184

Query: 59  IRAFSTE----LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T+       +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ANLPMTDKGDVDFDKDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + + K   ++++   +   ++    +  +   F++         
Sbjct: 244 LAEFWMVEPEVAFAELDDVAKLAEDMLKFVFKAVLEE----RRDDLEFFAQRIDKDAITR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ + D           D        Q +G +   D  W    S      +       
Sbjct: 300 LEQFVSSDFAQV-------DYTDAIKILQDSGRKFEFDVEWGIDMSSEHERFLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDILDA 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + ++   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 406 RMREMNIDPEHMNWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|291569064|dbj|BAI91336.1| lysyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 325

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 64/168 (38%), Gaps = 17/168 (10%)

Query: 3   QIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
             P   +   + +   R R                R+ I  S+R Y     F EI++  L
Sbjct: 152 PFPDSYYGINDPELCRRHREIDLVSNSTSLQRFKLRSRIIRSIRTYLWNAGFDEIETPVL 211

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G     R F T     + +   LYL+ + E   K+ +  G EK+F     +RN   
Sbjct: 212 QSIYGG-VATRPFITH---HNALDIDLYLRIATELFLKRAVCGGMEKVFEIGRVFRNEGI 267

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
              H PEFT +E Y+A+  Y Q+M    ++I   A       F  +  
Sbjct: 268 DSTHNPEFTSIEVYQAYADYFQIMALVEDLICAVATTGAVTPFQIKAW 315


>gi|229822645|ref|YP_002884171.1| tRNA synthetase class II (D K and N) [Beutenbergia cavernae DSM
           12333]
 gi|229568558|gb|ACQ82409.1| tRNA synthetase class II (D K and N) [Beutenbergia cavernae DSM
           12333]
          Length = 437

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 57/337 (16%), Positives = 97/337 (28%), Gaps = 41/337 (12%)

Query: 18  RRPFLLKRNMIQSS----LREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
           R P +  R  I ++     R Y     F E+ S  L  +   E+    F       D+  
Sbjct: 130 RHPVMRARWEIAAASLKGFRSYLDARAFTEVRSPKLVATA-TESGANVFGV-----DYFG 183

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQL 132
           +P YL  SP+F  ++ L    E+++     +R        H  E+T L+         + 
Sbjct: 184 RPAYLAQSPQFYKQQ-LVGVFERVYEVGPVFRAEPHDTVRHLAEYTSLDVELGFIEGHRD 242

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                  +      A   +        +   E   +T+    A    I     L      
Sbjct: 243 -------VLAVLRGALASMVDAVRSTASDAVELLGLTLPAIPAEVPVIHFAEALARVGAA 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                     +  +     D        +    +              +P          
Sbjct: 296 PDEPDLAPEHERALGEWARDELGSDVLAVEGYPM-------RKRPFYTHP-----WTGAE 343

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           P  P ++  F+L    +EL      L        R    +   +    E       +L+ 
Sbjct: 344 PGGP-WSNSFDLIFRGVELVTGGQRLH-------RHADYLTAIRARGEEPSEY-RHYLSA 394

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               MP   G A+G +R V  + GA N+ EV   P  
Sbjct: 395 FEHGMPPHGGFAIGLERWVSRLVGAANVREVTLFPRD 431


>gi|195941839|ref|ZP_03087221.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 80a]
          Length = 462

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 101/358 (28%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QDHIR--------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + +               K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKLNNAPSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +     
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIEILENSKKNFEIKPCWGIDLQTDHERYLTEETF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                ++  YP    A       D +  K  ++    I E+    +   D  +  +R ++
Sbjct: 347 KKPV-VVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSEREDDLQKLENRIKE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 406 LNLNIEHLN---WYLD---LRRF-GSAPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 456


>gi|51598364|ref|YP_072552.1| asparaginyl-tRNA synthetase [Borrelia garinii PBi]
 gi|59798512|sp|Q662R1|SYN_BORGA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|51572935|gb|AAU06960.1| asparaginyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 462

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 98/357 (27%), Gaps = 42/357 (11%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QD--------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            +                 K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKPNNSLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNISLAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +   + 
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIEILESSKKNFEIKPCWGIDLQTDHERYLTEEIF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                ++D     ++    I   +        L     E+    +   D  +  +R ++ 
Sbjct: 347 KKPIAVIDYPKNFKAFYMKINKDNKTVKGMDILVPRIGEIIGGSEREDDLQKLENRIKEL 406

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 407 NLNIEHLN---WYLD---LRRF-GSTPHSGFGLGLERLVQYTTGISNIRDSIPFPRT 456


>gi|218249572|ref|YP_002374629.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226321988|ref|ZP_03797513.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|218164760|gb|ACK74821.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226232578|gb|EEH31332.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 462

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 101/358 (28%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARIRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QDHIR--------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + +               K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +     
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                ++  YP    A       D +  K  ++    I E+    +   D  +  +R ++
Sbjct: 347 KKPV-VVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSEREDDLQKLENRIKE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 406 LNLNIEHLN---WYLD---LRRF-GSAPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 456


>gi|326692528|ref|ZP_08229533.1| asparaginyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 439

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 102/349 (29%), Gaps = 46/349 (13%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +    H +    L  RN + ++  E+F    F+++DS  L   +P         +T
Sbjct: 125 ERHLYL--RHLKPFATLKIRNTLIAATYEFFNNEGFVKLDSPLLTGSAPEG-------TT 175

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           EL   D+  +  YL  + +   +    A   K+F F   +R  +     H  EF M+E  
Sbjct: 176 ELFETDYFGESAYLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMVEPE 234

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A    E+ ++     I        ++                     E        D  
Sbjct: 235 MAFMHQEESLELQERYISFLISKVLERN--------------------EQELDILGRDKS 274

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                 + P   + Y  A +       D  W   F       +  +        +  +P 
Sbjct: 275 LLASYTELPYPRISYDDAVKLLQDNGFDIEWGVDFGSPEETFLANHFA--RPVFIINFPK 332

Query: 244 PESALANIYP--ADPRFTKRFELYACNIELCNACDELLDPIEQRH-RFEKEMQEKKKIYN 300
              A         D        L            E     E    R E++      +  
Sbjct: 333 AIKAFYMKRHATRDDVVVSADLLAPEGYGEIIGGSERDTDYEYLKMRIEEQ-----GLDL 387

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E Y     +L          SG  +G +R+V  VTG  +I E I  P  
Sbjct: 388 EEYN---WYLDLRKFGSAPHSGFGLGLERMVTFVTGEEHIREAIPFPRM 433


>gi|302415325|ref|XP_003005494.1| asparaginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261354910|gb|EEY17338.1| asparaginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 506

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 66/404 (16%), Positives = 113/404 (27%), Gaps = 69/404 (17%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--- 52
           +  IP         H R R       L  R+   ++L  +F    F +     +  S   
Sbjct: 108 LRTIP---------HLRSRIPLNAAILRLRSDAVNALTRFFSSRDFTQTHPPIVTSSDCE 158

Query: 53  PGNETHIRAFSTELIIQDH---------------IRKPLYLQTSPEFSCKKLLAAGEEKI 97
            G E    +  T   + D                 R P YL  S +    + LA     +
Sbjct: 159 GGGEVFNVSVQTRESMADDTPEKKRGTKNTTDTFFRGPRYLTVSTQLHL-EALAQSVGNV 217

Query: 98  FCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNII-------RCAAEVANQ 149
           +  +  +R        H  EF MLE           + + +  +             A +
Sbjct: 218 WTLSPTFRAERSDTSRHMSEFYMLEAEMPFVDEMDDVLELVEDMLREVTTDMYRDRAATE 277

Query: 150 KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                 + N +  +E + ++  E   R+A +   +    P       + L  Q    R  
Sbjct: 278 LRERRVSSNASRTAEDDLVSADEVERRWAGMMHRSPARWPRIRYGDAITLL-QAEEHRFE 336

Query: 210 HDDTWSDIFSRILIEKIEPN------LGINCCTILDRYPAPESALANI------------ 251
           H  TW D       + +          G+     +  YP    A                
Sbjct: 337 HKPTWEDGLHSEHEKYLATTLGSTGENGMYQPVFVTHYPRDIKAFYMRPTATSAQTAGTK 396

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET-------YP 304
                   +R     C   L     E+     + HR     +  +     +         
Sbjct: 397 DDPYSGANERGATVDCFDLLVPDLCEIAGGSMREHRLADLQEAMQARGMVSSSGTPGFNG 456

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +D  +L           G  +GFDRL+  + G  NI +V+  P 
Sbjct: 457 LDW-YLDLRRWGSCPHGGFGLGFDRLLSYLAGVPNIRDVVAFPR 499


>gi|284931588|gb|ADC31526.1| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 456

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 107/345 (31%), Gaps = 29/345 (8%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST-EL 66
            H R R       +  R+ + ++  E+F  N F+ + +  +  +         +F     
Sbjct: 123 AHLRVRTNKFYVIMKIRSELANAFFEFFKNNDFLYVHAPLITSNDSEGAGE--SFEVISP 180

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRA 125
             Q++  K   L  S +F+ +       +++F F   +R  +     H  EF M+E   +
Sbjct: 181 NDQNYFGKKASLTVSGQFAAEAYAQG-FKRVFTFGPTFRAEKSHTSKHLSEFWMIEPEVS 239

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               ++L       ++ A        F +        +E     + +      N D    
Sbjct: 240 LMDLDKLTILIEQCVKHAIYYL----FDYAKPELEWCNENLEPGLIDKLNNVINNDFPRV 295

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                         +  +  ++   D  +           I           +  YP   
Sbjct: 296 EYREVIEILKKAVAEGVEFEVK---DIHFGMDLKSEHERYICEK-VFKRPVFVINYPKDV 351

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
            A       D +     +L A  I       +  D   +      E+    +  N  + +
Sbjct: 352 KAFYMKLNDDNQTVAATDLLAPGIGEICGGSQREDSYNKLLTRCLELDIDPEFNNLQWYL 411

Query: 306 D---EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           D     +          +G  +GF+RL+M VTG +NI + I  P 
Sbjct: 412 DLRKYGYYRS-------AGFGLGFERLLMYVTGCDNIRDAIPFPR 449


>gi|71984122|ref|NP_001021405.1| asparagiNyl tRNA Synthetase family member (nrs-1) [Caenorhabditis
           elegans]
 gi|2501037|sp|Q19722|SYNC_CAEEL RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|3876241|emb|CAA95808.1| C. elegans protein F22D6.3a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 545

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 107/352 (30%), Gaps = 45/352 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
            + ++    R  +  R   L  R     ++R++F    + E+   +L      G  T   
Sbjct: 225 MLDNRHLVIRGENASR--ILRIRAAATRAMRDHFFAAGYTEVAPPTLVQTQVEGGST--- 279

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   D+  +P YL  S +    +   A    ++C + ++R  +     H  E+  
Sbjct: 280 -----LFGLDYYGEPAYLTQSSQLYL-ETCNAALGDVYCISQSYRAEKSRTRRHLSEYQH 333

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   A  +++QLM     ++    +       +          E            +  
Sbjct: 334 VEAECAFITFDQLMDRIEALVCDTVDRLLADPVTK------SLIEFVNPGYKAPARPFKR 387

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +     ++   + D              +     + +  +     ++   +G+       
Sbjct: 388 MPYKEAIEWLQKNDVRN----------EMGEKFVYGEDIAEAAERRMTDTIGVPILLNRF 437

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +   ++        D   T+  +L    +         +   +Q       +   +K  
Sbjct: 438 PHGI-KAFYMPRCADDNELTESVDLLMPGVGEIVGGSMRIWKEDQL------LAAFEKGG 490

Query: 300 NET----YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++    + +D+             G  +G +R +  +T  N+I +V   P 
Sbjct: 491 LDSKNYYWYMDQR----KYGSVPHGGYGLGLERFICWLTDTNHIRDVCLYPR 538


>gi|312149258|gb|ADQ29329.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 462

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 101/358 (28%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QDHIR--------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + +               K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNITLAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +     
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                ++  YP    A       D +  K  ++    I E+    +   D  +  +R ++
Sbjct: 347 KKPV-VVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSEREDDLQKLENRIKE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 406 LNLNIEHLN---WYLD---LRRF-GSAPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 456


>gi|225549289|ref|ZP_03770262.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370147|gb|EEG99587.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 462

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 101/358 (28%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QDHIR--------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + +               K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKLNNTLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +     
Sbjct: 287 YIEKGLIKKLENVINSNFEIITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                ++  YP    A       D +  K  ++    I E+    +   D  +  +R ++
Sbjct: 347 KKPV-VVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSEREDDLQKLENRIKE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 406 LNLNIEHLN---WYLD---LRRF-GSAPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 456


>gi|315180018|gb|ADT86932.1| asparaginyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 466

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTDAGKVDYNEDFFGKETFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    + + K   ++++   +   ++             + E IT  
Sbjct: 242 RHLAEFWMVEPEVAFAELDDVAKLAEDMLKYVFKAVLEERRDDLEFFAQRIDK-EAITRL 300

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D          +G        W    S      +     
Sbjct: 301 EQF----------VASDFAQVDYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +  +   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DARMIEMGIDPEHMSWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|19111871|ref|NP_595079.1| mitochondrial asparagine-tRNA ligase Slm5 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74625260|sp|Q9P6I0|SYNM_SCHPO RecName: Full=Asparaginyl-tRNA synthetase, mitochondrial; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|7801317|emb|CAB91185.1| mitochondrial asparagine-tRNA ligase Slm5 (predicted)
           [Schizosaccharomyces pombe]
          Length = 441

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 104/361 (28%), Gaps = 59/361 (16%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNET 57
           + QIP      R    ++      R+    +LR++F    F E +   +  S      E 
Sbjct: 119 LRQIP----HLRLRTAKQGEIFRLRSDSLKALRQFFSSKDFTETNPPIITSSDCEGAGEV 174

Query: 58  H-IRAFSTELIIQDH-------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE- 108
             +    T                +P +L  S +    + LA G  +++  + A+R  + 
Sbjct: 175 FTLTPQETHKNKSFERDDQKHFFDRPAFLTVSTQLHL-EALALGLSRVYTISPAFRAEQS 233

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF MLE   A  +    +   M  +      +  +    ++         + +
Sbjct: 234 HTSRHLAEFWMLEAEVAFMTSLSQLTSLMEDMIKYTLNSLMEQNYHRDHWDQLLKPWKCM 293

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T +EA    + +                             +   W +  S    + +  
Sbjct: 294 TYSEAIEELSAVKKT------------------------WKYPPKWGNDLSSEHEKYLCE 329

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
            L       +  YP                     L     EL        D +++   +
Sbjct: 330 ILHKTPV-FVTDYPQKIKPFYMKSSGPDTVAAVDLLVPQVGELAGGSLRK-DHLDEYKTY 387

Query: 289 EKEMQEKKKIYNETYPID-EDFLACLTEMPQSSGIAMGFDRLVMLVTGAN-NINEVIWTP 346
             E+Q         + +D   +           G  +G +RL+  + G N N+ E I  P
Sbjct: 388 PPELQ---------WYLDLMKYSNA-----PHGGFGLGIERLIAFLEGENTNVKETIPFP 433

Query: 347 F 347
            
Sbjct: 434 R 434


>gi|260768310|ref|ZP_05877244.1| asparaginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260616340|gb|EEX41525.1| asparaginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 466

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 105/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 182

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 183 DMENLPRTDAGKVDYNEDFFGKETFLTVSGQLNAETYACA-LSKVYTFGPTFRAENSNTS 241

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    + + K   ++++   +   ++             + E IT  
Sbjct: 242 RHLAEFWMVEPEVAFAELDDVAKLAEDMLKYVFKAVLEERRDDLEFFAQRIDK-EAITRL 300

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D          +G        W    S      +     
Sbjct: 301 EQF----------VASDFAQVDYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 351 KAPVIVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 403

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + +  +   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 404 DARMIEMGIDPEHMSWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|169344439|ref|ZP_02865408.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169297359|gb|EDS79468.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 429

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 110/337 (32%), Gaps = 45/337 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N+I  S RE+  +  F EI +  +              TE+    +  
Sbjct: 122 RHKKINAIFKVQNIITDSFREFLNKEGFTEIHTPKIVK--EGAEGG----TEVFEVKYFE 175

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH----ES 128
              YL  SP+F  + ++ AG E++F   HA+R  E     H  E+  ++           
Sbjct: 176 NKAYLAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEMGFIENEFD 235

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
              L ++ +  I  +  +  ++                             ++L    + 
Sbjct: 236 IMNLEENLLKFILNSLRIKGKEYI-----------------------ELLQVELPVIYEE 272

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
             + + +      ++   +   D        ++L +  +  L  +    L  YP  +  +
Sbjct: 273 IPKIEFNEAIEILKEQYNKNDLDGDLDPEAEKLLYKYAKEKLNSD-FLFLTNYPRKKRPM 331

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             +   +   T  F+L    IE+      + D              K K  N      E 
Sbjct: 332 YTMPKGEKG-THSFDLLFRGIEITTGGQRIHDYEMLVE------NMKYKGLNPNSY--ES 382

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           +L      MP+  G+A+G +R+   + G  N+ E   
Sbjct: 383 YLELFKLGMPKHGGLAIGLERITARILGLENVREATL 419


>gi|254169005|ref|ZP_04875844.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622111|gb|EDY34687.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 430

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 107/349 (30%), Gaps = 43/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R         L  R+ +  ++ E+F EN + E+           E     F 
Sbjct: 115 LDNRHLWLRSREM--NAILKIRHTVFGAIHEFFRENGYYEVQGPIFVTGAV-EGGSTLFE 171

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
                  +  K  YL  S +F  +  + +  E+++  A ++R  +     H  E+   E 
Sbjct: 172 VP-----YFGKKAYLSQSAQFYLETFIFS-LERVYTIAPSFRAEKSRTRRHLTEYWHAEG 225

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    E +M+D   +I    +   ++                     E   ++ N D 
Sbjct: 226 EVAWYHNEDMMRDEEELIMHIVQKVLEE--------------------REKELKFLNRD- 264

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L + ++P   + Y +  +       +  + D         I      +    +  YP
Sbjct: 265 LEILKDLEKPFIRMKYDELIEFAQENGINIEYGDDLGADEETAITKK--FDKPIFVTHYP 322

Query: 243 APESALANIYPADPRF---TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                  +    D                 E+    + +        R E+     + + 
Sbjct: 323 IEIKPFYHRPDPDNPKVVLCHDLLAPEGYGEIIGGGERIYKLDVLLRRMEE-----EGLN 377

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y    D           SG  +G DRLV  + G ++I   I  P +
Sbjct: 378 PEDYYWYVDLRK--YGSIPHSGFGLGVDRLVWWLAGLSHIKYAIPYPRT 424


>gi|207347314|gb|EDZ73526.1| YCR024Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 492

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 111/356 (31%), Gaps = 32/356 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSL---REY--------FVENQFIEIDSMSLQYS---PGNETHI 59
            + R  P L  R    S++   R +        F +N F ++    L  +      E   
Sbjct: 135 RYLRSLPTLKYRTAYLSAILRLRSFVEFQFMLYFQKNHFTKVSPPILTSNDCEGAGELFQ 194

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFT 118
            + +T      +  KP YL  S +    ++LA    + +  +  +R  +     H  EF 
Sbjct: 195 VSTNTSPTASSYFGKPTYLTVSTQLHL-EILALSLSRCWTLSPCFRAEKSDTPRHLSEFW 253

Query: 119 MLEWYRAHESYEQLMKDCMN----IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           MLE      +    +   +      I  A     Q++   Q ++    +    +++ +  
Sbjct: 254 MLEVEMCFVNSVNELTSFVETTIKHIIKACIDNQQELLPKQFISSQENNASSELSINQET 313

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILIEKIEPNLG 231
            +          +              ++    V+H   +  W         + +     
Sbjct: 314 QQIKTRWEDLINEKWHNITYTNAIEILKKRHNEVSHFKYEPKWGQPLQTEHEKFLAGEYF 373

Query: 232 INCCTILDRYPAPESALANIYPADPRFTK-RFELYACNIELCNACDELLDPIEQRHRFEK 290
            +    +  YP           + P  T   F+L    +          D  ++  R   
Sbjct: 374 KSPV-FVTDYPRLCKPFYMKQNSTPDDTVGCFDLLVPGMGEIIGGSLREDDYDKLCR--- 429

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             + K +  N +  +D  +++          G  +GF+R +  + G +NI + I  
Sbjct: 430 --EMKARGMNRSGELDW-YVSLRKEGSAPHGGFGLGFERFISYLYGNHNIKDAIPF 482


>gi|223889109|ref|ZP_03623698.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224534013|ref|ZP_03674597.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|223885358|gb|EEF56459.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224512849|gb|EEF83216.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
          Length = 462

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 101/358 (28%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QDHIR--------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + +               K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +     
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                ++  YP    A       D +  K  ++    I E+    +   D  +  +R ++
Sbjct: 347 KKPV-VVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSEREDDLQKLENRIKE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 406 LNLNIEHLN---WYLD---LRRF-GSAPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 456


>gi|226320706|ref|ZP_03796264.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233922|gb|EEH32645.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 462

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 101/358 (28%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QDHIR--------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + +               K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +     
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                ++  YP    A       D +  K  ++    I E+    +   D  +  +R ++
Sbjct: 347 KKPV-VVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSEREDDLQKLENRIKE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 406 LNLNIEHLN---WYLD---LRRF-GSAPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 456


>gi|221217364|ref|ZP_03588835.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192642|gb|EEE18858.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 462

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 101/358 (28%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QDHIR--------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + +               K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKLNNTLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +     
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                ++  YP    A       D +  K  ++    I E+    +   D  +  +R ++
Sbjct: 347 KKPV-VVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSEREDDLQKLENRIKE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 406 LNLNIEHLN---WYLD---LRRF-GSAPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 456


>gi|225549689|ref|ZP_03770654.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369649|gb|EEG99097.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 462

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 101/358 (28%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QDHIR--------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + +               K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +     
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                ++  YP    A       D +  K  ++    I E+    +   D  +  +R ++
Sbjct: 347 KKPV-VVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSEREDDLQKLENRIKE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 406 LNLNIEHLN---WYLD---LRRF-GSAPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 456


>gi|216264242|ref|ZP_03436234.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980715|gb|EEC21522.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 462

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 101/358 (28%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QDHIR--------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + +               K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKLNNAPSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +     
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                ++  YP    A       D +  K  ++    I E+    +   D  +  +R ++
Sbjct: 347 KKPV-VVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSEREDDLQKLENRIKE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 406 LNLNIEHLN---WYLD---LRRF-GSAPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 456


>gi|6319872|ref|NP_009953.1| Slm5p [Saccharomyces cerevisiae S288c]
 gi|135160|sp|P25345|SYNM_YEAST RecName: Full=Asparaginyl-tRNA synthetase, mitochondrial; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS; Flags:
           Precursor
 gi|1907168|emb|CAA42316.1| asn-tRNA synthetase, mitochondrial [Saccharomyces cerevisiae]
 gi|151943844|gb|EDN62144.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|190406459|gb|EDV09726.1| asparaginyl-tRNA synthetase, mitochondrial precursor [Saccharomyces
           cerevisiae RM11-1a]
 gi|256269678|gb|EEU04950.1| Slm5p [Saccharomyces cerevisiae JAY291]
 gi|285810718|tpg|DAA07502.1| TPA: Slm5p [Saccharomyces cerevisiae S288c]
 gi|323338576|gb|EGA79795.1| Slm5p [Saccharomyces cerevisiae Vin13]
 gi|323356011|gb|EGA87818.1| Slm5p [Saccharomyces cerevisiae VL3]
          Length = 492

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 111/356 (31%), Gaps = 32/356 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSL---REY--------FVENQFIEIDSMSLQYS---PGNETHI 59
            + R  P L  R    S++   R +        F +N F ++    L  +      E   
Sbjct: 135 RYLRSLPTLKYRTAYLSAILRLRSFVEFQFMLYFQKNHFTKVSPPILTSNDCEGAGELFQ 194

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFT 118
            + +T      +  KP YL  S +    ++LA    + +  +  +R  +     H  EF 
Sbjct: 195 VSTNTSPTASSYFGKPTYLTVSTQLHL-EILALSLSRCWTLSPCFRAEKSDTPRHLSEFW 253

Query: 119 MLEWYRAHESYEQLMKDCMN----IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           MLE      +    +   +      I  A     Q++   Q ++    +    +++ +  
Sbjct: 254 MLEVEMCFVNSVNELTSFVETTIKHIIKACIDNQQELLPKQFISSQENNASSELSINQET 313

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILIEKIEPNLG 231
            +          +              ++    V+H   +  W         + +     
Sbjct: 314 QQIKTRWEDLINEKWHNITYTNAIEILKKRHNEVSHFKYEPKWGQPLQTEHEKFLAGEYF 373

Query: 232 INCCTILDRYPAPESALANIYPADPRFTK-RFELYACNIELCNACDELLDPIEQRHRFEK 290
            +    +  YP           + P  T   F+L    +          D  ++  R   
Sbjct: 374 KSPV-FVTDYPRLCKPFYMKQNSTPDDTVGCFDLLVPGMGEIIGGSLREDDYDKLCR--- 429

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             + K +  N +  +D  +++          G  +GF+R +  + G +NI + I  
Sbjct: 430 --EMKARGMNRSGELDW-YVSLRKEGSAPHGGFGLGFERFISYLYGNHNIKDAIPF 482


>gi|15594447|ref|NP_212235.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|3915060|sp|O51128|SYN_BORBU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|2687998|gb|AAC66501.1| asparaginyl-tRNA synthetase (asnS) [Borrelia burgdorferi B31]
          Length = 466

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 101/358 (28%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 126 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 184

Query: 69  QDHIR--------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            + +               K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 185 FNKLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 244 ASEFWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNECS-------------QDMDFLEN 290

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +     
Sbjct: 291 YIEKGLIKKLENVINSNFEVITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEETF 350

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
                ++  YP    A       D +  K  ++    I E+    +   D  +  +R ++
Sbjct: 351 KKPV-VVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSEREDDLQKLENRIKE 409

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 410 LNLNIEHLN---WYLD---LRRF-GSAPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 460


>gi|50552304|ref|XP_503562.1| YALI0E04939p [Yarrowia lipolytica]
 gi|49649431|emb|CAG79143.1| YALI0E04939p [Yarrowia lipolytica]
          Length = 473

 Score =  135 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 105/353 (29%), Gaps = 24/353 (6%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNET 57
           +  +P+   W    +      L  R+   + +  +F EN F++ +   L  S      E 
Sbjct: 132 LRTLPAL-RWRTSVNS---STLRYRSFCMAQMTNFFAENDFVQTNPPLLTSSDCEGAGEV 187

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPE 116
             +        +    KP YL  S +    ++LAA   +++ F  A+R        H  E
Sbjct: 188 F-KVAGGGKGDKFFGDKPAYLTVSTQLHL-EVLAAAVGRVWTFTPAFRAENSDTNRHLSE 245

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           F M E   +     + + D    +  +      +  +    +            AE    
Sbjct: 246 FWMAEAEISFIDDLEPLMDLAEGMVKSCLAPLMEEGNKARNDLLDARR-----SAEQKEE 300

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
             +       D P    +  + +   Q            ++  R   EK           
Sbjct: 301 LLDRWDMANCDFPRLTYKQAIKILNLQHLKEPFAHRPDYEVGLRSEHEKWLATEYFISPV 360

Query: 237 ILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            +  YP  +        P D +    F+L   +I          D  +   +      E 
Sbjct: 361 FVTDYPKEQKPFYMKQSPHDSQTVACFDLLMPHIGEVIGGSVREDNYDTLLK----NIET 416

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +        E +L           G  MGF+RL+   TG  NI +V   P 
Sbjct: 417 TGMDKSAL---EWYLELRKQGSTPHGGFGMGFERLISYATGIENIRDVTAFPR 466


>gi|326330922|ref|ZP_08197222.1| aspartyl-tRNA synthetase [Nocardioidaceae bacterium Broad-1]
 gi|325951280|gb|EGD43320.1| aspartyl-tRNA synthetase [Nocardioidaceae bacterium Broad-1]
          Length = 455

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 59/342 (17%), Positives = 104/342 (30%), Gaps = 28/342 (8%)

Query: 18  RRPFLLKRNMIQSS----LREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
           R P +  R  + ++     R       F E+ S  +  S   E+    F       D+  
Sbjct: 125 RHPAVRARWELAAASLRGFRATLDAAGFTEVHSPKIVDSA-TESGANVFEI-----DYFG 178

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHE-SYEQ 131
           +P YL  SP+F  ++ LA   E+++     +R        H  E+  L+        +  
Sbjct: 179 RPAYLAQSPQFYKQQ-LAGVFERVYEVGPVFRAEPHDTVRHLAEYVSLDVELGFIRDHRD 237

Query: 132 LMKDCMNIIRCAAEVANQKI---FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           ++      +    E             ++      E   +       +            
Sbjct: 238 VLAVLREALAGMVEGIETYAAAAVERLDMELPVVPEEIPVIHFAEALKLVGAPEDEPETT 297

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
             +    L    A   G+  A     +    R L        G +    ++RYP  +   
Sbjct: 298 GARSSGELARPLAPSEGV-TARSADLAPEHERALGAWARETYGSD-FLAVERYPMRKRPF 355

Query: 249 A-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
             +  P D R++  F+L    +EL      L    +       E   + +          
Sbjct: 356 YTHPEPRDERWSNSFDLLFRGLELVTGGQRLHRLTDY------EAAIRARGEEPAAY--A 407

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +L      MP   G A+G +R V  +  A NI EV   P  
Sbjct: 408 SYLQAFAHGMPPHGGFALGLERWVARLVRAANIREVALFPRD 449


>gi|218295720|ref|ZP_03496516.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243879|gb|EED10406.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 422

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 105/362 (29%), Gaps = 52/362 (14%)

Query: 4   IPSQPWW-NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
           IP + W  + D     R            L  +  +    R Y     F EI +  +  +
Sbjct: 96  IPKEEWRAHPDTLLEYRYVTLRGEKARAPLKVQAALVRGFRRYLDRQDFTEIFTPKVVRA 155

Query: 53  -PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
                + +          D+  K  YL  SP+   K+++    E+++  A  WR  E   
Sbjct: 156 GAEGGSGL-------FGVDYFEKRAYLAQSPQLY-KQIMVGVFERVYEVAPVWRMEEHNT 207

Query: 112 -LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  E+  L+        E+ +      +              +               
Sbjct: 208 SRHLNEYLSLDVEMGFIGSEEDLMRLEEELLGEMLEEALSSAGREIALLGAEWP------ 261

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                           + P         +  ++ G  V  D   S+   R+L +      
Sbjct: 262 ------------SPPHNIPRLTHAEARRILKEELGYPVGLD--LSEEAERLLGQYARERW 307

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
           G +    L RYP          P D   T+ F+L    +E+ +    +    +     E 
Sbjct: 308 GSD-WLFLTRYPRAIRPFYTY-PEDDGTTRSFDLLFRGLEITSGGQRIHRYGDLLASLEA 365

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                K +  E +     +L      MP   G A+G +RL   + G  N+      P  +
Sbjct: 366 -----KGMDPEGF---RGYLEVFKYGMPPHGGFAIGAERLTQKLLGLPNVRYARAFPRDR 417

Query: 350 SN 351
             
Sbjct: 418 HR 419


>gi|254166551|ref|ZP_04873405.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596521|ref|YP_003483217.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624161|gb|EDY36722.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534308|gb|ADD08655.1| asparaginyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 430

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 107/349 (30%), Gaps = 43/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R         L  R+ +  ++ E+F EN + E+           E     F 
Sbjct: 115 LDNRHLWLRSREM--NAILKIRHTVFGAIHEFFRENGYYEVQGPIFVTGAV-EGGSTLFE 171

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
                  +  K  YL  S +F  +  + +  E+++  A ++R  +     H  E+   E 
Sbjct: 172 VP-----YFGKKAYLSQSAQFYLETFIFS-LERVYTIAPSFRAEKSRTRRHLTEYWHAEG 225

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    E +M+D   +I    +   ++                     E   ++ N D 
Sbjct: 226 EVAWYHNEDMMRDEEELIMHIVQKVLEE--------------------REKELKFLNRD- 264

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L N ++P   + Y +  +       +  + D         I      +    +  YP
Sbjct: 265 LEILKNLEKPFIRMKYEELIEFAQENGINIEYGDDLGADEETAITKK--FDKPIFVTHYP 322

Query: 243 APESALANIYPADPRF---TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                  +    D                 E+    + +        R E+     + + 
Sbjct: 323 IEIKPFYHRPDPDNPKVVLCHDLLAPEGYGEIIGGGERIYKLDVLLRRMEE-----EGLN 377

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y    D           SG  +G DRLV  + G ++I   I  P +
Sbjct: 378 PEDYYWYVDLRK--YGSIPHSGFGLGVDRLVWWLAGLSHIKYAIPYPRT 424


>gi|224531928|ref|ZP_03672560.1| asparaginyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511393|gb|EEF81799.1| asparaginyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 462

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 100/358 (27%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QD--------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            +                 K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKPNNSLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    N+++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNIILAENLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           +++         W           +     
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIEILEKSKKNFEIKPYWGIDLQTDHERYLTEETF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH-RFEK 290
                ++  YP    A       D +  K  ++    I       E  D +++   R ++
Sbjct: 347 KKPV-VIIDYPKNFKAFYMKINKDNKTVKGMDILVPRIGEIIGGSEREDNLQKLENRIKE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 406 LNLNIEHLN---WYLD---LRRF-GSTPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 456


>gi|299783376|gb|ADJ41374.1| Asparagine--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 431

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 109/351 (31%), Gaps = 46/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    + +  +  R+ +  +  E+F E+ F +ID   L   +P         
Sbjct: 115 LDHRHLWLRSS--KPQAMMRIRDRVIRANYEFFGEHGFTKIDPPILTGNAPEG------- 165

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++  +  YL  S +   ++  A    +++ F   +R  +     H  EF M+E
Sbjct: 166 TTDLFHTEYFDQDAYLSQSGQLY-EEAGAMALNRVYSFGPVFRAEKSKTRRHLIEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+ ++     +    +                      I            D
Sbjct: 225 PEMAFMHQEESLELQEQYVAYLIQKV--------------------IDDCSRELEVLGRD 264

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             T       P   + Y +A +   +   D  W + F       +      +    +  Y
Sbjct: 265 PETLKPFTQLPYPRISYDEAIEMLQKAGMDIKWGEDFGSPEETYLADQ--FSKPVFVLNY 322

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCN-ACDELLDPIEQRHRFE--KEMQEKKKI 298
           P                  R ++Y C   L      E++   E+   +E  ++      +
Sbjct: 323 PKAIKPFYMK-----GHPTRDDVYVCADLLAPEGYGEIIGGSERETDYETLRQAIADAGL 377

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + Y     +L          SG  +G +R +  +    ++ E I  P  
Sbjct: 378 DEKDYQ---WYLDLRKYGSVPHSGYGLGLERFLTWIALQGHVRETIPFPRL 425


>gi|299135981|ref|ZP_07029165.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298602105|gb|EFI58259.1| asparaginyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 449

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 59/346 (17%), Positives = 105/346 (30%), Gaps = 38/346 (10%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAFST 64
            +  W R    R+   L  R  I  +  EYF  N FI  D   L  +     + +  F  
Sbjct: 127 HRHLWLRT--PRQSAILRVRATIMRAAAEYFDTNGFIRTDPPILTPNACEGTSEL--FEM 182

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           +           YL  S +   +    A   K++ F   +R  +     H  EF M+E  
Sbjct: 183 DYFD----DDKAYLTQSGQLYIEATALA-LGKVYSFGPTFRAEKSKTRRHLTEFWMIEPE 237

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
             +   + LM      +        +   + +        E   +    A   +  +   
Sbjct: 238 VTYLDLDGLMGLAEGFLTHIVTRVLE---THRADLKVIGKEVSKLEAVAAPGEFPRLSYD 294

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                    + H + ++A   G+ + +  T+ D F       I  +   +   ++ RYPA
Sbjct: 295 ---------EAHQMLVEAHAKGL-IENAHTYGDDFGSPDETYI--SNQFDKPVMVHRYPA 342

Query: 244 PE-SALANIYPADPRFT-KRFELYACNIELCNACDELLDPIEQRH-RFEKEMQEKKKIYN 300
              +      P DP        L            + +D  +    R E+          
Sbjct: 343 EVKAFYMQPDPNDPTKALCVDVLAPEGYGEIIGGSQRVDSYDLLKSRIEQHNLPLAAF-- 400

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 + +L          SG  MG +R V  + G  ++ E I  
Sbjct: 401 ------QWYLDLRKYGSVPHSGFGMGIERAVAWICGLEHVRETIPF 440


>gi|330445747|ref|ZP_08309399.1| asparaginyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489938|dbj|GAA03896.1| asparaginyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 466

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 109/356 (30%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------- 58
            H R R          RN +  ++  ++ E  F  + +  +  S      E         
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWMSAPLITASDCEGAGEMFRVSTLDM 184

Query: 59  IRAFSTE----LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                T+       +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ANLPMTDKGEVDFDKDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + + K   ++++   +   ++    +  +   F++         
Sbjct: 244 LAEFWMVEPEVAFAELDDVAKLAEDMLKYVFKAVLEE----RRDDLEFFAQRIDKDAISR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++   D           D        Q +G +   D  W    S      +       
Sbjct: 300 LEKFVTSDFAQV-------DYTDAIKILQDSGRKFEFDVEWGIDMSSEHERYLAEEH-FQ 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              I+  YP    A       D +             L     E++   ++  R +  + 
Sbjct: 352 APVIVKNYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDILDA 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  +   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 406 RMVEMGLDPEHMGWYRDLR-RYGSVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|312148011|gb|ADQ30670.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 462

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 101/359 (28%), Gaps = 46/359 (12%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
                R          RN I   + EYF +N F  I++  +  +       I  F    +
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSNDGEGAGEI--FRVSTL 179

Query: 68  IQDHIR--------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
             + +               K  +L  + +   +    A   KI+ F   +R        
Sbjct: 180 RFNKLNNALSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTR 238

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF M+E   A       +    ++++        +               + +   E
Sbjct: 239 HASEFWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNECS-------------QDMDFLE 285

Query: 173 AFARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            +     I         N +           + +         W           +    
Sbjct: 286 NYIEKGLIKKLENVINSNFEVITYTKAIEILENSKKNFEIKPYWGIDLQTDHERYLTEET 345

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFE 289
                 ++  YP    A       D +  K  ++    I E+    +   D  +  +R +
Sbjct: 346 FKKPV-VVIDYPKNFKAFYMKANKDNKTVKGMDILVPKIGEIIGGSEREDDLQKLENRIK 404

Query: 290 KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +     + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 405 ELNLNIEHLN---WYLD---LRRF-GSAPHSGFGLGLERLVQYSTGISNIRDSIPFPRT 456


>gi|110800091|ref|YP_695221.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110674738|gb|ABG83725.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 429

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 108/333 (32%), Gaps = 37/333 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N+I  S RE+  +  F EI +  +              TE+    +  
Sbjct: 122 RHKKINAIFKVQNIITDSFREFLNKEGFTEIHTPKIVK--EGAEGG----TEVFEVKYFE 175

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
              YL  SP+F  + ++ AG E++F   HA+R  E     H  E+  ++        E  
Sbjct: 176 NKAYLAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYVSMDLEMGFIENEFD 235

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + +    +      +                    I   E       ++L    +   + 
Sbjct: 236 IMNLEENLLKFILNSL------------------RIKGKEY-LELLQVELPVIYEEIPKI 276

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           + +      ++   +   D        ++L +  +  L  +    L  YP  +  +  + 
Sbjct: 277 EFNEAIEILKEQYNKNDLDGDLDPEAEKLLYKYAKEKLNSD-FLFLTNYPRKKRPMYTMP 335

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             +   T  F+L    IE+      + D              K K  N      E +L  
Sbjct: 336 KGEKG-THSFDLLFRGIEITTGGQRIHDYEMLVE------NMKYKGLNPNSY--ESYLEL 386

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
               MP+  G+A+G +R+   + G  N+ E   
Sbjct: 387 FKLGMPKHGGLAIGLERITARILGLENVREATL 419


>gi|328716488|ref|XP_003245957.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Acyrthosiphon pisum]
          Length = 520

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 50/334 (14%), Positives = 110/334 (32%), Gaps = 35/334 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           +       ++    RE      F+EI          GN        T +    + +   Y
Sbjct: 212 QAIFRLEAVVCKFFREILTAKGFVEIFPPRIKNAVTGNG-------TNVFKISYFKGSAY 264

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L   P F     +A   E++F     +R  +     H  EFT L      + +   + D 
Sbjct: 265 LAQCPTFHNIIAIAGDFERVFTIGPVFRPEDSNSHRHLTEFTNLNLEMTFKHHYHEVVDV 324

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           +  +  +     ++ +  +                       +++    LD P + +  +
Sbjct: 325 IASLFTSIFKGLRENYQSEIKTICEQY---------------SVEPFKFLDPPLKLEFPM 369

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                ++ G+ +  +D  S    ++L   ++     +   ILD++P    +   +   D 
Sbjct: 370 AVNMLRENGVEMGDEDDLSIPNEKLLGRLVKAKYDTD-FYILDKFPLAIRSFETMPDPDS 428

Query: 257 RF-TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           +  +  ++++    E+      + D      R      +  ++  E +     +L     
Sbjct: 429 KVGSNSYDMFMRGEEVLTGGQRIHDYHYLMKR-----AKHCQVDIEKFAY---YLDAFRY 480

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             P  +G  +G +R+VML  G +NI      P  
Sbjct: 481 GCPPLAGGGIGLERVVMLYLGLDNIRIASMFPRD 514


>gi|227364245|ref|ZP_03848340.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325683447|ref|ZP_08162963.1| asparagine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|227070727|gb|EEI09055.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977797|gb|EGC14748.1| asparagine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 448

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 109/350 (31%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    +    +  R+ ++ +  E+F ++ F + D+  L   +P         
Sbjct: 132 LDNRHLWLRSR--KPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEG------- 182

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +  +L  S +   +    A   +++     +R  +     H  EF M+E
Sbjct: 183 TTELFETDYFDRSAFLSQSGQLYAEAGAMA-LGRVYTMGPTFRAEKSKTRRHLMEFWMIE 241

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +K     I    +                      I             
Sbjct: 242 PEMAWMHQDESLKIQEQYIAYLVQDL--------------------IDHCARELEMVGRS 281

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + +     + P   + Y +A +   +   D  +   F       +           +  Y
Sbjct: 282 VESLKPFTELPYPRITYKEAIEILQKGGFDVEYGADFGSPEETYLADQ--FQKPVFILNY 339

Query: 242 PAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    A      P D R     +L            E++   E+ + +E    + ++   
Sbjct: 340 PKEIKAFYMPEDPEDSRQVICADL-----LAPEGYGEIIGGSERSYDYEYITNKLEENGL 394

Query: 301 ETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                D  +   L        SG  MG +R +  +T  ++I E I  P  
Sbjct: 395 SKE--DYGWYDDLRKYGSIPHSGFGMGLERFLAWITLQDHIRETIPFPRM 442


>gi|256828075|ref|YP_003156803.1| asparaginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577251|gb|ACU88387.1| asparaginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 460

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 100/355 (28%), Gaps = 40/355 (11%)

Query: 14  FHYRRRPF-L----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST--- 64
            H R R          R  +   + ++F E  F  + +  +  S       +   +T   
Sbjct: 120 AHLRPRTNKFGALNRIRAELSYGVHQFFREQGFFNVHAPIITGSDCEGAGEMFQVTTLDL 179

Query: 65  ---------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
                        QD   K   L  S + + + L  A   +++ F   +R        H 
Sbjct: 180 SNVPKKNGKADFDQDFFGKEASLTVSGQLAAENLACA-LGRVYTFGPTFRAENSNTPKHA 238

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A       M    + I+         +      +   F       +    
Sbjct: 239 AEFWMIEPEMAFAGLSDNMDLGESCIK----WLITHLMDHCRDDLELFGNFVDKGL---- 290

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             +A +D          P    +    + A         +           +  +     
Sbjct: 291 --FATLDNILAKPFIRLPYAEAVT-ILKSASRTFEFPVDFGTDLQTEHERYLTEDHFKQP 347

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             +   YP    A       D       +       L     EL+    +  R +   + 
Sbjct: 348 VIVF-DYPKEIKAFYMRLNDD------DKTVGAMDVLVPRIGELIGGSAREERLDVLERR 400

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +++          +L          +G  MGF+RL+MLVTG  NI +VI  P +
Sbjct: 401 IEELGLPKEDY-WWYLDLRRFGSVPHAGFGMGFERLLMLVTGIANIRDVIPFPRT 454


>gi|294101384|ref|YP_003553242.1| asparaginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616364|gb|ADE56518.1| asparaginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 434

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 112/349 (32%), Gaps = 42/349 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    R++  +  R  +  + REY     F+ IDS  L        + +  F
Sbjct: 118 LDNRHLWLRSS--RQQAIMRIRERVIWAAREYLHNEGFMLIDSPILTGSIGEGASGL--F 173

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             +    D      YL  + +    +  AA   K++CF   +R  +     H  EF MLE
Sbjct: 174 ELDYFEND----KAYLAQTGQLYA-EAAAAAFGKVYCFGPTFRAEKSKTRRHLTEFWMLE 228

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A   ++  +K   N++    E       +         S+ E +             
Sbjct: 229 PEVAFYDHDLNIKLQENLVAYIVEHVLLHCKNELESLGRDLSKLEKVKP----------- 277

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                     P   + Y +A +    +     + D F       +      +    ++ Y
Sbjct: 278 ----------PFYRITYDKAIEMLHELGSSTPYGDDFGNEDETIL--TQQFDKPIFVECY 325

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    +     +P +P      +L            E++   ++    ++ +   K+   
Sbjct: 326 PKKVKAFYMKEHPENPDLVLCDDL-----LAPEGYGEIIGGSQREDDMKRLIARIKEEGL 380

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                D  +L          SG  MG +R++  + G  +I E    P +
Sbjct: 381 NEKSYDW-YLDLRKFGTFVHSGFGMGIERVIAWICGLEHIREASPWPRT 428


>gi|219685338|ref|ZP_03540157.1| asparagine--tRNA ligase [Borrelia garinii Far04]
 gi|219673111|gb|EED30131.1| asparagine--tRNA ligase [Borrelia garinii Far04]
          Length = 485

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 98/357 (27%), Gaps = 42/357 (11%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QD--------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            +                 K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKPNNSLGNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFCKLNDNISLAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +   + 
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIAILENSKKNFDIKPCWGIDLQTDHERYLTEEIF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                ++D     ++    I   +        L     E+    +   D  +  +R ++ 
Sbjct: 347 KKPVVVIDYPKNFKAFYMKINKDNKTVKGMDILVPRIGEIIGGSEREDDLQKLENRIKEL 406

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 407 NLNIEHLN---WYLD---LRRF-GSTPHSGFGLGLERLVQYTTGISNIRDSIPFPRT 456


>gi|156974183|ref|YP_001445090.1| asparaginyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156525777|gb|ABU70863.1| hypothetical protein VIBHAR_01897 [Vibrio harveyi ATCC BAA-1116]
          Length = 472

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 104/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 131 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 188

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 189 DMENLPRTEEGKVDYNEDFFGKETFLTVSGQLNGEAYACA-LSKVYTFGPTFRAENSNTS 247

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   + A ++       +   F++       
Sbjct: 248 RHLAEFWMVEPEVAFADLNDIAKLSEDMLKYVFKAALEEC----RDDLEFFAQRIDKEAI 303

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++ + D           D          +G        W    S      +     
Sbjct: 304 TRLEKFVSSDFAQV-------DYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHF 356

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK- 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 357 KAPVIVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDIL 409

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++      +      L         +G  +GF+RLV  VT   N+ +VI  P +
Sbjct: 410 DERMREIGIVPEHMNWYRDLR-RYGTVPHAGFGLGFERLVSYVTSMGNVRDVIPFPRT 466


>gi|70990316|ref|XP_750007.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus fumigatus Af293]
 gi|66847639|gb|EAL87969.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus fumigatus Af293]
 gi|159130487|gb|EDP55600.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus fumigatus A1163]
          Length = 947

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/311 (19%), Positives = 108/311 (34%), Gaps = 27/311 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ + +  R    E  FIEI +  LQ S   E+    F       ++  +  +
Sbjct: 278 SQSIFRLQSALCNIFRSSLDEQGFIEIHTPKLQGSA-TESGASVFQV-----NYFGRDAF 331

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +AA  E+++     +R        H  E+T L+   A E +   M D 
Sbjct: 332 LAQSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEMLDV 391

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           +  +          E +   E        D    L+     D   
Sbjct: 392 LDAVIKNMLKGVYGRYRREIEIVKHQFPSEDVVWLEETPIIRFSDGIKMLNESGWRDED- 450

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                   G  +  DD         L E ++   G +   ILD++P           P D
Sbjct: 451 --------GNPLPEDDDLHTRDEIRLGELVKEKYGTD-YYILDKFPVAARPFYAMPDPED 501

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
           PRFT  F+++    E+ +    + DP     R  +E   +  I  +T    ED+L     
Sbjct: 502 PRFTNSFDIFIRGQEIVSGGQRIHDP-----RMLEESMRRSGINPDTM---EDYLEGFRW 553

Query: 315 EMPQSSGIAMG 325
             P  +G  +G
Sbjct: 554 GAPPHAGAGVG 564


>gi|46138565|ref|XP_390973.1| hypothetical protein FG10797.1 [Gibberella zeae PH-1]
          Length = 534

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 104/363 (28%), Gaps = 37/363 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R       L  R+   + L ++F   +F +     +  S          F  +   
Sbjct: 172 HLRSRTPLNSTMLRLRSDATAMLTQFFFRERFQQTHPPIITSSDCEGAGEA--FVVKASS 229

Query: 69  QDHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAH 126
            D   R P YL  S +    + LA     ++  +  +R  +     H  EF MLE   + 
Sbjct: 230 PDEFFRAPKYLTVSSQLHL-EALAQSLGNVWTLSPTFRAEKSDTSRHLSEFYMLEAEMSF 288

Query: 127 ESYEQLMKDCMNIIRCAAEVANQK--IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
                 + +    +  +     ++         N     EP      +       +D   
Sbjct: 289 VDDMNEVMNLAQRMLNSLTSGLKELNAAKELKKNRVDSKEPSERLAFKDLVEQEQLDRRW 348

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRV----AHDDTWSDIFSRILIEKIEPNLGINC------ 234
                 +    + Y +A +    +     H   W         + +   +G +       
Sbjct: 349 QGMLTTKTWPRITYSEAIEILKPIADQFKHRPQWGAGLQSEHEKYLAERIGYDETTDAYV 408

Query: 235 CTILDRYPAPESALANIYPADPR----FTKRFELYACNI-ELCNACDELLDPIEQRHRFE 289
              + +YP    A      +           F+L   N+ EL           + +    
Sbjct: 409 PVFITQYPRDIKAFYMRQSSSSPSSGLTVDCFDLLVPNMGELAGGSMREHRLPQLKENMR 468

Query: 290 KE-----MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
                   +         + +D          P   G  +GFDRL+  ++G  N+ +V+ 
Sbjct: 469 ALGLEVPSKHSAGGKEMAWYLDLR----RWGCPPHGGFGLGFDRLLSYLSGVPNVRDVVP 524

Query: 345 TPF 347
            P 
Sbjct: 525 FPR 527


>gi|301633224|gb|ADK86778.1| asparagine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 455

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 115/346 (33%), Gaps = 36/346 (10%)

Query: 15  HYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFSTELII 68
             R R     +  R+++  ++ +YF +N F+ + S  L  +      ET    F  +   
Sbjct: 126 RVRARTYFAIMKVRSLLSQAIFDYFFKNDFVLVHSPILTSNDCEGAGET----FELKQGK 181

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHE 127
           +    K  YL  S +    +  A   +K+F F   +R  +     H  EF M+E   A  
Sbjct: 182 E-FFNKTTYLTVSGQ-FGAECYAQAFKKVFTFGPTFRAEKSHTSRHLSEFWMIEPEVAFA 239

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
           +    +KD + +I    +   +++        +   +   + + E   +  +      L+
Sbjct: 240 N----LKDLIKLIESTVKTVIKQVMQKAKQELDFLEKQFDVKLMERLKQITSTKNFHVLE 295

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                +       + QA   V  D  +           +      N    +  YP    A
Sbjct: 296 YIKALEILKTAQASGQANFEVQ-DFNFGLDLKTEHERFLCEQHFHNQPVFVINYPKDLKA 354

Query: 248 LANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                 AD R     +L    I E+C   +   +  +   R +               ID
Sbjct: 355 FYMKQNADGRTVGAVDLLFPQIGEICGGSEREGNLEKLVERCQ------------AMQID 402

Query: 307 E----DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 +L         S+G  +GFDRL+  + G  NI + I  P 
Sbjct: 403 TQTLNWYLDMRKWGYFASAGFGLGFDRLLAYICGLENIRDAIPFPR 448


>gi|323305821|gb|EGA59559.1| Slm5p [Saccharomyces cerevisiae FostersB]
          Length = 492

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 111/356 (31%), Gaps = 32/356 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSL---REY--------FVENQFIEIDSMSLQYS---PGNETHI 59
            + R  P L  R    S++   R +        F +N F ++    L  +      E   
Sbjct: 135 RYLRSLPTLKYRTAYLSAILRLRSFVEFQFMLYFQKNHFTKVSPPILTSNDCEGAGELFQ 194

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFT 118
            + +T      +  KP YL  S +    ++LA    + +  +  +R  +     H  EF 
Sbjct: 195 VSTNTSPTASSYFGKPTYLTVSTQLHL-EILALSLSRCWTLSPCFRAEKSDTPRHLSEFW 253

Query: 119 MLEWYRAHESYEQLMKDCMN----IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           MLE      +    +   +      I  A     Q++   Q ++    +    +++ +  
Sbjct: 254 MLEVEMCFVNSVNELTSFVETTIKHIIKACIDNQQELLPKQFISSQENNASSELSINQET 313

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DDTWSDIFSRILIEKIEPNLG 231
            +          +              ++    V+H   +  W         + +     
Sbjct: 314 QQIKTRWEDLJNEKWHNITYTNAIEILKKRHNEVSHFKYEPKWGQPLQTEHEKFLAGEYF 373

Query: 232 INCCTILDRYPAPESALANIYPADPRFTK-RFELYACNIELCNACDELLDPIEQRHRFEK 290
            +    +  YP           + P  T   F+L    +          D  ++  R   
Sbjct: 374 KSPV-FVTDYPRLCKPFYMKQNSTPDDTVGCFDLLVPGMGEIIGGSLREDDYDKLCR--- 429

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             + K +  N +  +D  +++          G  +GF+R +  + G +NI + I  
Sbjct: 430 --EMKARGMNRSGELDW-YVSLRKEGSAPHGGFGLGFERFISYLYGNHNIKDAIPF 482


>gi|302387990|ref|YP_003823812.1| tRNA synthetase class II (D K and N) [Clostridium saccharolyticum
           WM1]
 gi|302198618|gb|ADL06189.1| tRNA synthetase class II (D K and N) [Clostridium saccharolyticum
           WM1]
          Length = 441

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/338 (14%), Positives = 111/338 (32%), Gaps = 38/338 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
            + R R     +  I   +RE+  + +F E+ +  + Y+      +I          ++ 
Sbjct: 133 RNERERAIFKLQEGITCGIREFLKQERFTEVHTPKIVYAGAEGGANI-------FCLNYF 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQ 131
            K  YL  SP+F  +  +    E++F  A  +R  +     H  E+T +++   +    +
Sbjct: 186 GKEAYLAQSPQFYKQM-MVGVYERVFEIAPVFRAEKHDTSRHLNEYTSVDFEMGYIDSFE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +     ++     V  ++ +                   E   R  N  L    + P  
Sbjct: 245 DIMQMETMMLRHVMVYLKEQY-------------------ENEIRLLNAKLPVIDEIPAI 285

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
             +    + +      V   D +     R+L E ++   G      +  YP+ +      
Sbjct: 286 KFKEAKEMISLDYRRPVKDFDDFEPEEERLLYELVKQKTGSE-FVFVTHYPSRKRPFYAK 344

Query: 252 YP-ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +   T  F+L    +E+      +        ++++++ + +         D   +
Sbjct: 345 DSGENQEETLSFDLLFRGLEITTGGQRIH-------KYKEQIAKMEYRGMNAELFDTYLM 397

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                MP   G+ +G +R    +   +N+      P  
Sbjct: 398 MHKYGMPPHGGLGLGLERFTGKLLEQDNVRLSTLFPRD 435


>gi|254228139|ref|ZP_04921568.1| asparaginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262393921|ref|YP_003285775.1| asparaginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151939212|gb|EDN58041.1| asparaginyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262337515|gb|ACY51310.1| asparaginyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 472

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 106/358 (29%), Gaps = 45/358 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 131 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 188

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           +D   K  +L  S + + +    A   K++ F   +R       
Sbjct: 189 DMENLPRTDAGKVDYNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTS 247

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A    + + K   ++++   +   ++             + E ++  
Sbjct: 248 RHLAEFWMVEPEVAFAELDDVAKLAEDMLKYVFKAVLEERRDDLEFFAQRIDK-EAVSRL 306

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E F             +  Q D          +G        W    S      +     
Sbjct: 307 ENF----------VSSDFAQVDYTDAIQILLDSGREFEFPVEWGIDMSSEHERFLAEEHF 356

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-K 290
                +   YP    A       D +             L     E++   ++  R +  
Sbjct: 357 KAPVIVK-NYPKDIKAFYMRMNDDGKTVAAM------DVLAPGIGEIIGGSQREERLDVL 409

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           + + ++   +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 410 DTRMREMGIDPEHMSWYRDLR-RYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 466


>gi|156089681|ref|XP_001612247.1| asparaginyl-tRNA synthetase family protein [Babesia bovis]
 gi|154799501|gb|EDO08679.1| asparaginyl-tRNA synthetase family protein [Babesia bovis]
          Length = 605

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/386 (15%), Positives = 112/386 (29%), Gaps = 60/386 (15%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R       +  R+ +  +   YF     I + +  +  +       +   +T L 
Sbjct: 221 AHLRPRSYFISSVMRVRSALAMATHIYFQRLGCIYLHTPLITTTDCEGAGELFQVTTMLE 280

Query: 67  ------------------------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
                                           +D  ++  YL  S + S +    +   K
Sbjct: 281 DCKTLGDLAKKMTAHGDPKKAKILEEMEMDYKKDFFKRKAYLTCSGQLSAENYACS-MGK 339

Query: 97  IFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNI----IRCAAEVANQKI 151
           ++ F   +R        H  EF M+E         + M          I+ A +     +
Sbjct: 340 VYTFGPTFRAEHSHTSRHLAEFWMVEPEIDFCDLAKNMDIAEEYVQFAIKYALDHCLDDL 399

Query: 152 FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD----RHLLYLQAQQ---- 203
              +++      +       E F R    D+   L   +         +   Q ++    
Sbjct: 400 LYLESIGDKGLVDSLRSFATEKFVRITYTDVIDILMQHEADFQAGRVEIDSAQCKREDGS 459

Query: 204 --AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
                   +   W    S      I   +      I+  YPA   A       D +    
Sbjct: 460 EPRKTAFENHVEWGIDLSSEHERFIAEAVFKKPT-IIYNYPAKIKAFYMRRNDDGKTCAA 518

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSG 321
            ++            +  +  +      K+      + + T+ +D   L         SG
Sbjct: 519 MDVIVPRFGELVGGSQREERRDVLEDSIKQNGL--CMDDYTWYMD---LRT-YGSIPHSG 572

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPF 347
             +GF+RLVMLVTG +NI +VI  P 
Sbjct: 573 FGLGFERLVMLVTGVSNIRDVIPFPR 598


>gi|168217437|ref|ZP_02643062.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182380537|gb|EDT78016.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 429

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 108/333 (32%), Gaps = 37/333 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N+I  S RE+  +  F EI +  +              TE+    +  
Sbjct: 122 RHKKINSIFKVQNIITDSFREFLNKEGFTEIHTPKIVK--EGAEGG----TEVFEVKYFE 175

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
              YL  SP+F  + ++ AG E++F   HA+R  E     H  E+  ++        E  
Sbjct: 176 NKAYLAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYVSMDLEMGFIENEFD 235

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + +    +      +                    I   E       ++L    +   + 
Sbjct: 236 IMNLEENLLKFILNSL------------------RIKGKEY-LELLKVELPVIYEEIPKI 276

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           + +      ++   +   D        ++L +  +  L  +    L  YP  +  +  + 
Sbjct: 277 EFNEAIEILKEQYNKNDLDGDLDPEAEKLLYKYAKEKLNSD-FLFLTNYPRKKRPMYTMP 335

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             +   T  F+L    IE+      + D              K K  N      E +L  
Sbjct: 336 KGEKG-THSFDLLFRGIEITTGGQRIHDYEMLVE------NMKYKGLNPNSY--ESYLEL 386

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
               MP+  G+A+G +R+   + G  N+ E   
Sbjct: 387 FKLGMPKHGGLAIGLERITARILGLENVREATL 419


>gi|168209272|ref|ZP_02634897.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170712713|gb|EDT24895.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 429

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 108/333 (32%), Gaps = 37/333 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N+I  S RE+  +  F EI +  +              TE+    +  
Sbjct: 122 RHKKINSIFKVQNIITDSFREFLNKEGFTEIHTPKIVK--EGAEGG----TEVFEVKYFE 175

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
              YL  SP+F  + ++ AG E++F   HA+R  E     H  E+  ++        E  
Sbjct: 176 NKAYLAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYVSMDLEMGFIENEFD 235

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + +    +      +                    I   E       ++L    +   + 
Sbjct: 236 IMNLEENLLKFILNSL------------------RIKGKEY-LELLKVELPVIYEEIPKI 276

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           + +      ++   +   D        ++L +  +  L  +    L  YP  +  +  + 
Sbjct: 277 EFNEAIEILKEQYNKNDLDGDLDPEAEKLLYKYAKEKLNSD-FLFLTNYPRKKRPMYTMP 335

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             +   T  F+L    IE+      + D              K K  N      E +L  
Sbjct: 336 KGEKG-THSFDLLFRGIEITTGGQRIHDYEMLVE------NMKYKGLNPNSY--ESYLEL 386

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
               MP+  G+A+G +R+   + G  N+ E   
Sbjct: 387 FKLGMPKHGGLAIGLERITARILGLENVREATL 419


>gi|227529905|ref|ZP_03959954.1| asparagine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350159|gb|EEJ40450.1| asparagine--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 432

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/348 (15%), Positives = 105/348 (30%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF 62
           +  +  W R    +    +  R+ ++ +  E+F ++ F + D+  L  S P         
Sbjct: 116 LDHRHLWLRSR--KPWALMRIRSRVKLATMEFFDKHGFTQFDAPILTSSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +     YL  S +    +  A    KI+     +R  +     H  EF M+E
Sbjct: 167 TTELFDVKYFDTDAYLSQSGQLY-GEAGAMALGKIYTMGPTFRAEKSKTRRHMTEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +K     +    +                      I             
Sbjct: 226 PEMAWMHQDESLKIQEQYVAYLVQDL--------------------IDHCTQELEMVGRS 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + +     + P   + Y +A +       D  + D F       +      N    +  Y
Sbjct: 266 VESLKPFTELPYPRITYKKAIEMLQEGGFDSKYGDDFGSPEETYLADQ--FNKPVFIMNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P    A       +       ++   ++       E++   E+ + +E    + ++    
Sbjct: 324 PRAIKAFYMPTDPEDDR----QVICADLLAPEGYGEIIGGSERSYDYEYITNKLEENGLS 379

Query: 302 TYPIDE-DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  D L         SG  MG +R +  +T   +I E I  P  
Sbjct: 380 KEDYGWYDDLRKF-GSVPHSGFGMGLERFLSWITLQEHIRENIPFPRM 426


>gi|47459342|ref|YP_016204.1| asparaginyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|59798538|sp|Q6KHD7|SYN_MYCMO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|47458672|gb|AAT27993.1| asparaginyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 447

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/355 (16%), Positives = 120/355 (33%), Gaps = 36/355 (10%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           + +IP     +R      R  +L R+ +   + +++ E  ++ + S  +  +   E    
Sbjct: 116 LREIP--HLRHRTTTL--RAIMLIRSTLALEIHKFYNERGYLWVSSPIITGND-GEGAGE 170

Query: 61  AFSTELIIQDHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
           +F  +   +D    K   L  + +   +        K++ FA  +R        H  EF 
Sbjct: 171 SFVVDDESKDFFFNKKATLGVTGQLHAEAYALG-FSKVYTFAPTFRAENSNTTKHAAEFW 229

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           M+E   A    + L+K   +++R       ++           F +              
Sbjct: 230 MMEPEVAFFDLKDLIKMSDDMLR----QVIKRTVEAHPHEFEFFEK-------NKPGLLK 278

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
           N++L           R  + +  +        +  +    +    + +     I     +
Sbjct: 279 NLNLFLNNKLSILEYREAIKILEKVKDRFEDKNIFFGKDLATEHEKYLAEKH-IQGPVAV 337

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ----E 294
             YP    A       D      ++L    I       E++   ++  R+EK +Q     
Sbjct: 338 INYPKSFKAFYMFQNEDNETVAAYDLLVPGI------GEVIGGSKRETRYEKLVQRVKDL 391

Query: 295 KKKIYNETYPID-EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           K    +  + +D   F    +     +G  +GF+RL+M +TG  NI + I  P +
Sbjct: 392 KINQEDLQWYLDLRRFGQASS-----AGFGLGFERLIMYITGTENIRDTIPFPRT 441


>gi|289750187|ref|ZP_06509565.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|289690774|gb|EFD58203.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis T92]
          Length = 274

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 85/235 (36%), Gaps = 22/235 (9%)

Query: 11  NRDFHYR-----------RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
           + +   R            R  +  R+ +  ++RE      F+E+++  LQ   G  T  
Sbjct: 2   DPEARVRTRYLDLAVNAESRALITARSSVLRAVRETLFAKGFVEVETPILQQLHGGAT-A 60

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F T +   +     L+L+ +PE   K+L   G E++F    A+RN      H PEFT+
Sbjct: 61  RPFVTHI---NTYSMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNPEFTL 117

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV-------NCNPFSEPEYITVAE 172
           LE Y+AH  Y + +  C  +I+ AA+ AN    + +           +     +   +  
Sbjct: 118 LEAYQAHADYLEWVDGCRELIQNAAQAANGAPIAMRPRTDKGSDGTRHHLEPVDISGIWP 177

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
               +  I                L      AG+          +   +    +E
Sbjct: 178 VRTVHDAISEALGERIDADTGLTTLRKLCDAAGVPYRTQWDAGAVVLELYEHLVE 232


>gi|291241692|ref|XP_002740746.1| PREDICTED: CG6796-like [Saccoglossus kowalevskii]
          Length = 482

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/348 (17%), Positives = 107/348 (30%), Gaps = 34/348 (9%)

Query: 12  RDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
                R   F   L  RN     +  YF +N FI I++  +  +       +  F  E+I
Sbjct: 150 PHLRCRTNAFGSLLRVRNAATMLIHSYFQDNSFIHINTPIITSNDCEGAGEL--FKIEVI 207

Query: 68  IQDH-----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
            +          P+YL  S +    + +A+G  K++ F   +R        H  EF M+E
Sbjct: 208 SESEECKHFFDVPVYLTVSGQLQL-EAMASGLSKVYTFGPTFRAENSQTRKHLAEFYMVE 266

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A     Q ++D M I+    +    +I          F +    +  +   +     
Sbjct: 267 AEVAFT---QSLEDIMQIMEGCVKCVTNRIIEQCPHEVELFHKHVAASNHKDLLKKILDK 323

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               +   D  +     +  ++ G          D+ S      +      N    +  Y
Sbjct: 324 TYKRITYSDAIN-----ILQKKKGFEF-PTQWGCDLQSEHEKYLV--KYFNNVPVFVTDY 375

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEMQEKKKIYN 300
           PA           D   T           L     EL     +  R +  +     +   
Sbjct: 376 PACLKPFYARDNQDSPNTVAAV-----DLLMPVIGELFGGSLREERLDVLQNNLTTQGQA 430

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             Y   E +L           G  MGF+R +  + G +NI + I  P 
Sbjct: 431 SEY---EWYLDLRKHGSVPHGGFGMGFERFLQCILGIDNIKDTIPFPR 475


>gi|218295031|ref|ZP_03495867.1| asparaginyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244234|gb|EED10759.1| asparaginyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 438

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 110/349 (31%), Gaps = 35/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R    +  R+ ++  + E+F E  F+  D+  L  S    T      
Sbjct: 115 MDHRHLWLRHR--RPFAVMRIRDELERGIHEFFGERGFLRFDAPILTPSAVEGT------ 166

Query: 64  TELIIQDHIRKP-LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           T+L           YL  S +   +    A   K++ F   +R        H  EF M+E
Sbjct: 167 TDLFEVGLFDGEKAYLSQSGQLYAEAGAMAY-AKVYTFGPTFRAERSKTRRHLLEFWMVE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++E+ M     ++R       +                  + + E   +     
Sbjct: 226 PEVAFMTHEENMALQEELVRYLVGRVLE-------------RRARELEMLERDPKALEPA 272

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                      +   L  +  +  + V     + + F       +  +   +    ++RY
Sbjct: 273 AQGNYPRLTYKEAVALVNRLAEKDLEV-PPLPYGEDFGAPHEAAL--SRQFDRPVFVERY 329

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           PA   +      P DP      +L            E++   ++ H  E   ++ ++   
Sbjct: 330 PARIKAFYMEPDPEDPELVLNDDL-----LAPEGYGEIIGGSQRIHDLELLRRKIREFGL 384

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 E +L          SG  +G +R V  + G +++ E I  P  
Sbjct: 385 PEEVY-EWYLDLRRFGSVPHSGFGLGLERTVAWICGLSHVREAIPFPRM 432


>gi|218709797|ref|YP_002417418.1| asparaginyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|218322816|emb|CAV18993.1| Asparaginyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 466

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 104/356 (29%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          RN +  ++  ++ E  F    +  +  S       +   ST   
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWTSAPLITASDAEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDEGKVDFNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + + K   ++++       ++    +  +   F+          
Sbjct: 244 LAEFWMVEPEVAFADLDDVAKLAEDMLKYVFAAVLEE----RRDDLEFFASRIDKQAITR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ + D           D          +G +   D  W    S      +       
Sbjct: 300 LEQFVDADFAQV-------DYTDAIQILLDSGKKFEFDVEWGIDMSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVIVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGAQREERLDILDE 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +      +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 406 RMIAMGIDPEHMSWYRDLRK-YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|198428712|ref|XP_002119984.1| PREDICTED: similar to asparaginyl-tRNA synthetase 2
           (mitochondrial)(putative) [Ciona intestinalis]
          Length = 471

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 101/353 (28%), Gaps = 36/353 (10%)

Query: 12  RDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFS---- 63
                RR         RN ++    E+F    F  + +  +  S       + +      
Sbjct: 133 PHLRMRRTSMINAFKLRNQLEMLFHEFFQNEGFTHVHTPIITLSDCEGAGELFSIKSDTS 192

Query: 64  TELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFT 118
           T   +++       KP YL  S +    +  A     ++  +  +R        H  EF 
Sbjct: 193 TNTDMENSENHFFNKPAYLTVSGQMHL-EACAMSLGSVYTLSPVFRAEHGISRKHLSEFR 251

Query: 119 MLEWYRAHE-SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           MLE   A      +++    + I+   E                  + +          +
Sbjct: 252 MLEVEVAFTQDLHEILDLIEDSIKFCIERVQSVPLK----------KFDDGYKDIPPQHH 301

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
             +   T  +    P    L +  + +         W D F+      +  + G+    I
Sbjct: 302 KAVKNATCSNYVRIPYSEALEILQKNSHKLTTAAPVWGDDFNTDQESFLVKHFGLTPVFI 361

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKK 296
           ++     +         +        ++    E+C              R E  +   + 
Sbjct: 362 INFPKVAKPFYMYANNDNNTVAAVDLIFPFCGEICGGSLREH-------RLELLQDSLRT 414

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              NE     E +L           G  +GFDRLV  + G  NI + +  P +
Sbjct: 415 SGLNEKDY--EWYLDLRRFGSAPHGGYGLGFDRLVHFLLGTRNIKDAVPFPRT 465


>gi|296411579|ref|XP_002835508.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629292|emb|CAZ79665.1| unnamed protein product [Tuber melanosporum]
          Length = 492

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/354 (17%), Positives = 117/354 (33%), Gaps = 37/354 (10%)

Query: 15  HYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFSTEL 66
           H R+R       L  R+ I S+L  +FVE+ FI+  +  +  S      E         +
Sbjct: 148 HLRQRIPANTNLLHLRSNIISTLTAFFVEHSFIQCHTPIITSSDCEGAGEVFA------I 201

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRA 125
           + +     P YL  S +    + LAA   +++  + ++R  + G   H  EF MLE   A
Sbjct: 202 VPEKFFNTPKYLTVSGQLHL-EALAAAVPRVWTLSPSFRAEKSGTTRHLSEFYMLEVEAA 260

Query: 126 HESY-EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
                + L+    ++++      +      + ++     +       +   R+  +    
Sbjct: 261 FIDTLDPLVALIEDMVKTIVRSISTSRVGKETLSTAGEDK-----AVQLEERWKGLLERP 315

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                       L L A+Q  ++      W           +      N    +  YP  
Sbjct: 316 WSRITYTEAISRLGLAAEQKEVQFDIPAVWGAALQAEHERFL-AQTVFNGPVFVTDYPKS 374

Query: 245 ESALANIYP----ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
                 +        P   +    +     L  A  EL+    + +R+++ + E ++   
Sbjct: 375 LKPFYMLPSVSTVPTPGEGETVACF---DLLVPAVGELIGGSLREYRYDELLTEMRRHGI 431

Query: 301 ETYPIDED------FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 ED      +L        +  G  +G DRLV  + G  NI E    P 
Sbjct: 432 AVGDGGEDEGSLRWYLELRKWGSTRHGGFGLGLDRLVCYLAGVENIREATAFPR 485


>gi|86146279|ref|ZP_01064604.1| asparaginyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85835990|gb|EAQ54123.1| asparaginyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 466

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 104/356 (29%), Gaps = 41/356 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          RN +  ++  ++ E  F    +  +  S       +   ST   
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWTSAPLITASDAEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDEGKVDFNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + + K   ++++       ++    +  +   F+          
Sbjct: 244 LAEFWMVEPEVAFADLDDVAKLAEDMLKYVFAAVLEE----RRDDLEFFASRIDKQAITR 299

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++ + D           D          +G +   D  W    S      +       
Sbjct: 300 LEQFVDADFAQV-------DYTDAIQILLDSGKKFEFDVEWGIDMSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EM 292
              +   YP    A       D +             L     E++   ++  R +  + 
Sbjct: 353 PVIVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGAQREERLDILDE 405

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +      +  +      L         +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 406 RMIAMGIDPEHMSWYRDLRK-YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|156093777|ref|XP_001612927.1| asparagine - tRNA ligase [Plasmodium vivax SaI-1]
 gi|148801801|gb|EDL43200.1| asparagine - tRNA ligase, putative [Plasmodium vivax]
          Length = 584

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 67/412 (16%), Positives = 115/412 (27%), Gaps = 88/412 (21%)

Query: 3   QIPSQPWW---NRDF-HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSL---- 49
            +  +       R+  H R R       +  RN + ++   +F    F+ + +  +    
Sbjct: 187 PLSKKNHGKEFLREVAHLRPRSYFISSVIRVRNALATATHLFFQSRGFLYVHTPLITTSD 246

Query: 50  -------------------------------------------------QYSPGNETHIR 60
                                                              S G +TH  
Sbjct: 247 CEGGGEMFTVTTLLGEDADYGAIPRVRKAVKGGQKREDNVQSAGQSAGQSASVGADTHGA 306

Query: 61  AFSTELIIQ--DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
             +  LI    D   K  +L  S + S +  L +    ++ F   +R        H  EF
Sbjct: 307 PPAQYLIDYKKDFFNKQAFLTVSGQLSLEN-LCSSMGDVYTFGPTFRAENSHTSRHLAEF 365

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
            M+E   A       M+   + I+       +  F             E        +R 
Sbjct: 366 WMIEPEIAFADIYDNMELAESYIKYCIGYVLKNNFDDIYY-------FEENVEKGLISRL 418

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
            NI               LL   + Q  + V     W           +   +      +
Sbjct: 419 RNILDENFAKITYTNVIDLLMPFSNQFEVPVK----WGMDLQSEHERFVAEQIFKKPV-V 473

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +  YP    A       D +     ++    I       +  D +E   +   E    KK
Sbjct: 474 VYNYPKDLKAFYMKLNEDQKTVAAMDVLVPKIGEVIGGSQREDNLELLDKMIVE----KK 529

Query: 298 IYNETYPIDEDF--LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  E+Y     +  L         +G  +GF+RL+MLVTG +NI + I  P 
Sbjct: 530 LNMESY---WWYRQLRKF-GSHPHAGFGLGFERLIMLVTGVDNIKDTIPFPR 577


>gi|219684771|ref|ZP_03539713.1| asparaginyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219671716|gb|EED28771.1| asparaginyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 462

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 100/357 (28%), Gaps = 42/357 (11%)

Query: 12  RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R          RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAIARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QD--------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            +                 K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKPNNSLSNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFCKLNDNISLAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLG 231
           +     I     + N +          A     +   D    W           +   + 
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIAILENSKKIFDIKPCWGIDLQTDHERYLTEEIF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                ++D     ++    I   +        L     E+    +   D  +  +R ++ 
Sbjct: 347 KKPVVVIDYPKNFKAFYMKINKDNKTVKGMDILVPRIGEIIGGSEREDDLQKLENRIKEL 406

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + +    + +D   L         SG  +G +RLV   TG +NI + I  P +
Sbjct: 407 NLNIEHLN---WYLD---LRRF-GSTPHSGFGLGLERLVQYTTGISNIRDSIPFPRT 456


>gi|328865342|gb|EGG13728.1| asparagine-tRNA ligase [Dictyostelium fasciculatum]
          Length = 648

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 104/339 (30%), Gaps = 39/339 (11%)

Query: 17  RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHIRKP 75
           R    +  R++   + R++F +N + E+   +L  +     + +          D    P
Sbjct: 338 RASAIMKMRSLAMKAFRDHFYDNGYFEVTPPTLVNTFCEGGSEL-------FTLDFFGSP 390

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE---SYEQ 131
            YL  S +   + ++       FC A ++R        H  EFT +E             
Sbjct: 391 AYLTQSSQLYLETMIP-VVGDAFCIAQSYRAEASKTRRHLAEFTHIEVESPFIKFDDLLD 449

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            ++  +  +       ++ +    N N      P      E   ++              
Sbjct: 450 RIEFLVCDVAERLFKLDKDLLLTVNPNAKIPERPFMRMNYEEGIKFC------------- 496

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALAN 250
             R     ++++ G+ V  +  + D        K+  N  I       R+P    +    
Sbjct: 497 --RENKIYKSEENGVPVHFE--FGDDIPEAQERKM--NDMIGKPIFFCRFPHEMKAFYMA 550

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             P D R T+  +L    +         +   +Q      +  +K+ +    Y    D  
Sbjct: 551 RCPEDDRLTESTDLLMPGVGEIVGGSMRIANYQQL----MDAYKKEGLDPSQYYWFTD-- 604

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                     G  +GF+R +    G  +I  V   P  +
Sbjct: 605 QRKYGTCPHGGYGLGFERFLTWFLGEEHIRNVCLYPRMR 643


>gi|225011199|ref|ZP_03701659.1| asparaginyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225004660|gb|EEG42622.1| asparaginyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 477

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/382 (14%), Positives = 109/382 (28%), Gaps = 54/382 (14%)

Query: 5   PSQP---WWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           P +    +  ++ H R R       +  R+ +  ++ +YF    F  + +  +  S    
Sbjct: 106 PKKHSLEFLRQNAHLRVRTNTFSAIMRVRSTLSFAVHQYFRSQDFNYVHTPIVTGSDAEG 165

Query: 56  ETHIRAFSTELIIQ---------------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
              +  F    +                 D   K   L  S +   +    A   K++ F
Sbjct: 166 AGEM--FRVSTLDPKNPPLDSNGAIDYREDFFGKETNLTVSGQLEAETYAMA-LGKVYTF 222

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +R        H  EF M+E   A    +  M    + I+   +              
Sbjct: 223 GPTFRAENSNTSRHLAEFWMIEPEMAFYDLDANMDLAEDFIQNVIKYVLTHCQEDLAFLQ 282

Query: 160 NPFSEPEYITVAEAFARYANIDLGTT--------LDNPDQPDRHLLYLQAQQAGIRVAHD 211
               + E        +    ++            L   +  +        ++   +    
Sbjct: 283 ERLLDEEKQKPQNERSEMPLLEKLKFVVDQNFVRLSYTEAIEILQNSTPNKKKKFKYPIT 342

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
               D+ S      +E +    C  IL  YPA   A       D +  +  ++    I  
Sbjct: 343 GWGVDLQSEHERYLVEKH--FKCPVILFDYPADIKAFYMRLNEDKKTVRAMDILFPGIGE 400

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE---DFLACL--TEMPQSSGIAMGF 326
                +  + +E             +       +D     +   L        SG  +GF
Sbjct: 401 IVGGSQREERLEVL-----------EERMSAMGVDHKELWWYKDLRKYGSAVHSGFGLGF 449

Query: 327 DRLVMLVTGANNINEVIWTPFS 348
           +RLV+  TG  NI +VI  P +
Sbjct: 450 ERLVLFTTGMGNIRDVIPFPRT 471


>gi|119497261|ref|XP_001265391.1| aspartyl-tRNA synthetase, cytoplasmic [Neosartorya fischeri NRRL
           181]
 gi|119413553|gb|EAW23494.1| aspartyl-tRNA synthetase, cytoplasmic [Neosartorya fischeri NRRL
           181]
          Length = 948

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/311 (18%), Positives = 107/311 (34%), Gaps = 27/311 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ + +  R    E  FIEI +  LQ +   E+    F       ++  +  +
Sbjct: 279 SQSIFRLQSALCNIFRSSLDEQGFIEIHTPKLQGTA-TESGASVFQV-----NYFGRDAF 332

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +AA  E+++     +R        H  E+T L+   A E +   M D 
Sbjct: 333 LAQSPQLAKQMAIAADFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEMLDV 392

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +           +  +          E +   E        D    L+     D   
Sbjct: 393 LDAVIKNMLKGVYGRYRREIEIVKHQFPSEDVVWLEETPIIRFSDGIKMLNESGWRDED- 451

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                   G  +  DD         L E ++   G +   ILD++P           P D
Sbjct: 452 --------GNPLPEDDDLHTRDEIRLGELVKEKYGTD-YYILDKFPVAARPFYTMPDPED 502

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
           PRFT  F+++    E+ +    + DP     R  +E   +  I  +     ED+L     
Sbjct: 503 PRFTNSFDIFIRGQEIVSGGQRIHDP-----RMLEESMRRSGINPDMM---EDYLEGFRW 554

Query: 315 EMPQSSGIAMG 325
             P  +G  +G
Sbjct: 555 GAPPHAGAGVG 565


>gi|148545090|ref|YP_001272460.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184154423|ref|YP_001842764.1| asparaginyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|166980089|sp|A5VMP9|SYN_LACRD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|226695298|sp|B2GA02|SYN_LACRJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148532124|gb|ABQ84123.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225767|dbj|BAG26284.1| asparaginyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
          Length = 432

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 109/350 (31%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    +    +  R+ ++ +  E+F ++ F + D+  L   +P         
Sbjct: 116 LDNRHLWLRSR--KPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +  +L  S +   +    A   +++     +R  +     H  EF M+E
Sbjct: 167 TTELFETDYFDRSAFLSQSGQLYAEAGAMA-LGRVYTMGPTFRAEKSKTRRHLMEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +K     I    +                      I             
Sbjct: 226 PEMAWMHQDESLKIQEQYIAYLVQDL--------------------IDHCARELEMVGRS 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + +     + P   + Y +A +   +   D  +   F       +           +  Y
Sbjct: 266 VESLKPFTELPYPRITYKEAIEILQKGGFDVEYGADFGSPEETYLADQ--FQKPVFILNY 323

Query: 242 PAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    A      P D R     +L            E++   E+ + +E    + ++   
Sbjct: 324 PKEIKAFYMPEDPEDSRQVICADL-----LAPEGYGEIIGGSERSYDYEYITNKLEENGL 378

Query: 301 ETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                D  +   L        SG  MG +R +  +T  ++I E I  P  
Sbjct: 379 SKE--DYGWYDDLRKYGSIPHSGFGMGLERFLAWITLQDHIRETIPFPRM 426


>gi|310659724|ref|YP_003937445.1| aspartyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308826502|emb|CBH22540.1| aspartyl-tRNA synthetase [Clostridium sticklandii]
          Length = 429

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/336 (14%), Positives = 114/336 (33%), Gaps = 45/336 (13%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
             L  + ++  +  ++ ++N F +I +   +       +++          ++     YL
Sbjct: 128 AVLKVKAVLAQAFSDFLIKNDFTQIFTPKIVAQGTEGGSNL-------FELNYFETKAYL 180

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+F  + ++ AG E++F   H +R        H  E+  L+        E  + +  
Sbjct: 181 AQSPQFYKQIMVGAGFERVFEIGHVYRAESHDTKRHLNEYVSLDVEFGFIQDEYEIMELE 240

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           N +                       +     V    +R   +        P +  +  L
Sbjct: 241 NRL----------------------LDFMMKEVESKCSRELELLGAQLPKVPSEIPKMKL 278

Query: 198 YLQAQQAGIRVAHDDTWSDIF---SRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                    +   +D  +D+     +++ E I+     +    +  YP  +  +  + P 
Sbjct: 279 SEAISILNQKYNLNDLQTDLSPKGEKLISEYIKGEYNSD-FVFITHYPQSKRPMYTM-PY 336

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               T+ F+L    +E+      + D  +           K+ +  E +   +D+L    
Sbjct: 337 GEGETRSFDLLFRGLEITTGGQRIHDYTQLLE-----NIAKRGLSKEQF---KDYLYIFK 388

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             MP   G A+G +R+  ++ G +N+      P  +
Sbjct: 389 YGMPPHGGFAIGLERITSMLLGFDNVRYASAFPRDK 424


>gi|13507991|ref|NP_109940.1| asparaginyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501035|sp|P75521|SYN_MYCPN RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|1674281|gb|AAB96228.1| asparaginyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 455

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 115/346 (33%), Gaps = 36/346 (10%)

Query: 15  HYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFSTELII 68
             R R     +  R+++  ++ +YF +N F+ + S  L  +      ET    F  +   
Sbjct: 126 RVRARTYFAIMKVRSLLSQAIFDYFFKNDFVLVHSPILTSNDCEGAGET----FELKQGK 181

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHE 127
           +    K  YL  S +    +  A   +K+F F   +R  +     H  EF M+E   A  
Sbjct: 182 E-FFNKTTYLTVSGQ-FGAECYAQAFKKVFTFGPTFRAEKSHTSRHLSEFWMIEPEVAFA 239

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
           +    +KD + +I    +   +++        +   +   + + E   +  +      L+
Sbjct: 240 N----LKDLIKLIESTVKTVIKQVMQKAKQELDFLEKQFDVKLMERLKQITSTKNFHVLE 295

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                +       + QA   V  D  +           +      N    +  YP    A
Sbjct: 296 YTKALEILKTAQASGQANFEVQ-DFNFGLDLKTEHERFLCEQHFHNQPVFVINYPKDFKA 354

Query: 248 LANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                 AD R     +L    I E+C   +   +  +   R +               ID
Sbjct: 355 FYMKQNADGRTVGAVDLLFPQIGEICGGSEREGNLEKLVERCQ------------AMQID 402

Query: 307 E----DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 +L         S+G  +GFDRL+  + G  NI + I  P 
Sbjct: 403 TQTLNWYLDMRKWGYFASAGFGLGFDRLLAYICGLENIRDAIPFPR 448


>gi|219276601|ref|NP_001136422.1| asparaginyl-tRNA synthetase, cytoplasmic isoform 1 [Mus musculus]
 gi|193806326|sp|Q8BP47|SYNC_MOUSE RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|148677754|gb|EDL09701.1| asparaginyl-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 559

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+MI    R++F +  + E+ + +L      G  T        L   D+  +  +L
Sbjct: 256 ILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGAT--------LFKLDYFGEEAFL 307

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  EFT +E      ++E L+    
Sbjct: 308 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLE 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +      NP  +P                        D  +    
Sbjct: 367 DLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMN-------------YSDAIEWLKE 413

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      D   +   R++         IN   +L R+P    S      P DP
Sbjct: 414 HDVKKEDGTFYEFGDDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 467

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+             +     E     K++  +        D+      
Sbjct: 468 RLTESVDVLMPNVGEIVGGSMR--SWDSEEILEGY---KREGIDPAPYYWYTDQR----K 518

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 519 YGTCPHGGYGLGLERFLSWILNRYHIRDVCLYPR 552


>gi|111114923|ref|YP_709541.1| asparaginyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123047068|sp|Q0SP63|SYN_BORAP RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|110890197|gb|ABH01365.1| asparaginyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 462

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 99/358 (27%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R   F      R+ I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAVARVRSKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QD--------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            +                 K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKPNNDLGNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNITLAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +     
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIEILESSKKNFEIKPYWGIDLQTEHERFLTEETF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH-RFEK 290
                ++  YP    A       D +  K  ++    I       E  D +++   R ++
Sbjct: 347 KKPV-VVIDYPKNFKAFYMKINKDNKTVKGMDVLVPKIGEIIGGSEREDNLQKLENRIKE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + +D   L         SG  +G +R V   TG +NI + I  P +
Sbjct: 406 LNLSIEHLN---WYLD---LRRF-GSTPHSGFGLGLERFVQYSTGISNIRDSIPFPRT 456


>gi|219275596|ref|NP_081626.2| asparaginyl-tRNA synthetase, cytoplasmic isoform 2 [Mus musculus]
 gi|148677757|gb|EDL09704.1| asparaginyl-tRNA synthetase, isoform CRA_c [Mus musculus]
          Length = 558

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+MI    R++F +  + E+ + +L      G  T        L   D+  +  +L
Sbjct: 255 ILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGAT--------LFKLDYFGEEAFL 306

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  EFT +E      ++E L+    
Sbjct: 307 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLE 365

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +      NP  +P                        D  +    
Sbjct: 366 DLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMN-------------YSDAIEWLKE 412

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      D   +   R++         IN   +L R+P    S      P DP
Sbjct: 413 HDVKKEDGTFYEFGDDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 466

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+             +     E     K++  +        D+      
Sbjct: 467 RLTESVDVLMPNVGEIVGGSMR--SWDSEEILEGY---KREGIDPAPYYWYTDQR----K 517

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 518 YGTCPHGGYGLGLERFLSWILNRYHIRDVCLYPR 551


>gi|238883496|gb|EEQ47134.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 486

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 96/339 (28%), Gaps = 27/339 (7%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ--DHIRKPLYL 78
           FL  R+ ++  L E+F    FI++ +  L  S   E     F  E +        K  YL
Sbjct: 156 FLRLRSHLEFKLMEFFQSRDFIKV-TPPLITSSDCEGAGEVFKIEPLNPKEPFFGKNAYL 214

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +    + LA    + +     +R        H  EF MLE   +H      +    
Sbjct: 215 TVSTQLHL-ECLALALNRAWTLTPCFRAENSNTTRHLSEFWMLEAEISHVDNMDQVTTFT 273

Query: 138 NIIRCAAE---VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
             +        V +       ++     ++    T  E     +      + +   +   
Sbjct: 274 EDMIKFVTRSLVESSHSTELSDLGAGNGNDYLNGTYIEKDVVQSRWSNILSAERWPRMTY 333

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN---- 250
                   +  +       W D         +     I     +  YP  +         
Sbjct: 334 TEAIEYLNKT-LPQDEQLIWGDSLQLKHERLLAEKSPI----FITDYPESQKPFYMLKSA 388

Query: 251 -IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                +P  T    L     EL        D        ++E      +  E     E +
Sbjct: 389 NYNAENPTVTCFDLLVPEFGELAGGSMREHDYQVLLANMKQEN-----MNIEDM---EWY 440

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           L           G  +GF+RL+  + G +N+ ++   P 
Sbjct: 441 LNLRKQGTIPHGGFGLGFERLISYLAGYDNVRDISAFPR 479


>gi|26346633|dbj|BAC36965.1| unnamed protein product [Mus musculus]
          Length = 547

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+MI    R++F +  + E+ + +L      G  T        L   D+  +  +L
Sbjct: 244 ILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGAT--------LFKLDYFGEEAFL 295

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  EFT +E      ++E L+    
Sbjct: 296 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLE 354

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +      NP  +P                        D  +    
Sbjct: 355 DLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMN-------------YSDAIEWLKE 401

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      D   +   R++         IN   +L R+P    S      P DP
Sbjct: 402 HDVKKEDGTFYEFGDDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 455

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+             +     E     K++  +        D+      
Sbjct: 456 RLTESVDVLMPNVGEIVGGSMR--SWDSEEILEGY---KREGIDPAPYYWYTDQR----K 506

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 507 YGTCPHGGYGLGLERFLSWILNRYHIRDVCLYPR 540


>gi|297624001|ref|YP_003705435.1| asparaginyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165181|gb|ADI14892.1| asparaginyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 436

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/347 (16%), Positives = 112/347 (32%), Gaps = 41/347 (11%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTE 65
           +       H +    +  R+ +  ++ ++F E  F+  D+      +    T++  F  +
Sbjct: 120 EHRHLYLRHPKPWAVMRIRDELVRAVHDFFAERGFLRFDAPVFTPNAAEGTTNL--FEID 177

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL-HQPEFTMLEWYR 124
           L  +D      YL  S +   +    A   K++ F   +R  +     H  EF M+E   
Sbjct: 178 LFGED----KAYLSQSGQLYAEAGALA-LGKVYTFGPTFRAEKSKTRKHLLEFWMVEPEV 232

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A+  +E  +K   + +        +                   T  E   R    D+  
Sbjct: 233 AYLEHEGNVKLQEDFVAYLVGRTLET----------------RRTELEILER----DVSR 272

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-A 243
              +       L Y +A            W +         +      +    ++ +P  
Sbjct: 273 LEPSAQGNFPRLSYDEALAKLAEHGEKLPWGEDLGAPHETILGS--LFDRPVFIEAWPTQ 330

Query: 244 PESALANIYPADPRFTKRFELYACNIE--LCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
            ++     Y  DP   K  +L A +    L    + + D    + R E+     +     
Sbjct: 331 AKAFYMQPYEDDPTRVKCSDLIAPDGYGELIGGSERIHDYDLLKRRIEEHGLPLEAF--- 387

Query: 302 TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + +D             SG  +GF+R +  +TGA ++ EVI  P  
Sbjct: 388 AWYLDLR----RYGSVPHSGFGLGFERTLAWITGAQHLREVIPFPRL 430


>gi|294940783|ref|XP_002782881.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
 gi|239895009|gb|EER14677.1| asparaginyl-tRNA synthetase, putative [Perkinsus marinus ATCC
           50983]
          Length = 376

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/366 (14%), Positives = 104/366 (28%), Gaps = 49/366 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFSTE 65
            H R R  L       R+ +  ++  +F+   F  + +  +  +      E        +
Sbjct: 22  AHLRPRTNLIGAVARVRSSLSGAVHAFFMSRDFKYVHTPLITSADCEGAGEMFQVTSLLQ 81

Query: 66  ---------------------------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIF 98
                                         QD   +P YL  S + + +    A    ++
Sbjct: 82  KAEGAHQDVKIDSNTGRFDGYRFPAMFSYKQDFFGRPTYLTVSGQLNVENYACA-LSDVY 140

Query: 99  CFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
            F   +R        H  EF M+E           MK     I+  A        +    
Sbjct: 141 TFGPCFRAENSHTSRHLAEFWMIEPELCFADIHDNMKCAEEFIQHCARHV----LAHCRE 196

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +   F +     + +        +    +   +  D+ L   +  +A      +  W   
Sbjct: 197 DIAFFDKFIEKGLIKR-LENLIAEPFARVSYTEAIDKLLKAQKNGKAKFENT-NIYWGFD 254

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
                   +   +      I+  YPA   A            +  +  A    L     E
Sbjct: 255 LDSEHERYLTEKIYKKPV-IVYNYPAAIKAFYMRANEADED-ESKQTVAAMDILAPLVGE 312

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT--EMPQSSGIAMGFDRLVMLVTG 335
           +     +  R   ++ +KK         D  +   L        +G  +GF+RL+M++TG
Sbjct: 313 VCGGSVREERL--DVLDKKLSDLNMDAEDYWWYRDLRRFGSVPHAGFGIGFERLIMMMTG 370

Query: 336 ANNINE 341
             NI +
Sbjct: 371 VENIRD 376


>gi|310799281|gb|EFQ34174.1| asparaginyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 523

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/393 (15%), Positives = 115/393 (29%), Gaps = 56/393 (14%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--- 52
           +  +P         H R R       L  R+   + L ++F    F++     +  S   
Sbjct: 134 LRTMP---------HLRPRIPLNAAILRLRSEAIAVLTQFFASRSFVQTHPPIITSSDCE 184

Query: 53  PGNETH------IRAFSTELI-------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
              E            +T +             R P YL  S +    + LA     ++ 
Sbjct: 185 GAGEVFNVTTGSAETSTTPMSSGKDKAAGNLFFRSPKYLTVSSQLHL-EALAQSLGDVWT 243

Query: 100 FAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNII------RCAAEVANQKIF 152
            +  +R        H  EF MLE   +       + D +  +            A Q++ 
Sbjct: 244 LSPTFRAERSDTSRHMSEFYMLEAEMSFIDSMDHVMDLVEDMLRSLATGLYKTRAAQELR 303

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
             +       +E + + + +   R+  +    TL  P       + +   + G       
Sbjct: 304 QRRESGQTRTAEDDLVPMEQVERRWLGLMQNPTLKWPRITYADAIRMLQAEQGRFEHKPT 363

Query: 213 TWSDIFSRILIEKIEP-----NLGINCCTILDRYPAPESALANI--YPADPRFTKRFELY 265
               + S       +      + G      +  YP    A       P+     K  +  
Sbjct: 364 WEGGLHSEHEKFLAKSLGATNDPGAYSPVFVTHYPREIKAFYMRRSNPSASISEKSGDTV 423

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----------EDFLACLT- 314
            C   L     E+     + HR E  ++  +     +  +D          + ++     
Sbjct: 424 DCFDLLVPDLCEIAGGSMREHRLEPLLETMQARGMGSPSVDGRGSHSGGDLDWYVDLRRW 483

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 G  +GFDRL+  + G  N+ +V+  P 
Sbjct: 484 GSNPHGGFGLGFDRLLSYLVGVPNVRDVVAFPR 516


>gi|290890625|ref|ZP_06553696.1| hypothetical protein AWRIB429_1086 [Oenococcus oeni AWRIB429]
 gi|290479753|gb|EFD88406.1| hypothetical protein AWRIB429_1086 [Oenococcus oeni AWRIB429]
          Length = 434

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/348 (14%), Positives = 109/348 (31%), Gaps = 44/348 (12%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +    H +    +  R+ I  ++ ++F ++ F+++DS  +   +P         +T
Sbjct: 120 ERHLYL--RHQKPFATMKIRDEIIRAIYDFFHKDGFLKLDSPIITDSAPEG-------TT 170

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWY 123
           EL    +  K  YL  + +   +    A   K++ F   +R  +     H  EF M++  
Sbjct: 171 ELFPVKYFDKDAYLSQTGQLYAEAGAMA-FGKVYDFGPTFRAEKSSTRRHLTEFWMIDAE 229

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A    E  +K     I    E                      +   +   +    D+ 
Sbjct: 230 MAWMHQEDSLKVQERFIAYLIERV--------------------VDNCQVELKMLGQDVE 269

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                   P   + Y    +          W   F       +      N    +  +P 
Sbjct: 270 KLRAYTKLPYPRISYDDTVKLLQDNDFKIEWGVDFGSPEETFLAKR--FNSPFFIVNFPK 327

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIYNE 301
              A           ++   + + ++       E++   E+   ++  K+    + +   
Sbjct: 328 AIKAFYMKRHP----SRDDVVISADMLAPEGYGEIIGGSERDTDYDYLKQQIISQHLDLS 383

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            Y     +L          SG  +G +RL+  + G ++I E I  P +
Sbjct: 384 EY---SWYLDLRKYGTVPHSGFGLGLERLIRFIAGEDHIRETIPFPRT 428


>gi|284054711|ref|ZP_06384921.1| lysyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 296

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 17/152 (11%)

Query: 3   QIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
             P   +   + +   R R                R+ I  S+R Y     F EI++  L
Sbjct: 147 PFPDSYYGINDPELCRRHREIDLVSNSTSLQRFKLRSRIIRSIRTYLWNAGFDEIETPVL 206

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           Q   G     R F T     + +   LYL+ + E   K+ +  G EK+F     +RN   
Sbjct: 207 QSIYGG-VATRPFITH---HNTLDIDLYLRIATELFLKRAVCGGMEKVFEIGRVFRNEGI 262

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
              H PEFT +E Y+A+  Y Q+M    ++I 
Sbjct: 263 DSTHNPEFTSIEVYQAYADYFQIMALVEDLIC 294


>gi|218190024|gb|EEC72451.1| hypothetical protein OsI_05793 [Oryza sativa Indica Group]
          Length = 490

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/338 (14%), Positives = 101/338 (29%), Gaps = 61/338 (18%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  I++  R+  +   F+ I +  L    S G           +   D+  +P 
Sbjct: 200 QAIFRVQCEIENIFRQVLLSEGFVGIHTPKLIGGSSEGGAA--------VFKLDYNGQPA 251

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   +  +  G E++F                                  + D 
Sbjct: 252 CLAQSPQLHKQMAICGGFERVFEVGPCPAQKTPTRTG-----------------ICVCDV 294

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +  +      K  + +    N     + +       R                +   
Sbjct: 295 VDRLFVSMFDHLNKNCAKELEAINRQYPFKPLKYLPKTLRI---------------EYDE 339

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                ++AG+ V      +    + L E +      +   +L RYP+            D
Sbjct: 340 GIRMLKEAGVHVEAMGDLNTESEKKLGELVHTKYDTD-FYMLCRYPSAVRPFYTMPCSDD 398

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFLA 311
           PR++  F+++    E+ +    +  P        ++ +E+         ID      ++ 
Sbjct: 399 PRYSNSFDVFVRGEEIISGAQRVHVP----EVLARQAEER--------GIDVGSIAAYVD 446

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 P   G  +G +R+VML  G  NI +    P  
Sbjct: 447 AFRYGAPPHGGFGVGLERVVMLFCGLGNIRKASLFPRD 484


>gi|160902804|ref|YP_001568385.1| asparaginyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160360448|gb|ABX32062.1| asparaginyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 434

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 109/345 (31%), Gaps = 44/345 (12%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           ++  W R    R+   L  RN I  ++R+++ +N F  ID+     S   E+    F  +
Sbjct: 120 NRHLWIRSR--RQFHILNIRNEILKAIRDFYNQNNFTLIDTPIFTGSI-GESAGNTFKLD 176

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
                     +YL  + +    +  A    K++     +R+ +     H  EF M E   
Sbjct: 177 YFDYG----EVYLAQTGQLYL-EAAAMSFGKVYNLGPTFRSEKSKTRRHLIEFWMNEAEV 231

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A   +E  +K   +++    +   +             ++ + I        Y       
Sbjct: 232 AFYKHEDNIKLQESLVSFIIKRVLENASDDLKEIGRDTNKLQKIQPPFERMTYT------ 285

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-A 243
                            ++ G  V   + +      +L  + E          +++YP  
Sbjct: 286 -----------QAIDFLKKKGFEVEWGEDFGADEESVLASQFEK------PLFVEKYPRK 328

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
            ++        +P      +L            E++       R  +E     ++     
Sbjct: 329 VKAFYMQPDENNPDVVLCDDL-----LAPEGYGEIIGAS---ERIWEESVLIDRLKEFNL 380

Query: 304 PIDE--DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           P+D+   ++          SG  +G +R V  + G  +I E I  
Sbjct: 381 PLDQYQWYIDLRKFGSVPHSGFGLGVERTVAWICGLEHIREAIPF 425


>gi|1169858|sp|P43151|GPA_LEIDO RecName: Full=Putative guanine nucleotide-binding protein subunit
           alpha
 gi|556256|gb|AAA50285.1| G protein alpha subunit [Leishmania donovani]
          Length = 464

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 1/96 (1%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MP 317
           T R        EL NA  EL +PI QR  F K+++ + K  +E+  IDE F+A L   +P
Sbjct: 234 TFRMVDVGGQRELANAHTELNNPIVQREEFVKQLRNRDKGDDESMEIDEGFVAALEHALP 293

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            + G  +G DRLVM +T  +NI EV+  P  +   +
Sbjct: 294 PTGGWGLGIDRLVMFLTSQSNIKEVLLFPAMKPEGK 329


>gi|83314502|ref|XP_730387.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23490096|gb|EAA21952.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 586

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 65/393 (16%), Positives = 104/393 (26%), Gaps = 75/393 (19%)

Query: 3   QIPSQPWW---NRDF-HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +       R+  H R R       +  RN +  S   +F    FI I +  +  S 
Sbjct: 189 PLSKKNHGKEFLREVAHLRPRSYFISSVMRIRNALMLSTHLFFQSRGFICIQTPLITTSD 248

Query: 53  --PGNETHIRAFSTELIIQDHIRKP-------------------------------LYLQ 79
              G E     F+   +  +                                        
Sbjct: 249 CEGGGEM----FTVTTLFNEEGDINSIPKTKKKINNNQIVKREDQNTNELETNNNTNQYI 304

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S + S +  L +    ++ F   +R        H  EF M+E   A       M+    
Sbjct: 305 ISGQLSLEN-LCSSMGDVYTFGPTFRAENSHTSRHLAEFWMIEPEMAFADIYDNMEVAEA 363

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL--DNPDQPDRHL 196
            I+                          I   E       ID    +  DN  +     
Sbjct: 364 YIKYCIRYVLNNN-------------FHDIYYFEENVEKGLIDRLKNILNDNFAKITYTN 410

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                 +          W           I   +      I+  YP    A       D 
Sbjct: 411 AIDLLTKYSNNFEVPIKWGMDLQSEHERFISEQIFKKPV-IVYNYPKDLKAFYMKLNDDN 469

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--T 314
           +     ++    I       +  D +E   +   E    KK+  E+Y     +   L   
Sbjct: 470 KTVAAMDVLVPKIGEVIGGSQREDNLELLDKMINE----KKLNIESY----WWYRQLRKY 521

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                SG  +GF+RL+MLVTG +NI + I  P 
Sbjct: 522 GTHPHSGFGLGFERLIMLVTGVDNIKDTIPFPR 554


>gi|74196771|dbj|BAE43117.1| unnamed protein product [Mus musculus]
          Length = 559

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+MI    R++F +  + E+ + +L      G  T        L   D+  +  +L
Sbjct: 256 ILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGAT--------LFKLDYFGEEAFL 307

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  EFT +E      ++E L+    
Sbjct: 308 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLE 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +      NP  +P                        D  +    
Sbjct: 367 DLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMN-------------YSDAIEWLKE 413

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      D   +   R++         IN   +L R+P    S      P DP
Sbjct: 414 HDVKKEDGTFYEFGDDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 467

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+             +     E     K++  +        D+      
Sbjct: 468 RPTESVDVLMPNVGEIVGGSMR--SWDSEEILEGY---KREGIDPAPYYWYTDQR----K 518

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 519 YGTCPHGGYGLGLERFLSWILNRYHIRDVCLYPR 552


>gi|148677755|gb|EDL09702.1| asparaginyl-tRNA synthetase, isoform CRA_b [Mus musculus]
 gi|148677756|gb|EDL09703.1| asparaginyl-tRNA synthetase, isoform CRA_b [Mus musculus]
          Length = 515

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+MI    R++F +  + E+ + +L      G  T        L   D+  +  +L
Sbjct: 212 ILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGAT--------LFKLDYFGEEAFL 263

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  EFT +E      ++E L+    
Sbjct: 264 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLE 322

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +      NP  +P                        D  +    
Sbjct: 323 DLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMN-------------YSDAIEWLKE 369

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      D   +   R++         IN   +L R+P    S      P DP
Sbjct: 370 HDVKKEDGTFYEFGDDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 423

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+             +     E     K++  +        D+      
Sbjct: 424 RLTESVDVLMPNVGEIVGGSMR--SWDSEEILEGY---KREGIDPAPYYWYTDQR----K 474

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 475 YGTCPHGGYGLGLERFLSWILNRYHIRDVCLYPR 508


>gi|145503091|ref|XP_001437523.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404673|emb|CAK70126.1| unnamed protein product [Paramecium tetraurelia]
          Length = 506

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 49/340 (14%), Positives = 103/340 (30%), Gaps = 39/340 (11%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL----IIQDHIR 73
           ++     ++ I    R++ +E  FIEI +  L            F+T+         +  
Sbjct: 197 KQAIFRVKSGIALLFRQFLIEKGFIEIHTPKLLG----------FNTKNNYCKFKLQYFN 246

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQL 132
              +L  S     +  L A  E++F  + A+R           EF  ++     +     
Sbjct: 247 YQAFLSQSSCKYKQMCLMADFERVFEVSPAFRALHGNTHRELCEFICMDLEMVIKENYTE 306

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + D    +        +K F  +        + + I +     +    D           
Sbjct: 307 LLDLTEELCLFILKGIEKKFDQEIQIIAKQFQFQPIKICYPIIKLTYFD----------- 355

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                    Q+ GI  +    +     + L + ++   G +   +       +++     
Sbjct: 356 ----AIKLLQEVGIVQSPQYYFCITNQKQLGKIVKEKYGTDFFILNRLPRENQNSCIMPC 411

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             DP F   ++ +    E+ +    + DP       E    + K I  +   + +D++  
Sbjct: 412 KVDPNFNLSYKFFLRGEEIASGHQRIHDP-------EHLNNQLKGIGQDAQLL-KDYINS 463

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                    G A G +R + L     NI      P   S 
Sbjct: 464 FRYGSYPHGGCAFGLERFLYLYFDLKNIRNASLFPRDSSR 503


>gi|121703221|ref|XP_001269875.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus clavatus NRRL 1]
 gi|119398018|gb|EAW08449.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus clavatus NRRL 1]
          Length = 958

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 107/310 (34%), Gaps = 27/310 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ + +  R    E  FIEI +  LQ S   E+    F       ++  +  +L
Sbjct: 290 QSIFRIQSALSNIFRSSLDEQGFIEIHTPKLQGSA-TESGASVFQV-----NYFGRDAFL 343

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+ + +  +AA   +++     +R        H  E+T L+   A E +   M + +
Sbjct: 344 AQSPQLAKQMCIAADFGRVYEIGAVFRAENSNTHRHLTEYTGLDLEMAIEEHYHEMLEVL 403

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +           +  +          E +   E        D    L++    D    
Sbjct: 404 DAVIKNILTVVYGRYRKEVEIVKHQFPSEDVVWLEQTPIIRFADGIKMLNDSGWRDED-- 461

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPADP 256
                  G  +  D+         L E ++   G +   ILD++P       A   P DP
Sbjct: 462 -------GNPLPDDEDLHTRDEIRLGELVKEQYGTD-YYILDKFPTGARPFYAMPDPEDP 513

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
           RFT  F+++    E+ +    + DP        +E   +  I  E     +D++      
Sbjct: 514 RFTNSFDIFIRGQEIVSGGQRIHDPHML-----EENMLRWGINPELM---DDYMEGFRWG 565

Query: 316 MPQSSGIAMG 325
            P  +G  +G
Sbjct: 566 APPHAGAGVG 575


>gi|84393011|ref|ZP_00991778.1| asparaginyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84376365|gb|EAP93246.1| asparaginyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 466

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 104/357 (29%), Gaps = 43/357 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL- 66
            H R R          RN +  ++  ++ E  F    +  +  S       +   ST   
Sbjct: 125 AHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGFFWTSAPLITASDAEGAGEMFRVSTLDM 184

Query: 67  ------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   K++ F   +R        H
Sbjct: 185 ENLPRTDEGKVDFNEDFFGKETFLTVSGQLNAEAYACA-LSKVYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A    + + K   ++++       ++         +   + E IT  E 
Sbjct: 244 LAEFWMVEPEVAFADLDDVAKLAEDMLKYVFAAVLEERRDDLEFFASRIDK-EAITRLEQ 302

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F             +  Q D          +G +   D  W    S      +       
Sbjct: 303 F----------VDADFAQVDYTDAIQILLDSGKKFEFDVEWGIDMSSEHERYLAEEHFKA 352

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +   YP    A       D +             L     E++   ++  R +   +
Sbjct: 353 PVIVK-NYPKDIKAFYMRLNDDGKTVAAM------DVLAPGIGEIIGGAQREERLDILDE 405

Query: 294 EKKKI--YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               +    E      D           +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 406 RMIGMGIDPEHMSWYRDLRK--YGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRT 460


>gi|332715976|ref|YP_004443442.1| aspartyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325062661|gb|ADY66351.1| aspartyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 438

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 62/357 (17%), Positives = 125/357 (35%), Gaps = 49/357 (13%)

Query: 6   SQPWWNRDFHYR---RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
            +   +R    R   ++     +  ++ ++RE++ +  F EI S  L  +  +E+    F
Sbjct: 117 EKWLDHRQVSLRYPEQQLVFAVQTTLEEAMREFWKQYGFREIHSPKLMGTA-SESGAEVF 175

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           S +     +     +L  SP+F  +  +A G EK+F     +R        H+ EFT ++
Sbjct: 176 SVK-----YFDTTAFLAQSPQFYKQLAIAGGMEKVFEIGPVFRAEPSFTSRHETEFTSID 230

Query: 122 WYRAHE-SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
              +    + +LM      +  +  V                        AE        
Sbjct: 231 MEISWIKDHHELMDFEQRWLAHSIRVV-----------------------AEIHGPEIEA 267

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT---I 237
             G  +  P  P   + + +A++   ++ H  T  D         +  ++G         
Sbjct: 268 HFGVKVIPPTLPFPQVTFAEAREILSQLGHVLTRQDDLDAEGERILCEHIGAQTGHEFLF 327

Query: 238 LDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK- 295
           +  YPA   +     +   P  TK F+L    +E+               R   + +++ 
Sbjct: 328 ITDYPASGRAFYHMRHEGCPDITKGFDLLWRGLEITTGAQREHRHD----RLVAQAEQRG 383

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            K+   +   D  F       P   G+ +G  R++M +  A +I EV     S++ +
Sbjct: 384 LKLDGLSDYFD--FFRF--GCPPHGGMGVGLGRIMMRLLNAASIREVTL--LSRTPK 434


>gi|295698422|ref|YP_003603077.1| asparaginyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157367|gb|ADD79812.1| asparaginyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 466

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 112/357 (31%), Gaps = 46/357 (12%)

Query: 15  HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           H R R  +       R+ +   +  +  EN ++ + +  +      E   + F    +  
Sbjct: 127 HLRSRTNIIGSISRIRSDLIYFIHSFLKENGYLLVSTPIITTVD-TEKSSKMFCVSSLDL 185

Query: 70  D---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL-H 113
           +                  K  +L  S + + +    +   K++ F   +R        H
Sbjct: 186 NNLPITKLGKIDFSKDFFGKKTFLTVSGQLNLEAYACS-LSKVYSFGPTFRAEPSNTRKH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF MLE   +     +L++   N+++       + I   +  +    S+   I + + 
Sbjct: 245 LAEFWMLELEASFLDLSELIQLSENMLKY----VFKNILENREEDLLFLSKKTGINILKR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             ++   D+     +        +        I            S    + +      N
Sbjct: 301 LEKFIISDIIQVEFHDVIKILSRMENNLSSKLIE--------KDISEKQEKYLTEKY-FN 351

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  +P            D +     +L    +       E++   ++   + K  +
Sbjct: 352 NSIIIKNHPKGIKPFYMKLNEDQKTVASMDLLIPPL------GEIIGGSQREEIYSKICK 405

Query: 294 -EKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             K+K   +     E +L          SG  +GF+RLV   TG  N+ EVI  P +
Sbjct: 406 NMKEKGIKKKNY--EWYLDLRRYGTVPHSGFGLGFERLVAYTTGMKNVREVIPFPRT 460


>gi|297802054|ref|XP_002868911.1| hypothetical protein ARALYDRAFT_490730 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314747|gb|EFH45170.1| hypothetical protein ARALYDRAFT_490730 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 93/313 (29%), Gaps = 37/313 (11%)

Query: 41  FIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIF 98
            +EI +  L    S G     R         D+  +P  L  SP+   +  +     ++F
Sbjct: 218 VLEIHTPKLMAGSSEGGSAVFR--------LDYKGQPACLAQSPQLHKQMAICGDMRRVF 269

Query: 99  CFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
                +R  +     H  EF  L+               + +          ++F F   
Sbjct: 270 EVGPVFRAEDSFTHRHLCEFVGLDVE-----------MEIRMHYSEIMDLVGELFPFIFT 318

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
                   E     E+  +         L    +          ++AG  V      +  
Sbjct: 319 KIEERCPKE----LESVKKQYPFQSLKFLPQTLRLTFAEGIQMLKEAGEEVDPLGDLNTE 374

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACD 276
             R L + +          +L RYP          Y  D  ++  F+++    E+ +   
Sbjct: 375 SERKLGQLVLEKYKTE-FYMLHRYPLAVRPFYTMPYENDSNYSNSFDVFIRGEEIMSGAQ 433

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTG 335
            + DP     R  +   + K I          ++       P   G  +G +R+VML+  
Sbjct: 434 RIHDPELLEKRARECCIDVKTI--------STYIDAFRYGAPPHGGFGVGLERVVMLLCA 485

Query: 336 ANNINEVIWTPFS 348
            NNI +    P  
Sbjct: 486 LNNIRKTSLFPRD 498


>gi|12044965|ref|NP_072775.1| asparaginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|255660134|ref|ZP_05405543.1| asparaginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351167|sp|P47359|SYN_MYCGE RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|3844702|gb|AAC71331.1| asparaginyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078636|gb|ABY79254.1| asparaginyl-tRNA synthetase [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 456

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/347 (18%), Positives = 119/347 (34%), Gaps = 32/347 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH-IRAFST 64
            H R R       +  R+++  ++ EYF +N FI + S  L  +      ET  I+   T
Sbjct: 124 AHLRVRAKTYFAVMKIRSVLSHAIFEYFFKNDFILVQSPILTSNDCEGAGETFVIKDSET 183

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWY 123
                    K  +L  S +F  +    A  +K+F F   +R  +     H  EF M+E  
Sbjct: 184 ------FFNKTTFLTVSGQFGAEAFAQA-FKKVFTFGPTFRAEKSHTNRHLSEFWMIEPE 236

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A  + + LM+   N+I+       +K+    +   N  ++     +        +    
Sbjct: 237 IAFANLKDLMQLIQNLIK----FLIKKVMENASDELNVLAKQFSNDIISNLKTIISTKKF 292

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
             ++              ++    + +D ++           +      N    +  YP 
Sbjct: 293 PIIEYSKALAILKESSDTKKTNFEL-NDFSFGIDLKTEHERFLCEQYFQNQPLFVINYPK 351

Query: 244 PESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
              A       D +     +L    I E+C   +   D  + ++R +    + K +    
Sbjct: 352 ELKAFYMKTNTDNKTVAAVDLLLPKIGEICGGSERESDLNQLKNRCQSLNIDTKSLN--- 408

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +L         S+G  +GFDRL+  + G  NI + I  P  
Sbjct: 409 -----WYLDMRKWGYFASAGFGLGFDRLLAYICGLENIRDAIPFPRV 450


>gi|255078574|ref|XP_002502867.1| predicted protein [Micromonas sp. RCC299]
 gi|226518133|gb|ACO64125.1| predicted protein [Micromonas sp. RCC299]
          Length = 631

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 81/300 (27%), Gaps = 22/300 (7%)

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
            + G +    A       +D   KP YL  S + + +    A  + ++ F   +R     
Sbjct: 344 AAAGGDIPRDAAGAVDYGKDFFGKPSYLTVSGQLNAEIYACAMRD-VYTFGPTFRAENSN 402

Query: 111 C-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   A    +  M      ++       +                E   
Sbjct: 403 TSRHLAEFWMVEPELAFADLQDDMDCAEAYLKHCLTHVLEHCDEDLEF-------FEKNI 455

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +           +        +     L+A++   +      W           +   
Sbjct: 456 SKDNLRERLRGVATSDFARITYTEAVDHVLKAKK---KFEFPVEWGCDLQSEHERYLTEE 512

Query: 230 LGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +  N   I+  YP    A                 L     EL               R 
Sbjct: 513 VFKNRPVIVRDYPKAVKAFYMRENDDGKTVAAMDVLVPKVGELMGGSQREERLDVLERRI 572

Query: 289 EKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E+   EK+            +L          +G  +GF+RLV  VTG  NI +VI  P 
Sbjct: 573 EEVGLEKESY--------WWYLDLRRYGSVPHAGFGLGFERLVQYVTGVENIRDVIPFPR 624



 Score = 43.5 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 17/44 (38%), Gaps = 5/44 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            H R R          RN +  +   +F ++ F  +++  +  S
Sbjct: 210 AHLRPRTNTIGAVTRVRNQLAYATHTFFQQHGFQYVNTPIVTAS 253


>gi|68487983|ref|XP_712150.1| hypothetical protein CaO19.6698 [Candida albicans SC5314]
 gi|68488034|ref|XP_712125.1| hypothetical protein CaO19.13990 [Candida albicans SC5314]
 gi|77023052|ref|XP_888970.1| hypothetical protein CaO19_6698 [Candida albicans SC5314]
 gi|46433493|gb|EAK92931.1| hypothetical protein CaO19.13990 [Candida albicans SC5314]
 gi|46433520|gb|EAK92957.1| hypothetical protein CaO19.6698 [Candida albicans SC5314]
 gi|76573783|dbj|BAE44867.1| hypothetical protein [Candida albicans]
          Length = 489

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/341 (14%), Positives = 95/341 (27%), Gaps = 28/341 (8%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH-IRAFSTELIIQDHIRKPL 76
           FL  R+ ++  L E+F    FI++    +  S      E   I   +     +    K  
Sbjct: 156 FLRLRSHLEFKLMEFFQSRDFIKVTPPLITSSDCEGAGEVFKIEPLNDNNPKEPFFGKNA 215

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
           YL  S +    + LA    + +     +R        H  EF MLE   +H +    +  
Sbjct: 216 YLTVSTQLHL-ECLALALNRAWTLTPCFRAENSNTTRHLSEFWMLEAEISHVNNVDQVTT 274

Query: 136 CMNIIRCAAEVA---NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
               +      +   +       ++     ++    T  E     +      + +   + 
Sbjct: 275 FTEDMIKFVTKSLVESSHSTELSDLGAGNGNDYLNGTYIEKDVVQSRWSNILSAERWPRM 334

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-- 250
                     +  +       W D         +     I     +  YP  +       
Sbjct: 335 TYTEAIEYLNKT-LPQDEQLIWGDSLQLKHERLLAEKSPI----FITDYPESQKPFYMLK 389

Query: 251 ---IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                  +P       L     EL        D        ++E      +  E     E
Sbjct: 390 SANYNAENPTVACFDLLVPEFGELAGGSMREHDYQVLLANMKQEN-----MNIEDM---E 441

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +L           G  +GF+RL+  + G +N+ ++   P 
Sbjct: 442 WYLNLRKQGTIPHGGFGLGFERLISYLAGYDNVRDISAFPR 482


>gi|216263861|ref|ZP_03435855.1| asparaginyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215979905|gb|EEC20727.1| asparaginyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 462

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 99/358 (27%), Gaps = 44/358 (12%)

Query: 12  RDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
                R   F      RN I   + EYF +N F  I++  +  +   E     F    + 
Sbjct: 122 PHLRIRTNTFGAVARVRNKISYKIHEYFQKNGFFYINTPIITSND-GEGAGEMFRVSTLK 180

Query: 69  QD--------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
            +                 K  +L  + +   +    A   KI+ F   +R        H
Sbjct: 181 FNKPNNDLGNIDFKDDFFGKEAFLSVTGQLHGEAYAMA-LSKIYTFGPTFRAENSNTTRH 239

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       +    ++++        +               + +   E 
Sbjct: 240 ASEFWMIEPEMAFYKLNDNITLAEDLLKYLLSSILNECS-------------QDMDFLEN 286

Query: 174 FARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     I         N +           + +         W           +     
Sbjct: 287 YIEKGLIKKLENVINSNFEVITYTKAIEILESSKKNFEIKPYWGIDLQTEHERFLTEETF 346

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH-RFEK 290
                ++  YP    A       D +  K  ++    I       E  D +++   R ++
Sbjct: 347 KKPV-VVIDYPKNFKAFYMKINKDNKTVKGMDVLVPKIGEIIGGSEREDNLQKLENRIKE 405

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +    + +D   L         SG  +G +R V   TG +NI + I  P +
Sbjct: 406 LNLNIEHLN---WYLD---LRRF-GSTPHSGFGLGLERFVQYSTGISNIRDSIPFPRT 456


>gi|296110412|ref|YP_003620793.1| asparagine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295831943|gb|ADG39824.1| asparagine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 444

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 108/349 (30%), Gaps = 46/349 (13%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +    H +    L  RN + ++  E+F    F ++DS  L   +P         +T
Sbjct: 130 ERHLYL--RHLKPFATLKIRNTLIAATYEFFNREGFTKLDSPLLTGSAPEG-------TT 180

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           +L   D+  +P +L  + +   +    A   K+F F   +R  +     H  EF M+E  
Sbjct: 181 DLFETDYFGEPAFLSQTGQLYAEAGAMA-FGKVFTFGPTFRAEKSKTRRHLTEFWMIEPE 239

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A    EQ ++     I                           +   E        D  
Sbjct: 240 MAFMHQEQSLEVQERYISFLISKV--------------------LENNEQELDILERDKD 279

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                 + P   + Y  A +       D  W   F       +  +        +  +P 
Sbjct: 280 LLRSYTELPYPRVSYDDAIKLLQDNGFDVEWGVDFGSPEETFLANHFA--KPVFIVNFPK 337

Query: 244 PE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIYN 300
              +     +P         +L            E++   E+   ++  K+  E + +  
Sbjct: 338 AIKAFYMKRHPTRQDVVISADL-----LAPEGYGEIIGGSERDTDYDYLKQRIEAEGLSL 392

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E Y     +L          SG  +G +R+V  VTG  +I E I  P  
Sbjct: 393 EEYN---WYLDLRRFGSVPHSGFGLGLERMVTFVTGEEHIREAIPFPRM 438


>gi|226355897|ref|YP_002785637.1| aspartyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226317887|gb|ACO45883.1| putative Aspartate--tRNA ligase (Aspartic acid translase)
           [Deinococcus deserti VCD115]
          Length = 429

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/341 (16%), Positives = 106/341 (31%), Gaps = 40/341 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              + R  L  +  + ++ R++ +   F EI +  +  +      ++          D+ 
Sbjct: 123 RGLKERAALKVQAELVAAFRDHLMTEGFTEISTPKIVSAGAEGGANLFPI-------DYF 175

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P YL  SP+   K+++    E++F  A  +R  E     H  E+  L+        E+
Sbjct: 176 GQPAYLAQSPQLY-KQIMVGVFERVFEVAPVYRAEEHATSRHLNEYLSLDVEMGFIEDEE 234

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +    N +  A     ++    +                                 P  
Sbjct: 235 DVMALENRLLAAIMTRLRERCETEFSLLGASIP------------------DVPAHIPRI 276

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  L  ++ G  V           R+L +      G +    + +YP         
Sbjct: 277 TLLDARQLVGEKYGHPVG-GKDLDPEAERLLCQHYAETEGSD-FVFVTKYPRAARPFYA- 333

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY-PIDEDFL 310
           +P +   T+ F+L    IE+ +    + D                K+  ET     E F 
Sbjct: 334 HPDEGDLTRGFDLLFRGIEITSGGQRIHDHAMLME-----SIAAYKLNPETLTGYTEVF- 387

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                MP   G A+G +RL   + G +N+      P  +  
Sbjct: 388 --KYGMPPHGGFAIGAERLTAKLLGISNVRYARAFPRDRHR 426


>gi|328716490|ref|XP_001950701.2| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Acyrthosiphon pisum]
          Length = 424

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 50/334 (14%), Positives = 110/334 (32%), Gaps = 35/334 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           +       ++    RE      F+EI          GN        T +    + +   Y
Sbjct: 116 QAIFRLEAVVCKFFREILTAKGFVEIFPPRIKNAVTGNG-------TNVFKISYFKGSAY 168

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L   P F     +A   E++F     +R  +     H  EFT L      + +   + D 
Sbjct: 169 LAQCPTFHNIIAIAGDFERVFTIGPVFRPEDSNSHRHLTEFTNLNLEMTFKHHYHEVVDV 228

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           +  +  +     ++ +  +                       +++    LD P + +  +
Sbjct: 229 IASLFTSIFKGLRENYQSEIKTICEQY---------------SVEPFKFLDPPLKLEFPM 273

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                ++ G+ +  +D  S    ++L   ++     +   ILD++P    +   +   D 
Sbjct: 274 AVNMLRENGVEMGDEDDLSIPNEKLLGRLVKAKYDTD-FYILDKFPLAIRSFETMPDPDS 332

Query: 257 RF-TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           +  +  ++++    E+      + D      R      +  ++  E +     +L     
Sbjct: 333 KVGSNSYDMFMRGEEVLTGGQRIHDYHYLMKR-----AKHCQVDIEKFAY---YLDAFRY 384

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             P  +G  +G +R+VML  G +NI      P  
Sbjct: 385 GCPPLAGGGIGLERVVMLYLGLDNIRIASMFPRD 418


>gi|330469417|ref|YP_004407160.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328812388|gb|AEB46560.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 428

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 96/320 (30%), Gaps = 42/320 (13%)

Query: 32  LREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
            R     ++F+EI +  +  S   E+    F       D   +P YL  SP+F  K+L+ 
Sbjct: 142 FRATLDAHRFVEIHTPKVVAS-STESGANVF-----ALDWFGRPAYLAQSPQFY-KQLMV 194

Query: 92  AGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK 150
              E+++     +R        H  ++T L+      +  + +     ++R         
Sbjct: 195 GVVERVYEVGPVFRAEPHDTVRHLAQYTSLDAELGFITDHRDVM---AVLRDTLAGMLDT 251

Query: 151 IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH 210
           +                +T  +  A+   +     L     P        A +  +    
Sbjct: 252 VVDMAGAALATLG----VTPPQVPAQIPEVHFTEALRIAGAPADEPDLAPAHERALGEWA 307

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNI 269
                  F                   +  YP  +     +  PA P ++  F+L    +
Sbjct: 308 RREHGSDF-----------------VFVTGYPMAKRPFYTHPDPARPDYSNGFDLLFRGL 350

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDR 328
           EL      L        R    +           P    ++      MP   G A+G +R
Sbjct: 351 ELVTGGQRLH-------RHADYLTALAARGEPVEPY-AGYVDAFRHGMPPHGGFAIGLER 402

Query: 329 LVMLVTGANNINEVIWTPFS 348
            V  +TG  NI EV   P  
Sbjct: 403 FVSRLTGTPNIREVTPFPRD 422


>gi|50302869|ref|XP_451372.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640503|emb|CAH02960.1| KLLA0A08426p [Kluyveromyces lactis]
          Length = 554

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 46/354 (12%), Positives = 104/354 (29%), Gaps = 53/354 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            +  R  +  S+R  + E    E++   +      G  T 
Sbjct: 230 DPSILLDQRHLMLRGETLSAVMKVRAALMKSIRRVYDEEGLTEVNPPCMVQTQVEGGST- 288

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   D+  +  +L  S +   +  LAA    ++C   ++R  +     H  E+
Sbjct: 289 -------LFKLDYYGEEAFLTQSSQLYLETCLAA-LGDVYCIQESFRAEKSHTRRHLSEY 340

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E       ++ L+     +I    +   +   +                      + 
Sbjct: 341 THIEAELCFLDFDDLLSHIERVITKTIQYVLEDPVAG------------------PLVKK 382

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD--TWSDIFSRILIEKIEPNLGINCC 235
            N +         + +        ++ GI+   D    + D  +     K+   +G+   
Sbjct: 383 LNPNFQAPQLPFKRMEYKDAIEWLKEHGIKNEEDKEFQFGDDIAEAAERKMTDTIGV--P 440

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            +L R+P    S        D R T+  ++    +         +D  E     E     
Sbjct: 441 ILLTRFPLEIKSFYMKRCDDDKRVTESVDVLMPTVGEITGGSMRIDDTE-----ELMAGF 495

Query: 295 KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           K++  +        F+           G  +G +R++  +     + +    P 
Sbjct: 496 KREGIDPAPYY--WFIDQRKYGTCPHGGYGLGTERILAWLCDRFTVRDCSLYPR 547


>gi|322692331|gb|EFY84252.1| aspartate-tRNA ligase [Metarhizium acridum CQMa 102]
          Length = 480

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 51/347 (14%), Positives = 108/347 (31%), Gaps = 44/347 (12%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
                 + +   + E+   N F  I +   +  +   +        E     +  K  +L
Sbjct: 154 AIFKLHSSMCQLIVEFLCSNGFHWIHTPRIITATIPGD-------NEYFHLPYFGKDAWL 206

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNG---EQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             S +   +  L+   +++F     +R      +   H  EFT+L+   A +     + +
Sbjct: 207 AQSSQHHKQMALSMDMQRVFEIGPVFRAEVKSTKSTRHMTEFTVLDIAMAFQDDYHEVVE 266

Query: 136 CMNIIRCAAEVANQKIFSFQN-----VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +  +        Q+   ++          P + P  I + E                P 
Sbjct: 267 LIESMLVFVFRGLQEREQYKQLVEAVQKLYPCARPFRIGLDEHGK------------VPR 314

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE--PNLGINCCTILDRYPAPESAL 248
                   +  ++ G+       ++D     L       P+LG      +D+YPA     
Sbjct: 315 ITFLEAKRILREELGLESDDGKNFTDQEEAALGRYFRESPHLGSTDVFTIDQYPASMRQF 374

Query: 249 ANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK-----IYNET 302
            +   P  P  +  ++      E+C+    +    E           +       +  E 
Sbjct: 375 NSQANPDAPGLSNTWDTIVGGREICSGSQRINSYDELCE------AMRAGVCGPPLDPEA 428

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + +LA     MP+  G  +G +RL+    G +++ EV   P  
Sbjct: 429 EKW-QPYLAAFKSGMPRHGGCGLGVNRLLQGFLGLDDVREVTLFPRD 474


>gi|269986727|gb|EEZ93007.1| aspartyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 429

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 48/338 (14%), Positives = 105/338 (31%), Gaps = 37/338 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
              +       ++ + +++ ++F +  F +I S   +  +         F        + 
Sbjct: 120 RKPKTAAIFKIQSTVSNAITKFFEDQGFYQIHSSKIISQATEG--GANVFQV-----LYF 172

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTMLEWYRAHESYEQ 131
            K  +L  SP+F  + ++AAG EK+F     +R        H  E+T ++   +     +
Sbjct: 173 DKTAFLAQSPQFYKQMMMAAGFEKVFEIGPVFRAEPHHTSRHLTEYTSVDLEMSFIKSYE 232

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +   M  +                         E     +       I L        +
Sbjct: 233 DVMSVMEKLILRIFK-------------------EVRERNKNDLELYGIKLDDPQVPFPR 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                     ++ G ++  D        RI+ + ++     +    L  +P   +   ++
Sbjct: 274 ITIKEASEILKKYGNKLKDDGDIDPEGERIMGQYVKEKYNSD-FFFLTEFPWSIAQFYHM 332

Query: 252 YPADP-RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
              D    T R +L    +E+                   +++EK  +  E +    DF 
Sbjct: 333 KKEDNKEVTNRADLIYKGLEITTLAQREHRYDV----LISQLKEKN-LDPEKFKFYTDFF 387

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +P   G   G +R+V  +    N+ E    P +
Sbjct: 388 R--YGVPPHGGSGTGLERIVKQMLNLENVAEATLLPRT 423


>gi|46198664|ref|YP_004331.1| asparaginyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|59798550|sp|Q72KF7|SYN_THET2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|46196287|gb|AAS80704.1| asparaginyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 438

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 112/349 (32%), Gaps = 35/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAF 62
           +  +  W R    R    +  R+ ++ ++ E+F E  F+  D+  L  S     T +  F
Sbjct: 115 MDHRHLWLRHR--RPFAVMRIRDELERAIHEFFGERGFLRFDAPILTPSAVEGTTEL--F 170

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             EL       +  YL  S +   +    A   K++ F   +R        H  EF M+E
Sbjct: 171 EVELFD----GEKAYLSQSGQLYAEAGALA-FAKVYTFGPTFRAERSKTRRHLLEFWMVE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++E+ M     ++         +  S +        +         +AR    +
Sbjct: 226 PEVAFMTHEENMALQEELVSFLVARVL-ERRSRELEMLGRDPKALEPAAEGHYARLTYKE 284

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               ++   Q D  +                 + + F       +  +   +    ++RY
Sbjct: 285 AVALVNRIAQEDPEV-------------PPLPYGEDFGAPHEAAL--SRRFDRPVFVERY 329

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           PA   +      P DP      +L            E++   ++ H  E   ++ ++   
Sbjct: 330 PARIKAFYMEPDPEDPELVLNDDL-----LAPEGYGEIIGGSQRIHDLELLRRKIQEFGL 384

Query: 301 ETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                D    L         SG  +G +R V  + G  ++ E I  P  
Sbjct: 385 PEEVYDWYLDLRRF-GSVPHSGFGLGLERTVAWICGLAHVREAIPFPRM 432


>gi|289741901|gb|ADD19698.1| mitochondrial asparaginyl-tRNA synthetase [Glossina morsitans
           morsitans]
          Length = 461

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 58/366 (15%), Positives = 105/366 (28%), Gaps = 59/366 (16%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH----- 58
           +    R    R    +  R+  Q +L ++  ++ FI I++  L  +      E       
Sbjct: 123 EYLHLRSRTSRTAAIMRLRHKTQMALHKFMDKHDFIHINTPILTTNDCEGAGEVFTVQPD 182

Query: 59  --------IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
                    R      + Q +    +YL  S +    + ++ G    +  + A+R     
Sbjct: 183 SDELLKQMSRPPV--PLSQSYFDSKVYLTVSGQLHL-ESMSYGLGNTYTISPAFRAENCK 239

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
             LH  EF M E         + +   +  +  +      K        C         T
Sbjct: 240 SPLHLSEFYMFEAELVFIENLEELCRFIEKMIKSVTNDILKFSEADIQYCQN------QT 293

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           V E F      D    L   +  D  L   +  +  ++     +       +   K    
Sbjct: 294 VGENFNLQWLRDTWQILSYDEASDIILRNKEKFKTAVKSNEGFSKEQELFLVDYCKA--- 350

Query: 230 LGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHR 287
                   +  +PA +          D       +L    + ELC       D    +  
Sbjct: 351 -----PVFVINWPAAQKPFYMKISREDSSKVYALDLLMPVVAELCGGSLRECDVNRLQEH 405

Query: 288 ------FEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINE 341
                  E  ++ +K                      + G  MGF+R + L+TG  NI +
Sbjct: 406 PHFPQGLEWYLELRKFGGL-----------------PTGGFGMGFERFLQLLTGVKNIRD 448

Query: 342 VIWTPF 347
           VI  P 
Sbjct: 449 VIPFPR 454


>gi|330723313|gb|AEC45683.1| asparaginyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 446

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 115/343 (33%), Gaps = 27/343 (7%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
               +R    R  +  R+ +   + EYF ++ F+ + S  +  +   E    AF  +   
Sbjct: 119 PHIRHRTKLFRAVMRIRSTLAFEIHEYFRKHDFLYLSSPIITSND-GEGAGEAFVVDNEE 177

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE 127
           +D   K   L  + +   +       +K++ FA  +R        H  EF M+E   +  
Sbjct: 178 KDFFNKKATLGVTGQLHAEAYALG-FQKVYTFAPTFRAERSNTKKHAAEFWMIEPEVSFY 236

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
             + ++    ++++       +            F +     + E   ++ N       +
Sbjct: 237 KLKDIIHLGDSLLK----TVIKNTIKKHPAEFEYFQKNIDANLVEKLQQFYN-------N 285

Query: 188 NPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
                +        ++   +    D  +           +   +      I+  YP    
Sbjct: 286 KLTILEYRQAIEILKKNKAKFEFQDIEFGTDLKTEHERFLAEEVVKGPVAIV-NYPKEIK 344

Query: 247 ALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           A       D +    F+L    I EL       +   +   R +    E++   +  + +
Sbjct: 345 AFYMHQNDDGQTVAAFDLLVPGIGELIGGSQREVRYDKLFQRLKDLNMEQE---DLQWYL 401

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           D   L        S+G  +GF+RL+M VTG +NI + I  P +
Sbjct: 402 D---LRKF-GNYSSAGFGLGFERLIMYVTGVDNIRDSIPYPRT 440


>gi|312869229|ref|ZP_07729401.1| asparagine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311095250|gb|EFQ53522.1| asparagine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 432

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 106/348 (30%), Gaps = 40/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    +    +  R+ ++ +  E+F ++ F + D+  L   +P         
Sbjct: 116 LDHRHLWLRSR--KPWALMRIRSRVKLATMEFFNKHGFTQFDAPILTGSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +  YL  S +    +  A    +I+     +R  +     H  EF M+E
Sbjct: 167 TTELFETDYFDRSAYLSQSGQLY-GEAGAMALGRIYTMGPTFRAEKSKTRRHLMEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    E+  +     +    +                      I             
Sbjct: 226 PEMAWCHEEESEEIQEQYVAYLIQDL--------------------IDNCPLELEMVGRS 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + +     + P   + Y +A     +   D  + D F       +           +  Y
Sbjct: 266 VESLKPFTELPYPRITYKEAIDMLQKGGLDVKYGDDFGSPEETYLADQ--FQKPVFIKNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P    A       +       ++   ++       E++   E+ + ++    + ++    
Sbjct: 324 PKEIKAFYMPTDPEDDR----QVICADLLAPEGYGEIIGGSERSYDYDYITSKLEENGLS 379

Query: 302 TYPIDE-DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  D L         SG  MG +R +  VT  ++I E I  P  
Sbjct: 380 KENYGWYDDLRK-YGSVPHSGFGMGLERFLSWVTLQDHIRENIPFPRM 426


>gi|55980677|ref|YP_143974.1| asparaginyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|66774175|sp|P54263|SYN_THET8 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|55772090|dbj|BAD70531.1| asparaginyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 438

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 111/349 (31%), Gaps = 35/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAF 62
           +  +  W R    R    +  R+ ++ ++ E+F E  F+  D+  L  S     T +  F
Sbjct: 115 MDHRHLWLRHR--RPFAVMRIRDELERAIHEFFGERGFLRFDAPILTPSAVEGTTEL--F 170

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             EL       +  YL  S +   +    A   K++ F   +R        H  EF M+E
Sbjct: 171 EVELFD----GEKAYLSQSGQLYAEAGALA-FAKVYTFGPTFRAERSKTRRHLLEFWMVE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++E+ M     ++         +  S +        +         + R    +
Sbjct: 226 PEVAFMTHEENMALQEELVSFLVARVL-ERRSRELEMLGRDPKALEPAAEGHYPRLTYKE 284

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               ++   Q D  +                 + + F       +  +   +    ++RY
Sbjct: 285 AVALVNRIAQEDPEV-------------PPLPYGEDFGAPHEAAL--SRRFDRPVFVERY 329

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           PA   +      P DP      +L            E++   ++ H  E   ++ ++   
Sbjct: 330 PARIKAFYMEPDPEDPELVLNDDL-----LAPEGYGEIIGGSQRIHDLELLRRKIQEFGL 384

Query: 301 ETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                D    L         SG  +G +R V  + G  ++ E I  P  
Sbjct: 385 PEEVYDWYLDLRRF-GSVPHSGFGLGLERTVAWICGLAHVREAIPFPRM 432


>gi|1004327|emb|CAA62491.1| asparaginyl-tRNA synthetase [Thermus thermophilus]
          Length = 438

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 111/349 (31%), Gaps = 35/349 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAF 62
           +  +  W R    R    +  R+ ++ ++ E+F E  F+  D+  L  S     T +  F
Sbjct: 115 MDHRHLWLRHR--RPFAVMRIRDELERAIHEFFGERGFLRFDAPILTPSAVEGTTEL--F 170

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             EL       +  YL  S +   +    A   K++ F   +R        H  EF M+E
Sbjct: 171 EVELFD----GEKAYLSQSGQLYAEAGALA-FAKVYTFGPTFRAERSKTRRHLLEFWMVE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++E+ M     ++         +  S +        +         + R    +
Sbjct: 226 PEVAFMTHEENMALQEELVSFLVARVL-ERRSRELEMLGRDPKALEPAAEGHYPRLTYKE 284

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               ++   Q D  +                 + + F       +  +   +    ++RY
Sbjct: 285 AVALVNRIAQEDPEV-------------PPLPYGEDFGAPHEAAL--SRRFDRPVFVERY 329

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           PA   +      P DP      +L            E++   ++ H  E   ++ ++   
Sbjct: 330 PARIKAFYMEPDPEDPELVLNDDL-----LRPEGYGEIIGGSQRIHDLELLRRKIQEFGL 384

Query: 301 ETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                D    L         SG  +G +R V  + G  ++ E I  P  
Sbjct: 385 PEEVYDWYLDLRRF-GSVPHSGFGLGLERTVAWICGLAHVREAIPFPRM 432


>gi|304373066|ref|YP_003856275.1| Putative asparaginyl-trna synthetase protein [Mycoplasma hyorhinis
           HUB-1]
 gi|304309257|gb|ADM21737.1| Putative asparaginyl-trna synthetase protein [Mycoplasma hyorhinis
           HUB-1]
          Length = 446

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 115/343 (33%), Gaps = 27/343 (7%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
               +R    R  +  R+ +   + EYF ++ F+ + S  +  +   E    AF  +   
Sbjct: 119 PHIRHRTKLFRAVMRIRSTLAFEIHEYFRKHDFLYLSSPIITSND-GEGAGEAFVVDNEE 177

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE 127
           +D   K   L  + +   +       +K++ FA  +R        H  EF M+E   +  
Sbjct: 178 KDFFNKKATLGVTGQLHAEAYALG-FQKVYTFAPTFRAERSNTKKHAAEFWMIEPEVSFY 236

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
             + ++    ++++       +            F +     + E   ++ N       +
Sbjct: 237 KLKDIIHLGDSLLK----TVIKNTIKKHPAEFEYFQKNIDANLVEKLQQFYN-------N 285

Query: 188 NPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
                +        ++   +    D  +           +   +      I+  YP    
Sbjct: 286 KLTILEYRQAIEILKKNKAKFEFQDIEFGTDLKTEHERFLAEEVVKGPVAIV-NYPKEIK 344

Query: 247 ALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           A       D +    F+L    I EL       +   +   R +    E++   +  + +
Sbjct: 345 AFYMHQNDDGQTVAAFDLLVPGIGELIGGSQREVRYDKLFQRLKDLNMEQE---DLQWYL 401

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           D   L        S+G  +GF+RL+M VTG +NI + I  P +
Sbjct: 402 D---LRKF-GNYSSAGFGLGFERLIMYVTGVDNIRDSIPYPRT 440


>gi|71033395|ref|XP_766339.1| asparaginyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353296|gb|EAN34056.1| asparaginyl-tRNA synthetase, putative [Theileria parva]
          Length = 558

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 114/356 (32%), Gaps = 43/356 (12%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +    R  + + R  +  R+ I+S + ++F  N+F E+D+  L     N  ++   +   
Sbjct: 232 KYTHFRFRNKQFRSIIAIRSAIKSYIHQFFTSNKFTEVDTPCLTLM--NCENLAPLT--- 286

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRA 125
                   P+ L ++ +   +        K++    ++R        H  EF M+E    
Sbjct: 287 ------NIPVNLSSTGQMELEFACYG-LGKVWKVGPSFRGERSDTIRHANEFWMIEAEIP 339

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             +   ++     +IR  A    Q    +     N   + +   V  + A    I     
Sbjct: 340 DATLTGMINLIQELIRGCATYILQNHEDYVKYLNNFNDKYKDFLVHLSNANIKMITYEDA 399

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +   ++ +  L          +      W    S     ++      N    +  +P   
Sbjct: 400 VRILNETNSGLD---------KQDKVFEWGKRLSEPQERRLL-KYFPNDIIAIANFPESI 449

Query: 246 SALANIYPADPRFT----------KRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQE 294
           +       +    +          + F+ L     E+        +    +    K  + 
Sbjct: 450 TPFYMKSSSGTDKSVESGNLKNTVENFDILAPFGYEIAGGSIREHEYEVLKR---KVNER 506

Query: 295 KKKIYNETYPIDEDFLACLTEMP-QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           K    +      E +L     +     G  +GFDRLVML+T   NI +V   P ++
Sbjct: 507 KISGEDY-----EKYLNLRKNVYLPHGGFGIGFDRLVMLMTMKENIRDVTPFPVTK 557


>gi|170290898|ref|YP_001737714.1| asparaginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174978|gb|ACB08031.1| asparaginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 432

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/353 (16%), Positives = 113/353 (32%), Gaps = 54/353 (15%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++    R    R R  L+ R  +  +  E+FV N F+ +++ +   +   E     F 
Sbjct: 120 LDNRHLHIRTT--RMRNALMIRMEVMRATEEWFVNNGFVRVEAPTFVGAAV-EGGATLFE 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
                  +  K  YL  S +F  +  + +  E ++    ++R  +     H  EF   E 
Sbjct: 177 VP-----YFGKKAYLTQSSQFYLEAAIFS-FENVYTIQPSFRAEKSRTRRHLTEFWHAEA 230

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVA----NQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
             A      +M    ++++   E      + K+ +              IT  E      
Sbjct: 231 EMAWADLNGMMDVVESLVKYIVEKVVERASDKLEALGRRMEAIEGRFPRITYDE------ 284

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
                                 A++ G  +   + +     R++          +    +
Sbjct: 285 ------------------ALELAKRKGAEIEWGEDFGTEVERLISL------EFDLPVFV 320

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP    A A  +  DP+  +   +  C   L       +    Q  R E E +   +I
Sbjct: 321 THYPK--KAKAFYHKQDPKRPE---VVLCADLLAPEGIGEIVGGGQ--RIESENELISRI 373

Query: 299 YNETY-PIDE-DFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             E   P D   +L          SG  +G +R +  + G  +I + I  P +
Sbjct: 374 VEEGLNPEDYKWYLDLRRYGSVPHSGFGLGIERTIRWIAGLPHIRDAIPFPRT 426


>gi|254565879|ref|XP_002490050.1| Mitochondrial asparaginyl-tRNA synthetase [Pichia pastoris GS115]
 gi|238029846|emb|CAY67769.1| Mitochondrial asparaginyl-tRNA synthetase [Pichia pastoris GS115]
 gi|328350454|emb|CCA36854.1| asparaginyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 478

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 115/360 (31%), Gaps = 34/360 (9%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PG 54
           +  IP         H R +       L  R+ ++  L E+F + QF       +  S   
Sbjct: 133 LRTIP---------HLRWKTQFLSSILRFRSHVEMKLMEFFTQEQFTRTHPPLITSSDCE 183

Query: 55  NETHIRAFSTEL-----IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               +  F  E      I      K  YL  S +    ++L     +++     +R  E 
Sbjct: 184 GAGEL--FKIESASRADIENKFFGKDSYLTVSTQLHL-EVLCMALSRVWTLTPCFRAEES 240

Query: 110 G-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF MLE   A  S  + +      +      +  +    Q  N       +  
Sbjct: 241 DTHRHLSEFWMLEAEIAFISDVRQLTTFCERMIKHVVNSLHQDLEGQGSNLINSRRDQEF 300

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            V +   R+  +  G            +L  ++ +  I       W +       + +  
Sbjct: 301 -VHKMIERWDQLLNGKWKTITYTEAIDILSAESSKGNISFQFKPAWGEPLQSEHEKWLTG 359

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +   +L  YP            D +    F+L   ++       E++    + H  
Sbjct: 360 EYFKSPVFVL-NYPKESKPFYMTRNPDGKTVACFDLLVPDV------GEIIGGSMREHNI 412

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  + E K+   +T  I E +L+  +       G  MGF+RL+  +    NI +VI  P 
Sbjct: 413 DLLLDEIKQRNMKTDDI-EWYLSLRSSGSVSHGGFGMGFERLLCYLGCVENIRDVIPFPR 471


>gi|206895765|ref|YP_002246946.1| asparaginyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738382|gb|ACI17460.1| asparaginyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 428

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 107/348 (30%), Gaps = 45/348 (12%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           ++  W R    ++   L  R+ I++++ ++  EN F   D+  +             +T 
Sbjct: 115 NRHLWIRSR--KQSAILRIRHTIENAMIDFLNENGFYRFDTPIITT------AAAEGTTT 166

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
           L   D+     YL  S +   +    A   K++ F   +R  +     H  EF M+E   
Sbjct: 167 LFEVDYHGDKAYLSQSGQLYAEAGALA-LGKVYTFGPTFRAEKSKTRRHLLEFWMIEPEA 225

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A   YE  ++     +    +   ++      +   P      +                
Sbjct: 226 AWFEYEDNLQLQEQFVSYIVKRVLEENEDDLAILERPLEPLMKV---------------- 269

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                + P   + Y +A     +   D TW D         +           L  +PA 
Sbjct: 270 -----EPPFPRITYTEAVDLLNKNGFDITWGDDLGAPEETFLSNQY--EKPVFLTHFPAK 322

Query: 245 E-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
             +      P +P      +L A     E+      + D            + ++   NE
Sbjct: 323 IKAFYMQPDPENPEVVLAADLLAPEGYGEIIGGSQRIHDYDLLLQ------KIREFGLNE 376

Query: 302 TYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            Y   + +L          SG  +G +R V  +    +I E I  P  
Sbjct: 377 EYY--QWYLDLRRYGSVPHSGFGIGLERTVAWICKLEHIRETIPFPRM 422


>gi|227543674|ref|ZP_03973723.1| asparagine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300908734|ref|ZP_07126197.1| asparagine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186358|gb|EEI66429.1| asparagine--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300894141|gb|EFK87499.1| asparagine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 448

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 109/350 (31%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    +    +  R+ ++ +  E+F ++ F + D+  L   +P         
Sbjct: 132 LDNRHLWLRSR--KPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEG------- 182

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +  +L  S +   +    A   +++     +R  +     H  EF M+E
Sbjct: 183 TTELFETDYFDRSAFLSQSGQLYAEAGAMA-LGRVYTMGPTFRAEKSKTRRHLMEFWMIE 241

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +K     I    +                      I             
Sbjct: 242 PEMAWMHQDESLKIQEQYIAYLVQDL--------------------IDHCARELEMVGRS 281

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + +     + P   + Y +A +   +   D  +   F       +           +  Y
Sbjct: 282 VESLKPFTELPYPRITYKKAIEMLQKSGFDVEYGADFGSPEETYLADQ--FQKPVFILNY 339

Query: 242 PAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    A      P D R     +L            E++   E+ + +E    + ++   
Sbjct: 340 PKEIKAFYMPEDPEDSRQVICADL-----LAPEGYGEIIGGSERSYDYEYITNKLEENGL 394

Query: 301 ETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                D  +   L        SG  MG +R +  +T  ++I E I  P  
Sbjct: 395 SKE--DYGWYDDLRKYGSIPHSGFGMGLERFLAWITLQDHIRENIPFPRM 442


>gi|187778145|ref|ZP_02994618.1| hypothetical protein CLOSPO_01737 [Clostridium sporogenes ATCC
           15579]
 gi|187775073|gb|EDU38875.1| hypothetical protein CLOSPO_01737 [Clostridium sporogenes ATCC
           15579]
          Length = 429

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/331 (17%), Positives = 111/331 (33%), Gaps = 39/331 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +       +N I +  RE+  +  F EI +  + +            TE+    +  
Sbjct: 122 RHRKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVW--EGAEGG----TEVFKVKYFE 175

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQ 131
              YL  SP+F  + ++ AG E++F   HA+R  E     H  E+  ++      E  + 
Sbjct: 176 NTAYLAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYISMDLEIGFIEDEKD 235

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +++   E  N +   + N+        +       F     I           
Sbjct: 236 IMEIEERLLKFILEKLNNECREYFNLLEAELPRIQGGIPKITFKEALGI----------- 284

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                L  +  +  +    D     +       K       +    L  YP  +  +  +
Sbjct: 285 -----LSREYNKNNLTYDLDPESEKLI-----CKYAKEKLNSDFIFLTNYPRKKRPMYTM 334

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P     T  F+L    IE+      + D          +  + K    + Y   E +L+
Sbjct: 335 -PLGEDGTHSFDLLFRGIEITTGGQRIHDYNML-----IDNMKFKGFNPKDY---ESYLS 385

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                MP+  G+A+G +RL   + G  N+ E
Sbjct: 386 VFKYGMPKHGGLAIGLERLTARLLGLENVRE 416


>gi|224000023|ref|XP_002289684.1| asparaginyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220974892|gb|EED93221.1| asparaginyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 487

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/366 (13%), Positives = 100/366 (27%), Gaps = 47/366 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R+ +  S+  +F    F  + +  +  S       +  F    +
Sbjct: 130 AHLRPRTNTIAAVARVRSTLAGSIHSFFQGEGFQYVQTPLITASDCEGAGEM--FRVTTL 187

Query: 68  ------------------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHA 103
                                    +D   K  +L  S +   +    A    ++ F   
Sbjct: 188 NTDDVSSLPRAKDEDGKELPGVDYTEDFFGKAAFLTVSGQLGGETYACA-LGDVYTFGPT 246

Query: 104 WRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           +R        H  EF M+E   A       M +  ++++       +K         N F
Sbjct: 247 FRAENSQTARHLAEFWMVEPEMAFADLTSAMDNAESMLKSVVGEVLEKCDEDLTFFANFF 306

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
            +     + +       ++             +L    A+        +  +    +   
Sbjct: 307 DKGLKNRLKKV------VEKPFVRVAYRDAIGYLQEEIAKDPSKWQFPEVEFGTDLATEH 360

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
              +           +  YP    A       +       E       L     EL+   
Sbjct: 361 ERWLAET-KFESAVFVYNYPKKIKAFYMRDNDEDGG----ETVNAMDLLVPGVGELVGGS 415

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           ++  R +  +++ K++          +L          +G  +GF+RLV  V G  NI +
Sbjct: 416 QREERLDVLIEKMKELGLNEEDY-WWYLDLRRFGSVPHAGYGLGFERLVTYVCGIENIRD 474

Query: 342 VIWTPF 347
            I  P 
Sbjct: 475 AIAYPR 480


>gi|320590914|gb|EFX03355.1| asparaginyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 573

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/400 (14%), Positives = 104/400 (26%), Gaps = 72/400 (18%)

Query: 1   MHQIPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--- 52
           +  +P         H R R       L  R+ + SSL  +F    F++     +  S   
Sbjct: 186 LRTLP---------HLRPRVPFNSTLLRLRSNVISSLDRFFTSRDFVQTHPPLITSSDCE 236

Query: 53  PGNETH--------------IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIF 98
              E                     ++       R P YL  S +    + LA     ++
Sbjct: 237 GAGEVFTVSAASSASSSSSSSSNSPSKSGDAHFFRSPKYLTVSTQLHL-EALAQAVGSVW 295

Query: 99  CFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
             +  +R  E     H  EF MLE           + D +  +  A             V
Sbjct: 296 TLSPTFRAEESDTPRHLSEFYMLEAEVCFVDRLDGVMDLVEDMLRAVAA----DVQGNRV 351

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
                + P   +  +   R+  +        P       L + A   G         + +
Sbjct: 352 ADELLARPGGSSTDDLAHRWQGL--VQQDRWPRITYAEALRILAAAPGRFDFAPTWATGL 409

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNA-- 274
            +           G      +  YP    +        +          +   +  +A  
Sbjct: 410 QTEHEKYLAYAVGGGQTPVFVTHYPRDIKAFYMLPSRDNAGEPGELPAVSDGQQPVSAAT 469

Query: 275 ----------CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED---------------- 308
                       E+     + HR  + +   +        + ED                
Sbjct: 470 VDCFDLLVPEFCEIAGGSMREHRLPELVAAMRSRG---MQVAEDGAPSGQDGSSSSDLDW 526

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++       P   G  +GFDRL+  ++G   I + +  P 
Sbjct: 527 YVDLRRWGCPPHGGFGVGFDRLLCYLSGVQTIRDTVAFPR 566


>gi|327277896|ref|XP_003223699.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 559

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/332 (17%), Positives = 106/332 (31%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
               R+ +  S R++F +  + EI   +L      G  T        L   D+  +  YL
Sbjct: 256 IFKVRSTVIQSFRDHFFDRGYYEITPPTLVQTQVEGGST--------LFKMDYFGEEAYL 307

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A     FC A ++R  +     H  E+T +E      S+E L+    
Sbjct: 308 TQSSQLYLETCIPA-LGDTFCIAQSYRAEQSRTRRHLAEYTHIEAECPFMSFEDLLNRLE 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   S      NP  EP            A +                 
Sbjct: 367 DLVCDVVDRVLKSPVSELLYALNPNFEPPKRPFRRMNYTDALV----------------- 409

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++  ++      +          + +    IN   +L R+PA   S      P DP
Sbjct: 410 --WLKEHDVKKEDGTYYEFGDDIPEAPERQMTDAINEPILLCRFPAEIKSFYMQRCPEDP 467

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     ++ I    Y    D       
Sbjct: 468 RLTESVDVLMPNVGEIVGGSMRIWDSEELLEGYK-----REGIDPTPYYWYTD--QRKYG 520

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +   ++I +V   P 
Sbjct: 521 TCPHGGYGLGLERFLTWILNRHHIRDVCLYPR 552


>gi|219275589|ref|NP_001020806.2| asparaginyl-tRNA synthetase, cytoplasmic isoform 1 [Rattus
           norvegicus]
 gi|149064471|gb|EDM14674.1| rCG46601, isoform CRA_b [Rattus norvegicus]
          Length = 558

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+MI    R++F +  + E+ + +L      G  T        L   D+  +  +L
Sbjct: 255 ILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGAT--------LFKLDYFGEEAFL 306

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  EFT +E      ++E L+    
Sbjct: 307 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLSRLE 365

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +    + NP  +                         D  +    
Sbjct: 366 DLVCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMN-------------YSDAIEWLRE 412

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      D   +   R++         IN   +L R+P    S      P DP
Sbjct: 413 HDVKKEDGTFYEFGDDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 466

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+             +     E     K++  +        D+      
Sbjct: 467 RLTESVDVLMPNVGEIVGGSMR--SWDSEEILEGY---KREGIDPAPYYWYTDQR----K 517

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 518 YGTCPHGGYGLGLERFLSWILNRYHIRDVCLYPR 551


>gi|240279712|gb|EER43217.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 949

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/330 (17%), Positives = 108/330 (32%), Gaps = 48/330 (14%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I +  R       FIEI +  LQ S   E+    F  +     +  +  +
Sbjct: 301 SQSIFRIQSAISNLFRAALDAQGFIEIHTPKLQSSA-TESGASVFEVK-----YFTREAF 354

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+ + +  +AA  E         R  + G +   E             +++ K   
Sbjct: 355 LAQSPQLAKQIEIAADLE---------RVSDIGAMAIEEHYHEALETIDSVLKEIFKGIY 405

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
              R   ++   +   F + +     E   I  AE       I L               
Sbjct: 406 GRYRREVDIIKGQ---FPHEDLVWLDETPIIPFAE------GIKLLNDSGW--------- 447

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADP 256
               +Q G  ++ ++         L E I+     +   ILD++P        +  P +P
Sbjct: 448 ----RQDGEELSVNEDLGTRDEIRLGELIKEKYHTD-YYILDKFPKSARPFYAMEDPENP 502

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
            FT  F+++    E+ +    + D      R ++       I        E++L      
Sbjct: 503 DFTNSFDIFVRGQEIVSGGQRIHDEKILEQRMKE-----AGINPLAM---EEYLEGFRWG 554

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            P  +G  +G +RL+ML+    NI      
Sbjct: 555 APPHAGAGIGLERLLMLILKLGNIRLASLF 584


>gi|167629421|ref|YP_001679920.1| lysyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592161|gb|ABZ83909.1| lysyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 264

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 50/122 (40%), Gaps = 17/122 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-------------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D   R R                + R+ I  ++RE+  E  ++E+++ 
Sbjct: 138 LRPLPEKFHGLKDVELRYRQRYLDLIMNPEVKRTFVLRSKIIRAVREFLDERGYLEVETP 197

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L    G  T  R F T     + +   LY++ + E   K+L+  G E+++     +RN 
Sbjct: 198 VLHPIAGGAT-ARPFITH---HNALDMKLYMRIALELHLKRLIVGGFERVYELGRIFRNE 253

Query: 108 EQ 109
             
Sbjct: 254 GS 255


>gi|219275592|ref|NP_001136421.1| asparaginyl-tRNA synthetase, cytoplasmic isoform 2 [Rattus
           norvegicus]
          Length = 507

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+MI    R++F +  + E+ + +L      G  T        L   D+  +  +L
Sbjct: 204 ILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGAT--------LFKLDYFGEEAFL 255

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  EFT +E      ++E L+    
Sbjct: 256 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLSRLE 314

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +    + NP  +                         D  +    
Sbjct: 315 DLVCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMN-------------YSDAIEWLRE 361

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      D   +   R++         IN   +L R+P    S      P DP
Sbjct: 362 HDVKKEDGTFYEFGDDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 415

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+             +     E     K++  +        D+      
Sbjct: 416 RLTESVDVLMPNVGEIVGGSMR--SWDSEEILEGY---KREGIDPAPYYWYTDQR----K 466

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 467 YGTCPHGGYGLGLERFLSWILNRYHIRDVCLYPR 500


>gi|150866122|ref|XP_001385612.2| Asparaginyl-tRNA synthetase, cytoplasmic (Asparagine--tRNA ligase)
           (AsnRS) [Scheffersomyces stipitis CBS 6054]
 gi|149387378|gb|ABN67583.2| Asparaginyl-tRNA synthetase, cytoplasmic (Asparagine--tRNA ligase)
           (AsnRS) [Scheffersomyces stipitis CBS 6054]
          Length = 553

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/354 (14%), Positives = 105/354 (29%), Gaps = 53/354 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            +  R  +  ++R +F E   +E+    +      G  T 
Sbjct: 229 DPSLLLDQRHLTLRGETLSAVMKVRASLLRAIRRFFAEEGLLEVTPPCMVQTQVEGGST- 287

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   D+  +  YL  S +   +  L A    ++C   ++R  +     H  E+
Sbjct: 288 -------LFKMDYYGEEAYLTQSSQLYLETCLPA-LGDVYCVQESFRAEKSHTRRHLSEY 339

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E   A   ++ L+     +I    +   +   +                      + 
Sbjct: 340 THIESELAFIEFDDLLSHLERLITKTVQYVLEDEVAG------------------PLIKQ 381

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCC 235
            N D         + +         + GI     + +   D  +     K+   +G    
Sbjct: 382 LNPDFQPPKTPFLRMEYIHALEWLNEHGIPNEEGEKFKFGDDIAEAAERKMTDTIGT--P 439

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            +L R+P    S        DPR T+  + L     E+        D  E          
Sbjct: 440 ILLIRFPVEIKSFYMQKCKDDPRVTESVDVLMPNVGEITGGSMRTYDYDELIA-----AI 494

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +++K+  ++Y    D            G  +G +R++  +     + +    P 
Sbjct: 495 KREKLDLDSYYWFTD--QRKYGTCPHGGYGLGTERILAWLCDRFTVRDCSLYPR 546


>gi|281207090|gb|EFA81274.1| asparagine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 663

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 104/355 (29%), Gaps = 45/355 (12%)

Query: 2   HQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIR 60
             +  +    R         +  R++   + R+++ EN + E+   +L  +     + + 
Sbjct: 342 QMLDQRHIVLRGSRASS--IMKLRSITMKAFRDHYFENGYYEVSPPTLVNTFCEGGSEL- 398

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                    D+  +P YL  S +   + ++      +FC A ++R        H  EFT 
Sbjct: 399 ------FTLDYFGQPAYLTQSSQLYLETMIP-VAGDVFCMAQSYRAELSKTRRHLAEFTH 451

Query: 120 LEWYRAHESY----EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           LE      ++    +++     ++     ++    + S       P    + +  A+   
Sbjct: 452 LEAECPFITFEDLLDRIEYLVCDVAERIFKIDKDLLLSVNPNAKVPKRPFKRMDYAD--- 508

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
               I      +          +               + D        K+   +G    
Sbjct: 509 ---GIKYVREHNIYKDEATKTHFE--------------FGDDIPEAAERKMNDQIGE--P 549

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
               R+PA   +      P D   T+  +L    +         +    Q      +  +
Sbjct: 550 IFFCRFPAEMKAFYMARCPEDNTLTESTDLLMPGVGEIVGGSMRISDYTQL----MDAYK 605

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           K+ +    Y    D            G  +G +R +    G  +I  V   P  +
Sbjct: 606 KEGLDPSQYYWFTD--QRKYGTTPHGGYGLGVERFLTWFLGEEHIRNVCLYPRYR 658


>gi|37361912|gb|AAQ91069.1| LRRGT00113 [Rattus norvegicus]
          Length = 496

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+MI    R++F +  + E+ + +L      G  T        L   D+  +  +L
Sbjct: 193 ILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGAT--------LFKLDYFGEEAFL 244

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  EFT +E      ++E L+    
Sbjct: 245 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLSRLE 303

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +    + NP  +                         D  +    
Sbjct: 304 DLVCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMN-------------YSDAIEWLRE 350

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      D   +   R++         IN   +L R+P    S      P DP
Sbjct: 351 HDVKKEDGTFYEFGDDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 404

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+             +     E     K++  +        D+      
Sbjct: 405 RLTESVDVLMPNVGEIVGGSMR--SWDSEEILEGY---KREGIDPAPYYWYTDQR----K 455

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 456 YGTCPHGGYGLGLERFLSWILNRYHIRDVCLYPR 489


>gi|325283162|ref|YP_004255703.1| Asparaginyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324314971|gb|ADY26086.1| Asparaginyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 443

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 64/349 (18%), Positives = 115/349 (32%), Gaps = 28/349 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R    +  R+ +QS + E+F +  F   D+     +    T      
Sbjct: 113 LDHRHLWFRHR--RPWAVMRVRDCVQSGIVEFFRQEGFTRFDAPFFTPNAAEGT------ 164

Query: 64  TELIIQDHIRKP-LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           TEL   D   +   YL  + +   +    A   K++ F   +R  +     H  EF M+E
Sbjct: 165 TELFEIDLFGEDKAYLSQTGQLHAEAGALA-FGKVYTFGPTFRAEKSKTRRHLLEFWMVE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  +++  M      +         +                      A   Y  I 
Sbjct: 224 PEVAPATHQDNMDLQERFVSFLVRRVLDEC----RQELELLGRDVSKLAGAAEGNYPRIT 279

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               LD   +           QA ++      W D F       +  +   +   +++RY
Sbjct: 280 YTEALDIIRRHIEEGDLPDNVQADVQ---PVEWGDDFGAPHETILGYH--FDRPVMVERY 334

Query: 242 PAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           PA  ++      PADPR     +     +       E++   E+ H F   ++E+ +   
Sbjct: 335 PASFKAFYMQPDPADPRLALCDD-----MIAPEGYGEIIGGSERIHDF-DLLKERIEGEG 388

Query: 301 ETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 E +L          +G  MG +R +  +TG ++I E I  P  
Sbjct: 389 LPLEAFEWYLDLRRYGSVPHAGFGMGLERFIAWMTGIDHIREAIPFPRM 437


>gi|326427598|gb|EGD73168.1| asparaginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 506

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/405 (14%), Positives = 103/405 (25%), Gaps = 84/405 (20%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQY---- 51
           +  IP         H R R       L  R+ +       F E  F  + +  L      
Sbjct: 121 LRTIP---------HMRMRTSTLAAALRVRSCLTQLTHRIFAEWDFASVHTPILTSNDCE 171

Query: 52  -----------------------------SPGNETHIRAFSTELIIQDH----------- 71
                                        S G    +R+        +            
Sbjct: 172 GGGDVFSVTAPHHHHRHSESSQPSDGTSDSTGTGGRLRSNRNSGNSGNGSEADDAAAVTT 231

Query: 72  ---IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHE 127
                +P +L  S +   + +      +++ F   +R        H  EF MLE   A  
Sbjct: 232 AGLFSRPFHLTVSGQLHAEAIACGAYPRVYTFGPTFRAENSHTPRHLAEFYMLEAEMAFA 291

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
           S +  +    + I  AA           ++  +          A A   Y  I     + 
Sbjct: 292 SLDDCLDLQDDFISAAAAQLMHAAGDDLDMLWSKEPATRERVQALAKGSYERITYTEAVK 351

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
             ++      +  A            W    +    + I           +  YP     
Sbjct: 352 ALEEHHAKTAFTLA----------PCWGRDLAYEHEQFIANMC--EGPVFITNYPKAIKP 399

Query: 248 LANIYPADPR----FTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
              +    P          +L    I EL                  +++        E 
Sbjct: 400 FYMLQDDSPPSQGATVAAADLIVPGIGELTGGSAREHRLDHLHANITEQLGAAAAADLE- 458

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + +D   L         +G  +GF+RL++ VTG  N+ +VI  P 
Sbjct: 459 WYLD---LRRF-GSVPHAGFGLGFERLLLAVTGLKNVRDVIPFPR 499


>gi|194467334|ref|ZP_03073321.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454370|gb|EDX43267.1| asparaginyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 432

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 109/350 (31%), Gaps = 44/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           + ++  W R    +    +  R+ ++ +  E+F ++ F + D+  L   +P         
Sbjct: 116 LDNRHLWLRSR--KPWALMRIRSRVKLATMEFFEKHGFTQFDAPELTGSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL   D+  +  +L  S +   +    A   +++     +R  +     H  EF M+E
Sbjct: 167 TTELFETDYFDRSAFLSQSGQLYAEAGAMA-LGRVYTMGPTFRAEKSKTRRHLMEFWMIE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +K     I    +                      I             
Sbjct: 226 PEMAWMHQDESLKIQEQYIAYLVQDL--------------------IDHCARELEMVGRS 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           + +     + P   + Y +A +   +   D  +   F       +           +  Y
Sbjct: 266 VESLKPFTELPYPRITYKEAIEMLQKGGFDVEYGADFGSPEETYLADQ--FQKPVFILNY 323

Query: 242 PAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    A      P D R     +L            E++   E+ + +E    + ++   
Sbjct: 324 PKEIKAFYMPEDPEDSRQVICADL-----LAPEGYGEIIGGSERSYDYEYITNKLEENGL 378

Query: 301 ETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                D  +   L        SG  MG +R +  +T  ++I E I  P  
Sbjct: 379 SKE--DYGWYDDLRKYGSIPHSGFGMGLERFLAWITLQDHIRENIPFPRM 426


>gi|68534368|gb|AAH99099.1| Asparaginyl-tRNA synthetase [Rattus norvegicus]
          Length = 404

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+MI    R++F +  + E+ + +L      G  T        L   D+  +  +L
Sbjct: 101 ILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGAT--------LFKLDYFGEEAFL 152

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  EFT +E      ++E L+    
Sbjct: 153 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLSRLE 211

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +    + NP  +                         D  +    
Sbjct: 212 DLVCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMN-------------YSDAIEWLRE 258

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      D   +   R++         IN   +L R+P    S      P DP
Sbjct: 259 HDVKKEDGTFYEFGDDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 312

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+             +     E     K++  +        D+      
Sbjct: 313 RLTESVDVLMPNVGEIVGGSMR--SWDSEEILEGY---KREGIDPAPYYWYTDQR----K 363

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 364 YGTCPHGGYGLGLERFLSWILNRYHIRDVCLYPR 397


>gi|50954026|ref|YP_061314.1| aspartyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50950508|gb|AAT88209.1| aspartyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 425

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/337 (19%), Positives = 110/337 (32%), Gaps = 34/337 (10%)

Query: 9   WWNRDFH-YRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI 67
           W   D    +       +   +++LR Y+V+N FIEI +  L  S            EL 
Sbjct: 108 WRFLDLREPKHNLIFRVQTTFENALRHYWVDNGFIEIHTPKLMAS------ASESRAELF 161

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH 126
              +     YL  SP+   +   AAG  K+F    A+R        H  EFT ++   + 
Sbjct: 162 ELPYFETTAYLAQSPQIFKQMAQAAGFGKVFEIGPAFRADPSFTSRHATEFTSVDTEISW 221

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
               + +      +  A   A ++                    AE  A +       T 
Sbjct: 222 IESHEDVMKVHEDLLVAGFTAVKEKHG-----------------AEIEALFGVEITVPTT 264

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
             P  P      + A++      HDD       R +   ++   G      L  Y A   
Sbjct: 265 PFPRIPLAEAKRIVAERGYEVPRHDDDMDPEGERQISAYVKETFGHE-FVFLTDYAASIR 323

Query: 247 -ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                 +  D   TK ++L    +E+            +    E++ +EK     E   +
Sbjct: 324 PYYHMRHSEDRSITKSYDLIFNGVEISTGAQREH----RVETIEQQAREKGLSVEELEDV 379

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
              F      +P   G  MG  R++ML+   +N+ E 
Sbjct: 380 LAFF---RYGVPPHGGFGMGLARVLMLMLHLSNLRET 413


>gi|255720376|ref|XP_002556468.1| KLTH0H14080p [Lachancea thermotolerans]
 gi|238942434|emb|CAR30606.1| KLTH0H14080p [Lachancea thermotolerans]
          Length = 468

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 104/336 (30%), Gaps = 29/336 (8%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQ-----DHIRK 74
            L  R+ ++SSL ++F    F ++    L          +  F  E          +  +
Sbjct: 141 LLRFRSCVESSLTQFFDSQDFTKVSPPVLTSGDCEGAGEL--FRAESNAHIARKTSYFGR 198

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLM 133
           P YL  S +    ++LA    +++     +R  E     H  EF MLE    +    Q +
Sbjct: 199 PTYLTVSTQLHL-EVLAMALNRVWTLTPCFRAEESDTNRHLAEFWMLETELCYV---QNV 254

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           K    +     +   +   + +          E     E+    A  +     + P    
Sbjct: 255 KGLTKVAEHMLKHVVESCLAQKLSLLPSVVPQENAESPESI--VARWESLLHSEWPRVTY 312

Query: 194 RHLLYLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
              + L  +Q  + + + +  W         + +  +   N    +  YP          
Sbjct: 313 TSAIELLKRQHSVSQFSFEPQWGKDLQSEHEKWLAAHY--NSPVFITDYPRNCKPFYMKQ 370

Query: 253 PADP-RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
             D       F+L    +          D  +       +  +++ + +E    D D+  
Sbjct: 371 NFDAADTVACFDLIVPQMGEIIGGSIREDNYDTL----IQEMDRRGMKSE----DLDWYT 422

Query: 312 CLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            L         G  +G +R V  + GA NI + I  
Sbjct: 423 SLRLNGGAPHGGFGLGLERFVSWLFGAQNIRDAIPF 458


>gi|300783257|ref|YP_003763548.1| nondiscriminating aspartyl-tRNA synthetase [Amycolatopsis
           mediterranei U32]
 gi|299792771|gb|ADJ43146.1| nondiscriminating aspartyl-tRNA synthetase [Amycolatopsis
           mediterranei U32]
          Length = 405

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/323 (16%), Positives = 91/323 (28%), Gaps = 61/323 (18%)

Query: 30  SSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
              R       F E+ +  +  S   E+    F       D+  +P YL  SP+F  K+ 
Sbjct: 134 RGFRSTLDSRGFTEVHTPKIVASA-TESGGCVF-----GIDYFGRPAYLAQSPQFF-KQA 186

Query: 90  LAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVA 147
           L    E+++     +R        H  ++T L+        +  +M     ++   ++ A
Sbjct: 187 LVGVFERVYEVGPVFRAEPHDTARHLAQYTSLDVELGFIRDHHDVMAVLREVLAGMSDPA 246

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
                                           I     +D  +   R      A +  + 
Sbjct: 247 LVT----------------------VPEEIPEIHFAAAVDLLEADPREPDLAPAHERALS 284

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYA 266
                     F                   +  YP  +     +  PA PR++  F+L  
Sbjct: 285 EWARREHGSDFL-----------------FVTGYPMAKRPFYTHPDPARPRYSNSFDLLF 327

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMG 325
             +EL      L    +                +       D+L      MP   G A+G
Sbjct: 328 RGVELVTGGQRLHRHADYLAVL----------GDAAPEY-ADYLQAFAHGMPPHGGFAIG 376

Query: 326 FDRLVMLVTGANNINEVIWTPFS 348
            +R    + GA N+ EV   P  
Sbjct: 377 LERWTARLLGAANVREVTLFPRD 399


>gi|149064469|gb|EDM14672.1| rCG46601, isoform CRA_a [Rattus norvegicus]
 gi|149064470|gb|EDM14673.1| rCG46601, isoform CRA_a [Rattus norvegicus]
          Length = 515

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+MI    R++F +  + E+ + +L      G  T        L   D+  +  +L
Sbjct: 212 ILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGAT--------LFKLDYFGEEAFL 263

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  EFT +E      ++E L+    
Sbjct: 264 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLSRLE 322

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +    + NP  +                         D  +    
Sbjct: 323 DLVCDVVDRVLKSPVASIVYDLNPNFKAPKRPFRRMN-------------YSDAIEWLRE 369

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      D   +   R++         IN   +L R+P    S      P DP
Sbjct: 370 HDVKKEDGTFYEFGDDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 423

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+             +     E     K++  +        D+      
Sbjct: 424 RLTESVDVLMPNVGEIVGGSMR--SWDSEEILEGY---KREGIDPAPYYWYTDQR----K 474

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 475 YGTCPHGGYGLGLERFLSWILNRYHIRDVCLYPR 508


>gi|119719757|ref|YP_920252.1| asparaginyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524877|gb|ABL78249.1| asparaginyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 430

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/343 (16%), Positives = 110/343 (32%), Gaps = 41/343 (11%)

Query: 12  RDFHYRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
           R    R R     L  R+ +  +L E+F  N F E+       +   E     F  + + 
Sbjct: 117 RHLAVRSRKMTAVLKLRSTVFEALHEWFRSNGFYEVHCPMFISAAV-EGGATLFPVKYVD 175

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE 127
                  +YL  S +F  + L+ +  EK++  A ++R  +     H  EF   E   A  
Sbjct: 176 ----GSTVYLTQSSQFYLEALIYS-LEKVYTVAPSFRAEKSRTRRHLTEFWHAEAEVAWT 230

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
             E ++K    ++        +K      +        + +        Y          
Sbjct: 231 GLEGILKVEEELVSHIVRRVLEKNREELELLGRNLEPLKNVEPPFPRISY---------- 280

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                D+ +  LQ +   ++      W D         +      +    L  +P    A
Sbjct: 281 -----DKAIEILQGKGLNVK------WGDDLGADEERALTEE--FDKPFFLYGFPVGVKA 327

Query: 248 LANIYPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
             +      P  T   +L A           ++   E+  + E+ + + K+         
Sbjct: 328 FYHKNDPSRPEVTLSADLLAPEGYGE-----IIGGGERIEKLEELLDKIKQFGLNPSDY- 381

Query: 307 EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E +L          +G  +G DRLV  + G ++I + I  P +
Sbjct: 382 EWYLDLRRYGTVPHAGFGLGMDRLVTWIAGLDHIVDSIPFPRT 424


>gi|190348970|gb|EDK41531.2| asparaginyl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260]
          Length = 544

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/352 (13%), Positives = 105/352 (29%), Gaps = 49/352 (13%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            +  R+    ++R +F E   +E+    +      G  T 
Sbjct: 220 DPSLLLDQRHLTLRGEALSAVMKVRSAFLYAIRRFFEEEGLLEVTPPCMVQTQVEGGST- 278

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   ++  +  YL  S +   +  L +    +FC   ++R  +     H  E+
Sbjct: 279 -------LFKMNYYGEDAYLTQSSQLYLETCLPS-LGDVFCVQESFRAEKSHTRRHLSEY 330

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E   A   +E L+     ++    +   +   +   +       P ++     F R 
Sbjct: 331 THIEGELAFIDFEDLLVHLEKLLTQTVKYVLEDPVAGPLIKQLN---PNFVAPKGPFLRM 387

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
             +D    L+    P+                    + D  +     K+   +G     +
Sbjct: 388 EYVDALEWLNEHGIPNED-------------GEKFKFGDDIAEAAERKMTDTIG--KPIL 432

Query: 238 LDRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           L R+P    +      AD R        L     E+      + D  E          +K
Sbjct: 433 LIRFPVEIKSFYMQKCADDRRVTESVDVLMPNVGEILGGSMRMYDYDELVA-----SIKK 487

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + +  ++Y    D            G  +G +R++  +     + +    P 
Sbjct: 488 EGLDLDSYYWFTDLRK--YGTCPHGGYGLGTERILAWLCDRFTVRDCSLYPR 537


>gi|146413276|ref|XP_001482609.1| asparaginyl-tRNA synthetase [Meyerozyma guilliermondii ATCC 6260]
          Length = 544

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/352 (13%), Positives = 105/352 (29%), Gaps = 49/352 (13%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            +  R+    ++R +F E   +E+    +      G  T 
Sbjct: 220 DPSLLLDQRHLTLRGEALSAVMKVRSAFLYAIRRFFEEEGLLEVTPPCMVQTQVEGGST- 278

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   ++  +  YL  S +   +  L +    +FC   ++R  +     H  E+
Sbjct: 279 -------LFKMNYYGEDAYLTQSSQLYLETCLPS-LGDVFCVQESFRAEKSHTRRHLSEY 330

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E   A   +E L+     ++    +   +   +   +       P ++     F R 
Sbjct: 331 THIEGELAFIDFEDLLVHLEKLLTQTVKYVLEDPVAGPLIKQLN---PNFVAPKGPFLRM 387

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
             +D    L+    P+                    + D  +     K+   +G     +
Sbjct: 388 EYVDALEWLNEHGIPNED-------------GEKFKFGDDIAEAAERKMTDTIG--KPIL 432

Query: 238 LDRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           L R+P    +      AD R        L     E+      + D  E          +K
Sbjct: 433 LIRFPVEIKSFYMQKCADDRRVTESVDVLMPNVGEILGGSMRMYDYDELVA-----SIKK 487

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + +  ++Y    D            G  +G +R++  +     + +    P 
Sbjct: 488 EGLDLDSYYWFTDLRK--YGTCPHGGYGLGTERILAWLCDRFTVRDCSLYPR 537


>gi|30688944|ref|NP_849558.1| aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase,
           putative [Arabidopsis thaliana]
 gi|30688949|ref|NP_194847.3| aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase,
           putative [Arabidopsis thaliana]
 gi|7270020|emb|CAB79836.1| aspartate--tRNA ligase-like protein [Arabidopsis thaliana]
 gi|222424631|dbj|BAH20270.1| AT4G31180 [Arabidopsis thaliana]
 gi|332660472|gb|AEE85872.1| aspartyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332660473|gb|AEE85873.1| aspartyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 558

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/339 (14%), Positives = 98/339 (28%), Gaps = 45/339 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  ++ + RE      F+ I +  L    S G     R         ++  +P 
Sbjct: 250 QAIFQLQYEVEYAFREKLRFKNFVGIHTPKLMAGSSEGGSAVFR--------LEYKGQPA 301

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  +     ++F     +R  +     H  EF  L+       +   + D
Sbjct: 302 CLAQSPQLHKQMAICGDLRRVFEVGPVFRAEDSFTHRHLCEFVGLDVEMEIRKHYSEIMD 361

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +      +  +    +          E +       R                   
Sbjct: 362 LVDELFVFIFTSLNERCKKELQAVGKQYPFEPLKFLPKTLRLT---------------FE 406

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPA 254
                 ++AG+ V      +    R L + +          IL RYP        +    
Sbjct: 407 EGVQMLKEAGVEVDPLGDLNTESERKLGQLVLEKYNTE-FYILHRYPKAVRPFYTMTCAD 465

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFL 310
           +P ++  F+++    E+ +    +  P     R                 ID      ++
Sbjct: 466 NPLYSNSFDVFIRGEEIISGAQRVHIPEVLEQR---------AG---ECGIDVKTISTYI 513

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+VML    NNI +    P  
Sbjct: 514 DSFRYGAPLHGGFGVGLERVVMLFCALNNIRKTSLFPRD 552


>gi|71661457|ref|XP_817749.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70882960|gb|EAN95898.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 534

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 48/379 (12%), Positives = 101/379 (26%), Gaps = 66/379 (17%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
            L   + +    R+  +   F+EI +   L  +    +        +   D+  +  YL 
Sbjct: 165 VLRLVSAVCQCFRKQLLARDFVEIHTPKMLGAASEGGSA-------VFTIDYFGQRGYLA 217

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            SP+   + +L     ++F     +R  +     H  EF  L+     E     + D + 
Sbjct: 218 QSPQLYKQMVLMGDAMRVFEIGPVFRAEKSLTHRHLTEFVGLDAEFVIEHSYTEVLDVLE 277

Query: 139 IIRCAAEVANQKIFS--------------------------------------------- 153
              CA     Q+  +                                             
Sbjct: 278 STVCAMIDHLQEDHAALVRQARESLADMDAAEGSPSALGRNQEKEEASIVCELSEETLGA 337

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANID---LGTTLDNPDQPDRHLLYLQAQQAGIRVAH 210
           F  +  +                  +ID            +              +    
Sbjct: 338 FGCLTTDATEAHLTTDCYHGRVGVGSIDTQRRNPRQPKVLRLTFDDAVRLLLDHHVVDQP 397

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
              +S    R + E +    G++   I              +P     T  F++Y    E
Sbjct: 398 PTDFSLPQERRIGELVRERYGVDVYIIDQFPLTARPFYTLPHPHKTESTCSFDMYLRGEE 457

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +C+    + D        E+   +   +        +D++           G  +G +R+
Sbjct: 458 ICSGAQRIHDITLLLQNMERLQVDAASL--------KDYVDAFRYGAWPHGGFGLGLERI 509

Query: 330 VMLVTGANNINEVIWTPFS 348
           V+ + GA +I ++   P  
Sbjct: 510 VLFLLGAKDIRQISLFPRD 528


>gi|271963405|ref|YP_003337601.1| aspartate--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270506580|gb|ACZ84858.1| Aspartate--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 428

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 96/339 (28%), Gaps = 39/339 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R R          +  R       F+E  +  +  +   E+    F       D+  
Sbjct: 119 RHPRLRAPFEIAAAGVAGFRAALDGLGFVESQTPKIVGTA-TESGANVF-----GIDYFG 172

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQL 132
           +P +L  SP+F  K+ L    E+++     +R        H  ++T L+         + 
Sbjct: 173 RPAFLAQSPQFF-KQALVGVFERVYEVGPVFRAEPHDTARHLAQYTSLDAELGFVRDHRD 231

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL-DNPDQ 191
           +   +                                 A        I+      + P  
Sbjct: 232 VMAVL-------------------REALAGMHAAAAERATGALELLGIEPPEVPGEIPAI 272

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
                  L A+  G     +   +    R L E      G      +  YP  +     +
Sbjct: 273 HFADAQELLARHTGEDPRGEPDLAPAHERWLGEWALREHGSE-FLFVTGYPMVKRPFYTH 331

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             P  P F++ F+L    +EL      L        R    +        +       +L
Sbjct: 332 PDPERPEFSRSFDLLFRGLELVTGGQRLH-------RHADYLAALAVRGEDPQAY-AGYL 383

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           A     MP   G A+G +R    +TGA NI +    P  
Sbjct: 384 AAFAHGMPPHGGFAIGLERWTSRLTGAANIRQTTLFPRD 422


>gi|281211769|gb|EFA85931.1| asparagine-tRNA ligase [Polysphondylium pallidum PN500]
          Length = 518

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/372 (15%), Positives = 111/372 (29%), Gaps = 51/372 (13%)

Query: 3   QIPSQPW---WNRD-FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +     + R+  H R R       +  RN   + + +YF E QF  + +  +  S 
Sbjct: 164 PLQPKHHSFEFLREIAHIRPRSNTLGSMIRVRNQASNLINQYFQERQFQLVHTPIITASD 223

Query: 53  --PGNETHIRAF------------STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIF 98
              G E                    +        +P +L  S +   +   ++   +++
Sbjct: 224 CEGGGEQFQVTVPSNQQQQQQQKQQQQQQSSHFFGEPAFLTVSGQLEAEIFASSH-GRVY 282

Query: 99  CFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
            F   +R  +     H  EF M+E   A  +    +    + I+   +   +K       
Sbjct: 283 TFGPTFRAEKSNTTRHLSEFWMVEPEMAFINLNDNLSIAEDFIKYTVKNILEKCPE---- 338

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
               F++     + E      N +                    +      +    W D 
Sbjct: 339 ELEFFNKRIDTKLFERLNCTLNNEFIRLPYT----------DAVKILNNSFSSKIKWGDD 388

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
             R   + +  +        +  +P            D       +L    +       E
Sbjct: 389 LQREDEKNLITHFNGVPV-FVIDWPKQIKPFYTRENDDQTTVSNMDLLVPEV------GE 441

Query: 278 LLDPIEQRHRFEKEM-QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTG 335
           L+    +  R+EK + + K+   +E       +L           G  +GF+R +  VTG
Sbjct: 442 LIGGSIREERYEKLVQRIKELKMDENSY--SWYLDLRKYGSAPHGGFGLGFERFLQYVTG 499

Query: 336 ANNINEVIWTPF 347
             NI +VI  P 
Sbjct: 500 LQNIRDVIPIPR 511


>gi|315052496|ref|XP_003175622.1| asparaginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340937|gb|EFR00140.1| asparaginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 580

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 101/335 (30%), Gaps = 45/335 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHIRKPLYLQ 79
            L  R  +  + R+ F + Q +E+   ++  +     + +  F       D+  +  YL 
Sbjct: 276 VLKVRAAVVRAFRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEF-------DYYGEKAYLT 328

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S +   +  + A    +FC   ++R  +     H  E+T +E      ++  L+     
Sbjct: 329 QSSQLYLETCI-ASLGDVFCVCPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEE 387

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           II    +++                         AF +  N D         +       
Sbjct: 388 IICSVIDISMAD------------------PQIAAFVKQLNPDFQPPARPFRRMRYSEAI 429

Query: 199 LQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP-AD 255
               + GI    D      D  +     K+     IN   +L  +PA   A        D
Sbjct: 430 EWLNEHGINNEEDKPHSFGDDIAEAAERKM--TDIINKPILLTHFPAEIKAFYMKKDAED 487

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLAC 312
           PR T+  ++    +         +D  +     E     KK+  +        D+     
Sbjct: 488 PRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMAAYKKEGMDPAPYYWYTDQR---- 538

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                   G  +G +R +  + G   + E    P 
Sbjct: 539 KYGTSPHGGYGLGLERFLAWMCGRYTVRECSLYPR 573


>gi|85057873|ref|YP_456789.1| aspartyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|97196521|sp|Q2NIN3|SYD_AYWBP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84789978|gb|ABC65710.1| aspartyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 576

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 68/423 (16%), Positives = 123/423 (29%), Gaps = 87/423 (20%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            +   + FL++R+ I  S+R+  ++N F+E+++  L   +P     ++            
Sbjct: 132 RNPEVKHFLIQRHHITQSIRQTLLKNDFLELETPILSKSTPEGARDYLVPSRIYPGNFYA 191

Query: 72  IRK--------------PLYLQTS-------------PEF-------------------- 84
           + +                Y Q +             PEF                    
Sbjct: 192 LPQSPQLFKQLYMIAGFERYFQVARCFRDEDLRSDRQPEFSQIDIETSFLNQDEIMSLTE 251

Query: 85  ----------SCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP----EFTMLEWYRAHESYE 130
                       K LL       +  A      ++  L  P    +FT       +    
Sbjct: 252 EIIVDLFANIWKKPLLQPFLRLTYQQAFELYGSDKPDLRNPLKITDFTTFFDTNTYSQNI 311

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
              K     +   A +  +K+  +Q      F+   +  V +       I      D+  
Sbjct: 312 FAGKIKGFKVSKTAFLTRRKLDEYQLFFSKHFNLKLFSFVKKNDKIIGGISQFIQDDSFL 371

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDI-----------------FSRILIEKIEPNLGIN 233
           + +     +  ++  I  A     + +                     L E I+ +L   
Sbjct: 372 KNEEICFVVSGKKDIIHKALGIFRTKLALDLSLVDTTQEALLWIVDFPLFETIQEDLSPP 431

Query: 234 CCTILDRYP--APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                  +P  AP  A              ++L     E+      + +   Q   F   
Sbjct: 432 NRLYSLHHPFTAPRDATILKSNPQKALANAYDLVWNGYEVGGGSLRINNHQTQELIF--- 488

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                 +  E        +  L    P   GIA+G DRLVML T  NNI +VI  P +QS
Sbjct: 489 -SLLGFLQEEVQNRFGFLIEALKYGTPPHGGIALGLDRLVMLFTKTNNIKDVIAFPKTQS 547

Query: 351 NQE 353
            ++
Sbjct: 548 AKD 550


>gi|270005193|gb|EFA01641.1| hypothetical protein TcasGA2_TC007211 [Tribolium castaneum]
          Length = 470

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/354 (14%), Positives = 105/354 (29%), Gaps = 50/354 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH-------- 58
           H+R R       L  RN    ++  +F    F+ + +  L  +      E          
Sbjct: 139 HFRPRTHKFGALLRLRNAATLAIYNHFNSEGFVNVHTPVLTSNDCEGAGEVFKVVPDNKK 198

Query: 59  -IRAFSTELIIQD--HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL-HQ 114
            I++ + E   +D  +  +  +L  S +    + +A G  K++ F   +R        H 
Sbjct: 199 LIKSMAKESQAEDEVYFNQKSFLTVSGQLHL-EAVAHGLSKVYTFGPTFRAENSKSRLHL 257

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF MLE   A       +  C+  +         K     ++      + + ++     
Sbjct: 258 SEFYMLEGEIAFVEKLDGLMTCIEQLIKQV----TKKLVNDSIEDIEKCQEKKVSFDWLD 313

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             +  +     +    Q           + G    H+    + F ++    I        
Sbjct: 314 KSFPVVTYKEAVTILSQNKDKFSENFDSKDGFGKEHEMFLVEYFGKVPTFVI-------- 365

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
                 +P            D        L     E+        +            + 
Sbjct: 366 -----DWPKDMKPFYMKDNGDGTVAALDLLGPNVGEVVGGSLRENNYE----------KL 410

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +KI N    +D  +L         + G  +GF+R + L+ G +NI + I  P 
Sbjct: 411 LEKIPNSNGHLDW-YLDLRKFGSVPTGGFGLGFERYLQLILGISNIKDTIPFPR 463


>gi|91081349|ref|XP_970908.1| PREDICTED: similar to aspartyl-tRNA synthetase [Tribolium
           castaneum]
          Length = 456

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/354 (14%), Positives = 105/354 (29%), Gaps = 50/354 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH-------- 58
           H+R R       L  RN    ++  +F    F+ + +  L  +      E          
Sbjct: 125 HFRPRTHKFGALLRLRNAATLAIYNHFNSEGFVNVHTPVLTSNDCEGAGEVFKVVPDNKK 184

Query: 59  -IRAFSTELIIQD--HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL-HQ 114
            I++ + E   +D  +  +  +L  S +    + +A G  K++ F   +R        H 
Sbjct: 185 LIKSMAKESQAEDEVYFNQKSFLTVSGQLHL-EAVAHGLSKVYTFGPTFRAENSKSRLHL 243

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF MLE   A       +  C+  +         K     ++      + + ++     
Sbjct: 244 SEFYMLEGEIAFVEKLDGLMTCIEQLIKQV----TKKLVNDSIEDIEKCQEKKVSFDWLD 299

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             +  +     +    Q           + G    H+    + F ++    I        
Sbjct: 300 KSFPVVTYKEAVTILSQNKDKFSENFDSKDGFGKEHEMFLVEYFGKVPTFVI-------- 351

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
                 +P            D        L     E+        +            + 
Sbjct: 352 -----DWPKDMKPFYMKDNGDGTVAALDLLGPNVGEVVGGSLRENNYE----------KL 396

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +KI N    +D  +L         + G  +GF+R + L+ G +NI + I  P 
Sbjct: 397 LEKIPNSNGHLDW-YLDLRKFGSVPTGGFGLGFERYLQLILGISNIKDTIPFPR 449


>gi|94985238|ref|YP_604602.1| asparaginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|123079901|sp|Q1IZA1|SYN_DEIGD RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|94555519|gb|ABF45433.1| asparaginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 449

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 64/351 (18%), Positives = 118/351 (33%), Gaps = 32/351 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R    L  R+ ++ ++ E+F +  FI  D+     +    T      
Sbjct: 119 LDHRHLWLRHR--RPWAILRVRDCVERAIVEFFHQEGFIRFDAPFFTPNAAEGT------ 170

Query: 64  TELIIQDHIRKP-LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           TEL   D   +   YL  + +   +    A   K++ F   +R  +     H  EF M+E
Sbjct: 171 TELFEIDLFGEDKAYLSQTGQLHAEAGALA-FGKVYTFGPTFRAEKSKTRRHLLEFWMVE 229

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  +++  M     ++        ++  +   V     ++ +        A   N  
Sbjct: 230 PEVAPATHQDNMDLQERLVSFLVRRVLEECAAELAVLGRDVAKLQ-------PAAEGNYP 282

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             T  +  D   RH+                 W D         +  +   +   I++RY
Sbjct: 283 RVTYTEALDIIRRHIAEGDLPPNVQPDVQPVEWGDDLGAPHETILGFH--FDRPVIVERY 340

Query: 242 PAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           PA   +      PADPR     +     +       E++       R       K +I  
Sbjct: 341 PAAIKAFYMQPDPADPRLALCDD-----MIAPEGYGEIIGGS---ERIHDYTLLKARIEG 392

Query: 301 ETYPI--DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E  P+   + +L          +G  MG +R++  +TG ++I E I  P  
Sbjct: 393 EGLPLSAFDWYLDLRRFGSVPHAGFGMGLERVIAWITGIDHIREAIPFPRM 443


>gi|72387914|ref|XP_844381.1| asparaginyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62358589|gb|AAX79049.1| asparaginyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70800914|gb|AAZ10822.1| asparaginyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 746

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 58/353 (16%), Positives = 114/353 (32%), Gaps = 46/353 (13%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTE 65
           D H   R       L  R+ +  + REYF      E+   +L      G  T        
Sbjct: 415 DRHLVIRGTYGSTTLKVRHELIRAFREYFWSKGMYEVTPPTLVGTQCEGGST-------- 466

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
           L    +  K  YL  S +    +   A    ++C   ++R  +     H  E+T LE   
Sbjct: 467 LFDVMYYGKKAYLTQSSQLYL-EACTASLGDVYCLLSSYRAEKSKTKRHLSEYTHLEVEY 525

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A  ++E+++    ++I     +  +     +  +   F  P+ +       R    D   
Sbjct: 526 AVCNFEEMLTYIEDLIVSVFNMVIE-----RVGDLIAFMNPKQLVDPNGNPR----DPKN 576

Query: 185 TLDNPDQPDRHLLYLQAQQ-------AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
               P +P R L Y  A +                 + +  +      +   +G     +
Sbjct: 577 WKLAPKKPFRRLKYADAIKFCNEHNILNPETNEPFKFGEDITDQPERAMVGMIGEI--VL 634

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEK 295
           +  +PA   S        D R T+  ++ A  I E+      + D  E          ++
Sbjct: 635 MTHFPAEMKSFYMARDDHDNRLTESVDVLAPGIGEVVGGSMRMWDYDELME-----AYKR 689

Query: 296 KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + +  E Y     +            G  +G +RL++ +   +++ +    P 
Sbjct: 690 EGLDPEVYY---WYTEQRKYGSTPHGGFGLGLERLLVWLLDLDSVRDACLFPR 739


>gi|260947816|ref|XP_002618205.1| asparaginyl-tRNA synthetase [Clavispora lusitaniae ATCC 42720]
 gi|238848077|gb|EEQ37541.1| asparaginyl-tRNA synthetase [Clavispora lusitaniae ATCC 42720]
          Length = 552

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/347 (14%), Positives = 102/347 (29%), Gaps = 48/347 (13%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTE 65
             H   R          R  + +S+R +F E    E+    +      G  T        
Sbjct: 235 QRHLTMRGETLSSVFKVRAALLTSMRRFFQEEGLTEVTPPCMVQTQVEGGST-------- 286

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYR 124
           L   D+  +  YL  S +   +  L A    ++C   ++R  +     H  E+T +E   
Sbjct: 287 LFKLDYYGEEAYLTQSSQLYLETCLPA-LGDVYCVQESFRAEKSHTRRHLSEYTHIESEL 345

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A  S++ L+     +     +   +   +                      +  N D   
Sbjct: 346 AFLSFDDLLNHLEKLFTTVMKYVLEDPVAG------------------PLIKKLNPDFQV 387

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                 +           + GI         + D  +     K+     +N   +L R+P
Sbjct: 388 PQMPFKRMTYVEALDWLNEHGIPNEEGSAFKFGDDIAEAAERKMTDT--LNVPILLTRFP 445

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
               S        DPR T+  ++   N+         +D  ++         +++ +  +
Sbjct: 446 VEIKSFYMKKCADDPRVTESVDVLMPNVGEVTGGSMRIDDYDELVA----AIKREGLDLD 501

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            Y     F+           G  +G +R++  +     + E    P 
Sbjct: 502 AYY---WFVDQRKYGTCPHGGYGLGTERILAWLCNRYTVRECSLYPR 545


>gi|147919871|ref|YP_686378.1| asparaginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110621774|emb|CAJ37052.1| asparaginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 430

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/347 (15%), Positives = 106/347 (30%), Gaps = 44/347 (12%)

Query: 11  NRDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTEL 66
            R  H R +     +  ++ + SS RE+F  + F E+     +  S    +        L
Sbjct: 119 LRHLHIRSKELVAIMKVKDSVLSSCREWFRASGFYEVTPPIIMSSSCEGGS-------TL 171

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
               +  +  YL  S +   + L+    EK++    ++R  +     H  E+  +E   A
Sbjct: 172 FELKYFDEKAYLSQSAQLYLESLIFG-LEKVYSVTPSFRAEKSRTTRHLAEYWHIEGEMA 230

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
                +++     ++        ++                         R    D    
Sbjct: 231 WVGLYEMIDMLEQLVSYVCNKTAEERHEE--------------------LRMLGSD-PEY 269

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
             N   P   + Y +A +       D  W D F      ++  ++  +    +  YP   
Sbjct: 270 FKNLKPPFPRITYDEAVKILQADGFDFKWGDDFGTHEERQL--SMHYDKPLFITEYPLEV 327

Query: 246 SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            A       + +      +      E+    +   D      R  K+ ++  K     + 
Sbjct: 328 KAFYMKDAGNAKVLNVDMIAPRGFGEIIGGSERETDLALLEERIRKQGEDPAKYG---WY 384

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           +D             SG  MG +RLV  +    +I + I  P + S 
Sbjct: 385 LDLR----RYGSVPHSGFGMGAERLVRWICNQEHIRDTIPYPRTISR 427


>gi|261327549|emb|CBH10525.1| asparaginyl-trna synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 746

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/353 (16%), Positives = 113/353 (32%), Gaps = 46/353 (13%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTE 65
           D H   R       L  R+ +  + REYF      E+   +L      G  T        
Sbjct: 415 DRHLVIRGTYGSTTLKVRHELIRAFREYFWSKGMYEVTPPTLVGTQCEGGST-------- 466

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
           L    +  K  YL  S +    +   A    ++C   ++R  +     H  E+T LE   
Sbjct: 467 LFDVMYYGKKAYLTQSSQLYL-EACTASLGDVYCLLSSYRAEKSKTKRHLSEYTHLEVEY 525

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A  ++E+++    ++I        +     +  +   F  P+ +       R    D   
Sbjct: 526 AVCNFEEMLTYIEDLIVSVFNTVIE-----RVGDLIAFMNPKQLVDPNGNPR----DPKN 576

Query: 185 TLDNPDQPDRHLLYLQAQQ-------AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
               P +P R L Y  A +                 + +  +      +   +G     +
Sbjct: 577 WKLAPKKPFRRLKYADAIKFCNEHNILNPETNEPFKFGEDITDQPERAMVGMIGEI--VL 634

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEK 295
           +  +PA   S        D R T+  ++ A  I E+      + D  E          ++
Sbjct: 635 MTHFPAEMKSFYMARDDHDNRLTESVDVLAPGIGEVVGGSMRMWDYDELME-----AYKR 689

Query: 296 KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + +  E Y     +            G  +G +RL++ +   +++ +    P 
Sbjct: 690 EGLDPEVYY---WYTEQRKYGSTPHGGFGLGLERLLVWLLDLDSVRDACLFPR 739


>gi|212543017|ref|XP_002151663.1| aspartyl-tRNA synthetase Dps1, putative [Penicillium marneffei ATCC
           18224]
 gi|210066570|gb|EEA20663.1| aspartyl-tRNA synthetase Dps1, putative [Penicillium marneffei ATCC
           18224]
          Length = 567

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 85/287 (29%), Gaps = 18/287 (6%)

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
           E+    +  K  YL  SP+   +  +A   E +F     +R        H  EFT L++ 
Sbjct: 290 EVFEVKYFNKKGYLAQSPQLMKQMAIAGDMESVFEVGPVFRAENSNTHRHLTEFTGLDFE 349

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +    +   + D    +        ++ +  +                    +   ++  
Sbjct: 350 KTFRHHYHEVLDFAEELLVFILTELKERYKDEIAVIQKSYPKAGDFKLPKDGKALRLNYM 409

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
             +    +        +A +     A +     I                   +LDR+P 
Sbjct: 410 DGVALLKEAGVDTSEQEAFENDFTTAMEKKLGQIIREKYD---------TDFYVLDRFPM 460

Query: 244 PESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                     P DP F+  ++ +    E+ +    + D  E            KK  +  
Sbjct: 461 AVRPFYTKADPEDPTFSHSYDFFMRGEEIMSGAQRINDVKELEE------SMIKKGVDPK 514

Query: 303 YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               ED+L       P  +G  +G +R+VM   G  N+      P  
Sbjct: 515 TEGFEDYLNAFRQGCPPHAGGGLGLNRIVMFFLGLPNVRLATLFPRD 561


>gi|324508990|gb|ADY43790.1| Asparaginyl-tRNA synthetase [Ascaris suum]
          Length = 549

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/351 (16%), Positives = 116/351 (33%), Gaps = 43/351 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
            + ++    R     R   L  R  +  ++RE+F    + EI   +L      G  T   
Sbjct: 229 MLDNRHLVIRGEKAAR--VLRIRAAVTRAMREHFHAAGYTEISPPTLVQTQVEGGST--- 283

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   D+  +P YL  S +   +  L +    ++C A ++R  +     H  E++ 
Sbjct: 284 -----LFALDYFGEPSYLTQSSQLYLETCLPS-LGDVYCIAQSYRAEKSRTRRHLAEYSH 337

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   A  ++++LM+   +++    +       +   +    F  P++      F R   
Sbjct: 338 VEAECAFLTFDELMEKIESLVCDTVDRLMADPVTKAMIE---FVNPDFTPPKRPFMRLRY 394

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            D    L   D  +                +   + +  +      +     IN    L+
Sbjct: 395 GDAIKWLQEHDVKN-------------EFGNRFEYGEDIAEAAERYMTDT--INQPIFLN 439

Query: 240 RYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKK 297
           R+PA   +        D   T+  +L    + E+      +    +    FE       +
Sbjct: 440 RFPAGIKAFYMQRDAEDNTLTESVDLLMPTVGEIVGGSMRIWKEDDLIKAFEG-----AQ 494

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           I  E Y     ++           G  +G +R V  +T   +I +V   P 
Sbjct: 495 ISPEHYY---WYVDQRKYGTCPHGGYGLGLERFVCWLTNTYHIRDVCLYPR 542


>gi|319760547|ref|YP_004124485.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039261|gb|ADV33811.1| asparaginyl-tRNA synthetase [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 468

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 108/360 (30%), Gaps = 47/360 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL-- 66
            H R R  +       R+++  S+  +  +   + I +  +  +   E + + F      
Sbjct: 125 AHLRSRTHIFGAISRIRHILFQSMHNFMHKKGLLWIPTPIIT-AADTEGNSKMFYLSENF 183

Query: 67  ---------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG- 110
                            Q    K  +L  S + + +    A   K++ F   +R      
Sbjct: 184 NNKNISNNISTNQVNGEQFFFGKKAFLTVSGQLNLETYACA-LSKVYTFGPTFRAEHSDT 242

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF MLE   A      +++     +    ++  ++         N        + 
Sbjct: 243 NRHLSEFWMLEVEIAFSKLNDIIELAKAFLTNMIQIVLEQCTPDITYCSNH-------SQ 295

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
              F R  N               +LL    +     V       D+FS       E   
Sbjct: 296 CNLFKRLENFLNNKIAYIEYTDAINLLISCNKNFKNTVFWG---GDLFSEHEKYLSEE-- 350

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                 I+  YP    A       D +     ++    I       E++   ++  R   
Sbjct: 351 YFKSPVIIMNYPKNIKAFYMRLNDDNKTVASMDILVPGI------GEIIGGSQREERLNI 404

Query: 291 EMQEKKKIYNETYPIDEDF--LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            ++E+    N +      +  L         SG  +GF+RL++ +TG  NI + I  P  
Sbjct: 405 -LKERLLENNLSNKYYWWYQDLR-RYGTVPHSGFGLGFERLLIYITGITNIKDAIPFPRV 462


>gi|187933734|ref|YP_001886695.1| aspartyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|187721887|gb|ACD23108.1| aspartate--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 429

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/341 (15%), Positives = 113/341 (33%), Gaps = 39/341 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H +        N+I +  R++   N F EI +  +    G E     F  +   ++   
Sbjct: 122 RHEKVSSIFKIENIIANGFRKFLNNNGFTEISTPKIVNE-GAEGGSEVFKLKYFEKNA-- 178

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQ 131
              YL  SP+F  + ++ AG E++F  +H +R  E     H  E+  ++      E  + 
Sbjct: 179 ---YLAQSPQFYKQMMVGAGFERVFEISHVYRAEEHNTTRHLNEYVSMDLEMGFIEDEKD 235

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +++   +    +   +                        N ++    +   +
Sbjct: 236 IMDLEEELLKFILDKVKIEGKKY--------------------LELLNAEIPIIENTIPR 275

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                     +    +V   D       +++ + I+     +    L  YP  +  +  +
Sbjct: 276 MKFSEAIEILKNEYNKVEESDDMDTEGEKLICQYIKEKYNSD-FVFLTHYPRKKRPMYTM 334

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            P     T  F+L    +E+      + +              K K +N      E +++
Sbjct: 335 -PCGEDETHSFDLLFRGLEITTGGQRIHEYNMLIE------NMKYKGFNPQNY--ESYIS 385

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                M    G+A+G +R+   + G  N+ E    P  ++ 
Sbjct: 386 NFKYGMMPHGGLAIGLERITCRMLGIENVREGSLIPRDRTR 426


>gi|320033392|gb|EFW15340.1| aspartyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 922

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 106/343 (30%), Gaps = 45/343 (13%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     +++I S  R       FIEI +  LQ +   E+    FS              
Sbjct: 267 SQSIFRIQSVISSYFRSTLDSMGFIEIHTPKLQGAA-TESGASVFS-------------- 311

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
                  + +  +A+  E+++     +R        H  E+T L+   A E +     + 
Sbjct: 312 ------LAKQMAIASDFERVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHESLEV 365

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +              +          E +   +        +    L+         
Sbjct: 366 IDQVIKKIFEVIYGKHRREVQIVKHQFPSEDLVWLDKTPIITFSEGIRMLNESGWRTED- 424

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
               +    I    +    ++                   I+D++PA          P D
Sbjct: 425 GKELSDLEDISTRDEIRLGELV---------KEKYHTDYYIMDKFPASARPFYAMPDPND 475

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            RFT  ++++    E+ +    + +PI    R       ++   +      E+++     
Sbjct: 476 NRFTNAYDIFVRGQEIVSGGQRIHNPIMLEER------MRQMGVDPASM--EEYMEGFQW 527

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT---PFSQSNQEE 354
            +P  +G  +G +R++ML+    NI         P S   Q++
Sbjct: 528 GVPPHAGAGIGLERMLMLILKLGNIRLASMFHRDPKSFPAQDQ 570


>gi|309356245|emb|CAP37482.2| CBR-NARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 564

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 111/355 (31%), Gaps = 38/355 (10%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
            + ++    R  +  R   L  R     ++R++F    + E+   +L      G  T   
Sbjct: 231 MLDNRHLVIRGENASR--ILRIRAAATRAMRDHFFAASYTEVAPPTLVQTQVEGGST--- 285

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   D+  +P YL  S +    +   A    ++C A ++R  +     H  E+  
Sbjct: 286 -----LFGLDYYGEPAYLTQSSQLYL-ETCNAALGDVYCIAQSYRAEKSRTRRHLSEYQH 339

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   A  +++QLM    +++    +       +   +          +           
Sbjct: 340 VEAECAFITFDQLMDRIESLVCDTVDRLLADPVTAGLIQFVNPGYTAPVRPFRRMQYKEA 399

Query: 180 IDLGTTLDNPDQPDRHLLY--LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
           I      D  ++     +Y    A+ A  ++        I              I    +
Sbjct: 400 IAWLQENDVRNENGEKFVYGEDIAEAAERKMTDTIGVVSILFLY-------EKKIRAPIL 452

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           L+R+PA   +        D   T+  +L    +         +   +      + +   +
Sbjct: 453 LNRFPAGIKAFYMPRCEDDKDLTESVDLLMPGVGEIVGGSMRIWKED------EMLAAFE 506

Query: 297 KIYNET----YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +         + +D+             G  +G +R +  +TG N+I +V   P 
Sbjct: 507 RAGLSPTNYFWYMDQR----KYGSVPHGGYGLGLERFICWLTGTNHIRDVCLYPR 557


>gi|14520441|ref|NP_125916.1| asparaginyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|20139961|sp|Q9V251|SYN_PYRAB RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|5457656|emb|CAB49147.1| asnS asparaginyl-tRNA synthetase (EC 6.1.1.22) (asparagine--tRNA
           ligase) (ASNRS) [Pyrococcus abyssi GE5]
          Length = 434

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 106/351 (30%), Gaps = 47/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           +  +    R    +    +  +  +  + RE+ +   + E+    L      G  T    
Sbjct: 119 LDYRHLHIRS--PKVSAIMRVKETLIMAAREWLLREGWHEVFPPILVTGAVEGGAT---- 172

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L    +  K  YL  S +   +  +    EK++    ++R  +     H  EF  L
Sbjct: 173 ----LFKLKYFDKVAYLSQSAQLYLEAAIFG-LEKVWSLTPSFRAEKSRTRRHLTEFWHL 227

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A      +MK    ++    +   +       +                       
Sbjct: 228 ELEAAWMDLWDIMKVEEELVSYMVQRTLELRKKEIEMFR--------------------- 266

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D  TTL N + P   + Y +A +          W D         +      +    +  
Sbjct: 267 DDLTTLKNTEPPFPRISYDEAIEILQSKGVKIEWGDDMGADEERVL--TQEFDRPFFVYG 324

Query: 241 YPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKKI 298
           YP    +      P DPR     +     +       E++   E+   ++K + + K++ 
Sbjct: 325 YPKHIKAFYMKEDPNDPRKVLAAD-----MLAPEGYGEIIGGSEREDNYDKLVQRIKEEG 379

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +      E +L          SG  +G +RLV  V   ++I      P +
Sbjct: 380 MDPKDY--EWYLDLRKYGSVPHSGFGLGVERLVAWVLKLDHIRWATLFPRT 428


>gi|328860147|gb|EGG09254.1| hypothetical protein MELLADRAFT_34607 [Melampsora larici-populina
           98AG31]
          Length = 432

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 53/355 (14%), Positives = 99/355 (27%), Gaps = 40/355 (11%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST 64
            +  H R R       L  R+ +      Y     F + D   + ++       +    T
Sbjct: 95  RQHLHLRTRTGLMSSVLRLRSRMSDQASSYLNSLDFFKTDPPMISFNDCEGAGEVFRIQT 154

Query: 65  E---------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
           +         +   +   +P YL  S +    +  A G  +++     +R        H 
Sbjct: 155 DQPSTQVSKNVDDLEFFNQPAYLSVSSQLYL-EAFAHGLGRVYTLGPCFRAESSQTNRHL 213

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF MLE   +     + M   +  +     +           +     +       E  
Sbjct: 214 AEFWMLEVEVSFCEELEEMMRLVERLIKFIGLEVSDELESVWKSQGLEKKKSDKIKEELQ 273

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R   I      D        +                 W D       + +      + 
Sbjct: 274 TRCPRISYKEEEDVVGNRLSKV----------------EWGDSLGSEHEKWLAGVYFKSP 317

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  YP        +  +D +    F+L    I                 R  + ++E
Sbjct: 318 V-FITDYPKRIKPFYMLKNSDQQTVACFDLIVPGIGELVGGS---LREFNEERLRENVEE 373

Query: 295 KKKIYNETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           K  +      +D  F L         +G  +G+DRLV  ++G  N+ EVI  P +
Sbjct: 374 K-GMDGMDGKLDWYFDLRRF-GTNPHAGFGIGWDRLVCWISGIENVREVIGFPRT 426


>gi|70945745|ref|XP_742659.1| asparagine--t RNA ligase [Plasmodium chabaudi chabaudi]
 gi|56521765|emb|CAH79657.1| asparagine--t RNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 631

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 107/357 (29%), Gaps = 43/357 (12%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE---------- 56
           H R R          ++ +      YF +  +  I++  L  +    G E          
Sbjct: 287 HLRGRTKLYSSIFRLKSDLIIETFNYFKKKNYTYINTPILTSNDCEGGGELFHVTTSPNK 346

Query: 57  -----THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
                T      +    +   +KP YL  S + +  + L      +F    ++R      
Sbjct: 347 NKKAETGAENVDSINEKKLFFKKPCYLNVSSQLAL-ECLCCSIGDVFTINQSFRAENSNT 405

Query: 112 -LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF MLE   A      ++ +  N I+        K             + EYI  
Sbjct: 406 SRHLSEFLMLEIELAFSDLNHIILESENYIKEMINFVLHK-----------SEDIEYINE 454

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                   N++               + +  ++      + D      S    + +  N+
Sbjct: 455 HHDQNIKKNLEEILKKPFVIITYEEAIQILKKRNNSNGTNFDLSESDISFEDQKYLT-NI 513

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                 ++  YP            D +     ++   NI       E        +  ++
Sbjct: 514 YFKSPVVIINYPDSIKPFYMKLNDDKKTVSCMDVIFPNIGEIAGGSERETN---LNILKE 570

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +M++ K   +   P  E  L         SG  +G DRL+M +   +NI +++  P 
Sbjct: 571 QMKKNKLNIDLYNPYLE--LRK-YGNIPHSGFGLGIDRLIMYILSISNIRDIVPFPR 624


>gi|171683941|ref|XP_001906912.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941931|emb|CAP67583.1| unnamed protein product [Podospora anserina S mat+]
          Length = 573

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 115/334 (34%), Gaps = 38/334 (11%)

Query: 21  FLLKRNMIQSSL-----------REYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
            + KR+ +Q ++           R Y  E+ F E +   L  +  +E     F       
Sbjct: 248 VMHKRSYVQQAIADIRVEVKHLFRSYLREHGFKEFEPPCLI-AAASEGGANVFRLP---- 302

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHES 128
            +  K  +L  SP+F  +  + AG +++FC    +R        H  EFT L+       
Sbjct: 303 -YFEKEAFLAQSPQFYKQIEVLAGRKRVFCVGPVFRAENSNTPRHMTEFTGLDLEMEVTD 361

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           Y++ +     ++        +              E   +        +   + G  +  
Sbjct: 362 YQEALHMLEGVLLHIFRTIKKT----------CADEIALVRSVYPSEEFLLPEEGKEVRL 411

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                + LL  +  +    V+  +  S    + L   I+     +   +LD++P+     
Sbjct: 412 TFAEGQKLLREEGPEEFRNVSDFEDMSTPQEKALGALIKKKYNTD-FYVLDKFPSDARPF 470

Query: 249 ANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                P +P+ T  ++++    E+ +    + DP+E   R       + K  +   P   
Sbjct: 471 YAKEDPTNPKVTLAYDMFMRGQEILSGGQRIHDPVELEARL------RTKGVDPKSPGIR 524

Query: 308 DFLACLT--EMPQSSGIAMGFDRLVMLVTGANNI 339
           +++        P  +G  +G DR+V       ++
Sbjct: 525 EYVDLFRQVGAPPHAGGGIGLDRVVAWYLNLPSV 558


>gi|145229355|ref|XP_001388986.1| aspartyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134055090|emb|CAK43730.1| unnamed protein product [Aspergillus niger]
          Length = 952

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 56/311 (18%), Positives = 108/311 (34%), Gaps = 27/311 (8%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +     ++ I +  R    E  F+EI +  LQ S   E+    F  +     +  +  +
Sbjct: 283 SQSIFRIQSAICNLFRFALDEQGFMEIHTPKLQGSA-TESGASVFHVQ-----YFGRDAF 336

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+ + +  +AA   +++     +R        H  E+T L+   A E +   M D 
Sbjct: 337 LAQSPQLAKQMAIAADFGRVYEIGAVFRAENSNTHRHLTEYTGLDIEMAIEEHYHEMLDV 396

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +  +        +  +          E +   E        D    L++    D   
Sbjct: 397 LDAVIKSILQGVYGRYRREVETVKHQFPSEDVVWLEKTPILRFADGIKMLNDSGWRDED- 455

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPAD 255
                   G  +  D+         L E ++   G +   ILD++PA          P D
Sbjct: 456 --------GNPLPEDEDLHTRDEIRLGELVKEKYGTD-YYILDKFPASARPFYTMPDPDD 506

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            R+T  F+++    E+ +    + DP        +E   +  I  +T    ED++     
Sbjct: 507 DRYTNSFDIFVRGQEIVSGGQRIHDPHML-----EENMRRSGIDPDTM---EDYMEGFRW 558

Query: 315 EMPQSSGIAMG 325
             P  +G  +G
Sbjct: 559 GAPPHAGAGVG 569


>gi|239791673|dbj|BAH72272.1| ACYPI007430 [Acyrthosiphon pisum]
          Length = 279

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 102/304 (33%), Gaps = 34/304 (11%)

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +     +       +    + +   YL  SP+   +  +A   +++F     +R  
Sbjct: 1   MINAASEGGAN-------VFTISYFKGSAYLAQSPQLYKQMAIAGDFDRVFTIGAVFRAE 53

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +     H  EF  L+   A + +   + D +  +        +  +  +           
Sbjct: 54  DSNTYRHLTEFVGLDLEMAFKYHYHEVVDVIGSLFTNIFKGLRDNYQSEIKTICEQYP-- 111

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                        ++    LD P + +        ++AG+ +  +D  S    ++L   +
Sbjct: 112 -------------VEPFKFLDPPLKLEFPTAVNMLREAGVEMGDEDDLSTPNEKLLGRLV 158

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKR-FELYACNIELCNACDELLDPIEQR 285
           +     +   ILD++P        +   D +     ++++    E+ +    + D     
Sbjct: 159 KAKYDTD-FYILDKFPLAIRPFYTMPDPDSKVASNSYDMFMRGEEILSGAQRIHDFDYLI 217

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
            R +    + +KI          ++       P  +G  +G +R+VML  G +NI +V  
Sbjct: 218 ERAKHHQVDIEKI--------AAYIDAFRYGCPPHAGGGIGLERVVMLYLGLDNIRKVSM 269

Query: 345 TPFS 348
            P  
Sbjct: 270 FPRD 273


>gi|268562070|ref|XP_002646595.1| C. briggsae CBR-NRS-1 protein [Caenorhabditis briggsae]
          Length = 551

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 113/353 (32%), Gaps = 47/353 (13%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
            + ++    R  +  R   L  R     ++R++F    + E+   +L      G  T   
Sbjct: 231 MLDNRHLVIRGENASR--ILRIRAAATRAMRDHFFAASYTEVAPPTLVQTQVEGGST--- 285

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   D+  +P YL  S +    +   A    ++C A ++R  +     H  E+  
Sbjct: 286 -----LFGLDYYGEPAYLTQSSQLYL-ETCNAALGDVYCIAQSYRAEKSRTRRHLSEYQH 339

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   A  +++QLM    +++    +       +        F  P Y      F R   
Sbjct: 340 VEAECAFITFDQLMDRIESLVCDTVDRLLADPVTAG---LIQFVNPGYTAPVRPFRRMQY 396

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            +    L   D  +                    + +  +     K+   +G+    +L+
Sbjct: 397 KEAIAWLQENDVRN-------------ENGEKFVYGEDIAEAAERKMTDTIGV--PILLN 441

Query: 240 RYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           R+PA   +        D   T+  +L    +         +   +      + +   ++ 
Sbjct: 442 RFPAGIKAFYMPRCEDDKDLTESVDLLMPGVGEIVGGSMRIWKED------EMLAAFERA 495

Query: 299 YNET----YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                   + +D+             G  +G +R +  +TG N+I +V   P 
Sbjct: 496 GLSPTNYFWYMDQR----KYGSVPHGGYGLGLERFICWLTGTNHIRDVCLYPR 544


>gi|15829242|ref|NP_326602.1| asparaginyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|20139911|sp|Q98PF2|SYN_MYCPU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|14090186|emb|CAC13944.1| ASPARAGINYL-TRNA SYNTHETASE (ASPARAGINE--TRNA LIGASE) (ASNRS)
           [Mycoplasma pulmonis]
          Length = 450

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 56/354 (15%), Positives = 114/354 (32%), Gaps = 31/354 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPG---NET 57
           +  IP     +R    +    +L R+ I   + EYF +N F  + +  +  + G    ET
Sbjct: 116 LRTIP--HLRHRSNTIK--AVMLVRSSISFFIHEYFQKNDFSLVAAPIITSNDGEGAGET 171

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPE 116
            I     +            L  + +   +       +K++ FA  +R        H  E
Sbjct: 172 FIVDSE-DKEPFFGNNVKATLGVTGQLHAEAYALG-LQKVYTFAPTFRAENSNTKKHAAE 229

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           F M+E   A  + ++L++    +++   +   +K                  ++ +    
Sbjct: 230 FWMVEPEVAFFTLKELIQMSEEMLKYVIKKVLEKRRDELVFLDTHIKPGLIQSLEDFLE- 288

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEKIEPNLGINCC 235
                      N +  +   +    ++  +     +  +           I         
Sbjct: 289 ----------SNLEIIEYRKVIEILEKNKVFFEEQNIEFGMDLKTEHERFIAEKYAKGPV 338

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQE 294
             +  YP    A       D      F+L    I EL           +   R ++   +
Sbjct: 339 -GVINYPKKLKAFYMYQNDDNETVAAFDLLVPGIGELVGGSQRENRYEKLEQRIQELNID 397

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +K   +  + +D   L        S+G  +G +RLVM +TG +NI + I  P +
Sbjct: 398 QK---DIQWYLD---LRK-YGYSGSAGFGLGLERLVMYITGIDNIRDSIPFPRT 444


>gi|297624293|ref|YP_003705727.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165473|gb|ADI15184.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 435

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 103/353 (29%), Gaps = 49/353 (13%)

Query: 5   PSQPWWNRDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
           P      R    R    R  L  +  +  + RE      F EI +  L            
Sbjct: 117 PDTLLEYRHVSLRSPKARAALKVQAELVRAFREVLSAEGFTEIFTPKLVA------AGAE 170

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTML 120
               L   D+  K  YL  SP+   K+++    E++F  A  +R        H  E+  L
Sbjct: 171 GGAALFEVDYYGKRAYLAQSPQLY-KQIMVGVFERVFEVAPVYRAELSHTSRHLSEYLSL 229

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +        ++ +      +  A      +  + +                         
Sbjct: 230 DVELGFIDSDEDVMALEERLLKAMMRDVAERCAPEFALL--------------------- 268

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS----RILIEKIEPNLGINCCT 236
             G    +   P   L  L+A+          T          R++    +   G +   
Sbjct: 269 --GAAAPDLSAPFPRLTLLEARALVRERYGHQTGGKDLDPEAERLVGRWAKEERGSD-FV 325

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            +  YP          P D   T+ F+L    +E+ +    + +          +++ + 
Sbjct: 326 FVTNYPQAARPFYTY-PTDDGLTRGFDLLFRGVEITSGGQRVHEYGT----LIAQLRARN 380

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +  E +     +L      MP   G A+G +RL  L+ G  N+      P  
Sbjct: 381 -LDPEAF---RGYLEVFKYGMPPHGGFAIGAERLTALLLGIANVRFARAFPRD 429


>gi|58382414|ref|XP_311928.2| AGAP002969-PA [Anopheles gambiae str. PEST]
 gi|55241789|gb|EAA07595.2| AGAP002969-PA [Anopheles gambiae str. PEST]
          Length = 557

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 116/365 (31%), Gaps = 76/365 (20%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           + D     R  +++          R+++  + R ++ +  + E+   +L      G  T 
Sbjct: 234 HPDVQLDNRHIMIRGENTSKILKMRDVVMQAFRSHYFDRGYTEVTPPTLVQTQVEGGAT- 292

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   D+  +  +L  S +   +  + A    +FC A ++R  +     H  E+
Sbjct: 293 -------LFKLDYFGEEAFLTQSSQLYLETCIPA-LGDVFCVAQSYRAEQSRTRRHLAEY 344

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS-----EPEYITVAE 172
           + +E      +++ L+    ++I    +   +  + +     NP           +  A+
Sbjct: 345 SHIEGECPFITFDDLLDRLEDLICDVVDRVLKSPWGYMVQELNPGFVAPKRPFRRMNYAD 404

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                                  +++L+             + +        K+     I
Sbjct: 405 ----------------------AIVWLKENNVTKEDGSFYEFGEDIPEAPERKMTDT--I 440

Query: 233 NCCTILDRYPAPE-SALANIYPADPRFTKRFEL-------YACNIELCNACDELLDPIEQ 284
           N   +L R+PA   S        DPR T+  ++                  DELLD    
Sbjct: 441 NEPIMLCRFPAEIKSFYMAKCEDDPRLTESVDVLLPNVGEIVGGSMRSWKYDELLDGY-- 498

Query: 285 RHRFEKEMQEKKKIYNET--YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
                    +++ I  +   + +D+     +       G  +G +R +  +    +I EV
Sbjct: 499 ---------KREGIDPKPYYWYVDQR----VYGTEPHGGYGLGLERFLCWLLNRYHIREV 545

Query: 343 IWTPF 347
              P 
Sbjct: 546 CLYPR 550


>gi|50419493|ref|XP_458273.1| DEHA2C13684p [Debaryomyces hansenii CBS767]
 gi|59798687|sp|Q6BU46|SYNC_DEBHA RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|49653939|emb|CAG86350.1| DEHA2C13684p [Debaryomyces hansenii]
          Length = 552

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 51/352 (14%), Positives = 107/352 (30%), Gaps = 49/352 (13%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            +  R+ +  ++R +F E   +E+    +      G  T 
Sbjct: 228 DPSLLLDQRHLALRGESLSAVMKVRSTLLQAIRRFFAEEGLLEVTPPCMVQTQVEGGST- 286

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   D+  +  YL  S +   +  L A    +FC   ++R  +     H  E+
Sbjct: 287 -------LFKMDYYGEEAYLTQSSQLYLETCLPA-LGDVFCVQESFRAEKSHTRRHLSEY 338

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E       ++ L+     +I    +   +   +   +       P ++     F R 
Sbjct: 339 THIESELGFIEFDDLLTHLERLITYVVKYVVEDPVAGPLIKQLN---PNFVPPQMPFKRM 395

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
             I     L+    P+                    + D  +     K+   +G+    +
Sbjct: 396 EYIHALDWLNEHGIPNED-------------GEKFKFGDDIAEAAERKMTDTIGV--PIL 440

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           L R+P    S        DPR T+  + L     E+        D  E          ++
Sbjct: 441 LIRFPVEIKSFYMQKCADDPRVTESVDVLMPTVGEITGGSMRTYDNDELVA-----AIKR 495

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + +  ++Y    D            G  +G +R++  +     + +    P 
Sbjct: 496 EGLDLDSYYWFTD--QRKYGTCPHGGYGLGTERILAWLCDRFTVRDCSLYPR 545


>gi|315230963|ref|YP_004071399.1| asparaginyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183991|gb|ADT84176.1| asparaginyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 430

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/352 (13%), Positives = 106/352 (30%), Gaps = 49/352 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           +  +    R    +    +  +  +  + RE+ +++ + E+    L      G  T    
Sbjct: 115 LDVRHLHLRS--PKVAAIMKVKATMIQAAREWLLQDGWYEVFPPILVTGAVEGGAT---- 168

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L    +  K  YL  S +   +  +    EK++    ++R  +     H  EF  L
Sbjct: 169 ----LFKLKYFDKTAYLSQSAQLYLEAAIFG-LEKVWSLTPSFRAEKSRTRRHLTEFWHL 223

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A      +MK    ++    +                  E     +      +  +
Sbjct: 224 ELEAAWMDLWDIMKVEEELVSYMVQ---------------RTLELRRKEIEMYRKDFTTL 268

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                       D  +  LQ++   I       W +         +      +    +  
Sbjct: 269 KNTEPPFPRISYDEAIDILQSKGVNIE------WGEDMGADEERVLTEE--FDRPFFVYG 320

Query: 241 YPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKK 297
           YP    +      P+DPR     +     +       E++   E+   ++K  +   ++ 
Sbjct: 321 YPKHIKAFYMKEDPSDPRKVLAAD-----MLAPEGYGEIIGGSEREDDYDKLVQRILEEG 375

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +  + Y   E +L          SG  +G +R+V  +   +++      P +
Sbjct: 376 MDPKDY---EWYLDLRKYGSVPHSGFGLGVERVVAWILNLDHVRWATLFPRT 424


>gi|320105485|ref|YP_004181075.1| asparaginyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924006|gb|ADV81081.1| asparaginyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 455

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/351 (16%), Positives = 101/351 (28%), Gaps = 38/351 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAF 62
           +  +  W R    R+   L  R  I  +  EYF  N F   D   L  +     + +  F
Sbjct: 125 MEHRHLWMRT--PRQSAILRVRATIMRAAAEYFDTNGFTRTDPPILTPNACEGTSEL--F 180

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             E   Q       YL  S +   +    A   K++ F   +R  +     H  EF M+E
Sbjct: 181 EMEYFDQG----NAYLTQSGQLYIEATALA-LGKVYSFGPTFRAEKSKTRRHLTEFWMIE 235

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKI---FSFQNVNCNPFSEPEYITVAEAFARYA 178
              A    + LM      +         +          +                  + 
Sbjct: 236 PEVAFLELDGLMDLSEAFLTHIVTTVLAQHRAELKVIGRDIAVLEAVVAPGPNGERVPFP 295

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            +      +  ++     L   A + G          D F       I      +   ++
Sbjct: 296 RLSYDQAHEMLEEAFSKGLIETAHKPG----------DDFGSPDETYISSQ--FDKPVLI 343

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
            RYP    +      P DP  T   ++            E++       R       K +
Sbjct: 344 HRYPTAIKAFYMQPDPVDPARTLCLDV-----LAPEGYGEIIGGS---QRIHDYDLLKSR 395

Query: 298 IYNETYPID--EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           I     P+D  + +L          +G  MG +R V  + G +++ E I  
Sbjct: 396 IEQHGLPLDAFQWYLDLRRYGSVPHAGFGMGIERAVAWICGLDHVRETIPF 446


>gi|18252211|gb|AAL61938.1| aspartate--tRNA ligase - like protein [Arabidopsis thaliana]
 gi|27311923|gb|AAO00927.1| aspartate--tRNA ligase - like protein [Arabidopsis thaliana]
          Length = 405

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/339 (14%), Positives = 98/339 (28%), Gaps = 45/339 (13%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPL 76
           +     +  ++ + RE      F+ I +  L    S G     R         ++  +P 
Sbjct: 97  QAIFQLQYEVEYAFREKLRFKNFVGIHTPKLMAGSSEGGSAVFR--------LEYKGQPA 148

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKD 135
            L  SP+   +  +     ++F     +R  +     H  EF  L+       +   + D
Sbjct: 149 CLAQSPQLHKQMAICGDLRRVFEVGPVFRAEDSFTHRHLCEFVGLDVEMEIRKHYSEIMD 208

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++ +      +  +    +          E +       R                   
Sbjct: 209 LVDELFVFIFTSLNERCKKELQAVGKQYPFEPLKFLPKTLRLT---------------FE 253

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPA 254
                 ++AG+ V      +    R L + +          IL RYP        +    
Sbjct: 254 EGVQMLKEAGVEVDPLGDLNTESERKLGQLVLEKYNTE-FYILHRYPKAVRPFYTMTCAD 312

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFL 310
           +P ++  F+++    E+ +    +  P     R                 ID      ++
Sbjct: 313 NPLYSNSFDVFIRGEEIISGAQRVHIPEVLEQR---------AG---ECGIDVKTISTYI 360

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P   G  +G +R+VML    NNI +    P  
Sbjct: 361 DSFRYGAPLHGGFGVGLERVVMLFCALNNIRKTSLFPRD 399


>gi|194882351|ref|XP_001975275.1| GG20650 [Drosophila erecta]
 gi|190658462|gb|EDV55675.1| GG20650 [Drosophila erecta]
          Length = 460

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/361 (16%), Positives = 113/361 (31%), Gaps = 57/361 (15%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R       +  R+  Q ++ +Y  E  F++I++  L  +          F  + 
Sbjct: 124 HLHLRSRVDFVAAQMRVRHKAQKAIHDYMDEQNFVQINTPLLTTNDCEGAGE--VFRVQP 181

Query: 67  IIQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
             ++               +    ++L  S +    + +  G    +  + A+R      
Sbjct: 182 DSENLLKQMNRPNIPVEQSYFDGKVFLTVSGQLHL-EAMTYGLGNTYTLSPAFRAENSKS 240

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
            LH  EF M E   A   + + ++     I    +    ++      + +          
Sbjct: 241 PLHLAEFYMFEAELA---HLEELEKLAKFIEQMLKSVTNRLLETSAEDLSF--------C 289

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            +  +  +++            D  L  LQ  +  ++     T    FS+     +  + 
Sbjct: 290 QKNSSSVSDLPWLQVPWTIISYDDALQVLQENKDSLKTPISLTEG--FSKDQELFLVAHC 347

Query: 231 GINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRF 288
           G      +  +PA +          +P      +L    + ELC       DP   R   
Sbjct: 348 G--APVFIVDWPAEQKPFYMKVSRTNPNRVHALDLLMPAVGELCGGSLRECDPSILRSH- 404

Query: 289 EKEMQEKKKIYNETYPID-EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                          P D E ++         + G  MGF+R + LVTG  NI +VI  P
Sbjct: 405 ------------PQLPKDLEWYVDLRKYGGIPTGGFGMGFERYLQLVTGVKNIRDVIPFP 452

Query: 347 F 347
            
Sbjct: 453 R 453


>gi|241957635|ref|XP_002421537.1| asparagine--tRNA ligase, putative; asparaginyl-tRNA synthetase,
           mitochondrial precursor, putative [Candida dubliniensis
           CD36]
 gi|223644881|emb|CAX40879.1| asparagine--tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 489

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/341 (16%), Positives = 103/341 (30%), Gaps = 28/341 (8%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH-IRAFSTELIIQDHIRKPL 76
           FL  R+ ++  L E+F    FI++    +  S      E   I   +     +    K  
Sbjct: 156 FLRLRSHLEFKLMEFFQSQDFIKVTPPLITSSDCEGAGEVFKIEPLNDNDPKEPFFGKNA 215

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE-SYEQLMK 134
           YL  S +    + LA    + +     +R        H  EF MLE   +H    +Q+  
Sbjct: 216 YLTVSTQLHL-ECLALALNRAWTLTPCFRAENSKTTRHLSEFWMLEAEISHVVDVDQVTT 274

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI--TVAEAFARYANIDLGTTLDNPDQP 192
              N+IR   +   +        N    +  +Y+  T  E     +      + +   + 
Sbjct: 275 FTENMIRFVTKSLVESSNDTDLNNLGAGNGNDYLIGTYIEKDVVQSRWSNILSAERWPRM 334

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                     +  +      TW D         +     I     +  YP  +     + 
Sbjct: 335 TYTEAIGYLNKI-LPQDEKLTWGDSLQLKHERLLAEKSPI----FITDYPETQKPFYMLK 389

Query: 253 PAD-----PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
            A+     P       L     EL        D        +++    + I        E
Sbjct: 390 SANYNLEKPTVACFDLLVPEFGELAGGSMREHDYEVLLANMKQDNMNIEDI--------E 441

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +L           G  +GF+RL+  + G +N+ ++   P 
Sbjct: 442 WYLNLRKQGTIPHGGFGLGFERLITYLAGYDNVRDISAFPR 482


>gi|290559859|gb|EFD93182.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 427

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 104/332 (31%), Gaps = 37/332 (11%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
                ++ +  ++ ++F EN F +I S   +  +         F        +  K  +L
Sbjct: 124 ATFRVQSTVSGAITKFFEENNFYQIHSSKIISQATEG--GANVFQV-----LYFDKTAFL 176

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+F  + ++AAG E++F     +R        H  E+T ++   +  +  + +   M
Sbjct: 177 AQSPQFYKQMMMAAGFERVFEIGPVFRAEPHHTSRHLTEYTSVDMEMSFINSYEEIMSVM 236

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
             +  A                      E  +          + L   +    +      
Sbjct: 237 EQLMLAIYK-------------------EVKSKNAKDLEVHGVKLEDPVIPFPRITMKEA 277

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES-ALANIYPADP 256
               ++ G ++  D        RIL + ++   G +    L  +    +         D 
Sbjct: 278 AGILEKYGNKLKEDGDIDPEGERILGKYVKEKYGSD-FFFLTEFAWSIAQFYHMKKENDK 336

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM 316
             T R +L    +E+               + E+     K +  E +    DF      +
Sbjct: 337 SVTNRADLIYKGLEITTLAQREHRYSVLVSQLEE-----KGLDPEKFKFYTDFFR--YGV 389

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           P   G   G +R+V  +    N+ E    P +
Sbjct: 390 PPHGGSGTGLERIVKQMLNLENVAEATLLPRT 421


>gi|156843229|ref|XP_001644683.1| hypothetical protein Kpol_1056p26 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115331|gb|EDO16825.1| hypothetical protein Kpol_1056p26 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 483

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 103/360 (28%), Gaps = 30/360 (8%)

Query: 3   QIPSQPWWNRDFH----YRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +             + R       L  R+ ++ ++  +F  NQF +     L  S 
Sbjct: 127 PLQKKYHSLPYLRTLPTLKHRTSYLGSLLRFRSELEYNMATFFKLNQFTKASPPILTGSD 186

Query: 53  PGNETHIRAFSTELII-----QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
                 +  F  E        Q +  KP YL  S +    ++LA    + +  +  +R  
Sbjct: 187 CEGAGEL--FRVEANGYVEKKQHYFGKPTYLTVSLQLQL-EILAMAFSRAWSLSPCFRAE 243

Query: 108 EQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           E     H  EF M+E         +  K+    ++   +   ++ +   +          
Sbjct: 244 ESDTNRHLSEFWMMEAEWCFT---KDTKELTTFVKDMIQYITRESYKNFDDFIPKNIPEN 300

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
            +   E   R+  +    + +     +   +  +  +      +   W +         +
Sbjct: 301 CLPRNELLERWETLLRDESWNTITYTEAIEILQKRDKEVPFPNYRPIWGEALQSEHERWL 360

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             +        +  YP    A       D +    F+L    I          D  E   
Sbjct: 361 SESYFKGPT-FVTDYPRDCKAFYMKLNPDGQTVACFDLLVPGIGEIVGGSIREDNFELLS 419

Query: 287 RFEKEMQEKKKIYNETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +     Q  K        +D    L          G  +G +R V  + G +NI + I  
Sbjct: 420 KEVSRRQMNKNG-----ELDWYLSLRK-EGSVPHGGFGLGLERFVSYLYGNHNIRDAIPF 473


>gi|312385932|gb|EFR30320.1| hypothetical protein AND_00184 [Anopheles darlingi]
          Length = 436

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 105/356 (29%), Gaps = 43/356 (12%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI-RAFS 63
             H R R          R+  Q +  EY  +N FI+I +  L  +      E  + +  +
Sbjct: 94  HLHLRSRVSSMCSTFRVRHEAQRAFNEYLHQNGFIQIHTPVLTSNDCEGAGEAFLVKPLN 153

Query: 64  TELII----------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +L+             +  +P +L  S +    + ++ G +K++ F   +R       +
Sbjct: 154 DQLLKGMAKANVAMEHAYFDRPTFLTVSGQLHL-EAMSHGLDKVYTFGPTFRAENCKSNI 212

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF MLE   A     + + D +  +     V                        + 
Sbjct: 213 HLSEFYMLELEEAFMESVEELADRIEDMLKRVTVLMLDRSETDV-------RLVRKQTSS 265

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              R                D  +  L+A +  ++           ++     +  +   
Sbjct: 266 DDDRKDAFGWLEKPFPRLTYDEAIAVLRANKDKLKSPVQPEEG--INKEQELLLVEHY-- 321

Query: 233 NCCTILDRYPAPESALANIYPADPRF-TKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +  +P    +                +L   ++          D  E+  R    
Sbjct: 322 QGPLFVCYWPKEIKSFYMRENQQNGNLVDALDLLVPHVGELVGGSVREDSYERLQR---- 377

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +        + +D   L        ++G  +GF+R +  V   +NI +VI  P 
Sbjct: 378 --KLPNTDALRWYLD---LRKF-GSVTTAGFGLGFERYLSWVLNVHNIKDVIPFPR 427


>gi|294507857|ref|YP_003571915.1| Asparaginyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294344185|emb|CBH24963.1| Asparaginyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 520

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/396 (13%), Positives = 111/396 (28%), Gaps = 65/396 (16%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
            +  W R     +   +  RN I++++ E+F E  F++ D+  L  +    T     ST 
Sbjct: 137 HRHLWLRS--ESQWAVMRIRNRIETAIHEFFQERGFLQTDAPILTGNAVEGT-----STL 189

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
             +     +  YL  S +    + +A    K++ F   +R  +     H  EF M+E   
Sbjct: 190 FDLDYFDDESAYLTQSGQLH-GEAMAMAYGKVYTFGPTFRAEKSATRRHLTEFWMIEPEM 248

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFS-------FQNVNCNPFSEPEYITVAEAFARY 177
           A    E   +   + +    +   +             +      +    I+  EA    
Sbjct: 249 AFYDLEMNAQLAEDFVAHIVQAVLEDCEEELEALDRDTSALEQVETPFPRISYDEAVELL 308

Query: 178 ANIDLGTTLDNPDQPDRHLLYL-------------QAQQA-------------------- 204
            + +    +D   +                     QA++                     
Sbjct: 309 RSDETAEMIDERIEALNEEKAELLEEKEENQTRRGQAKKHVKRKIDAREIEINKRVDEIE 368

Query: 205 --------GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                       A    W + F       +      +   I+ R+PA   A       D 
Sbjct: 369 EALRNLPDWKESAQTFEWGEDFGGDDETVL--TWHFDRPVIVHRFPAEIKAFYMKRDPDD 426

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
                                     +     ++++   +         D  +L      
Sbjct: 427 DRLAMGIDVLAPEGYGEIIGGGERATD-LDFLKEQI---EAHDLPEDVFDW-YLDLRKFG 481

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
               SG  +G +R V  +TG +++ E I  P + + 
Sbjct: 482 SVPHSGFGLGLERTVSWITGRDHVRETIPFPRTIAR 517


>gi|28975406|gb|AAO61799.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus]
          Length = 76

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            D  +Q  RF+ +++ K+   +E    D D++  L   +P ++G  +G DRLVML+T  +
Sbjct: 2   NDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTH 61

Query: 338 NINEVIWTPFSQSN 351
            I +VI  P  +  
Sbjct: 62  TIRDVILFPAMRPQ 75


>gi|315187301|gb|EFU21057.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 424

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 105/333 (31%), Gaps = 37/333 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R     +  +     +Y     F EI +  L  + G E       T L   ++  + +YL
Sbjct: 122 RTIFTLQAGLVQYFADYLRSQGFSEIKTSKLIAT-GTEGG-----TGLFEVNYFDRKVYL 175

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+F  + ++A+G E++F    A+R  +     H  E+  L+   A    E  + D  
Sbjct: 176 AQSPQFYKQAMVASGMERVFEIGMAYRAEKHDTPRHLNEYVSLDVEMAFIETEHDLMDLE 235

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
             I        +          +                    D     D P        
Sbjct: 236 EGILAYMFEKVKSEHEEVLRLWDATVP----------------DPERVKDIPRISYDEGK 279

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
            + +++AG ++   +  +    R+L E      GI     +  +P          P    
Sbjct: 280 KIASERAGRKIFEINPEA---ERLLCEWAHEKAGIE-AVFVYGFPRRARPFYTY-PEGRS 334

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
            T+ F+L    +E+      + +    +         ++ +          ++       
Sbjct: 335 STRSFDLLFRGLEITTGGRRIHEYSMLKETLPLFGLTEEGLGG--------YVEIFKYGC 386

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           P   G A+G +RL   + G  N+ E    P  +
Sbjct: 387 PPHGGFAIGLERLTQKILGLQNVREASLFPRDR 419


>gi|209554140|ref|YP_002284767.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|226695839|sp|B5ZBH7|SYN_UREU1 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|209541641|gb|ACI59870.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
          Length = 454

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 110/342 (32%), Gaps = 25/342 (7%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R R       +  R  +  ++ E+  +N++  + +     +            +   
Sbjct: 123 AHLRPRTNLFHAIMKVRATLAFAVHEFMNQNEYSWLAAPLFTGNDAEGAGETFSIQKFDN 182

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHE 127
           ++   K  +L  + +   +    A    ++ F   +R  +     H  EF M+E   A  
Sbjct: 183 EEFFGKQTHLSVTGQLQAEAYAQA-FGNVYTFGPTFRAEKSHTNRHLAEFWMIEPEMAFV 241

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
             + +     N+I+   +   +K             E       E   +     + +  +
Sbjct: 242 DLKGMQDIVENLIKHVIKAVLEKN--------QQELEFLAQRNDENLIKKLQKVVDSKFE 293

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
             +  D   +   A ++G +   ++  +           +          +   YP    
Sbjct: 294 RIEYKDAVKILANAVKSGHQFEDNEIFFGMDLGSEHERYMCETYHQGPVFLQ-NYPKDIK 352

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           A       D +     +L    +       +  D  E     ++  + K  I +  + +D
Sbjct: 353 AFYMKLNDDQQTVASTDLLIPGVGELVGGSQREDNYE--KLLKRCQELKMPIESLQWYLD 410

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              L      M  SSG  +GF+RLVM VTG NNI + I  P 
Sbjct: 411 ---LRRFGYYM--SSGFGIGFERLVMYVTGVNNIKDTIPFPR 447


>gi|313232355|emb|CBY09464.1| unnamed protein product [Oikopleura dioica]
          Length = 554

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 110/354 (31%), Gaps = 54/354 (15%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETH 58
           + D  +  R            L  R+ +  + RE++    + E+    L  +   G  T 
Sbjct: 231 DPDTLFDNRHLVIRGEKTSKILKIRSHLMQAFREHYFARGYHEVTPPCLVQTMCEGGST- 289

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   D+  +  YL  S +   +  + A    +FC A ++R  +     H  E+
Sbjct: 290 -------LFKFDYFGEEAYLTQSSQLYLETCMPA-LGDVFCMAESYRAEKSRTRRHLSEY 341

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++EQL+    +++    +   +        + +P   P            
Sbjct: 342 THVEAECPFITFEQLLDRIEDLLVDVIDRLLKSPAGQYVYDLHPNFVPPKKPFMRM---- 397

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCC 235
                          D        ++  I+      +   D        K+   +G    
Sbjct: 398 ---------------DYKDAITYLKEHDIKKDDGSYYEFGDDIPEAPERKMTDQIG--QV 440

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            +L R+PA   S        D R T+  + L     E+      + D      ++++   
Sbjct: 441 IMLHRFPAEIKSFYMPRCEDDERVTESVDVLIPNVGEVIGGSMRMWDYDTLMSKYKE--- 497

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + I  + Y    D            G  +G +R++  +    +I +V   P 
Sbjct: 498 --EGIDPKDYYWYTD--QRKYGSCPHGGYGLGLERMLTWLCDQYHIRDVCLYPR 547


>gi|213512082|ref|NP_001133698.1| syncoilin, intermediate filament protein [Salmo salar]
 gi|209154978|gb|ACI33721.1| Asparaginyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 559

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 106/334 (31%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+ +    R++F    + EI   +L      G  T        L   ++  +  +L
Sbjct: 256 ILRIRSTVTQCFRDHFFNRGYYEITPPTLVQTQVEGGST--------LFNLNYFGEEAFL 307

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A     FC A ++R  +     H  E+T +E      +YE L+    
Sbjct: 308 TQSSQLYLETCIPA-LGDTFCIAQSYRAEQSRTRRHLSEYTHIEAECPFMTYEDLLSRLE 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +      NP  +P          R    D    L   D       
Sbjct: 367 DLVCDVVDRVLKSPAASLLYQVNPDFKPPKRPF----KRINYSDAIIWLKEHD------- 415

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               +  G      +   +   R++ + I   +      +L R+PA   S      P D 
Sbjct: 416 --IKKDDGTYYEFGEDIPEAPERLMTDAIGETI------LLCRFPAEIKSFYMQRCPEDR 467

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+         +   +     E     K++  +        D+      
Sbjct: 468 RLTESVDVLMPNVGEIVGGSMRI--WDAEELLEGY---KREGIDPAPYYWYTDQR----K 518

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +   ++I +V   P 
Sbjct: 519 YGTCPHGGYGLGLERFLTWLLNRHHIRDVCLYPR 552


>gi|170290813|ref|YP_001737629.1| aspartyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174893|gb|ACB07946.1| aspartyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 419

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 105/336 (31%), Gaps = 35/336 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
                +      + +   + ++   N FI + + +L  +  +E+    F        +  
Sbjct: 112 RRPEIQAIFKIESSLLDGMEDWLRRNGFIRVFTPALIGAA-SESGAEVFKV-----LYFD 165

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTMLEWYRAHESYEQL 132
           K  YL+  P+   +  +  G E+I+     WR    +   H  EF  L    A    EQ 
Sbjct: 166 KEAYLRQDPQLHRQLTILGGFERIYDLGTNWRAELSRTPRHLSEFRSLAVELAFIENEQD 225

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                  I                           +          N+DL        + 
Sbjct: 226 TMRVEEQIIREGIK-------------------RVVEERSKELELLNVDLDVPKVPFPEL 266

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
               +Y   ++ G  + + + +     R+L + +  N   +    ++R+P        + 
Sbjct: 267 RFPKIYEILEEYGKIIEYGEDYDTESERLLWQYVRENYESD-FFFVNRFPFKVKPFYVMK 325

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             D  + +  +L    +EL +                 +++EK  +   +      F A 
Sbjct: 326 EDD-TWARSVDLLYKGLELSSGGQREHRYDV----LISQIREK-GLDPRSLEWFTKFFA- 378

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               P   G A+G +RL+M +   +++ E    P  
Sbjct: 379 -YGAPPHGGFAIGIERLLMKMLELSSVKEASLFPRD 413


>gi|242006633|ref|XP_002424153.1| asparaginyl-tRNA synthetase, cytoplasmic, putative [Pediculus
           humanus corporis]
 gi|212507478|gb|EEB11415.1| asparaginyl-tRNA synthetase, cytoplasmic, putative [Pediculus
           humanus corporis]
          Length = 552

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 102/335 (30%), Gaps = 46/335 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+++  + R+++ E  + E+   +L      G  T        L   ++  +  YL
Sbjct: 249 VLKMRSVVMQAFRDHYAERGYYEVTPPTLVQTQVEGGST--------LFKLNYFGEEAYL 300

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E       YE+ +    
Sbjct: 301 TQSSQLYLETCL-ASMGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFIDYEEFLNRVE 359

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +          NP  +P                           D    
Sbjct: 360 DLLTDVVDKVLKSSHGHLVYELNPDFKPPKKPFKRM-------------------DYADA 400

Query: 198 YLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPA 254
               ++  I       +   +    +   K+     IN   +L R+P    S        
Sbjct: 401 IKYLKENNITKEDGSFYEFGEDIPEMPERKMTDQ--INEPIMLCRFPVNIKSFYMARCAE 458

Query: 255 DPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           D   T+  ++    + E+        D  E    F      +  I  E Y     ++   
Sbjct: 459 DSNLTESVDVLLPGVGEIIGGSMRSWDEKELIDGFV-----RNNINPEPYY---WYIDQR 510

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                   G  +G +R +  +    +I EV   P 
Sbjct: 511 KYGSCPHGGYGLGLERFMCWLLNRYHIREVCLYPR 545


>gi|171920875|ref|ZP_02932036.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185178894|ref|ZP_02964665.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024292|ref|ZP_02996982.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518581|ref|ZP_03004036.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524536|ref|ZP_03004527.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198273637|ref|ZP_03206172.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|225550941|ref|ZP_03771890.1| asparagine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551449|ref|ZP_03772395.1| asparagine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903086|gb|EDT49375.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209152|gb|EDU06195.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018966|gb|EDU57006.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997791|gb|EDU66888.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659639|gb|EDX53019.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198249665|gb|EDY74446.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|225379264|gb|EEH01629.1| asparagine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225380095|gb|EEH02457.1| asparagine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 454

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 110/342 (32%), Gaps = 25/342 (7%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R R       +  R  +  ++ E+  +N++  + +     +            +   
Sbjct: 123 AHLRPRTNLFHAIMKVRATLAFAVHEFMNQNEYSWLAAPLFTGNDAEGAGETFSIQKFDN 182

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHE 127
           ++   K  +L  + +   +    A    ++ F   +R  +     H  EF M+E   A  
Sbjct: 183 EEFFGKQTHLSVTGQLQAEAYAQA-FGNVYTFGPTFRAEKSHTNRHLAEFWMIEPEMAFV 241

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
             + +     N+I+   +   +K             E       E   +     + +  +
Sbjct: 242 DLKGMQDIVENLIKHVIKAVLEKN--------QQELEFLAQRNDENLIKKLQKVVDSKFE 293

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
             +  D   +   A ++G +   ++  +           +          +   YP    
Sbjct: 294 RIEYKDAVKILADAVKSGHQFEDNEIFFGMDLGSEHERYMCETYHQGPVFLQ-NYPKDIK 352

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           A       D +     +L    +       +  D  E     ++  + K  I +  + +D
Sbjct: 353 AFYMKLNDDQQTVASTDLLIPGVGELVGGSQREDNYE--KLLKRCQELKMPIESLQWYLD 410

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              L      M  SSG  +GF+RLVM VTG NNI + I  P 
Sbjct: 411 ---LRRFGYYM--SSGFGIGFERLVMYVTGVNNIKDTIPFPR 447


>gi|94984903|ref|YP_604267.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555184|gb|ABF45098.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 439

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 100/351 (28%), Gaps = 53/351 (15%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              + R  L  +  + ++ R++     F EI +  +  +      ++          D+ 
Sbjct: 126 RGLKERAVLKVQAELVAAFRDHLTSEGFTEISTPKIVSAGAEGGANLFPI-------DYF 178

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
             P YL  SP+   K+++    E++F  A  +R  E     H  E+  L+        E+
Sbjct: 179 GHPAYLAQSPQLY-KQIMVGVFERVFEVAPVYRAEEHATSRHLNEYLSLDVEMGFIESEE 237

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            + D    +  A     Q+    +                E  AR   I           
Sbjct: 238 DVMDLETRVLAAMMTRLQERVQPELTLLGATLP-------EVPARIPRI----------- 279

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC---CTILDRYPAPESAL 248
                  L+A+Q                      +  +           + +YP      
Sbjct: 280 -----TLLEARQLVTERYGHVVGGKDLDPEAERLLSQHYAQEEGTEFVFVTKYPRAARPF 334

Query: 249 ANIYPAD------PRFTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKKIYN 300
                 +      P  T+ F+L    IE+ +    + +         +     E    Y 
Sbjct: 335 YTHAEINSDGSLNPDITRGFDLLFRGIEITSGGQRIHEYSMLLDSIAQYRLNPESLAGYT 394

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           E +            MP   G A+G +RL   + G  N+      P  +  
Sbjct: 395 EVFK---------YGMPPHGGFAIGAERLTAKLLGIANVRYARAFPRDRHR 436


>gi|31127138|gb|AAH52849.1| Asparaginyl-tRNA synthetase [Mus musculus]
          Length = 548

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 106/334 (31%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+MI    R++F +  + E+ + +L      G  T        L   D+  +  +L
Sbjct: 245 ILKARSMITRCFRDHFFDRGYCEVTTPTLVQTQVEGGAT--------LFKLDYFGEEAFL 296

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  EFT +E      ++E L+    
Sbjct: 297 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLE 355

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +      NP  +P                        D  +    
Sbjct: 356 DLVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMN-------------YSDAIEWLKE 402

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      D   +   R++         IN   +L R+P    S      P DP
Sbjct: 403 HDVKKEDGTFYEFGDDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 456

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+             +     E     K++  +        D+      
Sbjct: 457 RLTESVDVLMPNVGEIVGGSMR--SWDSEEILEGY---KREGIDPAPYYWYTDQR----K 507

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                     +G +R +  +    +I +V   P 
Sbjct: 508 YGTCPHGEYGLGLERFLSWILNRYHIRDVCLYPR 541


>gi|242785470|ref|XP_002480601.1| aspartyl-tRNA synthetase Dps1, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218720748|gb|EED20167.1| aspartyl-tRNA synthetase Dps1, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 554

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 83/279 (29%), Gaps = 18/279 (6%)

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
           ++  YL  SP+   +  +A   E +F     +R        H  EFT L++ +    +  
Sbjct: 285 KEEGYLAQSPQLMKQMAIAGDMESVFEVGPVFRAENSNTHRHLTEFTGLDFEKTFRHHYH 344

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            + D    +        ++ +  +                    +   ++    +    +
Sbjct: 345 EVLDFAEELLVFILTELKERYKDEIAVIQKSYPKAGDFRLPKDGKALRLNYMDGVALLKE 404

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                   +A +     A +     I                   +LDR+P         
Sbjct: 405 AGVDTSEQEAFENDFTTAMEKKLGQIIREKYD---------TDFYVLDRFPMAVRPFYTK 455

Query: 252 -YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             P DP F+  ++ +    E+ +    + D  E            KK  +      ED+L
Sbjct: 456 ADPNDPTFSHSYDFFMRGEEIMSGAQRINDVKELEE------SMIKKGVDPKSEGFEDYL 509

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  P  +G  +G +R+VM   G  N+      P  
Sbjct: 510 NAFRQGCPPHAGGGLGLNRIVMFFLGLPNVRLATLFPRD 548


>gi|71021047|ref|XP_760754.1| hypothetical protein UM04607.1 [Ustilago maydis 521]
 gi|46100184|gb|EAK85417.1| hypothetical protein UM04607.1 [Ustilago maydis 521]
          Length = 1047

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 97/351 (27%), Gaps = 30/351 (8%)

Query: 10   WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH-----IRA 61
                   R       R+ ++ ++ E+   + F+++    L  S      E         A
Sbjct: 711  HLLGRLPRYAAVARTRSRLEHAMGEFLASHDFVKVACPVLTSSDCEGAGEVFQVVADSDA 770

Query: 62   FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
             S             YL  S +   +        +++    A+R        H  EF ML
Sbjct: 771  RSKHDPAAFWSGSHAYLSVSSQLHLEAAGLG-LGRVWTCNPAFRAEGSATNRHLAEFWML 829

Query: 121  EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
            E          ++     +I+     A                + E +      +  A++
Sbjct: 830  EAEMYFTDLAGILHVTEQMIKAGITAA-----------LAGTQDMELLADEAHLSMLASV 878

Query: 181  DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                        + H L   A       A         +      +  + G      +  
Sbjct: 879  ATAQAWKRITYHEAHQLLSHAPAGTFECAPHVDSG--LASEHERYLAAHFG---PVFVTH 933

Query: 241  YPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKI 298
            YP  + +     Y + P   + F+L   ++ EL                  +        
Sbjct: 934  YPLSQKAFYMKRYSSCPTLVECFDLLIPSLGELVGGSVREHRRSSLTENLAELACGVAMS 993

Query: 299  YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                + +D+  L         +G  MG +RL+  VT   ++ +V+  P  +
Sbjct: 994  DKLAWYLDD--LKKFGGALDHAGFGMGIERLLAWVTNTTSVKDVVPFPRVK 1042


>gi|297519739|ref|ZP_06938125.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 173

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 17/115 (14%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I S +R++ V   F+E+++ 
Sbjct: 63  LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETP 122

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
            +Q  PG     R F T     + +   +YL+ +PE   K+L+  G E++F    
Sbjct: 123 MMQVIPGGAA-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINR 173


>gi|302851344|ref|XP_002957196.1| hypothetical protein VOLCADRAFT_77490 [Volvox carteri f.
           nagariensis]
 gi|300257446|gb|EFJ41694.1| hypothetical protein VOLCADRAFT_77490 [Volvox carteri f.
           nagariensis]
          Length = 483

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 79/287 (27%), Gaps = 20/287 (6%)

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T     D   KP YL  S +   +    A    I+ F   +R        H  EF M+E 
Sbjct: 207 TPDYKDDFFSKPAYLTVSGQLQGEFYACA-LSNIYTFGPTFRAEYSFTARHLAEFWMIEP 265

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    +  M+   + +R   +       +              +    A AR   +  
Sbjct: 266 EMAFCDLKDDMQCAEDYVRYCCKYLLDNCQTDLEF-------INKMVDNTAIARLQQVAH 318

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                        LL     +   +  ++  W           +   +      I+  YP
Sbjct: 319 TPFKRVSYTEAIDLLKDVVARGVKKFEYNVEWGIDLQTEHERYLTEEIFKQPV-IVYNYP 377

Query: 243 APESALANIYPAD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
               A       D         L     EL               R E+         + 
Sbjct: 378 KEIKAFYMRLNEDGKTVAAMDVLVPKVGELIGGSQREDRLDVLEKRIEE------GGMDI 431

Query: 302 TYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                E +L          SG  +GF+RL++  TG +NI EVI  P 
Sbjct: 432 AAY--EGYLDLRRYGTVPHSGFGLGFERLILFATGLDNIREVIPFPR 476


>gi|293977881|ref|YP_003543311.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
 gi|292667812|gb|ADE35447.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri DMIN]
          Length = 453

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 111/360 (30%), Gaps = 35/360 (9%)

Query: 1   MHQIPSQPWWNRD-FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPG 54
           +          R+  + R R       +  R+ I  S+ ++F + +F  I++  +  +  
Sbjct: 109 LQPKEHSFKKLREQAYLRFRTTIFSSIMRIRHNISFSIHKFFYKKKFYYINTPIIT-TYD 167

Query: 55  NETHIRAFSTELIIQD----HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
            E     F      ++          YL  S +    +  A+G  KI+ F   +R  +  
Sbjct: 168 TEGAGDMFRVTNFKKNNNLDFFGAYTYLTVSGQL-QGEAAASGLGKIYTFGPTFRAEKSN 226

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   +      +M      ++   +   +  +          +  + + 
Sbjct: 227 TFRHLSEFWMIEPEISFYELNNIMSLAEEFLKFIIKYVIKHCYEDLYFLEKKKNIFKIL- 285

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
                  Y+ +D      +     + L +       ++  +   W         + +  +
Sbjct: 286 -------YSILDFPFEKISYTNAIKILKF----SKNVKFIYPVIWGADLQSEHEKFLSEH 334

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRF 288
              N   I+  YP            D +     ++    I E+               R 
Sbjct: 335 YFNNRPIIIFNYPLKIKPFYMRLNNDNKTVAAMDIIFPYIGEIIGGSQREERYNVLLKRM 394

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +   + K +          +L          SG  +GF+RL+  +T  +NI +VI  P 
Sbjct: 395 IESNLDTKSL--------WWYLNIRRFGSVPHSGFGLGFERLIQFITNISNIKDVIPFPR 446


>gi|71653289|ref|XP_815284.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70880329|gb|EAN93433.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 534

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/379 (12%), Positives = 100/379 (26%), Gaps = 66/379 (17%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
            L   + +    R+  +  +F+EI +   L  +    +        +   D+  +  YL 
Sbjct: 165 VLRLVSAVCQCFRKQLLAREFVEIHTPKMLAAASEGGSA-------VFTIDYFGQRGYLA 217

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            SP+   + +L     ++F     +R  +     H  EF  L+     E     + D + 
Sbjct: 218 QSPQLYKQMVLMGDAMRVFEIGPVFRAEKSLTHRHLTEFVGLDAEFVIEHSYTEVLDVLE 277

Query: 139 IIRCAAEVANQKIFS--------------------------------------------- 153
              CA     Q+  +                                             
Sbjct: 278 STVCAMIDHLQEDHAALVRQARESLADMDAAEGSPSALGRNQEKEEASIVCELSEETLGA 337

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANID---LGTTLDNPDQPDRHLLYLQAQQAGIRVAH 210
           F  +  +                  +ID            +              +    
Sbjct: 338 FGCLTTDATEAHLTTDCYHGRVGVGSIDAQRRNPRQPKVLRLTFDDAVRLLLDHHVVDQP 397

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
              ++    R + E +    G++   I              +P     T  F++Y    E
Sbjct: 398 PTDFTLPQERRIGELVRERYGVDVYIIDQFPLTARPFYTLPHPHKTESTCSFDMYLRGEE 457

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +C+    + D        E+   +   +          ++           G  +G +R+
Sbjct: 458 ICSGSQRIHDITLLLQNMERLQVDAASLKE--------YVDAFRYGAWPHGGFGLGLERI 509

Query: 330 VMLVTGANNINEVIWTPFS 348
           V+ + GA +I ++   P  
Sbjct: 510 VLFLLGAKDIRQISLFPRD 528


>gi|330790777|ref|XP_003283472.1| hypothetical protein DICPUDRAFT_44848 [Dictyostelium purpureum]
 gi|325086582|gb|EGC39969.1| hypothetical protein DICPUDRAFT_44848 [Dictyostelium purpureum]
          Length = 649

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 117/354 (33%), Gaps = 45/354 (12%)

Query: 2   HQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIR 60
            Q+  +    R         +  R++   + RE+F  N + E++  +L  +     + + 
Sbjct: 326 QQLDQRHILLRGTRASS--IMKIRSIALQAFREHFYHNGYFEMNPPTLVNTFCEGGSEL- 382

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTM 119
                    D+   P YL  S +    + +      +FC A ++R+ + +   H  EFT 
Sbjct: 383 ------FTLDYFGTPAYLTQSSQLYL-ETMCPVVGDVFCIAQSYRSEKARTRRHLSEFTH 435

Query: 120 LEWYRAHESY----EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           LE      ++    +++     +++    ++    + S +     P      +   EA  
Sbjct: 436 LEAEMPFITFEDLTDRIEFLICDVVERMLKIDGDLVRSIKEDVAVPKRPFMRMDYKEAIE 495

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
                 +    ++  + D                      D        K+   +G  C 
Sbjct: 496 YCVKNGIKKVNEDGTESDFQF------------------GDDIPEAQERKMNDQIG--CP 535

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
             L R+P    +      P D   T+  +L    + E+      + D  E  +       
Sbjct: 536 IFLRRFPHAMKAFYMKRCPEDKELTESLDLLMPGVGEIVGGSMRISDYDELLN-----AY 590

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +++++  E Y    D         Q+ G  +G +R +  + G  +I +V   P 
Sbjct: 591 KREELDAEQYYWFTD--QRKYGSGQTGGYGLGVERFLTWILGLPHIRDVCSYPR 642


>gi|317123807|ref|YP_004097919.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315587895|gb|ADU47192.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 451

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 95/338 (28%), Gaps = 31/338 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R R      +      R       F EI +  L  +   E+    F       D+  
Sbjct: 136 RHPRHRAAWEVASASMRGFRSALTGLDFTEIATPKLVGTA-TESGANVFEV-----DYFG 189

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHE-SYEQ 131
           +P YL  SP+   +  L    E++F     +R        H  ++T L+        +  
Sbjct: 190 RPAYLAQSPQLYKQM-LVGVFERVFEVGPVFRAEPHDTVRHLAQYTSLDAELGFIRDHRD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      +    E          ++              +  A+   I     L     
Sbjct: 249 VLAVLRAALAGMVEAVGTYAAEAASLLSLHLP--------QVPAKLPVIHFRDALALVGA 300

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                    A +  +           F  +    +             R     +  A  
Sbjct: 301 DPAEPDLSPAHERALSAWACTVHDSEFLAVEGFPMAKRPFYTAPEGYGR-----AGGAGS 355

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
            PA  + +  F++    +EL      L  P + R   E      +   +        +LA
Sbjct: 356 EPAPGQASNSFDVLFRGLELTTGGQRLHRPSDYRAALE------RAGQDPAPL--AGYLA 407

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                MP   G A+G +R V  + GA N+ EV   P  
Sbjct: 408 AFDHGMPPHGGFAIGLERWVARLNGAENVREVALFPRD 445


>gi|219129606|ref|XP_002184975.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403470|gb|EEC43422.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 460

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 107/345 (31%), Gaps = 38/345 (11%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
              W           +  ++ +            F EI +  L  +  +E+    F+T  
Sbjct: 145 DHRWMDLRAPANNAIMRIQSAVCQLF-------GFCEIHTPKLI-AGESESGAGVFTT-- 194

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
              D+      L  SP+   +  +A+   ++F     +R        H  EFT L+   A
Sbjct: 195 ---DYFGTTACLAQSPQLYKQMAIASDLPRVFEIGPVFRAENSNTRRHLCEFTGLDLEMA 251

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            + +     + ++ +        +  ++ +        + E +                 
Sbjct: 252 IDDHYLETLEVVHELFKHIFTGLESRWAKELNIIREQYDSEPV---------------AF 296

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
             +P            Q  G  +A      +    + + ++          +LD+YP+  
Sbjct: 297 TPDPCVLHWPEALEILQNEGFDIADGMQDMNGAMELALGRVVKEKYGTDFFMLDKYPSSI 356

Query: 246 SALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                   P D R++  ++++    E+C+      DP         + +  +        
Sbjct: 357 RPFYTMPDPEDSRYSNSYDIFIRGQEICSGAQRCHDPDLVEKIL--QEKGIEVGDGL--- 411

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + ++      +   +G  +G +R+V L  G +N+ +    P  
Sbjct: 412 --KSYIESFRHGVSPHAGAGIGLERVVFLYLGLDNVRKASMFPRD 454


>gi|22096193|sp|Q8U4D3|SYN_PYRFU RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
          Length = 434

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/352 (16%), Positives = 106/352 (30%), Gaps = 49/352 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           +  +    R    +    +  +  +  + RE+ +++ + E+    L      G  T    
Sbjct: 119 LDYRHLHIRT--PKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVEGGAT---- 172

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L    +  K  YL  S +   +  +    EK++    ++R  +     H  EF  L
Sbjct: 173 ----LFKLKYFDKYAYLSQSAQLYLEAAIFG-LEKVWSLTPSFRAEKSRTRRHLTEFWHL 227

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A      +MK    ++    +   +       +                       
Sbjct: 228 ELEAAWMDLWDIMKVEEELVSYMVQRTLELRKKEIEMFR--------------------- 266

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D  TTL N + P   + Y +A         +  W D         +      +    +  
Sbjct: 267 DDLTTLKNTEPPFPRISYDEAIDILQSKGINVQWGDDLGADEERVLTEE--FDRPFFVYG 324

Query: 241 YPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YP    +      P DPR     +     +       E++    QR   +   +   +I 
Sbjct: 325 YPKQIKAFYMKEDPNDPRKVLAAD-----MLAPEGYGEIIGGS-QRE--DDYEKLLNRIL 376

Query: 300 NETY-PID-EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E   P D E +L          SG  +G +RLV  V   ++I      P +
Sbjct: 377 EEGMDPKDYEWYLDLRKYGSVPHSGFGLGVERLVAWVLKLDHIRWASLFPRT 428


>gi|322830587|gb|EFZ33557.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 495

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/379 (11%), Positives = 100/379 (26%), Gaps = 66/379 (17%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
            L   + +    R+  +   F+EI +   L  +    +        +   D+  +  YL 
Sbjct: 126 VLRLVSAVCQCFRKQLLARDFVEIHTPKMLGAASEGGSA-------VFTIDYFGQRGYLA 178

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY--------------- 123
            SP+   + +L     ++F     +R  +     H  EF  L+                 
Sbjct: 179 QSPQLYKQMVLMGDAMRVFEIGPVFRAEKSLTHRHLTEFVGLDAEFVIEHSYTEVLDVLE 238

Query: 124 ---RAHESYEQLMK---------------------------DCMNIIRCAAEVANQKIFS 153
               A   + Q                                        E++ +   +
Sbjct: 239 STVCAMIDHLQEDHAALVRQARESLADMDAAEGSPSALGRNQEKEEASIVCELSEETFGA 298

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANID---LGTTLDNPDQPDRHLLYLQAQQAGIRVAH 210
           F  +  +                  +ID            +              +    
Sbjct: 299 FGCLTTDATEAHLTTDCYHGRVGVGSIDAQRRNPRQPKVLRLTFDDAVRLLLDHHVVDQP 358

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
              ++    R + E +    G++   I              +P     T  F++Y    E
Sbjct: 359 PTDFTLPQERRIGELVRERYGVDVYIIDQFPLTARPFYTLPHPHKTESTCSFDMYLRGEE 418

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +C+    + D        E+   +   +        +D++           G  +G +R+
Sbjct: 419 ICSGAQRIHDITLLLQNMERLQVDVASL--------KDYVDAFRYGAWPHGGFGLGLERI 470

Query: 330 VMLVTGANNINEVIWTPFS 348
           V+ + GA +I ++   P  
Sbjct: 471 VLFLLGAKDIRQISLFPRD 489


>gi|328768004|gb|EGF78052.1| hypothetical protein BATDEDRAFT_91161 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 503

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/385 (13%), Positives = 105/385 (27%), Gaps = 54/385 (14%)

Query: 4   IPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGN 55
           +P +       H R R  +       R+     + ++F   +F +++   L       G 
Sbjct: 125 LPLEHLREYQ-HLRSRTRIFGALWRIRSAALQGIHDFFKAQEFTQVNMPILTTHDCEGGG 183

Query: 56  ETH---------------IRAFSTE-----LIIQDHIRKPLYLQTSPEFSCKKLLAAGEE 95
           E                 +    T       +  +   KP+Y   S +    + +A+   
Sbjct: 184 EAFRVLTDDTLKSYQNYAVNYSQTTQHQALPLPDEFFGKPVYTTVSAQLHL-EFMASALS 242

Query: 96  KIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
           +++    A+R  +     H  EF MLE           +    ++I    +   Q + + 
Sbjct: 243 RVYVLGPAFRAEKSQSTRHLAEFWMLEAEACFI---PTISALTDLIEGNIKHVIQHVLNT 299

Query: 155 QNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
              +   F +     + +     +N   +  T  D           +  ++         
Sbjct: 300 CQEDLALFDQFSERDLVQKLDNVSNKLFERMTYTDAVQVLLNAEKGINGKRCAPEWQFPV 359

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY---------PADPRFTKRFE 263
            W         + +   + I     +  YP                     D       +
Sbjct: 360 KWGLPLQSEHEKFLAETI-IKGPVFVTDYPKKIKPFYMKQSGIGNTSVTKCDGETVACTD 418

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
           L    +          D  E         +      +      E +L           G 
Sbjct: 419 LLLPKVGELAGGSLREDQYELLA-----QKINDAGLDSAQL--EWYLDLRKYGSVPHGGY 471

Query: 323 AMGFDRLVMLVTGANNINEVIWTPF 347
            MGF+RL+  +TG  NI ++I  P 
Sbjct: 472 GMGFERLLGYLTGMTNIRDMIPAPR 496


>gi|207108159|ref|ZP_03242321.1| lysyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 82

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
           +Q  RF+ ++ EK+K   E   +DED++  L   MP ++G  +G DRLVML+TGA +I +
Sbjct: 3   DQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKD 62

Query: 342 VIWTPFSQSNQEE 354
           VI  P  +  + +
Sbjct: 63  VILFPAMRPVKND 75


>gi|307719886|ref|YP_003875418.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306533611|gb|ADN03145.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 424

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 105/333 (31%), Gaps = 37/333 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R     +  +     +Y     F EI +  L  + G E       T L   ++  + +YL
Sbjct: 122 RSIFTLQAGLVQYFADYLRSQGFSEIKTSKLIAT-GTEGG-----TGLFEVNYFDRKVYL 175

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+F  + ++A+G E++F    A+R  +     H  E+  L+   A    E  + D  
Sbjct: 176 AQSPQFYKQAMVASGMERVFEIGMAYRAEKHDTPRHLNEYVSLDVEMAFIETEHDLMDLE 235

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
             I        +          +                    D     D P        
Sbjct: 236 EGILAYMFEKVKSEHEEVLRLWDATVP----------------DPERVKDIPRISYDEGK 279

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
            + +++AG ++   +  +    R+L E      GI     +  +P          P    
Sbjct: 280 KIASERAGRKIFEINPEA---ERLLCEWAHEKAGIE-AVFVYGFPRRARPFYTY-PEGRS 334

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
            TK F+L    +E+      + +    +         ++ +          ++       
Sbjct: 335 STKSFDLLFRGLEITTGGRRINEYSMLKETLPLFGLTEEGLGG--------YVEIFKYGC 386

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           P   G A+G +RL   + G  N+ E    P  +
Sbjct: 387 PPHGGFAIGLERLTQKILGLQNVREASLFPRDR 419


>gi|308810651|ref|XP_003082634.1| SYNO_ARATH Asparaginyl-tRNA synthetase, chloroplast/mitochondrial
           precursor (ISS) [Ostreococcus tauri]
 gi|116061103|emb|CAL56491.1| SYNO_ARATH Asparaginyl-tRNA synthetase, chloroplast/mitochondrial
           precursor (ISS) [Ostreococcus tauri]
          Length = 557

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 74/281 (26%), Gaps = 22/281 (7%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHES 128
           D   K  YL  S +    +++A     ++ F   +R        H  EF M+E   A   
Sbjct: 289 DFFGKRSYLTVSGQL-NGEIMACAVNDVYTFGPTFRAENSNTSRHLAEFWMVEPELAFAD 347

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            +  M      ++       +                  I+      R  N+     +  
Sbjct: 348 LKDDMDCAEAYLKYCLNHVLEHCDEDLAFFEAN------ISKDNLRERLRNVASQEFVRI 401

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                   +    ++          W           I   +  +   I+  YP    A 
Sbjct: 402 TYTEAVEHIQKATKKFEFPCE----WGSDLQSEHERYISEEVFKDRPVIVRDYPKDIKAF 457

Query: 249 ANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                  +        L     EL               R E+   EK+           
Sbjct: 458 YMRLNDDNKTVAAMDVLVPRVGELMGGSQREERLDVLERRIEENGLEKEAY--------W 509

Query: 308 DFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +L          +G  +GF+RLV  VTG  NI + I  P 
Sbjct: 510 WYLDLRRYGSQPHAGFGLGFERLVQYVTGVENIRDAIPFPR 550


>gi|83815569|ref|YP_445945.1| asparaginyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83756963|gb|ABC45076.1| asparaginyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 544

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/394 (13%), Positives = 111/394 (28%), Gaps = 61/394 (15%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
            +  W R     +   +  RN I++++ E+F E  F++ D+  L  +    T     ST 
Sbjct: 161 HRHLWLRS--ESQWAVMRIRNRIETAIHEFFQERGFLQTDAPILTGNAVEGT-----STL 213

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
             +     +  YL  S +    + +A    K++ F   +R  +     H  EF M+E   
Sbjct: 214 FDLDYFDDESAYLTQSGQLH-GEAMAMAYGKVYTFGPTFRAEKSATRRHLTEFWMIEPEM 272

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFS-------FQNVNCNPFSEPEYITVAEAFARY 177
           A    E   +   + +    +   +             +      +    I+  EA    
Sbjct: 273 AFYDLEMNAQLAEDFVAHIVQAVLEDCEEELEALDRDTSALEQVETPFPRISYDEAVELL 332

Query: 178 ANIDLGTTLDNPDQPDRHLLYL-------------QAQQA------GIRVAHDDTWSDIF 218
            + +    +D   +                     QA++          +  +    +I 
Sbjct: 333 RSDETAEMIDERIEALNEEKAELLEEKEENQTRRGQAKKHVKRKIDAREIEINKRVDEIE 392

Query: 219 SRILIEKIEP--------------------NLGINCCTILDRYPAPESALANIYPADPRF 258
             +                               +   I+ R+PA   A       D   
Sbjct: 393 EALRNLPDWKESAQTFEWGSDFGGDDETVLTWHFDRPVIVHRFPAEIKAFYMKRDPDDDR 452

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
                                   +     ++++   +         D  +L        
Sbjct: 453 LAMGIDVLAPEGYGEIIGGGERATD-LDFLKEQI---EAHDLPEDVFDW-YLDLRKFGSV 507

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
             SG  +G +R V  +TG +++ E I  P + + 
Sbjct: 508 PHSGFGLGLERTVSWITGRDHVRETIPFPRTIAR 541


>gi|157129935|ref|XP_001661824.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108872015|gb|EAT36240.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 480

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 106/358 (29%), Gaps = 48/358 (13%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI-RAFS 63
             H R +       L  R+       +Y     F +I +  +  +      E  + R  S
Sbjct: 141 HLHLRPQVSSLASTLRVRHHATKCFNDYLDREGFFQIHTPIITSNDCEGAGEAFLVRPAS 200

Query: 64  TELIIQDH----------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +L+ Q              +  YL  S +    + ++ G  K++ F   +R       +
Sbjct: 201 ADLLKQMAKKDVPLDRAYFDRQAYLTVSGQLHL-EAMSHGLGKVYTFGPTFRAENSKSPI 259

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF MLE   A     + ++D  N I    +   + +    + +     +    +  E
Sbjct: 260 HLSEFYMLELEEAFM---ETLEDLTNRIESMIKHVTKSLLDVASEDLAAVRKLTDDSTLE 316

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
               + +           +   H+L     +    V  ++  +      L+         
Sbjct: 317 ESFSWLDKPYPRITF---KEAIHVLEQNKSKLKSVVRPEEGINKEQELFLVSH------F 367

Query: 233 NCCTILDRYPAPESALANI-YPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEK 290
            C   +  +P    +        +P      + L     EL        +    + +   
Sbjct: 368 QCPLFVIDWPKAIKSFYMRENRTEPALVDAMDFLVPHVGELVGGSVRENEYDRLKAKLPD 427

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +   +             +L         ++G  +G +R +  V   +NI +VI  P 
Sbjct: 428 QEALR------------WYLELRKFGSVPTAGFGLGLERYLCWVLNVHNIRDVIPFPR 473


>gi|58038708|ref|YP_190672.1| lysyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|58001122|gb|AAW60016.1| Lysyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 212

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 68/218 (31%), Positives = 98/218 (44%), Gaps = 12/218 (5%)

Query: 11  NRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD 70
           +      R P L +R  +  S+R +F E  ++E+++      PG E H+R F TEL   D
Sbjct: 7   DPGRIAERLPLLERRAQMVRSVRTFFEERGYLEVETPFAVPVPGEEVHLRCFRTELERPD 66

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
             R+  +L TSPEF+ K+++AA    +F  A  WRNGE    H PEFTMLEWYR      
Sbjct: 67  GSREARFLHTSPEFAMKRIVAATGRPVFQMARVWRNGEASNTHAPEFTMLEWYRPGADLS 126

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            LM +    +R                  +     E +T+  AFARY   DL  T  N +
Sbjct: 127 SLMDETEAFLRALLPPV----VHRGMDVIDLSLPFERLTMQAAFARYVGADLLGTAGNAE 182

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                     A+QA + + + ++W   FS        P
Sbjct: 183 --------ALARQAHVGLRNGESWETCFSGFFWSVWSP 212


>gi|298500780|ref|ZP_07010583.1| lysyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|297540561|gb|EFH76619.1| lysyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 277

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 49/107 (45%), Gaps = 17/107 (15%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ + S++R + +  QF+E+++ 
Sbjct: 151 LRPLPEKFHGLTDQEMRYRQRYVDLIVNENSRNAFIVRSKVMSAIRNFMISKQFMEVETP 210

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
            +   PG  +  R F T     + +  P+YL+ +PE   K+L+    
Sbjct: 211 MMHVIPGGAS-ARPFITH---HNALDMPMYLRIAPELYLKRLVVGVL 253


>gi|297518702|ref|ZP_06937088.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 260

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 54/115 (46%), Gaps = 17/115 (14%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R              + R+ I +++R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F    
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINR 260


>gi|18976527|ref|NP_577884.1| asparaginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|18892078|gb|AAL80279.1| asparaginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 437

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/352 (16%), Positives = 106/352 (30%), Gaps = 49/352 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           +  +    R    +    +  +  +  + RE+ +++ + E+    L      G  T    
Sbjct: 122 LDYRHLHIRT--PKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVEGGAT---- 175

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L    +  K  YL  S +   +  +    EK++    ++R  +     H  EF  L
Sbjct: 176 ----LFKLKYFDKYAYLSQSAQLYLEAAIFG-LEKVWSLTPSFRAEKSRTRRHLTEFWHL 230

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A      +MK    ++    +   +       +                       
Sbjct: 231 ELEAAWMDLWDIMKVEEELVSYMVQRTLELRKKEIEMFR--------------------- 269

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D  TTL N + P   + Y +A         +  W D         +      +    +  
Sbjct: 270 DDLTTLKNTEPPFPRISYDEAIDILQSKGINVQWGDDLGADEERVLTEE--FDRPFFVYG 327

Query: 241 YPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YP    +      P DPR     +     +       E++    QR   +   +   +I 
Sbjct: 328 YPKQIKAFYMKEDPNDPRKVLAAD-----MLAPEGYGEIIGGS-QRE--DDYEKLLNRIL 379

Query: 300 NETY-PID-EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E   P D E +L          SG  +G +RLV  V   ++I      P +
Sbjct: 380 EEGMDPKDYEWYLDLRKYGSVPHSGFGLGVERLVAWVLKLDHIRWASLFPRT 431


>gi|257460371|ref|ZP_05625472.1| aspartyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257441702|gb|EEV16844.1| aspartyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 584

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/419 (12%), Positives = 104/419 (24%), Gaps = 102/419 (24%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDHIRK----- 74
              R+    + R       F+E+++  L   +P     ++            + +     
Sbjct: 140 FKMRSKAAIAARNALDRLGFVEVETPILTRATPEGARDYLVPSRVYPGSFYALPQSPQLF 199

Query: 75  ---------PLYLQTSPEF------------SCKKLLAAGEEKIFCFAH----------- 102
                      Y Q +  F              +  +       +               
Sbjct: 200 KQLLMCSGFDKYFQIARCFRDEDLRADRQPEFTQIDIEMSFNTQYDVMRVAEEVLKDIFK 259

Query: 103 -AWRNGEQGCLHQPEFTMLEWY----------RAHESYEQLMKDCMNII----------- 140
              R       H      +E Y                  + +   N I           
Sbjct: 260 SCGREIVTPFRHMEYKDAMELYGSDKPDLRYDMPFIDVADIFEKSSNEIFSNLAKDRKAN 319

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           R  A         F       F E      A+  A     + G         ++  L   
Sbjct: 320 RVKALKVEGGDLKFSKRQMQGFEEYVKKFGAQGLAFIQVKEDGLKGPLVKFFEKSELDEL 379

Query: 201 AQQAGIRVAHDDTWS----------------------------DIFSRILIEKIEPNLGI 232
            ++ G++V     +                              +    ++         
Sbjct: 380 IKRCGLKVGDVVFFGAGKKKIVLDYMGRFRIFLANELGLIDPNRLEFLWVVNFPMFEQND 439

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--- 289
           +       +P       +    +   +  +++    IEL      +     Q   F    
Sbjct: 440 DGSYSAMHHPFTMPNNPDEPDLEDITSIAYDVVLNGIELGGGSIRIHKADIQEKVFRLLK 499

Query: 290 -KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +  ++++K            L  L+   P   GIA+GFDRL+MLVTG+++I EVI  P
Sbjct: 500 IEPAEQREKFG--------FLLDALSFGAPPHGGIAIGFDRLMMLVTGSSSIREVIAFP 550


>gi|195867868|ref|ZP_03079867.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|195660445|gb|EDX53703.1| asparaginyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
          Length = 454

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 109/342 (31%), Gaps = 25/342 (7%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R R       +  R  +  ++ E+  +N++  + +     +            +   
Sbjct: 123 AHLRPRTNLFHAIMKVRATLAFAVHEFMNQNEYSWLAAPLFTGNDAEGAGETFSIQKFDN 182

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHE 127
           ++   K  +L  + +   +    A    ++ F   +R  +     H  EF M+E   A  
Sbjct: 183 EEFFGKQTHLSVTGQLQAEAYAQA-FGNVYTFGPTFRAEKSHTNRHLAEFWMIEPEMAFM 241

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
             + +      +I+   +   +K             E       E   +     + +  +
Sbjct: 242 DLKGMQDIVEILIKHVIKAVLEKN--------QQELEFLAQRNDENLIKKLQKVVDSKFE 293

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
             +  D   +   A ++G +   ++  +           +          +   YP    
Sbjct: 294 RIEYKDAVKILADAVKSGHQFEDNEIFFGMDLGSEHERYMCETYHQGPVFLQ-NYPKDIK 352

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           A       D +     +L    +       +  D  E     ++  + K  I +  + +D
Sbjct: 353 AFYMKLNDDQQTVASTDLLIPGVGELVGGSQREDNYE--KLLKRCQELKMPIESLQWYLD 410

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              L      M  SSG  +GF+RLVM VTG NNI + I  P 
Sbjct: 411 ---LRRFGYYM--SSGFGIGFERLVMYVTGVNNIKDTIPFPR 447


>gi|291463763|pdb|3M4P|A Chain A, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
           In Complex With Asparaginyl-Adenylate
 gi|291463764|pdb|3M4P|B Chain B, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
           In Complex With Asparaginyl-Adenylate
 gi|291463765|pdb|3M4P|C Chain C, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
           In Complex With Asparaginyl-Adenylate
 gi|291463766|pdb|3M4P|D Chain D, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
           In Complex With Asparaginyl-Adenylate
 gi|291463767|pdb|3M4Q|A Chain A, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
 gi|291463768|pdb|3M4Q|B Chain B, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs)
          Length = 456

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 61/351 (17%), Positives = 109/351 (31%), Gaps = 52/351 (14%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFS 63
           ++    R  H   +  L  R+ IQ   R+Y+ +N F EI   ++  +   G  T      
Sbjct: 142 NRHIVIRSEH--TQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGGST------ 193

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
             L    +  +P YL  S +   + ++ A   K FC   ++R  +     H  E+  LE 
Sbjct: 194 --LFKLQYFNEPAYLTQSSQLYLESVI-ASLGKSFCMLSSYRAEQSRTVRHLAEYLHLEA 250

Query: 123 YRAHESYEQLMKD----CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
                S+E L+         +I     V   KI         P    + +T A+      
Sbjct: 251 ELPFISFEDLLNHLEDLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYAD------ 304

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
                                     GI        + +  S     ++   +G  C   
Sbjct: 305 ------------------AIKYCNDHGILNKDKPFEYGEDISEKPERQMTDEIG--CPIF 344

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           +  +P+   +   +  P  P  T+  +L    +         +   +      + M   K
Sbjct: 345 MIHFPSKMKAFYMSKVPGHPDLTESVDLLMPGVGEIVGGSMRIWNYD------ELMGAYK 398

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  P                G  +G +RLVM + G ++I +V   P 
Sbjct: 399 ANGLNPDPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPR 449


>gi|254584945|ref|XP_002498040.1| ZYRO0G00726p [Zygosaccharomyces rouxii]
 gi|238940934|emb|CAR29107.1| ZYRO0G00726p [Zygosaccharomyces rouxii]
          Length = 552

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/353 (13%), Positives = 98/353 (27%), Gaps = 51/353 (14%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            +  R +    LR +F      E+    +      G  T 
Sbjct: 228 DPSLLLDQRHLALRGETLSSMMKVRAIWMKCLRRFFENEGLTEVTPPCMVQTQVEGGST- 286

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   ++  +  +L  S +   +  L A    ++C   ++R  +     H  E+
Sbjct: 287 -------LFKLNYYGEEAFLTQSSQLYLETCL-ASLGDVYCVQESFRAEKSHTRRHLSEY 338

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E       ++ L+     +         +                       A  + 
Sbjct: 339 THIEGELGFIDFDDLLSHLEKLFVETVGYIMEDPVGS------------------AIVKQ 380

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCC 235
            N D         + D         + G+     + +   D  +     K+   +G+   
Sbjct: 381 LNPDFKAPTYPFKRLDYKDALEWLNEHGVPNEDGEKFKFGDDIAEAAERKMVDTMGV--P 438

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             L R+PA   S        DPR T+  ++   N+              +    E   +E
Sbjct: 439 IFLIRFPAEIKSFYMPRCKDDPRVTESVDVLMPNVGEITGGSMRT--WNEADLLEGYQRE 496

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           K       + +D+             G  +G +R++  +     + +    P 
Sbjct: 497 KIDHTPYYWYLDQR----KYGSVPHGGYGLGTERILAWLCNRYTVRDCSLYPR 545


>gi|195488867|ref|XP_002092495.1| GE11636 [Drosophila yakuba]
 gi|194178596|gb|EDW92207.1| GE11636 [Drosophila yakuba]
          Length = 460

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 111/361 (30%), Gaps = 57/361 (15%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R       +  R+  Q ++ +Y     F++I++  L  +          F  + 
Sbjct: 124 HLHLRSRVDFVAAQMRVRHKAQKAIHDYMDAQDFVQINTPLLTTNDCEGAGE--VFRVQP 181

Query: 67  IIQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
             +D               +     +L  S +    + +  G    +  + A+R      
Sbjct: 182 DSEDLLKQMKRPNVPVEQSYFDGKAFLSVSGQLHL-EAMTYGLGNTYTLSPAFRAENSKS 240

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
            LH  EF M E   A   + ++++     I    +    ++      + +        + 
Sbjct: 241 PLHLAEFYMFEAELA---HLEVLEKLAQFIEKMLKSVTNRLLETSAEDLSFCQRNSNSS- 296

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                  +++            D  L  LQ  +  ++   +      FS+     +  + 
Sbjct: 297 -------SDLPWLQVPWKKISYDEALQVLQENKNSLKTPINLNEG--FSKDQEFFLVDHC 347

Query: 231 GINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRF 288
           G      +  +PA +          +P      +L    + ELC       DP   R   
Sbjct: 348 G--APVFVVDWPAQQKPFYMKISRTNPNRVHALDLLMPAVGELCGGSLRESDPDILRSH- 404

Query: 289 EKEMQEKKKIYNETYPID-EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                          P D E ++         + G  MGF+R + LVTG  NI +VI  P
Sbjct: 405 ------------PQLPKDLEWYVDLRKYGGIPTGGFGMGFERYLQLVTGVKNIRDVIPFP 452

Query: 347 F 347
            
Sbjct: 453 R 453


>gi|320334441|ref|YP_004171152.1| Asparaginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755730|gb|ADV67487.1| Asparaginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 444

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 111/350 (31%), Gaps = 30/350 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R    L  R+ +Q ++ ++F    FI  D+     +    T      
Sbjct: 114 MDHRHLWARHR--RPWAILRVRDCVQRAVVDFFHGEGFIRFDAPFFTPNAAEGT------ 165

Query: 64  TELIIQDHIRKP-LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           TEL   D   +   YL  + +   +    A   K++ F   +R  +     H  EF M+E
Sbjct: 166 TELFEIDLFGEDKAYLSQTGQLHAEAGALA-FGKVYTFGPTFRAEKSKTRRHLLEFWMIE 224

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  ++ + M      +      A ++      +      +      AE         
Sbjct: 225 PEVAPSNHTENMNLQERFVSFLVRRALEECTEELQLLGRDLDKLR--PAAEGNYPRVTYT 282

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               +      DR L                 W D         +  +   +   ++++Y
Sbjct: 283 QALDIIRQHIEDRDLPPNVQDDV-----QPVEWGDDLGAPHETILGYH--FDRPVMIEKY 335

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           PA   +      P DP      ++ A     E+    + + D    + R E E    +  
Sbjct: 336 PAAIKAFYMQPDPQDPTVALCDDMIAPEGYGEIIGGSERIHDYELLKGRIEHEGLPLEAF 395

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + +D             +G  MG +R++  +TG ++I E I  P  
Sbjct: 396 D---WYLDLR----RYGSVPHAGFGMGLERVIAWITGIDHIREAIPFPRM 438


>gi|67471183|ref|XP_651543.1| asparaginyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56468293|gb|EAL46156.1| asparaginyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 451

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 61/351 (17%), Positives = 109/351 (31%), Gaps = 52/351 (14%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFS 63
           ++    R  H   +  L  R+ IQ   R+Y+ +N F EI   ++  +   G  T      
Sbjct: 137 NRHIVIRSEH--TQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGGST------ 188

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
             L    +  +P YL  S +   + ++ A   K FC   ++R  +     H  E+  LE 
Sbjct: 189 --LFKLQYFNEPAYLTQSSQLYLESVI-ASLGKSFCMLSSYRAEQSRTVRHLAEYLHLEA 245

Query: 123 YRAHESYEQLMKD----CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
                S+E L+         +I     V   KI         P    + +T A+      
Sbjct: 246 ELPFISFEDLLNHLEDLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYAD------ 299

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
                                     GI        + +  S     ++   +G  C   
Sbjct: 300 ------------------AIKYCNDHGILNKDKPFEYGEDISEKPERQMTDEIG--CPIF 339

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           +  +P+   +   +  P  P  T+  +L    +         +   +      + M   K
Sbjct: 340 MIHFPSKMKAFYMSKVPGHPDLTESVDLLMPGVGEIVGGSMRIWNYD------ELMGAYK 393

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  P                G  +G +RLVM + G ++I +V   P 
Sbjct: 394 ANGLNPDPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPR 444


>gi|167536459|ref|XP_001749901.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771616|gb|EDQ85280.1| predicted protein [Monosiga brevicollis MX1]
          Length = 423

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 1/96 (1%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             +R EL+    ELCNA  EL DP EQR RFE + +E+++  +E    DEDF   L   +
Sbjct: 321 HLERMELFINGAELCNAYQELNDPAEQRRRFEAQHRERQQGNDELPLPDEDFCQALEAGL 380

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           P + G  +G DR++M+++G  +I +V+  P     Q
Sbjct: 381 PPTVGWGLGVDRVIMVLSGKPHIRDVLAFPILAPKQ 416



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 65/197 (32%), Gaps = 21/197 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           R  L  RN + S++RE+F    F+E+++  L    G     R F T     + ++  L+L
Sbjct: 214 RQTLKMRNQVLSTIREFFALRDFVEVETPILSAQSGGAI-ARPFITRA---NALQADLHL 269

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           + +PE   K+L+  G  ++F     +RN        P        RA             
Sbjct: 270 RIAPELYLKRLVIGGLHRVFEIGKVFRNEVNKVYADPGNAGPVLRRAC---------QEL 320

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
            +       N           N  +E      A+   R    D        + P     +
Sbjct: 321 HLERMELFINGAELCNAYQELNDPAEQRRRFEAQHRERQQGND--------ELPLPDEDF 372

Query: 199 LQAQQAGIRVAHDDTWS 215
            QA +AG+         
Sbjct: 373 CQALEAGLPPTVGWGLG 389


>gi|308189992|ref|YP_003922923.1| asparagine--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624734|gb|ADN69039.1| asparagine--tRNA ligase [Mycoplasma fermentans JER]
          Length = 454

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 108/348 (31%), Gaps = 34/348 (9%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE--- 65
               +R    R  +L R+ +   + +YF E+ ++  ++  +  +   E     F      
Sbjct: 124 PHVRHRTNLLRATMLIRSTLAKEVHKYFDEHGYLYFNAPIITSND-GEGAGETFVVNDEN 182

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
                   +   L  + +   +       +K++ FA  +R        H  EF M+E   
Sbjct: 183 SKDPFFGTRKATLGVTGQLHAESYAIG-FKKVYTFAPTFRAEHSNTKKHAAEFWMIEPEV 241

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A    +  +K   ++++       +             +E     + E    +    L  
Sbjct: 242 AFYELKDAIKLADDMLKS----VIKNTIKKHPAEFKFLNETVDKGLLERLNHFLKTKLSV 297

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                    R  +   A+        D  +    +      I   +  N    +  +P  
Sbjct: 298 IDY------RDAIKELAKVKDQFENQDIEFGLDLATEHERYISEKI-FNGPVAVINFPKS 350

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
             A       D      F+L    I              QR     ++ ++      +  
Sbjct: 351 FKAFYMQQNDDNETVAAFDLLVPGIGELIGGS-------QREVRYDKLLQRALEVGISQE 403

Query: 305 IDEDFLACL----TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + +L       +    SSG  +GF+RLVM VTG +NI +VI  P +
Sbjct: 404 ELQWYLDLRRFGDSG---SSGFGVGFERLVMYVTGVDNIRDVIPYPRT 448


>gi|13357925|ref|NP_078199.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762151|ref|YP_001752448.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920120|ref|ZP_02931531.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508768|ref|ZP_02958236.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701862|ref|ZP_02971522.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|20139951|sp|Q9PQC6|SYN_UREPA RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|189083485|sp|B1AJ04|SYN_UREP2 RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|11271289|pir||A82901 asparaginyl-tRNA synthetase UU365 [imported] - Ureaplasma
           urealyticum
 gi|6899346|gb|AAF30774.1|AE002133_7 asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827728|gb|ACA32990.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902485|gb|EDT48774.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675705|gb|EDT87610.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701165|gb|EDU19447.1| asparaginyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 454

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/342 (15%), Positives = 110/342 (32%), Gaps = 25/342 (7%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R R       +  R  +  ++ E+  +N++  + +     +            +   
Sbjct: 123 AHLRPRTNLFHAIMKVRATLAFAVHEFMNQNEYSWLAAPLFTGNDAEGAGETFSIQKFDN 182

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHE 127
           ++   K  +L  + +   +    A    ++ F   +R  +     H  EF M+E   A  
Sbjct: 183 EEFFGKQTHLSVTGQLQAEAYAQA-FGNVYTFGPTFRAEKSHTNRHLAEFWMIEPEMAFV 241

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
             + +     ++++   +   +K             E       E   +     + +  +
Sbjct: 242 DLKGMQDIVEDLVKHVIKAVLEKN--------QQELEFLAQRNDENLIKKLQKVVESKFE 293

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
             +  D   +   A + G +  +++  +           +          +   YP    
Sbjct: 294 RIEYKDAVKILADAVKNGHQFENNEIFFGMDLGSEHERYMCETYHQGPVFLQ-NYPKDIK 352

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           A       D +     +L    +       +  D  E     ++  + K  I +  + +D
Sbjct: 353 AFYMKLNDDQQTVASTDLLIPGVGELVGGSQREDSYE--KLLKRCQELKMPIESLQWYLD 410

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              L      M  SSG  +GF+RLVM VTG NNI + I  P 
Sbjct: 411 ---LRRFGYYM--SSGFGIGFERLVMYVTGVNNIKDTIPFPR 447


>gi|332230291|ref|XP_003264323.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Nomascus
           leucogenys]
          Length = 548

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 106/332 (31%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+M+    R++F +  + E+   +L      G  T        L   D+  +  +L
Sbjct: 245 ILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 296

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E      +++ L+    
Sbjct: 297 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLE 355

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +          NP  +P          R    D    L   D       
Sbjct: 356 DLVCDVVDRVLKSPAGSIVHELNPNFQPPKRPF----KRMNYSDAIVWLKEHDVK----- 406

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 407 ----KEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 456

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+        D  E    ++     ++ I    Y    D       
Sbjct: 457 RLTESVDVLMPNVGEIVGGSMRTYDSEEILAGYK-----REGIDPTPYYWYTD--QRKYG 509

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 510 TCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 541


>gi|295669995|ref|XP_002795545.1| asparaginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226284630|gb|EEH40196.1| asparaginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 580

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/353 (13%), Positives = 104/353 (29%), Gaps = 51/353 (14%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +    Y  R            +  R     + R+ F E   +E+   ++  +     + +
Sbjct: 256 DPHTLYDNRHLVLRGETSSSVMKVRAATLRAFRKAFEEKGMLEVTPPAMVQTQVEGGSTL 315

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
             F       D+  +  +L  S +   +  L +    +FC   ++R  +     H  E+T
Sbjct: 316 FEF-------DYYGEKAFLTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEYT 367

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      S+  L+    ++I    ++   +    Q V     +        +      
Sbjct: 368 HVEAELDFISFTDLLDYLEDMICRVIDLVLSEPLIAQYVKNLNPTFTPPSRPFKRMKYAE 427

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            I+     + P++                      + D  +     K+     +N    L
Sbjct: 428 AIEWLVEHNIPNEE----------------GQPHRFGDDIAEAAERKM--TDMLNRPIFL 469

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
             +P    +      P DPR T+  ++    +         +D  +     E     K++
Sbjct: 470 THFPTEIKAFYMKKDPDDPRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMAAYKRE 524

Query: 298 IYNETYPI---DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + +      D+             G  +G +R +  + G   + E    P 
Sbjct: 525 GMDPSPYYWYTDQR----KYGTSPHGGYGLGLERFLAWMCGRYTVRECCLYPR 573


>gi|167376054|ref|XP_001733836.1| asparaginyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165904855|gb|EDR29988.1| asparaginyl-tRNA synthetase, cytoplasmic, putative [Entamoeba
           dispar SAW760]
          Length = 451

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 64/352 (18%), Positives = 111/352 (31%), Gaps = 54/352 (15%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFS 63
           ++    R  H   +  L  R+ IQ   R+Y+ +N F EI   ++  +   G  T      
Sbjct: 137 NRHIVIRSEH--TQQVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGGST------ 188

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
             L    +  +P YL  S +   + ++ A   K FC   ++R  +     H  E+  LE 
Sbjct: 189 --LFKLQYFNEPAYLTQSSQLYLESVI-ASLGKSFCMLSSYRAEQSRTVRHLAEYLHLEA 245

Query: 123 YRAHESYEQLMKD----CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
                S+E L+         +I     V   KI         P    + +T A+      
Sbjct: 246 ELPFISFEDLLNHLEDLVCTVIDNVMAVHGDKIRKMNPHLKLPTRPFKRMTYAD------ 299

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
                                     GI        + +  S     ++   +G  C   
Sbjct: 300 ------------------AIKYCNDHGILNKDKPFEYGEDISEKPERQMTDEIG--CPIF 339

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEK 295
           +  +P+   +   +  P  P  T+  +L    + E+      + D  E        M   
Sbjct: 340 MIHFPSKMKAFYMSKVPGHPDLTESVDLLMPGVGEIVGGSMRIWDYNEL-------MGAY 392

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           K       P                G  +G +RLVM + G ++I +V   P 
Sbjct: 393 KANGLNPDPYYWYTQQRKYGSCPHGGYGLGVERLVMWLLGEDHIRKVCLYPR 444


>gi|114052923|ref|NP_001040037.1| asparaginyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|193806383|sp|Q2KJG3|SYNC_BOVIN RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|86823811|gb|AAI05359.1| Asparaginyl-tRNA synthetase [Bos taurus]
          Length = 559

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 110/332 (33%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R++I    R++F +  + EI   +L      G  T        L   D+  +  YL
Sbjct: 256 ILKARSVITRCFRDHFFDRGYHEITPPTLVQTQVEGGAT--------LFKLDYFGEEAYL 307

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A    +FC A ++R  +     H  E+T +E      ++E+L+    
Sbjct: 308 TQSSQLYLETCIPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNRLE 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +        + NP  +P                    ++  D       
Sbjct: 367 DLVCDVVDRVLKSPAGNIVRDLNPNFKPPKRPF-------------KRMNYSDAIVWLKE 413

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      +   +   R++         IN   +L R+P    S      P DP
Sbjct: 414 HNIKKEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 467

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     ++ I    Y    D       
Sbjct: 468 RLTESVDVLMPNVGEIVGGSMRIWDNEEILAGYK-----REGIDPTPYYWYTD--QRKYG 520

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 521 TCPHGGYGLGLERFLTWILDRYHIRDVCLYPR 552


>gi|297702663|ref|XP_002828292.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like, partial
           [Pongo abelii]
          Length = 407

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+M+    R++F +  + E+   +L      G  T        L   D+  +  +L
Sbjct: 104 ILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 155

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E      +++ L+    
Sbjct: 156 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLE 214

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +          NP  +P          R    D    L   D       
Sbjct: 215 DLVCDVVDRVLKSPAGSVVHELNPNFQPPKRPF----KRMNYSDAIVWLKEHDVK----- 265

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 266 ----KEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 315

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+         +   E     E     K++  + T      D+      
Sbjct: 316 RLTESVDVLMPNVGEIVGGSMRICDSE-----EILAGYKREGIDPTPYYWYTDQR----K 366

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 367 YGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 400


>gi|282163156|ref|YP_003355541.1| asparaginyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155470|dbj|BAI60558.1| asparaginyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 431

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 51/348 (14%), Positives = 103/348 (29%), Gaps = 50/348 (14%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTEL 66
            H   R       +  ++ + S+ RE+F  ++F E+    +  S   G  T        L
Sbjct: 121 RHLDVRSKQLVAIMKVKDSVLSAAREWFRNHEFFEVTPPIIISSACEGGST--------L 172

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
               +     YL  S +   + L+    EK++    ++R  +     H  E+  +E   A
Sbjct: 173 FELKYFEDKAYLSQSAQLYLESLIFG-LEKVYSITPSFRAEKSRTTRHLAEYWHIEGEMA 231

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
                +++     ++        ++                         R    D    
Sbjct: 232 WMGLYEMIDMLEQLVCYVCNRVGEERAEE--------------------IRLVGGD-PEY 270

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                 P   + Y +A +       +    + F      ++  +   +    +  YPA  
Sbjct: 271 FKGLKAPFPRITYDEAVKVLQADGFEFKPGEDFGTHEERQLSTHY--DKPLFITEYPAEV 328

Query: 246 SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            A       + +      +      E+  A +   D      R       +K+  +    
Sbjct: 329 KAFYMKDAGNGKVLNVDMIAPKGFGEIIGASERETDLAILEER------IRKQGEDPAKY 382

Query: 305 IDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
               +L          SG  MG +RLV  + G  +I + I  P + S 
Sbjct: 383 --AWYLDLRRYGSVPHSGFGMGTERLVRWICGLEHIRDTIPYPRTISR 428


>gi|148231213|ref|NP_001086948.1| asparaginyl-tRNA synthetase [Xenopus laevis]
 gi|50414890|gb|AAH77811.1| Nars-prov protein [Xenopus laevis]
          Length = 559

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/332 (14%), Positives = 103/332 (31%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
               R+ +    R +F +  + E+   +L      G  T        L   D+  +  YL
Sbjct: 256 IFKVRSTVIHCFRNHFFDRGYYEVTPPTLVQTQVEGGST--------LFKLDYFGEEAYL 307

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A     FC A ++R  +     H  E+T +E      ++E L++   
Sbjct: 308 TQSSQLYLETCIPA-LGDSFCIAQSYRAEQSRTRRHLAEYTHIEAECPFMTFENLLERLE 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +    + +P  +P                           +    
Sbjct: 367 DLVCDVVDRVLKSPVASLLYDLHPEFKPPKRPFRRM-------------------NYSEA 407

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++  ++      +          +      IN   +L R+PA   S        D 
Sbjct: 408 ITWLKEHDVKKDDGTYYEFGEDIPEAPERLMTDAINEPILLCRFPAEIKSFYMQRCAEDK 467

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     +++I    Y    D       
Sbjct: 468 RLTESVDVLMPNVGEIVGGSMRIWDSEELLEGYK-----REEIDPTPYYWYTD--QRKYG 520

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +   ++I +V   P 
Sbjct: 521 TCPHGGYGLGLERFLTWILNRHHIRDVCLYPR 552


>gi|297716158|ref|XP_002834410.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Pongo
           abelii]
          Length = 515

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+M+    R++F +  + E+   +L      G  T        L   D+  +  +L
Sbjct: 212 ILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 263

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E      +++ L+    
Sbjct: 264 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLE 322

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +          NP  +P          R    D    L   D       
Sbjct: 323 DLVCDVVDRVLKSPAGSVVHELNPNFQPPKRPF----KRMNYSDAIVWLKEHDVK----- 373

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 374 ----KEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 423

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+         +   E     E     K++  + T      D+      
Sbjct: 424 RLTESVDVLMPNVGEIVGGSMRICDSE-----EILAGYKREGIDPTPYYWYTDQR----K 474

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 475 YGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 508


>gi|332158401|ref|YP_004423680.1| asparaginyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331033864|gb|AEC51676.1| asparaginyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 434

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 106/351 (30%), Gaps = 47/351 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           +  +    R    +    +  +  +  + RE+ +   + E+    L      G  T    
Sbjct: 119 LDYRHLHIRS--PKVSAIMKVKETLMMAAREWLLREGWHEVFPPILVTGAVEGGAT---- 172

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L    +  K  YL  S +   +  +    EK++    ++R  +     H  EF  L
Sbjct: 173 ----LFKLKYFDKYAYLSQSAQLYLEAAIFG-LEKVWSLTPSFRAEKSRTRRHLTEFWHL 227

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A      +MK    ++    +   +       +                       
Sbjct: 228 ELEAAWMDLWDIMKVEEELVSYMVQRTLELRRKEIEMFR--------------------- 266

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D  TTL N + P   + Y +A +          W D         +      +    +  
Sbjct: 267 DDLTTLKNTEPPFPRISYDEAIEILQSKGVKIEWGDDMGADEERVLTEE--FDRPFFVYG 324

Query: 241 YPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ-EKKKI 298
           YP    +      P DPR     +     +       E++   E+   +EK ++  K++ 
Sbjct: 325 YPKHIKAFYMKEDPKDPRKVLAAD-----MLAPEGYGEIIGGSEREDDYEKLVKRIKEEG 379

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +      E +L          SG  +G +RLV  V   ++I      P +
Sbjct: 380 MDPKDY--EWYLDLRKYGSVPHSGFGLGVERLVAWVLKLDHIRWAALFPRT 428


>gi|292625063|ref|XP_696748.3| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Danio rerio]
 gi|220678632|emb|CAX13723.1| novel protein similar to vertebrate asparaginyl-tRNA synthetase
           (NARS) [Danio rerio]
          Length = 556

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 57/335 (17%), Positives = 109/335 (32%), Gaps = 46/335 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+ +    R++F    + EI   +L      G  T        L   ++  +  YL
Sbjct: 253 ILKVRSAVTQCFRDHFFSRGYCEITPPTLVQTQVEGGST--------LFGLNYFGENAYL 304

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A     FC A ++R  +     H  E+T +E      SYE L+    
Sbjct: 305 TQSSQLYLETCIPA-LGDTFCIAQSYRAEQSRTRRHLSEYTHIEAECPFMSYEDLLNRLE 363

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +    + NP  +P                    ++  +  D    
Sbjct: 364 DLVCDVVDRVLKSPAAPLLYDINPDFKPPKRPF-------------KRMNYTEAIDWLKE 410

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   +  G      +   +   R++         IN   +L R+PA   S      P D 
Sbjct: 411 HNIKKDDGTFYEFGEDIPEAPERLM------TDSINETILLCRFPAEIKSFYMQRCPEDR 464

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED---FLAC 312
           R T+  + L     E+      + D  E    ++     ++ I    Y    D   F   
Sbjct: 465 RLTESVDVLMPNVGEIVGGSMRIWDSDELLEGYK-----REGIDPTPYYWYTDQRKF--- 516

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                   G  +G +R +  +   ++I +V   P 
Sbjct: 517 --GTCPHGGYGLGLERFLTWLLNRHHIRDVCLYPR 549


>gi|326474010|gb|EGD98019.1| asparaginyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326478207|gb|EGE02217.1| asparaginyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 580

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 102/335 (30%), Gaps = 45/335 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHIRKPLYLQ 79
            L  R  +  + R+ F + Q +E+   ++  +     + +  F       D+  +  YL 
Sbjct: 276 VLKVRAAVVRAFRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEF-------DYYGEKAYLT 328

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S +   +  L A    +FC   ++R  +     H  E+T +E      ++  L+     
Sbjct: 329 QSSQLYLETCL-ASLGDVFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEE 387

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           II    +++                         AF +  N D         +       
Sbjct: 388 IICSVIDISLAD------------------PQIAAFVKQLNPDFTPPARPFRRMRYSEAI 429

Query: 199 LQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP-AD 255
               + GI    D      D  +     K+     IN   +L  +PA   A        D
Sbjct: 430 EWLNEHGINNEEDKPHSFGDDIAEAAERKM--TDIINKPILLTHFPAEIKAFYMKKDAED 487

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLAC 312
           PR T+  ++    +         +D  +     E     KK+  + T      D+     
Sbjct: 488 PRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMGAYKKEGMDPTPYYWYTDQR---- 538

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                   G  +G +R +  + G   + E    P 
Sbjct: 539 KYGTSPHGGYGLGLERFLAWMCGRYTVRECSLYPR 573


>gi|15223302|ref|NP_177254.1| SYNC3; ATP binding / aminoacyl-tRNA ligase/ asparagine-tRNA ligase/
           aspartate-tRNA ligase/ nucleic acid binding / nucleotide
           binding [Arabidopsis thaliana]
 gi|20140327|sp|Q9SSK1|SYNC3_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 3; AltName:
           Full=Asparagine--tRNA ligase 3; Short=AsnRS 3
 gi|5902407|gb|AAD55509.1|AC008148_19 Similar to asparaginyl-tRNA synthetases [Arabidopsis thaliana]
 gi|332197025|gb|AEE35146.1| asparaginyl-tRNA synthetase, cytoplasmic 3 [Arabidopsis thaliana]
          Length = 571

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 73/283 (25%), Gaps = 19/283 (6%)

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAH 126
             D   +  +L  S +   +    A    ++ F   +R        H  EF M+E   A 
Sbjct: 298 SNDFFGRQAFLTVSGQLQVETYACA-LSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAF 356

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
                 M      ++   +    K      +      E           R   +   +  
Sbjct: 357 ADIHDDMNCAEAYVKYMCKWLMDKCGDDMELMDKNVDEG-------CTKRLNMVAKASFK 409

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
                     L     Q  +   +   W    +      +          I+  YP    
Sbjct: 410 RVTYTEAIERLEKAVAQGKVVFDNKVEWGIDLASEHERYLTEVEFDQKPIIVYNYPKGIK 469

Query: 247 ALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           A        +        L     EL             + R E+       +     P 
Sbjct: 470 AFYMRLNDDEKTVAAMDVLVPKVGELIGGSQREERYDVIKQRIEE-------MGLPMEPY 522

Query: 306 DEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            E +L        +  G  +GF+R++   TG +NI +VI  P 
Sbjct: 523 -EWYLDLRRYGTVKHCGFGLGFERMIQFATGIDNIRDVIPFPR 564


>gi|296473717|gb|DAA15832.1| asparaginyl-tRNA synthetase [Bos taurus]
          Length = 559

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 110/332 (33%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R++I    R++F +  + EI   +L      G  T        L   D+  +  YL
Sbjct: 256 ILKARSVITRCFRDHFFDRGYHEITPPTLVQTQVEGGAT--------LFKLDYFGEEAYL 307

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A    +FC A ++R  +     H  E+T +E      ++E+L+    
Sbjct: 308 TQSSQLYLETCIPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNRLE 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +        + NP  +P                    ++  D       
Sbjct: 367 DLVCDVVDRVLKSPAGNIVRDLNPNFKPPKRPF-------------KRMNYSDAIVWLKE 413

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      +   +   R++         IN   +L R+P    S      P DP
Sbjct: 414 HNIKKEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 467

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     ++ I    Y    D       
Sbjct: 468 RLTESVDVLMPNVGEIVGGSMRIWDNEEILAGYK-----REGIDPTPYYWYTD--QRKYG 520

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 521 TCPHGGYGLGLERFLTWILDRYHIRDVCLYPR 552


>gi|15807637|ref|NP_294994.1| asparaginyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 452

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 113/350 (32%), Gaps = 30/350 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R    +  R+ +Q  + E+F    F+  D+     +    T      
Sbjct: 122 MDHRHLWLRHR--RPWAIMRVRDCVQRGIVEFFHGEGFVRFDAPFFTPNAAEGT------ 173

Query: 64  TELIIQDHIRKP-LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           TEL   D   +   YL  + +   +    A  + +  F   +R  +     H  EF M+E
Sbjct: 174 TELFEIDLFGEDKAYLSQTGQLHAEAGAFALRQGLH-FGPTFRAEKSKTRRHLLEFWMVE 232

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  S+ + M     ++   A     +                      A   Y  + 
Sbjct: 233 PEVAPSSHAENMALQERMVSHLARKVLSEC----AAELEMLGRDVSKLXGAAEGNYPRVT 288

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L+   Q           Q  ++      W D         +  +   +   ++++Y
Sbjct: 289 YTEALEIIRQHIEDKDLPPNVQEDVQ---PVEWGDDLGAPHETILGHH--FDRPVMVEKY 343

Query: 242 PAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           PA   +      P DPR     ++ A     E+    + + D    + R E++    +  
Sbjct: 344 PAAIKAFYMQPDPEDPRVALCDDMIAPEGYGEIIGGSERIHDYELLKSRIEEQGLPLEAF 403

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + +D   +  +      +G  MG +R +  +TG ++I E I  P  
Sbjct: 404 D---WYLDLRRVGSM----PHAGYGMGLERFIAWMTGIDHIREAIPFPRM 446


>gi|303283380|ref|XP_003060981.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457332|gb|EEH54631.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 645

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 74/281 (26%), Gaps = 22/281 (7%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHES 128
           D   KP Y+  S + + +    A  + ++ F   +R        H  EF M+E   A   
Sbjct: 377 DFFGKPSYMTVSGQLNAEIYACAMRD-VYTFGPTFRAENSNTSRHLAEFWMVEPELAFSD 435

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            +  M      ++       +                E     +           T    
Sbjct: 436 LQDDMDCAEAYLKHCISHVLEHCDEDLEF-------FEKNVSKDNLRERLRGVATTPFAR 488

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
               +     L A++   +      W           I   +  +   I+  YP    A 
Sbjct: 489 ITYTEAVEHVLSAKK---KFEFPVEWGSDLQSEHERYICEEVYKDVPVIVRDYPKGVKAF 545

Query: 249 ANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                           L     EL               R E+   EK+           
Sbjct: 546 YMRENDDGKTVAAMDVLVPKVGELMGGSQREERLDVLERRIEEVGLEKESY--------W 597

Query: 308 DFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +L          +G  +GF+RLV  VTG  NI + I  P 
Sbjct: 598 WYLDLRRYGSVPHAGFGLGFERLVQYVTGVENIRDAIPFPR 638



 Score = 45.0 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 5/44 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            H R R          RN +  +   +F  + F  +++  +  S
Sbjct: 215 AHLRPRTNTIGAVTRVRNQLAYATHTFFQSHGFQYVNTPIITAS 258


>gi|71027745|ref|XP_763516.1| aspartyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350469|gb|EAN31233.1| aspartyl-tRNA synthetase, putative [Theileria parva]
          Length = 604

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 41/397 (10%), Positives = 103/397 (25%), Gaps = 77/397 (19%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++ +    RE+ + + F+EI +  L           
Sbjct: 220 NQDTRLDNRALDLRCFVNGVIFKIQSAVCQLYREFLLSHDFVEIHTPKLLG------GSS 273

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
              + +    +  +   L  SP+   +  +    +++F     +R        H  E+  
Sbjct: 274 EGGSSVFKFKYFDQDACLAQSPQLYKQMAICGDLKRVFEIGPVFRAENSNTHRHLCEYVG 333

Query: 120 LEWYRAHE-SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           L+        Y +++     +++       ++     +     F         +   +  
Sbjct: 334 LDMEMEILNDYTEVIDLIDQMLKSVFTGLMERNKEELDYFYKSFPSIMRFKFLQETPKIT 393

Query: 179 NID--LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI--LIEKIEPNLGINC 234
             +          +      +            H+     +  +       I     +NC
Sbjct: 394 FQEVRYCAVAMLRETELGGEIPEDLSDYDFTTEHEKLLGKLIKQKLNTDYYIIYQYPLNC 453

Query: 235 CTILDRY----------------PAPESALANIYPADPR--------------------- 257
                                  P   +  +  +  +                       
Sbjct: 454 RPFYTMPLRYGDRSAHTTNSTVNPNEHTVNSVEHNTNTTNSLNSVESVNSVETLNAVDSV 513

Query: 258 -FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFLAC 312
            +++ ++ +    E+ +    + D +E   R       +         ID    +D++  
Sbjct: 514 SWSRSYDFFMRGEEILSGAQRIHDSVELEAR------ARACG------IDVNTIKDYIEV 561

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   +G  +G +R+VML  G  NI      P  
Sbjct: 562 FRYGSFPHAGSGIGLERVVMLFLGLTNIRRTSMFPRD 598


>gi|195124475|ref|XP_002006718.1| GI21220 [Drosophila mojavensis]
 gi|193911786|gb|EDW10653.1| GI21220 [Drosophila mojavensis]
          Length = 460

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 58/367 (15%), Positives = 119/367 (32%), Gaps = 69/367 (18%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFST 64
             H R R       +  R+  Q ++ +Y  E  F++I++  L  +      E     F  
Sbjct: 124 HLHLRSRIDYIAAQMRVRHKAQKAIHDYMDELNFVQINTPILTTNDCEGAGEV----FRV 179

Query: 65  EL---------------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           +                + + +  +  +L  S +    + ++ G    + FA A+R    
Sbjct: 180 QPESAQLLKQMSRPNVPVEESYFDQKAFLSVSGQLHL-EAMSYGLGNTYTFAPAFRAENS 238

Query: 110 -GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
              LH  EF M E    +    + + +    I C  +   +++ +    + +        
Sbjct: 239 KSPLHLAEFYMFEAELVYM---EQLDELAAFIECTLKEITKRLLNSSASDLHFCQSRANA 295

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +        +++D           D  L  + A +   +          FS+     +  
Sbjct: 296 S--------SDLDWMQVPWKVMSYDEALAVVVANRDKFKTLVSADDG--FSKEQELFLVA 345

Query: 229 NLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNI-ELCNACDELLDPIEQRH 286
           + G      +  +P  +         +DP+     +L   ++ ELC       D      
Sbjct: 346 HCG--APVFVLNWPTQQKPFYMKVSRSDPQRVHALDLLMPSVGELCGGSLRESDAELLSK 403

Query: 287 --RFEKEM----QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
             +F K++    + +K                      + G  MGF+R + L+TG  NI 
Sbjct: 404 HPKFPKDLSWYVELRKYGGL-----------------PTGGFGMGFERYLQLLTGVKNIR 446

Query: 341 EVIWTPF 347
           +VI  P 
Sbjct: 447 DVIPYPR 453


>gi|225684069|gb|EEH22353.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 541

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/325 (13%), Positives = 94/325 (28%), Gaps = 40/325 (12%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           + +     EY +++    I +  L  +  +E     F        + ++  YL  SP+  
Sbjct: 249 SGVAQLFTEYMLKSGSRWISTPKLTANA-SEGGAGVFEVT-----YFKRKAYLAQSPQLY 302

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            +  +A     +F                 EF  L++ +  +S+   +      +     
Sbjct: 303 KQMCIAGDMGSVF-----------------EFIGLDFEKTFQSHYHEVLSFAEDLLVFIL 345

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
              +K F  +                    +   +     +    +    +   +  +  
Sbjct: 346 SELKKRFKKEIEVVQRSYPKAGDFRLPKDGKALRLKYMDGVALLKEAGVDVSEQEKFEND 405

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFEL 264
           +  A +     I                   +LD++P           P DP F+  ++ 
Sbjct: 406 LTTAMEKQLGRIIREKYD---------TDFYVLDKFPMAVRPFYTKACPQDPTFSNSYDF 456

Query: 265 YACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIA 323
           +    E+ +    + D  E       E     K  +      ED++       P  +G  
Sbjct: 457 FMRGEEIMSGAQRINDAKEL------EAAMVAKGLDPNDEGFEDYIGAFRQGCPPHAGGG 510

Query: 324 MGFDRLVMLVTGANNINEVIWTPFS 348
           +G +R+VM   G  NI      P  
Sbjct: 511 LGLNRIVMFFLGLPNIRLATLFPRD 535


>gi|71897197|ref|NP_001026571.1| asparaginyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|53132771|emb|CAG31935.1| hypothetical protein RCJMB04_13p14 [Gallus gallus]
          Length = 559

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 106/334 (31%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
               R+M+  + R++F  N + E+   +L      G  T        L   D+  +  YL
Sbjct: 256 IFKVRSMVVQAFRDHFFANGYYEVTPPTLVQTQVEGGST--------LFKLDYFGEEAYL 307

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A    +FC A ++R  +     H  E+T +E      S+E L+    
Sbjct: 308 TQSSQLYLETCIPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHIEAECPFISFEDLLNRLE 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +       S   ++ NP  +P                           +    
Sbjct: 367 SLVCDVVDRVLTSPASALLLDLNPNFKPPKRPFRRM-------------------NYAEA 407

Query: 198 YLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPA 254
               ++  ++      +   +         +     IN   +L R+PA   S        
Sbjct: 408 IEWLKEHDVKKDDGTYYEFGEDIPEAPERFMTDT--INEPILLCRFPAEIKSFYMQRCHD 465

Query: 255 DPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           D R T+  + L     E+      + D  E    ++     ++ I    Y    D     
Sbjct: 466 DSRLTESVDVLMPNVGEIVGGSMRIWDSEELLEGYK-----REGIDPTPYYWYTD--QRK 518

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +   ++I +V   P 
Sbjct: 519 YGTCPHGGYGLGLERFLTWILDRHHIRDVCLYPR 552


>gi|195056323|ref|XP_001995060.1| GH22841 [Drosophila grimshawi]
 gi|193899266|gb|EDV98132.1| GH22841 [Drosophila grimshawi]
          Length = 460

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 58/363 (15%), Positives = 111/363 (30%), Gaps = 61/363 (16%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------ 58
             H R R       +  R+  Q ++ +Y  E  F++I++  L  +      E        
Sbjct: 124 HLHLRARVDYIAAQMRIRHKAQKAIHDYMDELHFVQINTPILTTNDCEGAGEVFRVQPDS 183

Query: 59  -------IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
                   R      + Q +  + ++L  S +    + ++ G    +  A A+R      
Sbjct: 184 EQLLKQMARPSV--PVEQSYFDQKVFLSVSGQLHL-EAMSYGLGNTYTLAPAFRAENSKS 240

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
            LH  EF M E       + + +      I    +   Q++ +    + +   E      
Sbjct: 241 PLHLAEFYMFEAELV---HMEQLDALAAFIERMLKDITQRLLNSSASDLHFCQESAN--- 294

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                  A  D+        +           +   +     + +D FS+     +  + 
Sbjct: 295 -------AGSDIAWLQLPWQRLSYDAAMAIIMEHKDKFKSAVSAADGFSKEQELFLVAHC 347

Query: 231 GINCCTILDRYPAPESALANI-YPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHR 287
           G      +  +P  +         +DP+     +L           +  E    + Q H 
Sbjct: 348 G--APVFVIDWPTQQKPFYMKVSRSDPQRVHALDLLMPAVGELCGGSLRECDAQLLQAH- 404

Query: 288 FEKEMQEKKKIYNETYPID-EDF--LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
                           P D   +  L     +  + G  MGF+R + LVTG  NI +VI 
Sbjct: 405 -------------PQLPRDLSWYVELRKFGGL-HTGGFGMGFERYLQLVTGVKNIRDVIA 450

Query: 345 TPF 347
            P 
Sbjct: 451 FPR 453


>gi|226356057|ref|YP_002785797.1| asparaginyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|259511567|sp|C1CV26|SYN_DEIDV RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|226318047|gb|ACO46043.1| putative asparagine--tRNA ligase (asparagine translase)
           [Deinococcus deserti VCD115]
          Length = 445

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 119/353 (33%), Gaps = 36/353 (10%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +  W R    R    +  R+ +Q ++ ++F    F+  D+     +    T      
Sbjct: 115 MDQRHLWLRHR--RPWAIMRIRDCVQRAIVDFFHSEGFVRFDAPFFTPNAAEGT------ 166

Query: 64  TELIIQDHIRKP-LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           TEL   D   +   YL  + +   +    A   K++ F   +R  +     H  EF M+E
Sbjct: 167 TELFEIDLFGEDKAYLSQTGQLHAEAGAFA-FGKVYTFGPTFRAEKSKTRRHLLEFWMVE 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  +++Q M      +      A  +             E E +    +  + A   
Sbjct: 226 PEVAPSNHKQNMDLQERFVSFLVRRALDEC----------TVELEMLGRDLSKLKGAAEG 275

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT---WSDIFSRILIEKIEPNLGINCCTIL 238
               +   +  +    +++ +     V  D     W D         +  +   +   ++
Sbjct: 276 NYPRVTYTEALEIVRQHIENKDLPPNVQEDVQPVEWGDDLGAPHETILGHH--FDRPVMI 333

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEK 295
           ++YPA   +      P D R     ++ A     E+    + + D    + R E E    
Sbjct: 334 EKYPAAIKAFYMQPDPEDSRVALCDDMIAPEGYGEIIGGSERIHDYDLLKSRIEHEGLPL 393

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +      + +D   +         +G  MG +R++  ++G ++I E I  P  
Sbjct: 394 EAFD---WYLDLRRV----GSVPHAGFGMGLERVIAWISGIDHIREAIPFPRM 439


>gi|62897229|dbj|BAD96555.1| asparaginyl-tRNA synthetase variant [Homo sapiens]
          Length = 548

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 107/332 (32%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+M+    R++F +  + E+   +L      G  T        L   D+  +  +L
Sbjct: 245 ILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 296

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E      +++ L+    
Sbjct: 297 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLE 355

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +          NP  +P          R    D    L   D       
Sbjct: 356 DLVCDVVDRILKSPAGSIVHELNPNFQPPKRPF----KRVNYSDAIVWLKEHDVK----- 406

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 407 ----KEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 456

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     ++ I    Y    D       
Sbjct: 457 RLTESVDVLMPNVGEIVGGSMRIFDSEEILAGYK-----REGIDPTPYYWYTD--QRKYG 509

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 510 TCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 541


>gi|321476711|gb|EFX87671.1| hypothetical protein DAPPUDRAFT_306578 [Daphnia pulex]
          Length = 560

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 48/359 (13%), Positives = 109/359 (30%), Gaps = 64/359 (17%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           + D    +R            L  R++I  + R+++    + E+   +       G  T 
Sbjct: 237 HPDVQLDQRHMMIRGENTSKVLRLRSVITQAFRDHYSSRGYNEVAPPTFVQTQVEGGST- 295

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   ++  +  YL  S +   +  + A    ++C A ++R  +     H  E+
Sbjct: 296 -------LFELNYFGEKAYLTQSSQLYLETAIPA-LGDVYCIAQSYRAEQSRTRRHLSEY 347

Query: 118 TMLEWYRAHESYEQLMKDCMNII-----RCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           + +E      S++ L+    +++     R  A      +         P      +  +E
Sbjct: 348 SHVEAECPFISFDDLLDRLEDLVVDVSERVMASPYANLVLELNPTFVVPKKPFRRMNYSE 407

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNL 230
                                     +  ++ GI       +   +    +   K+    
Sbjct: 408 ------------------------AIVYLKENGITKEDGSFYEFGEDIPEMPERKMTDK- 442

Query: 231 GINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
            I+   +L R+PA   +      P D + T+  +L    +          D  +      
Sbjct: 443 -ISEPIMLCRFPAGIKAFYMKRCPEDRQLTESVDLLMPGVGEIIGGSMRTDDHD------ 495

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + ++  K    +  P    ++           G  +G +R +  +    +I EV   P 
Sbjct: 496 ELVEAFKAADIDPTPY-YWYIDQRRFGTCPHGGYGLGLERFLCWMLNRYHIREVCLYPR 553


>gi|298706663|emb|CBJ29592.1| Aspartyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 631

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 99/353 (28%), Gaps = 55/353 (15%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W           +  ++ +    RE      F+EI +  +     +E     F+T     
Sbjct: 314 WLDLRTPANNAIMRLQSGVCQLFRESLYAQGFMEIHTPKIIP-GESEGGAGVFTT----- 367

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHES 128
           D+  K   L  SP+   +  ++A   ++F     +R        H  EF  L+   +   
Sbjct: 368 DYFGKQACLAQSPQLYKQMAISADMGRVFEVGPVFRAENSNTRRHLTEFNGLDLEMSITD 427

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +   +   ++    +     ++ +  Q            + V E                
Sbjct: 428 HYNEVIQVLHNTFKSIFSGLEERYKDQLDAVRMQYPSTAVRVTE---------------E 472

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P            + AG      D  S      L E +    G +    LDR+P      
Sbjct: 473 PLVVHWEDGIQMLRDAGHEANDFDDLSGAQELALGELVAEKFGSD-FFFLDRFPTQIRPF 531

Query: 249 A-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                P D R++  ++L     E+C+      D        E+             P+  
Sbjct: 532 YTMPCPDDKRYSNSYDLILRGQEICSGAQRCHDADMLMQILEE-------KGVPAEPL-S 583

Query: 308 DFLACLT------------EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           D++                            +R+V L  G +NI +    P  
Sbjct: 584 DYINAFRHGCPPHGGGGVG-----------LERIVFLYLGLDNIRKASMFPRD 625


>gi|316972747|gb|EFV56401.1| asparaginyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 852

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 55/352 (15%), Positives = 123/352 (34%), Gaps = 50/352 (14%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           + D    +R            +  R  +  + R+++ +  + E+   +L  +     + +
Sbjct: 529 HPDVQLEQRHIALRGEHMTKLMRLRAALMKAFRDHYYDRNYCEVTPPTLVQTQVEGGSTL 588

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
            +F       ++  +  YL  S +   +  + +    ++C A ++R  +     H  E+T
Sbjct: 589 FSF-------NYYGQTAYLTQSSQLYLETCIPS-LGDVYCIAMSYRAEKSRTRRHLSEYT 640

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      ++E L++   +I+    +   +  F +     NP  +P      + F R A
Sbjct: 641 HVEAECPFITFENLLERIEDIVCDVVDRVMKSPFGYLVKELNPNFKPP----QKPFRRMA 696

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            ++    L++             ++ G      D   +   R +         +N   +L
Sbjct: 697 YLEAIKWLNDNGVK---------KEDGSEFVVGDDIPEAPERHM------TDTLNEPILL 741

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKK 296
           +R+P    S   N    DP  T+  +L    + E+      + D  E    F+     + 
Sbjct: 742 NRFPKTLKSFYMNPCADDPTLTESVDLLLPGVGEIVGGSMRIWDEKELLDAFK-----RN 796

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            I  E Y     +            G  +G +R +  + G ++I E +  P 
Sbjct: 797 SINVEPYY---WYTEQRKYGTCPHGGYGLGLERFLTWLAGLHHIRETVLYPR 845


>gi|83317631|ref|XP_731245.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23491220|gb|EAA22810.1| asparaginyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 618

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 56/368 (15%), Positives = 111/368 (30%), Gaps = 54/368 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI------R 60
           H R R          ++ +      YF +N +  I++  L  +    G E         +
Sbjct: 263 HLRGRTKLYSSIFRLKSDLIIETFNYFKKNNYTYINTPILTSNDCEGGGELFHVITSPNK 322

Query: 61  AFSTELIIQD--------------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
              TE+  ++                      +KP YL  S + +  + L      +F  
Sbjct: 323 NKKTEIETENINFINEKNNNFDKKNSEKKQFFKKPCYLNVSSQLAL-ECLCCSIGDVFTI 381

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
             ++R        H  EF MLE   A      ++ +    I+        K    + +N 
Sbjct: 382 NQSFRAENSNTSRHLSEFLMLEVELAFSDLNHIILESEKYIKEMINFVLSKSEDIEYINE 441

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +     +            N++               + +  ++      + D      S
Sbjct: 442 HHDQNLKK-----------NLEEILKKPFIIITYEEAIQILKKRNNSNSTNFDFSESDIS 490

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
               + +  N+      I+  YP+           D +     +L   N+       E  
Sbjct: 491 FEDQKYL-ANIYFESPVIIINYPSNIKPFYMKLNDDKKTVSCMDLIFPNVGEIAGGSERE 549

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNI 339
                 +  +++M + K   +   P  E  L         SG  +G DRL+M +   +NI
Sbjct: 550 TN---LNILKEQMIKNKLNIDLYNPYLE--LRK-YGNIPHSGFGLGIDRLIMYILSMSNI 603

Query: 340 NEVIWTPF 347
            +++  P 
Sbjct: 604 RDIVPFPR 611


>gi|149409811|ref|XP_001510627.1| PREDICTED: similar to asparaginyl-tRNA synthetase [Ornithorhynchus
           anatinus]
          Length = 568

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 54/332 (16%), Positives = 107/332 (32%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
               R+ +    RE+F +  + EI   +L      G  T        L   D+  +  +L
Sbjct: 265 IFKARSAVTRCFREHFFDRGYCEITPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 316

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A    +FC A ++R  +     H  E+T +E      +++ ++    
Sbjct: 317 TQSSQLYLETCIPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFDDMLNRLE 375

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +    + NP  +P          R    D    L   D       
Sbjct: 376 DLVCDVVDRVLKSPAASLVYDLNPGFKPPKRPF----KRMNYSDAIVWLKEHDVK----- 426

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 427 ----KEDGTYYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 476

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     ++ I    Y    D       
Sbjct: 477 RLTESVDVLMPNVGEIVGGSMRIWDSEELLKGYK-----REDIDPTPYYWYTD--QRKYG 529

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 530 ACPHGGYGLGLERFLTWILNRYHIRDVCLYPR 561


>gi|297838599|ref|XP_002887181.1| hypothetical protein ARALYDRAFT_894608 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333022|gb|EFH63440.1| hypothetical protein ARALYDRAFT_894608 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 497

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 53/375 (14%), Positives = 110/375 (29%), Gaps = 63/375 (16%)

Query: 3   QIPSQPWWNR----DFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            IP             ++R R          R+ I  +   +  ++    I +  +  S 
Sbjct: 149 PIPKTKLTLEYLRDHTNFRARTTTMAAVTRIRHKICLAAHVFCDKHDICYIHTPIITTSD 208

Query: 53  PGNETHIRAFSTELIIQDHIR------------------KPLYLQTSPEFSCKKLLAAGE 94
                 +   +T +   D +                   +  YL  S +   +    +  
Sbjct: 209 CEGAGEMFQVTTLINQSDKLETGLPRKHGKIDYSQDFFARQAYLTVSGQLHAETYACSM- 267

Query: 95  EKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS 153
             ++ F   ++  +     H  EF M+E   A    E+ M  C++ +     V       
Sbjct: 268 GDVYTFGPTFQAEKSHTSRHLAEFWMVEVELAFAGVEEAMNCCLDDMELMKNV---DEAC 324

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
              +     +  E +T  +A                       L  +A   G +  +   
Sbjct: 325 IHRLQMVALTSFERVTHTKAIT---------------------LLEEAVAKGKKFENQVE 363

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
                +      +   L      I+  YP    A       D      F++    +    
Sbjct: 364 RRMDLASEHERHLTEVLYKKPV-IVYNYPKEIKAFYMRLNDDGETVAAFDVLVPKV---- 418

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVML 332
              EL+   ++  R +  M+  ++         E ++        + SG  +G +R+++ 
Sbjct: 419 --GELIGGSQREERMDVLMKRMEEKGLPIKEY-EWYIDLRRHGTVKHSGFGLGLERMLLF 475

Query: 333 VTGANNINEVIWTPF 347
            TG +NI +VI  P 
Sbjct: 476 ATGMDNIRDVIPFPR 490


>gi|302337560|ref|YP_003802766.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301634745|gb|ADK80172.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 423

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/341 (15%), Positives = 100/341 (29%), Gaps = 40/341 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAFSTELIIQDHI 72
            + + R     ++ I +   EY     F EI S  L  S     T +  F  E     + 
Sbjct: 117 RNPKIRSIFHLQSNILAYFAEYLRSQDFTEIKSSKLIGSGSEGGTGL--FEVE-----YF 169

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQ 131
            + +YL  SP+   + ++A+G E++F    A+R  +     H  E+  L+        +Q
Sbjct: 170 DRKVYLAQSPQLYKQTMVASGMERVFEIGAAYRAEKHDTPRHLNEYVSLDVEMGFIESDQ 229

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            + D    I         +                                      P  
Sbjct: 230 DLMDLETGILKHIFGRIAEYDGSILEQWGASVP----------------SQEALDHIPRI 273

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  + +++ G RV   +   +    +    +E +           +P  +      
Sbjct: 274 SHDEAKAILSERLGKRVFELNPEGER--ELCEWALEKHGVELVFVNA--FPRKKRPFYTY 329

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              D   T  F+L    +E+ +    + +              K+   +        +L 
Sbjct: 330 --PDGMKTMSFDLLFRGLEITSGSRRINEYDMLVE------NIKRFGLDPAGL--AGYLE 379

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                 P   G A+G +R    V G ++I E    P  +  
Sbjct: 380 VFKYGAPPHGGFAIGLERFTQKVLGLSSIKEASLFPRDRKR 420


>gi|4758762|ref|NP_004530.1| asparaginyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|3915059|sp|O43776|SYNC_HUMAN RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|2764505|emb|CAA04008.1| asparaginyl-tRNA synthetase [Homo sapiens]
 gi|3894218|dbj|BAA34600.1| Asparaginyl tRNA Synthetase [Homo sapiens]
 gi|12804549|gb|AAH01687.1| Asparaginyl-tRNA synthetase [Homo sapiens]
 gi|119583452|gb|EAW63048.1| asparaginyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|261859390|dbj|BAI46217.1| asparaginyl-tRNA synthetase [synthetic construct]
          Length = 548

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 107/332 (32%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+M+    R++F +  + E+   +L      G  T        L   D+  +  +L
Sbjct: 245 ILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 296

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E      +++ L+    
Sbjct: 297 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLE 355

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +          NP  +P          R    D    L   D       
Sbjct: 356 DLVCDVVDRILKSPAGSIVHELNPNFQPPKRPF----KRMNYSDAIVWLKEHDVK----- 406

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 407 ----KEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 456

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     ++ I    Y    D       
Sbjct: 457 RLTESVDVLMPNVGEIVGGSMRIFDSEEILAGYK-----REGIDPTPYYWYTD--QRKYG 509

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 510 TCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 541


>gi|119583453|gb|EAW63049.1| asparaginyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
          Length = 547

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 107/332 (32%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+M+    R++F +  + E+   +L      G  T        L   D+  +  +L
Sbjct: 244 ILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 295

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E      +++ L+    
Sbjct: 296 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLE 354

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +          NP  +P          R    D    L   D       
Sbjct: 355 DLVCDVVDRILKSPAGSIVHELNPNFQPPKRPF----KRMNYSDAIVWLKEHDVK----- 405

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 406 ----KEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 455

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     ++ I    Y    D       
Sbjct: 456 RLTESVDVLMPNVGEIVGGSMRIFDSEEILAGYK-----REGIDPTPYYWYTD--QRKYG 508

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 509 TCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 540


>gi|159470225|ref|XP_001693260.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158277518|gb|EDP03286.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 535

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 83/286 (29%), Gaps = 18/286 (6%)

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           T    +D   KP +L  S +   +    A    I+ F   +R        H  EF M+E 
Sbjct: 259 TPDYKEDFFSKPAFLTVSGQLQGEFYACA-LSNIYTFGPTFRAEYSFTARHLAEFWMIEP 317

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    +  M+   + +R   +   +                  +    A AR   +  
Sbjct: 318 EMAFCDLKDDMQCAEDYVRYCCKFLLENCKPDLEF-------INKMVDNTALARLEQVAS 370

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                        LL     +          W    S      +   +      I+  YP
Sbjct: 371 TPFKRISYTEAIDLLLGVVAEGKKSFEFKVEWGIDLSTEHERYLTEEIFKQPV-IVYNYP 429

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
               A       D +     ++    +       +  D ++   R     +  +   +  
Sbjct: 430 KEIKAFYMRLNDDNKTVAAMDVLVPKVGELIGGSQREDRLDVLER-----RLGESGMDLA 484

Query: 303 YPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               E +L          SG  +GF+RL++  TG +NI EVI  P 
Sbjct: 485 AY--EGYLDLRRYGTVPHSGFGLGFERLILFATGLDNIREVIPFPR 528


>gi|296815388|ref|XP_002848031.1| asparaginyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238841056|gb|EEQ30718.1| asparaginyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 580

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 103/335 (30%), Gaps = 45/335 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHIRKPLYLQ 79
            L  R  +  + R+ F + Q +E+   ++  +     + +  F       ++  +  YL 
Sbjct: 276 VLKVRAAVVRAFRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEF-------NYYGEKAYLT 328

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S +   +  L A    +FC   ++R  +     H  E+T +E      ++  L+     
Sbjct: 329 QSSQLYLETCL-ASLGDVFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEE 387

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           II    +++                         AF +  N D         +       
Sbjct: 388 IICSVIDISLAD------------------PQIAAFVKQLNPDFQPPARPFRRMRYSEAI 429

Query: 199 LQAQQAGI--RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP-AD 255
               + GI        ++ D  +     K+     IN   +L  +PA   A        D
Sbjct: 430 EWLTEHGINNEEGKPHSFGDDIAEAAERKM--TDIINKPILLTHFPAEIKAFYMKKDAED 487

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLAC 312
           PR T+  ++    +         +D  +     E     KK+  + T      D+     
Sbjct: 488 PRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMGAYKKEGMDPTPYYWYTDQR---- 538

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                   G  +G +R +  + G   + E    P 
Sbjct: 539 KYGTSPHGGYGIGLERFLAWMCGRYTVRECSLYPR 573


>gi|294656044|ref|XP_002770214.1| DEHA2C13750p [Debaryomyces hansenii CBS767]
 gi|199430811|emb|CAR65577.1| DEHA2C13750p [Debaryomyces hansenii]
          Length = 508

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 111/365 (30%), Gaps = 25/365 (6%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           +  +P+     R         L  R+ +++ L E+F    F +  +  L  S   E    
Sbjct: 146 LRGLPT----LRHRTASLASMLRFRSFMETKLMEFFNSQNFTKT-TPPLITSSDCEGAGE 200

Query: 61  AFSTE------------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
            F  E            +  +    KP +L  S +    ++L     + +     +R  +
Sbjct: 201 QFKVEQLHKKEVVVDGAVQEEHFFGKPAFLTVSTQLHL-EVLTLSLNRAWTLTPCFRAED 259

Query: 109 Q-GCLHQPEFTMLEWYRAHESYE-QLMKDCMNIIRCAAEVANQKIFSFQ---NVNCNPFS 163
                H  EF MLE    +  +  QL     ++IR        +  + Q   +      S
Sbjct: 260 SNTNRHLSEFWMLEAEICYIDHVSQLTDFTEDMIRYVTGALKSEAINEQSSGHSTDLLSS 319

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             +   +     R+  I +             +  +   +   +  +  TW D       
Sbjct: 320 RFKKEELETLKNRWETI-MAPQKWPSVTYSEAIDIINKVKNKNKSKNRLTWGDDIQTEHE 378

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           + +           +  YP  +            +       AC   +     EL+    
Sbjct: 379 KWLAGTH-FQSPVFITDYPRSQKPFYMPKSHSSVYNPERPTVACYDLILPEIGELVGGSM 437

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           + H +E  +QE  +       +D      L       G  MGF+RL+  +    N+ +VI
Sbjct: 438 REHDYENLVQEMTRRNMNLKEMDWYLSTRLNGTVPHGGFGMGFERLLSYIGAMENVKDVI 497

Query: 344 WTPFS 348
             P  
Sbjct: 498 PFPRV 502


>gi|73945455|ref|XP_849060.1| PREDICTED: similar to Asparaginyl-tRNA synthetase, cytoplasmic
           (Asparagine--tRNA ligase) (AsnRS) isoform 1 [Canis
           familiaris]
          Length = 559

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 109/332 (32%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+++    R++F +  + E+   +L      G  T        L   D+  +  +L
Sbjct: 256 ILKARSVVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 307

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A    +FC A ++R  +     H  E+T +E      ++E+L+    
Sbjct: 308 TQSSQLYLETCIPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNRLE 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +        + NP  +P                    ++  D       
Sbjct: 367 DLVCDVVDRVLKSPAGSIVRDLNPNFKPPKRPF-------------KRMNYSDAIVWLKE 413

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 414 HNIKKEDGTFYEFGEDIPEAPERLM------TDSINEPILLCRFPVEIKSFYMQRCPEDS 467

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     ++ I    Y    D       
Sbjct: 468 RLTESVDVLMPNVGEIVGGSMRIWDSEEILAGYK-----REGIDPTPYYWYTD--QRKYG 520

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 521 TCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 552


>gi|19922416|ref|NP_611176.1| CG6796 [Drosophila melanogaster]
 gi|7302847|gb|AAF57921.1| CG6796 [Drosophila melanogaster]
 gi|17945309|gb|AAL48711.1| RE15573p [Drosophila melanogaster]
 gi|220948064|gb|ACL86575.1| CG6796-PA [synthetic construct]
 gi|220957268|gb|ACL91177.1| CG6796-PA [synthetic construct]
          Length = 460

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/362 (16%), Positives = 115/362 (31%), Gaps = 59/362 (16%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R       +  R+  Q ++ +Y  +  F++I++  L  +          F  + 
Sbjct: 124 HLHLRSRVDFVAAQMRVRHKAQKAIHDYMDDQDFVQINTPLLTTNDCEGAGE--VFRVQP 181

Query: 67  IIQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
             QD               +    ++L  S +    + +  G  K +  + A+R      
Sbjct: 182 DSQDLLKQMNRPNIPMEQSYFDSKVFLSVSGQLHL-EAMTYGLGKTYTLSPAFRAENSKS 240

Query: 111 CLHQPEFTMLEWYRAH-ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
            LH  EF M E   AH E  E+L +    +++       +      +      +    + 
Sbjct: 241 PLHLAEFYMFEAELAHLEEMEKLAQFIEQMLKSVTNRLLETSGEDLSFCQRNSNSNSDLP 300

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +   +  + D                    Q+    +    + ++ FS+     +  +
Sbjct: 301 WLQVPWKIMSYD--------------EALQVLQENKDSLKTPISLNEGFSKDQELFLVAH 346

Query: 230 LGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHR 287
            G      +  +PA +         ++P      +L    + ELC       DP   +  
Sbjct: 347 CG--APVFVVDWPAQQKPFYMKVSRSNPNRVHALDLLMPAVGELCGGSLRESDPAILKSH 404

Query: 288 FEKEMQEKKKIYNETYPID-EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                           P D E ++         + G  MGF+R + LVTG  NI +VI  
Sbjct: 405 -------------PHLPKDLEWYVDLRKYGGVPTGGFGMGFERYLQLVTGVKNIRDVIPF 451

Query: 346 PF 347
           P 
Sbjct: 452 PR 453


>gi|303310901|ref|XP_003065462.1| Aspartyl-tRNA synthetase, cytoplasmic , putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240105124|gb|EER23317.1| Aspartyl-tRNA synthetase, cytoplasmic , putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320034649|gb|EFW16592.1| aspartyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 562

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 93/326 (28%), Gaps = 24/326 (7%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           + +     E+ +++    I +  L  +   E     F        + ++  YL  SP+  
Sbjct: 252 SGVAQLFAEFMLKSGARWIFTSKLSGAA-TEGGADVFE-----LGYFKRKAYLSQSPQLG 305

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
            +  +A     +F     +R  E     H  EF  L++ R    +   +      +    
Sbjct: 306 KQMCIAGDMMNVFEIGPVFRAEESNTHRHLTEFIGLDFERTFHRHYHEVLSFAEELLVFI 365

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
               +  +  Q                    +   +     +    +    +   +  + 
Sbjct: 366 LSELKTRYKDQIEVIQKSYPKAGDFRLPKDGKALRLKYMDGIALLKEAGVDVSEQERFEN 425

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFE 263
            +  A +     I                   +LD++P+          P DP F+  ++
Sbjct: 426 DLTTAMEKQLGRIIREKYD---------TDFYVLDKFPSAVRPFYTKACPEDPTFSNSYD 476

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
            +    E+ +    +    E       E     +  +      ED+L          +G 
Sbjct: 477 FFMRGEEIMSGAQRINVAEEL------EAAMIARGVDPKAEGFEDYLGAFRQGCAPHAGG 530

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFS 348
            +G +R+VM   G  NI      P  
Sbjct: 531 GLGLNRIVMFFLGLPNIRLATLFPRD 556


>gi|218507800|ref|ZP_03505678.1| lysyl-tRNA synthetase protein [Rhizobium etli Brasil 5]
          Length = 128

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 73/122 (59%), Positives = 88/122 (72%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE 65
           + PWW    H  RRPFL+ RN IQ++LR +F    FIE+D+  LQ SPGNE H+ AF+TE
Sbjct: 7   ASPWWTPSVHADRRPFLIGRNAIQAALRGFFAREDFIEVDTAVLQVSPGNEAHLHAFATE 66

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
            +  D    P YL TSPEF+CKKLLAAGE++I CFAH +RN E+G LH PEFTMLEWYRA
Sbjct: 67  ALTTDGQMAPFYLHTSPEFACKKLLAAGEQRISCFAHVYRNRERGPLHHPEFTMLEWYRA 126

Query: 126 HE 127
            E
Sbjct: 127 GE 128


>gi|238883499|gb|EEQ47137.1| asparaginyl-tRNA synthetase [Candida albicans WO-1]
          Length = 552

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 104/357 (29%), Gaps = 59/357 (16%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           + +    +R            +  R    +++R +F E    E+    +      G  T 
Sbjct: 228 DPNLLLDQRHLALRGETLSAVMKVRAAYSAAIRRFFAEEGLTEVTPPCMVQNQVEGGST- 286

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   D+  +  YL  S +   +  L A    ++C   ++R  +     H  E+
Sbjct: 287 -------LFKLDYYGEEAYLTQSSQLYLETCL-ASLGDVYCIQESFRAEKSHTRRHLSEY 338

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++E L+     ++    +   +   +                      + 
Sbjct: 339 THIEAELVFITFEDLLTHLEKLLSKTIQYVLEDPVAG------------------PIVKQ 380

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCC 235
            N D         + +         + GI     + +   D  +     K+     IN  
Sbjct: 381 LNPDFKAPKAPFKRMEYIEALDWLNEHGIPNEDGEKFKFGDDIAEAAERKMTDT--INEP 438

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            +L R+PA   S        DPR T+  ++   N+         +D  +         + 
Sbjct: 439 ILLTRFPAEIKSFYMQRCKDDPRVTESVDVLMPNVGEITGGSMRIDNYD---------EL 489

Query: 295 KKKIYNETYPIDEDF----LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +  E   +D  +    +          G  +G +R +  +     + +    P 
Sbjct: 490 MAALKRENLNLDSYYWFTDVRK-YGSAPHGGYGIGLERQLAYMLNRYTVRDCSLYPR 545


>gi|241957629|ref|XP_002421534.1| asparagine--tRNA ligase, putative; asparaginyl-tRNA synthetase,
           cytoplasmic, putative [Candida dubliniensis CD36]
 gi|223644878|emb|CAX40876.1| asparagine--tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 552

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 104/357 (29%), Gaps = 59/357 (16%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           + +    +R            +  R    +++R +F E    E+    +      G  T 
Sbjct: 228 DPNLLLDQRHLALRGESLSAVMKVRAAYSAAIRRFFAEEGLTEVTPPCMVQNQVEGGST- 286

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   D+  +  YL  S +   +  L A    ++C   ++R  +     H  E+
Sbjct: 287 -------LFKLDYYGEEAYLTQSSQLYLETCL-ASLGDVYCIQESFRAEKSHTRRHLSEY 338

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++E L+     ++    +   +   +                      + 
Sbjct: 339 THIEAELVFITFEDLLTHLEKLLSKTIQYVLEDPVAG------------------PIVKQ 380

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCC 235
            N D         + +         + GI     + +   D  +     K+     IN  
Sbjct: 381 LNPDFKAPKAPFKRMEYIEALDWLNEHGIPNEDGEKFKFGDDIAEAAERKMTDT--INEP 438

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            +L R+PA   S        DPR T+  ++   N+         +D  +         + 
Sbjct: 439 ILLTRFPAEIKSFYMQRCKDDPRVTESVDVLMPNVGEITGGSMRIDNYD---------EL 489

Query: 295 KKKIYNETYPIDEDF----LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +  E   +D  +    +          G  +G +R +  +     + +    P 
Sbjct: 490 MAALKRENLNLDSYYWFTDVRK-YGSAPHGGYGIGLERQLAYMLNRYTVRDCSLYPR 545


>gi|296222717|ref|XP_002757320.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Callithrix
           jacchus]
          Length = 548

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/332 (17%), Positives = 108/332 (32%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
               R+MI    R++F +  + EI   +L      G  T        L   D+  +  +L
Sbjct: 245 IFRARSMITRCFRDHFFDRGYCEIAPPTLVQTQVEGGST--------LFKLDYFGEEAFL 296

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E      S+E L+    
Sbjct: 297 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLSFEDLLNRLE 355

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +      NP  +P                    ++  D       
Sbjct: 356 DLVCDVVDRVLKSPVASIVHELNPNFKPPKRPF-------------KRMNYSDAIVWLKE 402

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      +   +   R++         IN   +L R+P    S      P DP
Sbjct: 403 HDIKKEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDP 456

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     ++ I    Y    D       
Sbjct: 457 RLTESVDVLMPNVGEIVGGSMRIWDNEEILAGYK-----REGIDPTPYYWYTD--QRKYG 509

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 510 TCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 541


>gi|332373956|gb|AEE62119.1| unknown [Dendroctonus ponderosae]
          Length = 461

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 100/354 (28%), Gaps = 53/354 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFSTEL 66
           H R R       L  R+    ++  Y  +N +I I +  +  +      ET       E 
Sbjct: 133 HLRPRTKTFASVLRLRHAAYLAIHNYLHQNHYINIHTPIITANDCEGAGETFKVVPDNEQ 192

Query: 67  IIQD-----------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQ 114
           ++++           +     YL  S +    +  A    K++CF   +R        H 
Sbjct: 193 LLKNMAKKDVPFDNAYFDTKAYLTVSGQLHL-EAAAHALNKVYCFGPTFRAENSISRFHL 251

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF MLE  +A                       +K+      +    +  +  T ++  
Sbjct: 252 SEFYMLELEQAF-----------LDDLDDLLDVVEKMIKHVTADLLEHNFSDLETCSQQK 300

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             Y+ ID        ++    +     +    +          F++     +    G   
Sbjct: 301 IEYSWIDKEFKRIPHEEALDIVTNKLNKTVSSKTG--------FTKGDEVALTHYFGHVP 352

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  +P  E         D +      L     E+                     + 
Sbjct: 353 V-FIINWPKEEKPFYMKQINDDQVAAFDLLAPSVGEIVGGSLRENSYE----------KL 401

Query: 295 KKKIYNETYPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           K +I      +D    L        + G  MGF+R + LV G   I + I  P 
Sbjct: 402 KAQIPESNSQLDWYLDLRRF-GSVPTGGFGMGFERYLQLVLGVQTIKDCIPFPR 454


>gi|77460632|ref|YP_350139.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|97196812|sp|Q3K7V6|SYD_PSEPF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77384635|gb|ABA76148.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 591

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 71/444 (15%), Positives = 125/444 (28%), Gaps = 105/444 (23%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNE----- 56
           +   R R            L  R+ + +S+R Y  EN F+++++  L   +P        
Sbjct: 122 ETRLRYRFLDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYLV 181

Query: 57  ---THIRAFSTELIIQDHIRK-------PLYLQTS-------------PEFSCKKLLAAG 93
              TH  +F          ++         Y Q +             PEF+   +  + 
Sbjct: 182 PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSF 241

Query: 94  EEKIFCFA------HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
            ++                         EF  + +  A   Y     D  N +       
Sbjct: 242 LDEKDIMGLTEGMIRNLFKEVLDLE-FGEFPHMTFEEAMRRYGSDKPDLRNPLELVDVAD 300

Query: 148 NQKIFSFQNVNCNPFSEPEYI-------------TVAEAFARYANIDLGTTLDNPDQPDR 194
             K   F+  +         I                + + ++  I     L      +R
Sbjct: 301 QLKEVDFKVFSGPANDPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNER 360

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFS----------------------------------- 219
                  Q   ++   +   + I                                     
Sbjct: 361 AAGVEGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHDL 420

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN------IELCN 273
           ++L  +  P   ++     +      SAL + + A     +  E             + N
Sbjct: 421 KLLTCEWAPMWVVDFPMFEENDDGSFSALHHPFTAPKCSPEELEANPAGALSRAYDMVLN 480

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQSSGIAMGFDRL 329
              EL     + HR E +    + +       +E F   L  L    P   G+A G DRL
Sbjct: 481 G-TELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAFGLDRL 539

Query: 330 VMLVTGANNINEVIWTPFSQSNQE 353
           VML+TGA +I EVI  P +QS  +
Sbjct: 540 VMLMTGAQSIREVIAFPKTQSAAD 563


>gi|311244570|ref|XP_003121503.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Sus
           scrofa]
          Length = 559

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 108/332 (32%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R++I    RE+F +  + E+   +L      G  T        L   D+  +  YL
Sbjct: 256 ILKARSVITRCFREHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAYL 307

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A    +FC A ++R  +     H  E+T +E      ++E+L+    
Sbjct: 308 TQSSQLYLETCIPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNRLE 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    E   +   +      NP  +P                        D       
Sbjct: 367 DLVCDVVERVMKSSAAGIVRELNPNFKPPKRPFRRMN-------------YSDAIVWLKE 413

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 414 HNIKKEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 467

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     +++I    Y    D       
Sbjct: 468 RLTESVDVLMPNVGEIVGGSMRIWDNEELLAGYK-----REEIDPTPYYWYTD--QRKYG 520

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 521 TCPHGGYGLGLERFLTWILDRYHIRDVCLYPR 552


>gi|303310747|ref|XP_003065385.1| asparaginyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240105047|gb|EER23240.1| asparaginyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320034745|gb|EFW16688.1| asparaginyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 529

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 115/391 (29%), Gaps = 54/391 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS 52
           +  IP         H R R          R+         F       FI++    +  S
Sbjct: 142 LRTIP---------HLRFRTPFNSLLSRFRSECIYQATNVFHSRPGLNFIQVQPPLITSS 192

Query: 53  ---PGNETHI---RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
                 E      R  + E   +++ R P YL  S +   +   AA    ++  +  +R 
Sbjct: 193 DCEGAGEVFRVSPREAAAEGEDEEYFRAPKYLTVSSQLHLEAY-AADLGNVWTLSPTFRA 251

Query: 107 GEQG-CLHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
            +     H  EF MLE         ++L K   + IR   E       + +        E
Sbjct: 252 EKSDTPRHLSEFYMLEAELNFVNDLDELTKFVESFIRELTEKLYNTPVARELFTAKRSGE 311

Query: 165 PEY-ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA--QQAGIRVAHDDTWSDIFSRI 221
               +  +E   R+  +    T       +   L   A  +   +      +W       
Sbjct: 312 SGRTVVNSEVTERWKGLMGAATWPRITYTEAIELLQNASMKSDKVEFKSCPSWPAGIQVE 371

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALAN------IYPADPRFTKRFELYACNI-ELCNA 274
             + +   +G      +  YP                  +      F+L    + E+   
Sbjct: 372 HEKHLVSTVGNGAPIFITDYPKALKPFYMAPSATQSTDPEKETVACFDLIMPKVCEVVGG 431

Query: 275 CDELL--DPIEQRHRFEKEMQEK------KKIYNETYPI---DEDF-----LACLT--EM 316
                  + + Q  R  + ++ +          + TYP    DE+       A L     
Sbjct: 432 SLREHRLENLIQNMREHEMLRARRNEGSSAASDDMTYPFLRPDENLGSLRWYADLRRWGS 491

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               G  +GFDR +  +TG  +I +V+  P 
Sbjct: 492 APHGGFGLGFDRFLSYLTGVGSIRDVVPFPR 522


>gi|254565875|ref|XP_002490048.1| Cytosolic asparaginyl-tRNA synthetase, required for protein
           synthesis [Pichia pastoris GS115]
 gi|238029844|emb|CAY67767.1| Cytosolic asparaginyl-tRNA synthetase, required for protein
           synthesis [Pichia pastoris GS115]
 gi|328350452|emb|CCA36852.1| asparaginyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 551

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 108/354 (30%), Gaps = 53/354 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            L  R  +  ++R  + E   IE+    +      G  T 
Sbjct: 227 DPSLLLDQRHLAIRGETLSAVLKVRASLLQAIRRVYDEEGVIEVTPPCMVQTQVEGGST- 285

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L    +  +  YL  S +   +  L A    ++C   ++R  +     H  E+
Sbjct: 286 -------LFKLQYYGEEAYLTQSSQLYLETALPA-LGDVYCIQESFRAEKSHTRRHLSEY 337

Query: 118 TMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           T +E   A  ++E L+     +I +    V N  +        NP      +       R
Sbjct: 338 THIEAELAFLTFEDLLSHIERVITKTVKYVVNDPVAGPLVKQLNPGFAAPELPF----KR 393

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
              ++    L++   P+                    + D  +     K+   +G+    
Sbjct: 394 MEYVEALKWLNDHSIPNEE-------------GQPFKFGDDIAEAAERKMTDTIGV--PI 438

Query: 237 ILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDP-IEQRHRFEKEMQE 294
           +L R+P    S        DPR T+  ++    +         +D   E    FE     
Sbjct: 439 LLTRFPLEIKSFYMKRCADDPRVTESVDVLMPTVGEITGGSMRIDSLNELLEGFE----- 493

Query: 295 KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++K+    Y     F+           G  +G +R++  +     + +    P 
Sbjct: 494 REKLDKSAYY---WFIDQRKYGTCPHGGYGLGTERILAWLCDRFTVKDCSLYPR 544


>gi|161833768|ref|YP_001597964.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
 gi|152206258|gb|ABS30568.1| asparaginyl-tRNA synthetase [Candidatus Sulcia muelleri GWSS]
          Length = 460

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/365 (14%), Positives = 110/365 (30%), Gaps = 40/365 (10%)

Query: 1   MHQIPSQPWWNRD-FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPG 54
           +          R+  + R R       +  R+ I  S+ ++F + +F  I++  +  +  
Sbjct: 111 LQPKEHSFKKLREQAYLRFRTTIFSSIMRIRHNISFSIHKFFYKKKFYYINTPIIT-TYD 169

Query: 55  NETHIRAFSTELIIQ---------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
            E     F                D      YL  S +    +  A+G  KI+ F   +R
Sbjct: 170 TEGAGDMFRVTNFKNNNNNNNNNLDFFGASTYLTVSGQL-QGEAAASGLGKIYTFGPTFR 228

Query: 106 NGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
             +     H  EF M+E   +      +M      ++   +   +  +          + 
Sbjct: 229 AEKSNTFRHLSEFWMIEPEISFYELNNIMSLAEEFLKFIIKYVIKHCYEDLYFLEKKKNI 288

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            + +        Y+ +D      +     + L +       ++  +   W         +
Sbjct: 289 FKIL--------YSILDFPFEKISYTNAIKILKF----SKNVKFIYPVIWGADLQSEHEK 336

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIE 283
            +  +   N   I+  YP            D +     ++    I E+            
Sbjct: 337 FLSEHYFNNRPIIIFNYPLKIKPFYMRLNNDNKTVAAMDIIFPYIGEIIGGSQREERYNV 396

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
              R  +   + K +          +L          SG  +GF+RL+  +T  +NI +V
Sbjct: 397 LLKRMIESNLDTKSL--------WWYLNIRRFGSVPHSGFGLGFERLIQFITNISNIKDV 448

Query: 343 IWTPF 347
           I  P 
Sbjct: 449 IPFPR 453


>gi|121715316|ref|XP_001275267.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           clavatus NRRL 1]
 gi|119403424|gb|EAW13841.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           clavatus NRRL 1]
          Length = 574

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 105/354 (29%), Gaps = 53/354 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +    Y  R            L  R     + R+ F E++ +E+   ++      G  T 
Sbjct: 250 DPQTLYDNRHLVLRGETSSAVLKVRAATLKAFRQTFEEHRMLEVTPPAMVQTQVEGGST- 308

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   D+  +  YL  S +   +  L +    +FC   ++R  +     H  E+
Sbjct: 309 -------LFKFDYYGEDAYLTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEY 360

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++  L+    N+I    E+      +   +       P++ T +  F R 
Sbjct: 361 THIEGELDFITFTDLLDHLENVICRVIELTLADPATAALIKQLN---PDFKTPSRPFRRM 417

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
              D    L   D P+                    + D  +     K+     IN    
Sbjct: 418 RYSDAIEWLREHDIPNEE-------------GKPHQFGDDIAEAAERKM--TDIINQPIF 462

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           L  +PA   +      P D R T+  ++    +         +D  +     E     K 
Sbjct: 463 LTHFPAEIKAFYMKKDPEDRRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMAAYKH 517

Query: 297 KIYNETYPI---DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  +        D+             G  +G +R +  +     + +    P 
Sbjct: 518 EGMDPAPYYWYTDQR----KYGTSPHGGYGLGLERFLAWLCARYTVRDCSLYPR 567


>gi|170029945|ref|XP_001842851.1| asparaginyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167865311|gb|EDS28694.1| asparaginyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 436

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/355 (12%), Positives = 102/355 (28%), Gaps = 47/355 (13%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R +       L  R+       +Y     FI+I +  +  +          F    
Sbjct: 102 HLHLRPQVSSVGSTLRVRHQATKCFNDYLDREGFIQIHTPIITSNDCEGAGEA--FQVRP 159

Query: 67  IIQDHIRKPL----------YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
                +++            +L  S +    + +A G  K++ F   +R       +H  
Sbjct: 160 ANDGLLKQMAKKGGPARPGTFLTVSGQLHL-EAMAHGLGKVYTFGPTFRAENSKSPIHLA 218

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF MLE   A       +    + I    +   + +    + + +   +    +  E   
Sbjct: 219 EFHMLELEEAFMD---SLDALADRIESMVKCVTKSLLENSSEDLSSVRKLTTDSNLEQS- 274

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
            +  +D        D           QQ   ++      ++  ++     +  +      
Sbjct: 275 -FTWVDKQFPRITFDDA-----MQVLQQHKTKLKSPVCPAEGINKEQELFLVDHFAS--P 326

Query: 236 TILDRYPAPESALANI-YPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQ 293
             +  +P    +       A+P      + L     EL        D  +   +      
Sbjct: 327 LFVTSWPKAIKSFYMKENAANPELVDALDFLVPHAGELVGGSVREGDHDKLAAKLPD--- 383

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++ +          +L         ++G  +G +R +  V   +N+ +VI  P 
Sbjct: 384 -REALG--------WYLELRKFGSVPTAGFGLGLERYLAWVLNVHNVKDVIPFPR 429


>gi|226293889|gb|EEH49309.1| asparaginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 597

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/353 (13%), Positives = 104/353 (29%), Gaps = 51/353 (14%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +    Y  R            +  R     + R+ F E   +E+   ++  +     + +
Sbjct: 210 DPHTLYDNRHLVLRGETSSSVMKVRAATLRAFRKAFEEKGMLEVTPPAMVQTQVEGGSTL 269

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
             F       D+  +  YL  S +   +  L +    +FC   ++R  +     H  E+T
Sbjct: 270 FEF-------DYYGEKAYLTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEYT 321

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      S+  L+    ++I    ++   +    Q V     +        +      
Sbjct: 322 HVEAELDFISFTDLLDHLEDMICRVIDLVLSEPLIAQYVKNLNPTFTLPPRPFKRMKYAE 381

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            I+     + P++                      + D  +     K+     ++    L
Sbjct: 382 AIEWLVEHNIPNEE----------------GQPHRFGDDIAEAAERKM--TDMLSRPIFL 423

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
             +P    +      P DPR T+  ++    +         +D  +     E     K++
Sbjct: 424 THFPTEIKAFYMKKDPDDPRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMAAYKRE 478

Query: 298 IYNETYPI---DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + +      D+             G  +G +R +  + G   + E    P 
Sbjct: 479 GMDPSPYYWYTDQR----KYGTSPHGGYGLGLERFLAWMCGRYTVRECCLYPR 527


>gi|226293463|gb|EEH48883.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 541

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/325 (13%), Positives = 94/325 (28%), Gaps = 40/325 (12%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           + +     EY +++    I +  L  +  +E     F        + ++  YL  SP+  
Sbjct: 249 SGVAQLFTEYMLKSGSRWISTPKLTANA-SEGGAGVFEVT-----YFKRKAYLAQSPQLY 302

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            +  +A     +F                 EF  L++ +  +S+   +      +     
Sbjct: 303 KQMCIAGDMGSVF-----------------EFIGLDFEKTFQSHYHEVLSFAEDLLVFIL 345

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
              +K F  +                    +   +     +    +    +   +  +  
Sbjct: 346 SELKKRFKKEIEVVQRSYPKAGDFRLPKDGKALRLKYMDGVALLKEAGVDVSEQEKFEND 405

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFEL 264
           +  A +     I                   +LD++P           P DP F+  ++ 
Sbjct: 406 LTTAMEKQLGRIIREKYD---------TDFYVLDKFPMAVRPFYTKACPQDPTFSNSYDF 456

Query: 265 YACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIA 323
           +    E+ +    + D  E       E     K  +      ED++       P  +G  
Sbjct: 457 FMRGEEIMSGAQRINDAKEL------EAAMVSKGLDPNDEGFEDYIGAFRQGCPPHAGGG 510

Query: 324 MGFDRLVMLVTGANNINEVIWTPFS 348
           +G +R+VM   G  NI      P  
Sbjct: 511 LGLNRIVMFFLGLPNIRLATLFPRD 535


>gi|195335103|ref|XP_002034215.1| GM21746 [Drosophila sechellia]
 gi|194126185|gb|EDW48228.1| GM21746 [Drosophila sechellia]
          Length = 460

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/362 (16%), Positives = 113/362 (31%), Gaps = 59/362 (16%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R       +  R+  Q ++ +Y  E  F++I++  L  +          F  + 
Sbjct: 124 HLHLRSRVDFVAAQMRVRHKAQKAIHDYMDEQDFVQINTPLLTTNDCEGAGE--VFRVQP 181

Query: 67  IIQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
             QD               +    ++L  S +    + +  G  K +  + A+R      
Sbjct: 182 DSQDLLKQMNRPNVPMEQSYFDSKVFLSVSGQLHL-EAMTYGLGKTYTLSPAFRAENSKS 240

Query: 111 CLHQPEFTMLEWYRAH-ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
            LH  EF M E   AH E  E+L +    +++       +      +      +    + 
Sbjct: 241 PLHLAEFYMFEAELAHLEELEKLARFIEQMLKSVTSRLLETSGEDLSFCQRNSNSNSDLP 300

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +   +  + D                    Q+    +    + ++ FS+     +  +
Sbjct: 301 WLQVPWKIMSYD--------------EALQVLQENKGSLKTPISLNEGFSKDQELFLVAH 346

Query: 230 LGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHR 287
            G      +  +P  +          +P      +L    + ELC       DP   +  
Sbjct: 347 CG--APVFVVDWPVQQKPFYMKVSRTNPNRVHALDLLMPAVGELCGGSLRESDPAILKSH 404

Query: 288 FEKEMQEKKKIYNETYPID-EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                           P D E ++         + G  MGF+R + LVTG  NI +VI  
Sbjct: 405 -------------PQLPKDLEWYVDLRKYGGVPTGGFGMGFERYLQLVTGVKNIRDVIPF 451

Query: 346 PF 347
           P 
Sbjct: 452 PR 453


>gi|255720298|ref|XP_002556429.1| KLTH0H13024p [Lachancea thermotolerans]
 gi|238942395|emb|CAR30567.1| KLTH0H13024p [Lachancea thermotolerans]
          Length = 554

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 103/356 (28%), Gaps = 57/356 (16%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            +  R  +  ++R ++ E    E+++  +      G  T 
Sbjct: 230 DPSLLLDQRHLALRGETLSGVMKVRAALLRAVRRFYYEEGLTEVNTPCMVQTQVEGGST- 288

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L    +  +  YL  S +   +  L A    ++C   ++R  +     H  E+
Sbjct: 289 -------LFNLGYYGEEAYLTQSSQLYLETCL-ASLGDVYCIQESFRAEKSHTRRHLSEY 340

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      +++ L+     +I  A     +   +                        
Sbjct: 341 THIEAELCFLTFDDLLVHIEKLITTAVRYVLEDPVAG------------------PLVEQ 382

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCC 235
            N           + D         + GI+     D  + D  +     K+   +G+   
Sbjct: 383 LNPGFKAPTMPFMRLDYRDAIKWLNEHGIKNEEGEDFKFGDDIAEAAERKMTDTIGV--P 440

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             L R+P    S        D   T+  ++   N+         +D ++     E     
Sbjct: 441 IFLIRFPVEIKSFYMKRCADDANVTESVDVLMPNVGEITGGSMRIDAMD-----ELMAGF 495

Query: 295 KKKI---YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           K++        + ID+             G  +G +R++  +     + +    P 
Sbjct: 496 KREGIATDPYYWFIDQR----KYGSCPHGGYGIGTERILAWLCDRFTVRDCSLYPR 547


>gi|302308063|ref|NP_984841.2| AEL020Wp [Ashbya gossypii ATCC 10895]
 gi|299789278|gb|AAS52665.2| AEL020Wp [Ashbya gossypii ATCC 10895]
          Length = 551

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 103/355 (29%), Gaps = 55/355 (15%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +       R            +  R     ++R  + +   +E+    +      G  T 
Sbjct: 227 DPSLLMDMRHLMLRGESLSAVMKVRAAFLRAIRRVYEDEGLLEVTPPCMVQTQVEGGST- 285

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   D+  +  +L  S +   +  L A    +FC   ++R  +     H  E+
Sbjct: 286 -------LFKLDYYGEEAFLTQSSQLYLETCLPA-LGDVFCIQESFRAEKSHTRRHLSEY 337

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E       ++QL++    +I        +   +                      + 
Sbjct: 338 THIEAELGFVDFDQLLRHTERVITSLVRYVLEDPVAG------------------PLVKQ 379

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD--TWSDIFSRILIEKIEPNLGINCC 235
            N D         + +         + GI+    +   + D  +     K+   +G    
Sbjct: 380 LNPDFVPPQMPFMRLEYKDAITWLNEHGIKNEEGEEFKFGDDIAEAAERKMTDTIG--KP 437

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ- 293
             L R+P    S        DPR T+ F++    +         +D        ++ M  
Sbjct: 438 IFLTRFPLELKSFYMKRCADDPRVTESFDVLMPTVGEVTGGSMRIDS------LDELMAG 491

Query: 294 -EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +++ +  E Y    D            G  +G +R++  +     + +    P 
Sbjct: 492 FKREGVNPEPYYWFSD--QRRYGSCPHGGYGLGTERILAWLCNRYTVRDCSLYPR 544


>gi|68487991|ref|XP_712154.1| hypothetical protein CaO19.6702 [Candida albicans SC5314]
 gi|68488042|ref|XP_712129.1| hypothetical protein CaO19.13994 [Candida albicans SC5314]
 gi|77023058|ref|XP_888973.1| hypothetical protein CaO19_6702 [Candida albicans SC5314]
 gi|46433497|gb|EAK92935.1| hypothetical protein CaO19.13994 [Candida albicans SC5314]
 gi|46433524|gb|EAK92961.1| hypothetical protein CaO19.6702 [Candida albicans SC5314]
 gi|76573786|dbj|BAE44870.1| hypothetical protein [Candida albicans]
          Length = 552

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 104/357 (29%), Gaps = 59/357 (16%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           + +    +R            +  R    +++R +F E    E+    +      G  T 
Sbjct: 228 DPNLLLDQRHLALRGESLSAVMKVRAAYSAAIRRFFTEEGLTEVTPPCMVQNQVEGGST- 286

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   D+  +  YL  S +   +  L A    ++C   ++R  +     H  E+
Sbjct: 287 -------LFKLDYYGEEAYLTQSSQLYLETCL-ASLGDVYCIQESFRAEKSHTRRHLSEY 338

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++E L+     ++    +   +   +                      + 
Sbjct: 339 THIEAELVFITFEDLLTHLEKLLSKTIQYVLEDPVAG------------------PIVKQ 380

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCC 235
            N D         + +         + GI     + +   D  +     K+     IN  
Sbjct: 381 LNPDFKAPKAPFKRMEYIEALDWLNEHGIPNEDGEKFKFGDDIAEAAERKMTDT--INEP 438

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            +L R+PA   S        DPR T+  ++   N+         +D  +         + 
Sbjct: 439 ILLTRFPAEIKSFYMQRCKDDPRVTESVDVLMPNVGEITGGSMRIDNYD---------EL 489

Query: 295 KKKIYNETYPIDEDF----LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +  E   +D  +    +          G  +G +R +  +     + +    P 
Sbjct: 490 MAALKRENLNLDSYYWFTDVRK-YGSAPHGGYGIGLERQLAYMLNRYTVRDCSLYPR 545


>gi|313678487|ref|YP_004056227.1| asparagine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950370|gb|ADR24965.1| asparagine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 452

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 117/348 (33%), Gaps = 38/348 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           H R R       +L R+ +   + ++F EN F+   +  +  +   E     F    +  
Sbjct: 123 HLRHRTNLLKCVMLIRSTLALEIHKFFAENNFLNFSAPIITSND-GEGAGEQF---YVND 178

Query: 70  DHIRKPLY------LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +  +P +      L  + +   +       EK++ FA  +R        H  EF M+E 
Sbjct: 179 GNKEQPFFGSNNATLGVTGQLHAESYAVG-FEKVYTFAPTFRAEHSNTKKHAAEFWMIEP 237

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    ++++     +++   +   +K     +   N   E     +     +   +  
Sbjct: 238 EIAFYDLKKVINFATKLLKNVIKNTIKKHPKEFDYLQNNVDETLLERLNTFIKKKLMV-- 295

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                      +  L    +        D  +   F+    + +   +       +  +P
Sbjct: 296 --------LDYKDALVELEKVKDRFENQDINFGLDFATEHEKYLAEEIAHGP-IAIINFP 346

Query: 243 APESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
               A       D +    F+L    I EL       +   +   R  +    K+++   
Sbjct: 347 KSFKAFYMYQNDDDKTVAAFDLLVPGIGELIGGSQREVRYEKLLERALEVGISKEEL--- 403

Query: 302 TYPID-EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + +D   F         S+G  +GF+RLVM +TG +NI +VI  P +
Sbjct: 404 QWYLDLRRFGHA--G---SAGFGIGFERLVMYITGVDNIRDVIPYPRT 446


>gi|195381141|ref|XP_002049313.1| GJ20822 [Drosophila virilis]
 gi|194144110|gb|EDW60506.1| GJ20822 [Drosophila virilis]
          Length = 460

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 119/359 (33%), Gaps = 53/359 (14%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------ 58
             H R R       +  R+  Q ++ +Y     F++I++  L  +      E        
Sbjct: 124 HLHLRSRIDYIAAQMRIRHKAQKAIHDYMDALNFVQINTPILTTNDCEGAGEVFRVQPDS 183

Query: 59  -------IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
                   R        Q +  + ++L  S +    + ++ G    + FA A+R      
Sbjct: 184 ERLLKQMARPNV--PPEQSYFDQKVFLSVSGQLHL-EAMSYGLGNTYTFAPAFRAENSKS 240

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMN-IIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
            LH  EF M E    H      +   +  +++           S  +      +    + 
Sbjct: 241 PLHLAEFYMFEAELVHIEQLDTLAAFIERMLKDITNRLLNSSASDLHFCQQNANASSDLA 300

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +A  +  + D              L+   + +    V+ D+     FS+     +  +
Sbjct: 301 WLQAPWKILSYD----------EAMALVVANSDKLKSAVSPDEG----FSKEQELFLVAH 346

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRF 288
            G     +L+     +     I  +DP+     +L   ++ ELC       D        
Sbjct: 347 CGA-PVFVLNWPTQQKPFYMKISRSDPQRVHALDLLMPSVGELCGGSLRECDAELLAA-- 403

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             ++ +     +  + +D   L     +P + G  MGF+R + L+TG  NI +VI  P 
Sbjct: 404 HPQLPK-----DLAWYVD---LRKYGGLP-TGGFGMGFERYLQLLTGVKNIRDVIPYPR 453


>gi|320167790|gb|EFW44689.1| Nars-like protein [Capsaspora owczarzaki ATCC 30864]
          Length = 563

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/352 (14%), Positives = 108/352 (30%), Gaps = 50/352 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETH 58
           + D  +  R            L  R+++  + RE+F    + E+   +L  +   G  T 
Sbjct: 240 DPDVLFDNRHLVLRTDTYSKILKLRSVVTQAFREHFFNRGYFEVTPPTLVQTMCEGGST- 298

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   D+  K  YL  S +   +  + A    +FC A ++R  +     H  E+
Sbjct: 299 -------LFKLDYFGKEAYLTQSSQLYLETAIPAV-GDVFCIAQSYRAEKSRTRRHLTEY 350

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E       +E L+    +++    E      ++      NP  +           + 
Sbjct: 351 THIEAECPFLDFETLLHKLEDLVCDVVERVLASPYAGLLKELNPNFKAPKRPFRRMEYKD 410

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
           A +                     ++  +R      +          +      I    +
Sbjct: 411 AIV-------------------WLKENDVRKPDGTFYEFGEDIPEAPERAMTDKIGEPIL 451

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           L R+P    +        D R T+  ++    +         +  +E     E E   ++
Sbjct: 452 LMRFPREIKAFYMQRDAGDQRLTESVDMLMPGVGEIVGGSMRIWNLE-----ELEAAYRR 506

Query: 297 KIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  +        ++           G  +G DR +  +   ++I +V + P 
Sbjct: 507 EEIDPAEYY--WYIDQRRYGTCPHGGYGLGLDRFLTWMFNRDHIRDVCFYPR 556


>gi|124801179|ref|XP_001349624.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|3845207|gb|AAC71894.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 610

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/281 (18%), Positives = 87/281 (30%), Gaps = 24/281 (8%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   K  +L  S + S +  L +    ++ F   +R        H  EF M+E   A   
Sbjct: 344 DFFSKQAFLTVSGQLSLEN-LCSSMGDVYTFGPTFRAENSHTSRHLAEFWMIEPEIAFAD 402

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
               M+     I+   +       +    +   F E     + +      N D       
Sbjct: 403 LYDNMELAEAYIKYCIDYV----LNNNFHDIYYFEENVETNLIKRLKNILNEDFAKITY- 457

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                  +L   +    ++V     W           I   +      I+  YP    A 
Sbjct: 458 --TNAIEILQNYSDSFEVKVE----WGMDLQSEHERFIAEKIFKKPV-IVYNYPKDLKAF 510

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                 D +     ++    I       +  D      R +K ++EKK   +        
Sbjct: 511 YMKLNEDNKTVAAMDVLVPKIGEVIGGSQREDN---LERLDKMIKEKKLNIDS-----YW 562

Query: 309 FLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +   L        +G  +GF+RL+MLVTG +NI + I  P 
Sbjct: 563 WYRQLRQYGSHPHAGFGLGFERLIMLVTGVDNIKDTIPFPR 603



 Score = 46.6 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 12/68 (17%)

Query: 3   QIPSQPWW---NRD-FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +       R+  H R R       +  RN +  +   +F    F+ I +  +  S 
Sbjct: 195 PLSKKNHGKEFLREVAHLRPRSYFISSVIRIRNSLSIATHLFFQSRGFLYIHTPLITTSD 254

Query: 53  --PGNETH 58
              G E  
Sbjct: 255 CEGGGEMF 262


>gi|291320251|ref|YP_003515512.1| asparaginyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752583|emb|CBH40555.1| Asparaginyl tRNA synthetase [Mycoplasma agalactiae]
          Length = 452

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/347 (16%), Positives = 120/347 (34%), Gaps = 36/347 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           H R R       +L R+ +   + ++F EN F+   +  +  +   E     F    +  
Sbjct: 123 HLRHRTNLLRCVMLIRSTLALEIHKFFAENGFLNFSAPIITSND-GEGAGEQF---YVND 178

Query: 70  DHIRKPLY------LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            + ++P +      L  + +   +       EK++ FA  +R        H  EF M+E 
Sbjct: 179 GNKKQPFFGNNNATLGVTGQLHAESYAIG-FEKVYTFAPTFRAEHSNTKKHAAEFWMIEP 237

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    ++++     +++   +    K             E EY+      +    ++ 
Sbjct: 238 EVAFYDLKKVINLAAKLLKSVIKNTINKHL----------REFEYLQNNVDSSLLERLNS 287

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                      +  L    +        D  +   F+    + +   +       +  +P
Sbjct: 288 FIKKKLMILDYKDALVELEKVKDKFENKDIKFGLDFATEHEKYLAEEIAHGPV-AIINFP 346

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
               A      +D +    F+L    I       EL+   ++  R+EK ++   ++    
Sbjct: 347 KSFKAFYMHQNSDNQTVAAFDLLVPGI------GELIGGSQREARYEKLLERALEVGISK 400

Query: 303 YPIDEDF-LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +     L        S+G  +GF+RLVM +TG +NI +VI  P +
Sbjct: 401 EELQWYLDLRRFGHSG-SAGFGIGFERLVMYITGVDNIRDVIPYPRT 446


>gi|320334289|ref|YP_004171000.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755578|gb|ADV67335.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 432

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 104/341 (30%), Gaps = 41/341 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              + R  L  +  I ++ RE+ ++  F EI S  +  +      ++          D+ 
Sbjct: 127 RGLKERATLKVQAEIVAAFREHLIDEGFTEIYSPKIVSAGAEGGANL-------FELDYF 179

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +  YL  SP+   K+++    E++F  A  +R  E     H  E+  L+        E+
Sbjct: 180 GQRAYLAQSPQLY-KQIMVGTFERVFEVAPVFRAEEHATSRHLNEYLSLDVELGFIESEE 238

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            + D    +  A     +   S +                                 P  
Sbjct: 239 DVMDVETRLLSAIMTRLRARASAEFDLLGAAIP------------------DVPQHIPRI 280

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  L  ++ G  V   D   +   R+L +      G +    + +YP         
Sbjct: 281 ELLEARRLVQERYGHAVGGKDLDPEG-ERLLSQHYAEQHGTD-FVFVTKYPKAARPFYAY 338

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              D   T+ F+L    IE+ +    + +              ++   +      E +  
Sbjct: 339 PEGD--LTRGFDLLFRGIEITSGGQRIHEHAMLLQ------SLREYRIDPAQM--EGYTE 388

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                MP   G A+G +RL   + G  N+      P  +  
Sbjct: 389 VFKHGMPPHGGFAIGAERLTAKLLGIANVRYARAFPRDRHR 429


>gi|154336461|ref|XP_001564466.1| asparaginyl-trna synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061501|emb|CAM38530.1| putative asparaginyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 895

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 98/332 (29%), Gaps = 25/332 (7%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
            L  R+ +  + REYF   ++ E+   +L  +   E     F      ++      YL  
Sbjct: 577 VLKVRHELLRAFREYFWSRRYYEVTPPTLVQTQV-EGGSTLFDVLYYGENA-----YLTQ 630

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           S +    + + A    ++C   ++R  +     H  EFT LE            +D +N 
Sbjct: 631 SSQLYL-ETVTASLGNVYCCLPSYRAEKSKTKRHLSEFTHLEIEY----DVCSFEDLLNH 685

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +          +           +  + I          N                 +  
Sbjct: 686 LEDMICTVIHTVIERAGNMVAMLNPTQLINPNGDVRDSTNYKFTPKRPFRRLRYADAIQ- 744

Query: 200 QAQQAGI---RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPAD 255
              + GI          + D  +      +   +G      +  +PA   S      PAD
Sbjct: 745 FCNENGILNTETGKPFEFGDDITDQPERAMVAQMGE--FVFMTHFPAQMKSFYMQRDPAD 802

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
              T+  ++    I         +   ++      +  +++ +   TY    D       
Sbjct: 803 TTLTESVDVLVPGIGEVVGGSMRMYKYDEL----LDAYKREGLDASTYYWYTD--QRRYG 856

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +RL++ +   +N+ +    P 
Sbjct: 857 GAPHGGFGLGVERLLVWMLNLDNVKDACMYPR 888


>gi|301769781|ref|XP_002920308.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like
           [Ailuropoda melanoleuca]
          Length = 559

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 110/332 (33%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+++    R++F +  + E+   +L      G  T        L   D+  +  +L
Sbjct: 256 ILKARSVVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 307

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A    +FC A ++R  +     H  E+T +E      ++E+L+    
Sbjct: 308 TQSSQLYLETCIPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNRLE 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +    + NP  +P                    ++  D       
Sbjct: 367 DLVCDVVDRVLKSPAASIVRDLNPNFKPPKRPF-------------KRMNYSDAIVWLKE 413

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 414 HDIKKEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 467

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     ++ I    Y    D       
Sbjct: 468 RLTESVDVLMPNVGEIVGGSMRIWDSEEILAGYK-----REGIDPTPYYWYTD--QRKYG 520

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 521 TCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 552


>gi|114673279|ref|XP_512149.2| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic isoform 5 [Pan
           troglodytes]
 gi|114673281|ref|XP_001139185.1| PREDICTED: asparaginyl-tRNA synthetase isoform 4 [Pan troglodytes]
          Length = 548

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+M+    R++F +  + E+   +L      G  T        L   D+  +  +L
Sbjct: 245 ILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 296

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E      +++ L+    
Sbjct: 297 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLE 355

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +          NP  +P          R    D    L   D       
Sbjct: 356 DLVCDVVDRILKSPAGSIVHELNPNFQPPKRPF----KRMNYSDAIVWLKEHDVK----- 406

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 407 ----KEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 456

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+         +   E     E     K++  + T      D+      
Sbjct: 457 RLTESVDVLMPNVGEIVGGSMRIFNSE-----EILAGYKREGIDPTPYYWYTDQR----K 507

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 508 YGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 541


>gi|68076563|ref|XP_680201.1| asparagine--t RNA ligase [Plasmodium berghei strain ANKA]
 gi|56501100|emb|CAH97288.1| asparagine--t RNA ligase, putative [Plasmodium berghei]
          Length = 646

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/368 (15%), Positives = 107/368 (29%), Gaps = 54/368 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRA----- 61
           H R R          ++ +      YF +N +  I++  L  +    G E          
Sbjct: 291 HLRGRTKLYSSIFRLKSDLIIETFNYFKKNNYTYINTPILTSNDCEGGGELFHVTTSPNK 350

Query: 62  ------------FSTE---------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
                       F  E            +   +KP YL  S + +  + L      +F  
Sbjct: 351 NKKAEIDTENINFINEKNNNFDKKNSEKKQFFKKPCYLNVSSQLAL-ECLCCSIGDVFTI 409

Query: 101 AHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
             ++R        H  EF MLE   A  +   ++ +    I+                  
Sbjct: 410 NQSFRAENSNTSRHLSEFLMLEVELAFSNLNNIIFESEKYIKEMINFV-----------L 458

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
               + EYI          N++               + +  ++    V + D      S
Sbjct: 459 CKSEDIEYINEHHDQNLKKNLEEILKKTFIIITYEEAIQILKKRDNSNVNNFDFLESDIS 518

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
               + +  N+      I+  YP            D +     ++   N+       E  
Sbjct: 519 FEDQKYLT-NIYFESPIIIINYPNSIKPFYMKLNDDKKTVSCMDIIFPNVGEIAGGSERE 577

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNI 339
                 +  + +M++ K   +   P  E  L         SG  +G DRL+M +   +NI
Sbjct: 578 TN---LNILKDQMKKNKLNIDLYNPYLE--LRK-YGNIPHSGFGLGIDRLIMYILSMSNI 631

Query: 340 NEVIWTPF 347
            +++  P 
Sbjct: 632 RDIVPFPR 639


>gi|310791083|gb|EFQ26612.1| aspartyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 584

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 112/335 (33%), Gaps = 37/335 (11%)

Query: 20  PFLLKRNMIQSSL-------R----EYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
           P + KR  +Q ++       R    EY     F++ +   L  +  +E     F      
Sbjct: 257 PVMHKRAPVQQAIADIRMATRKLFAEYLDAQGFVQFEPPCLIGAA-SEGGANVFQLP--- 312

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHE 127
             +  K   L  SP+F  +  +A G ++++C    +R        H  EFT L+     E
Sbjct: 313 --YFDKSACLAQSPQFYKQFEIAGGRKRVYCIGPVFRAENSNTPRHMTEFTGLDLEMEIE 370

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
                ++D +  +        ++  +            E          +   + G  + 
Sbjct: 371 DDYHEVQDMLEKVLLHIFRGLKERCADAIDTVRAVYPSED---------FLLPEPGKEVR 421

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PES 246
                 + LL  +  +    V+ ++  S    + L   I      +   +LD++P     
Sbjct: 422 LTFAEGQKLLREEGPEEYRNVSDEEDMSTPQEKALGALIRKKFNTD-FYVLDKFPEGARP 480

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
             A   P +P+ T  ++ +    E+ +    +  P     R       KK I   +  I 
Sbjct: 481 FYALEDPENPKVTNAYDFFMRGQEILSGGQRIHIPSVLEARL-----RKKGIDPNSQGIK 535

Query: 307 EDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNI 339
           E ++       +P   G  +G DR+V       ++
Sbjct: 536 E-YVDVFRSAGVPPHGGGGIGLDRVVAWFLNLPSV 569


>gi|297607220|ref|NP_001059657.2| Os07g0485400 [Oryza sativa Japonica Group]
 gi|255677765|dbj|BAF21571.2| Os07g0485400 [Oryza sativa Japonica Group]
          Length = 553

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/366 (13%), Positives = 93/366 (25%), Gaps = 76/366 (20%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
            H R R          RN +  +  ++F +N F+ + S  +  S       + + T LI 
Sbjct: 227 AHLRPRTNTFGAVARVRNALAYATHKFFQDNGFVWVASPIITASDCEGAGEQFYVTTLIS 286

Query: 69  QDHIR-----------------------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                                       KP +L  S + + +    A    ++ F   +R
Sbjct: 287 NSAEGGSLVKDIPSTKDGRVDWSQDFFCKPAFLTVSGQLNGETYATA-LSDVYTFGPTFR 345

Query: 106 NGEQGC-LHQPEFTM-LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
                   H  EF +        E  +         I        +K             
Sbjct: 346 AENSNTSRHLAEFWVKYVLENCKEDMDFFNTWIEKGIIDRLNDVVEKN------------ 393

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
              +++ ++                               +  +      W         
Sbjct: 394 -FVHLSYSD------------------------AIELLVGSKKKFEFPVKWGLDLQSEHE 428

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             I          I+  YP    A       D +     +L    +       EL+   +
Sbjct: 429 RYITEVAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDLLVPRV------GELIGGSQ 482

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           +  R +       ++          +L          +G  +GF+RLV   TG +NI + 
Sbjct: 483 REERLDYLEARLDELNLNKDSY-WWYLDLRRYGSVPHAGFGLGFERLVQFATGMDNIRDT 541

Query: 343 IWTPFS 348
           I  P  
Sbjct: 542 IPFPRV 547


>gi|119194865|ref|XP_001248036.1| aspartyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
          Length = 565

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 93/326 (28%), Gaps = 24/326 (7%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           + +     E+ +++    I +  L  +   E     F        + ++  YL  SP+  
Sbjct: 255 SGVAQLFAEFMLKSGARWIFTSKLSGAA-TEGGADVFE-----LGYFKRKAYLSQSPQLG 308

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
            +  +A     +F     +R  E     H  EF  L++ R    +   +      +    
Sbjct: 309 KQMCIAGDMMNVFEIGPVFRAEESNTHRHLTEFIGLDFERTFHRHYHEVLSFAEELLVFI 368

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
               +  +  Q                    +   +     +    +    +   +  + 
Sbjct: 369 LSELKTRYKDQIEVIQKSYPKAGDFRLPKDGKALRLKYMDGIALLKEAGVDVSEQERFEN 428

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFE 263
            +  A +     I                   +LD++P+          P DP F+  ++
Sbjct: 429 DLTTAMEKQLGRIIRERYD---------TDFYVLDKFPSAVRPFYTKACPEDPTFSNSYD 479

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
            +    E+ +    +    E       E     +  +      ED+L          +G 
Sbjct: 480 FFMRGEEIMSGAQRINVAEEL------EAAMIARGVDPKAEGFEDYLGAFRQGCAPHAGG 533

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFS 348
            +G +R+VM   G  NI      P  
Sbjct: 534 GLGLNRIVMFFLGLPNIRLATLFPRD 559


>gi|15806075|ref|NP_294779.1| aspartyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|6458780|gb|AAF10623.1|AE001956_4 aspartyl-tRNA synthetase, non-discriminating [Deinococcus
           radiodurans R1]
          Length = 435

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 99/347 (28%), Gaps = 45/347 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              + R  L  +  +  + R +     F EI +  +  +      ++          D+ 
Sbjct: 122 RGLKERAALKVQAELVDAFRAHLRGEGFTEISTPKIVSAGAEGGANLFPI-------DYF 174

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
             P YL  SP+   K+++    E++F  A  +R  E     H  E+  L+        E+
Sbjct: 175 GHPAYLAQSPQLY-KQIMVGVFERVFEVAAVYRAEEHATSRHLNEYLSLDVEMGFIEDEE 233

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +    N +                       E    T    F              P  
Sbjct: 234 DVMGLENRL------------------LASIMERLRATSQAEFELLGATIPDVPAHIPRI 275

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  L  ++ G  V           R+L +      G +    + +YP         
Sbjct: 276 TLMDARQLVTEKYGHPVG-GKDLDPEAERLLSQHFAETEGSD-FVFVTKYPRAARPFYAH 333

Query: 252 YPADPR------FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
              +         T+ F+L    IE+ +    + D          +     K+  E+   
Sbjct: 334 PELNEDGSVNGEVTRGFDLLFRGIEITSGGQRIHDYGML-----MDSIAAYKLKPESL-- 386

Query: 306 DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            E +       MP   G A+G +RL   + G  N+      P  +  
Sbjct: 387 -EGYTEVFKYGMPPHGGFAIGAERLTAKLLGIANVRYARAFPRDRHR 432


>gi|301609856|ref|XP_002934488.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Xenopus
           (Silurana) tropicalis]
          Length = 555

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/332 (14%), Positives = 101/332 (30%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
               R+ +    R +F +  + EI   +L      G  T        L   D+  +  YL
Sbjct: 252 IFKVRSTVIHCFRNHFFDRGYYEITPPTLVQTQVEGGST--------LFKLDYFGEEAYL 303

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A     FC A ++R  +     H  E+T +E      ++E L+    
Sbjct: 304 TQSSQLYLETCIPA-MGDTFCIAQSYRAEQSRTRRHLAEYTHIEAECPFMTFEDLLNRLE 362

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +    + +P  +P                           +    
Sbjct: 363 DLVCDVVDRVLKSPVASLLYDLHPEFKPPKRPFRRM-------------------NYTEA 403

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++  ++      +          +      IN   +L R+PA   S        D 
Sbjct: 404 ITWLKEHDVKKDDGTYYEFGEDIPEAPERLMTDSINEPILLCRFPAEIKSFYMQRCAEDK 463

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     ++ I    Y    D       
Sbjct: 464 RLTESVDVLMPNVGEIVGGSMRIWDSEELLEGYK-----REGIDATPYYWYTD--QRKYG 516

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +   ++I +V   P 
Sbjct: 517 TCPHGGYGLGLERFLTWILNRHHIRDVCLYPR 548


>gi|269859615|ref|XP_002649532.1| aspartyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511703|sp|B7XHQ4|SYDC_ENTBH RecName: Full=Probable aspartyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Aspartate--tRNA ligase; Short=AspRS
 gi|220067083|gb|EED44551.1| aspartyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 474

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 102/325 (31%), Gaps = 34/325 (10%)

Query: 27  MIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
               + R Y   ++FIEI +   +Q       ++          ++  KP YL  SP+  
Sbjct: 175 QTMYTFRTYLRTHEFIEIKTSKIIQSGSEGGANL-------FSLNYFNKPAYLAQSPQLY 227

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
            +  +  G ++++   H +R        +  EF  L+     E+        ++ +    
Sbjct: 228 KQLAIIGGLKRVYEIGHVYRAEVSNINRYLSEFVGLDIEMEMETTYIDFIHFLHSLFINI 287

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
             + +     +      + E   +            D                    +  
Sbjct: 288 FESFKNEMKKELEIIRQYYEFVDLKYRSTPIIITYKD---------------AVDMLKSK 332

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFEL 264
            I++ +   +S    RIL + I+    I+    +  YP+   A  +      + T+ ++ 
Sbjct: 333 NIQIDYGCDFSREHERILGKIIKDKEDID-IFTIIDYPSSIRAFYSYIDETTKLTRSYDF 391

Query: 265 YACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIA 323
                E+ +           R+ + K     K +  E     +++L       P   G  
Sbjct: 392 IVRGEEILSGAQREN-----RYDYLKNAVIDKGLNPENL---KNYLEAFKYGAPPHIGCG 443

Query: 324 MGFDRLVMLVTGANNINEVIWTPFS 348
           +G +R +    G ++I      P  
Sbjct: 444 IGLERFLKAYFGFDDIRYFSLFPRD 468


>gi|114673283|ref|XP_001138861.1| PREDICTED: asparaginyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 518

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+M+    R++F +  + E+   +L      G  T        L   D+  +  +L
Sbjct: 215 ILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 266

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E      +++ L+    
Sbjct: 267 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLE 325

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +          NP  +P          R    D    L   D       
Sbjct: 326 DLVCDVVDRILKSPAGSIVHELNPNFQPPKRPF----KRMNYSDAIVWLKEHDVK----- 376

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 377 ----KEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 426

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+         +   E     E     K++  + T      D+      
Sbjct: 427 RLTESVDVLMPNVGEIVGGSMRIFNSE-----EILAGYKREGIDPTPYYWYTDQR----K 477

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 478 YGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 511


>gi|327299364|ref|XP_003234375.1| asparaginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326463269|gb|EGD88722.1| asparaginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 580

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/335 (15%), Positives = 102/335 (30%), Gaps = 45/335 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHIRKPLYLQ 79
            L  R  +  + R+ F + Q +E+   ++  +     + +  F       D+  +  YL 
Sbjct: 276 VLKVRAAVVRAFRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEF-------DYYGEKAYLT 328

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S +   +  L A    +FC   ++R  +     H  E+T +E      ++  L+     
Sbjct: 329 QSSQLYLETCL-ASLGDVFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEE 387

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           II    +++                         AF +  N +         +       
Sbjct: 388 IICSVIDISLAD------------------PQIAAFVKQLNPNFTPPARPFRRMRYSEAI 429

Query: 199 LQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP-AD 255
               + GI    D      D  +     K+     IN   +L  +PA   A        D
Sbjct: 430 EWLNEHGINNEEDKPHSFGDDIAEAAERKM--TDIINKPILLTHFPAEIKAFYMKKDAED 487

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLAC 312
           PR T+  ++    +         +D  +     E     KK+  + T      D+     
Sbjct: 488 PRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMGAYKKEGMDPTPYYWYTDQR---- 538

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                   G  +G +R +  + G   + E    P 
Sbjct: 539 KYGTSPHGGYGLGLERFLAWMCGRYTVRECSLYPR 573


>gi|325283207|ref|YP_004255748.1| Aspartate--tRNA ligase [Deinococcus proteolyticus MRP]
 gi|324315016|gb|ADY26131.1| Aspartate--tRNA ligase [Deinococcus proteolyticus MRP]
          Length = 441

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/344 (17%), Positives = 110/344 (31%), Gaps = 42/344 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
                R  L  +  + +  R    +  F EI +  +    G E     F+      D+  
Sbjct: 131 RGLEARAVLRVQAELLAGFRAALGDMGFTEISTPKIVE-AGAEGGANLFTV-----DYFG 184

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQL 132
           +P YL  SP+   + ++ A  E++F  A  +R  +     H  E+  L+        E+ 
Sbjct: 185 EPAYLAQSPQLYKQMMVGA-FERVFEVAPVFRGEQHNTSRHLTEYLSLDAELGFIDSEED 243

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + D    +         +    +                E  AR   I           P
Sbjct: 244 VMDVETEVLRVMLARVAERCGPELALLGATLP-------EVPARIPRI-----------P 285

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                 L  ++ G  V   D   +   R+L E +   LG +    + ++P          
Sbjct: 286 LLEARALVEREFGHPVGGKDLDPEG-ERLLGEYVRRELGSD-FVFVTQFPQAARPFYTHP 343

Query: 253 PADPR---FTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKKIYNETYPIDE 307
             +      T+ F+L    +E+ +    + DP       E      +  + Y+E +    
Sbjct: 344 AGEVDGVPVTRGFDLLLRGLEITSGGQRIHDPQMLAQSIEAYGLNPDSLRGYSEVF---- 399

Query: 308 DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                   MP   G A+G +RL  L+ G  N+      P  ++ 
Sbjct: 400 -----RYGMPPHGGFAIGAERLTALLLGIGNVRMARAFPRDRTR 438


>gi|225684263|gb|EEH22547.1| asparaginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 580

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/353 (13%), Positives = 104/353 (29%), Gaps = 51/353 (14%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +    Y  R            +  R     + R+ F E   +E+   ++  +     + +
Sbjct: 256 DPHTLYDNRHLVLRGETSSSVMKVRAATLRAFRKAFEEKGMLEVTPPAMVQTQVEGGSTL 315

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
             F       D+  +  YL  S +   +  L +    +FC   ++R  +     H  E+T
Sbjct: 316 FEF-------DYYGEKAYLTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEYT 367

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      S+  L+    ++I    ++   +    Q V     +        +      
Sbjct: 368 HVEAELDFISFTDLLDHLEDMICRVIDLVLSEPLIAQYVKNLNPTFTLPSRPFKRMKYAE 427

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            I+     + P++                      + D  +     K+     ++    L
Sbjct: 428 AIEWLVEHNIPNEE----------------GQPHRFGDDIAEAAERKM--TDMLSRPIFL 469

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
             +P    +      P DPR T+  ++    +         +D  +     E     K++
Sbjct: 470 THFPTEIKAFYMKKDPDDPRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMAAYKRE 524

Query: 298 IYNETYPI---DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             + +      D+             G  +G +R +  + G   + E    P 
Sbjct: 525 GMDPSPYYWYTDQR----KYGTSPHGGYGLGLERFLAWMCGRYTVRECCLYPR 573


>gi|326432096|gb|EGD77666.1| asparaginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 608

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 91/293 (31%), Gaps = 26/293 (8%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
             +D  ++  YL  S +   +    +    I+ F   +R        H  EF M+E   A
Sbjct: 324 FTKDFFKRAAYLTVSGQLQGESYACSM-GNIYTFGPTFRAENSNTTRHLAEFWMIEPEIA 382

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR-----YANI 180
                  M    + +R   +            + + F++    TV +         +A +
Sbjct: 383 FCDLTGCMDCAEDYVRYCCQYV----LDNCRADLDFFAKFVDKTVIDRVTELTAKQFARV 438

Query: 181 DLGTTLDNPDQPDRHLLYLQ-AQQAGIRVAHDDTWSD--IFSRILIEKIEPNLGINCCTI 237
           +    +    +           ++AG +   +    +    +      +  ++      I
Sbjct: 439 EYKDAVKQLLELQAAFESKTDEEKAGKKSLFEIPVGERIDLATEHERYLTEHIYKGPV-I 497

Query: 238 LDRYPAPESALANI--YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           L  YP    A      +           L     EL             R R ++     
Sbjct: 498 LYNYPKEIKAFYMRETHDEFDSVAAMDILVPKIGELVGGSQREERLDVLRRRLQE----- 552

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               +E+    E +L          SG  +GF+RL+MLVTG  NI +VI  P 
Sbjct: 553 -AGLDESDY--EWYLDLRRFGTVPHSGFGLGFERLIMLVTGMENIRDVIPYPR 602



 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 5/47 (10%)

Query: 11  NRDFHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            +  H R R  +       RN +  +   +F +N F+ + +  +  S
Sbjct: 182 RKHCHLRARTNIISAVARVRNALAQATHRFFSDNGFMYLHTPLITAS 228


>gi|150866377|ref|XP_001385955.2| asparaginyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149387633|gb|ABN67926.2| asparaginyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 511

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/362 (16%), Positives = 101/362 (27%), Gaps = 40/362 (11%)

Query: 16  YRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI-------- 59
            R R       L  R+ ++SSL E+F  N F ++    +  S      E           
Sbjct: 155 LRHRTSTLASLLRFRSFVESSLFEFFNGNSFTKVVPPLITSSDCEGAGEQFSVESLSKLN 214

Query: 60  --RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPE 116
             R  +T         K  YL  S +    ++LA    +++     +R  +     H  E
Sbjct: 215 ESRNKTTLSSEDHFFGKSTYLTVSTQLHL-EVLALSLNRVWTLTPCFRAEDSNTNRHLSE 273

Query: 117 FTMLEWYRAH-ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           F MLE    +     QL     ++IR  A    Q                      +   
Sbjct: 274 FWMLEAEICYLGDLNQLTSFTEDMIRHVANSLKQSCNDSSISGGAVDLLGSRFNKEDVEL 333

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD--TWSDIFSRILIEKIEPNLGIN 233
                D   +  +              +   +    +   W D       + +      +
Sbjct: 334 MKNRWDTVLSEASWPSITYTEAVEIINRVMNKGRSKNRLQWGDSIQTPHEKWLAGEYFKS 393

Query: 234 CCTILDRYPAPESALANIYPADPR------FTKRFELYACNIELCNACDELLDPIEQRHR 287
               +  YP  E         +              L      +  +  E          
Sbjct: 394 PV-FITDYPTAEKPFYMPKSKNFDPQRPTVACYDLILPEIGELVGGSMREHNYNN----- 447

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +EM+ +    +E       +L+          G  MGF+RL+  ++G  N+ EVI  P
Sbjct: 448 LVEEMKNRNMNLDEMQ----WYLSTRENGTVPHGGFGMGFERLIAYLSGMENVKEVIPFP 503

Query: 347 FS 348
             
Sbjct: 504 RV 505


>gi|28572907|ref|NP_789687.1| aspartyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28411040|emb|CAD67425.1| aspartyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 432

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 108/331 (32%), Gaps = 39/331 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            + R       +     +LR ++V N FIEI++  L  S            EL    +  
Sbjct: 125 RNERNNLIFRIQTCFLHALRTWWVRNGFIEINTPKLMASSS------ESRAELFSLKYFD 178

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           +  YL  SP+F  +   AAG  K+F  A  +R        H  E+T ++   +     + 
Sbjct: 179 RIGYLAQSPQFFKQMSQAAGFGKVFEIAPVYRADPSFTSRHATEYTSIDSELSWIESHED 238

Query: 133 MKDCMNIIRCA--AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           + +    +      +V  +     + V       P+   V     +  NI   +   +  
Sbjct: 239 VMNMQEELLTYSICDVLERHSEEIRGVFGLNLCPPKRPFVRVTLEQALNISARSGHISQ- 297

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
              RH L  +A++   + A D+  SD                     +  YP       +
Sbjct: 298 ---RHDLDPEAERRVGKWALDNHASDFV------------------FVTNYPVSVRPFYH 336

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
           +   +   TK ++L    IE+                   + +EK  +         DF 
Sbjct: 337 M-RENENITKSYDLLFRGIEIATGAQREHRYDV----LVDQAREK-GLDLSELGYYLDFF 390

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINE 341
                MP   G   G  R++M +    +I E
Sbjct: 391 R--YGMPPHGGFGAGLARIIMALLRLGSIKE 419


>gi|28493721|ref|NP_787882.1| aspartyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28476763|gb|AAO44851.1| aspartyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 446

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 108/331 (32%), Gaps = 39/331 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            + R       +     +LR ++V N FIEI++  L  S            EL    +  
Sbjct: 139 RNERNNLIFRIQTYFLHALRTWWVRNGFIEINTPKLMASSS------ESRAELFSLKYFD 192

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           +  YL  SP+F  +   AAG  K+F  A  +R        H  E+T ++   +     + 
Sbjct: 193 RIGYLAQSPQFFKQMSQAAGFGKVFEIAPVYRADPSFTSRHATEYTSIDSELSWIESHED 252

Query: 133 MKDCMNIIRCA--AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           + +    +      +V  +     + V       P+   V     +  NI   +   +  
Sbjct: 253 VMNMQEELLTYSICDVLERHSEEIRGVFGLNLCPPKRPFVRVTLEQALNISARSGHISQ- 311

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
              RH L  +A++   + A D+  SD                     +  YP       +
Sbjct: 312 ---RHDLDPEAERRVGKWALDNHASDFV------------------FVTNYPVSVRPFYH 350

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
           +   +   TK ++L    IE+                   + +EK  +         DF 
Sbjct: 351 M-RENENITKSYDLLFRGIEIATGAQREHRYDV----LVDQAREK-GLDLSELGYYLDFF 404

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINE 341
                MP   G   G  R++M +    +I E
Sbjct: 405 R--YGMPPHGGFGAGLARIIMALLRLGSIKE 433


>gi|281337495|gb|EFB13079.1| hypothetical protein PANDA_009023 [Ailuropoda melanoleuca]
          Length = 545

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 110/332 (33%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+++    R++F +  + E+   +L      G  T        L   D+  +  +L
Sbjct: 242 ILKARSVVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 293

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A    +FC A ++R  +     H  E+T +E      ++E+L+    
Sbjct: 294 TQSSQLYLETCIPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNRLE 352

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +    + NP  +P                    ++  D       
Sbjct: 353 DLVCDVVDRVLKSPAASIVRDLNPNFKPPKRPF-------------KRMNYSDAIVWLKE 399

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 400 HDIKKEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 453

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     ++ I    Y    D       
Sbjct: 454 RLTESVDVLMPNVGEIVGGSMRIWDSEEILAGYK-----REGIDPTPYYWYTD--QRKYG 506

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 507 TCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 538


>gi|194759334|ref|XP_001961904.1| GF15206 [Drosophila ananassae]
 gi|190615601|gb|EDV31125.1| GF15206 [Drosophila ananassae]
          Length = 558

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 117/351 (33%), Gaps = 50/351 (14%)

Query: 12  RDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHI 59
            D     R  +++          R+++  + R ++ E  + E+   +L      G  T  
Sbjct: 236 PDVQLDNRHIMIRGENTSKVLKMRSVVAQAFRAHYEERGYNEVTPPTLVQTQVEGGST-- 293

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 L    +  +  YL  S +   +  L A    +F  + ++R  +     H  E++
Sbjct: 294 ------LFKLKYFGEEAYLTQSSQLYLETCLPA-LGDVFTISQSYRAEQSRTRRHLAEYS 346

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      ++E+L+    +++    +   +  + +     NP  +P      + F R  
Sbjct: 347 HVEAECPFITFEELLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFQPP----KKPFRRMN 402

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            +D    L + +       + +             + +        K+     IN   +L
Sbjct: 403 YVDAIQWLKDNNVTKDDGTFYE-------------FGEDIPEAPERKMTDT--INEPIML 447

Query: 239 DRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            R+PA   S   +    D R T+  + L     E+      + D  E    +E     ++
Sbjct: 448 CRFPAEIKSFYMSRCKEDQRLTESVDVLLPNVGEIVGGSMRIHDSEELLKGYE-----RE 502

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            I  + Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 503 GIDPKPYYWYTD--QRIYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPR 551


>gi|323337256|gb|EGA78509.1| Ded81p [Saccharomyces cerevisiae Vin13]
 gi|323348346|gb|EGA82594.1| Ded81p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 554

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/352 (14%), Positives = 110/352 (31%), Gaps = 49/352 (13%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            +  R  +  S+R  + E    E+    +      G  T 
Sbjct: 230 DPSLLLDQRHLALRGDALSAVMKVRAALLKSVRRVYDEEHLTEVTPPCMVQTQVEGGST- 288

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   ++  +  YL  S +   +  L A    ++    ++R  +     H  E+
Sbjct: 289 -------LFKMNYYGEEAYLTQSSQLYLETCL-ASLGDVYTIQESFRAEKSHTRRHLSEY 340

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E   A  +++ L++    +I  + +   +   +   V       P +      F R 
Sbjct: 341 THIEAELAFLTFDDLLQHIETLIVKSVQYVLEDPIAGPLVKQLN---PNFKAPKAPFMRL 397

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
              D  T L+  D  +                 D  + D  +     K+   +G+     
Sbjct: 398 QYKDAITWLNEHDIKNEE-------------GEDFKFGDDIAEAAERKMTDTIGV--PIF 442

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           L R+P    S        DPR T+  ++   N+         +D +++         +++
Sbjct: 443 LTRFPVEIKSFYMKRCSDDPRVTESVDVLMPNVGEITGGSMRIDDMDEL----MAGFKRE 498

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            I  + Y     F+           G  +G +R++  +     + +    P 
Sbjct: 499 GIDTDAYY---WFIDQRKYGTCPHGGYGIGTERILAWLCDRFTVRDCSLYPR 547


>gi|6321807|ref|NP_011883.1| Ded81p [Saccharomyces cerevisiae S288c]
 gi|731638|sp|P38707|SYNC_YEAST RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|500693|gb|AAB68874.1| Ded81p: Asparaginyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|151943961|gb|EDN62254.1| asparaginyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|190405803|gb|EDV09070.1| asparaginyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|256269240|gb|EEU04565.1| Ded81p [Saccharomyces cerevisiae JAY291]
 gi|259147047|emb|CAY80302.1| Ded81p [Saccharomyces cerevisiae EC1118]
 gi|285809921|tpg|DAA06708.1| TPA: Ded81p [Saccharomyces cerevisiae S288c]
 gi|323333337|gb|EGA74734.1| Ded81p [Saccharomyces cerevisiae AWRI796]
 gi|323354779|gb|EGA86613.1| Ded81p [Saccharomyces cerevisiae VL3]
          Length = 554

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/352 (14%), Positives = 110/352 (31%), Gaps = 49/352 (13%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            +  R  +  S+R  + E    E+    +      G  T 
Sbjct: 230 DPSLLLDQRHLALRGDALSAVMKVRAALLKSVRRVYDEEHLTEVTPPCMVQTQVEGGST- 288

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   ++  +  YL  S +   +  L A    ++    ++R  +     H  E+
Sbjct: 289 -------LFKMNYYGEEAYLTQSSQLYLETCL-ASLGDVYTIQESFRAEKSHTRRHLSEY 340

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E   A  +++ L++    +I  + +   +   +   V       P +      F R 
Sbjct: 341 THIEAELAFLTFDDLLQHIETLIVKSVQYVLEDPIAGPLVKQLN---PNFKAPKAPFMRL 397

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
              D  T L+  D  +                 D  + D  +     K+   +G+     
Sbjct: 398 QYKDAITWLNEHDIKNEE-------------GEDFKFGDDIAEAAERKMTDTIGV--PIF 442

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           L R+P    S        DPR T+  ++   N+         +D +++         +++
Sbjct: 443 LTRFPVEIKSFYMKRCSDDPRVTESVDVLMPNVGEITGGSMRIDDMDEL----MAGFKRE 498

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            I  + Y     F+           G  +G +R++  +     + +    P 
Sbjct: 499 GIDTDAYY---WFIDQRKYGTCPHGGYGIGTERILAWLCDRFTVRDCSLYPR 547


>gi|109122288|ref|XP_001085923.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic [Macaca
           mulatta]
          Length = 559

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 103/334 (30%), Gaps = 43/334 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+MI    R++F +  + EI   SL      G  T        L   ++  +  +L
Sbjct: 255 ILKARSMITRCFRDHFFDRGYHEITPPSLVQTQVEGGAT--------LFKLNYFGEEAFL 306

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E      +++ L+    
Sbjct: 307 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLE 365

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +             +  E       F R    D    L   D       
Sbjct: 366 DLVCDVVDRILKSPAGSIVYE---LNPVELQPPKRPFKRMNYSDAIIWLKEHD------- 415

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 416 --IKKEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 467

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
             T+  ++   N+             E     E     K++  +        D+      
Sbjct: 468 CLTESVDVLMPNVGEIVGGSMRTSDAE-----EILAGYKREGIDPAPYYWYTDQR----K 518

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 519 YGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 552


>gi|319777274|ref|YP_004136925.1| asparaginyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038349|gb|ADV34548.1| Asparaginyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 452

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 108/348 (31%), Gaps = 34/348 (9%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE--- 65
               +R    R  +L R+ +   + +YF E+ ++  ++  +  +   E     F      
Sbjct: 122 PHVRHRTNLLRATMLIRSTLAKEVNKYFDEHGYLYFNAPIITSND-GEGAGETFVVNDGN 180

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
                   +   L  + +   +       +K++ FA  +R        H  EF M+E   
Sbjct: 181 SKDPFFGTRKATLGVTGQLHAESYAIG-FKKVYTFAPTFRAEHSNTKKHAAEFWMIEPEV 239

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A    +  +K   ++++       +             +E     + E    +    L  
Sbjct: 240 AFYELKDAIKLADDMLKS----VIKNTIKKHPAEFKFLNETVDKGLLERLNHFLKTKLSV 295

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                    R  +   A+        D  +    +      I   +  N    +  +P  
Sbjct: 296 IDY------RDAIKELAKVKDQFENQDIQFGLDLATEHERYISEKI-FNGPVAVINFPKS 348

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
             A       D      F+L    I              QR     ++ ++      +  
Sbjct: 349 FKAFYMQQNDDNETVAAFDLLVPGIGELIGGS-------QREVRYDKLLQRALEVGISQE 401

Query: 305 IDEDFLACL----TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + +L       +    SSG  +GF+RLVM VTG +NI +VI  P +
Sbjct: 402 ELQWYLDLRRFGDSG---SSGFGVGFERLVMYVTGVDNIRDVIPYPRT 446


>gi|167527404|ref|XP_001748034.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773452|gb|EDQ87091.1| predicted protein [Monosiga brevicollis MX1]
          Length = 555

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 84/282 (29%), Gaps = 22/282 (7%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHES 128
           D   KP +L  S +   +    A    ++ F   +R        H  EF M+E   A   
Sbjct: 286 DFFSKPAFLSVSGQLEAEVYACA-MTSVYTFGPTFRAENSNTTRHLAEFWMIEPEIAFCD 344

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
               MK     ++        +  +        F        A A  R   +        
Sbjct: 345 IHGDMKCAEAYVQYCCRAVLDECMADMEFLGQHFD-------ATAIKRLKVVANTPFRRL 397

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           P      +L     +   +      W           +   +      I+  YP    A 
Sbjct: 398 PYTEAIDILLQHVAEGKKKFEVAVEWGMDLGSEHERYLSEEVFKGP-IIVYDYPKDIKAF 456

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIYNETYPID 306
                 D +     ++    +       EL+   ++  R E  ++  +   +  E+Y   
Sbjct: 457 YMRLNDDGKTVAAMDILVPKV------GELVGGSQREERLEVLEQRIKDSGLDTESY--- 507

Query: 307 EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +L          +G  +GF+RLV+  TG  NI +VI  P 
Sbjct: 508 SWYLDLRRYGTVPHAGFGLGFERLVLFTTGIENIRDVIPFPR 549


>gi|149210307|ref|XP_001522528.1| hypothetical protein MGCH7_ch7g631 [Magnaporthe oryzae 70-15]
 gi|86196586|gb|EAQ71224.1| hypothetical protein MGCH7_ch7g631 [Magnaporthe oryzae 70-15]
          Length = 1454

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 59/340 (17%), Positives = 121/340 (35%), Gaps = 37/340 (10%)

Query: 24  KRNMIQSSL-----------REYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
           KR+ ++S++           R Y  E  F E +S  +  +  +E     FS      D+ 
Sbjct: 239 KRSAVRSAVADVRETTKELFRSYLKERGFHEFESPCIIEAA-SEGGANVFSA-----DYF 292

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            K ++L  SP+F  +  +A G +++FC    +R        H  EFT L+     + +  
Sbjct: 293 DKKVFLAQSPQFYKQYEIAGGRQRVFCIGPVFRAENSNTPRHMTEFTGLDMEMVIKWHYH 352

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            ++D +  +        +K  + Q          E          +A  + G  +     
Sbjct: 353 EVRDMLEGVFLHIFRELKKQCAEQIETVRSVFPAED---------FALPEPGKEVRLTFA 403

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
             + LL  +  +    V+  +  S    + L E I    G +   +LD++P         
Sbjct: 404 EGQKLLREEGPEEFRNVSDFEDMSTPQEKALGEIIRRKFGTD-FYVLDKFPESARPFYTC 462

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             P +   T  ++ +    E+ +    +  P       E E + ++K  +      + ++
Sbjct: 463 EDPENRELTNAYDFFMRGQEIMSGGQRIHKPE------EIEARMRRKGLDPNSKGLKGYV 516

Query: 311 ACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  +P   G  +G DR+V      + +    + P +
Sbjct: 517 NTFRQAGVPPHGGGGIGLDRVVQFFLNLSTVQYAAFYPRT 556


>gi|114673285|ref|XP_001138942.1| PREDICTED: asparaginyl-tRNA synthetase isoform 2 [Pan troglodytes]
          Length = 515

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 107/334 (32%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+M+    R++F +  + E+   +L      G  T        L   D+  +  +L
Sbjct: 212 ILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 263

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E      +++ L+    
Sbjct: 264 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLE 322

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +          NP  +P          R    D    L   D       
Sbjct: 323 DLVCDVVDRILKSPAGSIVHELNPNFQPPKRPF----KRMNYSDAIVWLKEHDVK----- 373

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 374 ----KEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 423

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++   N+         +   E     E     K++  + T      D+      
Sbjct: 424 RLTESVDVLMPNVGEIVGGSMRIFNSE-----EILAGYKREGIDPTPYYWYTDQR----K 474

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 475 YGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 508


>gi|119195055|ref|XP_001248131.1| hypothetical protein CIMG_01902 [Coccidioides immitis RS]
          Length = 529

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 114/391 (29%), Gaps = 54/391 (13%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS 52
           +  IP         H R R          R+         F       FI++    +  S
Sbjct: 142 LRTIP---------HLRFRTPFNSLLSRFRSECIYQATNVFHSRPGLNFIQVQPPLITSS 192

Query: 53  ---PGNETHI---RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
                 E      R  + E   +++ R P YL  S +   +   AA    ++  +  +R 
Sbjct: 193 DCEGAGEVFRVSPREAAAEGEDEEYFRAPKYLTVSSQLHLEAY-AADLGNVWTLSPTFRA 251

Query: 107 GEQG-CLHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
            +     H  EF MLE         ++L K   + IR   E       + +        E
Sbjct: 252 EKSDTPRHLSEFYMLEAELNFVNDLDELTKFVESFIRELTEKLYNTPVARELFTAKRSGE 311

Query: 165 PEY-ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA--QQAGIRVAHDDTWSDIFSRI 221
               +  +E   R+  +    T       +   L   A  +   +      +W       
Sbjct: 312 SGRTVVNSEVTERWKGLMGAATWPRITYTEAIELLQNASMKSDKVEFKSCPSWPAGIQVE 371

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALAN------IYPADPRFTKRFELYACNI-ELCNA 274
             + +   +G      +  YP                  +      F+L    + E+   
Sbjct: 372 HEKYLVSTVGNGAPIFITDYPKALKPFYMAPSGTQSTDPEKETVACFDLIMPKVCEVVGG 431

Query: 275 CDELL--DPIEQRHRFEKEMQEK------KKIYNETYPI---DEDF-----LACLT--EM 316
                  + + Q  R  + ++ +          + TYP    DED       A L     
Sbjct: 432 SLREHRLENLIQNMREHEMLRARPNEGSSVASDDMTYPFLRPDEDLGSLRWYADLRRWGS 491

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               G  +GFDR +  + G  +I +V+  P 
Sbjct: 492 APHGGFGLGFDRFLSYLAGVGSIRDVVPFPR 522


>gi|322495036|emb|CBZ30339.1| putative asparaginyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 884

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 55/340 (16%), Positives = 105/340 (30%), Gaps = 41/340 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+ +    RE+F   Q+ E+   +L      G  T        L    +  +  YL
Sbjct: 566 VLKVRHELLRVFREHFWSRQYYEVTPPTLVQTQVEGGST--------LFEVLYYGEKAYL 617

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +    + + A    ++C   ++R        H  EFT LE            +D +
Sbjct: 618 TQSSQLYL-ESVTASLGNVYCCMPSYRAERSKTKRHLSEFTHLEVEY----DVCSFEDLL 672

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           N +        + +           +  + I            D       P +P R L 
Sbjct: 673 NRLEDMLCTVIRTVIEHVGDLVAMLNPSQLIDPNGNVR-----DPANYKFTPKRPFRRLR 727

Query: 198 YLQAQQ-------AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALA 249
           Y  A Q                 + +  +      +   LG      +  +PA   S   
Sbjct: 728 YADAIQFCNENGILNTETGKPFEFGEDITDQPERAMVAKLGE--FVFMTHFPASMKSFYM 785

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKKIYNETYPIDE 307
              P DP  T+          L     E+L    + ++F++  +  +++ +   TY    
Sbjct: 786 QRDPDDPTLTESV------DVLAPGIGEVLGGSMRMYKFDELLDAYKREGLDASTYYWYT 839

Query: 308 DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           D            G  +G +RL++ +   +++ +    P 
Sbjct: 840 D--QRRYGGAPHGGFGLGVERLLVWMLNLDSVKDACLYPR 877


>gi|195050025|ref|XP_001992811.1| GH13480 [Drosophila grimshawi]
 gi|193899870|gb|EDV98736.1| GH13480 [Drosophila grimshawi]
          Length = 558

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 109/354 (30%), Gaps = 54/354 (15%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           N D     R  +++          R+++  + R ++ E  + E+   +L      G  T 
Sbjct: 235 NPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRSHYFERGYTEVTPPTLVQTQVEGGST- 293

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L    +  +  YL  S +   +  L A    +F  A ++R  +     H  E+
Sbjct: 294 -------LFKMQYFNEEAYLTQSSQLYLETCLPA-LGDVFTIAQSYRAEQSRTRRHLAEY 345

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++E L+    +++    +   +                   +      + 
Sbjct: 346 THIEGECPFITFEDLLNRLEDLVCDVVDRVLK-------------------SPWGYLVKE 386

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCC 235
            N D         + +        ++  +       +   +        K+     IN  
Sbjct: 387 LNPDFKPPTKPFRRMEYADAIKWLKEHNVTKDDGTFYEFGEDIPEAPERKMTDT--INEP 444

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            +L ++PA   S   +    D R T+  + L     E+      + D  E    +E    
Sbjct: 445 ILLIKFPAEIKSFYMSRCKEDQRLTESVDVLLPNVGEIIGGSMRIYDSEELMKGYE---- 500

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++ I    Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 501 -REGIDPTPYYWYTD--QRVYGTTPHGGYGLGLERFLCWLLNRYHIREVCLYPR 551


>gi|238809945|dbj|BAH69735.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 456

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 108/348 (31%), Gaps = 34/348 (9%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTE--- 65
               +R    R  +L R+ +   + +YF E+ ++  ++  +  +   E     F      
Sbjct: 126 PHVRHRTNLLRATMLIRSTLAKEVNKYFDEHGYLYFNAPIITSND-GEGAGETFVVNDGN 184

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
                   +   L  + +   +       +K++ FA  +R        H  EF M+E   
Sbjct: 185 SKDPFFGTRKATLGVTGQLHAESYAIG-FKKVYTFAPTFRAEHSNTKKHAAEFWMIEPEV 243

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A    +  +K   ++++       +             +E     + E    +    L  
Sbjct: 244 AFYELKDAIKLADDMLKS----VIKNTIKKHPAEFKFLNETVDKGLLERLNHFLKTKLSV 299

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                    R  +   A+        D  +    +      I   +  N    +  +P  
Sbjct: 300 IDY------RDAIKELAKVKDQFENQDIEFGLDLATEHERYISEKI-FNGPVAVINFPKS 352

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
             A       D      F+L    I              QR     ++ ++      +  
Sbjct: 353 FKAFYMQQNDDNETVAAFDLLVPGIGELIGGS-------QREVRYDKLLQRALEVGISQE 405

Query: 305 IDEDFLACL----TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             + +L       +    SSG  +GF+RLVM VTG +NI +VI  P +
Sbjct: 406 ELQWYLDLRRFGDSG---SSGFGVGFERLVMYVTGVDNIRDVIPYPRT 450


>gi|303389614|ref|XP_003073039.1| aspartyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302183|gb|ADM11679.1| aspartyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 473

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 105/334 (31%), Gaps = 36/334 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R      + +    R+Y   N F+EI +  L   S     ++  FS      D+ +K  +
Sbjct: 166 RATFRVIDGVMFFFRDYLRRNGFVEIKTPKLIGSSSEGGANL--FSV-----DYFKKKAF 218

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDC 136
           +  SP+   +  +A G ++++   H +R  E     +  EF  L+      +    +   
Sbjct: 219 MAQSPQLYKQMAVAGGLKRVYEIGHVYRAEESNINRYLSEFVGLDMEMEISTDYNDVIKF 278

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +  +     +K +S +      F   E +                    P       
Sbjct: 279 IHSMFVSIFDNLKKEYSEELDTIRSFHRFEDVKY---------------NREPVVLTHRE 323

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                   G+ + + D ++    + L   ++    ++   ++  YP            + 
Sbjct: 324 CVDLLLGEGVEMGYGDDFNSENEKRLGSIVKRIHDVD-IFVIKDYPISARPFYTYRNEEK 382

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQ-RHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
             T+ ++      E+ +    +    +  R+  E  +                +L     
Sbjct: 383 GITRSYDFILRGEEILSGAQRVNVYEDLVRYVSEHGISPSSLGG---------YLESFKY 433

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +P   G  +G +R++    G  +I      P  
Sbjct: 434 GVPPHGGCGIGLERVMKAYFGMGDIRCFSLFPRD 467


>gi|254172086|ref|ZP_04878762.1| asparaginyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033982|gb|EEB74808.1| asparaginyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 430

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 108/350 (30%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +    R    +    +  +  +  + RE+ +++ + E+    L       T      
Sbjct: 115 LDVRHLHLRS--PKVASIMKVKATLVQAAREWLLQDGWYEVFPPILV------TGAVEGG 166

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           + L    +  +  YL  S +   +  +    EK++    ++R  +     H  EF  LE 
Sbjct: 167 STLFKLKYFDRYAYLSQSAQLYLEAAIFG-LEKVWSLTPSFRAEKSRTRRHLTEFWHLEL 225

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A      +MK    ++    + A +                   +  E F +      
Sbjct: 226 EAAWMDLWDIMKVEEELVSYMVQRALEL----------------RKSEIETFRKDLTTLK 269

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                 P +          Q  G+ +   +       R+L E+ E          +  YP
Sbjct: 270 NAVPPFP-RISYDEAIEVLQSKGVEIEWGEDMGADEERVLTEEFEA------PFFVYGYP 322

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKKIY 299
               +      P DPR     +     +       E++   ++   ++K  +   ++ + 
Sbjct: 323 KGIKAFYMKEDPEDPRKVLAAD-----MLAPEGYGEIIGGSQREDDYDKLVQRILEEGMN 377

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E Y     +L          SG  +G +RLV  V   ++I      P +
Sbjct: 378 PEDYQ---WYLDLRKYGSVPHSGFGLGLERLVAWVLKLDHIRWATLFPRT 424


>gi|195115232|ref|XP_002002168.1| GI17232 [Drosophila mojavensis]
 gi|193912743|gb|EDW11610.1| GI17232 [Drosophila mojavensis]
          Length = 558

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 115/352 (32%), Gaps = 50/352 (14%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           + D     R  +++          R+++  + R ++++  + E+   +L      G  T 
Sbjct: 235 HPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRAHYLDRGYNEVTPPTLVQTQVEGGST- 293

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L    +  +  YL  S +   +  L A    +F  A ++R  +     H  E+
Sbjct: 294 -------LFKMQYFGEEAYLTQSSQLYLETCLPA-LGDVFTIAQSYRAEQSRTRRHLAEY 345

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++E L+    ++I    +   +  + +     NP  +P      + F R 
Sbjct: 346 THIEAECPFLTFEDLLDRIEDLICDVVDRILKSPWGYIVKELNPDFKPP----TKPFKRM 401

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
             +D    L   + P     + +             + +        K+     IN   +
Sbjct: 402 EYVDAIKWLKENNVPKEDGTFYE-------------FGEDIPEAPERKMTDT--INEPIL 446

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           L R+PA   S   +    D R T+  + L     E+      + D  E           +
Sbjct: 447 LIRFPAEIKSFYMSRCQDDQRLTESVDVLLPNVGEIVGGSMRIFDNDEILK-----AYAR 501

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + I    Y    D    +       G  +G +R +  +    +I +V   P 
Sbjct: 502 EGIDPAPYYWYTD--QRVYGTMPHGGYGLGLERFLCWLLNRYHIRDVCLYPR 551


>gi|303284429|ref|XP_003061505.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456835|gb|EEH54135.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 592

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 91/293 (31%), Gaps = 25/293 (8%)

Query: 62  FSTELIIQDH----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPE 116
           F T     D+      +P +L  S + + +    A    ++ F   +R        H  E
Sbjct: 312 FRTADGKVDYAKDFFGEPTFLTVSGQLNVETYACAMS-SVYTFGPTFRAENSNTTRHLAE 370

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           F M+E   A       M+   + ++       +            + +       EA  R
Sbjct: 371 FWMIEPEIAFADLADDMRCAEDYVQYCLRHVLEHCRGDLEFISKMYDK-------EALER 423

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
             ++               LL  +A   G    +   W    +      +   +      
Sbjct: 424 VKHVSETPFGRVSYTEAIDLL-EKAVADGKTFVYPVEWGIDLATEHERFLAEEI-FKRPV 481

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEK 295
           I+  YP    A       D +     ++    +       EL+   ++  R +  E + +
Sbjct: 482 IVYNYPKDIKAFYMRLNEDNKTVAAMDVLVPKV------GELIGGSQREERIDNLEARMR 535

Query: 296 KKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +   +      E +L          SG  +GF+RLV+  TG  NI +VI  P 
Sbjct: 536 EIGLDPEEY--EWYLDLRRYGTVVHSGFGLGFERLVLFCTGMENIRDVIPFPR 586


>gi|118795020|ref|XP_321875.3| AGAP001276-PA [Anopheles gambiae str. PEST]
 gi|116116576|gb|EAA01739.3| AGAP001276-PA [Anopheles gambiae str. PEST]
          Length = 474

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 47/357 (13%), Positives = 107/357 (29%), Gaps = 43/357 (12%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI-RAFS 63
             H R R          R+    +  EY     F++I +  L  +      E  + +  +
Sbjct: 132 HLHLRSRVNSMASTFRVRHEATRAFNEYLQRGGFVQIHTPVLTSNDCEGAGEAFLVKPLN 191

Query: 64  TELII----------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +L+             +  +  +L  S +    + +A G +K++ F   +R       +
Sbjct: 192 EQLLKGMAKENVPLEHAYFDRATFLTVSGQLHL-EAMAHGLDKVYTFGPTFRAENCKSNI 250

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  EF MLE   A       +   +  +  +   +     +         +  +     E
Sbjct: 251 HLSEFYMLELEEAFMGTLDELTHRVEDMLKSVTKSVIDRSAADLSVVRKSNSQDGGGQLE 310

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              R+ +             D  +  LQA +A ++           ++     +  +   
Sbjct: 311 DCFRWIDKPFPRLTY-----DEAMHILQANEAKLKSPVRREEG--INKEQELFLVEHC-- 361

Query: 233 NCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +  +P    +        +P      +L   ++          D  ++  R    
Sbjct: 362 QSPVFVCLWPKAIKSFYMRENAQNPSLVDALDLLVPHVGELVGGSVREDSYDRLRR---- 417

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                        + + +L         ++G  MGF+R +  +   +N+ +VI  P 
Sbjct: 418 -------KLPNADVLQWYLELRKFGSVTTAGFGMGFERYLAWLLNVHNVKDVIPFPR 467


>gi|149235766|ref|XP_001523761.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452740|gb|EDK46996.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 470

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 109/363 (30%), Gaps = 54/363 (14%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNET 57
           +  +P+     +        F   R+ +++ + ++F  N F ++    +  S      ET
Sbjct: 139 LRTLPA----LKHRTSTIASFYRLRSFLETQMIDFFNINDFTKVTPPIITSSDCEGAGET 194

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPE 116
               F       +   K  YL  S +    + LA    +++     +R        H  E
Sbjct: 195 ----FKI-AESANFFEKTTYLTVSTQLHI-EALAMALNRVWTLTPCFRAENSNTTRHLCE 248

Query: 117 FTMLEWYRAH-ESYEQLMKDCMNIIRCAAEVANQKIFSF----QNVNCNPFSEPEYITVA 171
           F MLE   +H E  EQL+    ++I+ +          +            S    IT  
Sbjct: 249 FWMLEAEISHVEDLEQLLNFTEDMIKYSTRKLIDLKKEYLRGVYLEEELVQSRWAAITKQ 308

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E + R    D    L+   +     L                + D       + +     
Sbjct: 309 EKWPRMTYTDAIEYLNKLRKDSEEKLE---------------FGDSLLLEHEKYLAK--- 350

Query: 232 INCCTILDRYPAPESALANIY-----PADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
            +    +  YPA       +      P  P       L+    EL        +  E   
Sbjct: 351 -DGPIFITDYPAEMKPFYMLKSAKFDPEKPTVACYDLLFPDFGELAGGSLREHNYEELVE 409

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
                   K  +  E      D+   L         G  MG++R V  ++G +N+ +VI 
Sbjct: 410 -----SMGKHGMDVEEM----DWYTTLRKNGTIPHGGFGMGWERFVTYLSGHDNVKDVIP 460

Query: 345 TPF 347
            P 
Sbjct: 461 FPR 463


>gi|85114715|ref|XP_964741.1| aspartyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28926534|gb|EAA35505.1| aspartyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|38636451|emb|CAE81986.1| related to aspartate--tRNA ligase [Neurospora crassa]
          Length = 594

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 111/334 (33%), Gaps = 37/334 (11%)

Query: 21  FLLKRNMIQSSL-----------REYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
            + KR  +Q ++           R Y   + F E +   L  +  +E     F       
Sbjct: 268 IMHKRAPVQQAIADIRMEVKDLFRSYLKSHGFKEFEPPCLIGAA-SEGGANVFRMP---- 322

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHES 128
            +  K  +L  SP+F  +  +A G +++F     +R        H  EFT L+       
Sbjct: 323 -YFDKEAFLAQSPQFYKQFEIAGGRKRVFSIGPVFRAENSNTPRHMTEFTGLDLE----- 376

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
               M+   +       +    +  F+ +     +E E +        +   + G  +  
Sbjct: 377 ----MEIKKDYREVLLMLEGVLLHIFRGIKERCAAEIELVRSVYPAEEFLLPEPGKEVRL 432

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                + LL  +  +    V  D+  S    + L   +      +   +LD++P      
Sbjct: 433 TFAEGQKLLREEGPEEFRNVTDDEDMSTPQEKALGAIVRKKFNTD-FYVLDKFPEGARPF 491

Query: 249 ANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                 A+P+ T  F+ +    E+ +    + DP E   R  +      K  +      +
Sbjct: 492 YAKLDDANPKVTNAFDFFLRGQEILSGGQRINDPEELEARIIQ------KGVDPKSAGIK 545

Query: 308 DFLACL--TEMPQSSGIAMGFDRLVMLVTGANNI 339
           D++       +P   G  +G DR+V       ++
Sbjct: 546 DYVDVFRQAGVPAHGGGGIGLDRVVAWFLNLPSV 579


>gi|213421202|ref|ZP_03354268.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 252

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 17/107 (15%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 150 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSKILAGIRQFMVARGFMEVETP 209

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
            +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G 
Sbjct: 210 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGF 252


>gi|195584094|ref|XP_002081850.1| GD11238 [Drosophila simulans]
 gi|194193859|gb|EDX07435.1| GD11238 [Drosophila simulans]
          Length = 460

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 62/362 (17%), Positives = 114/362 (31%), Gaps = 59/362 (16%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R       +  R+  Q +L +Y  E  F++I++  L  +          F  + 
Sbjct: 124 HLHLRSRVDFVAAQMRVRHKAQKALHDYMDEQDFVQINTPLLTTNDCEGAGE--VFRVQP 181

Query: 67  IIQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
             QD               +    ++L  S +    + +  G  K +  + A+R      
Sbjct: 182 DSQDLLKQMNRPNIPIEQSYFDSKVFLSVSGQLHL-EAMTYGLGKTYTLSPAFRAENSKS 240

Query: 111 CLHQPEFTMLEWYRAH-ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
            LH  EF M E   AH E  E+L +    +++       +      +      +    + 
Sbjct: 241 PLHLAEFYMFEAELAHLEELEKLARFIEQMLKSVTSRLLETSGEDLSFCQRNSNSNSDLP 300

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +   +  + D                    Q+    +    + ++ FS+     +  +
Sbjct: 301 WLQVPWKIMSYD--------------EALQVLQENKDSLKTPISLNEGFSKDQELFLVAH 346

Query: 230 LGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHR 287
            G      +  +PA +          +P      +L    + ELC       DP   +  
Sbjct: 347 CG--APVFVVDWPAQQKPFYMKVSRTNPNRVHALDLLMPAVGELCGGSLRESDPAILKSH 404

Query: 288 FEKEMQEKKKIYNETYPID-EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                           P D E ++         + G  MGF+R + LVTG  NI +VI  
Sbjct: 405 -------------PQLPKDLEWYVDLRKYGGVPTGGFGMGFERYLQLVTGVKNIRDVIPF 451

Query: 346 PF 347
           P 
Sbjct: 452 PR 453


>gi|57640694|ref|YP_183172.1| asparaginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|73919760|sp|Q5JHC1|SYN_PYRKO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|57159018|dbj|BAD84948.1| asparaginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 431

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 112/352 (31%), Gaps = 48/352 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           +  +    R    +    +  +  +  + RE+ +++ + E+    L      G  T    
Sbjct: 115 LDVRHLHLRS--PKVAAIMKVKGTLMQAAREWLLQDGWYEVFPPILVTGAVEGGAT---- 168

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L    +  +  YL  S +   +  +    EK++    ++R  +     H  EF  L
Sbjct: 169 ----LFKLKYFDRYAYLSQSAQLYLEAAIFG-LEKVWSLTPSFRAEKSRTRRHLTEFWHL 223

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A      +MK    ++        Q+    +      + + +  T+  A   +  I
Sbjct: 224 ELEAAWMDLWDIMKVEEELVSYMV----QRTLELRKKEIELYRKDDIKTLKNAVPPFPRI 279

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                +D              Q  G+ +   +       R+L E+ E          +  
Sbjct: 280 SYDEAID------------ILQSKGVNIEWGEDMGADEERVLTEEFES------PFFVYG 321

Query: 241 YPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YP    +      P DPR     +     +       E++    QR   +   +  ++I 
Sbjct: 322 YPKHIKAFYMKEDPEDPRKVLAAD-----MLAPEGYGEIIGGS-QRE--DDYDKLVQRIL 373

Query: 300 NETY-PID-EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E   P D E +L          SG  +G +RLV  V   +++      P +
Sbjct: 374 EEGMKPEDYEWYLDLRKYGSVPHSGFGLGLERLVAWVLKLDHVRWATLFPRT 425


>gi|156040994|ref|XP_001587483.1| hypothetical protein SS1G_11475 [Sclerotinia sclerotiorum 1980]
 gi|154695859|gb|EDN95597.1| hypothetical protein SS1G_11475 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 968

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 90/332 (27%), Gaps = 79/332 (23%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ I +  R Y     FIEI +  LQ     E+    F       ++  +  +L
Sbjct: 353 QAIFRIQSGICNLFRSYLDTQGFIEIHTPKLQG-GATESGATVFE-----LNYFGRSAFL 406

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             SP+ + +  +AA  E+++     +R  +     H  E+T L+   A E +       +
Sbjct: 407 AQSPQLAKQMCIAADFERVYEIGAVFRAEDSNTPRHLTEYTGLDLEMALEEHYHEALTLI 466

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +                                          D     +  D   R  +
Sbjct: 467 D----------------------------------------EEDGSVPSETEDLSTRAEI 486

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
            L A                 + +      P+   +  T                     
Sbjct: 487 RLGALVKEKYHTDYYILDKFPASVRPFYTMPDPDDDRFTNSFD----------------- 529

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
                 ++    E+      + D      R ++     K +  E+ P   ++L       
Sbjct: 530 ------IFMRGQEILTGGQRIHDAEFLEKRMKQ-----KGVKPESMP---EYLEGFRWGA 575

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           P  +G  +G +RL  L     NI      P  
Sbjct: 576 PPHAGCGIGLERLTYLFLSLGNIRLASLFPRD 607


>gi|14590172|ref|NP_142237.1| asparaginyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|20139874|sp|O57980|SYN_PYRHO RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|109156926|pdb|1X54|A Chain A, Crystal Structure Of Asparaginyl-Trna Synthetase From
           Pyrococcus Horikoshii Complexed With
           Asparaginyl-Adenylate
 gi|109156927|pdb|1X55|A Chain A, Crystal Structure Of Asparaginyl-Trna Synthetase From
           Pyrococcus Horikoshii Complexed With
           Asparaginyl-Adenylate Analogue
 gi|109156928|pdb|1X56|A Chain A, Crystal Structure Of Asparaginyl-Trna Synthetase From
           Pyrococcus Horikoshii
 gi|3256630|dbj|BAA29313.1| 434aa long hypothetical asparaginyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 434

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 57/352 (16%), Positives = 106/352 (30%), Gaps = 49/352 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           +  +    R    +    +  +  +  + RE+ +++ + E+    L      G  T    
Sbjct: 119 LDYRHLHIRT--PKASAIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVEGGAT---- 172

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L    +  K  YL  S +   +  +    EK++    ++R  +     H  EF  L
Sbjct: 173 ----LFKLKYFDKYAYLSQSAQLYLEAAIFG-LEKVWSLTPSFRAEKSRTRRHLTEFWHL 227

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A      +MK    ++    +   +       +                       
Sbjct: 228 ELEAAWMDLWDIMKVEEELVSYMVQRTLELRKKEIEMFR--------------------- 266

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D  TTL N + P   + Y +A         +  W D         +      +    +  
Sbjct: 267 DDLTTLKNTEPPFPRISYDEAIDILQSKGVNVEWGDDLGADEERVLTEE--FDRPFFVYG 324

Query: 241 YPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YP    +      P DPR     +     +       E++    QR   +   +   +I 
Sbjct: 325 YPKHIKAFYMKEDPNDPRKVLASD-----MLAPEGYGEIIGGS-QRE--DDYDKLLNRIL 376

Query: 300 NETY-PID-EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            E   P D E +L          SG  +G +RLV  V   ++I      P +
Sbjct: 377 EEGMDPKDYEWYLDLRRYGSVPHSGFGLGVERLVAWVLKLDHIRWAALFPRT 428


>gi|256395047|ref|YP_003116611.1| tRNA synthetase class II (D K and N) [Catenulispora acidiphila DSM
           44928]
 gi|256361273|gb|ACU74770.1| tRNA synthetase class II (D K and N) [Catenulispora acidiphila DSM
           44928]
          Length = 430

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 52/331 (15%), Positives = 94/331 (28%), Gaps = 46/331 (13%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
                   +  R       F EI +  +  S   E+    F       D   +  YL  S
Sbjct: 136 FQITAASIAGFRTALDALNFTEIHTPKIVGSA-TESGANVF-----ALDWFGRKAYLAQS 189

Query: 82  PEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHE-SYEQLMKDCMNI 139
           P+F  K+ +    E+++     +R        H  ++T L+        +  +M      
Sbjct: 190 PQFF-KQAMVGVFERVYETGPVFRAEPSDTARHLAQYTSLDAELGFITDHRDVMAVVREA 248

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +        ++  +  ++                FA    +      D     +R L + 
Sbjct: 249 LAGMVTTVAERAPAAVDLLGVKLPTVPDQIPEIHFADAMKMLGEDEPDLSPANERDLSHW 308

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD-PRF 258
             ++ G                                +  YP  +         D P +
Sbjct: 309 ALREFGSEFL---------------------------FVTGYPMTKRPFYTHAQPDRPNY 341

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           +  F+L    +EL      L        R+E  +         T    E +LA     MP
Sbjct: 342 SNSFDLIFRGLELITGGQRLH-------RYEDYIAALTARGEPTNAY-EGYLANFKHGMP 393

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              G A+G +R  M +T A+N+      P  
Sbjct: 394 PHGGFALGLERWTMRLTEADNLRRTALFPRD 424


>gi|313829496|gb|EFS67210.1| conserved domain protein [Propionibacterium acnes HL063PA2]
          Length = 83

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRL 329
           +  A  EL+DP+ QR RF  +         E   +DEDFL  L   MP S G+ MG DRL
Sbjct: 1   MGTAYTELVDPVIQRERFTAQSLLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRL 60

Query: 330 VMLVTGANNINEVIWTPFSQSN 351
           VM++T A +I E I  P  +  
Sbjct: 61  VMMLTNA-SIRETISFPLVRPR 81


>gi|125808696|ref|XP_001360836.1| GA19868 [Drosophila pseudoobscura pseudoobscura]
 gi|54636008|gb|EAL25411.1| GA19868 [Drosophila pseudoobscura pseudoobscura]
          Length = 460

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 118/364 (32%), Gaps = 63/364 (17%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------ 58
             H R R       +  R+  Q ++ +Y  E  F++I++  +  +      E        
Sbjct: 124 HLHLRSRVDYVAAQMRIRHKAQKAIHDYMDELDFVQINTPLMTTNDCEGAGEVFRVQPDS 183

Query: 59  -------IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
                   R        Q +    ++L  S +    + +  G    +C A A+R      
Sbjct: 184 EELLKQMARPNV--PAEQSYFDSKVFLSVSGQLHL-EAMTYGLGNTYCLAPAFRAENSKS 240

Query: 111 CLHQPEFTMLEWYRAHESY----EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
            LH  EF M E   AH        + ++  +  I       + +   F   N N  S+  
Sbjct: 241 PLHLAEFYMFEAELAHLDELEKLAKFIEQMLKSITNRVLETSSEDLHFCQRNANASSDLP 300

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
           ++TV      Y               D  L  LQA +  ++          F++     +
Sbjct: 301 WLTVPWTIMSY---------------DDALHVLQANKESLKTPISLDEG--FTKDQELFL 343

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQR 285
             + G     ++D     +     I   +P      +L    + ELC       D     
Sbjct: 344 VSHCG-TPVFVVDWPTQQKPFYMKITRNNPDRVHALDLLMPAVGELCGGSLRESDAATLS 402

Query: 286 HR--FEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
               F K++         ++ +D   L        + G  MGF+R + LVTG  NI +VI
Sbjct: 403 SHPQFPKDL---------SWYVD---LRK-YGGIPTGGFGMGFERYLQLVTGVKNIRDVI 449

Query: 344 WTPF 347
             P 
Sbjct: 450 PFPR 453


>gi|312373072|gb|EFR20897.1| hypothetical protein AND_18332 [Anopheles darlingi]
          Length = 549

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 114/360 (31%), Gaps = 66/360 (18%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           + D     R  +++          R+++  + R ++ +  + E+   +L      G  T 
Sbjct: 226 HPDVQLDNRHIMIRGENTSKILKMRDVVMQAFRSHYFDRGYTEVTPPTLVQTQVEGGST- 284

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   D+  +  YL  S +   +  + A    +FC A ++R  +     H  E+
Sbjct: 285 -------LFKLDYFGEEAYLTQSSQLYLETCIPA-LGDVFCVAQSYRAEQSRTRRHLAEY 336

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           + +E      ++E+L+    +++    +   +  + +     NP   P            
Sbjct: 337 SHIEGECPFITFEELLNRLEDLVVDVVDRVLKSPWGYMVQELNPGFVPPKRPFRRMNY-- 394

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
                             +++L+             + +        K+     IN   +
Sbjct: 395 ---------------ADAIVWLKENNVTKEDGTFYEFGEDIPEAPERKMTDT--INEPIM 437

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFEL-------YACNIELCNACDELLDPIEQRHRFE 289
           L R+PA   S        DPR T+  +                   DELL+         
Sbjct: 438 LCRFPAEIKSFYMAKCEDDPRLTESVDALLPNVGEIVGGSMRSWKYDELLEGY------- 490

Query: 290 KEMQEKKKIYNET--YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               +++ I  +   + +D+     +       G  +G +R +  +    +I EV   P 
Sbjct: 491 ----KREGIDPKPYYWYVDQR----VYGTQPHGGYGLGLERFLCWLLNRYHIREVCLYPR 542


>gi|148377568|ref|YP_001256444.1| asparaginyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|148291614|emb|CAL59000.1| Asparaginyl tRNA synthetase [Mycoplasma agalactiae PG2]
          Length = 452

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 58/347 (16%), Positives = 115/347 (33%), Gaps = 36/347 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           H R R       +L R+ +   + ++F EN F+   +  +  +   E     F    +  
Sbjct: 123 HLRHRTNLLRCVMLIRSTLALEIHKFFAENGFLNFSAPIITSND-GEGAGEQF---YVND 178

Query: 70  DHIRKPLY------LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
            +  +P +      L  + +   +       E+++ FA  +R        H  EF M+E 
Sbjct: 179 GNKEQPFFGNNNATLGVTGQLHAESYAIG-FERVYTFAPTFRAEHSNTKKHAAEFWMIEP 237

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    ++++     +++   +    K             E EY+      +    ++ 
Sbjct: 238 EVAFYDLKKIINLANKLLKNVIKNTINKHP----------REFEYLQNNVDSSLLERLNS 287

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                      +  L    +        D  +   F+    + +   +       +  +P
Sbjct: 288 FIKKKLMILDYKDALVELEKVKDKFENKDIKFGLDFATEHEKYLAEEIAHGP-IAIINFP 346

Query: 243 APESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
               A       D +    F+L    I EL               R  +    K+++   
Sbjct: 347 KSFKAFYMHQNNDNQTVAAFDLLVPGIGELIGGSQREARYGRLLERALEVGISKEEL--- 403

Query: 302 TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + +D   L        S+G  +GF+RLVM VTG +NI +VI  P +
Sbjct: 404 QWYLD---LRRFGHSG-SAGFGIGFERLVMYVTGVDNIRDVIPYPRT 446


>gi|330721813|gb|EGG99790.1| Lysyl-tRNA synthetase-related protein [gamma proteobacterium
           IMCC2047]
          Length = 103

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
            +RFELY   +EL N   EL D  EQ  RF  ++ E+K+    T P D+  LA L + MP
Sbjct: 11  AQRFELYVEGVELANGYYELTDADEQLQRFMADLDERKRRGLVTLPADQKLLAALQSGMP 70

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +G+A+G DRL+ML+ GA++I +VI  P  
Sbjct: 71  DCAGVALGLDRLLMLMAGADSIRDVITFPTD 101


>gi|317121888|ref|YP_004101891.1| asparaginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591868|gb|ADU51164.1| asparaginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 430

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 96/314 (30%), Gaps = 42/314 (13%)

Query: 40  QFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIF 98
            F+ +D+  L  S P   T++  F T     D+     YL  S +   +    A   K++
Sbjct: 148 GFVRVDAPILTPSAPEGTTNL--FET-----DYFGDKAYLSQSGQLYMEAACMA-LGKVY 199

Query: 99  CFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
           C    +R  +     H  EF MLE   A  ++E  +     ++R       ++       
Sbjct: 200 CLGPTFRAEQSKTRRHLLEFWMLEPEAAFFTHEDNVALQERLVRQVVLAVLERCP----- 254

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
                                  D        + P   + Y +A +          W + 
Sbjct: 255 ---------------RELETLGRDPEHLRRQVEGPFARITYDEALRILDERGLGLPWGED 299

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIE--LCNA 274
           F       +  + G      ++R+P    +      P  P      +L A +    +   
Sbjct: 300 FGAPHETALSQHFG--RPVFVERFPTRVKAFYMEPDPQRPEVALCADLLAPDGYGEIIGG 357

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVT 334
              + D      R ++    ++ +    + ID             +G  +G +R V  + 
Sbjct: 358 SQRISDLDLLLRRIDEHGLSREAL---AWYIDLR----RYGSVPHAGFGLGIERTVAWIC 410

Query: 335 GANNINEVIWTPFS 348
           G  ++ E I  P  
Sbjct: 411 GLEHVREAIPFPRL 424


>gi|156849133|ref|XP_001647447.1| hypothetical protein Kpol_1018p126 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118133|gb|EDO19589.1| hypothetical protein Kpol_1018p126 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 554

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 49/353 (13%), Positives = 105/353 (29%), Gaps = 51/353 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            +  R  +  ++R  ++E    E+    +      G  T 
Sbjct: 230 DPSLLLDQRHLALRGETLSAVMKVRASLLKAIRRVYIEEDITEVTPPCMVQTQVEGGST- 288

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   D+  +  YL  S +   +  L A    ++C   ++R  +     H  E+
Sbjct: 289 -------LFKLDYYGEEAYLTQSSQLYLETCLPA-LGDVYCIQESFRAEKSHTRRHLSEY 340

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E   A   +  L++    +I  + +   +   +   V                    
Sbjct: 341 THIEAELAFIDFNDLLQHIETLIVKSIQYVLEDPIAGPLVKQLN---------------- 384

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
                        +    + +LQ         +D  + D  +     K+   +G+    +
Sbjct: 385 PGFVAPKGPFMRLEYKDAITWLQEHGIKNEEGNDFQFGDDIAEAAERKMTDTIGV--PIL 442

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           L R+P    S        DPR T+  + L     E+      +    E    F      +
Sbjct: 443 LIRFPVEIKSFYMKRCSDDPRVTESVDVLMPTVGEITGGSMRIESTEELMAGFT-----R 497

Query: 296 KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + I ++ Y     F+           G  +G +R++  +     + +    P 
Sbjct: 498 EGIDSKAYY---WFIDQRKYGTCPHGGYGLGTERILAWLCDRFTVRDCSLYPR 547


>gi|328950741|ref|YP_004368076.1| Asparaginyl-tRNA synthetase [Marinithermus hydrothermalis DSM
           14884]
 gi|328451065|gb|AEB11966.1| Asparaginyl-tRNA synthetase [Marinithermus hydrothermalis DSM
           14884]
          Length = 439

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 55/332 (16%), Positives = 107/332 (32%), Gaps = 31/332 (9%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  R+ I+ ++ ++  E  FI  D+  L  +    T    F  EL   D      YL 
Sbjct: 130 AVLRIRDEIERAIHDFLHERGFIRFDAPILTPNAVEGTT-DLFEVELFDGD----KAYLS 184

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S +   +    A   +++ F   +R        H  EF M+E   A  ++E+ M+   +
Sbjct: 185 QSGQLYAEAGALA-FGRVYTFGPTFRAERSKTRRHLLEFWMVEPEVAFMTHEENMQLQED 243

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++         ++   +                 A   Y  I     +   ++  +    
Sbjct: 244 LVSYLV----GRVLENRRTELEVLGRDVSRLEPAANGNYPRITYTEAVQLLEEVAKEDPD 299

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPR 257
           L              W + F       I  +   +   I+++YPA   +       ADPR
Sbjct: 300 L----------EPIPWGEDFGAPHEAAI--SRRFDRPVIVEKYPAAVKAFYMEPDDADPR 347

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF-LACLTEM 316
             K       ++       E++   E+ H  E   ++ ++        D    L      
Sbjct: 348 LVKN-----NDMLAPEGYGEIIGGSERIHDPELLRRKIREHNLPESVFDWYMDLRRF-GS 401

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +G  +G +R V  + G  ++ E +     
Sbjct: 402 VPHAGFGIGLERTVAWICGLQHVREAVPFARM 433


>gi|195151145|ref|XP_002016508.1| GL10450 [Drosophila persimilis]
 gi|194110355|gb|EDW32398.1| GL10450 [Drosophila persimilis]
          Length = 460

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 67/364 (18%), Positives = 117/364 (32%), Gaps = 63/364 (17%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH------ 58
             H R R       +  R+  Q ++ +Y  E  F++I++  +  +      E        
Sbjct: 124 HLHLRSRVDYVAAQMRIRHKAQKAIHDYMDELDFVQINTPLMTTNDCEGAGEVFRVQPDS 183

Query: 59  -------IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
                   R        Q +    ++L  S +    + +  G    +C A A+R      
Sbjct: 184 EELLKQMARPNV--PAEQSYFDSKVFLSVSGQLHL-EAMTYGLGNTYCLAPAFRAENSKS 240

Query: 111 CLHQPEFTMLEWYRAHESY----EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
            LH  EF M E   AH        + ++  +  I       + +   F   N N  S+  
Sbjct: 241 PLHLAEFYMFEAELAHLDELEKLAKFIEQMLKSITNRVLETSSEDLHFCQRNANASSDLP 300

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
           ++TV      Y               D  L  L A +  ++          F++     +
Sbjct: 301 WLTVPWTIMSY---------------DDALHVLLANKESLKTPISLDEG--FTKDQELFL 343

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQR 285
             + G     ++D     +     I   +P      +L    + ELC       D     
Sbjct: 344 VSHCG-TPVFVVDWPTQQKPFYMKITRNNPDRVHALDLLMPAVGELCGGSLRESDAATLS 402

Query: 286 HR--FEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
               F K++         ++ +D   L        + G  MGF+R + LVTG  NI +VI
Sbjct: 403 SHPQFPKDL---------SWYVD---LRK-YGGIPTGGFGMGFERYLQLVTGVKNIRDVI 449

Query: 344 WTPF 347
             P 
Sbjct: 450 PFPR 453


>gi|213410321|ref|XP_002175930.1| asparaginyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003977|gb|EEB09637.1| asparaginyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 453

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 48/366 (13%), Positives = 98/366 (26%), Gaps = 51/366 (13%)

Query: 3   QIPSQPWW-NRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGN 55
            +             R       +  R  I   LR +  E  FIE +   +  S      
Sbjct: 113 PMSEDYLRSIPHLRLRTSTMAQTMRLRASILRELRRFLDERDFIETNPPLITSSDCEGAG 172

Query: 56  ET------HIRAFSTELIIQD------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHA 103
           ET      +I+   T     D         +P +L  S +    + LA    +++    A
Sbjct: 173 ETFQVIKKNIKRNGTTKQEDDLPSTIEFFNRPAHLTVSTQL-HLEALALALNRVYTVTPA 231

Query: 104 WRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           +R  E     H  EF MLE  ++       +      +  +      +       +   +
Sbjct: 232 FRAEESKTSRHLAEFWMLELEQSFIDELDPLLHLAETLIKSVARQLLRTKHMYMESKEGY 291

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
               + ++   + R    D    +    +                   +  W        
Sbjct: 292 LTDRWQSLLNPWHRLCYDDAIHMMQRSSRC---------------WNFEPKWGTDLQSEH 336

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
            + +   +G      +  YP+ +           +      L+    E+           
Sbjct: 337 EQWLTHEVGNKPL-FVTDYPSAQKPFYMKDSTPKKSACFDLLFPEVGEVIGGS------- 388

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
                  K+ +++     +     +D            G  +G +RLV  +    N+ E 
Sbjct: 389 -----LRKDAKQELASAPKALEWYKDLRQ--YGSAPHGGFGLGIERLVSYLAREPNVREC 441

Query: 343 IWTPFS 348
           I  P +
Sbjct: 442 IPFPRT 447


>gi|75075861|sp|Q4R4Z1|SYNC_MACFA RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|67970984|dbj|BAE01834.1| unnamed protein product [Macaca fascicularis]
          Length = 558

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 52/334 (15%), Positives = 104/334 (31%), Gaps = 44/334 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+MI    R++F +  + EI   SL      G  T        L   ++  +  +L
Sbjct: 255 ILKARSMITRCFRDHFFDRGYHEITPPSLVQTQVEGGAT--------LFKLNYFGEEAFL 306

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E      +++ L+    
Sbjct: 307 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPLLTFDDLLNRLE 365

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +          NP  +P                    ++  D       
Sbjct: 366 DLVCDVVDRILKSPAGSIVYELNPNFQPPKRPF-------------KRMNYSDAIIWLKE 412

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +   ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 413 HDIKKEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 466

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
             T+  ++   N+             E     E     K++  +        D+      
Sbjct: 467 CLTESVDVLMPNVGEIVGGSMRTSDAE-----EILAGYKREGIDPAPYYWYTDQR----K 517

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V   P 
Sbjct: 518 YGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 551


>gi|239994933|ref|ZP_04715457.1| lysyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 210

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 94/233 (40%), Gaps = 29/233 (12%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL-II 68
           W     Y  R   + R  +  ++RE+F     +E+D+  L      + H+ AF T+    
Sbjct: 4   WQPTTTYEAR---VARAELLRTIREFFYARNVLEVDTPLLSNGTVTDEHLDAFDTQFNFA 60

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
                  LYLQTSPE++ K+LL A    I+    A+R+  +G  H PEFTMLEWYR    
Sbjct: 61  SSGKPTTLYLQTSPEYAMKRLLCADSGSIYQVCKAFRHEGEGRWHNPEFTMLEWYRLGFD 120

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +  LM +   +++     A+                 + +T  +AF  Y NID       
Sbjct: 121 HFALMDEVDALLQETLNTASA----------------DKMTYQQAFQTYLNID------- 157

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDI--FSRILIEKIEPNLGINCCTILD 239
           P   D  +L    ++  I +      S       +    IEP +G      + 
Sbjct: 158 PLSADNDVLLKAMEEQNIDIHAPQNLSYDSKLQLLFSYAIEPKIGNEKPCFIY 210


>gi|258574089|ref|XP_002541226.1| asparaginyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237901492|gb|EEP75893.1| asparaginyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 734

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 47/353 (13%), Positives = 101/353 (28%), Gaps = 51/353 (14%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +    Y  R            +  R  +  + R  F +++ +E+   ++      G  T 
Sbjct: 410 DPQTLYDNRHLVLRGETASSVMKVRAAVLRAFRAVFEKSRMLEVTPPAMVQTQVEGGAT- 468

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   D+  +P YL  S +   +  L +    +FC   ++R  +     H  E+
Sbjct: 469 -------LFSFDYYGEPAYLTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEY 520

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++  L+     I+    ++      +                   A  + 
Sbjct: 521 THIEAELDFITFTDLLDHIEAIVCQVIDLVLADPQTA------------------AAIKA 562

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCC 235
            N           +          ++  I        T+ D  +     K+     IN  
Sbjct: 563 LNPSFTPPSRPFKRMKYAEAIEWLREHNIPNEDGTPHTFGDDIAEAAERKM--TDIINQP 620

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             L  +P    +      P D R T+  ++    +         +D  ++      +   
Sbjct: 621 IFLTHFPVEIKAFYMKKDPEDLRVTESVDVLMPGVGEIVGGSMRMDDWDEL----MDAYA 676

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++ +    Y    D            G  +G +R +  + G   + E    P 
Sbjct: 677 RQGMDPSPYYWYTD--QRKYGTSPHGGYGLGLERFLAWMCGRYTVRECCLYPR 727


>gi|195398059|ref|XP_002057642.1| GJ17991 [Drosophila virilis]
 gi|194141296|gb|EDW57715.1| GJ17991 [Drosophila virilis]
          Length = 558

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 50/354 (14%), Positives = 111/354 (31%), Gaps = 54/354 (15%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           + D     R  +++          R+++  + R +++E  + E+   +L      G  T 
Sbjct: 235 HPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRGHYIERGYNEVTPPTLVQTQVEGGST- 293

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L    +  +  YL  S +   +  L A    +F  A ++R  +     H  E+
Sbjct: 294 -------LFKMQYFGEEAYLTQSSQLYLETCLPA-LGDVFTIAQSYRAEQSRTRRHLAEY 345

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      +++ L+    +++    +   +  + +     NP  +P            
Sbjct: 346 THIEAECPFITFDDLLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPKKPFRRMPY-- 403

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCC 235
                                   ++  +       +   +        K+     IN  
Sbjct: 404 -----------------ADAIKWLKENNVPKEDGTFYEFGEDIPEAPERKMTDT--INEP 444

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            +L ++PA   S   +    D R T+  + L     E+      + D  E    +E    
Sbjct: 445 ILLIKFPAEIKSFYMSRCKDDQRLTESVDVLLPNVGEIVGGSMRIYDSAELMKGYE---- 500

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++ I  + Y    D    +       G  +G +R +  +    +I +V   P 
Sbjct: 501 -REGIDPKPYYWYTD--QRVYGTMPHGGYGLGLERFLCWLLNRYHIRDVCLYPR 551


>gi|156547524|ref|XP_001606841.1| PREDICTED: similar to BcDNA.GH06451 [Nasonia vitripennis]
          Length = 555

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 50/354 (14%), Positives = 109/354 (30%), Gaps = 50/354 (14%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
           Q+ ++    R  +  R   L+ R+++  + R+++ +  + E+   +L      G  T   
Sbjct: 236 QLDNRHIMIRGENTSR--ILIMRSVLTQAFRDHYKDRGYCEVTPPTLVQTQVEGGST--- 290

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   ++  +  YL  S +   +  + A    ++C A ++R  +     H  E+T 
Sbjct: 291 -----LFKLNYFGEEAYLTQSSQLYLETCIPA-MGDVYCIAQSYRAEQSRTRRHLAEYTH 344

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E      +++ L+    ++I    +   Q          NP  +               
Sbjct: 345 IEAECPFITFDDLLDRLEDLICDVVDRVLQSPMGPLVKELNPNFQVPKRPFRRM------ 398

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCTI 237
                        +        ++  I       +   +    +   K+     IN   +
Sbjct: 399 -------------NYSEAIEYLKENNITKDDGSFYEFGEDIPEMPERKMTDK--INEPIM 443

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           L R+PA   S        D R T+  ++   N+         +   +     E     K 
Sbjct: 444 LCRFPAEIKSFYMQRCEEDNRLTESVDVLLPNVGEIVGGSMRI--WDHDALLEGY---KS 498

Query: 297 KIYNETYPI---DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +        D+             G  +G +R +  +    +I EV   P 
Sbjct: 499 VGIDPAPYYWYTDQR----KYGTCPHGGYGLGLERFICWLLNRYHIREVCLYPR 548


>gi|66511652|ref|XP_623490.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like [Apis
           mellifera]
          Length = 556

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 110/356 (30%), Gaps = 54/356 (15%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
           Q+ ++    R  +  R   L  R+++  + R++F E    E+   +L      G  T   
Sbjct: 237 QLDNRHIMIRGENTSR--ILRLRSVLTQAFRDHFHERGCYEVTPPTLVQTQVEGGST--- 291

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   D+  +  +L  S +   +  L A    ++C A ++R  +     H  E+T 
Sbjct: 292 -----LFKLDYFGEEAFLTQSSQLYLETCLPA-MGDVYCIAQSYRAEQSRTRRHLAEYTH 345

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   A  ++E L+    +++    +        +     NP  +           +   
Sbjct: 346 VEAEYAFITFEDLLNRLEDMVCDVVDRVLNSNLGYLIKELNPDFKIPKRPFKRMDYK--- 402

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                           + YL+A            + +    +   K+     IN   +L 
Sbjct: 403 --------------DAIEYLRANNITKDDGTFYEFGEDIPEMPERKMTDT--INEPIMLC 446

Query: 240 RYPAPE-SALANIYPADPRFTKRFEL-------YACNIELCNACDELLDPIEQRHRFEKE 291
           ++PA   S        + R T+  ++                  DELL+           
Sbjct: 447 KFPAEIKSFYMQRCADNKRLTESVDVLLPNVGEIIGGSMRIWNYDELLEGYSN------- 499

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 I  + Y    D            G  +G +R +  +    +I EV   P 
Sbjct: 500 ----ANIDPKPYYWYTD--QRKYGTCPHGGFGLGLERFLCWLLNRYHIREVCLYPR 549


>gi|307178011|gb|EFN66872.1| Asparaginyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 1713

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 108/358 (30%), Gaps = 62/358 (17%)

Query: 11   NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
              D     R            L+ R+++  + R+++ +  + E+   +L      G  T 
Sbjct: 1390 LPDVQLDNRHIMIRGENTSKVLIMRSILVQAFRDHYRDRGYYEVTPPTLVQTQVEGGST- 1448

Query: 59   IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                   L   D+  +  +L  S +   +  + A    ++C A ++R  +     H  E+
Sbjct: 1449 -------LFKLDYFGENAFLTQSSQLYLETCMPA-MGDVYCVAQSYRAEQSRTRRHLAEY 1500

Query: 118  TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
            T +E       ++ L+    ++I    E   Q  F       NP  +             
Sbjct: 1501 THIEAECPFIMFDDLLDRLEDLICDVVERVLQSPFGHLVQELNPGFQIPKRPF------- 1553

Query: 178  ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
                    ++  D  +        ++ G      +   ++  R +         IN   +
Sbjct: 1554 ------KRMNYTDAIEYLRENNITKEDGSFYEFGEDIPEMPERKM------TDAINEPIL 1601

Query: 238  LDRYPAPE-SALANIYPADPRFTKRFEL-------YACNIELCNACDELLDPIEQRHRFE 289
            L R+P    S        + R T+  ++                  +ELL+         
Sbjct: 1602 LCRFPVEIKSFYMQRCAENERLTESVDVLLPNVGEIVGGSMRIWNYEELLEGY------- 1654

Query: 290  KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                +++ I    Y    D            G  +G +R +  +    +I EV   P 
Sbjct: 1655 ----KRENIDPTPYYWYTD--QRKYGSCPHGGYGLGLERFLCWLLNRYHIREVCLYPR 1706


>gi|149721122|ref|XP_001488269.1| PREDICTED: similar to Asparaginyl-tRNA synthetase [Equus caballus]
          Length = 559

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 49/332 (14%), Positives = 105/332 (31%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R ++    R++F +  + E+   +L      G  T        L   ++  +  +L
Sbjct: 256 ILKARCIVTRCFRDHFFDRGYCEVTPPTLVQTQVEGGAT--------LFKLNYFGEEAFL 307

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A    +FC A ++R  +     H  E++ +E      ++E+L+    
Sbjct: 308 TQSSQLYLETCIPA-LGDVFCIAQSYRAEQSRTRRHLAEYSHVEAECPFLTFEELLNRLE 366

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +    + NP  +P                              +L
Sbjct: 367 DLVCDVVDRVLKSPAASIVYDLNPNFKPPKRPFKRMNY-----------------SDAIL 409

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
           +L+             + +         +     IN   +L R+P    S      P D 
Sbjct: 410 WLKEHNIKKEDGTFYEFGEDIPEAPERLMTDT--INEPILLCRFPVEIKSFYMQRCPEDS 467

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     ++ I    Y    D       
Sbjct: 468 RLTESVDVLMPNVGEIVGGSMRIWDSEEMLAGYK-----REGIDPTPYYWYTD--QRKYG 520

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 521 TCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 552


>gi|195484386|ref|XP_002090672.1| GE12667 [Drosophila yakuba]
 gi|194176773|gb|EDW90384.1| GE12667 [Drosophila yakuba]
          Length = 558

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 47/353 (13%), Positives = 105/353 (29%), Gaps = 54/353 (15%)

Query: 12  RDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHI 59
            D     R  +++          R+++  + R ++    + E+   +L      G  T  
Sbjct: 236 PDVQLDNRHIMIRGENTSKVLKMRSVVTQAFRAHYEARGYNEVTPPTLVQTQVEGGST-- 293

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 L    +  +  YL  S +   +  L A    +F  + ++R  +     H  E++
Sbjct: 294 ------LFKLKYFGEEAYLTQSSQLYLETCLPA-LGDVFTISQSYRAEQSRTRRHLAEYS 346

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      +++ L+    +++    +   +                   +      +  
Sbjct: 347 HVEAECPFLTFDDLLDRLEDLVCDVVDRVLK-------------------SPWGYLVKEL 387

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCT 236
           N D         + +        ++  +       +   +        K+     IN   
Sbjct: 388 NPDFKPPQKPFRRMNYEDAIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDT--INEPI 445

Query: 237 ILDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQE 294
           +L R+PA   S        D R T+  + L     E+      + D  E           
Sbjct: 446 MLCRFPAEIKSFYMQRCKEDQRLTESVDVLLPNVGEIVGGSMRIYDSEELLK-----GYA 500

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++ I  + Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 501 REGIDPKPYYWYTD--QRVYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPR 551


>gi|194879712|ref|XP_001974286.1| GG21647 [Drosophila erecta]
 gi|190657473|gb|EDV54686.1| GG21647 [Drosophila erecta]
          Length = 558

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 106/353 (30%), Gaps = 54/353 (15%)

Query: 12  RDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHI 59
            D     R  +++          R+++  + R ++    + E+   +L      G  T  
Sbjct: 236 PDVQLDNRHIMIRGENTSKVLKMRSVVTQAFRAHYEARGYNEVTPPTLVQTQVEGGST-- 293

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 L    +  +  YL  S +   +  L A    +F  + ++R  +     H  E++
Sbjct: 294 ------LFKLKYFGEEAYLTQSSQLYLETCLPA-LGDVFTISQSYRAEQSRTRRHLAEYS 346

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E   A  +++ L+    +++    +   +                   +      +  
Sbjct: 347 HVEAECAFLTFDDLLDRLEDLVCDVVDRVLK-------------------SPWGYLVKEL 387

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCT 236
           N D         + +        ++  +       +   +        K+     IN   
Sbjct: 388 NPDFKPPQKPFRRMNYEDAIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDT--INEPI 445

Query: 237 ILDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQE 294
           +L R+PA   S        D R T+  + L     E+      + D  E           
Sbjct: 446 MLCRFPAEIKSFYMQRCKEDQRLTESVDVLLPNVGEIVGGSMRIYDSEELLK-----GYA 500

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++ I  + Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 501 REGIDPKPYYWYTD--QRIYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPR 551


>gi|134083170|emb|CAK48622.1| unnamed protein product [Aspergillus niger]
          Length = 509

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 64/372 (17%), Positives = 105/372 (28%), Gaps = 37/372 (9%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFV---ENQFIEIDSMSLQYS 52
           + QIP         H R R          R+     L   F       F+++    +  S
Sbjct: 143 LRQIP---------HLRIRTPFNSLLSRFRSECLYQLGNVFRHAPNGGFVQVHPPLITSS 193

Query: 53  ---PGNETHIRAFS-----TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
                 ET           T        R P YL  S +   +   AA    ++  +  +
Sbjct: 194 DCEGAGETFTVLPREAVGTTPADGDHFFRAPKYLTVSSQLHLEAY-AAELGNVWTMSPMF 252

Query: 105 RNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNII------RCAAEVANQKIFSFQNV 157
           R  +     H  EF MLE           + D +  +      R       Q+I + +  
Sbjct: 253 RAEKSDTPRHLSEFYMLEAEANFMDNLDTLTDLVEYLLRDLTRRLYDTPIGQEILTTKRP 312

Query: 158 NCNPFSEPEYIT-VAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
             +   E    T  A+   R+   ID              LL     +      +  TW 
Sbjct: 313 GESNSEELATATDPADLRQRWQDMIDGPKWRRMTYTEAIELLQDAVAKDSATFEYPPTWE 372

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
                   + I   L       +  YP P              T   E  AC   L    
Sbjct: 373 GGLQLEHEKYIVDVLNHGHPVFVTDYPKPIKPFYMAPSHASAATTHGETVACFDLLLPEV 432

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTG 335
            E+     + HR  + +Q  ++          D            G  +GFDR +  + G
Sbjct: 433 SEVAGGSLREHRLPEIIQNMRQHDLGHLQWYADLRR--WGTAPHGGFGLGFDRFLGYLAG 490

Query: 336 ANNINEVIWTPF 347
            +++ +++  P 
Sbjct: 491 VSSVRDIVAFPR 502


>gi|172058095|ref|YP_001814555.1| aspartyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|229559870|sp|B1YJF7|SYD_EXIS2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|171990616|gb|ACB61538.1| aspartyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 588

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 73/228 (32%), Gaps = 33/228 (14%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+   + +R +  E  F+E+++  L   +P     ++            
Sbjct: 133 RRPSLQETFRLRSKASNIMRNFLDEQDFLEVETPILTKSTPEGARDYLVPSRVHPGEFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 193 LPQ------SPQLFKQLLMVSGFERYFQIARCFRDEDLRADRQPEFTQVDIETSFMDVED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L     +++    +    K  +         +    +  AEA +R+   D   T    + 
Sbjct: 247 LYAMMESMMTRVMKETLGKDIT---------TPFPRMPYAEAMSRF-GSDKPDTRFGLEL 296

Query: 192 PDRHLLYLQA---------------QQAGIRVAHDDTWSDIFSRILIE 224
            D       A               +   ++ A D        ++   
Sbjct: 297 IDVAEAVTGAGFKVFDMALESGGEVKALNVKGAADQFSRKDIDKLQEF 344



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 9/126 (7%)

Query: 233 NCCTILDRYPAPESALANIYP--ADPRF--TKRFELYACNIELCNACDELLDPIEQRHRF 288
           +     + +P       ++     DP       ++L     EL      + +   Q   F
Sbjct: 441 DSRFYANHHPFTMPRREDLDKLETDPGSVLAVAYDLVLNGYELGGGSQRIYERDIQERMF 500

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               +       E        +       P  +GIA+G DRL+ML+ G  N+ + I  P 
Sbjct: 501 ----KLLGFTEEEANEQFGFLMEAFEYGTPPHAGIALGLDRLIMLLAGRTNLRDTIAFPK 556

Query: 348 SQSNQE 353
           + S  +
Sbjct: 557 TASASD 562


>gi|19111917|ref|NP_595125.1| cytoplasmic asparagine-tRNA ligase Nrs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|59798599|sp|O94567|SYNC_SCHPO RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|3850088|emb|CAA21915.1| cytoplasmic asparagine-tRNA ligase Nrs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 568

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 89/335 (26%), Gaps = 45/335 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R     ++R+ F   +  E+    +      G  T        L   ++  +  YL
Sbjct: 264 VLKVRARALRAMRDTFENLKMTEVTPPCMVQTQVEGGAT--------LFKFNYYGQDAYL 315

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    ++    ++R  +     H  EFT +E+     ++ + ++   
Sbjct: 316 TQSSQLYLEAALPA-LGSVYTIQESFRAEKSLTRRHLSEFTHVEFELPFVNFGEFLEIIE 374

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
             I    +       +                      +  N D         +      
Sbjct: 375 EFICQTIDRLLDDPIAT------------------PLIKQLNPDFVKPSRPFMRLSYEDA 416

Query: 198 YLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                +  I     +     D  +     K+     IN    L  +P    +       D
Sbjct: 417 IKYLNEHNILTPEGEQHKFGDDIAEAAERKMTDQ--INRPIFLTYFPLEIKSFYMKRVVD 474

Query: 256 -PRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
            P  T+  + L     E+      + D  E           K++  +        F    
Sbjct: 475 RPELTESVDCLMPNVGEIVGGSMRISDIQELL------AAYKREGIDPAPYY--WFTEQR 526

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                +  G  +G +R +  +     + E    P 
Sbjct: 527 KYGTTEHGGCGLGLERFLAWLCDRYTVRECCLFPR 561


>gi|19074329|ref|NP_585835.1| ASPARTYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74697556|sp|Q8SRQ8|SYDC_ENCCU RecName: Full=Probable aspartyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19068971|emb|CAD25439.1| ASPARTYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 473

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/333 (13%), Positives = 106/333 (31%), Gaps = 34/333 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R      + +    R Y  +N F+EI +  L   S     ++  FS      D+ ++  +
Sbjct: 166 RATFRVVDGVMFFFRTYLRQNGFMEIKTSKLIGSSSEGGANL--FSV-----DYFKRKAF 218

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDC 136
           +  SP+   +  +  G ++++   H +R  E     +  EF  L+      +    +   
Sbjct: 219 MAQSPQLYKQMAIVGGFKRVYEIGHVYRAEESNINRYLSEFVGLDMEMEICTDYNDVIRF 278

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           ++ +  +     +K +  +      F   E +                  D      R  
Sbjct: 279 IHSMLVSIFDNLKKEYGEELETIRAFHAFEDLKYR--------------RDPVVLTHREC 324

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
           + L   + G+ + ++D ++    + L   +    G++   ++  YP            + 
Sbjct: 325 VDLLLNE-GVEMGYEDDFNSESEKKLGSVVRRMHGVD-IFVIKDYPISTRPFYTYRDEEK 382

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
             T+ ++      E+ +    +    +     E+       +          +L      
Sbjct: 383 GITRSYDFILRGQEILSGAQRVSIYKDLVKYVEEHGISPSSLGG--------YLESFKYG 434

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            P   G  +G +RL+    G  +I      P  
Sbjct: 435 APPHGGCGIGLERLMKAYFGMGDIRCFSLFPRD 467


>gi|242398977|ref|YP_002994401.1| Asparaginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242265370|gb|ACS90052.1| Asparaginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 431

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/333 (14%), Positives = 107/333 (32%), Gaps = 43/333 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRAFSTELIIQDHIRKPLYL 78
            +  +  +  + RE+ +++ + E+    L      G  T        L    +  +  YL
Sbjct: 131 VMKVKGTLMQAAREWLLQDGWYEVFPPILVTGAVEGGAT--------LFKLKYFDREAYL 182

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  +    EK++    ++R  +     H  E+  LE   A      L++   
Sbjct: 183 SQSAQLYLEAAIFG-LEKVWSLTPSFRAEKSRTRRHLTEYWHLELEAAWMDLWDLLEVEE 241

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            ++    +                  E     + E    +  +            D  + 
Sbjct: 242 ELVSYMVQ---------------RTLELRKKEIEEFRKDFTTLKNSEPPFPRISYDEAID 286

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
            LQ++  G+++   +       RIL          +    +  YP    A       DP 
Sbjct: 287 ILQSK--GVKIEWGEDMGADEERIL------TQEFDRPFFVYGYPKHIKAFYMK--EDPE 336

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKKIYNETYPIDEDFLACL-TE 315
            +++    A ++       E++   ++   +EK + +  ++  +      E +L      
Sbjct: 337 DSRKAL--AADMLAPEGYGEVIGGSQREDDYEKLVQRILEEGMDPKNY--EWYLDLRKYG 392

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               SG  +G +RLV  V   N+I      P +
Sbjct: 393 SVPHSGFGLGLERLVAWVLKLNHIRWATLFPRT 425


>gi|169624345|ref|XP_001805578.1| hypothetical protein SNOG_15430 [Phaeosphaeria nodorum SN15]
 gi|111055975|gb|EAT77095.1| hypothetical protein SNOG_15430 [Phaeosphaeria nodorum SN15]
          Length = 489

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 108/348 (31%), Gaps = 34/348 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
            H          + +   + E+   N F  I +   +  +   +        E     + 
Sbjct: 157 RHAASGVIFKLHSGMCQLIVEFLCSNGFYWIHTPRIITATIPGD-------NEYFHLPYF 209

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC---LHQPEFTMLEWYRAHESY 129
            +  +L  S +   +  L+   +++F     +R   + C    H  EFT+L+     ++ 
Sbjct: 210 GRDAWLSQSSQHHKQMALSMDMQRVFEIGPVFRAEVKSCESSRHLTEFTVLDVGMVFQND 269

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              + + +  +        Q+   ++++     S           AR   I L  +   P
Sbjct: 270 YHEVMELIESMLVFVFRGLQQRKQYRHLIEAFMSLYP-------SARDFKIGLDESGKVP 322

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE--PNLGINCCTILDRYPAPESA 247
                    +  ++ G     D  ++D     L       P+ G      +D++PA    
Sbjct: 323 RITFLEAKRILREELGFETEDDKNFTDEEEAALGRHFRTSPSWGGTDVFTIDQFPASMRQ 382

Query: 248 LANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI-----YNE 301
             +   P     +  ++      E+C+    +         F +  +           + 
Sbjct: 383 FNSQANPDVRGLSNTWDTIVRGREICSGSQRINS-------FNELCEAMSAGVCGPPLDP 435

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                + +L      MP+  G  +G +RL+    G +++ E    P  
Sbjct: 436 KAEKWQSYLTAFRTGMPRHGGCGLGVNRLLQGFLGLDDVREATLFPRD 483


>gi|145609922|ref|XP_001409909.1| hypothetical protein MGG_12574 [Magnaporthe oryzae 70-15]
 gi|145017307|gb|EDK01670.1| hypothetical protein MGG_12574 [Magnaporthe oryzae 70-15]
          Length = 599

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/340 (17%), Positives = 121/340 (35%), Gaps = 37/340 (10%)

Query: 24  KRNMIQSSL-----------REYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
           KR+ ++S++           R Y  E  F E +S  +  +  +E     FS      D+ 
Sbjct: 261 KRSAVRSAVADVRETTKELFRSYLKERGFHEFESPCIIEAA-SEGGANVFSA-----DYF 314

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            K ++L  SP+F  +  +A G +++FC    +R        H  EFT L+     + +  
Sbjct: 315 DKKVFLAQSPQFYKQYEIAGGRQRVFCIGPVFRAENSNTPRHMTEFTGLDMEMVIKWHYH 374

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            ++D +  +        +K  + Q          E          +A  + G  +     
Sbjct: 375 EVRDMLEGVFLHIFRELKKQCAEQIETVRSVFPAED---------FALPEPGKEVRLTFA 425

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-N 250
             + LL  +  +    V+  +  S    + L E I    G +   +LD++P         
Sbjct: 426 EGQKLLREEGPEEFRNVSDFEDMSTPQEKALGEIIRRKFGTD-FYVLDKFPESARPFYTC 484

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             P +   T  ++ +    E+ +    +  P       E E + ++K  +      + ++
Sbjct: 485 EDPENRELTNAYDFFMRGQEIMSGGQRIHKPE------EIEARMRRKGLDPNSKGLKGYV 538

Query: 311 ACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  +P   G  +G DR+V      + +    + P +
Sbjct: 539 NTFRQAGVPPHGGGGIGLDRVVQFFLNLSTVQYAAFYPRT 578


>gi|7019629|gb|AAA23436.2| gene x protein (putative); putative [Escherichia coli]
          Length = 152

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 4/148 (2%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F T  +  
Sbjct: 7   WQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGP 63

Query: 70  DH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            H     L+L TSP++  K+LL AG   +F    ++RN E G  H PEFTMLEWYR H  
Sbjct: 64  GHSQGMNLWLMTSPQYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD 123

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQN 156
             +LM +  ++++   +   ++  S+Q 
Sbjct: 124 MYRLMNEVDDLLQQVLDCPAEESLSYQQ 151


>gi|294155503|ref|YP_003559887.1| asparagine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600455|gb|ADE19951.1| asparagine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 451

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 62/348 (17%), Positives = 116/348 (33%), Gaps = 34/348 (9%)

Query: 12  RDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
               +R    R  +L R+ +   + +YF+ N F  + S  +  +   E    AF+     
Sbjct: 121 PHVRHRTKTLRSAMLIRSTLAQEIHKYFMANDFYLMSSPIITSND-GEGAGEAFNVSDNS 179

Query: 69  QDHI---RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
            +      K   L  + +   +       +K++ FA  +R        H  EF M+E   
Sbjct: 180 PEPFFGQNKKATLGVTGQLHAESYAIG-FKKVYTFAPTFRAEHSNTKKHAAEFWMVEPEV 238

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A      ++K   ++++   +    K     +   +   +     +A       N+    
Sbjct: 239 AFYELNDVVKLADHMLKTVIKATLAKCKFEFDYLEDHIDKNLRNRLALFTGSKLNVIDYA 298

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                    +     Q  + G+         D+ +       E     N    +  +P  
Sbjct: 299 DAIKELAKVKSRFENQDIKFGL---------DLATEHERYLAEE--LFNGPVAVINFPKS 347

Query: 245 ESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNET- 302
             A       D +    F+L    I EL       +   +   R ++       I  E  
Sbjct: 348 FKAFYMHQNEDGKTVAAFDLLVPGIGELIGGSQREVRYDKLLERIKE-----IGIDQEEI 402

Query: 303 -YPID-EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + +D   F    +    SSG  +GF+RLVM +TG +NI +VI  P +
Sbjct: 403 QWYLDLRKFGD--SG---SSGFGLGFERLVMYITGLDNIRDVIPYPRT 445


>gi|194756652|ref|XP_001960590.1| GF11428 [Drosophila ananassae]
 gi|190621888|gb|EDV37412.1| GF11428 [Drosophila ananassae]
          Length = 460

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 118/369 (31%), Gaps = 56/369 (15%)

Query: 4   IPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGN 55
           +P +       H R R       +  R+  Q ++ +Y  E  F++I++  L  +      
Sbjct: 116 LPPEYV-REHLHLRSRVDYIAAQMRIRHKAQKAIHDYMDELDFVQINTPLLTTNDCEGAG 174

Query: 56  ETH-------------IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
           E                +        Q +  + ++L  S +    + +  G    + F+ 
Sbjct: 175 EVFRVQPDSEALLKTMAKPNV--PAEQSYFDEKVFLSVSGQLHL-EAMTYGLGNTYTFSP 231

Query: 103 AWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
           A+R       LH  EF M E   +H +  ++L      +++       +      N    
Sbjct: 232 AFRAENSKSPLHLAEFYMFEAELSHLKEVDKLAAFIEQMLKSITTRLLESSSDDLNFCQR 291

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
             +    +       + A+ D              +L   A      ++  D +S     
Sbjct: 292 NANASSDLAWLNVPWKIASYD----------EALQILQDNADSLKTPISIQDGFSKDQEL 341

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNI-ELCNACDEL 278
            L+              +  +PA +         ++P      +L    + ELC      
Sbjct: 342 FLVSHFAA------PVFVVDWPAQQKPFYMKVSRSNPNRVHALDLLMPAVGELCGGSLRE 395

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANN 338
            DP         ++ +     N ++ +D   L        + G  MGF+R + LVTG  N
Sbjct: 396 SDPSVLSS--HPQLPK-----NLSWYVD---LRK-YGGVPTGGFGMGFERYLQLVTGVKN 444

Query: 339 INEVIWTPF 347
           I +VI  P 
Sbjct: 445 IRDVIPFPR 453


>gi|19921528|ref|NP_609948.1| Asparaginyl-tRNA synthetase [Drosophila melanogaster]
 gi|5901824|gb|AAD55420.1|AF181634_1 BcDNA.GH06451 [Drosophila melanogaster]
 gi|7298549|gb|AAF53768.1| Asparaginyl-tRNA synthetase [Drosophila melanogaster]
 gi|220943736|gb|ACL84411.1| Aats-asn-PA [synthetic construct]
 gi|220953642|gb|ACL89364.1| Aats-asn-PA [synthetic construct]
          Length = 558

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 107/353 (30%), Gaps = 54/353 (15%)

Query: 12  RDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHI 59
            D     R  +++          R+++  + R ++    + E+   +L      G  T  
Sbjct: 236 PDVQLDNRHIMIRGENTSKVLKMRSVVTQAFRGHYEARGYNEVTPPTLVQTQVEGGST-- 293

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 L    +  +  YL  S +   +  L A    +F  + ++R  +     H  E+T
Sbjct: 294 ------LFKLKYFGEEAYLTQSSQLYLETCLPA-LGDVFTISQSYRAEQSRTRRHLAEYT 346

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      +++ L+    +++    +   +                   +      +  
Sbjct: 347 HVEAECPFLTFDDLLDRLEDLVCDVVDRVLK-------------------SPWGYLVKEL 387

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCT 236
           N D         + +        ++  +       +   +        K+     IN   
Sbjct: 388 NPDFKPPQKPFRRMNYEDAIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDT--INEPI 445

Query: 237 ILDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQE 294
           +L R+PA   S        D R T+  + L     E+      + D  E    ++     
Sbjct: 446 MLCRFPAEIKSFYMQRCKEDQRLTESVDVLLPNVGEIVGGSMRIYDSEELLKGYK----- 500

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++ I  + Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 501 REGIDPQPYYWYTD--QRVYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPR 551


>gi|193216721|ref|YP_001999963.1| aspartyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193002044|gb|ACF07259.1| aspartyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 557

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/401 (13%), Positives = 108/401 (26%), Gaps = 80/401 (19%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRA-------FSTELIIQ--- 69
           L  R+ +   +R YF ++ FIE+++  L + +P     ++         F+     Q   
Sbjct: 132 LKLRHKLLLEIRNYFDKSNFIEVETPILCKSTPEGARDYLVPTRRKGKFFALPQSPQLYK 191

Query: 70  ---DHIRKPLYLQTS-------------PEFSC--KKLLAAGEEKIFCFAHAWRNGEQGC 111
                     Y Q +             PEF+    ++   G E++F           G 
Sbjct: 192 QLLMASGVERYFQIARVFRDEDLRKDRQPEFTQLDIEMSFGGMEELFSICEDMWKETLGN 251

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMN-IIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
           L     T  +      S      D  +             + +F   N    +      +
Sbjct: 252 LGYKIKTPFKHMDYFYSMAHYGNDKPDTRYEFLINDLGDSLGAFYPKNTFIKAIFFDRNI 311

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS--------------- 215
            +  +    I      +  +  + +    Q ++  I      +                 
Sbjct: 312 DDNLSLVKEIFQKNQGEQLEVINLNANKSQDKKLDIIKEMAKSQGIANPTIIISSGVKEE 371

Query: 216 ----------------------DIFSRIL-------IEKIEPNLGINCCTILDRYPAPES 246
                                 D  + +            E            ++     
Sbjct: 372 NALKALGAVRVTLNELYRLANEDELNFLWIVNWPMFEFDEESQTWAPAHHAFTQFDESTV 431

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                        K ++L     EL +    + DP  Q+  F            E     
Sbjct: 432 KYLETKEYSKVRAKSYDLVLNGFELGSGSIRIHDPEVQKKMFNVLNLS----PKEQQNKF 487

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             FL      +P  +G+A G +R++M++T + +I +VI  P
Sbjct: 488 GFFLKAFDYGLPPHNGVAFGIERVLMILTKSASIRDVIAFP 528


>gi|91091536|ref|XP_970641.1| PREDICTED: similar to Asparaginyl-tRNA synthetase CG10687-PA
           [Tribolium castaneum]
 gi|270000923|gb|EEZ97370.1| hypothetical protein TcasGA2_TC011193 [Tribolium castaneum]
          Length = 550

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/332 (16%), Positives = 111/332 (33%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
            L  R+++  + R+++++  + E+     +Q      +        L   D+  +  YL 
Sbjct: 247 ILRMRSVLLQAFRDHYLDRGYCEVTPPSIVQTQCEGGS-------TLFKMDYFGEEAYLT 299

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S +   +  L +    +FC A ++R  +     H  E+T +E      S+  L+    +
Sbjct: 300 QSSQLYLETCLPS-MGDVFCIAESFRAEQSRTRRHLAEYTHVEAECPFISFNDLLDRLED 358

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +I    +   +  +       NP  +                         D  D     
Sbjct: 359 LICDVVDRVLKSPYGDIVHELNPDFQVPTRPFLRMN-------------YSDAIDYLKKN 405

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPR 257
              ++ G      +   ++  R +         IN   +L R+PA   S   +  P D R
Sbjct: 406 NITKEDGSFYEFGEDIPEMPERKM------TDQINKPIMLCRFPANIKSFYMSKCPEDAR 459

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ--EKKKIYNETYPIDEDFLACLTE 315
            T+  ++   N+       E++    + H  E+ M   +++ I    Y    D       
Sbjct: 460 LTESVDVLLPNV------GEIVGGSMRIHNLEELMDGYKREGIDPTPYFWYTD--QRKYG 511

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R V  +    +I EV   P 
Sbjct: 512 TCPHGGYGLGLERFVCWLLNRYHIREVCLYPR 543


>gi|170059943|ref|XP_001865582.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167878527|gb|EDS41910.1| aspartyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 550

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 110/352 (31%), Gaps = 50/352 (14%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           N D     R  +++          R++I  + R ++ +  + E+   +L      G  T 
Sbjct: 227 NPDVQLDNRHIMIRGENTSKVLKMRDVIMQAFRAHYQDRGYTEVTPPTLVQTQVEGGST- 285

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   ++  +  +L  S +   +  + A    +FC A ++R  +     H  E+
Sbjct: 286 -------LFKLNYFGEEAFLTQSSQLYLETCIPA-LGDVFCIAQSYRAEQSRTRRHLAEY 337

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           + +E      S++ L+    +++    +   +          NP   P            
Sbjct: 338 SHVEAECPFISFDDLLDRLEDLVVDTVDRVLKSPHGHLVQELNPGFVPPKRPFRRMNY-- 395

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
                             +++L+             + +        K+     IN   +
Sbjct: 396 ---------------SEAIVWLKENNVTKEDGTFYEFGEDIPEGPERKMTDT--INEPIM 438

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           L R+PA   S      P D R T+  + L     E+        D  E    ++     +
Sbjct: 439 LCRFPAEIKSFYMAKCPEDLRLTESVDVLLPNVGEIVGGSMRSWDNEELLAGYK-----R 493

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + I  + Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 494 EGIDPKPYYWYTD--QRVYGTQPHGGYGLGLERFMCWLLNRYHIREVCLYPR 543


>gi|195580101|ref|XP_002079894.1| GD21774 [Drosophila simulans]
 gi|194191903|gb|EDX05479.1| GD21774 [Drosophila simulans]
          Length = 558

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/353 (13%), Positives = 106/353 (30%), Gaps = 54/353 (15%)

Query: 12  RDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHI 59
            D     R  +++          R+++  + R ++    + E+   +L      G  T  
Sbjct: 236 PDVQLDNRHIMIRGENTSKVLKMRSVVTQAFRAHYEARGYNEVTPPTLVQTQVEGGST-- 293

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 L    +  +  YL  S +   +  L A    +F  + ++R  +     H  E++
Sbjct: 294 ------LFKLKYFGEEAYLTQSSQLYLETCLPA-LGDVFTISQSYRAEQSRTRRHLAEYS 346

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      ++++L+    +++    +   +                   +      +  
Sbjct: 347 HVEAECPFLTFDELLDRLEDLVCDVVDRVLK-------------------SPWGYLVKEL 387

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCT 236
           N D         + +        ++  +       +   +        K+     IN   
Sbjct: 388 NPDFKPPQKPFRRMNYEDAIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDT--INEPI 445

Query: 237 ILDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQE 294
           +L R+PA   S        D R T+  + L     E+      + D  E           
Sbjct: 446 MLCRFPAEIKSFYMQRCKEDQRLTESVDVLLPNVGEIVGGSMRIYDSEELLK-----GYA 500

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++ I  + Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 501 REGIDPQPYYWYTD--QRVYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPR 551


>gi|50284857|ref|XP_444856.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524158|emb|CAG57749.1| unnamed protein product [Candida glabrata]
          Length = 548

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 107/355 (30%), Gaps = 55/355 (15%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            +  R  +  S+R  + E    E+    +      G  T 
Sbjct: 224 DPSLLLDQRHLALRGETLSAVMKVRAALMKSIRRVYTEESLTEVTPPCMVQTQVEGGST- 282

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   D+  +  YL  S +   +  L +    ++C   ++R  +     H  E+
Sbjct: 283 -------LFKLDYYGEQAYLTQSSQLYLETCLPS-LGDVYCVQESFRAEKSHTRRHLSEY 334

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E   A  ++E+L+     ++    +   +   +                      + 
Sbjct: 335 THIEAELAFLTFEELLDHIERVLCKTVQYILEDPIAG------------------PLVKQ 376

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD--TWSDIFSRILIEKIEPNLGINCC 235
            N D         + +        ++  I+    +   + D  +     K+   +G+   
Sbjct: 377 LNPDFQAPKMPFMRLEYKDAIEWLKEHDIKNEDGEEFKFGDDIAEAAERKMTDTIGV--P 434

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            +L ++PA   S        D R T+  + L     E+      +    E    F+    
Sbjct: 435 ILLTKFPAEIKSFYMPRCKDDNRVTESVDVLMPTVGEITGGSMRINTEEELLAGFK---- 490

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++ I  + Y     F+           G  +G +R++  +     + +    P 
Sbjct: 491 -RENIDPKAYY---WFIDQRKYGTCPHGGYGLGTERILAWLCNRFTVRDCSLYPR 541


>gi|224122518|ref|XP_002330501.1| predicted protein [Populus trichocarpa]
 gi|222872435|gb|EEF09566.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 87/281 (30%), Gaps = 17/281 (6%)

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAH 126
            QD   +  +L  S +   +    A    ++ F   +R        H  EF M+E   A 
Sbjct: 297 AQDFFARQAFLTVSGQLQVETYACAV-TSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAF 355

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              +  M      ++   +    K F    +    + +               +   T  
Sbjct: 356 ADLQDDMNCAEAYVKYMCQWLLDKCFDDMELMAKLYDK--------GCIDRLRMVSSTPF 407

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           +     +   L  +A + G     +  W    +      +   +      I+  YP    
Sbjct: 408 ERISYTEAVRLLEEAVRGGKEFEKNVEWGIDLASEHERYLTEEIFKKPV-IVYNYPKGIK 466

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           A       D +     ++    +       EL+   ++  R+E   Q   ++     P D
Sbjct: 467 AFYMRLNDDSKTVAAMDILVPKV------GELIGGSQREERYEVIQQRIAEMGLPLEPYD 520

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                      +  G  +GF+R+++  TG +NI +VI  P 
Sbjct: 521 WYLDLRRYGTVKHCGFGLGFERMILFATGIDNIRDVIPFPR 561


>gi|302807108|ref|XP_002985285.1| hypothetical protein SELMODRAFT_121831 [Selaginella moellendorffii]
 gi|300147113|gb|EFJ13779.1| hypothetical protein SELMODRAFT_121831 [Selaginella moellendorffii]
          Length = 563

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 88/280 (31%), Gaps = 16/280 (5%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   +  +L  S +   +    +    ++ F   +R        H  EF M+E   A   
Sbjct: 291 DFFGRQAFLTVSGQLQVETYACS-LSNVYTFGPTFRAENSHTTRHLAEFWMIEPELAFAD 349

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            +  M    + ++   +            +   F    +   A    +         +  
Sbjct: 350 LQDDMNCAEDYVKFLCQ-----WLLDNCYDDMEFMTKMWDNTALDRLKLVASTPFARITY 404

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
               ++ L     Q       +  +W    +      +          I+  YP    A 
Sbjct: 405 TQAIEKKLTLADTQVKDRTFENPVSWGVDLASEHERYLAEE-LFQKPVIVYNYPKDIKAF 463

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                 D +     ++    +       EL+   ++  R+E  +Q  +++   T P  E 
Sbjct: 464 YMRMNDDGKTVAAMDILVPKV------GELVGGSQREERYEVLVQRLQELNLPTEPY-EW 516

Query: 309 FLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +L        + SG  +GF+R+V+  TG  NI +VI  P 
Sbjct: 517 YLDLRRYGTVKHSGFGLGFERMVLFATGLENIRDVIPFPR 556


>gi|213027828|ref|ZP_03342275.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 179

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 4/160 (2%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           YR H    +LM +  ++++   +    +  S+Q       
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDCQPAESLSYQQAFLRHL 157


>gi|261880137|ref|ZP_06006564.1| lysine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333107|gb|EFA43893.1| lysine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 267

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 24/130 (18%)

Query: 1   MHQIPS---------QPWWNRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQ 40
           +  +P            + + +   R+R              LKR  +  ++R++F E  
Sbjct: 141 LKPLPIVKYKDGVAYDKFDDPELRARQRYVDLVVNDGVKETFLKRATVLRTMRKFFDEAG 200

Query: 41  FIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
           + E+++  LQ   G  +  R F T     + +   +Y++ + E   K+L+  G E ++  
Sbjct: 201 YTEVETPILQSIAGGAS-ARPFITHF---NALNIDMYMRIATELYLKRLIVGGFEGVYEI 256

Query: 101 AHAWRNGEQG 110
              +RN    
Sbjct: 257 GKNFRNEGMD 266


>gi|258568136|ref|XP_002584812.1| aspartyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237906258|gb|EEP80659.1| aspartyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 561

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 97/326 (29%), Gaps = 24/326 (7%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           + +     E+ +++    I +  L  +   E     F        + ++  YL  SP+  
Sbjct: 251 SGVAQLFAEFMLKSGARWIFTSKLSGTA-TEGGSDVFE-----LGYFKRKAYLSQSPQLG 304

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
            +  +A     +F     +R  E     H  EF  L++ R  + +   +      +    
Sbjct: 305 KQMCIAGDMMNVFEIGPVFRAEESNTHRHLTEFIGLDFERTFQRHYHEVLSFAEELLVFI 364

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
               +  +  Q                    +   +     +    +    +   +  + 
Sbjct: 365 LSELKTRYKDQIDIIQKSYPKAGDFRLPKDGKALRLKYMEGIALLKEAGVDVSEQERFEN 424

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFE 263
            +  A +     I                   +LD++P+          P DP F+  ++
Sbjct: 425 DLTTAMEKQLGRIIREKYD---------TDFYVLDKFPSAVRPFYTKSCPDDPTFSNSYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGI 322
            +    E+ +    + +  E       E   + +  +      ED+L    +     +G 
Sbjct: 476 FFMRGEEIMSGAQRINEVEEL------EAAMRARGVDPKSEGFEDYLGAFRQACSPHAGG 529

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFS 348
            +G +R+VM   G  NI      P  
Sbjct: 530 GLGLNRIVMFFLGLPNIRLATLFPRD 555


>gi|195345035|ref|XP_002039081.1| GM17026 [Drosophila sechellia]
 gi|194134211|gb|EDW55727.1| GM17026 [Drosophila sechellia]
          Length = 558

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/353 (13%), Positives = 107/353 (30%), Gaps = 54/353 (15%)

Query: 12  RDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHI 59
            D     R  +++          R+++  + R ++    + E+   +L      G  T  
Sbjct: 236 PDVQLDNRHIMIRGENTSKVLKMRSVVTQAFRAHYEARGYNEVTPPTLVQTQVEGGST-- 293

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 L    +  +  YL  S +   +  L A    +F  + ++R  +     H  E++
Sbjct: 294 ------LFKLKYFGEEAYLTQSSQLYLETCLPA-LGDVFTISQSYRAEQSRTRRHLAEYS 346

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E   +  ++++L+    +++    +   +                   +      +  
Sbjct: 347 HVEAECSFLTFDELLDRLEDLVCDVVDRVLK-------------------SPWGYLVKEL 387

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCT 236
           N D         + +        ++  +       +   +        K+     IN   
Sbjct: 388 NPDFKPPQKPFRRMNYEDAIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDT--INEPI 445

Query: 237 ILDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQE 294
           +L R+PA   S        D R T+  + L     E+      + D  E           
Sbjct: 446 MLCRFPAEIKSFYMQRCKEDQRLTESVDVLLPNVGEIVGGSMRIYDSEELLK-----GYA 500

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++ I  + Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 501 REGIDPQPYYWYTD--QRVYGTMPHGGYGLGLERFLCWLLNRYHIREVCLYPR 551


>gi|170090366|ref|XP_001876405.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647898|gb|EDR12141.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 464

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 107/387 (27%), Gaps = 52/387 (13%)

Query: 2   HQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGN 55
           H + ++   + + H R R       +  R+ +   +  +F    F  + +  L  +    
Sbjct: 88  HALANEYLRD-NAHLRARTSHIAAMVRLRDSLARQMNAFFAAQGFCYVHTPILTGNDAEG 146

Query: 56  ETHIRAFSTELI----------------------IQDHIRKPLYLQTSPEFSCKKLLAAG 93
                 F    +                        +   +P YL  S +   + L  A 
Sbjct: 147 AGEA--FRISPVEGVHPASITPPSSPPPETSLQPPPEFFSRPAYLTVSHQLHLEALATA- 203

Query: 94  EEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC-----AAEVA 147
             +++  +  +R        H  EF MLE       + +  +    +           V 
Sbjct: 204 LSRVYTLSPCFRAERSLTSRHLAEFWMLEAEWILGPHTKDQRGLDEVCSFVEASIRNVVL 263

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
             +     +++       E    A   A         T  +  Q  + L      +A  +
Sbjct: 264 LGEQSMKDDIDVLWKDGNEKKRAAMEKAFSHVNSQAWTRMSYTQAVQELASFDHARASSK 323

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI--YPADPRFTK----- 260
                 W           +   + +     +  YPA             +P   +     
Sbjct: 324 FEFKPLWGKPLQSEHERWLAD-VLVGGPVFVTDYPASLKPFYMRANDTREPGQGEEDTVA 382

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
            F+L    +          D  +   R  +E      +  E Y   E+           +
Sbjct: 383 CFDLLVPGVGELVGGSVREDRADVLKRKMEE----AGLGREAYKWYEELRR--YGGAPHA 436

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPF 347
           G  MGF+RLV  V G +N+ E I  P 
Sbjct: 437 GFGMGFERLVGWVGGVDNVRECIPMPR 463


>gi|332022079|gb|EGI62404.1| Asparaginyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 516

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 116/350 (33%), Gaps = 42/350 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
           Q+ ++    R  +  R   L+ R+++  ++R+++ +  + E+   +L      G  T   
Sbjct: 197 QLDNRHIMIRGENTSR--ILIMRSILMQAVRDHYKDRGYHEVTPPTLVQTQVEGGST--- 251

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   D+  +P +L  S +   +  L A    ++C A ++R  +     H  E+T 
Sbjct: 252 -----LFKLDYFGEPAFLTQSSQLYLETCLPAM-GDVYCIAQSYRAEQSRTRRHLAEYTH 305

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E      +++ L+    ++I    E   +          NP  +               
Sbjct: 306 IEAECPFITFDDLLDRLEDLICDVVERVLKTSLGHLVKELNPNFQIPKKPF--------- 356

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                 ++  D  +        ++ G      +   ++  R +         IN   +L 
Sbjct: 357 ----KRMNYSDAIEYLRENNITKEDGSFYEFGEDIPEMPERKM------TDAINEPIMLC 406

Query: 240 RYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           R+PA   S        D R T+  + L     E+        D  E    ++     ++ 
Sbjct: 407 RFPAEIKSFYMQRCKDDERLTESVDVLLPNVGEIVGGSMRTWDHEELMEGYK-----REN 461

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           I    Y    D            G  +G +R +  +    +I EV   P 
Sbjct: 462 IDPTLYYWYTD--QRKYGSCPHGGYGLGLERFLCWLLNRYHIREVCLYPR 509


>gi|255731784|ref|XP_002550816.1| hypothetical protein CTRG_05114 [Candida tropicalis MYA-3404]
 gi|240131825|gb|EER31384.1| hypothetical protein CTRG_05114 [Candida tropicalis MYA-3404]
          Length = 400

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 89/238 (37%), Gaps = 26/238 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            +   +  ++ ++ +  ++R++ ++ +F+E+ +  L    G   +   F T         
Sbjct: 185 VNPESKNPIIIKSKVIQAIRKFLMDREFLEVSTPIL-SGKGTGANATPFITTFK-----S 238

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
           + ++L+ +PE   KK +  G +K+F     +RN      H PEF+  E+Y+A+ S E+LM
Sbjct: 239 QQVHLRVAPELWLKKFVIGGFDKVFEIGSNFRNEGIDMTHNPEFSTCEFYQAYTSLEELM 298

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
                + +               V C+ F + +++   E   +   + +        +  
Sbjct: 299 DLTEELFKYVFAKVGG-------VECDSFPKYDFLPTLE---KRTGLAIP-------ELT 341

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE---PNLGINCCTILDRYPAPESAL 248
              L    ++  + V        + + +    +E        N    +   P   S  
Sbjct: 342 LEALLGYYKKLELEVPPQPNPVKLLNNLSEIYLESLCEEHPKNTPVFIYNQPEVMSPF 399


>gi|89257628|gb|ABD65116.1| asparaginyl-tRNA synthetase, putative [Brassica oleracea]
          Length = 705

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 95/361 (26%), Gaps = 60/361 (16%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFSTE 65
            H R R          RN +  +  ++F E+ F+ + S  +  S      E         
Sbjct: 206 AHLRPRTNSFGAVARVRNTLAYATHKFFQESGFVWVASPIITASDCEGAGEQFCVTILIP 265

Query: 66  LI---------------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
                                   QD   KP +L  S + + +    A    I+ F   +
Sbjct: 266 SSHETTDSPIDAIPKTKGGLVDWSQDFFGKPAFLTVSGQLNGETYATA-LSDIYTFGPTF 324

Query: 105 RNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R        H  EF  L                   +             +   NC    
Sbjct: 325 RAENSNTSRHLAEFWNLLL--------------PTWMMTWPVPPPTSPVKYVLDNCKEDM 370

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
           E     + +      +  +          D   L L+A +          W         
Sbjct: 371 EFFDTWIEKGITHRLSDVVEKEFLQLSYTDAIELLLKANK---EFEFPVKWGLDLQSEHE 427

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
             I          I+  YP    A       D +     ++    +       EL+   +
Sbjct: 428 RYITEEAFEGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDMLVPRV------GELIGGSQ 481

Query: 284 QRHRFEKEMQEKK--KIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +  R E         K+  E+Y     +L          +G  +GF+RLV   TG +NI 
Sbjct: 482 REERLEVLEARLDGLKLDKESY---WWYLDLRRYGSVPHAGFGLGFERLVQFATGIDNIR 538

Query: 341 E 341
           +
Sbjct: 539 D 539



 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 46/154 (29%), Gaps = 12/154 (7%)

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                 +A         W           I          I+  YP    A       D 
Sbjct: 554 AIELLLKANKEFEFPVKWGLDLQSEHERYITEEAFEGRPVIIRDYPKEIKAFYMRENDDG 613

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK--KIYNETYPIDEDFLA-CL 313
           +     ++    +       EL+   ++  R E         K+  E+Y     +L    
Sbjct: 614 KTVAAMDMLVPRV------GELIGGSQREERLEVLEARLDGLKLDKESY---WWYLDLRR 664

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 +G  +GF+RLV   TG +NI +VI  P 
Sbjct: 665 YGSVPHAGFGLGFERLVQFATGIDNIRDVIPFPR 698


>gi|302773353|ref|XP_002970094.1| hypothetical protein SELMODRAFT_92995 [Selaginella moellendorffii]
 gi|300162605|gb|EFJ29218.1| hypothetical protein SELMODRAFT_92995 [Selaginella moellendorffii]
          Length = 563

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 88/280 (31%), Gaps = 16/280 (5%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   +  +L  S +   +    +    ++ F   +R        H  EF M+E   A   
Sbjct: 291 DFFGRQAFLTVSGQLQVETYACS-LSNVYTFGPTFRAENSHTTRHLAEFWMIEPELAFAD 349

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            +  M    + ++   +            +   F    +   A    +         +  
Sbjct: 350 LQDDMNCAEDYVKFLCQ-----WLLDNCYDDMEFMTKMWDNTALDRLKLVASTPFARITY 404

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
               ++ L     Q       +  +W    +      +          I+  YP    A 
Sbjct: 405 TQAIEKKLTLADTQVKDRTFENPVSWGVDLASEHERYLAEE-LFQKPVIVYNYPKDIKAF 463

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                 D +     ++    +       EL+   ++  R+E  +Q  +++   T P  E 
Sbjct: 464 YMRMNDDGKTVAAMDILVPKV------GELVGGSQREERYEVLVQRLQELNLPTEPY-EW 516

Query: 309 FLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +L        + SG  +GF+R+V+  TG  NI +VI  P 
Sbjct: 517 YLDLRRYGTVKHSGFGLGFERMVLFATGLENIRDVIPFPR 556


>gi|242776859|ref|XP_002478916.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218722535|gb|EED21953.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 578

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 110/351 (31%), Gaps = 47/351 (13%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +    Y  R            +  R     + R  F   + +E+   S+  +     + +
Sbjct: 254 DPQTLYDNRHLVLRGETSSSVMKVRAATLRAFRRTFEATRMLEVTPPSMVQTQVEGGSTL 313

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
            +F       D+  +P YL  S +   +  L A    +FC   ++R  +     H  E+T
Sbjct: 314 FSF-------DYYGEPAYLTQSSQLYLETCL-ASLGDVFCICPSFRAEKSLTRRHLSEYT 365

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      +++ L++    +I     V  + +   Q         P++   +  F R  
Sbjct: 366 HIEAELDFITFDDLLEHLEEVIST---VIGELLADEQTAKLIKDLNPDFKVPSRPFKRMR 422

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D    L   + P+                    + D  +     K+     IN    L
Sbjct: 423 YSDAIDWLREHNIPNEE-------------GQPHQFGDDIAEAAERKM--TDIINQPIFL 467

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKK 296
             +PA   +      P DPR T+  ++    + E+      + D  E          +++
Sbjct: 468 THFPAEIKAFYMKKDPQDPRVTESVDVLMPGVGEIVGGSCRIDDWDELIA-----AYKRE 522

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++    Y    D            G  +G +R +  + G   + E    P 
Sbjct: 523 EMDPSPYYWYTD--QRKYGTSPHGGYGLGLERFLAWICGRYTVRECCLYPR 571


>gi|169846462|ref|XP_001829946.1| asparaginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|116508973|gb|EAU91868.1| asparaginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 582

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/342 (14%), Positives = 98/342 (28%), Gaps = 28/342 (8%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R  + ++ R+    +  +E+    L      G  T        L   D+  +P +L
Sbjct: 247 ILRLRAYMMTAFRDALHSHDLMEVTPPCLVQTQVEGGAT--------LFKLDYYGQPAFL 298

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L +    +FC   ++R        H  E+T LE   A  +++ LM    
Sbjct: 299 TQSSQLYLETCLPS-LGDVFCIQESFRAENSHTRRHLSEYTHLEAELAFITFDDLMNHIE 357

Query: 138 NIIRCAAE---------VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           ++I    +            +++         PF    Y+   E   +            
Sbjct: 358 DVICKTVDSLLANPVSAALVKQLNPDFKPPERPFMRMSYVDAIEWLNKRGIQHPAEDEQG 417

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                           G  +  D    D  +     ++   +G      L  +PA   A 
Sbjct: 418 NVIKVDKEGKPTTDGTGEVLMVDHKIGDDIAEAAERRMTDEIG--KPIFLHGFPAELKAF 475

Query: 249 ANIY-PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE--KKKIYNETYPI 305
                P  P              L     E++    +    E+ +    ++ I  + Y  
Sbjct: 476 YMKKAPVKPGQEGGPVFTESCDLLMPNVGEIVGGSMRIADAEELLAAYKREGIDPDPYYW 535

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             D         +  G  +G +R +  +     + E    P 
Sbjct: 536 FTD--QRKYGTCEHGGYGLGVERFLAWLANRYTVRECSLYPR 575


>gi|15241897|ref|NP_200479.1| SYNC1; ATP binding / aminoacyl-tRNA ligase/ asparagine-tRNA ligase/
           aspartate-tRNA ligase/ nucleic acid binding / nucleotide
           binding [Arabidopsis thaliana]
 gi|20140329|sp|Q9SW96|SYNC1_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 1; AltName:
           Full=Asparagine--tRNA ligase 1; Short=AsnRS 1; AltName:
           Full=Protein EMBRYO DEFECTIVE 2755
 gi|5670315|gb|AAD46681.1|AF170909_1 SYNC1 protein [Arabidopsis thaliana]
 gi|10176772|dbj|BAB09886.1| SYNC1 protein [Arabidopsis thaliana]
 gi|133778862|gb|ABO38771.1| At5g56680 [Arabidopsis thaliana]
 gi|332009412|gb|AED96795.1| asparaginyl-tRNA synthetase, cytoplasmic 1 [Arabidopsis thaliana]
          Length = 572

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 87/280 (31%), Gaps = 19/280 (6%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   +  +L  S +   +    A    ++ F   +R        H  EF M+E   A   
Sbjct: 303 DFFGRQAFLTVSGQLQVETYACA-LSNVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFAD 361

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            E  M      ++       +K ++   +    F                 +   T    
Sbjct: 362 LEDDMNCAEAYVKYMCNWLLEKCYADMELMAKNFDS--------GCIDRLKLVASTPFGR 413

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                   L  +A   G    ++  W    +      +   +      I+  YP    A 
Sbjct: 414 ITYTKAIELLEEAVAKGKEFDNNVEWGIDLASEHERYLTE-VLFQKPLIVYNYPKGIKAF 472

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                 D +     ++    +       EL+   ++  R++   +  +++     P  E 
Sbjct: 473 YMRLNDDEKTVAAMDVLVPKV------GELIGGSQREERYDVIKKRIEEMGLPIEPY-EW 525

Query: 309 FLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +L        +  G  +GF+R+++  TG +NI +VI  P 
Sbjct: 526 YLDLRRYGTVKHCGFGLGFERMILFATGLDNIRDVIPFPR 565



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 10/84 (11%)

Query: 3   QIPSQPWWN---RDF-HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +P         RD  H R R          RN +  +   +F E+ F+ I +  +  S 
Sbjct: 143 PLPKTKLTLETLRDVLHLRSRTNSISAVARIRNALAFATHSFFQEHSFLYIHTPIITTSD 202

Query: 53  PGNETHIRAFSTELIIQDHIRKPL 76
                 +   +T +   + + + L
Sbjct: 203 CEGAGEMFQATTLINYTERLEQDL 226


>gi|195438242|ref|XP_002067046.1| GK24233 [Drosophila willistoni]
 gi|194163131|gb|EDW78032.1| GK24233 [Drosophila willistoni]
          Length = 558

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/353 (14%), Positives = 110/353 (31%), Gaps = 54/353 (15%)

Query: 12  RDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHI 59
            D    +R  +++          R+++  + R +++   + E+   +L      G  T  
Sbjct: 236 PDVQLDQRHIMIRGENTSNVLKMRSVVLQAFRAHYLGRDYNEVTPPTLVQTQVEGGST-- 293

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 L    +  +  YL  S +   +  L A    +FC A ++R  +     H  E+T
Sbjct: 294 ------LFKLQYFGEEAYLTQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYT 346

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      S++ L+    +++    +   +  +                          
Sbjct: 347 HVEAECPFISFDDLLDRLEDLVCDVVDRVLKSPWGHLVYE-------------------L 387

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCT 236
           N D         + +        ++  +       +   +        K+     IN   
Sbjct: 388 NPDFKVPKKPFRRMNYSDAIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDT--INEPI 445

Query: 237 ILDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQE 294
           +L R+P    S   +  P D R T+  + L     E+      + +  E    +E     
Sbjct: 446 MLCRFPVEIKSFYMSRCPEDQRLTESVDVLLPNVGEIVGGSMRIWNSEELLKGYE----- 500

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++ I  + Y    D    +       G  +G +R +  +    +I +V   P 
Sbjct: 501 REGIDPKPYYWYTD--QRVYGSMPHGGYGLGLERFICWLLNRYHIRDVCLYPR 551


>gi|212224110|ref|YP_002307346.1| asparaginyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212009067|gb|ACJ16449.1| asparaginyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 430

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/352 (15%), Positives = 109/352 (30%), Gaps = 49/352 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP--GNETHIRA 61
           +  +         +    +  +  +  + RE+ +++ + E+    L      G  T    
Sbjct: 115 LDVRHLHLHS--PKVASIMKVKATLMQAAREWLLQDGWYEVFPPILVTGAVEGGAT---- 168

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L    +  +  YL  S +   +  +    EK++    ++R  +     H  EF  L
Sbjct: 169 ----LFKLKYFDRYAYLSQSAQLYLEAAIFG-LEKVWSLTPSFRAEKSRTRRHLTEFWHL 223

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A      +MK    ++    +   +                   +  E F +    
Sbjct: 224 ELEAAWMDLWDIMKVEEELVSYMVQRTLEL----------------RRSDIETFRKDLTT 267

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
              T    P +          Q  G+++   +       RIL ++ E          +  
Sbjct: 268 LKNTVPPFP-RISYDEAIDILQSKGVQIEWGEDMGADEERILTQEFES------PFFVYG 320

Query: 241 YPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           YP    +      P DPR     +     +       E++    QR   +   +  ++I 
Sbjct: 321 YPKHIKAFYMKEDPEDPRKVLAAD-----MLAPEGYGEVIGGS-QRE--DDYDKLVQRIL 372

Query: 300 NETY-PID-EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +E   P D E +L          SG  +G +RLV  V   +++      P +
Sbjct: 373 DEGMDPKDYEWYLDLRKYGSVPHSGFGLGLERLVAWVLKLDHVRWATLFPRT 424


>gi|241594922|ref|XP_002404413.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215500406|gb|EEC09900.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 487

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 97/300 (32%), Gaps = 32/300 (10%)

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
           +  +E     F              YL  SP+   +  +A+  +K+F     +R  +   
Sbjct: 211 AAASEGGANVFEVSYFKGSA-----YLAQSPQLYKQMAIASDFDKVFTVGAVFRAEDSNT 265

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EF  L+   A   +   + D +  +        +  ++ +    N          
Sbjct: 266 HRHLCEFVGLDLEMAFNYHYHEVLDIIGQMFVDIFKGLRDRYADEIAAVNRQFPAPPFKF 325

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            E   R                +        + AG+ +  ++  S    ++L   ++   
Sbjct: 326 LEPSLR---------------LEFPEAVAMLRAAGVEMDDEEDLSTPNEKLLGRLVKAKY 370

Query: 231 GINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +   ILD+YP           P + + +  ++++    E+ +    + DP     R  
Sbjct: 371 DTD-FYILDKYPLKVRPFYTMPDPHNAKVSNSYDMFMRGEEILSGAQRIHDPTFLTER-- 427

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                K+   + +    + ++      +   +G  +G +R+ ML  G +NI +    P  
Sbjct: 428 ----AKEHGVDVSKI--KAYIDSFRYGVAPHAGGGIGLERVTMLYLGLDNIRKTSMFPRD 481


>gi|255546231|ref|XP_002514175.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223546631|gb|EEF48129.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 364

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 88/282 (31%), Gaps = 19/282 (6%)

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAH 126
             D   +  +L  S +   +  + A    ++ F   +R        H  EF M+E   A 
Sbjct: 93  GLDFFTRQAFLTVSGQLQVETYVCA-LSSVYTFGPTFRAENSHTSRHLAEFWMIEPEIAF 151

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              E  M      ++   +    K      +    + +               +   T  
Sbjct: 152 GDLEDDMNCAEAYVKYMCQWLLDKCLDDMELMAKLYDK--------GCIERLKMVASTPF 203

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
                 +   L ++A + G +  +   W    +      +   +      I+  YP    
Sbjct: 204 KRISYTEAVDLLIEAVKGGHKFENSVEWGIDLASEHERYLTE-ILFKKPVIVYNYPKGIK 262

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           A       D +     ++    +       EL+   ++  R E   Q   ++     P  
Sbjct: 263 AFYMRLNDDSKTVAAMDVLVPKV------GELIGGSQREERLEVIQQRIAEMGLPVEPY- 315

Query: 307 EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E +L        +  G  +GF+R+++  TG +NI +VI  P 
Sbjct: 316 EWYLDLRRYGTVKHCGFGLGFERMILFATGIDNIRDVIPFPR 357


>gi|213646512|ref|ZP_03376565.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 96

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 1/96 (1%)

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
            R  +RFE+Y   IEL N   EL D  EQ+ RFE++ +++        PID++ L  L  
Sbjct: 1   HRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQQPIDQNLLDALAA 60

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            +P  SG+A+G DRLVML  GA ++ +VI     ++
Sbjct: 61  GLPDCSGVALGVDRLVMLALGAESLADVIAFTVDRA 96


>gi|157113775|ref|XP_001652096.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108877614|gb|EAT41839.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 553

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 112/353 (31%), Gaps = 52/353 (14%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           + D     R  +++          R++I  + R ++ +  + E+   +L      G  T 
Sbjct: 230 HPDVQLDNRHIMIRGENTSKILKMRDVIMDAFRAHYHDRGYTEVTPPTLVQTQVEGGST- 288

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   ++  +  YL  S +   +  L A    ++C A ++R  +     H  E+
Sbjct: 289 -------LFKLNYFGEEAYLTQSSQLYLETCLPA-LGDVYCIAQSYRAEQSRTRRHLAEY 340

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           + +E      S++ L+    +++    +   +                   +      + 
Sbjct: 341 SHVEAECPFISFDDLLDRLEDLVVDVVDRVLK-------------------SPWGHIVKE 381

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
            N D         + +     +  ++  +       +          + +    IN   +
Sbjct: 382 LNPDFVPPKTPFRRMNYADAIVWLKENNVTKEDGTFYEFGEDIPEGPERKMTDTINEPIM 441

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           L R+PA   S      P D R T+  ++   N+             +     E    +++
Sbjct: 442 LCRFPAEIKSFYMAKCPEDRRLTESVDVLLPNVGEIVGGSMR--SWDHEELMEGY--KRE 497

Query: 297 KIYNET--YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            I  +   + ID+     +       G  +G +R +  +    +I EV   P 
Sbjct: 498 GIDPKPYYWYIDQR----VYGSQPHGGYGLGLERFMCWLLNRYHIREVCLYPR 546


>gi|170587862|ref|XP_001898693.1| Asparaginyl-tRNA synthetase, cytoplasmic [Brugia malayi]
 gi|158593963|gb|EDP32557.1| Asparaginyl-tRNA synthetase, cytoplasmic, putative [Brugia malayi]
          Length = 548

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 107/322 (33%), Gaps = 41/322 (12%)

Query: 32  LREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
           +RE+F    ++E+   +L      G  T        L   D+  +  +L  S +   +  
Sbjct: 255 MREHFYNAGYLEVAPPTLVQTQVEGGST--------LFNLDYFGEQSFLTQSSQLYLETC 306

Query: 90  LAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA- 147
           +      +FC A ++R  +     H  E+  +E      + + LM+    ++    +   
Sbjct: 307 IP-TLGDVFCIAQSYRAEKSRTRRHLAEYAHVEAECPFITLDDLMEKIEELVCDTVDRLL 365

Query: 148 -NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
            +++           F  PE       F R    D              + +LQ      
Sbjct: 366 ADEEAKKLLEHINPKFQPPER-----PFLRMEYKD-------------AIKWLQEHNVEN 407

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELY 265
              +  T+ +  +      +     IN   +L+R+P+   +        D   T+  +L 
Sbjct: 408 EFGNTFTYGEDIAEAAERFMTDT--INKPILLNRFPSEIKAFYMQRDAKDNTLTESVDLL 465

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
              +       E++    +  +F++  +  K +  +  P        L       G  +G
Sbjct: 466 MPGV------GEIVGGSMRIWKFDELSKAFKNVEIDPKPYYWYLDQRLYGTCPHGGYGLG 519

Query: 326 FDRLVMLVTGANNINEVIWTPF 347
            +R +  +T  N+I +V   P 
Sbjct: 520 LERFICWLTNTNHIRDVCLYPR 541


>gi|270619647|ref|ZP_06221826.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270317821|gb|EFA29180.1| lysine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 82

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            D  +Q  RF+ ++  K+   +E    DEDF+  L   +P ++G  +G DRL ML   A 
Sbjct: 9   NDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRLAMLYANAP 68

Query: 338 NINEVIWTPFSQ 349
           +I +VI  P  +
Sbjct: 69  SIRDVILFPAMR 80


>gi|123418390|ref|XP_001305315.1| asparaginyl-tRNA synthetase family protein [Trichomonas vaginalis
           G3]
 gi|121886827|gb|EAX92385.1| asparaginyl-tRNA synthetase family protein [Trichomonas vaginalis
           G3]
          Length = 624

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/354 (14%), Positives = 107/354 (30%), Gaps = 49/354 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRA 61
           + ++    R         +  R+ +   +RE F ++   E+    L  +   G  T    
Sbjct: 303 LDNRHLVLRSEFAS--TTMKVRDHLTRIIRENFYKHDCTEVVCPCLVQTQCEGGAT---- 356

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L   D   +  YL  S +    +   A    +FC   ++R  +     H  EFT +
Sbjct: 357 ----LFGLDFYGQKAYLTQSSQLYL-ETCCASMGDVFCIEPSFRAEKSKTPRHLCEFTHI 411

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP-----FSEPEYITVAEAFA 175
           E       +++LM    +++        +  F    +  NP         + IT  EA  
Sbjct: 412 EAEYPFIDFDELMSRIEDMVIAVVNGLLESEFKDFILKHNPDLKPLKKPFKRITHKEALE 471

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
                D+    ++ +                         D    +    +   +G  C 
Sbjct: 472 FCRTHDIPKDPEHLE-------------------DKWKDDDDIPELAERTLVDTIGELCF 512

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
               ++PA   +      P D   T+  +L    +       E++    +   +++ M  
Sbjct: 513 M--TKFPAAIKAFYMKRCPEDNSLTESCDLLVPGV------GEIVGGSMRLECYDELMNA 564

Query: 295 KKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 +  P    ++           G  +G +RLV  +    +I E    P 
Sbjct: 565 YLVNGLDPAPY-YWYVDQRRYGHFPHGGFGLGTERLVRWILKIGHIRETCLYPR 617


>gi|255731872|ref|XP_002550860.1| asparaginyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240131869|gb|EER31428.1| asparaginyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 552

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 105/348 (30%), Gaps = 39/348 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRA 61
           +  +    R         +  R    +++R ++ E    E+    +      G  T    
Sbjct: 233 LDQRHLTLRGETLS--AVMKVRAAYSAAIRRFYAEEGITEVTPPCMVQNQVEGGST---- 286

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTML 120
               L   D+  +  YL  S +   +  L A    +FC   ++R  +     H  E+T +
Sbjct: 287 ----LFKLDYYGEEAYLTQSSQLYLETCLPA-LGDVFCIQESFRAEKSHTRRHLSEYTHI 341

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E      ++  L+     ++    +   +   +   V     +     T  +       +
Sbjct: 342 EAELVFITFHDLLDHLERLLTKTIQYVLEDPVAGPIVKQLNPNFKAPTTPFKRMEYIEAL 401

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D       P+                       + D  +     K+     IN   +L R
Sbjct: 402 DWLNEHGIPN----------------EDGEKFKFGDDIAEAAERKMTDT--INEPILLIR 443

Query: 241 YPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           +PA   S        DPR T+  ++   N+         +D  ++         +++ + 
Sbjct: 444 FPAEIKSFYMQRCQDDPRVTESVDVLMPNVGEITGGSMRIDKYDELVA----AIKREGLN 499

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++Y    D +          G  +G +R++  +     + +    P 
Sbjct: 500 LDSYYWFTD-VRK-YGGSPHGGYGIGLERMLAYMLDRFTVRDCSLYPR 545


>gi|327308714|ref|XP_003239048.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326459304|gb|EGD84757.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 563

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 93/334 (27%), Gaps = 24/334 (7%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +  +   + +     EY +++    I +       G  T   +         + ++  Y
Sbjct: 245 SQAIMAISSGVAQLFSEYMLKSGSRWIFT---SKITGAATEGGSGV---FEISYFKRKAY 298

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  +A     +F     +R  +     H  EF  L++ R  + +   + D 
Sbjct: 299 LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNTHRHLTEFIGLDFERTFQKHYHEVLDF 358

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +        +  F  +                    +   +     L    +    +
Sbjct: 359 AENLLVFILSELKVRFKDEIAVVQKSYPKAGEFKLPKDGKALRLKYMEALGFLKEAGVDV 418

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
              +  +     A +     I                   ++D++P+          P D
Sbjct: 419 SEQERFENDFTTAMEKQLGRIIREKYD---------TDFYVVDKFPSAVRPFYTKSCPDD 469

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P F+  ++ +    E+ +    + D  E             +         ED++     
Sbjct: 470 PTFSNSYDFFMRGEEIMSGAQRINDAKELEE------AMVARGVEPNQEGFEDYINAFRQ 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +G  +G +R+V    G  NI      P  
Sbjct: 524 GCAPHAGGGLGLNRIVQFFLGLPNIRLATLFPRD 557


>gi|297793179|ref|XP_002864474.1| EMB2755 [Arabidopsis lyrata subsp. lyrata]
 gi|297310309|gb|EFH40733.1| EMB2755 [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 85/280 (30%), Gaps = 19/280 (6%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   +  +L  S +   +    A    ++ F   +R        H  EF M+E   A   
Sbjct: 303 DFFGRQAFLTVSGQLQVETYACA-LSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFAD 361

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            E  M      ++   +    K      +    F                 +   T    
Sbjct: 362 LEDDMNCAEAYVKYMCKWLLDKCRDDMELMAKNFDS--------GCIDRLELVESTPFGR 413

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
               +   L  +A   G    +   W    +      +   +      I+  YP    A 
Sbjct: 414 ITYTEAIELLEEAVAKGKEFDNKVEWGIDLASEHERYLTE-VLFQKPLIVYNYPKGIKAF 472

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                 D +     ++    +       EL+   ++  R++   +  +++     P  E 
Sbjct: 473 YMRLNDDEKTVAAMDVLVPKV------GELIGGSQREERYDVIKKRIEEMGLPIEPY-EW 525

Query: 309 FLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +L        +  G  +GF+R+++  TG +NI +VI  P 
Sbjct: 526 YLDLRRYGTVKHCGFGLGFERMILFATGIDNIRDVIPFPR 565



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 10/84 (11%)

Query: 3   QIPSQPWWN---RDF-HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +P         RD  H R R          RN +  +   +F E+ F+ I +  +  S 
Sbjct: 143 PLPKTKLTLEFLRDVLHLRSRTNSISAVARIRNALAFATHSFFQEHSFLYIHTPIITTSD 202

Query: 53  PGNETHIRAFSTELIIQDHIRKPL 76
                 +   +T +   + + + L
Sbjct: 203 CEGAGEMFQATTLINYTERLEQDL 226


>gi|157875933|ref|XP_001686332.1| asparaginyl-trna synthetase [Leishmania major strain Friedlin]
 gi|68129406|emb|CAJ07947.1| putative asparaginyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 890

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 103/339 (30%), Gaps = 39/339 (11%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+ +    RE+F    + E+   +L      G  T        L    +  +  YL
Sbjct: 572 VLKVRHELLRVFREHFWSRHYYEVTPPTLVQTQVEGGST--------LFEVLYYGETAYL 623

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +    + + A    ++C   ++R        H  EFT LE            +D +
Sbjct: 624 TQSSQLYL-ESVTASLGNVYCCVPSYRAERSKTKRHLSEFTHLEAEY----DVCSFEDLL 678

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           N +        + +           +  + I            D       P +P R L 
Sbjct: 679 NHLEDMFCTVIRTVIERVGDLVAMLNPSQLIDPNGNVR-----DPANYKFTPTRPFRRLR 733

Query: 198 YLQAQQ-------AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALA 249
           Y +A Q                 + D  +      +   LG      +  +PA   S   
Sbjct: 734 YAEAIQFCNENGILNTETGKPFEFGDDITDQPERAMVAKLGE--FVFMTHFPASMKSFYM 791

Query: 250 NIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
              P DP  T+  ++ A  I E+      +    E       +  +++ +   TY    D
Sbjct: 792 QRDPDDPTLTESVDVLAPGIGEVLGGSMRMYKYDELL-----DAYKREGLDASTYYWYTD 846

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                       G  +G +RL++ +   +++ +    P 
Sbjct: 847 --QRRYGGAPHGGFGLGVERLLVWMLNLDSVKDACLYPR 883


>gi|320583691|gb|EFW97904.1| Cytosolic asparaginyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 549

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 114/352 (32%), Gaps = 49/352 (13%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            +  R  + +++R  ++E    E+    +      G  T 
Sbjct: 225 DPSILMDQRHLTLRGETLSAVMKVRAALLAAIRRVYIEESVTEVTPPCMVQTQVEGGST- 283

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   D+  +  +L  S +   +  L A    ++C   ++R  +     H  E+
Sbjct: 284 -------LFKMDYYGEEAFLTQSSQLYLETCLPA-LGDVYCIQESFRAEKSHTRRHLSEY 335

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E   A  +++ L+     +I    +   +   +   V       P ++     F R 
Sbjct: 336 THIEAELAFVTFDDLLSHIERVITKTVQYVLEDPTAGPLVKQLN---PGFVAPQLPFKRM 392

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
             I+    L+    P+                    + D  +     K+   +G+    +
Sbjct: 393 QYIEALDWLNENGIPNED-------------GEKFKFGDDIAEAAERKMTDTIGV--PIL 437

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           L R+P    S        DPR T+  + L     E+      + D  E    F++E  + 
Sbjct: 438 LTRFPVEIKSFYMKKCVDDPRVTESVDVLMPTVGEITGGSMRIEDTQELLEGFKREGIDA 497

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           K  Y   + +D+     +       G  +G +R++  +     + +    P 
Sbjct: 498 KSYY---WFVDQR----IYGTCPHGGYGLGTERILAWLCNRFTVRDCSLYPR 542


>gi|221057165|ref|XP_002259720.1| asparagine--t RNA ligase [Plasmodium knowlesi strain H]
 gi|193809792|emb|CAQ40496.1| asparagine--t RNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 727

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/407 (13%), Positives = 109/407 (26%), Gaps = 81/407 (19%)

Query: 1   MHQIPSQPW------WNRDF-----HYRRRP-----FLLKRNMIQSSLREYFVENQFIEI 44
           +   PS+ +        ++      H R R          ++ I +    ++ E     I
Sbjct: 335 LRSSPSKHYAISKKYHTKEHLRCFPHLRARTKLYSSVFRLKSDIVTETFNFWREKNCTYI 394

Query: 45  DSMSLQYS-PGNE------------THIRAFSTELIIQDHIR------------------ 73
           ++  L  +                  + R   T +   D                     
Sbjct: 395 NTPVLTSNDCEGAGKLFHATTLMSQVNHRGEHTNVNFHDGYDTDEGCKREVQKEEGYPHE 454

Query: 74  -----------KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLE 121
                      KP YL  S + +  + L      +F     +R        H  EF M+E
Sbjct: 455 GNNPFARDFFKKPCYLNVSSQLAL-ECLCCSMGDVFTLNQCFRAENSNTVRHLSEFLMME 513

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  +   ++      I+   + A  K      +N +     ++         +  I 
Sbjct: 514 VELAFCNLSSIISIAEEYIKAMIKFALYKSEDIDYINEHHDQGLKHKLQNVLQKPFVVIT 573

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               +    +       L  +   + +      +D+  R  +  I              Y
Sbjct: 574 YNEAIHVIKKNMVRTDELPVRTTDLTLEEQKFLTDMHFRSPVVVI-------------NY 620

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P            D +     ++    +       E    I    R  KE +   ++Y  
Sbjct: 621 PQNMKPFYMNLNEDGKTVACMDILLPEVGEVVGGSEREIRIHTLERRMKEKRLDLQLYEP 680

Query: 302 TYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  +L          +G  +G DRL+M +T   NI +V+  P 
Sbjct: 681 -------YLELRRYGNIPHAGFGLGMDRLIMFITSMVNIRDVVPFPR 720


>gi|241833933|ref|XP_002414971.1| asparaginyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215509183|gb|EEC18636.1| asparaginyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 464

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 120/351 (34%), Gaps = 44/351 (12%)

Query: 3   QIPSQPWWNR-DFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIR 60
            + ++    R + H +    +  ++ +    R+Y+    ++E+   ++  +     + + 
Sbjct: 145 MLDNRHLAIRGETHSK---IMFAKSAVMQCFRDYYFSKHYVEVIPPTMVQTQVEGGSTLF 201

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
           +F       ++  +  YL  S +   + ++ +    +FC A ++R  +     H  EFT 
Sbjct: 202 SF-------NYFGEEAYLTQSSQLYLETVIPS-LGDVFCVAQSYRAEQSRTRRHLSEFTH 253

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E      ++++ +    +++    E   +   +   +  NP  +               
Sbjct: 254 IEAECPFLTFDEFLDRIEDLVVGVCERILKSPAAEAVLELNPEFKVPERPFLRMQ----- 308

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                     +  +    +   ++ G      D   +   R +         IN   +L 
Sbjct: 309 --------YSEAIEYLRTHNITKEDGTFYEFGDDIPESPERQM------TDQINRPILLC 354

Query: 240 RYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKK 297
           R+PA   +        DPR T+  +L    + E+      + D  E    F     ++K 
Sbjct: 355 RFPAELKAFYMQKCADDPRLTESADLLMPGVGEIVGGSMRMWDAEELVQAF-----QRKG 409

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           I    Y     ++           G  MGF+R V  V   ++I +V   P 
Sbjct: 410 IDPTPYY---WYIDQRKYGTCPHGGYGMGFERFVTWVLKRHHIRDVCLYPR 457


>gi|213405907|ref|XP_002173725.1| cytoplasmic asparagine-tRNA ligase Nrs1 [Schizosaccharomyces
           japonicus yFS275]
 gi|212001772|gb|EEB07432.1| cytoplasmic asparagine-tRNA ligase Nrs1 [Schizosaccharomyces
           japonicus yFS275]
          Length = 570

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/354 (14%), Positives = 98/354 (27%), Gaps = 53/354 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            L  R     ++R+ +      E+    +      G  T 
Sbjct: 246 DPSVLLDQRHLVIRGETASAVLKVRARALRAVRDTYEALHLTEVTPPCMVQTQVEGGST- 304

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   D+  +P YL  S +   +  L A    +FC   ++R  +     H  E+
Sbjct: 305 -------LFKLDYYGQPAYLTQSSQLYLEASLPA-LGDVFCIQESFRAEKSLTRRHLSEY 356

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E       +E  ++     I    E       +   +       P +      F R 
Sbjct: 357 THVEAELVFLDFETYLQHLEEFICQTVERLLADPVAAPLIKQLN---PGFKMPERPFMRL 413

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
              D    L+  +  D                    + D  +     K+     IN    
Sbjct: 414 KYADAIKYLNEHNILDGE-------------GKQHKFGDDIAEAAERKMTDQ--INRPIF 458

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           L  +P    +      P  P  T+  ++   N+         +D ++     E     K+
Sbjct: 459 LTYFPTELKAFYMKRVPGHPEITESVDVLMPNVGEIVGGSMRIDDMD-----ELLAGYKR 513

Query: 297 KIYNETYPI---DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  + +      D+             G  +G +R +  +     + E    P 
Sbjct: 514 EGIDPSPYYWFTDQR----KYGSAPHGGYGLGLERFLAWLLNRYTVRECCLFPR 563


>gi|332084246|gb|EGI89449.1| lysyl-tRNA synthetase domain protein [Shigella dysenteriae 155-74]
          Length = 235

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 64/167 (38%), Gaps = 7/167 (4%)

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
           V      ++     +     E +T+ EA  +Y         D  D  +       A+  G
Sbjct: 58  VLGTTKVTYGEHVFDFGKPFEKLTMREAIKKY-----RPETDMADLDNFDAAKALAESIG 112

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           I V        I + I  E  E +  +   T +  YPA  S LA     +P  T RFE +
Sbjct: 113 ITVEKSWGLGRIVTEIFDEVAEAH--LIQPTFITEYPAEVSPLARRNDVNPEITDRFEFF 170

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
               E+ N   EL D  +Q  RF++++  K    +E    DED++  
Sbjct: 171 IGGREIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTA 217


>gi|302918386|ref|XP_003052646.1| hypothetical protein NECHADRAFT_91963 [Nectria haematococca mpVI
           77-13-4]
 gi|256733586|gb|EEU46933.1| hypothetical protein NECHADRAFT_91963 [Nectria haematococca mpVI
           77-13-4]
          Length = 581

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/336 (16%), Positives = 116/336 (34%), Gaps = 39/336 (11%)

Query: 20  PFLLKRNMIQSSL-------R----EYFVENQFIEIDSMSLQYSP-GNETHIRAFSTELI 67
           P + KR  +Q ++       R    EY     F++ +   L  +     ++       + 
Sbjct: 254 PVMHKRAPVQQAIADVRMTVRKLFSEYLEARDFVQFEPPCLIGAASEGGSN-------VF 306

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH 126
              +  K  +L  SP+F  +  +A G +++FC    +R        H  EFT L+     
Sbjct: 307 GLPYFDKQAFLAQSPQFYKQYEIAGGRKRVFCIGPVFRAENSNTPRHMTEFTGLDLEMEI 366

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
           E +   +++ +  +        ++  + Q          E          +   + G  +
Sbjct: 367 EDHYHEVREMLEGVLLYIFRGIKERCAEQIALVRTVYPSED---------FLLPEPGKEV 417

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PE 245
                  + LL  +  +    V+ D+  S    + L   I+     +   +LD++P    
Sbjct: 418 RLTFAEGQALLRAEGPEEYRNVSDDEDMSTPQEKALGALIKEKYNTD-FYVLDKFPEGAR 476

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
              A   P +P+ T  ++ +    E+ +    +  P     R       +K I   +  I
Sbjct: 477 PFYALEDPENPKVTNAYDFFMRGQEILSGGQRVHVPATLEARI-----RRKGIDPTSQGI 531

Query: 306 DEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNI 339
            E ++       +P   G  +G DR+V       ++
Sbjct: 532 KE-YVDIFRSAGVPPHGGGGIGLDRVVAWYLNLPSV 566


>gi|240102785|ref|YP_002959094.1| asparaginyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|259511571|sp|C5A4R8|SYN_THEGJ RecName: Full=Asparaginyl-tRNA synthetase; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|239910339|gb|ACS33230.1| Asparaginyl-tRNA synthetase (asnS) [Thermococcus gammatolerans EJ3]
          Length = 430

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/350 (14%), Positives = 108/350 (30%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +  +    R    +    +  +  +  + RE+ +++ + E+    L       T      
Sbjct: 115 LDVRHLHLRS--PKVASIMKVKGTLMQAAREWLLQDGWYEVFPPILV------TGAVEGG 166

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           + L    +  K  YL  S +   +  +    EK++    ++R  +     H  EF  LE 
Sbjct: 167 STLFKLKYFDKTAYLSQSAQLYLEAAIFG-LEKVWSLTPSFRAEKSRTRRHLTEFWHLEL 225

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A      +MK    ++    +   +                   +  E F +      
Sbjct: 226 EAAWMDLWDIMKVEEELVSYMVQRTLEL----------------RRSEIETFRKDLTTLK 269

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                 P +          Q  G+ +   +       R+L E+ E          +  YP
Sbjct: 270 NAVPPFP-RISYDEAIDILQSKGVEIEWGEDMGADEERVLTEEFEA------PFFVYGYP 322

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKKIY 299
               +      P DPR     +     +       E++   ++   ++K  +   ++ + 
Sbjct: 323 KHIKAFYMKEDPEDPRKVLAAD-----MLAPEGYGEIIGGSQREDNYDKLIQRILEEGMD 377

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            + Y   E +L          SG  +G +RLV  V   +++      P +
Sbjct: 378 PKDY---EWYLDLRKYGSVPHSGFGLGLERLVAWVLKLDHVRWATLFPRT 424


>gi|126321623|ref|XP_001366376.1| PREDICTED: similar to asparaginyl-tRNA synthetase [Monodelphis
           domestica]
          Length = 548

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/332 (16%), Positives = 109/332 (32%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+++    R++F +  + EI   +L      G  T        L   D+  +  +L
Sbjct: 245 ILKVRSVVTGCFRDHFFDRGYYEITPPTLVQTQVEGGAT--------LFKLDYFGEDAFL 296

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A    +FC A ++R  +     H  E+T +E      +++ L+    
Sbjct: 297 TQSSQLYLETCIPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFDDLLNRLE 355

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +   +    + NP   P          R    D    L   D       
Sbjct: 356 DLVCDVVDRILKSPAASLLYDLNPTFTPPKRPF----KRMNYSDAIVWLKEHDVK----- 406

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 407 ----KEDGTYYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 456

Query: 257 RFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           R T+  + L     E+      + D  E    ++     +++I    Y    D       
Sbjct: 457 RLTESVDVLMPNVGEIVGGSMRIWDGEELLKGYK-----REEIDPTPYYWYTD--QRKYG 509

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I +V   P 
Sbjct: 510 TCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 541


>gi|156555390|ref|XP_001605382.1| PREDICTED: similar to ENSANGP00000013871 [Nasonia vitripennis]
          Length = 468

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 58/354 (16%), Positives = 113/354 (31%), Gaps = 51/354 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI------- 59
           H R R       +  R++  +++R++F +  FI I +  L  +      E  I       
Sbjct: 138 HLRPRTKAFSSTMRLRDLATNAIRDHFRDRGFINIHTPILTSNDCEGAGEVFIIQPNSQE 197

Query: 60  --RAFSTE--LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL-HQ 114
             +A  TE   +   +     +L  S +   +    A   K++ F+ A+R        H 
Sbjct: 198 LVQAMKTEGVDVESTYFNSKAFLTVSGQLHLEACARA-LSKVYNFSPAFRAENTKSRLHL 256

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF M+E   A  +  + +     ++    +     +    + +      PE        
Sbjct: 257 SEFYMIEAEMAFIASLKDLATEAELL---VKSVTFSLIEKGSSDLQVLEAPE---PTWLN 310

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             +  I     LD  D+    L +                 +  ++     +  +LG   
Sbjct: 311 KDFGYITYTEALDILDKNSDRLTF------------PIKPGEGLAKEHELFLVHHLGDVP 358

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             + +     +         D    +  +L A  +          D            + 
Sbjct: 359 VFVTEWPVNSKPFYMKECEDDKSKVQAMDLLAPTVGELIGGSVREDNY---------SKL 409

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           K KI      +D  +L         ++G  MGF+R + L++G  NI +VI  P 
Sbjct: 410 KSKI-PPGLNLDW-YLELRKFGNVPTAGFGMGFERYLQLISGVPNIKDVIPFPR 461


>gi|195161006|ref|XP_002021361.1| GL25284 [Drosophila persimilis]
 gi|194118474|gb|EDW40517.1| GL25284 [Drosophila persimilis]
          Length = 517

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 110/354 (31%), Gaps = 54/354 (15%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
             D     R  +++          R+++  + R+++ +  + E+   +L      G  T 
Sbjct: 194 LPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRDHYFDRGYNEVTPPTLVQTQVEGGST- 252

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L       +  +L  S +   +  L A    +F  A ++R  +     H  E+
Sbjct: 253 -------LFKMQFFGEEAFLTQSSQLYLETCLPA-LGDVFTIAQSYRAEQSRTRRHLAEY 304

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      SY+ L+    +++    +   +  +    +  NP  +P            
Sbjct: 305 THVEAECPFISYDDLLDRLEDLVCDVVDRVLKSPYGHLVMELNPDFKPPKKPFRRM---- 360

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCC 235
                          D        ++  +       +   +        K+     IN  
Sbjct: 361 ---------------DYAAAIEWLKKNNVTKDDGTFYEFGEDIPEAPERKMTDT--INEP 403

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQ 293
            +L R+P    S   +  P D R T+  + L     E+      + D  E  + ++    
Sbjct: 404 ILLCRFPVAIKSFYMSRCPEDKRLTESVDVLLPNVGEIVGGSMRIWDSEELLNGYK---- 459

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++ I    Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 460 -REGIDPTPYYWYTD--QRIYGTIPHGGYGLGLERFLCWLLNRYHIREVCLYPR 510


>gi|322502605|emb|CBZ37688.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 890

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 104/339 (30%), Gaps = 39/339 (11%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+ +    RE+F  +Q+ E+   +L      G  T        L    +  +  YL
Sbjct: 572 VLKVRHELLRVFREHFWSHQYYEVTPPTLVQTQVEGGST--------LFEVLYYGEKAYL 623

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +    + + A    ++C   ++R        H  EFT LE            +D +
Sbjct: 624 TQSSQLYL-ESVTASLGNVYCCMPSYRAERSKTKRHLSEFTHLEAEY----DVCSFEDLL 678

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           N +        + +           +  + I            D       P +P R L 
Sbjct: 679 NHLEGMFCTVIRTVIERVGDLVAMLNPSQLIDPNGNVR-----DPANYKFTPKRPFRRLR 733

Query: 198 YLQAQQ-------AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALA 249
           Y  A Q                 + +  +      +   LG      +  +PA   S   
Sbjct: 734 YADAIQFCNENGILNTETGKPFEFGEDITDQPERAMVAKLGE--FVFMTHFPASMKSFYM 791

Query: 250 NIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
              P DP  T+  ++ A  I E+      +    E       +  +++ +   TY    D
Sbjct: 792 QRDPDDPTLTESVDVLAPGIGEVLGGSMRMYKYDELL-----DAYKREGLDASTYYWYTD 846

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                       G  +G +RL++ +   +++ +    P 
Sbjct: 847 --QRRYGGAPHGGFGLGVERLLVWMLNLDSVKDACLYPR 883


>gi|255086573|ref|XP_002509253.1| predicted protein [Micromonas sp. RCC299]
 gi|226524531|gb|ACO70511.1| predicted protein [Micromonas sp. RCC299]
          Length = 624

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 88/282 (31%), Gaps = 19/282 (6%)

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH 126
             D   +P +L  S + + +    A    ++ F   +R        H  EF M+E   A 
Sbjct: 354 SHDFFSEPTFLTVSGQLNVETYACA-MTSVYTFGPTFRAENSNTTRHLAEFWMIEPEIAF 412

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              +  M+   + ++       +            + +       EA  R  ++      
Sbjct: 413 ADLQDDMQCAEDYVKYCLNYVLEHCPEDLAFISKMYDK-------EALDRVKHVAASPFG 465

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
                    LL  +A   G    +   W    +      +   +      I+  YP    
Sbjct: 466 RVSYTEAIELL-KKAVADGKEFVYPVEWGIDLATEHERYLAEEIFKKPV-IVYNYPKDIK 523

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           A       D +     ++    +       EL+   ++  R E       ++  E     
Sbjct: 524 AFYMRLNEDGKTVAAMDVLVPKV------GELIGGSQREERLEVMEGRMHEMGLEPEEY- 576

Query: 307 EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E ++          SG  +GF+RL++  TG +NI +VI  P 
Sbjct: 577 EWYMDLRRYGSVVHSGFGLGFERLILFCTGMDNIRDVIPYPR 618


>gi|229918419|ref|YP_002887065.1| aspartyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|259511860|sp|C4L535|SYD_EXISA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229469848|gb|ACQ71620.1| aspartyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 590

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 73/219 (33%), Gaps = 14/219 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+   +++R +  E +F+E+++  L   +P     ++            
Sbjct: 133 RRPALQETFRLRSKTSNTIRNFLTEQEFLEVETPILTKSTPEGARDYLVPSRVHGGEFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 193 LPQ------SPQLFKQLLMVAGFDRYFQIARCFRDEDLRADRQPEFTQVDIETSFMDIED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           LM    +++    E    +  +         +E      ++       ++L    D    
Sbjct: 247 LMAMMESMMGQVMESTLGRTDTPAKFERMTHAEAMRRFGSDKPDTRFGLELIDVADAVKG 306

Query: 192 PDRHLLYLQAQQAG------IRVAHDDTWSDIFSRILIE 224
               +     +  G      ++   D+       ++   
Sbjct: 307 AGFKVFDAALESNGQVKAINVKGEADNFSRKDIDKLQEF 345



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 9/121 (7%)

Query: 231 GINCCTILDRYPAPESALANIY--PADPR--FTKRFELYACNIELCNACDELLDPIEQRH 286
             +     + +P       +++    DP       ++L     EL      + +   Q  
Sbjct: 440 EEDGRFYANHHPFTMPNREDLHLLETDPASVRAVAYDLVLNGYELGGGSQRIYERDIQER 499

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            F    +       E        L       P  +GIA+G DRLVM++ G +N+ + I  
Sbjct: 500 MF----KLLGFTQEEAVEQFGFLLEAFEYGTPPHAGIALGLDRLVMILAGRSNLRDTIAF 555

Query: 346 P 346
           P
Sbjct: 556 P 556


>gi|119480319|ref|XP_001260188.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Neosartorya
           fischeri NRRL 181]
 gi|119408342|gb|EAW18291.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Neosartorya
           fischeri NRRL 181]
          Length = 574

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 103/354 (29%), Gaps = 53/354 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +    Y  R            +  R     + R+ F E + +E+   ++      G  T 
Sbjct: 250 DPQTLYDNRHLVLRGETSSAVMKVRAACLKAFRQVFEEKRMLEVTPPAMVQTQVEGGST- 308

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   D+  +  YL  S +   +  L +    +FC   ++R  +     H  E+
Sbjct: 309 -------LFKFDYYGEDAYLTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEY 360

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++  L+     +I    E+      +   +       P++   +  F R 
Sbjct: 361 THIEAELDFITFTDLLDHLEEVICRVIELTLADPATAALIKQLN---PDFKPPSRPFRRM 417

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
              D    L   D P+                    + D  +     K+     IN    
Sbjct: 418 KYADAIQWLVEHDIPNEE-------------GKPHQFGDDIAEAAERKM--TDIINQPIF 462

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           L  +PA   +      P D R T+  ++    +         +D  +     E     K 
Sbjct: 463 LTHFPAEIKAFYMKKDPEDRRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMAAYKH 517

Query: 297 KIYNETYPI---DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  + T      D+             G  +G +R +  +     + +    P 
Sbjct: 518 EGMDPTPYYWYTDQR----KYGTSPHGGYGLGLERFLAWLCARYTVRDCCLYPR 567


>gi|146099196|ref|XP_001468582.1| asparaginyl-trna synthetase [Leishmania infantum]
 gi|134072950|emb|CAM71669.1| putative asparaginyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 890

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 104/339 (30%), Gaps = 39/339 (11%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+ +    RE+F  +Q+ E+   +L      G  T        L    +  +  YL
Sbjct: 572 VLKVRHELLRVFREHFWSHQYYEVTPPTLVQTQVEGGST--------LFEVLYYGEKAYL 623

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +    + + A    ++C   ++R        H  EFT LE            +D +
Sbjct: 624 TQSSQLYL-ESVTASLGNVYCCMPSYRAERSKTKRHLSEFTHLEAEY----DVCSFEDLL 678

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           N +        + +           +  + I            D       P +P R L 
Sbjct: 679 NHLEGMFCTVIRTVIERVGDLVAMLNPSQLIDPNGNVR-----DPANYKFTPKRPFRRLR 733

Query: 198 YLQAQQ-------AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALA 249
           Y  A Q                 + +  +      +   LG      +  +PA   S   
Sbjct: 734 YADAIQFCNENGILNTETGKPFEFGEDITDQPERAMVAKLGE--FVFMTHFPASMKSFYM 791

Query: 250 NIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
              P DP  T+  ++ A  I E+      +    E       +  +++ +   TY    D
Sbjct: 792 QRDPDDPTLTESVDVLAPGIGEVLGGSMRMYKYDELL-----DAYKREGLDASTYYWYTD 846

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                       G  +G +RL++ +   +++ +    P 
Sbjct: 847 --QRRYGGAPHGGFGLGVERLLVWMLNLDSVKDACLYPR 883


>gi|116515154|ref|YP_802783.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116257008|gb|ABJ90690.1| asparaginyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 461

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 113/365 (30%), Gaps = 38/365 (10%)

Query: 3   QIPSQPWWNRDF----HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQY-- 51
            I ++           H R R  L       RN++  SL  +    Q++ + +  +    
Sbjct: 110 PISAKKHTIEHLRKFCHLRPRTNLISAISRIRNIVFQSLNLFLFNKQYLWVSTPIITSLD 169

Query: 52  SPGNETHIRAFSTELIIQDHIRK-------PLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
           + G+ +  +    +   Q             ++L  S + + +    A   K++     +
Sbjct: 170 TEGSSSMFKVSMLDNNNQYTNNNNKKFFKKDVFLTVSGQLTLEAYACA-LSKVYSLGPIF 228

Query: 105 RNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R        H  EF MLE  +A  +   + K    +++ +         S         +
Sbjct: 229 RAENSNTKKHLTEFWMLEVEKAFSNINDISKFAEKLLKFSISYVLDNCISDLIFLQKKLN 288

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
                 + +   +           +    +   +    Q+       +  W +  S    
Sbjct: 289 RNIISYLNDFLYK-----------DFINIEYSEVINILQKNKNSSYENINWGEDLSSSHE 337

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           + +          I+  YP    A      +D +    F++   NI       E  D I 
Sbjct: 338 KYLVHKY-FKSTVIVRNYPRLLKAFYMRMNSDNKTVAAFDILVPNIGEIIGGSEREDRIM 396

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
              +       K  + ++ Y   +D           SG  +G +RL++ +TG  NI E I
Sbjct: 397 YLEK----NMNKVGLNSKNYSWYKDLRK--YGTIPHSGFGLGLERLIIFITGIKNIRESI 450

Query: 344 WTPFS 348
             P +
Sbjct: 451 PFPRT 455


>gi|70925537|ref|XP_735446.1| lysine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56509114|emb|CAH78729.1| lysine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 214

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 18/156 (11%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D  Y+ R               ++ R  I   +R + ++ +++E+D+ 
Sbjct: 58  LLPLPDKYKGMKDIEYKYRKRYLDFLTNNEQKEKIITRFNITQEIRRFLLKKKYLEVDTP 117

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKK-LLAAGEEKIFCFAHAWRN 106
            LQ  PG     + F T L     +   LYL+ +PE   KK +++   EKIF  +  +RN
Sbjct: 118 MLQLLPGGA-LAKPFETYLKS---LDLVLYLRIAPELFLKKLIISGISEKIFELSKCFRN 173

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
                +H PEFT+LE Y+A+ +Y+ +MK    +I+ 
Sbjct: 174 EGLSTIHNPEFTILEIYKAYANYKYMMKFTKTLIKN 209


>gi|70989689|ref|XP_749694.1| cytoplasmic asparaginyl-tRNA synthetase [Aspergillus fumigatus
           Af293]
 gi|66847325|gb|EAL87656.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           fumigatus Af293]
 gi|159129102|gb|EDP54216.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           fumigatus A1163]
          Length = 574

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 103/354 (29%), Gaps = 53/354 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +    Y  R            +  R     + R+ F E + +E+   ++      G  T 
Sbjct: 250 DPQTLYDNRHLVLRGEISSAVMKVRAACLKAFRQVFEEKRMLEVTPPAMVQTQVEGGST- 308

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   D+  +  YL  S +   +  L +    +FC   ++R  +     H  E+
Sbjct: 309 -------LFKFDYYGEDAYLTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEY 360

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++  L+     +I    E+      +   +       P++   +  F R 
Sbjct: 361 THIEAELDFITFTDLLDHLEEVICRVIELTLANPATAALIKQLN---PDFKPPSRPFRRM 417

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
              D    L   D P+                    + D  +     K+     IN    
Sbjct: 418 KYADAIQWLVEHDIPNEE-------------GKPHQFGDDIAEAAERKM--TDIINQPIF 462

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           L  +PA   +      P D R T+  ++    +         +D  +     E     K 
Sbjct: 463 LTHFPAEIKAFYMKKDPEDRRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMAAYKH 517

Query: 297 KIYNETYPI---DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  + T      D+             G  +G +R +  +     + +    P 
Sbjct: 518 EGMDPTPYYWYTDQR----KYGTSPHGGYGLGLERFLAWLCARYTVRDCCLYPR 567


>gi|302418328|ref|XP_003006995.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261354597|gb|EEY17025.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 730

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 109/341 (31%), Gaps = 43/341 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H   +     R+ I  + RE   +  F+E+ +  LQ +   E+    F       ++  
Sbjct: 254 RHPANQALFRVRHTITRTFRESLEKQNFMEMHTPKLQPAA-TESGASVFKV-----NYFG 307

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQL 132
           +  +L  SP+ + +  ++A   +++     +R        H  E+T L+     +     
Sbjct: 308 RRAFLAQSPQLAKQMAISADFGRVYEIGPVFRAENSNTHRHLTEYTGLDLEMTIQDDYHE 367

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +   ++ +      A Q          +   E    +  E       I     +      
Sbjct: 368 LIKILDCVLKDIFTAAQ-----AMPELDVVRERWPSSPIEWLEETPIIPFAEGIQMLRDD 422

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
            R +     ++  +    +    ++                   ILD++P          
Sbjct: 423 GRDV-----EEEDLSTRDEIRLGELV---------KEKYKTDYYILDKFPKSARPFYTHK 468

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             DP++T  F+++    E+C     + D  E R            I  +      ++L  
Sbjct: 469 AEDPKWTNSFDIFVRGQEICTGGQRINDAAELRASMVD-----AGISEDDM---AEYLTA 520

Query: 313 LT-EMP-QSSGIAMGF---DRLVMLVTG-ANNIN---EVIW 344
               +    +G A+G+    RL M++     +I    EVI 
Sbjct: 521 FDLGIWRHHTGAAVGYVKQGRLAMVIGDPLCDIRQYAEVIP 561


>gi|47208664|emb|CAF88671.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 460

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 101/332 (30%), Gaps = 34/332 (10%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS---TELIIQDHIRKPLY 77
            L  R+ +    R++F    + E+   +   S  ++          + L   ++  +  Y
Sbjct: 151 ILRVRSTVTQCFRDHFFSRGYYEVR-PTEHRS--SDAGADPGGGCGSTLFSLNYFGEQAY 207

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  S +   +  + A     FC A ++R  +     H  E++ +E      S++ L+   
Sbjct: 208 LTQSSQLYLETCIPA-LGDTFCIAQSYRAEQSRTRRHLSEYSHVEAECPFISFDDLLNRL 266

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
            +++    +   +        + NP  +P                           +   
Sbjct: 267 EDLVCDVVDRVLKSPAGELLHDINPTFKPPKRPFRRM-------------------NYTE 307

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPAD 255
                ++ GI+      +          +      IN   +L R+PA   S        D
Sbjct: 308 AIEWLREHGIKKDDGTFYEFGEDIPEAPERVMTDTINEPILLCRFPAEIKSFYMQRCSED 367

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
            R T+  ++   N+         +   +     E     ++ I    Y    D       
Sbjct: 368 KRLTESVDVLMPNVGEIVGGSMRI--WDSEELLEGY--RREGIDPTPYYWYTD--QRKYG 421

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +   ++I +V   P 
Sbjct: 422 TCPHGGYGLGLERFLTWLLNRHHIRDVCLYPR 453


>gi|293364076|ref|ZP_06610812.1| asparagine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552566|gb|EFF41340.1| asparagine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 451

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 113/346 (32%), Gaps = 30/346 (8%)

Query: 12  RDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI- 67
               +R +     +L R+++   + +YF+ + +  + S  +  +   E     F+     
Sbjct: 121 PHIRHRTKTLKSAMLIRSVLAQEIHKYFIAHDYFLMASPIITSND-GEGAGETFNVSDDS 179

Query: 68  --IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
                 + K   L  + +   +       +K++ FA  +R        H  EF M+E   
Sbjct: 180 KEPFFGLNKKATLGVTGQLHAESYAIG-FKKVYTFAPTFRAEHSNTKKHAAEFWMVEPEI 238

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A      ++    ++++        K             E +++         A +DL  
Sbjct: 239 AFYKLNDVVNLADHMLKTVIRNTLAKC----------KFEFDFLEENVDSELRARLDLFI 288

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                       +    +   I    D  +    +      I      N    +  +P  
Sbjct: 289 NNKLSIIDYTQAIKELQKVKDIFENQDIEFGLDLATEHERYIAEK-LFNGPVAVINFPKA 347

Query: 245 ESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
             A       D +    F+L    I EL       +   +   R ++    K    +  +
Sbjct: 348 FKAFYMHQNDDNKTVAAFDLLVPGIGELIGGSQREVRYEKLLERVKE---LKIDQEDLQW 404

Query: 304 PID-EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +D   F    +    SSG  +GF+RLVM VTG +NI +VI  P +
Sbjct: 405 YLDLRRFGD--SG---SSGFGLGFERLVMYVTGLDNIRDVIPYPRT 445


>gi|71746658|ref|XP_822384.1| aspartyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|70832052|gb|EAN77556.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei]
          Length = 541

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 56/416 (13%), Positives = 119/416 (28%), Gaps = 86/416 (20%)

Query: 3   QIPSQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDSM- 47
            +P  P  +++     R                +   +    S R   +   F+E+ +  
Sbjct: 136 PLPF-PLHDQNAKLDTRLNNRYIDMRTPLAVAMIRLVSAAAQSFRTQLLSRDFVELHTPK 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +    + +          D+  +  +L  SP+   +  +     ++F     +R  
Sbjct: 195 IIGTASEGGSAL-------FSLDYFGRQAFLAQSPQLYKQMAIMGDGMRVFEIGPVFRAE 247

Query: 108 EQ-GCLHQPEFTMLE-------WYRAHES---------YEQLMKDCMNIIRCAAEVANQK 150
           +     H  EFT L+       +Y                +L  +    I  A     + 
Sbjct: 248 KSLTHRHLTEFTGLDAEFTVDEFYTELLDVLESILCGMIWKLQTENAEWISQARAALMEL 307

Query: 151 IFSFQNVNCNPFSEPEYITVAE-----AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
             +       P  E     VAE        R+ +         P +P     + +   +G
Sbjct: 308 DSTEDCGTVVPRREDIVCEVAEEIIAMYNIRFDDAASRIAPSVPTEPSEDRYHARIGTSG 367

Query: 206 IRV-------------AHDDTWSDIFSRILIEKIEP-------------------NLGIN 233
            +V              +D   +     ++ E  E                      G++
Sbjct: 368 PKVLRMTFRDALQLIRDNDHQHAGRQQEVVGESDEEVVVDFNLNQERALGELIRLRYGVD 427

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +     A        +P++      F++Y    E+C+    + D  +  H  E+   
Sbjct: 428 LYVVDQFPLAARPFYTMPHPSEEGVACGFDMYLRGEEICSGGQRIHDVAQLIHSMEQ--- 484

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  E   +  D++           G  +G +R+V+ + GA +I  V   P  
Sbjct: 485 ----RRMEAAHM-RDYVDSFRYGAWPHGGFGLGLERIVLFLLGARDIRRVSLFPRD 535


>gi|168020316|ref|XP_001762689.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686097|gb|EDQ72488.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 554

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 81/285 (28%), Gaps = 18/285 (6%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRA 125
              D   +  +L  S +   +    A    ++ F   +R        H  EF M+E   A
Sbjct: 277 FGADFFARQAFLTVSGQLQVETYACA-LSNVYTFGPTFRAENSHTTRHLAEFWMIEPEIA 335

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE-PEYITVAEAFARYANIDLGT 184
               +  M    + +R   +              + + +         A   +  I    
Sbjct: 336 FADLQDDMNCAEDYVRFMCQWLLDHCLEDMKFISSMYDKTAVDRLKLVASTPFVRITYTE 395

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
            ++  ++       +  ++   +V      +    R L E+I     I     +  YP  
Sbjct: 396 AIEILEKARTSKCGVTEKKFENKVEWGIDLASEHERYLTEEIYKKPVI-----VYNYPKD 450

Query: 245 ESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
             A        +        L     EL               R ++             
Sbjct: 451 IKAFYMRLNDDEKTVAAMDVLVPKVGELVGGSQREERQDVLERRLKEMNL--------PM 502

Query: 304 PIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              E ++        + +G  +GF+R+++  TG  NI +VI  P 
Sbjct: 503 EPYEWYIDLRRHGTVKHAGFGLGFERMILFATGLENIRDVIPFPR 547


>gi|308809425|ref|XP_003082022.1| asparaginyl-tRNA synthetase 1, cytoplasmic / asparagine-tRNA ligase
           1 (ISS) [Ostreococcus tauri]
 gi|116060489|emb|CAL55825.1| asparaginyl-tRNA synthetase 1, cytoplasmic / asparagine-tRNA ligase
           1 (ISS) [Ostreococcus tauri]
          Length = 560

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 84/282 (29%), Gaps = 23/282 (8%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHES 128
           D      +L  S +   +    A    ++ F   +R        H  EF M+E   A   
Sbjct: 291 DFFGGKSFLTVSGQLQVETYACA-LSNVYTFGPTFRAENSNTTRHLAEFWMIEPELAFAD 349

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            +  M+   + ++       +        +   F++    T  +   + A     T    
Sbjct: 350 LQDDMQCAEDYVKFCCNYLLEHCLG----DLEFFAKMYDSTCIDRVRQIA----TTPFGR 401

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
               +   L  +A   G       +W    +      +  +       I+  YP    A 
Sbjct: 402 VSYTEAIELLEKAVADGHEFVFPVSWGIDLATEHERWLAESHFKKPV-IVYNYPKDIKAF 460

Query: 249 ANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--TYPI 305
                  +        L     EL               R ++       +  E  ++ +
Sbjct: 461 YMRLNDDNKTVAAMDVLVPRVGELIGGSQREERLDVLERRMKE-----SGLDPEDYSWYL 515

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           D   L         SG  +GF+RL++L TG +NI +VI  P 
Sbjct: 516 D---LRRF-GTVTHSGFGLGFERLILLCTGMDNIRDVIPYPR 553


>gi|145351957|ref|XP_001420326.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580560|gb|ABO98619.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 563

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 82/280 (29%), Gaps = 19/280 (6%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHES 128
           D      YL  S +   +    A    ++ F   +R        H  EF M+E   A   
Sbjct: 294 DFFGGKSYLTVSGQLQVETYACA-LSNVYTFGPTFRAENSNTTRHLAEFWMIEPELAFAD 352

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
               M+   + +R                +   F++    T  +     A     T    
Sbjct: 353 LNDDMQCAEDYVRFCCNYL----LENCYGDLEFFAKMYDSTCIDRVKEIA----TTPFGR 404

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
               +   L  +A   G    +  +W    +      +          I+  YP    A 
Sbjct: 405 VSYTEAIDLLEKAVADGKEFVYPVSWGIDLATEHERWLAEEHFKKPV-IVYNYPKDIKAF 463

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                 D +     ++    +       EL+   ++  R +   +   +           
Sbjct: 464 YMRLNDDNKTVAAMDVLVPKV------GELIGGSQREERLDVLERRMVECDLVPEEY-SW 516

Query: 309 FLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +L          +G  +GF+RL++L TG  NI +VI  P 
Sbjct: 517 YLDLRRYGTVTHAGFGLGFERLILLCTGMENIRDVIPYPR 556


>gi|156094462|ref|XP_001613268.1| asparagine-t RNA ligase [Plasmodium vivax SaI-1]
 gi|148802142|gb|EDL43541.1| asparagine-t RNA ligase, putative [Plasmodium vivax]
          Length = 668

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 48/383 (12%), Positives = 108/383 (28%), Gaps = 57/383 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST---- 64
           H R R          ++ + +   +++ E     I++  L  +       +   +T    
Sbjct: 286 HLRARTKLYSCVFRLKSDVVAETFKFWRERNCTYINTPVLTSNDCEGAGELFHATTLMSR 345

Query: 65  -----------------------------------ELIIQDHIRKPLYLQTSPEFSCKKL 89
                                                  +D  +KP YL  S + +  + 
Sbjct: 346 RGSGGGGEANGSDGSGGASGIDQRDERPGEPVKGDPPFCRDFFKKPCYLNVSSQLAL-EC 404

Query: 90  LAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           L      +F    ++R  +     H  EF M+E   A  +   ++      I+   + A 
Sbjct: 405 LCCSMGDVFTLNQSFRAEQSNTVRHLSEFLMMEVELAFSNLTSIISLAEEYIKTMVKFAL 464

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ----AQQA 204
            +      ++ +     +    A     +A +     +    +    +        A + 
Sbjct: 465 HQSEDVDYIHEHHDRTLKEKLQAVLQKPFAVVTYDEAMQIVKRHVGRVGVAVDPHVAART 524

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFEL 264
            +                 ++    +      ++  YP           AD +     ++
Sbjct: 525 DVSQRGGAPPPRADLTFEEQRFLTEVHFRSPVVVVNYPQEIKPFYMALNADGKTVACMDV 584

Query: 265 YACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAM 324
              ++       E    I    R  KE +   ++Y     +              +G  +
Sbjct: 585 LLPHVGEVVGGSEREIRIHTLERRMKEKRLDLRLYEPYLQL------RRQGNVPHAGFGL 638

Query: 325 GFDRLVMLVTGANNINEVIWTPF 347
           G DRL+M +T  +NI +V+  P 
Sbjct: 639 GVDRLIMFLTSMSNIRDVVPFPR 661


>gi|296814996|ref|XP_002847835.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238840860|gb|EEQ30522.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 560

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 93/334 (27%), Gaps = 24/334 (7%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +  +   + +     EY +++    I +       G  T   +         + ++  Y
Sbjct: 242 SQAIMAISSGVAQLFSEYMLKSGSRWIFT---SKITGAATEGGSGV---FEISYFKRKAY 295

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  +A     +F     +R  +     H  EF  L++ R  + +   + D 
Sbjct: 296 LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNTHRHLTEFIGLDFERTFQKHYHEVLDF 355

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +        +  F  +                    +   +     L    +    +
Sbjct: 356 AENLLVFILSELKIRFKDEIAVVQKSYPKAGEFKLPKDGKALRLKYMEALGFLKEAGVDV 415

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
              +  +     A +     I                   ++D++P+          P D
Sbjct: 416 SEQERFENDFTTAMEKQLGRIIREKYD---------TDFYVVDKFPSAVRPFYTKSCPDD 466

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P F+  ++ +    E+ +    + D  E             +         ED++     
Sbjct: 467 PTFSNSYDFFMRGEEIMSGAQRINDAKELEE------AMVARGVEPNQEGFEDYINAFRQ 520

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +G  +G +R+V    G  NI      P  
Sbjct: 521 GCSPHAGGGLGLNRIVQFFLGLPNIRLATLFPRD 554


>gi|71020717|ref|XP_760589.1| hypothetical protein UM04442.1 [Ustilago maydis 521]
 gi|46100477|gb|EAK85710.1| hypothetical protein UM04442.1 [Ustilago maydis 521]
          Length = 583

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 50/360 (13%), Positives = 102/360 (28%), Gaps = 65/360 (18%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           + +    RR            L  R+ +  + R  F      E+    +  +     + +
Sbjct: 259 DPNSLADRRHLVIRGETASAVLKVRSEVLKAFRAEFDHLGMTEVTPPCMVQTQVEGGSTL 318

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFT 118
            +F       D+  +P YL  S +   +  L +    +FC   ++R  +     H  E+T
Sbjct: 319 FSF-------DYYGQPAYLTQSSQLYLETCLPS-LGDVFCVQESFRAEKSHTRRHLSEYT 370

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF------QNVNCNPFSEPEYITVAE 172
            LE   A  S++ L++    +I        Q   +             P      +   E
Sbjct: 371 HLEGELAFISFDDLLEHLEQLICGTLSRVLQDPKTKALLDQLNPNFKMPTRPFRRMDYKE 430

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
           A     + ++      P +    +     ++                            +
Sbjct: 431 AIKWLNDHNIPNEDGEPHKIGDDIAEAAERKM------------------------TDEL 466

Query: 233 NCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEK 290
           N    L R+P    S        D  FT   ++    + E+      + D  E       
Sbjct: 467 NVPIFLCRFPREIKSFYMKRTEGDEEFTDSVDVLMPGVGEIVGGSMRMADQHELLE---- 522

Query: 291 EMQEKKKIYNET---YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               K +  +     +  D+          +  G  +G +R +  +T    + E    P 
Sbjct: 523 --AYKNEGIDAAPYFWYTDQR----KYGTCEHGGYGLGVERFLAWLTNRWTVREASLYPR 576


>gi|302656134|ref|XP_003019823.1| hypothetical protein TRV_06111 [Trichophyton verrucosum HKI 0517]
 gi|291183595|gb|EFE39199.1| hypothetical protein TRV_06111 [Trichophyton verrucosum HKI 0517]
          Length = 563

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 93/334 (27%), Gaps = 24/334 (7%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +  +   + +     EY +++    I +       G  T   +         + ++  Y
Sbjct: 245 SQAIMAISSGVAQLFSEYMLKSGSRWIFT---SKITGAATEGGSGV---FEISYFKRKAY 298

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  +A     +F     +R  +     H  EF  L++ R  + +   + D 
Sbjct: 299 LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNTHRHLTEFIGLDFERTFQKHYHEVLDF 358

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +        +  F  +                    +   +     L    +    +
Sbjct: 359 AENLLVFILSELKVRFKDEIAVVQKSYPKAGEFKLPKDGKALRLKYMEALGFLKEVGVDV 418

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
              +  +     A +     I                   ++D++P+          P D
Sbjct: 419 SEQERFENDFTTAMEKQLGRIIREKYD---------TDFYVVDKFPSAVRPFYTKSCPDD 469

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P F+  ++ +    E+ +    + D  E             +         ED++     
Sbjct: 470 PTFSNSYDFFMRGEEIMSGAQRINDAKELEE------AMVARGVEPNQEGFEDYINAFRQ 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +G  +G +R+V    G  NI      P  
Sbjct: 524 GCAPHAGGGLGLNRIVQFFLGLPNIRLATLFPRD 557


>gi|195998728|ref|XP_002109232.1| hypothetical protein TRIADDRAFT_53048 [Trichoplax adhaerens]
 gi|190587356|gb|EDV27398.1| hypothetical protein TRIADDRAFT_53048 [Trichoplax adhaerens]
          Length = 490

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 99/355 (27%), Gaps = 39/355 (10%)

Query: 11  NRDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFST-- 64
                 R    +  L  R+     L +YF +  +  I S  +  S       +  F+   
Sbjct: 150 FPHLRARTNVFQALLRIRSQACMQLHKYFQDYYYTFIHSPIITSSDCEGAGDL--FTVTP 207

Query: 65  ----------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLH 113
                     +  I D    P +L  S +   + L+++    ++ F  A+R  +     H
Sbjct: 208 KNKENTDRTDDQRINDFFNSPSFLTVSGQLHAEALMSS-LSHVYTFGPAFRAEKSHTRHH 266

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E         +++                 I        + F  P +    + 
Sbjct: 267 LAEFYMIEAESTRFDNMEILISSTEHFVKETIKKLLVICQDDLSLFDGFVPPNHKIALDD 326

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           F  ++            +          +    +      W +         +    G N
Sbjct: 327 FLNFS----------CTRMTYKDAISALEATSKKFTTYPKWGEELQSDHENYLIQMSG-N 375

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
               +  +PA           D +    F        L     EL+    +  RF+  + 
Sbjct: 376 KGLFITDFPAKLRPFYCRKNDDDKTVAAF------DFLVPTIGELIGGSLREERFDLLLN 429

Query: 294 EKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             K            ++        +  G  MGF+R +  + G  NI +V+  P 
Sbjct: 430 NMKTFNISQESY-SWYIDLRRYGTIRHGGFGMGFERFLQFILGLANIRDVMPFPR 483


>gi|307202947|gb|EFN82167.1| Asparaginyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 516

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 113/356 (31%), Gaps = 54/356 (15%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
           Q+ ++    R  +  R   L+ R+++  + R+++ +  + E+   +L      G  T   
Sbjct: 197 QLDNRHIMIRGENTSR--ILIMRSILTQAFRDHYKDRGYYEVTPPTLVQTQVEGGST--- 251

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   D+  +  +L  S +   +  + A    ++C A ++R  +     H  EFT 
Sbjct: 252 -----LFKLDYFGENAFLTQSSQLYLETCIPA-MGDVYCIAQSYRAEQSRTRRHLAEFTH 305

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E      +++ L+    ++I    E   Q          NP  +               
Sbjct: 306 IEAECPFITFDDLLDRLEDLICNVVERVLQSPLGSLVKELNPNFQVPKKPF--------- 356

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                 ++  D  +        ++ G      +   ++  R +         IN   +L 
Sbjct: 357 ----KRMNYSDAIEYLRENNITKEDGSFYEFGEDIPEMPERKM------TDAINEPIMLC 406

Query: 240 RYPAPE-SALANIYPADPRFTKRFEL-------YACNIELCNACDELLDPIEQRHRFEKE 291
           R+PA   S        D R T+  ++                  DE+++           
Sbjct: 407 RFPAEIKSFYMQRCTEDRRLTESVDVLLPNVGEIVGGSMRIWNYDEMMEGYN-------- 458

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              ++ I    Y    D            G  +G +R +  +    +I EV   P 
Sbjct: 459 ---RENIDPTPYYWYTD--QRKYGSCPHGGYGLGLERFLCWLLNRYHIREVCLYPR 509


>gi|254492251|ref|ZP_05105425.1| aspartyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462576|gb|EEF78851.1| aspartyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 595

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 72/213 (33%), Gaps = 18/213 (8%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +        +  L  R+ I   LR Y  ++ F++I++  L   +P     ++    T
Sbjct: 125 RHRYIDLRRPEMQQRLRFRSQITRQLRNYLDDHGFLDIETPILTKATPEGARDYLVPSRT 184

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   
Sbjct: 185 HPGEFFALPQ------SPQLFKQLLMMSGFDRYYQVVRCFRDEDLRADRQPEFTQVDIET 238

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    E+ M     +IR       ++            +    +T AEA  RY   D   
Sbjct: 239 SFVDEEEFMSLMEEMIRSLFANVLEQPLP---------NPFPRMTYAEAQQRY-GSDKPD 288

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
                +  D   L             +D    +
Sbjct: 289 LRIPLELVDVSDLMQAVDFKVFSGPANDERGRV 321



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 5/144 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           V H      +    + E  + +   +        P            +   ++ +++   
Sbjct: 423 VEHGWRPLWVVEFPMFEWDDKSERWHALHHPFTAPRESDVGLLETDPEKCLSRAYDMVLN 482

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             EL      +     Q+   E           E        L  L    P   G+A G 
Sbjct: 483 GTELGGGSIRIHQTEIQKKVLE----LLGIGEEEAQDKFGFLLEALKYGCPPHGGLAFGL 538

Query: 327 DRLVMLVTGANNINEVIWTPFSQS 350
           DRLVML+TG+ +I +V+  P +QS
Sbjct: 539 DRLVMLMTGSASIRDVMAFPKTQS 562


>gi|289810141|ref|ZP_06540770.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 158

 Score =  118 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 4/160 (2%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
           YR H    +LM +  ++++   +    +  S+Q       
Sbjct: 118 YRPHYDMYRLMNEVDDLLQQVLDCQPAESLSYQQAFLRHL 157


>gi|170587864|ref|XP_001898694.1| Asparaginyl-tRNA synthetase, cytoplasmic [Brugia malayi]
 gi|158593964|gb|EDP32558.1| Asparaginyl-tRNA synthetase, cytoplasmic, putative [Brugia malayi]
          Length = 516

 Score =  118 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 107/322 (33%), Gaps = 41/322 (12%)

Query: 32  LREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
           +RE+F    ++E+   +L      G  T        L   D+  +  +L  S +   +  
Sbjct: 223 MREHFYNAGYLEVAPPTLVQTQVEGGST--------LFNLDYFGEQSFLTQSSQLYLETC 274

Query: 90  LAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA- 147
           +      +FC A ++R  +     H  E+  +E      + + LM+    ++    +   
Sbjct: 275 IP-TLGDVFCIAQSYRAEKSRTRRHLAEYAHVEAECPFITLDDLMEKIEELVCDTVDRLL 333

Query: 148 -NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
            +++           F  PE       F R    D              + +LQ      
Sbjct: 334 ADEEAKKLLEHINPKFQPPER-----PFLRMEYKD-------------AIKWLQEHNVEN 375

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELY 265
              +  T+ +  +      +     IN   +L+R+P+   +        D   T+  +L 
Sbjct: 376 EFGNTFTYGEDIAEAAERFMTDT--INKPILLNRFPSEIKAFYMQRDAKDNTLTESVDLL 433

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
              +       E++    +  +F++  +  K +  +  P        L       G  +G
Sbjct: 434 MPGV------GEIVGGSMRIWKFDELSKAFKNVEIDPKPYYWYLDQRLYGTCPHGGYGLG 487

Query: 326 FDRLVMLVTGANNINEVIWTPF 347
            +R +  +T  N+I +V   P 
Sbjct: 488 LERFICWLTNTNHIRDVCLYPR 509


>gi|261187497|ref|XP_002620171.1| asparaginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239594184|gb|EEQ76765.1| asparaginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239606281|gb|EEQ83268.1| asparaginyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327356530|gb|EGE85387.1| asparaginyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 581

 Score =  118 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 105/351 (29%), Gaps = 47/351 (13%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +    Y  R            +  R     + R+ F E   +E+   S+  +     + +
Sbjct: 257 DPHTLYDNRHLVLRGETSSSIIKVRAATLRAFRKVFEEKGMLEVTPPSMVQTQVEGGSTL 316

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
             F       D+  +  YL  S +   +  L +    +FC   ++R  +     H  E+T
Sbjct: 317 FEF-------DYYGEKAYLTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEYT 368

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      S+  L+    ++I    +    +    + V       P +I  +  F R  
Sbjct: 369 HVEAELDFISFTDLLDHLEDMICRVIDTVLSEPLIARYVKELN---PNFIPPSRPFRRMK 425

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
                            + +L+  +         T+ D  +     K+     +N    L
Sbjct: 426 Y-------------AEAIEWLREHEILNEQGKPHTFGDDIAEAAERKM--TDMLNVPIFL 470

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKK 296
             +P    +      P D R T+  ++    + E+      + D  E          +++
Sbjct: 471 THFPVEIKAFYMKKDPEDLRVTESVDVLMPGVGEIVGGSMRMEDWDELMA-----AYKRE 525

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +    Y    D            G  +G +R +  +     + E    P 
Sbjct: 526 GMDPSPYYWYTD--QRKYGTSPHGGYGIGLERFLAWMCARYTVRECCLYPR 574


>gi|169622585|ref|XP_001804701.1| hypothetical protein SNOG_14517 [Phaeosphaeria nodorum SN15]
 gi|160704803|gb|EAT78057.2| hypothetical protein SNOG_14517 [Phaeosphaeria nodorum SN15]
          Length = 352

 Score =  118 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 105/347 (30%), Gaps = 38/347 (10%)

Query: 36  FVENQFIEIDSMSLQYS---PGN-----ETHIRAFSTELIIQDH-------IRKPLYLQT 80
            +   F++     +  S             +  + ST                 P YL  
Sbjct: 2   MLRQDFVQCHPPIITSSDCEGAGEVFTVAPYAPSTSTSEPANQAKEHDDHFFGSPKYLTV 61

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           S +    + LA    K++  +  +R  +     H  EF MLE   A     Q++ + +  
Sbjct: 62  SSQLHL-EALAQSVNKVWTLSPTFRAEKSDTARHLSEFYMLEAELAFVDDLQVVMNVVED 120

Query: 140 I------RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           +         + V  Q++   +  +    +E   ++      R+  +  G       +  
Sbjct: 121 LLRAVATELQSSVVGQELLESRARD--HSTESASLSRDALAQRWQGLIDGPWPRITYEAA 178

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
              L    +Q            D         +  +LG +    +  YP           
Sbjct: 179 LQHLNDAVKQGKAAFEFAPGHEDGLQTEHERYLAESLGRSGPVFVTDYPRNIKPFYMAPS 238

Query: 254 AD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE----- 307
           AD     +     AC   L     EL+    + HR  + ++  +     T  + E     
Sbjct: 239 ADLQAEGQTPSTVACFDLLVPELCELVGGSMREHRLPELLKSMQDHGLPTQGMGETESEV 298

Query: 308 ------DFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  ++           G  +GFDRL+  ++G +NI +V+  P 
Sbjct: 299 ARGSLQWYVDLRRYGSVPHGGFGLGFDRLLCYLSGVSNIRDVVSFPR 345


>gi|58337447|ref|YP_194032.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|58254764|gb|AAV43001.1| asparaginyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
          Length = 414

 Score =  118 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 55/330 (16%), Positives = 93/330 (28%), Gaps = 44/330 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDHRHLWLRSK--KPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVEYFNNDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +    K                     E   +    D
Sbjct: 226 PEMAWMHQDESLDIQERYLAYMVKQVLDKN--------------------EYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFTRLSYDDAIKMLQDAGRDIKWGDDFGAPDEGYISEQY--DRPVFIVNY 323

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIY 299
           P            D                     E+    E+   +E   +  E   + 
Sbjct: 324 PTSIKPFYMKKNPDNPKEYLCADVI----APEGYGEIFGGSEREGNYEVLNQQIEDAGLD 379

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDR 328
            E Y     +L          SG  MGF+R
Sbjct: 380 LEDYQ---WYLDLRKFGGVPHSGFGMGFER 406


>gi|282891418|ref|ZP_06299917.1| hypothetical protein pah_c161o033 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498703|gb|EFB41023.1| hypothetical protein pah_c161o033 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 602

 Score =  118 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 50/338 (14%), Positives = 93/338 (27%), Gaps = 39/338 (11%)

Query: 15  HYRR-RPFLLKRNMIQSSLREYFVE--NQFIEIDSM-SLQYSPGNETHIRAFSTELIIQD 70
             R+ +     +  I  + R +  +     +E  +   +  S            E    D
Sbjct: 124 RNRQIQAIFKIQAEITHAFRLFMHDVVRA-VEYFAPNIIGASSEGGA-------EFFNVD 175

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +      L  S +   K+++    E++F     +R        H  E    E+       
Sbjct: 176 YFGYTATLAQSSQLY-KQIMVGVNERVFALMPFFRAENSQTTRHLAEGKQFEFEMGFFEN 234

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              + D       A     +K  + +                        I     +  P
Sbjct: 235 WHEVMDVQEGCIKAIMSHLEKHCTKEIEVLGKEL----------------IKAPADVAFP 278

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                    +  Q+ GI    +   S    R L    +   G +   + D   +     +
Sbjct: 279 RVTFAEAQEIFFQRTGIDERQEPDLSPAAERELCLYAQEKFGTDLIFVTDWKRSKRPFYS 338

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                 P  T  F+L     E+ +                + + EK+   +      ED+
Sbjct: 339 YPKEDQPELTNTFDLLCAGTEITSGGQRRHTY----ESMVEGILEKEM--DPANF--EDY 390

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L+     MP   G  MG +R+ M +    NI E    P
Sbjct: 391 LSIFKYGMPPHGGFGMGLERITMTILRLKNIRECSLFP 428


>gi|71894437|ref|YP_278545.1| asparaginyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851225|gb|AAZ43834.1| asparaginyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 447

 Score =  118 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 62/353 (17%), Positives = 116/353 (32%), Gaps = 29/353 (8%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           + +IP      R      R  +L R+ +   + +YF++  F  ++S  +  +   E    
Sbjct: 113 LREIP----HLRHRTKVLRAVMLIRSTLAQEIHKYFIDKNFYYMNSPIITSND-GEGAGE 167

Query: 61  AFST---ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPE 116
            F     E+           L  + +   +       +KI+ FA  +R        H  E
Sbjct: 168 TFEVYGSEIKHFFGKNNKATLGVTGQLHGESYAVG-FKKIYTFAPTFRAENSNTKKHLAE 226

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           F M+E   A  +   ++    ++++       +K            SE   I + E    
Sbjct: 227 FWMVEPEVAFANLYDMINLAQDLLKN----VLEKTLEKNKFEFEFLSEFLNINLKERIEL 282

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +   DL           R  +    +        D  +           +  ++   C  
Sbjct: 283 FTKSDLKIVDY------RDAIKELEKHKDKFENKDIKFGLDLGTEHERYLVESI-FKCPI 335

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEK 295
            L  +P    A       D      F+L    + EL       +   + + R  +    +
Sbjct: 336 ALINFPKAFKAFYMHQNDDGNTVAAFDLLIPQVGELIGGSQREVRYEKLKQRINELNISE 395

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           K   +  + +D   L    +M  SSG  +GF+RLV+  TG  NI + I  P +
Sbjct: 396 K---DFKWYLD---LRRFGDMG-SSGFGLGFERLVVYATGIENIRDSIPYPRT 441


>gi|296424997|ref|XP_002842030.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638287|emb|CAZ86221.1| unnamed protein product [Tuber melanosporum]
          Length = 579

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/356 (13%), Positives = 101/356 (28%), Gaps = 57/356 (16%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +    Y  R            L  R  +  + R+ + +   +E+    +  +     + +
Sbjct: 255 DPQTKYDNRHLVIRGDVASSVLKVRASVLRAFRKSYEDLGLLEVTPPCMVQTQVEGGSTL 314

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
             F       ++  +  YL  S +   +  L +    +FC   ++R        H  E+T
Sbjct: 315 FEF-------NYYGEKAYLTQSSQLYLETCLPS-LGDVFCVQESFRAERSLTRRHLSEYT 366

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVA------NQKIFSFQNVNCNPFSEPEYITVAE 172
            +E   A  +++ L+     +I      A        K+         P      +T A+
Sbjct: 367 HIEAELAFITFDDLLNHLEEVICRTINYALTDPLIKGKVAELNPKFEAPERPFMRMTYAD 426

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
           A       ++     NP +    +     ++                            I
Sbjct: 427 AIGWLVENNIPNEEGNPHKFGDDIAEAAERKM------------------------TDII 462

Query: 233 NCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                L ++P    +      PADPR T+  +     +       E++    +    E+ 
Sbjct: 463 AKPIFLTKFPVKIKAFYMKKDPADPRVTESVDCLMPGV------GEIVGGSMRMENLEEL 516

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           M    +      P                G  +G +RL+  +     + E    P 
Sbjct: 517 MGAYAREGISPDPYYWFTDQRKYGTSPHGGYGIGLERLLAWMCDRYTVKECSLYPR 572


>gi|254785044|ref|YP_003072472.1| aspartyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|259511871|sp|C5BPP4|SYD_TERTT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|237684225|gb|ACR11489.1| aspartate--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 600

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 72/193 (37%), Gaps = 21/193 (10%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQD 70
            RR+     L  R+ + +++R Y  E+ F++I++  L   +P     ++    T      
Sbjct: 131 LRRKEMQHNLRFRSKVTNAIRNYLDEHGFLDIETPILTRATPEGARDYLVPSRTHESKFF 190

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    E
Sbjct: 191 ALPQ------SPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFMDEE 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           Q+M     +IR                      +   +  +EA  +Y +      +    
Sbjct: 245 QIMSVTEGMIRKLFNDVLS----------IDLGDFPRMPYSEAMEKYGSDKPDMRIPLEM 294

Query: 191 QPDRHLLYLQAQQ 203
              + L+     +
Sbjct: 295 VEIKDLMKDVEFK 307



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 16/155 (10%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNL--GINCCTILDRYPAPESALANIYPADPRFTK 260
           + G  +            +     E     G+         P+         PA    ++
Sbjct: 414 KLGEDLDLYTCEWAPLWVVDFPMFEETDEGGLTALHHPFTAPSCSPEDLQANPATA-LSR 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFLACLT-E 315
            +++     EL      + +   Q+  F+       ++++K            L  L   
Sbjct: 473 AYDMVLNGTELGGGSVRIHNQDMQQAVFKILGISPEEQREKFG--------FLLDALKFG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            P   G+A G DRL+ML+TGA++I +VI  P +QS
Sbjct: 525 APPHGGLAFGLDRLIMLMTGADSIRDVIAFPKTQS 559


>gi|332376021|gb|AEE63151.1| unknown [Dendroctonus ponderosae]
          Length = 552

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/333 (14%), Positives = 108/333 (32%), Gaps = 42/333 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
            L  R+++  + R+++++  + E+     +Q      +        L   D+  +  YL 
Sbjct: 249 VLRMRSVLLQAFRDHYLDRGYCEVTPPSIVQTQVEGGS-------TLFKLDYFGEEAYLT 301

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S +   +  L +    ++C A ++R  +     H  E+T +E      S+  L+    +
Sbjct: 302 QSSQLYLETCLPSM-GDVYCIAESFRAEQSRTRRHLAEYTHVEAECPFISFNDLLDRLED 360

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +I    +   +  +       NP  +                         D  D    +
Sbjct: 361 LICDVVDRVLKSPYGEIVRELNPNFQVPTRPFMRMN-------------YSDAIDYLKEH 407

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPR 257
              ++ G      +   ++  R +         IN   +L R+PA   S   +  P D R
Sbjct: 408 NITKEDGSFYEFGEDIPEMPERKM------TDEINKPIMLCRFPANIKSFYMSKCPEDVR 461

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET---YPIDEDFLACLT 314
            T+  ++   N+         +   +     E     K++  +     +  D+       
Sbjct: 462 LTESVDVLLPNVGEIVGGSMRI--WDSEELLEGY---KREGIDPAPYFWYTDQR----KY 512

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 G  +G +R +  +    +I EV   P 
Sbjct: 513 GTCPHGGYGLGLERFLCWLLNRYHIREVCLYPR 545


>gi|145234338|ref|XP_001400540.1| asparaginyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS
           513.88]
 gi|134057486|emb|CAK48840.1| unnamed protein product [Aspergillus niger]
          Length = 574

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/360 (14%), Positives = 105/360 (29%), Gaps = 65/360 (18%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +    Y  R            +  R     + R+ F EN+ +E+   ++      G  T 
Sbjct: 250 DPQTLYDNRHLVLRGETASSVMKVRAATLRAFRKTFEENRMLEVTPPAMVQTQVEGGST- 308

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   D+  +  YL  S +   +  L +    +FC   ++R  +     H  E+
Sbjct: 309 -------LFGFDYYGENAYLTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEY 360

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++  L+    N+I                           +T+AE   + 
Sbjct: 361 THIEAELDFITFNDLLDHLENVI----------------------CRVIDLTLAEPATKA 398

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA------HDDTWSDIFSRILIEKIEPNLG 231
               L      P +P + + Y +A +                + D  +     K+     
Sbjct: 399 LIEKLNPDFKPPSRPFKRMKYSEAIEWLREHDIPNEEGKPHEFGDDIAEAAERKM--TDI 456

Query: 232 INCCTILDRYPAPESALANIYP-ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
           IN    L  +PA   A        D R T+  ++    +         +D  +     E 
Sbjct: 457 INQPIFLTHFPAEIKAFYMKKDVEDRRVTESVDVLMPGVGEIVGGSMRMDDWD-----EL 511

Query: 291 EMQEKKKIYNETYPI---DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               K +  + +      D+             G  +G +R +  +     + +    P 
Sbjct: 512 MAAYKHEGMDPSPYYWYTDQR----KYGTSPHGGYGLGLERFLAWLCARYTVRDCSLYPR 567


>gi|195427261|ref|XP_002061695.1| GK17133 [Drosophila willistoni]
 gi|194157780|gb|EDW72681.1| GK17133 [Drosophila willistoni]
          Length = 548

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 107/353 (30%), Gaps = 52/353 (14%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           + D     R  +++          R+++  + R ++ +  + E+   +L      G  T 
Sbjct: 225 HPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRAHYEDRGYNEVTPPTLVQTQVEGGST- 283

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L    +  +  +L  S +   +  L A    +F  A ++R  +     H  E+
Sbjct: 284 -------LFKMQYFGEEAFLTQSSQLYLETCLPA-LGDVFTIAQSYRAEQSRTRRHLAEY 335

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      SY+ L+    +++    +   +  +                         
Sbjct: 336 THIEAECPFISYDDLLTRLEDLVCDVVDRVLKGPYGQLVYE------------------- 376

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCC 235
            N D         + D        +   +R      +   +        K+     IN  
Sbjct: 377 LNPDFKAPKRPFRRMDYADAIKWLKANDVRKDDGTFYEFGEDIPEAPERKMTDT--INEP 434

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            +L R+P    S   +  P D R T+  ++   N+         +   +     +     
Sbjct: 435 ILLCRFPVAIKSFYMSRCPEDQRLTESVDVLLPNVGEIVGGSMRI--WDSEELLKGYA-- 490

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +++I    Y    D    +       G  +G +R +  +    +I +V   P 
Sbjct: 491 REEIDPTPYYWYTD--QRVYGTMPHGGYGLGLERFLCWLLNRYHIRDVCLYPR 541


>gi|258614856|ref|ZP_05712626.1| lysyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 192

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 57/200 (28%), Positives = 84/200 (42%), Gaps = 9/200 (4%)

Query: 92  AGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQK 150
            G EK++     +RN      H PEFTMLE Y A+  +  +M     IIR AA +V    
Sbjct: 1   GGMEKVYEIGRVFRNEGIDTTHNPEFTMLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTA 60

Query: 151 IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH 210
             ++     +  S+ + I + +A      +D    +              A++  + V  
Sbjct: 61  KITYDGQAVDLESDFKRIHMVDAIKEQTGVDFWQEMT------LEEALALAEKHNVEVTE 114

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
                 + +      +E    +   T +  +P   S LA   P DPRFT RFEL+    E
Sbjct: 115 AMGVGHVINEFFETFVEET--LTQPTFVYGHPVEVSPLAKKNPEDPRFTDRFELFIVGRE 172

Query: 271 LCNACDELLDPIEQRHRFEK 290
             NA  EL DPI+QR RFE 
Sbjct: 173 FANAFTELNDPIDQRERFEA 192


>gi|302691556|ref|XP_003035457.1| hypothetical protein SCHCODRAFT_14619 [Schizophyllum commune H4-8]
 gi|300109153|gb|EFJ00555.1| hypothetical protein SCHCODRAFT_14619 [Schizophyllum commune H4-8]
          Length = 490

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 60/362 (16%), Positives = 112/362 (30%), Gaps = 36/362 (9%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE----------T 57
            H R R       L  R+ +  S+ +Y     F+ + +  L  +                
Sbjct: 132 VHLRARTTAIAAMLRLRDCLHRSIHDYLKSQSFVHVHAPILTANDAEGAGETFRIAPVAA 191

Query: 58  HIRAFSTELIIQ-DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
           H  A STE     +    P +L  S +    +   A   +++    A+R        H  
Sbjct: 192 HPDAQSTETQSPTEFFGAPAHLTVSSQLHM-EAFQAALSRVYTANPAFRAERSQTSRHLA 250

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E           + D    +    ++ N+             +    +   EA  
Sbjct: 251 EFWMVEPEWTLTEGITEVCDVTEDL--LRDIVNRAFVECAEDIEALHAVGGRLERLEALK 308

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
              + D               L    Q+ G++     TW    S      +   +     
Sbjct: 309 AAVSPDTLRWRRMTYTEAVETL----QRTGVKFKQTPTWGASLSSEHERYLAEEVVKGPV 364

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEMQE 294
             +  YP    A       DP   +  +  +C   L     EL+    +  R +  E + 
Sbjct: 365 -FVTNYPREIKAFYMRVD-DPSLPREQQTVSCFDLLVPHMGELVGGSVREERADVLEEKM 422

Query: 295 KKKIY---NETYPIDE----DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +++      ++  +DE     +L+          G  +GF+RLV  V   +++ E I  P
Sbjct: 423 REEGMILPEQSSEVDEGPYAWYLSLRKFGATPHGGFGLGFERLVSWVGDVDSVKECIPVP 482

Query: 347 FS 348
            +
Sbjct: 483 RT 484


>gi|126002159|ref|XP_001352279.1| GA10495 [Drosophila pseudoobscura pseudoobscura]
 gi|54640540|gb|EAL29381.1| GA10495 [Drosophila pseudoobscura pseudoobscura]
          Length = 557

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 107/351 (30%), Gaps = 50/351 (14%)

Query: 12  RDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHI 59
            D     R  +++          R+++  + R +++   + E+   +L      G  T  
Sbjct: 235 PDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRAHYLARGYNEVTPPTLVQTQVEGGST-- 292

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 L    +  +  YL  S +   +  L A    +F  A ++R  +     H  E+T
Sbjct: 293 ------LFKLQYFSEEAYLTQSSQLYLETCLPA-LGDVFTIAQSYRAEQSRTRRHLAEYT 345

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      +++ L+    +++    +   +                   +      +  
Sbjct: 346 HIEAECPFLTFDDLLDRLEDLVCDVVDRVLK-------------------SPWGNLVKEL 386

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
           N D         + +        ++  +       +          + +    IN   +L
Sbjct: 387 NPDFKPPTKPFRRMNYSDAIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDAINEPIML 446

Query: 239 DRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            R+PA   S   +  P D   T+  + L     E+      + D  E          +++
Sbjct: 447 CRFPAEIKSFYMSRCPEDKTLTESVDVLLPNVGEIVGGSMRIFDSEELLK-----GYQRE 501

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            I  + Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 502 GIDPKPYYWYTD--QRIYGTLPHGGYGLGLERFLCWLLNRYHIREVCLYPR 550


>gi|225581052|gb|ACN94629.1| GA10495 [Drosophila miranda]
          Length = 557

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/351 (13%), Positives = 107/351 (30%), Gaps = 50/351 (14%)

Query: 12  RDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHI 59
            D     R  +++          R+++  + R +++   + E+   +L      G  T  
Sbjct: 235 PDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRAHYLARGYNEVTPPTLVQTQVEGGST-- 292

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 L    +  +  YL  S +   +  L A    +F  A ++R  +     H  E+T
Sbjct: 293 ------LFKLQYFSEEAYLTQSSQLYLETCLPA-LGDVFTIAQSYRAEQSRTRRHLAEYT 345

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      ++E L+    +++    +   +                   +      +  
Sbjct: 346 HIEAECPFLTFEDLLDRLEDLVCDVVDRVLK-------------------SPWGNLVKEL 386

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
           N D         + +        ++  +       +          + +    IN   +L
Sbjct: 387 NPDFKPPTKPFRRMNYSDAIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDAINEPIML 446

Query: 239 DRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            R+PA   S   +  P D   T+  + L     E+      + D  E          +++
Sbjct: 447 CRFPAEIKSFYMSRCPEDKTLTESVDVLLPNVGEIVGGSMRIFDSEELLK-----GYQRE 501

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            I  + Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 502 GIDPKPYYWYTD--QRIYGTLPHGGYGLGLERFLCWLLNRYHIREVCLYPR 550


>gi|154286286|ref|XP_001543938.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150407579|gb|EDN03120.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 581

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 105/351 (29%), Gaps = 47/351 (13%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +    Y  R            +  R     + R+ F E   +E+   S+  +     + +
Sbjct: 257 DPHTLYDNRHLVLRGETSSSVMKVRAATLRAFRKVFEEKGILEVTPPSMVQTQVEGGSTL 316

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
             F       D+  +  YL  S +   +  L +    +FC   ++R  +     H  E+T
Sbjct: 317 FEF-------DYYGEKAYLTQSSQLYLETCLPS-LGDVFCICPSFRAEKSLTRRHLSEYT 368

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      S+  L+    ++I    EV   +    + V       P++   +  F R  
Sbjct: 369 HVEAELDFISFTDLLDHLEDMICRVIEVVLSEPLIARYVKQLN---PKFTPPSRPFKRMK 425

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             +    L   D  +                   T+ D  +     K+   +  N    L
Sbjct: 426 YSEAIEWLREHDILNEE-------------GSQHTFGDDIAEAAERKMTDMM--NMPIFL 470

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKK 296
             +P    +      P D R T+  ++    + E+      + D  E          +++
Sbjct: 471 THFPVEIKAFYMRKDPEDARVTESVDVLMPGVGEIVGGSMRMEDWDELMS-----AYKRE 525

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +    Y    D            G  +G +R +  +     + E    P 
Sbjct: 526 GMDPSPYYWYTD--QRKYGTSPHGGYGIGLERFLAWMCARYTVRECCLYPR 574


>gi|303312585|ref|XP_003066304.1| asparaginyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240105966|gb|EER24159.1| asparaginyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320033593|gb|EFW15540.1| asparaginyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 578

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 103/351 (29%), Gaps = 47/351 (13%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +    Y  R            +  R  +  + R  F E + +E+   ++  +     + +
Sbjct: 254 DPQTLYDNRHLVLRGEIASSVMKVRAAVIRAFRSAFEEQRMLEVTPPAMVQTQVEGGSTL 313

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
            +F       D+  +P YL  S +   +  L +    +FC   ++R  +     H  E+T
Sbjct: 314 FSF-------DYYGEPAYLTQSSQLYLETCLPS-LGDVFCICPSFRAEKSLTRRHLSEYT 365

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      +++ L+     II    ++          +              +      
Sbjct: 366 HIEAELDFITFDDLLDHLEVIICRVLDLVLADPQIAGYIKSLNPDFKPPSRPFKRMKYAE 425

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            ID     + P++                  +  T+ D  +     K+   +  N    L
Sbjct: 426 AIDWLREHNIPNEE----------------GNPHTFGDDIAEAAERKMTDTM--NQTIFL 467

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKK 296
             +P    +      P D R T+  ++    + E+      + D  E            +
Sbjct: 468 THFPVEIKAFYMRKDPEDLRVTESVDVLMPGVGEIVGGSMRMEDWDELMG-----AYASR 522

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +    Y    D            G  +G +R +  + G   + E    P 
Sbjct: 523 GMDPTPYYWYTD--QRKYGTSPHGGYGLGVERFLAWMCGRYTVRECCLYPR 571


>gi|327308538|ref|XP_003238960.1| asparaginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326459216|gb|EGD84669.1| asparaginyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 550

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 113/392 (28%), Gaps = 55/392 (14%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS 52
           + Q+P         H R R          R+     + E F  +    F+++    +  S
Sbjct: 162 LRQLP---------HLRLRTPFNALLSRLRSEFIYQVTEEFRSHRHLNFVQVQPPLITSS 212

Query: 53  ---PGNETHI---RAFSTELI-IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                 E      R F TE     +  + P YL  S +   +   AA    ++  +  +R
Sbjct: 213 DCEGAGEVFSIKPRDFVTEEGKAIEFFKSPKYLTVSSQLHLEAY-AAELGNVWTLSPTFR 271

Query: 106 NGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNII--RCAAEVANQKIFSFQNVNCNPF 162
             +     H  EF MLE   ++    + +   +  +       V N  +           
Sbjct: 272 AEKSDTPRHLSEFYMLEVEMSYMDSLEPLTAFVETLLRNTTQRVYNSPVARELFSFKVAD 331

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG-IRVAHDDTWSDIFSRI 221
              +  ++A+   R+  +  G                +A   G +      +WS      
Sbjct: 332 DLTKDTSIADLEKRWRALMEGPRWPRITFAHAIKHLDEAVHTGRVAFEFSPSWSGGLQLE 391

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALAN-----IYPADPRFTKRFELYACNI-ELCNAC 275
             + +   +G      +  YP                 +      F+L    I E+    
Sbjct: 392 HEKFLVDTIGKGLPIFVTDYPKAVKPFYMLPSSGSSNENGETVACFDLLLPEICEVVGGS 451

Query: 276 DELL--DPIEQRHRFEKEMQEKKKIYNETYPIDE-----DFLACLT-------------E 315
                  P+ Q  R    ++ K      +  +D        LA                 
Sbjct: 452 LREHRLSPLIQNMREHGLLKLKDSTPEPSAAVDAKAPYPHLLANEELGSIQWYADLRRWG 511

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +GFDR V  + G +++ +++  P 
Sbjct: 512 TVPHGGFGLGFDRFVGYLAGVSSLRDLVPFPR 543


>gi|212532907|ref|XP_002146610.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Penicillium
           marneffei ATCC 18224]
 gi|210071974|gb|EEA26063.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Penicillium
           marneffei ATCC 18224]
          Length = 578

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 112/351 (31%), Gaps = 47/351 (13%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +    Y  R            +  R     + R+ F  ++ +E+   S+  +     + +
Sbjct: 254 DPQTLYDNRHLVLRGETSSSVMKVRAATLKAFRKTFEASRMLEVTPPSMVQTQVEGGSTL 313

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
            +F       D+  +P YL  S +   +  L A    +FC   ++R  +     H  E+T
Sbjct: 314 FSF-------DYYGEPAYLTQSSQLYLETCL-ASLGDVFCICPSFRAEKSLTRRHLSEYT 365

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      +++ L++    +I     V  + +   Q         P++   +  F R  
Sbjct: 366 HIEAELDFITFDDLLEHLEEVIS---RVIEELLADEQTAKLIKELNPDFKVPSRPFRRMR 422

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D    L   D P+                    + D  +     ++     IN    L
Sbjct: 423 YSDAIDWLREHDIPNEE-------------GQPHQFGDDIAEAAERRM--TDIINQPIFL 467

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKK 296
             +PA   +      P DPR T+  ++    + E+      + D  E          +++
Sbjct: 468 THFPAEIKAFYMKKDPQDPRVTESVDVLMPGVGEIVGGSCRIDDWDELIA-----AYKRE 522

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++    Y    D            G  +G +R +  + G   + E    P 
Sbjct: 523 EMDPSPYYWYTD--QRKYGTSPHGGYGLGLERFLAWICGRYTVRECCLYPR 571


>gi|302899207|ref|XP_003048003.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256728935|gb|EEU42290.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 526

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/333 (13%), Positives = 90/333 (27%), Gaps = 42/333 (12%)

Query: 45  DSMSLQYS-PGNETHIRAFSTELIIQDHIRKP-LYLQTSPEFSCKKLLAAGEEKIFCFAH 102
               +  S          F+ +        +   YL  S +    + LA     ++  + 
Sbjct: 199 HPPIITSSDCEGAGEA--FAVKASSPGEFFRDPKYLTVSSQLHL-EALAQALGNVWTLSP 255

Query: 103 AWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK---IFSFQNVN 158
            +R  +     H  EF MLE   +       + D    +  +     ++       +   
Sbjct: 256 TFRAEQSDTSRHLSEFYMLEAEMSFVDDMDEVMDLAQRMLNSLARGLKELNAAKELEQNR 315

Query: 159 CNPFSEPEY------ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
            +     E       +   +   R+  +            +        +    +  H  
Sbjct: 316 VDSKDPAERLAFNDLVDQEQLDRRWRGLLTTKKWPRVTYSE---AIKILEPIADQFEHKP 372

Query: 213 TWSDIFSRILIEKIEPNLGINC------CTILDRYPAPESALANIYPADPRFTKRFELYA 266
           TW         + +   +G +          + +YP    A                   
Sbjct: 373 TWGAGLQSEHEKYLAEKIGYDEATDSSVPIFITQYPREIKAFYM--RQSASSPDAGLTVD 430

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE------------TYPIDEDFLACLT 314
           C   L  +  EL     + HR  +  +  + +  E             + +D        
Sbjct: 431 CFDLLVPSLGELAGGSMREHRLPQLEENMRALGLEVPSKRSPKGKELAWYLDLR----RW 486

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             P   G  +GFDRL+  +TG  N+ +V+  P 
Sbjct: 487 GCPPHGGFGLGFDRLLSYLTGVPNVRDVVAFPR 519


>gi|212638575|ref|YP_002315095.1| aspartyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226735098|sp|B7GFR1|SYD_ANOFW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|212560055|gb|ACJ33110.1| Aspartyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 592

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 76/239 (31%), Gaps = 43/239 (17%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R               R+ +  ++R++  E  F+E+++  L   +P     ++ 
Sbjct: 124 DVRLKYRYLDLRRPVMFQTFKMRHQVTKAIRDFLDEEGFLEVETPILTKSTPEGARDYLV 183

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ AG E+ +  A  +R+ +     QPEFT +
Sbjct: 184 PSRVHPGEFYALPQ------SPQIFKQLLMVAGFERYYQIARCFRDEDLRADRQPEFTQV 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S + ++     ++    +VA     S              ++  EA ARY   
Sbjct: 238 DIETSFMSQDDILAMIERMMARVMKVAKGVDIS---------IPFPRMSYDEAIARY-GS 287

Query: 181 DLGTTLDNPDQPDRHLLYLQA---------------QQAGIRVAHDDTWSDIFSRILIE 224
           D   T    +  D                       +   ++ A D         +   
Sbjct: 288 DKPDTRFGLELVDLSEQVKDCGFKVFASAVQNGGQVKAINVKGAADKYSRKDIDALTEY 346



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 52/154 (33%), Gaps = 19/154 (12%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP--APESALANIYPADPR--F 258
           + G  +   D  +  F  I    +              +P   P       +  DP    
Sbjct: 413 KLGKDLQLIDESAFHFLWITDWPLFEYDEEEGRYYAAHHPFTMPVREDVPKFETDPASVR 472

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLAC 312
            + ++L     EL      + +   Q   F      E++ +E+     E +         
Sbjct: 473 AQAYDLVLNGYELGGGSLRIFERDIQEKMFKTLGFTEEQAREQFGFLLEAFE-------- 524

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA+G DRLVML+ G +N+ + I  P
Sbjct: 525 -YGTPPHGGIALGLDRLVMLLAGRSNLRDTIAFP 557


>gi|289812204|ref|ZP_06542833.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 309

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 93/322 (28%), Gaps = 38/322 (11%)

Query: 44  IDSMSLQYS-PGNETHIRAFSTEL-------------IIQDHIRKPLYLQTSPEFSCKKL 89
           + +  +  S       +   ST                 +D   K  +L  S + + +  
Sbjct: 3   VSTPLITASDTEGAGEMFRVSTLDLENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETY 62

Query: 90  LAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
             A   KI+ F   +R        H  EF MLE   A    E   +    +++   +   
Sbjct: 63  ACA-LSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFADLEDNARLAEAMLKYVFKAVL 121

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
           ++    +  +   F+E           R+ + D           D        ++ G   
Sbjct: 122 EE----RADDMKFFAERVDKDAIARLERFVSTDFAQV-------DYTDAVAILERCGKTF 170

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
            +   W    S      +          +   YP    A       D +           
Sbjct: 171 ENPVFWGVDLSSEHERYLAEEHFKAPVVVK-NYPKEIKAFYMRLNEDGKTVAAM------ 223

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGF 326
             L     E++   ++  R +       ++       D  +   L        SG  +GF
Sbjct: 224 DVLAPGIGEIIGGSQREERLDVLDARMAEMGL--NKEDYWWYRDLRRYGTVPHSGFGLGF 281

Query: 327 DRLVMLVTGANNINEVIWTPFS 348
           +RL+  VTG  N+ +VI  P +
Sbjct: 282 ERLIAYVTGVQNVRDVIPFPRT 303


>gi|119192776|ref|XP_001246994.1| asparaginyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
          Length = 578

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 103/351 (29%), Gaps = 47/351 (13%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +    Y  R            +  R  +  + R  F E + +E+   ++  +     + +
Sbjct: 254 DPQTLYDNRHLVLRGEIASSVMKVRAAVIRAFRSAFEEQRMLEVTPPAMVQTQVEGGSTL 313

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
            +F       D+  +P YL  S +   +  L +    +FC   ++R  +     H  E+T
Sbjct: 314 FSF-------DYYGEPAYLTQSSQLYLETCLPS-LGDVFCICPSFRAEKSLTRRHLSEYT 365

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      +++ L+     II    ++          +              +      
Sbjct: 366 HIEAELDFITFDDLLDHLEVIICRVLDLVLADPQIAGYIKSLNPDFKPPSRPFKRMKYAE 425

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            ID     + P++                  +  T+ D  +     K+   +  N    L
Sbjct: 426 AIDWLREHNIPNEE----------------GNPHTFGDDIAEAAERKMTDTM--NQTIFL 467

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKK 296
             +P    +      P D R T+  ++    + E+      + D  E            +
Sbjct: 468 THFPVEIKAFYMRKDPEDLRVTESVDVLMPGVGEIVGGSMRMEDWDELMG-----AYASR 522

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +    Y    D            G  +G +R +  + G   + E    P 
Sbjct: 523 GMDPTPYYWYTD--QRKYGTSPHGGYGLGVERFLAWMCGRYTVRECCLYPR 571


>gi|164657151|ref|XP_001729702.1| hypothetical protein MGL_3246 [Malassezia globosa CBS 7966]
 gi|159103595|gb|EDP42488.1| hypothetical protein MGL_3246 [Malassezia globosa CBS 7966]
          Length = 518

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 93/333 (27%), Gaps = 39/333 (11%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLY 77
             L  R  +    R  F  +  +E+    +      G  T        L   D+  +  +
Sbjct: 213 AILRVRAAVLDGFRAEFASSGMLEVTPPCMVQTQVEGGAT--------LFQFDYYGQKSF 264

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  S +   +  L A    ++C   ++R  +     H  E+T LE   A  S++ L+   
Sbjct: 265 LTQSSQLYLETCLPA-LGDVYCVQESFRAEKSHTRRHLSEYTHLEIELAFVSFDDLLSHI 323

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              I    +   +   +   +                                      +
Sbjct: 324 EQDICGMVDRVLKDDKTRALIEQLN----------------PGFQPPKRPFLRLNYKDAI 367

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPAD 255
            YL                D  +     K+   LG+    +L  +P    +      P D
Sbjct: 368 AYLNEHNITNEHGEPHKIGDDIAEAAERKMTDQLGV--PILLHSFPREIKAFYMKRVPGD 425

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
             FT+  +L    +         +   ++      +  +++ I    Y     +      
Sbjct: 426 EAFTESVDLLMPGVGEIVGGSMRMTGHDEL----LDAYKREGIDPSPYY---WYTEQRKY 478

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +  G  +G +RL+  +T    + E    P 
Sbjct: 479 GTCEHGGYGLGVERLLAWLTNRWTVRECSLYPR 511


>gi|325094255|gb|EGC47565.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 581

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 107/351 (30%), Gaps = 47/351 (13%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +    Y  R            +  R     + R+ F E   +E+   S+  +     + +
Sbjct: 257 DPHTLYDNRHLVLRGETSSSVMKVRAATLRAFRKVFEEKGILEVTPPSMVQTQVEGGSTL 316

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
             F       D+  +  YL  S +   +  L +    +FC   ++R  +     H  E+T
Sbjct: 317 FEF-------DYYGEKAYLTQSSQLYLETCLPS-LGDVFCICPSFRAEKSLTRRHLSEYT 368

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      S+  L+    ++I    EVA  +    + V       PE+   +  F R  
Sbjct: 369 HVEAELDFISFTDLLDHLEDMICRVIEVALSEPLIARYVKQLN---PEFTPPSRPFKRMK 425

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             +    L   D  +                +  T+ D  +     K+   +  N    L
Sbjct: 426 YSEAIQWLREHDILNEE-------------GNQHTFGDDIAEAAERKMTDMM--NMPIFL 470

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKK 296
             +P    +      P D R T+  ++    + E+      + D  E          +++
Sbjct: 471 THFPVEIKAFYMRKDPEDTRVTESVDVLMPGVGEIVGGSMRMEDWDELMS-----AYKRE 525

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +    Y    D            G  +G +R +  +     + E    P 
Sbjct: 526 GMDPSPYYWYTD--QRKYGTSPHGGYGIGLERFLAWMCARYTVRECCLYPR 574


>gi|195161004|ref|XP_002021360.1| GL24844 [Drosophila persimilis]
 gi|194118473|gb|EDW40516.1| GL24844 [Drosophila persimilis]
          Length = 507

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 112/354 (31%), Gaps = 54/354 (15%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
             D     R  +++          R+++  + R+++ +  + E+   +L      G  T 
Sbjct: 184 LPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRDHYFDRGYNEVTPPTLVQTQVEGGST- 242

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L       +  +L  S +   +  L A    +F  A ++R  +     H  E+
Sbjct: 243 -------LFKMQFFGEEAFLTQSSQLYLETCLPA-LGDVFTIAQSYRAEQSRTRRHLAEY 294

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      SY+ L+    +++    +   +  +    +  NP  +P            
Sbjct: 295 THVEAECPFISYDDLLDRLEDLVCDVVDRVLKSPYGHLVMELNPDFKPPKKPFRRM---- 350

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCC 235
                          D        ++  +       +   +        K+     IN  
Sbjct: 351 ---------------DYAAAIEWLKKNNVTKDDGTFYEFGEDIPEAPERKMTDT--INEP 393

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQ 293
            +L R+P    S   +  P D R T+  ++   N+ E+      + D  E  + ++    
Sbjct: 394 ILLCRFPVAIKSFYMSRCPEDKRLTESVDVLLPNVGEIVGGSMRIWDSEELLNGYK---- 449

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++ I    Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 450 -REGIDPTPYYWYTD--QRIYGTIPHGGYGLGLERFLCWLLNRYHIREVCLYPR 500


>gi|198431081|ref|XP_002128269.1| PREDICTED: similar to asparaginyl-tRNA synthetase [Ciona
           intestinalis]
          Length = 559

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/337 (16%), Positives = 107/337 (31%), Gaps = 50/337 (14%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+ +  + R+++ E  + E+    L  +   G  T        L   D   +  YL
Sbjct: 256 ILRVRSYLMQAFRDHYFERGYYEVTPPCLVQTQCEGGST--------LFKLDFFGEQAYL 307

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L +    +FC A ++R  +     H  E+T +E   A  ++  L+    
Sbjct: 308 TQSSQLYLETCLPS-LGDVFCLAESYRAEQSRTRRHLAEYTHVEAECAFITFNDLLDRLE 366

Query: 138 NIIRCAAE-----VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++I    +      A + I         P      +  AE                    
Sbjct: 367 DLICDVVDKLLKSPAGELIKDLNPGFVAPKRPFRRMDYAE-------------------- 406

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-APESALANI 251
              ++YL+             + +    +   K+     IN   +L R+P   +S     
Sbjct: 407 --AIVYLKEHDIKKEDGSYYEFGEDIPEMPERKMTDQ--INEPILLCRFPYKIKSFYMQK 462

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              +   T+  +L   N+         +D  E     E     K +  + +      +  
Sbjct: 463 CKDNLELTESVDLLMPNVGEIVGGSMRMDNHE-----ELLEGYKSEGVDPSKYY--WYTD 515

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  +  G  +G +RL+  +T   +I +V   P 
Sbjct: 516 QRKFGTCEHGGYGLGLERLLTWLTDRYHIRDVCLYPR 552


>gi|115400689|ref|XP_001215933.1| asparaginyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114191599|gb|EAU33299.1| asparaginyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 574

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 105/357 (29%), Gaps = 53/357 (14%)

Query: 8   PWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGN 55
              +    Y  R            +  R     + R+ F E++ +E+   ++      G 
Sbjct: 247 HDADPQTLYDNRHLVLRGETASAVMKVRAATLRAFRQTFEEHRMLEVTPPAMVQTQVEGG 306

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQ 114
            T        L   D+  +  YL  S +   +  L +    +FC   ++R  +     H 
Sbjct: 307 ST--------LFKFDYYGENAYLTQSSQLYLETCLPS-MGDVFCVCPSFRAEKSLTRRHL 357

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            E+T +E      ++  L+    ++I    ++      +   +       P++ T +  F
Sbjct: 358 SEYTHIEAELDFITFNDLLDHLESVICRVIDLTLADPATAALLKQLN---PDFKTPSRPF 414

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R    D    L   D P+                    + D  +     K+     IN 
Sbjct: 415 RRMKYSDAIQWLREHDIPNEE-------------GKPHEFGDDIAEAAERKM--TDMINQ 459

Query: 235 CTILDRYPAPESALANIYP-ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              L  +PA   A        D R T+  ++    +         +D  +     E    
Sbjct: 460 PIFLTHFPAEIKAFYMKKDVEDRRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMAA 514

Query: 294 EKKKIYNETYPI---DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            K +  + +      D+             G  +G +R +  +     + E    P 
Sbjct: 515 YKHEGMDPSPYYWYTDQR----KYGTSPHGGYGLGLERFLAWLCARYTVRECSLYPR 567


>gi|289740395|gb|ADD18945.1| asparaginyl-tRNA synthetase [Glossina morsitans morsitans]
          Length = 558

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/353 (13%), Positives = 110/353 (31%), Gaps = 52/353 (14%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           + D     R  +++          R+++  + R ++ +  + E+   +L      G  T 
Sbjct: 235 HPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRGHYFDRGYCEVTPPTLVQTQVEGGST- 293

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L    +  +  YL  S +   +  L A    +FC A ++R  +     H  E+
Sbjct: 294 -------LFKLQYFSEEAYLTQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEY 345

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++++L+    +++    +   +  +       NP  +P            
Sbjct: 346 THIEAECPFITFDELLDRLEDLVCDVVDRVLKSTWGDVVYELNPDFKPPKKPFKRM---- 401

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCC 235
                          +        +   +       +   +        K+     IN  
Sbjct: 402 ---------------NYADAIKWLKDNNVTKDDGTFYEFGEDIPEAPERKMTDT--INEP 444

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            +L R+P    S   ++   D + T+  ++   N+         +   E   R      +
Sbjct: 445 IMLCRFPKDIKSFYMSLCAEDSQLTESVDVLLPNVGEIVGGSMRIYDNEDLLR----GYK 500

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++ I  + Y    D            G  +G +RL+  +    +I EV   P 
Sbjct: 501 REGIDPKPYYWYTDQ-RA-YGTQPHGGYGLGLERLLCWLLNRYHIREVCLYPR 551


>gi|315113222|pdb|2XTI|A Chain A, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed
           With Atp:mg And L-Asp-Beta-Noh Adenylate:ppi:mg
 gi|315113223|pdb|2XTI|B Chain B, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed
           With Atp:mg And L-Asp-Beta-Noh Adenylate:ppi:mg
          Length = 437

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 107/322 (33%), Gaps = 41/322 (12%)

Query: 32  LREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
           +RE+F    ++E+   +L      G  T        L   D+  +  +L  S +   +  
Sbjct: 144 MREHFYNAGYVEVAPPTLVQTQVEGGST--------LFNLDYFGEQSFLTQSSQLYLETC 195

Query: 90  LAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA- 147
           +      +FC A ++R  +     H  E+  +E      + + LM+    ++    +   
Sbjct: 196 IP-TLGDVFCIAQSYRAEKSRTRRHLAEYAHVEAECPFITLDDLMEKIEELVCDTVDRLL 254

Query: 148 -NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
            +++           F  PE       F R    D              + +LQ      
Sbjct: 255 ADEEAKKLLEHINPKFQPPER-----PFLRMEYKD-------------AIKWLQEHNVEN 296

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELY 265
              +  T+ +  +      +     IN   +L+R+P+   +        D   T+  +L 
Sbjct: 297 EFGNTFTYGEDIAEAAERFMTDT--INKPILLNRFPSEIKAFYMQRDAKDNTLTESVDLL 354

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
              +       E++    +  +F++  +  K +  +  P        L       G  +G
Sbjct: 355 MPGV------GEIVGGSMRIWKFDELSKAFKNVEIDPKPYYWYLDQRLYGTCPHGGYGLG 408

Query: 326 FDRLVMLVTGANNINEVIWTPF 347
            +R +  +T  N+I +V   P 
Sbjct: 409 LERFICWLTNTNHIRDVCLYPR 430


>gi|195164590|ref|XP_002023129.1| GL21125 [Drosophila persimilis]
 gi|194105214|gb|EDW27257.1| GL21125 [Drosophila persimilis]
          Length = 557

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 107/351 (30%), Gaps = 50/351 (14%)

Query: 12  RDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHI 59
            D     R  +++          R+++  + R +++   + E+   +L      G  T  
Sbjct: 235 PDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRAHYLARGYNEVTPPTLVQTQVEGGST-- 292

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 L    +  +  YL  S +   +  L A    +F  A ++R  +     H  E+T
Sbjct: 293 ------LFKLQYFSEEAYLTQSSQLYLETCLPA-LGDVFTIAQSYRAEQSRTRRHLAEYT 345

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      +++ L+    +++    +   +                   +      +  
Sbjct: 346 HIEAECPFLTFDDLLDRLEDLVCDVVDRVLK-------------------SPWGNLVKEL 386

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
           N D         + +        ++  +       +          + +    IN   +L
Sbjct: 387 NPDFKPPTKPFRRMNYSDAIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDAINEPIML 446

Query: 239 DRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            R+PA   S   +  P D   T+  + L     E+      + D  E          +++
Sbjct: 447 CRFPAEIKSFYMSRCPEDKTLTESVDVLLPNVGEIVGGSMRIFDSEELLK-----GYQRE 501

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            I  + Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 502 GIDPKPYYWYTD--QRIYGTLPHGGYGLGLERFLCWLLNRYHIREVCLYPR 550


>gi|170115146|ref|XP_001888768.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636244|gb|EDR00541.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 560

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/332 (16%), Positives = 95/332 (28%), Gaps = 32/332 (9%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R  +  + R+       IE+    L      G  T        L   D+  +P +L
Sbjct: 249 VLRLRAALLIAFRDSLTAQSLIEVTPPCLVQTQVEGGAT--------LFKLDYYGQPAFL 300

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L +    +FC   ++R        H  E+T LE   A  ++  LM    
Sbjct: 301 TQSSQLYLETCLPS-LGDVFCVQESFRAENSHTRRHLSEYTHLEAELAFITFTDLMDHIE 359

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            II     +      S   +       P +IT +  F R + +D    L+          
Sbjct: 360 EIICNTVSILLANPTSASLIKSLN---PNFITPSRPFLRLSYVDAIKWLNAHGIKHPKED 416

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
                + G  +A                 +    I     L  +PA   A          
Sbjct: 417 AEGNHEVGDDIAEAAER------------QMTDIIGTPVFLYGFPAELKAFYMKKMP-QG 463

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE--KKKIYNETYPIDEDFLACLTE 315
             +          L     E++    +    E+ +    ++ I  E Y    D       
Sbjct: 464 EGETTVFTESCDLLMPNVGEIVGGSMRIADMEELLAAYKREGIDPEPYYWFTD--QRKYG 521

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +  G  +G +R +  +     + E    P 
Sbjct: 522 TCEHGGYGLGVERFLAWLANRYTVRECSLYPR 553


>gi|307109029|gb|EFN57268.1| hypothetical protein CHLNCDRAFT_21495 [Chlorella variabilis]
          Length = 596

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 80/279 (28%), Gaps = 18/279 (6%)

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESY 129
              +P YL  S +    +  A     I+ F   +R        H  EF M+E   A    
Sbjct: 327 ACARPAYLTVSGQL-NGEYYACALSNIYTFGPTFRAENSHTARHLAEFWMIEPEMAFCDL 385

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              M+   + +R                  +   +        A AR   +   +     
Sbjct: 386 ADDMQCAEDYVRYCCRHLLDSCRPDLEFINSMIDKG-------AIARLEQVANSSFKRVS 438

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                 LL         +     +W           +   +      I+  YP    A  
Sbjct: 439 YTEAIELLEGVVAAGKKKFEFPVSWGIDLQSEHERYLTEEVFRQP-IIVYNYPKDIKAFY 497

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                D +     ++    +       EL+   ++  R +   +   +      P    +
Sbjct: 498 MRLNDDGKTVAAMDVLVPKV------GELVGGSQREERLDVLTRRIAESGMPMEPY-SAY 550

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           L          SG  +GF+RL++  TG +NI EVI  P 
Sbjct: 551 LDLRKYGTVPHSGFGLGFERLILFATGLDNIREVIPFPR 589


>gi|322708418|gb|EFY99995.1| hypothetical protein MAA_04924 [Metarhizium anisopliae ARSEF 23]
          Length = 558

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 97/329 (29%), Gaps = 34/329 (10%)

Query: 45  DSMSLQYS-PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHA 103
               +  S            T    +     P YL  S +    + LA     ++  +  
Sbjct: 231 HPPIITSSDCEGAGEAFTVKTGSKAEFFRD-PKYLTVSTQLHL-EALAQSLGDVWTLSPT 288

Query: 104 WRNGEQGC-LHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
           +R  +     H  EF MLE   +      ++M    ++++  A+       + + V    
Sbjct: 289 FRAEQSDTSRHLSEFYMLEAEMSFVNDMNEVMDLVQSMLKNLAQGLKGLRAANELVQNRL 348

Query: 162 FSEPE--------YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
            S            +   E   R+  +   +        +      + Q    +  H   
Sbjct: 349 DSRDPAERLAFADLVEQEELDRRWTGLLSPSQWPRITYTE---AIERLQPVANQFEHKPI 405

Query: 214 WSDIFSRILIEKIEPNLGINCCT------ILDRYPAPE-SALANIYPADPRFTKRFELYA 266
           W         + +   +G +          + +YP    +       + P   +  E + 
Sbjct: 406 WGSGLQSEHEKYLAKEIGFDKTNNAYLPVFITQYPREIKAFYMLRSASSPPQGETVECF- 464

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED-------FLACLT-EMPQ 318
               L  +  EL     + HR  +     K    E     +D       +L       P 
Sbjct: 465 --DLLVPSLGELAGGSMREHRLSELEDNMKLHGLEVPGKRQDRSSGLGWYLDLRRWGCPP 522

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             G  +GFDRL+  +TG  N+ +V+  P 
Sbjct: 523 HGGFGLGFDRLLSYLTGVANVRDVVPFPR 551


>gi|315113190|pdb|2XGT|A Chain A, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed
           With The Sulphamoyl Analogue Of Asparaginyl-Adenylate
 gi|315113191|pdb|2XGT|B Chain B, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed
           With The Sulphamoyl Analogue Of Asparaginyl-Adenylate
          Length = 435

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 107/322 (33%), Gaps = 41/322 (12%)

Query: 32  LREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
           +RE+F    ++E+   +L      G  T        L   D+  +  +L  S +   +  
Sbjct: 142 MREHFYNAGYVEVAPPTLVQTQVEGGST--------LFNLDYFGEQSFLTQSSQLYLETC 193

Query: 90  LAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA- 147
           +      +FC A ++R  +     H  E+  +E      + + LM+    ++    +   
Sbjct: 194 IP-TLGDVFCIAQSYRAEKSRTRRHLAEYAHVEAECPFITLDDLMEKIEELVCDTVDRLL 252

Query: 148 -NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
            +++           F  PE       F R    D              + +LQ      
Sbjct: 253 ADEEAKKLLEHINPKFQPPER-----PFLRMEYKD-------------AIKWLQEHNVEN 294

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELY 265
              +  T+ +  +      +     IN   +L+R+P+   +        D   T+  +L 
Sbjct: 295 EFGNTFTYGEDIAEAAERFMTDT--INKPILLNRFPSEIKAFYMQRDAQDNTLTESVDLL 352

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
              +       E++    +  +F++  +  K +  +  P        L       G  +G
Sbjct: 353 MPGV------GEIVGGSMRIWKFDELSKAFKNVEIDPKPYYWYLDQRLYGTCPHGGYGLG 406

Query: 326 FDRLVMLVTGANNINEVIWTPF 347
            +R +  +T  N+I +V   P 
Sbjct: 407 LERFICWLTNTNHIRDVCLYPR 428


>gi|225558470|gb|EEH06754.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 581

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 105/351 (29%), Gaps = 47/351 (13%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +    Y  R            +  R     + R+ F E   +E+   S+  +     + +
Sbjct: 257 DPHTLYDNRHLVLRGETSSSVMKVRAATLRAFRKVFEEKGILEVTPPSMVQTQVEGGSTL 316

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
             F       D+  +  YL  S +   +  L +    +FC   ++R  +     H  E+T
Sbjct: 317 FEF-------DYYGEKAYLTQSSQLYLETCLPS-LGDVFCICPSFRAEKSLTRRHLSEYT 368

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      S+  L+    ++I    EV   +    + V       PE+   +  F R  
Sbjct: 369 HVEAELDFISFTDLLDHLEDMICRVIEVVLSEPLIARFVKQLN---PEFTPPSRPFKRMK 425

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             +    L   D  +                +  T+ D  +     K+   +  N    L
Sbjct: 426 YSEAIQWLREHDILNEE-------------GNQHTFGDDIAEAAERKMTDMM--NMPIFL 470

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKK 296
             +P    +      P D   T+  ++    + E+      + D  E          +++
Sbjct: 471 THFPVEIKAFYMRKDPEDTCVTESVDVLMPGVGEIVGGSMRMEDWDELMS-----AYKRE 525

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +    Y    D            G  +G +R +  +     + E    P 
Sbjct: 526 GMDPSPYYWYTD--QRKYGTSPHGGYGIGLERFLAWMCARYTVRECCLYPR 574


>gi|213421565|ref|ZP_03354631.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 138

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 4/139 (2%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1   MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64  TELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           T  +   H     LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEW
Sbjct: 58  TRFVGPGHSQGINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEW 117

Query: 123 YRAHESYEQLMKDCMNIIR 141
           YR H    +LM +  ++++
Sbjct: 118 YRPHYDMYRLMNEVDDLLQ 136


>gi|50552310|ref|XP_503565.1| YALI0E05005p [Yarrowia lipolytica]
 gi|49649434|emb|CAG79146.1| YALI0E05005p [Yarrowia lipolytica]
          Length = 585

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/333 (15%), Positives = 103/333 (30%), Gaps = 39/333 (11%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLY 77
             +  R     S+R  + E    EI    +      G  T        L   D+  +  Y
Sbjct: 280 AVMKVRASFLRSIRRVYDELGMTEITPPCMVQTQVEGGST--------LFALDYYGEKAY 331

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  S +   + ++ +     +C A ++R        H  E+T +E       +E  ++  
Sbjct: 332 LTQSSQLYLETVIPSV-GDAYCIAESFRAERSHTRRHLSEYTHIEAELGFLDFETFLEHI 390

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             ++    +       +   V       P +      F R   +D    L+  + P+   
Sbjct: 391 EEVLCRTVDYVLADPVAGPLVQELN---PGFKAPERPFMRMPYVDALEWLNEHNIPNEE- 446

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPAD 255
                        +  T+ D  +     K+   +G      L R+P    S        D
Sbjct: 447 ------------GNKFTFGDDIAEAAERKMTDEIG--KPIFLTRFPLEIKSFYMKKCVDD 492

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           PR T+  ++   N+         +D ++     E     K++  +   P D  F+     
Sbjct: 493 PRVTESVDVLMPNVGEITGGSMRIDDLD-----ELMAGFKREGIDTA-PYD-FFIDLRKY 545

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 G  +G +R++  +     + E    P 
Sbjct: 546 GTFPHGGYGLGTERILAWLCDRFTVRECSLYPR 578


>gi|90409171|ref|ZP_01217286.1| Lysyl-tRNA synthetase class II [Psychromonas sp. CNPT3]
 gi|90309716|gb|EAS37886.1| Lysyl-tRNA synthetase class II [Psychromonas sp. CNPT3]
          Length = 253

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 17/109 (15%)

Query: 1   MHQIPSQPWWNRDF--HYRRRP-----------FLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + RN I +S+R+Y  +  F+E+++ 
Sbjct: 149 LRPLPDKFHGLTDIESRYRQRYLDLIANDNSRRTFILRNKIVNSIRQYLNDRDFMEVETP 208

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
            LQ  PG  T  + F T     + +  P+YL+ +PE + K+L+  G E+
Sbjct: 209 MLQAIPGGAT-AKPFET---FHNALDLPMYLRIAPELNLKRLVVGGFER 253


>gi|237752831|ref|ZP_04583311.1| aspartyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376320|gb|EEO26411.1| aspartyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 583

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 69/205 (33%), Gaps = 18/205 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            + R +   + R+ +  + R    +  F+E+++  L   +P     ++            
Sbjct: 132 RNPRLQEIFITRSKVTQATRNTLSDLGFLEVETPILTKATPEGARDYLVPSRVHHGEFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +  + + 
Sbjct: 192 LPQ------SPQLFKQLLMVSGFDRYFQIAKCFRDEDLRLDRQPEFTQIDLEMSFCNADD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +++         I +            E  +  E    Y +       D P  
Sbjct: 246 VMGVAEAVLKSIFNACGITIAT----------PFERYSYKEVMESYGSDKPDLRFDLPFV 295

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSD 216
               L    +      +A D   + 
Sbjct: 296 EVGDLFVDSSNDIFASIAKDPKKNR 320



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 5/108 (4%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P    +   +   +   +  +++     E+      +     Q   F+     K+   
Sbjct: 447 HHPFTMPSNLEVEDLEEINSVAYDVVLNGFEIGGGSIRIHKQEIQSRVFDLLGISKE--- 503

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L  L    P   G+A G DR++ML+  A++I +VI  P
Sbjct: 504 -EAQDKFSFLLEALQFGAPPHGGLAFGLDRIIMLLCKAHSIRDVIAFP 550


>gi|330862354|emb|CBX72513.1| hypothetical protein YEW_HJ32730 [Yersinia enterocolitica W22703]
          Length = 102

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 1/101 (0%)

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
            I   D R  +RFE+Y   IEL N   EL D  EQ  RFE++ + ++K     +PID + 
Sbjct: 1   MISTEDHRVAERFEVYFKGIELANGFHELTDGDEQLKRFEQDNRSREKRGLPQHPIDMNL 60

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +  L   +P  SG+A+G DRLVML  GA  +++VI  P  +
Sbjct: 61  IDALKHGLPDCSGVALGVDRLVMLALGAEKLSDVIAFPVGR 101


>gi|323490014|ref|ZP_08095235.1| aspartyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396310|gb|EGA89135.1| aspartyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 590

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 68/208 (32%), Gaps = 17/208 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  S+R +  E  FIE+++  L   +P     ++            
Sbjct: 134 RRPAMYETFKMRSDVTKSIRRFLDEEGFIEVETPILTKSTPEGARDYLVPSRVHDGEFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K +  A  +R+ +     QPEFT ++   + +S E 
Sbjct: 194 LPQ------SPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQPEFTQIDMEMSFQSMED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                    + ++  EA  R+ +            
Sbjct: 248 IIGMNERLMVQMMKDVKNVDIEPT---------FQRMSYTEAMDRFGSDKPDVRFGLELV 298

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
               L+   A +       +     + +
Sbjct: 299 DVSDLVKDSAFKVFTGAIENGGQVKLIN 326



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 9/156 (5%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP--ADPR--F 258
           + G  +   D+    F  I    +      +       +P       ++     DP+   
Sbjct: 412 KFGKELGLIDSSVYKFLWITDWPLLEYDEKDGRYYAAHHPFTMPFEEDLDKLATDPQSVR 471

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            + ++L     EL      +     Q   FE     K+    E        +       P
Sbjct: 472 AQAYDLVLNGYELGGGSARIYRREIQEQMFEVLGFSKE----EANEQFGFLMEAFEYGTP 527

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              GIA G DRLVML+ G  N+ + I  P + S  +
Sbjct: 528 PHGGIAFGLDRLVMLLAGRTNLRDTIAFPKTASASD 563


>gi|33866956|ref|NP_898515.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|46577185|sp|Q7U3K6|SYD_SYNPX RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33639557|emb|CAE08941.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I
           [Synechococcus sp. WH 8102]
          Length = 610

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      R    L  R     + R +  +  FIE+++  L   +P      R +   
Sbjct: 129 RHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDEGFIEVETPVLTRSTPEG---ARDYVLP 185

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
             +     +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   +
Sbjct: 186 SRVCG--GEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQPEFTQLDIEMS 243

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               E++++   ++I    +              +       +T  +A  RY   D   T
Sbjct: 244 FMDQEEILQLNESLICSIWKAVKG---------IDLPRPFPRMTWHDAMERY-GTDRPDT 293

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHD 211
               +  +   +    +  G +V   
Sbjct: 294 RYGMELTN---VSDIVKDMGFKVFSG 316



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 13/156 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+  A  D     F  ++   +              +P       ++     ++ 
Sbjct: 421 LAKELGMVKADQDNDQWNFLWVVDFPMFEFNSEENRYEALHHPFCAPNAEDLSSDASQWA 480

Query: 260 KR--------FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
                     ++L    +EL      + D   QR   +      +    E        + 
Sbjct: 481 DTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLE----EAQEQFGFLMD 536

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DR+VML+ G  +I + I  P
Sbjct: 537 ALDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFP 572


>gi|242003295|ref|XP_002422684.1| asparaginyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212505506|gb|EEB09946.1| asparaginyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 469

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/362 (15%), Positives = 98/362 (27%), Gaps = 63/362 (17%)

Query: 15  HYRR----RP-------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH-I 59
           HYR+    RP           R+       +YF +N FI I +  +  +    G E    
Sbjct: 135 HYRQYIYLRPQLRYFNSLFRLRHSATLGFHQYFDKNGFIGIHTPIITSNDCEGGGEVFSA 194

Query: 60  RAF----------STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             F           +E   Q     P  L  S +   +                 R    
Sbjct: 195 ETFYKNNESPMKEKSETNNQFFFDTPALLTVSGQLHLE--------------AVTRAENS 240

Query: 110 GCL-HQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
               H  EF M+E   A       +++   N I+C       K             +   
Sbjct: 241 RSRLHLSEFYMIEAEEAFVKDINVILERMENCIKCNISSLLDKNLK----EIEYLIKENE 296

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
             V +      N+   +         + ++     +        + ++      L+    
Sbjct: 297 TDVKDQMKMLENVLNKSFTIMTFVEAKEIVNKNRDKISHVSGKCNNFTKEEELFLV---- 352

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                N    +  +P    A       D        L      L     EL     + +R
Sbjct: 353 -KNNNNIPIFVIDWPKENMAFYMKEKND--------LVEKVDLLVPNVGELCGGSLRENR 403

Query: 288 FEKEMQ-EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +E   +  K+    ++    E +L         + G  MGF+R +  +    NI + I  
Sbjct: 404 YETLKKKLKESDILDSM---EWYLNLRKYGNVPTGGFGMGFERFLQFMLNTQNIKDTIPF 460

Query: 346 PF 347
           P 
Sbjct: 461 PR 462


>gi|302681115|ref|XP_003030239.1| hypothetical protein SCHCODRAFT_69166 [Schizophyllum commune H4-8]
 gi|300103930|gb|EFI95336.1| hypothetical protein SCHCODRAFT_69166 [Schizophyllum commune H4-8]
          Length = 569

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 101/344 (29%), Gaps = 42/344 (12%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLY 77
             L  R+ + S++RE F  +  +E+    L      G  T        L   D+  +P +
Sbjct: 245 TTLRLRSALLSAMREVFARHHMLEVTPPCLVQTQVEGGAT--------LFKLDYYNQPAF 296

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  S +   +  L +    ++C   ++R        H  E+T LE   A  ++++LM   
Sbjct: 297 LTQSSQLYLETCLPS-LGDVYCVQESFRAENSNTRRHLSEYTHLEGELAFITFDELMTHL 355

Query: 137 MNIIRCAAEVANQKIFSF------QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
             II    ++      +             P      +   +A      I          
Sbjct: 356 EAIICETVDILLDNPTTAALVKQLNPGFKKPERPFLRMPYVDA------IAWLNEHGILH 409

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
             +         ++G          D  +     ++     I     L  +PA   A   
Sbjct: 410 PEEDAEGNPIKDESGQVKLVPHVVGDDIAEAAERQM--TDIIGKPMFLHSFPAELKAFYM 467

Query: 251 IY----PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI- 305
                      FT+  +L   N+         +  ++    F      K++  +      
Sbjct: 468 KKIPGGDGKHVFTESCDLLMPNVGEIVGGSMRIADLD--ELF---AGYKREGIDAAPYYW 522

Query: 306 --DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             D+          +  G  +G +RL+  +     + E    P 
Sbjct: 523 YTDQR----KYGTCEHGGYGVGIERLLAWLGNRYTVRECSLYPR 562


>gi|148240794|ref|YP_001226181.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|166225438|sp|A5GPL9|SYD_SYNPW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|147849333|emb|CAK24884.1| Aspartyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 611

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      R    L  R     + R +  +  FIE+++  L   +P      R +   
Sbjct: 129 RHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDEGFIEVETPVLTRSTPEG---ARDYVLP 185

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
             +     +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   +
Sbjct: 186 SRVCG--GEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQPEFTQLDIEMS 243

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               E++++   ++I    +              +       +T  +A  RY   D   T
Sbjct: 244 FMDQEEILQLNESLICSIWKAVKG---------IDLPRPFPRMTWHDAMERY-GTDRPDT 293

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHD 211
               +  +   +    +  G +V   
Sbjct: 294 RYGMELTN---VSDIVKDMGFKVFSG 316



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 13/156 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-------SALANIY 252
            A++ G+  A  D     F  ++   +              +P          S  +   
Sbjct: 421 LAKELGMVKADRDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNAEDLGSDASQWA 480

Query: 253 PADPR-FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              P    + ++L    +EL      + D   QR   +      +    E        + 
Sbjct: 481 DTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLE----EAQEQFGFLMD 536

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DR+VML+ G  +I + I  P
Sbjct: 537 ALDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFP 572


>gi|223999631|ref|XP_002289488.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974696|gb|EED93025.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 343

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 56/346 (16%), Positives = 108/346 (31%), Gaps = 25/346 (7%)

Query: 11  NRDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFST 64
              + +R +        R+ +  ++  +         D   +  S      ET   +   
Sbjct: 7   LPFYRFRAQASQSVFRIRSKLDMAVHLFMDREDVQLTDPNIMTVSDCEGAGETFSVSPLM 66

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWY 123
                +     + L  S +   +  +     +++    ++R  +     H  EFT +E+ 
Sbjct: 67  FSKDSEGNDLKVGLTVSSQLPLEASICG-FRQVYTCQKSFRAEKSDTAKHLAEFTHVEYE 125

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A  S + L+      ++     A  K         +  +  +     +           
Sbjct: 126 GAFMSLDTLIDQAERFVKYVIGYAFDKCDEDFEFLESRMAPTDMKPTRDLLRE------- 178

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP- 242
             LD P    +H   +   Q     + DD       +IL++             +  +P 
Sbjct: 179 -CLDRPFVRIKHYDAIALIQKLEFPSFDDDLGSEHEKILVQYFGYMAEFGAFVFVTHWPL 237

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
             +S               F+L    +       EL     +  RF+K  +E K+   + 
Sbjct: 238 KIKSFYMAQVDDGSGECLSFDLLCPRV------GELFGGSMREWRFDKLDEEIKRRGMDV 291

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            PI + FL           G  MGFDRL MLV G  ++ +V+  P 
Sbjct: 292 SPI-QWFLDLRKSGSCPHGGWGMGFDRLCMLVCGVQSVRDVVPFPV 336


>gi|319651675|ref|ZP_08005802.1| aspartyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396742|gb|EFV77453.1| aspartyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 591

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 73/239 (30%), Gaps = 43/239 (17%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R               R+ +  ++R+Y     F+++++  L   +P     ++ 
Sbjct: 124 DVRLKYRYLDLRRPIMFDTFKMRHQVTKAMRDYLDSEGFLDVETPILTKSTPEGARDYLV 183

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 184 PSRVHPGEFYALPQ------SPQIFKQLLMVGGFERYYQIARCFRDEDLRADRQPEFTQV 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S E+++    N+++   +                      +T  EA  R+   
Sbjct: 238 DIEMSFMSQEEIIGLMENMMKKIMKEVKGLDVQ---------LPFPRMTYQEAMDRF-GS 287

Query: 181 DLGTTLDNPDQPDRHLLYLQ---------------AQQAGIRVAHDDTWSDIFSRILIE 224
           D   T    +  D   +  +                +   ++             +   
Sbjct: 288 DKPDTRFGMELTDLSEIVKESSFKVFAGAVASGGQVKAINVKKGAGKYSRKDIDALTEF 346



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 60/191 (31%), Gaps = 14/191 (7%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ-----QAGIRVAHDDTWSDIFSR 220
           +++T  E  A YA + +          D+  +   A      + G  +   D     F  
Sbjct: 371 KFVTEDEQKAFYAALSVEPGDLLLFVADKKNVVADALGALRLKLGKELDLIDQSKFNFLW 430

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR----FTKRFELYACNIELCNACD 276
           +    +              +P    A  ++   D        + ++L     EL     
Sbjct: 431 VTDWPLLEYDEEEGRYYAAHHPFTMPAREDLDLLDKDPAQVRAQAYDLVLNGYELGGGSL 490

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
            + +   Q   F      K+    E        L       P   GIA+G DRLVML+ G
Sbjct: 491 RIFERDVQEKMFSVLGFSKE----EAVEQFGFLLEAFEYGTPPHGGIALGLDRLVMLLAG 546

Query: 336 ANNINEVIWTP 346
             N+ + I  P
Sbjct: 547 RTNLRDTIAFP 557


>gi|315054079|ref|XP_003176414.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311338260|gb|EFQ97462.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 563

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 93/334 (27%), Gaps = 24/334 (7%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +  +   + +     EY +++    I +       G  T   +         + ++  Y
Sbjct: 245 SQAIMAISSGVAQLFSEYMLKSGSRWIFT---SKITGAATEGGSGV---FEISYFKRKAY 298

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  +A     +F     +R  +     H  EF  L++ R  + +   + D 
Sbjct: 299 LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNTHRHLTEFIGLDFERTFQKHYHEVLDF 358

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +        +  F  +                    +   +     L    +    +
Sbjct: 359 AEDLLVFILSELKARFKDEIAVVQKSYPKAGEFKLPKHGKALRLKYMEALGFLKEAGMDV 418

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
              +  +     A +     I                   ++D++P+          P D
Sbjct: 419 SEQERFENDFTTAMEKQLGKIIREKYD---------TDFYVVDKFPSAVRPFYTKSCPDD 469

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P F+  ++ +    E+ +    + D  E             +         ED++     
Sbjct: 470 PTFSNSYDFFMRGEEIMSGAQRINDAKELEE------AMVARGVEPNQEGFEDYINGFRQ 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +G  +G +R+V    G  NI      P  
Sbjct: 524 GCAPHAGGGLGLNRIVQFFLGLPNIRLATLFPRD 557


>gi|297171358|gb|ADI22362.1| lysyl-tRNA synthetase (class II) [uncultured nuHF2 cluster
           bacterium HF0500_02A10]
          Length = 302

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 30/133 (22%)

Query: 1   MHQIP---------------SQPWWNRDFHYRRR-----------PFLLKRNMIQSSLRE 34
           +  +P                    +++  YR+R                R  I + LR 
Sbjct: 149 LRPLPLGKTEIDREKGDATTFSGLTDKEARYRQRYADLAVNPSVREVFRTRAKIIAELRS 208

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
           +  E  F+E+++ +LQ   G     R F T     + + + LYL+ + E   K+L+  G 
Sbjct: 209 FLDELGFLEVETPALQPLYGGAA-ARPFVT---KHNKLDRDLYLRIADELYLKRLIVGGL 264

Query: 95  EKIFCFAHAWRNG 107
           EK++     +RNG
Sbjct: 265 EKVYEIXXDFRNG 277


>gi|208434537|ref|YP_002266203.1| aspartyl-tRNA synthetase [Helicobacter pylori G27]
 gi|238064669|sp|B5Z6Y8|SYD_HELPG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|208432466|gb|ACI27337.1| aspartyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 577

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 96/344 (27%), Gaps = 18/344 (5%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  EN  + +    LQ        T  + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDENDVMGVVEDLLQAIFKAIGHTISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
            +        Y    P+   K  L    +     ++A  +             L    A 
Sbjct: 269 RMPYKEAMENYGSDKPDLRFKLPLIEVGDCFMDSSNAIFSNIAKDPKNKRIKALNVKGAD 328

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANIDLGTT 185
             + + +   +                 +      P  +       +          G  
Sbjct: 329 ALFSRSVLKELEEFVRQFGAKGLAYLQIKEDGIKGPLVKFLSEKGLKNILEKTGAKTGDI 388

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           +      D+ ++     +  ++VA   D    D  + + +                 +P 
Sbjct: 389 V-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPF 447

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                      +      +++    +EL      +     Q+  FEK          E  
Sbjct: 448 TMPKNIECEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQ 503

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 L  L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 504 KKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSIRDVIAFP 547



 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 64/219 (29%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQAIFKAIGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +         P           +      +A D     I
Sbjct: 281 SDKPDLRFKLPLIEVGDCFMDSSNAIFSNIAKDPKNKRI 319


>gi|323349520|gb|EGA83744.1| Krs1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 309

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 17/101 (16%)

Query: 1   MHQIPSQPWWNRD--FHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +H +P+  +  +D    YR+R              + R+ I   +R +  + +FIE+++ 
Sbjct: 213 LHMLPADHFGFKDQETRYRKRYLDLIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETP 272

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKK 88
            +    G  T  + F T     + +   +Y++ +PE   K+
Sbjct: 273 MMNVIAGGAT-AKPFITH---HNDLDMDMYMRIAPELFLKQ 309


>gi|126668401|ref|ZP_01739358.1| aspartyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627110|gb|EAZ97750.1| aspartyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 610

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 72/196 (36%), Gaps = 28/196 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           D   R R            L  R+ + S +R Y   N F+++++  L   +P     ++ 
Sbjct: 121 DVRLRYRFIDLRRPEMLNRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT +
Sbjct: 181 PSRTHEGSFFALPQ------SPQLFKQMLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQV 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E LM    ++IR   +   Q              E   ++ +EA  RY + 
Sbjct: 235 DVEASFVNEEDLMTLNEDMIRALFKDVMQ----------VELPEFPRMSHSEAMDRYGSD 284

Query: 181 DLGTTLDNPDQPDRHL 196
                +    Q    L
Sbjct: 285 KPDLRIPLELQSVDDL 300



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 63/188 (33%), Gaps = 24/188 (12%)

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R    D        D+ +     L A +  I+V HD          +     P      
Sbjct: 384 ERVGGQDGDIVFFGADKTNVVNEALGALR--IKVGHDLNLLTCQWAPMWVVDFPMFEELP 441

Query: 235 CTILD--RYP---APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF- 288
              L    +P      S            ++ +++     EL      + D   Q+  F 
Sbjct: 442 DGGLTAIHHPFTAPSCSPEELAANPATALSRAYDMVLNGTELGGGSIRIHDQQMQQEVFR 501

Query: 289 -----EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
                E+E + K              L  L    P   G+A G DRLVML+TG+++I +V
Sbjct: 502 ILGITEEESRAKFG----------FLLDALKFGCPPHGGLAFGLDRLVMLMTGSSSIRDV 551

Query: 343 IWTPFSQS 350
           I  P +QS
Sbjct: 552 IAFPKTQS 559


>gi|70732092|ref|YP_261848.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|97196806|sp|Q4K7D5|SYD_PSEF5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|68346391|gb|AAY93997.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 591

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ + +S+R Y  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHAGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + +M     +IR   +                F E  ++T  EA  RY   
Sbjct: 236 DIETSFLDEKDIMGLTEGMIRNLFKEVLGL----------EFGEFPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D      + +        +D    I
Sbjct: 285 DKPDLRNPLELVDVADQLKEVEFKVFSGPANDPKCRI 321



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 17/99 (17%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLAC 312
           ++ +++     EL      +     Q+  F      E E +EK              L  
Sbjct: 472 SRAYDMVLNGTELGGGSIRIHRKEMQQAVFRLLGISEAEQEEKFG----------FLLDA 521

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           L    P   G+A G DRLVML+TGA +I EVI  P +QS
Sbjct: 522 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQS 560


>gi|291231216|ref|XP_002735562.1| PREDICTED: asparaginyl-tRNA synthetase-like [Saccoglossus
           kowalevskii]
          Length = 562

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 114/350 (32%), Gaps = 42/350 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
           Q+ ++    R  +  +   L  R+++    R+++  N + EI   +L      G  T   
Sbjct: 243 QLDNRHMMIRGENLSK--ILKIRSVVTQCFRDHYFNNSYFEIFPPTLVQTQVEGGST--- 297

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   ++  +  YL  S +   +  L +    +FC A ++R  +     H  E+T 
Sbjct: 298 -----LFKLNYFGEESYLTQSSQLYLETALPS-MGDVFCIASSYRAEQSRTRRHLSEYTH 351

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E   +   ++ L+    +++    E A            +P  +P              
Sbjct: 352 VEAECSFICFDDLLNRIESLVCDVVERALNSPVGQLIKELHPEFKPPKRPFKRMNY---- 407

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                           ++YL+  +          + +    +   K+     IN    L 
Sbjct: 408 -------------SEAIVYLREHEIKKEDDTYYEFGEDIPEMPERKMTDQ--INEPIFLC 452

Query: 240 RYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKK 297
           R+P    S      P + + T+  +L   N+ E+      + D  E    ++     ++ 
Sbjct: 453 RFPTEIKSFYMFRCPENRKVTESVDLLMPNVGEIVGGSMRIWDNEELLAGYK-----REG 507

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           I    Y    D            G  +G +R +  +    +I +V   P 
Sbjct: 508 IDPTPYYWYTD--QRKYGSCPHGGYGLGLERFLTWLLNRPHIRDVCLYPR 555


>gi|321309599|ref|YP_004191928.1| asparaginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801443|emb|CBY92089.1| asparaginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 443

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 58/342 (16%), Positives = 109/342 (31%), Gaps = 29/342 (8%)

Query: 15  HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
           H R R  L       +N +  S+ E+F  + F  I +  L  +   E     F  +   +
Sbjct: 115 HQRARTRLFRIVNAIKNEVNYSIHEFFYSHGFTWIQAPILTSN-NCEGGSEVFEIK-NSE 172

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHES 128
           +  +K   L  S +F   + +A G + ++ F   +R  +     H  EF M+E   +  +
Sbjct: 173 NSFKKTTLLSVSGQFHA-EAMALGLKDVYTFGPTFRAEKSNTSQHLSEFWMIEPECSFSN 231

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            +  +    + ++                    F   +     +   R  N+        
Sbjct: 232 LDGNINLMEDFLKFVVNRVL-----RNCHEELEFLADKLPNNEDLIPRLENLLSEPFGRI 286

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
             +    +L  + ++      +D  +    +      I           +  YP    A 
Sbjct: 287 SYREAIDMLLQEQKKGVTFENNDIKFGIDLASEHERYITSK--FKKAVFITHYPRAIKAF 344

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE- 307
                 D        L     EL    +   D       FE   + + K      P+D  
Sbjct: 345 YMKDCEDETVLAVDLLVPEVGELMGGSERESD-------FE---KLRIKAEEFGIPLDHL 394

Query: 308 -DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +L         S+G   G++RL+M +TG  NI ++I  P 
Sbjct: 395 NWYLELRKYGYYSSAGFGCGYERLIMYLTGMKNIKDIINYPR 436


>gi|312962762|ref|ZP_07777250.1| Aspartyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311282979|gb|EFQ61572.1| Aspartyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 591

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ + +S+R +  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFLDLRRPEMAEKLRLRSRMTTSIRRFLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHAGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    +++M     +IR   +                F +  ++T  EA  RY   
Sbjct: 236 DIETSFLDEKEIMGLTEQMIRNLFKEVLDL----------EFGDFPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D      +          +D    I
Sbjct: 285 DKPDLRNPLELVDVADQLKEVDFKVFSGPANDPKCRI 321



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 9/98 (9%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TE 315
           ++ +++     EL      +     Q+  F      +    NE    ++    L  L   
Sbjct: 472 SRAYDMVLNGTELGGGSIRIHRKEMQQAVF------RLLGINEAEQEEKFGFLLDALKYG 525

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 526 APPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 563


>gi|254779393|ref|YP_003057498.1| aspartyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001304|emb|CAX29285.1| Aspartate-tRNA ligase (Aspartic acid translase) (Aspartyl-tRNA
           synthetase) [Helicobacter pylori B38]
          Length = 577

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 97/344 (28%), Gaps = 18/344 (5%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  E+  + +    LQ        T  + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDEDDVMSVVEDLLQEIFKAIGHTISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
            +        Y    P+   +  L    +     ++A  +             L    A 
Sbjct: 269 RMPYKEAMENYGSDKPDLRFELPLIEVGDCFMDSSNAIFSNIAKDPKNKRIKALNVKGAD 328

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANIDLGTT 185
             + + +   +    C            +      P  +       +          G  
Sbjct: 329 AIFSRSVLKELEEFVCQFGAKGLAYLQIKEDGIKGPLVKFLSEKGLKNILEKTGAKTGDI 388

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           +      D+ ++     +  ++VA   D    D  + + +                 +P 
Sbjct: 389 V-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPF 447

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                      +      +++    +EL      +     Q+  FEK          E  
Sbjct: 448 TMPKNIECEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQ 503

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 L  L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 504 KKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 66/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +    + +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDEDDVMSVVEDLLQEIFKAIGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNAIFSNIAKDPKNKRI 319


>gi|330811396|ref|YP_004355858.1| Aspartate--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379504|gb|AEA70854.1| Aspartate--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 591

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 80/219 (36%), Gaps = 30/219 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ + +S+R Y  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN- 179
           +   +    + +M     +IR   +                F E  ++T  EA  RY + 
Sbjct: 236 DIETSFLDEKDIMGLTEGMIRNLFKEVLGL----------EFGEFPHMTFEEAMRRYGSD 285

Query: 180 -IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             DL   L+  D  D+         +G         + +
Sbjct: 286 KPDLRNPLELVDVADQLKDVEFKVFSGPANDPKCRIAAL 324



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 9/98 (9%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TE 315
           ++ +++     EL      +     Q+  F      +    NE    ++    L  L   
Sbjct: 472 SRAYDMVLNGTELGGGSIRIHRKEMQQAVF------RLLGINEAEQEEKFGFLLDALKYG 525

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 526 APPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 563


>gi|268679293|ref|YP_003303724.1| aspartyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617324|gb|ACZ11689.1| aspartyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 582

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 79/229 (34%), Gaps = 19/229 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R               R+    ++R       F+E+++  L   +P     ++ 
Sbjct: 121 DVRLKYRYLDLRNAKAYEIFKLRSKATVAVRNSLDAQGFLEVETPILTKSTPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ AG ++ F  A  +R+ +     QPEFT +
Sbjct: 181 PSRVHNGEFYALPQ------SPQLFKQLLMCAGFDRYFQVAKCFRDEDLRADRQPEFTQI 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +   +  + E +MK   N++R   +    +I   F  +      E       +     + 
Sbjct: 235 DIEMSFCNQEDVMKVTENLLRDVFKACGYEISIPFNRIRFKEAMEKYGSDKPDLRYDLSM 294

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           ID+     N        +    ++  I+        +IFS+  ++  E 
Sbjct: 295 IDVIDIFANCKNEIFSNIAKDTKKNRIKALKVPNGDNIFSKRQMQSFEE 343



 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 5/138 (3%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
           D+F  + +   E     N       +P       +  P D   +  +++    +EL    
Sbjct: 422 DVFEFVWVVDFEMFEVENGKVKALHHPFTMPKDIDNTPIDEMESIAYDIVLNGVELGGGS 481

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVT 334
             +     Q+  F    +       E +   E  L  L    P   G+A+G DR++ML+T
Sbjct: 482 IRIHKKEIQQKVF----KLLGIDDEEAHEKFEFLLDALKYGAPPHGGLAIGLDRMMMLIT 537

Query: 335 GANNINEVIWTPFSQSNQ 352
            + +I +VI  P +Q  Q
Sbjct: 538 KSESIRDVIAFPKTQKAQ 555


>gi|318040800|ref|ZP_07972756.1| aspartyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 609

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 65/195 (33%), Gaps = 18/195 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +      R    L  R     + R +  +  FIE+++  L   +P     ++     
Sbjct: 129 RHRYLDLRRERMNSNLRLRAQTIQAARRFLEDQGFIEVETPVLTRSTPEGARDYLVPSRV 188

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                    +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 189 ------CGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQPEFTQLDMEM 242

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    EQ+++   ++I    +                      +T  +A  RY   D   
Sbjct: 243 SFMDQEQILELNESLIASIWKTVKGVELP---------RPFPRLTWHDAMERY-GTDRPD 292

Query: 185 TLDNPDQPDRHLLYL 199
           T    +  +   L  
Sbjct: 293 TRYGMELTNVSDLVA 307



 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 23/161 (14%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-------IY 252
            A++ G+     +  S  F  ++   +              +P       +         
Sbjct: 421 LARELGMVKPDSENDSWNFLWVVDFPMFEFNADENRYEALHHPFCAPNTDDLGNDPSAWA 480

Query: 253 PADPR-FTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPI 305
              P    + ++L    +EL      + D   QR   +      +E  ++     E   +
Sbjct: 481 DTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLEEANQQFGFLMEALDM 540

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                      P   G+A G DR+VML+ G  +I + I  P
Sbjct: 541 ---------GAPPHGGLAFGLDRMVMLLAGEESIRDTIAFP 572


>gi|323307440|gb|EGA60714.1| Msk1p [Saccharomyces cerevisiae FostersO]
          Length = 384

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 74/174 (42%), Gaps = 6/174 (3%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             LL R  I   LR++  +  F+E+++  L          + F T     DH+     L+
Sbjct: 186 QTLLVRARIIKLLRKFLDDRNFVEVETPILSSKSNGAM-AKPFITSSKDFDHLE----LR 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +PE   K+L+ +G +K++     +RN      H  EF+ LE+Y  + S + ++    ++
Sbjct: 241 IAPELWLKRLIISGLQKVYEIGKVFRNEGIDSXHNAEFSTLEFYETYMSMDDIVXRTEDL 300

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
            +       +     +      FSE  ++ ++E   ++  ++   TL+     D
Sbjct: 301 FKFLITNLQKFFQDTRLPVPKTFSEL-HLALSENNWKFRKVEFLPTLNKELGID 353


>gi|288940461|ref|YP_003442701.1| aspartyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288895833|gb|ADC61669.1| aspartyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 592

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ +  ++R +  E  F++I++  L   +P     ++    T       
Sbjct: 133 RRPEMQARLRTRSRVTQAMRRFLDERGFLDIETPILTKSTPEGARDYLVPSRTHPGEFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S ++
Sbjct: 193 LPQ------SPQLFKQLLMMSGLDRYYQIARCFRDEDLRADRQPEFTQLDIEVSFMSEDE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           LM     +IR                          +T AEA  R+   D        + 
Sbjct: 247 LMGLMEGMIRSLFSEVIGVELP---------DPFPRLTYAEAMRRF-GSDRPDLRVPLEL 296

Query: 192 PDRHLLYL 199
            D   L  
Sbjct: 297 IDVADLMD 304



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 8/152 (5%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY---PAPESALANIYPADPRFT 259
           + G      +        +     E +        L      P  E             +
Sbjct: 417 KLGQDRGLLEGEWRPLWVVDFPMFEHDPANGRWVALHHPFTAPKDEHLGLLESDPGACLS 476

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           + +++     EL      +     QR  F+           +        L  L    P 
Sbjct: 477 RAYDMVLNGTELGGGSIRIHRDAVQRQVFKLLNIS----DEQAEERFGFLLKALRFGCPP 532

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             G+A G DRLVML+TGA +I +V+  P +Q+
Sbjct: 533 HGGLAFGLDRLVMLMTGAGSIRDVMAFPKTQT 564


>gi|303326111|ref|ZP_07356554.1| aspartate--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302864027|gb|EFL86958.1| aspartate--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 619

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 68/182 (37%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R +  L  R+ +  ++R Y  E  F+E+++  L   +P      R F     +    
Sbjct: 155 RRPRMQANLRLRHKVAQTIRRYLDEGGFVEVETPVLTKSTPEG---ARDFLVPSRLN--- 208

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E+
Sbjct: 209 PGEFYALPQSPQLFKQMLMVSGLDRYFQIVRCFRDEDLRADRQPEFTQVDIEMSFVDEEK 268

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++    +    K  S              +   EA +RY  +D   T    + 
Sbjct: 269 VMTMAEGLMARVFKDVMGKELS---------LPFPRMRWDEAMSRY-GVDKPDTRFGLEL 318

Query: 192 PD 193
            D
Sbjct: 319 KD 320



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 42/128 (32%), Gaps = 8/128 (6%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +     E    + C       PAP               + +++     E+      +  
Sbjct: 451 LYEYDQEEKRYVACHHPFTS-PAPGHLELMTSDPAKARARAYDMVLNGNEVGGGSIRIHS 509

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
              QR  FE           E       FL   L    P   G+A G DRL+ML+ GA +
Sbjct: 510 GDVQRKMFEAL-----GFTPEQAETQFGFLIQALEQGAPPHGGLAFGLDRLIMLLAGAAS 564

Query: 339 INEVIWTP 346
           I +VI  P
Sbjct: 565 IRDVIAFP 572


>gi|70726292|ref|YP_253206.1| aspartyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|97196912|sp|Q4L6X5|SYD_STAHJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|68447016|dbj|BAE04600.1| aspartyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 588

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 68/196 (34%), Gaps = 22/196 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+    ++REY   N F +I++  L   +P     ++            
Sbjct: 136 RRPELAQTFKMRHQTTRAIREYLDNNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++R   +       S              +T  EA  RY   D   T    + 
Sbjct: 250 VIQMGEEMLRKVVKDVKGIDVS---------GPFPRMTYEEAMRRY-GSDKPDTRFEMEL 299

Query: 192 PDRHLLYLQAQQAGIR 207
            D   L  +      +
Sbjct: 300 KDVSQLGREMDFKVFK 315



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 48/153 (31%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+   +   +  +    L+E  E              P  E         
Sbjct: 410 ALRIKIAKELGLIDENKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDISKLDSEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 QNAQANAYDIVLNGYELGGGSIRIADGELQEKMFEVLGFTKEQ----AREQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|229592304|ref|YP_002874423.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511867|sp|C3JYT1|SYD_PSEFS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229364170|emb|CAY51826.1| aspartyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 591

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 81/219 (36%), Gaps = 30/219 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ + +S+R +  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFLDLRRPEMAEKLRLRSRMTTSIRRFLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHAGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN- 179
           +   +    +++M     +IR   +                F +  ++T  EA  RY + 
Sbjct: 236 DIETSFLDEKEIMGLTEQMIRNLFKEVLDL----------EFGDFPHMTFEEAMRRYGSD 285

Query: 180 -IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             DL   L+  D  D+         +G         + +
Sbjct: 286 KPDLRNPLELVDVADQLKDVDFKVFSGPANDPKCRIAAL 324



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 9/98 (9%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TE 315
           ++ +++     EL      +     Q+  F      +    NE    ++    L  L   
Sbjct: 472 SRAYDMVLNGTELGGGSIRIHRKEMQQAVF------RLLGINEAEQEEKFGFLLDALKYG 525

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 526 APPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 563


>gi|90417107|ref|ZP_01225035.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331123|gb|EAS46379.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 591

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 73/193 (37%), Gaps = 21/193 (10%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQD 70
            RR+     L  R+ I SS+R Y V++ F++I++  +   +P     ++    T      
Sbjct: 132 LRRKEMQNSLRFRSKISSSIRNYLVDDGFLDIETPIMTRATPEGARDYLIPSRTHP---- 187

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
              +   +  SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +    E
Sbjct: 188 --GQFFAMPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIEASFVDEE 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M     +IR          F               +T A+A  +Y +      +    
Sbjct: 246 DIMSTTETMIRGVFSEHMGVDFET----------FPRMTYADAMHKYGSDKPDLRIPLEL 295

Query: 191 QPDRHLLYLQAQQ 203
              + LL     +
Sbjct: 296 VEVKDLLKDIEFK 308



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 29/149 (19%)

Query: 221 ILIEKIEPNLGINCCTILD---------RYP-APESALANIYPADPRFT--KRFELYACN 268
           +      P   I+                +P    S       A+P     + +++    
Sbjct: 422 LYTCVWAPMWVIDFPMFETTDSGALTPLHHPFTAPSCSEEELKANPGAALSRAYDMVLNG 481

Query: 269 IELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
            EL      + D   Q+  FE      +E +EK              L  L    P   G
Sbjct: 482 CELGGGSIRIHDQNMQQTVFEVLGINAEEQREKFG----------FLLDALKHGAPPHGG 531

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +A G DRL+ML+TGA++I +VI  P +QS
Sbjct: 532 LAFGLDRLIMLMTGADSIRDVIAFPKTQS 560


>gi|239827843|ref|YP_002950467.1| aspartyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511862|sp|C5D509|SYD_GEOSW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|239808136|gb|ACS25201.1| aspartyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 594

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 80/228 (35%), Gaps = 37/228 (16%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     L  R+ +  ++R++     F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFRTLQLRHRVTKAIRDFLDGEGFLEVETPILTKSTPEGARDYLVPSRVHPGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 195 LPQ------SPQIFKQLLMVAGFERYYQIARCFRDEDLRADRQPEFTQIDIETSFMSQEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    ++    ++A     S              ++  EA +RY   D   T    + 
Sbjct: 249 IMQLTERMMAYVMKMAKGIDIS---------LPFPRMSYDEAISRY-GSDKPDTRFGLEL 298

Query: 192 PDRHLLYL---------------QAQQAGIRVAHDDTWSDIFSRILIE 224
            D   +                 Q +   ++ A D         +   
Sbjct: 299 VDVSEIVKNSSFKVFAGAIANGGQVKAINVKGAADQYSRKDIDALAEF 346



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 44/138 (31%), Gaps = 17/138 (12%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYP--APESALANIYPADPR--FTKRFELYACNIELCN 273
           F  I    +      +       +P   P          +P     + ++L     EL  
Sbjct: 428 FLWITDWPLLEYDEEDGRYYAAHHPFTMPVREDLPQLETNPEKVRAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDR 328
               + +   Q   F      E + +K+            L       P   GIA+G DR
Sbjct: 488 GSMRIFEREVQEKMFRALGFTEEEARKQFG--------FLLEAFEYGTPPHGGIALGLDR 539

Query: 329 LVMLVTGANNINEVIWTP 346
           LVML+ G  N+ + I  P
Sbjct: 540 LVMLLAGRTNLRDTIAFP 557


>gi|169852011|ref|XP_001832693.1| asparaginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|116506218|gb|EAU89113.1| asparaginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 581

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 55/421 (13%), Positives = 112/421 (26%), Gaps = 87/421 (20%)

Query: 4   IPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNET 57
           + ++   + + H R R       L  R+ +   L E+F    F  +++  L  +      
Sbjct: 164 LSNEYLRD-NVHLRARTSQNAAMLRLRSGLSRRLGEWFENQGFYAVNTPILTANDAEGAG 222

Query: 58  HIRAFSTELIIQDH---------------------------------------------I 72
              +F    +   H                                              
Sbjct: 223 E--SFRIAPLPSGHPAASPSPSTPTSSTPSTSPSTSPSTCPSPSPSHPNSNQNQQLEEFF 280

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQ 131
            +P +L  S +    + +A G  +++  +  +R        H  EF MLE   A    + 
Sbjct: 281 GRPAHLTVSHQLHL-EAIATGLSRVYTLSPCFRAEPSLTGRHLAEFWMLEAEWAFIQQQH 339

Query: 132 L----MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP-------------EYITVAEAF 174
                + +  +++          + +  N+N +  +                   ++   
Sbjct: 340 QNGGGVHEVCDVVEAMLRGTVGPLVNPANLNPDIQTLWKSSASSSGQNAALHDKKLSNLQ 399

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
           + +   +    +   +         ++ +A            + S      ++  +G   
Sbjct: 400 SAFGTNEWWPRMSYTEAITHLETAPRSTKAKWEFEPKWGR-PLQSEHERWLVDELVGGGR 458

Query: 235 CTILDRYPAPESALANIY--------PADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
              +  YP                           F+L    +          +  E   
Sbjct: 459 PVFVTDYPVGVKPFYMRENELREGEGDEGRGTVACFDLLVPGVGELVGGSVREERPEILS 518

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           R  +E           Y   ED +      P  +G  MGF+RLV  V G  NI E I  P
Sbjct: 519 RKMREAGLADGG---AYKWYED-IRKYGGAP-HAGFGMGFERLVSWVGGVENIRECIPFP 573

Query: 347 F 347
            
Sbjct: 574 R 574


>gi|242310434|ref|ZP_04809589.1| aspartyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522832|gb|EEQ62698.1| aspartyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 583

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 70/200 (35%), Gaps = 18/200 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            + R +   + R+ +  ++R       F+EI++  L   +P     ++            
Sbjct: 132 RNPRLQEIFITRSKVAQAVRNTLSNLGFLEIETPILTKATPEGARDYLVPSRVHHGEFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 192 LPQ------SPQLFKQLLMVSGFDKYFQIAKCFRDEDLRLDRQPEFTQIDIEMSFVEQKD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    ++++        ++ +             + T  E    Y +       D P  
Sbjct: 246 VMGVAESVLKSIFGACGIEVQT----------PFPHYTYKEVMETYGSDKPDLRYDLPLV 295

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
               L    + +    +A D
Sbjct: 296 EVSDLFVDSSNEIFASIAKD 315



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 13/112 (11%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEK 295
            +P        +   +   +  +++     E+      +     Q   FE     + + K
Sbjct: 447 HHPFTMPRDLEVEDIEEINSVAYDVVLNGFEIGGGSIRIHKQEIQSKVFELLGITQEEAK 506

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            K            L  L    P   GIA G DR++ML+  A++I +VI  P
Sbjct: 507 DKF--------SFLLEALQFGAPPHGGIAFGLDRIIMLLCNAHSIRDVIAFP 550


>gi|332758054|gb|EGJ88380.1| aspartyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332766842|gb|EGJ97043.1| aspartyl-tRNA synthetase [Shigella flexneri 2930-71]
          Length = 504

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 23  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 82

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 83  TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 136

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 137 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 186

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 187 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 232



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            LL    +  G+          +    + E      G+         P   +A       
Sbjct: 322 ALLLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 380

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 381 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 430

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 431 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 469


>gi|120554627|ref|YP_958978.1| aspartyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166225355|sp|A1U1C2|SYD_MARAV RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120324476|gb|ABM18791.1| aspartyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 599

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           D   R R            L  R+ + S +R +     F+++++  L   +P     ++ 
Sbjct: 121 DVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNFLDSRGFMDVETPILTRATPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT +
Sbjct: 181 PSRTHEGSFFALPQ------SPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQV 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    E LM     +IR   +                  E   +  +EA  RY   
Sbjct: 235 DIEASFIDEETLMGLNEEMIRSLFKDVLD----------VELPEFPRMPYSEAMQRY-GS 283

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D        +  D   L              D    +
Sbjct: 284 DKPDLRIPLELQDVGDLVESVDFKVFAGPAKDPKGRV 320



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 57/181 (31%), Gaps = 8/181 (4%)

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R    D        D+       L A +  +    +    +     +++        +
Sbjct: 383 MERVGAEDGDIVFFGADKATVVNEALGALRIKVGHDLNMLTCEWAPMWVVDFPMFEELPD 442

Query: 234 CCTILDRYP---APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +P      S            ++ +++     EL      + D   Q   F  
Sbjct: 443 GNLTAIHHPFTAPSCSPEDLAADPANALSRAYDMVLNGTELGGGSIRIHDEKMQEAVF-- 500

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +       E        L  L    P   G+A G DRLVML+TG+++I +VI  P +Q
Sbjct: 501 --RILGIGEEEARAKFGFLLDALKFGCPPHGGLAFGLDRLVMLMTGSSSIRDVIAFPKTQ 558

Query: 350 S 350
           S
Sbjct: 559 S 559


>gi|88809467|ref|ZP_01124975.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I
           [Synechococcus sp. WH 7805]
 gi|88786686|gb|EAR17845.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I
           [Synechococcus sp. WH 7805]
          Length = 611

 Score =  115 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 69/206 (33%), Gaps = 19/206 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      R    L  R     + R +     FIE+++  L   +P      R +   
Sbjct: 129 RHRYLDLRRKRMNDNLRLRAQTIQAARRFLENEGFIEVETPVLTRSTPEG---ARDYVLP 185

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
             +     +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   +
Sbjct: 186 SRVCG--GEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQPEFTQLDIEMS 243

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               EQ+++   ++I    +                      +T  +A  RY   D   T
Sbjct: 244 FMDQEQILQLNESLICSIWKAVKGVELP---------RPFPRMTWHDAMERY-GTDRPDT 293

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHD 211
               +  +   +    +  G +V   
Sbjct: 294 RYGMELTN---VSDIVKDMGFKVFSG 316



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 13/156 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF- 258
            A++ G+     D     F  ++   +              +P       ++   +  + 
Sbjct: 421 LAKELGMVKPDRDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNQEDLGSNETEWE 480

Query: 259 -------TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
                   + ++L    +EL      + D   QR   +      +    E        + 
Sbjct: 481 TTLPTARAQAYDLVLNGLELGGGSLRIHDSSLQRQVLQTVGLPLE----EAQEQFGFLMD 536

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DR+VML+ G  +I + I  P
Sbjct: 537 ALDVGAPPHGGLAFGIDRMVMLLAGEESIRDTIAFP 572


>gi|289550605|ref|YP_003471509.1| Aspartyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180137|gb|ADC87382.1| Aspartyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 588

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 22/196 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RR         R+ I  S+R Y   N F +I++  L   +P     ++            
Sbjct: 136 RRTELAQTFKMRHQITQSIRHYLDNNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R   +                      +T  EA +RY   D   T  + + 
Sbjct: 250 VMAMGEEMLRKVVKEVKGIDVE---------GPFPRMTYNEAMSRY-GSDKPDTRFDMEL 299

Query: 192 PDRHLLYLQAQQAGIR 207
            D   L  +      +
Sbjct: 300 IDVSKLGTEMDFKVFK 315



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 48/153 (31%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRIKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEEDIKKLDSEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      +   + Q   FE     K++            L    
Sbjct: 470 ENAQANAYDIVLNGYELGGGSIRIHHGVLQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|332757665|gb|EGJ87998.1| aspartyl-tRNA synthetase [Shigella flexneri 2747-71]
          Length = 497

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 16  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 75

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 76  TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 129

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 130 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 179

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 180 AEAERRY-GSDKPDLRNPMELADVADLLKSVEFAVFAGPANDPKGRV 225



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            LL    +  G+          +    + E      G+         P   +A       
Sbjct: 315 ALLLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 373

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 374 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 423

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 424 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 462


>gi|326474809|gb|EGD98818.1| aspartyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326477798|gb|EGE01808.1| aspartyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 563

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 93/334 (27%), Gaps = 24/334 (7%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +  +   + +     EY +++    I +       G  T   +         + ++  Y
Sbjct: 245 SQAIMAISSGVAQLFSEYMLKSGSRWIFT---SKITGAATEGGSGV---FEISYFKRKAY 298

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  +A     +F     +R  +     H  EF  L++ +  + +   + D 
Sbjct: 299 LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNTHRHLTEFIGLDFEKTFQKHYHEVLDF 358

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +        +  F  +                    +   +     L    +    +
Sbjct: 359 AENLLVFILSELKIRFKDEIAVVQKSYPKAGEFKLPKDGKALRLKYMEALGFLKEAGVDV 418

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
              +  +     A +     I                   ++D++P+          P D
Sbjct: 419 SEQERFENDFTTAMEKQLGRIIREKYD---------TDFYVVDKFPSAVRPFYTKSCPDD 469

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P F+  ++ +    E+ +    + D  E             +         ED++     
Sbjct: 470 PTFSNSYDFFMRGEEIMSGAQRINDAKELEE------AMVARGVEPNQEGFEDYINGFRQ 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +G  +G +R+V    G  NI      P  
Sbjct: 524 GCAPHAGGGLGLNRIVQFFLGLPNIRLATLFPRD 557


>gi|333004741|gb|EGK24263.1| aspartyl-tRNA synthetase [Shigella flexneri K-218]
          Length = 497

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 16  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 75

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 76  TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 129

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 130 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 179

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 180 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 225



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            LL    +  G+          +    + E      G+         P   +A       
Sbjct: 315 ALLLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 373

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 374 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 423

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 424 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 462


>gi|323165010|gb|EFZ50800.1| aspartyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 504

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 23  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 82

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 83  TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 136

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 137 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 186

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 187 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 232



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 322 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 380

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 381 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 430

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 431 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 469


>gi|254432783|ref|ZP_05046486.1| aspartyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197627236|gb|EDY39795.1| aspartyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 606

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 63/187 (33%), Gaps = 18/187 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +      R    LL R     + R +  +  FIE+++  L   +P     ++     
Sbjct: 129 RHRYLDLRRERMNGNLLLRARTIQAARRFLEDQGFIEVETPVLTRSTPEGARDYLVPSRV 188

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                    +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 189 ------CGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQPEFTQLDMEM 242

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    EQ+++    +I    +                      +T  EA  RY   D   
Sbjct: 243 SFMDQEQILELNEALIAHIWKAVKGVELP---------RPFPRLTWQEAMERY-GTDRPD 292

Query: 185 TLDNPDQ 191
           T    + 
Sbjct: 293 TRYGMEL 299



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 49/166 (29%), Gaps = 33/166 (19%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-- 257
            A++ G+           F  ++   +              +P          P D    
Sbjct: 421 LARELGMVQPDSANDRWNFLWVVDFPMFEFNAEENRLEALHHP-----FCAPNPGDLGAD 475

Query: 258 -----------FTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYN 300
                        + ++L    +EL      + D   QR   +      +E + +     
Sbjct: 476 PAAWADTLPTARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTIGLPLEEAEAQFGFLM 535

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +           P   G+A G DR+VML+ G  +I + I  P
Sbjct: 536 EALDM---------GAPPHGGLAFGVDRIVMLLAGEESIRDTIAFP 572


>gi|30063276|ref|NP_837447.1| aspartyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|30041528|gb|AAP17256.1| aspartate tRNA synthetase [Shigella flexneri 2a str. 2457T]
          Length = 590

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            LL    +  G+          +    ++       G+         P   +A       
Sbjct: 408 ALLLKVGKDLGLTDESKWAPLWVIDFPMLGDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|323972626|gb|EGB67829.1| aspartyl-tRNA synthetase [Escherichia coli TA007]
          Length = 504

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 23  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 82

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 83  TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 136

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 137 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 186

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 187 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 232



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 322 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 380

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 381 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 430

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 431 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 469


>gi|315658100|ref|ZP_07910972.1| aspartate--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496429|gb|EFU84752.1| aspartate--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 588

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 22/196 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RR         R+ I  S+R Y   N F +I++  L   +P     ++            
Sbjct: 136 RRTELAQTFKMRHQITQSIRHYLDNNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R   +                      +T  EA +RY   D   T  + + 
Sbjct: 250 VMAMGEEMLRKVVKDVKGIDVE---------GPFPRMTYNEAMSRY-GSDKPDTRFDMEL 299

Query: 192 PDRHLLYLQAQQAGIR 207
            D   L  +      +
Sbjct: 300 IDVSKLGTEMDFKVFK 315



 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRIKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEEDIKKLDSEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      +     Q   FE     K++            L    
Sbjct: 470 ENAQANAYDIVLNGYELGGGSIRIHHGDLQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|152970927|ref|YP_001336036.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238895442|ref|YP_002920177.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|262041982|ref|ZP_06015164.1| aspartate-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330001138|ref|ZP_08303905.1| aspartate--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|166225351|sp|A6TB35|SYD_KLEP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150955776|gb|ABR77806.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238547759|dbj|BAH64110.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259040680|gb|EEW41769.1| aspartate-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328537784|gb|EGF63983.1| aspartate--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 595

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      E   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREIMEAMVRQLWLEVKGVDLG----------EFPIMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 96.6 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 48/151 (31%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S     K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTADELKAAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      +     Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHRGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|320194418|gb|EFW69049.1| aspartyl-tRNA synthetase [Escherichia coli WV_060327]
          Length = 577

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 96  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 155

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 156 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 209

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R            +             +T 
Sbjct: 210 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGY----------FPVMTF 259

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 260 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 305



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 21/188 (11%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +       L     +  G+          +    + E 
Sbjct: 369 ERTGAQDGDMIFFGADNKKIVAD---AMGALRLKVGKDLGLTDESKWAPLWVIDFPMFED 425

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
                G+         P   +A       +      +++     E+      + +   Q+
Sbjct: 426 DGE-GGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQ 484

Query: 286 HRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
             F      E+E +EK              L  L    P  +G+A G DRL ML+TG +N
Sbjct: 485 TVFGILGINEEEQREKFG----------FLLDALKYGTPPHAGLAFGLDRLTMLLTGTDN 534

Query: 339 INEVIWTP 346
           I +VI  P
Sbjct: 535 IRDVIAFP 542


>gi|157145355|ref|YP_001452674.1| aspartyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166225337|sp|A8AFH5|SYD_CITK8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157082560|gb|ABV12238.1| hypothetical protein CKO_01095 [Citrobacter koseri ATCC BAA-895]
          Length = 590

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 76/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R   +                  +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWQEVKGVDLG----------DFPIMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 48/150 (32%), Gaps = 26/150 (17%)

Query: 215 SDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTKR 261
               +     K  P   I+     D               P   +A       +      
Sbjct: 414 GKDLNLTDEAKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDLTAAELKAAPENAVANA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEM 316
           +++     E+      +     Q+  F      E ++++K            L  L    
Sbjct: 474 YDMVINGYEVGGGSVRIHSGDMQQTVFGILGINEQEQREKFG--------FLLDALKYGT 525

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 526 PPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|209363787|ref|YP_001423843.2| aspartyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|207081720|gb|ABS76474.2| aspartyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 610

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 69/211 (32%), Gaps = 22/211 (10%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTEL 66
               +   R    L  R+ I   +R +  E  F++I++  L   +P     ++    T  
Sbjct: 151 LRRPEVAQR----LKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVPSRTHP 206

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                  +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT L+   + 
Sbjct: 207 ------GQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQPEFTQLDLEMSF 260

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              + + +    +IR               +N         IT  EA   Y   D     
Sbjct: 261 VEEKDIQQLMETMIRHLFST---------FLNVPLPDPFPRITYDEAIKTY-GTDRPDLR 310

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +     D   L    +    +   ++    I
Sbjct: 311 NPLTLVDVTDLMKSVEFKVFKEPANNPHGRI 341



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
           A + +              +   E                       I       ++ ++
Sbjct: 438 ADLNLYEGQWKPVWVVDFPMFDREDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 497

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           +     E+      + D   Q    +     K+    E        L  L    P   GI
Sbjct: 498 IVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMA--EAQF--GHLLMALQFGSPPLGGI 553

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           A G DRLV ++TGA++I +VI  P +Q+ Q
Sbjct: 554 AFGLDRLVAIMTGASSIRDVIAFPKTQTAQ 583


>gi|315054251|ref|XP_003176500.1| asparaginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311338346|gb|EFQ97548.1| asparaginyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 550

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 115/392 (29%), Gaps = 55/392 (14%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS 52
           + Q+P         H R R          R+     + E F  +    F+++    +  S
Sbjct: 162 LRQLP---------HLRLRTPFNALLSRLRSEFIYQVTEEFRSHYHLNFVQVQPPLITSS 212

Query: 53  ---PGNET---HIRAFSTELI-IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                 E    + R   TE   + +  R P YL  S +   +   AA    ++  +  +R
Sbjct: 213 DCEGAGEVFTINPRDVVTEEGKVTEFFRSPKYLTVSSQLHLEAY-AAELGNVWTLSPTFR 271

Query: 106 NGEQG-CLHQPEFTMLEWYRAHESY-EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
             +     H  EF MLE   ++    E L      ++R   +   +   + +  +     
Sbjct: 272 AEKSDTPRHLSEFYMLEVEMSYIDSLEPLTAFVETLLRNITQRVYKSPVAQELFSLKETD 331

Query: 164 EP-EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG-IRVAHDDTWSDIFSRI 221
           +  +  +  +   R+  +  G +              +A   G  +     +WS      
Sbjct: 332 DLTKDTSNVDLEKRWMALIEGPSWPRITFSHAIKRLHEAVSTGQAKFDFPPSWSGGLQLE 391

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALAN------IYPADPRFTKRFELYACNIELCNAC 275
             + +   +G      +  YP P                         L     E+    
Sbjct: 392 HEKFLVDTIGKGLPVFVTDYPKPVKPFYMSPSSGSPNENGETVACFDLLLPEICEVVGGS 451

Query: 276 DELL--DPIEQRHRFEKEMQEKKKIYNETYPIDE-----DFLACLT-------------E 315
                  P+ Q  R    ++ K      + P+D        LA                 
Sbjct: 452 LREHRLSPLIQNMREHGLLRLKDSTPQPSSPVDAKAPYPHLLANEELGSIQWYADLRRWG 511

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +GFDR V  + G +++ +++  P 
Sbjct: 512 TVPHGGFGLGFDRFVGYLAGVSSLRDLVPFPR 543


>gi|169769410|ref|XP_001819175.1| asparaginyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|83767033|dbj|BAE57173.1| unnamed protein product [Aspergillus oryzae]
          Length = 571

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/354 (14%), Positives = 106/354 (29%), Gaps = 53/354 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +    Y  R            +  R     + R+ F EN+ +E+   ++      G  T 
Sbjct: 247 DPQTLYDNRHLVLRGETASAVMKVRAATLRAFRKVFEENRMLEVTPPAMVQTQVEGGST- 305

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   D+  +  YL  S +   +  L +    +FC   ++R  +     H  E+
Sbjct: 306 -------LFKFDYYGENAYLTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEY 357

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++  L+     +I    E+   +  +   +N      P++   +  F R 
Sbjct: 358 THIEAELDFITFTDLLDHLEAVICRVIELILAEPETAAFINQLN---PDFKPPSRPFRRM 414

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
              D    L   + P+                    + D  +     K+     IN    
Sbjct: 415 KYSDAIQWLIEHEIPNEE-------------GKPHQFGDDIAEAAERKM--TDIINQPIF 459

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           L  +PA   +      P D R T+  ++    +         +D  +     E     K 
Sbjct: 460 LTHFPAEIKAFYMKKDPEDRRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMGAYKH 514

Query: 297 KIYNETYPI---DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  + +      D+             G  +G +R +  +     + E    P 
Sbjct: 515 EGMDPSPYYWYTDQR----KYGTSPHGGYGLGLERFLAWLCARYTVRECSLYPR 564


>gi|307637304|gb|ADN79754.1| Aspartyl-tRNA synthetase/Aspartyl-tRNA(Asn) synthetase
           [Helicobacter pylori 908]
          Length = 577

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 100/344 (29%), Gaps = 18/344 (5%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  EN  + +    LQ        T  + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDENDVMGVVEDLLQAIFKAIGHTISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
            +        Y    P+   +  L    +     ++A  +             L    A 
Sbjct: 269 RMPYKEAMENYGSDKPDLRFELPLIEVGDCFMDSSNAIFSNIAKDPKNKRIKALNVKGAD 328

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANIDLGTT 185
             + + +   +                 +      P  +       ++     ++ +G  
Sbjct: 329 ALFSRSVLKELEEFVRQFGAKGLAYLQIKENEVKGPLVKFLSEKGLKSILEKTDVQVGDI 388

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           +      D+ ++     +  ++VA   D    D  + + +                 +P 
Sbjct: 389 V-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPF 447

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                      +      +++    +EL      +     Q+  FEK          E  
Sbjct: 448 TMPKNIECEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQ 503

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 L  L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 504 KKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 65/219 (29%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQAIFKAIGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNAIFSNIAKDPKNKRI 319


>gi|310657332|ref|YP_003935053.1| aspartyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308824110|emb|CBH20148.1| aspartyl-tRNA synthetase [Clostridium sticklandii]
          Length = 700

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 110/357 (30%), Gaps = 33/357 (9%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEI--DSMSLQYSPGNETHIRAFSTEL 66
           + + D    R+P       +   L  +  +   IE+      L    G++   R F T  
Sbjct: 228 FRDEDLRADRQPEF---TQLDMEL-SFVDQEDVIELLEH---LFSKIGSDVLKREFKTPF 280

Query: 67  IIQDHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
               +     LY    P+      +    +     +    +         +   ++   +
Sbjct: 281 RRLTYDEAMSLYGSDKPDTRFGFEMVDLTDIAKTCSFEVFSKIANSTGIVKAINVKGGDS 340

Query: 126 HESYEQLMKDCMNII---RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
               +        +    +  A +A  +    ++V    F + E  ++ +        DL
Sbjct: 341 FTRTQIEELTEKAVSYGGKGMAWIAIGQDKELKSVLTKFFKKEEMDSILDKMQAEPG-DL 399

Query: 183 GTTLDNPDQPDRHLL----YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
                + +     +L       A   G+R   D  +  +    L+E  E           
Sbjct: 400 IIFCADKESAVYKILGGLRLDAADMLGLRKKDDFEFLVVTDFPLLEWSEEEKRYVAMHHP 459

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEM 292
              P  E              K +++    +EL +    + +   Q   F      E+E 
Sbjct: 460 FTMPKDEDFALMESDPGLVRAKSYDIVLNGVELGSGSIRIHEQELQAKMFSLLGFSEEEA 519

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +E+     E +             P   G A G DRLVML+TG+++I EVI  P  +
Sbjct: 520 KERFGFMLEAFE---------YGTPPHGGFAFGIDRLVMLLTGSSSIREVIAFPKMR 567



 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 78/226 (34%), Gaps = 25/226 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                   L  R  + S++R Y +E  F+E+++  L   +P      R F     +    
Sbjct: 142 RRPAMLENLKMRQQVISTVRNYLIEQDFLEVETPILTKSTPEG---ARDFLVPSRMD--- 195

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+  G +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 KGTFYALPQSPQIYKQLLMVGGVDKYFQVAKCFRDEDLRADRQPEFTQLDMELSFVDQED 255

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLG 183
           ++     ++          +   +            +T  EA + Y           ++ 
Sbjct: 256 VI----ELLEHLFSKIGSDVLKREFKT-----PFRRLTYDEAMSLYGSDKPDTRFGFEMV 306

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
              D        +    A   GI  A +    D F+R  IE++   
Sbjct: 307 DLTDIAKTCSFEVFSKIANSTGIVKAINVKGGDSFTRTQIEELTEK 352


>gi|212219277|ref|YP_002306064.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|212013539|gb|ACJ20919.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 610

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 69/211 (32%), Gaps = 22/211 (10%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTEL 66
               +   R    L  R+ I   +R +  E  F++I++  L   +P     ++    T  
Sbjct: 151 LRRPEVAQR----LKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVPSRTHP 206

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                  +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT L+   + 
Sbjct: 207 ------GQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQPEFTQLDLEMSF 260

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              + + +    +IR               +N         IT  EA   Y   D     
Sbjct: 261 VEEKDIQQLMETMIRHLFST---------FLNVPLPDPFPRITYDEAIKTY-GTDRPDLR 310

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +     D   L    +    +   ++    I
Sbjct: 311 NPLTLVDVTDLMKSVEFKVFKEPANNPHGRI 341



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
           A + +              +   E                       I       ++ ++
Sbjct: 438 ADLNLYEGQWKPVWVVDFPMFDREDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 497

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           +     E+      + D   Q    +     K+    E        L  L    P   GI
Sbjct: 498 MVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMA--EAQF--GHLLMALQFGSPPLGGI 553

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           A G DRLV ++TGA++I +VI  P +Q+ Q
Sbjct: 554 AFGLDRLVAIMTGASSIRDVISFPKTQTAQ 583


>gi|260436142|ref|ZP_05790112.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260414016|gb|EEX07312.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 609

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      R    L  R     + R +  +  FIE+++  L   +P      R +   
Sbjct: 129 RHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDAGFIEVETPVLTRSTPEG---ARDYVLP 185

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
             +     +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   +
Sbjct: 186 SRVCG--GEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQPEFTQLDIEMS 243

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               EQ+++   ++I    +                      +T  +A  RY   D   T
Sbjct: 244 FMDQEQILELNESLICAIWKAVKG---------IELPRPFPRMTWHDAMERY-GTDRPDT 293

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHD 211
               +  +   +    +  G +V   
Sbjct: 294 RYGMELTN---VSDIVKDMGFKVFSG 316



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 13/156 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-------SALANIY 252
            A++ G+  A  D     F  ++   +              +P          S  +   
Sbjct: 421 LAKELGMVKADRDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNAEDLGSDASKWA 480

Query: 253 PADPR-FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              P    + ++L    +EL      + D   QR   +      +    E        + 
Sbjct: 481 DILPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLE----EAQEQFGFLMD 536

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DR+VML+ G  +I + I  P
Sbjct: 537 ALDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFP 572


>gi|325995895|gb|ADZ51300.1| Aspartyl-tRNA synthetase [Helicobacter pylori 2018]
          Length = 577

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 100/344 (29%), Gaps = 18/344 (5%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  EN  + +    LQ        T  + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDENDVMGVVEDLLQAIFKAIGHTISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
            +        Y    P+   +  L    +     ++A  +             L    A 
Sbjct: 269 RMPYKEAMENYGSDKPDLRFELPLIEVGDCFMDSSNAIFSNIAKDPKNKRIKALNVKGAD 328

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANIDLGTT 185
             + + +   +                 +      P  +       ++     ++ +G  
Sbjct: 329 ALFSRSVLKELEEFVRQFGAKGLAYLQIKENEVKGPLVKFLSEKGLKSILEKTDVQVGDI 388

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           +      D+ ++     +  ++VA   D    D  + + +                 +P 
Sbjct: 389 V-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPF 447

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                      +      +++    +EL      +     Q+  FEK          E  
Sbjct: 448 TMPKNIECEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQ 503

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 L  L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 504 KKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 65/219 (29%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQAIFKAIGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNAIFSNIAKDPKNKRI 319


>gi|212212083|ref|YP_002303019.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|215919207|ref|NP_820548.2| aspartyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|206584091|gb|AAO91062.2| aspartyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|212010493|gb|ACJ17874.1| aspartyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 610

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 69/211 (32%), Gaps = 22/211 (10%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTEL 66
               +   R    L  R+ I   +R +  E  F++I++  L   +P     ++    T  
Sbjct: 151 LRRPEVAQR----LKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVPSRTHP 206

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                  +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT L+   + 
Sbjct: 207 ------GQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQPEFTQLDLEMSF 260

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              + + +    +IR               +N         IT  EA   Y   D     
Sbjct: 261 VEEKDIQQLMETMIRHLFST---------FLNVPLPDPFPRITYDEAIKTY-GTDRPDLR 310

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +     D   L    +    +   ++    I
Sbjct: 311 NPLTLVDVTDLMKSVEFKVFKEPANNPHGRI 341



 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
           A + +              +   E                       I       ++ ++
Sbjct: 438 ADLNLYEGQWKPVWVVDFPMFDREDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 497

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           +     E+      + D   Q    +     K+    E        L  L    P   GI
Sbjct: 498 MVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMA--EAQF--GHLLMALQFGSPPLGGI 553

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           A G DRLV ++TGA++I +VI  P +Q+ Q
Sbjct: 554 AFGLDRLVAIMTGASSIRDVIAFPKTQTAQ 583


>gi|86608637|ref|YP_477399.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|97196961|sp|Q2JMA8|SYD_SYNJB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|86557179|gb|ABD02136.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 601

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 71/208 (34%), Gaps = 18/208 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +  ++R +   E  F+E+++  L   +P     ++           
Sbjct: 144 RRERMSRNLQLRHRVIQAIRRFLEDEEGFVEVETPILTRSTPEGARDYLVPSRVNP---- 199

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
              +   L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   +    E
Sbjct: 200 --GEWFALPQSPQLFKQLLMVAGVDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMDQE 257

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +++    +I    +              +       +T AEA ARY +    T      
Sbjct: 258 GILELNERLICHIFKTVKG---------IHLPRPFPRLTYAEAMARYGSDKPDTRFGMEL 308

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
                +      +   +V  +     I 
Sbjct: 309 VDVSEVFQGSRFKVFAKVLAEGGLIKIL 336



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 15/113 (13%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQ 293
            +P       ++        + ++L    +E+      +     Q   F+      ++ +
Sbjct: 465 HHPFTAPHPDDLADLKTARAQAYDLVWNGVEVGGGSLRIYQREIQEQVFQAIGLTPEQAR 524

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +K     E +             P   GIA G DRLVML+ G ++I +VI  P
Sbjct: 525 DKFGFLLEAFE---------YGTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFP 568


>gi|322700758|gb|EFY92511.1| hypothetical protein MAC_01477 [Metarhizium acridum CQMa 102]
          Length = 545

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/329 (14%), Positives = 97/329 (29%), Gaps = 34/329 (10%)

Query: 45  DSMSLQYS-PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHA 103
               +  S            T    +     P YL  S +    + LA     ++  +  
Sbjct: 218 HPPIITSSDCEGAGEAFTVKTGSKAEFFRD-PKYLTVSTQLHL-EALAQSLGNVWTLSPT 275

Query: 104 WRNGEQGC-LHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
           +R  +     H  EF MLE   +      ++M    ++++  A+       + +      
Sbjct: 276 FRAEQSDTSRHLSEFYMLEAEMSFVNDMNEVMDLVQSMLKNLAQGLKGLRAANELAQNRL 335

Query: 162 FSEPE--------YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
            S            +   E   R+  +   +        +      + Q    +  H   
Sbjct: 336 DSRDPAERLAFADLVEQEELDRRWTGLLSPSQWPRITYTE---AIERLQPVANQFEHKPV 392

Query: 214 WSDIFSRILIEKIEPNLGINC------CTILDRYPAPE-SALANIYPADPRFTKRFELYA 266
           W         + +   +G++          + +YP    +       + P   +  + + 
Sbjct: 393 WGSGLQSEHEKYLAREVGVDKANSAYLPIFITQYPREIKAFYMLRSASSPPQGETVDCF- 451

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED-------FLACLT-EMPQ 318
               L  +  EL     + HR  +     K    E     +D       +L       P 
Sbjct: 452 --DLLVPSLGELAGGSMREHRLSELEDNMKLHGLEVPGKKQDRSSGLGWYLDLRRWGCPP 509

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             G  +GFDRL+  +TG  N+ +V+  P 
Sbjct: 510 HGGFGLGFDRLLSYLTGVANVRDVVPFPR 538


>gi|313650638|gb|EFS15040.1| aspartyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|333003477|gb|EGK23020.1| aspartyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333018637|gb|EGK37931.1| aspartyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 577

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 96  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 155

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 156 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 209

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 210 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 259

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 260 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 305



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            LL    +  G+          +    + E      G+         P   +A       
Sbjct: 395 ALLLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 453

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 454 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 503

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 504 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 542


>gi|84994498|ref|XP_951971.1| asparaginyl-trna synthetase [Theileria annulata strain Ankara]
 gi|65302132|emb|CAI74239.1| asparaginyl-trna synthetase, putative [Theileria annulata]
          Length = 704

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/275 (18%), Positives = 84/275 (30%), Gaps = 20/275 (7%)

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKD 135
           +L  S + S +    +    ++ F   +R        H  EF M+E          LM+ 
Sbjct: 439 FLTCSGQLSAENYCCS-MGSVYTFGPTFRAENSHTNRHLSEFWMIEPEMTLVDLPGLMEL 497

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               I+       +        N +           E  +R  NI     +         
Sbjct: 498 TEEFIKFLVNYILK-------HNYDDLVFFNNTVDKELLSRLYNIVNKEFVHLSYTGVID 550

Query: 196 LLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           +L    +Q   +     D  W           I      N   I+  YP    A      
Sbjct: 551 ILQEYIKQNPEQPFEYNDVHWGIDLQSEHERFISEK-VFNGPVIIYNYPKQIKAFYMRRN 609

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-C 312
            D +     +L    I       EL+   ++  RF+   +  K+           +L   
Sbjct: 610 DDDKTVAAMDLIIPKI------GELIGGSQREERFDYLEKSIKENKLNMQDY-WWYLDLR 662

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  SG  +GF+RL+M+VTG  NI +VI  P 
Sbjct: 663 RYGTIVHSGFGLGFERLIMMVTGVQNIKDVIPFPR 697



 Score = 38.9 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 22/63 (34%), Gaps = 8/63 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       +  R+ +  ++  +F    F  ++S  +  +       +  F    +
Sbjct: 281 AHLRPRTYLISAVMRIRSSLSIAIHLFFQSKNFHYLNSPVITTADCEGAGEL--FQVTTM 338

Query: 68  IQD 70
            ++
Sbjct: 339 FEN 341


>gi|261332072|emb|CBH15065.1| aspartyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 541

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/416 (13%), Positives = 117/416 (28%), Gaps = 86/416 (20%)

Query: 3   QIPSQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDSM- 47
            +P  P  +++     R                +   +    S R   +   F+E+ +  
Sbjct: 136 PLPF-PLHDQNAKLDTRLNNRYIDMRTPLAVAMIRLVSAAAQSFRTQLLSRDFVELHTPK 194

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +  +    + +          D+  +  +L  SP+   +  +     ++F     +R  
Sbjct: 195 IIGTASEGGSAL-------FSLDYFGRQAFLAQSPQLYKQMAIMGDGMRVFEIGPVFRAE 247

Query: 108 EQ-GCLHQPE-------FTMLEWYRAHES---------YEQLMKDCMNIIRCAAEVANQK 150
           +     H  E       FT+ E+Y                +L  +    I  A     + 
Sbjct: 248 KSLTHRHLTEFTGLDAEFTVDEFYTELLDVLESILCGMIWKLQTENAEWISQARAALMEL 307

Query: 151 IFSFQNVNCNPFSEPEYITVAE-----AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
             +       P  E     VAE        R+ +         P +P     + +   +G
Sbjct: 308 DSAEDCGTVVPRREDIVCEVAEEIIAMYNIRFDDAASRIAPSVPTEPSEDRYHARIGTSG 367

Query: 206 IRVAHDDTWSDIF--------------------------------SRILIEKIEPNLGIN 233
            +V        +                                  R L E I    G++
Sbjct: 368 PKVLRMTFRDALQLIRDNDHQHAGRQQEVAGESDGEVVVDFNLNQERALGELIRLRYGVD 427

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +     A        +P++      F++Y    E+C+    + D  +  H  E+   
Sbjct: 428 LYVVDQFPLAARPFYTMPHPSEEGVACGFDMYLRGEEICSGGQRIHDVAQLIHSMEQ--- 484

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  E   +  D++           G  +G +R+V+ + GA +I  V   P  
Sbjct: 485 ----RRMEAAHM-RDYVDSFRYGAWPHGGFGLGLERIVLFLLGARDIRRVSLFPRD 535


>gi|213417368|ref|ZP_03350510.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 264

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 84/279 (30%), Gaps = 24/279 (8%)

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQ 131
            K  +L  S + + +    A   KI+ F   +R        H  EF MLE   A    E 
Sbjct: 1   GKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFADLED 59

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
             +    +++   +   ++    +  +   F+E           R+ + D          
Sbjct: 60  NARLAEAMLKYVFKAVLEE----RADDMKFFAERVDKDAIARLERFVSTDFAQV------ 109

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
            D        ++ G    +   W    S      +          +   YP    A    
Sbjct: 110 -DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVK-NYPKEIKAFYMR 167

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              D +             L     E++   ++  R +       ++       D  +  
Sbjct: 168 LNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDARMAEMGL--NKEDYWWYR 219

Query: 312 CL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 220 DLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 258


>gi|110805810|ref|YP_689330.1| aspartyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|123048148|sp|Q0T3U0|SYD_SHIF8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110615358|gb|ABF04025.1| aspartate tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 590

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            LL    +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALLLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|258424055|ref|ZP_05686937.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845676|gb|EEV69708.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 588

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 67/187 (35%), Gaps = 21/187 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+ I  S+R+Y  E  F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQITRSIRQYLDEEGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +++   +       +              +T  EA  RY   D   T    +
Sbjct: 249 DVMQMGEEMLKKVVKEVKDVEIN---------DAFPRMTYKEAMRRY-GSDKPDTRFEME 298

Query: 191 QPDRHLL 197
             D   L
Sbjct: 299 LIDVSQL 305



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P            
Sbjct: 410 ALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 EEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|24113215|ref|NP_707725.1| aspartyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|46577188|sp|Q7UAE6|SYD_SHIFL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24052211|gb|AAN43432.1| aspartate tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|281601281|gb|ADA74265.1| Aspartyl-tRNA synthetase [Shigella flexneri 2002017]
          Length = 590

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            LL    +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALLLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|325496991|gb|EGC94850.1| aspartyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 577

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 96  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 155

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 156 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 209

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 210 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 259

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 260 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 305



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 395 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 453

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 454 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 503

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 504 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 542


>gi|73984265|ref|XP_856761.1| PREDICTED: similar to Aspartyl-tRNA synthetase (Aspartate--tRNA
           ligase) (AspRS) isoform 3 [Canis familiaris]
          Length = 382

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 90/272 (33%), Gaps = 27/272 (9%)

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
           +  +   +  + A  EK+FC    +R  +     H  EF  L+   A   +   + + + 
Sbjct: 129 SCTQQDKQMCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVVEEIA 188

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
                     QK F  +    N     E     E   R                +     
Sbjct: 189 DTLVQIFKGLQKRFQTEIQTVNKQFPCEPFKFLEPTLR---------------LEYCEAL 233

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPR 257
              ++AGI +  ++  S    ++L   ++     +   ILD+YP           P +P+
Sbjct: 234 AMLREAGIEMGDEEDLSTPNEKLLGRLVKEKYDTD-FYILDKYPLAVRPFYTMPDPRNPK 292

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
            +  ++++    E+ +    + DP     R          I  E     + ++       
Sbjct: 293 QSNSYDMFMRGEEILSGAQRIHDPQLLTER-----ALHHGIDLEKI---KAYIDSFRFGA 344

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 345 PPHAGGGIGLERVTMLFLGLHNVRQTSMFPRD 376


>gi|332756767|gb|EGJ87114.1| aspartyl-tRNA synthetase [Shigella flexneri 4343-70]
          Length = 573

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 92  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 151

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 152 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 205

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 206 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 255

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 256 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 301



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            LL    +  G+          +    + E      G+         P   +A       
Sbjct: 391 ALLLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 449

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 450 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 499

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 500 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 538


>gi|307314222|ref|ZP_07593832.1| aspartyl-tRNA synthetase [Escherichia coli W]
 gi|306906191|gb|EFN36709.1| aspartyl-tRNA synthetase [Escherichia coli W]
 gi|315061172|gb|ADT75499.1| aspartyl-tRNA synthetase [Escherichia coli W]
 gi|323378251|gb|ADX50519.1| aspartyl-tRNA synthetase [Escherichia coli KO11]
          Length = 590

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELNAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|300935841|ref|ZP_07150799.1| aspartyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300458953|gb|EFK22446.1| aspartyl-tRNA synthetase [Escherichia coli MS 21-1]
          Length = 590

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 21/188 (11%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +       L     +  G+          +    + E 
Sbjct: 382 ERTGAQDGDMIFFGADNKKIVAD---AMGALRLKVGKDLGLTDESKWAPLWVIDFPMFED 438

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
                G+         P   +A       +      +++     E+      + +   Q+
Sbjct: 439 DGE-GGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQ 497

Query: 286 HRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
             F      E+E +EK              L  L    P  +G+A G DRL ML+TG +N
Sbjct: 498 TVFGILGINEEEQREKFG----------FLLDALKYGTPPHAGLAFGLDRLTMLLTGTDN 547

Query: 339 INEVIWTP 346
           I +VI  P
Sbjct: 548 IRDVIAFP 555


>gi|331647463|ref|ZP_08348555.1| aspartate--tRNA ligase [Escherichia coli M605]
 gi|281178936|dbj|BAI55266.1| aspartyl-tRNA synthetase [Escherichia coli SE15]
 gi|330911676|gb|EGH40186.1| aspartyl-tRNA synthetase [Escherichia coli AA86]
 gi|331043187|gb|EGI15325.1| aspartate--tRNA ligase [Escherichia coli M605]
          Length = 590

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 21/188 (11%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +       L     +  G+          +    + E 
Sbjct: 382 ERTGAQDGDMIFFGADNKKIVAD---AMGSLRLKVGKDLGLTDESKWAPLWVIDFPMFED 438

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
                G+         P   +A       +      +++     E+      + +   Q+
Sbjct: 439 DGE-GGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQ 497

Query: 286 HRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
             F      E+E +EK              L  L    P  +G+A G DRL ML+TG +N
Sbjct: 498 TVFGILGINEEEQREKFG----------FLLDALKYGTPPHAGLAFGLDRLTMLLTGTDN 547

Query: 339 INEVIWTP 346
           I +VI  P
Sbjct: 548 IRDVIAFP 555


>gi|218699562|ref|YP_002407191.1| aspartyl-tRNA synthetase [Escherichia coli IAI39]
 gi|226736537|sp|B7NS52|SYD_ECO7I RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218369548|emb|CAR17317.1| aspartyl-tRNA synthetase [Escherichia coli IAI39]
          Length = 590

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVASAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|218548573|ref|YP_002382364.1| aspartyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226736541|sp|B7LPH8|SYD_ESCF3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218356114|emb|CAQ88731.1| aspartyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|323968288|gb|EGB63695.1| aspartyl-tRNA synthetase [Escherichia coli M863]
 gi|323977949|gb|EGB73035.1| aspartyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324113602|gb|EGC07577.1| aspartyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 590

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|312967069|ref|ZP_07781287.1| aspartyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|312288533|gb|EFR16435.1| aspartyl-tRNA synthetase [Escherichia coli 2362-75]
          Length = 577

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 96  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 155

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 156 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 209

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 210 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 259

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 260 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 305



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 21/188 (11%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +       L     +  G+          +    + E 
Sbjct: 369 ERTGAQDGDMIFFGADNKKIVAD---AMGALRLKVGKDLGLTDESKWAPLWVIDFPMFED 425

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
                G+         P   +A       +      +++     E+      + +   Q+
Sbjct: 426 DGE-GGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQ 484

Query: 286 HRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
             F      E+E +EK              L  L    P  +G+A G DRL ML+TG +N
Sbjct: 485 TVFGILGINEEEQREKFG----------FLLDALKYGTPPHAGLAFGLDRLTMLLTGTDN 534

Query: 339 INEVIWTP 346
           I +VI  P
Sbjct: 535 IRDVIAFP 542


>gi|312969907|ref|ZP_07784090.1| aspartyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|310338192|gb|EFQ03281.1| aspartyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|320198060|gb|EFW72668.1| aspartyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323152645|gb|EFZ38921.1| aspartyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323158649|gb|EFZ44663.1| aspartyl-tRNA synthetase [Escherichia coli E128010]
 gi|323180663|gb|EFZ66208.1| aspartyl-tRNA synthetase [Escherichia coli 1180]
 gi|323186358|gb|EFZ71708.1| aspartyl-tRNA synthetase [Escherichia coli 1357]
          Length = 577

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 96  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 155

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 156 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 209

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 210 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 259

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 260 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 305



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 395 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 453

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 454 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 503

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 504 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 542


>gi|74311804|ref|YP_310223.1| aspartyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|97196882|sp|Q3Z2M4|SYD_SHISS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|73855281|gb|AAZ87988.1| aspartate tRNA synthetase [Shigella sonnei Ss046]
          Length = 590

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|215487079|ref|YP_002329510.1| aspartyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|254781731|sp|B7USP3|SYD_ECO27 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|215265151|emb|CAS09539.1| aspartyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
          Length = 590

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 21/188 (11%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +       L     +  G+          +    + E 
Sbjct: 382 ERTGAQDGDMIFFGADNKKIVAD---AMGALRLKVGKDLGLTDESKWAPLWVIDFPMFED 438

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
                G+         P   +A       +      +++     E+      + +   Q+
Sbjct: 439 DGE-GGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQ 497

Query: 286 HRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
             F      E+E +EK              L  L    P  +G+A G DRL ML+TG +N
Sbjct: 498 TVFGILGINEEEQREKFG----------FLLDALKYGTPPHAGLAFGLDRLTMLLTGTDN 547

Query: 339 INEVIWTP 346
           I +VI  P
Sbjct: 548 IRDVIAFP 555


>gi|325997490|gb|ADZ49698.1| Aspartyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 577

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 100/344 (29%), Gaps = 18/344 (5%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  EN  + +    LQ        T  + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDENDVMGVVEDLLQAIFKAIGHTISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
            +        Y    P+   +  L    +     ++A  +             L    A 
Sbjct: 269 RMPYKEAMENYGSDKPDLRFELPLIEVGDCFMDSSNAIFSNIAKDPKNKRIKALNVKGAD 328

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANIDLGTT 185
             + + +   +                 +      P  +       ++     ++ +G  
Sbjct: 329 ALFSRSVLKELEEFVRQFGAKGLAYLQIKENEVKGPLVKFLSEKGLKSILEKTDVQVGDI 388

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           +      D+ ++     +  ++VA   D    D  + + +                 +P 
Sbjct: 389 V-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPF 447

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                      +      +++    +EL      +     Q+  FEK          E  
Sbjct: 448 TMPKNIECEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQ 503

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 L  L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 504 KKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 65/219 (29%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQAIFKAIGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNAIFSNIAKDPKNKRI 319


>gi|82543705|ref|YP_407652.1| aspartyl-tRNA synthetase [Shigella boydii Sb227]
 gi|157155835|ref|YP_001463169.1| aspartyl-tRNA synthetase [Escherichia coli E24377A]
 gi|170019789|ref|YP_001724743.1| aspartyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170682211|ref|YP_001743378.1| aspartyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187733090|ref|YP_001879756.1| aspartyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|191168067|ref|ZP_03029866.1| aspartyl-tRNA synthetase [Escherichia coli B7A]
 gi|193066060|ref|ZP_03047117.1| aspartyl-tRNA synthetase [Escherichia coli E22]
 gi|193069878|ref|ZP_03050827.1| aspartyl-tRNA synthetase [Escherichia coli E110019]
 gi|194429644|ref|ZP_03062162.1| aspartyl-tRNA synthetase [Escherichia coli B171]
 gi|194433940|ref|ZP_03066212.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|209919233|ref|YP_002293317.1| aspartyl-tRNA synthetase [Escherichia coli SE11]
 gi|218554454|ref|YP_002387367.1| aspartyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218695432|ref|YP_002403099.1| aspartyl-tRNA synthetase [Escherichia coli 55989]
 gi|218705367|ref|YP_002412886.1| aspartyl-tRNA synthetase [Escherichia coli UMN026]
 gi|256017930|ref|ZP_05431795.1| aspartyl-tRNA synthetase [Shigella sp. D9]
 gi|260844209|ref|YP_003221987.1| aspartyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260855806|ref|YP_003229697.1| aspartyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260868401|ref|YP_003234803.1| aspartyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|293410178|ref|ZP_06653754.1| aspartyl-tRNA synthetase [Escherichia coli B354]
 gi|293446253|ref|ZP_06662675.1| aspartyl-tRNA synthetase [Escherichia coli B088]
 gi|298381003|ref|ZP_06990602.1| aspartyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300816242|ref|ZP_07096464.1| aspartyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300899116|ref|ZP_07117399.1| aspartyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300917557|ref|ZP_07134212.1| aspartyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|301018298|ref|ZP_07182807.1| aspartyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|309794247|ref|ZP_07688671.1| aspartyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|331653275|ref|ZP_08354280.1| aspartate--tRNA ligase [Escherichia coli M718]
 gi|331663363|ref|ZP_08364273.1| aspartate--tRNA ligase [Escherichia coli TA143]
 gi|331668561|ref|ZP_08369409.1| aspartate--tRNA ligase [Escherichia coli TA271]
 gi|331673396|ref|ZP_08374164.1| aspartate--tRNA ligase [Escherichia coli TA280]
 gi|331677747|ref|ZP_08378422.1| aspartate--tRNA ligase [Escherichia coli H591]
 gi|331683372|ref|ZP_08383973.1| aspartate--tRNA ligase [Escherichia coli H299]
 gi|332278964|ref|ZP_08391377.1| aspartyl-tRNA synthetase [Shigella sp. D9]
 gi|97196865|sp|Q322D4|SYD_SHIBS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166979741|sp|A7ZMZ0|SYD_ECO24 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082097|sp|B1J0M2|SYD_ECOLC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736538|sp|B7M2F7|SYD_ECO8A RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736539|sp|B7NBL7|SYD_ECOLU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736540|sp|B1LD05|SYD_ECOSM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238064707|sp|B6IBU5|SYD_ECOSE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238691719|sp|B2TXL2|SYD_SHIB3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781732|sp|B7L7R9|SYD_ECO55 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|81245116|gb|ABB65824.1| aspartate tRNA synthetase [Shigella boydii Sb227]
 gi|157077865|gb|ABV17573.1| aspartyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169754717|gb|ACA77416.1| aspartyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|170519929|gb|ACB18107.1| aspartyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|187430082|gb|ACD09356.1| aspartyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|190901865|gb|EDV61615.1| aspartyl-tRNA synthetase [Escherichia coli B7A]
 gi|192926297|gb|EDV80934.1| aspartyl-tRNA synthetase [Escherichia coli E22]
 gi|192956778|gb|EDV87232.1| aspartyl-tRNA synthetase [Escherichia coli E110019]
 gi|194412286|gb|EDX28590.1| aspartyl-tRNA synthetase [Escherichia coli B171]
 gi|194417812|gb|EDX33909.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|195182928|dbj|BAG66496.1| aspartate tRNA synthetase [Escherichia coli O111:H-]
 gi|209912492|dbj|BAG77566.1| aspartyl-tRNA synthase [Escherichia coli SE11]
 gi|218352164|emb|CAU97903.1| aspartyl-tRNA synthetase [Escherichia coli 55989]
 gi|218361222|emb|CAQ98806.1| aspartyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218432464|emb|CAR13357.1| aspartyl-tRNA synthetase [Escherichia coli UMN026]
 gi|257754455|dbj|BAI25957.1| aspartyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257759356|dbj|BAI30853.1| aspartyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257764757|dbj|BAI36252.1| aspartyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|291323083|gb|EFE62511.1| aspartyl-tRNA synthetase [Escherichia coli B088]
 gi|291470646|gb|EFF13130.1| aspartyl-tRNA synthetase [Escherichia coli B354]
 gi|298278445|gb|EFI19959.1| aspartyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300357273|gb|EFJ73143.1| aspartyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|300399734|gb|EFJ83272.1| aspartyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300415211|gb|EFJ98521.1| aspartyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300530932|gb|EFK51994.1| aspartyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|308122152|gb|EFO59414.1| aspartyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|323948248|gb|EGB44236.1| aspartyl-tRNA synthetase [Escherichia coli H120]
 gi|324018009|gb|EGB87228.1| aspartyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324118926|gb|EGC12815.1| aspartyl-tRNA synthetase [Escherichia coli E1167]
 gi|331049373|gb|EGI21445.1| aspartate--tRNA ligase [Escherichia coli M718]
 gi|331059162|gb|EGI31139.1| aspartate--tRNA ligase [Escherichia coli TA143]
 gi|331063755|gb|EGI35666.1| aspartate--tRNA ligase [Escherichia coli TA271]
 gi|331069594|gb|EGI40981.1| aspartate--tRNA ligase [Escherichia coli TA280]
 gi|331074207|gb|EGI45527.1| aspartate--tRNA ligase [Escherichia coli H591]
 gi|331079587|gb|EGI50784.1| aspartate--tRNA ligase [Escherichia coli H299]
 gi|332095228|gb|EGJ00255.1| aspartyl-tRNA synthetase [Shigella dysenteriae 155-74]
 gi|332101316|gb|EGJ04662.1| aspartyl-tRNA synthetase [Shigella sp. D9]
          Length = 590

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|299535680|ref|ZP_07049001.1| aspartyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728880|gb|EFI69434.1| aspartyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 589

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 72/226 (31%), Gaps = 23/226 (10%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R               R+ +  ++R +     F+E+++  L   +P     ++ 
Sbjct: 123 DLRLKYRYLDLRRPVMFDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLV 182

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ AG EK F  A  +R+ +     QPEFT +
Sbjct: 183 PSRVHEGEFYALPQ------SPQLFKQLLMVAGFEKYFQIARCFRDEDLRADRQPEFTQV 236

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E++++    +I+   +                    +     +   R+   
Sbjct: 237 DIETSFLTQEEVLEMNERLIQAVMKEVKGIDIPAPFQRMKYQEAMDRYGSDKPDVRFGLE 296

Query: 181 -----DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                D+    +     D      Q +   I+ A D         +
Sbjct: 297 LVALNDIFEGCNFKVFADTVAQGKQVKSINIKGAADKYSRKDMDEL 342



 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 39/131 (29%), Gaps = 5/131 (3%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           I    L E  E +            P  E              + +++     EL     
Sbjct: 430 ITDWPLFEYSEEDGRYYAAHHPFTRPFDEDIALMDTDPAAVRAQAYDIVLNGYELGGGSL 489

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
            + +   Q   FE           E        L      +P  +G+A G DR VML+ G
Sbjct: 490 RIYERDLQEKMFE----LLGFSEEEAQAQFGFLLEAFEYGVPPHAGLAFGLDRFVMLLAG 545

Query: 336 ANNINEVIWTP 346
             N+ + I  P
Sbjct: 546 RTNLRDTIAFP 556


>gi|293415181|ref|ZP_06657824.1| aspartyl-tRNA synthetase [Escherichia coli B185]
 gi|291432829|gb|EFF05808.1| aspartyl-tRNA synthetase [Escherichia coli B185]
          Length = 590

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|146329788|ref|YP_001210002.1| aspartyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|146233258|gb|ABQ14236.1| aspartyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 595

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 83/221 (37%), Gaps = 35/221 (15%)

Query: 1   MHQIPSQPWWN-------RDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIE 43
           + Q P+ P+          +   + R            L+ R+ + +SLR Y  E+ F++
Sbjct: 105 LSQSPTPPFQLDDLTDVSEEVRLKYRTIDLRRPQMQKNLILRSKVAASLRRYLNEHGFMD 164

Query: 44  IDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           I++  L   +P     ++    T       + +      SP+   + L+ +G ++ +   
Sbjct: 165 IETPMLTKATPEGARDYLVPSRTHPGKVFALPQ------SPQLFKQMLMMSGFDRYYQIV 218

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +R+ +     QPEFT L+   +    E +M+    +IR             ++++ + 
Sbjct: 219 RCFRDEDLRADRQPEFTQLDIETSFLEEEDIMQLMETMIRG---------IFKEHLDVDL 269

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
                 +T AEA  RYA+ D        +  D   L     
Sbjct: 270 IDPFPRMTYAEAMRRYAS-DKPDLRIPLELIDVEDLVADCD 309



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 46/147 (31%), Gaps = 17/147 (11%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
                 +    + E  E              P  +             ++ +++     E
Sbjct: 429 PWAPMWVVDFPMFEFDEKEHRWTSVHHPFTAPKTDDLSELENNPAAVVSRAYDMVLNGTE 488

Query: 271 LCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIA 323
           +      +     Q    +      ++ QEK              L  L    P   GIA
Sbjct: 489 IGGGSIRIHREDVQTQVLKSLGIDAEQAQEKFG----------FLLNALKYGAPPHGGIA 538

Query: 324 MGFDRLVMLVTGANNINEVIWTPFSQS 350
            G DRL+M++ GA +I +V+  P +Q+
Sbjct: 539 FGLDRLIMIMAGAKSIRDVMAFPKTQT 565


>gi|300904750|ref|ZP_07122580.1| aspartyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|301304455|ref|ZP_07210567.1| aspartyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300403334|gb|EFJ86872.1| aspartyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300840306|gb|EFK68066.1| aspartyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|315257302|gb|EFU37270.1| aspartyl-tRNA synthetase [Escherichia coli MS 85-1]
          Length = 590

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|298694909|gb|ADI98131.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 588

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 21/187 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+ I  S+R+Y  +  F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +++   +       +              +T  EA  RY   D   T    +
Sbjct: 249 DVMQMGEEMLKKVVKEVKGVEIN---------GAFPRMTYKEAMRRY-GSDKPDTRFEME 298

Query: 191 QPDRHLL 197
             D   L
Sbjct: 299 LIDVSQL 305



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P            
Sbjct: 410 ALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 EEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|283470906|emb|CAQ50117.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 588

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 21/187 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+ I  S+R+Y  +  F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +++   +       +              +T  EA  RY   D   T    +
Sbjct: 249 DVMQMGEEMLKKVVKEVKGVEIN---------DAFPRMTYKEAMRRY-GSDKPDTRFEME 298

Query: 191 QPDRHLL 197
             D   L
Sbjct: 299 LIDVSQL 305



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P            
Sbjct: 410 ALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 EEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|222033615|emb|CAP76356.1| Aspartyl-tRNA synthetase [Escherichia coli LF82]
          Length = 590

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 21/188 (11%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +       L     +  G+          +    + E 
Sbjct: 382 ERTGAQDGDMIFFGADNKKIVAD---AMGALRLKVGKDLGLTDESKWAPLWVIDFPMFED 438

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
                G+         P   +A       +      +++     E+      + +   Q+
Sbjct: 439 DGE-GGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQ 497

Query: 286 HRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
             F      E+E +EK              L  L    P  +G+A G DRL ML+TG +N
Sbjct: 498 TVFGILGINEEEQREKFG----------FLLDALKYGTPPHAGLAFGLDRLAMLLTGTDN 547

Query: 339 INEVIWTP 346
           I +VI  P
Sbjct: 548 IRDVIAFP 555


>gi|126654003|ref|ZP_01725838.1| aspartyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589520|gb|EAZ83663.1| aspartyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 589

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 23/226 (10%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R               R+ +  ++R +     F+E+++  L   +P     ++ 
Sbjct: 123 DLRLKYRYLDLRRPVMFDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLV 182

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ AG EK F  A  +R+ +     QPEFT +
Sbjct: 183 PSRVHEGEFYALPQ------SPQLFKQLLMVAGFEKYFQIARCFRDEDLRADRQPEFTQV 236

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E++++    +I+   +                    +     +   R+   
Sbjct: 237 DIETSFLTQEEVLEMNERLIQAVMKEVKGIDIPAPFQRMKYQEAMDRYGSDKPDVRFGLE 296

Query: 181 -----DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                D+          D      Q +   I+ A D         +
Sbjct: 297 LVALNDVFEDCGFKVFADTVAQGKQVKSINIKGAADKYSRKDMDEL 342



 Score = 87.0 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 47/149 (31%), Gaps = 9/149 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP--APESALANIYPADPR--F 258
           + G  +   D     F  I    +      +       +P   P      +   DP    
Sbjct: 412 KLGQDLELIDESQFAFLWITDWPLFEYSEEDGRYYAAHHPFTRPFDEDIPLMDTDPGAVR 471

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            + +++     EL      + +   Q   FE           E        L      +P
Sbjct: 472 AQAYDIVLNGYELGGGSLRIYERDLQEKMFE----LLGFSEEEAQAQFGFLLEAFEYGVP 527

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +G+A G DR VML+ G +N+ + I  P
Sbjct: 528 PHAGLAFGLDRFVMLLAGRHNLRDTIAFP 556


>gi|26248132|ref|NP_754172.1| aspartyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91211091|ref|YP_541077.1| aspartyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110641984|ref|YP_669714.1| aspartyl-tRNA synthetase [Escherichia coli 536]
 gi|117624018|ref|YP_852931.1| aspartyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|191172971|ref|ZP_03034505.1| aspartyl-tRNA synthetase [Escherichia coli F11]
 gi|218558731|ref|YP_002391644.1| aspartyl-tRNA synthetase [Escherichia coli S88]
 gi|218689804|ref|YP_002398016.1| aspartyl-tRNA synthetase [Escherichia coli ED1a]
 gi|227885706|ref|ZP_04003511.1| aspartyl-tRNA synthetase [Escherichia coli 83972]
 gi|237705820|ref|ZP_04536301.1| aspartyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|300982170|ref|ZP_07175905.1| aspartyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300994105|ref|ZP_07180688.1| aspartyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301050780|ref|ZP_07197637.1| aspartyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|306814304|ref|ZP_07448470.1| aspartyl-tRNA synthetase [Escherichia coli NC101]
 gi|331657915|ref|ZP_08358877.1| aspartate--tRNA ligase [Escherichia coli TA206]
 gi|29336537|sp|Q8FGQ9|SYD_ECOL6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123266056|sp|Q1RAR8|SYD_ECOUT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123343924|sp|Q0TGW6|SYD_ECOL5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225343|sp|A1AC27|SYD_ECOK1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736536|sp|B7MBS5|SYD_ECO45 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781733|sp|B7MVZ7|SYD_ECO81 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|26108535|gb|AAN80737.1|AE016761_312 Aspartyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91072665|gb|ABE07546.1| aspartyl-tRNA synthetase [Escherichia coli UTI89]
 gi|110343576|gb|ABG69813.1| aspartyl-tRNA synthetase [Escherichia coli 536]
 gi|115513142|gb|ABJ01217.1| aspartyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|190906682|gb|EDV66287.1| aspartyl-tRNA synthetase [Escherichia coli F11]
 gi|218365500|emb|CAR03227.1| aspartyl-tRNA synthetase [Escherichia coli S88]
 gi|218427368|emb|CAR08263.2| aspartyl-tRNA synthetase [Escherichia coli ED1a]
 gi|226900577|gb|EEH86836.1| aspartyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|227837279|gb|EEJ47745.1| aspartyl-tRNA synthetase [Escherichia coli 83972]
 gi|294492571|gb|ADE91327.1| aspartyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|300297535|gb|EFJ53920.1| aspartyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300307326|gb|EFJ61846.1| aspartyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300406367|gb|EFJ89905.1| aspartyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|305852463|gb|EFM52914.1| aspartyl-tRNA synthetase [Escherichia coli NC101]
 gi|307553885|gb|ADN46660.1| aspartate tRNA synthetase [Escherichia coli ABU 83972]
 gi|307626651|gb|ADN70955.1| aspartyl-tRNA synthetase [Escherichia coli UM146]
 gi|312946466|gb|ADR27293.1| aspartyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315286565|gb|EFU46000.1| aspartyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315290345|gb|EFU49721.1| aspartyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315296557|gb|EFU55854.1| aspartyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|323952368|gb|EGB48241.1| aspartyl-tRNA synthetase [Escherichia coli H252]
 gi|323956497|gb|EGB52239.1| aspartyl-tRNA synthetase [Escherichia coli H263]
 gi|324007227|gb|EGB76446.1| aspartyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324012865|gb|EGB82084.1| aspartyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|331056163|gb|EGI28172.1| aspartate--tRNA ligase [Escherichia coli TA206]
          Length = 590

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 21/188 (11%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +       L     +  G+          +    + E 
Sbjct: 382 ERTGAQDGDMIFFGADNKKIVAD---AMGALRLKVGKDLGLTDESKWAPLWVIDFPMFED 438

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
                G+         P   +A       +      +++     E+      + +   Q+
Sbjct: 439 DGE-GGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQ 497

Query: 286 HRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
             F      E+E +EK              L  L    P  +G+A G DRL ML+TG +N
Sbjct: 498 TVFGILGINEEEQREKFG----------FLLDALKYGTPPHAGLAFGLDRLTMLLTGTDN 547

Query: 339 INEVIWTP 346
           I +VI  P
Sbjct: 548 IRDVIAFP 555


>gi|323442834|gb|EGB00459.1| aspartyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 588

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 21/187 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+ I  S+R+Y  +  F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +++   +       +              +T  EA  RY   D   T    +
Sbjct: 249 DVMQMGEEMLKKVVKEVKGVEIN---------GAFPRMTYKEAMRRY-GSDKPDTRFEME 298

Query: 191 QPDRHLL 197
             D   L
Sbjct: 299 LIDVSQL 305



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P            
Sbjct: 410 ALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 EEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNKTNLRDTIAFP 558


>gi|189082093|sp|A9KF44|SYD_COXBN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 590

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 69/211 (32%), Gaps = 22/211 (10%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTEL 66
               +   R    L  R+ I   +R +  E  F++I++  L   +P     ++    T  
Sbjct: 131 LRRPEVAQR----LKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVPSRTHP 186

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                  +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT L+   + 
Sbjct: 187 ------GQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQPEFTQLDLEMSF 240

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              + + +    +IR               +N         IT  EA   Y   D     
Sbjct: 241 VEEKDIQQLMETMIRHLFST---------FLNVPLPDPFPRITYDEAIKTY-GTDRPDLR 290

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +     D   L    +    +   ++    I
Sbjct: 291 NPLTLVDVTDLMKSVEFKVFKEPANNPHGRI 321



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
           A + +              +   E                       I       ++ ++
Sbjct: 418 ADLNLYEGQWKPVWVVDFPMFDREDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 477

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           +     E+      + D   Q    +     K+    E        L  L    P   GI
Sbjct: 478 IVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMA--EAQF--GHLLMALQFGSPPLGGI 533

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           A G DRLV ++TGA++I +VI  P +Q+ Q
Sbjct: 534 AFGLDRLVAIMTGASSIRDVIAFPKTQTAQ 563


>gi|320174355|gb|EFW49504.1| aspartyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 573

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 92  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 151

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 152 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 205

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 206 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 255

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 256 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 301



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 391 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKVAP 449

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 450 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 499

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 500 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 538


>gi|301029316|ref|ZP_07192413.1| aspartyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|299877742|gb|EFI85953.1| aspartyl-tRNA synthetase [Escherichia coli MS 196-1]
          Length = 577

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 96  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 155

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 156 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 209

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 210 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 259

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 260 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 305



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 395 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 453

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 454 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 503

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 504 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 542


>gi|327252995|gb|EGE64649.1| aspartyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 573

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 92  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 151

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 152 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 205

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 206 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 255

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 256 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 301



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 391 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 449

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 450 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 499

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 500 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 538


>gi|315617911|gb|EFU98509.1| aspartyl-tRNA synthetase [Escherichia coli 3431]
          Length = 553

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 72  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 131

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 132 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 185

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 186 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 235

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 236 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 281



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 371 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 429

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 430 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 479

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 480 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 518


>gi|330683918|gb|EGG95686.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 588

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 66/179 (36%), Gaps = 20/179 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+    S+R+Y  +N F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQTTRSIRQYLDDNGFYDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            +M     ++R   +              +       +T AEA +RY +    T  D  
Sbjct: 249 DVMAMGEEMLRKVVKDVKG---------IDVPGPFPRMTYAEAMSRYGSDKPDTRFDME 298



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  + +            P  E         
Sbjct: 410 ALRIKLAKELGLIDESKLNFLWVTDWPLLEYDDESKRYVAAHHPFTSPKKEDIDKLDSEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + +   Q   FE     K++            L    
Sbjct: 470 ENAQANAYDIVLNGYELGGGSIRMHNGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|71031344|ref|XP_765314.1| asparaginyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68352270|gb|EAN33031.1| asparaginyl-tRNA synthetase, putative [Theileria parva]
          Length = 710

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 86/278 (30%), Gaps = 26/278 (9%)

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKD 135
           YL  S + S +    +    ++ F   +R        H  EF M+E          LM+ 
Sbjct: 445 YLTCSGQLSAENYCCS-MGSVYTFGPTFRAENSHTNRHLSEFWMIEPEMTLVDLPGLMEI 503

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               I+       +        N +           E  +R  NI     +         
Sbjct: 504 TEEFIKFLVNYILK-------HNYDDLVFFNNTVDKELLSRLYNIVDNEFVHLSYTSVID 556

Query: 196 LLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           +L    +Q   +     D  W           I      N   I+  YP    A      
Sbjct: 557 ILQEYIKQNPEQPFEYNDVHWGIDLQSEHERFISEK-VFNGPVIIYNYPKQIKAFYMRRN 615

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ----EKKKIYNETYPIDEDF 309
            D +     +L    I       EL+   ++  RF+   +     K  + +  + +D   
Sbjct: 616 DDGKTVAAMDLIIPKI------GELIGGSQREERFDYLEKSIKENKLNMQDYWWYMDLR- 668

Query: 310 LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                     SG  +GF+RL+M+VTG  NI +VI  P 
Sbjct: 669 ---RYGTIVHSGFGLGFERLIMMVTGVQNIKDVIPFPR 703



 Score = 38.5 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 22/63 (34%), Gaps = 8/63 (12%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       +  R+ +  ++  +F    F  ++S  +  +       +  F    +
Sbjct: 281 AHLRPRTYLISAVMRVRSSLSIAIHLFFQSKNFHYLNSPVITTADCEGAGEL--FQVTTL 338

Query: 68  IQD 70
            ++
Sbjct: 339 FEN 341


>gi|333004719|gb|EGK24242.1| aspartyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333018440|gb|EGK37738.1| aspartyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 573

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 92  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 151

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 152 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 205

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 206 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 255

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 256 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 301



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 391 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 449

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 450 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 499

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 500 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 538


>gi|323174759|gb|EFZ60375.1| aspartyl-tRNA synthetase [Escherichia coli LT-68]
 gi|332090043|gb|EGI95143.1| aspartyl-tRNA synthetase [Shigella boydii 5216-82]
 gi|332096621|gb|EGJ01615.1| aspartyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 573

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 92  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 151

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 152 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 205

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 206 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 255

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 256 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 301



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 391 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 449

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 450 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 499

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 500 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 538


>gi|300924955|ref|ZP_07140882.1| aspartyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|301327655|ref|ZP_07220863.1| aspartyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|300418891|gb|EFK02202.1| aspartyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300845803|gb|EFK73563.1| aspartyl-tRNA synthetase [Escherichia coli MS 78-1]
          Length = 590

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|16129819|ref|NP_416380.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89108706|ref|AP_002486.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|157161335|ref|YP_001458653.1| aspartyl-tRNA synthetase [Escherichia coli HS]
 gi|170081522|ref|YP_001730842.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188492729|ref|ZP_02999999.1| aspartyl-tRNA synthetase [Escherichia coli 53638]
 gi|194439032|ref|ZP_03071115.1| aspartyl-tRNA synthetase [Escherichia coli 101-1]
 gi|238901081|ref|YP_002926877.1| aspartyl-tRNA synthetase [Escherichia coli BW2952]
 gi|253773177|ref|YP_003036008.1| aspartyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254161926|ref|YP_003045034.1| aspartyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256022468|ref|ZP_05436333.1| aspartyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|297521469|ref|ZP_06939855.1| aspartyl-tRNA synthetase [Escherichia coli OP50]
 gi|300824192|ref|ZP_07104310.1| aspartyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300928897|ref|ZP_07144402.1| aspartyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300951488|ref|ZP_07165323.1| aspartyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300956621|ref|ZP_07168900.1| aspartyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301645618|ref|ZP_07245547.1| aspartyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|135102|sp|P21889|SYD_ECOLI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166979742|sp|A8A166|SYD_ECOHS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229559869|sp|B1XHD4|SYD_ECODH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|259511857|sp|C4ZQF0|SYD_ECOBW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|9256904|pdb|1EQR|A Chain A, Crystal Structure Of Free Aspartyl-Trna Synthetase From
           Escherichia Coli
 gi|9256905|pdb|1EQR|B Chain B, Crystal Structure Of Free Aspartyl-Trna Synthetase From
           Escherichia Coli
 gi|9256906|pdb|1EQR|C Chain C, Crystal Structure Of Free Aspartyl-Trna Synthetase From
           Escherichia Coli
 gi|15988142|pdb|1IL2|A Chain A, Crystal Structure Of The E. Coli Aspartyl-Trna
           Synthetase:yeast Trnaasp:aspartyl-Adenylate Complex
 gi|15988143|pdb|1IL2|B Chain B, Crystal Structure Of The E. Coli Aspartyl-Trna
           Synthetase:yeast Trnaasp:aspartyl-Adenylate Complex
 gi|41015|emb|CAA37856.1| aspartate-tRNA ligase [Escherichia coli K-12]
 gi|1736513|dbj|BAA15677.1| aspartyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|1788173|gb|AAC74936.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|157067015|gb|ABV06270.1| aspartyl-tRNA synthetase [Escherichia coli HS]
 gi|169889357|gb|ACB03064.1| aspartyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188487928|gb|EDU63031.1| aspartyl-tRNA synthetase [Escherichia coli 53638]
 gi|194421991|gb|EDX37995.1| aspartyl-tRNA synthetase [Escherichia coli 101-1]
 gi|238860028|gb|ACR62026.1| aspartyl-tRNA synthetase [Escherichia coli BW2952]
 gi|242377587|emb|CAQ32342.1| aspartyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324221|gb|ACT28823.1| aspartyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253973827|gb|ACT39498.1| aspartyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253978021|gb|ACT43691.1| aspartyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|260449011|gb|ACX39433.1| aspartyl-tRNA synthetase [Escherichia coli DH1]
 gi|300316603|gb|EFJ66387.1| aspartyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300449238|gb|EFK12858.1| aspartyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300463125|gb|EFK26618.1| aspartyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300523263|gb|EFK44332.1| aspartyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|301076150|gb|EFK90956.1| aspartyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|315136509|dbj|BAJ43668.1| aspartyl-tRNA synthetase [Escherichia coli DH1]
 gi|323937124|gb|EGB33404.1| aspartyl-tRNA synthetase [Escherichia coli E1520]
 gi|323940466|gb|EGB36657.1| aspartyl-tRNA synthetase [Escherichia coli E482]
 gi|323961921|gb|EGB57520.1| aspartyl-tRNA synthetase [Escherichia coli H489]
 gi|332343592|gb|AEE56926.1| aspartyl-tRNA synthetase AspS [Escherichia coli UMNK88]
          Length = 590

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|323186874|gb|EFZ72193.1| aspartyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 577

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 96  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 155

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 156 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 209

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 210 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVELG----------DFPVMTF 259

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 260 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 305



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 21/188 (11%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +       L     +  G+          +    + E 
Sbjct: 369 ERTGAQDGDMIFFGADNKKIVAD---AMGALRLKVGKDLGLTDESKWAPLWVIDFPMFED 425

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
                G+         P   +A       +      +++     E+      + +   Q+
Sbjct: 426 DGE-GGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQ 484

Query: 286 HRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
             F      E+E +EK              L  L    P  +G+A G DRL ML+TG +N
Sbjct: 485 TVFGILGINEEEQREKFG----------FLLDALKYGTPPHAGLAFGLDRLTMLLTGTDN 534

Query: 339 INEVIWTP 346
           I +VI  P
Sbjct: 535 IRDVIAFP 542


>gi|320182596|gb|EFW57485.1| aspartyl-tRNA synthetase [Shigella boydii ATCC 9905]
          Length = 573

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 92  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 151

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 152 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 205

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 206 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 255

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 256 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 301



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 391 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 449

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 450 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 499

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 500 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 538


>gi|87311863|ref|ZP_01093975.1| Aspartyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87285394|gb|EAQ77316.1| Aspartyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 594

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 79/234 (33%), Gaps = 20/234 (8%)

Query: 4   IPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET 57
           +P +    +  +   R       L+ R+ I   +R+YF E QFI++++  L   +P    
Sbjct: 119 MPGEDLRLKHRYLDLRRPAMQETLMLRSRIIKMMRDYFEEQQFIDVETPILGRSTPEGAR 178

Query: 58  -HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            ++            + +      SP+   + L+ AG ++    A  +R+ +     QPE
Sbjct: 179 DYLVPSRVHHGHFYALPQ------SPQLYKQILMMAGYDRYVQVARCFRDEDLRADRQPE 232

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT L+   A    + ++     +++  A+                    E         R
Sbjct: 233 FTQLDVEMAFVDKDDVIGIIDGLVQRTAKELKGLDVQLPLPQMTYDEAMERFGHDAPDLR 292

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQ------AGIRVAHDDTWSDIFSRILIE 224
           +  ++L    D   + +  +    A+          + A D     +   +   
Sbjct: 293 F-GMELVDATDLAAEAEFRVFKAVAEAGNRVRGINAKGAADKYSRRLIDELTEF 345



 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 47/159 (29%), Gaps = 17/159 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A +  +       +S I    + +  E              P P+         
Sbjct: 410 ALRKRLAAELKLYDPKQMHFSWIVEFPMFDHDEETDRWVAMHHPFTAPRPQDLEHLESDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  ++L     E       + D   Q+  F       ++ +E+             
Sbjct: 470 GKCRAVAYDLVINGSEAGGGTMRIHDNKVQQQVFGLLGMTPEDAKERFG----------F 519

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P   GIA+G DR VML  G +NI + I  P
Sbjct: 520 LLDALQYGAPPHGGIALGIDRWVMLFGGLDNIRDCIAFP 558


>gi|218187544|gb|EEC69971.1| hypothetical protein OsI_00447 [Oryza sativa Indica Group]
          Length = 719

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 19/189 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              + +  L  R+ +   +R +  +   F+EI++  L   +P     ++     +  +  
Sbjct: 224 RRPQMQSNLRLRHNVVKHIRRFLEDRHDFVEIETPVLSKSTPEGARDYLVPSRVQPGMFY 283

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G EK +  A  +R+ +     QPEFT L+   A  S E
Sbjct: 284 ALPQ------SPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQPEFTQLDMEIAFTSME 337

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++K    ++R   +            +    +    +T  EA  RY   D      +  
Sbjct: 338 DMLKLNEELMRHIFQEVG---------DIKLPNPFPRLTYTEAMNRY-GTDRPDLRFDWQ 387

Query: 191 QPDRHLLYL 199
             D    +L
Sbjct: 388 LKDVSDAFL 396



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 61/173 (35%), Gaps = 16/173 (9%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF-SRILIEKIEPNLGINCCTILD 239
           D      N D+    ++ L  +  G     D  W  ++  +  +  ++    I       
Sbjct: 528 DFPMFEWNSDEQRYEVIVLTNKFKGQYQIIDSFWYFLWSQKRTLTSLQNANLIAMSQKAL 587

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQ 293
            +P       ++          +++    +E+      +     Q+  FE      ++ +
Sbjct: 588 HHPFTAPNPEDMNDLPSARALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAE 647

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           EK     E + +           P   GIA G DRLVML+ G N+I +VI  P
Sbjct: 648 EKFGYLLECFDM---------GAPPHGGIAYGLDRLVMLLAGENSIRDVIAFP 691


>gi|239995587|ref|ZP_04716111.1| lysyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 96

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 1/95 (1%)

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
           R  +RFE+Y    EL N   EL    EQR RFE + +++++    T PIDE+FL+ L   
Sbjct: 2   RVAERFEVYYQGAELANGFHELSAAKEQRLRFETDNRKREEHGLPTKPIDENFLSALDAG 61

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +P  +G+A+G DRL+ML T A +I EVI    S++
Sbjct: 62  LPPCAGVALGIDRLLMLKTNAKHIQEVINFTVSRA 96


>gi|224418231|ref|ZP_03656237.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827556|ref|ZP_04870441.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141764|ref|ZP_07803957.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510962|gb|EES89621.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130795|gb|EFR48412.1| aspartyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 583

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 67/200 (33%), Gaps = 18/200 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            + R +   + R+ +  ++R       F+EI++  L   +P     ++            
Sbjct: 132 RNPRLQEIFITRSKVAQAVRNSLSHLGFLEIETPILTKATPEGARDYLVPSRVHHGEFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 192 LPQ------SPQLFKQLLMVSGFDKYFQIAKCFRDEDLRLDRQPEFTQIDIEMSFCEQKD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++                  +      + T  E   +Y +       + P  
Sbjct: 246 VIGVAEEVLKSIFAACG----------ISIQMPFPHYTYNEVMEKYGSDKPDLRYELPLV 295

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
               L      +    +A D
Sbjct: 296 EVGDLFIDSTNEIFATIAKD 315



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 7/109 (6%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE-MQEKKKI 298
            +P        +   +   +  +++     E+      +     Q   FE   + +K+  
Sbjct: 447 HHPFTMPKNLEVQDIEEINSVAYDVVLNGFEIGGGSIRIHKQEIQSKVFELLGISQKEAQ 506

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              +       L  L    P   GIA G DR++ML+  A++I +VI  P
Sbjct: 507 DKFS-----FLLEALQFGAPPHGGIAFGLDRIIMLLCKAHSIRDVIAFP 550


>gi|88195441|ref|YP_500245.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|123098030|sp|Q2FXU5|SYD_STAA8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|87202999|gb|ABD30809.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|329728340|gb|EGG64777.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 588

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 21/187 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+ I  S+R+Y  +  F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +++   +       +              +T  EA  RY   D   T    +
Sbjct: 249 DVMQMGEEMLKKVVKEVKGVEIN---------GAFPRMTYKEAMRRY-GSDKPDTRFEME 298

Query: 191 QPDRHLL 197
             D   L
Sbjct: 299 LIDVSQL 305



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P            
Sbjct: 410 ALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 EEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|282919404|ref|ZP_06327139.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282317214|gb|EFB47588.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
          Length = 588

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 21/187 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+ I  S+R+Y  +  F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +++   +       +              +T  EA  RY   D   T    +
Sbjct: 249 DVMQMGEEMLKKVVKEVKGVEIN---------GAFPRMTYKEAMRRY-GSDKPDTRFEME 298

Query: 191 QPDRHLL 197
             D   L
Sbjct: 299 LIDVSQL 305



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P            
Sbjct: 410 ALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 EEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|153208291|ref|ZP_01946670.1| aspartyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|120576075|gb|EAX32699.1| aspartyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
          Length = 590

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 69/211 (32%), Gaps = 22/211 (10%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTEL 66
               +   R    L  R+ I   +R +  E  F++I++  L   +P     ++    T  
Sbjct: 131 LRRPEVAQR----LKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVPSRTHP 186

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                  +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT L+   + 
Sbjct: 187 ------GQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQPEFTQLDLEMSF 240

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              + + +    +IR               +N         IT  EA   Y   D     
Sbjct: 241 VEEKDIQQLMETMIRHLFST---------FLNVPLPDPFPRITYDEAIKTY-GTDRPDLR 290

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +     D   L    +    +   ++    I
Sbjct: 291 NPLTLVDVTDLMKSVEFKVFKEPANNPHGRI 321



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
           A + +              +   E                       I       ++ ++
Sbjct: 418 ADLNLYEGQWKPVWVVDFPMFDREDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 477

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           +     E+      + D   Q    +     K+    E        L  L    P   GI
Sbjct: 478 MVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMA--EAQF--GHLLMALQFGSPPLGGI 533

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           A G DRLV ++TGA++I +VI  P +Q+ Q
Sbjct: 534 AFGLDRLVAIMTGASSIRDVISFPKTQTAQ 563


>gi|90020560|ref|YP_526387.1| aspartyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|122996443|sp|Q21MA4|SYD_SACD2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|89950160|gb|ABD80175.1| aspartyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 594

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 68/186 (36%), Gaps = 18/186 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  L  R+ + +++R Y  +N F++I++  L   +P     ++    T       
Sbjct: 132 RRDAMQQRLKFRSKVTNAIRNYLDDNDFLDIETPILTRATPEGARDYLVPSRTHDGKFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    EQ
Sbjct: 192 LPQ------SPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFMDEEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I                       E   +  AEA  +Y +      +     
Sbjct: 246 IMSVTEGMISKLFRELKGVELG----------EFPRMPYAEAMEKYGSDKPDMRIPLEMV 295

Query: 192 PDRHLL 197
             + L+
Sbjct: 296 EIKDLM 301



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 22/126 (17%)

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF--- 288
            +  T     P   SA           ++ +++     EL      + D   Q+  F   
Sbjct: 449 HHPFTAPSCSPEELSANPAT-----ALSRAYDMVLNGTELGGGSIRIHDQSMQQEVFRVL 503

Query: 289 ---EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
              E+E +EK              L  L    P   G+A G DRL+ML+TGA++I +VI 
Sbjct: 504 GIGEEEQREKFG----------FLLDALKYGAPPHGGLAFGLDRLIMLMTGASSIRDVIA 553

Query: 345 TPFSQS 350
            P +QS
Sbjct: 554 FPKTQS 559


>gi|153872335|ref|ZP_02001260.1| Aspartyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152071197|gb|EDN68738.1| Aspartyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 595

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 71/227 (31%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
           Q+      N D   R R               R  I   +R++     F+EI++  L   
Sbjct: 111 QLDESHI-NEDIRLRYRYIDLRRPEMQARFQLRAQITRLMRQFLDSEGFLEIETPMLTKA 169

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++    T         +   L  SP+   + L+ +G ++ +     +R+ +  
Sbjct: 170 TPEGARDYLVPSRTHP------GQFFALPQSPQLFKQLLMMSGMDRYYQIVRCFRDEDLR 223

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT L+   +      L     ++IR   E            N         ++ 
Sbjct: 224 ADRQPEFTQLDIEMSFIDESMLKNVMESMIRLLFEKVL---------NVELPEPFPSLSY 274

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  R+   D        +  D   L    +        +D    +
Sbjct: 275 AEAIRRF-GTDKPDLRVPLELTDIDDLMANVEFKVFAGPANDPNGRV 320



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 5/144 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           V        +    + E  E              P  +         +   ++ +++   
Sbjct: 422 VQKGWKPLWVIDYPMFEWDEKEKRWMSLHHPFTAPNIQDIEKLEAHPNQSLSRAYDMVLN 481

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +  P  Q   F     E      E        L  L    P   GIA G 
Sbjct: 482 GEEIGGGSIRIHRPEMQSAVFRILGIE----EEEAQEKFGFLLEALKYGCPPHGGIAFGL 537

Query: 327 DRLVMLVTGANNINEVIWTPFSQS 350
           DRL+ML++GAN+I EVI  P +Q+
Sbjct: 538 DRLIMLMSGANSIREVIAFPKTQT 561


>gi|15924620|ref|NP_372154.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927210|ref|NP_374743.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21283309|ref|NP_646397.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486463|ref|YP_043684.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650511|ref|YP_186524.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82751228|ref|YP_416969.1| aspartyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87160735|ref|YP_494281.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|148268110|ref|YP_001247053.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394178|ref|YP_001316853.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221744|ref|YP_001332566.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156979948|ref|YP_001442207.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509855|ref|YP_001575514.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141101|ref|ZP_03565594.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253317218|ref|ZP_04840431.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732286|ref|ZP_04866451.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733119|ref|ZP_04867284.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255006415|ref|ZP_05145016.2| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257793703|ref|ZP_05642682.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258410998|ref|ZP_05681278.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420201|ref|ZP_05683156.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438203|ref|ZP_05689487.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443666|ref|ZP_05692005.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258446873|ref|ZP_05695027.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448787|ref|ZP_05696899.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258450544|ref|ZP_05698606.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258453605|ref|ZP_05701583.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262048623|ref|ZP_06021506.1| aspartyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051280|ref|ZP_06023504.1| aspartyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269203255|ref|YP_003282524.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893134|ref|ZP_06301368.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282920179|ref|ZP_06327904.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282928265|ref|ZP_06335870.1| aspartyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|284024686|ref|ZP_06379084.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294848659|ref|ZP_06789405.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295406751|ref|ZP_06816556.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296275915|ref|ZP_06858422.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207650|ref|ZP_06924085.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245666|ref|ZP_06929531.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300911732|ref|ZP_07129175.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380773|ref|ZP_07363441.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|54039654|sp|P67015|SYD_STAAN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|54039655|sp|P67016|SYD_STAAW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|54042026|sp|P67014|SYD_STAAM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56749383|sp|Q6G8T9|SYD_STAAS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287514|sp|Q5HFD3|SYD_STAAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196899|sp|Q2FG97|SYD_STAA3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196906|sp|Q2YT75|SYD_STAAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225433|sp|A7X344|SYD_STAA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|172048921|sp|A6QHH2|SYD_STAAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082145|sp|A6U298|SYD_STAA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082146|sp|A5ITF4|SYD_STAA9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082147|sp|A8Z2F7|SYD_STAAT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13701428|dbj|BAB42722.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247402|dbj|BAB57792.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204749|dbj|BAB95445.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244906|emb|CAG43367.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284697|gb|AAW36791.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|82656759|emb|CAI81188.1| aspartyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|87126709|gb|ABD21223.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|147741179|gb|ABQ49477.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946630|gb|ABR52566.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374544|dbj|BAF67804.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722083|dbj|BAF78500.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368664|gb|ABX29635.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253724075|gb|EES92804.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728875|gb|EES97604.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257787675|gb|EEV26015.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840148|gb|EEV64612.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843912|gb|EEV68306.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848247|gb|EEV72238.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851072|gb|EEV75015.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257854448|gb|EEV77397.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858065|gb|EEV80954.1| aspartyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257861702|gb|EEV84501.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257864336|gb|EEV87086.1| aspartyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259160917|gb|EEW45937.1| aspartyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259163270|gb|EEW47829.1| aspartyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262075545|gb|ACY11518.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941115|emb|CBI49501.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282590072|gb|EFB95154.1| aspartyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594527|gb|EFB99512.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282764452|gb|EFC04578.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285817312|gb|ADC37799.1| Aspartyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294824685|gb|EFG41108.1| aspartyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968498|gb|EFG44522.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296887667|gb|EFH26565.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297177317|gb|EFH36569.1| aspartyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300885978|gb|EFK81180.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333303|gb|ADL23496.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751458|gb|ADL65635.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340710|gb|EFM06642.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312830016|emb|CBX34858.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315129914|gb|EFT85904.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315198670|gb|EFU28998.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140483|gb|EFW32337.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320144022|gb|EFW35791.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314304|gb|AEB88717.1| Aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727425|gb|EGG63881.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
 gi|329733124|gb|EGG69461.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 588

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 21/187 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+ I  S+R+Y  +  F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +++   +       +              +T  EA  RY   D   T    +
Sbjct: 249 DVMQMGEEMLKKVVKEVKGVEIN---------GAFPRMTYKEAMRRY-GSDKPDTRFEME 298

Query: 191 QPDRHLL 197
             D   L
Sbjct: 299 LIDVSQL 305



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P            
Sbjct: 410 ALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 EEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|323440817|gb|EGA98526.1| aspartyl-tRNA synthetase [Staphylococcus aureus O11]
          Length = 588

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 21/187 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+ I  S+R+Y  +  F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +++   +       +              +T  EA  RY   D   T    +
Sbjct: 249 DVMQMGEEMLKKVVKEVKGVEIN---------GAFPRMTYKEAMRRY-GSDKPDTRFEME 298

Query: 191 QPDRHLL 197
             D   L
Sbjct: 299 LIDVSQL 305



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P            
Sbjct: 410 ALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 EEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|49483875|ref|YP_041099.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|282904210|ref|ZP_06312098.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906036|ref|ZP_06313891.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908949|ref|ZP_06316767.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911266|ref|ZP_06319068.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|283958390|ref|ZP_06375841.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295428205|ref|ZP_06820837.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590827|ref|ZP_06949465.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|56749412|sp|Q6GG73|SYD_STAAR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49242004|emb|CAG40701.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|282324961|gb|EFB55271.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327213|gb|EFB57508.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331328|gb|EFB60842.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595828|gb|EFC00792.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790539|gb|EFC29356.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295128563|gb|EFG58197.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575713|gb|EFH94429.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312437903|gb|ADQ76974.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315195532|gb|EFU25919.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 588

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 21/187 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+ I  S+R+Y  +  F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +++   +       +              +T  EA  RY   D   T    +
Sbjct: 249 DVMQMGEEMLKKVVKEVKGVEIN---------GAFPRMTYKEAMRRY-GSDKPDTRFEME 298

Query: 191 QPDRHLL 197
             D   L
Sbjct: 299 LIDVSQL 305



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P            
Sbjct: 410 ALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 EEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|170769354|ref|ZP_02903807.1| aspartyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170121678|gb|EDS90609.1| aspartyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 590

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 49/152 (32%), Gaps = 30/152 (19%)

Query: 215 SDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTKR 261
                 I   K  P   I+     D               P   +A       +      
Sbjct: 414 GKDLGLIDESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-T 314
           +++     E+      + +   Q+  F      E+E +EK              L  L  
Sbjct: 474 YDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------FLLDALKY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 524 GTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|239637565|ref|ZP_04678537.1| aspartyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596783|gb|EEQ79308.1| aspartyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 588

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 66/179 (36%), Gaps = 20/179 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+    S+R+Y  +N F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQTTRSIRQYLDDNGFYDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            +M     ++R   +              +       +T +EA +RY +    T  D  
Sbjct: 249 DVMAMGEEMLRKVVKDVKG---------IDVPGPFPRMTYSEAMSRYGSDKPDTRFDME 298



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  + +            P  E         
Sbjct: 410 ALRIKLAKELGLIDESKLNFLWVTDWPLLEYDDESKRYVAAHHPFTSPKKEDIEKLDSEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + +   Q   FE     K++            L    
Sbjct: 470 ENAQANAYDIVLNGYELGGGSIRIHNGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|6573338|pdb|1C0A|A Chain A, Crystal Structure Of The E. Coli Aspartyl-Trna Synthetase
           : Trnaasp : Aspartyl-Adenylate Complex
          Length = 585

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|67900984|ref|XP_680748.1| hypothetical protein AN7479.2 [Aspergillus nidulans FGSC A4]
 gi|40742869|gb|EAA62059.1| hypothetical protein AN7479.2 [Aspergillus nidulans FGSC A4]
 gi|259483785|tpe|CBF79459.1| TPA: cytoplasmic asparaginyl-tRNA synthetase, putative
           (AFU_orthologue; AFUA_2G05650) [Aspergillus nidulans
           FGSC A4]
          Length = 574

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 96/334 (28%), Gaps = 43/334 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            +  R     + R+ F E +  E+   ++      G  T        L   D+  +  YL
Sbjct: 270 VMKVRAATLKAFRQTFDELRMTEVTPPAMVQTQVEGGST--------LFKFDYYGEDAYL 321

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + +    +FC   ++R  +     H  E+T +E       +  L+    
Sbjct: 322 TQSSQLYLETCIPS-LGDVFCVCPSFRAEKSLTRRHLSEYTHIESELDFIEFTDLLDHLE 380

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            +I    E+      +           P +   +  F R    D    L   + P+    
Sbjct: 381 AVICRVLEIVLADPVAKP---IIAQLNPGFQMPSRPFLRMKYSDAIEWLREHEIPNEE-- 435

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
                           + D  +     K+     IN    L  +PA   +      P D 
Sbjct: 436 -----------GKPHEFGDDIAEAAERKM--TDIINRPIFLTHFPAEIKAFYMKKDPEDR 482

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++    +         +D  +     E     K +  + +      D+      
Sbjct: 483 RVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMAAYKHEGMDPSPYYWYTDQR----K 533

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +     + +    P 
Sbjct: 534 YGTSPHGGYGLGLERFLAWLCARYTVRDCSLYPR 567


>gi|229543724|ref|ZP_04432784.1| aspartyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328144|gb|EEN93819.1| aspartyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 590

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 72/201 (35%), Gaps = 28/201 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R            +  R+ I  S+R +  E  FI++++  L   +P     ++ 
Sbjct: 125 DVRLKYRYLDLRRPVMFETMKMRHAITKSIRGFLDEEGFIDVETPVLTKSTPEGARDYLV 184

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT +
Sbjct: 185 PSRVHPGEFYALPQ------SPQLFKQLLMISGFDRYYQIARCFRDEDLRADRQPEFTQI 238

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S E ++     +I         K    +  N +  +    +T  EA  RY   
Sbjct: 239 DIETSFMSQEDILTMTEKMI---------KRLMKEVKNIDIETPLPRLTYEEAVNRY-GS 288

Query: 181 DLGTTLDNPDQPDRHLLYLQA 201
           D   T    +  D   +   A
Sbjct: 289 DKPDTRFGMELVDVSEIVQNA 309



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRNKLGKELGLIDESKFNFLWVTDWPLLEYDEDAGRYTAAHHPFTMPFEEDIEKLETDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                + +++     EL      +     Q   F+     K++            L    
Sbjct: 470 ASVKAQAYDIVLNGYELGGGSLRIYKRDVQEKMFKALGFSKEQ----AQSQFGFLLDAFD 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DR+VML+ G +N+ + I  P
Sbjct: 526 YGTPPHGGIALGLDRIVMLLAGRSNLRDTIAFP 558


>gi|210134820|ref|YP_002301259.1| aspartyl-tRNA synthetase [Helicobacter pylori P12]
 gi|238064681|sp|B6JLK1|SYD_HELP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|210132788|gb|ACJ07779.1| aspartyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 577

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 97/344 (28%), Gaps = 18/344 (5%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  EN  + +    LQ        T  + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDENDVMGVVEDLLQEIFKAIGHTISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
            +        Y    P+   +  L    +     ++A  +             L    A 
Sbjct: 269 RMPYKEAMENYGSDKPDLRFELPLIEVGDCFIDSSNAIFSNIAKDPKNQRIKALNVKGAD 328

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANIDLGTT 185
             + + +   +                 +      P  +       +         +G  
Sbjct: 329 ALFSRSVLKELEEFVRQFGAKGLAYLQIKEDGIKGPLVKFLSEKGLKNILEKTGAKIGDI 388

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           +      D+ ++     +  ++VA   D    D  + + +                 +P 
Sbjct: 389 V-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPF 447

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                      +      +++    +EL      +     Q+  FEK          E  
Sbjct: 448 TMPKNIECEDIEEVEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQ 503

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 L  L    P   G A+GFDRL+ML+T +N+I +VI  P
Sbjct: 504 KKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSNSIRDVIAFP 547



 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 65/219 (29%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQEIFKAIGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFIDSSNAIFSNIAKDPKNQRI 319


>gi|46577231|sp|Q83BE5|SYD_COXBU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 590

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 69/211 (32%), Gaps = 22/211 (10%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTEL 66
               +   R    L  R+ I   +R +  E  F++I++  L   +P     ++    T  
Sbjct: 131 LRRPEVAQR----LKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVPSRTHP 186

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                  +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT L+   + 
Sbjct: 187 ------GQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQPEFTQLDLEMSF 240

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              + + +    +IR               +N         IT  EA   Y   D     
Sbjct: 241 VEEKDIQQLMETMIRHLFST---------FLNVPLPDPFPRITYDEAIKTY-GTDRPDLR 290

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +     D   L    +    +   ++    I
Sbjct: 291 NPLTLVDVTDLMKSVEFKVFKEPANNPHGRI 321



 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
           A + +              +   E                       I       ++ ++
Sbjct: 418 ADLNLYEGQWKPVWVVDFPMFDREDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 477

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           +     E+      + D   Q    +     K+    E        L  L    P   GI
Sbjct: 478 MVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMA--EAQF--GHLLMALQFGSPPLGGI 533

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           A G DRLV ++TGA++I +VI  P +Q+ Q
Sbjct: 534 AFGLDRLVAIMTGASSIRDVIAFPKTQTAQ 563


>gi|223044122|ref|ZP_03614161.1| aspartyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442516|gb|EEE48622.1| aspartyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 588

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 20/179 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+    S+R+Y  +N F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQTTRSIRQYLDDNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            ++     ++R   +                      +T AEA  RY +    T  D  
Sbjct: 249 DVISMGEEMLRKVVKDVKGIDVE---------GPFPRMTYAEAMDRYGSDKPDTRFDME 298



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 50/157 (31%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRIKLAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDISKLDSEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
           +      +++     EL      + D   Q+  FE       Q K++            L
Sbjct: 470 ENVQANAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFSTEQAKEQFG--------FLL 521

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 522 DAFKYGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|212635158|ref|YP_002311683.1| aspartyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226736544|sp|B8CNX7|SYD_SHEPW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|212556642|gb|ACJ29096.1| Aspartyl-tRNA synthetase [Shewanella piezotolerans WP3]
          Length = 593

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 85/249 (34%), Gaps = 21/249 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R+ + S++R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMADRIVFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + R   +                  E   +T AEA  RY   D     +  + 
Sbjct: 246 VMAKTEEMTRGLFKELLDVDLG----------EFPRMTFAEAMRRY-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSD--IFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
            D   L  + + A      +D      + S     K+           +  Y A   A  
Sbjct: 295 IDIADLVKEVEFAVFNGPANDPEGRVAVLSIPGGAKLSRKQLDEYAKYVTIYGAKGLAWM 354

Query: 250 NIYPADPRF 258
            +   D   
Sbjct: 355 KVNDLDKGM 363



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 48/147 (32%), Gaps = 7/147 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNL--GINCCTILDRYPAPESALANIYPADPRFTK 260
           +AG               +     E     G++        P+  +            + 
Sbjct: 414 KAGEDFDLLKGDWKPLWVVDFPMFERTSDGGLHAMHHPFTAPSNMTPAELEANPTAAISD 473

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            +++     EL      + +   Q   F    +       E        L  L    P  
Sbjct: 474 AYDMVLNGCELGGGSVRIHNSEMQSAVF----RILGINDEEANEKFGFLLEALRYGTPPH 529

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
           +G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 AGLAFGLDRIIMLMTGASSIRDVMAFP 556


>gi|165919222|ref|ZP_02219308.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165917083|gb|EDR35687.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 590

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 69/211 (32%), Gaps = 22/211 (10%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTEL 66
               +   R    L  R+ I   +R +  E  F++I++  L   +P     ++    T  
Sbjct: 131 LRRPEVAQR----LKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVPSRTHP 186

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                  +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT L+   + 
Sbjct: 187 ------GQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQPEFTQLDLEMSF 240

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              + + +    +IR               +N         IT  EA   Y   D     
Sbjct: 241 VEEKDIQQLMETMIRHLFST---------FLNVPLPDPFPRITYDEAIKTY-GTDRPDLR 290

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +     D   L    +    +   ++    I
Sbjct: 291 NPLTLVDVTDLMKSVEFKVFKEPANNPHGRI 321



 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
           A + +              +   E                       I       ++ ++
Sbjct: 418 ADLNLYEGQWKPVWVVDFPMFDREDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 477

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           +     E+      + D   Q    +     K+    E        L  L    P   GI
Sbjct: 478 MVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMA--EAQF--GHLLMALQFGSPPLGGI 533

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           A G DRLV ++TGA++I +VI  P +Q+ Q
Sbjct: 534 AFGLDRLVAIMTGASSIRDVIAFPKTQTAQ 563


>gi|228475157|ref|ZP_04059883.1| aspartate--tRNA ligase [Staphylococcus hominis SK119]
 gi|314936257|ref|ZP_07843604.1| aspartate--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|228270768|gb|EEK12170.1| aspartate--tRNA ligase [Staphylococcus hominis SK119]
 gi|313654876|gb|EFS18621.1| aspartate--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 588

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 71/205 (34%), Gaps = 25/205 (12%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+    S+R+Y   N F +I++  L   +P     ++            
Sbjct: 136 RRPELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +                 +    +T  EA  RY   D   T    + 
Sbjct: 250 IIQMGEEMLSKVVKDVKGIDIQ---------TPFPRMTYDEAMKRY-GSDKPDTRFGMEL 299

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSD 216
            D   L    ++   +V  D    D
Sbjct: 300 QDVSQL---GKEMDFKVFKDTVEHD 321



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    L+E  E              P  E         
Sbjct: 410 ALRIKIAKELKLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKDEDIAKLDSEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 EKVQANAYDVVLNGYELGGGSIRISDGELQEKMFEVLGFTKEQ----ARDQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|149235760|ref|XP_001523758.1| asparaginyl-tRNA synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452737|gb|EDK46993.1| asparaginyl-tRNA synthetase [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 549

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/353 (15%), Positives = 110/353 (31%), Gaps = 51/353 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +      +R            +  R     S+R  +VE   +E+    +      G  T 
Sbjct: 225 DPSLLLDQRHLTLRGESLSAVMKVRAAFLKSIRRVYVEEGLLEVTPPCMVQTQVEGGST- 283

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEF 117
                  L   D+  +  +L  S +   +  L A    ++C   ++R  +     H  E+
Sbjct: 284 -------LFKMDYYGEEAFLTQSSQLYLETCLPA-LGDVYCVQESFRAEKSHTRRHLSEY 335

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      S++ L+K    +I    +   +   + + +       P +      F R 
Sbjct: 336 THIEAELGFLSFDDLLKHIETVIVKTVQYVLEDPVAGKLIEQLN---PGFKAPQLPFKRM 392

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
             ID              L +L  +          ++ D  +     K+     IN   +
Sbjct: 393 QYID-------------ALDWLNERGILNDEGKPFSFGDDIAEAQERKMVDT--INEPIL 437

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           L R+P    S        DPR T+  + L     E+        +  +    F+     +
Sbjct: 438 LTRFPVEIKSFYMQKCKDDPRVTESVDVLMPNVGEITGGSMRSYEYEDLLAGFK-----R 492

Query: 296 KKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +KI    Y     FL        +  G  +G +R++  +     + +    P 
Sbjct: 493 EKIDPAPYY---WFLDQRRYGTCEHGGYGLGTERILAWLCDRFTVRDCSLYPR 542


>gi|327481500|gb|AEA84810.1| aspartyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 558

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  EN F+++++  L   +P     ++ 
Sbjct: 89  ETRLRYRFIDLRRPEMAEKLKLRSRITASIRRYLDENGFLDVETPILGRPTPEGARDYLV 148

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 149 PSRTHAGNFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 202

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +      ++     +IR   +                F E  ++   EA  RY   
Sbjct: 203 DIETSFLDEADIIGITEGMIRKLFKEVLDL----------EFGEFPHMPFEEAMRRY-GS 251

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D        +  D        +        +D    +
Sbjct: 252 DKPDLRIPLELVDVADQLNAVEFKVFSGPANDPKGRV 288



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 60/185 (32%), Gaps = 14/185 (7%)

Query: 176 RYANIDLGTTLDNPDQPDR--HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG-- 231
           R   +D        D+       L     + G  +            +     E N    
Sbjct: 353 RVGAVDGDIVFFGADKAKIVSEALGALRIKLGHDLKLLTCDWAPLWVVDFPMFEENDDGS 412

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           ++        P          P+    ++ +++     EL      +     Q+  F   
Sbjct: 413 LSALHHPFTAPKCTPQELEANPS-AALSRAYDMVLNGTELGGGSIRIHRKEMQQAVF--- 468

Query: 292 MQEKKKIYNETYPIDED--FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +    +E    ++    L  L    P   G+A G DRLVML+TGA +I EVI  P +
Sbjct: 469 ---RILGIDEAEQEEKFGFLLDALKFGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKT 525

Query: 349 QSNQE 353
           QS  +
Sbjct: 526 QSAAD 530


>gi|309702090|emb|CBJ01404.1| aspartyl-tRNA synthetase [Escherichia coli ETEC H10407]
          Length = 590

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSRVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|167947573|ref|ZP_02534647.1| lysyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 94

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             +RFELY   +E+ N   EL D  EQR RFE + Q ++       P+DE  LA L   +
Sbjct: 1   MAERFELYLEGMEIANGFHELSDADEQRRRFEVDNQNRRAAGLVEPPMDEYLLAALQAGL 60

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           P  +G+A+G DRL+M V+GA  I +V+  PF ++
Sbjct: 61  PDCAGVALGIDRLLMQVSGAEQIRQVLAFPFERA 94


>gi|328773412|gb|EGF83449.1| hypothetical protein BATDEDRAFT_9285 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 571

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 104/355 (29%), Gaps = 52/355 (14%)

Query: 12  RDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIR 60
            D    +R            +  R ++    R +F      E+    +  +     + + 
Sbjct: 243 PDILLDQRHLVLRGETTSSIMRVRALMLKGFRSFFESRFITEVTPPLMVQTQVEGGSTLF 302

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTM 119
            F       ++  +  YL  S +   +  L +     +C   ++R  +     H  EFT 
Sbjct: 303 EF-------NYYEEKAYLTQSSQLYLETCLPS-IGDSYCITESFRAEKSHTRRHLSEFTH 354

Query: 120 LEWYRAHESYEQLMKDCMNIIRCA-----AEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            E   A  +++ L+    +++        A+     I    N N     +P         
Sbjct: 355 CEAELAFITFDDLLSCMEDMVVDVVGSILADPIGASIVKDLNPNFKAPKKPFRRMQYTEA 414

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            ++ N D G   D                 G  +  D  + +        ++   +G   
Sbjct: 415 IKWLN-DNGVKKDTT---------------GQVMQVDYVYGEDIPEGPERRMTDTIGE-- 456

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ- 293
             +L R+PA             R  +   L      L     E++    +     + M  
Sbjct: 457 PILLCRFPAEIKGFYMK-----RCPESLALTESVDLLMPNVGEIVGGSMRISDLAELMAG 511

Query: 294 -EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             ++ I    Y    D         +  G  +G +RL+  +    ++ EV   P 
Sbjct: 512 YSREGIDPSPYYWFTD--QRKYGTCEHGGFGLGVERLLAWLLDRFSVREVCLYPR 564


>gi|73945457|ref|XP_857814.1| PREDICTED: similar to Asparaginyl-tRNA synthetase, cytoplasmic
           (Asparagine--tRNA ligase) (AsnRS) isoform 2 [Canis
           familiaris]
          Length = 563

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/340 (15%), Positives = 108/340 (31%), Gaps = 52/340 (15%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEI----------DSMSLQYSPGNETHIRAFSTELIIQD 70
            L  R+++    R++F +  + E+           +       G  T        L   D
Sbjct: 256 ILKARSVVTRCFRDHFFDRGYYEVSVYPSSFANVQT----QVEGGAT--------LFKLD 303

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +  +  +L  S +   +  + A    +FC A ++R  +     H  E+T +E      ++
Sbjct: 304 YFGEEAFLTQSSQLYLETCIPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTF 362

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E+L+    +++    +   +        + NP  +P                    ++  
Sbjct: 363 EELLNRLEDLVCDVVDRVLKSPAGSIVRDLNPNFKPPKRPF-------------KRMNYS 409

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SAL 248
           D       +   ++ G      +   +   R++         IN   +L R+P    S  
Sbjct: 410 DAIVWLKEHNIKKEDGTFYEFGEDIPEAPERLM------TDSINEPILLCRFPVEIKSFY 463

Query: 249 ANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
               P D R T+  + L     E+      + D  E    ++     ++ I    Y    
Sbjct: 464 MQRCPEDSRLTESVDVLMPNVGEIVGGSMRIWDSEEILAGYK-----REGIDPTPYYWYT 518

Query: 308 DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           D            G  +G +R +  +    +I +V   P 
Sbjct: 519 D--QRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPR 556


>gi|152976820|ref|YP_001376337.1| aspartyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189082085|sp|A7GT84|SYD_BACCN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|152025572|gb|ABS23342.1| aspartyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 589

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 68/190 (35%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMYNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +       S              +T A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDVKGVEIS---------VPFPRMTYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 13/150 (8%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +   +   +  +    L+E  E              P  E         +    + 
Sbjct: 416 KELELIDENKFNFLWVTDWPLLEYDEEANRYFAAHHPFTMPFREDVELLETAPEKARAQA 475

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-EM 316
           ++L     EL      + +   Q   F+     + + +++            L       
Sbjct: 476 YDLVLNGYELGGGSLRIYERDVQEKMFKALGFTQEEAREQFG--------FLLEAFEYGT 527

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 528 PPHGGIALGLDRLVMLLAGRTNLRDTIAFP 557


>gi|226945722|ref|YP_002800795.1| aspartyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511851|sp|C1DRG2|SYD_AZOVD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226720649|gb|ACO79820.1| aspartyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 591

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 75/217 (34%), Gaps = 29/217 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I SS+R Y  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAAKLKLRSSITSSIRRYLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHAGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +      +M    N+IR   +                F E  ++T  EA  RY   
Sbjct: 236 DIETSFLDEADIMGITENMIRKLFKEVLD----------VEFGELPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D        +  D        +        +D    +
Sbjct: 285 DKPDLRIPLELVDVADQLKAVEFKVFSGPANDPKGRV 321



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 58/182 (31%), Gaps = 14/182 (7%)

Query: 176 RYANIDLGTTLDNPDQPDR--HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG-- 231
           R   +D        D+       L     + G  +            +     E N    
Sbjct: 386 RVGAVDGDIVFFGADKAKIVSEALGALRIRLGHDLKLLTCEWAPLWVVDFPMFEENDDGS 445

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           ++        P          PA    ++ +++     EL      +     Q+  F   
Sbjct: 446 LSALHHPFTAPKCTPEELAANPAVA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF--- 501

Query: 292 MQEKKKIYNET--YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +    +E          L  L    P   G+A G DRLVML+TGA++I EVI  P +
Sbjct: 502 ---RILGIDEAEQQEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGASSIREVIAFPKT 558

Query: 349 QS 350
           QS
Sbjct: 559 QS 560


>gi|161830701|ref|YP_001597402.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189082094|sp|A9N999|SYD_COXBR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|161762568|gb|ABX78210.1| aspartyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 590

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 69/211 (32%), Gaps = 22/211 (10%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTEL 66
               +   R    L  R+ I   +R +  E  F++I++  L   +P     ++    T  
Sbjct: 131 LRRPEVAQR----LKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLVPSRTHP 186

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                  +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT L+   + 
Sbjct: 187 ------GQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQPEFTQLDLEMSF 240

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              + + +    +IR               +N         IT  EA   Y   D     
Sbjct: 241 VEEKDIQQLMETMIRHLFST---------FLNVPLPDPFPRITYDEAIKTY-GTDRPDLR 290

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +     D   L    +    +   ++    I
Sbjct: 291 NPLTLVDVTDLMKSVEFKVFKEPANNPHGRI 321



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 48/150 (32%), Gaps = 5/150 (3%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
           A + +              +   E                       I       ++ ++
Sbjct: 418 ADLNLYEGQWKPVWVVDFPMFDREDVGDWQALHHPFTALQETDPEKVIANPGDVLSRAYD 477

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           +     E+      + D   Q   F+     K+    E        L  L    P   GI
Sbjct: 478 MVLNGSEIGGGSIRINDIGMQYAVFKVLGISKEMA--EAQF--GHLLMALQFGSPPLGGI 533

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           A G DRLV ++TGA++I +VI  P +Q+ Q
Sbjct: 534 AFGLDRLVAIMTGASSIRDVIAFPKTQTAQ 563


>gi|108563023|ref|YP_627339.1| aspartyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123246989|sp|Q1CTQ7|SYD_HELPH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|107836796|gb|ABF84665.1| aspartyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 577

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 96/344 (27%), Gaps = 18/344 (5%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  EN  + +    LQ        T  + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDENDVMGVVEDLLQAIFKAVGHTISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
            +        Y    P+   +  L    +     ++A  +             L    A 
Sbjct: 269 RMPYKEAMENYGSDKPDLRFELPLIEVGDCFRDSSNAIFSNIAKDPKNKRIKALNVKGAD 328

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANIDLGTT 185
             + + +   +                 +      P  +       +          G  
Sbjct: 329 AVFSRSVLKELEEFVRQFGAQGLAYLQIKEDGIKGPLVKFLSEKGLKNILEKTGAQTGDI 388

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           +      D+ ++     +  ++VA   D    D  + + +                 +P 
Sbjct: 389 V-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPF 447

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                      +      +++    +EL      +     Q+  FEK          E  
Sbjct: 448 TMPKNIECEDIEEVEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQ 503

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 L  L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 504 KKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSIRDVIAFP 547



 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 65/219 (29%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQAIFKAVGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFRDSSNAIFSNIAKDPKNKRI 319


>gi|284921786|emb|CBG34859.1| aspartyl-tRNA synthetase [Escherichia coli 042]
          Length = 590

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      ++    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANNPKGRV 318



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|82776452|ref|YP_402801.1| aspartyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|97196873|sp|Q32H95|SYD_SHIDS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|81240600|gb|ABB61310.1| aspartate tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 590

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDLKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|307823991|ref|ZP_07654218.1| aspartyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307734775|gb|EFO05625.1| aspartyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 596

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 70/220 (31%), Gaps = 28/220 (12%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   R R            +  R  +   LR +  +N+F EI++  L   +P     +
Sbjct: 119 NEELRLRYRYIDLRRTVMQEKMKVRRDVTRVLRNFLDDNEFFEIETPYLTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           I    T       + +      SP+   + L+ AG ++ +     +R+ +     QPEFT
Sbjct: 179 IVPSRTHENSFFALPQ------SPQLYKQMLMVAGMDRYYQVVRCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   +     ++M     +IR                      +   +T  EA +RY 
Sbjct: 233 QLDIETSFMDENEIMHIMEEMIRQLFIKVIGVNLG---------DKFPRMTHQEAVSRY- 282

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +D        +  D                 +D    + 
Sbjct: 283 GVDRPDLRIPLELVDIAEDMKDVDFKVFSAPANDPKGRVV 322



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 50/141 (35%), Gaps = 6/141 (4%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           D     +    + +  E +   N        P+  S    +       ++ ++L     E
Sbjct: 426 DWKPVWVIDFPMFDWDEKSQRWNAIHHPFTAPSC-SVEELVANPGAALSRAYDLVLNGTE 484

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q+   E          +E        L  L    P   G+A G DRL
Sbjct: 485 VGGGSIRINRTSMQQTVLEILGI----GEDEAREKFGFLLDALKYGAPPHGGLAFGLDRL 540

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           VML+TG+ +I +VI  P +QS
Sbjct: 541 VMLMTGSTSIRDVIAFPKTQS 561


>gi|169829345|ref|YP_001699503.1| aspartyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|238688193|sp|B1HV71|SYD_LYSSC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|168993833|gb|ACA41373.1| Aspartyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 589

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 23/226 (10%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R               R+ +  ++R +     F+E+++  L   +P     ++ 
Sbjct: 123 DLRLKYRYLDLRRPVMFDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLV 182

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ AG EK F  A  +R+ +     QPEFT +
Sbjct: 183 PSRVHEGEFYALPQ------SPQLFKQLLMVAGFEKYFQIARCFRDEDLRADRQPEFTQV 236

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E++++    +I+   +                    +     +   R+   
Sbjct: 237 DIETSFLTQEEVLEMNERLIQAVMKEVKGIDIPAPFQRMKYQEAMDRYGSDKPDVRFGLE 296

Query: 181 -----DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
                D+          D      Q +   I+ A D         +
Sbjct: 297 LVALNDVFEGCGFKVFADTVAQGKQVKSINIKGAADKYSRKDMDEL 342



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 40/131 (30%), Gaps = 5/131 (3%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           I    L E  E +            P  E              + +++     EL     
Sbjct: 430 ITDWPLFEYSEEDGRYYAAHHPFTRPFDEDIPLMDTDPSAVRAQAYDIVLNGYELGGGSL 489

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
            + +   Q   FE           E        L      +P  +G+A G DR VML+ G
Sbjct: 490 RIYERDLQEKMFE----LLGFSEEEAQAQFGFLLEAFEYGVPPHAGLAFGLDRFVMLLAG 545

Query: 336 ANNINEVIWTP 346
            +N+ + I  P
Sbjct: 546 RHNLRDTIAFP 556


>gi|242373929|ref|ZP_04819503.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348483|gb|EES40085.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 588

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 66/179 (36%), Gaps = 20/179 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+    S+R+Y  +N F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQTTRSIRQYLDDNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            ++     ++R   +              +  +    +T AEA  RY +    T  D  
Sbjct: 249 DVISMGEEMLRKVVKDVKG---------IDVPAPFPRMTYAEAMDRYGSDKPDTRFDME 298



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 48/153 (31%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRIKLAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDIAKLDSEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + +   Q+  FE      ++            L    
Sbjct: 470 ENAQANAYDIVLNGYELGGGSIRIHNGELQQKMFEVLGFSAEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|149375108|ref|ZP_01892880.1| aspartyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149360472|gb|EDM48924.1| aspartyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 601

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + S +R +   N F+++++  L   +P     ++    T       
Sbjct: 132 RRPEMLNRLRFRSRVTSYIRNFLDSNGFMDVETPILTRATPEGARDYLVPSRTHEGSFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 192 LPQ------SPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQIDIEASFIDEEA 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           LM    N+IR   +   +              E   +  AEA  RY   D        + 
Sbjct: 246 LMTLNENMIRSLFKDVLE----------VDLPEFPRMPYAEAMQRY-GSDKPDLRIPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 295 VDVGDLVAGVDFKVFAGPANDPKGRV 320



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 5/93 (5%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
           ++ +++     EL      + D   Q   F     E    + E        L  L    P
Sbjct: 471 SRAYDMVLNGTELGGGSIRIHDEKMQESVFRTLGIE----HEEARAKFGFLLDALKYGCP 526

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              G+A G DRL+ML+TGA++I +VI  P +QS
Sbjct: 527 PHGGLAFGLDRLIMLMTGASSIRDVIAFPKTQS 559


>gi|332799389|ref|YP_004460888.1| aspartyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697124|gb|AEE91581.1| aspartyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 590

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I  ++R++  EN F+E+++  L   +P     ++            
Sbjct: 137 RRPSMQYNMIFRSKINKAIRDFLDENGFVEVETPVLTKSTPEGARDYLVPSRLNPGKFYA 196

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   +    + 
Sbjct: 197 LPQ------SPQLFKQILMVAGMDRYYQIARCFRDEDLRADRQPEFTQLDIEMSFVDVDD 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I+   E                      +T  +A  +Y   D   T    + 
Sbjct: 251 IISLNEKLIKYVVEKVTGIKVE---------IPFARMTYEQAMEKY-GSDKPDTRFGMEM 300

Query: 192 PD 193
            D
Sbjct: 301 VD 302



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 5/152 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A+   +   +   +  I    L+E  E              P  E              
Sbjct: 417 LAKALNLIDKNKLNFLWITEFPLLEYNEEEKRFVAKHHPFTSPMEEDIPLLDKEPSRVRA 476

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           K +++     EL      + D   Q   FE     K++     +      L       P 
Sbjct: 477 KAYDIVLNGTELGGGSIRIHDAALQEKMFETLGFSKER----AWNNFGFLLKAFEYGTPP 532

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             GIA G DR++ML+ G ++I + I  P +Q+
Sbjct: 533 HGGIAYGLDRMIMLLLGLDSIRDCIAFPKTQN 564


>gi|309789262|ref|ZP_07683855.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308923016|gb|EFP68530.1| aspartyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 573

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 92  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 151

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 152 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 205

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 206 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 255

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 256 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDLKGRV 301



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 391 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 449

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 450 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 499

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 500 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 538


>gi|319400956|gb|EFV89175.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 588

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 72/201 (35%), Gaps = 24/201 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+    S+R+Y   N F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++    +++R   +       S              +T AEA  RY   D   T    +
Sbjct: 249 DIIAMGEDMLRKVVKDVKGIDVS---------GPFPRMTYAEAMDRY-GSDKPDTRFGME 298

Query: 191 QPDRHLLYLQAQQAGIRVAHD 211
             +   L    ++   +V  D
Sbjct: 299 LINVSQL---GKEMNFKVFKD 316



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRIKLAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q+  FE           +        L    
Sbjct: 470 ENVQANAYDIVLNGYELGGGSIRIHDGELQQKMFEVLG----FTNEQAQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|242242902|ref|ZP_04797347.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233617|gb|EES35929.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 588

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 72/201 (35%), Gaps = 24/201 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+    S+R+Y   N F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++    +++R   +       S              +T AEA  RY   D   T    +
Sbjct: 249 DIIAMGEDMLRKVVKDVKGIDVS---------GPFPRMTYAEAMDRY-GSDKPDTRFGME 298

Query: 191 QPDRHLLYLQAQQAGIRVAHD 211
             +   L    ++   +V  D
Sbjct: 299 LINVSQL---GKEMNFKVFKD 316



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRIKLAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q+  FE           +        L    
Sbjct: 470 ENVQANAYDIVLNGYELGGGSIRIHDGELQQKMFEVLG----FTNEQAQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|320188567|gb|EFW63229.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|326342246|gb|EGD66027.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
          Length = 577

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 96  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 155

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 156 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 209

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 210 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 259

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 260 AEAERRY-GSDKPDLRNPMELTDVADLLRSVEFAVFAGPANDPKGRV 305



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 395 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 453

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 454 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 503

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 504 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 542


>gi|193666902|ref|XP_001951757.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic-like
           [Acyrthosiphon pisum]
          Length = 560

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/332 (14%), Positives = 105/332 (31%), Gaps = 40/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            LL R+++  + R + ++   IE+   +L      G  T        L   D+  +  YL
Sbjct: 257 ILLMRSVVTQAFRMHNLDKGCIEVVPPTLVQTQVEGGST--------LFKLDYFGQEAYL 308

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E   A  +++ L+    
Sbjct: 309 TQSSQLYLETCLPA-LGDVFCMAQSYRAEQSRTRRHLSEYTHVEAEFAFITFDDLLDRIE 367

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           ++I    +   +                   +      +  N +         + D  + 
Sbjct: 368 DMICDVVKRVLE-------------------SPHADIVKQLNPEFAAPKRPFKRMDYKMA 408

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++  I    +  +        + + +    IN   +L R+PA   S   +  P D 
Sbjct: 409 IQFLRENNITKEDNSFYEFGEDIPEMAERKMTDLINQPIMLCRFPAEIKSFYMSRCPEDN 468

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
             T+  ++    +         +   ++          KK   +        +       
Sbjct: 469 TLTESVDVLLPGVGEIVGGSMRI--WDEEELL---AGYKKVGIDPKPYY--WYTDQRKFG 521

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +G +R +  +    +I EV   P 
Sbjct: 522 SCPHGGYGLGLERFLCWLLNRYHIREVCLYPR 553


>gi|237750881|ref|ZP_04581361.1| aspartyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373326|gb|EEO23717.1| aspartyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 588

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 71/219 (32%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R  I S  R +   + F+E+++  L   +P     +
Sbjct: 117 NEELRLKYRYLDLRSQKSLDIFKLRAKIASVTRNFLESHGFLEVETPILTKATPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G E+ +  A  +R+ +     QPEF+
Sbjct: 177 LVPSRVHDGSFYALPQ------SPQLFKQLLMMSGFERYYQIAKCFRDEDLRADRQPEFS 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +    + +M+   ++I    +   +              +  ++   +A   Y 
Sbjct: 231 QIDVEMSFCEEKDVMQIAEDLILEIFKACGKS----------ISYKIPHLDYMDAMECYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       D P      L           +A D   + I
Sbjct: 281 SDKPDLRFDMPLVEVADLFVSSNNDIFKEIALDTKANRI 319



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 5/108 (4%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P       +    +   +  +++    +EL      +     Q   F+     K+   
Sbjct: 455 HHPFTMPKNIDESDIESIQSIAYDIVLNGVELGGGSIRIHKSEIQSKIFDLLQISKE--- 511

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L  L    P   G A+GFDRLVML++GA +I EVI  P
Sbjct: 512 -EANEKFGFLLEALQYGTPPHGGFAIGFDRLVMLLSGATSIREVIAFP 558


>gi|218439984|ref|YP_002378313.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226736531|sp|B7KB89|SYD_CYAP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218172712|gb|ACK71445.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 595

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 78/201 (38%), Gaps = 22/201 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R R  L  R+ +  ++R Y   +  F+E+++  L   +P     ++    T      
Sbjct: 136 RRDRMRKNLQLRHQVVQAMRRYLEDQQNFMEVETPILTRSTPEGARDYLVPSRTNPGKWY 195

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S++
Sbjct: 196 ALPQ------SPQLFKQLLMVSGVDRYYQIARCFRDEDNRADRQPEFTQLDMEMSFMSFD 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++     +I    +            N +       +T AEA  +Y  ID   T    +
Sbjct: 250 EILDLNEGLIAHVFKTV---------KNIDIPRPFPRLTYAEAMEKY-GIDRPDTRFGLE 299

Query: 191 QPDRHLLYLQAQQAGIRVAHD 211
             D   +    + +G +V   
Sbjct: 300 LVD---VSEIVKDSGFKVFSG 317



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 42/146 (28%), Gaps = 9/146 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+          +    + E       +         P PE      +         
Sbjct: 424 EKLGLIDEDKINLLWVTDFPMFEWNAEEKRLEALHHPFTAPKPEDINDLPHAR----ALA 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           +++    IEL      +     Q   F       +    E Y      L       P   
Sbjct: 480 YDMIFNGIELGGGSLRIYQRDIQEKVFSTIGLSME----EAYNKFGFLLEAFEYGTPPHG 535

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DR VML+    +I +VI  P
Sbjct: 536 GIAYGLDRFVMLLAKEESIRDVIAFP 561


>gi|15831830|ref|NP_310603.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168762340|ref|ZP_02787347.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|217328834|ref|ZP_03444915.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|22257054|sp|Q8XCI7|SYD_ECO57 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13362044|dbj|BAB35999.1| aspartate tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|189367330|gb|EDU85746.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|209767420|gb|ACI82022.1| aspartate tRNA synthetase [Escherichia coli]
 gi|217318181|gb|EEC26608.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
          Length = 590

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLRSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|312912895|dbj|BAJ36869.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
          Length = 590

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 62/187 (33%), Gaps = 19/187 (10%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +     R  L        + +  +D W+ ++       
Sbjct: 382 ERTGAQDGDMIFFGADNNKVVADALGALRLKL-----GKDLSLTDEDKWAPLWVIDFPMF 436

Query: 226 IEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +    G+         P   +A       +      +++     E+      + +   Q
Sbjct: 437 EDDGEGGLTAMHHPFTAPRDMTASELKTAPEGAVANAYDMVINGYEVGGGSVRIHNGEMQ 496

Query: 285 RHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
           +  F      E ++++K            L  L    P  +G+A G DRL ML+TG +NI
Sbjct: 497 QTVFGILGINEQEQREKFG--------FLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNI 548

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 549 RDVIAFP 555


>gi|16765243|ref|NP_460858.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167994202|ref|ZP_02575294.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|22257058|sp|Q8ZNV2|SYD_SALTY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|16420437|gb|AAL20817.1| aspartate tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205327868|gb|EDZ14632.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261247071|emb|CBG24892.1| AspRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993884|gb|ACY88769.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158421|emb|CBW17930.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|321224545|gb|EFX49608.1| Aspartyl-tRNA synthetase ; unambiguous [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323130185|gb|ADX17615.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332988794|gb|AEF07777.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 590

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 62/187 (33%), Gaps = 19/187 (10%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +     R  L        + +  +D W+ ++       
Sbjct: 382 ERTGAQDGDMIFFGADNNKVVADALGALRLKL-----GKDLSLTDEDKWAPLWVIDFPMF 436

Query: 226 IEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +    G+         P   +A       +      +++     E+      + +   Q
Sbjct: 437 EDDGEGGLTAMHHPFTAPRDMTASELKTAPEGAVANAYDMVINGYEVGGGSVRIHNGEMQ 496

Query: 285 RHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
           +  F      E ++++K            L  L    P  +G+A G DRL ML+TG +NI
Sbjct: 497 QTVFGILGINEQEQREKFG--------FLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNI 548

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 549 RDVIAFP 555


>gi|302389915|ref|YP_003825736.1| aspartyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200543|gb|ADL08113.1| aspartyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 591

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 86/235 (36%), Gaps = 20/235 (8%)

Query: 6   SQPWWNRDFHYR-RRPFLL----KRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
            +    +  +   RRP +L     R+ +  ++R++  EN FIE+++  L   +P      
Sbjct: 125 DESLRLKYRYLDLRRPSMLHNMTFRHKVNKAIRDFLDENGFIEVETPMLTRSTPEGA--- 181

Query: 60  RAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           R F     +        Y L  SP+   + L+ AG E+ +     +R+ +     QPEFT
Sbjct: 182 RDFLVPSRLN---PGTFYALPQSPQLFKQILMVAGMERYYQITRCFRDEDLRADRQPEFT 238

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   +    + ++     +++   E    +               E     +   R+ 
Sbjct: 239 QLDIEMSFVDVDDVISLNEKLVKYVVEKTTGRTVEIPFRRITYRDAMEIYGSDKPDTRF- 297

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAG------IRVAHDDTWSDIFSRILIEKIE 227
            +++    D  ++ +  +    A+  G      I+ + +         ++ +  E
Sbjct: 298 GLEMVDVTDIAEKTEFKVFSEAAKSGGKVKGINIKNSAEQFSRRQIDELVEKAKE 352



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 5/150 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +Q  +   +   +  +    L+E  E              P  E              K 
Sbjct: 420 RQLNLIDKNKLNFLWVVEFPLLEWDEEEKRYVAMHHPFTSPMDEDLDLLEEDPGRVRAKA 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           ++L     EL      +     Q   F+     K++     +      L       P   
Sbjct: 480 YDLVLNGTELGGGSIRIHRTEIQERMFKVLGFTKER----AWNNFGFLLRAFEYGTPPHG 535

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           GIA G DR+VML+ G N+I + I  P +Q+
Sbjct: 536 GIAYGLDRMVMLLLGLNSIRDCIAFPKTQN 565


>gi|297841895|ref|XP_002888829.1| hypothetical protein ARALYDRAFT_894970 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334670|gb|EFH65088.1| hypothetical protein ARALYDRAFT_894970 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 432

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 69/273 (25%), Gaps = 17/273 (6%)

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKD 135
           +L  S +   +    A    ++ F   +R        H  EF M+E   A       M  
Sbjct: 168 FLDGSGQLQVETYACA-LSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADIHDDMNC 226

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               ++       +      +                   R   +   +           
Sbjct: 227 AEAYVKYMCNWLIKNCSDDMDFMDKNVD-------GGCTKRLKMVAETSFKRVTYTEAIE 279

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPA 254
           +L     +  +   +        +      +          I+  YP    A        
Sbjct: 280 VLEKAVAEGKVVFDNKVERKMDLASEHERYLTEVEYDQKPIIVYNYPKEIKAFYMRLNDD 339

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           +        L     EL             R R E+    +  I    + +D        
Sbjct: 340 EKTVAAMDVLVPKVGELIGGSQREERYDVIRQRIEE---MRLPIEPYEWYLDLR----RY 392

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +  G  +GF+R++   TG +NI +VI  P 
Sbjct: 393 GTVKHCGFGLGFERMIQFATGIDNIRDVIPFPR 425


>gi|168234037|ref|ZP_02659095.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194469841|ref|ZP_03075825.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197249743|ref|YP_002146121.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|238690038|sp|B5F3I9|SYD_SALA4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194456205|gb|EDX45044.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197213446|gb|ACH50843.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205331971|gb|EDZ18735.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 590

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  E+ F++I++  L   
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDEHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S    +K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|326343796|gb|EGD67558.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 577

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 96  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 155

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 156 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 209

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 210 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 259

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 260 AEAERRY-GSDKPDLRNPMELTDVADLLRSVEFAVFAGPANDPKGRV 305



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 395 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 453

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 454 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 503

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 504 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 542


>gi|168747893|ref|ZP_02772915.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168757900|ref|ZP_02782907.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168770849|ref|ZP_02795856.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168776587|ref|ZP_02801594.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168783166|ref|ZP_02808173.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168789731|ref|ZP_02814738.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168801898|ref|ZP_02826905.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208810475|ref|ZP_03252351.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208816661|ref|ZP_03257781.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208819532|ref|ZP_03259852.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209396974|ref|YP_002270949.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|254793490|ref|YP_003078327.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261227633|ref|ZP_05941914.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258201|ref|ZP_05950734.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291283048|ref|YP_003499866.1| Aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|238064706|sp|B5YR11|SYD_ECO5E RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|187768045|gb|EDU31889.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188017525|gb|EDU55647.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|188999463|gb|EDU68449.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189355183|gb|EDU73602.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189360301|gb|EDU78720.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189370643|gb|EDU89059.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189376046|gb|EDU94462.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208724991|gb|EDZ74698.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208731004|gb|EDZ79693.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208739655|gb|EDZ87337.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209158374|gb|ACI35807.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209767418|gb|ACI82021.1| aspartate tRNA synthetase [Escherichia coli]
 gi|209767422|gb|ACI82023.1| aspartate tRNA synthetase [Escherichia coli]
 gi|209767424|gb|ACI82024.1| aspartate tRNA synthetase [Escherichia coli]
 gi|209767426|gb|ACI82025.1| aspartate tRNA synthetase [Escherichia coli]
 gi|254592890|gb|ACT72251.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290762921|gb|ADD56882.1| Aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320641720|gb|EFX11108.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320647080|gb|EFX15913.1| aspartyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652363|gb|EFX20661.1| aspartyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320658537|gb|EFX26231.1| aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668435|gb|EFX35262.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
          Length = 590

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLRSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|200390299|ref|ZP_03216910.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|199602744|gb|EDZ01290.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
          Length = 590

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S    +K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEGAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|197263101|ref|ZP_03163175.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197241356|gb|EDY23976.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 590

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S    +K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|146306300|ref|YP_001186765.1| aspartyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166225377|sp|A4XRR7|SYD_PSEMY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145574501|gb|ABP84033.1| aspartate--tRNA(Asn) ligase [Pseudomonas mendocina ymp]
          Length = 591

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 73/203 (35%), Gaps = 28/203 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I SS+R Y  +N F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLKLRSRITSSIRRYLDDNGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHAGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + +M     ++R   +                F E  ++ +AEA  R+ + 
Sbjct: 236 DIETSFLDEKDIMDITETMVRNLFKEVLG----------VEFGELPHMPLAEAMRRFGSD 285

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQ 203
                +          L     +
Sbjct: 286 KPDLRIPLELVDVEDQLKDVEFK 308



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 61/188 (32%), Gaps = 26/188 (13%)

Query: 176 RYANIDLGTTLDNPDQPDR--HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           R   +D        D+       L     + G  +            +     E N   +
Sbjct: 386 RVGAVDGDIVFFGADKAKIVSEALGALRIKLGHDLNLLTCEWAPLWVVDFPMFEEN--DD 443

Query: 234 CCTILDRYPAPESALANIYPADPR----FTKRFELYACNIELCNACDELLDPIEQRHRF- 288
                  +P   S        +       ++ +++     EL      + D   Q+  F 
Sbjct: 444 GSLTAMHHP-FTSPKCTPEDLEANPAAALSRAYDMVLNGTELGGGSIRIHDKAMQQTVFR 502

Query: 289 -----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
                E E QEK              L  L    P   G+A G DRLVML+TGA++I EV
Sbjct: 503 VLGISEDEQQEKFG----------FLLDALKYGAPPHGGLAFGLDRLVMLMTGASSIREV 552

Query: 343 IWTPFSQS 350
           I  P +QS
Sbjct: 553 IAFPKTQS 560


>gi|78214099|ref|YP_382878.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|97196976|sp|Q3AGF9|SYD_SYNSC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78198558|gb|ABB36323.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 609

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 68/207 (32%), Gaps = 21/207 (10%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +      R    L  R     + R +  +  FIE+++  L   +P     ++     
Sbjct: 129 RHRYLDLRRKRMNDNLRLRAQTIQAARRFLEDAGFIEVETPVLTRSTPEGARDYLLPSRV 188

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                    +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 189 ------CGGEWFALPQSPQLFKQLLMVGGIERYYQMARCFRDEDLRADRQPEFTQLDIEM 242

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    EQ+++   ++I    +                      IT  +A   Y   D   
Sbjct: 243 SFMDQEQILELNESLICAIWKTVKG---------IELPRPFPRITWHDAMEHY-GTDRPD 292

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHD 211
           T    +  +   +    +  G +V   
Sbjct: 293 TRYGMELTN---VSDIVKDMGFKVFSG 316



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 13/156 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-------IY 252
            A++ G+  A  D     F  ++   +    G         +P       +         
Sbjct: 421 LAKELGMVKADRDNDQWNFLWVVDFPMFEFNGDENRYEALHHPFCAPNAEDLGGDASKWS 480

Query: 253 PADPR-FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              P    + ++L    +EL      + D   QR   +      +    E        + 
Sbjct: 481 ETLPGARAQAYDLVLNGLELGGGSLRIHDSTLQRQVLQTVGLTLE----EAQEQFGFLMD 536

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DR+VML+ G  +I + I  P
Sbjct: 537 ALDVGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFP 572


>gi|253744599|gb|EET00785.1| Asparaginyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 548

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 103/349 (29%), Gaps = 35/349 (10%)

Query: 12  RDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
            D   R R            L  R  I  + R +F    + E+   ++  +   E     
Sbjct: 215 PDARARERHLIHRGEHGSAILKARGRILRAFRNHFYFKGWTEVTPPTIVNT-ECEGGSSL 273

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
           F  +        +  YL  S +   + +++A    ++C   ++R  +     H  EFT L
Sbjct: 274 FKVDF-----YGEDAYLTQSSQLYLESVISA-LGDVYCILPSYRAEKSNTRRHLSEFTHL 327

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E      ++  L+    + +             +  +        + I            
Sbjct: 328 ETEHPFITFSDLLGIIEDFVISVVTELKNDKQFYPLIQFLNGDNFDKIASNLK------- 380

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                + + +  D    +   ++ G    +DD   +   R +I+ I           L  
Sbjct: 381 KPFKRMRHSEGIDWLNAHGITKEDGTAFGYDDDIPEAQERKMIDTIGE------PVFLTH 434

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +PA   +      +D   +    L      L     E++    ++  +E   +       
Sbjct: 435 FPAHLKSFYMTRCSDDPSSPDHLLTESVDLLVPTVGEIVGGSMRKWTYEDTYKAFLDAGM 494

Query: 301 ETYPIDEDFLAC--LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                   +L        P   G+ +G +R +  + G   + + +  P 
Sbjct: 495 PIERY-YWYLDTRKFGGCP-HGGMGLGLERFICWLLGIYTVRDTVLYPR 541


>gi|170596103|ref|XP_001902642.1| Asparaginyl-tRNA synthetase [Brugia malayi]
 gi|158589572|gb|EDP28510.1| Asparaginyl-tRNA synthetase, putative [Brugia malayi]
          Length = 444

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 112/343 (32%), Gaps = 41/343 (11%)

Query: 15  HYRRRPF-----LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R +       L  R+ +    R +F +  F  +D+  L ++       I  F  +   
Sbjct: 126 HLRMKSIPFMCLLRLRSRLDQLSRSFFQKELFFHVDTPLLTHNDCEGAGDI--FIVQADK 183

Query: 69  QDHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH 126
           Q++   + +YL  S +   +  +     K++  A A R        H  EF MLE   A 
Sbjct: 184 QNYFGDQAVYLPVSSQLHLESFV-GSLSKVYTIAPALRADHSQTRQHLAEFRMLEAEYAF 242

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
                 ++   +++          + S+         +      AE       +      
Sbjct: 243 AD---DLEQLCDLVERYVNYVIDGMLSYDVKEIKSMMQVFCSGNAE-------VQSLLWT 292

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           +   +P   + Y +A    ++   +      FS+     +  +        + RYP  + 
Sbjct: 293 NGSRKPFLRIQYDEAAAI-LQSKGEMIPGGRFSKENELTMVKHCA--GPLFVLRYPYTQK 349

Query: 247 ALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                   +  + + F+L A  + EL        D  E R R   +             +
Sbjct: 350 PFYMKRYGN--YAECFDLLAPFVGELAGGSLREPDAEELRRRGCDDS------------L 395

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           D  +L       P S+G  +G +R +  + G  NI + +  P 
Sbjct: 396 DW-YLEIRQHGHPPSAGFGIGLERFMQALFGILNIKDTVAFPR 437


>gi|146283147|ref|YP_001173300.1| aspartyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145571352|gb|ABP80458.1| aspartyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 604

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  EN F+++++  L   +P     ++ 
Sbjct: 135 ETRLRYRFIDLRRPEMAEKLKLRSRITASIRRYLDENGFLDVETPILGRPTPEGARDYLV 194

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 195 PSRTHAGNFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 248

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +      ++     +IR   +                F E  ++   EA  RY   
Sbjct: 249 DIETSFLDEADIIGITEGMIRKLFKEVLDL----------EFGEFPHMPFEEAMRRY-GS 297

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D        +  D        +        +D    +
Sbjct: 298 DKPDLRIPLELVDVADQLNAVEFKVFSGPANDPKGRV 334



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 10/121 (8%)

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
                 P          P+    ++ +++     EL      +     Q+  F      +
Sbjct: 463 HHPFTAPKCTPQELEANPS-AALSRAYDMVLNGTELGGGSIRIHRKEMQQAVF------R 515

Query: 296 KKIYNETYPIDED--FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
               +E    ++    L  L    P   G+A G DRLVML+TGA +I EVI  P +QS  
Sbjct: 516 ILGIDEAEQEEKFGFLLDALKFGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAA 575

Query: 353 E 353
           +
Sbjct: 576 D 576


>gi|326622932|gb|EGE29277.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 577

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 96  PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 155

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 156 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 209

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 210 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 259

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 260 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 305



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S    +K  P   I+     D               P   +A       +     
Sbjct: 400 LGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVAN 459

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 460 AYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 511

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 512 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 542


>gi|313893155|ref|ZP_07826732.1| aspartate--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442508|gb|EFR60923.1| aspartate--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 601

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +  ++R++F    F+EI++  L   +P     ++            
Sbjct: 140 RRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYLVPSRVNAGTFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 200 LPQ------SPQIFKQILMVAGYEKYFQIARCFRDEDLRADRQPEFTQLDLEMSFVDEED 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    + A  K  +              IT  EA  +Y +       D    
Sbjct: 254 IYSMLEEMVAHVFKTALGKEIT---------LPMPRITWDEAMDKYGSDKPDLRFDMAFT 304

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
               L+     +    V  +
Sbjct: 305 DVTDLVKDTEFKVFRSVIDN 324



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 47/160 (29%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       ++ +    + E  E              P            
Sbjct: 414 ELRLEMARRMNMIDPDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++    +E+      +     Q   F+      +    E        L    
Sbjct: 474 GSVKAIAYDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIE----EARSKFGFMLDAFQ 529

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P  +G A G DRLVML+    +I +VI  P +QS  +
Sbjct: 530 YGAPPHAGCAFGLDRLVMLMAKRQSIRDVIAFPKTQSASD 569


>gi|229828383|ref|ZP_04454452.1| hypothetical protein GCWU000342_00444 [Shuttleworthia satelles DSM
           14600]
 gi|229792977|gb|EEP29091.1| hypothetical protein GCWU000342_00444 [Shuttleworthia satelles DSM
           14600]
          Length = 602

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ + + +R+Y  E+ F+EI++  LQ  +P     ++            
Sbjct: 141 RRPEMQKNLILRSQVTNLIRKYMAEDGFLEIETPMLQKSTPEGARDYLVPSRVHPGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQLFKQLLMVSGFDRYFQIARCFRDEDLRADRQPEFTQVDLEMSFVDMED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++R     A                    +T  EA  R+   D   T    + 
Sbjct: 255 VLETTSRLLRNVFRDAIGVEIP---------DPIPRMTWQEAMERF-GSDKPDTRFGMEL 304

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 305 IDVSDVVADC 314



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 14/140 (10%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-----FTKRFELYACNIELC 272
           F  ++              +   +P       ++   +        +K +++    +EL 
Sbjct: 434 FLWVVDFPAFEWSDEQNRFLAMHHPFTMPYEEDLDKLESGDLSSIRSKAYDIVLNGVELG 493

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRL 329
                +     Q   F      K   +   E        L      +P  +G+A G DR+
Sbjct: 494 GGSIRIHQDDIQERMF------KALGFSLEEARDRFGFLLTAFEYGVPPHAGLAFGLDRM 547

Query: 330 VMLVTGANNINEVIWTPFSQ 349
           +ML+T A++I +VI  P  +
Sbjct: 548 IMLMTSADSIRDVIAFPKVK 567


>gi|168241530|ref|ZP_02666462.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168462567|ref|ZP_02696498.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168820725|ref|ZP_02832725.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194448833|ref|YP_002045954.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|198243936|ref|YP_002215184.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204931081|ref|ZP_03221907.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205352393|ref|YP_002226194.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856578|ref|YP_002243229.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238690368|sp|B5FSN0|SYD_SALDC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690442|sp|B5R1V2|SYD_SALEP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690485|sp|B5R8D6|SYD_SALG2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238693638|sp|B4T7Z9|SYD_SALHS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194407137|gb|ACF67356.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|195633952|gb|EDX52304.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197938452|gb|ACH75785.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|204320125|gb|EDZ05330.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205272174|emb|CAR37032.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205339452|gb|EDZ26216.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205342579|gb|EDZ29343.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|206708381|emb|CAR32685.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|320085481|emb|CBY95262.1| Aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|326627445|gb|EGE33788.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 590

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S    +K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|16760851|ref|NP_456468.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141457|ref|NP_804799.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213162636|ref|ZP_03348346.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213417350|ref|ZP_03350492.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
 gi|213426398|ref|ZP_03359148.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|289824028|ref|ZP_06543626.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|22257056|sp|Q8Z5W1|SYD_SALTI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|25293065|pir||AI0743 aspartate-tRNA ligase (EC 6.1.1.12) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16503148|emb|CAD05652.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137084|gb|AAO68648.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 590

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 49/151 (32%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S    +K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHVGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|161613543|ref|YP_001587508.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167552463|ref|ZP_02346216.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168238531|ref|ZP_02663589.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168259824|ref|ZP_02681797.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|194442789|ref|YP_002041166.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194735477|ref|YP_002114936.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|238912039|ref|ZP_04655876.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|189082139|sp|A9MUB9|SYD_SALPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238689770|sp|B4TYS4|SYD_SALSV RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238693528|sp|B4SVF1|SYD_SALNS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|161362907|gb|ABX66675.1| hypothetical protein SPAB_01263 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401452|gb|ACF61674.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194710979|gb|ACF90200.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197288631|gb|EDY28006.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|205322921|gb|EDZ10760.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205351266|gb|EDZ37897.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|322616901|gb|EFY13809.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618139|gb|EFY15031.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625810|gb|EFY22629.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626262|gb|EFY23072.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632676|gb|EFY29421.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322639020|gb|EFY35713.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640460|gb|EFY37113.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644225|gb|EFY40770.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649547|gb|EFY45979.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655455|gb|EFY51763.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660234|gb|EFY56472.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662915|gb|EFY59122.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668100|gb|EFY64259.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674140|gb|EFY70234.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675506|gb|EFY71580.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683080|gb|EFY79096.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686774|gb|EFY82752.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195335|gb|EFZ80515.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199227|gb|EFZ84322.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204048|gb|EFZ89063.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207483|gb|EFZ92431.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323217467|gb|EGA02186.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221958|gb|EGA06348.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224432|gb|EGA08720.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231489|gb|EGA15602.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235931|gb|EGA20010.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240501|gb|EGA24544.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245393|gb|EGA29393.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247813|gb|EGA31751.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253612|gb|EGA37440.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323255041|gb|EGA38829.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323260274|gb|EGA43895.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266865|gb|EGA50351.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269071|gb|EGA52527.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 590

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S    +K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|23099474|ref|NP_692940.1| aspartyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|46577266|sp|Q8EPS0|SYD_OCEIH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|22777703|dbj|BAC13975.1| aspartyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 591

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 66/189 (34%), Gaps = 27/189 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R               R+    S+R Y  +  F+E+++  L   +P     ++ 
Sbjct: 123 DVRLKYRYLDLRRNSLQETFRLRHQTTQSIRNYLNDKDFLEMETPILTKSTPEGARDYLV 182

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + ++  G E+ +  A  +R+ +     QPEFT +
Sbjct: 183 PSRVHPGEFYALPQ------SPQLFKQLIMMGGFERYYQIARCFRDEDLRADRQPEFTQI 236

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++M    ++++   +            + +       +   EA  RY + 
Sbjct: 237 DIETSFLTSDEIMDMTEHMMKKVMKEV---------KDIDISLPLPRMPYQEAMDRYGSD 287

Query: 181 DLGTTLDNP 189
              T  D  
Sbjct: 288 KPDTRFDLE 296



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 16/151 (10%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDR-YPAPESALANIYPADPR--FTKRFELYAC 267
           D++            +E + G+         + +      +    DP       ++L   
Sbjct: 421 DESKFHFLWVTDWPLLEYDEGLGRYFAAHHPFTSAIEEDLDKLETDPASVRANAYDLVLN 480

Query: 268 NIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
             EL      +    +Q   F+     E + + +            L  L    P   GI
Sbjct: 481 GFELGGGSIRIHQKEQQDQMFKVLGFSEEEARSQFG--------FLLDALEYGAPPHGGI 532

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           A+G DR++ML+ G +N+ + I  P + S  +
Sbjct: 533 ALGLDRIIMLLAGRSNLRDTILFPKTASASD 563


>gi|170594375|ref|XP_001901939.1| 60K filarial antigen - nematode [Brugia malayi]
 gi|158590883|gb|EDP29498.1| 60K filarial antigen - nematode, putative [Brugia malayi]
          Length = 491

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 105/319 (32%), Gaps = 38/319 (11%)

Query: 32  LREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
           +RE+F    ++E+   +L      G         + L   D+  +  +L  S +   +  
Sbjct: 201 MREHFYNAGYVEVAPPTLVQTQVEGG--------SPLFNLDYFGEQSFLTQSSQLYLETC 252

Query: 90  LAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ 149
           +      +FC A A     +   H  E+  +E      + + LM+    ++    +    
Sbjct: 253 IP-TLGDVFCIAQA--EKSRTRRHLAEYAHVEAECPFITLDDLMEKIEELVCDTVDRLLA 309

Query: 150 KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
              + + +  +   + +          Y +                + +LQ         
Sbjct: 310 DEEAKKLLK-HINPKFQRPKRPFLRMEYKD---------------AIKWLQEHNVQNEFG 353

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP-ADPRFTKRFELYACN 268
           +  ++ +  +      +     IN   +L+R+P+   A        D   T+  +L    
Sbjct: 354 NSFSYGEDIAEAAERFMTDT--INKSILLNRFPSEIKAFYMQKDAHDNTLTESVDLLMPG 411

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDR 328
           +       E++    +  +F++  +  K +  +  P        L       G  +G +R
Sbjct: 412 V------GEIVGGSMRVWKFDELSKAFKNVEIDPKPYYWYLDQRLYGTCPHGGYGLGLER 465

Query: 329 LVMLVTGANNINEVIWTPF 347
            +  +T  N+I +V + P 
Sbjct: 466 FICWLTNTNHIRDVCFYPR 484


>gi|320657964|gb|EFX25726.1| aspartyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
          Length = 590

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLRSVEFAVFAGPANDPKGRV 318



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|15802279|ref|NP_288303.1| aspartyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|12515925|gb|AAG56856.1|AE005409_1 aspartate tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
          Length = 590

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKXRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLRSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 408 ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 467 ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 516

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|195160946|ref|XP_002021332.1| GL25269 [Drosophila persimilis]
 gi|194118445|gb|EDW40488.1| GL25269 [Drosophila persimilis]
          Length = 397

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/352 (14%), Positives = 110/352 (31%), Gaps = 57/352 (16%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
             D     R  +++          R+++  + R+++ +  + E+   +L      G  T 
Sbjct: 81  LPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRDHYFDRGYNEVTPPTLVQTQVEGGST- 139

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L       +  +L  S +   +  L A    +F  A ++R  +     H  E+
Sbjct: 140 -------LFKMQFFGEEAFLTQSSQLYLETCLPA-LGDVFTIAQSYRAEQSRTRRHLAEY 191

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      SY+ L+    +++    +   +  +    +  NP  +P            
Sbjct: 192 THVEAECPFISYDDLLDRLEDLVCDVVDRVLKSPYGHLVMELNPDFKPPKKPFRRMDYAK 251

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
            N+                                 + +        K+     IN   +
Sbjct: 252 NNVTKDDGTFYE------------------------FGEDIPEAPERKMTDT--INEPIL 285

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEK 295
           L R+P    S   +  P D R T+  ++   N+ E+      + D  E  + ++     +
Sbjct: 286 LCRFPVAIKSFYMSRCPEDKRLTESVDVMLPNVGEIVGGSMRIWDSEELLNGYK-----R 340

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + I    Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 341 EGIDPTPYYWYTD--QRIYGTIPHGGCGLGLERFLFWLLNRYHIREVCLYPR 390


>gi|56413180|ref|YP_150255.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362106|ref|YP_002141743.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|62287526|sp|Q5PMZ6|SYD_SALPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690744|sp|B5BH54|SYD_SALPK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56127437|gb|AAV76943.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197093583|emb|CAR59046.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 590

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S    +K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|295399337|ref|ZP_06809319.1| aspartyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978803|gb|EFG54399.1| aspartyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 591

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 72/188 (38%), Gaps = 22/188 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     L  R+ +  ++R++     F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFRTLQLRHRVTKAVRDFLDGEGFLEVETPILTKSTPEGARDYLVPSRVHPGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ +  A  +R+ +     QPEFT ++   +  S E 
Sbjct: 195 LPQ------SPQVFKQLLMVAGFERYYQIARCFRDEDLRADRQPEFTQIDIETSFMSQED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    ++    +VA     S              ++  EA +RY   D   T    + 
Sbjct: 249 IMQLTERMMAHVMKVAKGIEVS---------LPFPRMSYDEAMSRY-GSDKPDTRFGLEL 298

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 299 VDVSEIVK 306



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 48/157 (30%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +       +  I    L+E  E +            P  E         
Sbjct: 409 ALRLKLGKDLNLIDETKFNFLWIIDWPLLEYDEEDGRYYAAHHPFTMPVREDLPQLETSP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +    + ++L     EL      + +   Q   F      E + +K+            L
Sbjct: 469 EKVRAQAYDLVLNGYELGGGSMRIFERDVQEKMFRALGFTEEEARKQFG--------FLL 520

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 521 EAFEYGTPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 557


>gi|220903296|ref|YP_002478608.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867595|gb|ACL47930.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 627

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 67/186 (36%), Gaps = 18/186 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R +  L  R+ +   +R +  E+ F+E+++  L   +P      R F     +    
Sbjct: 162 RRPRMQDNLRLRHKVAQCIRRHLDEDGFVEVETPVLTKSTPEG---ARDFLVPSRLN--- 215

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 216 TGEFYALPQSPQLFKQLLMVAGMDRYFQIVRCFRDEDLRADRQPEFTQVDIEMSFADEET 275

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++         K  S              +   EA ARY  +D   T    + 
Sbjct: 276 VMGMAEKLMARVFRDVMGKELS---------LPFPRMPWDEAMARY-GVDKPDTRFGLEL 325

Query: 192 PDRHLL 197
            D   +
Sbjct: 326 VDITEI 331



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 15/153 (9%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A    +   +   +  +    L E  E       C      PAP               
Sbjct: 436 LADHMNLIPENTFNFLWVTDFPLYEYDEEEKRYVACHHPFTSPAPGHMELMTSDPARARA 495

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEK-----EMQEKKKIYNETYPIDEDFLACLT 314
           + +++     E+      +     QR  FE      E  E +             +  L 
Sbjct: 496 RAYDMVLNGSEVGGGSIRIHSGEVQRRMFEALGFTPEQAESQFG---------FLIQALE 546

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DRL+ML+ GA++I +VI  P
Sbjct: 547 HGAPPHGGLAFGLDRLIMLLAGASSIRDVIAFP 579


>gi|124024643|ref|YP_001018950.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166225374|sp|A2CDX5|SYD_PROM3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123964929|gb|ABM79685.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 606

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 69/207 (33%), Gaps = 21/207 (10%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +         R    L  R+    + R +  +  FIE+++  L   +P     ++     
Sbjct: 129 RHRHLDLRRERMSRNLQLRHTTIKTARRFLEDEGFIEVETPVLTRSTPEGARDYLVPSRV 188

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                    +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 189 ------CSGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQPEFTQLDIEM 242

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    EQ++K    +I    +              +       +T  EA  RY   D   
Sbjct: 243 SFMDQEQILKLNERLIATIWKAVKG---------IDLPLPFPRLTWHEAMDRY-GTDRPD 292

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHD 211
           T    +  D   +    +  G +V   
Sbjct: 293 TRYGMELND---VSDILKDMGFKVFSG 316



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 60/179 (33%), Gaps = 19/179 (10%)

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +  +   ++   +LG    + D      L+         +  ++   +          + 
Sbjct: 412 SALDRVRQFLGRELGLIPTDQDNKLWQFLW-VVDFPMFELNAEENRLEALHHPFCAPNKD 470

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +LG +    ++R P                 + ++L    +EL      + +   QR   
Sbjct: 471 DLGNDPDAWMERLPQA-------------RAQAYDLVLNGLELGGGSLRIHNAELQRQVL 517

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +      +    E        +  L    P   G+A G DR+VML+TG ++I + I  P
Sbjct: 518 QTIGLPLE----EANQQFGFLIDALEMGAPPHGGLAFGMDRIVMLLTGEDSIRDTIAFP 572


>gi|283832736|ref|ZP_06352477.1| aspartate--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291072419|gb|EFE10528.1| aspartate--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 590

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRNLWLEVKGVDLG----------DFPIMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLVKGVEFAVFSGPANDPKGRV 318



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 49/151 (32%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                +     K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLNITDESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPEDAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|283770704|ref|ZP_06343596.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460851|gb|EFC07941.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 588

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 21/187 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+ I  S+R+Y  E  F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQITRSIRQYLDEEGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +++   +       +              +T  EA  R+   D   T    +
Sbjct: 249 DVMQMGEEMLKKVVKEVKGVEIN---------GAFPRMTYKEAMRRF-GSDKPDTRFEME 298

Query: 191 QPDRHLL 197
             D   L
Sbjct: 299 LIDVSQL 305



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P            
Sbjct: 410 ALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 EEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|282916898|ref|ZP_06324656.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282319385|gb|EFB49737.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
          Length = 588

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 21/187 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+ I  S+R+Y  E  F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQITRSIRQYLDEEGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +++   +       +              +T  EA  R+   D   T    +
Sbjct: 249 DVMQMGEEMLKKVVKEVKDVEIN---------GAFPRMTYKEAMRRF-GSDKPDTRFEME 298

Query: 191 QPDRHLL 197
             D   L
Sbjct: 299 LIDVSQL 305



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P            
Sbjct: 410 ALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 EEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|42783531|ref|NP_980778.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|62287576|sp|Q730D1|SYD_BACC1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|42739460|gb|AAS43386.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 591

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +T A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEIS---------APFPRMTYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 45/151 (29%), Gaps = 13/151 (8%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRF 258
           + G  +   D     F  +    +              +P       ++       +   
Sbjct: 413 RLGKELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKAR 472

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-E 315
            + ++L     EL      + +   Q   F      K   +   E        L      
Sbjct: 473 AQAYDLVLNGYELGGGSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYG 526

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 527 TPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 557


>gi|288934601|ref|YP_003438660.1| aspartyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|290508802|ref|ZP_06548173.1| aspartyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|288889310|gb|ADC57628.1| aspartyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|289778196|gb|EFD86193.1| aspartyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 595

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREIMEAMVRQLWLEIKGVDLG----------DFPIMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 48/151 (31%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S     K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTANELKAAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      +     Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHRGDMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|161502985|ref|YP_001570097.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189082138|sp|A9MND2|SYD_SALAR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160864332|gb|ABX20955.1| hypothetical protein SARI_01047 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 590

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDANHINTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKDVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S    +K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKAAPENAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|312110103|ref|YP_003988419.1| aspartyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311215204|gb|ADP73808.1| aspartyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 591

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 22/188 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     L  R+ +  ++R++     F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFRTLQLRHRVTKAVRDFLDGEGFLEVETPILTKSTPEGARDYLVPSRVHPGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ +  A  +R+ +     QPEFT ++   +  S E 
Sbjct: 195 LPQ------SPQVFKQLLMVAGFERYYQIARCFRDEDLRADRQPEFTQIDIETSFMSQED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    ++    +VA                    ++  EA +RY   D   T    + 
Sbjct: 249 IMQLTERMMAHVMKVAKG---------IEVSLPFPRMSYDEAMSRY-GSDKPDTRFGLEL 298

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 299 VDVSEIVK 306



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 48/157 (30%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +       +  I    L+E  E +            P  E         
Sbjct: 409 ALRLKLGKDLNLIDETKFNFLWIIDWPLLEYDEEDGRYYAAHHPFTMPVREDLPQLETSP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +    + ++L     EL      + +   Q   F      E + +K+            L
Sbjct: 469 EKVRAQAYDLVLNGYELGGGSMRIFERDVQEKMFRALGFTEEEARKQFG--------FLL 520

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 521 EAFEYGTPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 557


>gi|229198529|ref|ZP_04325233.1| Aspartyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228585032|gb|EEK43146.1| Aspartyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 591

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +T A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEIS---------APFPRMTYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|237731903|ref|ZP_04562384.1| aspartyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226907442|gb|EEH93360.1| aspartyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 590

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRNLWLEVKGVDLG----------DFPIMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLVKDVEFAVFSGPANDAKGRV 318



 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 49/151 (32%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                +     K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLNITDEAKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPKDMTAAELKAAPEDAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|159109388|ref|XP_001704959.1| Asparaginyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157433035|gb|EDO77285.1| Asparaginyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 548

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/354 (13%), Positives = 103/354 (29%), Gaps = 45/354 (12%)

Query: 12  RDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
            D   R R            L  R  I  + R +F    + E+   ++  +   E     
Sbjct: 215 PDARARERHLIHRGEHGSAILKARGRILRAFRNHFYFKGWTEVTPPTIVNT-ECEGGSSL 273

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
           F  +        +  YL  S +   + +++A    ++C   ++R  +     H  EFT L
Sbjct: 274 FKVDF-----YGEDAYLTQSSQLYLESVISA-LGDVYCILPSFRAEKSNTRRHLSEFTHL 327

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI-----TVAEAFA 175
           E      ++ +L+    + +             +  V        + I        +   
Sbjct: 328 ETEHPFITFSELLGIIEDFVISVVTELKNDKQFYPLVQFLNGDNFDKIASSLKKPFKRMR 387

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
               ID                    ++ G    +DD   +   R +I+ I         
Sbjct: 388 HSEGIDWLNDHGIT------------KEDGTAFTYDDDIPEAQERKMIDAIGE------P 429

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
             L  +PA   +      +D   +  + L      L     E++    ++  +E   +  
Sbjct: 430 VFLTHFPAHLKSFYMARCSDDPSSPDYLLTESVDLLVPTVGEIVGGSMRKWTYEDTYKAC 489

Query: 296 KKIYNETYPIDEDFLAC--LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                        +L        P   G+ +G +R +  + G   + + +  P 
Sbjct: 490 VDAGLPIKRY-YWYLDSRKFGGCP-HGGMGLGLERFICWLLGIYTVRDTVLYPR 541


>gi|206976035|ref|ZP_03236945.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961892|ref|YP_002340462.1| aspartyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097846|ref|YP_002531903.1| aspartyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229141140|ref|ZP_04269681.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|226736377|sp|B7HQG0|SYD_BACC7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781716|sp|B9IYX5|SYD_BACCQ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|206745787|gb|EDZ57184.1| aspartyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067278|gb|ACJ81528.1| aspartyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241904|gb|ACM14614.1| aspartyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228642303|gb|EEK98593.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 591

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +T A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEIS---------APFPRMTYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|257425754|ref|ZP_05602178.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428414|ref|ZP_05604812.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431052|ref|ZP_05607431.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433738|ref|ZP_05610096.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436653|ref|ZP_05612697.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282914435|ref|ZP_06322221.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282924728|ref|ZP_06332396.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|293503508|ref|ZP_06667355.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510526|ref|ZP_06669232.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293531067|ref|ZP_06671749.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|257271448|gb|EEV03594.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275255|gb|EEV06742.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278255|gb|EEV08897.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281831|gb|EEV11968.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284004|gb|EEV14127.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282313563|gb|EFB43958.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282321616|gb|EFB51941.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|290920335|gb|EFD97401.1| aspartate--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095174|gb|EFE25439.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466890|gb|EFF09410.1| aspartyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
          Length = 588

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 21/187 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR         R+ I  S+R+Y  +  F +I++  L   +P     ++           
Sbjct: 135 LRRHELAQTFKMRHQITRSIRQYLDDEGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +++   +       +              +T  EA  RY   D   T    +
Sbjct: 249 DVMQMGEEMLKKVVKEVKGVEIN---------GAFPRMTYKEAMRRY-GSDKPDTRFEME 298

Query: 191 QPDRHLL 197
             D   L
Sbjct: 299 LIDVSQL 305



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P            
Sbjct: 410 ALRVKLAKELGLIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEADIAKLGTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q   FE     K++            L    
Sbjct: 470 EEAEANAYDIVLNGYELGGGSIRIHDGELQEKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|293333828|ref|NP_001168737.1| hypothetical protein LOC100382529 [Zea mays]
 gi|223972717|gb|ACN30546.1| unknown [Zea mays]
          Length = 676

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 19/183 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              + +  L  R+ +   +R Y   E++F+EI++  L   +P     ++     +     
Sbjct: 221 RRPQMQSNLRLRHNVVKLIRRYLEDEHEFVEIETPVLSKSTPEGARDYLVPSRVQPGTFY 280

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G EK +  A  +R+ +     QPEFT L+   A  S E
Sbjct: 281 ALPQ------SPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQPEFTQLDMEVAFTSME 334

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++K   +++R   +            +    +    +T AEA  RY   D      + +
Sbjct: 335 DMLKLNEDLMRHVFQAVG---------DIKLPNPFPRLTYAEAMDRY-GTDRPDLRFDWE 384

Query: 191 QPD 193
             D
Sbjct: 385 LKD 387



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 15/121 (12%)

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-- 289
                    +P       ++          +++    +E+      +     Q+  FE  
Sbjct: 534 DEQRYEALHHPFTAPNPEDMDDLPSARALAYDMIYNGVEIGGGSLRIYKSDVQQRIFEII 593

Query: 290 ----KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               ++ +EK     E + +           P   GIA G DRLVML+ G ++I +VI  
Sbjct: 594 GISPEQAEEKFGYLLECFDM---------GAPPHGGIAYGLDRLVMLLAGESSIRDVIAF 644

Query: 346 P 346
           P
Sbjct: 645 P 645


>gi|195429240|ref|XP_002062671.1| GK19574 [Drosophila willistoni]
 gi|194158756|gb|EDW73657.1| GK19574 [Drosophila willistoni]
          Length = 459

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 103/358 (28%), Gaps = 51/358 (14%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
             H R R       +  R+  Q  + +Y  E +F++I++  L  +          F  + 
Sbjct: 123 HLHLRSRIDYFAAQMRLRHKAQKIIHDYMDELEFVQINTPLLTTNDCEGAGE--VFRVQP 180

Query: 67  IIQD---------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
             +D               +    ++L  S +    + ++ G    +  A A+R      
Sbjct: 181 DSEDLLKQMSRPNVPLDQSYFDHKVFLTVSGQLHL-EAMSYGLGNTYTMAPAFRAENSKS 239

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
            LH  EF M E          +    +  +    E   +   +          +    + 
Sbjct: 240 PLHLAEFYMFEAEL-------VHLKHLEELSGFIEKMLKTTTNRLIETSGQDLQFCQASA 292

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
                   ++   +        D  L  L   +              F++     +  + 
Sbjct: 293 DAKQ----DLPWLSVPWPVLTYDEALDTLIKHKESFTTPISQNEG--FTKEQELFLVAHC 346

Query: 231 GINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                  +  +P  +         ++P+     +L    +          D + +     
Sbjct: 347 --KAPIFVIDWPVQQKPFYMKVSESNPQRVHALDLLMPTVGELCGGSLREDDVSRLSS-H 403

Query: 290 KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++ +    Y E        L        + G  MGF+R + L+TG  NI +VI  P 
Sbjct: 404 PQLPKDLAWYVE--------LRKFGG-VPTGGFGMGFERYLQLLTGVKNIRDVIPFPR 452


>gi|213969182|ref|ZP_03397321.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|213926180|gb|EEB59736.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 590

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  EN F+++++  L   +P     ++ 
Sbjct: 121 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 181 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F +  ++T  EA  RY   
Sbjct: 235 DIETSFLNEEDIIGLTEKMVRQLFKEVLD----------VEFGDFPHMTFEEAMRRY-GS 283

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D        +        +D    +
Sbjct: 284 DKPDLRNPLELVDVADQLNAVEFKVFSGPANDPKGRV 320



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 52/162 (32%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N     +        P          
Sbjct: 406 EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFSALHHPFTAPKCTPEELEAN 465

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 466 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 520

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 521 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 562


>gi|224583594|ref|YP_002637392.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|254781749|sp|C0Q2E8|SYD_SALPC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|224468121|gb|ACN45951.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322714954|gb|EFZ06525.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 590

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTALQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S    +K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|56963342|ref|YP_175073.1| aspartyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|62287530|sp|Q5WHP3|SYD_BACSK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56909585|dbj|BAD64112.1| aspartyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 589

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 63/188 (33%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+ I  S+R++   + ++EI++  L   +P     ++            
Sbjct: 134 RRPDMQEAFAMRHKIMKSVRDFLDADGYLEIETPMLTKSTPEGARDYLVPSRVHHGQFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G EK F     +R+ +     QPEFT ++   +    E 
Sbjct: 194 LPQ------SPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQPEFTQIDIETSFLDTED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +  +                   +T  EA  RY +    T       
Sbjct: 248 ILAMTEAMMEKLLKETHGLELK---------RPFSRMTYEEAMNRYGSDKPDTRFGMELI 298

Query: 192 PDRHLLYL 199
               +L  
Sbjct: 299 ELSDVLKD 306



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 6/134 (4%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           ++    +    +       R  A +  L   +P   R  + ++L     EL      + +
Sbjct: 435 LVEYDEQAKRFVALHHPFTRPKAEDLDLMETHPEQVR-AEAYDLVLNGFELGGGSQRIYE 493

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
              Q   F+      +    E        L       P   GIA+G DR+VML+   +N+
Sbjct: 494 RELQEKMFKLLGFSSEAAKEE----FGFLLEAFDYGTPPHGGIALGLDRIVMLLARKSNL 549

Query: 340 NEVIWTPFSQSNQE 353
            EVI  P + S  +
Sbjct: 550 REVIAFPKTASASD 563


>gi|159904361|ref|YP_001551705.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687134|sp|A9BDD8|SYD_PROM4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|159889537|gb|ABX09751.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 606

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 18/189 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +      R +  L  R+    + R +  E  FIE+++  L   +P     ++     
Sbjct: 129 KHRYLDLRRERMKKNLHLRHATIQTARNFLEEEGFIEVETPILTRSTPEGARDYLVPSRV 188

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                    +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 189 ------CEGEWFALPQSPQIFKQLLMVGGIERYYQVARCFRDEDLRSDRQPEFTQLDMEM 242

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +  S E+++     +I C  +    K                 ++  E+  RY   D   
Sbjct: 243 SFMSQEEILCLNERLIACIWKKIKGKDIK---------VPFPRLSWQESMDRY-GTDRPD 292

Query: 185 TLDNPDQPD 193
           T    +  D
Sbjct: 293 TRYGMELVD 301



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 9/145 (6%)

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRF 262
           +      +  +    +    +              P  +    +             + +
Sbjct: 432 KSKDQWNFLWVIDFPMFNFNKDEKRHEAMHHPFCAPNAKDIGGDPGLWEENLPKARAQAY 491

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
           +L    +EL      + +P  Q+   E     K    +E        L  L    P   G
Sbjct: 492 DLVLNGLELGGGSLRIHNPELQQKVLETIGIAK----DEATEQFGFLLNALEMGAPPHGG 547

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           +A G DR+VML++  ++I + I  P
Sbjct: 548 LAFGLDRIVMLLSEEDSIRDTIAFP 572


>gi|330502216|ref|YP_004379085.1| aspartyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328916502|gb|AEB57333.1| aspartyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 590

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 73/203 (35%), Gaps = 28/203 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I SS+R Y  +N F+++++  L   +P     ++ 
Sbjct: 121 ETRLRYRFIDLRRPEMAEKLKLRSRITSSIRRYLDDNGFLDVETPILTRATPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 181 PSRTHAGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + +M     ++R   +                F    ++T+AEA  R+ + 
Sbjct: 235 DIETSFLDEKDIMDITETMVRNLFKEVLG----------VEFGALPHMTLAEAMRRFGSD 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQ 203
                +          L     +
Sbjct: 285 KPDLRIPLELVDVEDQLKDVEFK 307



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 62/187 (33%), Gaps = 24/187 (12%)

Query: 176 RYANIDLGTTLDNPDQPDR--HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
           R   +D        D+       L     + G  +            +     E N   +
Sbjct: 385 RVGAVDGDIVFFGADKAKIVSEALGALRIKLGHDLNLLTCEWAPLWVVDFPMFEEN--DD 442

Query: 234 CCTILDRYP-APESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF-- 288
                  +P    S       A+P     + +++     EL      + D   Q+  F  
Sbjct: 443 GSLTAMHHPFTSPSCSPEELEANPAAALSRAYDMVLNGTELGGGSIRIHDKAMQQTVFRV 502

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
               E+E QEK              L  L    P   G+A G DRLVML+TGA +I EVI
Sbjct: 503 LGISEEEQQEKFG----------FLLDALKYGAPPHGGLAFGLDRLVMLMTGAQSIREVI 552

Query: 344 WTPFSQS 350
             P +QS
Sbjct: 553 AFPKTQS 559


>gi|307138530|ref|ZP_07497886.1| aspartyl-tRNA synthetase [Escherichia coli H736]
 gi|331642481|ref|ZP_08343616.1| aspartate--tRNA ligase [Escherichia coli H736]
 gi|331039279|gb|EGI11499.1| aspartate--tRNA ligase [Escherichia coli H736]
          Length = 377

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRV 318


>gi|283782453|ref|YP_003373208.1| aspartyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283440906|gb|ADB19348.1| aspartyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 591

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 80/206 (38%), Gaps = 23/206 (11%)

Query: 4   IPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET 57
           +P +    +  +   R       L+ R+ I  ++R+YF ENQFI++++  L   +P    
Sbjct: 119 LPGEDLRLKYRYLDLRRSEMQKTLVLRSSIIKAMRDYFEENQFIDVETPILGRSTPEGAR 178

Query: 58  -HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            ++            + +      SP+   + L+ AG ++    A  +R+ +     QPE
Sbjct: 179 DYLVPSRVHNGSFYALPQ------SPQLYKQILMVAGYDRYVQVARCFRDEDLRADRQPE 232

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT L+   +  ++E +M     ++         K  + Q +N +       +T  EA  R
Sbjct: 233 FTQLDLEMSFVTHEDVMSMIDGLM---------KKLAKQFLNIDLQLPLPRMTWDEAMER 283

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQ 202
           +   D        +  D   L  +  
Sbjct: 284 F-GHDAPDLRYGCELIDCTDLAAKCD 308



 Score = 96.6 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 59/182 (32%), Gaps = 17/182 (9%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D+   + +        L+   ++ G+ +   D  +  FS ++   +          +   
Sbjct: 391 DIMFFVADTWAVSCKALHNLRKKIGVDLKLYDPKTMNFSWVVEFPMFEYDAEEKRWVSMH 450

Query: 241 YP----APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF----EKEM 292
           +P     P+                ++L     E       + D   Q+  F      E 
Sbjct: 451 HPFTAPRPQDLHMLDSDPAKSRAVAYDLVINGSEAGGGTIRIHDWQVQQKVFGLLGIDEE 510

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
             K +            L  L    P   GIA+G DR+VML    ++I EVI  P +Q  
Sbjct: 511 TAKNRFG--------FLLEALQFGAPPHGGIALGIDRVVMLFGALDSIREVIAFPKTQKA 562

Query: 352 QE 353
            +
Sbjct: 563 AD 564


>gi|206581095|ref|YP_002237743.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|238064670|sp|B5XQ00|SYD_KLEP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|206570153|gb|ACI11929.1| aspartyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 595

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 77/229 (33%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKIRAKITSFVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREIMEAMVRQLWLEIKGVDLG----------DFPIMTF 272

Query: 171 AEAFARYAN--IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY +   DL   ++  D  D       A  AG         + +
Sbjct: 273 AEAERRYGSDKPDLRNPIELVDVADLLKSVEFAVFAGPANDPKGRVAAL 321



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 48/151 (31%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S     K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTADELKAAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      +     Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHRGDMQQTVFGILGINEHEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|261340251|ref|ZP_05968109.1| aspartate--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288317336|gb|EFC56274.1| aspartate--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 590

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 76/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  + EQ+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAEQVREVMEALVRGLWNDVKGVELG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLVKSVEFAVFAGPANDAKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 48/151 (31%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S     K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDETKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      +     Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|212703761|ref|ZP_03311889.1| hypothetical protein DESPIG_01809 [Desulfovibrio piger ATCC 29098]
 gi|212672729|gb|EEB33212.1| hypothetical protein DESPIG_01809 [Desulfovibrio piger ATCC 29098]
          Length = 618

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 16/181 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R +  L  R+ +  ++R    ++ F+E+++  L   +P      R F     +    
Sbjct: 157 RRPRMQANLRLRHKVAQAIRRQLDDDGFLEVETPVLTKSTPEG---ARDFLVPSRLN--P 211

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G ++ F     +R+ +     QPEFT ++   +    E++
Sbjct: 212 GQFYALPQSPQLFKQLLMVGGFDRYFQIVRCFRDEDLRADRQPEFTQVDIEMSFVDEEKV 271

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M    N++                           +   EA  RY  +D   T    +  
Sbjct: 272 MTMAENLMARVFHDVMGMDIP---------RPFPRMKYEEAMRRY-GVDKPDTRFGLELV 321

Query: 193 D 193
           D
Sbjct: 322 D 322



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 52/150 (34%), Gaps = 15/150 (10%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           Q G+   +   +  +    L E  E       C      PAP               + +
Sbjct: 434 QLGLIPENTFNFLWVTEFPLFEYSEEEKRYVACHHPFTSPAPGHLEIMNSDPARALARAY 493

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEK-----EMQEKKKIYNETYPIDEDFLACLT-EM 316
           ++     E+      +     QRH F+      E  E +             +  L    
Sbjct: 494 DMVLNGNEVGGGSIRIHSAEVQRHMFQALGFTPEQAEAQFG---------FLIQALEHGA 544

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DRLVML++GA++I +VI  P
Sbjct: 545 PPHGGLAFGLDRLVMLLSGASSIRDVIAFP 574


>gi|62180479|ref|YP_216896.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|81309667|sp|Q57N96|SYD_SALCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62128112|gb|AAX65815.1| aspartate tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
          Length = 590

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVEISFMTALQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S    +K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|301384823|ref|ZP_07233241.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302063523|ref|ZP_07255064.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302130613|ref|ZP_07256603.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
          Length = 591

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F +  ++T  EA  RY   
Sbjct: 236 DIETSFLNEEDIIGLTEKMVRQLFKEVLD----------VEFGDFPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D        +        +D    +
Sbjct: 285 DKPDLRNPLELVDVADQLNAVEFKVFSGPANDPKGRV 321



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 52/162 (32%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N     +        P          
Sbjct: 407 EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFSALHHPFTAPKCTPEELEAN 466

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 467 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 521

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 522 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 563


>gi|283785604|ref|YP_003365469.1| aspartyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282949058|emb|CBG88661.1| aspartyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 590

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 76/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  + EQ+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAEQVREVMEALVRNLWLEVKGVDLG----------DFPIMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFSGPANDPKGRV 318



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 49/151 (32%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                +     K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLNLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKEMTAAELKAAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|229098874|ref|ZP_04229810.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229105037|ref|ZP_04235690.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|229117899|ref|ZP_04247261.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665556|gb|EEL21036.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228678376|gb|EEL32600.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228684547|gb|EEL38489.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 591

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 68/190 (35%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +     F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAADC 308



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|331016436|gb|EGH96492.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 591

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F +  ++T  EA  RY   
Sbjct: 236 DIETSFLNEEDIIGLTEKMVRQLFKEVLD----------VEFGDFPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D        +        +D    +
Sbjct: 285 DKPDLRNPLELVDVADQLNAVEFKVFSGPANDPKGRV 321



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 5/96 (5%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
           ++ +++     EL      +     Q+  F    +      +E        L  L    P
Sbjct: 472 SRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDALKYGAP 527

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 528 PHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 563


>gi|307186072|gb|EFN71804.1| Probable asparaginyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 419

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/354 (12%), Positives = 99/354 (27%), Gaps = 49/354 (13%)

Query: 13  DFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI- 67
               R R F   L  R++    + ++  +  FI + +  L  +       +         
Sbjct: 89  HLRPRTRRFSSLLRLRDLATMVINDHLRDRGFISVHTPILTSNDCEGAGEVFTVRPHSKE 148

Query: 68  ------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL-HQ 114
                        + +     +L  S +    +++A    K++ F   +R        H 
Sbjct: 149 ILKDMRKEGQSEDEIYFNTSAFLTVSGQLHL-EVVARALTKVYTFGPTFRAENSKSRLHL 207

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF MLE   A  +Y + + + +       +   ++I      +      P         
Sbjct: 208 SEFYMLEGEIAFITYIEELIEEI---ELLVKEVTKQIIEKGASDLYSIGAP--------- 255

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                 DL               +        ++     + + FS+     +        
Sbjct: 256 ------DLRWVNKTFGCLTYEEAFNILNNHANQLQQPIKYGEAFSKEHELFLV-KYNDGI 308

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              +  +P                T      A    L     E++    +     ++  +
Sbjct: 309 PIFVINWPRAIKPFYMK-----ECTDDSSKVAALDLLAPDVGEMIGGSIR-----EDNYQ 358

Query: 295 KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           K K+   +      +L         + G  MGF+R +  + G NNI + +  P 
Sbjct: 359 KLKLKLPSMGNLSWYLELRKYGNVPTGGFGMGFERFLQCILGINNIKDTVPFPR 412


>gi|297616961|ref|YP_003702120.1| aspartyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144798|gb|ADI01555.1| aspartyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 592

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 72/195 (36%), Gaps = 23/195 (11%)

Query: 6   SQPWWNRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
            +    R  +   RRP     L+ R+ +  ++R++  +  F+EI++  L   +P     +
Sbjct: 122 DEHLRLRYRYLDLRRPEMKNNLVFRHRVIKAMRDFLDKRGFLEIETPILTKSTPEGARDY 181

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ AG EK F  A  +R+ +     QPEFT
Sbjct: 182 LVPSRVHPGEFFALPQ------SPQLFKQILMVAGMEKYFQVARCFRDEDLRADRQPEFT 235

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   +    E + +   +++    E    +            +    +T  EA  RY 
Sbjct: 236 QLDIETSFVEEEDIFELVESMLSEVIEEVMGRRVD---------TPFLRLTYQEAMTRY- 285

Query: 179 NIDLGTTLDNPDQPD 193
             D        +  D
Sbjct: 286 GTDKPDLRFGLEITD 300



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           +L     ++  +    D ++  I    +L    E    +            +       P
Sbjct: 408 NLRLELGKKLKLAREEDLSFVWITDFPLLEYDDEEKRYVAVHHPFTAPRIEDIPRLEQEP 467

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDF 309
              R ++ ++L     E+      +     Q   F      + + K+K            
Sbjct: 468 LRVR-SRAYDLVLNGTEVGGGSIRIHQRELQERMFSLLGMSQDEAKQKFG--------FL 518

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           L       P   GIA G DRL+ML++G  +I +VI  P +QS
Sbjct: 519 LEAFEYGTPPHGGIAFGVDRLLMLLSGRESIRDVIAFPKTQS 560


>gi|268589741|ref|ZP_06123962.1| aspartate--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314893|gb|EFE55346.1| aspartate--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 589

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 74/227 (32%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  +  F+++++  L   
Sbjct: 109 PLDSNQTNTEERRLKYRYLDLRRPEMSDRLRTRAKITSFVRNFMDKEGFLDVETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  + EQ+ +    +IR                          +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAEQVREIMERMIRNLWLEVKGVDLGN----------FPIMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   +    + A      +D    +
Sbjct: 273 AEAMRRY-GSDKPDLRNPMELVDVADIVKDVEFAVFSGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S        +      +++     E+      +     Q+  F
Sbjct: 441 EGGLTAMHHPFTSPKDFSPEELASKPEEAVANAYDMVINGYEVGGGSVRIHRNEMQQTVF 500

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L    P  +G+A G DRLVML+TG +NI +
Sbjct: 501 SILGINEEDQREKFG----------FLLDALKYGTPPHAGLAFGLDRLVMLLTGTDNIRD 550

Query: 342 VIWTP 346
           VI  P
Sbjct: 551 VIAFP 555


>gi|160932387|ref|ZP_02079777.1| hypothetical protein CLOLEP_01222 [Clostridium leptum DSM 753]
 gi|156868346|gb|EDO61718.1| hypothetical protein CLOLEP_01222 [Clostridium leptum DSM 753]
          Length = 598

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 64/187 (34%), Gaps = 17/187 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I    R+YF +N F+E+++  L   +P     ++            
Sbjct: 139 RRPDVQDKIIARHKIVKIARDYFDQNGFVEVETPILIKSTPEGARDYLVPSRVFPGSFFA 198

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   +  + AG ++    A  +R+ +     QPEFT ++   +    E 
Sbjct: 199 LPQ------SPQLYKQLTMLAGFDRYMQIARCFRDEDLRADRQPEFTQIDLEMSFIDEED 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M      ++   +                 +    +T AE   R+ +           +
Sbjct: 253 IMSMAEGFVKTVYKEVLDVEIQ---------TPFPRMTYAEGMERFGSDKPDLRFGYELK 303

Query: 192 PDRHLLY 198
               +L 
Sbjct: 304 NLTEVLK 310



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q GI          I    L E  E             +P  E         
Sbjct: 414 ALRCECARQMGIIDESRPNLLWITDFPLFEYDEEEGRFVAKHHPFTHPNDEDLEQLETNP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                + +++     E+      + DP  Q+  F      K   +   E        +  
Sbjct: 474 GAVRARAYDMVLNGNEVGGGSIRINDPALQQRMF------KALGFTQEEAQERFGFLIDA 527

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P   G+A G DRLVML+ G ++I +VI  P
Sbjct: 528 FRYGAPPHGGMAFGLDRLVMLMLGCDSIRDVIAYP 562


>gi|309775570|ref|ZP_07670570.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916664|gb|EFP62404.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 581

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 75/205 (36%), Gaps = 21/205 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R+ I  S+REY     FIEI++  L   +P     ++            
Sbjct: 128 RRPQMQQKLILRHKITHSMREYLDSKAFIEIETPMLGRSTPEGARDYLVPSRVHPGSFYA 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ + FA  +R+ +     Q +FT ++   +  S  +
Sbjct: 188 LPQ------SPQLYKQLLMVSGFERYYQFARCFRDEDLRADRQTDFTQVDLETSFLSDVE 241

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +    K  S              +T  EA  RY   D      + + 
Sbjct: 242 IQTMMEEMLQKLMKDVKGKDIS---------IPFPRLTWTEAMNRY-GSDKPDNRFDLEL 291

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSD 216
            D   L+      G +V  D   + 
Sbjct: 292 QDITELFEHC---GFKVFADCIAAK 313



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 13/149 (8%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G++  ++ ++  +    + E  E +            P  E                +
Sbjct: 409 ELGLKKTNEFSYLWVTDFPMFEYSEEDGRWYAMHHPFTRPRDEDMQYIDTDPGKVHAIAY 468

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACL-TEMP 317
           ++     EL      + D   Q   FE     E + ++            F+  L    P
Sbjct: 469 DVVLNGYELGGGSLRIYDGAMQDKMFEVLGFTEEKIQENFG--------WFVDALKYGTP 520

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              G+A G DR+ M+++ +++I +VI  P
Sbjct: 521 PHGGLAFGLDRIAMILSESDSIRDVIAFP 549


>gi|188533627|ref|YP_001907424.1| aspartyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238691995|sp|B2VJ90|SYD_ERWT9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188028669|emb|CAO96531.1| Aspartyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 595

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 77/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S    + +   + R            L  R  I S +R +  +  F++I++  L   
Sbjct: 109 PLDSNHINSEEARLKYRYLDLRRPDMANRLKTRAKITSFVRRFMDDQGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R            +Q+V          +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMERLVREL----------WQDVKSVDLGAFPSMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    +        +D    +
Sbjct: 273 AEAMRRY-GSDKPDLRNPMELVDVADLLKNVEFKVFSGPANDVKGRV 318



 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S        +      +++     E+      + +   Q+  F
Sbjct: 441 EDGLTAMHHPFTAPKEMSPEQLKNAPETAIANAYDMVINGYEVGGGSVRIHNGQMQQTVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 GILGITEQEQREKFG--------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|269468785|gb|EEZ80389.1| aspartyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 584

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ +   +RE+   N F++I++  L   +P     ++    T       
Sbjct: 131 RRDEMQQRLRLRSKVTHFMREFMDNNDFLDIETPFLTKATPEGARDYLVPSRTHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ +     +R+ +     QPEFT L+   +    ++
Sbjct: 191 LPQ------SPQLFKQLLMMSGFERYYQIVKCFRDEDLRADRQPEFTQLDVETSFMDEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + R   +           ++ +  +E   IT A+A + Y  +D      +   
Sbjct: 245 IMAMMEEMTRGMFKSV---------IDVDLPAEFPTITYADAMSLY-GVDRPDMRISMQI 294

Query: 192 PDRHLLYL 199
            D   L  
Sbjct: 295 TDMDELMQ 302



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 45/124 (36%), Gaps = 12/124 (9%)

Query: 233 NCCTILDRYP---APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
           +       +P       A      AD   ++ ++L     E+      +     Q     
Sbjct: 437 DGSLNAIHHPFTAPSVDAKTLESTADTALSRAYDLVINGSEVGGGSIRIHQVEMQ----- 491

Query: 290 KEMQEKKKI--YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +   K      +E        L  L    P   G+A G DRLVM++TG ++I EVI  P
Sbjct: 492 -QTVLKLLGISDDEAKDKFGFLLDALEYGCPPHGGMAFGLDRLVMIMTGTDSIREVIAFP 550

Query: 347 FSQS 350
            +Q+
Sbjct: 551 KTQT 554


>gi|15645242|ref|NP_207412.1| aspartyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|3024680|sp|P56459|SYD_HELPY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2313739|gb|AAD07682.1| aspartyl-tRNA synthetase (aspS) [Helicobacter pylori 26695]
          Length = 577

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 98/344 (28%), Gaps = 18/344 (5%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  EN  + +    LQ        T  + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDENDVMGVVEDLLQEIFKAVGHTISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
            +        Y    P+   +  L    +     ++A  +             L    A 
Sbjct: 269 RMPYKEAMENYGSDKPDLRFELPLIEVGDCFRDSSNAIFSNTAKDPKNKRIKALNVKGAD 328

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANIDLGTT 185
             + + +   +                 +      P  +       +      +  +G  
Sbjct: 329 ALFSRSVLKELEEFVRQFGAKGLAYLQIKEDEIKGPLVKFLSEKGLKNILERTDAQVGDI 388

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           +      D+ ++     +  ++VA   D    D  + + +                 +P 
Sbjct: 389 V-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPF 447

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                      +      +++    +EL      +     Q+  FEK          E  
Sbjct: 448 TMPKNIECEDIEEVEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQ 503

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 L  L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 504 KKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSIRDVIAFP 547



 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 64/219 (29%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQEIFKAVGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +       A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFRDSSNAIFSNTAKDPKNKRI 319


>gi|229032053|ref|ZP_04188035.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729245|gb|EEL80240.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 591

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 68/190 (35%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +     F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|329724666|gb|EGG61172.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 588

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 24/201 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+    S+R+Y   N F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++    +++R   +       S              +T AEA  R+   D   T    +
Sbjct: 249 DIIAMGEDMLRKVVKDVKGIDVS---------GPFPRMTYAEAMDRF-GSDKPDTRFGME 298

Query: 191 QPDRHLLYLQAQQAGIRVAHD 211
             +   L    ++   +V  D
Sbjct: 299 LINVSQL---GKEMNFKVFKD 316



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRIKLAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q+  FE           +        L    
Sbjct: 470 ENVQANAYDIVLNGYELGGGSIRIHDGELQQKMFEVLG----FTNEQAQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|330872656|gb|EGH06805.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 591

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F +  ++T  EA  RY   
Sbjct: 236 DIETSFLNEEDIIGLTEKMVRQLFKEVLDL----------EFGDFPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D        +        +D    +
Sbjct: 285 DKPDLRNPLELVDVADQLNAVEFKVFSGPANDPKGRV 321



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 52/162 (32%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N     +        P          
Sbjct: 407 EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFSALHHPFTAPKCTPEELEAN 466

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 467 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 521

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 522 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 563


>gi|154292327|ref|XP_001546739.1| hypothetical protein BC1G_14618 [Botryotinia fuckeliana B05.10]
 gi|150846194|gb|EDN21387.1| hypothetical protein BC1G_14618 [Botryotinia fuckeliana B05.10]
          Length = 460

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 88/325 (27%), Gaps = 20/325 (6%)

Query: 40  QFIEIDSMSLQYS---PGNETHIRAFSTELIIQDHIR------KPLYLQTSPEFSCKKLL 90
            +++     +  S      E      S                 P YL  S +    + L
Sbjct: 123 DYVQTHPPIITSSDCEGAGEVF-EVGSAHKGPVGKADDGTFFRSPKYLTVSSQLHL-EAL 180

Query: 91  AAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ 149
           A    +++  +  +R  +     H  EF MLE   +       + D +  +         
Sbjct: 181 AQSVGRVWALSPTFRAEKSDTPRHLSEFYMLEAECSFVEKMDEVMDLVENMLRHLTTNLY 240

Query: 150 KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                + +  +  S  E                G       +        + + +G    
Sbjct: 241 STQVGREILESKRSGDEEKDTINRRHELTRRWEGMIRGPWPRITYAQAIEELENSGQTFE 300

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
           +   W           I   +G+     +  YP        +     R     E   C  
Sbjct: 301 YPPVWGSGLQAEHERYIANKVGLGSPVFVTDYPKSIKPFYMLPSESSRVGGTLETVQCFD 360

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT--------EMPQSSG 321
            L     E++    + +R  + +   +          E+ L  L               G
Sbjct: 361 LLVPEACEIVGGSMREYRLPELISAMRANGMVRGDAGEEELGSLKWYTELRRWGSVPHGG 420

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
             +GFDRL+  ++G  NI E++  P
Sbjct: 421 FGLGFDRLLGYLSGVQNIREIVAFP 445


>gi|296101795|ref|YP_003611941.1| aspartyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295056254|gb|ADF60992.1| aspartyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 590

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 76/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  + EQ+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAEQVREVMEALVRSLWNDVKGVELG----------DFPIMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLVKSVEFAVFAGPANDPKGRV 318



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 48/151 (31%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                +     K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLNLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPEEAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      +     Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|89094833|ref|ZP_01167766.1| aspartyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89080888|gb|EAR60127.1| aspartyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 586

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 76/213 (35%), Gaps = 19/213 (8%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFST 64
           +  +        +  +  R+ + +++R Y  +N F++I++  L   +P     ++     
Sbjct: 125 RHRYIDLRRPEMQEKMRFRSKVTNAIRNYLDDNGFLDIETPILNRATPEGARDYLVPSRV 184

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                    +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   
Sbjct: 185 HE------GQFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQIDIET 238

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    E +M    N+IR               +      +   +  +EA  RY   D   
Sbjct: 239 SFMDEEGIMALTENMIRKLFLE----------MKDVDLGDFPRMPYSEAMQRY-GSDKPD 287

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
                +  D   L  + +        +D  S +
Sbjct: 288 LRYPMELVDVADLMAEIEFKVFAGPANDPKSRV 320



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 50/140 (35%), Gaps = 6/140 (4%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
             W+ ++        E + G+         P+  +      P +   ++ +++     EL
Sbjct: 424 CEWAPLWVVDFPMFEETDAGLTALHHPFTAPSCTADELKANPLEA-LSRAYDMVLNGCEL 482

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
                 + D   Q    E           E        L  L    P   G+A G DRL+
Sbjct: 483 GGGSVRIHDQEMQAKVLEILGIS----DEEAEDKFGFLLNALQFGAPPHGGLAFGLDRLI 538

Query: 331 MLVTGANNINEVIWTPFSQS 350
           ML+TG  +I EVI  P +QS
Sbjct: 539 MLMTGTESIREVIAFPKTQS 558


>gi|196039236|ref|ZP_03106542.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029863|gb|EDX68464.1| aspartate--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 591

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 68/190 (35%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +     F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|314933794|ref|ZP_07841159.1| aspartate--tRNA ligase [Staphylococcus caprae C87]
 gi|313653944|gb|EFS17701.1| aspartate--tRNA ligase [Staphylococcus caprae C87]
          Length = 588

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 20/179 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+    S+R+Y  +N F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQTTRSIRQYLDDNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            ++     ++R   +                      +T AEA  RY +    T  D  
Sbjct: 249 DVISMGEEMLRKVVKDVKGIDVEES---------FPRMTYAEAMDRYGSDKPDTRFDME 298



 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 17/159 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRIKLAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKQEDISKLDSEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +      +++     EL      + D   Q+  FE      ++ QE+             
Sbjct: 470 ENVQANAYDIVLNGYELGGGSIRIHDGELQQKMFEVLGFSTEQAQEQFG----------F 519

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L       P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 520 LLDAFKYGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|330964821|gb|EGH65081.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 591

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F +  ++T  EA  RY   
Sbjct: 236 DIETSFLNEEDIIGLTEKMVRQLFKEVLDL----------EFGDFPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D        +        +D    +
Sbjct: 285 DKPDLRNPLELVDVADQLNAVEFKVFSGPANDPKGRV 321



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 52/162 (32%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N     +        P          
Sbjct: 407 EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFSALHHPFTAPKCTPEELEAN 466

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 467 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 521

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 522 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 563


>gi|326514634|dbj|BAJ96304.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 70/189 (37%), Gaps = 19/189 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              + +  L  R+ +   +R Y  +   F+EI++  L   +P     ++     +     
Sbjct: 223 RRPQMQSNLRLRHKVIKHIRRYLEDRHDFVEIETPILSKSTPEGARDYLVPSRVQPGTCF 282

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+A+G EK F  A  +R+ +     QPEFT L+   A  S E
Sbjct: 283 ALPQ------SPQLFKQMLMASGFEKYFQIARCFRDEDLRADRQPEFTQLDMEIAFTSME 336

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++K    ++    +                      +T  EA  RY   D      + +
Sbjct: 337 DMLKLNEELMIHIFQEVGDIKLPKC---------FPRLTYTEAMNRY-GTDRPDLRFDWE 386

Query: 191 QPDRHLLYL 199
             D   ++L
Sbjct: 387 LKDASDVFL 395



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 15/146 (10%)

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
           ++   DT +     +    +              +P       ++          +++  
Sbjct: 511 KLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNPEDMNDLPSARALAYDMIY 570

Query: 267 CNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
             +E+      +     Q+  FE      ++ +EK     E + +           P   
Sbjct: 571 NGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDM---------GAPPHG 621

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DRLVML+   ++I +VI  P
Sbjct: 622 GIAYGLDRLVMLLARESSIRDVIAFP 647


>gi|224373072|ref|YP_002607444.1| aspartyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223589148|gb|ACM92884.1| aspartyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 588

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 77/214 (35%), Gaps = 23/214 (10%)

Query: 6   SQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           ++    +  +   R        + R+ +  ++R+YF  N F+++++  L   +P     +
Sbjct: 119 NEELRLKYRYLDLRDPNSLNTFILRSKVTKAIRDYFESNGFLDVETPILTKSTPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT
Sbjct: 179 LVPSRIHPGEFYALPQ------SPQLFKQILMVAGFDRYYQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +    + ++     +I+ A +VA                    +T AEA  +Y 
Sbjct: 233 QVDVEMSFVEEDDVIAAIEGMIKEAFKVAG----------VEVSLPIPRMTYAEAMEKYG 282

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
           +       D P             +    +A D 
Sbjct: 283 SDKPDLRFDLPMVDVIDEFVDSNNEIFSTIAKDK 316



 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI---EPNLGINCCTILDRYPAPESALA 249
           D+  +     +  +++A+D    D         +         N       +P     + 
Sbjct: 397 DKKTVLDYMGRLRVKIANDMGLIDENEYKFTWIVDFPMFEKDDNGNPTPLHHPFTMPDMD 456

Query: 250 NIYPADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETY 303
                D     +  ++L     E+      +     Q   F+     EM+ K+K      
Sbjct: 457 TWDEEDFESIQSIAYDLVLNGYEIGGGSIRIHKEEIQEKVFKMLGIDEMEAKEKFG---- 512

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
                 L  L    P   G A+G DR++ML+T  +NI +VI  P +Q  Q
Sbjct: 513 ----FLLDALKFGAPPHGGFALGLDRVIMLMTKTDNIRDVIAFPKTQKAQ 558


>gi|327439657|dbj|BAK16022.1| aspartyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 590

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 67/190 (35%), Gaps = 21/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +     F+E+++  L   +P     ++            
Sbjct: 134 RRPVMYDTFKMRSDVTRTIRNFLQNEGFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT ++   +  S ++
Sbjct: 194 LPQ------SPQLFKQLLMVGGFEKYFQIARCFRDEDLRADRQPEFTQVDIETSFLSMDE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++                   +  +    ++  EA  R+ +           +
Sbjct: 248 IIEMNERLL---------TQVMKDVKGIDVVTPFPRMSYKEAMDRFGSDKPDVRFGLELK 298

Query: 192 PDRHLLYLQA 201
               ++   A
Sbjct: 299 QLSDIVKESA 308



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+       +  I    L E  E              P  E         
Sbjct: 408 ALRLKLGKELGLIDESKFEFLWIVDWPLFEYDEAEGRYYAAHHPFTRPFDEDLELMNTNP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
                + +++     EL      + +P  Q   FE     E + + +            L
Sbjct: 468 KEVRAQAYDIVLNGYELGGGSLRIYEPDLQAKMFELLGFTEEEARAQFG--------FLL 519

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 +P   G+AMG DRLVML+ G  N+ + I  P
Sbjct: 520 EAFDYGVPPHGGLAMGLDRLVMLLAGRTNLRDTIAFP 556


>gi|229006737|ref|ZP_04164371.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754598|gb|EEM04009.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 591

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 66/190 (34%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMYNTFKMRHDVTKTIRNFLDSEEFLEVETPILTKSTPEGARDYLVPSRVHEGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E  +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFECYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++                      +    +  A+A ARY   D   T    + 
Sbjct: 249 ILEMMERMM---------TKVMKDAKGVEVRAPFPRMKYADAMARY-GSDKPDTRFAMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAADC 308



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|222617760|gb|EEE53892.1| hypothetical protein OsJ_00416 [Oryza sativa Japonica Group]
          Length = 675

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 19/189 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              + +  L  R+ +   +R Y  +   F+EI++  L   +P     ++     +  +  
Sbjct: 223 RRPQMQSNLRLRHNVVKHIRRYLEDRHDFVEIETPVLSKSTPEGARDYLVPSRVQPGMFY 282

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G EK +  A  +R+ +     QPEFT L+   A  S E
Sbjct: 283 ALPQ------SPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQPEFTQLDMEIAFTSME 336

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++K    ++R   +            +    +    +T  EA  RY   D      +  
Sbjct: 337 DMLKLNEELMRHIFQEVG---------DIKLPNPFPRLTYTEAMNRY-GTDRPDLRFDWQ 386

Query: 191 QPDRHLLYL 199
             D    +L
Sbjct: 387 LKDVSDAFL 395



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 15/146 (10%)

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
           ++   DT +     +    +              +P       ++          +++  
Sbjct: 511 KLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNPEDMNDLPSARALAYDMIY 570

Query: 267 CNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
             +E+      +     Q+  FE      ++ +EK     E + +           P   
Sbjct: 571 NGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDM---------GAPPHG 621

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DRLVML+ G N+I +VI  P
Sbjct: 622 GIAYGLDRLVMLLAGENSIRDVIAFP 647


>gi|331007229|ref|ZP_08330436.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418945|gb|EGG93404.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 597

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 76/207 (36%), Gaps = 22/207 (10%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQD 70
            RR+     L  R+ + +++R Y  +N F++I++  L   +P     ++    T      
Sbjct: 131 LRRQEMQNNLRIRSKVTTAMRNYLDDNGFLDIETPILTRATPEGARDYLVPSRTHEGKFF 190

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +  S E
Sbjct: 191 ALPQ------SPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFMSDE 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++M     +I              ++           +  +EA A+Y   D        +
Sbjct: 245 EIMSVTEGMINALF----------KSQMDIELGSFPRMPYSEAIAKY-GSDKPDLRIPLE 293

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             D   L    +        +D    I
Sbjct: 294 LVDIKDLLTDVEFKVFSGPANDPNGRI 320



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 14/144 (9%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
             W+ ++        E + G          PA         P +   +  +++     EL
Sbjct: 425 CEWAPLWVVDFPMFEETDAGWTSLHHPFTAPACSPEALKANPGEA-LSVAYDMVLNGTEL 483

Query: 272 CNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
                 + DP  Q+  FE     E ++++K            L  L    P   G+A G 
Sbjct: 484 GGGSIRIHDPKMQQTVFEILGIGEEEQREKFG--------FLLDALQYGAPPHGGLAFGL 535

Query: 327 DRLVMLVTGANNINEVIWTPFSQS 350
           DRL+ML+TG+ +I +VI  P +Q+
Sbjct: 536 DRLIMLMTGSGSIRDVIAFPKTQT 559


>gi|28871126|ref|NP_793745.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|37999385|sp|Q87Y31|SYD_PSESM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28854376|gb|AAO57440.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 591

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F +  ++T  EA  RY   
Sbjct: 236 DIETSFLNEEDIIGLTEKMVRQLFKEVL----------NVEFGDFPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D        +        +D    +
Sbjct: 285 DKPDLRNPLELVDVADQLNAVEFKVFSGPANDPKGRV 321



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 52/162 (32%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N     +        P          
Sbjct: 407 EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFSALHHPFTAPKCTPEELEAN 466

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 467 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 521

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 522 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 563


>gi|91793242|ref|YP_562893.1| aspartyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123060934|sp|Q12N06|SYD_SHEDO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91715244|gb|ABE55170.1| aspartyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 593

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 74/206 (35%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R  + S++R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAERLIFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEE 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R                      E   +T  EA  R+   D     +  + 
Sbjct: 246 VMVKTEEMMRGLFLELL----------NVDLGEFPRMTYNEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + + A      +D    +
Sbjct: 295 VDVADLLKEVEFAVFNGPANDEEGRV 320



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 14/150 (9%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +AG      +        I     E  N G +        P   +A         R +  
Sbjct: 414 KAGEDFELLEGQWRPLWVIDFPMFEKINGGFHAVHHPFTAPRGVTAAELEANPANRVSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACL-TEM 316
           +++     EL      + +   Q   F     +E + K+K            L  L    
Sbjct: 474 YDMVLNGCELGGGSVRIHNAEMQSAVFRILGIEEEEAKEKFG--------FLLEALRYGT 525

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P  +G+A G DR++ML+TGA +I +V+  P
Sbjct: 526 PPHAGLAFGLDRIIMLMTGATSIRDVMAFP 555


>gi|22298687|ref|NP_681934.1| aspartyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|46577258|sp|Q8DJS8|SYD_THEEB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|22294867|dbj|BAC08696.1| aspartyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 605

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 71/201 (35%), Gaps = 22/201 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +  ++R +  +   FIE+++  L   +P     ++           
Sbjct: 136 RRERMARNLRLRHRVVQAMRRFLEDEAGFIEVETPILTRSTPEGARDYLVPSRVNP---- 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
              +   L  SP+   + L+ AG ++ +  AH +R+ +     QPEFT L+   +    E
Sbjct: 192 --GEWFALPQSPQLFKQLLMVAGCDRYYQIAHCFRDEDLRADRQPEFTQLDMEMSFMDQE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++     +I    +                      ++  EA  RY   D   T    +
Sbjct: 250 EILDLNEALICHIFKTVKG---------IELPRPFPRLSYQEAMDRY-GTDKPDTRYGLE 299

Query: 191 QPDRHLLYLQAQQAGIRVAHD 211
             D   +    + +G +V   
Sbjct: 300 LVD---VSDILKDSGFKVFSG 317



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 47/168 (27%), Gaps = 16/168 (9%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD-RY 241
           G T       DR    +  +   I          +   +     E              +
Sbjct: 406 GETATVNKTLDRLRQTIAREFNLIDPTATHLLWVVDFPMFEWNAEEKRLEALHHPFTAPH 465

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P                 + ++L     E+      +  P  QR  FE          +E
Sbjct: 466 PEDLG------DLKTARAQAYDLIFNGHEVGGGSLRIHQPELQRQVFEI------IGIDE 513

Query: 302 --TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                     L       P   GIA G DRLVML+ GA++I + I  P
Sbjct: 514 ATAQEKFGFLLEAFEFGTPPHGGIAYGLDRLVMLLAGADSIRDTIAFP 561


>gi|256823083|ref|YP_003147046.1| aspartyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796622|gb|ACV27278.1| aspartyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 590

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 72/202 (35%), Gaps = 18/202 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R+ + S++R Y  E+ FI++++  L   +P     ++            
Sbjct: 136 RRPEMAQNMIFRHKVTSAMRRYMDEHGFIDVETPILTKATPEGARDYLVPSRVHKGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT L+   +    E+
Sbjct: 196 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQLDIETSFLDQEE 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +IR   +                      ++ AEA  RY +       D    
Sbjct: 250 VMQLMEGLIRHLFQEL----------MAIELPAFPRMSYAEAMERYGSDKPDLRTDMELV 299

Query: 192 PDRHLLYLQAQQAGIRVAHDDT 213
               ++     +     A D+ 
Sbjct: 300 TVDEIVKDVEFKVFAGPAKDEQ 321



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 13/140 (9%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
           D W  ++        E +  I+        P    A A         +K +++     E+
Sbjct: 426 DEWKPLWVVDFPMFEEIDGEIHALHHPFTAPKDNDAAAVKANPTETLSKAYDMVLNGSEV 485

Query: 272 CNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGF 326
                 + +   Q   F+     E ++K+K            L  L    P   G+A G 
Sbjct: 486 GGGSIRIHNQDMQETVFDILGIDETEQKEKFG--------FLLDALKFGCPPHGGLAFGL 537

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DRLVML+ GA++I +VI  P
Sbjct: 538 DRLVMLMVGADSIRDVIAFP 557


>gi|121705394|ref|XP_001270960.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus clavatus
           NRRL 1]
 gi|119399106|gb|EAW09534.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus clavatus
           NRRL 1]
          Length = 540

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 108/400 (27%), Gaps = 63/400 (15%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS 52
           + QIP         H R R          R+     L   F       F+++    +  S
Sbjct: 144 LRQIP---------HLRLRTPFNSLLSRFRSECLYQLGNVFRNAPHGGFVQVQPPLITSS 194

Query: 53  ---PGNETH-------IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
                 ET            +++   +   R P YL  S +   +   AA    ++    
Sbjct: 195 DCEGAGETFTVVPREAATGSASDNEGEHFFRAPKYLTVSSQLHLEAY-AAELGNVWTITP 253

Query: 103 AWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNI------IRCAAEVANQKIFSFQ 155
           A+R  +     H  EF MLE           + D +        +R       Q++ S +
Sbjct: 254 AFRAEKSDTPRHLSEFYMLEAEMNFMDDLGALTDSVEYTLRDLTLRLYRSPVRQEMLSAK 313

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
                                   +D              LL L   +  +   +  +W 
Sbjct: 314 RSGETGEDPTHGAVSGLQRRWIDLVDGPKWRRMTYTQAIELLQLAVAKGQVSFEYAPSWD 373

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALAN--IYPADPRFTKRFELYACNIELCN 273
                     I   L       +  YP             ++ R +   E  AC   L  
Sbjct: 374 GGLQLEHERYIVDGLNDGQPVFVTDYPKAVKPFYMAPSQVSEERDSTPGETVACFDLLLP 433

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYN-------------ETYPIDEDFL--ACLTEM-- 316
              E+     + HR  + +Q  +                 E  P+    L    L  +  
Sbjct: 434 EVSEVAGGSLREHRLPEIIQNMRAHGLIKAREASTAETAAEEEPLYPHLLPHESLGHLQW 493

Query: 317 ---------PQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                        G  +GFDR V  + G +++ +V+  P 
Sbjct: 494 YADLRRWGSAPHGGYGLGFDRFVSYLAGVSSVRDVVAFPR 533


>gi|300717088|ref|YP_003741891.1| Aspartyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299062924|emb|CAX60044.1| Aspartyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 596

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 29/209 (13%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  +N F++I++  L   
Sbjct: 109 PLDSNHANTEEARLKYRYLDLRRPDMAQRLKTRAKISSFVRRFMDDNGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R   +                      +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREIMEQLVRELWQDVKGVDLGN----------FPMMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           AEA  RY   D     +  +  D   L  
Sbjct: 273 AEAMRRY-GSDKPDLRNPMELVDVADLLK 300



 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 54/148 (36%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +   + W+ ++        E    G++        P   +        +      ++
Sbjct: 416 DLDITTGNAWAPLWVVDFPMFEEDGEGGLSAMHHPFTAPKDMTPEELKSIPETAIANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           +     E+      + +   Q+  F      E ++++K            L  L    P 
Sbjct: 476 MVINGYEVGGGSVRIHNTQMQQTVFGILGITEQEQREKFG--------FLLDALKYGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRLVML+TG +NI +VI  P
Sbjct: 528 HAGLAFGLDRLVMLLTGTDNIRDVIAFP 555


>gi|308160927|gb|EFO63393.1| Asparaginyl-tRNA synthetase [Giardia lamblia P15]
          Length = 548

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 50/354 (14%), Positives = 101/354 (28%), Gaps = 45/354 (12%)

Query: 12  RDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
            D   R R            L  R  I  + R +F    + E+   ++  +   E     
Sbjct: 215 PDARARERHLIHRGEHGSAILKARGRILRAFRNHFYFKGWTEVTPPTIVNT-ECEGGSSL 273

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
           F  +        +  YL  S +   + +L A    ++C   ++R  +     H  EFT L
Sbjct: 274 FRVDF-----YGEDAYLTQSSQLYLESVLPA-LGDVYCILPSFRAEKSNTRRHLSEFTHL 327

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI-----TVAEAFA 175
           E      ++  L+    + +             +  V        + I            
Sbjct: 328 ETEHPFITFSALLGIIEDFVISVVTELKNDKHFYPLVQFLNGDNFDKIALSLKKPFRRMR 387

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
               ID   +                ++ G    +DD   +   R +I+ I         
Sbjct: 388 HSEGIDWLNSHGIT------------KEDGTAFTYDDDIPEAQERRMIDTIGE------P 429

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
             L  +PA   +      +D   +  + L      L     E++    ++  +E   +  
Sbjct: 430 VFLTHFPAHLKSFYMARCSDDPSSPDYLLTESVDLLVPTVGEIVGGSMRKWTYEDTYKAF 489

Query: 296 KKIYNETYPIDEDFLAC--LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                        +L        P   G+ +G +R +  + G   + + +  P 
Sbjct: 490 VDAGMPIERY-YWYLDSRKFGGCP-HGGMGLGLERFICWLLGIYTVRDTVLYPR 541


>gi|229076031|ref|ZP_04209002.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228707065|gb|EEL59267.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 591

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 73/197 (37%), Gaps = 25/197 (12%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +     F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEDFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQAQQAGIRV 208
            D   L   A   G +V
Sbjct: 299 TD---LSEFAVDCGFKV 312



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|188025998|ref|ZP_02960488.2| hypothetical protein PROSTU_02440 [Providencia stuartii ATCC 25827]
 gi|188021211|gb|EDU59251.1| hypothetical protein PROSTU_02440 [Providencia stuartii ATCC 25827]
          Length = 601

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 75/228 (32%), Gaps = 29/228 (12%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  +  FI++++  L   
Sbjct: 120 PLDSNQSNTEERRLKYRYLDLRRPEMSERLRTRAKITSFVRNFMDKEGFIDVETPMLTKA 179

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 180 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 233

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  + EQ+ +    +IR                      +   +T 
Sbjct: 234 ADRQPEFTQIDVETSFMTAEQVREIMERMIRQLWLDVKGVDLG----------DFPIMTF 283

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
           AEA  RY   D     +  +  D   +    + A      +D    + 
Sbjct: 284 AEAMRRY-GSDKPDLRNPMELVDVADIVKNVEFAVFSGPANDPKGRVV 330



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 15/143 (10%)

Query: 211 DDTWSDIFSRILIEKIEP--NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
           D         I     E     G++        P   S        +      +++    
Sbjct: 432 DLNSWKPLWVIDFPMFEEDGEGGLSAMHHPFTSPRDYSPEDLAKNPEEAVANAYDMVING 491

Query: 269 IELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIA 323
            E+      +     Q+  F      E ++++K            L  L    P  +G+A
Sbjct: 492 YEVGGGSVRIHRSEMQQTVFNILGINEHEQREKFG--------FLLDALKYGTPPHAGLA 543

Query: 324 MGFDRLVMLVTGANNINEVIWTP 346
            G DRLVML+TG +NI +VI  P
Sbjct: 544 FGLDRLVMLLTGTDNIRDVIAFP 566


>gi|70983333|ref|XP_747194.1| aspartate-tRNA ligase [Aspergillus fumigatus Af293]
 gi|66844819|gb|EAL85156.1| aspartate-tRNA ligase, putative [Aspergillus fumigatus Af293]
          Length = 562

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 107/337 (31%), Gaps = 28/337 (8%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
             L   + +   + E+   N F  I S   + ++   +        E     +     +L
Sbjct: 240 AILKLHSGMCQLIVEFLGSNGFHWIHSPRIISHTVAGDK-------EYFHLPYFGGDAWL 292

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC---LHQPEFTMLEWYRAHESYEQLMKD 135
             + ++  + +L+   E++F    A+R   +      H  EFT+L      E     + D
Sbjct: 293 AQNAQYQNQMVLSTDMERVFDIGPAFRAEVKSRTSGRHLTEFTLLGTAMVLEENYYEVMD 352

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            M+ +        Q+   ++++        E +      A+   I L      P    + 
Sbjct: 353 LMDSMIVFVLKGLQERKKYRDL-------IEIVQNHYPTAQDFRIGLDEQGKIPRISFKE 405

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD--RYPAPESALA-NIY 252
              +   + G +    D  S+     L      +  +    I    +YPA       +  
Sbjct: 406 AKRMLRDELGFKTEDTDDLSEEEEAALGRHFRESPYLGQTDIFTIDQYPAFCRPFNTHPS 465

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           P  P FT  ++      E+C+    +                  +  +      E ++  
Sbjct: 466 PDAPGFTNSWDTIVRGREICSGSQRIHKYEAVCK------AMASRNMDPDGKEWEHYVGA 519

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               MP   G+ +G +RL+    G +++ E    P  
Sbjct: 520 FKSGMPPHGGLGLGVNRLLQGFLGLDDVRETTLFPRD 556


>gi|330959262|gb|EGH59522.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 590

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  +N F+++++  L   +P     ++ 
Sbjct: 121 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 181 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F E  ++T  EA  RY   
Sbjct: 235 DIETSFLNEEDIIGLTEKMVRQLFKEVLDL----------EFDEFPHMTFEEAMRRY-GS 283

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D        +        +D    +
Sbjct: 284 DKPDLRNPLELVDVADQLTGVEFKVFSGPANDPKGRV 320



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 59/189 (31%), Gaps = 11/189 (5%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           + +   +    +   D    +       R  +    +      A       +    + E+
Sbjct: 384 DRVGAVDGDIVFFGADKFKIVSEALGALRIKIGNDLKLHTCEWAPMW----VVDFPMFEE 439

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P          PA    ++ +++     EL      +     Q+
Sbjct: 440 NEDGSFTALHHPFTA-PKCTPEELEANPATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQ 497

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F    +      +E        L  L    P   G+A G DRLVML+TGA +I EVI 
Sbjct: 498 AVF----RLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIA 553

Query: 345 TPFSQSNQE 353
            P +QS  +
Sbjct: 554 FPKTQSAAD 562


>gi|288555366|ref|YP_003427301.1| aspartyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288546526|gb|ADC50409.1| aspartyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 595

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 59/181 (32%), Gaps = 17/181 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+     +R +  E  F+EI++  L   +P     ++            
Sbjct: 135 RRPDMQETFKLRHKTTKLIRNFLDEEAFLEIETPMLTKSTPEGARDYLVPSRVHHGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ +     +R+ +     QPEFT ++   +    E 
Sbjct: 195 LPQ------SPQIFKQLLMVSGFERYYQVVRCFRDEDLRADRQPEFTQIDIETSFMDKED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L+     ++    +       S              +T  EA  RY +    T  +    
Sbjct: 249 LLSMTEKMMAKVLKETKGVEVS---------LPMPRLTYDEAMNRYGSDKPDTRFEMELI 299

Query: 192 P 192
            
Sbjct: 300 E 300



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 53/179 (29%), Gaps = 19/179 (10%)

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCT 236
             +        D+       L A +       D    D F+ +      +          
Sbjct: 387 GEEGDLLFFAADKAQVVFDSLGALRLKFGKEFDLIDKDAFNFLWVVDFPLVEYDEDAKRY 446

Query: 237 ILDRYPAPESALANIY----PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-- 290
           +   +P      A+             + ++L     EL      + +   Q H F    
Sbjct: 447 VALHHPFTSPKKADRDLLATDPASVRAEAYDLVLNGYELGGGSQRIYEREIQEHMFRALG 506

Query: 291 --EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E + K++            L       P   GIA+G DRL+ML+ G  N+ + I  P
Sbjct: 507 FSEEEAKEQFG--------FLLEAFEYGTPPHGGIALGLDRLIMLLAGRTNLRDTIAFP 557


>gi|27468229|ref|NP_764866.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867125|ref|YP_188768.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|293366414|ref|ZP_06613092.1| aspartate-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258359|sp|Q8CS99|SYD_STAES RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287515|sp|Q5HNS2|SYD_STAEQ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|27315775|gb|AAO04910.1|AE016748_144 aspartyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57637783|gb|AAW54571.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|291319448|gb|EFE59816.1| aspartate-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329735236|gb|EGG71528.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737268|gb|EGG73522.1| aspartate--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 588

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 24/201 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+    S+R+Y   N F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++    +++R   +       S              +T AEA  R+   D   T    +
Sbjct: 249 DIIAMGEDMLRKVVKDVKGIDVS---------GPFPRMTYAEAMDRF-GSDKPDTRFGME 298

Query: 191 QPDRHLLYLQAQQAGIRVAHD 211
             +   L    ++   +V  D
Sbjct: 299 LINVSQL---GKEMNFKVFKD 316



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRIKLAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q+  FE           +        L    
Sbjct: 470 ENVQANAYDIVLNGYELGGGSIRIHDGELQQKMFEVLG----FTNEQAQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|282850505|ref|ZP_06259884.1| aspartate--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579998|gb|EFB85402.1| aspartate--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 601

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 69/200 (34%), Gaps = 17/200 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +  ++R++F    F+EI++  L   +P     ++            
Sbjct: 140 RRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYLVPSRVNAGTFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F     +R+ +     QPEFT L+   +    E 
Sbjct: 200 LPQ------SPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQPEFTQLDLEMSFVDEED 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    + A  K  S              IT  EA  +Y +       D    
Sbjct: 254 IYALLEEMIAHIFKTALGKEIS---------LPMPRITWDEAMDKYGSDKPDLRFDMAFT 304

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
               L+     +    V  +
Sbjct: 305 DVTDLVKDTEFKVFRSVIDN 324



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 47/160 (29%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       ++ +    + E  E              P            
Sbjct: 414 ELRLEMARRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++    +E+      +     Q   F+      +    E        L    
Sbjct: 474 GNVKAIAYDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIE----EARSKFGFMLDAFQ 529

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P  +G A G DRLVML+    +I +VI  P +QS  +
Sbjct: 530 YGAPPHAGCAFGLDRLVMLMAKRQSIRDVIAFPKTQSASD 569


>gi|269798267|ref|YP_003312167.1| aspartyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094896|gb|ACZ24887.1| aspartyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 601

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 69/200 (34%), Gaps = 17/200 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +  ++R++F    F+EI++  L   +P     ++            
Sbjct: 140 RRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYLVPSRVNAGTFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F     +R+ +     QPEFT L+   +    E 
Sbjct: 200 LPQ------SPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQPEFTQLDLEMSFVDEED 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    + A  K  S              IT  EA  +Y +       D    
Sbjct: 254 IYALLEEMIAHVFKTALGKEIS---------LPMPRITWDEAMDKYGSDKPDLRFDMAFT 304

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
               L+     +    V  +
Sbjct: 305 DVTDLVKDTEFKVFRSVIDN 324



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 47/160 (29%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       ++ +    + E  E              P            
Sbjct: 414 ELRLEMARRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++    +E+      +     Q   F+      +    E        L    
Sbjct: 474 GSVKAIAYDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIE----EARSKFGFMLDAFQ 529

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P  +G A G DRLVML+    +I +VI  P +QS  +
Sbjct: 530 YGAPPHAGCAFGLDRLVMLMAKRQSIRDVIAFPKTQSASD 569


>gi|226482506|emb|CAX73852.1| asparaginyl-tRNA synthetase [Schistosoma japonicum]
          Length = 546

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 49/352 (13%), Positives = 111/352 (31%), Gaps = 47/352 (13%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
           Q+ ++    R  +  +   L   ++  ++ R ++++  ++E+   +       G  T   
Sbjct: 228 QLDNRHLVIRGENTAK--VLRLISIALAAFRGHYIDRGYVEVLPPTFVQTQVEGGST--- 282

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   ++  +  ++  S +   +  + A     FC   ++R  +     H  E+  
Sbjct: 283 -----LFSLNYFGETAFMSQSSQLYLETCIPA-IGDCFCITRSYRAEKSRTRRHLSEYNH 336

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E       +  L+    +++              Q+ +      P++      F R   
Sbjct: 337 VEAECPFIDFNGLLNRIEDLVVDVC-----DRIVKQSGDLLLDVNPQFKPPKGPFKRLKY 391

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            D    L+N    +  L                 + D        ++   +G     +L 
Sbjct: 392 EDAIVQLNNLGITNEDLT-------------PFQFGDDIPEAPERRLVDTIGE--PVLLT 436

Query: 240 RYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
            +PA   +        DPR T   +L    +         +D I+   +      + ++I
Sbjct: 437 NFPAGLKAFYMLRTKGDPRLTDSVDLLVPGVGELVGGSMRMDNIDDLLK----GYKSEEI 492

Query: 299 YNETYPIDED---FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               Y    D   F           G  +GF+R    + G ++I +V   P 
Sbjct: 493 DPTPYYWYTDQRKF-----GTCPHGGYGLGFERFCTWLLGKDHIRDVCLYPR 539


>gi|120598881|ref|YP_963455.1| aspartyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166225431|sp|A1RJQ6|SYD_SHESW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120558974|gb|ABM24901.1| aspartyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 592

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R  + S++R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R               +      E   +T  EA  R+   D     +  + 
Sbjct: 246 VMAKTEEMMRGLFLE----------MLNVDLGEFPRMTYNEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + + A      +D    +
Sbjct: 295 VDIADLLKEVEFAVFSAPANDEEGRV 320



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKR 261
           +AG   +           +     E   G  +        P   +A         R +  
Sbjct: 414 KAGEDFSLLQGEWRPLWVVDFPMFEKINGNFHAVHHPFTAPRGVTAAELEANPANRVSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      + +   Q   F    +      +E        L  L    P  +
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVF----RILGITDDEAKEKFGFLLEALRYGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 GLAFGLDRIIMLMTGASSIRDVMAFP 555


>gi|113475986|ref|YP_722047.1| aspartyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|123056664|sp|Q112K0|SYD_TRIEI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110167034|gb|ABG51574.1| aspartyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 595

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 19/189 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    LL R+ +  ++R +   E  F+EI++  L   +P     ++           
Sbjct: 136 RRERMTRNLLLRHEVIKAIRRFLEDEQNFVEIETPILTRSTPEGARDYLVPSRVHP---- 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
              +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E
Sbjct: 192 --GEWFALPQSPQLFKQILMVSGFDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSQE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++++    ++    +              +       +T  EA  RY   D        +
Sbjct: 250 EILQLNEKLVAYIFQKVKG---------IDLPLPFPRLTYTEAMERY-GSDKPDVRFGLE 299

Query: 191 QPDRHLLYL 199
             D   L  
Sbjct: 300 LVDVSDLMK 308



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 38/133 (28%), Gaps = 11/133 (8%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              +    +              +P       +I        + ++L     E+      
Sbjct: 436 LLWVTDFPMFEWNEDEQRLEALHHPFTAPHPDDINDLKTARAQAYDLVFNGYEVGGGSLR 495

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLV 333
           +     Q   FE        I       D  F   L       P   GIA G DRLVML+
Sbjct: 496 IYQRDVQEKVFE-------AIGLSAQEADNKFGFLLEAFEYGTPPHGGIAYGLDRLVMLL 548

Query: 334 TGANNINEVIWTP 346
               +I +VI  P
Sbjct: 549 AVEESIRDVIAFP 561


>gi|251811034|ref|ZP_04825507.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875946|ref|ZP_06284813.1| aspartate--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251805452|gb|EES58109.1| aspartyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294971|gb|EFA87498.1| aspartate--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 588

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 24/201 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+    S+R+Y   N F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQTTRSIRQYLDNNGFFDIETPVLTKSTPEGARDYLVPSRVHEGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++    +++R   +       S              +T AEA  R+   D   T    +
Sbjct: 249 DIIAMGEDMLRKVVKDVKGIDVS---------GPFPRMTYAEAMDRF-GSDKPDTRFGME 298

Query: 191 QPDRHLLYLQAQQAGIRVAHD 211
             +   L    ++   +V  D
Sbjct: 299 LINVSQL---GKEMNFKVFKD 316



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRIKLAKELGLIDESKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKREDIEKLDTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q+  FE           +        L    
Sbjct: 470 ENVQANAYDIVLNGYELGGGSIRIHDGELQQKMFEVLG----FTNEQAQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+T   N+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRLVMLLTNRTNLRDTIAFP 558


>gi|146312080|ref|YP_001177154.1| aspartyl-tRNA synthetase [Enterobacter sp. 638]
 gi|166979990|sp|A4WBM3|SYD_ENT38 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145318956|gb|ABP61103.1| aspartyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 590

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 77/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYR------RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   +      RRP     L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKFRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVRELMEALVRSLWLDVKGVDLG----------DFPIMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKAVEFAVFSGPANDAKGRV 318



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 49/151 (32%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR---------YP----APESALANIYPADPRFTK 260
                S     K  P   I+     D          +P       +A       +     
Sbjct: 413 LGKDLSLTDEAKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSAKDMNADELKAAPETAIAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      +     Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHSGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|146293033|ref|YP_001183457.1| aspartyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166225429|sp|A4Y6S5|SYD_SHEPC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145564723|gb|ABP75658.1| aspartyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 592

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R  + S++R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R               +      E   +T  EA  R+   D     +  + 
Sbjct: 246 VMAKTEEMMRGLFLE----------MLNVDLGEFPRMTYNEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + + A      +D    +
Sbjct: 295 VDIADLLKEVEFAVFSAPANDEEGRV 320



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKR 261
           +AG   +           +     E   G  +        P   +A         R +  
Sbjct: 414 KAGEDFSLLQGEWRPLWVVDFPMFEKINGNFHAVHHPFTAPRGVTAAELEANPANRVSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      + +   Q   F    +      +E        L  L    P  +
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVF----RILGITDDEAKEKFGFLLEALRYGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 GLAFGLDRIIMLMTGASSIRDVMAFP 555


>gi|169806401|ref|XP_001827945.1| asparaginyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511651|sp|A9CTP8|SYNC_ENTBH RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|161779013|gb|EDQ31040.1| asparaginyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 458

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 106/342 (30%), Gaps = 39/342 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRA 61
           +       R  H  R  FL  +N +  +LR+++  N + EI   +L      G  T    
Sbjct: 139 LDLAHLGLRMPH--RILFLQAQNELLKALRKFYWNNNYTEITPPTLVQTQVEGGAT---- 192

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L   ++  +P YL  S +    + +A    K FC   ++R  +     H  EFT +
Sbjct: 193 ----LFKLNYYDQPAYLTQSSQLYL-ETVAPVVGKAFCIMPSYRAEKSKTSRHLSEFTHV 247

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E       +++LM     +IR       + I        N F              Y   
Sbjct: 248 EAELVDIQFDELMDQIEQLIRSTINEFYKNILPEIKKIDNDFQPVVLSDKQFKKITY--- 304

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                       +  + +L AQ        D    D  S    + +    G N    L R
Sbjct: 305 ------------EDAIHFLIAQNHKKTDNTDYQLGDDISDASEKFLLETYGENQPIFLIR 352

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P                T           +  +  E             +  +++ I +
Sbjct: 353 FPTDHKPFYVAKDQYGTQTCDLLFPGIGEIVGGSMRETNYNNLL------DGFKRENIDH 406

Query: 301 ETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINE 341
           E Y     +L           G  +GF+RL+M +    ++++
Sbjct: 407 EPY---SWYLDMAKFGPSPHGGYGLGFERLLMCLMKYKSVDQ 445


>gi|87123423|ref|ZP_01079274.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I
           [Synechococcus sp. RS9917]
 gi|86169143|gb|EAQ70399.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I
           [Synechococcus sp. RS9917]
          Length = 606

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 16/188 (8%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      R    L  R     + R +  +  FIE+++  L   +P      R +   
Sbjct: 129 RHRYLDLRRKRMNDNLRLRAHTIQTARRFLEDEGFIEVETPVLTRSTPEG---ARDYILP 185

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
             +     +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   +
Sbjct: 186 SRVCG--GEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQPEFTQLDMEMS 243

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               ++++     +I    +                      +T  +A  RY   D   T
Sbjct: 244 FMDQDEILDLNERLISSIWKAVKGVELP---------RPFPRMTWHDAMERY-GTDRPDT 293

Query: 186 LDNPDQPD 193
               +  +
Sbjct: 294 RYGMELTN 301



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 13/94 (13%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL 313
             + ++L    +EL      + D   QR   +     E + K++            +  L
Sbjct: 487 RAQAYDLVLNGLELGGGSLRIHDSALQRQVLKTIGLPEAEAKEQFG--------FLIEAL 538

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR+VML+ G  +I + I  P
Sbjct: 539 DMGAPPHGGLAFGLDRMVMLLAGEESIRDTIAFP 572


>gi|317968273|ref|ZP_07969663.1| aspartyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 607

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 63/187 (33%), Gaps = 18/187 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +      R    L  R     + R +  E  FIE+++  L   +P     +I     
Sbjct: 129 RHRYLDLRRERMNSNLRLRAQTIQTARRFLEEQGFIEVETPVLTRSTPEGARDYILPSRV 188

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                    +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 189 ------CGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQPEFTQLDMEM 242

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    EQ+++   ++I    +                      +T  EA  RY   D   
Sbjct: 243 SFMDQEQILELNESLIAAIWKSVKG---------IELPRPFPRLTWHEAMERY-GTDRPD 292

Query: 185 TLDNPDQ 191
           T    + 
Sbjct: 293 TRYGMEL 299



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 52/161 (32%), Gaps = 23/161 (14%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+  A  +  S  F  ++   +              +P       ++      + 
Sbjct: 421 LARELGMVKADGENDSWNFLWVVDFPMFEFNADENRYEALHHPFCAPNTDDLGSDPAAWA 480

Query: 260 KR--------FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPI 305
           +         ++L    +EL      + D   QR   E      +E   +     E   +
Sbjct: 481 ETLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLETVGLPLEEANAQFGFLMEALDM 540

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                      P   G+A G DR+VML+ G  +I + I  P
Sbjct: 541 ---------GAPPHGGLAFGVDRMVMLLAGEESIRDTIAFP 572


>gi|188527535|ref|YP_001910222.1| aspartyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|238691926|sp|B2UTL0|SYD_HELPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188143775|gb|ACD48192.1| aspartyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 577

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 93/348 (26%), Gaps = 26/348 (7%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  EN  + +    LQ           + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCSENDVMGVVEDLLQEIFKAIGHNISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSP----EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
            +        Y    P    E    ++     +             +          L  
Sbjct: 269 RMPYKEAMENYGSDKPDLRFELPLIEVGDCFMDSSNAIFSNIAQDPKNKR----IKALNV 324

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANID 181
             A   + + +   +    C            +      P  +       +         
Sbjct: 325 KGADAIFSRSVLKELEEFVCQFGAQGLAYLQIKEDGVKGPLVKFLSEKGLKNILEKTGAK 384

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILD 239
            G  +      D+ ++     +  ++VA   D    D  + + +                
Sbjct: 385 TGDIV-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAA 443

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P            +      +++    +EL      +     Q+  FEK         
Sbjct: 444 HHPFTMPKNIECKDLEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HE 499

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L  L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 500 EEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 67/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S   +M    ++++   +              N     + +   EA   Y 
Sbjct: 231 QIDAEMSFCSENDVMGVVEDLLQEIFKAIGH----------NISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNAIFSNIAQDPKNKRI 319


>gi|261343867|ref|ZP_05971512.1| aspartate--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568254|gb|EFB73789.1| aspartate--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 589

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 68/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +     F+++++  L   +P     ++            
Sbjct: 130 RRPDMSERLRTRAKITSFVRNFMDNEGFLDVETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGVDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMSAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +IR                          +T AEA  RY   D     +  + 
Sbjct: 244 VREVMERMIRNLWLEVKGVDLGN----------FPIMTFAEAMRRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    + A      +D    +
Sbjct: 293 VDVADIVKNVEFAVFSGPANDPKGRV 318



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S        +      +++     E+      +     Q+  F
Sbjct: 441 EGGLTAMHHPFTSPKDLSPEDLAKNPEDAVANAYDMVINGYEVGGGSVRIHRGEMQQTVF 500

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E+E +EK              L  L    P  +G+A G DRLVML+TG +NI +
Sbjct: 501 GILGITEEEQREKFG----------FLLDALKYGTPPHAGLAFGLDRLVMLLTGTDNIRD 550

Query: 342 VIWTP 346
           VI  P
Sbjct: 551 VIAFP 555


>gi|311694935|gb|ADP97808.1| aspartyl-tRNA synthetase [marine bacterium HP15]
          Length = 602

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 78/251 (31%), Gaps = 34/251 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           D   R R            L  R+ + S +R Y   N F+++++  L   +P     ++ 
Sbjct: 121 DVRLRYRFVDLRRPEMINRLRFRSRVTSYIRNYLDSNGFMDVETPILTRATPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT +
Sbjct: 181 PSRTHEGSFFALPQ------SPQLFKQLLMVSGVDRYYQIAKCFRDEDLRADRQPEFTQV 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    E LMK   ++IR   +   +                  +  AEA  RY   
Sbjct: 235 DIEASFIDEETLMKLNEDMIRALFKDVLEVELPS----------FPQMPYAEAMQRY-GS 283

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D        +  D + L              D    +          P  G      +D 
Sbjct: 284 DKPDLRIPLELLDVNDLVEGVDFKVFAGPAKDPKGRV-----AALRVPKGGELTRKQIDD 338

Query: 241 YPAPESALANI 251
           Y          
Sbjct: 339 YTKFVGIYGAK 349



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 59/181 (32%), Gaps = 8/181 (4%)

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             R    D        D+ +     L A +  I    D   S+     +++        +
Sbjct: 383 MERVGAEDGDIVFFGADKTNVVNEALGALRIKIGHDLDMLTSEWAPLWVVDFPMFEETPD 442

Query: 234 CCTILDRYP---APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +P      S            ++ +++     EL      + D   Q   F  
Sbjct: 443 GGLTAIHHPFTAPSCSPEDLAADPANALSRAYDMVLNGTELGGGSIRIHDEKMQEAVF-- 500

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +       E        L  L    P   G+A G DRLVML+TGA++I +VI  P +Q
Sbjct: 501 --RILGIGEEEARAKFGFLLDALKFGCPPHGGLAFGLDRLVMLMTGASSIRDVIAFPKTQ 558

Query: 350 S 350
           S
Sbjct: 559 S 559


>gi|294792128|ref|ZP_06757276.1| aspartate--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294793999|ref|ZP_06759136.1| aspartate--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455569|gb|EFG23941.1| aspartate--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294457358|gb|EFG25720.1| aspartate--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 601

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 69/200 (34%), Gaps = 17/200 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +  ++R++F    F+EI++  L   +P     ++            
Sbjct: 140 RRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYLVPSRVNAGTFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F     +R+ +     QPEFT L+   +    E 
Sbjct: 200 LPQ------SPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQPEFTQLDLEMSFVDEED 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    + A  K  S              IT  EA  +Y +       D    
Sbjct: 254 IYALLEEMIAHVFKTALGKEIS---------LPMPRITWDEAMDKYGSDKPDLRFDMAFT 304

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
               L+     +    V  +
Sbjct: 305 DVTDLVKDTEFKVFRSVIDN 324



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 47/160 (29%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       ++ +    + E  E              P            
Sbjct: 414 ELRLEMARRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++    +E+      +     Q   F+      +    E        L    
Sbjct: 474 GSVKAIAYDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIE----EARSKFGFMLDAFQ 529

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P  +G A G DRLVML+    +I +VI  P +QS  +
Sbjct: 530 YGAPPHAGCAFGLDRLVMLMAKRQSIRDVIAFPKTQSASD 569


>gi|88705602|ref|ZP_01103312.1| Aspartyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700115|gb|EAQ97224.1| Aspartyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 593

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  L  R+ +  ++R +     F++I++  L   +P     ++    T       
Sbjct: 132 RRPEMQQRLRLRSEVTDAVRRFLHGEGFLDIETPILTRATPEGARDYLVPSRTHP----- 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +      
Sbjct: 187 -GQFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFMDEAG 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    ++R   +                  +  ++T AEA  R+   D        + 
Sbjct: 246 IMEITERMVRGLFKAVLD----------VDLPDFPHMTWAEAMERF-GSDKPDLRIPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
                L  Q      R   DD    +
Sbjct: 295 VSVDDLMQQVDFKVFRGPADDPLGRV 320



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 8/122 (6%)

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
           G          PA + A    +P +   ++ +++     EL      + +   Q   F+ 
Sbjct: 444 GWTPLHHPFTAPACDLATLREHPGEA-LSRAYDMVLNGTELGGGSVRIHNLETQEAVFDI 502

Query: 291 EMQEKKKIY-NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  I   E        L  L    P   G+A G DR+VML++GA +I +VI  P +
Sbjct: 503 L-----GIDPEEAREKFGFLLDALKYGAPPHGGLAFGLDRIVMLMSGAASIRDVIAFPKT 557

Query: 349 QS 350
           Q+
Sbjct: 558 QT 559


>gi|254422068|ref|ZP_05035786.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196189557|gb|EDX84521.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 598

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
              R    +  R+ +  ++R +  +   F+E+++  L   +P      R F     + + 
Sbjct: 136 RRDRMAHNMRLRHEVVKAIRRFLEDQEDFMEVETPILTRSTPEG---ARDFILPSRVNE- 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   +    E+
Sbjct: 192 -GEWFALPQSPQLFKQILMVAGVDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMDQEE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                      +T  EA  RY   D   T    + 
Sbjct: 251 ILGLNEKLLAHIFKAVKGVDIP---------IPFPRLTYQEAMDRY-GSDKPDTRYGMEL 300

Query: 192 PD 193
            D
Sbjct: 301 VD 302



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 49/144 (34%), Gaps = 6/144 (4%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           D++ +D+         E N   N    L  +P       ++          +++     E
Sbjct: 430 DESKTDLLWVTDFPMFEWNADENRYEAL-HHPFTAPHPDDVEDLTTARAVAYDIVFNGYE 488

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRL 329
           +      +  P  Q   FE      +    E        L       P   GIA G DRL
Sbjct: 489 IGGGSLRIYQPDVQAKVFETIGLSSE----EANDKFGFLLEAFEYGTPPHGGIAYGLDRL 544

Query: 330 VMLVTGANNINEVIWTPFSQSNQE 353
           VML+ G  +I + I  P +Q  ++
Sbjct: 545 VMLLAGEQSIRDAIAFPKTQQARD 568


>gi|119476897|ref|ZP_01617178.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119449704|gb|EAW30941.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 590

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 78/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R            L  R+ + SS+R +  EN F++I++  L   +P     ++ 
Sbjct: 121 DVRLKYRYIDLRRPEMLEKLKLRSRVTSSIRRFMDENGFLDIETPILTKATPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT +
Sbjct: 181 PSRTHEGKFFALPQ------SPQLFKQLLMVSGMDRYYQIAKCFRDEDLRADRQPEFTQI 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +Q+M     +I+   +                  +  ++  AEA +R+   
Sbjct: 235 DIETSFMNDQQIMAITERMIQGLFKEVLDVDLG----------DFPHMPYAEAMSRF-GS 283

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D        +  D   L  Q          +D    +
Sbjct: 284 DKPDLRIPLELVDVDDLMRQVDFKVFNGPANDAKGRV 320



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 62/193 (32%), Gaps = 10/193 (5%)

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
           F   + IT   A     + D+     +        L     + G               +
Sbjct: 373 FMPEDIITQMMARLAVTDGDIVFFGADKTSIVNEALGALRVKVGEDQGLIKGDWAPLWVV 432

Query: 222 LIEKIEPNLGINCCTILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
                E N   N  ++   + AP  S  A     +   +  +++     EL      +  
Sbjct: 433 DFPMFEENSEGNLTSLHHPFTAPACSPEALEKNPEQALSIAYDMVLNGTELGGGSVRIHQ 492

Query: 281 PIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
              Q+  F      +       E        L  L    P   G+A G DRLVML+TGA 
Sbjct: 493 ADMQQAVF------RVLGISDEEAQEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGAK 546

Query: 338 NINEVIWTPFSQS 350
           +I +VI  P +QS
Sbjct: 547 SIRDVIAFPKTQS 559


>gi|26452525|dbj|BAC43347.1| putative aspartate--tRNA ligase [Arabidopsis thaliana]
          Length = 528

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 19/183 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R +  ++ R+ +   +R Y  +   FIEI++  L   +P     ++     +     
Sbjct: 75  RRQRMKNNIVLRHNVVKLIRRYLEDRHGFIEIETPILSRSTPEGARDYLVPSRIQSGTFY 134

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +  A  +R+ +     QPEFT L+   A    E
Sbjct: 135 ALPQ------SPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQPEFTQLDMEMAFMPME 188

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++K   ++IR                          +T A+A  RY   D   T  + +
Sbjct: 189 DMLKLNEDLIRKVFSEIKG---------IQLPDPFPRLTYADAMDRY-GSDRPDTRFDLE 238

Query: 191 QPD 193
             D
Sbjct: 239 LKD 241



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 16/142 (11%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           D +   I         E N        L  +P       ++          +++    +E
Sbjct: 368 DHSKHSILWVTDFPMFEWNEPEQRLEAL-HHPFTAPKPEDMDDLPSARALAYDMVYNGVE 426

Query: 271 LCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAM 324
           +      +     Q    E      +E + K     E   +           P   GIA 
Sbjct: 427 IGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDM---------GAPPHGGIAY 477

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           G DR+VM++ GA++I +VI  P
Sbjct: 478 GLDRMVMMLGGASSIRDVIAFP 499


>gi|229086966|ref|ZP_04219123.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696342|gb|EEL49170.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 591

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 67/190 (35%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMYNTFKMRHDVTKTIRNFLDSEEFLEVETPILTKSTPEGARDYLVPSRVHEGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++                      +    +  A+A ARY   D   T    + 
Sbjct: 249 ILEMMERMM---------TKVMKDAKGVEVHAPFPRMKYADAMARY-GSDKPDTRFAMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|160947632|ref|ZP_02094799.1| hypothetical protein PEPMIC_01567 [Parvimonas micra ATCC 33270]
 gi|158446766|gb|EDP23761.1| hypothetical protein PEPMIC_01567 [Parvimonas micra ATCC 33270]
          Length = 600

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L  + A++  +   ++     I    L E  E             +P  E         
Sbjct: 422 ALRCVIAKEMNLLNPNEYNLCWIVDFPLFEYDEEEKRYVSKHHPFTHPKDEDIKYLESNP 481

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +  + K +++     EL      + +   Q   F+     K+    ET       L  L 
Sbjct: 482 EKVYAKAYDIVINGDELGGGSIRINNSDLQNRMFKALGLTKE----ETEIKFGFLLEALK 537

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A G DRL+ML+ G NNI +VI  P +QS  +
Sbjct: 538 YGTPPHGGLAFGLDRLIMLLAGTNNIKDVIAFPKTQSASD 577



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 65/189 (34%), Gaps = 9/189 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPL 76
           +  L  R  +   +R+++ EN F+EI++  L   +P     ++            + +  
Sbjct: 153 QNNLKLRAKVCKVIRDFYTENNFVEIETPYLNKPTPEGARDYLVPSRVNPGNFYALPQ-- 210

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
               SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E ++   
Sbjct: 211 ----SPQIMKQLLMISGMDRYFQIVKCFRDEDLRANRQPEFTQVDLEMSFVDVEDVIDVN 266

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             +++   +                    E     +   R+   ++    D   + +  L
Sbjct: 267 ERMLKKLFKEIKGIDIELPIKRMKYDDAMEKYGSDKPDLRF-GFEIRNITDCVKEVEFDL 325

Query: 197 LYLQAQQAG 205
                   G
Sbjct: 326 FKNAIASGG 334


>gi|152990518|ref|YP_001356240.1| aspartyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422379|dbj|BAF69883.1| aspartyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 589

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 58/159 (36%), Gaps = 9/159 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  I    + E  E  + I        +P       +    
Sbjct: 408 RLRNEVAKKLGLIDHDRFEFVWIVDFPMFEIEEGEVKIKAL----HHPFTMPKNIDTEDY 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           +   ++ +++    +EL      +  P  Q+  FE           E        L  L 
Sbjct: 464 EAMTSQAYDIVLNGVELGGGSIRIHKPEIQKKIFEILGI----GDEEAKEKFGFLLDALK 519

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              P   G A+GFDRLVML+T  +NI +VI  P +Q  Q
Sbjct: 520 FGAPPHGGFALGFDRLVMLLTKRDNIRDVIAFPKTQKAQ 558



 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 74/193 (38%), Gaps = 26/193 (13%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLY 77
                R+ +  + R +  +N F+E+++  L   +P     ++            + +   
Sbjct: 138 NTFELRSKVAIAARNFLDKNGFLEVETPILTKSTPEGARDYLVPSRLYPGEFYALPQ--- 194

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +  + +++++   
Sbjct: 195 ---SPQLFKQLLMVAGFDRYFQIAKCFRDEDLRADRQPEFTQIDVEMSFCTEDEVIEVAE 251

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGTTLDNP 189
            +I+   E A  ++ +              +   EA  +Y          ++L   +D  
Sbjct: 252 GLIKSIFEAAGVEVKT----------PIRRMPYKEAMEKYGSDKPDLRFGLELVDVIDIF 301

Query: 190 DQPDRHLLYLQAQ 202
           +  +  +    AQ
Sbjct: 302 ENTELKVFRDIAQ 314


>gi|110801685|ref|YP_699209.1| aspartyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123341659|sp|Q0SRP8|SYD_CLOPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110682186|gb|ABG85556.1| aspartate--tRNA ligase [Clostridium perfringens SM101]
          Length = 597

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 21/200 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+    ++R+Y  +N F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 PGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQPEFTQVDLEMSFVEQDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I+   +                 +  + +T  +A  +Y   D        + 
Sbjct: 253 VMALNECLIKHVFKEVLGVDVK---------TPIKRMTFKDAMEKY-GSDKPDLRFGMEI 302

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    ++ G +V  D
Sbjct: 303 TN---LSDVVKECGFKVFTD 319



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 45/142 (31%), Gaps = 5/142 (3%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           ++   +  ++ I    L+E  E              P  E              K ++L 
Sbjct: 424 VKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIKYLDTDPGRVRAKAYDLV 483

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
               EL      + D   Q   FE     ++      +      L       P   G+A 
Sbjct: 484 LNGEELGGGSIRIHDTKLQEKMFEVLGFTQES----AWERFGFLLEAFKFGPPPHGGLAF 539

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           G DR++M + G  NI +VI  P
Sbjct: 540 GLDRMIMFLAGTENIKDVITFP 561


>gi|222151514|ref|YP_002560670.1| aspartyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254781739|sp|B9E706|SYD_MACCJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222120639|dbj|BAH17974.1| aspartyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 592

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 70/211 (33%), Gaps = 31/211 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R               R+ I  ++R Y  E+ F E+++  L   +P     ++ 
Sbjct: 124 DVRLKYRYLDLRREPLANTFKMRHQITRAVRNYLDESGFYEVETPVLTKSTPEGARDYLV 183

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
               +      + +      SP+   + L+  G +K +     +R+ +     QPEFT +
Sbjct: 184 PSRVQEGEFYALPQ------SPQIFKQLLMIGGFDKYYQIVKCFRDEDLRADRQPEFTQI 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    E +M     +++   +              +  +    +T  EA   Y  I
Sbjct: 238 DIEMSFVDQEDVMSMNEGMLKRIMKDVKG---------IDIATPFPRMTYEEAMRDY-GI 287

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
           D   T  +        L   A +   +V   
Sbjct: 288 DKPDTRFDMKLVT---LNDLASKMEFKVFKG 315



 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 50/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L     ++ G+   +   +  +    L E  E              P  E         
Sbjct: 409 NLRNKLGKELGLIDENKYNFLWVTDWPLFEYDEELDRYFAAHHPFTAPKKEHVEMLKTDK 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +      +++     EL      + D   Q+  FE           E        +    
Sbjct: 469 EKVQANAYDVVLNGYELGGGSIRIHDQEMQKKMFEALGFS----DEEAQEQFGFLMDAFK 524

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DR+VML++G +N+ +VI  P
Sbjct: 525 YGAPPHGGIALGLDRMVMLLSGRSNLRDVIAFP 557


>gi|219871764|ref|YP_002476139.1| aspartyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254781735|sp|B8F789|SYD_HAEPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219691968|gb|ACL33191.1| aspartyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 590

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R Y  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAERLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++      +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIAKCFRDEDLRADRQPEFTQIDVETTFMTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR            + +       E   +T AEA  RY   D     +  + 
Sbjct: 245 VRAMMEKMIRGL----------WLDRLNVDLGEFPQMTFAEAMRRY-GSDKPDLRNPLEL 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        +D    +
Sbjct: 294 VDVADILKDVEFKVFSGPANDPEGRV 319



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 43/126 (34%), Gaps = 17/126 (13%)

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                +        P   S    +          +++     E+      + DP  Q+  
Sbjct: 441 DEGNWSAMHHPFTAPKDLSPEELVQNPKGAVANAYDMVINGYEVGGGSVRIFDPKMQQTV 500

Query: 288 F------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           F      E+E +EK              L  L    P  +G+A G DRL ML+TG  NI 
Sbjct: 501 FGILGINEEEQKEKFG----------FLLDALKFGTPPHAGLAFGLDRLTMLITGTENIR 550

Query: 341 EVIWTP 346
           +VI  P
Sbjct: 551 DVIAFP 556


>gi|15835443|ref|NP_297202.1| aspartyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285624|ref|ZP_06195018.1| aspartyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289634|ref|ZP_06195936.1| aspartyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301337020|ref|ZP_07225222.1| aspartyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878783|sp|Q9PJK0|SYD_CHLMU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|7190856|gb|AAF39629.1| aspartyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 582

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 56/431 (12%), Positives = 107/431 (24%), Gaps = 108/431 (25%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRK--- 74
             L+ R+ +  + R+Y  E  F E+ +  L + +P     ++            + +   
Sbjct: 142 DRLMCRHKVMLACRQYLDEQGFTEVVTPVLGKSTPEGARDYLVPSRIYPGNFYALPQSPQ 201

Query: 75  -----------PLYLQTSPEF------------SCKKLLAAGEEKIFCFAHAWRN----- 106
                        Y Q +  F              +  +                     
Sbjct: 202 LFKQILMVGGLDRYFQIATCFRDEDLRADRQPEFSQIDMEMSFGGPEDLFPIVEELVTRL 261

Query: 107 ------------GEQGCLHQPEFTMLE-----WYRAHESYEQLMKDCMNIIRCAAEVANQ 149
                                EF   +     +    ++  +  K     I         
Sbjct: 262 FAVKGIELSIPFQRMTYQEAKEFYGTDKPDLRFGLRLKNCCEYAKKFSFSIFLDQLAQGG 321

Query: 150 KIFSFQNVNCNPFSEPEYITVAEAFARYA------------NID-----------LGTTL 186
            +  F        S  +     +   RY              I                 
Sbjct: 322 TVKGFCVPGGADISRKQLDVYTDFVKRYGAMGLVWIKNQDGGISSNVAKFASEEVFHEMF 381

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           +  +  D+ +L L A    I     D    + ++                 +  +P    
Sbjct: 382 EAFEAKDQDILLLIAAPEAIANQSLDHLRRLIAKERQLYDAEQYNF---VWITDFPLFAK 438

Query: 247 ALANIYPADPRFTKR-------------------FELYACNIELCNACDELLDPIEQRHR 287
               +      FT                     ++L     E+ +    + +P  Q   
Sbjct: 439 EEGELCSEHHPFTAPLEEDIPLLDKDPLSVRSSSYDLVLNGYEIASGSQRIHNPDLQNKI 498

Query: 288 F----EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           F      +   K+K           F+  L+   P   GIA+G DR++M++TGA  I EV
Sbjct: 499 FSLLRLSQESVKEKFG--------FFIDALSFGTPPHLGIALGLDRIMMVLTGAETIREV 550

Query: 343 IWTPFSQSNQE 353
           I  P +Q   +
Sbjct: 551 IAFPKTQKAGD 561


>gi|123967112|ref|YP_001012193.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166225375|sp|A2BZ75|SYD_PROM5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123201478|gb|ABM73086.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 602

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 69/193 (35%), Gaps = 28/193 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L  R+ I  ++R Y   + F E+++  L   +P      R 
Sbjct: 125 ELRLKYRYLDIRRGKLLENLKTRHKIIKAIRNYLDNSGFTEVETPLLTKSTPEG---ARD 181

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     + +      + L  SP+   + L+  G +K +  A  +R+ +     QPEFT L
Sbjct: 182 FLVPARLSNG---DFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQPEFTQL 238

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S E+++     +I+   +            N N   +   ++  EA   Y   
Sbjct: 239 DIEMSFVSEEEIIAFNEKLIKHIWKNVL---------NINLNEDFPRMSWQEAMDNY-GT 288

Query: 181 DLGTTLDNPDQPD 193
           D   T       +
Sbjct: 289 DRPDTRYGMLLKN 301



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 44/147 (29%), Gaps = 14/147 (9%)

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI---YPADPRFTKRFE 263
           +      +  I    + E  E              P               +      ++
Sbjct: 431 KAQSQWNFLWITDFPMFEMNEEEKRFEALHHPFCSPKNVKFEDKKELTKKIETSTAYAYD 490

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQS 319
           L    +EL      +     Q+          + +    + IDE F   +  L    P  
Sbjct: 491 LVLNGLELGGGSLRIHQAEMQKEVL-------RTVGLTDHQIDEKFGFLIEALEMGAPPH 543

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            GIA G DR+ ML+ G ++I E I  P
Sbjct: 544 GGIAFGLDRITMLILGVDSIRETIAFP 570


>gi|242056369|ref|XP_002457330.1| hypothetical protein SORBIDRAFT_03g005710 [Sorghum bicolor]
 gi|241929305|gb|EES02450.1| hypothetical protein SORBIDRAFT_03g005710 [Sorghum bicolor]
          Length = 507

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 74/183 (40%), Gaps = 19/183 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              + +  L  R+ +   +R Y   E++F+EI++  L   +P     ++     +     
Sbjct: 52  RRPQMQSNLRLRHNVVKLIRRYLEDEHEFVEIETPVLSKSTPEGARDYLVPSRVQPGTFY 111

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G EK +  A  +R+ +     QPEFT L+   A  S E
Sbjct: 112 ALPQ------SPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQPEFTQLDMEIAFTSME 165

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++K   +++R   +V           +    +    +T AEA  RY   D      + +
Sbjct: 166 DMLKLNEDLMRHVFQVVG---------DIKLPNPFPRLTYAEAMDRY-GTDRPDLRFDWE 215

Query: 191 QPD 193
             D
Sbjct: 216 LKD 218



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 15/125 (12%)

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                        +P       ++          +++    +E+      +     Q+  
Sbjct: 361 EWNSDEQRYEALHHPFTAPNPEDMNDLPSARALAYDMIYNGVEIGGGSLRIYKSDVQQRI 420

Query: 288 FE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINE 341
           FE      ++ +EK     E + +           P   GIA G DRLVML+ G ++I +
Sbjct: 421 FEIIGISPEQAEEKFGYLLECFDM---------GAPPHGGIAYGLDRLVMLLAGESSIRD 471

Query: 342 VIWTP 346
           VI  P
Sbjct: 472 VIAFP 476


>gi|15613815|ref|NP_242118.1| aspartyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|20139936|sp|Q9KDG1|SYD_BACHD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|10173868|dbj|BAB04971.1| aspartyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 595

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 62/188 (32%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +  R+     +R++    +F EI++  L   +P     ++            
Sbjct: 135 RRPDMQETMKLRHQTTKLIRDFLDGQEFFEIETPMLTKSTPEGARDYLVPSRVHHGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ +     +R+ +     QPEFT ++   +    E 
Sbjct: 195 LPQ------SPQIFKQLLMVSGFERYYQIVRCFRDEDLRADRQPEFTQIDIETSFMDKED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L+    N++    +                      +T  +A  RY +    T  +    
Sbjct: 249 LLTMTENMMAKIMKEVKGLDV---------ALPFPRMTYDDAMNRYGSDKPDTRFEMELI 299

Query: 192 PDRHLLYL 199
               ++  
Sbjct: 300 ELSDIVKD 307



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 44/158 (27%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +       +  +    L+E  E              P  E         
Sbjct: 409 ALRLKLGKDFNLIDESKFNFLWVVDFPLVEYDEEAKRFVALHHPFTSPKQEDLTKLETDP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF-----EKEMQEKKKIYNETYPIDEDF 309
                  ++L     EL      +     Q   F      +E  +K+             
Sbjct: 469 ASVRADAYDLVLNGYELGGGSQRIYQRPVQEKMFAALGFTEEAAQKEFG---------FL 519

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L       P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 520 LEAFEYGTPPHGGIALGLDRLVMLLAGRLNLRDTIAFP 557


>gi|326803472|ref|YP_004321290.1| aspartate--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651322|gb|AEA01505.1| aspartate--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 589

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 75/195 (38%), Gaps = 9/195 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R +  +  R+ +  ++R +  ++ F++I++  L   +P     ++            
Sbjct: 134 RRQRMQDNIRLRSQVTHAIRSFLDQDGFLDIETPYLSKSTPEGARDYLVPSRVHPGEFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+A+G ++ +     +R+ +     QPEFT ++   +  S E+
Sbjct: 194 LPQ------SPQLLKQLLMASGFDRYYQIVRCFRDEDLRGDRQPEFTQVDLETSFLSQEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     N+++   +       +      +           +   R+  ++L    D  DQ
Sbjct: 248 IRDIVENMLKAVMKQVKGLDMTEDFPVISYDEAMSRYGSDKPDTRF-GLELVDLSDIVDQ 306

Query: 192 PDRHLLYLQAQQAGI 206
            D  +  +  +  GI
Sbjct: 307 YDFKVFNMAIENGGI 321



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 50/151 (33%), Gaps = 13/151 (8%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR----F 258
           + G  +   D     F  ++   +              +P       ++   +      +
Sbjct: 411 KFGRELDLMDNNQFNFLWVVDWPLLEYNADEKRYTAMHHPFTMPNEEDLDRLESEPESVY 470

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--TYPIDEDFLACL-TE 315
           ++ +++     E+      +     Q          K   ++E          L  L   
Sbjct: 471 SQAYDIVLNGYEIGGGSIRIHQKEVQLAML------KALGFSEEKANQQFGFLLDALDYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   G+A+G DRLVML+ G +NI EV+  P
Sbjct: 525 FPPHGGLAIGLDRLVMLIAGEDNIREVMAFP 555


>gi|33862244|ref|NP_893805.1| aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|46577193|sp|Q7UZH8|SYD_PROMP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33634462|emb|CAE20147.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 598

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 70/192 (36%), Gaps = 26/192 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L  R+ I  ++REY   + F E+++  L   +P      R 
Sbjct: 125 ELRLKYRYLDLRRGKLLKNLKTRHKIIKAVREYLDNSGFTEVETPLLTKSTPEG---ARD 181

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     + +   +   L  SP+   + L+  G +K +  A  +R+ +     QPEFT L+
Sbjct: 182 FLVPARLSN--GEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQPEFTQLD 239

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  S E+++     +I+   +            N N   E   +T  EA   Y   D
Sbjct: 240 IEMSFISEEEIISFNEKLIKNVWKNVL---------NINFNEEFPRMTWQEAMDNY-GTD 289

Query: 182 LGTTLDNPDQPD 193
              T       +
Sbjct: 290 RPDTRYEMLLKN 301



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 44/155 (28%), Gaps = 16/155 (10%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES---ALANIYPADP 256
            A+   +       +  +    + E  E              P       +       + 
Sbjct: 420 IAKDLKLIEKDKWNFLWVTDFPMFEMNEEEKRFEALHHPFCSPKNIKLEDSKELKEKIES 479

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLAC 312
                ++L    +EL      +     QR         + Q  +K            +  
Sbjct: 480 STAHAYDLVLNGLELGGGSLRIHQAEMQREVLRTVGLTDNQINEKFG--------FLIEA 531

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA G DR+ ML+ G ++I E I  P
Sbjct: 532 LEMGAPPHGGIAFGVDRITMLILGEDSIRETIAFP 566


>gi|112832|sp|P10723|SYNC_BRUMA RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS; AltName:
           Full=Potentially protective 63 kDa antigen
 gi|156057|gb|AAA27852.1| 63 kd antigen [Brugia malayi]
          Length = 548

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 103/322 (31%), Gaps = 41/322 (12%)

Query: 32  LREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
           +RE+F    ++E+   +L      G  T        L   D+  +  +L  S +   +  
Sbjct: 255 MREHFYNAGYLEVAPPTLVQTQVEGGST--------LFNLDYFGEQSFLTQSSQLYLETC 306

Query: 90  LAAGEEKIFCFAHAWRNGEQGCLH-QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA- 147
           +      +F      + G+        E+  +E      + + LM+    ++    +   
Sbjct: 307 IP-TLGDVFLHCSVLQGGKISHSSTLAEYAHVEAECPFITLDDLMEKIEELVCDTVDRLL 365

Query: 148 -NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
            +++           F  PE       F R    D              + +LQ      
Sbjct: 366 ADEEAKKLLEHINPKFQPPER-----PFLRMEYKD-------------AIKWLQEHNVEN 407

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELY 265
              +  T+ +  +      +     IN   +L+R+P+   +        D   T+  +L 
Sbjct: 408 EFGNTFTYGEDIAEAAERFMTDT--INKPILLNRFPSEIKAFYMQRDAQDNTLTESVDLL 465

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
              +       E++    +  +F++  +  K +  +  P        L       G  +G
Sbjct: 466 MPGV------GEIVGGSMRIWKFDELSKAFKNVEIDPKPYYWYLDQRLYGTCPHGGYGLG 519

Query: 326 FDRLVMLVTGANNINEVIWTPF 347
            +R +  +T  N+I +V   P 
Sbjct: 520 LERFICWLTNTNHIRDVCLYPR 541


>gi|228960676|ref|ZP_04122320.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228798982|gb|EEM45955.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 591

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 71/201 (35%), Gaps = 28/201 (13%)

Query: 13  DFHYR------RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   +      RRP        R+ +  ++R +    +F+E+++  L   +P     ++ 
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 184 PSRVHDGEFYALPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQI 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + ++++     ++    + A     S         +    +  A+A ARY   
Sbjct: 238 DIEASFLTQDEILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GS 287

Query: 181 DLGTTLDNPDQPDRHLLYLQA 201
           D   T    +  D        
Sbjct: 288 DKPDTRFEMELTDLSEFAADC 308



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDANRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|212711940|ref|ZP_03320068.1| hypothetical protein PROVALCAL_03015 [Providencia alcalifaciens DSM
           30120]
 gi|212685462|gb|EEB44990.1| hypothetical protein PROVALCAL_03015 [Providencia alcalifaciens DSM
           30120]
          Length = 589

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 77/229 (33%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  +  F+++++  L   
Sbjct: 109 PLDSNQTNTEERRLKYRYLDLRRPEMSDRLRTRAKITSFVRNFMDKEGFMDVETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  + EQ+ +    +IR                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAEQVREVMERMIRNLWIDVKGVDLG----------DFPIMTF 272

Query: 171 AEAFARYAN--IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY +   DL   ++  D  D       A  AG         + +
Sbjct: 273 AEAMRRYGSDKPDLRNPMELVDVADIVKDVEFAVFAGPANDPKGRVAAL 321



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 48/145 (33%), Gaps = 19/145 (13%)

Query: 211 DDTWSDIFSRILIEKIEPNL--GINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
           D         I     E N   G+         P   +        +      +++    
Sbjct: 421 DLNSWQPLWVIDFPMFEENGEGGLTAMHHPFTSPKDFTPEDLARNPEDAVANAYDMVING 480

Query: 269 IELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
            E+      +     Q+  F      E+E +EK              L  L    P  +G
Sbjct: 481 YEVGGGSVRIHRSEMQQTVFGILGINEEEQREKFG----------FLLDALKYGTPPHAG 530

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           +A G DRLVML+TG +NI +VI  P
Sbjct: 531 LAFGLDRLVMLLTGTDNIRDVIAFP 555


>gi|319644799|ref|ZP_07999032.1| aspartyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|317392608|gb|EFV73402.1| aspartyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 592

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 76/226 (33%), Gaps = 18/226 (7%)

Query: 11  NRDFHYR-RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFS 63
            +  +   RRP     L  R+ +  ++R +  +N F++I++  L   +P     ++    
Sbjct: 128 LKHRYLDLRRPEMFNSLKMRHNVTKAVRRFLDDNGFLDIETPVLTKSTPEGARDYLVPSR 187

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                   + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++  
Sbjct: 188 VHEGEFYALPQ------SPQIFKQLLMVSGFDRYYQIARCFRDEDLRADRQPEFTQIDIE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  S E +MK    ++       +    S      +           +   R+  +   
Sbjct: 242 MSFMSQEDIMKLSEEMMAHVMRETHGIEISLPLPRMSYEDAMNRYGSDKPDTRFGMLLTD 301

Query: 184 TTLDNPDQPDRHLLYLQA-----QQAGIRVAHDDTWSDIFSRILIE 224
            +    D   +      A     +   ++ A  +        +   
Sbjct: 302 VSEAVKDSDFKVFASAVANGGAVKAINVKGAAANYSRKDIDALGEF 347



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 57/178 (32%), Gaps = 21/178 (11%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCTIL 238
           D    L   D+ +     L A +  +    +     +F+ +      +            
Sbjct: 390 DGDLLLFVADKLEVVNDALGALRLKLGKELNLIDESLFNFLWVVDWPLLEYDAEEGRYYA 449

Query: 239 DRYPAPESALANIY----PADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------ 288
             +P       ++            + ++L     EL      + +   Q   F      
Sbjct: 450 AHHPFTMPVREDLKLIETNPQDMKAQAYDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFS 509

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E+E +E+     E +             P   GIA+G DRLVML++G  N+ + I  P
Sbjct: 510 EEEAKEQFGFLLEAFD---------YGAPPHGGIALGLDRLVMLLSGRTNLRDTIAFP 558


>gi|161507425|ref|YP_001577379.1| aspartyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160348414|gb|ABX27088.1| Aspartyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 617

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 8/196 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I  +  E+F EN FI+I++  L + SP     ++            
Sbjct: 136 RRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMEMSFADEKT 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +              +           +   RY  +    +    D 
Sbjct: 250 IQDYTEGLLKKIMKDVKGIDLKTPIKRISWTDSMNKYGCDKPDTRYGMLIHDLSPIFKDS 309

Query: 192 PDRHLLYLQAQQAGIR 207
             +      A    ++
Sbjct: 310 DFKVFSGAIADGGFVK 325



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++  I       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAKETDIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                + +++     E+      +     Q   F      K   + E    ++    L  
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEDMF------KALGFTEKRAYEQFGYLLDA 523

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P  +G+A+G DR  M++   +NI +V+  P
Sbjct: 524 LDMGFPPHAGLAIGLDRFAMMLADKDNIRDVLAFP 558


>gi|33864480|ref|NP_896040.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|46577196|sp|Q7V3X1|SYD_PROMM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33641260|emb|CAE22390.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 606

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 69/207 (33%), Gaps = 21/207 (10%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +         R    L  R+    + R +  +  FIE+++  L   +P     ++     
Sbjct: 129 RHRHLDLRRERMSRNLQLRHTTIKTARHFLEDEGFIEVETPVLTRSTPEGARDYLVPSRV 188

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                    +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 189 ------CSGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQPEFTQLDIEM 242

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    EQ++K    +I    +              +       +T  EA  RY   D   
Sbjct: 243 SFMDQEQILKLNERLIAAIWKAVKG---------IDLPLPFPRLTWHEAMDRY-GTDRPD 292

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHD 211
           T    +  D   +    +  G +V   
Sbjct: 293 TRYGMELND---VSDILKDMGFKVFSG 316



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 27/183 (14%)

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +  +   ++   +LG    + D      L+         +  ++   +          + 
Sbjct: 412 SALDRVRQFLGRELGLIPTDQDNKLWQFLW-VVDFPMFELNAEENRLEALHHPFCAPNKD 470

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +LG +    ++R P                 + ++L    +EL      + +   QR   
Sbjct: 471 DLGDDPDAWMERLPQA-------------RAQAYDLVLNGLELGGGSLRIHNAELQRQVL 517

Query: 289 EK----EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           +       + K++            +  L    P   G+A G DR+VML+TG ++I + I
Sbjct: 518 QTIGLPLEEAKQQFG--------FLIDALEMGAPPHGGLAFGMDRIVMLLTGEDSIRDTI 569

Query: 344 WTP 346
             P
Sbjct: 570 AFP 572


>gi|318605496|emb|CBY26994.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 598

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGVDLGDFPVMTFAEAMRRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVESKVFSGPANDAKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G++        P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLSAMHHPFTAPKDMSPEQLAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQQVF 500

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E+E +EK              L  L    P  +G+A G DRLVML+TG +NI +
Sbjct: 501 GILGINEEEQREKFG----------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRD 550

Query: 342 VIWTP 346
           VI  P
Sbjct: 551 VIAFP 555


>gi|312084588|ref|XP_003144336.1| hypothetical protein LOAG_08758 [Loa loa]
 gi|307760499|gb|EFO19733.1| hypothetical protein LOAG_08758 [Loa loa]
          Length = 444

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 58/343 (16%), Positives = 116/343 (33%), Gaps = 41/343 (11%)

Query: 15  HYRRRPF-----LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R +       L  R+ +    R +F E  FI +D+  L ++          F+ +   
Sbjct: 126 HLRMKSIPFMCLLRLRSRLDQLSRSFFQEESFIHVDTPLLTHNDCEGAG--DVFTVQTNR 183

Query: 69  QDHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH 126
            ++   + +YL  S +   +  +     K++  A A R        H  EF MLE   A 
Sbjct: 184 GNYFGDQAVYLPVSSQLHLESFV-GSLPKVYTIAPALRADNSQTRQHLAEFRMLEAEYAF 242

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
                 ++   +++          + S      +   +           + A +     +
Sbjct: 243 AD---DLEQLCDLVERYVNYVVDGMLSCDTAEIDSMMQV-------FCDKSAKVQSLLWI 292

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           + P +P   + Y +A    ++   + T    FS+     +  +        + RYP  + 
Sbjct: 293 NGPRKPFPRIHYDEAIAV-LQSKGEMTSGGRFSKENELTMVQHC--TGPLFVLRYPHIQK 349

Query: 247 ALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                   +  + + F+L A  + EL        D  E R R            + +  +
Sbjct: 350 PFYMKRCGN--YAECFDLLAPFVGELAGGSLRESDSEELRRR----------GCDNS--L 395

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           D  +L       P S+G  +G +R +  + G  NI + +  P 
Sbjct: 396 DW-YLEMRQHGHPTSAGFGIGLERFMQTLFGILNIKDTVAFPR 437


>gi|189485338|ref|YP_001956279.1| aspartyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|226736547|sp|B1GZY6|SYD_UNCTG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|170287297|dbj|BAG13818.1| aspartyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 584

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 65/182 (35%), Gaps = 16/182 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +   + R+ I   +R +  E  F+EI++  L   +P      R F     +    
Sbjct: 133 RRPNLQKNFVMRHKISKEIRNFLNEEGFLEIETPFLTKSTPEG---ARDFLVPSRLHH-- 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L++AG +K +     +R+ +     QPEFT ++   +    E +
Sbjct: 188 GNFFALPQSPQLFKQILMSAGFDKYYQIVRCFRDEDLRADRQPEFTQVDVEMSFVDEEDV 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     ++                +N +     E +  +EA  R+   D   T    +  
Sbjct: 248 MVVIERMLA---------RVFKMTLNLDIKMPFERMPYSEAMLRF-GSDKPDTRFEVEIK 297

Query: 193 DR 194
           D 
Sbjct: 298 DF 299



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 52/160 (32%), Gaps = 6/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +++G+   +   +  +    L+E  +              P   +       A
Sbjct: 406 ALRLKVGRESGLIDKNKFNFLWVVDFPLMEWDKEEQRWQALHHPFTLPKD-ADSLTKENA 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++    IEL      +     Q+  F                     L  L 
Sbjct: 465 GRAKAKAYDVVLNGIELGGGSIRIHKSGIQKKIF----NILDISDESAEKKFGFLLKALT 520

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G A+GFDRL  L++G ++I EVI  P +Q   +
Sbjct: 521 YGAPPHGGAALGFDRLCALISGEDSIREVIAFPKTQKAVD 560


>gi|87300554|ref|ZP_01083396.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284425|gb|EAQ76377.1| aspartyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 606

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 64/195 (32%), Gaps = 18/195 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +      R    L  R     + R +  +  FIE+++  L   +P     ++     
Sbjct: 129 RHRYLDLRRERMNGNLRLRARTIQAARRFLEDQGFIEVETPVLTRSTPEGARDYLVPSRV 188

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                    +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 189 ------CGGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQPEFTQLDIEM 242

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    E++++    +I    +                      ++  EA  RY   D   
Sbjct: 243 SFMGQEEILELNEALIASIWKAVKGVELP---------RPFPRLSWHEAMERY-GTDRPD 292

Query: 185 TLDNPDQPDRHLLYL 199
           T    +  +   L  
Sbjct: 293 TRYGMELTNVSDLVA 307



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 15/157 (9%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+  A  D  +  F  ++   +              +P       ++     ++ 
Sbjct: 421 LARELGLVPADRDNDTWNFLWVVDFPMFEFNAGENRLEALHHPFCAPNPDDLGNDPAQWA 480

Query: 260 KR--------FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL- 310
           +         ++L    +EL      + D   QR     ++ +   +  E       FL 
Sbjct: 481 ETLPTARAQAYDLVLNGLELGGGSLRIHDSALQR-----QVLQTIGLPLEEAERQFGFLM 535

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G+A G DR+VML+ G  +I + I  P
Sbjct: 536 EALDLGAPPHGGLAFGVDRMVMLLAGEESIRDTIAFP 572


>gi|86606337|ref|YP_475100.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|97196955|sp|Q2JTZ2|SYD_SYNJA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|86554879|gb|ABC99837.1| aspartyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 601

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 67/183 (36%), Gaps = 19/183 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +  ++R +   E  FIE+++  L   +P     ++           
Sbjct: 144 RRERLSRNLQLRHQVIKAIRRFLEDEEGFIEVETPILTRSTPEGARDYLVPSRVNP---- 199

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
              +   L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   +    E
Sbjct: 200 --GEWFALPQSPQLFKQLLMVAGVDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMDQE 257

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +++    ++    +              +       +T AEA ARY   D   T    +
Sbjct: 258 AILELNERLLCHIFKTVKG---------IDLPRPFPRLTYAEAMARY-GSDKPDTRFGLE 307

Query: 191 QPD 193
             D
Sbjct: 308 LVD 310



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 15/113 (13%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQ 293
            +P       ++        + ++L    +E+      +     Q   F+      ++ +
Sbjct: 465 HHPFTAPHPDDLADLKTARAQAYDLVWNGVEVGGGSLRIYQREIQEQVFQTIGLTPEQAR 524

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +K     E +             P   GIA G DRLVML+ G ++I +VI  P
Sbjct: 525 DKFGFLLEAFE---------YGTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFP 568


>gi|52081234|ref|YP_080025.1| aspartyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786614|ref|YP_092443.1| aspartyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|62287542|sp|Q65GR4|SYD_BACLD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52004445|gb|AAU24387.1| aspartyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349116|gb|AAU41750.1| AspS [Bacillus licheniformis ATCC 14580]
          Length = 592

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 76/226 (33%), Gaps = 18/226 (7%)

Query: 11  NRDFHYR-RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFS 63
            +  +   RRP     L  R+ +  ++R +  +N F++I++  L   +P     ++    
Sbjct: 128 LKHRYLDLRRPEMFNSLKMRHNVTKAVRRFLDDNGFLDIETPVLTKSTPEGARDYLVPSR 187

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                   + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++  
Sbjct: 188 VHEGEFYALPQ------SPQIFKQLLMVSGFDRYYQIARCFRDEDLRADRQPEFTQIDIE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  S E +MK    ++       +    S      +           +   R+  +   
Sbjct: 242 MSFMSQEDIMKLSEEMMAHVMRETHGIEISLPLPRMSYEDAMNRYGSDKPDTRFGMLLTD 301

Query: 184 TTLDNPDQPDRHLLYLQA-----QQAGIRVAHDDTWSDIFSRILIE 224
            +    D   +      A     +   ++ A  +        +   
Sbjct: 302 VSEAVKDSDFKVFASAVANGGAVKAINVKGAAANYSRKDIDALGEF 347



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 57/178 (32%), Gaps = 21/178 (11%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCTIL 238
           D    L   D+ +     L A +  +    +     +F+ +      +            
Sbjct: 390 DGDLLLFVADKLEVANDALGALRLKLGKELNLIDESLFNFLWVVDWPLLEYDAEEGRYYA 449

Query: 239 DRYPAPESALANIY----PADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------ 288
             +P       ++            + ++L     EL      + +   Q   F      
Sbjct: 450 AHHPFTMPVREDLKLIETNPQDMKAQAYDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFS 509

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E+E +E+     E +             P   GIA+G DRLVML++G  N+ + I  P
Sbjct: 510 EEEAKEQFGFLLEAFD---------YGAPPHGGIALGLDRLVMLLSGRTNLRDTIAFP 558


>gi|329769593|ref|ZP_08260998.1| aspartyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838545|gb|EGF88152.1| aspartyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 590

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 23/197 (11%)

Query: 4   IPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET 57
           + S+    +  +   R       L  R+ I  + R+Y   N F+++++  L   +P    
Sbjct: 122 LSSEELRLKYRYLDLRRTELAEVLQLRSKITKATRDYLDNNMFVDVETPILTKSTPEGAR 181

Query: 58  -HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            ++            + +      SP+   + L+ AG ++ +  A  +R+ +     QP+
Sbjct: 182 DYLVPSRVHPGEFYALPQ------SPQLFKQLLMVAGFDRYYQVARCFRDEDLRADRQPD 235

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT ++   +  S E+++     +I    +              +       +   EA  R
Sbjct: 236 FTQIDMEMSFMSQEEILTMIEGLIAHVMKEVKG---------IDVVLPFPRLDYEEAMER 286

Query: 177 YANIDLGTTLDNPDQPD 193
           +   D   T  + +  D
Sbjct: 287 F-GSDKPDTRFDMELKD 302



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A    +       +  + +  L+E  E     +        P  E         
Sbjct: 411 ALRQKLAADLDLIDKDKYNYLWVVNWPLLEYDEEKGRYSAAHHPFTMPKEEDVELLETAP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--TYPIDEDFLAC 312
           +  + + +++     EL      + D   Q   F      K   + E          L  
Sbjct: 471 EKAYAQAYDIVLNGYELGGGSIRIYDKEIQSSMF------KALGFTEEQAQEQFGFLLDA 524

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               +P   G A+G DR VML+ G +N+ + I  P
Sbjct: 525 FEYGVPPHGGCALGLDRFVMLLAGRDNLRDTIAFP 559


>gi|228993140|ref|ZP_04153062.1| Aspartyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228999190|ref|ZP_04158771.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228760535|gb|EEM09500.1| Aspartyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228766599|gb|EEM15240.1| Aspartyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 591

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 67/190 (35%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMYNTFKMRHDVTKTIRNFLDSEEFLEVETPILTKSTPEGARDYLVPSRVHEGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++                      +    +  A+A ARY   D   T    + 
Sbjct: 249 ILEMMERMM---------TKVMKDAKGVEVRAPFPRMKYADAMARY-GSDKPDTRFAMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAADC 308



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|293400601|ref|ZP_06644746.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305627|gb|EFE46871.1| aspartate--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 581

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 71/203 (34%), Gaps = 28/203 (13%)

Query: 11  NRDFHYR------RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
             D   +      RRP     L+ R+ I  S+REY     FIEI++  L   +P     +
Sbjct: 115 LEDTRLKYRYLDLRRPIMQNKLMMRHKITHSMREYLDSKDFIEIETPMLGRSTPEGARDY 174

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G E+ + FA  +R+ +     Q +FT
Sbjct: 175 LVPSRVHPGSFYALPQ------SPQLYKQLLMVSGFERYYQFARCFRDEDLRADRQTDFT 228

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S  ++      +++   +       S              +T  EA  RY 
Sbjct: 229 QVDLETSFLSDVEIQTMMEEMLQKLMKDVKGMDIS---------IPFPRLTWEEAMNRY- 278

Query: 179 NIDLGTTLDNPDQPDRHLLYLQA 201
             D        +  D   L+   
Sbjct: 279 GSDKPDNRFAMELQDITELFTNC 301



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 13/148 (8%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G++   + ++  +    + E  E +            P  E                ++
Sbjct: 410 LGLKKKDEFSYLWVTDFPMFEYSEEDGRWYAMHHPFTRPRDEDMQYIDTDPGKVHAIAYD 469

Query: 264 LYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           +     EL      + D   Q   FE     E + ++            F+  L    P 
Sbjct: 470 VVLNGYELGGGSLRIYDGAMQDKMFEVLGFTEEKIQENFG--------WFVDALKYGTPP 521

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A G DR+ M+++ +++I +VI  P
Sbjct: 522 HGGLAFGLDRIAMILSESDSIRDVIAFP 549


>gi|238762973|ref|ZP_04623940.1| Aspartyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698731|gb|EEP91481.1| Aspartyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 598

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 72/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGVDLGDFPVMTFAEAMRRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + +        +D    +
Sbjct: 293 VDVADLVKEVEFKVFSGPANDAKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLTAMHHPFTAPKDMSPEQLAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQQVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 GILGINEHEQREKFG--------FLLDALKYGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|30022478|ref|NP_834109.1| aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|46577218|sp|Q817X8|SYD_BACCR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29898036|gb|AAP11310.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 14579]
          Length = 591

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTCFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAADC 308



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|205374220|ref|ZP_03227019.1| aspartyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 591

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ + +S+R Y  +  F ++++  L   +P     ++            
Sbjct: 135 RRPEMIETFKMRHQVTTSIRNYLNDQGFYDVETPMLTKSTPEGARDYLVPSRVHEGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S E+
Sbjct: 195 LPQ------SPQIFKQLLMVSGFDRYYQIVRCFRDEDLRADRQPEFTQIDMEMSFMSQEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++    ++++   +                 +E   +T  EA +RY   D   T    + 
Sbjct: 249 IVALMEDMMKQLMKEVKGVDLP---------AEFPRMTYDEAMSRY-GSDKPDTRFAMEL 298

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 299 IDVAEIVK 306



 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+  +    +  +    L E  E              PA           
Sbjct: 409 ALRLKLAKELGLIDSSKFNFLWVTDWPLFEYDEEEGRYYAAHHPFTMPAAADVDKLTSDP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L     EL      +     Q   FE     K+    E        L    
Sbjct: 469 RNVRAEAYDLVLNGYELGGGSLRIYQRDIQEKMFEVLGFSKE----EAKEQFGFLLEAFE 524

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 525 YGTPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 557


>gi|73662438|ref|YP_301219.1| aspartyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|97196920|sp|Q49Y68|SYD_STAS1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|72494953|dbj|BAE18274.1| aspartyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 588

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 21/197 (10%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+    S+R+Y  +  F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTFKMRHQTTRSIRQYLDKEGFFDIETPVLTKSTPEGARDYLVPSRVHDGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQIFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDIEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M     +++   +                      +T  EA  RY   D   T    +
Sbjct: 249 DVMDMGEEMLQNVVKDVKDVEIP---------RPFPRMTYNEAMERY-GSDKPDTRFEME 298

Query: 191 QPDRHLLYLQAQQAGIR 207
             +   L  +      +
Sbjct: 299 LINVSELGEEMDFKVFK 315



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 46/154 (29%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    L+E  E              P  E         
Sbjct: 410 ALRLKLARELDLIDESKLNFLWVTDWPLLEYDEDLKRYTAAHHPFTAPKQEDIEKLDSEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
           +      +++     EL      + +   Q   FE           E         L   
Sbjct: 470 ENAQANAYDVVLNGYELGGGSIRIHNGELQAKMFEVL-----GFTEEQAQEQFGFLLDAF 524

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA+G DRLVML+TG  N+ + I  P
Sbjct: 525 KYGAPPHGGIALGLDRLVMLLTGRTNLRDTIAFP 558


>gi|117920398|ref|YP_869590.1| aspartyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166225430|sp|A0KWL5|SYD_SHESA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|117612730|gb|ABK48184.1| aspartyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 591

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R  + S++R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R               +      E   +T  EA  R+   D     +  + 
Sbjct: 246 VMAKTEEMMRGLFLE----------MLNVDLGEFPRMTYNEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + + A      +D    +
Sbjct: 295 VDVADLLKEVEFAVFSGPANDEEGRV 320



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 48/146 (32%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKR 261
           +AG      +        +     E   G  +        P   +          R +  
Sbjct: 414 KAGEDFNLLEGQWRPLWVVDFPMFEKINGSFHAVHHPFTAPRGVTPQELEANPANRVSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      + +   Q   F    +       E        L  L    P  +
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVF----RILGITDEEAKEKFGFLLEALRYGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 GLAFGLDRIIMLMTGASSIRDVMAFP 555


>gi|227817181|ref|YP_002817190.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|254781714|sp|C3L608|SYD_BACAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|227007021|gb|ACP16764.1| aspartate--tRNA ligase [Bacillus anthracis str. CDC 684]
          Length = 591

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 71/201 (35%), Gaps = 28/201 (13%)

Query: 13  DFHYR------RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   +      RRP        R+ +  ++R +    +F+E+++  L   +P     ++ 
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 184 PSRVHDGEFYALPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQI 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + ++++     ++    + A     S         +    +  A+A ARY   
Sbjct: 238 DIEASFLTQDEILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GS 287

Query: 181 DLGTTLDNPDQPDRHLLYLQA 201
           D   T    +  D        
Sbjct: 288 DKPDTRFEMELTDLSEFAAGC 308



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|206969547|ref|ZP_03230501.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229180679|ref|ZP_04308019.1| Aspartyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|206735235|gb|EDZ52403.1| aspartyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228602824|gb|EEK60305.1| Aspartyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 591

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 71/201 (35%), Gaps = 28/201 (13%)

Query: 13  DFHYR------RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   +      RRP        R+ +  ++R +    +F+E+++  L   +P     ++ 
Sbjct: 124 DVRLKYRYLDLRRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 184 PSRVHDGEFYALPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQI 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + ++++     ++    + A     S         +    +  A+A ARY   
Sbjct: 238 DIEASFLTQDEILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GS 287

Query: 181 DLGTTLDNPDQPDRHLLYLQA 201
           D   T    +  D        
Sbjct: 288 DKPDTRFEMELTDLSEFAAGC 308



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 45/151 (29%), Gaps = 13/151 (8%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRF 258
           + G  +   D     F  +    +              +P       ++       +   
Sbjct: 413 RLGKELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKAR 472

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-E 315
            + ++L     EL      + +   Q   F      K   +   E        L      
Sbjct: 473 AQAYDLVLNGYELGGGSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYG 526

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 527 TPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 557


>gi|323210669|gb|EFZ95547.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
          Length = 410

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    + A      +D    +
Sbjct: 273 AEAERRY-GSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRV 318


>gi|302036777|ref|YP_003797099.1| aspartyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|190343193|gb|ACE75581.1| aspartyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300604841|emb|CBK41174.1| Aspartyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 587

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 75/203 (36%), Gaps = 25/203 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R +  L  R+ I  ++R +    QF+E+++  L   +P     ++        +   
Sbjct: 135 RRPRMQRLLGLRHGIMQAVRTFLNAEQFLEVETPVLTKSTPEGARDYLVPSRVNPGMFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    EQ
Sbjct: 195 LPQ------SPQLFKQVLMVSGVDRYYQIARCFRDEDLRNDRQPEFTQIDLEMSFVDREQ 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD- 190
           +M     +I    + A               +    +T A+A  RY +       D P  
Sbjct: 249 VMSLMERMIVSVFKDAGGVQLP---------TPFPRMTYADAMGRYGSDKPDLRFDLPLH 299

Query: 191 -------QPDRHLLYLQAQQAGI 206
                  + D  +    A + G+
Sbjct: 300 DVTAFAAKSDFKVFKEAATKGGL 322



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 17/96 (17%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLA 311
             K +++     E+            Q          +++ Q K              L 
Sbjct: 470 RAKAYDMVLNGSEIGGGSIRNHRSDIQFRILDLLGIGKEQAQAKFG----------FLLE 519

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   GIA G DRL+ML+ GA++I +VI  P
Sbjct: 520 ALEYGAPPHGGIAFGLDRLIMLLGGADSIRDVIAFP 555


>gi|149194524|ref|ZP_01871620.1| aspartyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135268|gb|EDM23748.1| aspartyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 588

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 77/214 (35%), Gaps = 28/214 (13%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R             + R+ +  ++R+YF +  FI++++  L   +P     +
Sbjct: 119 NEELRLKYRYLDLRDKNSLETFILRSKVVKAIRDYFDKEGFIDVETPILTKSTPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT
Sbjct: 179 LVPSRIYPGEFYALPQ------SPQLFKQILMVAGFDKYYQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  + + ++K    +I+ A EVA                  + I+  EA  +Y 
Sbjct: 233 QVDVEMSFVTQDDVIKTIEGMIKEAFEVAG----------IKVDLPIKRISYKEAMEKYG 282

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
           +       D               +    +A D 
Sbjct: 283 SDKPDLRFDLAMVDVIDEFVDSNNEIFSEIAKDK 316



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 20/165 (12%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+  G+    +  +  +    + EK E     N       +P     +      
Sbjct: 407 RLRIKIAKDMGLINEDEYNFVWVVDFPMFEKDE-----NNNPTPLHHPFTMPDMGTWDEE 461

Query: 255 DPR--FTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDED 308
           +     +  ++L     E+      +     Q   F+     EM+ ++K           
Sbjct: 462 NFEDINSIAYDLVLNGYEIGGGSIRIHKEEIQEKVFKLLGIDEMEAREKFG--------F 513

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            L  L    P   G A+G DR++ML+   +NI +VI  P +Q  Q
Sbjct: 514 LLDALKFGAPPHGGFALGLDRVIMLMRKTDNIRDVIAFPKTQKAQ 558


>gi|260101664|ref|ZP_05751901.1| aspartate-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260084524|gb|EEW68644.1| aspartate-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|328467648|gb|EGF38703.1| aspartyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 617

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 8/196 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I  +  E+F EN FI+I++  L + SP     ++            
Sbjct: 136 RRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMEMSFADEKT 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +              +           +   RY  +    +    D 
Sbjct: 250 IQDYTEGLLKKIMKDVKGIDLKTPIKRISWTDSMNKYGCDKPDTRYGMLIHDLSPIFKDS 309

Query: 192 PDRHLLYLQAQQAGIR 207
             +      A    ++
Sbjct: 310 DFKVFSGAIADGGFVK 325



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++  I       +  I    L E  E              P  E         
Sbjct: 410 HLRREFAKETDIIPKGVYDFVWIVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                + +++     E+      +     Q   F      K   + E    ++    L  
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEDMF------KALGFTEKRAYEQFGYLLDA 523

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P  +G+A+G DR  M++   +NI +V+  P
Sbjct: 524 LDMGFPPHAGLAIGLDRFAMMLADKDNIRDVLAFP 558


>gi|167623848|ref|YP_001674142.1| aspartyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082142|sp|B0TSA3|SYD_SHEHH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167353870|gb|ABZ76483.1| aspartyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 598

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 85/249 (34%), Gaps = 21/249 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R+ + S++R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMADRIVFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S +Q
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSDQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R   +                  E   +T  EA  R+   D     +  + 
Sbjct: 246 VMAKTEEMVRGLFQELL----------NVDLGEFPKMTFEEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSD--IFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
            D   +  + + A      +D      + S     K+           +  Y A   A  
Sbjct: 295 IDVADIVKEVEFAVFNGPANDPEGRVAVLSIPGGAKLSRKQLDEYAKYVTIYGAKGLAWM 354

Query: 250 NIYPADPRF 258
            +   D   
Sbjct: 355 KVNDLDKGM 363



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 7/147 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNL--GINCCTILDRYPAPESALANIYPADPRFTK 260
           +AG               +     E     G++        P+  +            + 
Sbjct: 414 KAGEDFDLLQGEWKPLWVVDFPMFERTSDGGLHAMHHPFTAPSNMTPEELEANPIAAISD 473

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            +++     EL      + D   Q   F    +       E        L  L    P  
Sbjct: 474 AYDMVLNGCELGGGSVRIHDSKMQSAVF----RILGINDEEATEKFGFLLEALRYGTPPH 529

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
           +G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 AGLAFGLDRIIMLMTGASSIRDVMAFP 556


>gi|153000827|ref|YP_001366508.1| aspartyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217973216|ref|YP_002357967.1| aspartyl-tRNA synthetase [Shewanella baltica OS223]
 gi|166225427|sp|A6WNQ6|SYD_SHEB8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781750|sp|B8EA71|SYD_SHEB2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|151365445|gb|ABS08445.1| aspartyl-tRNA synthetase [Shewanella baltica OS185]
 gi|217498351|gb|ACK46544.1| aspartyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 592

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 75/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R  + SS+R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAQRLIFRAKVTSSVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S EQ
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R               +      E   +T  EA  R+   D     +  + 
Sbjct: 246 VMAKTEEMMRGLFLE----------MLNVDLGEFPRMTYNEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + + A      +D    +
Sbjct: 295 VDIADLLKEVEFAVFSGPANDEEGRV 320



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 48/146 (32%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKR 261
           +AG               +     E   G  +        P   +A         R +  
Sbjct: 414 KAGEDFNLLQGEWRPLWVVDFPMFEKINGNFHAVHHPFTAPRGVTAAELEANPANRVSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      + +   Q   F    +       E        L  L    P  +
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVF----RILGITDEEAKEKFGFLLEALRYGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 GLAFGLDRIIMLMTGASSIRDVMAFP 555


>gi|160875535|ref|YP_001554851.1| aspartyl-tRNA synthetase [Shewanella baltica OS195]
 gi|304408867|ref|ZP_07390488.1| aspartyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307302870|ref|ZP_07582625.1| aspartyl-tRNA synthetase [Shewanella baltica BA175]
 gi|189082141|sp|A9L3I1|SYD_SHEB9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160861057|gb|ABX49591.1| aspartyl-tRNA synthetase [Shewanella baltica OS195]
 gi|304352688|gb|EFM17085.1| aspartyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306913230|gb|EFN43652.1| aspartyl-tRNA synthetase [Shewanella baltica BA175]
 gi|315267723|gb|ADT94576.1| aspartyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 592

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 75/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R  + SS+R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAQRLIFRAKVTSSVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S EQ
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R               +      E   +T  EA  R+   D     +  + 
Sbjct: 246 VMAKTEEMMRGLFLE----------MLNVDLGEFPRMTYNEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + + A      +D    +
Sbjct: 295 VDIADLLKEVEFAVFSGPANDEEGRV 320



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 48/146 (32%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKR 261
           +AG               +     E   G  +        P   +A         R +  
Sbjct: 414 KAGEDFNLLQGEWRPLWVVDFPMFEKINGNFHAVHHPFTAPRGVTAAELEANPANRVSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      + +   Q   F    +       E        L  L    P  +
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVF----RILGITDEEAKEKFGFLLEALRYGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 GLAFGLDRIIMLMTGASSIRDVMAFP 555


>gi|156053|gb|AAA27849.1| 63kd antigen [Brugia malayi]
          Length = 548

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 103/322 (31%), Gaps = 41/322 (12%)

Query: 32  LREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
           +RE+F    ++E+   +L      G  T        L   D+  +  +L  S +   +  
Sbjct: 255 MREHFYNAGYVEVAPPTLVQTQVEGGST--------LFNLDYFGEQSFLTQSSQLYLETC 306

Query: 90  LAAGEEKIFCFAHAWRNGEQGCLH-QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA- 147
           +      +F      + G+        E+  +E      + + LM+    ++    +   
Sbjct: 307 IP-TLGDVFLHCSVLQGGKISHSSTLAEYAHVEAECPFITLDDLMEKIEELVCDTVDRLL 365

Query: 148 -NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
            +++           F  PE       F R    D              + +LQ      
Sbjct: 366 ADEEAKKLLEHINPKFQPPER-----PFLRMEYKD-------------AIKWLQEHNVEN 407

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELY 265
              +  T+ +  +      +     IN   +L+R+P+   +        D   T+  +L 
Sbjct: 408 EFGNTFTYGEDIAEAAERFMTDT--INKPILLNRFPSEIKAFYMQRDAKDNTLTESVDLL 465

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
              +       E++    +  +F++  +  K +  +  P        L       G  +G
Sbjct: 466 MPGV------GEIVGGSMRIWKFDELSKAFKNVEIDPKPYYWYLDQRLYGTCPHGGYGLG 519

Query: 326 FDRLVMLVTGANNINEVIWTPF 347
            +R +  +T  N+I +V   P 
Sbjct: 520 LERFICWLTNTNHIRDVCLYPR 541


>gi|113970236|ref|YP_734029.1| aspartyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123130420|sp|Q0HIZ5|SYD_SHESM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|113884920|gb|ABI38972.1| aspartyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 591

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R  + S++R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R               +      E   +T  EA  R+   D     +  + 
Sbjct: 246 VMAKTEEMMRGLFLE----------MLNVDLGEFPRMTYNEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + + A      +D    +
Sbjct: 295 VDVADLLKEVEFAVFSGPANDEEGRV 320



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 48/146 (32%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKR 261
           +AG      +        +     E   G  +        P   +          R +  
Sbjct: 414 KAGEDFNLLEGQWRPLWVVDFPMFEKINGSFHAVHHPFTAPRGVTPQELEANPANRVSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      + +   Q   F    +       E        L  L    P  +
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVF----RILGITDEEAKEKFGFLLEALRYGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 GLAFGLDRIIMLMTGASSIRDVMAFP 555


>gi|126174260|ref|YP_001050409.1| aspartyl-tRNA synthetase [Shewanella baltica OS155]
 gi|166225426|sp|A3D477|SYD_SHEB5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|125997465|gb|ABN61540.1| aspartyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 592

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 75/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R  + SS+R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAQRLIFRAKVTSSVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S EQ
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R               +      E   +T  EA  R+   D     +  + 
Sbjct: 246 VMAKTEEMMRGLFLE----------MLNVDLGEFPRMTYNEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + + A      +D    +
Sbjct: 295 VDIADLLKEVEFAVFSGPANDEEGRV 320



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 49/146 (33%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKR 261
           +AG   +           +     E   G  +        P   +A         R +  
Sbjct: 414 KAGEDFSLLQGEWRPLWVVDFPMFEKINGNFHAVHHPFTAPRGVTAAELEANPANRVSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      + +   Q   F    +       E        L  L    P  +
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVF----RILGITDEEAKEKFGFLLEALRYGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 GLAFGLDRIIMLMTGASSIRDVMAFP 555


>gi|328716987|ref|XP_001945425.2| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           isoform 1 [Acyrthosiphon pisum]
 gi|328716989|ref|XP_003246090.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           isoform 2 [Acyrthosiphon pisum]
          Length = 478

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 47/361 (13%), Positives = 102/361 (28%), Gaps = 46/361 (12%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI-RA 61
            +  H R R       L  R+ + S++R  F E+ FIEI++  L  +      E    + 
Sbjct: 133 RQHLHIRPRTATFSSLLRLRDKLSSAVRNRFAEDNFIEINAPVLSSNDCEGAGEVFAVKP 192

Query: 62  ----------FSTELIIQDHI-RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
                             +       YL  S +    + +A    K++     +R     
Sbjct: 193 DSEKLVKEMISKDHQSPMEAFFNGQTYLTVSGQMHL-ECMARALTKVYTLGPTFRAENSK 251

Query: 111 CL-HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E  +A     +     ++ I        +++    +     +      +
Sbjct: 252 SRLHLSEFYMIEAEQAFIDNTEE---LLSSIEKTTSTVVKQLLENSSDEIGHYRNIIGAS 308

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
                    N+                  +  ++   +  +        ++     +   
Sbjct: 309 KDNDPVNMVNVPYEVISYQ------KACDVLEKENCFK--NSMIRGKPLAKEHELFLVKY 360

Query: 230 LGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHR 287
            G     ++  +P           P +       +L   N+ ELC       D    +  
Sbjct: 361 NGQKPIFVV-DWPKDLKPFYTKAIPNNKSLVYAVDLLCPNVGELCGGSVREDDYDVLKE- 418

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                +       +       +L         ++G  +GF+R + ++    NI + I  P
Sbjct: 419 -----KLSFAGLEDKLH---WYLELRKFGNVSTAGFGIGFERFLQVLLDVQNIKDTIAFP 470

Query: 347 F 347
            
Sbjct: 471 R 471


>gi|238018959|ref|ZP_04599385.1| hypothetical protein VEIDISOL_00819 [Veillonella dispar ATCC 17748]
 gi|237864443|gb|EEP65733.1| hypothetical protein VEIDISOL_00819 [Veillonella dispar ATCC 17748]
          Length = 605

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +  ++R++F    F+EI++  L   +P     ++            
Sbjct: 144 RRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYLVPSRVNAGTFYA 203

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F     +R+ +     QPEFT L+   +    E 
Sbjct: 204 LPQ------SPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQPEFTQLDLEMSFVDEED 257

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +    K                 IT  EA  +Y +       D    
Sbjct: 258 IYSMLEEMIAHVFKTTLGKEIPLSM---------PRITWDEAMDKYGSDKPDLRFDMAFT 308

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
               L+     +    V  +
Sbjct: 309 DVTDLVKDTEFKVFRSVIDN 328



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 50/164 (30%), Gaps = 13/164 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       ++ +    + E  E              P  E         
Sbjct: 418 ELRLEMARRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHEDLDKLESDP 477

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  +++    +E+      +     Q   F+     E + K K            L
Sbjct: 478 GSVKAIAYDMVLNGVEIGGGSLRIYQSDVQEKVFKAIGLSEEEAKSKFG--------FML 529

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  P  +G A G DRLVML+    +I +VI  P +QS  +
Sbjct: 530 DAFQYGAPPHAGCAFGLDRLVMLMAKRQSIRDVIAFPKTQSASD 573


>gi|254516712|ref|ZP_05128771.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219675135|gb|EED31502.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 570

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  L  R+ +  ++R +  E  F++I++  L   +P     ++    T       
Sbjct: 109 RRPEMQQRLRLRSRVTDAVRRFLHEEGFLDIETPILTRATPEGARDYLVPSRTHP----- 163

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +      
Sbjct: 164 -GQFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLDEAA 222

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    ++R   +                     ++T AEA  R+   D        + 
Sbjct: 223 IMEITERMVRGLFQSVLDVELPS----------FPHMTWAEAMERF-GSDKPDLRIPLEL 271

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
                L  Q      R   DD    +
Sbjct: 272 VSVDDLMQQVDFKVFRGPADDPLGRV 297



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 6/123 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           N G          PA + +  + +P +   ++ +++     EL      + +   Q   F
Sbjct: 419 NGGWTPLHHPFTAPACDLSTLSQHPGEA-LSRAYDMVLNGTELGGGSVRIHNLETQEAVF 477

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +    +++    E        L  L    P   G+A G DR+VML+TG+ +I +VI  P 
Sbjct: 478 DILGIDRE----EAREKFGFLLDALKYGAPPHGGLAFGLDRIVMLMTGSASIRDVIAFPK 533

Query: 348 SQS 350
           +Q+
Sbjct: 534 TQT 536


>gi|190566955|ref|ZP_03019871.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|190561946|gb|EDV15915.1| aspartyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
          Length = 592

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 41/137 (29%), Gaps = 14/137 (10%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVT-GANNINEVIWTP 346
           ML+  G  N+ + I  P
Sbjct: 542 MLLAGGRTNLRDTIAFP 558


>gi|167636507|ref|ZP_02394804.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|254684158|ref|ZP_05148018.1| aspartyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254741543|ref|ZP_05199230.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167528100|gb|EDR90897.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0442]
          Length = 591

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 42/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +        C     +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADCYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|24373980|ref|NP_718023.1| aspartyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|38372526|sp|Q8EEE9|SYD_SHEON RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24348431|gb|AAN55467.1|AE015684_4 aspartyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 591

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 77/208 (37%), Gaps = 20/208 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R  + S++R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M     ++R               +      E   +T  EA  R+ +   DL   L+  
Sbjct: 246 VMNKTEEMMRGLFLE----------MLNVDLGEFPRMTYNEAMRRFGSDKPDLRNPLELV 295

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D  D       A  +G     +   + +
Sbjct: 296 DVADLLKDVEFAVFSGPANDEEGRVAAL 323



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 48/146 (32%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKR 261
           +AG      +        +     E   G  +        P   +          R +  
Sbjct: 414 KAGEDFNLLEGQWRPLWVVDFPMFEKINGSFHAVHHPFTAPRGVTPQELEANPANRVSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      + +   Q   F    +       E        L  L    P  +
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVF----RILGITDEEAKEKFGFLLEALRYGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 GLAFGLDRIIMLMTGASSIRDVMAFP 555


>gi|321475859|gb|EFX86821.1| hypothetical protein DAPPUDRAFT_307813 [Daphnia pulex]
          Length = 421

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 117/358 (32%), Gaps = 40/358 (11%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI-RA 61
            +  H R +       L   ++I ++L+   +++ F+ + +  L  +      E  + R 
Sbjct: 78  RQQIHLRPKTNIYSAILRLSSLITNALQTTLIQDNFVSVFTPILTSNDCEGAGEVFLTRP 137

Query: 62  FSTEL---------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GC 111
            S E+         + + +  K +YL  S +    + +A G  K+F     +R+      
Sbjct: 138 ASDEMCREMGGNRKLEESYFNKKVYLTVSGQLHL-EAIAGGISKVFTLGPTFRSENSRSR 196

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF MLE   A       ++  ++ I    + + + I     ++     +     + 
Sbjct: 197 RHLAEFRMLEAEIAF---CNDLQPILSTIESLVKHSAKVILEHGALDLITVGKYYNENLE 253

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E+                    R  + L               +DI S   +  ++   G
Sbjct: 254 ESLNEVL------KSPFTTISYREAMELLLNNRDSFKTPPRDEADIGSEHELFLVKHMGG 307

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
               T L  +PA           D        L +C   L     EL     + +R++  
Sbjct: 308 ---PTFLVDWPAKIKPFYMRTNNDDN-----SLVSCVDLLVPGVGELCGGSLRENRYDIL 359

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
               + +  E       +L         + G  MG +RL+  +    N+ +++  P +
Sbjct: 360 KSRLESLNLEESL--SWYLDLRKYGGSPTGGFGMGVERLISYLLKIPNVKDIVPFPRT 415


>gi|229111875|ref|ZP_04241421.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|296504895|ref|YP_003666595.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228671631|gb|EEL26929.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|296325947|gb|ADH08875.1| aspartyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 591

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAADC 308



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|226311477|ref|YP_002771371.1| aspartyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|226094425|dbj|BAH42867.1| aspartyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 596

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 70/188 (37%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  LL R+    + R+Y  EN F+EI++  LQ  +P     ++            
Sbjct: 137 RRPEMQRSLLLRSKAAKAFRDYLDENNFMEIETPILQKSTPEGARDYLVPSRVHPGEFYA 196

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 197 LPQ------SPQLFKQLLMVSGLERYYQIARCFRDEDLRADRQPEFTQVDIETSFLSMEE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                 +    +T A+A ARY   D        + 
Sbjct: 251 ILPMMEKMVAHVFKQTVGVDVP---------TPFPRLTYADAMARY-GSDKPDVRFGMEL 300

Query: 192 PDRHLLYL 199
            D   L  
Sbjct: 301 TDVSDLVA 308



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 49/164 (29%), Gaps = 13/164 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRSKLGAELGLIDQSQFAFLWVVDFPLVEWDEDAKRYVALHHPFTRPKDEDLHLFDTDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFL 310
                + +++     EL      +     Q   F        + +K+            +
Sbjct: 470 GQMRAQAYDMVLNGYELGGGSMRIFKREVQEKMFTTLGFTPEEARKQFG--------FLM 521

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  P   GIA+G DRL+ML+ G  N+ EVI  P + S  +
Sbjct: 522 DAFEYGTPPHGGIALGLDRLIMLLAGRTNLREVIAFPKTASASD 565


>gi|229081667|ref|ZP_04214162.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228701671|gb|EEL54162.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 591

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 45/151 (29%), Gaps = 13/151 (8%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRF 258
           + G  +   D     F  +    +              +P       ++       +   
Sbjct: 413 RLGKELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKAR 472

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-E 315
            + ++L     EL      + +   Q   F      K   +   E        L      
Sbjct: 473 AQAYDLVLNGYELGGGSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYG 526

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 527 TPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 557


>gi|229192614|ref|ZP_04319575.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590921|gb|EEK48779.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 591

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|302501169|ref|XP_003012577.1| hypothetical protein ARB_01190 [Arthroderma benhamiae CBS 112371]
 gi|291176136|gb|EFE31937.1| hypothetical protein ARB_01190 [Arthroderma benhamiae CBS 112371]
          Length = 556

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 113/393 (28%), Gaps = 57/393 (14%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS 52
           + Q+P         H R R          R+     + E F  +    F+++    +  S
Sbjct: 168 LRQLP---------HLRLRTPFNALLSRLRSEFIYQVTEEFRSHRDLNFVQVQPPLITSS 218

Query: 53  ---PGNETH-IRAFST---ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                 E   IR       E    +  + P YL  S +   +   AA    ++  +  +R
Sbjct: 219 DCEGAGEVFSIRPRDVVIEEGKAVEFFKSPKYLTVSSQLHLEAY-AAELGNVWTLSPTFR 277

Query: 106 NGEQG-CLHQPEFTMLEWYRAHESY-EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
             +     H  EF MLE   ++    E L      ++R   +   +   + +  +     
Sbjct: 278 AEKSDTPRHLSEFYMLEVEMSYMDSLEPLTAFVETLLRNMTQRVYKSPVAQEIFSFKATD 337

Query: 164 EPEYITVAEAFARYAN--IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
           +    T      +     I+               L+       +      +WS      
Sbjct: 338 DLTKDTTNAHLEKRWMALIEGPRWPRITFAHAIKHLHEAVNTGLVTFDFSPSWSGGLQLE 397

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
             + +   +G      +  YP        + P+     +  E  AC   L     E++  
Sbjct: 398 HEKFLVDTIGKGLPIFVTDYPKAVKPFYML-PSSGSSNESGETVACFDLLLPEICEVVGG 456

Query: 282 IEQRHRF---------EKEMQEKKKIYNETYPIDE-----DFLACLT------------- 314
             + HR             ++ K      +  +D        LA                
Sbjct: 457 SLREHRLSPLIRNMREHGLLKLKDSTPEPSSAVDAKAPYPHLLANEELGSIQWYADLRRW 516

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 G  +GFDR V  + G +++ +++  P 
Sbjct: 517 GTVPHGGFGLGFDRFVGYLAGVSSLRDLVPFPR 549


>gi|229048112|ref|ZP_04193683.1| Aspartyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229129683|ref|ZP_04258651.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229146974|ref|ZP_04275336.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228636471|gb|EEK92939.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653800|gb|EEL09670.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228723215|gb|EEL74589.1| Aspartyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 591

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAADC 308



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|167855752|ref|ZP_02478507.1| aspartyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853149|gb|EDS24408.1| aspartyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 589

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 69/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R Y  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMAERLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++      +  +
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETTFMTAPE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR            + +       E   +T AEA  RY   D     +  + 
Sbjct: 244 VRAMMEKMIRGL----------WLDRLNVDLGEFPQMTFAEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        +D    +
Sbjct: 293 VDVADILKDVEFKVFSGPANDPEGRV 318



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 43/126 (34%), Gaps = 17/126 (13%)

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                +        P   S    +          +++     E+      + DP  Q+  
Sbjct: 440 DEGNWSAMHHPFTAPKDLSPEELVQNPKGAVANAYDMVINGYEVGGGSVRIFDPKMQQTV 499

Query: 288 F------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           F      E+E +EK              L  L    P  +G+A G DRL ML+TG  NI 
Sbjct: 500 FGILGINEEEQKEKFG----------FLLDALKFGTPPHAGLAFGLDRLTMLITGTENIR 549

Query: 341 EVIWTP 346
           +VI  P
Sbjct: 550 DVIAFP 555


>gi|18310915|ref|NP_562849.1| aspartyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|110801288|ref|YP_696612.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168214147|ref|ZP_02639772.1| aspartyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168215558|ref|ZP_02641183.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|169343591|ref|ZP_02864590.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|24212407|sp|Q8XJ28|SYD_CLOPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123344612|sp|Q0TP28|SYD_CLOP1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|18145597|dbj|BAB81639.1| aspartate-tRNA ligase [Clostridium perfringens str. 13]
 gi|110675935|gb|ABG84922.1| aspartyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|169298151|gb|EDS80241.1| aspartyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|170714389|gb|EDT26571.1| aspartyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|182382184|gb|EDT79663.1| aspartyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 597

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 21/200 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+    ++R+Y  +N F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 PGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQPEFTQVDLEMSFVEQDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I+   +                 +  + +T  +A  +Y   D        + 
Sbjct: 253 VMALNEGLIKHVFKEVLGVDVK---------TPIKRMTFKDAMEKY-GSDKPDLRFGMEI 302

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    ++ G +V  D
Sbjct: 303 TN---LSDVVKECGFKVFTD 319



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 45/142 (31%), Gaps = 5/142 (3%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           ++   +  ++ I    L+E  E              P  E              K ++L 
Sbjct: 424 VKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIKYLDTDPGRVRAKAYDLV 483

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
               EL      + D   Q   FE     ++      +      L       P   G+A 
Sbjct: 484 LNGEELGGGSIRIHDTKLQEKMFEVLGFTQES----AWERFGFLLEAFKFGPPPHGGLAF 539

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           G DR++M + G  NI +VI  P
Sbjct: 540 GLDRMIMFLAGTENIKDVITFP 561


>gi|313906015|ref|ZP_07839368.1| tRNA synthetase class II (D K and N) [Eubacterium cellulosolvens 6]
 gi|313469128|gb|EFR64477.1| tRNA synthetase class II (D K and N) [Eubacterium cellulosolvens 6]
          Length = 594

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 50/444 (11%), Positives = 114/444 (25%), Gaps = 117/444 (26%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            +   +  ++ R+ I + LR+  +E+ F+EI +  L   SP     ++            
Sbjct: 133 RNPEVKNKIVLRSQITAELRKSMIEHGFLEITTPILTCSSPEGARDYLVPSRNFPGKFYA 192

Query: 72  IRK--------------PLYLQTSP--------------EFSC---------KKLLAAGE 94
           + +                Y Q +P              EF           ++ +    
Sbjct: 193 LPQAPQQFKQLLMTSGFDRYFQIAPCFRDEDARADRSPGEFYQLDMEMAFADQEDVFEVL 252

Query: 95  EKIF-----CFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ 149
           E +       +       +   +  P    L+ Y   +   ++     +     A+    
Sbjct: 253 EDVLPPVFEKYGVYKTAKKPPFMRIPYLEALDTYGTDKPDLRISLKLQDATEVLAD-CGF 311

Query: 150 KIFSFQNVNCNPFSEPE--YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ----- 202
           + F  Q V      +       + +       +            +  +    A+     
Sbjct: 312 EPFKGQTVKAVVAHDFTATRKAIDKVCEEVEMLSGAKAYWFKVGENNEISGGIAKFVKDN 371

Query: 203 ------QAGIRVAH---------------DDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                 + G++                        +      + +E          +  +
Sbjct: 372 AETVIEKLGLKAGDFVGVTAGTLRAAQKTGGALIKVLGATFEQYMEKEQY--QFCWIVDF 429

Query: 242 PA-PESALANIYPADPR------------------------FTKRFELYACNIELCNACD 276
           P       +                                   +++L    +EL +   
Sbjct: 430 PMYEIGEESGKLEFCHNPFSMPQGGMQGLKDAVANHTELDVLAYQYDLVCNGVELSSGAV 489

Query: 277 ELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
              DP      F      E +++ K                      P  +GIA G DR+
Sbjct: 490 RNHDPELMVEAFSVVGLGEDDVKAKF----PAMY------NAFTYGAPPHAGIAPGVDRM 539

Query: 330 VMLVTGANNINEVIWTPFSQSNQE 353
           +ML+ G  +I E+I  P +++  +
Sbjct: 540 IMLIAGEESIREIIPFPMNKNAMD 563


>gi|229071911|ref|ZP_04205122.1| Aspartyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228711207|gb|EEL63171.1| Aspartyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 591

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 45/151 (29%), Gaps = 13/151 (8%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRF 258
           + G  +   D     F  +    +              +P       ++       +   
Sbjct: 413 RLGKELELIDESKYNFLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKAR 472

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-E 315
            + ++L     EL      + +   Q   F      K   +   E        L      
Sbjct: 473 AQAYDLVLNGYELGGGSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYG 526

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 527 TPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 557


>gi|30264472|ref|NP_846849.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529930|ref|YP_021279.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187293|ref|YP_030545.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321769|ref|ZP_00394728.1| COG0173: Aspartyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165871956|ref|ZP_02216597.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|170709264|ref|ZP_02899684.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|228935723|ref|ZP_04098536.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229600038|ref|YP_002868689.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254724671|ref|ZP_05186454.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736505|ref|ZP_05194211.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751358|ref|ZP_05203395.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757690|ref|ZP_05209717.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|46577220|sp|Q81LI7|SYD_BACAN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781713|sp|C3P990|SYD_BACAA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|30259130|gb|AAP28335.1| aspartate--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505078|gb|AAT33754.1| aspartyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181220|gb|AAT56596.1| aspartyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712246|gb|EDR17782.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|170125840|gb|EDS94747.1| aspartyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|228823961|gb|EEM69780.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229264446|gb|ACQ46083.1| aspartate--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 591

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|319892683|ref|YP_004149558.1| Aspartyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162379|gb|ADV05922.1| Aspartyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 588

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 65/196 (33%), Gaps = 18/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +       R+ I  S+R++   + F ++++  L   +P     ++            
Sbjct: 136 RREKLAQTFKMRHQITRSIRQFLDGDGFYDVETPVLTKSTPEGARDYLVPSRVHDGEFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQIDIEMSFVEQED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +++                          +T  EA +RY   D   T    + 
Sbjct: 250 VMQLGEAMVKNVLADVKG---------IEMTDAFPRMTYTEAMSRY-GTDKPDTRFGMEL 299

Query: 192 PDRHLLYLQAQQAGIR 207
            D   L         +
Sbjct: 300 LDVSELGQIMDFKVFK 315



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 49/162 (30%), Gaps = 9/162 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRNKLGKERGLIDPEQYNFLWVTDWPLLEYDEEARRYVAGHHPFTSPKVEDIDLLETAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
           +    + ++L     EL      + D   Q+  F      K                L  
Sbjct: 470 EQAQAQAYDLVLNGFELGGGSIRIHDGELQQRMF------KALGFSDEAAQEQFGFLLDA 523

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                P   GIA+G DR VM+++G  N+ + I  P + S  +
Sbjct: 524 FKYGAPPHGGIALGLDRFVMILSGRTNLRDTIAFPKTASATD 565


>gi|323464279|gb|ADX76432.1| aspartyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 588

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 65/196 (33%), Gaps = 18/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +       R+ I  S+R++   + F ++++  L   +P     ++            
Sbjct: 136 RREKLAQTFKMRHQITRSIRQFLDGDGFYDVETPVLTKSTPEGARDYLVPSRVHDGEFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQIDIEMSFVEQED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +++                          +T  EA +RY   D   T    + 
Sbjct: 250 VMQLGEAMVKNVLADVKG---------IEMTDAFPRMTYTEAMSRY-GTDKPDTRFGMEL 299

Query: 192 PDRHLLYLQAQQAGIR 207
            D   L         +
Sbjct: 300 LDVSELGQIMDFKVFK 315



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 49/162 (30%), Gaps = 9/162 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+       +  +    L+E  E              P  E         
Sbjct: 410 ALRNKLGKERGLIDPEQYNFLWVTDWPLLEYDEEARRYVAAHHPFTSPKVEDIDLLETAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
           +    + ++L     EL      + D   Q+  F      K                L  
Sbjct: 470 EQAQAQAYDLVLNGFELGGGSIRIHDGELQQRMF------KALGFSDEAAQEQFGFLLDA 523

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                P   GIA+G DR VM+++G  N+ + I  P + S  +
Sbjct: 524 FKYGAPPHGGIALGLDRFVMILSGRTNLRDTIAFPKTASATD 565


>gi|237800215|ref|ZP_04588676.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023072|gb|EGI03129.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 591

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  EN F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDENGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F +  ++T  EA  RY   
Sbjct: 236 DIETSFLNEEDIIGLTEKMVRQLFKEVLDL----------EFGDFPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D        +        +D    +
Sbjct: 285 DKPDLRNPLELVDVADQLTGVEFKVFSGPANDPKGRV 321



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 51/162 (31%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N              P          
Sbjct: 407 EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFTALHHPFTAPKCTPEELEAN 466

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 467 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 521

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 522 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 563


>gi|229163351|ref|ZP_04291303.1| Aspartyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228620132|gb|EEK77006.1| Aspartyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 591

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|168204884|ref|ZP_02630889.1| aspartyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|168208633|ref|ZP_02634258.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|170663642|gb|EDT16325.1| aspartyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170713220|gb|EDT25402.1| aspartyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 597

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 21/200 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+    ++R+Y  +N F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 PGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQPEFTQVDLEMSFVEQDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I+   +                 +  + +T  +A  +Y   D        + 
Sbjct: 253 VMALNEGLIKHVFKEVLGVDVK---------TPIKRMTFKDAMEKY-GSDKPDLRFGMEI 302

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    ++ G +V  D
Sbjct: 303 TN---LSDVVKECGFKVFTD 319



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 45/142 (31%), Gaps = 5/142 (3%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           ++   +  ++ I    L+E  E              P  E              K ++L 
Sbjct: 424 VKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIQYLDTDPGRVRAKAYDLV 483

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
               EL      + D   Q   FE     ++      +      L       P   G+A 
Sbjct: 484 LNGEELGGGSIRIHDTKLQEKMFEVLGFTQES----AWERFGFLLEAFKFGPPPHGGLAF 539

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           G DR++M + G  NI +VI  P
Sbjct: 540 GLDRMIMFLAGTENIKDVITFP 561


>gi|291530817|emb|CBK96402.1| aspartyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 588

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 71/182 (39%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R+ I  + REYF +N F+EI++  + + +P     ++            
Sbjct: 133 RRKKLQDNLIMRHRIAKTAREYFYDNGFLEIETPMMMKSTPEGARDYLVPSRVHEGKFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    ++
Sbjct: 193 LPQ------SPQIYKQLLMISGFDRYIQLARCFRDEDLRADRQPEFTQIDLEMSFMDVDE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++     I+   +       +              +T  +A +RY   D   T    + 
Sbjct: 247 ILELTEGFIKKLMKDVLDVDIT---------IPLPRLTYNDAMSRY-GSDKPDTRFGMEI 296

Query: 192 PD 193
            D
Sbjct: 297 QD 298



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +Q GI       +  I      E  + +            P  E         
Sbjct: 407 ALRLKVGKQIGIVPDSGYNFLWITEFPFFEWDDESESWLAMHHPFTMPMEECLEYLDTDK 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K ++L    IELC+    + DP  Q   F    +       E        +    
Sbjct: 467 GKVRAKAYDLVLNGIELCSGSIRITDPELQERMF----RLLGLTDKEIEEKFGFLVDAYK 522

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              P   G+ +G DRL ML+ GA+++ +V+  P  +
Sbjct: 523 YAAPPHGGLGIGLDRLSMLLCGADSLRDVVAFPKVK 558


>gi|228917036|ref|ZP_04080596.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929447|ref|ZP_04092468.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229093473|ref|ZP_04224576.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228689944|gb|EEL43748.1| Aspartyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228830235|gb|EEM75851.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842643|gb|EEM87731.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 591

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|218234084|ref|YP_002369212.1| aspartyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228910238|ref|ZP_04074056.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228954687|ref|ZP_04116710.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229152606|ref|ZP_04280795.1| Aspartyl-tRNA synthetase [Bacillus cereus m1550]
 gi|301055911|ref|YP_003794122.1| aspartyl-tRNA synthetase [Bacillus anthracis CI]
 gi|226735101|sp|B7HE37|SYD_BACC4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218162041|gb|ACK62033.1| aspartate--tRNA ligase [Bacillus cereus B4264]
 gi|228630867|gb|EEK87507.1| Aspartyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228805014|gb|EEM51610.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228849402|gb|EEM94238.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|300378080|gb|ADK06984.1| aspartyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 591

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|52141106|ref|YP_085724.1| aspartyl-tRNA synthetase [Bacillus cereus E33L]
 gi|62287538|sp|Q634E3|SYD_BACCZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|51974575|gb|AAU16125.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus cereus
           E33L]
          Length = 591

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 43/138 (31%), Gaps = 17/138 (12%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDR 328
               + +   Q   F+     +   +++            L       P   GIA+G DR
Sbjct: 488 GSLRIYERDVQEKMFKALGFSQEDAQEQFG--------FLLEAFEYGTPPHGGIALGLDR 539

Query: 329 LVMLVTGANNINEVIWTP 346
           LVML+ G  N+ + I  P
Sbjct: 540 LVMLLAGRTNLRDTIAFP 557


>gi|49481703|ref|YP_038453.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|118479560|ref|YP_896711.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196034397|ref|ZP_03101806.1| aspartyl-tRNA synthetase [Bacillus cereus W]
 gi|196044917|ref|ZP_03112151.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218905597|ref|YP_002453431.1| aspartyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225866384|ref|YP_002751762.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|228948116|ref|ZP_04110400.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123943|ref|ZP_04253135.1| Aspartyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229186642|ref|ZP_04313803.1| Aspartyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|62287558|sp|Q6HDC3|SYD_BACHK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225319|sp|A0RJ11|SYD_BACAH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226735099|sp|B7JPY8|SYD_BACC0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781715|sp|C1ESU7|SYD_BACC3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49333259|gb|AAT63905.1| aspartate--tRNA ligase (aspartyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|118418785|gb|ABK87204.1| aspartyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|195992939|gb|EDX56898.1| aspartyl-tRNA synthetase [Bacillus cereus W]
 gi|196024405|gb|EDX63078.1| aspartyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218535605|gb|ACK88003.1| aspartyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225786714|gb|ACO26931.1| aspartate--tRNA ligase [Bacillus cereus 03BB102]
 gi|228596901|gb|EEK54560.1| Aspartyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228659245|gb|EEL14893.1| Aspartyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228811474|gb|EEM57811.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 591

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|324328305|gb|ADY23565.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 591

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|308184401|ref|YP_003928534.1| aspartyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060321|gb|ADO02217.1| aspartyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 577

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 395 DKEIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIE 454

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 455 CKDLEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQKKFGFLL 510

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 511 EALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 67/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLSAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S   +M    ++++   +              N     + +   EA   Y 
Sbjct: 231 QIDAEMSFCSENDVMGVVEDLLQEIFKAIGH----------NISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNAIFSNIAQDPKNKRI 319


>gi|182624429|ref|ZP_02952213.1| aspartyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177910432|gb|EDT72809.1| aspartyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 597

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 21/200 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+    ++R+Y  +N F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQNIFKIRHKTTKAIRDYLDQNGFLEMETPILTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 PGMFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRANRQPEFTQVDLEMSFVEQDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I+   +                 +  + +T  +A  +Y   D        + 
Sbjct: 253 VMALNEGLIKHVFKEVLGVDVK---------TPIKRMTFKDAMEKY-GSDKPDLRFGMEI 302

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    ++ G +V  D
Sbjct: 303 TN---LSDVVKECGFKVFTD 319



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 45/142 (31%), Gaps = 5/142 (3%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           ++   +  ++ I    L+E  E              P  E              K ++L 
Sbjct: 424 VKDKSEFNFTWITEFDLLEYDEEEGRYFAAHHPFTMPMDEDIKYLDTDPGRVRAKAYDLV 483

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
               EL      + D   Q   FE     ++      +      L       P   G+A 
Sbjct: 484 LNGEELGGGSIRIHDTKLQEKMFEVLGFTQES----AWERFGFLLEAFKFGPPPHGGLAF 539

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           G DR++M + G  NI +VI  P
Sbjct: 540 GLDRMIMFLAGTENIKDVITFP 561


>gi|254417175|ref|ZP_05030920.1| aspartyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196175981|gb|EDX71000.1| aspartyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 602

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 22/201 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R R  +  R+ +  ++R Y   E  FIE+++  L   +P     ++           
Sbjct: 136 RRDRMRQNIELRHEVIKAIRRYLEDEQHFIEVETPMLTRSTPEGARDYLVPSRVNPGQWY 195

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   +  S +
Sbjct: 196 ALPQ------SPQLFKQLLMVAGLDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSQD 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++++    ++    +                       T AE   RY   D   T    +
Sbjct: 250 EILQLNEGLVCHIFKTVKGIDIP---------RPFPRFTYAEVMERY-GTDKPDTRFGLE 299

Query: 191 QPDRHLLYLQAQQAGIRVAHD 211
             D   +    + +G +V   
Sbjct: 300 LVD---VSELLKDSGFKVFSG 317



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 39/130 (30%), Gaps = 5/130 (3%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              +    +              +P       +I        + ++L     E+      
Sbjct: 438 LLWVTDYPMFEWNADEKRLEAIHHPFTAPHPDDIDDLKTARAQAYDLVYNGYEVGGGSLR 497

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGA 336
           +  P  QR  FE           E        L       P   GIA G DRLVML+ G 
Sbjct: 498 MYQPDIQRRVFEAIGLS----PEEAQNKFGFLLEAFDYGAPPHGGIAYGLDRLVMLLAGE 553

Query: 337 NNINEVIWTP 346
            +I +VI  P
Sbjct: 554 ESIRDVIAFP 563


>gi|47566591|ref|ZP_00237413.1| aspartyl-tRNA synthetase [Bacillus cereus G9241]
 gi|218899571|ref|YP_002447982.1| aspartyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228902930|ref|ZP_04067071.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228967478|ref|ZP_04128506.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|229158018|ref|ZP_04286089.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|226735100|sp|B7IIR4|SYD_BACC2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|47556621|gb|EAL14953.1| aspartyl-tRNA synthetase [Bacillus cereus G9241]
 gi|218544670|gb|ACK97064.1| aspartyl-tRNA synthetase [Bacillus cereus G9842]
 gi|228625471|gb|EEK82227.1| Aspartyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228792193|gb|EEM39767.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856714|gb|EEN01233.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 591

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|332161514|ref|YP_004298091.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665744|gb|ADZ42388.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 598

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGVDLGDFPVMTFAEAMRRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDAKGRV 318



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G++        P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLSAMHHPFTAPKGMSPEQLAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQQVF 500

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E+E +EK              L  L    P  +G+A G DRLVML+TG +NI +
Sbjct: 501 GILGINEEEQREKFG----------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRD 550

Query: 342 VIWTP 346
           VI  P
Sbjct: 551 VIAFP 555


>gi|114566350|ref|YP_753504.1| aspartyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318569|sp|Q0AYS1|SYD_SYNWW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114337285|gb|ABI68133.1| aspartyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 586

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 66/195 (33%), Gaps = 9/195 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                R  LL R+ +   +R++     FIEI++  L   +P     ++            
Sbjct: 134 RRPEMRDNLLLRHRVVKCMRDFLDSRGFIEIETPILTKSTPEGARDYLVPSRVHPGEFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 194 LPQ------SPQIFKQILMVAGMEKYFQIARCFRDEDLRADRQPEFTQLDMEMSFVDEED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++      A  K+                    +   R+  +++    +    
Sbjct: 248 IIVLVEEMMAEIFFKAAGKVIRTPFPRLAYDDAMINYGSDKPDLRF-GLEIVELSEMLQN 306

Query: 192 PDRHLLYLQAQQAGI 206
               +     Q  G+
Sbjct: 307 TQFKVFASALQSGGV 321



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 54/161 (33%), Gaps = 15/161 (9%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L     ++ G+    +  +  +    L+E  E              P  E          
Sbjct: 408 LRLELGRKKGLIAEEELNFVWVTDFPLLEYDEEEKRYQAKHHPFTSPRLEDIEIMDSEPG 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDF 309
               + ++L     EL      +     Q   F      ++E ++K     E +      
Sbjct: 468 RVKARAYDLVLNGTELGGGSIRIHRREWQEKMFSVLGMSQEEARDKFGFMLEAFE----- 522

Query: 310 LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                  P   GIA G DRL+ML+ G N++ +V+  P +QS
Sbjct: 523 ----YGTPPHGGIAFGVDRLLMLLAGRNSVRDVMAFPKTQS 559


>gi|320323055|gb|EFW79144.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329673|gb|EFW85662.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330877982|gb|EGH12131.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 591

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  +N F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F +  ++T  EA  RY   
Sbjct: 236 DIETSFLNEEDIIGLTEKMVRQLFKEVLDL----------EFGDFPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D        +        +D    +
Sbjct: 285 DKPDLRNPLELVDVADQLTGVEFKVFSGPANDPKGRV 321



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 51/162 (31%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N              P          
Sbjct: 407 EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFTALHHPFTAPKCTPEELEAN 466

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 467 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 521

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 522 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 563


>gi|228923154|ref|ZP_04086445.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228836533|gb|EEM81883.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 593

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|66044654|ref|YP_234495.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|257487013|ref|ZP_05641054.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289626493|ref|ZP_06459447.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|298488212|ref|ZP_07006248.1| Aspartyl-tRNA synthetase; Aspartyl-tRNA(Asn) synthetase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|302187160|ref|ZP_07263833.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
 gi|81308434|sp|Q4ZWL5|SYD_PSEU2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|63255361|gb|AAY36457.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Pseudomonas
           syringae pv. syringae B728a]
 gi|298157270|gb|EFH98354.1| Aspartyl-tRNA synthetase; Aspartyl-tRNA(Asn) synthetase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330868609|gb|EGH03318.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330950612|gb|EGH50872.1| aspartyl-tRNA synthetase [Pseudomonas syringae Cit 7]
 gi|330968894|gb|EGH68960.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
 gi|330988966|gb|EGH87069.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009344|gb|EGH89400.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 591

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  +N F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F +  ++T  EA  RY   
Sbjct: 236 DIETSFLNEEDIIGLTEKMVRQLFKEVLDL----------EFGDFPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D        +        +D    +
Sbjct: 285 DKPDLRNPLELVDVADQLTGVEFKVFSGPANDPKGRV 321



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 51/162 (31%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N              P          
Sbjct: 407 EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFTALHHPFTAPKCTPEELEAN 466

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 467 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 521

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 522 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 563


>gi|238783295|ref|ZP_04627320.1| Aspartyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238715888|gb|EEQ07875.1| Aspartyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 595

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 73/206 (35%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGVDLGDFPVMTFAEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + +        +DT   +
Sbjct: 293 VDVADLVKEVEFKVFSGPANDTKGRV 318



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLTAMHHPFTAPKEMSPQQLAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQQVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 GILGINEHEQREKFG--------FLLDALKYGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|322832431|ref|YP_004212458.1| aspartyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321167632|gb|ADW73331.1| aspartyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 598

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 74/227 (32%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +   + F++I++  L   
Sbjct: 109 PLDSNHVNTEEARLKYRYLDLRRPEMANRLKARAKITSFVRRFMDSHDFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  S EQ+ +    + R   +                  +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMSAEQVREVMEKLARELWQEVKGVDLG----------DFPIMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    +        +D    +
Sbjct: 273 AEAMRRY-GSDKPDLRNPMEMVDVADLMKNIEFKVFADPANDPKGRV 318



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 56/148 (37%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIF-SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            +++  +D W+ ++     + +     G++        P   SA              ++
Sbjct: 416 DLKITKEDMWAPLWVIDFPMFEDTDEGGLSAMHHPFTAPKDMSAEELAANPVSAIANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           +     E+      +     Q+  F      E ++++K            L  L    P 
Sbjct: 476 MVINGYEVGGGSVRIHRSEMQQTVFSILGINEHEQREKFG--------FLLDALKYGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRLVML+TG +NI +VI  P
Sbjct: 528 HAGLAFGLDRLVMLLTGTDNIRDVIAFP 555


>gi|241889468|ref|ZP_04776768.1| aspartyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863864|gb|EER68246.1| aspartyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 590

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 23/197 (11%)

Query: 4   IPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET 57
           + S+    +  +   R       L  R+ I  + R+Y   N F+++++  L   +P    
Sbjct: 122 LSSEELRLKYRYLDLRRTELAEVLHLRSKITKATRDYLDNNMFVDVETPILTKSTPEGAR 181

Query: 58  -HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            ++            + +      SP+   + L+ AG ++ +  A  +R+ +     QP+
Sbjct: 182 DYLVPSRVHPGEFYALPQ------SPQLFKQLLMIAGFDRYYQVARCFRDEDLRADRQPD 235

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT ++   +  S E+++     +I    +              +       +   EA  R
Sbjct: 236 FTQIDMEMSFMSQEEILTMIEGLIAHVMKEVKG---------IDVVLPFPRLDYEEAMER 286

Query: 177 YANIDLGTTLDNPDQPD 193
           +   D   T    +  D
Sbjct: 287 F-GSDKPDTRFGMELKD 302



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A    +       +  + +  L+E  E     +        P  E         
Sbjct: 411 ALRQKLAADLDLIDKDKYNYLWVVNWPLLEYDEEKGRYSAAHHPFTMPKVEDVELLEAAP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +  + + +++     EL      + D   Q   F+     + Q +++            L
Sbjct: 471 EKAYAQAYDIVLNGYELGGGSIRIYDKEVQSSMFKALGFTQEQAQEQFG--------FLL 522

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 +P   G A+G DR VML+ G +N+ + I  P
Sbjct: 523 DAFEYGVPPHGGCALGLDRFVMLLAGRDNLRDTIAFP 559


>gi|170726921|ref|YP_001760947.1| aspartyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|238688666|sp|B1KHG7|SYD_SHEWM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169812268|gb|ACA86852.1| aspartyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 595

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 86/249 (34%), Gaps = 21/249 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R+ + S++R +  ++ F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMADRIVFRSKVTSAVRRFLDDSGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S EQ
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R                      E   +T AEA  R+   D     +  + 
Sbjct: 246 VMAKTEEMVRGLFNDLL----------NVDLGEFPKMTFAEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSD--IFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
            D   +  + + A      +D      + S     K+           +  Y A   A  
Sbjct: 295 IDIADIVKEVEFAVFNGPANDPEGRVAVLSIPGGAKLSRKQLDEYAKYVTIYGAKGLAWM 354

Query: 250 NIYPADPRF 258
            +   D   
Sbjct: 355 KVNDLDQGM 363



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 48/147 (32%), Gaps = 7/147 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT--K 260
           +AG               +     E         +   + AP         ADP      
Sbjct: 414 KAGEDFDLLQGEWKPLWVVDFPMFERTSDGGLHAMHHPFTAPTGISPEQLEADPTAAISD 473

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            +++     EL      + +   Q   F     E      E        L  L    P  
Sbjct: 474 AYDMVLNGCELGGGSVRIHNSEMQSAVFRILGIE----EEEANEKFGFLLEALRYGTPPH 529

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
           +G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 AGLAFGLDRIIMLMTGASSIRDVMAFP 556


>gi|209528217|ref|ZP_03276684.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209491339|gb|EDZ91727.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 518

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 76/198 (38%), Gaps = 22/198 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQ-FIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +  ++R +  + + FIE+++  L   +P     ++           
Sbjct: 136 RRERMTRNLQLRHEVIKAMRRFLEDQEHFIEVETPILTRSTPEGARDYLVPSRVNP---- 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
              +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E
Sbjct: 192 --GEWFALPQSPQLFKQMLMVSGFDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSQE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++    N++    +            N +       +T +EA  RY   D   T    +
Sbjct: 250 EVLALNENLVCHIFKTV---------KNIDLPRPFPRMTYSEAMERY-GSDKPDTRFGLE 299

Query: 191 QPDRHLLYLQAQQAGIRV 208
             D   +    + +G +V
Sbjct: 300 LAD---VSDLLKDSGFKV 314


>gi|289650939|ref|ZP_06482282.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 591

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  +N F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F +  ++T  EA  RY   
Sbjct: 236 DIETSFLNEEDIIGLTEKMVRQLFKEVLDL----------EFGDFPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D        +        +D    +
Sbjct: 285 DKPDLRNPLELVDVADQLTGVEFKVFSGPANDPKGRV 321



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 51/162 (31%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N              P          
Sbjct: 407 EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFTALHHPFTAPKCTPEELEAN 466

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 467 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 521

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 522 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 563


>gi|329768511|ref|ZP_08259999.1| aspartyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836661|gb|EGF86318.1| aspartyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 590

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 23/197 (11%)

Query: 4   IPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET 57
           + S+    +  +   R       L  R+ I  + R+Y   N F+++++  L   +P    
Sbjct: 122 LSSEELRLKYRYLDLRRTELAEVLHLRSKITKATRDYLDNNMFVDVETPILTKSTPEGAR 181

Query: 58  -HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            ++            + +      SP+   + L+ AG ++ +  A  +R+ +     QP+
Sbjct: 182 DYLVPSRVHPGEFYALPQ------SPQLFKQLLMVAGFDRYYQVARCFRDEDLRADRQPD 235

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT ++   +  S E+++     +I    +              +       +   EA  R
Sbjct: 236 FTQIDMEMSFMSQEEILTMIEGLIAHVMKEVKG---------IDVVLPFPRLDYEEAMER 286

Query: 177 YANIDLGTTLDNPDQPD 193
           +   D   T    +  D
Sbjct: 287 F-GSDKPDTRFGMELKD 302



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 52/157 (33%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A    +   +   +  + +  L+E  E     +        P  E         
Sbjct: 411 ALRQKLAADLDLIDKNKYNYLWVVNWPLLEYDEEKGRYSAAHHPFTMPKVEDVELLETAP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +  + + +++     EL      + D   Q   F+     + Q +++            L
Sbjct: 471 EKAYAQAYDIVLNGYELGGGSIRIYDKEVQSSMFKALGFTQEQAQEQFG--------FLL 522

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 +P   G A+G DR VML+ G +N+ + I  P
Sbjct: 523 DAFEYGVPPHGGCALGLDRFVMLLAGRDNLRDTIAFP 559


>gi|238796293|ref|ZP_04639802.1| Aspartyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238719738|gb|EEQ11545.1| Aspartyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 598

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 72/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGVDLGDFPVMTFAEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + +        +D    +
Sbjct: 293 VDVADLVKEVEFKVFSGPANDAKGRV 318



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLTAMHHPFTAPKEMSPAELAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQQVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 GILGINEHEQREKFG--------FLLDALKYGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|284050133|ref|ZP_06380343.1| aspartyl-tRNA synthetase [Arthrospira platensis str. Paraca]
 gi|291569798|dbj|BAI92070.1| aspartyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 597

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 74/198 (37%), Gaps = 22/198 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQ-FIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +  ++R +  + + FIE+++  L   +P     ++           
Sbjct: 136 RRERMTRNLQLRHEVIKAMRRFLEDQEHFIEVETPILTRSTPEGARDYLVPSRVNP---- 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
              +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E
Sbjct: 192 --GEWFALPQSPQLFKQMLMVSGFDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSQE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++    N++    +              +       +T  +A  RY   D   T    +
Sbjct: 250 EILTLNENLVCHIFKTVKG---------IDLPRPFPRMTYKDAMERY-GSDKPDTRFGLE 299

Query: 191 QPDRHLLYLQAQQAGIRV 208
             D   +    + +G +V
Sbjct: 300 LAD---VSDLLKDSGFKV 314



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 39/130 (30%), Gaps = 5/130 (3%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              +    +              +P       +I        + ++L     E+      
Sbjct: 436 LLWVTDFPMFEWNQDEKRLEAIHHPFTSPHPDDINDLKTARAQAYDLVLNGTEIGGGSLR 495

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           +     Q   F+           E Y      L       P   GIA G DRLVML+ G 
Sbjct: 496 IYQREIQEKVFDAIGLS----TEEAYNKFGFLLEAFEYGTPPHGGIAYGLDRLVMLLAGE 551

Query: 337 NNINEVIWTP 346
           ++I +VI  P
Sbjct: 552 DSIRDVIAFP 561


>gi|228941571|ref|ZP_04104119.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974500|ref|ZP_04135067.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981094|ref|ZP_04141395.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778635|gb|EEM26901.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785217|gb|EEM33229.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818078|gb|EEM64155.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942184|gb|AEA18080.1| aspartyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 591

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 70/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILEMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|114563355|ref|YP_750868.1| aspartyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299595|sp|Q081N5|SYD_SHEFN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114334648|gb|ABI72030.1| aspartyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 591

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 76/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R  + SS+R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAERLIFRAKVTSSVRRFLDGNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S EQ
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSAEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    ++R   +                  +   +T AEA  RY   D     +  + 
Sbjct: 246 VMEKTEQMMRGLFQDLL----------NVDLGDFPRMTYAEAMKRY-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    + A      +D    +
Sbjct: 295 VDIADLVKDVEFAVFNGPANDVEGRV 320



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 7/152 (4%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    +  +     +    + EKI  N G +        P   S         
Sbjct: 410 ALRLKAGEDFKLLEGEWRPMWVVDFPMFEKI--NGGFHAVHHPFTAPRGISPAELAADPA 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              +  +++     EL      + +   Q   F     E +    E        L  L  
Sbjct: 468 AAISDAYDMVLNGCELGGGSVRIHNAEMQSTVFSILGIEAE----EAQEKFGFLLEALRY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A G DR++ML+TGA++I +V+  P
Sbjct: 524 GTPPHAGLAFGLDRIIMLMTGASSIRDVMAFP 555


>gi|88800176|ref|ZP_01115744.1| aspartyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88777022|gb|EAR08229.1| aspartyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 590

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 18/192 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ I SS+R    +  FI+I++  L   +P     ++    T       
Sbjct: 132 RRPEMQQKLILRSKITSSIRRSLEDQGFIDIETPILNRATPEGARDYLVPSRTHPGSF-- 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 190 ----FSLPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQIDLETSFMDEEG 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +IR   +                F + E +  +EA  R+ +      +     
Sbjct: 246 IMAITETMIRDIFKEVL----------NVEFDDFERMPFSEAMERFGSDKPDLRIPLELV 295

Query: 192 PDRHLLYLQAQQ 203
               L+     +
Sbjct: 296 TVGDLMTEVEFK 307



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
           +K +++    +EL      +     Q   F+    +K+    E        L+ L    P
Sbjct: 471 SKAYDMVLNGMELGGGSIRIHQEEMQNAVFDVLKIDKE----EQEEKFGFLLSALRYGAP 526

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              G+A G DRLVML+TG+++I EVI  P +Q+
Sbjct: 527 PHGGLAFGLDRLVMLMTGSDSIREVIAFPKTQT 559


>gi|75764435|ref|ZP_00743935.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488076|gb|EAO51792.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 580

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|123442639|ref|YP_001006616.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166225443|sp|A1JRL1|SYD_YERE8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|122089600|emb|CAL12449.1| aspartyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 598

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGVDLGDFPVMTFAEAMRRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDAKGRV 318



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G++        P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLSAMHHPFTAPKDMSPEQLAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQQVF 500

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E+E +EK              L  L    P  +G+A G DRLVML+TG +NI +
Sbjct: 501 GILGINEEEQREKFG----------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRD 550

Query: 342 VIWTP 346
           VI  P
Sbjct: 551 VIAFP 555


>gi|114047575|ref|YP_738125.1| aspartyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123326530|sp|Q0HUY7|SYD_SHESR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|113889017|gb|ABI43068.1| aspartyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 591

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 77/208 (37%), Gaps = 20/208 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R  + S++R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M     ++R               +      E   +T  EA  R+ +   DL   L+  
Sbjct: 246 VMAKTEEMMRGLFLE----------MLNVDLGEFPRMTYNEAMRRFGSDKPDLRNPLELV 295

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D  D       A  +G     +   + +
Sbjct: 296 DVADLLKNVEFAVFSGPANDEEGRVAAL 323



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 48/146 (32%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKR 261
           +AG      +        +     E   G  +        P   +          R +  
Sbjct: 414 KAGEDFNLLEGQWRPLWVVDFPMFEKINGSFHAVHHPFTAPRGVTPQELEANPANRVSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      + +   Q   F    +       E        L  L    P  +
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVF----RILGITDEEAKEKFGFLLEALRYGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 GLAFGLDRIIMLMTGASSIRDVMAFP 555


>gi|238756964|ref|ZP_04618152.1| Aspartyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238704794|gb|EEP97323.1| Aspartyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 598

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGVDLGDFPVMTFAEAMRRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDAKGRV 318



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G++        P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLSAMHHPFTAPKDMSPEQLAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQQVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 GILGINEHEQREKFG--------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|330861469|emb|CBX71688.1| aspartyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 611

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGVDLGDFPVMTFAEAMRRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDAKGRV 318



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G++        P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLSAMHHPFTAPKGMSPEQLAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQQVF 500

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E+E +EK              L  L    P  +G+A G DRLVML+TG +NI +
Sbjct: 501 GILGINEEEQREKFG----------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRD 550

Query: 342 VIWTP 346
           VI  P
Sbjct: 551 VIAFP 555


>gi|291557677|emb|CBL34794.1| aspartyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 588

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 72/182 (39%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R+ I  + REYF +N F+EI++  + + +P     ++            
Sbjct: 133 RRKKLQDNLIMRHRIAKTAREYFYDNGFLEIETPMMMKSTPEGARDYLVPSRVHEGKFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    ++
Sbjct: 193 LPQ------SPQIYKQLLMISGFDRYIQLARCFRDEDLRADRQPEFTQIDLEMSFMDVDE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++     I+   +       +         +    +T  +A +RY   D   T    + 
Sbjct: 247 ILELTEGFIKKLMKDVLDVDIT---------TPLPRLTYNDAMSRY-GSDKPDTRFGMEI 296

Query: 192 PD 193
            D
Sbjct: 297 QD 298



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +Q GI       +  I      E  + +            P  E         
Sbjct: 407 ALRLKVGKQIGIVPDSGYNFLWITEFPFFEWDDESESWLAMHHPFTMPMEECLEYLDTDK 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K ++L    IELC+    + DP  Q   F    +       E        +    
Sbjct: 467 GKVRAKAYDLVLNGIELCSGSIRITDPELQERMF----RLLGLTDKEIEEKFGFLVDAYK 522

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              P   G+ +G DRL ML+ GA+++ +V+  P  +
Sbjct: 523 YAAPPHGGLGIGLDRLSMLLCGADSLRDVVAFPKVK 558


>gi|317014037|gb|ADU81473.1| aspartyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 579

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 95/348 (27%), Gaps = 26/348 (7%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  EN  + +    LQ        T  + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDENDVMGVVEDLLQAIFKAIGHTISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSP----EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
            +        Y    P    E    ++     +             +          L  
Sbjct: 269 RMPYKEAMENYGSDKPDLRFELPLIEVGDCFMDSSNSIFSNIAKDPKDKR----IKALNV 324

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANID 181
             A   + + +   +                 +      P  +       +      +  
Sbjct: 325 KGADALFSRSVLKELEEFVRQFGAQGLAYLQIKEDGIKGPLVKFLSEKGLKNILERTDAQ 384

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +G  +      D+ ++     +  ++VA   D    D  + + +                
Sbjct: 385 VGDIV-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVHFPMFEKTENGYHAA 443

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P            +      +++    +EL      +     Q+  FEK         
Sbjct: 444 HHPFTMPKNIECEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----NE 499

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L  L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 500 EEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 65/219 (29%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQAIFKAIGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNSIFSNIAKDPKDKRI 319


>gi|229019624|ref|ZP_04176436.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229025864|ref|ZP_04182260.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735416|gb|EEL86015.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228741672|gb|EEL91860.1| Aspartyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 591

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 70/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILEMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 TDLSEFAAGC 308



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|58038707|ref|YP_190671.1| lysyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|58001121|gb|AAW60015.1| Lysyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 119

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 53/115 (46%), Positives = 75/115 (65%), Gaps = 1/115 (0%)

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
           G    T L  +PA ++ALA   P D R   RFELY   +EL NA +EL DP+EQR RF  
Sbjct: 3   GRERPTFLTHWPAEQAALARRDPEDGRAALRFELYVSGLELANAFEELTDPVEQRERFAT 62

Query: 291 EMQEKKKIY-NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           + + + ++  ++ + +DE FLA L ++P  SGIA+GFDRLVML TGA  I++++W
Sbjct: 63  DRKRRMELSPDQDWAVDEAFLAALPDLPPCSGIALGFDRLVMLATGAPRISDILW 117


>gi|162447681|ref|YP_001620813.1| aspartyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|161985788|gb|ABX81437.1| aspartyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 567

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 60/182 (32%), Gaps = 15/182 (8%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           Y    +  T +        L    A+  G      ++   I    L E  E +  +    
Sbjct: 373 YTLFIVPGTYEGATNACGALRKELAKDLGYIDETLESLVWIVDFPLFEYSEEDQRLYARH 432

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EM 292
                P                 K ++L     E+      + +   Q   FEK    + 
Sbjct: 433 HPFTAPKDL--EDFRNNPKDTLAKAYDLVWNGYEVGGGSMRIYNQEVQNEMFEKLGFTQE 490

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           + + K           F+  L    P   GIA G DR+VML T  +NI +VI  P +QS 
Sbjct: 491 EIRNKFG--------FFIDALKYGTPPHGGIAFGLDRIVMLATKTDNIRDVIAFPKTQSA 542

Query: 352 QE 353
           ++
Sbjct: 543 RD 544



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 65/176 (36%), Gaps = 16/176 (9%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            LL+R+ I  S+R   + N F+E+++  L   +P      + 
Sbjct: 120 EVRLKYRYLDLRKPTSKNYLLQRSKITQSIRNSLLNNNFLELETPYLVKTTPEGA---KE 176

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +  +  +   L  SP+   +  + +G EK F FA  +R+ +     Q EFT ++
Sbjct: 177 FIVPSRL--YHGEGYALAQSPQMFKQLYMVSGFEKYFQFARCFRDEDLRADRQLEFTQID 234

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
              +  + E +MK    ++    +    K               +     +   RY
Sbjct: 235 IEASFITQEDIMKLGEEMMSNMFKDILGKELKLPIARLTYQDAFDMYGSDKPDLRY 290


>gi|167629918|ref|YP_001680417.1| aspartyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|226736542|sp|B0TF89|SYD_HELMI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167592658|gb|ABZ84406.1| aspartyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 605

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 16/181 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+    ++R++   N F+EI++  L   +P      R F     I    
Sbjct: 142 RRPEMQRNLIIRHKTAKAMRDFLDRNGFLEIETPMLTKSTPEG---AREFMVPSRIH--P 196

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ F     +R+ +     QPEFT L+   +    + L
Sbjct: 197 GEFFVLPQSPQLYKQILMVAGMERYFQIVRCFRDEDLRADRQPEFTQLDIEMSFTQMDDL 256

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     ++    + A  K  S         +    I  AEA  R+   D        +  
Sbjct: 257 LTLMEEMVAHIFKEALGKEIS---------TPFRRIPYAEAMGRF-GSDKPDLRFGLELI 306

Query: 193 D 193
           D
Sbjct: 307 D 307



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 53/159 (33%), Gaps = 5/159 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +  +    ++ +    L+E        N        P  E          
Sbjct: 416 LRQELARRLNLIDSEKLEFAWVVDFPLVEYDPEEKRYNAIHHPFTAPKDEDLDLLDKEPG 475

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
               K ++L    +EL      +     Q   F       +    E Y      L     
Sbjct: 476 KVRAKAYDLVLNGVELGGGSLRIYRRDIQEKMFAILGLTAE----EAYQKFGFLLDAFDY 531

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   GIA G DR++ML+TG + I +VI  P +QS  +
Sbjct: 532 GTPPHGGIAFGLDRMIMLMTGRDTIRDVIAFPKTQSASD 570


>gi|317009370|gb|ADU79950.1| aspartyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 577

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 94/351 (26%), Gaps = 32/351 (9%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  EN  + +    LQ        T  + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDENDVMGVVEDLLQEIFKAIGHTISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-------EFTM 119
            +        Y    P+   +         +      +R+                    
Sbjct: 269 RMPYKEAMENYGSDKPDLRFEL-------PLIEVGDCFRDSSNAIFSNIAQDPKNKRIKA 321

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYA 178
           L    A   + + +   +                 +      P  +       +      
Sbjct: 322 LNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIKEDGIKGPLVKFLSEKGLKNILEKT 381

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCT 236
               G  +      D+ ++     +  ++VA   D    D  + + +             
Sbjct: 382 GAKTGDIV-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGY 440

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
               +P            +      +++    +EL      +     Q+  FEK      
Sbjct: 441 HAAHHPFTMPKNIECEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI--- 497

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G A+GFDRL+ML+T +N+I +VI  P
Sbjct: 498 -NEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSNSIRDVIAFP 547



 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 65/219 (29%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLSAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQEIFKAIGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFRDSSNAIFSNIAQDPKNKRI 319


>gi|325956620|ref|YP_004292032.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333185|gb|ADZ07093.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 605

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 66/196 (33%), Gaps = 8/196 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I  +  E+F EN FI+I++  L + SP     ++            
Sbjct: 136 RRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMEMSFADEET 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY  +    +    D 
Sbjct: 250 IQGYTEGLLKKIMKDVKGIDLKTPIKRITWTDAMNKYGSDKPDTRYGMLIHDLSSIFKDS 309

Query: 192 PDRHLLYLQAQQAGIR 207
             +      A    ++
Sbjct: 310 DFKVFSGAIADGGFVK 325



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ GI       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q + F+     KK+ Y E +      +  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAY-EQFGY---LMDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V+  P
Sbjct: 526 MGFPPHAGLAIGLDRFAMMLANKDNIRDVLAFP 558


>gi|127513007|ref|YP_001094204.1| aspartyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166225428|sp|A3QEP7|SYD_SHELP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126638302|gb|ABO23945.1| aspartyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 592

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 75/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R+ + S++R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAERIIFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSAQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R   +                  E   +T AEA  RY   D     +  + 
Sbjct: 246 VMDKTEEMVRGLFKELL----------NVDLGEFPKMTFAEAMRRY-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L         +   +D+   +
Sbjct: 295 VDVADLVKDVDFKVFQEPANDSEGRV 320



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 7/147 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNL--GINCCTILDRYPAPESALANIYPADPRFTK 260
           + G               +     E     G++        P+  +            + 
Sbjct: 414 KVGEDFDLLQGDWKPLWVVDFPMFERTSDGGLHAMHHPFTAPSGITPAELEADPTAAISD 473

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            +++     EL      + D   Q   F    +       E        L  L    P  
Sbjct: 474 AYDMVLNGCELGGGSVRIYDAEMQSAVF----RILGINDEEAQEKFGFLLEALKYGTPPH 529

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
           +G+A G DR+VML+TGA++I +V+  P
Sbjct: 530 AGLAFGLDRMVMLMTGASSIRDVMAFP 556


>gi|321257875|ref|XP_003193737.1| asparagine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317460207|gb|ADV21950.1| asparagine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 513

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 53/384 (13%), Positives = 105/384 (27%), Gaps = 55/384 (14%)

Query: 4   IPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNET 57
           +P+    + + H R R       +  R+ +     ++F  N F+ + +  L  S      
Sbjct: 134 LPASVLRD-NAHLRFRTSQTAAVMRIRDALARDWHDWFESNDFVHVHTPILTGSDCEGAG 192

Query: 58  HIRAFSTELIIQDHIRKPLY------LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
            +                 +      L  S +    +       + +  + A+R      
Sbjct: 193 EVFTIVDHPPPSSPTSPQPFFPHSVHLTVSGQLHL-EAPTHALSRTYTLSPAFRAEPSLT 251

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ------------KIFSFQNVN 158
             H  EF MLE   A +     +   +        V                  +    +
Sbjct: 252 SRHLSEFHMLEAEVAWQDDLDGLLSIVE--EGMKNVVGNILNGEKRGKRLRDDLTTVARS 309

Query: 159 CNPFSEPEYIT-----VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
            +   + E +T     VA+       +               LL      +   ++   +
Sbjct: 310 LHEADDLESVTGRGQEVADTLYHLRQVVDKPFTRITYTSALELLSSLHASSPSMISPPPS 369

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN---IYPADPRFTKR--------- 261
           W    S    + +  +   N    + RYP  +                T+          
Sbjct: 370 WGQGISTDHEKLLAAH--FNGPVFVTRYPKEQKPFYMLPTPSTMKNEKTEASRGPTVECF 427

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSG 321
             L+    E+           E  H  E+   +K++     + +D   L          G
Sbjct: 428 DLLFPHWGEIAGGSLREHRLAELTHVIEEMGMKKEEYG---WYLD---LRK-YGSVPHGG 480

Query: 322 IAMGFDRLVMLVTGANNINEVIWT 345
             MG+DR V   TG  N+ +V+  
Sbjct: 481 WGMGWDRWVGWATGMGNVRDVVPF 504


>gi|167750485|ref|ZP_02422612.1| hypothetical protein EUBSIR_01461 [Eubacterium siraeum DSM 15702]
 gi|167656636|gb|EDS00766.1| hypothetical protein EUBSIR_01461 [Eubacterium siraeum DSM 15702]
          Length = 592

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 72/182 (39%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R+ I  + REYF +N F+EI++  + + +P     ++            
Sbjct: 137 RRKKLQDNLIMRHRIAKTAREYFYDNGFLEIETPMMMKSTPEGARDYLVPSRVHEGKFYA 196

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    ++
Sbjct: 197 LPQ------SPQIYKQLLMISGFDRYIQLARCFRDEDLRADRQPEFTQIDLEMSFMDVDE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++     I+   +       +         +    +T  +A +RY   D   T    + 
Sbjct: 251 ILELTEGFIKKLMKDVLDVDIT---------TPLPRLTYNDAMSRY-GSDKPDTRFGMEI 300

Query: 192 PD 193
            D
Sbjct: 301 QD 302



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +Q GI       +  I      E  + +            P  E         
Sbjct: 411 ALRLKVGKQIGIVPDSGYNFLWITEFPFFEWDDESESWLAMHHPFTMPMEECLEYLDTDK 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K ++L    IELC+    + DP  Q   F    +       E        +    
Sbjct: 471 GKVRAKAYDLVLNGIELCSGSIRITDPELQERMF----RLLGLTDKEIEEKFGFLVDAYK 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              P   G+ +G DRL ML+ GA+++ +V+  P  +
Sbjct: 527 YAAPPHGGLGIGLDRLSMLLCGADSLRDVVAFPKVK 562


>gi|238693264|sp|B4RXE7|SYD_ALTMD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 586

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 71/213 (33%), Gaps = 27/213 (12%)

Query: 15  HYR----RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
            YR    RRP     L  R  +  ++R +  E  F++I++  L   +P     ++    T
Sbjct: 123 RYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEEEGFLDIETPILTKATPEGARDYLVPSRT 182

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   
Sbjct: 183 HKGEFFALPQ------SPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQPEFTQIDIET 236

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
                + +M     +IR                      +   +T AEA  R+   D   
Sbjct: 237 TFLDADGVMSITERMIRDLFNKMLDVDLG----------DFPRMTYAEAMKRF-GSDKPD 285

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +  +  D   L             +D    +
Sbjct: 286 LRNPLELTDVADLLANVDFKVFSGPANDPKGRV 318



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 47/146 (32%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKR 261
           + G      +        +     E   G ++        P   +            +  
Sbjct: 412 KLGEDFELLEGEWKPLWVVDFPMFEEFDGQLHAIHHPFTAPRGLTPDELKANPAEALSDA 471

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           +++    +EL      + +   Q   F     +      E        L  L    P  +
Sbjct: 472 YDMVLNGVELGGGSVRIHNEDMQSTVFNILGID----DEEAKNKFGFLLDALRFGAPPHA 527

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DRLVML+TGA +I +V+  P
Sbjct: 528 GLAFGLDRLVMLMTGATSIRDVMAFP 553


>gi|125525972|gb|EAY74086.1| hypothetical protein OsI_01974 [Oryza sativa Indica Group]
          Length = 559

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/430 (12%), Positives = 110/430 (25%), Gaps = 93/430 (21%)

Query: 3   QIPSQPWWN---RDF-HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +P         RD  H R R          R+ +  +   +F EN F+ + +  +  S 
Sbjct: 131 PLPKTKLTLENLRDVVHLRSRTNTIGAVARIRHQLACATHRFFDENGFLYVHTPIITTSD 190

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSP------------------------------ 82
                 +   +T     + + K L    +P                              
Sbjct: 191 CEGAGEMFQVTTLFSHAEKVEKELKENPAPSESDIDAARVVVKEKGDAVAQLKAAKASKQ 250

Query: 83  -------EFSCKKLLAAGEEKIFCF--AHAWRNG----------------EQGCLHQPEF 117
                  E +  K   +  E+         +R+                       Q E 
Sbjct: 251 EITAAVAELNKAKENVSRLEERSKLKPGIPYRDDGTVAYENDFFKRQAFLTVSGQLQVET 310

Query: 118 TMLEW--YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
                          +      +       +   +I      +    +E     + +   
Sbjct: 311 YACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFANLQDDMNCAERYVQYLCKWLL 370

Query: 176 RYANIDLGTTLDNPDQPDRHLLYL------------QAQQA-----GIRVAHDDTWSDIF 218
            +   D+   + N D+     L L            +A +        +  +   W    
Sbjct: 371 EHCREDMEFMVKNYDKTAIERLELVSSTPFQRISYTKAVELLKNVTDKKFENKVEWGIDL 430

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
           +      +   +      I+  YP    A       D +     ++    +       EL
Sbjct: 431 ASEHERYLTE-VIFKKPVIVYNYPKEIKAFYMRLNDDQKTVAAMDVLVPKV------GEL 483

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
           +   ++  R +      +       P  E +L        + SG  +GF+R+++  TG  
Sbjct: 484 VGGSQREERLDLLKTRIQDAGLPLEPY-EWYLDLRRFGSVKHSGFGLGFERMILFATGLE 542

Query: 338 NINEVIWTPF 347
           NI +VI  P 
Sbjct: 543 NIRDVIPFPR 552


>gi|319426437|gb|ADV54511.1| aspartyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 592

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R  + S++R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAQRLMFRAKVTSTVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R               +      E   +T  EA  R+   D     +  + 
Sbjct: 246 VMAKTEEMMRGLFLE----------MLNVDLGEFPRMTYNEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + + A      +D    +
Sbjct: 295 VDIADLLKEVEFAVFSAPANDEEGRV 320



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKR 261
           +AG   +           +     E   G  +        P   +A         R +  
Sbjct: 414 KAGEDFSLLQGEWRPLWVVDFPMFEKINGNFHAVHHPFTAPRGVTAAELEANPANRVSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      + +   Q   F    +      +E        L  L    P  +
Sbjct: 474 YDMVLNGCELGGGSVRIHNQEMQSAVF----RILGITDDEAKEKFGFLLEALRYGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 GLAFGLDRIIMLMTGASSIRDVMAFP 555


>gi|118602419|ref|YP_903634.1| aspartyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166225385|sp|A1AW56|SYD_RUTMC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118567358|gb|ABL02163.1| aspartyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 583

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 73/199 (36%), Gaps = 28/199 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R            L  R+ +   +RE+  E+ F++I++  L   +P     ++ 
Sbjct: 119 EVRLRYRYLDLRSDTMQNRLRLRSRVTRYMREFMDEHDFLDIETPFLTKATPEGARDYLV 178

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ +G E+ +     +R+ +     QPEFT L
Sbjct: 179 PSRTHSGKFFALPQ------SPQLFKQLLMMSGFERYYQIVKCFRDEDLRADRQPEFTQL 232

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S  ++M     + R   ++          +N +       IT A++ A+Y  +
Sbjct: 233 DVETSFMSENEIMTMMEKMTRGLFKLV---------INVDLGDNFPTITYADSMAKY-GL 282

Query: 181 DLGTTLDNPDQPDRHLLYL 199
           D      +        +  
Sbjct: 283 DRPDMRISMQIVSIDKIMQ 301



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 229 NLGINCCTILDRYP---APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            +G +       +P       A      A    +K ++L     E+      +     Q+
Sbjct: 432 EVGDDGSLNTTHHPFTAPSVDAKTLEKTATTALSKAYDLVINGSEVGGGSIRIHQIDMQK 491

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
                  +       E       FL  L    P   G+A G DRL+M++TGAN+I +V+ 
Sbjct: 492 TVL----KLLGISDQEIQDKFGFFLNALEYGCPPHGGMAFGLDRLMMIMTGANSIRDVVA 547

Query: 345 TPFSQS 350
            P +Q+
Sbjct: 548 FPKTQT 553


>gi|115436616|ref|NP_001043066.1| Os01g0372700 [Oryza sativa Japonica Group]
 gi|14587206|dbj|BAB61140.1| putative asparagine-tRNA ligase [Oryza sativa Japonica Group]
 gi|15408636|dbj|BAB64053.1| putative asparagine-tRNA ligase [Oryza sativa Japonica Group]
 gi|113532597|dbj|BAF04980.1| Os01g0372700 [Oryza sativa Japonica Group]
          Length = 559

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/430 (12%), Positives = 110/430 (25%), Gaps = 93/430 (21%)

Query: 3   QIPSQPWWN---RDF-HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +P         RD  H R R          R+ +  +   +F EN F+ + +  +  S 
Sbjct: 131 PLPKTKLTLENLRDVVHLRSRTNTIGAVARIRHQLACATHRFFDENGFLYVHTPIITTSD 190

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSP------------------------------ 82
                 +   +T     + + K L    +P                              
Sbjct: 191 CEGAGEMFQVTTLFSHAEKVEKELKENPAPSESDIEAARVVVKEKGDAVAQLKAAKASKQ 250

Query: 83  -------EFSCKKLLAAGEEKIFCF--AHAWRNG----------------EQGCLHQPEF 117
                  E +  K   +  E+         +R+                       Q E 
Sbjct: 251 EITAAVAELNKAKENVSRLEERSKLKPGIPYRDDGTVAYENDFFKRQAFLTVSGQLQVET 310

Query: 118 TMLEW--YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
                          +      +       +   +I      +    +E     + +   
Sbjct: 311 YACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFANLQDDMNCAERYVQYLCKWLL 370

Query: 176 RYANIDLGTTLDNPDQPDRHLLYL------------QAQQA-----GIRVAHDDTWSDIF 218
            +   D+   + N D+     L L            +A +        +  +   W    
Sbjct: 371 EHCREDMEFMVKNYDKTAIERLELVSSTPFQRISYTKAVELLKNVTDKKFENKVEWGIDL 430

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
           +      +   +      I+  YP    A       D +     ++    +       EL
Sbjct: 431 ASEHERYLTE-VIFKKPVIVYNYPKEIKAFYMRLNDDQKTVAAMDVLVPKV------GEL 483

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
           +   ++  R +      +       P  E +L        + SG  +GF+R+++  TG  
Sbjct: 484 VGGSQREERLDLLKTRIQDAGLPLEPY-EWYLDLRRFGSVKHSGFGLGFERMILFATGLE 542

Query: 338 NINEVIWTPF 347
           NI +VI  P 
Sbjct: 543 NIRDVIPFPR 552


>gi|78185800|ref|YP_378234.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|97196970|sp|Q3AVS9|SYD_SYNS9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78170094|gb|ABB27191.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 610

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 16/186 (8%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      R    L  R     + R +  +  FIE+++  L   +P      R +   
Sbjct: 129 RHRYLDLRRKRMNDNLRLRARTIQAARRFLEDEGFIEVETPVLTRSTPEG---ARDYVLP 185

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
             +         L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   +
Sbjct: 186 SRVCG--GDWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQPEFTQLDIEMS 243

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               EQ+++   ++I    +                      +T  +A  RY   D   T
Sbjct: 244 FMGEEQILQLNEDLICAIWKSVKG---------IELPRPFPRMTWHDAMERY-GTDRPDT 293

Query: 186 LDNPDQ 191
               + 
Sbjct: 294 RYGMEL 299



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 13/156 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +        +  F  ++   +              +P       ++     ++ 
Sbjct: 421 LAKELNLVKPDRQNDAWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNTDDLGSDPAQWA 480

Query: 260 --------KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
                   + ++L    +EL      + D   QR   +      +    E        + 
Sbjct: 481 TTLPKARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLE----EAQAQFGFLIN 536

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DR+VML+ G ++I + I  P
Sbjct: 537 ALDMGAPPHGGLAFGVDRMVMLLAGEDSIRDTIAFP 572


>gi|171912679|ref|ZP_02928149.1| aspartyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 601

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 67/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    L  R+ +  + R+Y   + F+E+++  L   +P      R F     +    
Sbjct: 137 RRPRMTRNLRTRHRVTKATRDYLDAHGFVEVETPILSKSTPEG---ARDFLVPSRLS--- 190

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  +P+   + L+ AG E+ F  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 191 PGKFYALPQAPQQYKQLLMVAGLERYFQIAKCFRDEDLRADRQPEFTQVDIEMSFPTEED 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +            +         +T  EA  RY  ID   T    + 
Sbjct: 251 IYNLVEGLLKDMFKAG---------RDVEIPLPFPRMTWKEAMDRY-GIDKPDTRFGNEI 300

Query: 192 PD 193
            D
Sbjct: 301 TD 302



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 15/126 (11%)

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E            R    +  L             +++     EL      + +   Q  
Sbjct: 446 EDAKWCAVHHPFTRPKTEDIPLLEEGKYSEVRAIAYDVVLNGCELGGGSLRIHESDLQAK 505

Query: 287 RF------EKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
            F      E+E +       E +             P   G+A+G DR++ML  G ++I 
Sbjct: 506 MFSVLGVSEEEQKIMFSHILEAFQF---------GAPPHGGLALGLDRIIMLAAGEDSIR 556

Query: 341 EVIWTP 346
           EVI  P
Sbjct: 557 EVIAFP 562


>gi|89100800|ref|ZP_01173653.1| aspartyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084503|gb|EAR63651.1| aspartyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 591

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 27/229 (11%), Positives = 69/229 (30%), Gaps = 23/229 (10%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R               R+ +  S+R+Y     F++I++  L   +P     ++ 
Sbjct: 124 DVRLKYRYLDFRRPVMFETFKMRHQVTKSIRDYLDSEGFLDIETPILTKSTPEGARDYLV 183

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 184 PSRVHPGEFYALPQ------SPQIFKQLLMVGGIERYYQIARCFRDEDLRADRQPEFTQI 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S E ++     ++    +       +            +     +   R+A  
Sbjct: 238 DIETSFMSQEDIISMTEQMMTKVMKEVKGIDITLPIQRMTYQEAMDRYGSDKPDTRFAME 297

Query: 181 DLGTTLDNPDQPDRHLLYLQ-----AQQAGIRVAHDDTWSDIFSRILIE 224
            +  +    +   +            +   ++ A           +   
Sbjct: 298 LVNLSETLSNSGFKVFAGAISSGGEVKAINVKDAASKYSRKDIDALTEF 346



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 51/164 (31%), Gaps = 11/164 (6%)

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCTILDRYPAPESA 247
           D+       L A +  +          +F+ +      +              +P     
Sbjct: 398 DKKSVVADALGALRLKLGKELGLIDQSLFNFLWVTEWPLLEFDEEEGRYYAAHHPFTMPN 457

Query: 248 LANIYPADPR----FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
             ++   D        + ++L     EL      + +   Q   F      K+    E  
Sbjct: 458 REDLEYLDTDPSKVKAQAYDLVLNGYELGGGSLRIFEREIQEKMFSVLGFSKE----EAR 513

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 L       P   GIA+G DRLVML+ G++N+ + I  P
Sbjct: 514 EQFGFLLEAFEYGTPPHGGIALGLDRLVMLLAGSSNLRDTIAFP 557


>gi|302798054|ref|XP_002980787.1| hypothetical protein SELMODRAFT_154078 [Selaginella moellendorffii]
 gi|300151326|gb|EFJ17972.1| hypothetical protein SELMODRAFT_154078 [Selaginella moellendorffii]
          Length = 555

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 28/185 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNET-HI 59
           +   R R            L  R+ I   +R Y  + + F+E+++  L   +P     ++
Sbjct: 85  EVRLRYRHLDLRRPQLNANLRLRHRIVKLMRRYLEDVHGFVEVETPILSRSTPEGARDYL 144

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
                +      + +      SP+   + L+ +G ++ F FA  +R+ +     QPEFT 
Sbjct: 145 VPSRVQPATFYALPQ------SPQLFKQMLMVSGFDRYFQFARCFRDEDLRADRQPEFTQ 198

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A    E +++   ++IR                          +T AEA ++Y +
Sbjct: 199 LDMELAFTPLEDMLELNEDLIRLVFREIKGVELP---------DPFPRLTYAEAMSKYGS 249

Query: 180 IDLGT 184
               T
Sbjct: 250 DKPDT 254



 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 46/140 (32%), Gaps = 12/140 (8%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           D + +DI         E N        L  +P       ++          +++    +E
Sbjct: 391 DKSRNDILWITDFPMFEWNDTEKRLEAL-HHPFTAPRPEDMKDLSSARALAYDMVYNGVE 449

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGF 326
           +      +     Q+   E                ++ F   L  L    P   GIA G 
Sbjct: 450 IGGGSLRIHRRDVQQKVLE-------ASGLSAQEAEDKFGYLLEALELGAPPHGGIAYGV 502

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DRLVML+ G  +I +VI  P
Sbjct: 503 DRLVMLLAGEKSIRDVIAFP 522


>gi|254495274|ref|ZP_05108198.1| aspartyl/glutamyl-tRNA amidotransferase subunit B/aspartyl-tRNA
           synthetase [Polaribacter sp. MED152]
 gi|85819628|gb|EAQ40785.1| aspartyl/glutamyl-tRNA amidotransferase subunit B/aspartyl-tRNA
           synthetase [Polaribacter sp. MED152]
          Length = 1112

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 70/194 (36%), Gaps = 4/194 (2%)

Query: 13  DFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
             +   R  ++ R+ +   LR+   E +F+EI++  L  + G +   R F      Q   
Sbjct: 652 HRNDEVRKAIVNRHRVIKLLRDILDEEEFLEIETPIL--TAGTDEGAREFIVPTRKQ--A 707

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  +P+   + L+  G EK F  A  +R+ +     QPEFT L+   A+ S +Q+
Sbjct: 708 GSFYTLPQAPQQFKQMLMVGGFEKYFQIARCFRDEDSRGDRQPEFTQLDIEMAYASMQQI 767

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     +     +    K +  +      + E       +       +++    D     
Sbjct: 768 IDLNTKMFNKIVQKIYGKKWILRPFEVITYKEAMDKYGCDRPDLRYGLEMQDITDIVKDT 827

Query: 193 DRHLLYLQAQQAGI 206
              +        GI
Sbjct: 828 TFQVFSKPIDDGGI 841



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 46/153 (30%), Gaps = 3/153 (1%)

Query: 194  RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
            R  +    +    +        D       ++       N  ++   Y   +        
Sbjct: 933  RQEMGRILKLINPKELRPAWVVDFPMFEKTDEGRWTFTHNPFSMPAVYDLEKHMNGKEDE 992

Query: 254  ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                  ++++L     E+                ++     K+++      + + F    
Sbjct: 993  IGTIIAQQYDLILNGYEIGGGSVRAHKSEILEATYKNMGYNKEEMLKSVGTMYKAF---Q 1049

Query: 314  TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA G DRL+M++    +I EV+  P
Sbjct: 1050 YGAPPHGGIAWGVDRLMMILEKKASIREVMAFP 1082


>gi|77918645|ref|YP_356460.1| aspartyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|97196766|sp|Q3A5R7|SYD_PELCD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77544728|gb|ABA88290.1| aspartyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 596

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 83/238 (34%), Gaps = 26/238 (10%)

Query: 11  NRDFHYR-RRPFLL----KRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFS 63
            +  +   RRP L      R+ +   +R Y  +  FIE+++  L   +P     ++    
Sbjct: 133 LKHRYLDLRRPALQSNLVLRHKVAQIVRNYLNDTGFIEVETPVLTKSTPEGARDYLVPSR 192

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
               +   + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++  
Sbjct: 193 VNPGMFYALPQ------SPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDCE 246

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +    + +M     +I    +       S              IT  E+ AR+  +D  
Sbjct: 247 LSFVDRQDIMDIMEAMIATVFQQILGIELS---------LPMPRITYTESMARF-GVDNP 296

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               + +  +   +   A+  G +V  D        ++L  K   +        L  +
Sbjct: 297 DMRFDLELVE---ISNIAKDCGFKVFADAVKKGGIVKLLNAKQCASFSRKEIDDLTDF 351



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 48/146 (32%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           Q+ G+    D  ++ +    L+E                 P  E              K 
Sbjct: 422 QKLGLARKDDFRFAWVTDFPLLEWDGEARRHVAVHHPFTAPLDEDIALLDGDPGSARAKA 481

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           ++L     E+      + +   Q   F            E        L  L    P   
Sbjct: 482 YDLVLNGSEIGGGSIRIHNREIQNKMF----SLMGITAEEAEEKFGFLLGALSYGAPPHG 537

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DRL+M++TG+++I +VI  P
Sbjct: 538 GIAFGLDRLMMILTGSDSIRDVIAFP 563


>gi|302661817|ref|XP_003022571.1| hypothetical protein TRV_03310 [Trichophyton verrucosum HKI 0517]
 gi|291186524|gb|EFE41953.1| hypothetical protein TRV_03310 [Trichophyton verrucosum HKI 0517]
          Length = 549

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 114/392 (29%), Gaps = 55/392 (14%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS 52
           + Q+P         H R R          R+     + E F  +    F+++    +  S
Sbjct: 161 LRQLP---------HLRLRTPFNALLSRLRSEFIYQVTEEFRSHRHLNFVQVQPPLITSS 211

Query: 53  ---PGNETH-IRAFST---ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                 E   IR       E    +  + P YL  S +   +   AA    ++  +  +R
Sbjct: 212 DCEGAGEVFSIRPRDVVIEEGKAVEFFKSPKYLTVSSQLHLEAY-AAELGNVWTLSPTFR 270

Query: 106 NGEQG-CLHQPEFTMLEWYRAHESY-EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
             +     H  EF MLE   ++    E L      ++R   +   +   + +  +     
Sbjct: 271 AEKSDTPRHLSEFYMLEAEMSYMDSLEPLTAFVETLLRNMTQRVYKSPVAQELFSFKATD 330

Query: 164 EP-EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG-IRVAHDDTWSDIFSRI 221
           +  +  + A+   R+  +  G                +A   G +      +WS      
Sbjct: 331 DLTKDTSNADLEKRWMALMEGPRWPRITFAHAIKHLHEAVNTGRVTFEFSPSWSGGLQLE 390

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALAN-----IYPADPRFTKRFELYACNI-ELCNAC 275
             + +   +G      +  YP                        F+L    I E+    
Sbjct: 391 HEKFLVDTIGKGLPIFVTDYPKAVKPFYMLPSSGSSDESGETVACFDLLLPEICEVVGGS 450

Query: 276 DELL--DPIEQRHRFEKEMQEKKKIYNETYPIDE-----DFLACLT-------------E 315
                  P+ Q  R    ++ K      +  +D        LA                 
Sbjct: 451 LREHRLSPLIQNMREHGLLKLKDSTPEPSSTVDAKAPYPHLLANEELGSIQWYADLRRWG 510

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +GFDR V  + G +++ +++  P 
Sbjct: 511 TVPHGGFGLGFDRFVGYLAGVSSLRDLVPFPR 542


>gi|302756879|ref|XP_002961863.1| hypothetical protein SELMODRAFT_140340 [Selaginella moellendorffii]
 gi|300170522|gb|EFJ37123.1| hypothetical protein SELMODRAFT_140340 [Selaginella moellendorffii]
          Length = 555

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 28/185 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNET-HI 59
           +   R R            L  R+ I   +R Y  + + F+E+++  L   +P     ++
Sbjct: 85  EVRLRYRHLDLRRPQLNANLRLRHRIVKLMRRYLEDVHGFVEVETPILSRSTPEGARDYL 144

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
                +      + +      SP+   + L+ +G ++ F FA  +R+ +     QPEFT 
Sbjct: 145 VPSRVQPATFYALPQ------SPQLFKQMLMVSGFDRYFQFARCFRDEDLRADRQPEFTQ 198

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   A    E +++   ++IR                          +T AEA ++Y +
Sbjct: 199 LDMELAFTPLEDMLELNEDLIRLVFREIKGVELP---------DPFPRLTYAEAMSKYGS 249

Query: 180 IDLGT 184
               T
Sbjct: 250 DKPDT 254



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 46/140 (32%), Gaps = 12/140 (8%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           D + +DI         E N        L  +P       ++          +++    +E
Sbjct: 391 DKSRNDILWITDFPMFEWNDAEKRLEAL-HHPFTAPRPEDMKDLSSARALAYDMVYNGVE 449

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGF 326
           +      +     Q+   E                ++ F   L  L    P   GIA G 
Sbjct: 450 IGGGSLRIHRRDVQQKVLE-------ASGLSAQEAEDKFGYLLEALELGAPPHGGIAYGV 502

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DRLVML+ G  +I +VI  P
Sbjct: 503 DRLVMLLAGEKSIRDVIAFP 522


>gi|317496044|ref|ZP_07954404.1| aspartyl-tRNA synthetase [Gemella moribillum M424]
 gi|316913619|gb|EFV35105.1| aspartyl-tRNA synthetase [Gemella moribillum M424]
          Length = 590

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 23/197 (11%)

Query: 4   IPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET 57
           + S+    +  +   R       L  R+ I  + R+Y   N F+++++  L   +P    
Sbjct: 122 LSSEELRLKYRYLDLRRTELAEVLHLRSKITKATRDYLDNNMFVDVETPILTKSTPEGAR 181

Query: 58  -HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            ++            + +      SP+   + L+ AG ++ +  A  +R+ +     QP+
Sbjct: 182 DYLVPSRVHPGEFYALPQ------SPQLFKQLLMVAGFDRYYQVARCFRDEDLRADRQPD 235

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT ++   +  S E+++     +I    +              +  +    +   EA  R
Sbjct: 236 FTQIDMEMSFMSQEEILTMIEGLIAHVMKEVKG---------IDVVTPFPRLDYEEAMER 286

Query: 177 YANIDLGTTLDNPDQPD 193
           +   D   T    +  D
Sbjct: 287 F-GSDKPDTRFGMELKD 302



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 13/164 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A    +       +  + +  L+E  E     +        P  E         
Sbjct: 411 ALRQKLAADLDLIDKDKYNYLWVVNWPLLEYDEERGKYSAAHHPFTMPKIEDVELLETAP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +  + + +++     EL      + D   Q   F+     E + K +            L
Sbjct: 471 EKAYAQAYDIVLNGYELGGGSIRIYDKDVQSSMFKALGFSEEEAKSQFG--------FLL 522

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 +P   G A+G DR VML+ G +N+ + I  P + +  +
Sbjct: 523 DAFEYGVPPHGGCALGLDRFVMLLAGRDNLRDTIAFPKTAAAAD 566


>gi|308063594|gb|ADO05481.1| aspartyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 577

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 395 DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIE 454

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 455 CKDLEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQKKFGFLL 510

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 511 EALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 67/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S   +M    ++++   +              N     + +   EA   Y 
Sbjct: 231 QIDAEMSFCSENDVMGVVEDLLQEIFKAIGH----------NISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNAIFSNIAQDPKNKRI 319


>gi|37526023|ref|NP_929367.1| aspartyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|46577166|sp|Q7MB41|SYD_PHOLL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|36785453|emb|CAE14400.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) (asprs)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 590

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S    + +   + R            L  R  I S +R +     F++I++  L   
Sbjct: 109 PLDSNQTNSEEQRLKYRYIDLRRPEMANRLKTRAKITSFVRRFMDNQGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  + EQ+ +    +IR      +                   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAEQVREMMEKMIRELWFEIDGVDLGH----------FPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AE   R+   D     +  +  D   L    + +      +D+   +
Sbjct: 273 AEVMRRF-GSDKPDLRNPLELVDVADLVKDVEFSVFAEPANDSKGRV 318



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   SA              +++     E+      +     Q+  F
Sbjct: 441 EGGLTAMHHPFTSPCNMSAAELAQDPVSAIANAYDMVINGYEVGGGSVRIHRNEMQQAVF 500

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E+E QEK              L  L    P  +G+A G DRLVML+TG +NI +
Sbjct: 501 RILGINEQEQQEKFG----------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRD 550

Query: 342 VIWTP 346
           VI  P
Sbjct: 551 VIAFP 555


>gi|325842220|ref|ZP_08167637.1| aspartate--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489687|gb|EGC92046.1| aspartate--tRNA ligase [Turicibacter sp. HGF1]
          Length = 585

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 70/198 (35%), Gaps = 27/198 (13%)

Query: 11  NRDFHYR------RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
             D   +      RRP      + R+ I  S+R Y     FIE+++  L   +P     +
Sbjct: 120 LEDTRLKYRYLDLRRPMMQKNFILRHNILKSVRSYLDSQDFIEVETPYLNKSTPEGARDY 179

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT
Sbjct: 180 LVPSRVHEGEFYALPQ------SPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQPEFT 233

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  + E++M     ++    +                      ++  EA  RY 
Sbjct: 234 QIDIETSFLTQEEIMNLVEEMLVKMMKDVKGLDIP---------RPFPRLSYEEAMGRYG 284

Query: 179 NIDLGTTLDNPDQPDRHL 196
           +    T  +    P  H+
Sbjct: 285 SDKPDTRFEMELIPLNHV 302



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    L E  E              P+ ++       +     
Sbjct: 412 LAKELGVIDESKFNFLWVIDWPLFEYDEEAGRFFAAHHPFTMPSLDTLDTFDTDSHNAKA 471

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           + +++     EL      +  P  Q   FE     K+    E        +       P 
Sbjct: 472 QAYDIVLNGYELGGGSLRIYRPDIQSRMFEALGFTKE----EAEEQFGFLMNAFKYGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A+G DR+ M++TG+ ++ +VI  P
Sbjct: 528 HGGLALGLDRIAMILTGSQSLRDVIAFP 555


>gi|228987654|ref|ZP_04147768.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228772114|gb|EEM20566.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 591

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP        R+ +  ++R +    +F+E+++  L   +P     ++            
Sbjct: 135 RRPVMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLVPSRVHDGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 195 LPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    + A     S         +    +  A+A ARY   D   T    + 
Sbjct: 249 ILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 299 IDLSEFAAGC 308



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|308061948|gb|ADO03836.1| aspartyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 577

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 395 DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIE 454

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 455 CKDLEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQKKFGFLL 510

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 511 EALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 67/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S   +M    ++++   +              N     + +   EA   Y 
Sbjct: 231 QIDAEMSFCSENDVMGVVEDLLQEIFKAIGH----------NISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNAIFSNIAQDPKNKRI 319


>gi|332288351|ref|YP_004419203.1| aspartyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330431247|gb|AEC16306.1| aspartyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 589

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 73/248 (29%), Gaps = 21/248 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSYVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I                       +   +T AEA  R+   D     +  + 
Sbjct: 245 VRAIMEEMIHGLWLEILGVDLG----------KFPIMTYAEAMRRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI--FSRILIEKIEPNLGINCCTILDRYPAPESALA 249
            D   L  +          +D    I          I           +  Y A   A  
Sbjct: 294 VDVADLLKEVDFKVFSGPANDAKGRIAAIRVPNGSHITRKQIDEYTQFVTIYGAKGLAWM 353

Query: 250 NIYPADPR 257
            +   +  
Sbjct: 354 KVNDVNAG 361



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 9/121 (7%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         PA  +               +++     E+      + D   Q+  F
Sbjct: 442 EGGLAAMHHPFTSPAHVTPEELEKSPVDAVANAYDMVINGYEVGGGSVRIFDQKMQQTVF 501

Query: 289 EKEMQEKKKIYNETYPIDED--FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 +    NE    ++    L  L    P  +G+A G DRL ML+TG  NI +VI  
Sbjct: 502 ------RILGINEQEQYEKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTENIRDVIAF 555

Query: 346 P 346
           P
Sbjct: 556 P 556


>gi|312083484|ref|XP_003143881.1| 63kd antigen [Loa loa]
 gi|307760954|gb|EFO20188.1| 63kd antigen [Loa loa]
          Length = 528

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 99/321 (30%), Gaps = 38/321 (11%)

Query: 32  LREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
           +RE+F    ++E+   +L      G  T        L   D+  +P YL  S +   +  
Sbjct: 234 MREHFYNAGYVEVAPPTLVQTQVEGGST--------LFKFDYFGEPSYLTQSSQLYLETC 285

Query: 90  LAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           +          +      +     H  E+  +E      + + LM     ++    +   
Sbjct: 286 IPPLAMSFALLSLTGVAEKSRTRRHLAEYAHVEAECPFITLDDLMMKIEELVCDTVDRLL 345

Query: 149 QKIFSFQNVNC-NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
               + + +   NP  EP          +                   + +LQ       
Sbjct: 346 ADEEARKLLEHVNPKFEPPKRPFLRMQYK-----------------DAIKWLQEHNVQNE 388

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYA 266
             +  ++ +  +      +     IN   +L+R+P+   +        D   T+  +L  
Sbjct: 389 FGNSFSYGNDIAEAAERYMTDT--INKPILLNRFPSEIKAFYMQRDAQDNTLTESVDLLM 446

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGF 326
             +       E++    +  +F++  +  +    +  P       CL       G  +G 
Sbjct: 447 PGV------GEIVGGSMRIWKFDELSKAFENAEIDPKPYYWYLDQCLFGACPHGGYGLGL 500

Query: 327 DRLVMLVTGANNINEVIWTPF 347
           +R +  +T   +I +V   P 
Sbjct: 501 ERFICWLTNTYHIRDVCLYPR 521


>gi|293375174|ref|ZP_06621461.1| aspartate--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646211|gb|EFF64234.1| aspartate--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 585

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 70/198 (35%), Gaps = 27/198 (13%)

Query: 11  NRDFHYR------RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
             D   +      RRP      + R+ I  S+R Y     FIE+++  L   +P     +
Sbjct: 120 LEDTRLKYRYLDLRRPMMQKNFILRHNILKSVRSYLDSQDFIEVETPYLNKSTPEGARDY 179

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT
Sbjct: 180 LVPSRVHEGEFYALPQ------SPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQPEFT 233

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  + E++M     ++    +                      ++  EA  RY 
Sbjct: 234 QIDIETSFLTQEEIMNLVEEMLVKMMKDVKGLDIP---------RPFPRLSYEEAMGRYG 284

Query: 179 NIDLGTTLDNPDQPDRHL 196
           +    T  +    P  H+
Sbjct: 285 SDKPDTRFEMELIPLNHV 302



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    L E  E              P+ ++       +     
Sbjct: 412 LAKELGLIDESKFNFLWVIDWPLFEYDEEAGRFFAAHHPFTMPSLDTLDTFDTDSHNAKA 471

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           + +++     EL      +  P  Q   FE     K+    E        +       P 
Sbjct: 472 QAYDIVLNGYELGGGSLRIYRPDIQSRMFEALGFTKE----EAEEQFGFLMNAFKYGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A+G DR+ M++TG+ ++ +VI  P
Sbjct: 528 HGGLALGLDRIAMILTGSQSLRDVIAFP 555


>gi|317036109|ref|XP_001397625.2| asparaginyl-tRNA synthetase Slm5 [Aspergillus niger CBS 513.88]
          Length = 543

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 66/404 (16%), Positives = 110/404 (27%), Gaps = 67/404 (16%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFV---ENQFIEIDSMSLQYS 52
           + QIP         H R R          R+     L   F       F+++    +  S
Sbjct: 143 LRQIP---------HLRIRTPFNSLLSRFRSECLYQLGNVFRHAPNGGFVQVHPPLITSS 193

Query: 53  ---PGNETHIR-----AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
                 ET          +T        R P YL  S +   +   AA    ++  +  +
Sbjct: 194 DCEGAGETFTVLPREAVGTTPADGDHFFRAPKYLTVSSQLHLEAY-AAELGNVWTMSPMF 252

Query: 105 RNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNII------RCAAEVANQKIFSFQNV 157
           R  +     H  EF MLE           + D +  +      R       Q+I + +  
Sbjct: 253 RAEKSDTPRHLSEFYMLEAEANFMDNLDTLTDLVEYLLRDLTRRLYDTPIGQEILTTKRP 312

Query: 158 NCNPFSEPEYIT-VAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
             +   E    T  A+   R+   ID              LL     +      +  TW 
Sbjct: 313 GESNSEELATATDPADLRQRWQDMIDGPKWRRMTYTEAIELLQDAVAKDSATFEYPPTWE 372

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
                   + I   L       +  YP P              T   E  AC   L    
Sbjct: 373 GGLQLEHEKYIVDVLNHGHPVFVTDYPKPIKPFYMAPSHASAATTHGETVACFDLLLPEV 432

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYN-------------------ETYPIDEDFL------ 310
            E+     + HR  + +Q  ++                      +   +    L      
Sbjct: 433 SEVAGGSLREHRLPEIIQNMRQHGLIKNLAASGDGTDPATPTFQQAEELYPHLLPGEDLG 492

Query: 311 -----ACLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                A L         G  +GFDR +  + G +++ +++  P 
Sbjct: 493 HLQWYADLRRWGTAPHGGFGLGFDRFLGYLAGVSSVRDIVAFPR 536


>gi|56477896|ref|YP_159485.1| aspartyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|62287525|sp|Q5P280|SYD_AZOSE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56313939|emb|CAI08584.1| Aspartyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 599

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 65/192 (33%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R  +  + R +     FI++++  L   +P     ++            
Sbjct: 131 RRPQMQKNLMLRYKVAMAFRRFLDAQGFIDVETPMLTKSTPEGARDYLVPSRVHP----- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +     +
Sbjct: 186 -GQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQVDIETSFLDEAE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR     A               +    +T AEA  RY +      +     
Sbjct: 245 ITAIMEDMIRYVFREALAVELP---------NPFPRMTHAEAMRRYGSDKPDLRVTLELT 295

Query: 192 PDRHLLYLQAQQ 203
                +   A +
Sbjct: 296 DVTDAVQDVAFK 307



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G       T   +    + E  + +     C      P  E         
Sbjct: 410 ALRTKLGHEKGYVSGAAWTPVWVVDFPMFEYDDESKRWVACHHPFTAPKDEHVELLESAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K ++L     E+      +     Q   F            E        L  L 
Sbjct: 470 GECLAKAYDLALNGWEIGGGSVRIHRADMQSKVFRALNI----GDEEAQLKFGFLLDALK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DR+V L+TGA +I +VI  P
Sbjct: 526 YGAPPHGGLAFGLDRVVTLMTGAESIRDVIAFP 558


>gi|300786628|ref|YP_003766919.1| asparaginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299796142|gb|ADJ46517.1| asparaginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 336

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 100/350 (28%), Gaps = 47/350 (13%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAFS 63
           P +   +       R  L  ++ + +++RE+     F E+    +           +   
Sbjct: 18  PREHLSSP----VTRSVLRIQHRMLTAVREFLSARGFTELLLPIIGPVTDPGARGAKQVD 73

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ----GCLHQPEFTM 119
            +     +      L TS     +  L    +KIFC A   R           H  EF  
Sbjct: 74  IDFYGHRYK-----LMTSAILYKQAALT-TFDKIFCIAPNVRLEPVETASTDRHLVEFHQ 127

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++   A  S +Q+ +    ++R                      + + +        +A 
Sbjct: 128 IDVEVADASRDQITRLVEELVRTVIRDV----------TAALPDDFDRLGR--DTGAFAG 175

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +  G+            L             D     + SR                 + 
Sbjct: 176 LLTGSFDRRTHTAAVADLRDLGHDQNPDGELDWAGEALLSRKAS----------KPFFVT 225

Query: 240 RYPA-PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKK 297
            YP           P  P   + F+L A          EL    E+ H +   + + ++ 
Sbjct: 226 DYPKGSRGFYDRESPEHPGRLRNFDLIAP-----EGYGELCSGSEREHDYATIVTRMRET 280

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             N        +L  +   +P S+G  +G +RL   + G  ++ E    P
Sbjct: 281 GENPAKY--AWYLRMVRDGIPPSAGFGIGLERLTRYLAGLASVREASAFP 328


>gi|259046696|ref|ZP_05737097.1| aspartate--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036592|gb|EEW37847.1| aspartate--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 587

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 81/222 (36%), Gaps = 22/222 (9%)

Query: 5   PSQPWWNRDFHY--RRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET- 57
           PS+    +  +   RRRP L     R+    S+REY     +I++++  L   +P     
Sbjct: 123 PSEELRLKYRYLDIRRRPVLENLRLRHKTTKSIREYLDGEGYIDVETPILAKSTPEGARD 182

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
           ++            + +      SP+   + L+ AG ++ +     +R+ +     QPEF
Sbjct: 183 YLVPSRVHEGSFYALPQ------SPQTFKQLLMGAGLDRYYQIVRCFRDEDLRGDRQPEF 236

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T ++   +  S E++ +    ++         K      ++    +    I+ AEA ARY
Sbjct: 237 TQVDIETSFLSAEEIQEMMEGLL---------KKVMKDTLDVEVQTPFPRISFAEAMARY 287

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            N    T  D        ++     +       +     + +
Sbjct: 288 GNDKPDTRFDLELIDVSDIMKESDLKVFSSCIENGGEVKVLN 329



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 53/153 (34%), Gaps = 5/153 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +   +   +  +    L+E                 P  E   A I        + 
Sbjct: 417 KKHNLIDTNKFNFLWVVDWPLLEHDAEEDRYVAMHHPFTRPVSEDFQALIDDPAGAKAQA 476

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   F+     K+    E+       L  L    P   
Sbjct: 477 YDIVLNGYELGGGSLRIYRRNMQEAMFKVLGFTKESA--ESQF--GFLLDALDYGFPPHG 532

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           GIA+G DRLVML+ G +NI EVI  P + S  +
Sbjct: 533 GIALGLDRLVMLLAGEDNIREVIAFPKNSSAVD 565


>gi|312977239|ref|ZP_07788987.1| aspartate--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|310895670|gb|EFQ44736.1| aspartate--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 617

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 66/196 (33%), Gaps = 8/196 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I  +  E+F EN FI+I++  L + SP     ++            
Sbjct: 136 RRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMEMSFADEET 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY  +    +    D 
Sbjct: 250 IQSYTEGLLKKIMKDVKGIDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDLSPIFKDS 309

Query: 192 PDRHLLYLQAQQAGIR 207
             +      A    ++
Sbjct: 310 DFKVFSGAIADGGFVK 325



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ GI       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAKETGIVPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q + F+     KK+ Y E +      +  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAY-EQFGY---LMDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V   P
Sbjct: 526 MGFPPHAGLAIGLDRFAMMLADKDNIRDVSAFP 558


>gi|327183446|gb|AEA31893.1| aspartyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 617

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 66/196 (33%), Gaps = 8/196 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I  +  E+F EN FI+I++  L + SP     ++            
Sbjct: 136 RRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMEMSFADEET 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY  +    +    D 
Sbjct: 250 IQGYTEGLLKKIMKDVKGIDLKTPIKRITWTDAMNKYGSDKPDTRYGMLIHDLSSIFKDS 309

Query: 192 PDRHLLYLQAQQAGIR 207
             +      A    ++
Sbjct: 310 DFKVFSGAIADGGFVK 325



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ GI       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q + F+     KK+ Y E +      +  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAY-EQFGY---LMDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V+  P
Sbjct: 526 MGFPPHAGLAIGLDRFAMMLANKDNIRDVLAFP 558


>gi|315038169|ref|YP_004031737.1| aspartyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276302|gb|ADQ58942.1| aspartyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 617

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 66/196 (33%), Gaps = 8/196 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I  +  E+F EN FI+I++  L + SP     ++            
Sbjct: 136 RRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMEMSFADEET 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY  +    +    D 
Sbjct: 250 IQGYTEGLLKKIMKDVKGIDLKTPIKRITWTDAMNKYGSDKPDTRYGMLIHDLSSIFKDS 309

Query: 192 PDRHLLYLQAQQAGIR 207
             +      A    ++
Sbjct: 310 DFKVFSGAIADGGFVK 325



 Score = 91.6 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ GI       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q + F+     KK+ Y E +      +  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAY-EQFGY---LMDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V+  P
Sbjct: 526 MGFPPHAGLAIGLDRFAMMLADKDNIRDVLAFP 558


>gi|148244522|ref|YP_001219216.1| aspartyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326349|dbj|BAF61492.1| aspartyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 584

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 71/199 (35%), Gaps = 28/199 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R            L  R+ +   +R++  ++ F++I++  L   +P     ++ 
Sbjct: 120 EIRLRYRYLDLRNNAMQKRLHLRSRVTHYIRKFMDKHDFLDIETPFLTKATPEGARDYLV 179

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ +G E+ +     +R+ +     QPEFT L
Sbjct: 180 PSRTHPGKFFALPQ------SPQLFKQLLMMSGFERYYQIVKCFRDEDLRADRQPEFTQL 233

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  +  ++M     + R   +           +N +  ++   IT  +A  +Y  +
Sbjct: 234 DIETSFMNENEIMTIMERMTRGLFKSV---------INVDLGNKFPTITYEDAMEKY-GL 283

Query: 181 DLGTTLDNPDQPDRHLLYL 199
           D               L  
Sbjct: 284 DCPDIRIPIQIISIDKLMK 302



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 52/150 (34%), Gaps = 10/150 (6%)

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCT--ILDRYP---APESALANIYPADPRFTKR 261
           ++A D    D     +     P  GIN         +P              A   F++ 
Sbjct: 409 KIAKDLNLFDTQWAPIWVVDFPMFGINDNGSLNATHHPFTAPIVDKETLKQTAKTAFSRA 468

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           ++L     E+      +     Q+       +       E        L  L    P   
Sbjct: 469 YDLVINGSEIGGGSIRIHQVEMQKTVL----KLLGISNQEAQDKFGFLLDALEYGCPPHG 524

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           G+A G DRLVM++TG +NI +VI  P +Q+
Sbjct: 525 GMAFGLDRLVMIMTGTDNIRDVIAFPKTQT 554


>gi|256843055|ref|ZP_05548543.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256614475|gb|EEU19676.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
          Length = 617

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 66/196 (33%), Gaps = 8/196 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I  +  E+F EN FI+I++  L + SP     ++            
Sbjct: 136 RRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMEMSFADEET 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY  +    +    D 
Sbjct: 250 IQSYTEGLLKKIMKDVKGIDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDLSPIFKDS 309

Query: 192 PDRHLLYLQAQQAGIR 207
             +      A    ++
Sbjct: 310 DFKVFSGAIADGGFVK 325



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ GI       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q + F+     KK+ Y E +      +  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAY-EQFGY---LMDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V   P
Sbjct: 526 MGFPPHAGLAIGLDRFAMMLADKDNIRDVSAFP 558


>gi|238751587|ref|ZP_04613077.1| Aspartyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238710149|gb|EEQ02377.1| Aspartyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 598

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGIDLGDFPVMTFAEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDAKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLTAMHHPFTAPKDMSPEQLAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQQVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 GILGINEHEQREKFG--------FLLDALKYGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|227879061|ref|ZP_03996951.1| aspartyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256850293|ref|ZP_05555722.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262046028|ref|ZP_06018992.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381307|ref|ZP_06627310.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|227861356|gb|EEJ68985.1| aspartyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256712930|gb|EEU27922.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260573987|gb|EEX30543.1| aspartyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290922123|gb|EFD99122.1| aspartyl-tRNA synthetase [Lactobacillus crispatus 214-1]
          Length = 617

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 66/196 (33%), Gaps = 8/196 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I  +  E+F EN FI+I++  L + SP     ++            
Sbjct: 136 RRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMEMSFADEET 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY  +    +    D 
Sbjct: 250 IQSYTEGLLKKIMKDVKGIDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDLSPIFKDS 309

Query: 192 PDRHLLYLQAQQAGIR 207
             +      A    ++
Sbjct: 310 DFKVFSGAIADGGFVK 325



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ GI       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q + F+     KK+ Y E +      +  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAY-EQFGY---LMDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V   P
Sbjct: 526 MGFPPHAGLAIGLDRFAMMLADKDNIRDVSAFP 558


>gi|308182777|ref|YP_003926904.1| aspartyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308064962|gb|ADO06854.1| aspartyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 577

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 395 DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIE 454

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 455 CKDLEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQKKFGFLL 510

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +N+I +VI  P
Sbjct: 511 EALKFGAPPHGGFAIGFDRLIMLMTKSNSIRDVIAFP 547



 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 60/194 (30%), Gaps = 28/194 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLHAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQEIFKAIGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQP 192
           +       + P   
Sbjct: 281 SDKPDLRFELPLIE 294


>gi|229175077|ref|ZP_04302594.1| Aspartyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608373|gb|EEK65678.1| Aspartyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 591

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 74/208 (35%), Gaps = 31/208 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R               R+ +  ++R +    +F+E+++  L   +P     ++ 
Sbjct: 124 DVRLKYRYLDLRRPAMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 184 PSRVHDGEFYALPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQI 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + ++++     ++    + A     S         +    +  A+A ARY   
Sbjct: 238 DIEASFLTQDEILDMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARY-GS 287

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
           D   T    +  D   L   A   G +V
Sbjct: 288 DKPDTRFEMELTD---LSEFAVGCGFKV 312



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|224476727|ref|YP_002634333.1| aspartyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254781751|sp|B9DNF8|SYD_STACT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222421334|emb|CAL28148.1| aspartyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 588

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 21/187 (11%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+     +  R+ I  S+RE+   + F +I++  L   +P     ++           
Sbjct: 135 LRRQELAQTIKMRHQITRSVREFLDRDGFFDIETPVLTKSTPEGARDYLVPSRVHEGQFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    E
Sbjct: 195 ALPQ------SPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDVEMSFVDQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M+    +++   +       + Q            +T AEA +RY   D   T    +
Sbjct: 249 DVMEMGEALLKKVVKDVKGIDLTEQ---------FPRMTYAEAMSRY-GSDKPDTRFEME 298

Query: 191 QPDRHLL 197
             D   L
Sbjct: 299 LKDVSEL 305



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A + G+   +   +  +    L+E  E              P  E         
Sbjct: 410 ALRVKLAHELGLIDNNKLNFLWVTDWPLLEYDEDEKRYVAAHHPFTSPKDEDLDKLDSAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +    K +++     EL      + +   Q   FE     K++            L    
Sbjct: 470 EKAQAKAYDIVLNGYELGGGSIRIHNADIQSKMFEVLGFTKEQ----AQEQFGFLLDAFK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DR VML+ G NN+ + I  P
Sbjct: 526 YGAPPHGGIALGLDRFVMLLAGRNNLRDTIAFP 558


>gi|66820282|ref|XP_643772.1| asparagine-tRNA ligase [Dictyostelium discoideum AX4]
 gi|74857454|sp|Q554D9|SYNC_DICDI RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|60471958|gb|EAL69912.1| asparagine-tRNA ligase [Dictyostelium discoideum AX4]
          Length = 653

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/330 (16%), Positives = 106/330 (32%), Gaps = 35/330 (10%)

Query: 17  RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAFSTELIIQDHIRKP 75
           R    +  R++   + R++F EN ++E+   +L  +     + +  F+      D+  KP
Sbjct: 343 RASSIMKIRSLCLFAFRQHFFENHYMEVTPPTLVNTYCEGGSEL--FTV-----DYFGKP 395

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMK 134
            YL  S +   + +L       F    ++R  + +   H  EF  LE      +YE+L  
Sbjct: 396 AYLTQSSQLYLETMLP-VLGDNFTITQSYRAEKARTRRHLTEFLHLEAECPFITYEELQ- 453

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
              + I        +K+F          +    +                 ++  D  + 
Sbjct: 454 ---DRIEFLVVDVCEKLFKMDPELILSVNPDFKVPKRPFMR----------MNYSDAIEY 500

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYP 253
                  ++       D  + D        ++   +G      L R+PA   +      P
Sbjct: 501 CKKNGIQKKLEDGTEVDFEFGDDIPEAQERRMNDQIGE--PIFLCRFPAEMKAFYMARCP 558

Query: 254 ADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
            D   T+  +L    + E+      + D  E          +K  +  + Y    D    
Sbjct: 559 EDRTLTESLDLLMPGVGEIVGGSMRISDFNELVA-----AYKKAGLDTDEYYWFTD--QR 611

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
                Q  G  +G +R +  +    +I  V
Sbjct: 612 KYGTTQHGGYGLGVERFLTWMLKEEHIRNV 641


>gi|301614211|ref|XP_002936592.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           [Xenopus (Silurana) tropicalis]
          Length = 454

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/348 (12%), Positives = 87/348 (25%), Gaps = 61/348 (17%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL-- 66
           H R R       L  R+   ++++E+F  N +  I +  +  +       +  F  E   
Sbjct: 146 HLRCRTPTFSSLLRIRSEATAAIQEFFKTNGYTHIHTPIITSNDCEGAGEL--FKVEAAN 203

Query: 67  ------IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                         P +L  S +                                E    
Sbjct: 204 KSPAAGEESSFFGVPAFLTVSGQLHL-----------------------------EVMSG 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
             Y+  +S    +     ++    +     + +    + N FS+       E   +    
Sbjct: 235 FIYK-FKSLVIELPPQCMVMESLFKTTTATLLARCPDDINFFSKYVSPGQKEVLDKLLKN 293

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                                ++A     +   W         + +  + G      +  
Sbjct: 294 TFIVMSYTE-------AINILKKAKCPFQYKPEWGFYIQTEHEKYLVKHCGEVPV-FVIN 345

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           YP            D        +      L     EL     +  R +   Q   ++  
Sbjct: 346 YPLELKPFYARDNEDGPQQTAAAV----DLLVPGIGELFGGSLREERPQLLQQRLDRLGL 401

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +     + +L           G  MGF+R +  + G  NI +VI  P 
Sbjct: 402 KDTY--QWYLDLRQFGSVPHGGFGMGFERYLQCILGVENIKDVIPFPR 447


>gi|311279234|ref|YP_003941465.1| aspartyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308748429|gb|ADO48181.1| aspartyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 590

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 20/208 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +    ++R                      +   +T AEA  RY +   DL   ++  
Sbjct: 244 VREVMEAMVRQMWLEIKGVDLG----------DFPIMTFAEAERRYGSDKPDLRNPMELV 293

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D  D       A  AG         + +
Sbjct: 294 DVADLLKNVEFAVFAGPANDPKGRVAAL 321



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 14/149 (9%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  +  W+ ++        E    G+         P   +A       +      +
Sbjct: 415 KDLSLTAESKWAPLWVIDFPMFEEDGEGGLTAMHHPFTSPKDMTAAELKAAPEEAVANAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
           ++     E+      +     Q+  F      E ++++K            L  L    P
Sbjct: 475 DMVINGYEVGGGSVRIHRGDMQQTVFGILGINEQEQREKFG--------FLLDALKYGTP 526

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +G+A G DRL ML+TG +NI +VI  P
Sbjct: 527 PHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|156086936|ref|XP_001610875.1| asparaginyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154798128|gb|EDO07307.1| asparaginyl-tRNA synthetase, putative [Babesia bovis]
          Length = 557

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/374 (14%), Positives = 106/374 (28%), Gaps = 53/374 (14%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYF------------VENQFIEIDSMSLQYSPG 54
           +    R  +   +     R+ +   L                 +  FI + +  L     
Sbjct: 200 EHVNFRSRNAVMQAIFRIRSAVTEGLYHIMKVCHVTGSLYSLQKRSFINVTTPLLTTV-N 258

Query: 55  NETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLH 113
            E     F  +           +L  S +    + L +G  +++    A+R        H
Sbjct: 259 CEGMGDIFEIDRT---------FLSVSGQLEL-EALCSGFSRVWKLGPAFRADRSDTPRH 308

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF-----QNVNCNPFSEPEYI 168
             EF MLE        + L+     II  +A               ++   +     E +
Sbjct: 309 LCEFWMLEAEMVGPDLKDLINVIHQIIIGSARTILDNCRDDILLLERHFKTSIIKRLETL 368

Query: 169 -----TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-----WSDIF 218
                +  ++  R+   D       P     +   L      I            W D  
Sbjct: 369 VGTGSSGQDSLPRHLTDDPNYCEPQPIHTLEYKEALSILNRAIETDESYEHSKLEWGDQL 428

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDE 277
           S      +   +  +    + +YP   +        D       +++A  + E+      
Sbjct: 429 SAAHERSLLS-ILESPLVAVVQYPRAIAPFYMQQ-LDGGVVNNVDIFAEGVGEIAGGSIR 486

Query: 278 LLDPIEQRHRFEKE-MQEKK-KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTG 335
            ++  E     ++  +  K    Y E        L          G  +GF+R++M + G
Sbjct: 487 EVNYPELEKSMQEHGVYGKDYAGYLE--------LRKF-GNVPHGGFGIGFERMIMFLLG 537

Query: 336 ANNINEVIWTPFSQ 349
             NI +VI  P  +
Sbjct: 538 IQNIKDVIHFPKVR 551


>gi|156933556|ref|YP_001437472.1| aspartyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166225344|sp|A7MEB6|SYD_ENTS8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|156531810|gb|ABU76636.1| hypothetical protein ESA_01376 [Cronobacter sakazakii ATCC BAA-894]
          Length = 592

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +IR                      E   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLIRQLWLDVKGVDLG----------EFPVMTFAEAERRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    + A      +D    +
Sbjct: 293 VDVADLLKSVEFAVFAGPANDPKGRV 318



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 48/151 (31%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S     K  P   I+     D               P   +A       +     
Sbjct: 413 LGKDLSLTDEAKWAPLWVIDFPMFEDDGEGGLSAMHHPFTAPKDMTAEELKAAPEDAVAN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACLT-E 315
            +++     E+      +     Q+  F      E ++++K            L  L   
Sbjct: 473 AYDMVINGYEVGGGSVRIHRGEMQQTVFGILGINEHEQREKFG--------FLLDALKFG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|125570422|gb|EAZ11937.1| hypothetical protein OsJ_01810 [Oryza sativa Japonica Group]
          Length = 560

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 84/286 (29%), Gaps = 21/286 (7%)

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEW 122
           T     D  ++  +L  S +   +    A    ++ F   +R        H  EF M+E 
Sbjct: 287 TVAYENDFFKRQAFLTVSGQLQVETYACA-LSSVYTFGPTFRAENSHTSRHLAEFWMVEP 345

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A  + +  M      ++   +   +            + +        A  R   +  
Sbjct: 346 EIAFANLQDDMNCAERYVQYLCKWLLEHCREDMEFMVKNYDK-------TAIERLELVSS 398

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                        LL     +   +  +   W    +      +   +      I+  YP
Sbjct: 399 TPFQRISYTKAVELLKNVTDK---KFENKVEWGIDLASEHERYLTE-VIFKKPVIVYNYP 454

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
               A       D +     ++    +       EL+   ++  R +      +      
Sbjct: 455 KEIKAFYMRLNDDQKTVAAMDVLVPKV------GELVGGSQREERLDLLKTRIQDAGLPL 508

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            P  E +L        + SG  +GF+R+++  TG  NI +VI  P 
Sbjct: 509 EPY-EWYLDLRRFGSVKHSGFGLGFERMILFATGLENIRDVIPFPR 553


>gi|110751167|ref|XP_623874.2| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Apis mellifera]
          Length = 433

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/354 (11%), Positives = 89/354 (25%), Gaps = 51/354 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE--- 65
           H R R       L  R+M  +S+  Y     FI + +  L  +       +         
Sbjct: 103 HLRSRTRRFSSLLRLRDMTTASIENYLRSKNFINVHTPILTSNDCEGAGELFLVKPHCEN 162

Query: 66  ----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL-HQ 114
                        + +     +L  S +    + +A    K++ F  ++R        H 
Sbjct: 163 LLKSMKRENMSEEESYFNTKAFLTVSGQLHL-ETIARSLTKVYTFGPSFRAENSKSRLHL 221

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF MLE   A  +    +      I    +   + +F     + +              
Sbjct: 222 TEFYMLEAELAFINNIDDIMIE---IESLIKYVIKDVFEKGAADIHV------------- 265

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                 ++                   +     ++    +    S+     +        
Sbjct: 266 --IGGCEVAWLNKKFICITYDEAINILENNANSLSTPIKFGTNLSKEHELFLVKYNDNIP 323

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             I++     +         D       +L    +                    ++  E
Sbjct: 324 IFIINWPKESKPFYMKECKDDASKVAAIDLLVPTVGELVGGS-----------LREDNYE 372

Query: 295 KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           K K+          +L         + G  MGF+R +  +    NI + +  P 
Sbjct: 373 KLKLKLPPASDLSWYLELRKYGNVPTGGFGMGFERFLQHIFNIPNIKDTLPFPR 426


>gi|71065761|ref|YP_264488.1| aspartyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|97196821|sp|Q4FSF4|SYD_PSYA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71038746|gb|AAZ19054.1| aspartyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 608

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 76/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
              + +  ++ R    S++R Y  ++ F+++++  L   +P     ++    T       
Sbjct: 138 RRPQMQDRMVFRAKATSAIRRYLDDHGFLDVETPILTRATPEGARDYLVPSRTRPGNFFA 197

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  + E+
Sbjct: 198 LPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLNEEE 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I+             + +    F +   +T AEA   YA+ D          
Sbjct: 252 IMNINEGLIKHVF----------KTMMDVEFEKFPRMTYAEAMRDYAS-DKPDLRIPLKL 300

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 301 IDVADLMKDVDFKVFAGPANDPKGRV 326



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 51/155 (32%), Gaps = 10/155 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRF 258
           Q+ G+ +                  E     +       +P  +   S        +   
Sbjct: 425 QKIGLDLEMTTCEWAPLWVTDFPMFEET--EDGRWTSMHHPFTKPKGSVEELKTNPESAL 482

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           +  +++     E+      +     Q   FE    +      E        L  L    P
Sbjct: 483 SIAYDMVLNGTEVGGGSLRINTLEMQTAVFEALGID----DQEAEDKFGFLLDALKFGAP 538

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              G+A G DRL+ML+ GA++I +VI  P +++ +
Sbjct: 539 PHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTAE 573


>gi|114321812|ref|YP_743495.1| aspartyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122310755|sp|Q0A582|SYD_ALHEH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114228206|gb|ABI58005.1| aspartyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 592

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 68/197 (34%), Gaps = 27/197 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           D   R R            L  R  I S+LR +  E+ F++I++  L   +P     ++ 
Sbjct: 121 DVRLRYRYVDLRRPEMLQRLRARARITSNLRRFLDEHGFLDIETPMLTRATPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +     +R+ +     QPEFT L
Sbjct: 181 PSRTHPGSFFALPQ------SPQLFKQLLMMAGMDRYYQIVRCFRDEDLRADRQPEFTQL 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    E +M     ++R       Q                  +  AEA AR+ + 
Sbjct: 235 DIETSFMDEEGIMHLTERMMRRLFADVLQVDLP---------DPFPRMGYAEAMARFGSD 285

Query: 181 DLGTTLDNPDQPDRHLL 197
                +         L+
Sbjct: 286 KPDLRIPLELVEVADLM 302



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 54/149 (36%), Gaps = 14/149 (9%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-APESALANIYPADPRFTKRFELYA 266
           V  +     +    + E  E +  +         P   + A       +   ++ +++  
Sbjct: 423 VEDEWRPLWVVDFPMFEYDEKDGRLYALHHPFTAPNVDDPAELADKDPEQLVSRAYDMVL 482

Query: 267 CNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
              EL      +     Q+  F      E + + K            L  L    P   G
Sbjct: 483 NGTELGGGSVRIHRQDMQQAVFRLLGIDEDEARAKFG--------FLLDALEYGAPPHGG 534

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           IA G DRLVML+TGA++I EV+  P +Q+
Sbjct: 535 IAFGLDRLVMLMTGASSIREVMAFPKTQT 563


>gi|238788524|ref|ZP_04632317.1| Aspartyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238723437|gb|EEQ15084.1| Aspartyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 597

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGVSLGDFPVMTFAEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDAKGRV 318



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLTAMHHPFTAPKDMSPEQLAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQQVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 GILGINEHEQREKFG--------FLLDALKYGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|226507460|ref|NP_001147875.1| LOC100281485 [Zea mays]
 gi|195614288|gb|ACG28974.1| asparaginyl-tRNA synthetase, cytoplasmic 3 [Zea mays]
          Length = 565

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 81/286 (28%), Gaps = 23/286 (8%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRA 125
              D  ++  +L  S +   +    A    ++ F   +R        H  EF M+E   A
Sbjct: 291 FENDFFKRQAFLTVSGQLQVETYACA-LSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 349

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             + +  M      ++   +                + +        A  R   +     
Sbjct: 350 FANLQDDMNCAEKYVQYLCKWLLDHCQEDMEFMVKNYDKS-------AIERLELVSSTPF 402

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +         LL     +   +  +   W    +      +  ++      I+  YP   
Sbjct: 403 VRISYTKAVELLKNVTDK---KFDNKVEWGIDLASEHERYLTEDIFKKPV-IVYNYPKGI 458

Query: 246 SALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            A        D        L     EL             + R          +  E Y 
Sbjct: 459 KAFYMRLNDDDKTVAAMDVLVPKVGELIGGSQREERLDVLKQRILD-----AGLPLEPY- 512

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             E +L        + SG  +GF+R+++  TG  NI +VI  P S+
Sbjct: 513 --EWYLDLRRFGSVKHSGFGLGFERMILFATGMENIRDVIPFPSSK 556


>gi|239995982|ref|ZP_04716506.1| aspartyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 586

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 71/213 (33%), Gaps = 27/213 (12%)

Query: 15  HYR----RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
            YR    RRP     L  R  +  ++R +  E  F++I++  L   +P     ++    T
Sbjct: 123 RYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEEEGFLDIETPILTKATPEGARDYLVPSRT 182

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   
Sbjct: 183 HKGEFFALPQ------SPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQPEFTQIDIET 236

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
                + +M     +IR               +      +   +T  EA  R+   D   
Sbjct: 237 TFLDADGVMSITERMIRDLF----------NKMLNVDLGDFPRMTYKEAMTRF-GSDKPD 285

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +  +  D   L             +D    +
Sbjct: 286 LRNPLELTDVADLLANVDFKVFSGPANDPKGRV 318



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 47/146 (32%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKR 261
           + G      +        +     E   G ++        P   +            +  
Sbjct: 412 KLGEDFELLEGEWKPLWVVDFPMFEEFDGQLHAIHHPFTAPRGLTPEELKANPAEALSDA 471

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           +++    +EL      + +   Q   F     +      E        L  L    P  +
Sbjct: 472 YDMVLNGVELGGGSVRIHNEDMQSTVFNILGID----DEEAKNKFGFLLDALRFGAPPHA 527

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DRLVML+TGA +I +V+  P
Sbjct: 528 GLAFGLDRLVMLMTGATSIRDVMAFP 553


>gi|313105850|ref|ZP_07792113.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|310878615|gb|EFQ37209.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 591

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 29/217 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R            L  R  I SS+R Y  +N F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T      +      L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRT------YPGHFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +      ++     ++R   +                F E  ++   EA  RY   
Sbjct: 236 DIETSFLDESDIIGITEKMVRQLFKEVLD----------VEFDEFPHMPFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D        +  D      + +        +D    +
Sbjct: 285 DKPDLRIPLELVDVADQLKEVEFKVFSGPANDPKGRV 321



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TE 315
           ++ +++     EL      + D   Q+  F      +    +E    ++    L  L   
Sbjct: 472 SRAYDMVLNGTELGGGSIRIHDKSMQQAVF------RVLGIDEAEQEEKFGFLLDALKYG 525

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G+A G DRLVML+TGA++I EVI  P +QS  +
Sbjct: 526 APPHGGLAFGLDRLVMLMTGASSIREVIAFPKTQSAGD 563


>gi|58337236|ref|YP_193821.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227903820|ref|ZP_04021625.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|81311475|sp|Q5FKI4|SYD_LACAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|58254553|gb|AAV42790.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227868707|gb|EEJ76128.1| aspartyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 614

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 8/196 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I  +  E+F EN FI+I++  L + SP     ++            
Sbjct: 133 RRPEVQKAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMEMSFADEQT 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +              +           +   RY  +    +    D 
Sbjct: 247 IQDYTEGLLKKIMKDVMGIDLKTPIKRMSWTDSMNKYGCDKPDTRYGMLIHDLSSIFKDS 306

Query: 192 PDRHLLYLQAQQAGIR 207
             +      A    ++
Sbjct: 307 DFKVFSGAIADGGFVK 322



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ GI       +  +    L E  E              P  E         
Sbjct: 407 HLRREFAKETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTDP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+     KK+ Y E +      +    
Sbjct: 467 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEDMFKALGFTKKRAY-EQFGY---LMDAFD 522

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++ G +NI +V+  P
Sbjct: 523 MGFPPHAGLAIGLDRFAMMLAGKDNIRDVLAFP 555


>gi|255934216|ref|XP_002558389.1| Pc12g15910 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583008|emb|CAP81218.1| Pc12g15910 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 534

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 110/398 (27%), Gaps = 64/398 (16%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS 52
           + QIP         H R R          R+     L   F  +    F ++    +  S
Sbjct: 143 LRQIP---------HLRIRTPFNSLLSRFRSECMFQLGNVFHSHPDGAFTQVQPPLITSS 193

Query: 53  ---PGNETH-------IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
                 ET             T        R P YL  S +   +   AA    ++    
Sbjct: 194 DCEGAGETFTLTPRGAATP--TTENEH-FFRAPKYLTVSSQLHLEAY-AAELGNVWTLTP 249

Query: 103 AWRNGEQG-CLHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
            +R  +     H  EF MLE         + L     +++R             + ++  
Sbjct: 250 VFRAEKSDTPRHLSEFYMLEAEVNFMSDLDSLTDLVEHLLRDLTRRLYNTPVGQEILSAK 309

Query: 161 PFSEPEYITVAEA---FARYANI-DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
              EP      E+     R+ ++ D              +L     + G    H  TW+ 
Sbjct: 310 RSGEPGQEASEESGSLRKRWTDLMDGPKWHRITYTQAVEMLQRAVTEDGASFEHSPTWNG 369

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALAN-IYPADPRFTKRFELYACNIELCNAC 275
                  + I   L   C   +  YP                     E  AC   L    
Sbjct: 370 GLQLEHEKYIVEVLHQGCPVFVTDYPKSVKPFYMAPSQTADGSNTPGETVACFDLLLPEV 429

Query: 276 DELLDPIEQRHRFEKEMQ-EKKKIYNETYPI------------------DEDF-----LA 311
            E+     + HR    +Q  ++    +   I                  DED       A
Sbjct: 430 SEVAGGSLREHRLLNLIQNMREHGLIKPRQIPESGDPASGESLYPHLTPDEDLSHLQWYA 489

Query: 312 CLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            L         G  +GFDR +  +TG +++ +++  P 
Sbjct: 490 DLRRWGSAPHGGFGLGFDRFLGYLTGVSSVRDIVSFPR 527


>gi|56460197|ref|YP_155478.1| aspartyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|62287527|sp|Q5QYV2|SYD_IDILO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56179207|gb|AAV81929.1| Aspartyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 589

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 76/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R  + S++R +F +N F++I++  L   +P     ++ 
Sbjct: 119 EARLRYRYLDLRRPQMNEKLQFRAKVTSAVRRFFDDNGFLDIETPMLTRATPEGARDYLV 178

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ +G ++ +     +R+ +     QPEFT +
Sbjct: 179 PSRTHKGRFFALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQI 232

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S EQ+M+    + R   +                  E   +T  EA  R+   
Sbjct: 233 DIETSFMSAEQVMEITEQMARDLFKQLLDVDLG----------EFPSMTWHEAMRRF-GS 281

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D   +    +        +D    +
Sbjct: 282 DKPDLRNPLELVDVADVLKDVEFKVFSGPANDEEGRV 318



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
               +  ++          + ++  +  +         P   +            +  ++
Sbjct: 416 KDFELVSNEWKPLWVVDFPMFEVADDGSLAALHHPFTAPVNVTPEELKANPAAAISNAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
           +    +EL      + +   Q+  FE    EK    +E        L  L    P  +G+
Sbjct: 476 MVLNGVELGGGSVRIHENAMQQAVFEVLGIEK----DEAQEKFGFLLEALKYGTPPHAGL 531

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DRLVML+ GA++I +VI  P
Sbjct: 532 AFGLDRLVMLMVGASSIRDVIAFP 555


>gi|293395804|ref|ZP_06640086.1| aspartate-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291421741|gb|EFE94988.1| aspartate-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 594

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKARAKITSFVRRFMDQHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R   +                  +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEQLVRELWQEVKGVDLG----------DFPIMTFAEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDAKGRV 318



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   +  A            +++     E+      +     Q+  F
Sbjct: 441 EGGLAAMHHPFTAPRDMAPEALANDPTSAIANAYDMVVNGYEVGGGSVRIHRSEMQQTVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 GILGINEHEQREKFG--------FLLDALKYGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|152984996|ref|YP_001349894.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|150960154|gb|ABR82179.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 590

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 29/217 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R            L  R  I SS+R Y  +N F+++++  L   +P     ++ 
Sbjct: 121 ETRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T      +      L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 181 PSRT------YPGHFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +      ++     ++R   +                F E  ++   EA  RY   
Sbjct: 235 DIETSFLDESDIIAITEKMVRQLFKEVLG----------VEFDEFPHMPFEEAMRRY-GS 283

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D        +  D      + +        +D    +
Sbjct: 284 DKPDLRIPLELVDVADQLQEVEFKVFSGPANDPKGRV 320



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TE 315
           ++ +++     EL      + D   Q+  F      +    +E    ++    L  L   
Sbjct: 471 SRAYDMVLNGTELGGGSIRIHDKAMQQAVF------RVLGIDEAEQEEKFGFLLDALKYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G+A G DRLVML+TGA++I EVI  P +QS  +
Sbjct: 525 APPHGGLAFGLDRLVMLMTGASSIREVIAFPKTQSAGD 562


>gi|83647606|ref|YP_436041.1| aspartyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|97196688|sp|Q2SCK8|SYD_HAHCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83635649|gb|ABC31616.1| aspartyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 590

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 28/183 (15%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           D   R R            L  R+ + S +R +   N F+++++  L   +P     ++ 
Sbjct: 121 DVRLRYRYMDLRRPEMLNKLRFRSKVTSYIRNFLDGNGFMDVETPILTRATPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT +
Sbjct: 181 PSRTHEGSFFALPQ------SPQLFKQLLMMSGVDRYYQIAKCFRDEDLRADRQPEFTQV 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  +  ++M     ++R       +              E   +  +EA  RY + 
Sbjct: 235 DIETSFLNENEIMSITERLVRDMFRDLLE----------VELPEFPRMPFSEAMNRYGSD 284

Query: 181 DLG 183
              
Sbjct: 285 KPD 287



 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 10/151 (6%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD--RYP---APESALANIYPADPRFTK 260
           +++ HD    +     L     P    +         +P      +        +   ++
Sbjct: 413 VKLGHDLNLLEKQWAPLWVVDFPMFEEDGEGGWTAIHHPFTAPSCAVEMLESDPENALSR 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
            +++     EL      + D   Q    E  ++      +E        L  L    P  
Sbjct: 473 AYDMVLNGTELGGGSVRIHDSDMQ----ETVLRILGIGQDEAREKFGFLLDALKFGCPPH 528

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            G+A G DRLVML+TGA +I EVI  P +QS
Sbjct: 529 GGLAFGLDRLVMLMTGAQSIREVIAFPKTQS 559


>gi|254385093|ref|ZP_05000426.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194343971|gb|EDX24937.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 413

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 102/341 (29%), Gaps = 46/341 (13%)

Query: 3   QIPSQPWWNRDFHY-------RRRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQY 51
            +P       +          R+R         +  ++  LREY ++N   E+ +  L  
Sbjct: 105 PLPIDENTGPEHRLDWRFLDVRKRASAQMVFAAQTTLEQGLREYAMQNGCTEMHTPKLMG 164

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
           +  +E+    F        +  +  YL  SP+F  +  +AAG +++F     +R      
Sbjct: 165 TA-SESGAEVFK-----LGYFDRSAYLAQSPQFYKQMAVAAGIDRVFEIGPVFRAEPSYT 218

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
             H  EFT ++   +     + +      +   A     ++                   
Sbjct: 219 SRHATEFTGVDVELSWIDDVEDVMAFEERMLAHAIAKVAEV------------------H 260

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            EA      I++        +          +  G          D      I      L
Sbjct: 261 GEAIREVFGIEVVAPEAPFPRITMAEAQEILRAGGWDPEGVKEDLDPEGERTIAAHMKEL 320

Query: 231 GINCCTILDRYPAPESALANIYPAD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
             +    +  YPA      ++ PAD P  T  F+L    +E+                  
Sbjct: 321 TGHEFVFITHYPASIRPFYHMRPADRPDLTLSFDLLWKGLEITTGAQREHRSDVLLK--- 377

Query: 290 KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRL 329
            +++EK  +  E      D++       P   G+  G  R+
Sbjct: 378 -QVEEK-SMDTEPMQ---DYMNIFRFGCPPHGGLGAGLGRI 413


>gi|15596160|ref|NP_249654.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|107100420|ref|ZP_01364338.1| hypothetical protein PaerPA_01001445 [Pseudomonas aeruginosa PACS2]
 gi|116048888|ref|YP_792311.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893066|ref|YP_002441935.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254245246|ref|ZP_04938568.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|12230941|sp|Q51422|SYD_PSEAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|122257995|sp|Q02IC5|SYD_PSEAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736543|sp|B7UXW9|SYD_PSEA8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|9946870|gb|AAG04352.1|AE004530_5 aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|115584109|gb|ABJ10124.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126198624|gb|EAZ62687.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218773294|emb|CAW29106.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 591

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 29/217 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R            L  R  I SS+R Y  +N F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T      +      L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRT------YPGHFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +      ++     ++R   +                F E  ++   EA  RY   
Sbjct: 236 DIETSFLDESDIIGITEKMVRQLFKEVLD----------VEFDEFPHMPFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D        +  D      + +        +D    +
Sbjct: 285 DKPDLRIPLELVDVADQLKEVEFKVFSGPANDPKGRV 321



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TE 315
           ++ +++     EL      + D   Q+  F      +    +E    ++    L  L   
Sbjct: 472 SRAYDMVLNGTELGGGSIRIHDKSMQQAVF------RVLGIDEAEQEEKFGFLLDALKYG 525

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G+A G DRLVML+TGA++I EVI  P +QS  +
Sbjct: 526 APPHGGLAFGLDRLVMLMTGASSIREVIAFPKTQSAGD 563


>gi|227893459|ref|ZP_04011264.1| aspartate--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227864738|gb|EEJ72159.1| aspartate--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 617

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 64/190 (33%), Gaps = 8/190 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I  +  E+F EN FI+I++  L + SP     ++            
Sbjct: 136 RRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMEMSFADEET 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY  +    +    D 
Sbjct: 250 IQGYTEGLLKKIMKDVKGIDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDLSPIFKDS 309

Query: 192 PDRHLLYLQA 201
             +      A
Sbjct: 310 DFKVFSGAIA 319



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A + GI       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAHETGIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q + F+     KK+ Y E +      +  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAY-EQFGY---LMDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V+  P
Sbjct: 526 MGFPPHAGLAIGLDRFAMMLADKDNIRDVLAFP 558


>gi|254457823|ref|ZP_05071250.1| aspartyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085216|gb|EDZ62501.1| aspartyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 585

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 69/207 (33%), Gaps = 22/207 (10%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   + R               R+    + R    EN F+E+++  L   +P     ++ 
Sbjct: 121 ETRLKYRYLELRDPAVYETFRLRSKAAIAARNILDENGFLEVETPILTKSTPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT +
Sbjct: 181 PSRVHNGEFYALPQ------SPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQPEFTQI 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +   +    E ++     ++    +  N      F  +  N   E       +       
Sbjct: 235 DVEMSFCDQEDVIVVAEKLLTAMFKACNINVQAPFNRITYNNAMEWYGSDKPDLRYDLKM 294

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGI 206
           +D    +D  ++ D  +    A++  I
Sbjct: 295 VD---VIDIFERCDNEIFTNIAKKPHI 318



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 5/132 (3%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
           D F  + +         +       +P  +    +    +   +  +++     EL    
Sbjct: 424 DAFEFVWVVDFPMFEVEDGRVKALHHPFTQPKDTDKDDVEEIESIAYDIVLNGTELGGGS 483

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
             +     Q   F+    E      E        L  L    P   G A+GFDR++ML+T
Sbjct: 484 IRIHKEAVQNEVFKLLGIE----EEEAQEKFGFLLDALKFGAPPHGGFALGFDRMMMLIT 539

Query: 335 GANNINEVIWTP 346
             ++I +VI  P
Sbjct: 540 KKSSIRDVIAFP 551


>gi|295692849|ref|YP_003601459.1| aspartyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030955|emb|CBL50434.1| Aspartyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 617

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 66/196 (33%), Gaps = 8/196 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I  +  E+F EN FI+I++  L + SP     ++            
Sbjct: 136 RRPEVQQAIILRSKILRATHEFFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMEMSFADEET 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY  +    +    D 
Sbjct: 250 IQSYTEGLLKKIMKDVKGFDLKTPIKRITWTDSMNKYGCDKPDTRYGMLIHDLSPIFKDS 309

Query: 192 PDRHLLYLQAQQAGIR 207
             +      A    ++
Sbjct: 310 DFKVFSGAIADGGFVK 325



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ GI       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAKETGIVPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q + F+     KK+ Y E +      +  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQENMFKALGFTKKRAY-EQFGY---LMDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V   P
Sbjct: 526 MGFPPHAGLAIGLDRFAMMLADKDNIRDVSAFP 558


>gi|240949964|ref|ZP_04754280.1| aspartyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295564|gb|EER46290.1| aspartyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 588

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 68/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 131 RRPEMAEKLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I             + +       +   +T  EA  R+   D     +  + 
Sbjct: 245 VRAVMEEMIHGL----------WLDRLNVDLGKFPMMTWQEAMDRF-GSDKPDLRNPLEL 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        +     +
Sbjct: 294 VDVADILKDVEFKVFNEPANSPDGRV 319



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 40/119 (33%), Gaps = 17/119 (14%)

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------ 288
                  P   S               +++     E+      + DP  Q+  F      
Sbjct: 448 MHHPFTSPKGLSPEELAADPVKAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFNILGIN 507

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E+E  EK              L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 508 EEEQAEKFG----------FLLDALKFGTPPHAGLAFGLDRLTMLITGTENIRDVIAFP 556


>gi|220935408|ref|YP_002514307.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254781760|sp|B8GUK0|SYD_THISH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219996718|gb|ACL73320.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 592

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 69/201 (34%), Gaps = 27/201 (13%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   R R            L  R  +  +LR +  +N F++I++  L   +P     +
Sbjct: 118 NEETRLRYRYVDLRRPAMQKRLQMRARVSRTLRRFLEDNGFLDIETPMLTKATPEGARDY 177

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           I    T       + +      SP+   + L+  G ++ +     +R+ +     QPEFT
Sbjct: 178 IVPSRTHPGSFFALPQ------SPQLFKQLLMMGGMDRYYQIVRCFRDEDLRADRQPEFT 231

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   +    E +M     ++R                     +  + ++ AEA ARY 
Sbjct: 232 QLDIETSFMDEEGIMGLMEEMVRELFAQVL---------EVPLHTPFQRMSYAEAMARYG 282

Query: 179 NIDLGTTLDNPDQPDRHLLYL 199
           +      +         ++  
Sbjct: 283 SDKPDLRIPLELTELTDIMGE 303



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 48/148 (32%), Gaps = 13/148 (8%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           V        +    + E  E              P  E             ++ +++   
Sbjct: 422 VERGWRPLWVVDFPMFEHDEKEGRWVALHHPFTAPRVERPEELTGNPGEMISRAYDMVLN 481

Query: 268 NIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
             E+      +     Q+  F      E + + K            L  L    P   GI
Sbjct: 482 GTEVGGGSVRIHTTAMQQAVFNLLGIGEAEARDKFG--------FLLDALKYGCPPHGGI 533

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQS 350
           A G DRLVML+TG+ +I +V+  P +Q+
Sbjct: 534 AFGLDRLVMLMTGSQSIRDVMAFPKTQT 561


>gi|257465380|ref|ZP_05629751.1| aspartyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257451040|gb|EEV25083.1| aspartyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 587

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 68/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 130 RRPEMAEKLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAEE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I             + +       +   +T  EA  R+   D     +  + 
Sbjct: 244 VRAVMEEMIHGL----------WLDRLNVDLGKFPMMTWQEAMDRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        +     +
Sbjct: 293 VDVADILKNVEFKVFNEPANSPDGRV 318



 Score = 92.4 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 40/119 (33%), Gaps = 17/119 (14%)

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------ 288
                  P   S               +++     E+      + DP  Q+  F      
Sbjct: 447 MHHPFTSPKGLSPEELAADPVKAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFNILGIN 506

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E+E  EK              L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 507 EEEQAEKFG----------FLLDALKFGTPPHAGLAFGLDRLTMLITGTENIRDVIAFP 555


>gi|332024809|gb|EGI64997.1| Putative asparaginyl-tRNA synthetase, mitochondrial [Acromyrmex
           echinatior]
          Length = 470

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/355 (13%), Positives = 106/355 (29%), Gaps = 53/355 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI------- 59
           H R R       L  R++  + + ++  +  F+ + +  L  +      E  +       
Sbjct: 140 HLRPRTRGFSSLLRLRDLATTMITDHLRDRGFLSVHTPMLTSNDCEGAGEVFLVKPQSKE 199

Query: 60  --RAFSTELIIQD--HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL-HQ 114
             ++   E   ++  +     +L  S +    + +A    K++ F   +R        H 
Sbjct: 200 ILKSMKKEGQSENEIYFDTIAFLAVSGQLHL-EAVARALTKVYTFGPTFRAENSKSRLHL 258

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF MLE   A  +  + + + +       +   +++      + +  + PE   + + F
Sbjct: 259 SEFYMLEVEIAFITRIEELMEEV---ELLVKRVIERMIEKGASDLHSINAPELQWLNKTF 315

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R    D                +        R+     + +  S+     +        
Sbjct: 316 VRLTYED---------------AFNVLNNHANRLQQPIKYGEALSKEHELFLV-QHNDGV 359

Query: 235 CTILDRYPAPESALANIYPADP--RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
              +  +P            D   +      L     EL        D  +       E+
Sbjct: 360 PVFVINWPKVIKPFYMKECVDDVSKVAALDLLVPDVGELVGGSMREDDYGKL------EL 413

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +        ++ +D   L        + G  +GFDR +  V G  NI + +  P 
Sbjct: 414 KLPPTGNL-SWYLD---LRK-YGNVPTGGFGLGFDRFLQCVLGIGNIKDTVPFPR 463


>gi|196013129|ref|XP_002116426.1| hypothetical protein TRIADDRAFT_38262 [Trichoplax adhaerens]
 gi|190581017|gb|EDV21096.1| hypothetical protein TRIADDRAFT_38262 [Trichoplax adhaerens]
          Length = 549

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 111/333 (33%), Gaps = 42/333 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            +  R++ + +  ++F +  + ++   +L      G  T        L   D+  +  +L
Sbjct: 246 IMKIRSITEKAFNDHFYDRGYFKLTPPTLVQTQVEGGAT--------LFKLDYFGEQAFL 297

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   + +L +    ++C A ++R  +     H  E+T +E      ++E ++    
Sbjct: 298 TQSSQLYLETVLPSM-GDVYCIAQSYRAEQSRTRRHLAEYTHIEAECPFVTFEDMLDKIE 356

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++   AE   Q       +                     N D         + D    
Sbjct: 357 DLVVDVAERIMQSPLREMLLEM-------------------NPDFKVPQKPFRRMDYGEA 397

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
            +  ++  I       +          + +    IN   +L R+PA   S      P + 
Sbjct: 398 IVYLKEHNITKDDGTFYEYGEDIPEAPERKMTDQINEPIMLCRFPAEIKSFYMPRCPENR 457

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ-EKKKIYNETYPIDEDFLACL-T 314
           R T+  +L   N+       E++    + H  E  M+  K+   + T      +L     
Sbjct: 458 RVTQSVDLLMPNV------GEIVGGSMRTHVLEDLMEGYKRSGIDPTPYY--WYLDQRKY 509

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 G  +G +R +  +    +I +V + P 
Sbjct: 510 GTCPHGGYGLGMERYLTWLLNRPHIRDVTFYPR 542


>gi|32475271|ref|NP_868265.1| aspartyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|46577189|sp|Q7UFY6|SYD_RHOBA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|32445812|emb|CAD78543.1| Aspartyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 592

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 71/182 (39%), Gaps = 22/182 (12%)

Query: 4   IPSQPWWNRDFHY--RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET 57
           +P +    +      RR+     L++R+ I   +R+YF E+ FI++++  L   +P    
Sbjct: 120 LPGEDLRLKYRFLDLRRKEMQQALIRRSEIIKCMRDYFAEHDFIDVETPILGRSTPEGAR 179

Query: 58  -HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            ++            + +      SP+   + L+ AG ++    A  +R+ +     QPE
Sbjct: 180 DYLVPSRVHPSNFYALPQ------SPQLYKQILMVAGFDRYVQVAKCFRDEDLRADRQPE 233

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT L+   +    E ++     ++   A+    K  +              +T  EA  R
Sbjct: 234 FTQLDLEMSFVDSEDIIGLIDGLVAKTAKQVLGKDIT---------LPLPRMTYEEAMRR 284

Query: 177 YA 178
           + 
Sbjct: 285 FG 286



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 50/161 (31%), Gaps = 9/161 (5%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A +  +    +   S +    + EK E              P  E         +
Sbjct: 412 LRKRLAVELKLYEDGELNCSWVTEFPMFEKDEEAGRYVAMHHPFTAPLEEDLPLLKESPE 471

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL 313
               + ++L     E       + D   Q   FE          +E    D     L  L
Sbjct: 472 KCRAQAYDLVINGSEAGGGTIRIHDSKVQSQVFE------LLGMDEETARDRFGFLLDAL 525

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   GIA+G DR VML  G  NI EVI  P +Q   +
Sbjct: 526 RFGAPPHGGIALGVDRWVMLFAGLENIREVIAFPKTQKAAD 566


>gi|303230759|ref|ZP_07317506.1| aspartate--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514519|gb|EFL56514.1| aspartate--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 600

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +  ++R++F    F+EI++  L   +P     ++            
Sbjct: 140 RRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYLVPSRVNAGTFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F     +R+ +     QPEFT L+   +    E 
Sbjct: 200 LPQ------SPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQPEFTQLDLEMSFVDEED 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +    K                 IT  EA  +Y +       D    
Sbjct: 254 IYALLEQMVAEVFKKTLGKEIP---------LPMPRITWDEAMDKYGSDKPDLRFDMAFT 304

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
               L+     +    V  +
Sbjct: 305 DVTELVKDTEFKVFRSVIDN 324



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 50/164 (30%), Gaps = 13/164 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       ++ +    + E  E              P  E         
Sbjct: 414 ELRLEMARRMNMIDEDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHEDLDKLQSDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  +++    +E+      +     Q   F+     E + K K            L
Sbjct: 474 GSVKAIAYDMVLNGVEIGGGSLRIYQSDVQEKVFKAIGLSEEEAKSKFG--------FML 525

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  P  +G A G DRLVML+    +I +VI  P +QS  +
Sbjct: 526 DAFKYGAPPHAGCAFGLDRLVMLMAKRQSIRDVIAFPKTQSASD 569


>gi|149177716|ref|ZP_01856316.1| Aspartyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148843366|gb|EDL57729.1| Aspartyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 587

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 54/156 (34%), Gaps = 11/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +    D     + +  L+   E     +        P  E              + 
Sbjct: 414 KELELYGPDDFECCWVVNFPLLSYNEEEKRWDAEHHPFCQPVEEDVQYFESDPAKVRAQS 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     EL +    + D   Q+  F         +       +E F   L  L    P
Sbjct: 474 YDLVMNGYELASGSVRVHDQKVQQTIF-------DLLGISAEEAEERFGFLLQALRYGAP 526

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             +G A+G DRLVML+ G +NI +VI  P +Q   +
Sbjct: 527 PHAGAALGLDRLVMLLCGNDNIRDVIAFPKTQKAAD 562



 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 76/236 (32%), Gaps = 18/236 (7%)

Query: 4   IPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET 57
           +P++           R       L  R+ +    R+YF E+QF+EI++  L   +P    
Sbjct: 118 LPNEELRLTYRFLDLRSERLQEALKVRHRLTKLTRDYFDEHQFLEIETPILGRSTPEGAR 177

Query: 58  -HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            ++            + +      SP+   + L+  G ++    A  +R+ +     QPE
Sbjct: 178 DYLVPSRVHEGSFYALPQ------SPQIYKQILMIGGYDRYMQIARCFRDEDLRADRQPE 231

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT ++   A    E ++     +I    +       +      +     E     +   R
Sbjct: 232 FTQIDLEMAFVEQEDILTLIDGLIARILKELRSIEITEPLPRYDYHDVMEKYGSDKPDLR 291

Query: 177 YA--NIDLGTTLDNPDQPDRHLLYL---QAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +    ID+G    + D            + +    + A D         +     E
Sbjct: 292 FGLELIDVGEIAASCDFAVFKKTMETGGRVRGLNAKAAADRYSRKDIDGLTEFVGE 347


>gi|310643535|ref|YP_003948293.1| aspartyl-tRNA synthetase [Paenibacillus polymyxa SC2]
 gi|309248485|gb|ADO58052.1| Aspartyl-tRNA synthetase [Paenibacillus polymyxa SC2]
          Length = 592

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 67/230 (29%), Gaps = 17/230 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R+      R++     FIE+++  L   SP     ++            
Sbjct: 134 RRPEMHQTLKLRSKAAKVFRDFLDGEDFIEVETPILTKSSPEGARDYLVPSRVHEGEFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 194 LPQ------SPQLYKQLLMVGGLERYYQVARCFRDEDLRADRQPEFTQIDIETSFMQQDD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L+     ++    +                 +  + IT AEA  +Y +            
Sbjct: 248 LLPMMERLMVKLFKETVGVELE---------TPFQRITHAEAMDKYGSDKPDLRFGLELV 298

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               ++     +    V        + +             +      RY
Sbjct: 299 NVNDIVATSGVKVFASVIEKGGEVKVLNAKGCGTWSRKDIDDLGPFAARY 348



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 49/163 (30%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+       ++ +    L+   E              P  E         
Sbjct: 407 ALRLKIGRHLGLIDDKKFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKEEDLALLDTDP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                + +++     E+      +     Q   F       K +      + + F   L 
Sbjct: 467 GQVRAQAYDIVLNGYEVGGGSMRIFKREIQEKMF-------KALNLPPEEVKDKFGYLLD 519

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA GFDRLVML+ G  N+ E I  P + S  +
Sbjct: 520 AFEYGTPPHGGIAFGFDRLVMLLAGRTNLRETIAFPKTASATD 562


>gi|227524427|ref|ZP_03954476.1| aspartyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088386|gb|EEI23698.1| aspartyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 595

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +L RN I  S+  +F    FI+I++ +L   +P     ++            
Sbjct: 134 RRPEMQYNILLRNRIIQSIHSFFDGEGFIDIETPTLTKSTPEGARDYLVPSRVYPGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E+
Sbjct: 194 LPQ------SPQQFKQMLMGAGFDKYYQIARCYRDEDLRGDRQPEFTQIDMEMSFADQEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M      I    + A  K               + +   E+ AR+   D        + 
Sbjct: 248 IMDVTEGFIAKVMKDAMGKDVK---------LPFKRMDWDESMARF-GTDQPDVRFGMEL 297

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 298 KDLSDIMK 305



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 51/155 (32%), Gaps = 8/155 (5%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           L    A++  +       +  I +  +    ++    +            +         
Sbjct: 410 LRVEIAKEQNMIDESKFAFLWIVNWPLFHWDVDLKRYVAAHHPFTMPNEEDVHYLLNDNE 469

Query: 255 DPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           DP   + + +++    +EL      +     Q   F+     K+    E+      FL  
Sbjct: 470 DPHKAYAQSYDIILNGLELGGGSIRIHTRKLQERMFKALGFTKESA--ESQF--GYFLTA 525

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   G+A+G DR V L+    NI +VI  P
Sbjct: 526 LDYGFPPHGGLAIGLDRFVRLLADRENIRDVIAFP 560


>gi|152993093|ref|YP_001358814.1| aspartyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166225437|sp|A6QAE8|SYD_SULNB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|151424954|dbj|BAF72457.1| aspartyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 584

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 70/212 (33%), Gaps = 9/212 (4%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLY 77
                R+    + R    E  F+E+++  L   +P     ++            + +   
Sbjct: 138 DTFKLRSKATIATRNALDELGFLEVETPILTKSTPEGARDYLVPSRVHGGEFYALPQ--- 194

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   +    E ++    
Sbjct: 195 ---SPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQPEFTQIDVEMSFCDQEDVITVAE 251

Query: 138 NIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
            +I              F  +  +   E       +     A +D+    +  D      
Sbjct: 252 KLISDVFIKCGFDVPTKFNRMTHSEAMEKYGSDKPDMRYDLAMVDVIDIFERCDNEIFSG 311

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +    ++  I+        +IFS+  ++  E 
Sbjct: 312 IAKMPKKNRIKALRVPKGDEIFSKRQMKGFED 343



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 5/143 (3%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           D    D F  + +         +       +P  +    +    +   +  +++     E
Sbjct: 417 DIIPEDTFEFLWVMDFPMFEVEDGKVKALHHPFTQPKSLDFNDIEEIESIAYDVVLNGTE 476

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRL 329
           L      +     Q   F    +       E        L  L    P   G A+G DR+
Sbjct: 477 LGGGSIRIHKEDVQEEVF----KLLGISEEEAQSKFGFLLDALKFGAPPHGGFALGLDRM 532

Query: 330 VMLVTGANNINEVIWTPFSQSNQ 352
           +M++TGA++I +VI  P +Q  Q
Sbjct: 533 IMIMTGASSIRDVIAFPKTQKAQ 555


>gi|93006011|ref|YP_580448.1| aspartyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|123264609|sp|Q1QBI9|SYD_PSYCK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|92393689|gb|ABE74964.1| aspartyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 608

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 76/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
              + +  ++ R    S++R Y  ++ F+++++  L   +P     ++    T       
Sbjct: 138 RRPQMQDRMVFRAKATSAIRRYLDDHGFLDVETPILTRATPEGARDYLVPSRTRPGNFFA 197

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  + E+
Sbjct: 198 LPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLNEEE 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I+             + +    F +   +T AEA   YA+ D          
Sbjct: 252 IMNINEGLIKHVF----------KTMMDVEFEQFPRMTYAEAMRDYAS-DKPDLRIPLKL 300

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 301 IDVADLMKDVDFKVFAGPANDPKGRV 326



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 51/155 (32%), Gaps = 10/155 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRF 258
           Q+ G+ +                  E     +       +P  +   S        +   
Sbjct: 425 QKIGLDLEMTTCEWAPLWVTDFPMFEET--EDGRWTSMHHPFTKPKGSVEELKTNPESAL 482

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           +  +++     E+      +     Q   FE    +      E        L  L    P
Sbjct: 483 SIAYDMVLNGTEVGGGSLRINTLEMQTAVFEALGID----DQEAEDKFGFLLDALKFGAP 538

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              G+A G DRL+ML+ GA++I +VI  P +++ +
Sbjct: 539 PHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTAE 573


>gi|196250094|ref|ZP_03148788.1| aspartyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|196210278|gb|EDY05043.1| aspartyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 590

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 28/193 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R            L  R+ +  ++R +    +F+E+++  L   +P     ++ 
Sbjct: 123 DVRLKYRYLDLRRPTMFQTLELRHKVAKAVRNFLDGERFLEVETPMLTKSTPEGARDYLV 182

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G E+ +     +R+ +     QPEFT +
Sbjct: 183 PSRVHPGEFYALPQ------SPQIFKQLLMVGGFERYYQITRCFRDEDLRADRQPEFTQI 236

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    E ++     ++    +                      IT  EA +RY   
Sbjct: 237 DIEMSFVDQEDIIDLTERMMAAVVKATKGIDIP---------RPFPRITYDEAMSRY-GS 286

Query: 181 DLGTTLDNPDQPD 193
           D        +  D
Sbjct: 287 DKPDVRFGLELVD 299



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 53/175 (30%), Gaps = 17/175 (9%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL   + +        L     + G  +   D     F  +    +              
Sbjct: 390 DLLLFVADEKAIVAAALGALRLKLGKELGLIDETKLAFLWVTDWPLLEYDEEEGRYYAAH 449

Query: 241 YPAPESALANIY--PADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFE----KEM 292
           +P       +I     +P     + ++L     EL      + +   Q   F      + 
Sbjct: 450 HPFTMPVRDDIPLLETNPGAVRAQAYDLVLNGYELGGGSLRIFERDVQEKMFRALGFDQE 509

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + +++            L       P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 510 EARRQFG--------FLLEAFEYGTPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 556


>gi|192360897|ref|YP_001981523.1| aspartyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|238692418|sp|B3PB55|SYD_CELJU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|190687062|gb|ACE84740.1| aspartyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 601

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 73/184 (39%), Gaps = 20/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  L  R  + S++R Y   + F+++++  L   +P     ++    T       
Sbjct: 132 RRTEMQNNLRFRGKVTSAIRNYLDRHGFLDVETPILTRATPEGARDYLVPSRTHDGKFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S +Q
Sbjct: 192 LPQ------SPQLFKQLLMVAGYDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFMSQDQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M     + R   +                F E  ++  +EA A+Y +   D+   L+  
Sbjct: 246 IMAVTEGMFRELFKDL----------MNIEFEEIRHMPFSEAIAKYGSDKPDMRIPLELV 295

Query: 190 DQPD 193
           D  D
Sbjct: 296 DIKD 299



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 14/128 (10%)

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
              G          P+         P     ++ ++L    +EL      +  P  Q+  
Sbjct: 442 DKGGWTSIHHPFTSPSCTPEELVANPG-AALSRAYDLVLNGVELGGGSVRIHSPAMQQAV 500

Query: 288 FEKE----MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           F+       ++++K            L  L    P   G+A G DRLVML+ GA++I +V
Sbjct: 501 FKILGISPEEQREKFG--------FLLDALSYGAPPHGGLAFGLDRLVMLMVGASSIRDV 552

Query: 343 IWTPFSQS 350
           I  P +QS
Sbjct: 553 IAFPKTQS 560


>gi|157962187|ref|YP_001502221.1| aspartyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189082143|sp|A8H549|SYD_SHEPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157847187|gb|ABV87686.1| aspartyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 597

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 75/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R+ + S++R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMADRIVFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSAQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R   +                  E   +T  EA  R+   D     +  + 
Sbjct: 246 VMDKTEEMVRGLFKELL----------NVDLGEFPKMTFEEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +  + + A      +D    +
Sbjct: 295 IDVADIVKEVEFAVFNGPANDPEGRV 320



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 7/147 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNL--GINCCTILDRYPAPESALANIYPADPRFTK 260
           +AG               +     E     G++        P+  +            + 
Sbjct: 414 KAGEDFDLLQGEWKPLWVVDFPMFERTSDGGLHAMHHPFTAPSNMTPEELEANPIGAISD 473

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            +++     EL      + D   Q   F    +       E        L  L    P  
Sbjct: 474 AYDMVLNGCELGGGSVRIHDSKMQSAVF----RILGINDEEASEKFGFLLEALRYGTPPH 529

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
           +G+A G DR++ML+TGA++I +V+  P
Sbjct: 530 AGLAFGLDRIIMLMTGASSIRDVMAFP 556


>gi|260598340|ref|YP_003210911.1| aspartyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260217517|emb|CBA31699.1| Aspartyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 592

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 72/208 (34%), Gaps = 20/208 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +    +IR                      +   +T AEA  RY +   DL   ++  
Sbjct: 244 VREVMEKLIRQLWLDVKGVDLG----------DFPVMTFAEAERRYGSDKPDLRNPMELV 293

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D  D       A  AG         + +
Sbjct: 294 DVADLLKNVEFAVFAGPANDPKGRVAAL 321



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 62/187 (33%), Gaps = 19/187 (10%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +     R  L        + +  D  W+ ++       
Sbjct: 382 ERTGAQDGDMIFFGADNKKVVADALGALRLKL-----GKDLSLTDDAKWAPLWVIDFPMF 436

Query: 226 IEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +   +G++        P   SA       +      +++     E+      +     Q
Sbjct: 437 EDDGEVGLSAMHHPFTAPKDMSADELKAAPEEAVANAYDMVINGYEVGGGSVRIHRGEMQ 496

Query: 285 RHRF----EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           +  F      E ++++K            L  L    P  +G+A G DRL ML+TG +NI
Sbjct: 497 QTVFGILGINEQEQREKFG--------FLLDALKFGTPPHAGLAFGLDRLTMLLTGTDNI 548

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 549 RDVIAFP 555


>gi|227513283|ref|ZP_03943332.1| aspartyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083484|gb|EEI18796.1| aspartyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 595

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +L RN I  S+  +F    FI+I++ +L   +P     ++            
Sbjct: 134 RRPEMQYNILLRNRIIQSIHSFFDGEGFIDIETPTLTKSTPEGARDYLVPSRVYPGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E+
Sbjct: 194 LPQ------SPQQFKQMLMGAGFDKYYQIARCYRDEDLRGDRQPEFTQIDMEMSFADQEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M      I    + A  K               + +   E+ AR+   D        + 
Sbjct: 248 IMDVTEGFIAKVMKDAMGKDVK---------LPFKRMDWDESMARF-GTDQPDVRFGMEL 297

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 298 KDLSDIMK 305



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 51/155 (32%), Gaps = 8/155 (5%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           L    A++  +       +  I +  +    ++    +            +         
Sbjct: 410 LRVEIAKEQNMIDESKFAFLWIVNWPLFHWDVDLKRYVAAHHPFTMPNEEDVHYLLNDDE 469

Query: 255 DPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           DP   + + +++    +EL      +     Q   F+     K+    E+      FL  
Sbjct: 470 DPHKAYAQSYDIILNGLELGGGSIRIHTRKLQERMFKALGFTKESA--ESQF--GYFLTA 525

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   G+A+G DR V L+    NI +VI  P
Sbjct: 526 LDYGFPPHGGLAIGLDRFVRLLADRENIRDVIAFP 560


>gi|303229389|ref|ZP_07316179.1| aspartate--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515925|gb|EFL57877.1| aspartate--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 600

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +  ++R++F    F+EI++  L   +P     ++            
Sbjct: 140 RRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTPEGARDYLVPSRVNAGTFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F     +R+ +     QPEFT L+   +    E 
Sbjct: 200 LPQ------SPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQPEFTQLDLEMSFVDEED 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +    K                 IT  EA  +Y +       D    
Sbjct: 254 IYALLEQMVAEVFKKTLGKEIP---------LPMPRITWDEAMDKYGSDKPDLRFDMAFT 304

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
               L+     +    V  +
Sbjct: 305 DVTELVKDTEFKVFRSVIDN 324



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 50/164 (30%), Gaps = 13/164 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       ++ +    + E  E              P  E         
Sbjct: 414 ELRLEMARRMNMIDEDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHEDLDKLQSDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  +++    +E+      +     Q   F+     E + K K            L
Sbjct: 474 GSVKAIAYDMVLNGVEIGGGSLRIYQSDVQEKVFKAIGLSEEEAKSKFG--------FML 525

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  P  +G A G DRLVML+    +I +VI  P +QS  +
Sbjct: 526 DAFKYGAPPHAGCAFGLDRLVMLMAKRQSIRDVIAFPKTQSASD 569


>gi|227329757|ref|ZP_03833781.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 598

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQRLKTRARITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R   +                  +   +T AEA  R+   D     +  + 
Sbjct: 244 VREVMEKLVRELWQDVKGVDLG----------DFPIMTFAEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKNIEFKVFSGPANDAKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +  D++W  ++        E    G+         P                   ++
Sbjct: 416 DLSLTKDNSWEPLWVVDFPMFEEDGEGGLAAMHHPFTAPRDMLPSELAANPVSAIANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           +     E+      +     Q+  F      E ++++K            L  L    P 
Sbjct: 476 MVINGYEVGGGSVRIHSGEMQQTVFSILGITEQEQREKFG--------FLLDALKYGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRLVML+TG +NI +VI  P
Sbjct: 528 HAGLAFGLDRLVMLLTGTDNIRDVIAFP 555


>gi|313897477|ref|ZP_07831020.1| aspartate--tRNA ligase [Clostridium sp. HGF2]
 gi|312957847|gb|EFR39472.1| aspartate--tRNA ligase [Clostridium sp. HGF2]
          Length = 581

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 17/201 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ I  S+REY    +FIEI++  L   +P     ++            
Sbjct: 128 RRPVMQQKLMLRHRITHSMREYLDSKEFIEIETPMLGRSTPEGARDYLVPSRVHPGSFYA 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ + FA  +R+ +     Q +FT ++   +  S  +
Sbjct: 188 LPQ------SPQLYKQLLMVSGFERYYQFARCFRDEDLRADRQTDFTQVDLETSFLSDVE 241

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +       S              +T  EA  RY +           Q
Sbjct: 242 IQTMMEEMLQKLMKDVKGMDIS---------IPFPRLTWTEAMNRYGSDKPDNRFGMELQ 292

Query: 192 PDRHLLYLQAQQAGIRVAHDD 212
               L      +       D 
Sbjct: 293 EITELFENCGFKVFADCIADK 313



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 13/149 (8%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G++ + + ++  +    + E  E +            P  E                +
Sbjct: 409 ELGLKKSDEFSYLWVTDFPMFEYSEEDGRWYAMHHPFTRPRDEDMQYIDSDPGKVHAIAY 468

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACL-TEMP 317
           ++     EL      + D   Q   FE     E + ++            F+  L    P
Sbjct: 469 DVVLNGYELGGGSLRIYDGAMQDKMFEVLGFTEEKIQENFG--------WFVDALKYGTP 520

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              G+A G DR+ M+++ + +I +VI  P
Sbjct: 521 PHGGLAFGLDRIAMILSESESIRDVIAFP 549


>gi|255948264|ref|XP_002564899.1| Pc22g08870 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591916|emb|CAP98175.1| Pc22g08870 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 577

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 101/334 (30%), Gaps = 43/334 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            +  R     + R+ F E + +E+   ++      G  T        L   D+  +  YL
Sbjct: 273 VMKVRAATLRAFRKAFEETRMLEVTPPAMVQTQVEGGST--------LFGFDYYGENAYL 324

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L +    ++C   ++R  +     H  E+T +E      ++  L+    
Sbjct: 325 TQSSQLYLETCLPS-LGDVYCVCPSFRAEKSLTRRHLSEYTHIEAELDFITFTDLLDHLE 383

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           ++I     V +  +   +         P++   +  F R    D    L   + P+    
Sbjct: 384 DVI---CRVIDYTLAEPEIAGYIKQLNPDFKPPSRPFRRMKYDDAIQWLIEHEIPNEE-- 438

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY-PADP 256
                           + D  +     ++     IN    L  +PA   A      P D 
Sbjct: 439 -----------GQPHKFGDDIAEAAERRM--TDIINQPIFLTHFPANIKAFYMKKAPEDR 485

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACL 313
           R T+  ++    +         +D  +     E     K +  + +      D+      
Sbjct: 486 RVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMAAYKHEGMDPSPYYWYTDQR----K 536

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +     + +    P 
Sbjct: 537 YGTSPHGGYGLGLERFLAWLCARYTVRDCSLYPR 570


>gi|227111612|ref|ZP_03825268.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 598

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQRLKTRARITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R   +                  +   +T AEA  R+   D     +  + 
Sbjct: 244 VREVMEKLVRELWQDVKGVDLG----------DFPIMTFAEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDIEFKVFSGPANDAKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +  D++W  ++        E    G+         P                   ++
Sbjct: 416 DLSLTKDNSWEPLWVVDFPMFEEDGEGGLAAMHHPFTAPRDMLPSELAANPVSAIANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           +     E+      +     Q+  F      E ++++K            L  L    P 
Sbjct: 476 MVINGYEVGGGSVRIHSGEMQQTVFSILGITEQEQREKFG--------FLLDALKYGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRLVML+TG +NI +VI  P
Sbjct: 528 HAGLAFGLDRLVMLLTGTDNIRDVIAFP 555


>gi|20146174|dbj|BAB88974.1| lysyl-tRNA synthetase [Bacillus cereus]
          Length = 183

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 75/188 (39%), Gaps = 9/188 (4%)

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            + +   LY++ + E   K+L+  G EK++     +RN      H PEFTM+E Y A+  
Sbjct: 4   HNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYAD 63

Query: 129 YEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
           Y+ +MK   +++   A +V       + +   N   E   + + +A  +Y+  D    + 
Sbjct: 64  YKDIMKLTEDMVAHIAKKVLGTTTIQYGDYEINLEPEWTRLHMVDAIKQYSGADFWNPMS 123

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                        A++  + +        I +    +K+E    +   T +  +P   S 
Sbjct: 124 I------EEARELAKEHNVEIKDTMEVGHIINEFFEQKVEDK--LIQPTFIYGHPVEISP 175

Query: 248 LANIYPAD 255
           LA     D
Sbjct: 176 LAKKNDED 183


>gi|213025126|ref|ZP_03339573.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 189

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 42/95 (44%), Gaps = 17/95 (17%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 99  LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSKILAGIRQFMVARGFMEVETP 158

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
            +Q  PG  +  R F T     + +   +YL+ +P
Sbjct: 159 MMQVIPGGAS-ARPFITH---HNALDLDMYLRIAP 189


>gi|154686896|ref|YP_001422057.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166225318|sp|A7Z750|SYD_BACA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|154352747|gb|ABS74826.1| AspS [Bacillus amyloliquefaciens FZB42]
          Length = 592

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 18/223 (8%)

Query: 11  NRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFS 63
            +  +   RRP     L  R+ +  S+R +  EN F++I++  L   SP     ++    
Sbjct: 128 LKHRYLDLRRPAMFQTLQMRHQVTKSIRHFLDENGFLDIETPILTKSSPEGARDYLVPSR 187

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                   + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++  
Sbjct: 188 VHEGEFYALPQ------SPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQPEFTQIDIE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  S E +M     ++                               +   R+  +   
Sbjct: 242 MSFMSQEDIMALAEEMMAKVMLETKGVEVPLPLPRMTYEEAMNSYGSDKPDTRFGMLLTD 301

Query: 184 TTLDNPDQPDRHLLYLQA-----QQAGIRVAHDDTWSDIFSRI 221
            +    D   +      A     +   ++ A  D        +
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGAAGDYSRKDIDAL 344



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 52/168 (30%), Gaps = 11/168 (6%)

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCTILDRYPA 243
           L   D+ +     L A +  +          +F+ +      +  +           +P 
Sbjct: 395 LFGADKFEVVAQSLGALRLKLGKERGLIDESLFNFLWVVDWPLLEHDEEEGRFYAAHHPF 454

Query: 244 PESALANIY----PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                 ++       +    + ++L     EL      + +   Q   F      K+   
Sbjct: 455 TMPVREDLDLIETAPEDMKAQAYDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFTKE--- 511

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L       P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 512 -EAEEEFGYLLEAFEYGAPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 558


>gi|261405429|ref|YP_003241670.1| aspartyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281892|gb|ACX63863.1| aspartyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 592

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 70/230 (30%), Gaps = 17/230 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+      R++  +  F+++++  L   SP     ++            
Sbjct: 134 RRPEMQKTLMLRSKASKVFRDFLDDEGFVDVETPILTKSSPEGARDYLVPSRVHAGEFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 194 LPQ------SPQIYKQLLMVSGLERYYQIARCFRDEDLRADRQPEFTQVDIETSFMDRED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L+     ++    +                 +  + I+ A+A  +Y +            
Sbjct: 248 LLNMMEQLMVKLFKETIGVEL---------ATPFQRISYADAMGKYGSDKPDLRFGMELI 298

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               ++     +    V          +             +      RY
Sbjct: 299 EMNDIVASSGVKVFSSVIEKGGEVKCLNAKGCGTWTRKEIDDLGPYAARY 348



 Score = 91.6 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 48/161 (29%), Gaps = 7/161 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +Q G+   ++  ++ +    L    E              P  E         
Sbjct: 407 ALRLKIGRQLGLINDNEYKFAWVLDFPLFSYDEEAKRYVAEHHPFTRPKDEDLGLMDTDP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                + +++     E+      +     Q   F         +  E  +      +   
Sbjct: 467 LAVRAEAYDIVLNGYEVGGGSMRIYKREIQEKMF-----AALGMSPEVAHDKFGYLMDAF 521

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   GIA G DRLVML+ G  N+ E I  P + S  +
Sbjct: 522 EYGTPPHGGIAFGLDRLVMLLAGRTNLRETIAFPKTASATD 562


>gi|195614258|gb|ACG28959.1| asparaginyl-tRNA synthetase, cytoplasmic 3 [Zea mays]
          Length = 561

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 84/286 (29%), Gaps = 27/286 (9%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRA 125
              D  ++  +L  S +   +    A    ++ F   +R        H  EF M+E   A
Sbjct: 291 FENDFFKRQAFLTVSGQLQVETYACA-LSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 349

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             + +  M      ++   +                + +        A  R   +     
Sbjct: 350 FANLQDDMNCAEKYVQYLCKWLLDHCQEDMEFMVKNYDKS-------AIERLELVSSTPF 402

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +         LL     +   +  +   W    +      +  ++      I+  YP   
Sbjct: 403 VRISYTKAVELLKNVTDK---KFDNKVEWGIDLASEHERYLTEDIFKKPV-IVYNYPKGI 458

Query: 246 SALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIYNET 302
            A        D        L            EL+   ++  R +  ++      +  E 
Sbjct: 459 KAFYMRLNDDDKTVAAMDVLVPK-------VGELIGGSQREERLDVLEQRILDAGLPLEP 511

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           Y   E +L        + SG  +GF+R+++  TG  NI +VI  P 
Sbjct: 512 Y---EWYLDLRRFGSVKHSGFGLGFERMILFATGMENIRDVIPFPR 554


>gi|295398026|ref|ZP_06808082.1| aspartate--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973784|gb|EFG49555.1| aspartate--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 589

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 71/195 (36%), Gaps = 9/195 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    +  R+ + S++  Y  + +FIE+++  L   +P     ++            
Sbjct: 134 RRPKMANNMKLRHQVVSTIHRYLDDQEFIEVETPYLTKSTPEGARDYLVPSRVHPGEFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L++AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 194 LPQ------SPQLFKQLLMSAGMDRYYQVVRCFRDEDLRGDRQPEFTQIDLETTFLTQEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +       +                  +   R+  ++L    D  DQ
Sbjct: 248 IRDLVEGMLKTVVKRTKNIDITENFPIITYDDAMARYGNDKPDTRF-GLELVEISDIVDQ 306

Query: 192 PDRHLLYLQAQQAGI 206
            +  +     ++ GI
Sbjct: 307 YEFKVFNQAIEKGGI 321



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 53/155 (34%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     ++  +   +   +  + +  L+E  E     N        P  E         
Sbjct: 407 EIRLKFGRELDLMDKNQFNFLWVTNWPLLEYDEDTKRFNAMHHPFTMPNEEDVDKLAENP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
           +  + + +++     E+      +     Q   F      K   + E   I +    L  
Sbjct: 467 EDVYAQAYDIVLNGYEIGGGSLRIYQKDMQMQMF------KALGFTEESAISQFGFLLNA 520

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   G+A+G DRLVML+ G  NI EVI  P
Sbjct: 521 LDYGFPPHGGLALGLDRLVMLLAGEENIREVIAFP 555


>gi|295706711|ref|YP_003599786.1| aspartyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804370|gb|ADF41436.1| aspartyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 593

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 70/191 (36%), Gaps = 21/191 (10%)

Query: 16  YRRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR         RN I  ++R++  +N F+++++  L   +P     ++           
Sbjct: 135 LRRSEMFNTLKMRNDITKTIRDFLDQNDFLDVETPILTKSTPEGARDYLVPSRVHEGEFY 194

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++   +  S E
Sbjct: 195 ALPQ------SPQIFKQLLMVSGVERYYQIARCFRDEDLRADRQPEFTQIDIETSFLSQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M     ++    +       +         +    ++  EA +RY   D   T    +
Sbjct: 249 DIMTMTEEMMSKVMKRVKDLDIT---------TPFPRMSYDEAMSRY-GSDKPDTRFEME 298

Query: 191 QPDRHLLYLQA 201
             +   L    
Sbjct: 299 LVNLSELVKDC 309



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 49/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ GI       +  +    L+E  E +            P  E         
Sbjct: 410 ALRLKLAKEQGIIDETKFNFLWVTDWPLLEHDEEDNRYYAAHHPFTMPVREDLPMLESDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L     EL      + +   Q   F+      +    E Y      L    
Sbjct: 470 GQVRAQAYDLVLNGYELGGGSLRIYERDIQEKMFKTLGFTLE----EAYEQFGFLLEAFE 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 526 YGTPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 558


>gi|258614516|ref|ZP_05712286.1| lysyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 56

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           ++   +E + +DEDFL  L   MP + G+ +G DRLVML+T A +I +V+  P  +
Sbjct: 1   RELGNDEAHGVDEDFLEALEYGMPPTGGLGIGIDRLVMLLTDAQSIRDVLLFPTMR 56


>gi|217077880|ref|YP_002335598.1| aspartyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|226736545|sp|B7IE30|SYD_THEAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|217037735|gb|ACJ76257.1| aspartyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 581

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 80/219 (36%), Gaps = 32/219 (14%)

Query: 4   IPSQPWWNR---DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P     ++   D   + R            L+ R+ +  + RE+  ++ F+EI++  L 
Sbjct: 106 LPPFYPGDKVSEDLRLKYRYLDLRDKNMNKNLIIRHKMAQAAREFLNKHGFLEIETPYLT 165

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +Q   +   Y L  SP+   + L+ +G +K + FA  +R+ +
Sbjct: 166 KSTPEG---ARDFLVPSRLQ---KGKFYALPQSPQLFKQLLMVSGFDKYYQFARCFRDED 219

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                QPEFT ++   +    E ++    N +R        K+            + + I
Sbjct: 220 LRADRQPEFTQIDIEMSFVEMEDVINLMENFVRYVYSSVGIKLPE----------KFDRI 269

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
           T  EA   Y   D        +  D    +       I+
Sbjct: 270 TYDEAMEIY-GSDKPDRRFGMELKDLTNYFKDTDFKIIK 307



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 46/148 (31%), Gaps = 10/148 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++    +        +     +E  E         +   +P       +  P D    
Sbjct: 404 IAKEHFKNLEEGFDALWVVDFPFLEWNEEE----KRYVARHHPFTMPKNIDSKPEDI-KA 458

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      + +   QR  FE           E        L  L    P 
Sbjct: 459 YAYDMILNGNEIGGGSIRIHNSEIQRKVFE----IIGLTNKEAEEKFGFLLEALKYGAPP 514

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             GIA GFDR+V +    ++I +VI  P
Sbjct: 515 HGGIAFGFDRMVSIALRTSSIRDVIAFP 542


>gi|308174456|ref|YP_003921161.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607320|emb|CBI43691.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554375|gb|AEB24867.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912780|gb|AEB64376.1| aspartyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 592

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 73/223 (32%), Gaps = 18/223 (8%)

Query: 11  NRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFS 63
            +  +   RRP     L  R+ +  S+R +  EN F++I++  L   SP     ++    
Sbjct: 128 LKHRYLDLRRPAMFQTLQMRHQVTKSIRHFLDENGFLDIETPILTKSSPEGARDYLVPSR 187

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                   + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++  
Sbjct: 188 VHEGEFYALPQ------SPQIFKQLLMVSGFERYYQVARCFRDEDLRADRQPEFTQIDIE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  S E +M     ++            S                  +   R+  +   
Sbjct: 242 MSFMSQEDIMALAEKMMAKVMLETKGVEVSLPLPRMTYEEAMNSYGSDKPDTRFGMLLTD 301

Query: 184 TTLDNPDQPDRHLLYLQA-----QQAGIRVAHDDTWSDIFSRI 221
            +    D   +      A     +   ++ A  D        +
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGAAGDYSRKDIDAL 344



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 52/168 (30%), Gaps = 11/168 (6%)

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCTILDRYPA 243
           L   D+ +     L A +  +          +F+ +      +  +           +P 
Sbjct: 395 LFGADKFEVVAQSLGALRLKLGKERGLIDESLFNFLWVVDWPLLEHDEEEGRFYAAHHPF 454

Query: 244 PESALANIY----PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                 ++       +    + ++L     EL      + +   Q   F      K+   
Sbjct: 455 TMPVREDLDLIETAPEDMKAQAYDLVLNGYELGGGSIRIFEKDVQEKMFGLLGFTKE--- 511

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L       P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 512 -EAEEEFGYLLEAFEYGAPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 558


>gi|242041411|ref|XP_002468100.1| hypothetical protein SORBIDRAFT_01g039570 [Sorghum bicolor]
 gi|241921954|gb|EER95098.1| hypothetical protein SORBIDRAFT_01g039570 [Sorghum bicolor]
          Length = 561

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 79/284 (27%), Gaps = 23/284 (8%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRA 125
              D  ++  +L  S +   +    A    ++ F   +R        H  EF M+E   A
Sbjct: 291 FENDFFKRQAFLTVSGQLQVETYACA-LSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 349

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             + +  M      ++   +                + +        A  R   +     
Sbjct: 350 FANLQDDMNCAEKYVQYLCKWLLDHCQEDMEFMVKNYDKS-------AIERLELVSSTPF 402

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +         LL     +   +  +   W    +      +  ++      I+  YP   
Sbjct: 403 VRISYTKAVELLKNVTDK---KFDNKVEWGIDLASEHERYLTEDIFKKPV-IVYNYPKGI 458

Query: 246 SALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            A        D        L     EL             + R          +  E Y 
Sbjct: 459 KAFYMRLNDDDKTVAAMDVLVPKVGELIGGSQREERLDVLKQRILD-----AGLPLEPY- 512

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             E +L        + SG  +GF+R+++  TG  NI +VI  P 
Sbjct: 513 --EWYLDLRRFGSVKHSGFGLGFERMILFATGMENIRDVIPFPR 554


>gi|223948185|gb|ACN28176.1| unknown [Zea mays]
          Length = 561

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 79/284 (27%), Gaps = 23/284 (8%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRA 125
              D  ++  +L  S +   +    A    ++ F   +R        H  EF M+E   A
Sbjct: 291 FENDFFKRQAFLTVSGQLQVETYACA-LSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 349

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             + +  M      ++   +                + +        A  R   +     
Sbjct: 350 FANLQDDMNCAEKYVQYLCKWLLDHCQEDMEFMVKNYDKS-------AIERLELVSSTPF 402

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +         LL     +   +  +   W    +      +  ++      I+  YP   
Sbjct: 403 VRISYTKAVELLKNVTDK---KFDNKVEWGIDLASEHERYLTEDIFKKPV-IVYNYPKGI 458

Query: 246 SALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            A        D        L     EL             + R          +  E Y 
Sbjct: 459 KAFYMRLNDDDKTVAAMDVLVPKVGELIGGSQREERLDVLKQRILD-----AGLPLEPY- 512

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             E +L        + SG  +GF+R+++  TG  NI +VI  P 
Sbjct: 513 --EWYLDLRRFGSVKHSGFGLGFERMILFATGMENIRDVIPFPR 554


>gi|227510276|ref|ZP_03940325.1| aspartyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189928|gb|EEI69995.1| aspartyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 595

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +L RN I  S+  +F    FI+I++ +L   +P     ++            
Sbjct: 134 RRPEMQYNILLRNRIIQSIHSFFDGEGFIDIETPTLTKSTPEGARDYLVPSRVYPGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E+
Sbjct: 194 LPQ------SPQQFKQMLMGAGFDKYYQIARCYRDEDLRGDRQPEFTQIDMEMSFADQEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M      I    + A  K               + +   E+ AR+   D        + 
Sbjct: 248 IMDVTEGFIAKVMKDAMGKDVK---------LPFKRMDWDESMARF-GTDQPDVRFGMEL 297

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 298 KDLSDIMK 305



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 8/155 (5%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           L    A++  +       +  I +  +    ++    +            +         
Sbjct: 410 LRVEIAKEQNMIDESKFAFLWIVNWPLFHWDVDLKRYVAAHHPFTMPNEEDVHYLLNDDE 469

Query: 255 DPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           DP   + + +++    +EL      +     Q   F+     K+    E       FL  
Sbjct: 470 DPHKAYAQSYDIILNGLELGGGSIRIHTRKLQERMFKALGFTKESA--EAQF--GYFLTA 525

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   G+A+G DR V L+    NI +VI  P
Sbjct: 526 LDYGFPPHGGLAIGLDRFVRLLADRENIRDVIAFP 560


>gi|307107264|gb|EFN55507.1| hypothetical protein CHLNCDRAFT_35428 [Chlorella variabilis]
          Length = 710

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 76/212 (35%), Gaps = 31/212 (14%)

Query: 5   PSQPWWNRDF-----HYRRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNET 57
           P +    +         R    L  R+ I   +R +  + + F+E+++  L   +P    
Sbjct: 206 PREELRLKHRVLDLRRPRMADNLRLRHAIVRCIRRFLEDGHGFLEVETPILTRSTPEGAR 265

Query: 58  -HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH-------AWRNGEQ 109
            ++     +      + +      SP+   + L+ AG ++ +  +H        +R+ + 
Sbjct: 266 DYLVPSRLQAGDWYALPQ------SPQLFKQMLMVAGFDRYYQASHGAGGSSRCFRDEDL 319

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
               QPEFT L+   A    + +M    +++    +              +  +  + ++
Sbjct: 320 RADRQPEFTQLDLEMAWMDRDAIMGLMESMVATVFQQVAG---------VDVAAPFQRLS 370

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
            AEA A+YA+ D        +  +      + 
Sbjct: 371 YAEAMAKYAS-DKPDLRFGLEMAEVTEAVREC 401



 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 17/92 (18%)

Query: 262 FELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACLT- 314
           +++    +E+      +     Q+  F      E+E + K              L C   
Sbjct: 576 YDMVYNGVEIGGGSLRIYRRDIQQQVFATIGLSEEEARSKFG----------YLLDCFEI 625

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DRL ML+ G  +I +VI  P
Sbjct: 626 GAPPHGGIAFGLDRLAMLLAGVPSIRDVIAFP 657


>gi|169350230|ref|ZP_02867168.1| hypothetical protein CLOSPI_00974 [Clostridium spiroforme DSM 1552]
 gi|169293013|gb|EDS75146.1| hypothetical protein CLOSPI_00974 [Clostridium spiroforme DSM 1552]
          Length = 583

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 73/188 (38%), Gaps = 22/188 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP +    + R+ I  S+R++   + FI+I++  L   +P      R F     + +  
Sbjct: 128 RRPVMQNKIITRHKITRSIRDFLDNHDFIDIETPYLNRSTPEG---ARDFLVPSRVHNG- 183

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 184 --SFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRLDRQPEFTQVDVEMSFMTTDE 241

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I                   +       +T  EA  +Y  ID        + 
Sbjct: 242 IITLGEQLIAKVMNDVKG---------IDLKLPLPRMTWHEAMEKY-GIDKPDIRFGLEL 291

Query: 192 PDRHLLYL 199
            + + +  
Sbjct: 292 VNLNEVVK 299



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 43/150 (28%), Gaps = 13/150 (8%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +    +  +  +    + E  E              P                   
Sbjct: 410 KELKLYRQDEYAFLWVVDFPMFEYDEETKRYYAVHHPFTRPKDSDLDKIENDPANCLADA 469

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEM 316
           +++     EL      + +   Q   F      + +   +           F+       
Sbjct: 470 YDIVLNGFELGGGSQRIYEQELQERAFRALGFTQERINSQFG--------WFVEAFQYGT 521

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G A+G DRL M++T + NI EVI  P
Sbjct: 522 PPHGGFALGLDRLAMILTNSENIREVIAFP 551


>gi|329926805|ref|ZP_08281213.1| aspartate--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328939005|gb|EGG35373.1| aspartate--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 592

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 70/230 (30%), Gaps = 17/230 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+      R++  +  F+++++  L   SP     ++            
Sbjct: 134 RRPEMQKTLMLRSKASKVFRDFLDDEGFVDVETPILTKSSPEGARDYLVPSRVHAGEFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 194 LPQ------SPQIYKQLLMVSGLERYYQIARCFRDEDLRADRQPEFTQVDIETSFMDRED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L+     ++    +                 +  + I+ A+A  +Y +            
Sbjct: 248 LLNMMEQLMVKLFKETIGVEL---------ATPFQRISYADAMGKYGSDKPDLRFGMELI 298

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               ++     +    V          +             +      RY
Sbjct: 299 EMNDIVASSGVKVFSSVIEKGGEVKCLNAKGCGTWTRKEIDDLGPYAARY 348



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 48/161 (29%), Gaps = 7/161 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +Q G+   ++  ++ +    L    E              P  E         
Sbjct: 407 ALRLKIGRQLGLINDNEYKFAWVLDFPLFSYDEEAKRYVAEHHPFTRPKDEDLELMDTDP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                + +++     E+      +     Q   F         +  E  +      +   
Sbjct: 467 LAVRAEAYDIVLNGYEVGGGSMRIYKREIQEKMF-----AALGMSPEVAHDKFGYLMDAF 521

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   GIA G DRLVML+ G  N+ E I  P + S  +
Sbjct: 522 EYGTPPHGGIAFGLDRLVMLLAGRTNLRETIAFPKTASATD 562


>gi|296133426|ref|YP_003640673.1| aspartyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032004|gb|ADG82772.1| aspartyl-tRNA synthetase [Thermincola potens JR]
          Length = 595

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 19/183 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+    ++RE+  +  F+EI++  L   +P     ++            
Sbjct: 141 RRPDMQRNMILRHKTTMAIREFLDKAGFLEIETPMLTKSTPEGARDYLVPSRVNPGKFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F     +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIFKQILMVAGMEKYFQIVRCFRDEDLRADRQPEFTQVDMEMSFVDIDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++  A   A  +I +            E +T  EA  RY   D        + 
Sbjct: 255 VLALTEEMLAHAFRAAGIEITT----------PFERLTYKEAIDRY-GSDKPDLRFGLEL 303

Query: 192 PDR 194
            D 
Sbjct: 304 KDF 306



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 54/165 (32%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++  +       +  I    L+E  E              P  E         
Sbjct: 413 HLRVELARRLNLIDDKVFKFVWIVEFPLLEYDEEERRYVAIHHPFTSPMDEDIPLLDSDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                K +++    +EL      +     Q   F       +E  EK     E +     
Sbjct: 473 LVVRAKAYDVVLNGVELGGGSIRIHSRQVQEKMFTLLGLSPEEAIEKFGFMLEAFE---- 528

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                   P   GIA G DR+VML+ G ++I +VI  P +QS  +
Sbjct: 529 -----YGTPPHGGIAFGLDRMVMLMAGRDSIRDVIAFPKTQSATD 568


>gi|242033185|ref|XP_002463987.1| hypothetical protein SORBIDRAFT_01g010060 [Sorghum bicolor]
 gi|241917841|gb|EER90985.1| hypothetical protein SORBIDRAFT_01g010060 [Sorghum bicolor]
          Length = 561

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 79/284 (27%), Gaps = 23/284 (8%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRA 125
              D  ++  +L  S +   +    A    ++ F   +R        H  EF M+E   A
Sbjct: 291 FENDFFKRQAFLTVSGQLQVETYACA-LSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 349

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             + +  M      ++   +                + +        A  R   +     
Sbjct: 350 FANLQDDMNCAEKYVQYLCKWLLDHCREDMEFMVKNYDKS-------AIERLELVSSTPF 402

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +         LL     +   +  +   W    +      +  ++      I+  YP   
Sbjct: 403 VRISYTKAVELLKNVTDK---KFDNKVEWGIDLASEHERYLTEDIFKKPV-IVYNYPKGI 458

Query: 246 SALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
            A        D        L     EL             + R          +  E Y 
Sbjct: 459 KAFYMRLNDDDKTVAAMDVLVPKVGELIGGSQREERLDVLKQRILD-----AGLPLEPY- 512

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             E +L        + SG  +GF+R+++  TG  NI +VI  P 
Sbjct: 513 --EWYLDLRRFGSVKHSGFGLGFERMILFATGMENIRDVIPFPR 554


>gi|261494081|ref|ZP_05990584.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261310247|gb|EEY11447.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 588

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 67/207 (32%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAEKLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +                  +   +T  EA  R+   D     +  + 
Sbjct: 245 VRALMEAMIHGLWKKTLGVDLG----------KFPMMTWNEAMTRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   +             +D    + 
Sbjct: 294 VDVADILKSVDFKVFSGPANDPKGRVV 320



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 54/169 (31%), Gaps = 19/169 (11%)

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE--PNLGINCCTILDRYPAP 244
           DN       +  L+ +        D T       I     E      ++        P  
Sbjct: 398 DNWHVATNAIGALRLKVGNDLGLTDTTAWKPLWVIDFPMFERDDEGNLSAMHHPFTSPKE 457

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKI 298
            S    +   +      +++     E+      +     Q+  F      E+E +EK   
Sbjct: 458 LSPEELVQDPENAVANAYDMVINGYEVGGGSVRIFSQQMQQTVFSILGINEEEQKEKFG- 516

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                      L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 ---------FLLDALKFGTPPHAGLAFGLDRLTMLITGTDNIRDVIAFP 556


>gi|261496078|ref|ZP_05992488.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308328|gb|EEY09621.1| aspartate--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
          Length = 588

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 67/207 (32%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAEKLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +                  +   +T  EA  R+   D     +  + 
Sbjct: 245 VRALMEAMIHGLWKKTLGVDLG----------KFPMMTWNEAMTRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   +             +D    + 
Sbjct: 294 VDVADILKSVDFKVFSGPANDPKGRVV 320



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 54/169 (31%), Gaps = 19/169 (11%)

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE--PNLGINCCTILDRYPAP 244
           DN       +  L+ +        D T       I     E      ++        P  
Sbjct: 398 DNWHVATNAIGALRLKVGNDLGLTDTTAWKPLWVIDFPMFERDDEGNLSAMHHPFTSPKE 457

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKI 298
            S    +   +      +++     E+      +     Q+  F      E+E +EK   
Sbjct: 458 LSPEELVQDPENAVANAYDMVINGYEVGGGSVRIFSQQMQQTVFSILGINEEEQKEKFG- 516

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                      L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 ---------FLLDALKFGTPPHAGLAFGLDRLTMLITGTDNIRDVIAFP 556


>gi|313888446|ref|ZP_07822113.1| aspartate--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845475|gb|EFR32869.1| aspartate--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 591

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 55/161 (34%), Gaps = 13/161 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+   +    D     I    L E  E              P  E     +   
Sbjct: 412 NLRNKIARDMDLIDEDDYKLVWITEFPLFEYDEEEGRYVAMHHPFTSPLDEDVDKLVSDK 471

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +    K +++     E+      + DP  Q   FE     E + K+K            L
Sbjct: 472 ENARAKAYDIVINGDEMGGGSIRINDPEVQEKMFEALGLSEEEAKEKFG--------FLL 523

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                  P   G+A G DRLVML TGA +I +VI  P +Q+
Sbjct: 524 EAFKYGAPPHGGLAYGLDRLVMLFTGAKSIRDVIAFPKTQA 564



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 28/200 (14%)

Query: 14  FHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRA 61
              + R            L+ R+ I    R++F EN FIE+++  L   +P     ++  
Sbjct: 129 MRLKYRTLDLRKPSMQRNLMIRSKIYKITRDFFYENGFIEVETPMLTKPTPEGARDYLVP 188

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                     + +      SP+   + L+ AG ++       +R+ +     QPEFT ++
Sbjct: 189 SRVNPGEFYALPQ------SPQLMKQLLMVAGMDRYIQITKCFRDEDLRANRQPEFTQID 242

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    E +M      ++   +    K               + +  +EA  R+  +D
Sbjct: 243 MELSFVDEEDVMGINERFLQKLFKEVINKDIE---------LPIKRMKYSEAMDRF-GVD 292

Query: 182 LGTTLDNPDQPDRHLLYLQA 201
                   +  D   +    
Sbjct: 293 KPDLRFGMELKDISEIVKTC 312


>gi|307721114|ref|YP_003892254.1| aspartate--tRNA(Asn) ligase [Sulfurimonas autotrophica DSM 16294]
 gi|306979207|gb|ADN09242.1| aspartate--tRNA(Asn) ligase [Sulfurimonas autotrophica DSM 16294]
          Length = 584

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 71/200 (35%), Gaps = 14/200 (7%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTEL 66
             + D           R+    + R    EN F+E+++  L   +P     ++       
Sbjct: 131 LRDPDMF----EVFRLRSKAAIAARNILDENGFLEVETPILTKSTPEGARDYLVPSRVHN 186

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   + 
Sbjct: 187 GEFYALPQ------SPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQPEFTQIDVEMSF 240

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
            + E ++K   +++                      +  E+    +   RY ++ +   +
Sbjct: 241 CNQEDVIKVAEDLLVAMFGACG-VDVKPPFNRITHKNAMEWYGSDKPDLRY-DLKMVDVI 298

Query: 187 DNPDQPDRHLLYLQAQQAGI 206
           D  ++ D  +    A++  +
Sbjct: 299 DIFERCDNEIFTNIAKKPHV 318



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 5/108 (4%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P       +    +   +  +++     EL      +     Q   F+    E     
Sbjct: 448 HHPFTMPKDTDKDDVEEIESIAYDIVLNGTELGGGSIRIHKEEIQEEVFKLLGIE----E 503

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L  L    P   G A+GFDRL+ML+T  ++I +VI  P
Sbjct: 504 EEAQEKFGFLLDALKFGAPPHGGFALGFDRLIMLLTKKSSIRDVIAFP 551


>gi|170024382|ref|YP_001720887.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|238688453|sp|B1JLL5|SYD_YERPY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169750916|gb|ACA68434.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 598

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKSRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMSADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGVDLGDFPVMTFAEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVASLVKDVEFKVFSGPANDAKGRV 318



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 42/125 (33%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLTAMHHPFTAPKDMSPEQLAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQTVF 500

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E E +EK              L  L    P  +G+A G DRLVML+TG +NI +
Sbjct: 501 GILGITEDEQREKFG----------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRD 550

Query: 342 VIWTP 346
           VI  P
Sbjct: 551 VIAFP 555


>gi|259485979|tpe|CBF83457.1| TPA: asparaginyl-tRNA synthetase Slm5, putative (AFU_orthologue;
           AFUA_3G09630) [Aspergillus nidulans FGSC A4]
          Length = 537

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 63/384 (16%), Positives = 99/384 (25%), Gaps = 52/384 (13%)

Query: 15  HYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS---PGNETHIR-AF 62
           H R R  L       R+     L   F       F+++    +  S      ET      
Sbjct: 148 HLRFRTPLNALLARFRSECLYQLGNVFRGAPNGGFVQVHPPVITSSDCEGAGETFAVIPR 207

Query: 63  ST-----ELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQP 115
            T          DH  R P YL  S +   +   AA    ++  +  +R  +     H  
Sbjct: 208 ETLIKGLPKEEHDHFFRAPKYLNVSSQLHLEAY-AAELGNVWTLSPMFRAEKSDTPRHLS 266

Query: 116 EFTMLEWYRAH-ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA- 173
           EF MLE         + L      ++R           + + ++      PE     E  
Sbjct: 267 EFYMLEAEVNFLSDLDALTDTVEYLLRDLTRRLYDTPAAQEILSIKRDKGPETQDSGEQI 326

Query: 174 --FARYANIDLGTTLDNPDQPDRHLLYLQAQQAG-IRVAHDDTWSDIFSRILIEKIEPNL 230
               R+A++  G+        D      +A   G        TW+        + I   L
Sbjct: 327 DLHQRWADLMSGSKWRCITYSDAIAALQEAVSQGKAAFEFSPTWTGGLQLEHEQYIVNTL 386

Query: 231 GINCCTILDRYPAPESALAN--------IYPADPRFTKRFELYACNIELCNACDELLDPI 282
                  +  YP                             L     E+           
Sbjct: 387 NNGQPIFVTDYPKVIKPFYMAPSHTQSNPKAEGETVACFDLLLPEVSEVAGGSLREHRLP 446

Query: 283 EQRHRFEKEMQEK--------KKIYNETYPID----EDF-----LACLT--EMPQSSGIA 323
           E      +    K        +    E         ED       A L         G  
Sbjct: 447 ELIQNMREHNLIKTSPSNSEEEANQGEAPYPHLLPGEDLSHLQWYADLRRWGSAPHGGFG 506

Query: 324 MGFDRLVMLVTGANNINEVIWTPF 347
           +GFDR +  +TG  +I + +  P 
Sbjct: 507 LGFDRFLGYLTGVQSIRDTVAFPR 530


>gi|312172686|emb|CBX80942.1| Aspartyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 595

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +  F++I++  L   +P     ++            
Sbjct: 130 RRPDMANRLKARAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R                          +T AEA  RY   D     +  + 
Sbjct: 244 VREVMERLVRNLWLDVKSVDLG----------AFPIMTFAEAMRRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLLKDIEFKVFSGPANDAKGRV 318



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S        +      +++     E+      + +   Q+  F
Sbjct: 441 EQGLTAMHHPFTAPKDMSPEQLKNAPESAIANAYDMVINGYEVGGGSVRIHNGQMQQTVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 GILGISEHEQREKFG--------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|168001325|ref|XP_001753365.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695244|gb|EDQ81588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 683

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 23/188 (12%)

Query: 4   IPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNE 56
           +PS+    R  H   R       L  R+ I   +R +  + + FIEI++  L   +P   
Sbjct: 211 MPSEEVRLRYRHLDLRRAQMNTNLRIRHNIIKLMRRHLEDVHDFIEIETPILTKSTPEGA 270

Query: 57  T-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
             ++     +      + +      SP+   + L+ +G  + +  A  +R+ +     QP
Sbjct: 271 RDYLVPSRVQPGDFYALPQ------SPQLFKQMLMVSGFNRYYQLARCFRDEDLRADRQP 324

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EFT L+   +    E +++    ++R   +                 +    +T AEA +
Sbjct: 325 EFTQLDLELSFTPLEDMLELNEGLMRHVFKQIIGVDLP---------NPFRRVTYAEAMS 375

Query: 176 RYANIDLG 183
           RY +    
Sbjct: 376 RYGSDKPD 383



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 41/138 (29%), Gaps = 15/138 (10%)

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
           +     +    +              +P       ++          ++L    +E+   
Sbjct: 522 AHAILWVTDFPMFEWNEDEQRLEALHHPFTAPHPDDMGDLKNARALAYDLVYNGVEIGGG 581

Query: 275 CDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDR 328
              +     Q           +E +EK     E   +           P   GIA G DR
Sbjct: 582 SLRIYKRSVQEKVLSAIGLTPEEAEEKFGFLLEALDL---------GAPPHGGIAYGLDR 632

Query: 329 LVMLVTGANNINEVIWTP 346
           LVML+ G  +I +VI  P
Sbjct: 633 LVMLLAGETSIRDVIAFP 650


>gi|85712315|ref|ZP_01043366.1| Aspartyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693942|gb|EAQ31889.1| Aspartyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 590

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 75/217 (34%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R  + S++R +  +N F++I++  L   +P     ++ 
Sbjct: 119 EARLRYRYLDLRRPQMNENLQFRAKVASAVRRFLDDNGFLDIETPMLTRATPEGARDYLV 178

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ +G ++ +     +R+ +     QPEFT +
Sbjct: 179 PSRTHKGRFFALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQI 232

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S EQ+M+    + R   +                  +   +T  EA  R+   
Sbjct: 233 DIETSFMSAEQVMEVTETMTRQLFQQLLD----------IDLGKFPTMTWHEAMRRF-GS 281

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D   L    +        +D    +
Sbjct: 282 DKPDLRNPLELVDVADLLKDVEFKVFSGPANDEKGRV 318



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 50/147 (34%), Gaps = 7/147 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT--K 260
           + G               +     E +       +   + AP +       A+P      
Sbjct: 413 KLGETFELVSDEWRPLWVVDFPMFEEDDDGRLAAMHHPFTAPVNVTPEELKANPAQALSN 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            +++    +E+      + D   Q+  FE           E        L  L    P  
Sbjct: 473 AYDMVLNGVEVGGGSVRIHDNAMQQAAFEVLGI----GAEEAKEKFGFLLEALKYGTPPH 528

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
           +G+A G DRLVML+ GA++I +VI  P
Sbjct: 529 AGLAFGLDRLVMLMVGASSIRDVIAFP 555


>gi|109947388|ref|YP_664616.1| aspartyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|122973325|sp|Q17XK9|SYD_HELAH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|109714609|emb|CAJ99617.1| aspS [Helicobacter acinonychis str. Sheeba]
          Length = 584

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 47/350 (13%), Positives = 99/350 (28%), Gaps = 30/350 (8%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFI--------EIDSMSLQYSPGNETHIR 60
           + + D    R+P       I + +  +  EN  +        EI        P       
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDENDVMGVVEDLLREIFKAIGHTIP------T 265

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
            F     +        Y    P+   +  L    +     +++  +             L
Sbjct: 266 PFK---RMPYKEAMENYGSDKPDLRFELPLVEVGDCFMDSSNSIFSNIAKDSKNKRIKAL 322

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYAN 179
               A  ++ + +   +                 +      P  +       +      N
Sbjct: 323 NVKGADATFSRSVLKELEEFVHQFGAQGLAYLQIKEYEIKGPLVKFLSEKGLKNILERTN 382

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTI 237
             +G  +      D+ ++     +  ++VA   D    + ++ + +              
Sbjct: 383 AQVGDIV-FFGAGDKKIVLDYMGRLRLKVAEMLDLIDKNAWNFLWVVNFPMFEKTENGYH 441

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
              +P            +      +++    +EL      +     Q+  FE+       
Sbjct: 442 AAHHPFTMPKNIECEDIEEIEAYAYDVVLNGVELGGGSIRIHKEEMQKKVFERINI---- 497

Query: 298 IYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +E        L  L    P   G A+GFDRL+ML+T +N+I +VI  P
Sbjct: 498 HEDEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTQSNSIRDVIAFP 547



 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 67/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    +++R   +     I +            + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLREIFKAIGHTIPT----------PFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLVEVGDCFMDSSNSIFSNIAKDSKNKRI 319


>gi|302879663|ref|YP_003848227.1| aspartyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582452|gb|ADL56463.1| aspartyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 598

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R  +  + R +     FI+I++  L   +P     ++            
Sbjct: 131 RRPQMQKNLMLRYKVTRAFRNFLDSRGFIDIETPMLTKSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQVDIETSFLNETQ 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   + A               +    +  +EA AR+ +      +     
Sbjct: 245 ITALTEELIRTVFKEALAVDLP---------NPFPRMPYSEAMARFGSDKPDLRVTLELT 295

Query: 192 PDRHLLYLQAQQ 203
               ++   A +
Sbjct: 296 EVTDVMKDVAFK 307



 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G    +      +    + E  E     N C      P  E         
Sbjct: 411 ALRCKIGHEKGHVNGNAWEPLWVVDFPMFEYDEEGKRWNACHHPFTAPKDEHLALLESDP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K ++L     EL      +     Q   F            E        L  L 
Sbjct: 471 GKCLAKAYDLALNGSELGGGSVRIHKAEVQSQVFRALNI----GDEEAQLKFGFLLDALQ 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DR+V ++TG+ +I +VI  P
Sbjct: 527 YGAPPHGGLAFGLDRIVTMMTGSESIRDVIAFP 559


>gi|67525231|ref|XP_660677.1| hypothetical protein AN3073.2 [Aspergillus nidulans FGSC A4]
 gi|40744468|gb|EAA63644.1| hypothetical protein AN3073.2 [Aspergillus nidulans FGSC A4]
          Length = 530

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 63/384 (16%), Positives = 99/384 (25%), Gaps = 52/384 (13%)

Query: 15  HYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS---PGNETHIR-AF 62
           H R R  L       R+     L   F       F+++    +  S      ET      
Sbjct: 141 HLRFRTPLNALLARFRSECLYQLGNVFRGAPNGGFVQVHPPVITSSDCEGAGETFAVIPR 200

Query: 63  ST-----ELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQP 115
            T          DH  R P YL  S +   +   AA    ++  +  +R  +     H  
Sbjct: 201 ETLIKGLPKEEHDHFFRAPKYLNVSSQLHLEAY-AAELGNVWTLSPMFRAEKSDTPRHLS 259

Query: 116 EFTMLEWYRAH-ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA- 173
           EF MLE         + L      ++R           + + ++      PE     E  
Sbjct: 260 EFYMLEAEVNFLSDLDALTDTVEYLLRDLTRRLYDTPAAQEILSIKRDKGPETQDSGEQI 319

Query: 174 --FARYANIDLGTTLDNPDQPDRHLLYLQAQQAG-IRVAHDDTWSDIFSRILIEKIEPNL 230
               R+A++  G+        D      +A   G        TW+        + I   L
Sbjct: 320 DLHQRWADLMSGSKWRCITYSDAIAALQEAVSQGKAAFEFSPTWTGGLQLEHEQYIVNTL 379

Query: 231 GINCCTILDRYPAPESALAN--------IYPADPRFTKRFELYACNIELCNACDELLDPI 282
                  +  YP                             L     E+           
Sbjct: 380 NNGQPIFVTDYPKVIKPFYMAPSHTQSNPKAEGETVACFDLLLPEVSEVAGGSLREHRLP 439

Query: 283 EQRHRFEKEMQEK--------KKIYNETYPID----EDF-----LACLT--EMPQSSGIA 323
           E      +    K        +    E         ED       A L         G  
Sbjct: 440 ELIQNMREHNLIKTSPSNSEEEANQGEAPYPHLLPGEDLSHLQWYADLRRWGSAPHGGFG 499

Query: 324 MGFDRLVMLVTGANNINEVIWTPF 347
           +GFDR +  +TG  +I + +  P 
Sbjct: 500 LGFDRFLGYLTGVQSIRDTVAFPR 523


>gi|22126144|ref|NP_669567.1| aspartyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|51596362|ref|YP_070553.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108807431|ref|YP_651347.1| aspartyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108811693|ref|YP_647460.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145598364|ref|YP_001162440.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149366018|ref|ZP_01888053.1| aspartyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153949743|ref|YP_001401008.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162420653|ref|YP_001606848.1| aspartyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165926395|ref|ZP_02222227.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938888|ref|ZP_02227442.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166009225|ref|ZP_02230123.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210912|ref|ZP_02236947.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401503|ref|ZP_02307000.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420320|ref|ZP_02312073.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167424399|ref|ZP_02316152.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470433|ref|ZP_02335137.1| aspartyl-tRNA synthetase [Yersinia pestis FV-1]
 gi|186895403|ref|YP_001872515.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218929160|ref|YP_002347035.1| aspartyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229894767|ref|ZP_04509947.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229897469|ref|ZP_04512625.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229898116|ref|ZP_04513265.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901975|ref|ZP_04517096.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270490841|ref|ZP_06207915.1| aspartate--tRNA ligase [Yersinia pestis KIM D27]
 gi|294503881|ref|YP_003567943.1| aspartyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|24212411|sp|Q8ZEV0|SYD_YERPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287545|sp|Q66AU4|SYD_YERPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|122979648|sp|Q1C820|SYD_YERPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123246529|sp|Q1CJH0|SYD_YERPN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166200153|sp|A4TJK5|SYD_YERPP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166979995|sp|A7FID0|SYD_YERP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238687248|sp|A9QYX8|SYD_YERPG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238691369|sp|B2K319|SYD_YERPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21959105|gb|AAM85818.1|AE013828_9 aspartate tRNA synthetase [Yersinia pestis KIM 10]
 gi|51589644|emb|CAH21274.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108775341|gb|ABG17860.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108779344|gb|ABG13402.1| aspartyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115347771|emb|CAL20688.1| aspartyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145210060|gb|ABP39467.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149292431|gb|EDM42505.1| aspartyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152961238|gb|ABS48699.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162353468|gb|ABX87416.1| aspartyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165913251|gb|EDR31874.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921616|gb|EDR38813.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991780|gb|EDR44081.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166208092|gb|EDR52572.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962015|gb|EDR58036.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049199|gb|EDR60607.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056281|gb|EDR66050.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|186698429|gb|ACC89058.1| aspartyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229680871|gb|EEO76966.1| aspartyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229688832|gb|EEO80899.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693806|gb|EEO83855.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229702240|gb|EEO90259.1| aspartyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262362000|gb|ACY58721.1| aspartyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262365863|gb|ACY62420.1| aspartyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270339345|gb|EFA50122.1| aspartate--tRNA ligase [Yersinia pestis KIM D27]
 gi|294354340|gb|ADE64681.1| aspartyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320015269|gb|ADV98840.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 598

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKSRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMSADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGVDLGDFPVMTFAEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVASLVKDVEFKVFSGPANDAKGRV 318



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 42/125 (33%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLTAMHHPFTAPKDMSPEQLAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQTVF 500

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E E +EK              L  L    P  +G+A G DRLVML+TG +NI +
Sbjct: 501 GILGITEDEQREKFG----------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRD 550

Query: 342 VIWTP 346
           VI  P
Sbjct: 551 VIAFP 555


>gi|254496361|ref|ZP_05109245.1| aspartyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354415|gb|EET13066.1| aspartyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 546

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 78/228 (34%), Gaps = 29/228 (12%)

Query: 4   IPSQPWW-NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
           +P      N D  Y+ R            L  R+ + S +R Y  +  F++I++  L   
Sbjct: 64  LPDDFQTVNEDLRYKYRYIDLRRPSMQSKLRLRHKLNSCIRNYLNQQDFVDIETPMLTKA 123

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G +K +     +R+ +  
Sbjct: 124 TPEGARDYLVPSRVHPGEFYALPQ------SPQLFKQLLMMSGFDKYYQIVRCFRDEDLR 177

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT L+   A    E ++     +++               +N     +   +  
Sbjct: 178 ADRQPEFTQLDIEMAFIDEENILNLIEGLLKKIFSEL---------MNVTLPEKLPRMAY 228

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
           AEA  R+   D     +  +  D   L  +        A +D  S + 
Sbjct: 229 AEAMRRF-GSDKPDMRNPLELIDVADLVKECDFKVFSTAANDDESRVV 275



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 47/142 (33%), Gaps = 5/142 (3%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
                  I    + E  + N  +         P   SA A          K +++     
Sbjct: 378 EGWELLWIVDWPMFEMDQQNNRLQAMHHPFTSPKQLSADALCANPTHTLAKAYDIVINGY 437

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDR 328
           E+      +     Q+  F    +       E        L  L    P   GIA+G DR
Sbjct: 438 EIGGGSIRIHQSDLQKAVF----KLLGINEQEAQEKFGFLLDALQYGAPPHGGIALGIDR 493

Query: 329 LVMLVTGANNINEVIWTPFSQS 350
           L ML+T + ++ +VI  P +Q+
Sbjct: 494 LAMLLTDSTSLRDVIAFPKTQT 515


>gi|77163835|ref|YP_342360.1| aspartyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254435850|ref|ZP_05049357.1| aspartyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|97196746|sp|Q3JEB6|SYD_NITOC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|76882149|gb|ABA56830.1| aspartyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207088961|gb|EDZ66233.1| aspartyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 595

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 49/144 (34%), Gaps = 5/144 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           V H  +   +    + E  E +   +        P  E             ++ ++L   
Sbjct: 424 VEHGWSPLWVIDFPMFEWDEDDHRWHALHHPFTSPKEEDLSLLEQNPGACRSRAYDLVLN 483

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +     Q   F    +       E        L  L    P   GIA G 
Sbjct: 484 GTEVGGGSIRISQSQVQSQVF----RLLGIGDEEAQDKFGFLLDALKYGCPPHGGIAFGL 539

Query: 327 DRLVMLVTGANNINEVIWTPFSQS 350
           DRLVML+TG+ +I EVI  P +Q+
Sbjct: 540 DRLVMLMTGSASIREVIPFPKTQT 563



 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 61/177 (34%), Gaps = 25/177 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRA 61
           D   R R            L  R+ I   LR++  E  F++ID+  L Q +P      R 
Sbjct: 122 DIRLRYRYIDLRRPESLQRLRFRSAIIRQLRKFLDERGFLDIDTPILTQSTPEG---ARD 178

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F           +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT L+
Sbjct: 179 FLVPSRTH--PGQFFALPQSPQLFKQLLMVAGVDRYYQVVRCFRDEDLRADRQPEFTQLD 236

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
              +    E LM     + +                     +    +  AEA A + 
Sbjct: 237 IEASFLHEETLMALMEEMFKELFATVL---------EVPLHTPFVRMPYAEALACFG 284


>gi|294501364|ref|YP_003565064.1| aspartyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351301|gb|ADE71630.1| aspartyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 592

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 70/191 (36%), Gaps = 21/191 (10%)

Query: 16  YRRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR         RN I  ++R++  +N F+++++  L   +P     ++           
Sbjct: 134 LRRSEMFNTLKMRNDITKTIRDFLDQNDFLDVETPILTKSTPEGARDYLVPSRVHEGEFY 193

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++   +  S E
Sbjct: 194 ALPQ------SPQIFKQLLMVSGVERYYQIARCFRDEDLRADRQPEFTQIDIETSFLSQE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M     ++    +       +         +    ++  EA +RY   D   T    +
Sbjct: 248 DIMTMTEEMMSKVMKRVKDLDVT---------TPFPRMSYDEAMSRY-GSDKPDTRFEME 297

Query: 191 QPDRHLLYLQA 201
             +   L    
Sbjct: 298 LVNLSELVKDC 308



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 49/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ GI       +  +    L+E  E +            P  E         
Sbjct: 409 ALRLKLAKEQGIIDETKFNFLWVTDWPLLEHDEEDNRYYAAHHPFTMPVREDLPMLESDP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L     EL      + +   Q   F+      +    E Y      L    
Sbjct: 469 GQVRAQAYDLVLNGYELGGGSLRIYERDIQEKMFKTLGFTLE----EAYEQFGFLLEAFE 524

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 525 YGTPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 557


>gi|45441698|ref|NP_993237.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|45436560|gb|AAS62114.1| aspartyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
          Length = 598

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKSRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMSADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGVDLGDFPVMTFAEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVASLVKDVEFKVFSGPANDAKGRV 318



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 42/125 (33%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLTAMHHPFTAPKDMSPEQLAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQTVF 500

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E E +EK              L  L    P  +G+A G DRLVML+TG +NI +
Sbjct: 501 GILGITEDEQREKFG----------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRD 550

Query: 342 VIWTP 346
           VI  P
Sbjct: 551 VIAFP 555


>gi|292488543|ref|YP_003531427.1| aspartyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899718|ref|YP_003539087.1| aspartyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199566|emb|CBJ46683.1| aspartyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553974|emb|CBA21019.1| Aspartyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 595

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +  F++I++  L   +P     ++            
Sbjct: 130 RRPDMANRLKARAKITSFVRRFMDDEGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R                          +T AEA  RY   D     +  + 
Sbjct: 244 VREVMERLVRNLWLDVKSVDLGS----------FPIMTFAEAMRRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLLKDIEFKVFSGPANDAKGRV 318



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S        +      +++     E+      + +   Q+  F
Sbjct: 441 EQGLTAMHHPFTAPKDMSPEQLKNAPESAIANAYDMVINGYEVGGGSVRIHNGQMQQTVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 GILGISEHEQREKFG--------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|71736289|ref|YP_275916.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|97196800|sp|Q48FC1|SYD_PSE14 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71556842|gb|AAZ36053.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 591

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  ++ F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDSGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F +  ++T  EA  RY   
Sbjct: 236 DIETSFLNEEDIIGLTEKMVRQLFKEVLDL----------EFGDFPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D        +        +D    +
Sbjct: 285 DKPDLRNPLELVDVADQLTGVEFKVFSGPANDPKGRV 321



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 50/162 (30%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N              P          
Sbjct: 407 EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFTALHHPFTAPKCTPEELEAN 466

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 467 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 521

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+ GA +I EVI  P +QS  +
Sbjct: 522 LKYGAPPHGGLAFGLDRLVMLMAGAQSIREVIAFPKTQSAAD 563


>gi|148359007|ref|YP_001250214.1| hypothetical protein LPC_0892 [Legionella pneumophila str. Corby]
 gi|166225353|sp|A5IBW8|SYD_LEGPC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148280780|gb|ABQ54868.1| hypothetical protein LPC_0892 [Legionella pneumophila str. Corby]
          Length = 593

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 5/144 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           +        +    + E    +  +         P   SA A          K +++   
Sbjct: 423 INSGWQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTLAKAYDIVIN 482

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +  P  Q+  F+           E +      L  L    P   GIA+G 
Sbjct: 483 GYEIGGGSIRIHQPELQKTVFD----LIGIGDQEAHEKFGFLLDALQYGAPPHGGIALGI 538

Query: 327 DRLVMLVTGANNINEVIWTPFSQS 350
           DRL ML+T + +I +VI  P +Q+
Sbjct: 539 DRLAMLLTDSTSIRDVIAFPKTQT 562



 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 80/228 (35%), Gaps = 29/228 (12%)

Query: 4   IPSQPWW-NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
           +P      N D  Y+ R            L  R+ + S +R Y  E  F++I++  L   
Sbjct: 111 LPDDHQIINEDLRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKA 170

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G +K +     +R+ +  
Sbjct: 171 TPEGARDYLVPSRVHPGQFYALPQ------SPQLFKQLLMMSGFDKYYQIVRCFRDEDLR 224

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT L+   A  + E +++    ++         KI   + +N     +   ++ 
Sbjct: 225 ADRQPEFTQLDIEMAFINEEDILQLIEGLL---------KIVFKEILNITLPDKLPRMSY 275

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            EA  RY   D     +  +  D   L           A +D    + 
Sbjct: 276 KEAMTRY-GSDKPDLRNPLELIDIADLVKDCDFNVFSSAANDNSGRVV 322


>gi|303238650|ref|ZP_07325183.1| aspartyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593769|gb|EFL63484.1| aspartyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 594

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 78/217 (35%), Gaps = 10/217 (4%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +        +  L+ R+ +    R+Y+ EN F+EI++  L   +P     ++     
Sbjct: 134 KHRYLDLRRPDMQRNLILRHKVAKIARDYYDENGFLEIETPMLTKSTPEGARDYLVPSRV 193

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+ +G ++       +R+ +     QPEFT ++   
Sbjct: 194 HPGKFFALPQ------SPQLFKQLLMVSGFDRYIQIVKCFRDEDLRADRQPEFTQIDLEM 247

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +  + E +++     I+   + A         +        +     +   R+  ++L  
Sbjct: 248 SFVNVEDVLQINEGFIKKVFDEALGVKLETPFLRMTYQEAMDRFGSDKPDIRF-GLELIN 306

Query: 185 TLDNPDQPDRHLLYLQAQQAG-IRVAHDDTWSDIFSR 220
             D  +     +     +  G +R  +      IFSR
Sbjct: 307 ISDMVENCGFKVFSDAVKNGGSVRAINAKGCGRIFSR 343



 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +    +  +  +    L+E  E              P  E         
Sbjct: 415 QLRLEIARRTNLIDEKEFKFLWVTEFPLLEYDEEEKRWVAKHHPFTSPMDEDLQYLDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K +++     E+      + D   Q   F      E++  ++     E +     
Sbjct: 475 GKVRAKAYDIVLNGTEIGGGSIRIHDQFLQSKMFSLIGINEEQAADRFGFLLEAFK---- 530

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                   P   G+A G DRLVM++ G ++I +VI  P  Q+  +
Sbjct: 531 -----YGTPPHGGLAFGLDRLVMIMAGKSSIRDVIAFPKVQNASD 570


>gi|16079809|ref|NP_390633.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310693|ref|ZP_03592540.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315017|ref|ZP_03596822.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319938|ref|ZP_03601232.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324219|ref|ZP_03605513.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|3122885|sp|O32038|SYD_BACSU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2635219|emb|CAB14714.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 592

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 72/223 (32%), Gaps = 18/223 (8%)

Query: 11  NRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFS 63
            +  +   RRP     +  R+ +  ++R +  EN F++I++  L   +P     ++    
Sbjct: 128 LKHRYLDLRRPAMFQTMQLRHNVTKAVRSFLDENGFLDIETPILTGSTPEGARDYLVPSR 187

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                   + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++  
Sbjct: 188 VHEGEFYALPQ------SPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQPEFTQIDIE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  S E +M     ++         +                     +   R+  +   
Sbjct: 242 MSFMSQEDIMSLAEEMMAKVMRETKGEELQLPLPRMTYDEAMNKYGSDKPDTRFDMLLTD 301

Query: 184 TTLDNPDQPDRHLLYLQA-----QQAGIRVAHDDTWSDIFSRI 221
            +    D   +      A     +   ++    D        +
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGGAGDYSRKDIDAL 344



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 49/168 (29%), Gaps = 11/168 (6%)

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCTILDRYPA 243
           L   DQ +     L A +  +          +F+ +      +  +           +P 
Sbjct: 395 LFGADQFEVVAASLGALRLKLGKERGLIDEKLFNFLWVIDWPLLEHDPEEGRFYAAHHPF 454

Query: 244 PESALAN----IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                 +        +    + ++L     EL      + +   Q   F           
Sbjct: 455 TMPVREDLELIETAPEDMKAQAYDLVLNGYELGGGSIRIFEKDIQEKMF----ALLGFSP 510

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L       P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 511 EEAAEQFGFLLEAFEYGAPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 558


>gi|303390853|ref|XP_003073657.1| asparagine-tRNA ligase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302804|gb|ADM12297.1| asparagine-tRNA ligase [Encephalitozoon intestinalis ATCC 50506]
          Length = 447

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 110/351 (31%), Gaps = 42/351 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRA 61
           + +     R    +R+ FL  R  +   +R+++   ++ EI   ++      G  T    
Sbjct: 125 LTNAHLALRTK--KRQLFLKARGYLLKIIRDFYFAKEYTEITPPTMVQTQVEGGST---- 178

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L   D+  +  YL  S +   + ++     + +C   ++R  +     H  E+T +
Sbjct: 179 ----LFKLDYYGEDAYLTQSSQLYLETVVP-VSHRAYCIMPSYRAEKSRTRRHLSEYTHV 233

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A   + +LM    ++I  + E                F E     +   + ++   
Sbjct: 234 EAELADIDFSELMSSIESLISYSMEK---------------FYEGMKDDILSLYPKFEFH 278

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
            +  T     +    + +L ++        D    D         I   +G  C   L  
Sbjct: 279 KIPKTPFKKIKYSEAIDFLNSKGYKKEDGTDFEIGDDIPDAAERYIVEAIGDGCPVFLTN 338

Query: 241 YPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           +   +          +  +T+  +L    I          D  E            +   
Sbjct: 339 FLVEQKPFYMRKDKGNKDWTESVDLLFPGIGEILGGSMRQDIYE---------DLIEGFK 389

Query: 300 NETYPID--EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            E   ID    +L        +  G  +GF+R +M +    N++E    P 
Sbjct: 390 REDINIDPYYWYLDMARFGPCKHGGYGLGFERFLMGLMRYENVDEATLYPR 440


>gi|300113111|ref|YP_003759686.1| aspartyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539048|gb|ADJ27365.1| aspartyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 595

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 49/144 (34%), Gaps = 5/144 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           V H  +   I    + E  E +   +        P  E             ++ ++L   
Sbjct: 424 VEHGWSPLWIIDFPMFEWNEDDDRWHALHHPFTAPKEEDLSLLEQNPGACRSRAYDLVLN 483

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +     Q   F    +       E        L  L    P   GIA G 
Sbjct: 484 GTEVGGGSIRISQAQVQSQVF----RLLGIGDEEAQDKFGFLLDALKYGCPPHGGIAFGL 539

Query: 327 DRLVMLVTGANNINEVIWTPFSQS 350
           DRLVML+TG+ +I EVI  P +Q+
Sbjct: 540 DRLVMLMTGSASIREVIPFPKTQT 563



 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 25/177 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRA 61
           D   R R            L  R+ I   LR++  E  F++ID+  L Q +P      R 
Sbjct: 122 DIRLRYRYIDLRRPESLQRLRLRSAIIRQLRKFLDERGFLDIDTPILTQSTPEG---ARD 178

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F           +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT L+
Sbjct: 179 FLVPSRTH--PGQFFALPQSPQLFKQLLMVAGVDRYYQVVRCFRDEDLRADRQPEFTQLD 236

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
              +    E LM     + +       +             +    +  AEA A + 
Sbjct: 237 IEASFLHEEALMALMEEMFKELFATVLETPL---------HTPFIRMPYAEALACFG 284


>gi|51893559|ref|YP_076250.1| aspartyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|62287548|sp|Q67LP0|SYD_SYMTH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|51857248|dbj|BAD41406.1| aspartyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 593

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +  ++R++F E+ F+EI++  L   +P     ++            
Sbjct: 135 RRPEMQRNLILRHRVTKAVRDFFDEHGFLEIETPMLTKSTPEGARDYLVPSRVNPGKFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   +  + +G E+       +R+ +     QPEFT ++   +    + 
Sbjct: 195 LPQ------SPQIFKQLCMVSGLERYVQIVRCFRDEDLRADRQPEFTQIDVEMSFVERDD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++      A               +  + +T AEA ARY   D        + 
Sbjct: 249 VLSMMEQMVARVFRDALGVEVP---------TPFKRLTYAEAMARY-GSDKPDLRFGMEL 298

Query: 192 PD 193
            D
Sbjct: 299 VD 300



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 57/194 (29%), Gaps = 27/194 (13%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQA------QQAGIRVAHDDTWSDIFSRILIE 224
           AE   R         L   DQPD     L A       + G+R   +     +    L+E
Sbjct: 379 AEIVRRLEGEPGDLLLFVADQPDVVAAALGALRVEMGNRLGLRKPGEFNLLWVIDFPLLE 438

Query: 225 KIEPNLGINCCTILDR--YPAPESALAN----IYPADPRFTKRFELYACNIELCNACDEL 278
             E               +P     +                 ++L    +EL      +
Sbjct: 439 WDEEENRFVAVHHPFTSPHPEDLDKVFKEGATREELAAIRANAYDLVLNGVELGGGSIRI 498

Query: 279 LDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVML 332
                Q   FE      +E Q K     E +             P   GIA G DR VML
Sbjct: 499 HQRPLQNRMFELLGFTPEEAQAKFGFLLEAFE---------YGAPPHGGIAFGLDRFVML 549

Query: 333 VTGANNINEVIWTP 346
           + G  +I +VI  P
Sbjct: 550 LAGRQSIRDVIAFP 563


>gi|188996098|ref|YP_001930349.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229559940|sp|B2V713|SYD_SULSY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188931165|gb|ACD65795.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 602

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 79/200 (39%), Gaps = 21/200 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  ++ R+ +  ++RE+   N FIE+++  L   +P      R F     ++   
Sbjct: 142 RRPSMQRNIILRHEVYQAVREFLAGNGFIEVETPMLTKSTPEG---ARDFLVPSRLE--- 195

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ AG E+ F  A  +R+ +     QPEFT ++   +  + + 
Sbjct: 196 KGKFYALPQSPQLFKQILMVAGLERYFQIAKCFRDEDLRADRQPEFTQIDLEMSFVTEDD 255

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    ++I+   +              +       ++  EA  +Y   D        + 
Sbjct: 256 VMTLAESLIQYVYKKVLG---------IDIKIPFRRMSYEEAINKY-GTDKPDLRYGLEL 305

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            D   +   A++   +V +D
Sbjct: 306 ID---ITDLAKEVEFKVFND 322



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 19/158 (12%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE------SALANIYP 253
            A++  +       +  +    L E  E    +         P  E       AL +   
Sbjct: 420 IAEKMNLIDNSKLEFLWVVDFPLFEWDEEENRLVAIHHPFTSPKDEDIDRLDEALNSPEI 479

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDF 309
           A    +K +++     E+      +  P  Q   F+     E + K+K            
Sbjct: 480 ALSFKSKAYDMVLNGEEIGGGSIRIHTPYIQEKVFQLLNISEEEAKEKFG--------FL 531

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +  L    P   G+A G DR++ L+TG+ +I +VI  P
Sbjct: 532 IEALSYGAPPHGGLAFGLDRILALMTGSESIRDVIAFP 569


>gi|327540384|gb|EGF26970.1| Aspartyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 568

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 71/182 (39%), Gaps = 22/182 (12%)

Query: 4   IPSQPWWNRDFHY--RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET 57
           +P +    +      RR+     L++R+ I   +R+YF E+ FI++++  L   +P    
Sbjct: 96  LPGEDLRLKYRFLDLRRKEMQQALIRRSEIIKCMRDYFAEHDFIDVETPILGRSTPEGAR 155

Query: 58  -HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            ++            + +      SP+   + L+ AG ++    A  +R+ +     QPE
Sbjct: 156 DYLVPSRVHPSNFYALPQ------SPQLYKQILMVAGFDRYVQVAKCFRDEDLRADRQPE 209

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT L+   +    E ++     ++   A+    K  +              +T  EA  R
Sbjct: 210 FTQLDLEMSFVDSEDIIGLIDGLVAKTAKQVLGKDIT---------LPLPRMTYEEAMRR 260

Query: 177 YA 178
           + 
Sbjct: 261 FG 262



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 50/161 (31%), Gaps = 9/161 (5%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A +  +    +   S +    + EK E              P  E         +
Sbjct: 388 LRKRLAVELKLYEDGELNCSWVTEFPMFEKDEEAGRYVAMHHPFTAPLEEDLPLLKESPE 447

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL 313
               + ++L     E       + D   Q   FE          +E    D     L  L
Sbjct: 448 KCRAQAYDLVINGSEAGGGTIRIHDSKVQSQVFE------LLGMDEETARDRFGFLLDAL 501

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   GIA+G DR VML  G  NI EVI  P +Q   +
Sbjct: 502 RFGAPPHGGIALGVDRWVMLFAGLENIREVIAFPKTQKAAD 542


>gi|308187177|ref|YP_003931308.1| Aspartyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308057687|gb|ADO09859.1| Aspartyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 592

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 74/227 (32%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S    + +   + R            L  R  I S +R +  +  F++I++  L   
Sbjct: 109 PLDSNQTNSEEARLKYRYLDLRRPEMVTRLKTRAKITSFVRRFMDDEGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+      +IR   +                  E   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVRDIMERLIRNLWQDVQGVDLG----------EFPQMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    +        +D    +
Sbjct: 273 AEAMHRY-GSDKPDLRNPMELVDVGDLLKSVEFQVFSGPANDEKGRV 318



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 14/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  I          +    + E+ E   G+         P   SA       
Sbjct: 408 ALRLKVGRELNITDEKAWAPLWVIDFPMFEEDEE-GGLAAMHHPFTAPKEMSADELAADP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFL 310
                  +++     E+      + +   Q+  F     +E ++++K            L
Sbjct: 467 TRAVANAYDMVINGYEVGGGSVRIHNGKMQQTVFSILGIEEHEQREKFG--------FLL 518

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 519 DALKFGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|261839556|gb|ACX99321.1| aspartyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 577

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 395 DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGCHAAHHPFTMPKNIE 454

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 455 CEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQKKFGFLL 510

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +N+I +VI  P
Sbjct: 511 EALKFGAPPHGGFAIGFDRLIMLMTKSNSIRDVIAFP 547



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 66/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAKKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S   +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCSENDVMGVVEDLLQEIFKAIGHD----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFRDSSNAIFSNIAQDPKNKRI 319


>gi|238754857|ref|ZP_04616207.1| Aspartyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706868|gb|EEP99235.1| Aspartyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 598

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMERMVRQL----------WQTTKGVDLGDFPIMTFAEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVRDVEFKVFAGPANDPNGRV 318



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 13/121 (10%)

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF-- 288
           G+         P   S               +++     E+      +     Q+  F  
Sbjct: 443 GLTAMHHPFTAPKDMSPEELAANPTSAIANAYDMVINGYEVGGGSVRIHRTEMQQQVFGI 502

Query: 289 --EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI  
Sbjct: 503 LGINEHEQREKFG--------FLLDALKYGTPPHAGLAFGLDRLVMLLTGTDNIRDVIAF 554

Query: 346 P 346
           P
Sbjct: 555 P 555


>gi|30689804|ref|NP_195102.2| tRNA synthetase class II (D, K and N) family protein [Arabidopsis
           thaliana]
 gi|332660874|gb|AEE86274.1| aspartyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 664

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 19/183 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              + +  ++ R+ +   +R Y  +   FIEI++  L   +P     ++     +     
Sbjct: 211 RRQQMKNNIVLRHNVVKLIRRYLEDRHGFIEIETPILSRSTPEGARDYLVPSRIQSGTFY 270

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +  A  +R+ +     QPEFT L+   A    E
Sbjct: 271 ALPQ------SPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQPEFTQLDMEMAFMPME 324

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++K   ++IR                          +T A+A  RY   D   T  + +
Sbjct: 325 DMLKLNEDLIRKVFSEIKG---------IQLPDPFPRLTYADAMDRY-GSDRPDTRFDLE 374

Query: 191 QPD 193
             D
Sbjct: 375 LKD 377



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 16/142 (11%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           D +   I         E N        L  +P       ++          +++    +E
Sbjct: 504 DHSKHSILWVTDFPMFEWNEPEQRLEAL-HHPFTAPKPEDMDDLPSARALAYDMVYNGVE 562

Query: 271 LCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAM 324
           +      +     Q    E      +E + K     E   +           P   GIA 
Sbjct: 563 IGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDM---------GAPPHGGIAY 613

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           G DR+VM++ GA++I +VI  P
Sbjct: 614 GLDRMVMMLGGASSIRDVIAFP 635


>gi|224056291|ref|XP_002298795.1| predicted protein [Populus trichocarpa]
 gi|222846053|gb|EEE83600.1| predicted protein [Populus trichocarpa]
          Length = 667

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 22/184 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQ 69
            RR+     ++ R+ +   +R Y  +   F+EI++  L   +P     ++     +    
Sbjct: 213 LRRQQMSSNIMLRHRVVKLIRRYLEDVQGFVEIETPILSRSTPEGARDYLVPSRIQPGTF 272

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
             + +      SP+   + L+ +G +K +  A  +R+ +     QPEFT L+   A    
Sbjct: 273 YALPQ------SPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQPEFTQLDMELAFTPM 326

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E +++   ++IR                     +    +T AEA +RY   D   T  + 
Sbjct: 327 EDMLRLNEDLIRKVFLEIKGVQLP---------NPFPRLTYAEAMSRY-GSDRPDTRFDL 376

Query: 190 DQPD 193
              D
Sbjct: 377 HLKD 380



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 19/153 (12%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A Q G+      +   +    + E  E    +        +P       ++        
Sbjct: 499 IANQLGLNDPSRYSILWVTDFPMFEWNETEQRLEAL----HHPFTAPNPEDMKDLSSARA 554

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL 313
             +++    +E+      +     Q+   E      ++ + K     E   +        
Sbjct: 555 LAYDMVYNGVEIGGGSLRIYKREIQQKVLEIVGITPEQAEAKFGYLLEALDM-------- 606

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DRL ML+ GAN+I +VI  P
Sbjct: 607 -GAPPHGGIAYGLDRLAMLLAGANSIRDVIAFP 638


>gi|207092253|ref|ZP_03240040.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 577

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 96/344 (27%), Gaps = 18/344 (5%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  EN  + +    LQ        T    F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDENDVMGVVEDLLQEIFKAIGHTISTPFK--- 268

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
            +        Y    P+   +  L    +     ++A  +             L    A 
Sbjct: 269 RMPYKEAMENYGSDKPDLRFELPLIEVGDCFIDSSNAIFSNIAQDPKNKRIKALNVKGAD 328

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANIDLGTT 185
             + +     +                 +      P  +       +      N  +G  
Sbjct: 329 ALFSRSTLKELEEFVRQFGAQGLAYLQIKEDEIKGPLVKFLSEKGLKNILERTNAQVGDI 388

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           +      D+ ++     +  ++VA   D    D  + + +                 +P 
Sbjct: 389 V-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPF 447

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                      +      +++    +EL      +     Q+  FEK          E  
Sbjct: 448 TMPKNIECEDMEEVEAHAYDVVLNGVELGGGSIRIHKEKMQKKVFEKINI----NEEEAQ 503

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 L  L    P   G A+GFDRL+ML+T +N+I +VI  P
Sbjct: 504 KKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSNSIRDVIAFP 547



 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 62/194 (31%), Gaps = 28/194 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +     I +            + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQEIFKAIGHTIST----------PFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQP 192
           +       + P   
Sbjct: 281 SDKPDLRFELPLIE 294


>gi|149199233|ref|ZP_01876271.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149137658|gb|EDM26073.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 591

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 68/215 (31%), Gaps = 21/215 (9%)

Query: 2   HQIP---SQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P        N +   R R            ++ R+ I  +LR+YF +  F+EI++  
Sbjct: 108 RPMPFNLDDDKVNEEMRLRYRYLDFRRPALTEKMVLRHRITKTLRDYFDDQNFLEIETPI 167

Query: 49  LQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
           L   +P     ++            + +      +P+   + L+  G E+ F  A  +R+
Sbjct: 168 LSKSTPEGARDYLVPSRVHPGQFYALPQ------APQQYKQLLMVGGLERYFQIARCFRD 221

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
            +     QPEFT ++   +    E +      ++    +              + F    
Sbjct: 222 EDLRADRQPEFTQVDLEMSFIDEEDIYSLLEGLMSRIMKEVKGIDIPTPFQRLDYFEAMT 281

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
                +   R+    +       +   +      A
Sbjct: 282 RFGSDKPDTRFGMELINLEPALKNSEFKVFADTLA 316



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A+Q  +       +  +    L+ + E     +        P                 
Sbjct: 413 IAKQTDMIPEDQWNYLWVTDFPLLVQDEETQDWHAMHHPFTAPHESDRDKMQSDRGSIRA 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           + ++L     EL      + D   Q   F+     ++    E        L  L    P 
Sbjct: 473 RAYDLVLNGCELGGGSIRIHDTQLQSEMFDALGISQE----EAQHQFGHILDALAFGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A+G DR+VML+TGA+++ EVI  P
Sbjct: 529 HGGLALGLDRMVMLLTGASSLREVIPFP 556


>gi|317180387|dbj|BAJ58173.1| aspartyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 577

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 46/348 (13%), Positives = 93/348 (26%), Gaps = 26/348 (7%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  E+  + +    LQ        T  + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDEDDVMGVVEDLLQEIFKAIGHTISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSP----EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
            +        Y    P    E    ++     +             +          L  
Sbjct: 269 RMPYKEAMENYGSDKPDLRFELPLIEVGDCFMDSSNAIFSNIAQDPKNKR----IKALNV 324

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANID 181
             A   + + +   +                 +      P  +       +         
Sbjct: 325 KGADALFSRSVLKELEEFVRQFGAKGLAYLQIKEDGIKGPLVKFLSEKGLKNILEKTGAK 384

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILD 239
            G  +      D+ ++     +  ++VA   D    D  + + +                
Sbjct: 385 TGDIV-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAA 443

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P            +      +++    +EL      +     Q+  FEK         
Sbjct: 444 HHPFTMPKNIECEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----NE 499

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L  L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 500 EEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 66/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +    + +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDEDDVMGVVEDLLQEIFKAIGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNAIFSNIAQDPKNKRI 319


>gi|290475153|ref|YP_003468039.1| putative Lysine--tRNA ligase [Xenorhabdus bovienii SS-2004]
 gi|289174472|emb|CBJ81266.1| putative Lysine--tRNA ligase [Xenorhabdus bovienii SS-2004]
          Length = 295

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 59/328 (17%), Positives = 118/328 (35%), Gaps = 49/328 (14%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
             +   +R +    +FIEI +  ++   G           L + +      +L+ S  F+
Sbjct: 10  AAMIRRIRTFLDSQKFIEIMTPVMRRYSG-----DDSRPRLSLHNGG----WLRESSAFA 60

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
             +      ++I+    ++R       H PEFTML+ Y+   + +++++   +II     
Sbjct: 61  L-RYNLQFYDRIYEIGPSFRPDTVDDTHLPEFTMLDLYKKDSTLDEMLQLAQSII----- 114

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                             +   ++ ++   +   +D       P+     L  +   +  
Sbjct: 115 ------------EIFYQGKISVLSFSDHLKQRFLVDFFEDCSAPEIFIDCLREMYCDKKT 162

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
             +        +  R +IE IEP L   CC I+  +P      A          +RFE+ 
Sbjct: 163 PPLN-------LIDRYIIENIEP-LSQQCCIIVTDFPLLTEIRAKKRTGTKGIVERFEIL 214

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE---MPQSSGI 322
              IE+ +   +  D      RFE + +++    +E    DE     +      P S+G 
Sbjct: 215 IDGIEIVHGYTDEDDV----ERFETQARKRNMFGSE----DEVMCTMMRNKLVSPSSAGF 266

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQS 350
           A+G +RL  +  G   I+       S+ 
Sbjct: 267 AIGIERLCQVALGEKQIS---AFATSRP 291


>gi|258645315|ref|ZP_05732784.1| aspartate--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402664|gb|EEW96211.1| aspartate--tRNA ligase [Dialister invisus DSM 15470]
          Length = 600

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 69/188 (36%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ I   +R++   + F+E+++  L   +P     ++            
Sbjct: 140 RRPEMQRNLIMRHKIVHEMRQFLDAHDFLEVETPILTKSTPEGARDYLVPSRVNPGKFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ F  A  +R+ +     QPEFT L+   + E  + 
Sbjct: 200 LPQ------SPQLFKQLLMVSGLERYFQIARCFRDEDLRADRQPEFTQLDIELSFEDQDF 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++    ++++               +N +     + IT  +A   Y +       D    
Sbjct: 254 ILDLMEHMMQ---------RIFKNVLNVDIQIPFKRITWDDAMNLYGSDKPDLRFDMHFY 304

Query: 192 PDRHLLYL 199
               LL  
Sbjct: 305 DISDLLRD 312



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 9/164 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +   ++  +  +    + E  E +            P  E     +   
Sbjct: 414 ELRLEMARRMNLIDENEFCFRWVTDFPMFEYSEEDKRWVAEHHPFTAPRDEDVQYLLTDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
              + K +++    +E       +     Q   F      K     + E        L  
Sbjct: 474 SKVYAKAYDMVLNGVEAGGGSLRIYQEELQEKVF------KAIGITHEEAQEKFGFLLDA 527

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
                P  +GIA+G DRLVML+    +I +VI  P +QS  +++
Sbjct: 528 FRYGAPPHAGIALGLDRLVMLMLRLGSIRDVIAFPKTQSAIDQM 571


>gi|253574920|ref|ZP_04852260.1| aspartyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251845966|gb|EES73974.1| aspartyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 592

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 72/230 (31%), Gaps = 17/230 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+      R++     FIE+++  L   SP     ++            
Sbjct: 134 RRPEMQQTLWLRSKAAKVFRDFLDGEGFIEVETPILTKSSPEGARDYLVPSRVHPGEFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++   +  S ++
Sbjct: 194 LPQ------SPQLYKQLLMVSGIERYYQIARCFRDEDLRADRQPEFTQVDIETSFLSRDE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L++    +I    +                 +  + I+ A+A  +Y +            
Sbjct: 248 LLEMMEKLIVRLFKETKGIDIP---------TPFQRISYADAMDKYGSDKPDLRFGLELV 298

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L+     +    V        + +             +      RY
Sbjct: 299 NVSDLVANSGVKVFSSVIEKGGEVKVLNAKGCGTWSRKDIDDLGPYAARY 348



 Score = 92.4 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 47/162 (29%), Gaps = 9/162 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+       ++ +    L+   E              P  E         
Sbjct: 407 ALRLKIGRDLGLIDDSVYKFAWVVDFPLLGWDEEQKRYVAEHHPFTRPRDEDLPLFDTDP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                + ++L     E+      +     Q   F      K       E        +  
Sbjct: 467 GKILAQAYDLVLNGYEVGGGSMRIYKRDVQEKMF------KAIGLSPEEAQDKFGYLMDA 520

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                P   GIA GFDRLVML+ G +N+ E I  P + S  +
Sbjct: 521 FEYGTPPHGGIAFGFDRLVMLLAGRSNLRETIAFPKTASATD 562


>gi|254362358|ref|ZP_04978467.1| aspartate--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093947|gb|EDN74863.1| aspartate--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 588

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 67/207 (32%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAEKLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +                  +   +T  EA  R+   D     +  + 
Sbjct: 245 VRALMEAMIHGLWKETLGVDLG----------KFPMMTWNEAMTRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   +             +D    + 
Sbjct: 294 VDVADILKSVDFKVFSGPANDPKGRVV 320



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 54/169 (31%), Gaps = 19/169 (11%)

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE--PNLGINCCTILDRYPAP 244
           DN       +  L+ +        D T       I     E      ++        P  
Sbjct: 398 DNWHVATNAIGALRLKVGNDLGLTDTTAWKPLWVIDFPMFERDDEGNLSAMHHPFTSPKE 457

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKI 298
            S    +   +      +++     E+      +     Q+  F      E+E +EK   
Sbjct: 458 LSPEELVQDPENAVANAYDMVINGYEVGGGSVRIFSQQMQQTVFSILGINEEEQKEKFG- 516

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                      L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 ---------FLLDALKFGTPPHAGLAFGLDRLTMLITGTDNIRDVIAFP 556


>gi|116203221|ref|XP_001227422.1| hypothetical protein CHGG_09495 [Chaetomium globosum CBS 148.51]
 gi|88178013|gb|EAQ85481.1| hypothetical protein CHGG_09495 [Chaetomium globosum CBS 148.51]
          Length = 916

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 101/308 (32%), Gaps = 27/308 (8%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
                 ++ S+ R     + FIEI +  L      E+    F        +  +  +L  
Sbjct: 256 IFRVNAVVCSTFRSILEADNFIEIHTPKLMP-GATESGAEVFRV-----GYFGRTAFLAQ 309

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           SP+   +  ++A   ++F     +R  +     H  E+T ++   A  S  +     ++ 
Sbjct: 310 SPQLCKQMSISADFGRVFEIGPVFRAEDSNTHRHLTEYTGMDLEMAINSDYREAMRVIDK 369

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +  +   A  +    +          + +   E        +    L++    D      
Sbjct: 370 LMKSIFEAVYRRCRKEIDVVKTRFPHDDLVWLEETPILTFKEAVDLLNSSGWTD------ 423

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRF 258
                G + +  +  S      + E ++     +   I+D++PA       ++ P D R 
Sbjct: 424 ---DHGRKASEFEDLSTRAEIRIGELVKEKFKTD-YYIIDKFPASARPFYTHLDPQDDRV 479

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           T  F+++    E+      +  P   + R       KK     +    E+++      + 
Sbjct: 480 TNSFDIFLRGQEITTGGQRIHKPDLLKER------MKKAGIEPSGV--EEYMQGFEFGVL 531

Query: 318 QSSGIAMG 325
             +G  +G
Sbjct: 532 PHAGCGIG 539


>gi|15611627|ref|NP_223278.1| aspartyl-tRNA synthetase [Helicobacter pylori J99]
 gi|6919975|sp|Q9ZLL9|SYD_HELPJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|4155111|gb|AAD06143.1| ASPARTYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 579

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 95/348 (27%), Gaps = 26/348 (7%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  E+  + +    LQ        T  + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDEDDVMGVVEDLLQEIFKAIGHTISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSP----EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
            +        Y    P    E    ++     +             +          L  
Sbjct: 269 RMPYKEAMENYGSDKPDLRFELPLIEVGDCFMDSSNSIFSNIAQDPKDKR----IKALNV 324

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANID 181
             A   + + +   +                 +      P  +       +      +  
Sbjct: 325 KGADAVFSRSVLKELEEFVRQFGAKGLAYLQIKEDGIKGPLVKFLSEKGLKNILERTDAQ 384

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +G  +      D+ ++     +  ++VA   D    D  + + +                
Sbjct: 385 VGDIV-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVHFPMFEKTENGYHAA 443

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P            +      +++    +EL      +     Q+  FEK         
Sbjct: 444 HHPFTMPKNIECEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----NE 499

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L  L    P   G A+GFDRL+ML+T +N+I +VI  P
Sbjct: 500 EEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSNSIRDVIAFP 547



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 66/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +    + +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDEDDVMGVVEDLLQEIFKAIGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNSIFSNIAQDPKDKRI 319


>gi|297379816|gb|ADI34703.1| aspartyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 577

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 395 DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIE 454

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 455 CEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQKKFGFLL 510

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 511 EALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 66/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S   +M    ++++   +              N     + +   EA   Y 
Sbjct: 231 QIDAEMSFCSENDVMGVVEDLLQEIFKAIGH----------NVSKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +         P           +      +A D     I
Sbjct: 281 SDKPDLRFGLPLIEVGDCFMDSSNAIFSNIAQDPKNKRI 319


>gi|27262452|gb|AAN87507.1| Aspartyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 559

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 67/193 (34%), Gaps = 7/193 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+    ++R++   N F+EI++  L   +P      R F     +    
Sbjct: 98  RRPEMQRNLIVRHKTAKAMRDFLDRNGFLEIETPMLINSTPEG---ARDFLVPSRVH--P 152

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G E+ F     +R+ +     QPEFT L+   +    + +
Sbjct: 153 GEFFALPQSPQIYKQILMVSGMERYFQIVRCFRDEDLRADRQPEFTQLDIEMSFVEMDDI 212

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     ++      A  K                     +   R+  ++L    D     
Sbjct: 213 LSLMEKMVSFIFREALGKEIPASFRRIPYSEAMGRYGSDKPDLRF-GLELTDVTDVVKDV 271

Query: 193 DRHLLYLQAQQAG 205
           +  +    A+  G
Sbjct: 272 EFKVFAAVAKGGG 284



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 54/165 (32%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L     ++  +       ++ +    L+E                 P  E         
Sbjct: 371 NLRLELGRRLNLIDPEKLEFAWVVDFPLLEYDAEEKRYVAIHHPFTSPKDEDLSLLDSDP 430

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K ++L    +EL      +     Q   F      ++E  +K     E +     
Sbjct: 431 AKVRAKAYDLVLNGVELGGGSLRIYHRDIQEKMFSLLGFSQEEATQKFGYLLEAFE---- 486

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                   P   GIA G DR++ML+ G + I +VI  P +QS+ +
Sbjct: 487 -----YGTPPHGGIAFGLDRMIMLMMGRDTIRDVIAFPKTQSSSD 526


>gi|325973166|ref|YP_004250230.1| asparaginyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651768|gb|ADX97850.1| asparaginyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 439

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 61/336 (18%), Positives = 110/336 (32%), Gaps = 42/336 (12%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHIRKP-LY 77
                R  +  ++ ++F EN F    +  L   S      +  F  +    D  +K  + 
Sbjct: 131 AVYQIRREVVKAMNDFFYENHFYPSFAPVLTSNSCEGGAEL--FKLDKEYNDFFKKEQVL 188

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  S +F C ++++AG  K F F   +R+ +     H  EF M+E   +  + E++++  
Sbjct: 189 LSVSGQFYC-EVISAGLGKSFSFGPTFRSEKSNSHAHLAEFWMIEVEESFSNLEKIIQTT 247

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
            N+                                EA    + I     L       R  
Sbjct: 248 YNLFNYMLGKVLD-------------------NCQEALQLISKISQDKDLIERLLKIREA 288

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
            Y  A           +W D  ++   + +   LG      +  +P+ +         D 
Sbjct: 289 KYKLASYRDCLELLKKSWGDELNKEDEQSLCKLLG-TKILFITNFPSEQKPFYMARSEDK 347

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFLAC 312
           + T  F++    +       E    I+           K         +D    E +L  
Sbjct: 348 KTTFSFDMIVEGVGELAGGSEREGKID-----------KLNSSISEMNLDVKELEWYLQL 396

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  S+G  MGF+RL+M +TG  NI ++   P 
Sbjct: 397 RKYGYFSSAGFGMGFERLLMFLTGLKNIKDLSVFPR 432


>gi|284007618|emb|CBA73238.1| aspartyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 587

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L +R  I S +R +     F++I++  L   +P     ++            
Sbjct: 129 RRPEMATRLRERAKITSFVRRFMDAEGFVDIETPILTKATPEGARDYLVPSRVHKGEFYA 188

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 189 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAEQ 242

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +IR            +Q            +T AEA  RY   D     +  + 
Sbjct: 243 VREVMERLIRNL----------WQKNKGIELGTFPVMTFAEAMQRY-GSDKPDLRNPLEL 291

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +      A +D    +
Sbjct: 292 IDIADLVNLVEFKVFAEAANDPKGRV 317



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 51/157 (32%), Gaps = 14/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   I   +      I    + E+ E +  +N        P   +        
Sbjct: 407 ALRLKVGRDLAITQNNSWKPLWIIDFPMFEEDE-HGELNAMHHPFTAPKDFTPEQLQANP 465

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  +++     E+      +     Q+  FE     +  ++ K            L
Sbjct: 466 LAAVANAYDMVINGYEVGGGSVRIHHNKMQQAVFEILNISQTDQQDKFG--------FLL 517

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P  +G+A G DRLVML+TG  NI +VI  P
Sbjct: 518 EALQYGTPPHAGLAFGLDRLVMLLTGTENIRDVIAFP 554


>gi|229062097|ref|ZP_04199422.1| Aspartyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717249|gb|EEL68924.1| Aspartyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 591

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 75/208 (36%), Gaps = 31/208 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R               R+ +  ++R +    +F+E+++  L   +P     ++ 
Sbjct: 124 DVRLKYRYLDLRRPAMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 184 PSRVHDGEFYALPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQI 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++++    ++    + A     S         +    +  A+A AR+   
Sbjct: 238 DIEASFLTQDEILEMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARF-GS 287

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
           D   T    +  D   L   A   G +V
Sbjct: 288 DKPDTRFEMELKD---LSEFAVGCGFKV 312



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|125973846|ref|YP_001037756.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|125714071|gb|ABN52563.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
          Length = 595

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 66/190 (34%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +    R+YF E+ FIEI++  L   +P     ++            
Sbjct: 141 RRPDMQRNLMLRHRVAKIARDYFDEHGFIEIETPMLTKSTPEGARDYLVPSRVHPGKFFA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++       +R+ +     QPEFT ++   +  + E 
Sbjct: 201 LPQ------SPQLFKQLLMVAGFDRYMQIVKCFRDEDLRADRQPEFTQIDLEMSFVNVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      I         K    + +N +       +   EA  R+   D        + 
Sbjct: 255 VLTINEGFI---------KRVFKEAINVDLEIPFIRMPYKEAMERF-GTDKPDIRFGFEL 304

Query: 192 PDRHLLYLQA 201
            +   L    
Sbjct: 305 VNLSDLVENC 314



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 52/159 (32%), Gaps = 9/159 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+    +  +  +    L+E  E              P  E         
Sbjct: 415 QLRVEIARKLGLLDNKEFKFLWVTEFPLLEYDEEEKRYVAKHHPFTSPMDEDVELLDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                K +++     E+      +     Q   F      K   ++E    D     L  
Sbjct: 475 LKVRAKAYDIVLNGTEIGGGSIRIHSQELQSKMF------KLLGFSEKDAWDRFGFLLEA 528

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                P   G+A G DRLVML+ G N+I +VI  P  Q+
Sbjct: 529 FKYGTPPHGGMAFGLDRLVMLMAGRNSIRDVIAFPKVQN 567


>gi|291613441|ref|YP_003523598.1| aspartyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291583553|gb|ADE11211.1| aspartyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 598

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 78/208 (37%), Gaps = 19/208 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  ++ R     + R +  +  FI+I++  L   +P     ++            
Sbjct: 131 RRPQMQHNMMLRYKTARAFRRFLDDKGFIDIETPMLTKSTPEGARDYLVPSRVHAGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 191 LPQ------SPQLFKQMLMVAGFDRYYQITKCFRDEDLRADRQPEFTQVDIETSFLTEEQ 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M     +IR   +            N    +    +T AEA  R+ +   D+  TL+  
Sbjct: 245 IMVLMEEMIRTVFKEVL---------NVALPNPFPRMTYAEAMGRFGSDKPDMRVTLEIT 295

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +  D          AG+  + +   + +
Sbjct: 296 EVTDAVKDVAFKVFAGVANSDNGRVAAL 323



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 43/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G           +    + E  +     N C      P  E         
Sbjct: 411 ALRSKIGHEKGYTNGKAWEPLWVVDFPMFEYDDEAKRWNACHHPFTAPKDEHLALLESDP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K ++L     E+      +     Q   F            E        L  L 
Sbjct: 471 GKCLAKAYDLALNGSEIGGGSVRIHKEEVQSKVFRALNI----GAEEAQLKFGFLLDALQ 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DR+V ++TG+ +I +VI  P
Sbjct: 527 YGAPPHGGLAFGLDRIVTMMTGSESIRDVIAFP 559


>gi|237756201|ref|ZP_04584766.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691630|gb|EEP60673.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 602

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 79/200 (39%), Gaps = 21/200 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  ++ R+ +  ++RE+   N FIE+++  L   +P      R F     ++   
Sbjct: 142 RRPSMQRNIILRHEVYQAVREFLAGNGFIEVETPMLTKSTPEG---ARDFLVPSRLE--- 195

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ AG E+ F  A  +R+ +     QPEFT ++   +  + + 
Sbjct: 196 KGKFYALPQSPQLFKQVLMVAGLERYFQIAKCFRDEDLRADRQPEFTQIDLEMSFVTEDD 255

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    ++I+   +              +       ++  EA  +Y   D        + 
Sbjct: 256 VMTLSESLIQYVYKKVLG---------IDIKIPFRRMSYEEAINKY-GTDKPDLRYGLEL 305

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            D   +   A++   +V +D
Sbjct: 306 ID---ITDLAKEVEFKVFND 322



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
           ++  +   I  +  +    +   +     E N  +            +    +    +P 
Sbjct: 419 HIAEKMNLIDNSKLEFLWVVDFPLFEWDEEENRLVAIHHPFTSPKDEDIDRLDEALNNPE 478

Query: 258 FTKRF-----ELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDED 308
               F     ++     E+      +  P  Q   F+     E + K+K           
Sbjct: 479 IALSFKSKAYDMVLNGEEIGGGSIRIHTPYIQEKVFQLLNISEEEAKEKFG--------F 530

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +  L    P   G+A G DR++ L+TG+ +I +VI  P
Sbjct: 531 LIEALSYGAPPHGGLAFGLDRILALMTGSESIRDVIAFP 569


>gi|134110734|ref|XP_775831.1| hypothetical protein CNBD2410 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258497|gb|EAL21184.1| hypothetical protein CNBD2410 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 513

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 53/382 (13%), Positives = 113/382 (29%), Gaps = 51/382 (13%)

Query: 4   IPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNET 57
           +P+    + + H R R       +  R+ +     ++F  + F+ + +  L  S      
Sbjct: 134 LPASVLRD-NAHLRFRTSQTAAVMRIRDALARDWHDWFESHDFVHVHTPILTGSDCEGAG 192

Query: 58  HIRAFSTELIIQDHIRK------PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
            +                     P++L  S +    +       + +  + ++R      
Sbjct: 193 EVFTIVDHPPPSSSSSPQPFFPHPVHLTVSAQLHL-EAPTHALSRTYTLSPSFRAEPSLT 251

Query: 111 CLHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVA--NQKIFSFQNVNCNPFSEPEY 167
             H  EF MLE   A E   + L+      ++         +K       + +  ++   
Sbjct: 252 SRHLSEFHMLEAEVAWENDLDGLLSVVEEGVKSTVGNILNGEKRGKRLRDDLSIVAKSLR 311

Query: 168 I-----TVAEAFARYAN-------IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
                 +V +    +A+       +               LL      +   ++    W 
Sbjct: 312 DVDDLGSVIDPAQEFADPLYHLQLVMDKPFTRITYTSALELLSSLHADSPSTISPPPLWG 371

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-----------IYPADPRFTKRFEL 264
              S    + +  +   N    + RYP                    + +     + F+L
Sbjct: 372 QGISTDHEKLLAAH--FNGPVFVTRYPKELKPFYMLPTPSTIENEKTHASQGSTVECFDL 429

Query: 265 -YACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIA 323
            +    E+           E  H  E+   +K++     + +D   L          G  
Sbjct: 430 LFPHWGEMAGGSLREHRLTELTHAIEEMGMKKEEYN---WYLD---LRK-YGSVPHGGWG 482

Query: 324 MGFDRLVMLVTGANNINEVIWT 345
           MG+DR V  VTG  N+ +V+  
Sbjct: 483 MGWDRWVGWVTGLGNVRDVVPY 504


>gi|322379215|ref|ZP_08053606.1| aspartyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322379713|ref|ZP_08054026.1| aspartyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147862|gb|EFX42449.1| aspartyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148355|gb|EFX42864.1| aspartyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 602

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 70/193 (36%), Gaps = 16/193 (8%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLYL 78
                R+ +  ++R+      F+EI++  L   +P      R F     + D   +   L
Sbjct: 156 EIFKMRSKVAKAVRDCLDSLDFLEIETPMLSKTTPEG---ARDFLIPSRVHD--GQFFAL 210

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
             SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E +++    
Sbjct: 211 PQSPQLFKQILMVAGMDRYYQIVKCFRDEDLRSDRQPEFTQIDVEMSFCTQEDVIEVAET 270

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++                        +++T  EA   Y +       + P      L  
Sbjct: 271 LLKAVFSCVG----------VEITPPFKHLTYQEATESYGSDKPDLRFEMPLVEVGDLFV 320

Query: 199 LQAQQAGIRVAHD 211
             + +   ++A D
Sbjct: 321 DSSNEIFKKIASD 333



 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 47/344 (13%), Positives = 98/344 (28%), Gaps = 19/344 (5%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEI-DSMSLQYSPGNETHIRAFSTELI 67
           + + D    R+P       I   +  +  +   IE+ +++           I      L 
Sbjct: 236 FRDEDLRSDRQPEF---TQIDVEM-SFCTQEDVIEVAETLLKAVFSCVGVEITPPFKHLT 291

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
            Q+      Y    P+   +  L    +     ++          +   F  L       
Sbjct: 292 YQEA--TESYGSDKPDLRFEMPLVEVGDLFVDSSNEIFKKIASDSYNNRFKALRVE--GG 347

Query: 128 SY---EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
                 + + +    +R         I   +     P  +       E   +     +G 
Sbjct: 348 DRLLSRKYLSEAEEFVRQFGAKGLAYIQVKEEGAKGPLVKFISEAALETLLKRTQAKVGD 407

Query: 185 TLDNPDQPDRHLLYLQAQ-QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
            L       + +L    + +  +    +   S  F+ + +        +        +P 
Sbjct: 408 ILFFGAGEKKVILDYMGRLRLKLGQDLNLIDSQAFNFLWVVDFPMFEEVEGKLSAAHHPF 467

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                    P     +  +++    +EL      +     Q+  F+  +   ++   E  
Sbjct: 468 TMPKNLEGKPTQI-QSIAYDIVLNGVELGGGSIRIHKQAIQKEVFKI-LGISEQ---EAQ 522

Query: 304 PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 L  L    P   G AMGFDRL+ML+    +I +VI  P
Sbjct: 523 EKFGFLLEALQYGAPPHGGFAMGFDRLIMLLAKVPSIRDVIAFP 566


>gi|240143875|ref|ZP_04742476.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257204136|gb|EEV02421.1| aspartate--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291535084|emb|CBL08196.1| aspartyl-tRNA synthetase [Roseburia intestinalis M50/1]
 gi|291539597|emb|CBL12708.1| aspartyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 597

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +   +R++  +  F+EI++  L + +P     ++            
Sbjct: 141 RRPDIQKNLMLRSKVAYLMRDFMAKEGFLEIETPMLCKSTPEGARDYLVPSRVHPGHFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT  +   A    E 
Sbjct: 201 LPQ------SPQLYKQLLMCSGYDRYFQIARCFRDEDLRADRQPEFTQADMELAFVDVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++   + A     +              +   EA  R+   D   T    + 
Sbjct: 255 VLDVNERLLKYIFKEAIGVDVT---------LPLPRMPWQEAMDRF-GSDKPDTRFGMEL 304

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 305 CDVSKVVEGC 314



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 51/156 (32%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +   +   +  +    L+E  +              P  E         
Sbjct: 415 ALRLELAKELDLLDPNQYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     EL      +     Q   FE     K++     +      L    
Sbjct: 475 GSVRAKAYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKER----AHEQFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVM +  A++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLVMHMVHADSIRDVIAFPKVK 566


>gi|256004299|ref|ZP_05429281.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281418007|ref|ZP_06249027.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|255991733|gb|EEU01833.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409409|gb|EFB39667.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316939957|gb|ADU73991.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 595

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 66/190 (34%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +    R+YF E+ FIEI++  L   +P     ++            
Sbjct: 141 RRPDMQRNLMLRHRVAKIARDYFDEHGFIEIETPMLTKSTPEGARDYLVPSRVHPGKFFA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++       +R+ +     QPEFT ++   +  + E 
Sbjct: 201 LPQ------SPQLFKQLLMVAGFDRYMQIVKCFRDEDLRADRQPEFTQIDLEMSFVNVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      I         K    + +N +       +   EA  R+   D        + 
Sbjct: 255 VLTINEGFI---------KRVFKEAINVDLEIPFIRMPYKEAMERF-GTDKPDIRFGFEL 304

Query: 192 PDRHLLYLQA 201
            +   L    
Sbjct: 305 VNLSDLVENC 314



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 52/159 (32%), Gaps = 9/159 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+    +  +  +    L+E  E              P  E         
Sbjct: 415 QLRVEIARKLGLLDNKEFKFLWVTEFPLLEYDEEEKRYVAKHHPFTSPMDEDVELLDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                K +++     E+      +     Q   F      K   ++E    D     L  
Sbjct: 475 LKVRAKAYDIVLNGTEIGGGSIRIHSQELQSKMF------KLLGFSEKDAWDRFGFLLEA 528

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                P   G+A G DRLVML+ G N+I +VI  P  Q+
Sbjct: 529 FKYGTPPHGGMAFGLDRLVMLMAGRNSIRDVIAFPKVQN 567


>gi|326498091|dbj|BAJ94908.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 566

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 84/283 (29%), Gaps = 22/283 (7%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRA 125
              D  ++  +L  S +   +    A    ++ F   +R        H  EF M+E   A
Sbjct: 297 FENDFFKRQAFLTVSGQLQVETYACA-LSNVYTFGPTFRAENSHTSRHLAEFWMVEPEIA 355

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             + +  M      ++   +   +              +        A  R   +     
Sbjct: 356 FANLQDDMNCAEKYVQYLCKWLLKHCREDMEFMVKHVDK-------AAIERLELVSSTPF 408

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                     +L    ++   +V      +    R L E I     I     +  YP   
Sbjct: 409 ERISYTKAVEILEGVDKKFENKVEWGIDLASEHERYLTEVIFKKPVI-----VYNYPKGI 463

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
            A       D +     ++    +       EL+   ++  R +   Q          P 
Sbjct: 464 KAFYMRLNDDQKTVAAMDVLVPKV------GELIGGSQREERLDILTQRILDADLPLEPY 517

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            E +L        + SG  +GF+R+++  TG  NI +VI  P 
Sbjct: 518 -EWYLDLRRFGSVKHSGFGLGFERMILFATGLENIRDVIPFPR 559


>gi|16330502|ref|NP_441230.1| aspartyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2500971|sp|P73851|SYD_SYNY3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|1652993|dbj|BAA17910.1| aspartyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 599

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 68/183 (37%), Gaps = 19/183 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +  ++R +  +   F+EI++  L   +P     ++           
Sbjct: 136 RRARLSQNLQLRHQVVKAMRRFLEDQENFLEIETPILTRSTPEGARDYLVPSRVNPGEWY 195

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   +    E
Sbjct: 196 ALPQ------SPQLFKQLLMVAGMDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMGQE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++     +I    +V           N +       +T  E+ A+Y   D   T    +
Sbjct: 250 EILDLNEALICHIFKVV---------KNIDLPRPFPRLTYQESMAKY-GNDRPDTRFGLE 299

Query: 191 QPD 193
             D
Sbjct: 300 LVD 302



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 38/130 (29%), Gaps = 5/130 (3%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I    +              +P       ++        + ++L    +E+      
Sbjct: 436 LLWITDFPMFEWNSDEKRFEALHHPFTAPHPDDLGDLKTARAQAYDLVMNGVEIGGGSLR 495

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           +     Q   F            E +      L       P   GIA G DRLVML+   
Sbjct: 496 IYQREVQEKVF----ATIGLSPEEAHEKFGFLLDAFEYGTPPHGGIAYGLDRLVMLLAKE 551

Query: 337 NNINEVIWTP 346
           ++I +VI  P
Sbjct: 552 DSIRDVIAFP 561


>gi|239904667|ref|YP_002951405.1| aspartyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239794530|dbj|BAH73519.1| aspartyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 592

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +     + RN    S+R Y  E  F+E+++  L   +P      R F     + +  
Sbjct: 137 RRPKLAANFILRNKAVQSIRRYLDELGFLEVETPVLTKSTPEG---ARDFLVPSRVNNG- 192

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    EQ
Sbjct: 193 --SFYALPQSPQLFKQLLMMAGFDRYYQVVKCFRDEDLRADRQPEFTQVDIEMSFVDEEQ 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +++     A   +   +     PF+E       +       + L         
Sbjct: 251 VMGMAETMVKTMFREAAGVVL-PEVFPRMPFAEAIRDYGLDKPDIRFGLKLVDVTSIVKN 309

Query: 192 PDRHLLYLQAQQAGIRVA 209
               +        GIRV 
Sbjct: 310 SGFQVFAKAELVKGIRVP 327



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 50/153 (32%), Gaps = 27/153 (17%)

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP---ADPRF----------- 258
              + F  I      P    +   +    P  +   A  +P     P             
Sbjct: 410 QLGERFEMIPEGSFAPVWITDFPLLEYD-PEAKRWAARHHPFTSPQPGQLGTLESAPGEA 468

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT 314
             + ++L     E+      + D   QR  F         +  +    ++ F   L  L 
Sbjct: 469 LARAYDLVLNGSEIGGGSIRIHDRETQRAMF-------AVLGIDAQEAEDKFGFLLRALE 521

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DRL+M++ GA +I +VI  P
Sbjct: 522 YGAPPHGGIAFGLDRLIMILAGAKSIRDVIAFP 554


>gi|163942152|ref|YP_001647036.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229013620|ref|ZP_04170751.1| Aspartyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229135226|ref|ZP_04264025.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|229169145|ref|ZP_04296860.1| Aspartyl-tRNA synthetase [Bacillus cereus AH621]
 gi|229470553|sp|A9VIM8|SYD_BACWK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|163864349|gb|ABY45408.1| aspartyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228614373|gb|EEK71483.1| Aspartyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228648268|gb|EEL04304.1| Aspartyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228747679|gb|EEL97551.1| Aspartyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 591

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 75/208 (36%), Gaps = 31/208 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R               R+ +  ++R +    +F+E+++  L   +P     ++ 
Sbjct: 124 DVRLKYRYLDLRRPAMFNTFKMRHDVTKTIRNFLDTEEFLEVETPILTKSTPEGARDYLV 183

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 184 PSRVHDGEFYALPQ------SPQLFKQLLMVGGFERYYQVARCFRDEDLRADRQPEFTQI 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++++    ++    + A     S         +    +  A+A AR+   
Sbjct: 238 DIEASFLTQDEILEMMERMMTKVMKDAKGVEVS---------APFPRMKYADAMARF-GS 287

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
           D   T    +  D   L   A   G +V
Sbjct: 288 DKPDTRFEMELKD---LSEFAVGCGFKV 312



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 13/136 (9%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANI----YPADPRFTKRFELYACNIELCN 273
           F  +    +              +P       ++       +    + ++L     EL  
Sbjct: 428 FLWVTDWPLLEYDEDADRYFAAHHPFTMPFREDVELLETAPEKARAQAYDLVLNGYELGG 487

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               + +   Q   F      K   +   E        L       P   GIA+G DRLV
Sbjct: 488 GSLRIYERDVQEKMF------KALGFSQEEAQEQFGFLLEAFEYGTPPHGGIALGLDRLV 541

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  N+ + I  P
Sbjct: 542 MLLAGRTNLRDTIAFP 557


>gi|226468248|emb|CAX69801.1| asparaginyl-tRNA synthetase [Schistosoma japonicum]
          Length = 495

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 48/352 (13%), Positives = 111/352 (31%), Gaps = 47/352 (13%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
           Q+ ++    R  +  +   L   ++  ++ R ++++  ++E+   +       G  T   
Sbjct: 177 QLDNRHLVIRGENTAK--VLRLISIALAAFRGHYIDRGYVEVLPPTFVQTQVEGGST--- 231

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   ++  +  ++  S +   +  + A     FC   ++R  +     H  E+  
Sbjct: 232 -----LFSLNYFGETAFMSQSSQLYLETCIPA-IGDCFCITRSYRAEKSRTRRHLSEYNH 285

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E       +  L+    +++              Q+ +      P++      F R   
Sbjct: 286 VEAECPFIDFNGLLNRIEDLVVDVC-----DRIVKQSGDLLLDVNPQFKPPKGPFKRLKY 340

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            D    L+N    +  L                 + D        ++   +G     +L 
Sbjct: 341 EDAIVQLNNLGITNEDLT-------------PFQFGDDIPEAPERRLVDTIGE--PVLLT 385

Query: 240 RYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
            +PA   +        DPR T   +L    +         +D I+   +      + ++I
Sbjct: 386 NFPAGLKAFYMLRTKGDPRLTDSVDLLVPGVGELVGGSMRMDNIDDLLK----GYKSEEI 441

Query: 299 YNETYPIDED---FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               Y    D   F           G  +GF+R    + G +++ +V   P 
Sbjct: 442 DPTPYYWYTDQRKF-----GTCPHGGYGLGFERFCTWLLGKDHLRDVCLYPR 488


>gi|253688202|ref|YP_003017392.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511866|sp|C6DFE7|SYD_PECCP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|251754780|gb|ACT12856.1| aspartyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 598

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 73/227 (32%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  E+ F++I++  L   
Sbjct: 109 PLDSNQTNTEEARLKYRYLDLRRPEMAQRLKTRARITSFVRRFMDEHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREVMEKLVRELWLDVKGVDLG----------DFPIMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  R+   D     +  +  D   L             +D    +
Sbjct: 273 AEAMRRF-GSDKPDLRNPLELVDVADLVKNIDFKVFSGPANDAKGRV 318



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +  DD+W  ++        E    G+         P                   ++
Sbjct: 416 DLSLTKDDSWEPLWVVDFPMFEEDGEGGLAAMHHPFTAPRDMLPSELAANPVSAIANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           +     E+      + +   Q+  F      E ++++K            L  L    P 
Sbjct: 476 MVINGYEVGGGSVRIHNGDMQQTVFSILGITEQEQREKFG--------FLLDALKYGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRLVML+TG +NI +VI  P
Sbjct: 528 HAGLAFGLDRLVMLLTGTDNIRDVIAFP 555


>gi|147677384|ref|YP_001211599.1| aspartyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189082107|sp|A5D3E3|SYD_PELTS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146273481|dbj|BAF59230.1| aspartyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 603

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+    S+R++  E+ F+EI++  L   +P     ++            
Sbjct: 141 RRPEMQEALIFRHRAAKSVRDFLDEHGFLEIETPMLTRSTPEGARDYLVPSRVNPGRFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQILMVAGMDRYFQIARCFRDEDLRADRQPEFTQIDIEMSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++                           ++  EA  R+   D   T    + 
Sbjct: 255 VLELTEGMVARLCREVAGLDIP---------RPFPRLSYREAMDRF-GSDKPDTRFGMEL 304

Query: 192 PD 193
            D
Sbjct: 305 KD 306



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 50/153 (32%), Gaps = 5/153 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +    L+E  +              P                 K 
Sbjct: 421 ERLGLIPEGTYHFLWVVDFPLLEYNQEEGRYEAMHHPFTSPRETDIPLLESDPGRVRAKA 480

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           ++L     E+      +     Q   F     +++    E        L       P   
Sbjct: 481 YDLVLNGTEVGGGSIRIHRRDVQEKVFTAIGIDRE----EASEKFGFLLEAFEYGTPPHG 536

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           GIA+GFDRLVML+ G N I +VI  P +QS  +
Sbjct: 537 GIALGFDRLVMLLAGKNTIRDVIAFPKTQSATD 569


>gi|227514340|ref|ZP_03944389.1| possible lysine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087312|gb|EEI22624.1| possible lysine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 248

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 45/110 (40%), Gaps = 17/110 (15%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     + +  YR+R                R  I  ++R Y  +N F+E+++ 
Sbjct: 143 LRPLPDKYHGLQDPELVYRQRYLDLITNRESFERFQTRTKIIKAVRRYMDDNGFLEVETP 202

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKI 97
            L+         R F T     + +   +Y++ + E   K+L+  G E++
Sbjct: 203 ILENIASGA-EARPFVTH---HNALNIDMYMRIATELRLKRLIVGGMERV 248


>gi|261821375|ref|YP_003259481.1| aspartyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261605388|gb|ACX87874.1| aspartyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 598

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 69/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQRLKTRARITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R                      +   +T AEA  R+   D     +  + 
Sbjct: 244 VREVMEKLVRELWLDVKGVDLG----------DFPIMTFAEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLLKDIEFKVFSGPANDVKGRV 318



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +  D++W  ++        E    G+         P                   ++
Sbjct: 416 DLSLTKDNSWEPLWVVDFPMFEEDGEGGLAAMHHPFTAPRDMLPSELSANPVAAIANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           +     E+      +     Q+  F      E ++++K            L  L    P 
Sbjct: 476 MVINGYEVGGGSVRIHRGEMQQTVFGILGITEQEQREKFG--------FLLDALKYGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRLVML+TG +NI +VI  P
Sbjct: 528 HAGLAFGLDRLVMLLTGTDNIRDVIAFP 555


>gi|289674666|ref|ZP_06495556.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 330

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 29/217 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  +N F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F +  ++T  EA  RY   
Sbjct: 236 DIETSFLNEEDIIGLTEKMVRQLFKEVLDL----------EFGDFPHMTFEEAMRRY-GS 284

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D     +  +  D        +        +D    +
Sbjct: 285 DKPDLRNPLELVDVADQLTGVEFKVFSGPANDPKGRV 321


>gi|254518566|ref|ZP_05130622.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912315|gb|EEH97516.1| aspartyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 594

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +   + RN I  S+R+Y  +N F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQRIFMIRNRISKSVRDYLDDNNFLEVETPMLTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    E 
Sbjct: 193 PGMFYALPQSPQIFKQLLMVSGFDRYYQIVKCFRDEDLRANRQPEFTQIDLEMSFVEQED 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++K    +I    +                    + +T  +A  +Y   D        + 
Sbjct: 253 VIKMNEGLIAHVFKEVAGVDVK---------LPIKRMTFKDAMEKY-GSDKPDLRFGMEI 302

Query: 192 PD 193
            +
Sbjct: 303 TN 304



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 195 HLLYLQAQQAG-IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
            L    A+Q   I+  ++  ++ I    L E  E     +        P  E        
Sbjct: 412 ALRLELAKQFDLIKDKNEFNFTWITEFPLFEYDEEEGRYHAAHHPFTSPMDEDIDMLETN 471

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--TYPIDEDFLA 311
                +K ++L     EL      + D   Q+  F      K   + E          + 
Sbjct: 472 PGEVRSKAYDLVLNGEELGGGSIRIHDSKLQQKMF------KALGFTEESAQERFGFLID 525

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 P   G+A G DR+VM + G  NI +VI  P
Sbjct: 526 AFKFGPPPHGGLAFGLDRMVMFLAGTENIKDVIAFP 561


>gi|188585918|ref|YP_001917463.1| aspartyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229470562|sp|B2A2G0|SYD_NATTJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|179350605|gb|ACB84875.1| aspartyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 585

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ I   +R++  EN FIE+++  L   +P      R F     +    
Sbjct: 134 RRPSMQNNIYLRHKITKLVRDFLDENGFIEVETPMLTKSTPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+A+G EK F  A  +R+ +     QPEF+ ++   +    E+
Sbjct: 188 EGSFYALPQSPQLFKQLLMASGVEKYFQIARCFRDEDLRADRQPEFSQIDIEMSFFEQEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            MK   N++    +       +              IT  EA  RY   D        + 
Sbjct: 248 FMKLMENMVSKLFKEVLGIELT---------KPFPRITYQEAMDRY-GSDSPDLRYGLEL 297

Query: 192 PDRHLLYLQAQ 202
            D   L   A+
Sbjct: 298 HDVSDLVKDAE 308



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 55/363 (15%), Positives = 100/363 (27%), Gaps = 52/363 (14%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFI------------EIDSMSLQYSPGNE 56
           + + D    R+P     + I   +  +F + +F+            E+            
Sbjct: 220 FRDEDLRADRQPEF---SQIDIEM-SFFEQEEFMKLMENMVSKLFKEV---------LGI 266

Query: 57  THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
              + F     I        Y   SP+      L    + +                Q +
Sbjct: 267 ELTKPF---PRITYQEAMDRYGSDSPDLRYGLELHDVSDLVKDAEFKVFRETVASEGQVK 323

Query: 117 FTML----EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
              +    E+ R                  A  V  ++             E + I   +
Sbjct: 324 GIAVPQGQEFSRKEIDDLTEFVKEFGAKGLAWMVLEEEEIKSPIAKFFSDEELDGI--ID 381

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYL---QAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
                    L    D P+     L  L    A +  +  +++   + +    L+E  +  
Sbjct: 382 RMGANTGDLLLFVADEPEIVADSLSKLREHLANKLDLIPSNEYQLTWVIDFPLMEYDKDE 441

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                       P  +         +    K ++L    +E+      +     Q   FE
Sbjct: 442 GRYKALHHPFTSPYEDDLEKYENEPEKIRAKAYDLVLNGVEIGGGSMRIHQKELQEKMFE 501

Query: 290 ------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 +E ++K     E +             P   GIA G DRLVML TG+ +I +VI
Sbjct: 502 FLGIPLEEAKQKFGFLFEAFE---------YGTPPHGGIAFGLDRLVMLFTGSQSIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|226329879|ref|ZP_03805397.1| hypothetical protein PROPEN_03792 [Proteus penneri ATCC 35198]
 gi|225200674|gb|EEG83028.1| hypothetical protein PROPEN_03792 [Proteus penneri ATCC 35198]
          Length = 594

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 71/207 (34%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +     F+++++  L   +P     ++            
Sbjct: 130 RRPEMSDRLKTRAKITSFVRRFMDGEGFLDVETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMSADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +I             + ++          +T AEA  RY   D     +  + 
Sbjct: 244 VREVMERMIHAL----------WLDILNVDLGAFPVMTFAEAMRRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   L    + +    A +D    + 
Sbjct: 293 KDIADLVKDVEFSVFAQAANDEKCRVI 319



 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 47/135 (34%), Gaps = 13/135 (9%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +    + E+ E    ++        P   S               +++     E+     
Sbjct: 430 VIDFPMFEEDEETGSLSAMHHPFTSPKDLSPAELTAHPVGAVANAYDMVINGYEVGGGSV 489

Query: 277 ELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
            +     Q+  F        ++++K            L  L    P  +G+A G DRLVM
Sbjct: 490 RIHRNEMQQAVFGILGITPNEQQEKFG--------FLLEALKFGTPPHAGLAFGLDRLVM 541

Query: 332 LVTGANNINEVIWTP 346
           L+TG +NI +VI  P
Sbjct: 542 LLTGTDNIRDVIAFP 556


>gi|116074179|ref|ZP_01471441.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I
           [Synechococcus sp. RS9916]
 gi|116069484|gb|EAU75236.1| Aspartyl-tRNA synthetase:GAD domain:tRNA synthetase, class I
           [Synechococcus sp. RS9916]
          Length = 611

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 21/207 (10%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +      R    L  R     + R +  +  FIE+++  L   +P     +I     
Sbjct: 129 RHRYLDLRRKRMNDNLRLRAQTIQTARSFLEDEGFIEVETPVLTRSTPEGARDYILPSRV 188

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                    +   L  SP+   + L+  G EK +  A  +R+ +     QPEFT L+   
Sbjct: 189 ------CGGEWFALPQSPQLFKQLLMVGGIEKYYQVARCFRDEDLRADRQPEFTQLDMEM 242

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    E+++     +I    +                      +T  +A  RY   D   
Sbjct: 243 SFMGQEEILDLNERLICSIWKTVKG---------IELPRPFPRMTWHDAMERY-GTDRPD 292

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHD 211
           T    +  +   +    +  G +V   
Sbjct: 293 TRYCMELTN---VSDIVKDMGFKVFSG 316



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 13/156 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPR- 257
            A++ G+     D     F  ++   +              +P       ++   AD   
Sbjct: 421 LARELGMVKPDQDNDQWNFLWVVDFPMFEFNSDENRYEALHHPFCAPNTDDLGSDADQWA 480

Query: 258 ------FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
                   + ++L    +EL      + D   QR   +      +    E        + 
Sbjct: 481 NTLPGARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLE----EAQEQFGFLIE 536

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DR+VML+ G  +I + I  P
Sbjct: 537 ALDMGAPPHGGLAFGLDRMVMLLAGEESIRDTIAFP 572


>gi|97196794|sp|Q46I98|SYD_PROMT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 606

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 64/187 (34%), Gaps = 18/187 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +      R    L  R+    + R +     FIE+++  L   +P     ++     
Sbjct: 129 KHRYLDLRRERMNNNLRLRHNTVKAARSFLENEGFIEVETPILTRSTPEGARDYLVPSRV 188

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 189 CGGEFFALPQ------SPQLFKQLLMVGGVERYYQVARCFRDEDLRADRQPEFTQLDIEM 242

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    +++++    +I    +              +  +    +T  EA  R+   D   
Sbjct: 243 SFMEEKEIIELNEKLIVSIWKKIKG---------IDLQTPFPRMTWQEAMDRF-GTDRPD 292

Query: 185 TLDNPDQ 191
           T    + 
Sbjct: 293 TRYGMEL 299



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 7/144 (4%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD--PRFTKRFE 263
           ++   +  W   F        E  L           P       +++         + ++
Sbjct: 433 LKTQWNFLWVTDFPMFEFNSDENRLEAIHHPFCAPKPEDIGESESLWKDKLPNSNAQAYD 492

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           L    +E+      + +   Q+   E     K    NE        +  L    P   GI
Sbjct: 493 LVLNGLEIGGGSLRIHNSELQKTVLEVIGLSK----NEAEEQFGFLIDALAMGAPPHGGI 548

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DR+VML+   ++I + I  P
Sbjct: 549 AFGLDRIVMLLANEDSIRDTIAFP 572


>gi|317131289|ref|YP_004090603.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469268|gb|ADU25872.1| aspartyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 595

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 65/190 (34%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ I  +  +YF  N FIEI++   ++ +P     ++            
Sbjct: 139 RRPEMQNHLFLRHRIVKAAHDYFDRNGFIEIETPNLIKSTPEGARDYLVPSRLHAGKFYA 198

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    E 
Sbjct: 199 LPQ------SPQLYKQILMLSGFDRYMQIARCFRDEDLRADRQPEFTQIDLELSFVDEED 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M      IR   +    K            +  + +   EA ARY   D        + 
Sbjct: 253 IMALNEGYIRHVFKEVLGKDVQ---------TPFQRLPYDEAMARY-GSDKPDVRFGMEL 302

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 303 RDLSETVKGC 312



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 15/160 (9%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+    +  +  +    L E  E              P  ES           + 
Sbjct: 418 LAERFGLIPKDEFAFLWVTHFPLFEYSEEEGRYMAMHHPFTAPTEESLDKLESDPGTCYA 477

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKE------MQEKKKIYNETYPIDEDFLACL 313
           + +++    +EL      + DP  Q+  F+        ++++     E +          
Sbjct: 478 RAYDMVLNGVELGGGSIRINDPALQKRMFKALGLSDDVVRQRFGFLTEAF---------R 528

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A G DRLVML+ G  +I +VI  P  Q+  E
Sbjct: 529 YGAPPHGGMAYGLDRLVMLMLGCESIKQVIAFPKVQNASE 568


>gi|320120308|gb|EFE28550.2| aspartate--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 592

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 71/200 (35%), Gaps = 21/200 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +   L R+ +  S+R +  +  F+EI++  L   +P     ++            
Sbjct: 138 RKPKMQYNFLMRHKVTQSVRNFLSKEGFLEIETPILTKPTPEGARDYLVPSRVNKGHFYA 197

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 198 LPQ------SPQLFKQLLMTSGMDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEIDD 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++                N    +  + +   EA  RY   D        + 
Sbjct: 252 VLDVTERLMKTVFHEVL---------NMEIQTPFKRMKWQEAMDRY-GSDKPDIRFGFEI 301

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            D   +    +  G +V  +
Sbjct: 302 ND---VSDIVKDCGFKVFDE 318



 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           H+    A++ G+   ++  +  +    L E  E              P  E         
Sbjct: 412 HIRLEAAKKLGVIDENEFAFLYVVEFPLYEYNEEENRYVAAHHPFTAPIDEDLKLFNSSP 471

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +    K +++    IEL      +     Q   FE     K+    E        L    
Sbjct: 472 ENMHAKAYDIVLNGIELGGGSIRIHTKDVQDKMFEALGFTKE----EAEEKFGFLLNAFQ 527

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DRL+ML+   +NI EVI  P
Sbjct: 528 YGTPPHGGIAFGLDRLLMLMLKRDNIREVIAFP 560


>gi|304396239|ref|ZP_07378121.1| aspartyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356608|gb|EFM20973.1| aspartyl-tRNA synthetase [Pantoea sp. aB]
          Length = 592

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 70/203 (34%), Gaps = 29/203 (14%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S    + +   + R            L  R  I S +R +  +  F++I++  L   
Sbjct: 109 PLDSNQTNSEEARLKYRYLDLRRPEMVTRLKTRAKITSFVRRFMDDEGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    +IR   +                  E   +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREIMERLIRNLWQDVQGVDLG----------EFPQMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPD 193
           AEA  RY   D     +  +  D
Sbjct: 273 AEAMHRY-GSDKPDLRNPMELVD 294



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 14/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  I          +    + E+ E   G+         P   SA       
Sbjct: 408 ALRLKVGRELNITDEKAWAPLWVIDFPMFEEDEE-GGLAAMHHPFTAPKEMSAEELAADP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFL 310
                  +++     E+      + +   Q+  F     +E ++++K            L
Sbjct: 467 TRAVANAYDMVINGYEVGGGSVRIHNGKMQQTVFSILGIEEHEQREKFG--------FLL 518

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 519 DALKFGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|300723087|ref|YP_003712385.1| aspartate tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297629602|emb|CBJ90205.1| aspartate tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 589

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 68/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +  F+++++  L   +P     ++            
Sbjct: 130 RRPEMSQRLKTRAKITSFVRRFMDDAGFLDVETPMLTKATPEGARDYLVPSRVHKGEFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAGQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +IR   +                      +T  EA  R+   D     +  + 
Sbjct: 244 VREIMEKMIRELWQEVRGVDLDN----------FPIMTFEEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    + A      ++    +
Sbjct: 293 VDVADLVKDVEFAVFAEPANNPKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 47/141 (33%), Gaps = 19/141 (13%)

Query: 215 SDIFSRILIEKIEPNL--GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
                 I     E N   G+         P   SA       +      +++     E+ 
Sbjct: 425 WKPLWVIDFPMFEENGEGGLTAMHHPFTSPRDMSASELESNPESAIANAYDMVINGYEVG 484

Query: 273 NACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMG 325
                +     Q+  F      E+E QEK              L  L    P  +G+A G
Sbjct: 485 GGSVRIHRNEMQQIVFRILGINEQEQQEKFG----------FLLNALKYGTPPHAGLAFG 534

Query: 326 FDRLVMLVTGANNINEVIWTP 346
            DRLVML+T  +NI +VI  P
Sbjct: 535 LDRLVMLLTNTDNIRDVIAFP 555


>gi|291485164|dbj|BAI86239.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 592

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 72/223 (32%), Gaps = 18/223 (8%)

Query: 11  NRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFS 63
            +  +   RRP     +  R+ +  ++R +  EN F++I++  L   +P     ++    
Sbjct: 128 LKHRYLDLRRPAMFQTMQMRHNVTKAVRSFLDENGFLDIETPILTKSTPEGARDYLVPSR 187

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                   + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++  
Sbjct: 188 VHEGEFYALPQ------SPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQPEFTQIDIE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  S E +M    +++                               +   R+  +   
Sbjct: 242 MSFMSQEDIMSLAEDMMAKIMRETKGVEIKLPLPRMTYDEAMNKYGSDKPDTRFDMLLTD 301

Query: 184 TTLDNPDQPDRHLLYLQA-----QQAGIRVAHDDTWSDIFSRI 221
            +    D   +      A     +   ++    D        +
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGGAGDYSRKDIDAL 344



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 50/168 (29%), Gaps = 11/168 (6%)

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCTILDRYPA 243
           L   DQ +     L A +  +         ++F+ +      +  +           +P 
Sbjct: 395 LFGADQFEVVAASLGALRLKLGKERGLIDENLFNFLWVIDWPLLEHDPEEGRFYAAHHPF 454

Query: 244 PESALAN----IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                 +        +    + ++L     EL      + +   Q   F           
Sbjct: 455 TMPVREDLELIETAPEDMKAQAYDLVLNGYELGGGSIRIFEKDIQEKMF----ALLGFSP 510

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L       P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 511 EEAAEQFGFLLEAFEYGAPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 558


>gi|253681699|ref|ZP_04862496.1| aspartate--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561411|gb|EES90863.1| aspartate--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 591

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 65/194 (33%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+     +R++  EN F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQSIFKIRHKTAKVIRDFLDENGFLEMETPMLTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 193 PGMFYALPQSPQLFKQLLMVSGYDRYFQITKCFRDEDLRANRQPEFTQVDMELSFVDMED 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I+   +                    +     +   R+  +++    D    
Sbjct: 253 VISLNERLIKKVFKEIADVDVKLPIQRITYKEAMDKYGSDKPDLRF-GMEINNITDAVKD 311

Query: 192 PDRHLLYLQAQQAG 205
            D  +     +  G
Sbjct: 312 IDFKVFKDAIENGG 325



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 47/154 (30%), Gaps = 6/154 (3%)

Query: 195 HLLYLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
            L    A++  I +   +  ++ +    L+   E              P  E        
Sbjct: 412 ALRLEMAKRLEILKDNKEFKFAWVTEFPLLSYNEEENRYQAEHHPFTMPMDEDIEYLESD 471

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                 K +++     EL      + D   Q   F       +      +      L   
Sbjct: 472 PGRVRAKAYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSES----AWERFGFLLEAF 527

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A GFDR++M + G  NI +VI  P
Sbjct: 528 KFGPPPHGGLAYGFDRMIMFLAGTENIKDVIAFP 561


>gi|50121421|ref|YP_050588.1| aspartyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|62287553|sp|Q6D497|SYD_ERWCT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49611947|emb|CAG75396.1| aspartyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 599

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 69/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRARITSFVRRFMDDHGFMDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R                      +   +T AEA  R+   D     +  + 
Sbjct: 245 VREVMEQLVRELWLDVKGVDLG----------DFPVMTFAEAMRRF-GSDKPDLRNPLEL 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 294 VDVADLLKDIEFKVFSGPANDAKGRV 319



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +  +++W  ++        E    G++        P                   ++
Sbjct: 417 DLNLTKNNSWEPLWVVDFPMFEEDGEGGLSAMHHPFTAPRDMLPSELAANPVSAIANAYD 476

Query: 264 LYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           +     E+      +     Q+  F      E ++++K            L  L    P 
Sbjct: 477 MVINGYEVGGGSVRIHSGEMQQTVFRILGITEQEQREKFG--------FLLDALKYGTPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRLVML+TG +NI +VI  P
Sbjct: 529 HAGLAFGLDRLVMLLTGTDNIRDVIAFP 556


>gi|322822542|gb|EFZ28562.1| asparaginyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 745

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/352 (15%), Positives = 106/352 (30%), Gaps = 44/352 (12%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTEL 66
           D H   R       +  R+ +  + REY       E+   +L Q      + +       
Sbjct: 414 DRHLVLRGTYGSTTIKVRHELIRAFREYCWSVNMFEVTPPTLVQAECEGGSTLFDVI--- 470

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
               +     +L  S +    +   +    ++C   ++R  +     H  E+T LE   +
Sbjct: 471 ----YYGTTAHLTQSSQLYL-ETCTSSVGDVYCILPSYRAEKSKTRRHLSEYTHLEVEYS 525

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
              +E  +    ++I  A     +     +  +   F  PE +       +    D    
Sbjct: 526 ICDFELFLSKLEDLIVGAFNRTIE-----RAGDLIAFMNPEQM----VDPKANPCDPNNW 576

Query: 186 LDNPDQPDRHLLYLQAQQA-------GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
              P +P R L Y  A +                 + D  +      +   LG      +
Sbjct: 577 KFAPKKPFRRLKYADAIKLCNDNGILNPETNAPFQFGDDITDQPERAMVAILGE--MVFM 634

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKK 296
             +PA   S      P DP  T+  ++ A  I E+      + D  E           +K
Sbjct: 635 THFPAVMKSFYMARDPEDPTLTESVDVLAPGIGEIVGGSMRMWDHEELIE-----AYRRK 689

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +    Y     +            G  +G +R ++ +   +++ E    P 
Sbjct: 690 DLDPSVYY---WYTEQRKYGSTPHGGFGLGVERFLVWLLNLDSVREACLFPR 738


>gi|323466685|gb|ADX70372.1| Aspartyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 617

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 8/196 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ I  +  E+F EN FI+I++  L + SP     ++            
Sbjct: 136 RRPEVQQAIILRSKILRATYEFFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMEMSFADEKT 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +              +           +   RY  +    +    D 
Sbjct: 250 IQDYTEGLLKKIMKDVKSIDLKTPIKRISWTDSMNKYGCDKPDTRYGMLIHDLSPIFKDS 309

Query: 192 PDRHLLYLQAQQAGIR 207
             +      A    ++
Sbjct: 310 DFKVFSGAIADGGFVK 325



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++  I       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAKETDIIPKGVYDFVWVVDWPLFEYDEGLGRWVAAHHPFTMPDDEGVKLLTTEP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                + +++     E+      +     Q   F      K   + E    ++    L  
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEDMF------KALGFTEKRAYEQFGYLLDA 523

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P  +G+A+G DR  M++   +NI +V+  P
Sbjct: 524 LDMGFPPHAGLAIGLDRFAMMLADKDNIRDVLAFP 558


>gi|317010837|gb|ADU84584.1| aspartyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 577

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/344 (13%), Positives = 99/344 (28%), Gaps = 18/344 (5%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  EN  + +    LQ        T  + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDENDVMGVVEDLLQEIFKAIGHTISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
            +        Y    P+   +  L    +     ++A  +             L    A 
Sbjct: 269 RMPYKEAMENYGSDKPDLRFELPLIEVGDCFMDSSNAIFSNIAKDPKNKRIKALNVKGAD 328

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYANIDLGTT 185
             + + +   +                 +      P  +       +      N  +G  
Sbjct: 329 VIFSRSVLKELEEFVRQFGAQGLAYLQIKEDEIKGPLVKFLSEKGLKNILERTNAQVGDI 388

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
           +      D+ ++     +  ++VA   D    +  + + +                 +P 
Sbjct: 389 V-FFGAGDKKIVLDYMGRLRLKVAEMLDLIDKNALNFLWVVNFPMFEKTENGYHAAHHPF 447

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                      +      +++    +EL      +     Q+  FE+   +      E  
Sbjct: 448 TMPKNIECEDMEEIEAYAYDVVLNGVELGGGSIRIHKEDMQKKVFERINID----EEEAQ 503

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 L  L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 504 KKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTQSHSIRDVIAFP 547



 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 65/219 (29%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLSAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQEIFKAIGHT----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNAIFSNIAKDPKNKRI 319


>gi|253989953|ref|YP_003041309.1| aspartyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211639066|emb|CAR67679.1| aspartyl-trna synthetase (ec 6.1.1.12) (aspartate--trna ligase
           (asprs) [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781403|emb|CAQ84566.1| aspartyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 590

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S    + +   + R            L  R  I S +R +     F++I++  L   
Sbjct: 109 PLDSNQTNSEEQRLKYRYIDLRRPEMANRLKTRAKITSFVRRFMDSQDFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  + EQ+ +    +IR                          +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAEQVREIMEKMIRELWLEIKGVDLGH----------FPVMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  R+   D     +  +  D   L    + +      +D+   +
Sbjct: 273 AEAMRRF-GSDKPDLRNPLELVDVADLVKNVEFSVFAEPANDSKGRV 318



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +          +    + E  E   G++        P   SA   +   
Sbjct: 408 ALRLKLGRDLNLTKLDSWQPLWVIDFPMFEDNEE-GGLSAMHHPFTSPRNMSAEELVQEP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      +     Q+  F      E+E QEK             
Sbjct: 467 VSAIANAYDMVINGYEVGGGSVRIHRNEMQQAVFNILGINEQEQQEKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+TG +NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRDVIAFP 555


>gi|297539708|ref|YP_003675477.1| aspartyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297259055|gb|ADI30900.1| aspartyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 594

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 76/196 (38%), Gaps = 19/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R  +  +LR+Y  +N FIE+++  L   +P     ++        +   
Sbjct: 131 RRPAMQKNMMLRYKVSKNLRDYLDDNGFIEVETPMLTRSTPEGARDYLVPSRVHHGMFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +  +  Q
Sbjct: 191 LPQ------SPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQPEFTQVDIETSFMTENQ 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M     +IR   +            N +  +    ++  +A  RY +   D+  TL+  
Sbjct: 245 IMDIVEEMIRQMLKKV---------QNVDLPAAFPRMSFHKAMTRYGSDKPDMRVTLEIT 295

Query: 190 DQPDRHLLYLQAQQAG 205
           +  D          AG
Sbjct: 296 ELSDVMKDVDFKVFAG 311



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 45/153 (29%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L        G           +    + E  E N            P        +   
Sbjct: 411 ALRLKVGHDKGHVDGRAWAPLWVVDFPMFEHDEENDRWAALHHPFTAPKDGHEDLLVTNP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               +K +++     E+      +     Q   F+     K+    E        L  L 
Sbjct: 471 GAALSKAYDMVLNGWEVGGGSVRIHKQDVQSKVFDALKISKE----EAQEKFGFLLDALQ 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 527 YGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 559


>gi|153955740|ref|YP_001396505.1| aspartyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856109|ref|YP_002473231.1| hypothetical protein CKR_2766 [Clostridium kluyveri NBRC 12016]
 gi|189082091|sp|A5N1Y8|SYD_CLOK5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781727|sp|B9E5P2|SYD_CLOK1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146348598|gb|EDK35134.1| AspS [Clostridium kluyveri DSM 555]
 gi|219569833|dbj|BAH07817.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 590

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +   + R+     +R++  E  F+EI++  L + +P     ++          ++
Sbjct: 139 RRPDMQRIFMLRHKTAKVIRDFLDEQGFLEIETPILGKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             K   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E+
Sbjct: 193 KGKYYALPQSPQLFKQLLMVSGYDRYFQIAKCFRDEDLRANRQPEFTQVDMEISFVDQEE 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I+             Q ++ +     E +T   A  +Y   D        + 
Sbjct: 253 VMDLNERLIQ---------RVFKQILDVDVKLPIERMTYKTAMDKY-GSDKPDLRFGMEI 302

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 303 NDISEVVK 310



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 51/148 (34%), Gaps = 6/148 (4%)

Query: 201 AQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
           A+Q GI    +D  +  I    L+   E              P  E         +    
Sbjct: 418 AKQTGILEGNNDFKFVWITEFPLLSYNEEENRYQAEHHPFVMPMDEDIQYLESNPEKVRA 477

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           K +++     EL      + D   Q   F      K    +  +     FL  L    P 
Sbjct: 478 KAYDIVLNGEELGGGSIRIHDTKLQEKMFGAIGISK----DTAWNKFGYFLEALKFGPPP 533

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A GFDR++M + G +NI +VI  P
Sbjct: 534 HGGLAYGFDRMIMFLAGTDNIKDVIAFP 561


>gi|121535604|ref|ZP_01667411.1| aspartyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305844|gb|EAX46779.1| aspartyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 510

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 68/182 (37%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +  ++R++F  + F+E+++  L   +P     ++            
Sbjct: 140 RRPEMQRNLILRHRVTKAMRDFFDRHGFVEVETPMLTKSTPEGARDYLVPSRVNPGKFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A  +R+ +     QPEFT L+   +    + 
Sbjct: 200 LPQ------SPQIFKQILMVAGLDRYFQIARCFRDEDLRADRQPEFTQLDVEMSFVERDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I    + A                    ++  EA ARY   D   T    + 
Sbjct: 254 VLNLMEEMIAFIFKEAIGATVP---------LPFPRLSYDEAMARY-GTDKPDTRFGMEL 303

Query: 192 PD 193
            D
Sbjct: 304 ID 305


>gi|152979462|ref|YP_001345091.1| aspartyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704347|sp|A6VQA9|SYD_ACTSZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150841185|gb|ABR75156.1| aspartyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 589

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  ++ F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     N+IR                      +   +T  EA  R+   D     +  + 
Sbjct: 245 VRAIMENMIRGLWLNILGADLG----------KFPIMTWNEAMTRF-GSDKPDLRNPLEI 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +             +D    +
Sbjct: 294 ADVADIVKDVDFKVFADPANDANGRV 319



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 51/157 (32%), Gaps = 14/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E  E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFECDEEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
                  +++     E+      + DP  Q+  F      E Q+++K            L
Sbjct: 468 TAAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEQQQREKFG--------FLL 519

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 520 DALKFGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 556


>gi|321312283|ref|YP_004204570.1| aspartyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320018557|gb|ADV93543.1| aspartyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 592

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 72/223 (32%), Gaps = 18/223 (8%)

Query: 11  NRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFS 63
            +  +   RRP     +  R+ +  ++R +  EN F++I++  L   +P     ++    
Sbjct: 128 LKHRYLDLRRPAMFQTMQMRHNVTKAVRSFLDENGFLDIETPILTKSTPEGARDYLVPSR 187

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                   + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++  
Sbjct: 188 VHEGEFYALPQ------SPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQPEFTQIDIE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  S E +M    +++                               +   R+  +   
Sbjct: 242 MSFMSQEDIMSLAEDMMAKIMRETKGVEIKLPLPRMTYDEAMNKYGSDKPDTRFDMLLTD 301

Query: 184 TTLDNPDQPDRHLLYLQA-----QQAGIRVAHDDTWSDIFSRI 221
            +    D   +      A     +   ++    D        +
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGGAGDYSRKDIDAL 344



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 50/168 (29%), Gaps = 11/168 (6%)

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCTILDRYPA 243
           L   DQ +     L A +  +         ++F+ +      +  +           +P 
Sbjct: 395 LFGADQFEVVAASLGALRLKLGKERGLIDENLFNFLWVIDWPLLEHDPEEGRFYAAHHPF 454

Query: 244 PESALAN----IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                 +        +    + ++L     EL      + +   Q   F           
Sbjct: 455 TMPVREDLELIETAPEDMKAQAYDLVLNGYELGGGSIRIFEKDIQEKMF----ALLGFSP 510

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L       P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 511 EEAAEQFGFLLEAFEYGAPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 558


>gi|118443262|ref|YP_877922.1| aspartyl-tRNA synthetase [Clostridium novyi NT]
 gi|166225341|sp|A0PZX0|SYD_CLONN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118133718|gb|ABK60762.1| aspartyl-tRNA synthetase [Clostridium novyi NT]
          Length = 593

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 70/200 (35%), Gaps = 21/200 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+     +R++  EN F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQKIFKVRHKTAKVIRDFLDENGFLEMETPMLTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K F     +R+ +     QPEFT ++   +    E 
Sbjct: 193 PGMFYALPQSPQLFKQLLMVSGYDKYFQITKCFRDEDLRANRQPEFTQVDMELSFVDMED 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I+   +            N +     + IT  EA  +Y   D        + 
Sbjct: 253 VIALNEKLIQKVFKEV---------ANVDVQLPIQRITYKEAMDKY-GSDKPDLRFGMEI 302

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            D   +    +    +V  D
Sbjct: 303 ND---ITDAVKDVDFKVFKD 319



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 47/154 (30%), Gaps = 6/154 (3%)

Query: 195 HLLYLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
            L    A++  I +   +  ++ +    L+   E              P  E        
Sbjct: 412 ALRLEMAKRLEILKDNKEFRFAWVTEFPLLSYNEEEDRYQAEHHPFTMPMDEDIEYLESD 471

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                 K +++     EL      + D   Q   F       +      +      L   
Sbjct: 472 PGRVRAKAYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSES----AWERFGFLLEAF 527

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A GFDR++M + G  NI +VI  P
Sbjct: 528 KFGPPPHGGLAYGFDRMIMFLAGTENIKDVIAFP 561


>gi|313837757|gb|EFS75471.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314927362|gb|EFS91193.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314972694|gb|EFT16791.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|328907447|gb|EGG27213.1| aspartate--tRNA ligase [Propionibacterium sp. P08]
          Length = 606

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 65/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R+   L+ R+ +  ++RE    + F +I++ +L   +P      R F     +    
Sbjct: 132 RRPRQHEALVLRSQVTHAIREVLDRHNFYDIETPTLTRSTPEG---ARDFLVPARL--AP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDIEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +      +    ++             +  +    IT  EA  RY +        N    
Sbjct: 247 IALAEETMAACWKIIG----------VDMPTPIPRITWHEAMDRYGSDKPDLRFSNEIIE 296

Query: 193 DRHLLYL 199
                  
Sbjct: 297 VTDFFAN 303



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       ++      E+      +     Q   F          
Sbjct: 454 FTSPTPDCLDTFDTDPGSALAHAYDFVVNGNEVGGGSIRIHRRDIQERVFNVMGI----G 509

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G   I +VI  P
Sbjct: 510 PEEAQKKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFP 558


>gi|219849931|ref|YP_002464364.1| aspartyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|254781723|sp|B8G6W9|SYD_CHLAD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219544190|gb|ACL25928.1| aspartyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 588

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 66/188 (35%), Gaps = 16/188 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R +  L+ R+ +   +R++     FIEI++  L   +P     ++            
Sbjct: 133 RRERMQRNLILRHRVVKFIRDFLDAEGFIEIETPILIKSTPEGARDYLVPSRLHPGKFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K F  A  +R+ +Q    QPEFT L+   +      
Sbjct: 193 LPQ------SPQQLKQLLMVAGYDKYFQIARCFRDEDQRADRQPEFTQLDMEMSFVD--- 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                   +    E    ++      +    +    +T AEA  RY +       D    
Sbjct: 244 -----QEDVINLIERLFTELCRTVTPHKRLLTPFRRLTYAEAMERYGSDKPDLRYDLELV 298

Query: 192 PDRHLLYL 199
               +L  
Sbjct: 299 NLSDVLAE 306



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 41/153 (26%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A    +       ++ +    L+E  E     +        P  E         
Sbjct: 409 KLRRKLADLLQLADPDTLCFAWVVDFPLVEWNEEEQRWDAVHHPFTSPKDEDLHLLATDP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                K ++L     E       +     Q+  F            +        L    
Sbjct: 469 GKVRAKAYDLILNGYEAGGGSIRIHRRDVQQQVF----SLLGIGEEKAQAQFGHMLEAFE 524

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DRLVM++     I EV+  P
Sbjct: 525 YGAPPHGGIAPGIDRLVMILADEPTIREVMAFP 557


>gi|124026867|ref|YP_001015982.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|123961935|gb|ABM76718.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 612

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 64/187 (34%), Gaps = 18/187 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +      R    L  R+    + R +     FIE+++  L   +P     ++     
Sbjct: 135 RHRYLDLRRERMNNNLRLRHNTVKAARSFLENEGFIEVETPILTRSTPEGARDYLVPSRV 194

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 195 CGGEFFALPQ------SPQLFKQLLMVGGVERYYQVARCFRDEDLRADRQPEFTQLDIEM 248

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    +++++    +I    +              +  +    +T  E+  R+   D   
Sbjct: 249 SFMEEKEIIELNEKLIVSIWKKIKG---------IDLQTPFPRMTWQESMDRF-GTDRPD 298

Query: 185 TLDNPDQ 191
           T    + 
Sbjct: 299 TRYGMEL 305



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 7/144 (4%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD--PRFTKRFE 263
           ++   +  W   F        E  L           P       +++         + ++
Sbjct: 439 LKTQWNFLWVTDFPMFEFNSDENRLEAIHHPFCAPKPEDIGESESLWKDKLPNSNAQAYD 498

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           L    +E+      + +   Q+   E     K    NE        +  L    P   GI
Sbjct: 499 LVLNGLEIGGGSLRIHNSELQKTVLEVIGLSK----NEAEEQFGFLIDALAMGAPPHGGI 554

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DR+VML+   ++I + I  P
Sbjct: 555 AFGLDRIVMLLANEDSIRDTIAFP 578


>gi|325989609|ref|YP_004249308.1| asparaginyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574694|emb|CBZ40350.1| Asparaginyl-tRNA synthetase [Mycoplasma suis]
          Length = 439

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 60/332 (18%), Positives = 113/332 (34%), Gaps = 34/332 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHIRKP-LY 77
                R  +  ++ ++F EN F    +  L   S      +  F  +    D  RK  + 
Sbjct: 131 AVYQIRREVVKAMNDFFYENHFYPSFAPVLTSNSCEGGAEL--FKLDKEYNDFFRKEQVL 188

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  S +F C ++++AG  K F F   +R+ +     H  EF M+E   +  + E++++  
Sbjct: 189 LSVSGQFYC-EIISAGLGKSFSFGPTFRSEKSNSHAHLAEFWMIEVEESFSNLEKIIQTT 247

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
            N+                                EA    + I     L       R  
Sbjct: 248 YNLFNYMLGKVLD-------------------NCQEALQLISKISQDKDLIERLLKIREA 288

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
            Y  A  +        +W D  ++   + +   LG      +  +P+ +         D 
Sbjct: 289 KYKLASYSDCLELLKKSWGDELNKEDEQSLCKLLG-TKILFITNFPSEQKPFYMTRSEDK 347

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
           + T  F++    +       E    I+      +      ++  +   + E +L      
Sbjct: 348 KTTFSFDMIVEGVGELAGGSEREGKID------ELNSSISEMNLDVKEL-EWYLQLRKYG 400

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              S+G  MGF+RL+M +TG  NI ++   P 
Sbjct: 401 YFSSAGFGMGFERLLMFLTGLKNIKDLSVFPR 432


>gi|238792579|ref|ZP_04636212.1| Aspartyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238728214|gb|EEQ19735.1| Aspartyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 598

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKSRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q        +   +T AEA  R+   D     +  + 
Sbjct: 244 VREVMEKLVREL----------WQETKGVDLGDFPVMTFAEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDAKGRV 318



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S               +++     E+      +     Q+  F
Sbjct: 441 EGGLTAMHHPFTAPKEMSPEQLAAAPTTAIANAYDMVINGYEVGGGSVRIHRTEMQQQVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 GILGINEHEQREKFG--------FLLDALKYGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|229824083|ref|ZP_04450152.1| hypothetical protein GCWU000282_01387 [Catonella morbi ATCC 51271]
 gi|229786437|gb|EEP22551.1| hypothetical protein GCWU000282_01387 [Catonella morbi ATCC 51271]
          Length = 588

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 70/203 (34%), Gaps = 20/203 (9%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
           +     +  +      R +  L  R+ + S++R Y  +  FI++++  L   +P      
Sbjct: 125 LRM---RHRFLDLRRPRMQANLRLRHQVTSAIRRYLDDLGFIDVETPYLTKSTPEGARD- 180

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
                 L+      K   L  SP+   + L+ AG ++ +     +R+ +     QPEFT 
Sbjct: 181 -----YLVATREAGKFFALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQ 235

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++   +  +   + +    +++   +       +              +T A A A Y  
Sbjct: 236 IDLETSFLNQADIQEIVEQMLKEVVKATRGLDMT---------EAFPSMTYAHAMAHY-G 285

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQ 202
           +D      +    D        Q
Sbjct: 286 VDKPDIRFDMTLKDLSDFAANCQ 308



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  I    L E  E              P      A     
Sbjct: 409 ELRVNLAKAHQLFDEDALAFVWITDWPLFEYDEEAGRYFAAHHPFTSPQNLDLEALKANP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           D    + +++     E+      +     Q   F+           E        L  L 
Sbjct: 469 DQALAQAYDIVLNGYEIGGGSIRIHTRPMQEQMFD----LLGFTPEEAQSQFGFLLDALD 524

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A+G DRLVML+    NI EVI  P
Sbjct: 525 YGFPPHGGLALGLDRLVMLLAKEPNIREVIAFP 557


>gi|28211802|ref|NP_782746.1| aspartyl-tRNA synthetase [Clostridium tetani E88]
 gi|46577247|sp|Q892B2|SYD_CLOTE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28204244|gb|AAO36683.1| aspartyl-tRNA synthetase [Clostridium tetani E88]
          Length = 592

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+    ++R++  + +F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQKILKIRHKTAKAVRDFLDKEEFLEVETPMLTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 PGMFYALPQSPQLFKQLLMVSGFDKYFQIVKCFRDEDLRANRQPEFTQIDLEMSFVEMDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I+   +    K               E +    A ++Y +           +
Sbjct: 253 VIDLNERLIQYVFKNVVGKDIK---------LPIERMPYKIAMSKYGSDKPDLRFGMEIE 303

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
               +L   + +    V  +
Sbjct: 304 NLDDVLKETSFKVFKEVIDN 323



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 48/150 (32%), Gaps = 8/150 (5%)

Query: 200 QAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
            A++ G+ +   +  +  +    L+   E              P  E             
Sbjct: 418 LAKELGLLKDNDELRFVWVTEFPLVSYNEEEDRWEAEHHPFTAPMDEDIQYLDTDPGKVR 477

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACLT-EM 316
            K +++     EL      + D   Q   FE           E  +      L       
Sbjct: 478 AKAYDIVLNGEELGGGSIRIHDTKLQEKMFEVL-----GFTEEKAWERFGFLLEAFKFGP 532

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A GFDR++M ++G  NI +VI  P
Sbjct: 533 PPHGGLAFGFDRMIMFLSGTENIKDVIAFP 562


>gi|261838142|gb|ACX97908.1| aspartyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 577

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 395 DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIE 454

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 455 CEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEAQKKFGFLL 510

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 511 EALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 67/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +  + R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLSAYEIFKLRSEVALTARNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S   +M    ++++   +              +     + +   EA   Y 
Sbjct: 231 QIDAEMSFCSENDVMGVVEDLLQEIFKAIGH----------HISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +         P           +      +A D     I
Sbjct: 281 SDKPDLRFGLPLIEVGDCFMDSSNAIFSNIAQDPKNKRI 319


>gi|296107056|ref|YP_003618756.1| aspartyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295648957|gb|ADG24804.1| aspartyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 580

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 80/228 (35%), Gaps = 29/228 (12%)

Query: 4   IPSQPWW-NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
           +P      N D  Y+ R            L  R+ + S +R Y  E  F++I++  L   
Sbjct: 98  LPDDHQIINEDLRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKA 157

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G +K +     +R+ +  
Sbjct: 158 TPEGARDYLVPSRVHPGQFYALPQ------SPQLFKQLLMMSGFDKYYQIVRCFRDEDLR 211

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT L+   A  + E +++    ++         KI   + +N     +   ++ 
Sbjct: 212 ADRQPEFTQLDIEMAFINEEDILQLIEGLL---------KIVFKEILNITLPDKLPRMSY 262

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            EA  RY   D     +  +  D   L           A +D    + 
Sbjct: 263 KEAMTRY-GSDKPDLRNPLELIDIADLVKDCDFNVFSSAANDNSGRVV 309



 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 5/144 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           +        +    + E    +  +         P   SA A          K +++   
Sbjct: 410 INSGWQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTLAKAYDIVIN 469

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +  P  Q+  F+           E +      L  L    P   GIA+G 
Sbjct: 470 GYEIGGGSIRIHQPELQKTVFD----LIGIGEQEAHEKFGFLLDALQYGAPPHGGIALGI 525

Query: 327 DRLVMLVTGANNINEVIWTPFSQS 350
           DRL ML+T + +I +VI  P +Q+
Sbjct: 526 DRLAMLLTDSTSIRDVIAFPKTQT 549


>gi|332993892|gb|AEF03947.1| aspartyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 586

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 73/213 (34%), Gaps = 27/213 (12%)

Query: 15  HYR----RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
            YR    RRP     L  R  +  ++R +     F++I++  L   +P     ++    T
Sbjct: 123 RYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEGEGFLDIETPILTKATPEGARDYLVPSRT 182

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   
Sbjct: 183 HKGEFFALPQ------SPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQPEFTQIDIET 236

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
                + +M    ++IR               +      +   +T AEA  R+   D   
Sbjct: 237 TFLDADGVMAITESMIRDLFST----------MLNVDLGDFPRMTYAEAMKRF-GSDKPD 285

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +  +  D   L    +        +D    +
Sbjct: 286 LRNPLELTDIADLLETVEFKVFSGPANDPKGRV 318



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 13/93 (13%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT 314
           +  +++     EL      + +   Q   FE    +E + K K            L  L 
Sbjct: 469 SDAYDMVLNGCELGGGSVRIHNEEMQSAVFEILGIEEEEAKNKFG--------FLLDALR 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A G DRLVML+TGA++I +V+  P
Sbjct: 521 FGAPPHAGLAFGLDRLVMLMTGASSIRDVMAFP 553


>gi|329893677|ref|ZP_08269811.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328923604|gb|EGG30916.1| Aspartyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 592

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ I S++R    +  F++I++  L   +P     ++    T       
Sbjct: 132 RRTEMQQKLVLRSKITSAVRASLEDQGFLDIETPILTRATPEGARDYLVPSRTHP----- 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +      
Sbjct: 187 -GQFFALPQSPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQIDIEASFIDESD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +IR                      +   +T A+A  R+   D        + 
Sbjct: 246 IMGITETMIRELFSSVLNVDLG----------DFPRMTYADAMERF-GSDKPDLRIPYEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
                L  Q      R   DD    +
Sbjct: 295 VSVDDLMQQVDFKVFRAPADDPEGRV 320



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 63/196 (32%), Gaps = 16/196 (8%)

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
           F   E +          + D+        Q     +     + G  +            +
Sbjct: 373 FMPDEIVMSLMERIDAKDGDIVFFGAGKRQMVEESMGALRIKVGHDMGAVAARWAPLWVV 432

Query: 222 LIEKIEPNLGINCCTILDRYP-APESALANIYPADPRFT--KRFELYACNIELCNACDEL 278
                E     +       +P    S       A+P     + +++     EL      +
Sbjct: 433 DFPMFEKAG--DGSWTALHHPFTSPSCTPEELEANPGQALSRAYDMVLNGTELGGGSIRI 490

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLVT 334
            D   QR  F       + +  E    +E F   L  L    P   G+A G DRLVML+T
Sbjct: 491 HDQAMQRAVF-------RVLGIEAEEAEEKFGFLLQALKFGAPPHGGLAFGLDRLVMLMT 543

Query: 335 GANNINEVIWTPFSQS 350
           GA +I +VI  P +QS
Sbjct: 544 GAQSIRDVIAFPKTQS 559


>gi|72383128|ref|YP_292483.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|72002978|gb|AAZ58780.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 612

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 64/187 (34%), Gaps = 18/187 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +      R    L  R+    + R +     FIE+++  L   +P     ++     
Sbjct: 135 KHRYLDLRRERMNNNLRLRHNTVKAARSFLENEGFIEVETPILTRSTPEGARDYLVPSRV 194

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 195 CGGEFFALPQ------SPQLFKQLLMVGGVERYYQVARCFRDEDLRADRQPEFTQLDIEM 248

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    +++++    +I    +              +  +    +T  EA  R+   D   
Sbjct: 249 SFMEEKEIIELNEKLIVSIWKKIKG---------IDLQTPFPRMTWQEAMDRF-GTDRPD 298

Query: 185 TLDNPDQ 191
           T    + 
Sbjct: 299 TRYGMEL 305



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 7/144 (4%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD--PRFTKRFE 263
           ++   +  W   F        E  L           P       +++         + ++
Sbjct: 439 LKTQWNFLWVTDFPMFEFNSDENRLEAIHHPFCAPKPEDIGESESLWKDKLPNSNAQAYD 498

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           L    +E+      + +   Q+   E     K    NE        +  L    P   GI
Sbjct: 499 LVLNGLEIGGGSLRIHNSELQKTVLEVIGLSK----NEAEEQFGFLIDALAMGAPPHGGI 554

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DR+VML+   ++I + I  P
Sbjct: 555 AFGLDRIVMLLANEDSIRDTIAFP 578


>gi|326790255|ref|YP_004308076.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541019|gb|ADZ82878.1| aspartyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 600

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 60/167 (35%), Gaps = 8/167 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +  S+R +     F+EI++  +Q  +P     ++            
Sbjct: 140 RRPDMQKNLILRSKVTQSVRRFLETEGFLEIETPIMQKSTPEGARDYLVPSRVHPGNFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 200 LPQ------SPQLFKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDMELSFVEPED 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           +M     +I+   + A                  +     +   R+ 
Sbjct: 254 VMAVNERLIQTVFKEALDVDVQLPIQKMTYKEAMDRFGSDKPDLRFG 300



 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 17/162 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +    +  +  I    L+E  E              P  E         
Sbjct: 414 ALRLEVARRLDLINQDEFRFVWITEFPLLEYDEEAGRFVAMHHPFTMPMDEDLEMMETNP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K ++L     EL      +     Q+  F      +++ +E+             
Sbjct: 474 GAVRAKAYDLALNGCELGGGSIRIYQNDVQKRMFNLLGFTDEQAEERFG----------F 523

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            L      +P   G+A G DR++ML+  A++I +VI  P  +
Sbjct: 524 LLNAFKYGVPPHGGLAFGLDRMIMLMCKADSIRDVIAFPKVK 565


>gi|320539869|ref|ZP_08039528.1| aspartyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030055|gb|EFW12075.1| aspartyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 594

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 68/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R+ I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPDMAGRLKTRSKITSLVRHFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    + R                          IT  EA  RY   D     +  + 
Sbjct: 244 VREVMEKLARELWLEVKGVDLG----------RFPVITFEEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +     V  +D    +
Sbjct: 293 VDVADLVKDVEFNVFSVPANDAKGRV 318



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 14/141 (9%)

Query: 212 DTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           D+W+ ++        E    G+         P   +  A            +++     E
Sbjct: 423 DSWAPLWVVDFPMFEEDGEGGLVAMHHPFTAPCNMAPEALASMPTNAIANAYDMVINGYE 482

Query: 271 LCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMG 325
           +      +     Q+  F      E ++++K            L  L    P  +G+A G
Sbjct: 483 VGGGSVRIHHGEMQQTVFSILGINEHEQREKFG--------FLLDALKYGTPLHAGMAFG 534

Query: 326 FDRLVMLVTGANNINEVIWTP 346
            DRLVML+TG +NI +VI  P
Sbjct: 535 LDRLVMLLTGTDNIRDVIAFP 555


>gi|308049720|ref|YP_003913286.1| aspartyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307631910|gb|ADN76212.1| aspartyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 588

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 77/229 (33%), Gaps = 31/229 (13%)

Query: 3   QIPSQPWWN--RDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     +   +   + R            +  R    S +R +  +  F+++++  L 
Sbjct: 107 PLPIDFNTDVSEEQRLKYRYLDLRRPEMAEKMKFRARFTSEVRRFLDDQGFMDVETPILT 166

Query: 51  -YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P     ++    T         +   L  SP+   + L+ +G ++ +     +R+ +
Sbjct: 167 AATPEGARDYLVPSRTHK------GQFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDED 220

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                QPEFT ++   +  + E++M     +IR             + +      +  ++
Sbjct: 221 LRADRQPEFTQIDIETSFMTAEEVMAVTEAMIRTIF----------KKMLNVDLPQFPHM 270

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +  EA  RY   D     +  +  D   L    +        +D    +
Sbjct: 271 SYEEAMRRY-GSDKPDLRNPLELTDVADLLADVEFKVFSGPANDPEGRV 318



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 13/116 (11%)

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KE 291
                 P   +        D   +  +++    +E+      +     Q   F      +
Sbjct: 446 HHPFTAPRDMTPEELEANPDTALSNAYDMVLNGVEVGGGSVRIHRAEMQSAAFRVLGIDD 505

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            + K+K            L  L    P  +G+A G DRLVML+ GA +I EV+  P
Sbjct: 506 QEAKEKFG--------FLLDALKYGTPPHAGLAFGLDRLVMLMVGAESIREVMAFP 553


>gi|89895177|ref|YP_518664.1| aspartyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89334625|dbj|BAE84220.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 592

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 58/188 (30%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+ +   +R +F    F EI++  L   SP     ++            
Sbjct: 135 RRPEMQQVFKIRHQVTQVMRNFFDSQGFYEIETPMLIKSSPEGARDYLVPSRVHPGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G EK F     +R+ +     QPEFT L+   +    E 
Sbjct: 195 LPQ------SPQIFKQLLMVSGMEKYFQIVRCFRDEDLRADRQPEFTQLDVEMSFAEVED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +    +                 +T  EA   Y   D        + 
Sbjct: 249 ILPMMEELMARIFKETIGRDIP---------RPFPRMTYQEAMELY-GSDKPDIRFGMEM 298

Query: 192 PDRHLLYL 199
            D      
Sbjct: 299 VDVAEWVK 306



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 54/166 (32%), Gaps = 17/166 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL     ++ G+       +  +    L++  E +            P  E         
Sbjct: 408 HLRLELGKRLGLIPEDALNFLWVTEFPLLQWDEEDKRFVAIHHPFTSPMTEDLPLLPTEP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                K +++     EL      +     Q   F+      +E + K             
Sbjct: 468 GKVRAKAYDMVLNGTELGGGSIRIHQREVQEQMFDLLGLTPEEAKAKFG----------Y 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            L       P   GIA G DRL ML+TG +NI +VI  P +QS  +
Sbjct: 518 LLDAFEYGTPPHGGIAFGLDRLTMLLTGKDNIRDVIAFPKTQSASD 563


>gi|307197734|gb|EFN78883.1| Probable asparaginyl-tRNA synthetase, mitochondrial [Harpegnathos
           saltator]
          Length = 419

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 106/354 (29%), Gaps = 51/354 (14%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI-RAFSTE 65
           H R R       L  R++  + + ++     FI I +  L  +      E  + +  S E
Sbjct: 89  HLRPRTRNFASVLRLRDLATTVIGDHLRNRGFISIHTPILTSNDCEGAGEVFLVKPQSKE 148

Query: 66  LIIQD----------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL-HQ 114
           ++             +     YL  S +    + +A    K++ F   +R        H 
Sbjct: 149 ILKSMKKEGQSEDEIYFNTTTYLTVSGQMHL-ETMARALTKVYTFGPTFRAENSKSRLHL 207

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF MLE   A  +  + + + + ++         +  +          EP+++      
Sbjct: 208 SEFYMLEAEVAFITNVEELIEEVELLVKEVTKRMIERGASDWQ-SMGIPEPQWLDKKFGC 266

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             Y                    +    +   ++     + ++FS+     +        
Sbjct: 267 LTY-----------------DEAFDVLTEHASKLECPIKYGEVFSKDHELFLVQYNNGVP 309

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             +++     +         DP      +L A ++          D  E           
Sbjct: 310 IFVINWPKNNKPFYMKECTDDPSKVAALDLLAPDVGELVGGSIREDDYE----------- 358

Query: 295 KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           K K+   T      +L         + G  MGF+R +  V G NNI + +  P 
Sbjct: 359 KLKLKLPTMGNLSWYLELRKYGNAPTGGFGMGFERFLQCVLGINNIKDTVPFPR 412


>gi|206891126|ref|YP_002248460.1| aspartyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|226736546|sp|B5YJP5|SYD_THEYD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|206743064|gb|ACI22121.1| aspartyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 594

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 66/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +   L R+ I  ++R +     F+E+++  L   +P      R F     +    
Sbjct: 134 RRAEMQKNFLLRHRITMAVRNFLDSKGFVEVETPMLTKSTPEG---ARDFLVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT +++  +    E 
Sbjct: 188 PGTFYALPQSPQLFKQILMMSGFDRYFQIVRCFRDEDLRADRQPEFTQIDFEMSFVKPED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +   +                + +T  EA  +Y   D        + 
Sbjct: 248 IIEIVEEMLFKCFKEVLEVDIE---------IPFKRLTYEEAINKY-GSDKPDLRFALEI 297

Query: 192 PDRHLLYL 199
            D   L  
Sbjct: 298 QDVSELVK 305



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 56/169 (33%), Gaps = 27/169 (15%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP---------- 244
            L    A++A I+         +   +     E    ++                     
Sbjct: 406 RLRLEIAERAQIKKEGFYFAWVLDFPLFEWDEEEKRFVSMHHPFTSPKDEDIDKLLKIPQ 465

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKI 298
           E+             K +++     EL      +     Q H F      E+E++ +   
Sbjct: 466 EAFYDPQSSVKDIKAKAYDIVLNGYELGGGSIRIHKADIQEHIFRILAISEEEIKRRFG- 524

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                     F+  L    P   GIA+G DRLVM++TGAN++ +VI  P
Sbjct: 525 ---------FFVEALRYGAPPHGGIALGLDRLVMVMTGANSLRDVIAFP 564


>gi|289207699|ref|YP_003459765.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943330|gb|ADC71029.1| aspartyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 594

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 71/227 (31%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            +  +     D   R R            L  R  + +++R +    +F+++++  L   
Sbjct: 111 PLDDEDVG-EDTRLRYRYMDLRRPVMQQRLRLRAQVTAAMRRFLETREFLDLETPMLTKA 169

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++    T       + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 170 TPEGARDYLVPSRTHPGSFFALPQ------SPQLFKQLLMMSGMDRYYQITRCFRDEDLR 223

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT L+   A      +M     +IR                          +  
Sbjct: 224 ADRQPEFTQLDMEMAFVDEADVMDVTEGLIRHLFREVQGVELP---------DPFPRMAY 274

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA AR+   D        +  +   +    +        +D    +
Sbjct: 275 AEAMARF-GSDKPDLRIPLEFTELTEVMQAVEFKVFNGPANDPEGRV 320



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 57/152 (37%), Gaps = 8/152 (5%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY---PAPESALANIYPADPRFT 259
           + G  +   +        +     E + G      L      PA +S  A         +
Sbjct: 414 KLGHDLELVEAGWQPLWVVDFPMFEYDDGDKRLYALHHPFTAPAVDSPDALRANPREALS 473

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           + +++     E+      + +P  Q+  FE          +E        L  L    P 
Sbjct: 474 RAYDMVLNGTEVGGGSIRIHNPEMQQAAFEALGI----GEDEAREKFGFLLDALEFGAPP 529

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             G+A G DRLVML++GA++I +V+  P +Q+
Sbjct: 530 HGGLAFGLDRLVMLMSGAHSIRDVMAFPKTQT 561


>gi|317179021|dbj|BAJ56809.1| aspartyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 577

 Score =  108 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 395 DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIE 454

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 455 CEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----NEEEAQKKFGFLL 510

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 511 EALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 30/223 (13%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S   +M    ++++   +              N     + +   EA   Y 
Sbjct: 231 QIDAEMSFCSENDVMGVVEDLLQEIFKAIGH----------NISKPFKRMPYKEAMENYG 280

Query: 179 N--IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
           +   DL   L   +  D  +    A  + I     +      +
Sbjct: 281 SDKPDLRFGLHLIEVGDCFMDSSNAIFSNIAQDPKNKRIKALN 323


>gi|257439880|ref|ZP_05615635.1| aspartyl-tRNA synthetase [Faecalibacterium prausnitzii A2-165]
 gi|257197693|gb|EEU95977.1| aspartyl-tRNA synthetase [Faecalibacterium prausnitzii A2-165]
          Length = 264

 Score =  108 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 90/280 (32%), Gaps = 33/280 (11%)

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
           +   D+  +  YL  SP+F  +  +AAG E+IF     +R  +     H  EF+  +   
Sbjct: 1   MFKVDYFDRNAYLAQSPQFYKQMAMAAGFERIFETGPVFRAEKSYTNKHATEFSGFDLEF 60

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           ++ +  + +      +  A   A +  +  Q                         ++  
Sbjct: 61  SYITSYKDVMAMEEQLLKAGLQAVKDAYGDQIQELF------------------GKEVIV 102

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCTILDRYP 242
                       LY   ++    V  D    D+ +               +    +  Y 
Sbjct: 103 PETPFPVVKLADLYKGLEEDFGYVVDDSEKGDLTTEAERLSYDWVKKHYNHEFLFVTDYD 162

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           A + A  ++   +    + ++L    +E+            +    +K+ +EK    +  
Sbjct: 163 AEKRAFYHMRDEN-GVPQGYDLIWRGVEITTGAQREH----RYEVLKKQAEEKGLAEDV- 216

Query: 303 YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
               + +L       P   G  +G DRL ML+ G  +I +
Sbjct: 217 ----KFYLEFFQYGCPPHGGFGLGIDRLTMLLVG-ESIKD 251


>gi|78777284|ref|YP_393599.1| aspartyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|97196995|sp|Q30RL7|SYD_SULDN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78497824|gb|ABB44364.1| aspartate--tRNA(Asn) ligase [Sulfurimonas denitrificans DSM 1251]
          Length = 580

 Score =  108 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 73/229 (31%), Gaps = 19/229 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   + R               R+    + R    EN F+E+++  L   +P     ++ 
Sbjct: 121 ETRLKYRYLELRDPSMYETFRLRSKAAIAARNILDENGFLEVETPILTKSTPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT +
Sbjct: 181 PSRVHSGEFYALPQ------SPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQPEFTQI 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +   +  + E +M     ++         +    F  +      E       +       
Sbjct: 235 DVEMSFCNQEDVMLIAEKLLVSMFGACGVEIKPPFNRIAYRDAMEWYGSDKPDLRYDLKM 294

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +D+    +  D      +  Q  +  I+         +FS+  ++  E 
Sbjct: 295 VDVIDIFERCDNEIFTNIAKQPHKNRIKALRVPGADLVFSKREMKTFED 343



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 5/132 (3%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
           D F  + +         +       +P  +    +    +   +  +++     EL    
Sbjct: 424 DAFEFVWVVDFPMFEVEDGRVKALHHPFTQPKDTDKDDIEEIDSIAYDIVLNGTELGGGS 483

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
             +     Q   F    +       E        L  L    P   G A+GFDRL+ML++
Sbjct: 484 IRIHKEEMQEEIF----KLLGIGEEEAKEKFGFLLDALKFGAPPHGGFAIGFDRLMMLIS 539

Query: 335 GANNINEVIWTP 346
             ++I +VI  P
Sbjct: 540 KKSSIRDVIAFP 551


>gi|315586700|gb|ADU41081.1| aspartate--tRNA ligase [Helicobacter pylori 35A]
          Length = 577

 Score =  108 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 395 DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIE 454

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 455 CEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----NEEEAQKKFGFLL 510

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 511 EALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 68/219 (31%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S   +M    ++++   +              N F   + ++  EA   Y 
Sbjct: 231 QIDAEMSFCSENDVMGVVEDLLQEIFKAIGH----------NIFKPFKRMSYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +         P           +      +A D     I
Sbjct: 281 SDKPDLRFGLPLIEVGDCFMDSSNAIFSNIAQDPKNKRI 319


>gi|294141125|ref|YP_003557103.1| aspartyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293327594|dbj|BAJ02325.1| aspartyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 595

 Score =  108 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 80/248 (32%), Gaps = 21/248 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R  + S++R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAERIIFRAKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S  Q
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSAQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R   +                  E   +T AEA  R+   D     +  + 
Sbjct: 246 VMDKTEEMMRSLFKELLNVDLG----------EFPKMTFAEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSD--IFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
            D   L    +    +    D      +       K+              Y A   A  
Sbjct: 295 IDVADLLTDVEFKVFQGPATDPEGRVAVLCIPGGAKLSRKQLDEYAKYATIYGAKGLAWM 354

Query: 250 NIYPADPR 257
            I   D  
Sbjct: 355 KINDLDKG 362



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 48/155 (30%), Gaps = 7/155 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL--GINCCTILDRYPAPESALANIY 252
             +     +AG               +     E     G++        P+  +      
Sbjct: 406 EAMGALRIKAGEDFDLLKGDWKPLWVVDFPMFERTSDGGLHAMHHPFTAPSGMTPEQLEA 465

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
                 +  +++     EL      + +   Q   F     E      E        L  
Sbjct: 466 DPISAISDAYDMVLNGCELGGGSVRIHNSEMQTAVFRILGIE----EEEANEKFGFLLEA 521

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P  +G+A G DR++ML+TG ++I +V+  P
Sbjct: 522 LRYGTPPHAGLAFGLDRIIMLMTGTSSIRDVMAFP 556


>gi|251789862|ref|YP_003004583.1| aspartyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247538483|gb|ACT07104.1| aspartyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 596

 Score =  108 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R                      +   +T AEA  R+   D     +  + 
Sbjct: 244 VREVMEKLVRELWLDVKGVDLG----------DFPIMTFAEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSSPANDPKGRV 318



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 55/148 (37%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            +++ ++++W  ++        E    G+         P   S               ++
Sbjct: 416 DLKITNENSWQPLWVIDFPMFEEDGEGGLAAMHHPFTAPRDMSPSELKANPTAAIANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           +     E+      + +   Q+  F      E Q+++K            L  L    P 
Sbjct: 476 MVLNGYEVGGGSVRIHNGEMQQTVFRILGIDEQQQREKFG--------FLLDALKFGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRLVML+TG +NI +VI  P
Sbjct: 528 HAGLAFGLDRLVMLLTGTDNIRDVIAFP 555


>gi|224541604|ref|ZP_03682143.1| hypothetical protein CATMIT_00775 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525474|gb|EEF94579.1| hypothetical protein CATMIT_00775 [Catenibacterium mitsuokai DSM
           15897]
          Length = 594

 Score =  108 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 22/177 (12%)

Query: 18  RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP L K    R  I  ++ EY    +F+EI++  L   +P      R F     + +  
Sbjct: 134 RRPALQKNIMRRAKIVRAIHEYLDSEEFVEIETPYLNKSTPEG---ARDFLVPSRVHNG- 189

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 --SFYALPQSPQLFKQLLMVAGFERYYQIARCFRDEDLRADRQPEFTQVDVEMSFMNTDQ 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           ++     +I         K      +N +       +T  +A   Y  ID   T  +
Sbjct: 248 VIGIGEGLI---------KKVMKDVMNIDVQLPFPRMTWHDAMETY-GIDKPDTRFD 294



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 13/150 (8%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +       +  +    + E  E +            P                   
Sbjct: 416 KELKLYDPRQFNFLWVVDFPMFEYSEEDGRYYAMHHPFTRPKDSDLDKIDTDPANCLADA 475

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEM 316
           +++     EL      + +   Q   F+     + +   +           F+       
Sbjct: 476 YDIVLNGFELGGGSQRIYEEELQDRAFKALGFTQERIDAQFG--------WFVDAFRYGA 527

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P  +G A+G DR  ML+ G +++ +VI  P
Sbjct: 528 PPHAGFALGLDRFAMLLCGCDSLRDVIAFP 557


>gi|54297389|ref|YP_123758.1| aspartyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|62287532|sp|Q5X586|SYD_LEGPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|53751174|emb|CAH12585.1| Aspartyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 593

 Score =  108 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 80/228 (35%), Gaps = 29/228 (12%)

Query: 4   IPSQPWW-NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
           +P      N D  Y+ R            L  R+ + S +R Y  E  F++I++  L   
Sbjct: 111 LPDDHQIINEDLRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKA 170

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G +K +     +R+ +  
Sbjct: 171 TPEGARDYLVPSRVHPGQFYALPQ------SPQLFKQLLMMSGFDKYYQIVRCFRDEDLR 224

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT L+   A  +     +D + +I    +V  ++I      N     +   ++ 
Sbjct: 225 ADRQPEFTQLDIEMAFIN----EEDILQLIEGLLKVVFKEIL-----NITLPDKLPRMSY 275

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            EA  RY   D     +  +  D   L           A +D    + 
Sbjct: 276 KEAMTRY-GSDKPDLRNPLELIDIADLVKDCDFNVFASAANDNSGRVV 322



 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 7/145 (4%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           +        +    + E    +  +         P   SA A          K +++   
Sbjct: 423 INPGWQLLWVIDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTLAKAYDIVIN 482

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYN-ETYPIDEDFLACL-TEMPQSSGIAMG 325
             E+      +  P  Q+  F+        I   E +      L  L    P   GIA+G
Sbjct: 483 GYEIGGGSIRIHQPELQKTVFD-----LIGIDEQEAHEKFGFLLDALQYGAPPHGGIALG 537

Query: 326 FDRLVMLVTGANNINEVIWTPFSQS 350
            DRL ML+T + +I +VI  P +Q+
Sbjct: 538 IDRLAMLLTDSTSIRDVIAFPKTQT 562


>gi|320186112|gb|EFW60856.1| aspartyl-tRNA synthetase [Shigella flexneri CDC 796-83]
          Length = 314

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 75/217 (34%), Gaps = 30/217 (13%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 92  PLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 151

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 152 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 205

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                      +   +T 
Sbjct: 206 ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTF 255

Query: 171 AEAFARYAN--IDLGTTLDNPDQPDRHLLYLQAQQAG 205
           AEA  RY +   DL   ++  D  D       A  AG
Sbjct: 256 AEAERRYGSDKPDLRNPMELTDVADLLKSVEFAVFAG 292


>gi|331269255|ref|YP_004395747.1| aspartyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329125805|gb|AEB75750.1| aspartyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 591

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 70/200 (35%), Gaps = 21/200 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+     +R++  +N F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQNIFKVRHKTAKVIRDFLDQNGFLEMETPMLTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 193 PGMFYALPQSPQLFKQLLMVSGYDRYFQITKCFRDEDLRANRQPEFTQVDMELSFVDMED 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I         K    +  + +     + IT  EA  +Y   D        + 
Sbjct: 253 VISLNERLI---------KKVFKEIADVDVKLPIQRITYKEAMDKY-GSDKPDLRFGMEI 302

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            D   +    +    +V  D
Sbjct: 303 ND---ITDAVKDVDFKVFKD 319



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 47/154 (30%), Gaps = 6/154 (3%)

Query: 195 HLLYLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
            L    A++  I +   +  ++ +    L+   E              P  E        
Sbjct: 412 ALRLEMAKRLEILKDNKEFRFAWVTEFPLLSYNEEENRYQAEHHPFTMPMDEDIEYLESD 471

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                 K +++     EL      + D   Q   F       +      +      L   
Sbjct: 472 PGRVRAKAYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSES----AWERFGFLLEAF 527

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A GFDR++M + G  NI +VI  P
Sbjct: 528 KFGPPPHGGLAYGFDRMIMFLAGTENIKDVIAFP 561


>gi|289621226|emb|CBI52009.1| unnamed protein product [Sordaria macrospora]
          Length = 566

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 103/333 (30%), Gaps = 57/333 (17%)

Query: 21  FLLKRNMIQSSL-----------REYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
            + KR  +Q ++           R Y   + F E +   L  +  +E     F       
Sbjct: 262 IMHKRAPVQQAIADIRMEVKDLFRSYLKSHGFKEFEPPCLIGAA-SEGGANVFRMP---- 316

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHES 128
            +  K  +L  SP+F  +  +A G +K+F     +R        H  EFT L+       
Sbjct: 317 -YFDKEAFLAQSPQFYKQFEIAGGRKKVFSIGPVFRAENSNTPRHMTEFTGLDLE----- 370

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
               M+   +       +    +  F+ +     +E E +        +   + G  +  
Sbjct: 371 ----MEIKKDYREVLLMLEGVLLHIFRGIKERCAAEIELVRSVYPAEEFLLPEPGKEVRL 426

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                + LL  +  +    V  D+  S    + L   +                      
Sbjct: 427 TFAEGQKLLREEGPEEFRNVTDDEDMSTPQEKALGAIVRKKF------------------ 468

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                 D   T  F+ +    E+ +    + DP E   R  +     K +  ++  I E 
Sbjct: 469 ----NTDFYVTNAFDFFLRGQEILSGGQRINDPEELEARIIQ-----KGVDPKSNGIKE- 518

Query: 309 FLACL--TEMPQSSGIAMGFDRLVMLVTGANNI 339
           ++       +P   G  +G DR+V       ++
Sbjct: 519 YVDVFRQAGVPAHGGGGIGLDRVVAWFLNLPSV 551


>gi|315634730|ref|ZP_07890014.1| aspartate--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476678|gb|EFU67426.1| aspartate--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 588

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 72/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++             +QN+      +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGL----------WQNIIGVDLGKFPVMTWHEAMNRF-GSDKPDLRNPLEL 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  +      +   +D    +
Sbjct: 294 VDVADLVKEVDFKVFQGPANDPNGRV 319



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 14/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ +              P   +        
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFERDDEGNLAAMHHPFTS-PRDFTPEQLEAEP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  +++     E+      + DP  Q+  F      E ++++K            L
Sbjct: 468 TTAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQREKFG--------FLL 519

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 520 DALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|271500736|ref|YP_003333761.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270344291|gb|ACZ77056.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 596

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R                      +   +T AEA  R+   D     +  + 
Sbjct: 244 VREVMEKLVRELWLGVKGVDLG----------DFPIMTFAEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S               +++     E+      + +   Q+  F
Sbjct: 441 EGGLAAMHHPFTAPRDMSPSELKANPTAAIANAYDMVLNGYEVGGGSVRIHNGEMQQTVF 500

Query: 289 E----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E Q+++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 RILGIDEQQQREKFG--------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|317181930|dbj|BAJ59714.1| aspartyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 577

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 395 DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIE 454

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 455 CEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----NEEEAQKKFGFLL 510

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 511 EALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 69/219 (31%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +  + R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALTARNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S   +M    ++++   +              N     + ++  EA   Y 
Sbjct: 231 QIDAEMSFCSENDVMGVVEDLLQEIFKAIGH----------NISKPFKRMSYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNAIFSNIAQDPKNKRI 319


>gi|197284982|ref|YP_002150854.1| aspartyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|238693144|sp|B4ETP3|SYD_PROMH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194682469|emb|CAR42399.1| aspartyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 594

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 71/207 (34%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +     F+++++  L   +P     ++            
Sbjct: 130 RRPEMSQRLKTRAKITSFVRRFMDGEGFLDVETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +I             + ++          +T AEA  RY   D     +  + 
Sbjct: 244 VREVMERMIHAL----------WLDILNVDLGAFPVMTFAEAMRRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   L    + +    A +D    + 
Sbjct: 293 IDIADLVKNVEFSVFAQAANDEKCRVI 319



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 13/135 (9%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +    + E+ E    ++        P   +               +++     E+     
Sbjct: 430 VIDFPMFEEDEDTGSLSAMHHPFTSPKDLTPAELTAHPVGAVANAYDMVINGYEVGGGSV 489

Query: 277 ELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
            +     Q+  F        ++++K            L  L    P  +G+A G DRLVM
Sbjct: 490 RIHRNEMQQAVFSILGITPDEQREKFG--------FLLDALKFGTPPHAGLAFGLDRLVM 541

Query: 332 LVTGANNINEVIWTP 346
           L+TG +NI +VI  P
Sbjct: 542 LLTGTDNIRDVIAFP 556


>gi|225429171|ref|XP_002271358.1| PREDICTED: similar to tRNA synthetase class II (D, K and N) family
           protein [Vitis vinifera]
 gi|297736395|emb|CBI25118.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 21/190 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQ 69
            RR+     ++ R+ +   +R Y  + + F+EI++  L   +P     ++     +    
Sbjct: 203 LRRQQMNSNIMLRHRVVKLIRRYLEDIHGFVEIETPILSRSTPEGARDYLVPSRVQPGTF 262

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
             + +      SP+   + L+ +G +K +  A  +R+ +     QPEFT L+   A    
Sbjct: 263 YALPQ------SPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQPEFTQLDMELAFTPL 316

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E +++   ++IR                     +    +T AEA +RY +       D  
Sbjct: 317 EDMLRLNEDLIRQVFLEIKG---------IQLPNPFPRLTYAEAMSRYGSDRPDLRFDLE 367

Query: 190 DQPDRHLLYL 199
            +    +   
Sbjct: 368 LREVSDVFSE 377



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 50/153 (32%), Gaps = 19/153 (12%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A + G+    D +   I         E N        L  +P       ++        
Sbjct: 489 IAHELGL---VDHSRHSILWVTDFPMFEWNSAEQRLEAL-HHPFTAPNPEDMEDLSSARA 544

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL 313
             +++    +E+      +     Q    E      ++ + K     E   +        
Sbjct: 545 LAYDMVYNGVEIGGGSLRIFKREVQEKVLEIVGISPEQAEAKFGYLLEALDM-------- 596

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DRLVML+ GAN+I +VI  P
Sbjct: 597 -GAPPHGGIAYGLDRLVMLLAGANSIRDVIAFP 628


>gi|307610179|emb|CBW99730.1| aspartyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 580

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 80/228 (35%), Gaps = 29/228 (12%)

Query: 4   IPSQPWW-NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
           +P      N D  Y+ R            L  R+ + S +R Y  E  F++I++  L   
Sbjct: 98  LPDDHQIINEDLRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKA 157

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G +K +     +R+ +  
Sbjct: 158 TPEGARDYLVPSRVHPGQFYALPQ------SPQLFKQLLMMSGFDKYYQIVRCFRDEDLR 211

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT L+   A  + E +++    ++         KI   + +N     +   ++ 
Sbjct: 212 ADRQPEFTQLDIEMAFINEEDILQLIEGLL---------KIVFKEILNITLPDKLPRMSY 262

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            EA  RY   D     +  +  D   L           A +D    + 
Sbjct: 263 KEAMTRY-GSDKPDLRNPLELIDIADLVKDCDFNVFASAANDNSGRVV 309



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 49/145 (33%), Gaps = 7/145 (4%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           +        +    + E    +  +         P   SA            K +++   
Sbjct: 410 INSGWQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAETLRSKPTQTLAKAYDIVIN 469

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYN-ETYPIDEDFLACL-TEMPQSSGIAMG 325
             E+      +  P  Q+  F+        I   E +      L  L    P   GIA+G
Sbjct: 470 GYEIGGGSIRIHQPELQKTVFD-----LIGIDEQEAHEKFGFLLDALQYGAPPHGGIALG 524

Query: 326 FDRLVMLVTGANNINEVIWTPFSQS 350
            DRL ML+T + +I +VI  P +Q+
Sbjct: 525 IDRLAMLLTDSTSIRDVIAFPKTQT 549


>gi|291617759|ref|YP_003520501.1| AspS [Pantoea ananatis LMG 20103]
 gi|291152789|gb|ADD77373.1| AspS [Pantoea ananatis LMG 20103]
          Length = 592

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 76/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S    + +   + R            L  R  I S +R +  +  F++I++  L   
Sbjct: 109 PLDSNQTNSEEARLKYRYLDLRRPEMVERLKTRAKITSFVRRFMDDAGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    +IR   +                  E   +T 
Sbjct: 223 ADRQPEFTQIDVETSFLTAPQVREIMERMIRELWQSVKGVDLG----------EFPQMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     ++ +  D   L    +        +D    +
Sbjct: 273 AEAMHRY-GSDKPDLRNSMELVDVGDLLKTVEFQVFSGPANDEKGRV 318



 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 54/148 (36%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            +++  D  W+ ++        E    G+         P   SA              ++
Sbjct: 416 DLQITDDKAWAPLWVVDFPMFEEDDEGGLAAMHHPFTAPKEMSAEQLAADPTQAVANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           +     E+      + +   Q+  F     +E ++++K            L  L    P 
Sbjct: 476 MVINGYEVGGGSVRIHNGNMQQTVFSILGIEEHEQREKFG--------FLLDALKYGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRL ML+TG +NI +VI  P
Sbjct: 528 HAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|227824345|ref|ZP_03989177.1| aspartyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904844|gb|EEH90762.1| aspartyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 596

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 64/172 (37%), Gaps = 17/172 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +   +R++     F+EI++  L + +P     ++            
Sbjct: 136 RRPEMQRNLILRHKVTKLVRDFMDNQGFLEIETPMLCKSTPEGARDYLVPSRVNPGKFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F  A  +R+ +     QPEFT L+   +    + 
Sbjct: 196 LPQ------SPQLFKQILMVAGMEKYFQIARCFRDEDLRADRQPEFTQLDMEMSFIDEDD 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +M    N+I    + A  K                 +T  +A  +Y +    
Sbjct: 250 IMTLTENLIAYVFKNALGKELQ---------VPFGRMTWDDAMDQYGSDKPD 292



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 50/160 (31%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +       ++ +    + E  E              P  E     +   
Sbjct: 411 ALRLEMGKRLNLIDPDKLAFTWVVKFPMFEYSEEEHRYVAMHHPFTSPCDEDVDKLLTDP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
              + K +++    +E+      + D   Q   FE           +        L    
Sbjct: 471 GHVYAKAYDMVLNGVEIGGGSIRIHDRTVQNKVFEAIGLT----DEQAQEKFGFLLNAFE 526

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A G DRL+ML+    +I +VI  P +QS  +
Sbjct: 527 FGAPPHGGLAFGLDRLIMLMAKRPSIRDVIAFPKTQSAVD 566


>gi|52841708|ref|YP_095507.1| aspartyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|62287535|sp|Q5ZVG2|SYD_LEGPH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52628819|gb|AAU27560.1| aspartyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 593

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 80/228 (35%), Gaps = 29/228 (12%)

Query: 4   IPSQPWW-NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
           +P      N D  Y+ R            L  R+ + S +R Y  E  F++I++  L   
Sbjct: 111 LPDDHQIINEDLRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKA 170

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G +K +     +R+ +  
Sbjct: 171 TPEGARDYLVPSRVHPGQFYALPQ------SPQLFKQLLMMSGFDKYYQIVRCFRDEDLR 224

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT L+   A  + E +++    ++         KI   + +N     +   ++ 
Sbjct: 225 ADRQPEFTQLDIEMAFINEEDILQLIEGLL---------KIVFKEILNITLPDKLPRMSY 275

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            EA  RY   D     +  +  D   L           A +D    + 
Sbjct: 276 KEAMTRY-GSDKPDLRNPLELIDIADLVKDCDFNVFASAANDNSGRVV 322



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 7/145 (4%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           +        +    + E    +  +         P   SA A          K +++   
Sbjct: 423 INSGWQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTLAKAYDIVIN 482

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYN-ETYPIDEDFLACL-TEMPQSSGIAMG 325
             E+      +  P  Q+  F+        I   E +      L  L    P   GIA+G
Sbjct: 483 GYEIGGGSIRIHQPELQKTVFD-----LIGIDEQEAHEKFGFLLDALQYGAPPHGGIALG 537

Query: 326 FDRLVMLVTGANNINEVIWTPFSQS 350
            DRL ML+T + +I +VI  P +Q+
Sbjct: 538 IDRLAMLLTDSTSIRDVIAFPKTQT 562


>gi|219669604|ref|YP_002460039.1| aspartyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219539864|gb|ACL21603.1| aspartyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 592

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 58/188 (30%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+ +   +R +F    F EI++  L   SP     ++            
Sbjct: 135 RRPEMQQVFKIRHQVTQVMRNFFDSQGFYEIETPMLIKSSPEGARDYLVPSRVHPGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G EK F     +R+ +     QPEFT L+   +    E 
Sbjct: 195 LPQ------SPQIFKQLLMVSGMEKYFQIVRCFRDEDLRADRQPEFTQLDVEMSFAEVED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +    +                 +T  EA   Y   D        + 
Sbjct: 249 ILPMMEELMARIFKETIGRDIP---------RPFPRMTYQEAMELY-GSDKPDIRFGMEM 298

Query: 192 PDRHLLYL 199
            D      
Sbjct: 299 VDVAECVK 306



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 17/166 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL     ++ G+       +  +    L++  E +            P  E         
Sbjct: 408 HLRLELGKRLGLIPEDALNFLWVTEFPLLQWDEEDKRFVAIHHPFTSPMTEDLPLLPTEP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                K +++     EL      +     Q   F+      +E + K             
Sbjct: 468 GKVRAKAYDMVLNGTELGGGSIRIHQREVQEQMFDLLGLTPEEAKAKFG----------Y 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            L       P   GIA G DRL+ML+TG +NI +VI  P +QS  +
Sbjct: 518 LLDAFEYGTPPHGGIAFGLDRLIMLLTGKDNIRDVIAFPKTQSASD 563


>gi|15602848|ref|NP_245920.1| aspartyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431885|sp|P57895|SYD_PASMU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|12721309|gb|AAK03067.1| AspS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 588

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 69/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  E+ F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDEHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T AEA  R+   D     +  + 
Sbjct: 245 VREIMEKMVHGLWRETLGVDLG----------KFPVMTFAEAMRRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + +        +D    I
Sbjct: 294 VDVADLLKEVEFKVFNGPANDPNGRI 319



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 52/157 (33%), Gaps = 14/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ +              P   S        
Sbjct: 409 ALRLKLGRDLGLTKLEEWQPLWVIDFPMFERDDEGDLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  +++     E+      + DP  Q+  F      E ++++K            L
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGINEAEQREKFG--------FLL 519

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 520 DALKFGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 556


>gi|317491783|ref|ZP_07950218.1| aspartyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920217|gb|EFV41541.1| aspartyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 596

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 70/207 (33%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I + +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQRLKTRARITAFVRRFMDNHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMSAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    + R            +Q +      +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEELARSL----------WQEIKGVDLGKFPVMTFAEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   L             +D    + 
Sbjct: 293 VDVADLVKDVDFKVFSGPANDPKGRVI 319



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 14/154 (9%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFEL 264
           +++ ++D+W+ ++        +    G+         P   S               +++
Sbjct: 417 LKLTNEDSWAPLWVIDFPMFEDDGEGGLAAMHHPFTAPRDISPAELKAHPVGAIANAYDM 476

Query: 265 YACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
                E+      + +   Q   F      E +++ K            L  L    P  
Sbjct: 477 VMNGYEVGGGSVRIHNGEMQETVFGILGITEQEQRDKFG--------FLLDALKYGTPPH 528

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           +G+A G DRLVML+TG +NI +VI  P + +  +
Sbjct: 529 AGLAFGLDRLVMLLTGTDNIRDVIAFPKTTAAAD 562


>gi|332654810|ref|ZP_08420552.1| aspartate--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332516153|gb|EGJ45761.1| aspartate--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 599

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 65/190 (34%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +  R+ +    R+YF E  F+EI++  L   +P     ++            
Sbjct: 138 RRPDMQHAIATRHKVTKICRDYFDEQGFLEIETPMLTKSTPEGARDYLVPSRVHPGKFYA 197

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +  + + 
Sbjct: 198 LPQ------SPQQYKQLLMLSGFDRYMQIARCFRDEDLRADRQPEFTQIDLEMSFVNEDD 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M      ++   +            + +  +    +   EA  R+   D        + 
Sbjct: 252 VMGIQEGFLKRVFKEVL---------DVDVQTPFLRMPWREAMDRF-GSDKPDLRFGFEL 301

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 302 KDISDIVKDC 311



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 50/162 (30%), Gaps = 9/162 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q G+    D  +  +    + E  E              P  E         
Sbjct: 413 ALRCECAKQLGLLDPKDFKFLWVTEFPMFEYSEEEGRYVAMHHPFTAPMDEDLDKLETDK 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                K +++     EL      +  P  Q+  F      +       +        +  
Sbjct: 473 KNCRAKAYDIVLNGTELGGGSIRISVPETQQAMF------RALGFSDEDAQERFGHLINA 526

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                P   G+A G DRL ML+ GA +I +VI  P  Q+  E
Sbjct: 527 FKFGAPPHGGLAYGLDRLCMLMAGAESIRDVIAFPKVQNASE 568


>gi|54294481|ref|YP_126896.1| aspartyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|62287531|sp|Q5WWA3|SYD_LEGPL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|53754313|emb|CAH15790.1| Aspartyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 593

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 79/228 (34%), Gaps = 29/228 (12%)

Query: 4   IPSQPWW-NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
           +P      N D  Y+ R            L  R+ + S +R Y  E  F++I++  L   
Sbjct: 111 LPDDHQVINEDLRYKYRYIDLRRAVMQKKLTLRHKLNSCIRNYLNEQNFLDIETPMLTKA 170

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G +K +     +R+ +  
Sbjct: 171 TPEGARDYLVPSRVHPGQFYALPQ------SPQLFKQLLMMSGFDKYYQIVRCFRDEDLR 224

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT L+   A  + E +++    ++         KI   + +N     +   +  
Sbjct: 225 ADRQPEFTQLDIEMAFINEEDILQLIEGLL---------KIVFKEILNITLPDKLPRMPY 275

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            EA  RY   D     +  +  D   L           A +D    + 
Sbjct: 276 KEAMTRY-GSDKPDLRNPLELIDIADLVKNCDFNVFASAANDNSGRVV 322



 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 7/145 (4%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           +        +    + E    +  +         P   SA A          K +++   
Sbjct: 423 INSGWQLLWVVDWPMFELDPQSNKLQPMHHPFTSPQELSAEALRSKPTQTLAKAYDIVIN 482

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYN-ETYPIDEDFLACL-TEMPQSSGIAMG 325
             E+      +  P  Q+  F+        I   E +      L  L    P   GIA+G
Sbjct: 483 GYEIGGGSIRIHQPELQKTVFD-----LIGIDEQEAHEKFGFLLDALQYGAPPHGGIALG 537

Query: 326 FDRLVMLVTGANNINEVIWTPFSQS 350
            DRL ML+T + +I +VI  P +Q+
Sbjct: 538 IDRLAMLLTDSTSIRDVIAFPKTQT 562


>gi|52424763|ref|YP_087900.1| aspartyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|62287543|sp|Q65UP5|SYD_MANSM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52306815|gb|AAU37315.1| AspS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 590

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 68/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +I             + N       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMEKMIHGL----------WLNTINVDLGKFPVMTWTEAMQRF-GSDKPDLRNPLEI 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +             +D    +
Sbjct: 294 TDVADIVKDVDFKVFSGPANDPNGRV 319



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 56/187 (29%), Gaps = 17/187 (9%)

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            +  +       +   D   T  +     R       +   +          +    + E
Sbjct: 382 FDRTSAQTGDILFFGADKWQTATDALGALR---LKLGRDLALTQLDQWAPLWVIDFPMFE 438

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           + E              P   S               +++     E+      + DP  Q
Sbjct: 439 RDEEGNLAAMHHPFTS-PKDFSPEQLEADPTGAVANAYDMVINGYEVGGGSVRIFDPKMQ 497

Query: 285 RHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           +  F      E Q+++K            L  L    P  +G+A G DRL ML+TG +NI
Sbjct: 498 QTVFRILGIDEQQQREKFG--------FLLDALKFGTPPHAGLAFGLDRLTMLLTGTDNI 549

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 550 RDVIAFP 556


>gi|302793741|ref|XP_002978635.1| hypothetical protein SELMODRAFT_418417 [Selaginella moellendorffii]
 gi|300153444|gb|EFJ20082.1| hypothetical protein SELMODRAFT_418417 [Selaginella moellendorffii]
          Length = 531

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 81/283 (28%), Gaps = 26/283 (9%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   +P +L  S +   +    A    ++ F   +R  +     H  EF M+E   A   
Sbjct: 263 DFFGRPAFLTVSGQLQAETYACA-LSNVYTFGPTFRAEQSHTSRHLAEFLMVEPELAFAE 321

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            +  M    + ++   +    + +    +        + +T + A  R  N+        
Sbjct: 322 LKDDMDCAEDYVKFMCQWLLDRCYDDIKLMD------DKLTESGALERLQNVVSAPFARI 375

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SA 247
                  +L                W    +      +           +  YP    + 
Sbjct: 376 TYTQAIEMLKEV---KDFTFDTPVEWGMDLASEHERYLAEQ-LFQKPVFVYDYPKAIKAF 431

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID- 306
              +            L     EL               R E+             P+D 
Sbjct: 432 YMRVNDDGQTVAAMDMLVPKVGELVGGSQREERYEVLVQRLEEL----------ELPLDS 481

Query: 307 -EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            E +L        + SG  +GF+R+++ VTG  NI +VI  P 
Sbjct: 482 YEWYLDLRRYGSVKHSGFGLGFERMLLFVTGLENIRDVIPFPR 524


>gi|58266942|ref|XP_570627.1| asparagine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57226860|gb|AAW43320.1| asparagine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 532

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/382 (13%), Positives = 113/382 (29%), Gaps = 51/382 (13%)

Query: 4   IPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNET 57
           +P+    + + H R R       +  R+ +     ++F  + F+ + +  L  S      
Sbjct: 153 LPASVLRD-NAHLRFRTSQTAAVMRIRDALARDWHDWFESHDFVHVHTPILTGSDCEGAG 211

Query: 58  HIRAFSTELIIQDHIRK------PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-G 110
            +                     P++L  S +    +       + +  + ++R      
Sbjct: 212 EVFTIVDHPPPSSSSSPQPFFPHPVHLTVSAQLHL-EAPTHALSRTYTLSPSFRAEPSLT 270

Query: 111 CLHQPEFTMLEWYRAHE-SYEQLMKDCMNIIRCAAEVA--NQKIFSFQNVNCNPFSEPEY 167
             H  EF MLE   A E   + L+      ++         +K       + +  ++   
Sbjct: 271 SRHLSEFHMLEAEVAWENDLDGLLSVVEEGVKSTVGNILNGEKRGKRLRDDLSIVAKSLR 330

Query: 168 I-----TVAEAFARYAN-------IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
                 +V +    +A+       +               LL      +   ++    W 
Sbjct: 331 DVDDLGSVIDPAQEFADPLYHLQLVMDKPFTRITYTSALELLSSLHADSPSTISPPPLWG 390

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-----------IYPADPRFTKRFEL 264
              S    + +  +   N    + RYP                    + +     + F+L
Sbjct: 391 QGISTDHEKLLAAH--FNGPVFVTRYPKELKPFYMLPTPSTIENEKTHASQGSTVECFDL 448

Query: 265 -YACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIA 323
            +    E+           E  H  E+   +K++     + +D   L          G  
Sbjct: 449 LFPHWGEMAGGSLREHRLTELTHAIEEMGMKKEEYN---WYLD---LRK-YGSAPHGGWG 501

Query: 324 MGFDRLVMLVTGANNINEVIWT 345
           MG+DR V  VTG  N+ +V+  
Sbjct: 502 MGWDRWVGWVTGLGNVRDVVPY 523


>gi|307130883|ref|YP_003882899.1| aspartyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306528412|gb|ADM98342.1| aspartyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 596

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 68/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R      +               +   +T AEA  R+   D     +  + 
Sbjct: 244 VREVMEKLVRELWLEIHGVDLG----------DFPIMTFAEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 54/150 (36%), Gaps = 18/150 (12%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            +++ ++++W  ++        E    G+         P   S               ++
Sbjct: 416 DLKITNENSWQPLWVIDFPMFEEDGEGGLAAMHHPFTAPRDMSPTELEANPTAAIANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACLT-EM 316
           +     E+      +     Q+  F      E++ +EK              L  L    
Sbjct: 476 MVLNGYEVGGGSVRIHRGEMQQTVFRILGIDERQQREKFG----------FLLDALKFGT 525

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P  +G+A G DRLVML+TG +NI +VI  P
Sbjct: 526 PPHAGLAFGLDRLVMLLTGTDNIRDVIAFP 555


>gi|85858293|ref|YP_460495.1| bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA
           amidotransferase subunit C [Syntrophus aciditrophicus
           SB]
 gi|97196491|sp|Q2LPW5|SYD1_SYNAS RecName: Full=Aspartyl-tRNA synthetase 1; AltName:
           Full=Aspartate--tRNA ligase 1; Short=AspRS 1
 gi|85721384|gb|ABC76327.1| aspartyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 723

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 18/163 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ I   +RE+     F+E+++  L   +P     ++            
Sbjct: 165 RRPAMQKNLILRHRISQCVREFLDSRGFVEVETPVLTMSTPEGARDYLVPSRIHPRSFYA 224

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 225 LPQ------SPQLFKQLLMIGGMERYFQLARCFRDEDLRPNRQPEFTQLDIEASFIDEEF 278

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           L +    +      +                     +T AEA 
Sbjct: 279 LYELIEELTVRMFAIGG----------IALSRPFPRMTYAEAM 311



 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 28/126 (22%)

Query: 240 RYPAPESALANIYPADPRFTKR--------FELYACNIELCNACDELLDPIEQRHRF--- 288
            +P       +    DP   +         ++L     EL      + D   QR  F   
Sbjct: 481 HHPF---TAPDRTDFDPGNIEELLSLRSRAYDLVVNGEELGGGSIRINDREVQRRIFAAL 537

Query: 289 ---EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
              E++++ K             FL       P   G+A+G DR+V ++    +I EVI 
Sbjct: 538 GLTEEDVKNKFG----------FFLRAFDFAAPPHGGLALGMDRVVSMILQTPSIREVIA 587

Query: 345 TPFSQS 350
            P ++S
Sbjct: 588 FPKNRS 593


>gi|156387361|ref|XP_001634172.1| predicted protein [Nematostella vectensis]
 gi|156221252|gb|EDO42109.1| predicted protein [Nematostella vectensis]
          Length = 564

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/359 (12%), Positives = 100/359 (27%), Gaps = 62/359 (17%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
           Q+ ++    R     +   L  R+++    RE++ +  ++E+    +      G  T   
Sbjct: 247 QLDNRHIMLRGETLAK--ILRMRSVVTHCFREHYFDRGYVELTPPCMVQTQVEGGST--- 301

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   ++  +  +L  S +   +  + A    +FC A ++R  +     H  E   
Sbjct: 302 -----LFKFNYFGEDAFLTQSSQLYLETAIPA-LGDVFCIAESYRAEQSRTRRHLAETFD 355

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L  Y          +     I      A  ++                        R   
Sbjct: 356 LLIYL-------GTRPESCNIVAIYCQAINQVLKSHIPCSFCTDLSLRPRPVHKACRLRF 408

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +            +     L+ +   I    +   +D  +                 +L 
Sbjct: 409 LSTALFSRLISSINSETFTLKIRVNDIPEMPERKMTDQINE--------------PILLC 454

Query: 240 RYPAPE-SALANIYPADPRFTKRFELYACNI-------ELCNACDELLDPIEQRHRFEKE 291
           R+P    S        D R T+  +L    +             DEL++           
Sbjct: 455 RFPVEIKSFYMQKCDDDRRLTESVDLLMPGVGEIIGGSMRMWKYDELIEGY--------- 505

Query: 292 MQEKKKIYNET---YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              K++  +     +  D+             G  +G +R +  +    +I +V + P 
Sbjct: 506 ---KREGIDPAPYFWYTDQR----KYGSCPHGGYGLGLERFLTWLLNRQHIRDVCFYPR 557


>gi|116071892|ref|ZP_01469160.1| Aspartyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065515|gb|EAU71273.1| Aspartyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 610

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 62/186 (33%), Gaps = 16/186 (8%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      R    L  R       R +  +  FIE+++  L   +P      R +   
Sbjct: 129 RHRYLDLRRKRMNDNLRLRARTIQVARRFLEDEGFIEVETPVLTRSTPEG---ARDYVLP 185

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
             +         L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   +
Sbjct: 186 SRVCG--GDWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQPEFTQLDIEMS 243

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               EQ+++   ++I    +                      +T  +A  RY   D   T
Sbjct: 244 FMGEEQILQLNEDLICAIWKSVKG---------IELPRPFPRMTWHDAMERY-GTDRPDT 293

Query: 186 LDNPDQ 191
               + 
Sbjct: 294 RYGMEL 299



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 13/156 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +        +  F  ++   +    G         +P       ++     ++ 
Sbjct: 421 LAKELKLVQPDRQNDAWNFLWVVDFPMFEFNGDEDRYEALHHPFCAPNTDDLGSDPAQWA 480

Query: 260 --------KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
                   + ++L    +EL      + D   QR   +      +    E        + 
Sbjct: 481 TTLPSARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLE----EAQEQFGFLIN 536

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DR+VML+ G  +I + I  P
Sbjct: 537 ALDMGAPPHGGLAFGIDRMVMLLAGEESIRDTIAFP 572


>gi|290992025|ref|XP_002678635.1| asparaginyl-tRNA synthetase [Naegleria gruberi]
 gi|284092248|gb|EFC45891.1| asparaginyl-tRNA synthetase [Naegleria gruberi]
          Length = 588

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 115/359 (32%), Gaps = 47/359 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRA 61
           +  +    R    +    L  R++I    RE++    + EI   ++      G  T    
Sbjct: 255 LDQRHLILRG--EKTSAILKMRSIILQCFREHYYSRGYTEITPPTMVQTQVEGGST---- 308

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTML 120
               L   D+  +  YL  S +   + ++ A     FC A ++R  +     H  EFT +
Sbjct: 309 ----LFKFDYFGEDAYLTQSSQLYLETVIPA-LGDSFCIAQSYRAEKSDTPRHLSEFTHV 363

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE----PEYITVAEAFAR 176
           E  R   ++E L+    +++    E    K      V      +    P+ + +   F R
Sbjct: 364 EAERPFITFEDLLNTLEDLVCDVTERVLSKSQHLAVVGEETADKLVITPDAVKLKRPFKR 423

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
               D      N +           +           + D  +     K+   +G     
Sbjct: 424 MTYADCIEFCRNNEVYKDEETKELFE-----------FGDDITDAPERKMLEKIGE--PV 470

Query: 237 ILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ-- 293
           ++ ++P    +        +P  T+  ++    +       E++    +   ++K M   
Sbjct: 471 LMIKFPGDMKAFYMKRCEDEPTLTESVDVLLPGV------GEVIGGSMRLESYDKMMDGY 524

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANN-----INEVIWTPF 347
           +K+ I  E Y    D            G  +G +R ++ +    +     + +    P 
Sbjct: 525 KKEGISAEPYYWYSD--QRKYGTCPHGGYGLGLERYMLWLLKNEHNRVRTVRQTCLYPR 581


>gi|332981513|ref|YP_004462954.1| aspartyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699191|gb|AEE96132.1| aspartyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 595

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +    R++  +  FIE+++  L   +P     ++            
Sbjct: 141 RRPDMQRNLMLRHKVSKITRDFLSDEGFIEVETPMLTKSTPEGARDYLVPSRLHPGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQLFKQLLMISGFDKYFQIARCFRDEDLRADRQPEFTQIDLEMSFVDVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I    + A     S            + +T  EA  RY   D   T    + 
Sbjct: 255 VIALNEQLIARIFKDAIGMDIS---------LPLKRLTYKEAMERY-GSDKPDTRFGLEL 304

Query: 192 PD 193
            D
Sbjct: 305 KD 306



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 9/175 (5%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL   + + D+     L     + G R+   D        +    +          +   
Sbjct: 397 DLLLFVADKDEVVFDSLGQLRLELGKRLNLIDDSRYDLLWVTEFPLLEYSEEEKRYVAKH 456

Query: 241 YP--APESALANIYPADPRFTKR--FELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           +P  +P     ++  ++P   +   +++     E+      +     Q+  FE     K+
Sbjct: 457 HPFTSPMDEDISLLNSEPWKARAKAYDMVLNGNEIGGGSIRIHSTELQQKMFEVLGFSKE 516

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
               + +      L       P   G+A G DRLVML+ G + I +VI  P  Q+
Sbjct: 517 ----DAWERFGFLLKAFEYGAPPHGGMAYGLDRLVMLLAGLDTIRDVIAFPKVQN 567


>gi|322515237|ref|ZP_08068235.1| aspartate--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322118742|gb|EFX90948.1| aspartate--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 591

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 65/192 (33%), Gaps = 18/192 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R Y  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVPSRVHNGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +   N+I             + +       +   +T  E   R+ +            
Sbjct: 245 VRELMENMIHGL----------WLDRLNVDLGKFPMMTWQEVMQRFGSDKPDLRNPLELV 294

Query: 192 PDRHLLYLQAQQ 203
               +L     +
Sbjct: 295 DVADILKDVEFK 306



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 41/119 (34%), Gaps = 17/119 (14%)

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------ 288
                  P   +               +++     E+      + DP  Q+  F      
Sbjct: 448 MHHPFTSPKDLTPEELAANPVNAVANAYDMVINGYEVGGGSVRIYDPKMQQTVFSILGIN 507

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E+E QEK              L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 508 EEEQQEKFS----------FLLDALKFGTPPHAGLAFGLDRLTMLITGTENIRDVIAFP 556


>gi|259908215|ref|YP_002648571.1| aspartyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224963837|emb|CAX55339.1| Aspartyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478145|emb|CAY74061.1| aspS [Erwinia pyrifoliae DSM 12163]
          Length = 595

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +  F++I++  L   +P     ++            
Sbjct: 130 RRPEMANRLKARAKITSLVRRFMDDEGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R                          +T AEA  RY   D     +  + 
Sbjct: 244 VREIMERLVRNLWLDVKSVDLG----------AFPSMTFAEAMRRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLLKDLEFKVFSGPANDAKGRV 318



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S        +      +++     E+      + +   Q+  F
Sbjct: 441 EEGLTAMHHPFTAPKDMSPEQLKNAPETAIANAYDMVINGYEVGGGSVRIHNGQMQQTVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 GILGITEHEQREKFG--------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|138896140|ref|YP_001126593.1| aspartyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134267653|gb|ABO67848.1| Aspartyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 453

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 60/176 (34%), Gaps = 18/176 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLY 77
             L  R+ +  ++R +    +F+E+++  L   +P     ++            + +   
Sbjct: 3   QTLELRHKVAKAVRNFLDGERFLEVETPMLTKSTPEGARDYLVPSRVHPGEFYALPQ--- 59

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+  G E+ +     +R+ +     QPEFT ++   +    E ++    
Sbjct: 60  ---SPQIFKQLLMVGGFERYYQITRCFRDEDLRADRQPEFTQIDIEMSFVDQEDIIDLTE 116

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
            ++    +                      IT  EA +RY   D        +  D
Sbjct: 117 RMMAAVVKATKGIDIP---------RPFPRITYDEAMSRY-GSDKPDVRFGLELVD 162



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 53/175 (30%), Gaps = 17/175 (9%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL   + +        L     + G  +   D     F  +    +              
Sbjct: 253 DLLLFVADEKAIVAAALGALRLKLGKELGLIDETKLAFLWVTDWPLLEYDEEEGRYYAAH 312

Query: 241 YPAPESALANIY--PADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFE----KEM 292
           +P       +I     +P     + ++L     EL      + +   Q   F      + 
Sbjct: 313 HPFTMPVRDDIPLLETNPGAVRAQAYDLVLNGYELGGGSLRIFERDVQEKMFRALGFDQE 372

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + +++            L       P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 373 EARRQFG--------FLLEAFEYGTPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 419


>gi|317177552|dbj|BAJ55341.1| aspartyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 577

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 395 DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIE 454

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 455 CEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----NEEEAQKKFGFLL 510

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 511 EALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 67/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S   +M    ++++   +              +     + +   EA   Y 
Sbjct: 231 QIDAEMSFCSENDVMGVVEDLLQEIFKAIGH----------HISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGECFMDSSNAIFSNIAQDPKNKRI 319


>gi|242239588|ref|YP_002987769.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242131645|gb|ACS85947.1| aspartyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 601

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 68/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQRLKTRARITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R      N               +   +T AEA  R+   D     +  + 
Sbjct: 244 VREVMEKLVRELWLEINGVDLG----------DFPIMTFAEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLNDVDFKVFSGPANDPKGRV 318



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   +               +++     E+      +     Q+  F
Sbjct: 441 EGGLAAMHHPFTAPRDMAPSELAANPTAAIANAYDMVLNGYEVGGGSVRIHHGEMQQTVF 500

Query: 289 E----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E Q+++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 RILGIDEHQQREKFG--------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|326795232|ref|YP_004313052.1| aspartyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326545996|gb|ADZ91216.1| aspartyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 589

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 68/187 (36%), Gaps = 18/187 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  L  R+ + S LR +  EN F++I++  L   +P     ++    T       
Sbjct: 132 RRPEMQEKLRFRSKVTSVLRRHLDENGFLDIETPILTRATPEGARDYVVPSRTHQGSFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 192 LPQ------SPQLFKQMLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFMGEEA 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   ++I    +                  E   +  AEA   Y +      +    Q
Sbjct: 246 IMEMTESMIVSLFKELKDVDLG----------EFPRMPYAEAMETYGSDKPDLRIPLTIQ 295

Query: 192 PDRHLLY 198
               L+ 
Sbjct: 296 TVSDLME 302



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 57/187 (30%), Gaps = 13/187 (6%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT-WSDIFSRILIE 224
           E     +    +   D  T ++      R  L           A        +F  +   
Sbjct: 384 ERTDANDGDLIFFGADKATVVNEALGALRCKLGEDLNLYTCEWAPLWVVDFPMFEELPDG 443

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +      +  T     P    A           ++ +++     EL      +  P  Q
Sbjct: 444 GV--TAIHHPFTAPSCSPEELKANPV-----AALSQAYDMVLNGTELGGGSVRIHQPEMQ 496

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           +  FE           E        L  L    P   G+A G DRLVML+T + +I +VI
Sbjct: 497 QTVFELLNI----NEEEQQEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTDSASIRDVI 552

Query: 344 WTPFSQS 350
             P +QS
Sbjct: 553 AFPKTQS 559


>gi|148243537|ref|YP_001228694.1| aspartyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|166225439|sp|A5GWT2|SYD_SYNR3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|147851847|emb|CAK29341.1| Aspartyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 604

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 67/204 (32%), Gaps = 8/204 (3%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +      R R  L  R+    + R +  +  FIE+++  L   +P     ++     
Sbjct: 129 RHRYLDLRRERMRRNLSLRHQTVQTARRFLEDEGFIEVETPVLTRSTPEGARDYLVPSRV 188

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                    +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 189 ------CGGEWFALPQSPQLFKQLLMVGGLERYYQVARCFRDEDLRADRQPEFTQLDMEM 242

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    EQ++     +I    ++      S            E         RY    +G 
Sbjct: 243 SFLDQEQILDLNERLIGRIWKLVKGVELSLPLPRMTWHEAMERYGTDRPDTRYGMELVGV 302

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRV 208
           +    D   +      A    ++ 
Sbjct: 303 SDIVADMGFKVFSGAVAAGGSVKC 326



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 47/152 (30%), Gaps = 9/152 (5%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR--YPAPESALANIY--PAD 255
            A++  +  A    +  +    + E       +           P        ++     
Sbjct: 421 LAKELEMVPAEAWNFLWVVDFPMFEFNADENRLEALHHPFCAANPEDLGDDPALWSERLP 480

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + ++L    +EL      + D   Q    +     ++    E        L  L  
Sbjct: 481 TARAQAYDLVLNGLELGGGSLRIHDAALQNQVLQTIGLAQE----EAQEQFGFLLEALEM 536

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+VML+ G  +I + I  P
Sbjct: 537 GAPPHGGIAFGLDRMVMLLAGEESIRDTIAFP 568


>gi|78485235|ref|YP_391160.1| aspartyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|97196985|sp|Q31H87|SYD_THICR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78363521|gb|ABB41486.1| aspartyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 596

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 18/206 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +  R  +  S+R Y  +N F+++++  L   +P     ++    T       
Sbjct: 132 RREEMQSTMRTRYRVTRSMRRYLDDNGFMDMETPILTKSTPEGARDYLVPSRTHPNKFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT L+   +  + E+
Sbjct: 192 LPQ------SPQLFKQLLMMSGFDRYYQITRCFRDEDLRADRQPEFTQLDIETSFMTEEE 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                K    + V+ N   +   +T AEA  +Y  ID          
Sbjct: 246 VMNM---------MEGLTKTIFREGVDVNFEDDFPRMTYAEAIEKY-GIDRPDLRIPLQL 295

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L              D    +
Sbjct: 296 VDVADLLQDIDFKVFAGPAKDPMGRV 321



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 58/194 (29%), Gaps = 11/194 (5%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI-----RVAHDDTWSDIF 218
           +       E   R    D        D        L A +  I      +  +     + 
Sbjct: 373 KFFPDQAMEIMQRVGAEDGDIVFFGADNAKIVNEALGALRCKIGEDLDMIEKEWAPVWVV 432

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF-TKRFELYACNIELCNACDE 277
              + E  E    +         P   +     +    +  ++ ++L    IE+      
Sbjct: 433 DFPMFEMDEKTAKMTAIHHPFTQPKATTEEILNHDEPHQMLSRAYDLVINGIEVGGGSVR 492

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGA 336
           + D   Q        +       +        L  L    P  +G+A G DRLVML+   
Sbjct: 493 IHDTHMQAAVL----KMLGISDEDAQEKFGFLLNALKYGCPPHAGMAFGLDRLVMLMAKR 548

Query: 337 NNINEVIWTPFSQS 350
           ++I +VI  P +QS
Sbjct: 549 DSIRDVIAFPKTQS 562


>gi|119774978|ref|YP_927718.1| aspartyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166225425|sp|A1S6P2|SYD_SHEAM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119767478|gb|ABM00049.1| aspartyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 591

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 73/206 (35%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R  + S +R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAQRLIFRAKVTSFVRRFMDGNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSDQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +IR                      +   +T  EA  R+   D     +  + 
Sbjct: 246 VMETTERMIRNLFLEL----------MNVDLGDFPKMTWDEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    + A      +D    +
Sbjct: 295 VDVADLLKAVEFAVFSGPANDEEGRV 320



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKR 261
           +AG      +        +     E   G           P   +A           +  
Sbjct: 414 KAGEDFKLLEGEWRPLWVVDFPMFEKADGRFYAVHHPFTAPRGVTAAELEASPGKAVSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           +++    +EL      + +   Q   F     +      E        L  L    P  +
Sbjct: 474 YDMVLNGVELGGGSVRIHNGDMQSTVFRILGID----DEEAKEKFGFLLDALRFGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DRLVML+TGA++I +V+  P
Sbjct: 530 GLAFGLDRLVMLMTGASSIRDVMAFP 555


>gi|321258873|ref|XP_003194157.1| asparagine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317460628|gb|ADV22370.1| Asparagine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 600

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 103/332 (31%), Gaps = 39/332 (11%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
            +  R +   +LRE F + +  E+    + Q S    + +  F       D+     YL 
Sbjct: 296 VMRFRALFLRALRESFHKRRITEVTPPCMVQTSVEGGSTLFEF-------DYYGSKAYLT 348

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S +   + +L +    ++C   ++R  +     H  E+T LE   A  +++ L+    +
Sbjct: 349 QSSQLYLETVLPS-LGDVYCIQESFRAEKSLTRRHLSEYTHLEAELAFVNFKDLLDHIED 407

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +I    +       +           PE++     F R    D                 
Sbjct: 408 LICEVIDTLLADPIAS---EIIKNLNPEFVPPQRPFVRLDYCD---------------AI 449

Query: 199 LQAQQAGI--RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD- 255
               + GI      D    D  +     K+     IN   +L  +P    +       D 
Sbjct: 450 KYLNEHGIMREDGEDHVVGDDIAEAAERKMTDQ--INKPIMLINFPKALKSFYMKALEDA 507

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
           P FT+  ++    +       E++    +    E+ M   K+      P           
Sbjct: 508 PDFTESVDVLVPGV------GEVIGGSMRISDLEELMAGYKREDIPADPYYWFTDQRKYG 561

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +  G  +G +R +  +     + E    P 
Sbjct: 562 TAEHGGYGLGVERCLAWILKRYTVRECSLYPR 593


>gi|121999005|ref|YP_001003792.1| aspartyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|121590410|gb|ABM62990.1| aspartyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 617

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  L  R  + S++R +  +  F++I++  L   +P     ++    T       
Sbjct: 155 RRPEMQQRLQLRARVSSAIRRHLEDEGFLDIETPMLTRATPEGARDYLVPSRTHPGRFFA 214

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT L+   A    E 
Sbjct: 215 LPQ------SPQLFKQLLMMAGFDRYYQIVRCFRDEDLRADRQPEFTQLDMEAAFVDEEA 268

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R           S              +  AEA  RY +      +     
Sbjct: 269 VMGVTERMLRQLFRQVLGVELS---------DPFPRMRYAEAMDRYGSDKPDLRIPLELV 319

Query: 192 PDRHLLYL 199
               L+  
Sbjct: 320 EVGDLVRE 327



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 52/145 (35%), Gaps = 6/145 (4%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYA 266
           V        +    + E  E +  +         P  +  A      A+   ++ ++   
Sbjct: 446 VEDAWRPLWVVDFPMFEYDEKDGRLYSLHHPFTAPCVQDPAELQQQDAEALVSRAYDCVL 505

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMG 325
             +EL      + DP  Q+  F            E        L  L    P   GIA G
Sbjct: 506 NGVELGGGSIRIHDPDMQQAVFGVLGI----GEEEARSKFGFLLDALQYGCPPHGGIAFG 561

Query: 326 FDRLVMLVTGANNINEVIWTPFSQS 350
            DRLVML+ GA++I EV+  P +Q+
Sbjct: 562 MDRLVMLMAGADSIREVMAFPKTQT 586


>gi|71660150|ref|XP_821793.1| asparaginyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70887181|gb|EAN99942.1| asparaginyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 745

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/352 (15%), Positives = 106/352 (30%), Gaps = 44/352 (12%)

Query: 13  DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTEL 66
           D H   R       +  R+ +  + REY       E+   +L Q      + +       
Sbjct: 414 DRHLVLRGTYGSTTIKVRHELIRAFREYCWSVNMFEVTPPTLVQAECEGGSTLFDVI--- 470

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
               +     +L  S +    +   +    ++C   ++R  +     H  E+T LE   +
Sbjct: 471 ----YYGTTAHLTQSSQLYL-ETCTSSVGDVYCILPSYRAEKSKTRRHLSEYTHLEVEYS 525

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
              +E  +    ++I  A     +     +  +   F  PE +       +    D    
Sbjct: 526 ICDFELFLSKLEDLIVGAFNRTIE-----RAGDLIAFMNPEQL----VDPKANPFDPNNW 576

Query: 186 LDNPDQPDRHLLYLQAQQA-------GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
              P +P R L Y  A +                 + D  +      +   LG      +
Sbjct: 577 KFAPKKPFRRLKYADAIKLCNDNGILNPETNAPFQFGDDITDQPERAMVAILGE--MVFM 634

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKK 296
             +PA   S      P DP  T+  ++ A  I E+      + D  E           +K
Sbjct: 635 THFPAVMKSFYMARDPEDPTLTESVDVLAPGIGEIVGGSMRMWDHEELIE-----AYRRK 689

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +    Y     +            G  +G +R ++ +   +++ E    P 
Sbjct: 690 DLDPSVYY---WYTEQRKYGSTPHGGFGLGMERFLVWLLNLDSVREACLFPR 738


>gi|327394178|dbj|BAK11600.1| aspartyl-tRNA synthetase AspS [Pantoea ananatis AJ13355]
          Length = 592

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 75/227 (33%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S    + +   + R            L  R  I S +R +  +  F++I++  L   
Sbjct: 109 PLDSNQTNSEEARLKYRYLDLRRPEMVERLKTRAKITSFVRRFMDDAGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    +IR   +                  E   +T 
Sbjct: 223 ADRQPEFTQIDVETSFLTAPQVREIMERMIRELWQSVKGVDLG----------EFPQMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    +        +D    +
Sbjct: 273 AEAMHRY-GSDKPDLRNPMELVDVGDLLKTVEFQVFSGPANDEKGRV 318



 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 54/148 (36%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            +++  D  W+ ++        E    G+         P   SA              ++
Sbjct: 416 DLQITDDKAWAPLWVVDFPMFEEDDEGGLAAMHHPFTAPKEMSAEQLAADPTQAVANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           +     E+      + +   Q+  F     +E ++++K            L  L    P 
Sbjct: 476 MVINGYEVGGGSVRIHNGNMQQTVFSILGIEEHEQREKFG--------FLLDALKYGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRL ML+TG +NI +VI  P
Sbjct: 528 HAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|227355386|ref|ZP_03839787.1| aspartyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227164610|gb|EEI49481.1| aspartyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 581

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 71/207 (34%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +     F+++++  L   +P     ++            
Sbjct: 117 RRPEMSQRLKTRAKITSFVRRFMDGEGFLDVETPMLTKATPEGARDYLVPSRVHKGKFYA 176

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 177 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAEQ 230

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +I             + ++          +T AEA  RY   D     +  + 
Sbjct: 231 VREVMERMIHAL----------WLDILNVDLGAFPVMTFAEAMRRY-GSDKPDLRNPMEL 279

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   L    + +    A +D    + 
Sbjct: 280 IDIADLVKNVEFSVFAQAANDEKCRVI 306



 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 13/135 (9%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +    + E+ E    ++        P   +               +++     E+     
Sbjct: 417 VIDFPMFEEDEDTGSLSAMHHPFTSPKDLTPAELTAHPVGAVANAYDMVINGYEVGGGSV 476

Query: 277 ELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
            +     Q+  F        ++++K            L  L    P  +G+A G DRLVM
Sbjct: 477 RIHRNEMQQAVFSILGITPDEQREKFG--------FLLDALKFGTPPHAGLAFGLDRLVM 528

Query: 332 LVTGANNINEVIWTP 346
           L+TG +NI +VI  P
Sbjct: 529 LLTGTDNIRDVIAFP 543


>gi|194387516|dbj|BAG60122.1| unnamed protein product [Homo sapiens]
          Length = 299

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/321 (15%), Positives = 102/321 (31%), Gaps = 40/321 (12%)

Query: 32  LREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
            R++F +  + E+   +L      G  T        L   D+  +  +L  S +   +  
Sbjct: 7   FRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFLTQSSQLYLETC 58

Query: 90  LAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           L A    +FC A ++R  +     H  E+T +E      +++ L+    +++    +   
Sbjct: 59  LPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDLVCDVVDRIL 117

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
           +          NP  +P                    ++  D       +   ++ G   
Sbjct: 118 KSPAGSIVHELNPNFQPPKRPF-------------KRMNYSDAIVWLKEHDVKKEDGTFY 164

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFE-LYA 266
              +   +   R++         IN   +L R+P    S      P D R T+  + L  
Sbjct: 165 EFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDSRLTESVDVLMP 218

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGF 326
              E+      + D  E    ++     ++ I    Y    D            G  +G 
Sbjct: 219 NVGEIVGGSMRIFDSEEILAGYK-----REGIDPTPYYWYTD--QRKYGTCPHGGYGLGL 271

Query: 327 DRLVMLVTGANNINEVIWTPF 347
           +R +  +    +I +V   P 
Sbjct: 272 ERFLTWILNRYHIRDVCLYPR 292


>gi|119899528|ref|YP_934741.1| aspartyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166225317|sp|A1KAJ9|SYD_AZOSB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119671941|emb|CAL95855.1| AspS protein [Azoarcus sp. BH72]
          Length = 599

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 67/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R  +  + R +     FI++++  L   +P     ++            
Sbjct: 131 RRPQMQKNLMLRYKVAMAFRRFLDGAGFIDVETPMLTKSTPEGARDYLVPSRVHP----- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 186 -GQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQVDIETSFLNETE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   + +               S    +T AEA  RY +      +     
Sbjct: 245 ITALMEEMIRFVFKESLGVDLP---------SPFPRMTYAEAMRRYGSDKPDLRVTLELT 295

Query: 192 PDRHLLYLQAQQ 203
               L+   A +
Sbjct: 296 EVTDLMKDVAFK 307



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 43/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G           +    + E  E +     C      P  E         
Sbjct: 410 ALRIKLGHEKGYVTGDAWRPLWVVDFPMFEYDEDDKRWTACHHPFTSPKDEHVELLKTNP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                K ++L     E+      +     Q   FE           E        L  L 
Sbjct: 470 GECLAKAYDLALNGWEIGGGSVRIHRADVQATVFEALNI----GAEEQQVKFGFLLDALK 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DR+V ++ GA +I +VI  P
Sbjct: 526 FGAPPHGGLAFGLDRVVTMMAGAESIRDVIAFP 558


>gi|119944470|ref|YP_942150.1| aspartyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166225379|sp|A1SST6|SYD_PSYIN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119863074|gb|ABM02551.1| aspartyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 592

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 72/209 (34%), Gaps = 28/209 (13%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S    + +   R R            +  R  + S +R +  +  F+++++  L   
Sbjct: 109 PLDSNQQNSEEQRLRYRYLDLRRPEMAKRMQFRAKVSSFVRRFLDDQDFLDVETPILTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++    T       + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRTHKGKFFALPQ------SPQLFKQLLMMSGMDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  + +Q+M+    +I    +                      +T 
Sbjct: 223 ADRQPEFTQIDIETSFMNADQVMEISEEMIVKLFKEMLNVDLGN----------FPKMTY 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           AEA  R+ +      +D        L+  
Sbjct: 273 AEALRRFGSDKPDLRIDFELYDVADLMKD 301



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 46/135 (34%), Gaps = 7/135 (5%)

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP--RFTKRFELYACNIELC 272
                 I     EP        +   + AP         A+P    +  +++     EL 
Sbjct: 424 WKPLWVIDFPMFEPLDDGGLTPLHHPFTAPIGLTVEELEANPVGAISNAYDMVLNGCELG 483

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVM 331
                +     Q   F    +  K    E        L  L    P  +G+A G DRLVM
Sbjct: 484 GGSVRIHKQDMQAAIF----RILKISDEEAEDKFGFLLEALKYGAPPHAGLAFGLDRLVM 539

Query: 332 LVTGANNINEVIWTP 346
           L+TG ++I +VI  P
Sbjct: 540 LMTGTSSIRDVIAFP 554


>gi|311031529|ref|ZP_07709619.1| aspartyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 590

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 72/203 (35%), Gaps = 28/203 (13%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R            L  R+ +  S+RE+  + QF+E+++  L   +P     +
Sbjct: 122 NEDIRLKYRYLDLRRPVMFDTLKMRHDVTRSIREFLNDQQFMEVETPILTKSTPEGARDY 181

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT
Sbjct: 182 LVPSRVHPGEFYALPQ------SPQIFKQLLMVSGVERYYQIARCFRDEDLRADRQPEFT 235

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S E+++    +++R   +                      IT  +A  RY 
Sbjct: 236 QVDIETSFLSQEEIIGMMEDMMRMVMKNTKSVDVPET---------FPRITYQDAMNRY- 285

Query: 179 NIDLGTTLDNPDQPDRHLLYLQA 201
             D   T    +  D        
Sbjct: 286 GSDKPDTRFEMELVDLSEQVADC 308



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 46/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+       +  +    L+E  E              P  E         
Sbjct: 409 ALRMKLGKELGLIDESKFNFLWVTDWPLLEYDEEAGRYFAAHHPFTMPVREDLPLLETNP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L     EL      + +   Q   F      K+    E        L    
Sbjct: 469 SEVRAQAYDLVLNGYELGGGSLRIYERDIQEKMFAVLGFSKE----EATEQFGFLLEAFE 524

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 525 YGTPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 557


>gi|222055750|ref|YP_002538112.1| aspartyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254781734|sp|B9M1C9|SYD_GEOSF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221565039|gb|ACM21011.1| aspartyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 593

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 52/159 (32%), Gaps = 17/159 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+  G+   +   +  I    L+E  E              P  E         
Sbjct: 414 KLRNQLAKILGLLDKNTFNFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLEYVENDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K ++L     E+      +     Q   F      E++ + K             
Sbjct: 474 GRCRAKAYDLVLNGNEIGGGSIRIHQEKVQSLMFKMLGLSEEDAKAKFG----------F 523

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P   GIA G DRL+ML+TG+++I +VI  P
Sbjct: 524 LLDALEYGTPPHGGIAFGLDRLIMLLTGSDSIRDVIAFP 562



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 76/214 (35%), Gaps = 26/214 (12%)

Query: 9   WWNRDFHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
              +  +   RRP L    + R+ +    R+Y   N F+E+++  L   +P      R F
Sbjct: 131 LRLKHRYLDLRRPVLQDNLILRSKVAQVTRQYLTGNGFLELETPFLTKSTPEG---ARDF 187

Query: 63  STELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                I        Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++
Sbjct: 188 LVPSRINRG---EFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQPEFTQID 244

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    E ++     +I            S            + +T AE+  R+  +D
Sbjct: 245 CEMSFIDREDIITVMEGLIARIFADVKDMSVS---------LPIKRMTYAESINRF-GVD 294

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
                   +  +   L    + +G +V  D    
Sbjct: 295 NPDLRFGLELVE---LSDIVKGSGFKVFADVVAG 325


>gi|332673584|gb|AEE70401.1| aspartate--tRNA ligase [Helicobacter pylori 83]
          Length = 577

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 395 DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTEYGYHAAHHPFTMPKNIE 454

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 455 CEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----NEEEAQKKFGFLL 510

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 511 EALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 547



 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 67/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S   +M    ++++   +              +     + +   EA   Y 
Sbjct: 231 QIDAEMSFCSENDVMGVVEDLLQEIFKAIGH----------HISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFMDSSNAIFSNIAQDPKNKRI 319


>gi|320160675|ref|YP_004173899.1| aspartyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319994528|dbj|BAJ63299.1| aspartyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 593

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 67/188 (35%), Gaps = 16/188 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              R +  L+ R+ +   +R+Y  +  FIE+++  L + +P     ++        +   
Sbjct: 132 RRERMQRNLILRHKVVKFIRDYLDQQGFIEVETPILFKTTPEGARDYLVPSRVHPGMFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT L+   +    + 
Sbjct: 192 LPQ------SPQQLKQLLMVSGVDRYFQIARCFRDEDLRGDRQPEFTQLDLEMSFVQRDD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +                       S    +T  EA  RY   D        + 
Sbjct: 246 VLNMVEGLFTAMIPAVA-------PHKRLLSSPWPKLTYREAVERY-GTDKPDLRFGMEL 297

Query: 192 PDRHLLYL 199
            D   ++ 
Sbjct: 298 HDCSAIFA 305



 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 15/146 (10%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           ++ +    + E  E     +        P  E             +  +++     E+ +
Sbjct: 426 FAWVVDFPMFEWNEEEKKWDAAHHPFTMPKMEDLDKFDTDPASILSDAYDMVCNGYEMAS 485

Query: 274 ACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFD 327
               +     Q   F      E+++Q K     E +             P   G+A G D
Sbjct: 486 GSIRIHRRDIQFKIFQLLGLKEEDIQRKFGHMLEAFE---------YGAPPHGGMAPGID 536

Query: 328 RLVMLVTGANNINEVIWTPFSQSNQE 353
           RLVML+    NI EVI  P +Q+ ++
Sbjct: 537 RLVMLLADEPNIREVIAFPKNQAARD 562


>gi|157364498|ref|YP_001471265.1| aspartyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166979994|sp|A8F7R7|SYD_THELT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157315102|gb|ABV34201.1| aspartyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 585

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 79/213 (37%), Gaps = 23/213 (10%)

Query: 4   IPSQPWWNRDFH--YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET 57
           +P++    +  +   RR+     ++ R+ +   +R Y  +N FIE+++  L   +P    
Sbjct: 113 LPAEEIRLKYRYIDLRRKEVSDRIITRHKVTQCIRNYLSKNGFIEVETPFLTKSTPEG-- 170

Query: 58  HIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
             R F     ++       Y L  SP+   + L+  G ++ F     +R+ +     QPE
Sbjct: 171 -ARDFLVPSRLK---PGTFYALPQSPQLFKQLLMIGGIDRYFQVVRCFRDEDLRADRQPE 226

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT ++   +  + + +++    +I+   +   Q              + + +T  E   +
Sbjct: 227 FTQIDIEMSFNTMDDVLEITEGMIKHLFKEVLQVDLP---------GKLDRLTYNECMNK 277

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
           Y   D        +  D    +   +   I   
Sbjct: 278 Y-GSDKPDRRIGMEFFDLSKHFKTCEYHAINAE 309



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 49/156 (31%), Gaps = 20/156 (12%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR---- 257
           +  G R   D         +    +          +   +P     L ++          
Sbjct: 405 KILGERYFSDLRKGFDIFWVTDFPMFEYSEEENRFVAQHHPFTMPNLDDLKKYKNSDLSK 464

Query: 258 -FTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFL 310
              + +++     E+ +    + D   QR  F      E+E++ K     E +       
Sbjct: 465 IRAQSYDIVINGFEVGSGSIRIHDAELQREIFKLMRLTEEEVKLKFGFLLEAFQ------ 518

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 P   GIA+G DRL  ++ G   I EVI  P
Sbjct: 519 ---YGAPPHGGIALGLDRLTAIICGVPTIREVIAFP 551


>gi|302805645|ref|XP_002984573.1| hypothetical protein SELMODRAFT_423731 [Selaginella moellendorffii]
 gi|300147555|gb|EFJ14218.1| hypothetical protein SELMODRAFT_423731 [Selaginella moellendorffii]
          Length = 531

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 80/283 (28%), Gaps = 26/283 (9%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   +P +L  S +   +    A    ++ F   +R  +     H  EF M+E   A   
Sbjct: 263 DFFGRPAFLTVSGQLQAETYACA-LSNVYTFGPTFRAEQSHTSRHLAEFLMVEPELAFAE 321

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            +  M    + ++   +    + +    +  +  +E   +   +            +   
Sbjct: 322 LKDDMDCAEDYVKFMCQWLLDRCYDDIKLMDDKLTESGALERLQNV---------VSAPF 372

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SA 247
                   + +  +           W    +      +           +  YP    + 
Sbjct: 373 ARITYTQAIEMLKEVKDFTFETPVEWGMDLASEHERYLAEQ-LFQKPVFVYDYPKAIKAF 431

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID- 306
              +            L     EL               R E+             P+D 
Sbjct: 432 YMRVNDDGQTVAAMDMLVPKVGELVGGSQREERYEVLVQRLEEL----------ELPLDS 481

Query: 307 -EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            E +L        + SG  +GF+R+++ VTG  NI +VI  P 
Sbjct: 482 YEWYLDLRRYGSVKHSGFGLGFERMLLFVTGLENIRDVIPFPR 524


>gi|291541881|emb|CBL14991.1| aspartyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 592

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 68/191 (35%), Gaps = 21/191 (10%)

Query: 16  YRRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RRRP L   + R+ I    R+YF +N F+EI++  +   +P     ++           
Sbjct: 138 LRRRPLLNNLMMRSKIAKVARDYFHDNGFVEIETPMMIKSTPEGARDYLVPSRIHNGKFY 197

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    +
Sbjct: 198 ALPQ------SPQIYKQLLMLSGFDRYIQLARCFRDEDLRADRQPEFTQIDMELSFVDVD 251

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++++      +   +                    + +T  EA   Y   D      +  
Sbjct: 252 EILEINEGFFKKLFKEVLNIDLEEH---------FQRMTYKEAMESY-GSDKPDIRFDMK 301

Query: 191 QPDRHLLYLQA 201
             D   L    
Sbjct: 302 IQDISDLVKDC 312



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 15/143 (10%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           I      E  E +            P  E              K ++L    +EL +   
Sbjct: 433 IVDFPFFEYDEESGEWLAMHHPFTMPKEECLQYLDTDPSKVIAKAYDLTLNGVELSSGSM 492

Query: 277 ELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLV 330
            + D   Q+  F+      +E++ K     E Y             P   G+ +G DR+ 
Sbjct: 493 RITDYELQQKMFKALKLTDEEIEAKFGFLVEAYK---------YGAPPHGGMGIGLDRVT 543

Query: 331 MLVTGANNINEVIWTPFSQSNQE 353
           ML+  A+++ +V   P  Q+  E
Sbjct: 544 MLMCKADSLRDVTAFPKVQNASE 566


>gi|225175513|ref|ZP_03729507.1| aspartyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225168842|gb|EEG77642.1| aspartyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 590

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 64/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ +    R++     F+E+++  L   +P     ++            
Sbjct: 135 RRPEMQQSMIMRHKVSKLTRDFLDGEGFLEVETPMLTRSTPEGARDYLVPSRVNPGSFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + ++ +G E+ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 195 LPQ------SPQLFKQLMMVSGAERYFQIARCFRDEDLRADRQPEFTQIDIELSFCDQEM 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    E    +            +    ++  EA  RY   D   T    + 
Sbjct: 249 ILGMMEGLMAHLFEGVLDEQIP---------TPFPRLSYREAMERY-GSDKPDTRFGMEL 298

Query: 192 PD 193
            D
Sbjct: 299 KD 300



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 13/150 (8%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +    L+   E              P  E        A     K 
Sbjct: 415 ERLGLIDKSKRNFLWVVDFPLLFWDEDEKRYVANHHPFTAPRDEDLDKLETEAQNVLAKA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFLACLT-EM 316
           ++L    +E+      +     Q   F+         +++            +       
Sbjct: 475 YDLVLDGVEIGGGSLRIYRREIQEQMFKLLGFTPESAREQFG--------FLMDAFEYGT 526

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   GIA G DRLVML+ G ++I +VI  P
Sbjct: 527 PPHGGIAFGLDRLVMLMAGKDSIRDVIAFP 556


>gi|298736310|ref|YP_003728836.1| aspartyl-tRNA synthetase (AspS) [Helicobacter pylori B8]
 gi|298355500|emb|CBI66372.1| aspartyl-tRNA synthetase (AspS) [Helicobacter pylori B8]
          Length = 577

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/351 (13%), Positives = 93/351 (26%), Gaps = 32/351 (9%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTEL 66
           + + D    R+P       I + +  +  EN  + +    LQ           + F    
Sbjct: 216 FRDEDLRADRQPEF---TQIDAEM-SFCDENDVMGVVEDLLQAIFKAIGHDISKPFK--- 268

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-------EFTM 119
            +        Y    P+   +         +      +R+                    
Sbjct: 269 RMPYKEAMENYGSDKPDLRFEL-------PLIEVGDCFRDSSNAIFSNIAQDPKNKRIKA 321

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAEAFARYA 178
           L    A   + + +   +                 +      P  +       +      
Sbjct: 322 LNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIKEDGIKGPLVKFLSEKGLKNILEKT 381

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCT 236
               G  +      D+ ++     +  ++VA   D    D  + + +             
Sbjct: 382 GAKTGDIV-FFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGY 440

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
               +P            +      +++    +EL      +     Q+  FEK      
Sbjct: 441 HAAHHPFTMPKNIECEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI--- 497

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 498 -HEEEVQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSIRDVIAFP 547



 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 65/219 (29%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQAIFKAIGHD----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFRDSSNAIFSNIAQDPKNKRI 319


>gi|53729050|ref|ZP_00134141.2| COG0173: Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208619|ref|YP_001053844.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|165976576|ref|YP_001652169.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|307246064|ref|ZP_07528146.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307250405|ref|ZP_07532352.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307255046|ref|ZP_07536864.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307259482|ref|ZP_07541207.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|166225314|sp|A3N1F3|SYD_ACTP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238687571|sp|B0BQ90|SYD_ACTPJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126097411|gb|ABN74239.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|165876677|gb|ABY69725.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|306852999|gb|EFM85222.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306857534|gb|EFM89643.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306861919|gb|EFM93895.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306866418|gb|EFM98281.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 591

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 18/192 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R Y  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVPSRVHNGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +   N+I             + +       +   +T  EA  R+ +            
Sbjct: 245 VRELMENMIHGL----------WLDRLNVDLGKFPIMTWQEAMQRFGSDKPDLRNPLELV 294

Query: 192 PDRHLLYLQAQQ 203
               +L     +
Sbjct: 295 DVADILKDVEFK 306



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 17/119 (14%)

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------ 288
                  P   +               +++     E+      + DP  Q+  F      
Sbjct: 448 MHHPFTSPKNLTPEELAANPVNAVANAYDMVINGYEVGGGSVRIYDPKMQQTVFGILGIN 507

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E++ QEK              L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 508 EQDQQEKFG----------FLLDALKFGTPPHAGLAFGLDRLTMLITGTENIRDVIAFP 556


>gi|332707194|ref|ZP_08427247.1| aspartyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332353928|gb|EGJ33415.1| aspartyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 595

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 66/189 (34%), Gaps = 18/189 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    +  R+ +   +R Y   E  FIE+++  L   +P     ++           
Sbjct: 136 RRDRMSKNVQLRHQVIRGIRRYLEDEQGFIEVETPVLTRSTPEGARDYLVPSRVNPGQWY 195

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E
Sbjct: 196 ALPQ------SPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSQE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++++    ++    +                      +T AEA  RY +    T      
Sbjct: 250 EILQLNETLVCHIFKTVKGIDIP---------RPFPRLTYAEAMERYGSDKPDTRFGLEL 300

Query: 191 QPDRHLLYL 199
                L+  
Sbjct: 301 VNVSDLMKD 309



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 41/130 (31%), Gaps = 5/130 (3%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              +    +              +P       ++        + ++L    +E+      
Sbjct: 436 LLWVTDFPMFEWNADEKRLEALHHPFTAPHPDDLDDLKTARAQAYDLVWNGVEIGGGSLR 495

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGA 336
           +  P  Q+  FE           E +      L       P   GIA G DRLVML+ G 
Sbjct: 496 IYQPEIQQQVFEAIGLS----EEEAHSKFGFLLEAFDYGAPPHGGIAYGLDRLVMLLAGE 551

Query: 337 NNINEVIWTP 346
            +I +VI  P
Sbjct: 552 ESIRDVIAFP 561


>gi|303253275|ref|ZP_07339424.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307248172|ref|ZP_07530200.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|302647957|gb|EFL78164.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306855349|gb|EFM87524.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 591

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 18/192 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R Y  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVPSRVHNGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +   N+I             + +       +   +T  EA  R+ +            
Sbjct: 245 VRELMENMIHGL----------WLDRLNVDLGKFPIMTWQEAMQRFGSDKPDLRNPLELV 294

Query: 192 PDRHLLYLQAQQ 203
               +L     +
Sbjct: 295 DVADILKDVEFK 306



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 17/119 (14%)

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------ 288
                  P   +               +++     E+      + DP  Q+  F      
Sbjct: 448 MHHPFTSPKNLTPEELAANPVNAVANAYDMVINGYEVGGGSVRIYDPKMQQTVFGILGIN 507

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E++ QEK              L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 508 EQDQQEKFG----------FLLDALKFGTPPHAGLAFGLDRLTMLITGTENIRDVIAFP 556


>gi|113954533|ref|YP_732041.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|113881884|gb|ABI46842.1| aspartyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 622

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 69/207 (33%), Gaps = 21/207 (10%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +      R    L  R     + R +  +  FIE+++  L   +P     +I     
Sbjct: 140 RHRFLDLRRKRMNDNLRLRAQTIQTARRFLEDEGFIEVETPVLTRSTPEGARDYILPSRV 199

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                    +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 200 ------CGGEWFALPQSPQLFKQLLMVGGIERYYQVARCFRDEDLRADRQPEFTQLDMEM 253

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    EQ+++    +I    +              +       +T  EA  RY   D   
Sbjct: 254 SFMGQEQILELNERLIAAIWKTIKG---------IDLPLPFPRLTWHEAMERY-GTDRPD 303

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHD 211
           T    +  +   +    +  G +V   
Sbjct: 304 TRYGMELTN---VSDIVKDMGFKVFSG 327



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 49/156 (31%), Gaps = 13/156 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+     +     F  ++   +              +P      +++      + 
Sbjct: 432 LAKEMGLVKPDRENDQWNFLWVVDFPMFEFNKDENRLEALHHPFCAPNTSDLGDKAEEWA 491

Query: 260 --------KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
                   + ++L    +EL      + D   QR               E        + 
Sbjct: 492 KTLPTARAQAYDLVLNGLELGGGSLRIHDSALQREVLNSIGLA----PEEAQEQFGFLVD 547

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DR+VML+ G ++I + I  P
Sbjct: 548 ALDMGAPPHGGLAFGVDRMVMLLAGEDSIRDTIAFP 583


>gi|33241301|ref|NP_876243.1| aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|46577199|sp|Q7V9I1|SYD_PROMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33238831|gb|AAQ00896.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 605

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 70/211 (33%), Gaps = 31/211 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R            L  R+ +  + R +  +  F+E+++  L   +P     ++ 
Sbjct: 125 ELRLRHRYLDLRKDRMTKNLRLRHEVLKTARNFLEQENFLEVETPILTRSTPEGARDYLV 184

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT L
Sbjct: 185 PSRVCEGDWFALPQ------SPQLFKQLLMVGGIERYYQIARCFRDEDLRSDRQPEFTQL 238

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S E+++     +I    +                      +T  E+  R+   
Sbjct: 239 DIEMSFMSQEEILGLTEKLISSIWKSVKGVDLV---------HPFPRLTWQESMDRF-GT 288

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
           D   T    +  +   +    +  G +V   
Sbjct: 289 DRPDTRYGMELKN---VSQILKGIGFKVFSG 316



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 15/95 (15%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEK-----EMQEKKKIYNETYPIDEDFLAC 312
             + ++L    +EL      + +P  Q    +      +  +K+             L  
Sbjct: 486 RAQAYDLVLNGLELGGGSLRIHNPDLQLTVLKTIGLPLQEAKKEFG---------FLLEA 536

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   G+A G DR+VML+ G  +I + I  P
Sbjct: 537 LEMGAPPHGGLAFGLDRIVMLLAGEESIRDTIAFP 571


>gi|90408547|ref|ZP_01216704.1| aspartyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310366|gb|EAS38494.1| aspartyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 589

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 73/203 (35%), Gaps = 28/203 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R            +  R+ + S +R +  +N F+++++  L   +P     ++ 
Sbjct: 119 EQRLRYRYLDLRRPEMAKRMQFRSKVSSFVRRFLEDNGFLDVETPILTKATPEGARDYLV 178

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T      +  +   L  SP+   + L+ +G +K +     +R+ +     QPEFT +
Sbjct: 179 PSRT------YKGQFFALPQSPQLFKQLLMMSGLDKYYQIVKCFRDEDLRADRQPEFTQI 232

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++M+    +I    +                      +T AEA  R+ + 
Sbjct: 233 DIETSFLSADEVMQKMEEMIVKLFQKMLDVDLGT----------FPKMTYAEAMRRFGSD 282

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQ 203
                +D        LL     +
Sbjct: 283 KPDLRIDFELVDVADLLTEVEFK 305



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 44/140 (31%), Gaps = 6/140 (4%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           V        +    + E +E   G+         P   +A           +  +++   
Sbjct: 420 VGSQWKPLWVIDFPMFEALED-GGLTPLHHPFTAPLNLTAKELEANPVGAISNAYDMVLN 478

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             EL      +     Q   F            E        L  L    P  +G+A G 
Sbjct: 479 GCELGGGSVRIHKADMQATIFRILNIS----DAEAQDKFGFLLEALKYGAPPHAGLAFGL 534

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DRLVML+T  ++I EVI  P
Sbjct: 535 DRLVMLMTKTSSIREVIAFP 554


>gi|296331701|ref|ZP_06874170.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675341|ref|YP_003867013.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151296|gb|EFG92176.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413585|gb|ADM38704.1| aspartyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 592

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 72/223 (32%), Gaps = 18/223 (8%)

Query: 11  NRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFS 63
            +  +   RRP     +  R+ +  ++R +  +N F++I++  L   +P     ++    
Sbjct: 128 LKHRYLDLRRPAMFQTMQMRHNVTKAVRSFLDDNGFLDIETPILTKSTPEGARDYLVPSR 187

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                   + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++  
Sbjct: 188 VHEGEFYALPQ------SPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQPEFTQIDIE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  S E +M    +++                               +   R+  +   
Sbjct: 242 MSFMSQEDIMSLAEDMMAKIMRETKGVELKLPLPRMTYDEAMNSYGSDKPDTRFDMLLTD 301

Query: 184 TTLDNPDQPDRHLLYLQA-----QQAGIRVAHDDTWSDIFSRI 221
            +    D   +      A     +   ++    D        +
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGGAGDYSRKDIDAL 344



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 19/172 (11%)

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCTILDRYPA 243
           L   D+ +     L A +  +         ++F+ +      +  +           +P 
Sbjct: 395 LFGADKFEVVAASLGALRLKLGKERGLIDENLFNFLWVIDWPLLEHDPEEGRFYAAHHPF 454

Query: 244 PESALAN----IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEK 295
                 +        +    + ++L     EL      + +   Q   F      + +  
Sbjct: 455 TMPVREDLELIETAPEDMKAQAYDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSQEEAA 514

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           ++            L       P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 515 EQFG--------FLLEAFEYGAPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 558


>gi|261749101|ref|YP_003256786.1| aspartyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497193|gb|ACX83643.1| aspartyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 574

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 79/230 (34%), Gaps = 12/230 (5%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ I    R +  +N F+EI++  L   +P      R+F     I    
Sbjct: 129 RRNPIKNNLILRHEISLETRNFLSKNGFLEIETPVLINQTPEGA---RSFVVPSRIHS-- 183

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+  G +K F  A  +R+ +     Q EFT ++   A      +
Sbjct: 184 GMFYALPQSPQLFKQLLMIGGIDKYFQIAKCFRDEDARSDRQIEFTQIDCEMAFVDVHDI 243

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    N I+   +    K    ++  C  +S    +   ++      +      +   + 
Sbjct: 244 LIFFENFIKHLFKKI--KNIELESFTCISYSNSMDLYGTDSPDLRFGMKFVKLNEWAQKK 301

Query: 193 DRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L  +    GI V        +    I+    EP +       +  +
Sbjct: 302 GIEFLKKKELTIGINVPKCSHYTCNQIYSIIEGIREPKINPEEIFWIKFF 351



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 48/155 (30%), Gaps = 8/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-APESALANIYP 253
            L    A    ++         I    L+E  E +            P   +  L +   
Sbjct: 399 KLRIEMAHHLNLKNPQVFKPLWIIDLPLLEWDEKSKRYKSFHHPFTSPIKEDIHLLDKKN 458

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-C 312
                TK +EL    +E+      + D   Q   F+           E+      FL   
Sbjct: 459 PGYIRTKSYELIINGMEIGGGSIRVHDKNIQDSIFKH--LGFSIKDIESEF---GFLTKA 513

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P   GIA G DRL+ ++ G  NI + I  P
Sbjct: 514 FEYGTPPHGGIAFGLDRLITILEGKENIKDFIAFP 548


>gi|85059235|ref|YP_454937.1| aspartyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|97196892|sp|Q2NTJ3|SYD_SODGM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84779755|dbj|BAE74532.1| aspartyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 596

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 23/206 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     L  R  I S +R +     F++I++  L   +P     ++            
Sbjct: 130 RRPVMAQRLKTRARISSFVRRFMDAEGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTATQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +IR                          +T A+A  R+   D     +  + 
Sbjct: 244 VREVMERLIRDLWREITGVDLGI----------FPQMTYADAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    Q     +  +D+   +
Sbjct: 293 VDVADLVKDVQFKVFSIPANDSQGRV 318



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 52/150 (34%), Gaps = 18/150 (12%)

Query: 212 DTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           D W+ ++        E    G+         P    A              +++     E
Sbjct: 423 DRWAPLWVVDFPMFEEDGEGGLAAMHHPFTAPKDVDAQMLAASPTSAVANAYDMVINGYE 482

Query: 271 LCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIA 323
           +      +     Q+  F      E+E QEK              L  L    P  +G+A
Sbjct: 483 VGGGSVRIHRGDMQQTVFGILAINEQEQQEKFG----------FLLDALKYGTPPHAGLA 532

Query: 324 MGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            G DRLVML+TG +NI +VI  P + +  +
Sbjct: 533 FGLDRLVMLLTGTDNIRDVIAFPKTTAAAD 562


>gi|221134423|ref|ZP_03560728.1| aspartyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 590

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 73/206 (35%), Gaps = 23/206 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     L+ R+ + +++R +  +  F++I++  L   +P     ++    T       
Sbjct: 130 RRPVMTERLVFRSKVTAAVRRFLEDQDFLDIETPILTKATPEGARDYLVPSRTHK----- 184

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G +K +     +R+ +     QPEFT ++        + 
Sbjct: 185 -GQFFALPQSPQLFKQLLMMSGMDKYYQIVKCFRDEDLRADRQPEFTQIDIETTFLDADG 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +IR             Q +      +   +T A+A   Y   D     +    
Sbjct: 244 VMAITEKMIRELF----------QTMLNVDLGDFPQMTYADAMRLY-GSDKPDLRNPLQI 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        +D    +
Sbjct: 293 IDVAQIMSSVEFKVFSGPANDPKGRV 318



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 6/154 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI-NCCTILDRYPAPESALANIYP 253
             L     + G     ++        +     E   G  +        P   +       
Sbjct: 404 EALGALRLKVGNDFELNEGDWRPLWVVDFPMFEEFDGQYHALHHPFTAPRDMTPEQLAAD 463

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                +  +++    +EL      +     Q   F+     K+    E        L  L
Sbjct: 464 PANALSNAYDMVLNGVELGGGSVRIHQQDMQATVFDILGISKE----EAQSKFGFLLEAL 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P  +G+A G DRLVML+T A +I +V+  P
Sbjct: 520 QYGTPPHAGLAFGLDRLVMLMTNATSIRDVMAFP 553


>gi|163847874|ref|YP_001635918.1| aspartyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|229470559|sp|A9WGJ7|SYD_CHLAA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|163669163|gb|ABY35529.1| aspartyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
          Length = 589

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 66/188 (35%), Gaps = 16/188 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R +  L+ R+ +   +R++     F+EI++  L   +P     ++            
Sbjct: 133 RRERMQRNLILRHRVVKFIRDFLDAEGFLEIETPILIKSTPEGARDYLVPSRLHPGKFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K F  A  +R+ +Q    QPEFT L+   +    + 
Sbjct: 193 LPQ------SPQQLKQLLMVAGYDKYFQIARCFRDEDQRADRQPEFTQLDMEMSFVDQDD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +                  + +  +    ++ AEA  RY +            
Sbjct: 247 VLDLIERMFTALCRTV--------VPHKHLPTPFRRLSYAEAMERYGSDKPDLRYGLELV 298

Query: 192 PDRHLLYL 199
               LL  
Sbjct: 299 NLSDLLIE 306



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 48/158 (30%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +   +   ++ I    L+E  E     +        P  E         
Sbjct: 409 KLRRNLAERLQLADPNTLCFAWIVDFPLVEWNEDEQRWDAVHHPFTAPKDEDMHLLATDP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K ++L     E       +     Q+  F      E+  Q +     E +     
Sbjct: 469 GKVRAKAYDLILNGYEAGGGSIRIHRRDVQQQIFSLLGISEELAQAQFGHMLEAFE---- 524

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   GIA G DRLVM++     I EV+  P
Sbjct: 525 -----YGAPPHGGIAPGIDRLVMILADEPTIREVMAFP 557


>gi|331701368|ref|YP_004398327.1| aspartyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128711|gb|AEB73264.1| aspartyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 595

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +L RN I  S+  YF +N FI+I++ +L   +P     ++            
Sbjct: 134 RRPEMQKNILLRNRIIQSIHSYFDQNDFIDIETPTLTKSTPEGARDYLVPSRVYPGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E+
Sbjct: 194 LPQ------SPQQFKQLLMGAGFDKYYQIARCYRDEDLRGDRQPEFTQIDMEMSFADQEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +       I                +  +     + +   E+ ARY   D        + 
Sbjct: 248 IEDVTEGFIA---------KVMKDAMGIDVQLPFKRMDWDESMARY-GTDQPDVRFGMEL 297

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 298 KDLSDIMK 305



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 12/137 (8%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIY-------PADPRFTKRFELYACNIE 270
           F  I+   +          +   +P       +++            + + +++    +E
Sbjct: 428 FLWIVNWPLFDWDVDLKRYVAAHHPFTMPNEDDVHYLMNEGEDPHKAYAQSYDIILNGLE 487

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           L      +     Q   FE     K+    E       FL  L    P   G+A+G DR 
Sbjct: 488 LGGGSIRIHTRALQEKMFEALGFTKESA--EAQF--GYFLNALDYGFPPHGGLAIGLDRF 543

Query: 330 VMLVTGANNINEVIWTP 346
           V L+   +NI +VI  P
Sbjct: 544 VRLLADRDNIRDVIAFP 560


>gi|190150477|ref|YP_001969002.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307257203|ref|ZP_07538975.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|307261631|ref|ZP_07543299.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307263821|ref|ZP_07545426.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|238692343|sp|B3GY37|SYD_ACTP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189915608|gb|ACE61860.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306864365|gb|EFM96276.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306868754|gb|EFN00563.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306870810|gb|EFN02549.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 591

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 18/192 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R Y  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVPSRVHNGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +   N+I             + +       +   +T  EA  R+ +            
Sbjct: 245 VRELMENMIHGL----------WLDRLNVDLGKFPIMTWQEAMQRFGSDKPDLRNPLELV 294

Query: 192 PDRHLLYLQAQQ 203
               +L     +
Sbjct: 295 DVADILKDVEFK 306



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 17/119 (14%)

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------ 288
                  P   +               +++     E+      + DP  Q+  F      
Sbjct: 448 MHHPFTSPKNLTPEELAANPVNAVANAYDMVINGYEVGGGSVRIYDPKMQQTVFGILGIN 507

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E++ QEK              L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 508 EQDQQEKFG----------FLLDALKFGTPPHAGLAFGLDRLTMLITGTENIRDVIAFP 556


>gi|308070356|ref|YP_003871961.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305859635|gb|ADM71423.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 592

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 68/230 (29%), Gaps = 17/230 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R+      R++    +F+E+++  L   SP     ++            
Sbjct: 134 RRPEMYQTLKLRSKAAKIFRDFLDGEEFVEVETPILTKSSPEGARDYLVPSRVHEGEFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 194 LPQ------SPQLYKQLLMVGGLERYYQIARCFRDEDLRADRQPEFTQVDIETSFMQQDD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L+     ++    +                 +  + IT AEA  +Y +            
Sbjct: 248 LLPMMERLMVKLFKETVGVELE---------TPFQRITHAEAMDKYGSDKPDLRFGLELI 298

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               ++     +    V        + +             +      RY
Sbjct: 299 NVNDIVATSGVKVFASVIEKGGEVKVLNAKGCGTWSRKDIDDLGPYAARY 348



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 47/160 (29%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+   +   ++ +    L+   E              P  E         
Sbjct: 407 ALRLKIGRHLGLIDDNKFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKDEDLGLLDTDP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+           E        L    
Sbjct: 467 GQVRAQAYDIVLNGYEVGGGSMRIYKRDVQEKMFKALNLA----PEEVTDKFGYLLDAFE 522

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA GFDRLVML+ G  N+ E I  P + S  +
Sbjct: 523 YGTPPHGGIAFGFDRLVMLLAGRTNLRETIAFPKTASATD 562


>gi|297520290|ref|ZP_06938676.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 57

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              +E    DED++  L   +P ++G+ +G DR++ML T ++ I +VI  P  +  +
Sbjct: 1   AGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPAMRPQK 57


>gi|303250101|ref|ZP_07336303.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307252787|ref|ZP_07534678.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302651164|gb|EFL81318.1| aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306859819|gb|EFM91841.1| Aspartyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 591

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 18/192 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R Y  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAEKLKTRAKITSFVRRYMDDNGFLDIETPMLTKATPEGARDYLVPSRVHNGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +   N+I             + +       +   +T  EA  R+ +            
Sbjct: 245 VRELMENMIHGL----------WLDRLNVDLGKFPIMTWQEAMQRFGSDKPDLRNPLELV 294

Query: 192 PDRHLLYLQAQQ 203
               +L     +
Sbjct: 295 DVADILKDVEFK 306



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 17/119 (14%)

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------ 288
                  P   +               +++     E+      + DP  Q+  F      
Sbjct: 448 MHHPFTSPKNLTPEELAANPVNAVANAYDMVINGYEVGGGSVRIYDPKMQQTVFGILGIN 507

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E++ QEK              L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 508 EQDQQEKFG----------FLLDALKFGTPPHAGLAFGLDRLTMLITGTENIRDVIAFP 556


>gi|315636219|ref|ZP_07891473.1| aspartate--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479580|gb|EFU70259.1| aspartate--tRNA ligase [Arcobacter butzleri JV22]
          Length = 591

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 73/231 (31%), Gaps = 31/231 (13%)

Query: 2   HQIPSQ----------PWWNRDFHYRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P               NR    R +        R+      R    E  F+++++  
Sbjct: 109 RPMPFDINDEKVNDEIKLRNRFLELRSKKSFDIFQLRSKATIQARNTLDELGFLDVETPI 168

Query: 49  LQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
           L   +P     ++            + +      SP+   + L+ AG +K F  A  +R+
Sbjct: 169 LTKSTPEGARDYLVPSRVHAGEFYALPQ------SPQLFKQLLMVAGFDKYFQIAKCFRD 222

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
            +     QPEFT ++   +  + E ++K    +I        + + S             
Sbjct: 223 EDLRADRQPEFTQIDVEMSFCNQEDVIKVAEKLIYDIFTKCGKNVPST----------FR 272

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
            +  +EA  +Y +       D P      +      +    +A D   + I
Sbjct: 273 RMKYSEAMEKYGSDKPDLRFDMPLVDVIDIFVNSTNEIFAEIAKDKKNNRI 323



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 14/158 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A +  I V  D           + ++E                 +  L NI   +   +
Sbjct: 414 LANEMNI-VPKDAYEFLWVVDFPMFEVEDGRTKALHHPFTMPNVEKYDLDNIEDLEEIES 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACL-T 314
             +++     EL      +     Q   F+     + + K+K            L  L  
Sbjct: 473 IAYDIVLNGTELGGGSIRIHKEEIQSKVFKLMGISQEEAKEKFG--------FLLDALSY 524

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             P   G A+G DR++ML+ G ++I +VI  P +Q  Q
Sbjct: 525 GAPSHGGFALGLDRMIMLLAGTDSIRDVIAFPKTQKAQ 562


>gi|222525749|ref|YP_002570220.1| aspartyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|254781724|sp|B9LJ78|SYD_CHLSY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222449628|gb|ACM53894.1| aspartyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 589

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 66/188 (35%), Gaps = 16/188 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R +  L+ R+ +   +R++     F+EI++  L   +P     ++            
Sbjct: 133 RRERMQRNLILRHRVVKFIRDFLDAEGFLEIETPILIKSTPEGARDYLVPSRLHPGKFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K F  A  +R+ +Q    QPEFT L+   +    + 
Sbjct: 193 LPQ------SPQQLKQLLMVAGYDKYFQIARCFRDEDQRADRQPEFTQLDMEMSFVDQDD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +                  + +  +    ++ AEA  RY +            
Sbjct: 247 VLDLIERMFTALCRTV--------VPHKHLPTPFRRLSYAEAMERYGSDKPDLRYGLELV 298

Query: 192 PDRHLLYL 199
               LL  
Sbjct: 299 NLSDLLIE 306



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 49/158 (31%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +   +   ++ I    L+E  E     +        P  E         
Sbjct: 409 KLRRNLAERLQLADPNTLCFAWIVDFPLVEWNEDEQRWDAVHHPFTAPKDEDMHLLATDP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K ++L     E       +     Q+  F      E++ Q +     E +     
Sbjct: 469 GKVRAKAYDLILNGYEAGGGSIRIHRRDVQQQIFSLLGISEEQAQAQFGHMLEAFE---- 524

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   GIA G DRLVM++     I EV+  P
Sbjct: 525 -----YGAPPHGGIAPGIDRLVMILADEPTIREVMAFP 557


>gi|157737027|ref|YP_001489710.1| aspartyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166979739|sp|A8ESW7|SYD_ARCB4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157698881|gb|ABV67041.1| aspartyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 589

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 73/231 (31%), Gaps = 31/231 (13%)

Query: 2   HQIPSQ----------PWWNRDFHYRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
             +P               NR    R +        R+      R    E  F+++++  
Sbjct: 107 RPMPFDINDEKVNDEIKLRNRFLELRSKKSFDIFQLRSKATIQARNTLDELGFLDVETPI 166

Query: 49  LQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
           L   +P     ++            + +      SP+   + L+ AG +K F  A  +R+
Sbjct: 167 LTKSTPEGARDYLVPSRVHAGEFYALPQ------SPQLFKQLLMVAGFDKYFQIAKCFRD 220

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
            +     QPEFT ++   +  + E ++K    +I        + + S             
Sbjct: 221 EDLRADRQPEFTQIDVEMSFCNQEDVIKVAEKLIYDIFTKCGKNVPST----------FR 270

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
            +  +EA  +Y +       D P      +      +    +A D   + I
Sbjct: 271 RMKYSEAMEKYGSDKPDLRFDMPLVDVIDIFANSTNEIFAEIAKDKKNNRI 321



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 14/158 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A +  I V  D           + ++E                 +  L NI   +   +
Sbjct: 412 LANEMNI-VPKDAYEFLWVIDFPMFEVEDGRTKALHHPFTMPNVEKYDLDNIEDLEEIES 470

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACL-T 314
             +++     EL      +     Q   F+     + + K+K            L  L  
Sbjct: 471 IAYDIVLNGTELGGGSIRIHKEEIQSKVFKLMGISQEEAKEKFG--------FLLDALSY 522

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             P   G A+G DR++ML+ G ++I +VI  P +Q  Q
Sbjct: 523 GAPSHGGFALGLDRMIMLLAGTDSIRDVIAFPKTQKAQ 560


>gi|66823901|ref|XP_645305.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74857802|sp|Q559M9|SYDC2_DICDI RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic 2; AltName:
           Full=Aspartate--tRNA ligase 2; Short=AspRS 2
 gi|60473358|gb|EAL71304.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 569

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/348 (13%), Positives = 111/348 (31%), Gaps = 42/348 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               ++ I +  R+  + N FIEI S  +     NE             ++  +  YL  
Sbjct: 238 IFKIQSAISNLFRDQLLINDFIEIHSPKIIKQSINE--------NSFKLNYFNEIAYLSE 289

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           S +F  +  + +  +++F     +R +      H  EFT L++    + +   + D ++ 
Sbjct: 290 STQFYRQLAIVSDFKRVFEIGPVYRTDLGHTHRHLNEFTSLDFEMTFKDHYHEVLDFLDN 349

Query: 140 IRCAAEVANQKIFSFQNVNCNPFS-EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +  +     +  +  +    N +  + E    +    R+   ++   L    + + +   
Sbjct: 350 LMISIFKILETNYENELKIINNYQLQFEKFKFSTKTPRFTFSEVKLMLIEFSENENNKFC 409

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           ++     + V  +  +  I        ++    ++   I       +         + + 
Sbjct: 410 MELFDY-LNVQEERIFGKI--------VKEKFNVDYYIIEKPSSEYQPFYIMPDSNNEKL 460

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE----------- 307
              F +Y    ++ +    + D      R++          N     +            
Sbjct: 461 LNSFHIYINGEKIGSGSQRIHDWKLLEKRYKNYYINHNNNNNNNNNNNNNNNNNNNNNNI 520

Query: 308 -------DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   F        Q +G ++G +RLVM   G  NI +  + P  
Sbjct: 521 ENYINIFKF-----GCSQHAGCSIGLERLVMAYLGLENIRKASFCPRD 563


>gi|269302446|gb|ACZ32546.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 584

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/431 (12%), Positives = 101/431 (23%), Gaps = 97/431 (22%)

Query: 16  YRRRPFLLK---RNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQD 70
            RR   + K   R+ +  + R +     F EI +  L + +P     ++           
Sbjct: 135 MRRGDIIEKMLCRHQVMLACRNFMDAQGFTEIVTPVLGKSTPEGARDYLVPSRIYPGKFY 194

Query: 71  HIRK--------------PLYLQTSPEF------------SCKKLLAAGEEKIFCFAHAW 104
            + +                Y Q +  F              +  +              
Sbjct: 195 ALPQSPQLFKQLLMVGGLDRYFQIATCFRDEDLRADRQPEFAQIDIEMSFGDTQDLFPII 254

Query: 105 RN-----------------GEQGCLHQPEFTMLE-----WYRAHESYEQLMKDCMNIIRC 142
                               +       +    +     +    +      K     I  
Sbjct: 255 EQLVATLFATQGIEIPLPLAKMTYQEAKDSYGTDKPDLRFDLKLKDCRDYAKRSSFSIFL 314

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--NIDLGTTLDNPDQPDRHLLYLQ 200
                   I  F        S  +     E   RY    +      +     +      +
Sbjct: 315 DQLAHGGTIKGFCVPGGATMSRKQLDGYTEFVKRYGAMGLVWIKNQEGKVASNIAKFMDE 374

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC------------------CTILDRYP 242
                +    D    DI   I   +   N  ++                      +  +P
Sbjct: 375 EVFHELFAYFDAKDQDILLLIAALESVANQSLDHLRRLIAKERELYSDNQYNFVWITDFP 434

Query: 243 ----------APESALANIYPADPRFTKR---------FELYACNIELCNACDELLDPIE 283
                     A           D    +          ++L     E+ +    + +P  
Sbjct: 435 LFSLEDGKIVAEHHPFTAPLEEDIPLLETDPLAVRSSSYDLVLNGYEIASGSQRIHNPDL 494

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q   F       K            F+  L+   P   GIA+G DRLVM++T A +I EV
Sbjct: 495 QSQIFT----ILKMSPESIQEKFGFFIKALSFGTPPHLGIALGLDRLVMVLTAAESIREV 550

Query: 343 IWTPFSQSNQE 353
           I  P +Q   +
Sbjct: 551 IAFPKTQKASD 561


>gi|300708164|ref|XP_002996267.1| hypothetical protein NCER_100652 [Nosema ceranae BRL01]
 gi|263511657|sp|C4V847|SYNC_NOSCE RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|239605554|gb|EEQ82596.1| hypothetical protein NCER_100652 [Nosema ceranae BRL01]
          Length = 447

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 106/349 (30%), Gaps = 45/349 (12%)

Query: 9   WWNRDFHYRRRPFLLK-RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTE 65
           + +     ++R F LK R+ +   +R+ F E  FIEI   ++      G  T        
Sbjct: 127 YGHLALRNKQRGFFLKARSSLLKIIRDIFYEGNFIEITPPTIVQTQVEGGST-------- 178

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYR 124
           L    +  K  YL  S +    + +A    + +C A ++R  +     H  E+T +E   
Sbjct: 179 LFKLKYYDKDAYLTQSSQLYL-ETVAPVAYRAYCIASSYRAEKSNTTRHLSEYTHVEAEL 237

Query: 125 A---HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
           A    E     ++  +                         + P+       F R   +D
Sbjct: 238 ANIEFEDLINNIEHLVTESIKRFYDLLGDEIKDLYPEIKLQNVPKR-----PFKRIRYVD 292

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCTILD 239
               L++                G++   D  +   D       + I    G     ++ 
Sbjct: 293 AIKFLNDE---------------GVKKDDDTDFVVGDDIPDSREKIICERFGKGEPVLMT 337

Query: 240 RYPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
            +            + +   T+ F+L    I         LD   +      +  +++ +
Sbjct: 338 HFLVEHKPFYMKLDSSNETCTESFDLLYPGIGEIVGGSMRLDNYNKL----IDGFKREGL 393

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             E    D              G  +GF+RL+M +    NI      P 
Sbjct: 394 NPE--DYDWYLDMARFGPCSHGGYGLGFERLLMALMRYTNIEFATLYPR 440


>gi|270262227|ref|ZP_06190499.1| hypothetical protein SOD_b04350 [Serratia odorifera 4Rx13]
 gi|270044103|gb|EFA17195.1| hypothetical protein SOD_b04350 [Serratia odorifera 4Rx13]
          Length = 594

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 68/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   N F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKTRAKITSFVRRFMDSNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    + R                      +   +T AEA  RY   D     +  + 
Sbjct: 244 VREVMEKLARDLWLDVKGVDLG----------DFPVMTFAEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDAKGRV 318



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 50/141 (35%), Gaps = 14/141 (9%)

Query: 212 DTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           D+W+ ++        E    G+         P   S               +++     E
Sbjct: 423 DSWAPLWVVDFPMFEEDGEGGLAAMHHPFTAPRDMSPEELNSAPTTAIANAYDMVINGYE 482

Query: 271 LCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMG 325
           +      +     Q+  F      E ++++K            L  L    P  +G+A G
Sbjct: 483 VGGGSVRIHRSEMQQTVFSILGINEHEQREKFG--------FLLDALKYGTPPHAGLAFG 534

Query: 326 FDRLVMLVTGANNINEVIWTP 346
            DRLVML+TG +NI +VI  P
Sbjct: 535 LDRLVMLLTGTDNIRDVIAFP 555


>gi|15618572|ref|NP_224858.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15836194|ref|NP_300718.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752378|ref|NP_444637.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|33242019|ref|NP_876960.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|6919974|sp|Q9Z7P2|SYD_CHLPN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|4376961|gb|AAD18801.1| Aspartyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189021|gb|AAF37971.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8979034|dbj|BAA98869.1| aspartyl tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|33236529|gb|AAP98617.1| aspartyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 584

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/431 (12%), Positives = 101/431 (23%), Gaps = 97/431 (22%)

Query: 16  YRRRPFLLK---RNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQD 70
            RR   + K   R+ +  + R +     F EI +  L + +P     ++           
Sbjct: 135 MRRGDIIEKLLCRHQVMLACRNFMDAQGFTEIVTPVLGKSTPEGARDYLVPSRIYPGKFY 194

Query: 71  HIRK--------------PLYLQTSPEF------------SCKKLLAAGEEKIFCFAHAW 104
            + +                Y Q +  F              +  +              
Sbjct: 195 ALPQSPQLFKQLLMVGGLDRYFQIATCFRDEDLRADRQPEFAQIDIEMSFGDTQDLLPII 254

Query: 105 RN-----------------GEQGCLHQPEFTMLE-----WYRAHESYEQLMKDCMNIIRC 142
                               +       +    +     +    +      K     I  
Sbjct: 255 EQLVATLFATQGIEIPLPLAKMTYQEAKDSYGTDKPDLRFDLKLKDCRDYAKRSSFSIFL 314

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--NIDLGTTLDNPDQPDRHLLYLQ 200
                   I  F        S  +     E   RY    +      +     +      +
Sbjct: 315 DQLAHGGTIKGFCVPGGATMSRKQLDGYTEFVKRYGAMGLVWIKNQEGKVASNIAKFMDE 374

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC------------------CTILDRYP 242
                +    D    DI   I   +   N  ++                      +  +P
Sbjct: 375 EVFHELFAYFDAKDQDILLLIAAPESVANQSLDHLRRLIAKERELYSDNQYNFVWITDFP 434

Query: 243 ----------APESALANIYPADPRFTKR---------FELYACNIELCNACDELLDPIE 283
                     A           D    +          ++L     E+ +    + +P  
Sbjct: 435 LFSLEDGKIVAEHHPFTAPLEEDIPLLETDPLAVRSSSYDLVLNGYEIASGSQRIHNPDL 494

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q   F       K            F+  L+   P   GIA+G DRLVM++T A +I EV
Sbjct: 495 QSQIFT----ILKISPESIQEKFGFFIKALSFGTPPHLGIALGLDRLVMVLTAAESIREV 550

Query: 343 IWTPFSQSNQE 353
           I  P +Q   +
Sbjct: 551 IAFPKTQKASD 561


>gi|218291279|ref|ZP_03495255.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218238827|gb|EED06039.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 600

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+    + R Y  ++ F+EI++  L   +P     ++     +      
Sbjct: 146 RRPEMQRIFALRHQAIRAFRRYLDDHGFLEIETPMLTKSTPEGARDYLVPSRLQPGEFYA 205

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    ++
Sbjct: 206 LPQ------SPQIFKQLLMVAGFERYYQVARCFRDEDLRADRQPEFTQLDIETSFLPKDE 259

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           LM    +++    +                      +   EA  +Y   D        + 
Sbjct: 260 LMSMMEDMMASVFKEVAG---------IEVPRPFLRLPYQEAMDKY-GSDKPDLRFGMEM 309

Query: 192 PDRHLLYL 199
            D   L+ 
Sbjct: 310 ADLADLFE 317



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 47/156 (30%), Gaps = 11/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           Q+ G+       +  +    L+   E              P  E              + 
Sbjct: 426 QELGLIDESQYRFLWVTDFPLLSWDEEEKRWVAEHHPFTMPREEDIPLLDTDPGRVRAQA 485

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY---NETYPIDEDFLACLT-EMP 317
           +++     E+      +     Q   F         +     E        L       P
Sbjct: 486 YDMVLNGYEIGGGSMRIYRRDVQEKMF-------AALGFSPEEAQEKFGFLLNAFEYGTP 538

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              GIA G DR++ML+TGA ++ +VI  P + S  +
Sbjct: 539 PHGGIAFGLDRIIMLLTGAKSLRDVIAFPKTASGTD 574


>gi|94968233|ref|YP_590281.1| aspartyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550283|gb|ABF40207.1| aspartyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 601

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 65/198 (32%), Gaps = 18/198 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +  R+ +  ++R Y     F+E+++  +   +P     ++            
Sbjct: 142 RRPEMQANVQMRHDVTFAIRNYLASQNFLEVETPIMTRSTPEGARDYLVPSRVHPGEFYA 201

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +  E+ F  A  +R+ +     QPEFT ++      + + 
Sbjct: 202 LPQ------SPQIFKQILMISNCERYFQIARCFRDEDLRADRQPEFTQIDLEMTFPTQDD 255

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +       +  A   A  K+            +   ++  +A  +Y        L   + 
Sbjct: 256 VFGVVEGFLTAAWAAAGHKLEG----------KFPRMSYDDAIRQYGIDKPDLRLPAMND 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
                     Q  GI + 
Sbjct: 306 VKSAFAAENLQTLGIDLD 323



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 47/141 (33%), Gaps = 9/141 (6%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYP--APESALANIYPADPR--FTKRFELYACNIELCN 273
           F  +           +       +P  +          +DP       +++     EL +
Sbjct: 440 FLWVTDFPFFEWDENDKRWNAAHHPFTSCHEEDMGKLESDPGGVRALAYDVVLNGTELGS 499

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVML 332
               +     Q   F+           E       FL  L    P   GIA+G DR+VM+
Sbjct: 500 GSIRIHRQDIQSIIFKSLG----MGPEEQQQRFGFFLEALQYGTPPHGGIALGLDRIVMI 555

Query: 333 VTGANNINEVIWTPFSQSNQE 353
           + GA ++ EVI  P + +  +
Sbjct: 556 LAGATSLREVITFPKTAAATD 576


>gi|94501012|ref|ZP_01307536.1| aspartyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94426759|gb|EAT11743.1| aspartyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 515

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 72/212 (33%), Gaps = 28/212 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           D   R R            L  R+ + + +R    E  F++I++  L   +P     ++ 
Sbjct: 48  DVRLRYRYMDLRRDEMQHNLRFRHKVTTQIRNILDEQGFLDIETPILTRATPEGARDYLV 107

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT +
Sbjct: 108 PSRTHQGSFFALPQ------SPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQI 161

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + +M    ++I+             Q        E  ++  +EA  +Y + 
Sbjct: 162 DMEASFVEEKDIMGAAESMIKQIF----------QTQKGIDLGEFPHMPYSEAMNKYGSD 211

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
                +         LL     +     A D 
Sbjct: 212 KPDLRIPMELVDVADLLQDIEFKVFAGPAKDP 243



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 18/183 (9%)

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
              N D+     + +      L     + G  +            +     E     +  
Sbjct: 314 EVKNGDIVFFGADKEVIVNEALGALRVKLGHDLNMLTCEWAPLWVVDFPMFEE--LEDGK 371

Query: 236 TILDRYP---APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-- 290
                +P      S            ++ +++     EL      + D   Q+  FE   
Sbjct: 372 LHAIHHPFTAPSCSPEELKANPTAALSRAYDMVLNGCELGGGSIRIHDQAMQQTVFEILN 431

Query: 291 --EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             E ++++K            L  L    P   G+A G DRL+ML+TG+ +I EVI  P 
Sbjct: 432 ISEEEQREKFG--------FLLDALQFGAPPHGGLAFGLDRLIMLMTGSESIREVIAFPK 483

Query: 348 SQS 350
           +QS
Sbjct: 484 TQS 486


>gi|291533404|emb|CBL06517.1| aspartyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 600

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 66/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ +   +R+YF E+ F+EI++  L   +P     ++            
Sbjct: 141 RRPEMQKNIMLRHRVTKLMRDYFDEHGFLEIETPMLTKSTPEGARDYLVPSRVNPGKFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F     +R+ +     QPEFT L+   +    + 
Sbjct: 201 LPQ------SPQIFKQLLMVAGYEKYFQIVRCFRDEDLRADRQPEFTQLDIEMSFVDQDY 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    E    +            +    +T  EA  RY   D        + 
Sbjct: 255 ILNLMEGLVSGLFEKTIGEKVQ---------TPFLRMTWDEAMERY-GSDKPDIRFGMEL 304

Query: 192 PDRHLLYL 199
            D      
Sbjct: 305 MDISEYVK 312



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+   ++  +  +    + E  E N            P  E         
Sbjct: 414 ELRLEMGRRRGLINENEYKFLWVVDFPMFEYDEENKRWKAMHHPFTAPRDEDVQYLTTDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                K +++    +E+      + +   Q   FE      ++  EK     + +     
Sbjct: 474 GRVKAKAYDMVLNGVEIGGGSLRIYNSDTQEKVFEAIGLTPEQAHEKFGFMLDAFK---- 529

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                   P   G+A G DR+VML+   N+I +VI  P +QS
Sbjct: 530 -----YGTPPHGGLAFGLDRMVMLMAKRNSIRDVIPFPKTQS 566


>gi|118356761|ref|XP_001011634.1| tRNA synthetases class II [Tetrahymena thermophila]
 gi|89293401|gb|EAR91389.1| tRNA synthetases class II [Tetrahymena thermophila SB210]
          Length = 551

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/338 (14%), Positives = 111/338 (32%), Gaps = 50/338 (14%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL---IIQDHIRK 74
           ++     ++ I    RE  +   FIEI +  +  S         F  E       D+   
Sbjct: 245 QQAIFRLKSSICQMFRENLLLQGFIEIHTPKIIQS---------FKKEYSDSFSLDYFGI 295

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN-GEQGCLHQPEFTMLEWYRAHESYEQLM 133
              L   P+F  +  + +  E++F     +R    +      EF  +      +   Q +
Sbjct: 296 DAQLSNFPKFYSQMAIQSDFERVFEIGPIYRKLHGRTHHTLCEFIGMNLEMEIKESYQEV 355

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
            D +  +  +  ++ + +F  +      +   + +                      +P 
Sbjct: 356 IDIVTDLLFSIFLSLEMMFQQELQIVKEYFPSQTL-------------------KIKKPV 396

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-Y 252
             + + +A      V +   + D  +++ + KI          I+ ++P+  S   +I  
Sbjct: 397 LQISFQEACSLLGEVQNQMDYLDNINQVKLSKIISQKYDTDFYIITQFPSISSNFMDIVC 456

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----ED 308
             +P +T  ++ +  N E+ +      DP+    R  +            Y ID    + 
Sbjct: 457 DEEPNYTYSYKFFLRNGEIASGSQRNHDPLSLEKRALQ------------YGIDINSIKK 504

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           ++  +        G  +G +RL++      NI +    
Sbjct: 505 YIDVISYGAYPHGGCCIGLERLILYYLDLQNIRKASLF 542


>gi|290475273|ref|YP_003468161.1| aspartate tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174594|emb|CBJ81388.1| aspartate tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 589

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 74/211 (35%), Gaps = 23/211 (10%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTEL 66
               +   R    L  R  + + +R +     F+++++  L   +P     ++       
Sbjct: 129 LRRPEMSLR----LKTRAKVTNFVRRFMDNAGFLDVETPMLTKATPEGARDYLVPSRVHK 184

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
                + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   + 
Sbjct: 185 GKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSF 238

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
            + EQ+ +   N+IR            + +       +   +T AEA  R+   D     
Sbjct: 239 MTAEQVREIMENMIREL----------WLDARNVDLGKFPIMTFAEAMRRF-GSDKPDLR 287

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +  +  D   L    + A      +D    +
Sbjct: 288 NPLELVDVADLVKNVEFAVFAEPANDPKGRV 318



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 49/141 (34%), Gaps = 19/141 (13%)

Query: 215 SDIFSRILIEKIEPNL--GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
                 I     E N   G++        P   SA    +  +      +++     E+ 
Sbjct: 425 WKPLWVIDFPMFEDNGEGGLHAMHHPFTSPCDMSATELEHDPESAIANAYDMVINGYEVG 484

Query: 273 NACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMG 325
                +     Q+  F      E+E QEK              L  L    P  +G+A G
Sbjct: 485 GGSVRIHRNEMQQVVFRILGITEEEQQEKFG----------FLLNALKYGTPPHAGLAFG 534

Query: 326 FDRLVMLVTGANNINEVIWTP 346
            DRLVML+T  +NI +VI  P
Sbjct: 535 LDRLVMLLTDTDNIRDVIAFP 555


>gi|67922351|ref|ZP_00515863.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Crocosphaera
           watsonii WH 8501]
 gi|67855802|gb|EAM51049.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Crocosphaera
           watsonii WH 8501]
          Length = 619

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 65/169 (38%), Gaps = 18/169 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +  ++R Y   E QF+EI++  L   +P     ++           
Sbjct: 157 RRDRMAKNLQLRHTVVKAIRRYLEDEQQFMEIETPILTRSTPEGARDYLVPSRVHPGQWY 216

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S  
Sbjct: 217 ALPQ------SPQLFKQLLMVSGCDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSEN 270

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++++    ++    +            N +       +T  ++  +Y N
Sbjct: 271 EILELNEGLVCSIFKTV---------KNIDLPRPFPRLTYKDSMEKYGN 310



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 42/130 (32%), Gaps = 5/130 (3%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I    +              +P     LA+I        + ++L    +E+      
Sbjct: 457 LLWITEFPMFEWNADEKRLEALHHPFTAPNLADIDDLSTARAQAYDLVYNGVEIGGGSLR 516

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           +     Q   FE      +    E Y      L       P   GIA G DRLVML+   
Sbjct: 517 IYQKDIQEKVFETIGLSLE----EAYNKFGFLLEAFEYGTPPHGGIAYGLDRLVMLLAKE 572

Query: 337 NNINEVIWTP 346
           ++I +VI  P
Sbjct: 573 DSIRDVIAFP 582


>gi|310767870|gb|ADP12820.1| aspartyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 595

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 73/227 (32%), Gaps = 29/227 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + S    + +   + R            L  R  I S +R +  +  F++I++  L   
Sbjct: 109 PLDSNQTNSEEARLKYRYLDLRRPEMANRLKVRAKITSLVRRFMDDEGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +  Q+ +    ++R                          +T 
Sbjct: 223 ADRQPEFTQIDVETSFMTAPQVREIMERLVRNLWLDVKSVDLG----------AFPSMTF 272

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           AEA  RY   D     +  +  D   L    +        +D    +
Sbjct: 273 AEAMRRY-GSDKPDLRNPMELVDVADLLKDIEFKVFSGPANDAKGRV 318



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   S        +      +++     E+      + +   Q+  F
Sbjct: 441 EEGLTAMHHPFTAPKDMSPEQLKNAPETAIANAYDMVINGYEVGGGSVRIHNGQMQQTVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                 E ++++K            L  L    P  +G+A G DRLVML+TG +NI +VI
Sbjct: 501 GILGISEHEQREKFG--------FLLDALKFGTPPHAGLAFGLDRLVMLLTGTDNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|42524682|ref|NP_970062.1| hypothetical protein Bd3311 [Bdellovibrio bacteriovorus HD100]
 gi|62287568|sp|Q6MI59|SYD_BDEBA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|39576892|emb|CAE78121.1| aspS [Bdellovibrio bacteriovorus HD100]
          Length = 642

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 73/197 (37%), Gaps = 21/197 (10%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-H 58
           M ++  +    R         L+ R+ +   +R +  +N F+E+++  L + +P     +
Sbjct: 164 MLRLKYRYLDLRSARLSSH--LITRHKVAQLVRRFLSDNGFLEVETPILYKSTPEGARDY 221

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEF+
Sbjct: 222 LVPSRVNPGHFYALPQ------SPQTLKQLLMISGYDRYFQIARCFRDEDLRADRQPEFS 275

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   ++   E +M+    ++R   +                      +T  EA  RY 
Sbjct: 276 QIDMEMSYIDQEDIMEMNEKLLRTIWKEIKGIDVG----------AIPRMTYQEAMDRY- 324

Query: 179 NIDLGTTLDNPDQPDRH 195
            ID   T    +  D  
Sbjct: 325 GIDKPDTRFGVEIKDLK 341



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 55/172 (31%), Gaps = 7/172 (4%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D    + +        L       G  +   D     F  ++   +          +   
Sbjct: 430 DCALVVADDYDTACAALSTLRLHLGRELNLIDNSKYKFLWVVDFPLLEYSPDEKRWVARH 489

Query: 241 YP--APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +P  +P+   A     +        L      +CN   E+     + +R E +    + +
Sbjct: 490 HPFTSPKDEFAQDLVNNNEAAYGKMLAKAYDLVCNGY-EMGGGSIRIYRNEIQQAMFRLL 548

Query: 299 Y---NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                ET      FL  L    P   GIA G DRLVML+   + I EVI  P
Sbjct: 549 GMSEEETQHKFGFFLEALKYGTPPHGGIAWGMDRLVMLLCETDAIREVIAFP 600


>gi|311069240|ref|YP_003974163.1| aspartyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869757|gb|ADP33232.1| aspartyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 592

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 76/223 (34%), Gaps = 18/223 (8%)

Query: 11  NRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFS 63
            +  +   RRP     L  R+ +  ++R +  EN F++I++  L   SP     ++    
Sbjct: 128 LKHRYLDLRRPAMFNTLQMRHNVTKAVRHFLDENGFLDIETPILTKSSPEGARDYLVPSR 187

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                   + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++  
Sbjct: 188 VHEGEFYALPQ------SPQLFKQLLMVSGVDRYYQIARCFRDEDLRADRQPEFTQIDIE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  S E++M    +++            S                  +   R+A +   
Sbjct: 242 MSFMSQEEIMALAEDMMAKVMRETKGVEVSLPLPRMTYEDAMNLYGSDKPDTRFAMLLTD 301

Query: 184 TTLDNPDQPDRHLLYLQA-----QQAGIRVAHDDTWSDIFSRI 221
            +    D   +      A     +   ++ A  D        +
Sbjct: 302 VSDIVKDTEFKVFSSAVANGGVVKAINVKGAAADYSRKDIDAL 344



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 11/173 (6%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCTIL 238
           D    L   DQ +     L A +  +          +F+ +      +  +         
Sbjct: 390 DGDLLLFGADQFEVVAQSLGALRLKLGKERGLIDESLFNFLWVIDWPLLEHDAEEGRFYA 449

Query: 239 DRYPAPESALANIYPAD----PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             +P       ++   D        + ++L     EL      + +   Q   F+     
Sbjct: 450 AHHPFTMPVREDLDLVDTAPENMKAQAYDLVLNGYELGGGSIRIFEKEIQEKMFKLLGFT 509

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           K+    E +      +       P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 510 KE----EAHEQFGYLMEAFEFGAPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 558


>gi|116750786|ref|YP_847473.1| bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA
           amidotransferase subunit C [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699850|gb|ABK19038.1| aspartyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 705

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 59/188 (31%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L KR  I    R++     F+EI++  L   +P     ++            
Sbjct: 148 RRPSMQDHLAKRYRIIKRARDFLDTRGFLEIETPILTKSTPEGARDYLVPSRVHPKEFYA 207

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ F     +R+ +     QPEFT L+   +    E 
Sbjct: 208 LPQ------SPQLFKQLLMMAGFERYFQVVRCFRDEDLRPNRQPEFTQLDMEASFIDEEF 261

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++    EV                     +   EA   Y +    T  D    
Sbjct: 262 IFELTEELVARMFEVGG----------IELPRPFPRMPYGEAMETYGSDRPDTRFDLKFI 311

Query: 192 PDRHLLYL 199
               +   
Sbjct: 312 EATDIFEN 319



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 9/96 (9%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-T 314
            ++ ++L     EL      +     Q   F      +    +E    D+   F+  L  
Sbjct: 486 RSRAYDLVVNGEELGGGSMRINKKDIQLRIF------RALGLSEQEIEDKFGFFVRALDY 539

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             P   GIA+G DR+V ++    +I EV   P ++S
Sbjct: 540 GAPPHGGIALGLDRVVSMILRTPSIREVTAFPKNRS 575


>gi|157371021|ref|YP_001479010.1| aspartyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166979993|sp|A8GFJ2|SYD_SERP5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157322785|gb|ABV41882.1| aspartyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 593

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMADRLKTRAKITSFVRRFMDSHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    + R                      +   +T  EA  RY   D     +  + 
Sbjct: 244 VREVMEKLARELWLDV----------KNVDLGDFPIMTFEEAMRRY-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDAKGRV 318



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +   D+W+ ++        E    G+         P   S               ++
Sbjct: 416 DLELTKLDSWAPLWVVDFPMFEEDGEGGLAAMHHPFTAPRDMSPEELAGTPTNAIANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           +     E+      +     Q+  F      E ++++K            L  L    P 
Sbjct: 476 MVINGYEVGGGSVRIHRSEMQQTVFSILGINEHEQREKFG--------FLLDALKYGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRLVML+TG +NI +VI  P
Sbjct: 528 HAGLAFGLDRLVMLLTGTDNIRDVIAFP 555


>gi|320354862|ref|YP_004196201.1| aspartyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320123364|gb|ADW18910.1| aspartyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 594

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 52/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    L+E  E              P            
Sbjct: 413 ELRLELARRLGLIQGDSFNFLWVTDFPLLEYDEEQKRYTAVHHPFTAPNEAQLELLETDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
               ++ ++L     E+      +  P+ Q+  F+    E      E        L  L 
Sbjct: 473 GAVKSRAYDLVLNGNEIGGGSIRIHSPLMQKKVFKALGIE----TEEAQEKFGFLLRALE 528

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DRL+ML+TG+ +I +VI  P
Sbjct: 529 LGAPPHGGIAFGVDRLMMLLTGSTSIRDVIAFP 561



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 70/183 (38%), Gaps = 21/183 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR      L+ R+    ++R Y  +NQF+EI++  L   +P     ++           
Sbjct: 139 LRRPEIAKNLILRHQALQTVRTYLNDNQFLEIETPMLTRSTPEGARDYLVPSRVHAGKFF 198

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E
Sbjct: 199 ALPQ------SPQLFKQILMVAGMDRYYQIVKCFRDEDLRADRQPEFTQIDMELSFITEE 252

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++     +I+   +            + +       +T  EA  R+   D   T    +
Sbjct: 253 EIITIVEGMIKALFKEI---------RDLDLQPPFNRMTYDEAMRRF-GTDRPDTRFGLE 302

Query: 191 QPD 193
             D
Sbjct: 303 LVD 305


>gi|291527507|emb|CBK93093.1| aspartyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 598

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 70/190 (36%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +   +R++     F+EI++  L + +P     ++            
Sbjct: 141 RRPDIQRNLMLRSNVLRVMRDFMANEGFLEIETPILCKSTPEGARDYLVPSRIHHGHFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+A+G ++ F  A  +R+ +     QPEFT  +   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMASGYDRYFQIARCFRDEDLRADRQPEFTQADMELSFVDIDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +++   +           +N +     + +   EA  R+   D   T    + 
Sbjct: 255 VIEVNERLLKHLFKEV---------INVDVEIPFKRMPWQEAMDRF-GSDKPDTRFGMEL 304

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 305 CDVSEVVKDC 314



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 47/148 (31%), Gaps = 5/148 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G+   +   +  +    L+E  +              P  E              K +
Sbjct: 423 ELGLIDENKYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGAVRAKAY 482

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     EL      +     Q   FE     K++     +      L      +P  +G
Sbjct: 483 DIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKER----AHEQFGFLLDAFSYGVPPHAG 538

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +A G DR+ M +   +NI EVI  P  +
Sbjct: 539 LAFGVDRICMHMLHTDNIKEVIAFPKVK 566


>gi|126697217|ref|YP_001092103.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166225373|sp|A3PFH7|SYD_PROM0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126544260|gb|ABO18502.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 598

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 67/192 (34%), Gaps = 26/192 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L  R+ I    RE+     F E+++  L   +P      R 
Sbjct: 125 ELRLKYRYLDLRRGKLLENLKTRHKIIKVAREFLDNFGFTEVETPLLTKSTPEG---ARD 181

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     + +   +   L  SP+   + L+  G +K +  A  +R+ +     QPEFT L+
Sbjct: 182 FLVPARLSN--GEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQPEFTQLD 239

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  S E+++    ++I+   +            N    +    ++  EA   Y   D
Sbjct: 240 IEMSFISEEEIISFNESLIKKIWKEVL---------NIKFNNAFPRMSWQEAMDNY-GTD 289

Query: 182 LGTTLDNPDQPD 193
              T       D
Sbjct: 290 RPDTRYQMLLKD 301



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 49/154 (31%), Gaps = 14/154 (9%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN---IYPADP 256
            A+   +       +  +    + E+ E              P    +  +       + 
Sbjct: 420 IAKDLNLIDKSKWNFLWVTDFPMFERNEEENRYEALHHPFCSPKNIKSKDSENLKKEIES 479

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL 313
                ++L    +EL      + +   QR   +        +      IDE F   +  L
Sbjct: 480 STANAYDLVLNGLELGGGSLRIHEANLQREVLKM-------VGLTDKEIDEKFGFLIEAL 532

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA G DR+ ML+ G ++I E I  P
Sbjct: 533 EMGAPPHGGIAFGLDRITMLIIGTDSIRETIAFP 566


>gi|307104224|gb|EFN52479.1| hypothetical protein CHLNCDRAFT_138835 [Chlorella variabilis]
          Length = 624

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 78/272 (28%), Gaps = 31/272 (11%)

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           +P          G   +      +R      +  PE              +     +  +
Sbjct: 218 APCLHMP---PGGHFGLKDQETRYRQRYLDLIVNPEVQ---------DIFRTRSRIIGGV 265

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           R   +      F  + ++     E    T  E +  YA  D    +   ++    L+   
Sbjct: 266 RRFLDERGFLEFRNEGIDLTHNPEF---TTCEFYQAYA--DYNDLIAMTEELISGLVLAI 320

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
                I+   D           I+   P   I+ C  L         +      D     
Sbjct: 321 KGTYKIQYHPDGPEGKAID---IDFTPPFRRISMCAGL----EEALDVKLPADMDSEEA- 372

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
           R  L     +    C           +       K +  ++   +DE+F   L   +P +
Sbjct: 373 RLVLVELCKKHGVECSPPHTTARLLDKL-----AKAQGDDQAMFVDENFCTALEYGLPPT 427

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            G  +G DR  M++T  NNI EV+  P  + +
Sbjct: 428 GGWGLGIDRFTMMLTDKNNIKEVLLFPAMKPD 459



 Score = 62.7 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 61/190 (32%), Gaps = 23/190 (12%)

Query: 47  MSLQYSPGNETHIRAFSTELIIQ------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF 100
             L   PG    ++   T    +      +   + ++   S      +++      +   
Sbjct: 219 PCLHMPPGGHFGLKDQETRYRQRYLDLIVNPEVQDIFRTRS------RIIGGVRRFLDER 272

Query: 101 AHA-WRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV-- 157
               +RN      H PEFT  E+Y+A+  Y  L+     +I               +   
Sbjct: 273 GFLEFRNEGIDLTHNPEFTTCEFYQAYADYNDLIAMTEELISGLVLAIKGTYKIQYHPDG 332

Query: 158 ------NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
                 + +       I++        ++ L   +D+ +   R +L    ++ G+  +  
Sbjct: 333 PEGKAIDIDFTPPFRRISMCAGLEEALDVKLPADMDSEEA--RLVLVELCKKHGVECSPP 390

Query: 212 DTWSDIFSRI 221
            T + +  ++
Sbjct: 391 HTTARLLDKL 400



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 13/57 (22%)

Query: 1   MHQIPSQPWWNRD--FHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEI 44
           +H  P   +  +D    YR+R                R+ I   +R +  E  F+E 
Sbjct: 221 LHMPPGGHFGLKDQETRYRQRYLDLIVNPEVQDIFRTRSRIIGGVRRFLDERGFLEF 277


>gi|300361854|ref|ZP_07058031.1| aspartate--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354473|gb|EFJ70344.1| aspartate--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 617

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 74/226 (32%), Gaps = 15/226 (6%)

Query: 18  RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L K    R+ I  +  EYF E+ FI+I++  L + SP     ++            
Sbjct: 136 RRPTLQKAIMLRSKILKATHEYFDEHGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    +Q
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMETSFTDEKQ 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY       +    D 
Sbjct: 250 VQDYTEGLLKKIMKDVMGIDLKTPIKRITWNEAMNKYGSDKPDTRYEMFIHDLSPIFKDS 309

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
             +      A    ++       +    +   +KIE          
Sbjct: 310 DFKVFSGAIADGGYVKGIAVKNGAK---QYSRKKIEEKQDYIKRYH 352



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ GI   +   +  +    L E  E              P  E         
Sbjct: 410 HLRREFAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+     KK+ Y E +      L  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAY-EQFGY---LLDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V   P
Sbjct: 526 MGFPPHAGLAIGLDRFAMMLAQKDNIRDVTAFP 558


>gi|167626917|ref|YP_001677417.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189082099|sp|B0TW08|SYD_FRAP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167596918|gb|ABZ86916.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 589

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 131 RRPEMQNKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 187 --KFYALPQSPQLFKQLLMVSGFDRYYQVVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +      F          +  + +T AEA  +Y +      +     
Sbjct: 245 IMSTMEKMIAGLFDATIGVKFD---------TPFQVMTYAEAMDKYGSDKPDLRIPLEFV 295

Query: 192 PDRHLLYLQAQQ 203
             +  +  +  +
Sbjct: 296 NIKEDMKNEEFK 307



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 5/140 (3%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
             W+ ++        + +  +         P  ++        +   ++ +++     E+
Sbjct: 425 KDWAPLWVVDFPMFEKDDNRLYAVHHPFTAPKVDTVEELTKDPENLLSRAYDMVINGYEV 484

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLV 330
                 +     Q   F            E        L  L    P   GIA G DRL+
Sbjct: 485 GGGSIRIHRQDMQAKVF----NLLGISDEEAREKFGFMLDALSYGTPIHGGIAFGVDRLI 540

Query: 331 MLVTGANNINEVIWTPFSQS 350
           ML+T   NI +VI  P +Q+
Sbjct: 541 MLLTNTTNIRDVIAFPKTQT 560


>gi|241667494|ref|ZP_04755072.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876040|ref|ZP_05248750.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842061|gb|EET20475.1| aspartyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 589

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 131 RRPEMQNKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 187 --KFYALPQSPQLFKQLLMVSGFDRYYQVVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +      F          +  + +T AEA  +Y +      +     
Sbjct: 245 IMSTMEKMIAGLFDATIGVKFD---------TPFQVMTYAEAMDKYGSDKPDLRIPLEFV 295

Query: 192 PDRHLLYLQAQQ 203
             +  +  +  +
Sbjct: 296 NIKEDMKNEEFK 307



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 5/140 (3%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
             W+ ++        + +  +         P  E+        +   ++ +++     E+
Sbjct: 425 KDWAPLWVVDFPMFEKDDNRLYAVHHPFTAPKVETVEELTKDPENLLSRAYDMVINGYEV 484

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLV 330
                 +     Q   F            E        L  L    P   GIA G DRL+
Sbjct: 485 GGGSIRIHRQDMQAKVF----NLLGISDEEAREKFGFMLDALSYGTPIHGGIAFGVDRLI 540

Query: 331 MLVTGANNINEVIWTPFSQS 350
           ML+T   NI +VI  P +Q+
Sbjct: 541 MLLTNTTNIRDVIAFPKTQT 560


>gi|167772469|ref|ZP_02444522.1| hypothetical protein ANACOL_03847 [Anaerotruncus colihominis DSM
           17241]
 gi|167665572|gb|EDS09702.1| hypothetical protein ANACOL_03847 [Anaerotruncus colihominis DSM
           17241]
          Length = 592

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  LL R+ I  +  +Y+ EN FIEI++ +L   +P     ++            
Sbjct: 138 RRSEMQHALLMRHKIVKAAHDYYDENGFIEIETPALIKSTPEGARDYLVPSRVHPGAFYA 197

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    + 
Sbjct: 198 LPQ------SPQQYKQMLMLSGFDRYMQIARCFRDEDLRADRQPEFTQIDLEMSFVDEDD 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M      ++                     +    +   EA  R+ +            
Sbjct: 252 VMTVNEGFMKRVFHEVLGVEIE---------TPFLRMPYDEAMRRFGSDKPDVRFGMELT 302

Query: 192 PDRHLLYLQAQQ 203
               LL   A +
Sbjct: 303 DLSDLLSDCAFK 314



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 41/132 (31%), Gaps = 9/132 (6%)

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E             +PA E              + +++     E+      +  P  Q
Sbjct: 443 YSEEEDRYVAKHHPFTHPAFEDIDRVESDPGVCRARAYDMVLNGCEVGGGSIRINTPELQ 502

Query: 285 RHRFEKEMQEKKKIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
              F      +   +   E        +       P   G+A G DRLVML+   ++I +
Sbjct: 503 ERMF------RALGFSTEEARARFGYLIDAFKFGAPPHGGMAYGLDRLVMLMLEKDSIRD 556

Query: 342 VIWTPFSQSNQE 353
           VI  P  Q+  E
Sbjct: 557 VIAFPKVQNASE 568


>gi|311110842|ref|ZP_07712239.1| aspartate--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|311065996|gb|EFQ46336.1| aspartate--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 614

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 74/226 (32%), Gaps = 15/226 (6%)

Query: 18  RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L K    R+ I  +  EYF EN FI+I++  L + SP     ++            
Sbjct: 133 RRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    +Q
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMETSFTDEKQ 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY       +    D 
Sbjct: 247 VQDYTEGLLKKIMKDVMGIDLKTPIKRITWDEAMNKYGSDKPDTRYEMFIHDLSPIFKDS 306

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
             +      A    ++       +    +   +KIE          
Sbjct: 307 DFKVFSGAIADGGYVKGIAVKNGAK---QYSRKKIEEKQDYIKRYH 349



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ GI   +   +  +    L E  E              P  E         
Sbjct: 407 HLRREFAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+     KK+ Y E +      L  L 
Sbjct: 467 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAY-EQFGY---LLDALD 522

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V   P
Sbjct: 523 MGFPPHAGLAIGLDRFAMMLAQKDNIRDVTAFP 555


>gi|291550619|emb|CBL26881.1| aspartyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 600

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 67/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L  ++ + +  R++F +  F+E+++  L + +P     ++            
Sbjct: 141 RRPDLQRNLRMKSQVMTLTRQFFSDEGFLEVETPMLGKTTPEGARDYLVPSRIHPGSFYG 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLYKQLLMCSGVDRYIQIARCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++     ++   +            + +     + +T  EA  RY   D        + 
Sbjct: 255 VIEVNEKYLKKLFKEVL---------DVDVQLPIQRMTWQEAMNRY-GSDKPDLRFGMEL 304

Query: 192 PD 193
            D
Sbjct: 305 KD 306



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 52/156 (33%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q  +   ++  +  I    L+E  E              P  E         
Sbjct: 415 ALRVELAKQLELLDKNEYRFVWITEFPLLEWSEEQNRFVAMHHPFTMPMEEDIQYIESDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   F+     K++     Y      L    
Sbjct: 475 GRVRAKAYDIVLNGNEIGGGSVRIFQDDIQEMMFKALGFTKEQ----AYSQFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLVMLMAKQDSIRDVIAFPKIK 566


>gi|238925266|ref|YP_002938783.1| aspartyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|259511859|sp|C4ZI12|SYD_EUBR3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238876942|gb|ACR76649.1| aspartyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 598

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 70/190 (36%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +   +R++     F+EI++  L + +P     ++            
Sbjct: 141 RRPDIQRNLMLRSNVLRVMRDFMANEGFLEIETPILCKSTPEGARDYLVPSRIHHGHFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+A+G ++ F  A  +R+ +     QPEFT  +   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMASGYDRYFQIARCFRDEDLRADRQPEFTQADMELSFVDIDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +++   +           +N +     + +   EA  R+   D   T    + 
Sbjct: 255 VIEVNERLLKHLFKEV---------INVDVEIPFKRMPWQEAMDRF-GSDKPDTRFGMEL 304

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 305 CDVSEVVKDC 314



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 47/148 (31%), Gaps = 5/148 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G+   +   +  +    L+E  +              P  E              K +
Sbjct: 423 ELGLIDENKYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGAVRAKAY 482

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     EL      +     Q   FE     K++     +      L      +P  +G
Sbjct: 483 DIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKER----AHEQFGFLLDAFSYGVPPHAG 538

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +A G DR+ M +   +NI EVI  P  +
Sbjct: 539 LAFGVDRICMHMLHTDNIKEVIAFPKVK 566


>gi|260912897|ref|ZP_05919382.1| aspartate-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260632887|gb|EEX51053.1| aspartate-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 598

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 139 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 198

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 199 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTASE 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R                      +   +T A+A  R+   D     +  + 
Sbjct: 253 VREIMEKMVRGLWLDIAGVDLG----------KFPVMTFADAMRRF-GSDKPDLRNPLEM 301

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  + +        +D    I
Sbjct: 302 VDVADLLKEVEFKVFNGPANDPNGRI 327



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    +  + +   G+         P   S        
Sbjct: 417 ALRLKLGRDLGLTKLDEWQPLWVIDFPM-FERDDEAGLAAMHHPFTSPRDFSPEQLEADP 475

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + +P  Q+  F      E+E +EK             
Sbjct: 476 TSAVANAYDMVINGYEVGGGSVRIFEPKMQQAVFSILGINEEEQREKFG----------F 525

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 526 LLDALKFGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 564


>gi|117618858|ref|YP_856059.1| aspartyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117560265|gb|ABK37213.1| aspartyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 668

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 74/208 (35%), Gaps = 20/208 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                  +L  R    + +R +  E+ F++I++  L   +P     ++            
Sbjct: 210 RRPEMAKYLKTRAKASAFVRRFMDEHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 269

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 270 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 323

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +    +IR            + ++      +   +T  EA  RY +   DL   ++  
Sbjct: 324 VREIMEEMIR----------KLWLHILNVDLGDFPIMTFDEAMRRYGSDKPDLRLPMELV 373

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D  D       A  AG         + +
Sbjct: 374 DVADLLTAVEFAVFAGPANDPKGRVAAL 401



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 15/151 (9%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEP--NLGINCCTILDRYPAPESALANIYPADPRFTK 260
           + G  +   +        I     E     G+         P+  S           +  
Sbjct: 492 KVGRDLGLLENSWKPLWVIDFPMFEEDGEGGLAAMHHPFTAPSGLSPEQLKANPVGAYAN 551

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q   F+       +++ K            L  L   
Sbjct: 552 AYDMVINGYEVGGGSVRIHNSEMQATVFDILGITPAEQRLKFG--------FLLDALKYG 603

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 604 TPPHAGLAFGLDRLSMLLTGTENIRDVIAFP 634


>gi|226954441|ref|ZP_03824905.1| aspartyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226834790|gb|EEH67173.1| aspartyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 592

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 20/202 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R YF ++ F+++++  L   +P     ++            
Sbjct: 134 RRPEMLERLRFRSKVTNLIRNYFEDHGFLDVETPILTRATPEGARDYLVPSRVSNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +  S + 
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDVETSFMSDDD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M                 +  F  +    F + E +T A+A   YA+   D+   L   
Sbjct: 248 IMDLME----------GLTVKMFDELLNVKFDKFERMTYADAMRDYASDKPDMRIPLKLV 297

Query: 190 DQPDRHLLYLQAQQAGIRVAHD 211
           D  D          AG      
Sbjct: 298 DVADLMQDVEFKVFAGPAKDPK 319



 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 50/154 (32%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KIGHDLNLATKEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEEVKNNPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE          +E        L  L    P 
Sbjct: 473 VAYDMVLNGTEIGGGSLRIYTLEMQKAIFEALGI----GEDEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRL+ML+TGA++I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLIMLMTGASSIRDVIAFPKTKTAE 562


>gi|225848649|ref|YP_002728812.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644107|gb|ACN99157.1| aspartyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 602

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 9/209 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  ++ R+ +  ++RE+ V N FIE+++  L   +P      R F     ++   
Sbjct: 142 RRPSMQRNIILRHEVYQAVREFLVGNGFIEVETPMLTKSTPEG---ARDFLVPSRLE--- 195

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ AG E+ F     +R+ +     QPEFT ++   +  S E 
Sbjct: 196 KGKFYALPQSPQLFKQILMVAGLERYFQIVKCFRDEDLRADRQPEFTQIDLEMSFVSEED 255

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I+   +              +           +   RY  ++L    D   +
Sbjct: 256 VMSLSEALIQHVYKKVLGIDIKIPFKRMSYEEAINKYGTDKPDLRY-GLELIDITDLALE 314

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
            +  +    A+  G+    +      FSR
Sbjct: 315 VEFKVFNDVAKSGGLVKGINVKGGAKFSR 343



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 19/158 (12%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP-ADPRF 258
            A++  +   +   +  +    L E  E    +         P  E          +P  
Sbjct: 420 LAEKLNLIDKNKLEFLWVVDFPLFEWDEEENRLVAIHHPFTSPKDEDIEKLDQALENPEI 479

Query: 259 TKRF-----ELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDF 309
              F     ++     E+      +  P  Q+  F+     E + K+K            
Sbjct: 480 ALSFKSKAYDMVLNGEEIGGGSIRIHTPYLQQKIFKLLNISEEEAKEKFG--------FL 531

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +  L    P   G+A G DR++ L+TG+ +I +VI  P
Sbjct: 532 IEALSYGAPPHGGLAFGLDRILALMTGSESIRDVIAFP 569


>gi|312879712|ref|ZP_07739512.1| aspartyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783003|gb|EFQ23401.1| aspartyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 600

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 15/171 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R +  L  R+ + +  R Y  E  F+E+++  L   +P      R F     +    
Sbjct: 143 RRERMQQNLRVRHAVGAYTRNYLGERGFMEVETPMLTKSTPEG---ARDFLVPSRVN--P 197

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F     +R+ +     QPEF+ ++   +  + E L
Sbjct: 198 GRFFALPQSPQIFKQILMVSGCDRYFQIVKCFRDEDLRADRQPEFSQVDLEMSFVTEEDL 257

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +     +                      +    +T  EA  RY +    
Sbjct: 258 YELLEGYMAGLFREVLDLEIP---------TPFPRMTWKEAMDRYGSDKPD 299



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 48/144 (33%), Gaps = 13/144 (9%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           V     +  +    L+E  E              P  E             ++ ++L   
Sbjct: 428 VEEGWRFLWVVDFPLLEWDEEQGRYTAVHHPFTAPKDEDLPLLDTDPGAVRSRAYDLVLN 487

Query: 268 NIELCNACDELLDPIEQRHRFEKEM----QEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
             E+      + +P  Q   F+         +++            L  L    P   G+
Sbjct: 488 GNEVGGGSIRIHNPQMQERVFQALAFTPEAARERFG--------FLLEALSYGTPPHGGL 539

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A+GFDRL ML+ GA +I EV+  P
Sbjct: 540 ALGFDRLAMLLCGAKSIREVMAFP 563


>gi|226227121|ref|YP_002761227.1| aspartyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090312|dbj|BAH38757.1| aspartyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 593

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 67/182 (36%), Gaps = 23/182 (12%)

Query: 4   IPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET 57
           +P++    R  +   R       L+ R+ +    R +  +  ++E+++  L   +P    
Sbjct: 127 MPAEELRLRHRYLDLRRPELQDNLVLRHRLMQVTRRFLSDRGYLELETPILTKPTPEGAR 186

Query: 58  -HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            ++            + +      SP+   +  +  G ++ F  A  +R+ +     QPE
Sbjct: 187 DYLVPSRVHPGEFYALPQ------SPQIYKQLFMCCGYDRYFQIARCFRDEDLRADRQPE 240

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT ++   +    E ++     +I    + A   I +            E ++ A+A  +
Sbjct: 241 FTQIDIEASFIEREDILTMAQGLIGALWKEAGHDIPAQ----------FERMSYADAMEQ 290

Query: 177 YA 178
           Y 
Sbjct: 291 YG 292



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 18/113 (15%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF-------EKEMQ 293
           +P      A            +++     EL        DP  Q   F        +E +
Sbjct: 458 HPEDM--QAYPDEPARWRALAYDVVLNGTELGGGSIRTSDPAVQSRMFSLLGIGSTEEQE 515

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +     E        L      P   GIA GFDR+ ML++GA ++ +VI  P
Sbjct: 516 RRFGFLLEG-------LRA--GAPPHGGIAFGFDRIAMLLSGATSLRDVIAFP 559


>gi|294651458|ref|ZP_06728771.1| aspartate--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292822608|gb|EFF81498.1| aspartate--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 592

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 20/202 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R YF ++ F+++++  L   +P     ++            
Sbjct: 134 RRPEMLERLRFRSKVTNLIRNYFEDHGFLDVETPILTRATPEGARDYLVPSRVSNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +  S + 
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDVETSFMSDDD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M                 +  F  +    F + E +T A+A   YA+   D+   L   
Sbjct: 248 IMDLME----------GLTVKMFDELLNVKFDKFERMTYADAMRDYASDKPDMRIPLKLV 297

Query: 190 DQPDRHLLYLQAQQAGIRVAHD 211
           D  D          AG      
Sbjct: 298 DVADLMQDVEFKVFAGPAKDPK 319



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 49/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KIGHDLNLATKEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEEVKNNPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEIGGGSLRIYTLEMQKAIFEALGI----GEEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRL+ML+TGA++I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLIMLMTGASSIRDVIAFPKTKTAE 562


>gi|254482561|ref|ZP_05095800.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214037252|gb|EEB77920.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 574

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 75/206 (36%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
             +  +  L+ R+ I S++R +     F++I++  L   +P     ++    T       
Sbjct: 110 RRHEMQERLITRSKITSAVRTFLDREGFLDIETPILTRATPEGARDYLVPSRTHP----- 164

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    E+
Sbjct: 165 -GQFFALPQSPQLFKQLLMVSGFDRYYQVAKCFRDEDLRADRQPEFTQIDIETSFLEEEE 223

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R   +                  E  ++  +EA  RY   D      + + 
Sbjct: 224 IMGITERMVRELFQSTLD----------VELPEFPHMPYSEAMERY-GSDKPDLRIDMEL 272

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
                L  Q      R   DD    +
Sbjct: 273 VSVDDLMQQVDFKVFRGPADDVAGRV 298



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 64/203 (31%), Gaps = 11/203 (5%)

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
           Q        +       E +  A+    +   D    ++      R  + + A Q  IR 
Sbjct: 345 QSPILKFMPDEVVMQMMERLDAADGDIIFFGADKTRVVNESLGALR--IKVAADQNMIRE 402

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
                W   F     +    N G+         P+  S    +       ++ +++    
Sbjct: 403 GWAPLWVVDFPMFEED---GNGGLTPLHHPFTAPSC-SVEELVDKPAEALSRAYDMVLNG 458

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFD 327
            EL      +     Q   F    +  +    E        L  L    P   G+A G D
Sbjct: 459 CELGGGSIRIHQRDMQEAVF----RILEISDEEADEKFGFLLQALQYGAPPHGGLAFGLD 514

Query: 328 RLVMLVTGANNINEVIWTPFSQS 350
           R+VML+T   +I +VI  P +Q+
Sbjct: 515 RIVMLMTDCASIRDVIAFPKTQT 537


>gi|262371676|ref|ZP_06064955.1| aspartyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262311701|gb|EEY92786.1| aspartyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 593

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 20/202 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R YF ++ F+++++  L   +P     ++            
Sbjct: 134 RRPEMLDRLRFRSKVTNLIRNYFEDHGFLDVETPILTRATPEGARDYLVPSRVSNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +  S + 
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDVETSFMSDDD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M                 +  F  +    F + E +T A+A   YA+   D+   L   
Sbjct: 248 IMDLME----------GLTVKMFNELLNVKFDKFERMTYADAMRDYASDKPDMRIPLKLV 297

Query: 190 DQPDRHLLYLQAQQAGIRVAHD 211
           D  D          AG      
Sbjct: 298 DVADLMQDVEFKVFAGPAKDPK 319



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 49/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KIGHDLNLATCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEEVKSNPGAALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEIGGGSLRIYTLEMQKAIFEALGI----GEEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRL+ML+TGA++I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLIMLMTGASSIRDVIAFPKTKTAE 562


>gi|58267156|ref|XP_570734.1| asparagine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57226968|gb|AAW43427.1| asparagine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 600

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/330 (15%), Positives = 100/330 (30%), Gaps = 35/330 (10%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
            +  R ++  + RE F + +  E+    + Q S    + +  F       D+     YL 
Sbjct: 296 VMRFRALLLRAFRESFNKRRITEVTPPCMVQTSVEGGSTLFEF-------DYYGSKAYLT 348

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S +   + +L +    ++C   ++R  +     H  E+T LE       ++ L+    +
Sbjct: 349 QSSQLYLETVLPS-LGDVYCIQESFRAEKSLTRRHLSEYTHLEAELVFIKFKDLLDHLED 407

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +I    +V      +           PE++     F R    D              + Y
Sbjct: 408 MICEVIDVLLADPVAS---EIIKTLNPEFVPPQRPFVRLDYRD-------------AITY 451

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD-PR 257
           L           D    D  +     K+     IN   +L  +P    +       D P 
Sbjct: 452 LNEHGIKREDGEDHVVGDDIAEAAERKMTDQ--INKPIMLIHFPKSLKSFYMKSLDDAPD 509

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
           FT+  ++    +         +         E+ M   K+      P             
Sbjct: 510 FTESVDVLVPGVGEVVGGSMRISD------LEELMAGYKREGIPADPYYWFTDQRKYGTT 563

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  G  +G +RL+  +     + E    P 
Sbjct: 564 EHGGYGLGVERLLAWILKRYTVRECSLYPR 593


>gi|238852665|ref|ZP_04643075.1| aspartate--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834811|gb|EEQ27038.1| aspartate--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 617

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 74/226 (32%), Gaps = 15/226 (6%)

Query: 18  RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L K    R+ I  +  EYF EN FI+I++  L + SP     ++            
Sbjct: 136 RRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    +Q
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMETSFTDEKQ 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY       +    D 
Sbjct: 250 VQDYTEGLLKKIMKDVMGIDLKTPIKRITWDEAMNKYGSDKPDTRYEMFIHDLSPIFKDS 309

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
             +      A    ++       +    +   +KIE          
Sbjct: 310 DFKVFSGAIADGGYVKGIAVKNGAK---QYSRKKIEEKQDYIKRYH 352



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ GI   +   +  +    L E  E              P  E         
Sbjct: 410 HLRREFAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+     KK+ Y E +      L  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAY-EQFGY---LLDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V   P
Sbjct: 526 MGFPPHAGLAIGLDRFAMMLAQKDNIRDVTAFP 558


>gi|283852906|ref|ZP_06370167.1| aspartyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571735|gb|EFC19734.1| aspartyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 467

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 64/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +     L R+    S+R Y     F+E+++  L   +P      R F     + +  
Sbjct: 12  RRPKLAANFLLRHKAVQSIRRYLDTLGFLEVETPVLTKSTPEG---ARDFLVPSRMTNGA 68

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    EQ
Sbjct: 69  ---FYALPQSPQLFKQLLMMSGFDRYYQVVKCFRDEDLRADRQPEFTQVDIEMSFVDEEQ 125

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R   + A                    +T AEA   Y  +D          
Sbjct: 126 VMNMAETMVRTMFKEAADIALPDV---------FPRMTFAEAIRDY-GLDKPDIRFGLKL 175

Query: 192 PD 193
            D
Sbjct: 176 VD 177



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 66/208 (31%), Gaps = 33/208 (15%)

Query: 165 PEYITVAEAFARYA-NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
              I   E  + +A  +         +  D  +  +   QAG     +     +  ++  
Sbjct: 229 WIKIKEDEWQSPFAKFLSDAERQGLIEALDIEVGDIVFFQAGAPDMVNTALGYLRIQLGE 288

Query: 224 EKIEPNLGINCCTILDRYP------APESALANIYP---ADPRFTKR------------F 262
                  G      +  +P        +   A  +P     P   +R            +
Sbjct: 289 RFGLIPEGTFAPVWVTDFPLLEYDPEAKRYAARHHPFTAPQPGNLERLADAPAEALSRAY 348

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQ 318
           +L     E+      + D   Q+  F         +  E    ++ F   L  L    P 
Sbjct: 349 DLVLNGSEIGGGSIRIHDRETQKAMF-------AVLGIEAGEAEDKFGFLLRALEYGAPP 401

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             GIA G DRL+M+++GA +I +VI  P
Sbjct: 402 HGGIAFGLDRLIMILSGAKSIRDVIAFP 429


>gi|157693160|ref|YP_001487622.1| aspartyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157681918|gb|ABV63062.1| aspartate--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 594

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 27/188 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R            +  R+ +  + R +  +N F++I++  L   +P     ++ 
Sbjct: 127 DVRLKYRYLDLRRPAMFETMKMRHEVTRAFRHFLDDNGFLDIETPILTKSTPEGARDYLV 186

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT +
Sbjct: 187 PSRVHEGEFYALPQ------SPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQPEFTQV 240

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S E +M     ++    +       +              +T  EA   Y + 
Sbjct: 241 DIEMSFMSQEDIMTLAEEMMAKVMKDVKGVDLT---------LPLPRMTYDEAMNSYGSD 291

Query: 181 DLGTTLDN 188
              T  + 
Sbjct: 292 KPDTRFEM 299



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +       +  +    L+EK E              P  +         
Sbjct: 412 ALRLKLGKELELIDESRFNFLWVVDWPLLEKDEEEGRFYAAHHPFTMPVRDDLELIETSP 471

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           +    + ++L     EL      + +   Q   F      K+    E Y      L    
Sbjct: 472 EDMKAQAYDLVLNGYELGGGSIRIFEKDIQEKMFSLLGFSKE----EAYEQFGFLLDAFE 527

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +P   GIA+G DRLVML+ G +N+ + I  P
Sbjct: 528 HGVPPHGGIALGLDRLVMLLAGRSNLRDTIAFP 560


>gi|238919498|ref|YP_002933013.1| aspartyl-tRNA synthetase, [Edwardsiella ictaluri 93-146]
 gi|259511858|sp|C5B9S7|SYD_EDWI9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238869067|gb|ACR68778.1| aspartyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 591

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 66/207 (31%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I + +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMAARLKTRAKITAFVRRFMDNHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMSAGQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    + R                      +   +T AEA  R+   D     +  + 
Sbjct: 244 VREIMEALARALWMEIKGVDLG----------DFPVMTFAEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   L             +D    + 
Sbjct: 293 VDVADLVKSVDFKVFSGPANDARGRVI 319



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            +++  +  W+ ++        E    G+         P   S  A            ++
Sbjct: 416 DLQLTDESRWAPLWVVDFPMFEEDGEGGLAAMHHPFTSPRDISPEALKANPVGAIANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           +     E+      +     Q   F+     E ++++K            L  L    P 
Sbjct: 476 MVMNGYEVGGGSVRIHSGAMQSAVFDILGINEQEQREKFG--------FLLDALKFGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRLVML+TG  NI +VI  P
Sbjct: 528 HAGLAFGLDRLVMLLTGTENIRDVIAFP 555


>gi|302391508|ref|YP_003827328.1| aspartyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203585|gb|ADL12263.1| aspartyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 596

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 69/188 (36%), Gaps = 19/188 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ ++ ++R Y  E  F+EI++  L   +P     ++            
Sbjct: 140 RRPNMQENIILRHQVKKAVRNYLDEEDFLEIETPMLTKSTPEGARDYLVPSRVHRGKFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ +     +R+ +     QPEFT ++   +    + 
Sbjct: 200 LPQ------SPQLFKQLLMVSGMERYYQITRCFRDEDLRADRQPEFTQIDMEMSFVDEDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I+     A  +  +          +  +++  EA  R+   D        + 
Sbjct: 254 VISLVEGMIQEIFATAGLEEPT----------DFAHMSYQEAMDRF-GTDRPDLRFGLEL 302

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 303 VDVSEIVE 310



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 50/157 (31%), Gaps = 5/157 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    AQ+  +    +  +  I    L+E+ E    +         P  E         
Sbjct: 412 HLRLKLAQRLDLIDQDEFNFVWITDFPLLERDEDEDRLVSLHHPFTAPQDEDIDLLDSKP 471

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K ++L     E+      + D   Q   FE           E        L    
Sbjct: 472 TEVKAKAYDLVLNGTEIGGGSIRIHDRDLQEKIFENLSLT----DEEIDNKFGFLLEAFD 527

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              P   GIA G DRLVML+     I +VI  P +Q+
Sbjct: 528 YGTPPHGGIAFGLDRLVMLLGKLETIRDVIAFPKTQN 564


>gi|323702181|ref|ZP_08113848.1| aspartyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532868|gb|EGB22740.1| aspartyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 601

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+    S+R++   + F+EI++  L   +P     ++            
Sbjct: 141 RRPEMQQSLIMRHRAAKSVRDFLDNHGFLEIETPMLTKSTPEGARDYLVPSRVNPGKFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F     +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIFKQLLMLAGMEKYFQIVRCFRDEDLRADRQPEFTQIDLEMSFVDADD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                      ++  EA   Y   D   T  + + 
Sbjct: 255 VMSLMEQMIAKVCKDTIGLEIK---------VPFPRLSYQEAMDLY-GSDKPDTRFDMEL 304

Query: 192 PDRHLLYLQA 201
            D   +  + 
Sbjct: 305 KDITPIAAKC 314



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 15/153 (9%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            AQ+  +       +  +    L+E                 P  E              
Sbjct: 420 LAQRLNLIPEDRWNFLWVIDFPLLEYDAEEGRYFAMHHPFTSPVEEDIPLLQTDPGKVRA 479

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL 313
           + +++    +E+      +     Q   F+      +E +EK     E +          
Sbjct: 480 RAYDMVLNGVEVGGGSIRIHRRDVQELMFKALGLGPEEAKEKFGFMLEAFE--------- 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA GFDRLVML+TG ++I +VI  P
Sbjct: 531 YGAPPHGGIAFGFDRLVMLLTGKDSIRDVIAFP 563


>gi|157375167|ref|YP_001473767.1| aspartyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189082144|sp|A8FUW6|SYD_SHESH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157317541|gb|ABV36639.1| aspartyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 595

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 90/273 (32%), Gaps = 23/273 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R+ + S++R +  ++ F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMADRIVFRSKVTSAVRRFLDDSGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S  +
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSAE 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + R   +                  E   +T AEA  R+   D     +  + 
Sbjct: 246 VMAKTEEMTRGLFKDLL----------NVDLGEFPKMTFAEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSD--IFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
            D   +    +    +   +D      +       K+              Y A   A  
Sbjct: 295 IDVADILKDVEFKVFQEPANDPAGRVAVLCIPGGAKLSRKQLDEYAKYATIYGAKGLAWM 354

Query: 250 NIYPADPR--FTKRFELYACNIELCNACDELLD 280
            +   D      +   L   N ++ N   E  +
Sbjct: 355 KVNDLDKGLEGIQSPVLKFLNEDVVNGLLERTN 387



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 49/147 (33%), Gaps = 7/147 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT--K 260
           +AG      +        +     EP        +   + AP         ADP      
Sbjct: 414 KAGEDFDLLNGEWKPLWVVDFPMFEPTSDGGLHAMHHPFTAPMGITPEQLEADPTAAISD 473

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            +++     EL      + +   Q   F     E      E        L  L    P  
Sbjct: 474 AYDMVLNGCELGGGSVRIHNSEMQSAVFRILGIE----EEEANEKFGFLLEALRYGTPPH 529

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
           +G+A G DR+VML+TGA +I +V+  P
Sbjct: 530 AGLAFGLDRIVMLMTGATSIRDVMAFP 556


>gi|85014451|ref|XP_955721.1| asparagine--tRNA ligase [Encephalitozoon cuniculi GB-M1]
 gi|74621026|sp|Q8SQK8|SYNC_ENCCU RecName: Full=Probable asparaginyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|19171415|emb|CAD27140.1| ASPARAGINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 502

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 109/351 (31%), Gaps = 42/351 (11%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRA 61
           + +     R    +R+ FL  R  +   +R+++ E ++ E+   ++      G  T    
Sbjct: 180 LTNGHLGLRTK--KRQLFLKARGHLLKIIRDFYFEGEYTEVTPPTMVQTQVEGGST---- 233

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L   D+  +  YL  S +   + ++ A   + +C   ++R  +     H  E+T +
Sbjct: 234 ----LFKLDYYGEDAYLTQSSQLYLETVVPA-SHRAYCIMPSYRAEKSRTRRHLSEYTHV 288

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E   A    + L+     ++  +     +++ S                +   F  +   
Sbjct: 289 EAEMADIDLDGLISSIEALVSYSMRRFYEEMKS---------------DILSVFPEFEFH 333

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
            +  T     +    +  L+++        D    D         +   +G  C   L  
Sbjct: 334 KVPRTPFKRIKYSEAIELLKSKGYKKEDNTDFELGDDIPDAAERYLVEVVGDGCPVFLTH 393

Query: 241 YPA-PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           +    +         D   T+  +L    I          D  E            +   
Sbjct: 394 FLVGHKPFYMRKDENDKGLTESTDLLFPGIGEILGGSMRQDTYE---------DLIEGFR 444

Query: 300 NETYPID--EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            E   ID    +L        +  G  +GF+R +M +    +++E    P 
Sbjct: 445 RENINIDPYYWYLDMARFGPCKHGGYGLGFERFLMGLMRYESVDEATLYPR 495


>gi|194017133|ref|ZP_03055745.1| aspartyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194011001|gb|EDW20571.1| aspartyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 594

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 27/188 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R            +  R+ +  + R +  +N F++I++  L   +P     ++ 
Sbjct: 127 DVRLKYRYLDLRRPAMFETMKMRHEVTRAFRHFLDDNGFLDIETPILTKSTPEGARDYLV 186

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT +
Sbjct: 187 PSRVHEGEFYALPQ------SPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQPEFTQV 240

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S E +M     ++    +       +              +T  EA   Y + 
Sbjct: 241 DIEMSFMSQEDIMTLAEEMMAKVMKDVKGVELT---------LPLPRMTYDEAMNSYGSD 291

Query: 181 DLGTTLDN 188
              T  + 
Sbjct: 292 KPDTRFEM 299



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +       +  +    L+EK E              P  +         
Sbjct: 412 ALRLKLGKELELIDESVFNFLWVVDWPLLEKDEEEGRFYAAHHPFTMPVRDDLELIETSP 471

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           +    + ++L     EL      + +   Q   F      K+    E Y      L    
Sbjct: 472 EDMKAQAYDLVLNGYELGGGSIRIFEKDIQEKMFSLLGFSKE----EAYEQFGFLLDAFE 527

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +P   GIA+G DRLVML+ G +N+ + I  P
Sbjct: 528 HGVPPHGGIALGLDRLVMLLAGRSNLRDTIAFP 560


>gi|71278161|ref|YP_268840.1| aspartyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|97196634|sp|Q483C7|SYD_COLP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71143901|gb|AAZ24374.1| aspartyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 601

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 77/229 (33%), Gaps = 31/229 (13%)

Query: 3   QIP-------SQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P       S+    +  +   R       L  R  + S++R       F++I++  L 
Sbjct: 107 PLPLDSNQVNSEELRLKYRYLDLRRVEMTERLRFRAKVTSAVRSSLESQGFLDIETPILT 166

Query: 51  Y-SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P     ++    T         +   L  SP+   + L+ +G E+ +     +R+ +
Sbjct: 167 AATPEGARDYLVPSRTHK------GQFFALPQSPQLFKQLLMMSGMERYYQIVKCFRDED 220

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                QPEFT ++   +  S +Q+M+    +IR   +                  E   +
Sbjct: 221 LRADRQPEFTQIDIETSFMSSDQVMEVTEKMIRELFQELLDVDLG----------EFPRM 270

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +EA  R+   D     +  +  D   +    +        +D    +
Sbjct: 271 PYSEAMTRF-GSDKPDLRNPLELIDVDDILKDVEFKVFSGPANDENGRV 318



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 12/149 (8%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP--APESALANIYPADPRFT- 259
           + G  +            +     E    ++       +P  AP +  A    A+P    
Sbjct: 417 KLGEELDLLQGEWKPLWVVDFPMFEE---VDGHMHAIHHPFTAPTNLTAEQLEANPVGAL 473

Query: 260 -KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
              +++     EL      + +   Q   F    +       E        L  L    P
Sbjct: 474 SDAYDMVLNGCELGGGSVRIHNQDMQAAVF----RILGISDEEAEEKFGFLLEALQYGAP 529

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +G+A G DRLVML+TGA++I +V+  P
Sbjct: 530 PHAGLAFGLDRLVMLMTGASSIRDVMAFP 558


>gi|301155721|emb|CBW15189.1| aspartyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 588

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++             +QN+      +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGL----------WQNIIGVDLGKFPQMTWQEAMTRF-GSDKPDLRNPLEL 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 51/157 (32%), Gaps = 14/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  +++     E+      + DP  Q+  F      E ++++K            L
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQREKFG--------FLL 519

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 520 DALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|296123536|ref|YP_003631314.1| aspartyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296015876|gb|ADG69115.1| aspartyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 589

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 72/203 (35%), Gaps = 22/203 (10%)

Query: 4   IPSQPWWNRDFHYR-RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET 57
           +P++    +  +   RRP     ++ R+ +  + R+YF  + F+EI++  L   +P    
Sbjct: 119 LPNEELRMQYRYLDLRRPVVQQAIILRHKLAKATRDYFDRHNFLEIETPILGRSTPEGAR 178

Query: 58  -HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            ++            + +      SP+   + L+ AG ++ F  A  +R+ +     QPE
Sbjct: 179 DYLVPSRVHEGSFYALPQ------SPQLYKQILMVAGYDRYFQIARCFRDEDLRADRQPE 232

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT ++   A    + ++     ++    +    +                 +T  E   +
Sbjct: 233 FTQIDVEMAFVKQDDILSTIDGLMAHLLKELRGEELP---------LPLPRLTHREVMEK 283

Query: 177 YANIDLGTTLDNPDQPDRHLLYL 199
           Y +              + +   
Sbjct: 284 YGSDKPDLRFGMELICLKEIAEN 306



 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 49/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +    +   + +    + +  E              P  E         
Sbjct: 408 ALRNRLAKELALYDPKEMKIAWVVDFPMFQWDEDEQRWVAEHHPFCQPHEEDIDILETDP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                + ++L     E  +    + DP  Q+  F     +      E        L  L 
Sbjct: 468 GKVRAQSYDLVCNGYEAASGSVRIHDPAVQQRIFSMMGIQ----PEEAELRFGFLLEALR 523

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M+ +G +NI +VI  P
Sbjct: 524 YGAPPHAGVALGLDRWSMMFSGTDNIRDVIAFP 556


>gi|134111763|ref|XP_775417.1| hypothetical protein CNBE1330 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258076|gb|EAL20770.1| hypothetical protein CNBE1330 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 600

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/330 (15%), Positives = 100/330 (30%), Gaps = 35/330 (10%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
            +  R ++  + RE F + +  E+    + Q S    + +  F       D+     YL 
Sbjct: 296 VMRFRALLLRAFRESFNKRRITEVTPPCMVQTSVEGGSTLFEF-------DYYGSKAYLT 348

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S +   + +L +    ++C   ++R  +     H  E+T LE       ++ L+    +
Sbjct: 349 QSSQLYLETVLPS-LGDVYCIQESFRAEKSLTRRHLSEYTHLEAELVFIKFKDLLDHLED 407

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +I    +V      +           PE++     F R    D              + Y
Sbjct: 408 MICEVIDVLLADPVAS---EIIKTLNPEFVPPQRPFVRLDYRD-------------AITY 451

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD-PR 257
           L           D    D  +     K+     IN   +L  +P    +       D P 
Sbjct: 452 LNEHGIKREDGEDHVVGDDIAEAAERKMTDQ--INKPIMLIHFPKSLKSFYMKSLDDAPD 509

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
           FT+  ++    +         +         E+ M   K+      P             
Sbjct: 510 FTESVDVLVPGVGEVVGGSMRISD------LEELMAGYKREGIPADPYYWFTDQRKYGTT 563

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  G  +G +RL+  +     + E    P 
Sbjct: 564 EHGGYGLGVERLLAWILKRYTVRECSLYPR 593


>gi|317502044|ref|ZP_07960226.1| aspartate-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331090440|ref|ZP_08339321.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316896518|gb|EFV18607.1| aspartate-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401187|gb|EGG80780.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 597

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 65/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ ++ + +  R++F E  F+E+++  L + +P     ++            
Sbjct: 141 RRADLQRNLMMKSQVMTLTRQFFSEEGFLEVETPVLGKSTPEGARDYLVPSRVHPGSFYG 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    ++
Sbjct: 201 LPQ------SPQLYKQLLMCSGFDRYIQIARCFRDEDLRADRQPEFTQIDMELSFVDVDE 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      +    +                    + +T  EA  R+   D        + 
Sbjct: 255 VIDVNERYLARVFKEVLGVDVP---------LPIQRMTWQEAMDRF-GSDKPDLRFGMEL 304

Query: 192 PD 193
            D
Sbjct: 305 TD 306



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q  +   ++  +  I    L+E  E              P  E         
Sbjct: 415 ALRVELAKQLELLDKNEFRFVWITEFPLLEWSEEQNRYVAMHHPFTMPMEEDLPLIDSDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K++     Y      L    
Sbjct: 475 GKVRAKAYDIVLNGNEIGGGSVRIFQDDIQEKMFEVLGFTKEQ----AYSQFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLVMLMAKQDSIRDVIAFPKVK 566


>gi|56970503|gb|AAH88466.1| Nars2 protein [Rattus norvegicus]
          Length = 277

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 78/281 (27%), Gaps = 22/281 (7%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHES 128
           +    P +L  S +    ++++    ++F F   +R        H  EF M+E   +   
Sbjct: 9   NFFDVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEVSFVE 67

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             Q +   M  +  A               C+ F         E   +          +N
Sbjct: 68  SLQDLMQVMEGLFKATTEMVLSHCPEDVELCHQFIASGQKDRLEHMLK----------NN 117

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                        +QA         W         + +  + G      +  YP+     
Sbjct: 118 FLIISYAEAIEILKQASQNFTFTPKWGVDLQTEHEKYLVRHCGNIPV-FVINYPSELKPF 176

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEMQEKKKIYNETYPIDE 307
                 D          A    L     EL     +  R+   E +  +    + Y    
Sbjct: 177 YMRENED----DPQNTVAAVDLLVPGVGELFGGSLREERYHVLEQRLARSGLTKAYQ--- 229

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +L           G  MGF+R +  + G +NI +VI  P 
Sbjct: 230 WYLDLRKFGSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 270


>gi|330829085|ref|YP_004392037.1| aspartyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328804221|gb|AEB49420.1| Aspartyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 588

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 74/208 (35%), Gaps = 20/208 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                  +L  R    + +R +  E+ F++I++  L   +P     ++            
Sbjct: 130 RRPEMAKYLKTRAKASAFVRRFMDEHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +    +IR            + ++      +   +T  EA  RY +   DL   ++  
Sbjct: 244 VREVMEEMIR----------KLWLHILNVDLGDFPIMTFDEAMRRYGSDKPDLRLPMELV 293

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D  D       A  AG         + +
Sbjct: 294 DVADLLTAVEFAVFAGPANDPKGRVAAL 321



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 15/151 (9%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEP--NLGINCCTILDRYPAPESALANIYPADPRFTK 260
           + G  +   +        I     E     G+         P+  S           +  
Sbjct: 412 KVGRDLGLLENSWKPLWVIDFPMFEEDGEGGLAAMHHPFTAPSNMSPAELKANPVGAYAN 471

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q   F+       +++ K            L  L   
Sbjct: 472 AYDMVINGYEVGGGSVRIHNSEMQSTVFDILGITPAEQRLKFG--------FLLDALKYG 523

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 524 TPPHAGLAFGLDRLSMLLTGTENIRDVIAFP 554


>gi|326473036|gb|EGD97045.1| asparaginyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
 gi|326477878|gb|EGE01888.1| asparaginyl-tRNA synthetase Slm5 [Trichophyton equinum CBS 127.97]
          Length = 552

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 58/394 (14%), Positives = 112/394 (28%), Gaps = 57/394 (14%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS 52
           + Q+P         H R R          ++     + E F  +    F+++    +  S
Sbjct: 162 LRQLP---------HLRLRTPFNALLSRLKSEFIYQVTEEFRSHRHLNFVQVQPPLITSS 212

Query: 53  ---PGNETHI---RAFSTELI-IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                 E      R   TE     +  + P YL  S +   +   AA    ++  +  +R
Sbjct: 213 DCEGAGEVFSIKPRDVVTEEGKAIEFFKSPKYLTVSSQLHLEAY-AAELGNVWTLSPTFR 271

Query: 106 NGEQG-CLHQPEFTMLEWYRAHESY-EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
             +     H  EF MLE   ++    E L      ++R   +       + +  +     
Sbjct: 272 AEKSDTPRHLSEFYMLEVEMSYVDSLEPLTAFVETLLRNMTQRVYNSPVAQELFSLKAAD 331

Query: 164 EP-EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG-IRVAHDDTWSDIFSRI 221
           +  +  +  +   R+  +  G                +A   G +      +WS      
Sbjct: 332 DLTKDTSNVDLEKRWMTLMEGPRWPRITFAHAIKYLHEAVNTGRVTFDFSPSWSGGLQLE 391

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALAN-----IYPADPRFTKRFELYACNI-ELCNAC 275
             + +   +G      +  YP                 +      F+L    I E+    
Sbjct: 392 HEKFLVDTIGKGLPVFVTDYPKAVKPFYMLPSSGSSNENGETVACFDLLLPEICEVVGGS 451

Query: 276 DELL--DPIEQRHRFEKEMQEKKKIYNETYP--IDE-----DFLACLT------------ 314
                  P+ Q  R    ++ K           +D        LA               
Sbjct: 452 LREHRLSPLIQNMREHGLLKLKDSTPEPASASAVDAKAPYPHLLANEELGSIQWYADLRR 511

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +GFDR V  + G +N+ +++  P 
Sbjct: 512 WGTVPHGGFGLGFDRFVGYLAGVSNLRDLVPFPR 545


>gi|116629515|ref|YP_814687.1| aspartyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116095097|gb|ABJ60249.1| aspartyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 617

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 74/226 (32%), Gaps = 15/226 (6%)

Query: 18  RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L K    R+ I  +  EYF EN FI+I++  L + SP     ++            
Sbjct: 136 RRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    +Q
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMETSFTDEKQ 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY       +    D 
Sbjct: 250 VQDYTEGLLKKIMKDVMGIDLKTPIKRITWDEAMNKYGSDKPDTRYEMFIHDLSPIFKDS 309

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
             +      A    ++       +    +   +KIE          
Sbjct: 310 DFKVFSGAIADGGYVKGIAVKNGAK---QYSRKKIEEKQDYIKRYH 352



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ GI   +   +  +    L E  E              P  E         
Sbjct: 410 HLRREFAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+     KK+ Y E +      L  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAY-EQFGY---LLDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V   P
Sbjct: 526 MGFPPHAGLAIGLDRFAMMLAQKDNIRDVTAFP 558


>gi|126660983|ref|ZP_01732070.1| aspartyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126617723|gb|EAZ88505.1| aspartyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 598

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 68/183 (37%), Gaps = 19/183 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +  ++R Y   E  F+EI++  L   +P     ++           
Sbjct: 136 RRDRMAKNLQLRHAVVKAIRRYLEDEQGFMEIETPILTRSTPEGARDYLVPSRVNPGQWY 195

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S +
Sbjct: 196 ALPQ------SPQLFKQLLMVSGCDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSED 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++++    ++    +            N +       +T  +A  +Y   D   T  +  
Sbjct: 250 EILELNEGLVCSIFKTV---------KNIDLSRPFPRLTYQDAMDKY-GTDRPDTRFDLT 299

Query: 191 QPD 193
             D
Sbjct: 300 LVD 302



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 43/130 (33%), Gaps = 5/130 (3%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I    +              +P     LA++        + ++L    +E+      
Sbjct: 436 LLWITEFPMFEWNADEKRLEALHHPFTAPNLADLNDLATARAQAYDLVYNGVEIGGGSLR 495

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           +     Q   FE      +    E Y      L       P   GIA G DRLVML+ G 
Sbjct: 496 IYQKEIQEKVFETIGLSLE----EAYNKFGFLLEAFEYGTPPHGGIAYGLDRLVMLLAGE 551

Query: 337 NNINEVIWTP 346
           ++I +VI  P
Sbjct: 552 DSIRDVIAFP 561


>gi|330975332|gb|EGH75398.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 289

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 70/183 (38%), Gaps = 28/183 (15%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  +N F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + E ++     ++R   +                F +  ++T  EA  RY + 
Sbjct: 236 DIETSFLNEEDIIGLTEKMVRQLFKEVLDL----------EFGDFPHMTFEEAMRRYGSD 285

Query: 181 DLG 183
              
Sbjct: 286 KPD 288


>gi|153816116|ref|ZP_01968784.1| hypothetical protein RUMTOR_02364 [Ruminococcus torques ATCC 27756]
 gi|145846601|gb|EDK23519.1| hypothetical protein RUMTOR_02364 [Ruminococcus torques ATCC 27756]
          Length = 569

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 65/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ ++ + +  R++F E  F+E+++  L + +P     ++            
Sbjct: 113 RRADLQRNLMMKSQVMTLTRQFFSEEGFLEVETPVLGKSTPEGARDYLVPSRVHPGSFYG 172

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    ++
Sbjct: 173 LPQ------SPQLYKQLLMCSGFDRYIQIARCFRDEDLRADRQPEFTQIDMELSFVDVDE 226

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      +    +                    + +T  EA  R+   D        + 
Sbjct: 227 VIDVNERYLARVFKEVLGVDVP---------LPIQRMTWQEAMDRF-GSDKPDLRFGMEL 276

Query: 192 PD 193
            D
Sbjct: 277 TD 278



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q  +   ++  +  I    L+E  E              P  E         
Sbjct: 387 ALRVELAKQLELLDKNEFRFVWITEFPLLEWSEEQNRYVAMHHPFTMPMEEDLPLIDSDP 446

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K++     Y      L    
Sbjct: 447 GKVRAKAYDIVLNGNEIGGGSVRIFQDDIQEKMFEVLGFTKEQ----AYSQFGFLLDAFK 502

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 503 YGVPPHAGLAYGLDRLVMLMAKQDSIRDVIAFPKVK 538


>gi|317012431|gb|ADU83039.1| aspartyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 577

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 395 DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIE 454

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 455 CEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----HEEEVQKKFGFLL 510

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +N+I +VI  P
Sbjct: 511 EALKFGAPPHGGFAIGFDRLIMLMTKSNSIRDVIAFP 547



 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 66/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +    + +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDEDDVMGVVEDLLQEIFKAIGHD----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFRDSSNAIFSNIAQDPKNKRI 319


>gi|167756852|ref|ZP_02428979.1| hypothetical protein CLORAM_02401 [Clostridium ramosum DSM 1402]
 gi|167703027|gb|EDS17606.1| hypothetical protein CLORAM_02401 [Clostridium ramosum DSM 1402]
          Length = 585

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 76/196 (38%), Gaps = 22/196 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP +    + R+ I SS+R +   ++FI+I++  L   +P      R F     + +  
Sbjct: 128 RRPVMQNKIIMRHKITSSIRNFLDNHEFIDIETPYLNRSTPEG---ARDFLVPSRVHNG- 183

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 184 --SFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRLDRQPEFTQVDVEMSFMTTDE 241

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                      +T  EA  +Y  ID        + 
Sbjct: 242 IISIGEQLLAQVMKDVKG---------IELQLPLPRMTWHEAMEKY-GIDKPDIRFGLEL 291

Query: 192 PDRHLLYLQAQQAGIR 207
            + + +    +    +
Sbjct: 292 VNLNEVVKDVEFMVFK 307



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 45/149 (30%), Gaps = 11/149 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +    +  +  +    + E  +              P                   
Sbjct: 410 KELKLFNPDEFAFLWVVDFPMFEYDDETERYYAVHHPFTRPKDSDIDKIENDPANCLADA 469

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE---DFLACL-TEMP 317
           +++     EL      + +   Q   F       + +      ID     F+       P
Sbjct: 470 YDIVLNGFELGGGSQRIYEQELQERAF-------RALGFTQERIDSQFGWFVEAFQYGTP 522

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              G A+G DRL ML+TG+ NI EVI  P
Sbjct: 523 PHGGFALGLDRLAMLLTGSENIREVIAFP 551


>gi|289450177|ref|YP_003475045.1| aspartate--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184724|gb|ADC91149.1| aspartate--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 598

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 8/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ I + +  YF E+ F+EI++  L   +P     ++            
Sbjct: 140 RRPDMQRTLILRHNITNIIHRYFNEHGFLEIETPMLGRSTPEGARDYLVPSRVFPGHFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++    A  +R+ +     QPEFT ++   +  +   
Sbjct: 200 LPQ------SPQLYKQLLMVAGYDRYVQIARCFRDEDLRADRQPEFTQVDLEMSFVNPID 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++                         E     +   R+A      +      
Sbjct: 254 VQTVVEGLLAEIFAEIKGIKIDLPLQRMPYAEAMERFGSDKPDLRFAMEINNVSDWAAKL 313

Query: 192 PDRHLLYLQAQQAG 205
                    A   G
Sbjct: 314 DFAVFKNALALPKG 327



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +   +      +    L+E  E              P  E         
Sbjct: 413 QLRCEVAKRLNMIDENQYKLLWVTEFPLLEYSEEEHRYTAMHHPFTSPMEEDLPLLTSDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K +++     EL      + D   Q+  F      E++         E +     
Sbjct: 473 GAVRAKAYDVVLNGTELGGGSIRIHDQDLQKQMFGLLGFTEEQAFANFGFLLEAF----- 527

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  +    G A+G DRLVM ++G  +I +VI  P  Q++ +
Sbjct: 528 ----RYGVAPHGGCALGLDRLVMKLSGITDIRDVIAFPKVQTSAD 568


>gi|282852107|ref|ZP_06261465.1| aspartate--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282556867|gb|EFB62471.1| aspartate--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 617

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 74/226 (32%), Gaps = 15/226 (6%)

Query: 18  RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L K    R+ I  +  EYF EN FI+I++  L + SP     ++            
Sbjct: 136 RRPTLQKAIMLRSKILKATHEYFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    +Q
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMETSFTDEKQ 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY       +    D 
Sbjct: 250 VQDYTEGLLKKIMKDVMGIDLKTPIKRITWDEAMNKYGSDKPDTRYEMFIHDLSPIFKDS 309

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
             +      A    ++       +    +   +KIE          
Sbjct: 310 DFKVFSGAIADGGYVKGIAVKNGAK---QYSRKKIEEKQDYIKRYH 352



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ GI   +   +  +    L E  E              P  E         
Sbjct: 410 HLRREFAKETGIIPENVYDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+     KK+ Y E +      L  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAY-EQFGY---LLDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V   P
Sbjct: 526 MGFPPHAGLAIGLDRFAMMLAQKDNIRDVTAFP 558


>gi|291279933|ref|YP_003496768.1| aspartyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754635|dbj|BAI81012.1| aspartyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 599

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 21/191 (10%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RRRP    L+ R+ +  ++RE+  +  F++I++  L   +P     ++           
Sbjct: 140 LRRRPLQRNLILRHNLVRTIREFLYKKGFLDIETPFLTKSTPEGARDYLVPSRVNPGKFY 199

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K F     +R+ +     QPEFT L+   +    E
Sbjct: 200 ALPQ------SPQMFKQLLMISGFDKYFQIVKCFRDEDLRADRQPEFTQLDMEMSFIDRE 253

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            LM     +     +                      ++  EA  +Y   D   T     
Sbjct: 254 DLMDLIEEMFVEIFDKVLGLKIE---------RPFPRMSYTEAMEKY-GHDAPDTRFEMF 303

Query: 191 QPDRHLLYLQA 201
               + L    
Sbjct: 304 LKTINNLVDGC 314



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 42/142 (29%), Gaps = 17/142 (11%)

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
              L+E  E              P  E              K ++L     E+      +
Sbjct: 438 DFPLLEWDEEEKRYVAMHHPFTSPVDEDIPLFDTDPGKIRAKAYDLVLNGSEIGGGSIRI 497

Query: 279 LDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVM 331
                Q   F      E+E + K             F+  L    P   GIA G DR+  
Sbjct: 498 HRSDVQEKMFSVLGLTEEEREYKFG----------FFIEALRYGTPPHGGIAFGIDRIAS 547

Query: 332 LVTGANNINEVIWTPFSQSNQE 353
           +   A +I +VI  P +Q   +
Sbjct: 548 IFAKAESIRDVIAFPKTQKATD 569


>gi|284929420|ref|YP_003421942.1| aspartyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809864|gb|ADB95561.1| aspartyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 587

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 65/194 (33%), Gaps = 29/194 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNET-HI 59
           +   R R            L  R+ +  ++R Y  +   FIE+++  L   +P     ++
Sbjct: 114 ETRLRYRYLDLRREKMLSNLQLRHKVIKTIRHYLEDYQNFIEVETPILTRSTPEGARDYL 173

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
                       + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT 
Sbjct: 174 VPSRVNFGQWYALPQ------SPQLFKQLLMVSGFDRYYQVARCFRDEDLRADRQPEFTQ 227

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   +  S ++++     +I    +            N         +T       Y  
Sbjct: 228 LDMEMSFMSEDEILDLNEGLICHIFKTI---------KNVELSRPFPRLTYQYVMENY-G 277

Query: 180 IDLGTTLDNPDQPD 193
            D   T  +    D
Sbjct: 278 TDCPDTRFDLTLVD 291



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 41/133 (30%), Gaps = 11/133 (8%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              +    +              +P      +++        + ++L    IE+      
Sbjct: 425 LLWVTEFPLFEWNPDEQRFESLHHPFTCPNTSDLNDLTTARAQAYDLIFNGIEVGGGSLR 484

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLV 333
           +     Q+  F+        I      I   F   L       P   GIA G DRL+ML+
Sbjct: 485 IYQKDIQKKVFQT-------IGLSEEEIHNKFQFILDAFEYGAPPHGGIAYGLDRLIMLL 537

Query: 334 TGANNINEVIWTP 346
               +I +VI  P
Sbjct: 538 AEEESIRDVIAFP 550


>gi|57234484|ref|YP_181449.1| aspartyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|97196655|sp|Q3Z8K0|SYD_DEHE1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|57224932|gb|AAW39989.1| aspartyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 598

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 66/181 (36%), Gaps = 15/181 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+   S +R++  +  FIEI++  L   +P      R +     +    
Sbjct: 133 RRQGMKNNLIIRHKTVSFMRQFLNDRGFIEIETPILIKSTPEG---ARDYLVPSRLF--P 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG EK +  A  +R+ +     QPEFT L+   +      +
Sbjct: 188 GQFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQPEFTQLDMEMSFVDENDM 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M+   ++                  +     +   I+ A+A  +Y   D        +  
Sbjct: 248 MQLMEDLFTGLVASV--------RPDMKYNKKFPRISFADAMEKY-GCDKPDLRFGMELA 298

Query: 193 D 193
           D
Sbjct: 299 D 299



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A +  +   ++ +++ +    L +  E     +        P            
Sbjct: 417 EMRNHLAAKLDLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLESDLPLMDTDP 476

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
               ++ +++     E+      +     QR  F         +      IDE F   L 
Sbjct: 477 ARVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFH-------LLGYNNEQIDERFGHLLE 529

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G+A G DR VML+ G  +I EVI  P +Q+ Q+
Sbjct: 530 AFEFGAPPHGGVAPGIDRFVMLLAGETSIREVIPFPKNQAAQD 572


>gi|325579051|ref|ZP_08149007.1| aspartate--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159286|gb|EGC71420.1| aspartate--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 590

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++             +QN+      +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGL----------WQNIIGVDLGKFPQMTWQEAMTRF-GSDKPDLRNPLEL 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 48/153 (31%), Gaps = 6/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E                         P 
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFERDEEGNLAAMHHPFTSPKDFTPEQLEANPT 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           D      +++     E+      + DP  Q+  F    +       E +      L  L 
Sbjct: 469 DA-VANAYDMVINGYEVGGGSVRIFDPKMQQTVF----RILGINEQEQHEKFGFLLDALK 523

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 524 FGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|317048524|ref|YP_004116172.1| aspartyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316950141|gb|ADU69616.1| aspartyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 593

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +     F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQRLKTRAKITSFVRRFMDGEGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +IR                          +T AEA  RY   D     +  + 
Sbjct: 244 VREVMERLIRELWLDIKGVDLGN----------FPQMTFAEAMRRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLLKNVEFQVFSGPANDAKGRV 318



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 59/186 (31%), Gaps = 17/186 (9%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +     R  +    Q    +        D      + +
Sbjct: 382 ERTGAQDGDVIFFGADRAKVVSDALGALRLKVGRDLQITNDKAWAPLWVID----FPMFE 437

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            +   G+         P   +A       +      +++     E+      + +   Q+
Sbjct: 438 ADDEGGLAAMHHPFTSPKEMTASELAANPEQAIANAYDMVINGYEVGGGSVRIHNGNMQQ 497

Query: 286 HRF----EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
             F      E ++++K            L  L    P  +G+A G DR+ ML+TG +NI 
Sbjct: 498 AVFSILGIAEDEQREKFG--------FLLDALKFGTPPHAGLAFGLDRVTMLLTGTDNIR 549

Query: 341 EVIWTP 346
           +VI  P
Sbjct: 550 DVIAFP 555


>gi|113461366|ref|YP_719435.1| aspartyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123327310|sp|Q0I3S3|SYD_HAES1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|112823409|gb|ABI25498.1| aspartyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 585

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 20/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I + +R Y  EN F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQHLKTRAKITAFVRRYMDENGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +    ++                       +   +T  EA  R+ +   DL   L+  
Sbjct: 244 VREIMEKMVHGLWLNTIGVDLG----------KFPTMTWQEAMERFGSDKPDLRNPLEIV 293

Query: 190 DQPD 193
           D  D
Sbjct: 294 DVAD 297



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   +        
Sbjct: 408 ALRLKLGRDLGLTHLDEWKPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFTPEQLEANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E + +EK             
Sbjct: 467 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFHILGIDEDQQREKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 555


>gi|239616618|ref|YP_002939940.1| aspartyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239505449|gb|ACR78936.1| aspartyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 591

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 69/187 (36%), Gaps = 18/187 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  ++ R+ +  ++R Y  +N F+EI++  L   +P      R F     ++   
Sbjct: 134 RKPKMQRNIIFRHKVVQAVRNYLNKNNFLEIETPVLTKSTPEG---ARDFLVPSRLR--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 188 PGKFYALPQSPQLFKQLLMVAGFDRYYQIAKCYRDEDFRADRQPEFTQIDLEMSFADSED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++              + +N    +    +T  EA   Y   D        + 
Sbjct: 248 VFAIVEGMLSHTF---------KETLNVGLTTPFPRLTYEEAMEMY-GSDRPDRRYGMEL 297

Query: 192 PDRHLLY 198
            D    +
Sbjct: 298 HDVSEAF 304



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 10/153 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-- 257
           + ++  I     +        +    +            + +P     L ++        
Sbjct: 406 KLREKLISEEKPEVTGFDILWVTDFPMFSYNEEEGRIEAEHHPFTMPNLGDLDKFGKTEP 465

Query: 258 ---FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               +  ++L     EL +    +     Q   FE         + E        L    
Sbjct: 466 LKVRSHAYDLVINGYELASGSVRIHRRDIQNRIFE----MIGLTHEEAQEKFGFLLEAFK 521

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +GIA G DRLV ++ G ++I +VI  P
Sbjct: 522 YGPPPHAGIAFGLDRLVAIMVGTSSIRDVIAFP 554


>gi|255562164|ref|XP_002522090.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223538689|gb|EEF40290.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 668

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 76/191 (39%), Gaps = 22/191 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQ 69
            RR+     ++ R+ +   +R Y  +   F+EI++  L   +P     ++     +    
Sbjct: 215 LRRQQMNFNMMLRHRVVKLIRRYLEDVYGFVEIETPILSRSTPEGARDYLVPSRVQPGTF 274

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
             + +      SP+   + L+ +G +K +  A  +R+ +     QPEFT L+   A    
Sbjct: 275 YALPQ------SPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQPEFTQLDMELAFTPL 328

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E ++K   ++IR                     +    +T AEA +RY   D   T  + 
Sbjct: 329 EDMLKLNEDLIRKVFLEIKGVQLP---------NPFPRLTYAEAMSRY-GSDRPDTRFDL 378

Query: 190 DQPDRHLLYLQ 200
           +  D   ++L+
Sbjct: 379 ELIDVSDIFLE 389



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 44/141 (31%), Gaps = 15/141 (10%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
           D        +    +              +P       ++          +++    +E+
Sbjct: 509 DHSRHSILWVTDFPMFEWNDTEQRLEALHHPFTAPNPEDMEDLSSARALAYDMVYNGVEI 568

Query: 272 CNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
                 +     Q+   E      ++ +EK     E   +           P   GIA G
Sbjct: 569 GGGSLRIYKREIQQKVLEIVGISAEQAEEKFGYLLEALDM---------GAPPHGGIAYG 619

Query: 326 FDRLVMLVTGANNINEVIWTP 346
            DRLVML+  AN+I +VI  P
Sbjct: 620 LDRLVMLLADANSIRDVIAFP 640


>gi|94676957|ref|YP_588764.1| aspartyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123384132|sp|Q1LTF0|SYD_BAUCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|94220107|gb|ABF14266.1| aspartyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 589

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 73/218 (33%), Gaps = 20/218 (9%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            +      N +   + R            L  R  I S +R +  +  F++I++  L   
Sbjct: 109 PLDINFHNNEEQRLKFRYLDLRNPEMAQRLKLRAKITSLVRHFMEKKGFLDIETPMLTKT 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGQFYALPQ------SPQLFKQLLMISGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  + EQ+ K   +++R       +             +   + + 
Sbjct: 223 ADRQPEFTQIDVEASFINAEQICKIMEDLVRHLWREIQEVELENFQYMSYTAAMYRFGSD 282

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                    I++   +D        +L   A+    RV
Sbjct: 283 KPDLRN--PIEIVDVVDLVKNTTCTILADIAKDIKNRV 318



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 69/220 (31%), Gaps = 8/220 (3%)

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +    +  I        +        +   +  PE I          + D+       +
Sbjct: 340 YIQTYGIKFIIWMKVYQGKDGVKTTQSSITKYLLPEDIMSIIERTGACDGDILFFAAGNN 399

Query: 191 QPDRHLLYLQAQQAG--IRVAHDDTWSDI-FSRILIEKIEPNLGINCCTILDRYPAPESA 247
               +++     + G  +++  +++W+ +      + + +    ++        P     
Sbjct: 400 NIINNVMGALRIKLGCDLKLNRENSWAPLWIVDFPMFEKDDEGNLHAVHHPFTAPKNIDI 459

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
              +          +++     E+ +    +     Q+  F      +    NE      
Sbjct: 460 PTLLQYPLKAKANAYDMVINGYEVGSGSVRIHCAELQQTIFSILGMTR----NEQSSKFG 515

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F+  L    P  +G A G DRLVML+T   NI +VI  P
Sbjct: 516 FFIDALKYGAPPHAGFAFGLDRLVMLLTSTENIRDVIAFP 555


>gi|224103793|ref|XP_002313196.1| predicted protein [Populus trichocarpa]
 gi|222849604|gb|EEE87151.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 73/190 (38%), Gaps = 21/190 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQ 69
            RR+     ++ R+ +   +R Y  +   F+EI++  L   +P     ++     +    
Sbjct: 207 LRRQQMSSNIMLRHRVVKLIRRYLEDVQGFVEIETPILSRSTPEGARDYLVPSRIQPGTF 266

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
             + +      SP+   + L+ +G +K +  A  +R+ +     QPEFT L+   A  + 
Sbjct: 267 YALPQ------SPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQPEFTQLDMELAFTTL 320

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E +++   ++IR                     +    +T AEA ++Y +    T  D  
Sbjct: 321 EDMLRLNEDLIRKVFLEIKGVQLP---------NPIPRLTYAEAMSKYGSDRPDTRFDLH 371

Query: 190 DQPDRHLLYL 199
            +    +   
Sbjct: 372 LKEVSDIFAE 381



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 42/141 (29%), Gaps = 15/141 (10%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
           D        +    +              +P       ++          +++    +E+
Sbjct: 501 DHSRHSILWVTDFPMFEWNETEQRLEALHHPFTAPNPEDMEDLSSARALAYDMVYNGVEI 560

Query: 272 CNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
                 +     Q+   E      ++ + K     E   +           P   GIA G
Sbjct: 561 GGGSLRIYKREVQQKVLEIVGISPEQAEAKFGYLLEALDM---------GAPPHGGIAYG 611

Query: 326 FDRLVMLVTGANNINEVIWTP 346
            DRL ML+ GA +I +VI  P
Sbjct: 612 LDRLAMLLAGATSIRDVIAFP 632


>gi|303279314|ref|XP_003058950.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460110|gb|EEH57405.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 679

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R     +LR     ++ F+EI++  L   +P     ++     +     
Sbjct: 204 RRPRMVKNLRLRAKTVRALRGVLEDDHGFLEIETPMLTRSTPEGARDYLVPSRLQPGACY 263

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   A    +
Sbjct: 264 ALPQ------SPQLFKQMLMVAGADRYYQVARCFRDEDLRADRQPEFTQLDIEMAFTDMD 317

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++    +++  A           + V+         +T AEA ++Y +           
Sbjct: 318 GILSLGEDLMCAAF---------KEGVDVTLPRPFPRMTYAEAMSKYGSDKPDVRYGLEF 368

Query: 191 QPDRHLLYLQAQQA 204
                +    A + 
Sbjct: 369 TTITDIASRCAFKL 382



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 42/139 (30%), Gaps = 8/139 (5%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD---PRFTKRFELYACN 268
              +     I    +              +P       ++             ++L    
Sbjct: 499 PDDAHAVLWITEFPMFEKNEDEDRLEALHHPFTAPNQDDVRDGGDITKARAVAYDLVYNG 558

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFD 327
           +E+      +     Q   F+     K+    E        +       P   G+A G D
Sbjct: 559 VEVGGGSLRIYRRDVQEKVFDAIGLSKE----EAEEKFGYLMDAFQFGAPPHGGMAFGLD 614

Query: 328 RLVMLVTGANNINEVIWTP 346
           RLVM++ GA++I +VI  P
Sbjct: 615 RLVMMLAGASSIRDVIAFP 633


>gi|299768800|ref|YP_003730826.1| aspartyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298698888|gb|ADI89453.1| aspartyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 594

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 74/208 (35%), Gaps = 21/208 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R YF +N F+++++  L   +P     ++     +      
Sbjct: 134 RRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLVPSRVQNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-SYE 130
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +     +
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDVETSFMSDDD 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +    +  ++   E+   K           F + + +T A+A   YA+ D         
Sbjct: 248 IMDLMEVLTVKMFDELLGVK-----------FDKFQRMTYADAMRDYAS-DKPDMRIPLK 295

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
             D   L  + +         D    I 
Sbjct: 296 LVDVADLMQEVEFKVFAGPAKDPKGRIV 323



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KIGHDLNLATCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEEVKSNPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS----DEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TGA +I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLVMLMTGATSIRDVIAFPKTKTAE 562


>gi|262281084|ref|ZP_06058866.1| aspartyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257315|gb|EEY76051.1| aspartyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 595

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 74/208 (35%), Gaps = 21/208 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R YF +N F+++++  L   +P     ++     +      
Sbjct: 134 RRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLVPSRVQNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-SYE 130
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +     +
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDVETSFMSDDD 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +    +  ++   E+   K           F + + +T A+A   YA+ D         
Sbjct: 248 IMDLMEVLTVKMFDELLGVK-----------FDKFQRMTYADAMRDYAS-DKPDMRIPLK 295

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
             D   L  + +         D    I 
Sbjct: 296 LVDVADLMQEVEFKVFAGPAKDPKGRIV 323



 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KIGHDLNLSTCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEEVKSNPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS----DEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TGA +I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLVMLMTGATSIRDVIAFPKTKTAE 562


>gi|237734562|ref|ZP_04565043.1| aspartyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382382|gb|EEO32473.1| aspartyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 587

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 76/196 (38%), Gaps = 22/196 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP +    + R+ I SS+R +   ++FI+I++  L   +P      R F     + +  
Sbjct: 130 RRPVMQNKIIMRHKITSSIRNFLDNHEFIDIETPYLNRSTPEG---ARDFLVPSRVHNG- 185

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 186 --SFYALPQSPQLFKQLLMVSGFERYYQIARCFRDEDLRLDRQPEFTQVDVEMSFMTTDE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                      +T  EA  +Y  ID        + 
Sbjct: 244 IISIGEQLLAQVMKDVKG---------IELQLPLPRMTWHEAMEKY-GIDKPDIRFGLEL 293

Query: 192 PDRHLLYLQAQQAGIR 207
            + + +    +    +
Sbjct: 294 VNLNEVVKDVEFMVFK 309



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 45/149 (30%), Gaps = 11/149 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +    +  +  +    + E  +              P                   
Sbjct: 412 KELKLFNPDEFAFLWVVDFPMFEYDDETERYYAVHHPFTRPKDSDIDKIENDPANCLADA 471

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE---DFLACL-TEMP 317
           +++     EL      + +   Q   F       + +      ID     F+       P
Sbjct: 472 YDIVLNGFELGGGSQRIYEQELQERAF-------RALGFTQERIDSQFGWFVEAFQYGTP 524

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              G A+G DRL ML+TG+ NI EVI  P
Sbjct: 525 PHGGFALGLDRLAMLLTGSENIREVIAFP 553


>gi|53804174|ref|YP_114214.1| aspartyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|62287536|sp|Q607I4|SYD_METCA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|53757935|gb|AAU92226.1| aspartyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 599

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 74/215 (34%), Gaps = 29/215 (13%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   R R            +  R  I   LR +   + F EI++  L   +P     +
Sbjct: 119 NEEMRLRYRYIDLRRPVMQQRMRLRRDITRFLRNFLDHHGFYEIETPFLTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +    T       + +      SP+   + L+ +G ++ +     +R+ +     QPEFT
Sbjct: 179 LVPSRTHPHSFFALPQ------SPQLYKQLLMISGMDRYYQVVRCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   +  + +Q+M     +IR        +                 +T AEA  RYA
Sbjct: 233 QLDIETSFMNEDQIMTLMEAMIRDLFRETLNEELP---------DPFPRMTYAEAMRRYA 283

Query: 179 N--IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
           +   DL   L+  D  D          AG     +
Sbjct: 284 SDKPDLRIPLELVDIADLMAGVEFKVFAGPAADPE 318



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 48/144 (33%), Gaps = 6/144 (4%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           V        +    + E  E +            P          P     ++ +++   
Sbjct: 423 VEKGWRPLWVTDFPMFEWDEKSGRWVALHHPFTAPKCSEEQLRQNPGRA-LSRAYDMVLN 481

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +     Q+  F+           E        L  L    P   G+A G 
Sbjct: 482 GTEIGGGSVRIHRTEMQQTVFD----LLGIGEEEAQQKFGFLLNALRYGCPPHGGLAFGL 537

Query: 327 DRLVMLVTGANNINEVIWTPFSQS 350
           DRLVML++GA++I EV+  P +QS
Sbjct: 538 DRLVMLMSGASSIREVMAFPKTQS 561


>gi|313677050|ref|YP_004055046.1| aspartyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312943748|gb|ADR22938.1| aspartyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 581

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 72/221 (32%), Gaps = 11/221 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +  + R +     F+E+++  L   +P      R F     +    
Sbjct: 133 RRPAVREKLKLRHQLMQATRRFMDGEGFLEVETPVLIKSTPEG---ARDFVVPSRVH--- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G +K F     +R+ +     QPEFT ++   +    E 
Sbjct: 187 EGEFYALPQSPQTFKQLLMVSGFDKYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++   +    K    ++     + +   +  ++       +      D    
Sbjct: 247 ILNTFEEMVKYLFKEV--KGVEIEDFERMTYDQAMKLYGSDKPDIRFGMPFVELNDQTQG 304

Query: 192 PDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLG 231
              ++        GI V    +        +      P +G
Sbjct: 305 KGFNVFDQAELVVGINVPSASEYTRKQLDALTEYVKRPQIG 345



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 9/172 (5%)

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
            +D+  +    L      + G+R  +      +    L+E  E     +        P  
Sbjct: 394 EIDHTRRAMNELRLKMGSELGLRDKNVFKPLWVLDFPLLEWDEETKRFHAMHHPFTSPKL 453

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNET 302
           E                +++    +E+      + D   Q+  F      K       E 
Sbjct: 454 EDMEFIESDPGRIRANAYDMVINGVEIGGGSIRIHDKSLQQKMF------KALGFTEEEA 507

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  +       P   GIA GFDRL  +  G+++I + I  P + + ++
Sbjct: 508 QKQFGFLMEAFEYGAPPHGGIAFGFDRLCAMFGGSDSIRDYIAFPKNNAGRD 559


>gi|89898734|ref|YP_515844.1| aspartyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|89332106|dbj|BAE81699.1| aspartyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 584

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 59/432 (13%), Positives = 107/432 (24%), Gaps = 110/432 (25%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHI----- 72
             L+ R+ +  + R+Y     F E+ +  L + +P     ++            +     
Sbjct: 142 DRLIYRHKVMMACRQYMDTQGFTEVVTPVLGKSTPEGARDYLVPSRIYPGSFYALPQSPQ 201

Query: 73  ---------RKPLYLQTSPEF------------SCKKLLAAGE----------EKIFCFA 101
                        Y Q +  F              +  +              E++    
Sbjct: 202 LFKQILMVGGLDRYFQIATCFRDEDLRADRQPEFSQIDIEMSFATPENLFPIIEQLVVEI 261

Query: 102 HAWRNGEQGCLHQPEFT---MLEWYRAHE----------SYEQLMKDCMNIIRCAAEVAN 148
            + R         P  T     + Y   +             +  K+    I        
Sbjct: 262 FSVRGINIDL-PLPRMTYQEAKDLYGTDKPDLRFGLQLRDCREHAKEFSFSIFLDQLAQG 320

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYA-----------------------NIDLGTT 185
             I  F        S  +     E   RY                               
Sbjct: 321 GTIKGFCVPGGADMSRKQLDIYTEFVKRYGAMGLVWIKKQENSVASNVAKFASEEVFKAM 380

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
             + D  D  +L L A    +     D    + ++      E          +  +P   
Sbjct: 381 FADFDAKDNDILLLIAAPESVANQSLDHLRRLIAKERNLYDESQYNF---VWITDFPLFA 437

Query: 246 SALANIYPADPRFTKR-------------------FELYACNIELCNACDELLDPIEQRH 286
                I      FT                     ++L     E+ +    + +   Q  
Sbjct: 438 KEDGKICSEHHPFTAPLEEDIPLLDTDPLSVRSSSYDLVLNGYEIASGSQRIHNADLQNK 497

Query: 287 RFEKEMQ----EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
            F          K+K           F+  L+   P   GIA+G DR++M++T A +I E
Sbjct: 498 IFSILELSPESIKEKFG--------FFIDALSFGTPPHLGIALGLDRIMMVLTRAESIRE 549

Query: 342 VIWTPFSQSNQE 353
           VI  P +Q   +
Sbjct: 550 VIAFPKTQKAAD 561


>gi|170719031|ref|YP_001784189.1| aspartyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189082101|sp|B0USU0|SYD_HAES2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|168827160|gb|ACA32531.1| aspartyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 588

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 20/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I + +R Y  EN F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQHLKTRAKITAFVRRYMDENGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +    ++                       +   +T  EA  R+ +   DL   L+  
Sbjct: 245 VREIMEKMVHGLWLNTIGVDLG----------KFPTMTWQEAMERFGSDKPDLRNPLEIV 294

Query: 190 DQPD 193
           D  D
Sbjct: 295 DVAD 298



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 57/189 (30%), Gaps = 21/189 (11%)

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            +  +       +   D   T  +       L     +  G+    +     +    + E
Sbjct: 382 FDRTSAQSDDILFFGADKWQTATD---AMGALRLKLGRDLGLTHLDEWKPLWVIDFPMFE 438

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           + E              P   +               +++     E+      + DP  Q
Sbjct: 439 RDEEGNLAAMHHPFTS-PKDFTPEQLEANPTSAVANAYDMVINGYEVGGGSVRIFDPKMQ 497

Query: 285 RHRF------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
           +  F      E + +EK              L  L    P  +G+A G DRL ML+TG +
Sbjct: 498 QTVFHILGIDEDQQREKFG----------FLLDALKFGTPPHAGLAFGLDRLTMLLTGTD 547

Query: 338 NINEVIWTP 346
           NI +VI  P
Sbjct: 548 NIRDVIAFP 556


>gi|282855649|ref|ZP_06264960.1| aspartate--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282586497|gb|EFB91754.1| aspartate--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 602

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 62/190 (32%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              R +  L  R+ +    R Y     F E+++  L + +P     ++            
Sbjct: 144 RRERMQNNLRTRHEVAQYTRAYLNGRDFTEVETPILMKSTPEGARDYLVPSRVTPGSFYA 203

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 204 LPQ------SPQLFKQILMISGMDRYYQIAKCFRDEDLRADRQPEFTQVDLEMSFVTEED 257

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +     +    +       +         +    +   EA  R+   D        + 
Sbjct: 258 VYELLEGYVVGLWKKILGVEIT---------APFRRLGYREAMRRF-GSDKPDLRIPFEI 307

Query: 192 PDRHLLYLQA 201
            D    +   
Sbjct: 308 HDVSAAFEGC 317



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 54/160 (33%), Gaps = 6/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+  G+     +        +L    + N  +       +    +       PA
Sbjct: 418 QLRLDVAKAHGLVREGWEFLWVTNFPLLEWSPDENRWVATHHPFTQPNPEDLPYLESDPA 477

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               ++ ++L    IE+      + D   Q   F+           E       FL  L 
Sbjct: 478 RCG-SRTYDLVLNGIEVGGGSIRIHDEEVQEKVFKCL----AFTPEEAQSRFGFFLDALK 532

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A+GFDRL ML+ G   I EV+  P +   Q+
Sbjct: 533 YGTPPHGGLAIGFDRLCMLLCGCKGIREVMAFPKTAKAQD 572


>gi|89889509|ref|ZP_01201020.1| aspartyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517782|gb|EAS20438.1| aspartyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 582

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 88/299 (29%), Gaps = 28/299 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+ +   +R +     FIE+++  L   +P      R F     + +   +   
Sbjct: 138 RENLIFRSKVAMEVRNFLAGKDFIEVETPVLIKSTPEG---ARDFVVPSRMNE--GQFYA 192

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+  G +K F     +R+ +     QPEFT ++   +    E ++    
Sbjct: 193 LPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDVLNIFE 252

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGTTLDNP 189
           ++ R   +       +              +T  +A  +Y          ++ G      
Sbjct: 253 DMTRHLLKKVKNIDVAN----------FPRMTYEDAMKKYGNDKPDIRFGMEFGELDAFA 302

Query: 190 DQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
              D  +        GI V   +        +++     P +G      +          
Sbjct: 303 KAKDFKIFNEAELVVGIAVPGANSYTRKEIDKLIDWVRRPQVGALGMVYVRCNEDGTYKS 362

Query: 249 ANIYPADPRFTKRF---ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           +     D      +           +C           Q      EM E+  + +    
Sbjct: 363 SVDKFYDQEDLANWAKATGAKAGDLICVLSGPANKTRTQLSALRMEMAERLGLRDPEVF 421



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R         +    L+E  E     +        P PE         
Sbjct: 404 ALRMEMAERLGLRDPEVFAPLWVVDFPLLEWDEDTERYHAMHHPFTSPKPEDIDKLETDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q   F+       + + +            +
Sbjct: 464 GNVRANAYDLVMNGNEIGGGSVRIFDKKLQALMFDHLGFTPDEARAQFG--------FLM 515

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P  +G+A GFDRLV ++ G   I + I  P
Sbjct: 516 DAFEYGAPPHAGLAFGFDRLVSILGGQETIRDFIAFP 552


>gi|154505862|ref|ZP_02042600.1| hypothetical protein RUMGNA_03404 [Ruminococcus gnavus ATCC 29149]
 gi|153793880|gb|EDN76300.1| hypothetical protein RUMGNA_03404 [Ruminococcus gnavus ATCC 29149]
          Length = 612

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 65/178 (36%), Gaps = 17/178 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ + +  R++F E  F+EI++  L + +P     ++            
Sbjct: 153 RRPDLQRNLRMRSQVTTLARQFFAEEGFLEIETPILGKTTPEGARDYLVPSRVHPGSFYG 212

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    + 
Sbjct: 213 LPQ------SPQLYKQLLMCSGCDRYIQIAKCFRDEDLRADRQPEFTQIDMELSFVDVDD 266

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           +++     +    +            + +     + +T  EA  RY +    T     
Sbjct: 267 VIEVNERFLAKLFKEVL---------DVDVQLPIQRMTWQEAMDRYGSDKPDTRFGME 315



 Score = 89.3 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  +   +   +  +    L+E  +              P  E      +  
Sbjct: 427 NLRLELAKQMELLDKNQYNFLWVTEFPLLEWSDEQNRYLAMHHPFTMPMEEDLQYIDFEP 486

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K++     Y      L    
Sbjct: 487 GRVRAKAYDIVLNGNEIGGGSVRIFQNDVQEKMFEVLGFTKEQ----AYEQFGFLLDAFK 542

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DR+VML+   ++I +V+  P  +
Sbjct: 543 YGVPPHAGLAYGLDRMVMLMAKEDSIRDVMAFPKIK 578


>gi|94987429|ref|YP_595362.1| aspartyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731678|emb|CAJ55041.1| Aspartyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 599

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 20/181 (11%)

Query: 18  RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP + K    R+     +R Y   + F+EI++  L   +P      R F     +  + 
Sbjct: 150 RRPVMKKNIILRSNAMQIIRNYLSSHGFLEIETPFLTKSTPEG---ARDFLVPSRL--YH 204

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   +  + AG ++ F     +R+ +     QPEFT ++   +  + EQ+
Sbjct: 205 GKLFALPQSPQIFKQLCMVAGLDRYFQITRCFRDEDLRADRQPEFTQIDIEMSFVNEEQV 264

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M+   ++++   + A     S              IT  EA  +Y  +D        +  
Sbjct: 265 MECAEHLMQTLFQEALSTEIS---------LPFPRITWFEAMKQY-GVDKPDIRFGLELH 314

Query: 193 D 193
           D
Sbjct: 315 D 315



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 47/145 (32%), Gaps = 7/145 (4%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G+   +  ++  +    L E  E       C      P                 + ++
Sbjct: 428 LGLIPQNTWSFVWVTDFPLYEYSEEERRYVSCHHPFTAPKESDIHFMKTNPAEVKARAYD 487

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSG 321
           L     E+      +     QRH FE           E        F+  L    P   G
Sbjct: 488 LVLNGNEVGGGSIRIHQAEIQRHLFEDL-----GFSLEDIQQQFGFFIEALEYGAPPHGG 542

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DRLVML++ + +I +VI  P
Sbjct: 543 IAFGLDRLVMLMSNSESIRDVIAFP 567


>gi|315126202|ref|YP_004068205.1| aspartate tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315014716|gb|ADT68054.1| aspartate tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 592

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  EN F++I++  L   +P     ++            
Sbjct: 130 RRLEMSDRIKLRAKASSFVRRFLDENGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDLETSFMSSDQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR            +Q++      +   +  +EA + Y   D     +    
Sbjct: 244 VRGMTEKMIREM----------WQSLLNVDLGDFPIMPYSEAMSLY-GSDKPDLRNPMKL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 IDVADLVKDVEFKVFSGPANDEKGRV 318



 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 54/148 (36%), Gaps = 12/148 (8%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + + + D+W+ ++        E + G ++        P   SA           +  +
Sbjct: 415 IDLEITNLDSWAPLWVVDFPMFEEDDEGTLHAVHHPFTAPKDISASELEANPAAAISDAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQ 318
           ++     E+      + +   Q   F         +  E     + F   L  L    P 
Sbjct: 475 DMVLNGYEVGGGSVRIHNADMQEAAFRI-------LGIEAQEQQDKFGFLLDALKYGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRLVML+ G +NI +VI  P
Sbjct: 528 HAGLAFGLDRLVMLLCGTDNIRDVIAFP 555


>gi|123969430|ref|YP_001010288.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166225376|sp|A2BTS0|SYD_PROMS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123199540|gb|ABM71181.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 598

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 68/192 (35%), Gaps = 26/192 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L KR+ I    RE+     F E+++  L   +P      R 
Sbjct: 125 ELRLKYRYLDLRRGKLLENLKKRHKIIKVAREFLDNFGFTEVETPLLTKSTPEG---ARD 181

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     + +   +   L  SP+   + L+  G +K +  A  +R+ +     QPEFT L+
Sbjct: 182 FLVPARLSN--GEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQPEFTQLD 239

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  S E+++    ++I+   +            N N  +    +T   A   Y   D
Sbjct: 240 IEMSFISEEEIISFNESLIKKIWKEVL---------NINFNNAFPRMTWQAAMDNY-GTD 289

Query: 182 LGTTLDNPDQPD 193
              T       D
Sbjct: 290 RPDTRYQMLLKD 301



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 14/154 (9%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN---IYPADP 256
            A++  +       +  +    + E+ E              P    +  +       + 
Sbjct: 420 IAKELNLIDKSKWNFLWVTDFPMFERNEDENRYEALHHPFCSPKNIKSKDSENLKKEIES 479

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL 313
                ++L    +EL      + +   QR   +        +      IDE F   +  L
Sbjct: 480 STANAYDLVLNGLELGGGSLRIHEANLQRQVLKT-------VGLTDKEIDEKFGFLIEAL 532

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA G DR+ ML+ GA++I E I  P
Sbjct: 533 EMGAPPHGGIAFGLDRITMLIIGADSIRETIAFP 566


>gi|317128224|ref|YP_004094506.1| aspartyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315473172|gb|ADU29775.1| aspartyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 596

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 68/195 (34%), Gaps = 9/195 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    +  RN     +R++  EN F+EI++  L   +P     ++            
Sbjct: 135 RRPKMFETMQLRNRTTKLIRDFLDENTFMEIETPMLTKSTPEGARDYLVPSRVHPGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++   +    E+
Sbjct: 195 LPQ------SPQLFKQLLMVSGFERYYQVARCFRDEDLRADRQPEFTQIDIEASFLGKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L+     ++    +       +                  +   R+  ++L       + 
Sbjct: 249 LLAMMEQLMAKLLKELKGITVTTPFQRLTHSEAMNRFGSDKPDTRF-GMELIDVSKAVED 307

Query: 192 PDRHLLYLQAQQAGI 206
            D  +     ++ G+
Sbjct: 308 SDFGVFANTVKKGGV 322



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 49/157 (31%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    L+   E              P  E     +   
Sbjct: 410 ALRLKFAKEHSLIDESKFNFLWVTDFPLLSYDEDEKRYVAEHHPFTRPINEDVEKLVTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +    + ++L     EL      + +   Q   F      E + K +            L
Sbjct: 470 EEVRAEAYDLVLNGYELGGGSQRIYERELQEQMFSALGFTEEEAKSQFG--------FLL 521

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   GIA+G DRLVM++ G +N+ E I  P
Sbjct: 522 EAFEYGTPPHGGIALGLDRLVMILAGRSNLRETIAFP 558


>gi|295426089|ref|ZP_06818759.1| aspartate--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064258|gb|EFG55196.1| aspartate--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 618

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 67/196 (34%), Gaps = 12/196 (6%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R  I  ++ E+F EN FI+I++  L + SP     ++            
Sbjct: 136 RRPTLQRAIILRAKILKAVHEFFDENGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMETSFLDEKG 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                          +   RY       +    D 
Sbjct: 250 VEDYTEGLLKKVMKDVMGIDLKTPIKRITWTESMNKYGCDKPDTRYEMFIHDLSPIFKDS 309

Query: 192 PDRHLLYLQAQQAGIR 207
             +      A    ++
Sbjct: 310 DFKVFSGAIADGGYVK 325



 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A +  I       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAHETDIIPKGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+     K++ Y E +      +  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKRRAY-EQFGY---LMDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DR  M++   +NI +V   P
Sbjct: 526 MGFPPHAGLAIGLDRFAMMLAQKDNIRDVTAFP 558


>gi|168187503|ref|ZP_02622138.1| aspartyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294589|gb|EDS76722.1| aspartyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 593

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 70/200 (35%), Gaps = 21/200 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+     LR++  EN F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQRIFKIRHKTAKVLRDFLDENGFLEMETPMLTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K F     +R+ +     QPEFT ++   +    E 
Sbjct: 193 PGMFYALPQSPQLFKQLLMVSGYDKYFQITKCFRDEDLRANRQPEFTQVDMELSFVDMED 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I+   +            N +     + IT  EA  +Y   D        + 
Sbjct: 253 VIALNERLIQKVFKEI---------ANVDVQLPIQRITYKEAMDKY-GSDKPDLRFGMEI 302

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            D   +    +    +V  D
Sbjct: 303 ND---ITDAVKDVDFKVFKD 319



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 46/154 (29%), Gaps = 6/154 (3%)

Query: 195 HLLYLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
            L    A++  I +   +  ++ +    L+   E                 E        
Sbjct: 412 ALRLEMAKRLEILKDNKEFRFAWVTEFPLLSYNEEEDRYQAEHHPFTMSMDEDIQYLESD 471

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                 K +++     EL      + D   Q   F       +      +      L   
Sbjct: 472 PGRVRAKAYDIVLNGEELGGGSIRIHDTKLQEKMFNVLGFTSES----AWERFGFLLEAF 527

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A GFDR++M + G  NI +VI  P
Sbjct: 528 KFGPPPHGGLAYGFDRMIMFLAGTENIKDVIAFP 561


>gi|126642918|ref|YP_001085902.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 554

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 70/207 (33%), Gaps = 21/207 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R Y  ++ F+++++  L   +P     ++     +      
Sbjct: 96  RRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLVPSRVQNGSFYA 155

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-SYE 130
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +     +
Sbjct: 156 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLNDDD 209

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +       I+   ++   K           F +   +  +EA   YA+ D         
Sbjct: 210 IMDLMEGMTIKLFNDLLGVK-----------FEKFRRMPYSEAMRDYAS-DKPDLRIPLK 257

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             D   L  + +         D    I
Sbjct: 258 LVDVADLMQEVEFKVFAGPAKDPKGRI 284



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 377 KIGHDLNLATCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEDVKSNPGEALS 434

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 435 VAYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS----DEEAEEKFSFLLNALRYGAPP 490

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TGA +I +VI  P +++ +
Sbjct: 491 HGGLAFGLDRLVMLMTGATSIRDVIAFPKTKTAE 524


>gi|119471739|ref|ZP_01614099.1| aspartate tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119445362|gb|EAW26650.1| aspartate tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 592

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  EN F++I++  L   +P     ++            
Sbjct: 130 RRLEMSDRIKLRAKASSFVRRFLDENGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDLETSFMSSDQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR            +Q++      +   +  +EA + Y   D     +    
Sbjct: 244 VRGMTEKMIREM----------WQSLLNVDLGDFPIMPYSEAMSLY-GSDKPDLRNPMKL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 10/146 (6%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + + + ++W+ ++        E + G ++        P   SA           +  ++
Sbjct: 416 DLEITNLNSWAPLWVVDFPMFEEDDEGTLHAVHHPFTAPKDISASELEANPAAAISDAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQSS 320
           +     E+      + +   Q   F      +    +     D+    L  L    P  +
Sbjct: 476 MVLNGYEVGGGSVRIHNADMQEAAF------RILGIDAQEQQDKFGFLLDALKYGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DRLVML+ G +NI +VI  P
Sbjct: 530 GLAFGLDRLVMLLCGTDNIRDVIAFP 555


>gi|62287580|sp|Q74IX4|SYD_LACJO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 614

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 21/177 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R+ I  ++ EYF E  FI+I++  L + SP     ++            
Sbjct: 133 RRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMETSFLDEQG 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +      ++         K      +N +  +  + IT  EA  +Y +    T  + 
Sbjct: 247 VQDYTEGLL---------KKIMKDVMNIDLKTPIKRITWDEAMNKYGSDKPDTRYEM 294



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A + GI       +  +    L E  E              P  E         
Sbjct: 407 HLRREFAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+     KK+ Y E +      +  L 
Sbjct: 467 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAY-EQFGY---LMDALD 522

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DRL M++ G +NI +V   P
Sbjct: 523 MGFPPHAGLAIGLDRLAMMLAGKDNIRDVTAFP 555


>gi|17556372|ref|NP_499478.1| hypothetical protein Y66D12A.23 [Caenorhabditis elegans]
 gi|15795206|emb|CAC70140.1| C. elegans protein Y66D12A.23, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 448

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 51/336 (15%), Positives = 95/336 (28%), Gaps = 54/336 (16%)

Query: 11  NRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAF 62
            +  H R R       L  R+ I     E+F+   FI ID+  L  +    G E      
Sbjct: 103 RKKTHLRARNSKFAALLRARSAIFRETHEFFMSRDFIHIDTPKLTRNDCEGGGEVFDVVT 162

Query: 63  STELIIQDHI--RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTM 119
           +T     D     +P++L  S +    + + +  ++++    ++R   +Q   H  EF M
Sbjct: 163 TTSTEAGDGGLKEEPMFLSVSSQLHL-EAMVSRLQRVYILGPSFRAERQQSHAHLSEFHM 221

Query: 120 LEWYRAHESYEQLMKDCMN-IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           LE   A       M   +   I+      N      +            I       RY 
Sbjct: 222 LEAEVAFVETIDEMCTLVESYIQHMISYLNSSKLEPETAIIGSKIPISNIKF--PRIRY- 278

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
                         D  +  L  + + +      +  +    +        L  +    +
Sbjct: 279 --------------DEAVHLLALKGSKVTAKSGFSKKNELDLV-------KLHDDHPIFV 317

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP  +             +    +         +  E      QR             
Sbjct: 318 THYPVGQKPFYMARDGQLTLSFDLLVPGIGELAGGSLREQSAEELQRR------------ 365

Query: 299 YNETYPIDEDFLAC-LTEMPQSSGIAMGFDRLVMLV 333
                 ID  +L       P + G  +GF+R++  +
Sbjct: 366 ---GCGIDW-YLEMRRRGQPPTGGFGIGFERMLQYL 397


>gi|291524449|emb|CBK90036.1| aspartyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 598

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 69/182 (37%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +   +R++     F+EI++  L + +P     ++            
Sbjct: 141 RRPDIQRNLMLRSNVLRVMRDFMANEGFLEIETPILCKSTPEGARDYLVPSRIHHGHFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+A+G ++ F  A  +R+ +     QPEFT  +   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMASGYDRYFQIARCFRDEDLRADRQPEFTQADMELSFVDIDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +++   +           +N +     + +   EA  R+   D   T    + 
Sbjct: 255 VIEVNERLLKHLFKEV---------INVDVEIPFKRMPWQEAMDRF-GSDKPDTRFGMEL 304

Query: 192 PD 193
            D
Sbjct: 305 CD 306



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 47/148 (31%), Gaps = 5/148 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G+   +   +  +    L+E  +              P  E              K +
Sbjct: 423 ELGLIDENKYNFLWVTEFPLLEWSDEENRFMAMHHPFTMPMEEDWDKIDSDPGAVRAKAY 482

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     EL      +     Q   FE     K++     +      L      +P  +G
Sbjct: 483 DIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKER----AHEQFGFLLDAFSYGVPPHAG 538

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +A G DR+ M +   +NI EVI  P  +
Sbjct: 539 LAFGVDRICMHMLHTDNIKEVIAFPKVK 566


>gi|269138786|ref|YP_003295487.1| aspartyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984447|gb|ACY84276.1| aspartyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304558778|gb|ADM41442.1| Aspartyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 591

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I + +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMAERLKTRAKITAFVRRFMDGHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMSAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    + R                      +   +T AEA  R+   D     +  + 
Sbjct: 244 VREIMEALARALWMEIKGVDLG----------DFPVMTFAEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   L             +D    + 
Sbjct: 293 VDVADLVKNVDFKVFSGPANDAKGRVI 319



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            +++  +  W+ ++        E    G+         P   S  A            ++
Sbjct: 416 DLQLTDESRWAPLWVVDFPMFEEDGEGGLAAMHHPFTSPRDISPEALKANPVGAIANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           +     E+      +     Q   F+     E ++++K            L  L    P 
Sbjct: 476 MVMNGYEVGGGSVRIHSGAMQSAVFDILGINEQEQREKFG--------FLLDALKFGTPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRLVML+TG  NI +VI  P
Sbjct: 528 HAGLAFGLDRLVMLLTGTENIRDVIAFP 555


>gi|255020118|ref|ZP_05292188.1| Aspartyl-tRNA(Asn) synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254970411|gb|EET27903.1| Aspartyl-tRNA(Asn) synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 596

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 72/206 (34%), Gaps = 22/206 (10%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     L  R+ +   LR Y  E  F+++++  L   +P     ++    T+      
Sbjct: 131 RRPEMAGRLRLRHQVNRYLRRYLDERGFVDVETPILTRSTPEGARDYLVPSRTQPGHFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +     +R+ +     QPEFT ++   +      
Sbjct: 191 LPQ------SPQIFKQLLMVGGLERYYQITRCFRDEDLRADRQPEFTQVDIEASFVDEAA 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +IR                + +       +  AEA  RY  +D     +  + 
Sbjct: 245 VMAIAEPMIRGLFRELL---------DVDLGDPFPRMPYAEAIRRY-GVDRPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            +   L    +    R A +     +
Sbjct: 295 TELTDLARTVEFKVFRAAAELPQGRV 320



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 45/150 (30%), Gaps = 11/150 (7%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A +  +       W   F     +  E              P   S        +    
Sbjct: 416 AADRGLLEGGWRAVWITDFPMFEYDDQEDRWVSTHHPFTA--PQEGSLGLLQSHPEKALA 473

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEM 316
           + ++L     E+      +     Q   F           +     D+    L  L    
Sbjct: 474 RAYDLVLNGNEIGGGSIRIHRREVQEQVF------AALGIDPEEARDKFGFLLDALSYGA 527

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DRLVML++GA+ I +VI  P
Sbjct: 528 PPHGGLAFGLDRLVMLMSGADTIRDVIAFP 557


>gi|217033562|ref|ZP_03438991.1| hypothetical protein HP9810_905g81 [Helicobacter pylori 98-10]
 gi|216944087|gb|EEC23518.1| hypothetical protein HP9810_905g81 [Helicobacter pylori 98-10]
          Length = 462

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 280 DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAVHHPFTMPKNIE 339

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 340 CEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINI----NEEEAQKKFGFLL 395

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 396 EALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFP 432



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 67/219 (30%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 2   NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDY 61

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 62  LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 115

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S   +M    ++++   +              +     + +   EA   Y 
Sbjct: 116 QIDAEMSFCSENDVMGVVEDLLQEIFKAIGH----------HISKPFKRMPYKEAMENYG 165

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 166 SDKPDLRFELPLIEVGECFMDSSNAIFSNIAQDPKNKRI 204


>gi|15828803|ref|NP_326163.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) (AspRS)
           [Mycoplasma pulmonis UAB CTIP]
 gi|14089746|emb|CAC13505.1| ASPARTYL-TRNA SYNTHETASE (ASPARTATE--TRNA LIGASE) (ASPRS)
           [Mycoplasma pulmonis]
          Length = 578

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 88/240 (36%), Gaps = 21/240 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
           ++ R+   ++LR + +EN F+EI++  L   +P      R F      ++       L  
Sbjct: 143 IIFRSKFINALRTFLIENDFVEIETPILSKSTPEGA---RDFLVPTRNKNKF---FSLPQ 196

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SP+   + L+A+G E+ F  A A+R+ +     QPEF+ L+   + +  + L      ++
Sbjct: 197 SPQLYKQLLMASGFERYFQIARAFRDEDSRKDRQPEFSQLDMEISFQDEKVLHSITEKML 256

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
             A           + +N    +  E ++       Y   D           D    + +
Sbjct: 257 VYAF----------EKMNIKIEAPFERLSFDYVMQNY-GSDKPDLRYEVKIQDLKKYFEK 305

Query: 201 AQQAGI---RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
           +    I   +        +I ++   + +E     N   IL      +  ++    A+  
Sbjct: 306 SSFEIISSKKFIKGLFIKEIITKNDFKTLEEIAKKNGANILFYSSVEQGKISRTNFANKD 365



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 11/141 (7%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD----PRFTKRFELYACNIELCN 273
           F+ I+   +              +P      + +            K ++L     EL +
Sbjct: 419 FAWIIDWPLFEYDENTNTYSPSHHPFTMYDESTLVDGKISYEKTKAKSYDLVLNGYELVS 478

Query: 274 ACDELLDPIEQRHRFEKEMQ-EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVM 331
               +     Q   F+     +K+            FL      +P   G+A G +RL+M
Sbjct: 479 GSVRIYKKEIQAQIFKLLNLSQKEIEDKFG-----FFLKAFDYGLPPHCGLAFGIERLIM 533

Query: 332 LVTGANNINEVIWTPFSQSNQ 352
           ++T + +I EVI  P + S Q
Sbjct: 534 IMTQSESIREVIAFPKTSSGQ 554


>gi|20807683|ref|NP_622854.1| aspartyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|24212404|sp|Q8RAI7|SYD_THETN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|20516231|gb|AAM24458.1| Aspartyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 592

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +  ++RE+  +N FIEI++  L   +P     ++            
Sbjct: 141 RRPSMQRNLITRFKLTQAVREFLNDNGFIEIETPMLIKSTPEGARDYLVPSRIYPGKFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A   R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQIFKQLLMIAGFDRYYQIARCLRDEDLRADRQPEFTQIDIEMSFVEVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I+   +            + +       +T  EA  R+   D        + 
Sbjct: 255 VLDINERMIKHVFKKVL---------DVDLDIPFRRLTYQEAMERF-GTDKPDLRFGMEL 304

Query: 192 PD 193
            D
Sbjct: 305 KD 306



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++  +       +  +    L+E  E              P  E         
Sbjct: 414 HLRVEMAKRFNLIDESKYEFVWVVDFPLLEYDEEEKRYVAKHHPFTSPKDEDIDLLEKEP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K +++     E+      + D   Q+  F      E+E  +K     E +     
Sbjct: 474 LKVRAKAYDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEEAWKKFGFLMEAFK---- 529

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                   P   GIA G DRL M++TG++ I +VI  P +Q+
Sbjct: 530 -----YGAPPHGGIAYGLDRLAMIMTGSDTIRDVIAFPKTQN 566


>gi|332296202|ref|YP_004438125.1| aspartyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332179305|gb|AEE14994.1| aspartyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 590

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 78/230 (33%), Gaps = 20/230 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               ++  ++KR++I +++R +F+EN F+EI++  L   +P      R F     +Q   
Sbjct: 135 RRTDKKENIIKRHLITNTIRNHFLENDFLEIETPYLTKSTPEG---ARDFLVPSRLQ--- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +      
Sbjct: 189 PGTFYALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQPEFTQVDVEMSFVEPND 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--NIDLGTTLDNP 189
           +M     + +                        + I+  EA  +Y     DL   L+  
Sbjct: 249 VMTITEELFKKLNVQFG----------IECDYPIKRISYTEAMNKYGTDRPDLRNPLEIL 298

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           D  +            +          I          P L        D
Sbjct: 299 DFTEILKDTKLKIFRSVIEKDGYIKGFILKNKECHPTRPTLEKINNMAKD 348



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 50/149 (33%), Gaps = 5/149 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +  +    +  +  +    L E  E    +N        P PE             +  +
Sbjct: 415 EFNLVNESEFKYLWVVDFPLFEYDEKEKRLNSVHHPFTAPHPEDLEKLDTDPLSVRSLAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
           ++     EL      + +   Q   F    +       E        L  L    P   G
Sbjct: 475 DIVLNGNELGGGSIRINNTNLQSKIF----KLLDISPEEAQIKFGFLLEALEYGAPPHGG 530

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           IA+G DR+ ML TGA ++ +VI  P +QS
Sbjct: 531 IALGLDRITMLFTGAKSLRDVIAFPKTQS 559


>gi|329667229|gb|AEB93177.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 617

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 21/177 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R+ I  ++ EYF E  FI+I++  L + SP     ++            
Sbjct: 136 RRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMETSFLDEQG 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +      ++         K      +N +  +  + IT  EA  +Y +    T  + 
Sbjct: 250 VQDYTEGLL---------KKIMKDVMNIDLKTPIKRITWDEAMNKYGSDKPDTRYEM 297



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 50/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A + GI       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+     KK  Y E +      +  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKSAY-EQFGY---LMDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DRL M++ G +NI +V   P
Sbjct: 526 MGFPPHAGLAIGLDRLAMMLAGKDNIRDVTAFP 558


>gi|225849655|ref|YP_002729889.1| aspartyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|254781744|sp|C0QT74|SYD_PERMH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225645298|gb|ACO03484.1| aspartyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 605

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 77/213 (36%), Gaps = 31/213 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
           + +   R R            L+ R+ +  + REY   + F+E+++  L   +P      
Sbjct: 129 HEEVRLRYRFLDIRRPEMMKKLILRHEVYQATREYLAGHGFLEVETPMLTKSTPEG---A 185

Query: 60  RAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           R F     ++   +   Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT
Sbjct: 186 RDFLVPARLE---KGKFYALPQSPQLFKQILMVSGIDRYFQIVKCFRDEDLRKDRQPEFT 242

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +++  +    E ++     +I    +                    + ++  EA  RY 
Sbjct: 243 QIDFEMSFVDEEDVITVSEGLIHYIFKKVLG---------IELKLPFKRMSYTEAIERY- 292

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
             D      + +  D   +   A+    +V  D
Sbjct: 293 GTDKPDLRYSLELKD---ITDIAKDVQFKVFKD 322



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 74/216 (34%), Gaps = 14/216 (6%)

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL- 199
           +  A +   +  S Q+     F+E +   + E         L    D+ +   R L +L 
Sbjct: 359 KGMAWIKINEDGSLQSPIVKFFTEEQINKIKEIMEGENGDLLIFIADSYEITHRVLGFLR 418

Query: 200 --QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE------SALANI 251
              A++  +   +   +  +    L+E  E    +         P  E       A+ + 
Sbjct: 419 KHLAEKLKLIPENVWEFVWVVDFPLVEWDEEEGRLVALHHPFTSPKEEDIDRLDEAIQDK 478

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
             A    ++ ++L     E+      +     Q+  FE           E        + 
Sbjct: 479 KVALSFRSRAYDLVLNGEEIGGGSIRIHSSHIQKKVFE----LLGISDEEAEEKFGFLIN 534

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DR+V L+TG+ +I +VI  P
Sbjct: 535 ALKYGAPPHGGLAFGLDRIVALMTGSESIRDVIAFP 570


>gi|145299764|ref|YP_001142605.1| aspartyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166225315|sp|A4SPN5|SYD_AERS4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|142852536|gb|ABO90857.1| aspartyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 588

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 75/208 (36%), Gaps = 20/208 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                  +L  R    + +R +  E+ F++I++  L   +P     ++            
Sbjct: 130 RRPEMAKYLKTRAKASAFVRRFMDEHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +    +IR            +Q+V      +   +T  EA  R+ +   DL   ++  
Sbjct: 244 VRELMEEMIRNL----------WQHVLAVDLGDFPVMTFDEAMRRFGSDKPDLRLPMELV 293

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D  D       A  AG         + +
Sbjct: 294 DVADLLTAVEFAVFAGPANDPKGRVAAL 321



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 48/151 (31%), Gaps = 15/151 (9%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEP--NLGINCCTILDRYPAPESALANIYPADPRFTK 260
           + G  +   +        I     E     G+         P+              +  
Sbjct: 412 KVGRDLGLMENSWKPLWVIDFPMFEEDSEGGLAAMHHPFTAPSNLGPSELKANPLSAYAN 471

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q   F+       +++ K            L  L   
Sbjct: 472 AYDMVINGYEVGGGSVRIHNSEMQATVFDILGITPAEQRLKFG--------FLLDALKYG 523

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 524 TPPHAGLAFGLDRLSMLLTGTDNIRDVIAFP 554


>gi|229844589|ref|ZP_04464729.1| aspartyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229812838|gb|EEP48527.1| aspartyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 588

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGLWLDTIGVDLG----------KFPVMTWQEAMRRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +         +   +D    +
Sbjct: 294 VDVEDIVKDVDFKVFQAPANDPNGRV 319



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ +              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFERDDEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|148652798|ref|YP_001279891.1| aspartyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|254781745|sp|A5WE50|SYD_PSYWF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148571882|gb|ABQ93941.1| aspartyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 601

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  ++ R    S++R Y  +  F+++++  L   +P     ++    T       
Sbjct: 134 RRPEMQERMVFRAKATSTIRRYLDDQGFLDVETPILTRATPEGARDYLVPSRTRPGNFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E 
Sbjct: 194 LPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLSEED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I+   +                  +   +T AEA   YA+ D          
Sbjct: 248 IMDINEGLIQNLFKTMLDVDLG----------KFPRMTYAEAMRDYAS-DKPDLRIPLKL 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 297 IDVADLMQSVDFKVFAGPANDPKGRV 322



 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G+ +  +         +     E     +       +P      S        +   +
Sbjct: 422 KIGLDMNMETCEWAPLWVVDFPMFEET--DDGKWTSMHHPFTMPKGSVEELKNSPETALS 479

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
             +++     E+      +     QR  F+           E        L  L    P 
Sbjct: 480 IAYDMVLNGTEIGGGSLRINTVEMQRAVFDALGIS----EEEANEKFSFLLDALKFGAPP 535

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             G+A G DRL+ML+ GA++I +VI  P +++
Sbjct: 536 HGGLAFGLDRLIMLMVGASSIRDVIAFPKTKT 567


>gi|332975401|gb|EGK12295.1| aspartate--tRNA ligase [Desmospora sp. 8437]
          Length = 594

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 61/188 (32%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  LL R+     +R +  E+ FIE+++  L   SP     ++            
Sbjct: 137 RRPVMQETLLLRHRAMQMVRRFLDEHGFIEVETPMLTKSSPEGARDYLVPSRVHEGEFYA 196

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ F     +R+ +     QPEFT ++   +    ++
Sbjct: 197 LPQ------SPQIFKQLLMVSGMERYFQIVRCFRDEDLRADRQPEFTQIDIEASFLETDE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           LM     ++                           I   EA  R+   D        + 
Sbjct: 251 LMAMMEEMVARLFRETIGVEVE---------RPFRRIPYREAMERF-GSDRPDLRFGMEL 300

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 301 VDLSEMVK 308



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 49/157 (31%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +  A    ++ +    L+   E              P  E         
Sbjct: 410 ELRIRLARELDLIPAGVYKFAWVTHFPLLSYDEEEGRYYAEHHPFTSPVDEDIPLLKSDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                K +++     E+      +     Q   FE       + K++            L
Sbjct: 470 SQVRAKAYDMVLNGYEVGGGSRRIHRREIQEMMFEALGFTMEEAKEQFG--------YLL 521

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   GIA GFDRLVML+ G +N+ + I  P
Sbjct: 522 EAFEYGAPPHGGIAFGFDRLVMLLAGRSNLRDTIAFP 558


>gi|328945671|gb|EGG39822.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 578

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 59/180 (32%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            +  AR+   D    L    +  R    L   +  +  A D     +   +      +  
Sbjct: 374 QDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLIDPSLLHFLWVVDWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +    +    D   +  +++     E+      + D   Q   F
Sbjct: 434 RNEDQNRYQAMHHPFTQGIFEDRQEPDQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEAMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        +  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 494 E-----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 548



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 89/278 (32%), Gaps = 27/278 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY  +  F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNDLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKAVVKKTHSLELT---------EAFPTISYEEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
               L        I+ A D+       +++   +           L  Y           
Sbjct: 296 TLTDLCQSNDSLLIKKALDN-----QEKVMGICVPDAASAFSKKQLSHYYQEMKEFGC-S 349

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +  +L            E  D      RFE 
Sbjct: 350 RFANLKVENGQLV--GDLASTFEAESQD---LLARFEA 382


>gi|77360870|ref|YP_340445.1| aspartate tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|97196809|sp|Q3IIN7|SYD_PSEHT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|76875781|emb|CAI87002.1| aspartate tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 592

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 52/136 (38%), Gaps = 8/136 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  EN F++I++  L   +P     ++            
Sbjct: 130 RRLEMSDRIKLRAKASSFVRRFLDENGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSDQ 243

Query: 132 LMKDCMNIIRCAAEVA 147
           +      +IR   +  
Sbjct: 244 VRGMTEKMIREMWQTL 259



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 10/147 (6%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + + + D+W+ ++        E + G ++        P   SA           +  +
Sbjct: 415 IDLEITNLDSWAPLWVVDFPMFEEDDEGTLHAVHHPFTAPKDMSASELEANPAAAISDAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQS 319
           ++     E+      + +   Q   F      +    NE    D+    L  L    P  
Sbjct: 475 DMVLNGYEVGGGSVRIHNADMQEAAF------RILGINEQEQQDKFGFLLDALKYGTPPH 528

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
           +G+A G DRL ML+ G +NI +VI  P
Sbjct: 529 AGLAFGLDRLAMLLCGTDNIRDVIAFP 555


>gi|260772664|ref|ZP_05881580.1| aspartyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611803|gb|EEX37006.1| aspartyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 591

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDGHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      E   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEQMIREMWLELLDVDLG----------EFPVMPYSEAIRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDEKGRV 318



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 13/117 (11%)

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----K 290
                  P   +A           +  +++     E+      + D   Q   F+     
Sbjct: 447 MHHPFTAPLNMTAEELKASPSNALSNAYDMVLNGYEVGGGSVRIHDATMQSAVFDLLGID 506

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E +++ K            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 507 EHEQRLKFG--------FLLDALKYGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|331220633|ref|XP_003322992.1| asparaginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309301982|gb|EFP78573.1| asparaginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 576

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 97/349 (27%), Gaps = 42/349 (12%)

Query: 12  RDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIR 60
            D    RR            L  R+ +  + R+ + +   +E+    +  +     + + 
Sbjct: 250 PDTLADRRHLVIRGETASSVLKVRSALLDAFRKSYAKISMVEVTPPCMVQTQVEGGSTLF 309

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F        +  +  YL  S +   +  L +     FC   ++R  +     H  E+T 
Sbjct: 310 EF-------GYYGEKAYLTQSSQLYLETCLPS-LGDCFCIQESFRAEKSKTRRHLSEYTH 361

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           LE   A  ++E L+     +I     +  +       V     S    I   +       
Sbjct: 362 LEGELAFLTFEDLLAHIEELICSTLSILLEDPKIKGLVESLNPSFQMPIRPFKRMEYREA 421

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           ID           +                   T++D         +   LG+     L 
Sbjct: 422 IDWLNGRGIEKSME-------------DGGGAFTYADDIPEAPERLMTDTLGV--PIFLI 466

Query: 240 RYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
            +P    +      P +  FT+  ++    +         +         E+ +   K  
Sbjct: 467 NFPKEIKAFYMKRIPGNENFTESVDVLMPGVGEIVGGSMRMTGY------EELLAAYKGA 520

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                P             +  G  +G +R +  + G  ++ E    P 
Sbjct: 521 GIPADPYYWYTDQRKYGTCEHGGYGLGVERFLAWLLGRPHVRECSLYPR 569


>gi|292493817|ref|YP_003529256.1| aspartyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291582412|gb|ADE16869.1| aspartyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 595

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 48/144 (33%), Gaps = 5/144 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           V H      +    + E  E +   N        P  E             ++ ++L   
Sbjct: 424 VEHGWRPLWVIDFPMFEWDESSNRWNALHHPFTSPKEEDLPLLEQNPGACRSRAYDLVLN 483

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +     Q   F    +       E        L  L    P   GIA G 
Sbjct: 484 GTEVGGGSMRIFRSPVQSQVF----RLLGIGDEEAKEKFGFLLDALKYGCPPHGGIAFGL 539

Query: 327 DRLVMLVTGANNINEVIWTPFSQS 350
           DRLVML+TG+ +I EVI  P +Q+
Sbjct: 540 DRLVMLMTGSASIREVIAFPKTQT 563



 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 25/177 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            L  R+ I   LR++  E  F++ID+  L   +P      R 
Sbjct: 122 EIRLRYRYIDLRRPESLQRLRFRSEIIRQLRKFLDERGFLDIDTPVLTKSTPEG---ARD 178

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F           +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT L+
Sbjct: 179 FLVPSRTH--PGQFFALPQSPQLFKQLLMIAGVDRYYQMVRCFRDEDLRADRQPEFTQLD 236

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
              +    ++ M     +I+                     +    +  AEA A + 
Sbjct: 237 IETSFLHEDEFMGLMEEMIKELFATVLGVPL---------HTPFIRMPYAEALACFG 284


>gi|301093825|ref|XP_002997757.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262109843|gb|EEY67895.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 653

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 83/221 (37%), Gaps = 27/221 (12%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHI 59
           N D   R R            L+ R+ I  + R +     F+EI++ +L + +P      
Sbjct: 143 NEDTRLRHRYLDLRRSALQQNLVVRSKISLAARNFLSSEGFLEIETPTLFKSTPEG---A 199

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F           +   L  SP+   + L+  G +K F  A  +R+       QPEFT 
Sbjct: 200 REFLVPTRTT---GQFYALTQSPQQYKQLLMVGGLDKYFQLARCYRDEGGRADRQPEFTQ 256

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++   +  + E +M     +++   + A+++          P      +   EA  R+  
Sbjct: 257 IDLEMSFVTREDVMHLMERLVKEIWKAASKE---------LPDRPFVRMPFDEAMHRF-G 306

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
           +D   T    +  D   L  + + A  + A  +  + I S+
Sbjct: 307 VDKPDTRYGIELKDVDDLLQECEFAPFKTALLNKNTKIHSK 347



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 13/93 (13%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE----KKKIYNETYPIDEDFLACLT 314
            + +++     EL      +     Q+  FE  ++     ++          E  L  L+
Sbjct: 538 AQHYDIVCNGWELGGGSIRIHQAKLQQAVFEDVLELPTLQRQSF--------EHLLQALS 589

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLV ++ GA ++ +VI  P
Sbjct: 590 HGAPPHGGIALGLDRLVAILCGAPSLRDVIAFP 622


>gi|301062998|ref|ZP_07203563.1| aspartate--tRNA ligase [delta proteobacterium NaphS2]
 gi|300442879|gb|EFK07079.1| aspartate--tRNA ligase [delta proteobacterium NaphS2]
          Length = 606

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 74/200 (37%), Gaps = 25/200 (12%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP       KR+ I S +R Y  E  FIE+++  L   +P     ++        +   
Sbjct: 149 RRPQIFNNFKKRHAIASRIRTYLNERGFIEVETPFLTKSTPEGARDYLVPSRVNTGMFYA 208

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   A    + 
Sbjct: 209 LPQ------SPQLFKQLLMMSGFDRYYQVVRCFRDEDLRADRQPEFTQVDLEMAFVDEKD 262

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++                ++    S   ++T  EA  R+   D      + + 
Sbjct: 263 VMDIFEGMMGELFTTI---------MDIELSSPIPHLTYQEAMDRF-GTDRPDLRFDMEL 312

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   +   A+ +  +V   
Sbjct: 313 KN---ISDIAENSDFKVFKG 329



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 49/156 (31%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A +  +      ++  I    L+E  + +            P  +         
Sbjct: 423 ALRLEMAHREELINKDRFSFVWITDFPLLEYDDESDRFVAVHHPFTAPVAQDIGFLKENP 482

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                + ++L     E+      + D   Q   F         +          F   + 
Sbjct: 483 GKVRARAYDLVLNGSEIGGGSIRIHDAKTQEMVF-------DALGIPAREARSKFGFLID 535

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A+GFDRLV ++TG  +I E+I  P
Sbjct: 536 ALKHGAPPHGGMALGFDRLVAIMTGVRSIREIIAFP 571


>gi|225159378|ref|ZP_03725674.1| aspartyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224802039|gb|EEG20315.1| aspartyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 599

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 93/306 (30%), Gaps = 16/306 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + R  L  R+    ++R+YF   +FIE+++ +L + +P     ++            
Sbjct: 138 RRPKMRKNLQVRHRATKAIRDYFDAQEFIEVETPALFKSTPEGAREYLVPSRIHPGEFYA 197

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ F  A  +R+ +     Q EFT ++   +  + E 
Sbjct: 198 LSQ------SPQQFKQILMVAGVERYFQIARCFRDEDLRADRQMEFTQVDVEASFITRED 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                        V +   R+  ++L         
Sbjct: 252 VYALFEGMLKKVWKDILNVDIPAPIQRMPFHEAMNRFGVDKPDLRF-GLELTDLTKTFKT 310

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               +        G+  A +       ++  ++ +E          L           + 
Sbjct: 311 SAFKVFQATVAGGGVIKAINAKGLADLTQGELKNLEDIAKSLGAKGLAFIKVEGGEWKSP 370

Query: 252 YPADPRFTKRFELY-------ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                   ++  L           I    A  E    I  R R E      K+      P
Sbjct: 371 IVKFFSDAEKAALTQQLGIAEGDMIFFAAAPWEKACAILGRIRLEAAQLLVKRGKLTIDP 430

Query: 305 IDEDFL 310
            D  FL
Sbjct: 431 NDWKFL 436



 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 57/177 (32%), Gaps = 11/177 (6%)

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGINCCTILDR 240
                    +       L  ++  + +  +D     +    L+   E   G         
Sbjct: 402 WEKACAILGRIRLEAAQLLVKRGKLTIDPNDWKFLWVVDFPLMSYDEERGGYAATHHPFT 461

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
            P PE              + ++L    +EL      +  P  Q+  FE  ++       
Sbjct: 462 APVPEDIHLLDSDPKAVRGQHYDLVLNGMELGGGSIRIHQPALQKKVFEDVLKI------ 515

Query: 301 ETYPIDEDF---LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               ++  F   L       P   GIA G DR+V L+ G  +I +VI  P +Q  Q+
Sbjct: 516 PQDVVESRFGYMLKAFTYGAPPHGGIAFGLDRMVALLCGTTSIRDVIAFPKTQKGQD 572


>gi|56421107|ref|YP_148425.1| aspartyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|62287517|sp|Q5KWS9|SYD_GEOKA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56380949|dbj|BAD76857.1| aspartyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 590

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 27/201 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R            L  R+ I  ++R++    +F+EI++  L   +P     ++ 
Sbjct: 123 DVRLKYRYLDLRRPVMFQTLALRHKITKTVRDFLDSERFLEIETPMLTKSTPEGARDYLV 182

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 183 PSRVHPGEFYALPQ------SPQIFKQLLMVGGVERYYQIARCFRDEDLRADRQPEFTQI 236

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + +M     ++    + A                    IT  EA +RY + 
Sbjct: 237 DIEMSFIEQKDIMDLTERMMAAVVKAAKGIDIP---------RPFPRITYDEAMSRYGSD 287

Query: 181 DLGTTLDNPDQPDRHLLYLQA 201
                          ++   A
Sbjct: 288 KPDIRFGLELVDVSEIVRNSA 308



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 51/175 (29%), Gaps = 17/175 (9%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL   + +        L     + G  +   D     F  +    +              
Sbjct: 390 DLLLFVADEKAIVAAALGALRLKLGKELGLIDEAKLAFLWVTDWPLLEYDEEEGRYYAAH 449

Query: 241 YPAPESALANI----YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EM 292
           +P       +I            + ++L     EL      + +   Q   F      E 
Sbjct: 450 HPFTMPVRDDIPLLETNPSAVRAQAYDLVLNGYELGGGSLRIFERDVQEKMFRALGFSEE 509

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + +++            L       P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 510 EARRQFG--------FLLEAFEYGTPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 556


>gi|332533784|ref|ZP_08409640.1| aspartyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036715|gb|EGI73178.1| aspartyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 592

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 52/136 (38%), Gaps = 8/136 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  EN F++I++  L   +P     ++            
Sbjct: 130 RRLEMSDRIKLRAKASSFVRRFLDENGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSDQ 243

Query: 132 LMKDCMNIIRCAAEVA 147
           +      +IR   +  
Sbjct: 244 VRGMTEKMIREMWQTL 259



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 54/146 (36%), Gaps = 10/146 (6%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + + + D+W+ ++        E + G ++        P   +A           +  ++
Sbjct: 416 DLEITNLDSWAPLWVVDFPMFEEDDEGTLHAVHHPFTAPKDITASELEANPAAAISDAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQSS 320
           +     E+      + +   Q   F      +    NE    D+    L  L    P  +
Sbjct: 476 MVLNGYEVGGGSVRIHNADMQETAF------RILGINEQEQQDKFGFLLDALKYGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DRL ML+ G +NI +VI  P
Sbjct: 530 GLAFGLDRLAMLLCGTDNIRDVIAFP 555


>gi|312128270|ref|YP_003993144.1| aspartyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778289|gb|ADQ07775.1| aspartyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 594

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +   +R +  +N FIEI++  L   +P     ++            
Sbjct: 140 RRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLVPSRIFPGKFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 200 LPQ------SPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQPEFTQIDIEMSFVDVDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +++                        E     +   R+  ++L    D    
Sbjct: 254 VIEINEKLLKTIFGEMLGIDLKLPLPRLTYKEAMERFGSDKPDTRF-GMELVDITDIVKN 312

Query: 192 PDRHLLYLQAQQAG 205
            +  +    A + G
Sbjct: 313 CEFKVFSDAANKGG 326



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 49/158 (31%), Gaps = 9/158 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A++  +          +    L E  E              P  E         
Sbjct: 414 NLRLEIARKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDLEYLETDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
               +K +++     E+      +  P  Q+  F      K   + E    D     L  
Sbjct: 474 AKVRSKAYDIVLNGTEIGGGSIRIHSPEIQKRMF------KALGFTEEKAQDRFGFLLEA 527

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                P   GIA GFDRL ML+ G ++I + I  P  +
Sbjct: 528 FKYGTPPHGGIAYGFDRLCMLLLGLDSIRDTIAFPKVK 565


>gi|227890123|ref|ZP_04007928.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849298|gb|EEJ59384.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 617

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 21/177 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R+ I  ++ EYF E  FI+I++  L + SP     ++            
Sbjct: 136 RRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMETSFLDEQG 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +      ++         K      +N +  +  + IT  EA  +Y +    T  + 
Sbjct: 250 VQDYTEGLL---------KKIMKDVMNIDLKTPIKRITWDEAMNKYGSDKPDTRYEM 297



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A + GI       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+     KK+ Y E +      +  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAY-EQFGY---LMDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DRL M++ G +NI +V   P
Sbjct: 526 MGFPPHAGLAIGLDRLAMMLAGKDNIRDVTAFP 558


>gi|268319358|ref|YP_003293014.1| hypothetical protein FI9785_875 [Lactobacillus johnsonii FI9785]
 gi|262397733|emb|CAX66747.1| aspS [Lactobacillus johnsonii FI9785]
          Length = 617

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 21/177 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R+ I  ++ EYF E  FI+I++  L + SP     ++            
Sbjct: 136 RRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMETSFLDEQG 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +      ++         K      +N +  +  + IT  EA  +Y +    T  + 
Sbjct: 250 VQDYTEGLL---------KKIMKDVMNIDLKTPIKRITWDEAMNKYGSDKPDTRYEM 297



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A + GI       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+     KK+ Y E +      +  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAY-EQFGY---LMDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DRL M++ G +NI +V   P
Sbjct: 526 MGFPPHAGLAIGLDRLAMMLAGKDNIRDVTAFP 558


>gi|261868509|ref|YP_003256431.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413841|gb|ACX83212.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 592

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 69/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I   +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQHLKTRAKITGFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++             +Q+       +   IT  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGL----------WQHTLGVDLGKFPVITWQEAMRRF-GSDKPDLRNPLEL 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +         +   +D    +
Sbjct: 294 VDVADIVKNVDFKIFQGPANDPNGRV 319



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 57/189 (30%), Gaps = 21/189 (11%)

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            E +        +   D   T  +     R       +  G+    +     +    + E
Sbjct: 382 FERVGAQTGDILFFGADKWQTATDSMGALR---LKLGRDLGLTRLDEWQPLWVIDFPMFE 438

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           + +              P   +               +++     E+      + DP  Q
Sbjct: 439 RDDEGCLAAMHHPFTS-PKDFTPEQLEADPTSAVANAYDMVINGYEVGGGSVRIFDPKMQ 497

Query: 285 RHRF------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
           +  F      E++ +EK              L  L    P  +G+A G DRL ML+TG  
Sbjct: 498 QTVFRILGIDEEQQREKFG----------FLLDALKFGTPPHAGLAFGLDRLTMLLTGTE 547

Query: 338 NINEVIWTP 346
           NI +VI  P
Sbjct: 548 NIRDVIAFP 556


>gi|237809454|ref|YP_002893894.1| aspartyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511872|sp|C4LBN4|SYD_TOLAT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|237501715|gb|ACQ94308.1| aspartyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 588

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 77/208 (37%), Gaps = 20/208 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R Y  E+ F++I++  L   +P     ++            
Sbjct: 130 RRPEMAASLKTRARITSFVRRYMDEHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLNAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +   N+IR            +QN+      +   +T  EA  RY +   DL   ++  
Sbjct: 244 VRELMENLIRGL----------WQNIIGVDLGQFPIMTFDEAMRRYGSDKPDLRNPMEMV 293

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D  D       A  AG         + +
Sbjct: 294 DIADLLKDVSFAVFAGPANDPKGRVAAL 321



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 15/142 (10%)

Query: 212 DTWSDIFSRILIEKIEP--NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
           +        +     E     G+         P   +           +   +++     
Sbjct: 421 ENCWKPLWVVDFPMFEEDGEGGVTAMHHPFTAPKDFTPAQLEADPLAAYANAYDMVINGY 480

Query: 270 ELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
           E+      +     Q+  F      E ++K+K            L  L    P  +G+A 
Sbjct: 481 EVGGGSVRIHRGDMQQTVFRAIGISEAEQKEKFG--------FLLDALKFGTPPHAGLAF 532

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           G DRL ML+TG +NI +VI  P
Sbjct: 533 GLDRLTMLLTGTDNIRDVIAFP 554


>gi|149911273|ref|ZP_01899895.1| Putative aspartyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805658|gb|EDM65658.1| Putative aspartyl-tRNA synthetase [Moritella sp. PE36]
          Length = 592

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 18/201 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  + S +R +  ++ F++I++  L   +P     ++    T       
Sbjct: 130 RRPEMSNRLKTRAKVSSFVRRFMDDHGFLDIETPVLTKATPEGARDYLVPSRTHK----- 184

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S  Q
Sbjct: 185 -GQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSAAQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +   +++    +                      +T AEA  R+ +            
Sbjct: 244 VREVTESLVTNMWKEILD----------VELPAFPSMTYAEAMRRFGSDKPDLRNPLELV 293

Query: 192 PDRHLLYLQAQQAGIRVAHDD 212
               LL     +     A++ 
Sbjct: 294 DVADLLKDVEFKVFAEPANNP 314



 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 7/169 (4%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D+     + ++     L     + G+ +            +     E +   N   +   
Sbjct: 390 DIIFFGADTNKVVTEALGALRLKVGVDLELTSNEWKPLWVVDFPMFEEDEEGNLHAVHHP 449

Query: 241 Y--PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           +  P   +A   +       +  +++     E+      +     Q+  FE    E    
Sbjct: 450 FTAPMDVNAAELLANPANAISDAYDMVINGYEVGGGSVRIHKGEMQKAVFEILGIE---- 505

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 506 DKEQQDKFGFLLEALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 554


>gi|42519261|ref|NP_965191.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41583549|gb|AAS09157.1| aspartyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 617

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 21/177 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R+ I  ++ EYF E  FI+I++  L + SP     ++            
Sbjct: 136 RRPTLQRAIILRSKILKAVHEYFDEQGFIDIETPILGKSSPEGARDYLVPSRIYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 196 LPQ------SPQLFKQLLMGAGFDKYYQLARCFRDEDLRGDRQPEFTQIDMETSFLDEQG 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +      ++         K      +N +  +  + IT  EA  +Y +    T  + 
Sbjct: 250 VQDYTEGLL---------KKIMKDVMNIDLKTPIKRITWDEAMNKYGSDKPDTRYEM 297



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A + GI       +  +    L E  E              P  E         
Sbjct: 410 HLRREFAHETGIIPEGVFDFVWVVDWPLFEYDEGLGRWIAAHHPFTMPDDEGIKLLDTDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+     KK+ Y E +      +  L 
Sbjct: 470 HKAHARSYDIVMNGDEMGGGSIRIHKRSIQEKMFKALGFTKKRAY-EQFGY---LMDALD 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A+G DRL M++ G +NI +V   P
Sbjct: 526 MGFPPHAGLAIGLDRLAMMLAGKDNIRDVTAFP 558


>gi|166366468|ref|YP_001658741.1| aspartyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189082104|sp|B0JNW9|SYD_MICAN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166088841|dbj|BAG03549.1| aspartyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 595

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 19/189 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +   +R +   E  FIE+++  L   +P     ++           
Sbjct: 136 RRERMSQNLQLRHQVVKEMRRFLEDEQHFIEVETPILTRSTPEGARDYLVPSRVNPGQWY 195

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S  
Sbjct: 196 ALPQ------SPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFLSLP 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++     +I    +            N +       +T AEA  RY  ID   T    +
Sbjct: 250 EILALNEALIAHIFKKV---------KNIDISLPLPRLTYAEAMDRY-GIDRPDTRFGLE 299

Query: 191 QPDRHLLYL 199
             +   ++ 
Sbjct: 300 LVNVAEIFA 308



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 35/108 (32%), Gaps = 5/108 (4%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P       ++          +++    IE+      +     Q   F           
Sbjct: 458 HHPFTAPNPEDLEDLAQARALAYDMIFNGIEIGGGSLRIYQREVQEKVF----ATIGLSP 513

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E Y      L       P   GIA G DRLVML+ G  +I +VI  P
Sbjct: 514 EEAYNKFGFLLEAFEYGTPPHGGIAYGLDRLVMLLAGEESIRDVIAFP 561


>gi|325696980|gb|EGD38867.1| aspartate--tRNA ligase [Streptococcus sanguinis SK160]
 gi|327458858|gb|EGF05206.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 578

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 59/180 (32%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            +  AR+   D    L    +  R    L   +  +  A D     +   +      +  
Sbjct: 374 QDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLIDPSLLHFLWVVDWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +    +    D   +  +++     E+      + D   Q   F
Sbjct: 434 WNEDQNRYQAMHHPFTQGIFEDRQEPDQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEAMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        +  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 494 E-----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 548



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 89/278 (32%), Gaps = 27/278 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY  +  F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNDLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKAVVKKTHSLELT---------EAFPTISYEEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
               L        I+ A D+       +++   +           L  Y           
Sbjct: 296 TLTDLCQSNDSLLIKKALDN-----QEKVMGICVPDAASAFSKKQLSHYYQEMKEFGC-S 349

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +  +L            E  D      RFE 
Sbjct: 350 RFANLKVENGQLV--GDLASTFEAESQD---LLARFEA 382


>gi|198282205|ref|YP_002218526.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666964|ref|YP_002424570.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|226735097|sp|B7J3F7|SYD_ACIF2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690898|sp|B5EJL3|SYD_ACIF5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|198246726|gb|ACH82319.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218519177|gb|ACK79763.1| aspartyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 596

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 67/206 (32%), Gaps = 18/206 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R+ +   +R Y     FI++++  L   +P     ++    T+      
Sbjct: 131 RRPEMLHRLRLRHQVTRFVRGYLDNAGFIDVETPVLTRSTPEGARDYLVPSRTQPGHFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    E 
Sbjct: 191 LPQ------SPQLFKQLLMVAGLDRYYQITKCFRDEDLRADRQPEFTQIDIEASFVDEEA 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +IR                          +T  +A  R+  +D     +  + 
Sbjct: 245 VMGTAEPMIRGLFAEVLGVQLP---------DPFPRMTYRDAMHRF-GVDRPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            +   L         R A +     +
Sbjct: 295 TELTDLMRAVDFKVFREAAERPHGRV 320



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 38/137 (27%), Gaps = 5/137 (3%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           +     I    + +  +              P  E              + ++L     E
Sbjct: 425 EWCPVWITDFPMFDYDDKEDRWTSTHHPFTAPQTEHLETLGQDPGNALARAYDLVLNGNE 484

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F            E        L  L    P   G+A G DRL
Sbjct: 485 IGGGSIRIHQEAVQEKVF----AALGIGAEEARDKFGFLLDALHYGAPPHGGLAFGLDRL 540

Query: 330 VMLVTGANNINEVIWTP 346
           VML+ GA  I +VI  P
Sbjct: 541 VMLLCGAETIRDVIAFP 557


>gi|182414291|ref|YP_001819357.1| aspartyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|238692909|sp|B1ZSW8|SYD_OPITP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|177841505|gb|ACB75757.1| aspartyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 595

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + R  L  R+    S+R+YF   +FIE+++ +L + +P     ++            
Sbjct: 136 RRPKMRKNLQVRHRAAKSIRDYFDAQEFIEVETPALFKSTPEGAREYLVPSRIHPGQFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F  A  +R+ +     Q EFT ++   +  + E 
Sbjct: 196 LSQ------SPQQFKQILMVAGVEKYFQIARCFRDEDLRADRQMEFTQVDVEASFVTRED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                 +    +   +A  RY  +D        + 
Sbjct: 250 IYALFEGMLKKVWKDVLDVDIP---------TPFPRMAFHDAMNRY-GVDKPDVRFALEL 299

Query: 192 PDRHLLYL 199
            D   L+ 
Sbjct: 300 ADFSELFK 307



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 10/149 (6%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
             D  +  +    L+   E              P P+              + +++    
Sbjct: 428 HDDWQFLWVIDFPLMTYDEAENRYVATHHPFTAPVPDDTQYLDSDPKKVRGQHYDVVLNG 487

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQSSGIAM 324
           +EL      +  P+ Q+  FE  ++           ++  F   L       P   GIA 
Sbjct: 488 MELGGGSIRIHQPVLQKKVFEDVLKI------PQDVVESRFGYMLKAFTYGAPPHGGIAF 541

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G DR+V L+ G  +I +VI  P +Q  Q+
Sbjct: 542 GLDRMVALLCGTTSIRDVIAFPKTQKGQD 570


>gi|33151787|ref|NP_873140.1| aspartyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|38372511|sp|Q7VNF0|SYD_HAEDU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33148008|gb|AAP95529.1| aspartyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 589

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
             ++    L  R  I S +R Y  E+ F++I++  L   +P     ++            
Sbjct: 131 RRHKMAENLKTRAKITSFVRRYMDEHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     N+I             + +       +   ++  EA   +   D     +  + 
Sbjct: 245 VRALMENMIHSL----------WLDRLNVDLGKFPIMSWQEAMQHF-GSDKPDLRNPLEL 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        +     +
Sbjct: 294 VDIADIVKNVEFNVFNEPANAIDGRV 319



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 41/119 (34%), Gaps = 17/119 (14%)

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------ 288
                  P   S               +++     E+      + DP  Q+  F      
Sbjct: 448 MHHPFTAPKDLSPDQLAADPIKAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFNILGIN 507

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E++ QEK              L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 508 EQDQQEKFG----------FLLDALKFGTPPHAGLAFGLDRLTMLITGTENIRDVIAFP 556


>gi|220932051|ref|YP_002508959.1| Aspartyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254781736|sp|B8CXE5|SYD_HALOH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219993361|gb|ACL69964.1| Aspartyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 590

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 63/182 (34%), Gaps = 19/182 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R +  L  R+ +  + R+Y  +N F E+++  L   +P     ++            
Sbjct: 141 RRPRMKKNLELRHRVMKTTRDYLDDNGFWEVETPILTRSTPEGARDYLVPSRIHPGHFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQLFKQLLMVGGVERYFQIARCFRDEDLRANRQPEFTQIDIEMSFIDKED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++    +           +     +   +   EA  R+   D        + 
Sbjct: 255 VFSLVNGLMKRLFALV----------DIEIPEKIPVMPYQEAIDRF-GSDKPDLRFGMEL 303

Query: 192 PD 193
            D
Sbjct: 304 KD 305



 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 53/153 (34%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A++ G+       +  +    L+E  E              P  E         
Sbjct: 413 NLRLKIAREEGLIPDGVYKFVWVVDFPLMEYDEDEGRYVAKHHPFTAPLDEDIPLLDSNP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +   +K ++      EL      + +   Q   F      ++K  ++        L    
Sbjct: 473 EKIRSKAYDFVLNGEELGGGSIRINNKDLQMKVFNALNISEEKASDK----FGFLLEAFN 528

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DRL+M+++G+ ++ +VI  P
Sbjct: 529 YGAPPHGGIAFGLDRLLMVLSGSESMRDVIAFP 561


>gi|46117424|ref|XP_384730.1| hypothetical protein FG04554.1 [Gibberella zeae PH-1]
          Length = 575

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 108/339 (31%), Gaps = 35/339 (10%)

Query: 14  FHYR---RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD 70
            H R   ++     R  ++   R Y     F E +   L  +  +E     F        
Sbjct: 244 MHKRTPVQQAIADIRIEVKRLFRNYLEPRHFKEFEPPCLIGAA-SEGGGNVFRLP----- 297

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +  +  +L  SP+F  +  +A G E++F     +R        H  EFT L+     +  
Sbjct: 298 YFGEEAFLAQSPQFYKQFEIAGGRERVFSSGPVFRAENSNTPRHMTEFTGLDLEMEIKDS 357

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              + D +  +  +           + ++    +E E +            + G  +   
Sbjct: 358 YLEVLDVLEGVLLSIL---------RGIHERCATEIETVRSVYGSEPLLLPEPGKEVRLT 408

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
               + LL  +       V  D+  S    + L E +      +   ++D++P       
Sbjct: 409 FADAQKLLREEGPAEFANVRDDEDMSTPQEKALGEVVRKKYNTD-FYVIDKFPETARPFY 467

Query: 250 NIYPA-------DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                         R T  F+++    E+ +    + +P E   R       + K  +  
Sbjct: 468 AKLDDAGTTIGDGVRVTNAFDMFIRGQEVLSGGQRVSNPDELEER------IRAKGIDPK 521

Query: 303 YPIDEDFLACLT--EMPQSSGIAMGFDRLVMLVTGANNI 339
               +++LA      +P   G   G DR+V       ++
Sbjct: 522 SDGIKEYLAVFRQVGVPAHGGGGFGLDRIVAWALALPSV 560


>gi|255320947|ref|ZP_05362121.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|255302116|gb|EET81359.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SK82]
          Length = 592

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 68/207 (32%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R Y  EN F+++++  L   +P     ++            
Sbjct: 134 RRPEMLDRLRFRSKVTNLIRNYLDENGFLDVETPILTRATPEGARDYLVPSRVSNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +  S + 
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFMSDDD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +     +                F + + +  +EA   YA+ D          
Sbjct: 248 IMDLMEGMTVKMFDELLG----------IKFDKFQRMPYSEAMRDYAS-DKPDLRIPLKL 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   L    +         D    I 
Sbjct: 297 VDVADLMQDVEFKVFAGPAKDPKGRIV 323



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 49/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KIGHDLNLATCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEEVKNNPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEIGGGSLRIYTLEMQKAIFEALGI----NEEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TGA++I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLVMLMTGASSIRDVIAFPKTKTAE 562


>gi|258593720|emb|CBE70061.1| Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase
           (Aspartate-/asparagine-tRNA ligase) (AspRS) [NC10
           bacterium 'Dutch sediment']
          Length = 593

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 65/186 (34%), Gaps = 18/186 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R+ +  +   Y   + FIE+++  L   +P     ++            
Sbjct: 141 RRPSMLYNLRLRHKVTQAAHSYLDRHGFIEVETPMLTRSTPEGARDYLVPSRLNPGEFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMVAGIDRYYQIVKCFRDEDLRADRQPEFTQIDLEMSFVDRDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    E A +                  +T AEA  R+  +D   T    + 
Sbjct: 255 VLEVTEGLVVALFEAAGKSSLP---------RPFPRLTYAEAIDRF-GLDTPDTRFGMEL 304

Query: 192 PDRHLL 197
            D   L
Sbjct: 305 ADLTEL 310



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 58/178 (32%), Gaps = 9/178 (5%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL   + +  +     L     + G  +   D  +   + ++   +              
Sbjct: 396 DLLLLVADQAKTAAETLGRLRVKLGHELKLIDESALAVTWVIDFPLLEYDREQGRWQAMH 455

Query: 241 YP--APESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           +P  AP      ++  DP     K ++L     EL      +     Q   F        
Sbjct: 456 HPFTAPMDEDLPLFDTDPGRIRAKAYDLVVNGQELGGGSIRIHRRDVQSRMF----AALG 511

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               E        +  L    P   G+A GFDR++ L+ GA +I +VI  P +Q   +
Sbjct: 512 IGAEEARAKFGFLMDALEYGAPPHGGLAFGFDRVIALLAGAASIRDVIAFPKTQKAVD 569


>gi|124506113|ref|XP_001351654.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23504582|emb|CAD51461.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 722

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 89/283 (31%), Gaps = 25/283 (8%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
              D  +K  YL  S + S  + L      +F    ++R        H  EF MLE   A
Sbjct: 456 FENDFFKKACYLNVSSQLSL-ECLCCSIGDVFTLNPSFRAENSNTFRHLSEFLMLEVELA 514

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             + + ++      I+     A  K      +N     + +         ++  I     
Sbjct: 515 FSNLKDIIDISEEYIKEMITYALYKSEDVNYLNEYHDKDLKNKLENILNKKFVLITYDEA 574

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           ++   + +              V +D  W   FS    +K           ++  YP   
Sbjct: 575 INILKKEN--------------VFYDFQWGKDFSFE-EQKYLATNYFKAPVVIINYPTHI 619

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                    D +     ++   ++       E           +K+M+ KK        +
Sbjct: 620 KPFYMKLNEDEKTVSCMDIIFPDVGEVVGGSER---EINLKNLKKQMENKKLN----MKL 672

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            + ++          +G  +G DRL+M ++  NNI +V+  P 
Sbjct: 673 YDPYIQLRKHGNIPHAGFGIGMDRLIMFLSSINNIRDVVTFPR 715


>gi|302406140|ref|XP_003000906.1| asparaginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261360164|gb|EEY22592.1| asparaginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 588

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 48/350 (13%), Positives = 103/350 (29%), Gaps = 42/350 (12%)

Query: 10  WNR----DFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           W+       H   R       +  R  ++ +  + F +    ++   +L  +   E    
Sbjct: 262 WDPAMLDQRHLVLRGDNASAIMKIRAAVEWAFVKTFNDMNITKVSPPALVQTQV-EGGST 320

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            FS       +  +  YL  S +   +  L +    ++C   ++R        H  E+T 
Sbjct: 321 LFSVP-----YYDEAAYLTQSSQLYLETCLPS-LGDVYCIEKSFRAERSLTRRHLAEYTH 374

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E      S+E L++    I+    +          +V     +  E         +Y +
Sbjct: 375 VEAELDFISFEDLLEHLEEIMCRVIDTVLADPIIAAHVKELNPT-FERPVRPFNRMKYTD 433

Query: 180 -IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            ID     D P   +                    + D  +     ++     IN    L
Sbjct: 434 AIDWLNAQDPPILNEE--------------GKPHVFGDDIAEAAERRM--TDIINKPIFL 477

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
             +P    +      P+DPR T+  ++    +       E++    +   +E+ M    K
Sbjct: 478 THFPTEIKAFYMKKDPSDPRVTESVDVLMPGV------GEIVGGSMRMEGYEELMAAYDK 531

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               +                  G  +G +R +  +   + +      P 
Sbjct: 532 QGIPSKDYYWYTDQRKYGTSPHGGYGLGLERFLAWLANQHTVRTTCLYPR 581


>gi|262380200|ref|ZP_06073355.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|262298394|gb|EEY86308.1| aspartyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 594

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 68/207 (32%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R Y  EN F+++++  L   +P     ++            
Sbjct: 134 RRPEMLDRLRFRSKVTNLIRNYLDENGFLDVETPILTRATPEGARDYLVPSRVSNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +  S + 
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFMSDDD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +     +                F + + +  +EA   YA+ D          
Sbjct: 248 IMDLMEGMTVKMFDELLG----------IKFDKFQRMPYSEAMRDYAS-DKPDLRIPLKL 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   L    +         D    I 
Sbjct: 297 VDVADLMQDVEFKVFAGPAKDPKGRIV 323



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 49/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KIGHDLNLATCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEEVKNNPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEIGGGSLRIYTLEMQKAIFEALGI----NEEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TGA++I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLVMLMTGASSIRDVIAFPKTKTAE 562


>gi|238685529|sp|A3M8Q6|SYD_ACIBT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|193078326|gb|ABO13300.2| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 592

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 70/207 (33%), Gaps = 21/207 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R Y  ++ F+++++  L   +P     ++     +      
Sbjct: 134 RRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLVPSRVQNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-SYE 130
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +     +
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLNDDD 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +       I+   ++   K           F +   +  +EA   YA+ D         
Sbjct: 248 IMDLMEGMTIKLFNDLLGVK-----------FEKFRRMPYSEAMRDYAS-DKPDLRIPLK 295

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             D   L  + +         D    I
Sbjct: 296 LVDVADLMQEVEFKVFAGPAKDPKGRI 322



 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KIGHDLNLATCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEDVKSNPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS----DEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TGA +I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLVMLMTGATSIRDVIAFPKTKTAE 562


>gi|186683614|ref|YP_001866810.1| aspartyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|238691260|sp|B2J116|SYD_NOSP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|186466066|gb|ACC81867.1| aspartyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 595

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 74/201 (36%), Gaps = 22/201 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ I  ++R Y  +   FIE+++  L   +P     ++           
Sbjct: 136 RRERMAQNLQLRHQIVKAMRRYLEDLEGFIEVETPILTRSTPEGARDYVLPSRVNPGEWY 195

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E
Sbjct: 196 ALPQ------SPQLFKQLLMVSGLDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSQE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++++   +++    +                      +T AE   RY   D   T    +
Sbjct: 250 EIIELNESLVCHIFKTVKG---------IELQRPFLRLTYAEGMERY-GSDKPDTRYGLE 299

Query: 191 QPDRHLLYLQAQQAGIRVAHD 211
             D   +    + +G +V  D
Sbjct: 300 LVD---VSDIVKDSGFKVFRD 317



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 46/153 (30%), Gaps = 9/153 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +          I    + E       +        +P       ++   
Sbjct: 417 RLRQAIAREFNLIDPDKINLLWITDFPMFEWNADEKRLEAL----HHPFTAPHPDDLSDL 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +E+      +     Q+  FE           E        L    
Sbjct: 473 KTARAQAYDLVLNGVEVGGGSLRIYQREIQQQVFEAIGLS----PEEAQSKFGFLLEAFE 528

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DRLVML+ G  +I +VI  P
Sbjct: 529 YGTPPHGGIAYGLDRLVMLLAGEESIRDVIAFP 561


>gi|163786609|ref|ZP_02181057.1| aspartate--tRNA ligase [Flavobacteriales bacterium ALC-1]
 gi|159878469|gb|EDP72525.1| aspartate--tRNA ligase [Flavobacteriales bacterium ALC-1]
          Length = 584

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 89/296 (30%), Gaps = 21/296 (7%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R  +   +R Y   + FIE+++  L   +P      R F     +    
Sbjct: 133 RRNPVKESLIFRAKVTQEVRNYLSGDGFIEVETPYLIKSTPEG---ARDFVVPSRMN--- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E 
Sbjct: 187 EGEFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + R   +  N              +    +   +       ++ G        
Sbjct: 247 ILNVFEGLTRHLLKEVNGVEIEKFPRMLYDDA--MRLYGNDKPDIRFGMEFGELNAVTQH 304

Query: 192 PDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILDR-----YPAPE 245
            D ++        GI V   +        +++     P +G              Y +  
Sbjct: 305 KDFNVFNNAELVVGIAVPGGNSYTRKEIDKLIDWVKRPQVGALGMVYSRCNDDGSYKSSV 364

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
               +      ++ +          +C    E      Q      E+ E+  + + 
Sbjct: 365 DKFYDQDDL-AKWAEVTGA-KAGDLICVLSGETNKVRAQLSALRMELAERIGLRDP 418



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 45/157 (28%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R         +    L+E  E     +        P P          
Sbjct: 404 ALRMELAERIGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTKP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q    +     E + + +            +
Sbjct: 464 GEVKANAYDLVLNGNEIGGGSIRIHDKAIQAIMLKHLGFSEEEARAQFG--------FLM 515

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   G+A G DRLV ++ G   I + I  P
Sbjct: 516 DAFEYGAPPHGGLAFGLDRLVAILGGQETIRDFIAFP 552


>gi|262371057|ref|ZP_06064379.1| aspartyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262313943|gb|EEY94988.1| aspartyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 594

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 69/207 (33%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R YF +N F+++++  L   +P     ++            
Sbjct: 134 RRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLVPSRVSNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +  S + 
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDVETSFMSDDD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +     +                F +   +T  +A   YA+ D          
Sbjct: 248 IMDLMETLTVKMFKELLD----------VQFDKFPRMTYTDAMRDYAS-DKPDLRIPLKL 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   L  + +         D    I 
Sbjct: 297 VDVADLMQEVEFKVFAGPAKDPKGRIV 323



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KVGHDLKMSTCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEDVKNNPGAALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      + +   Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEIGGGSLRIHNLEMQKAIFEALGI----GEEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TG  +I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLVMLMTGGASIRDVIAFPKTKTAE 562


>gi|253997486|ref|YP_003049550.1| aspartyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253984165|gb|ACT49023.1| aspartyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 595

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 73/196 (37%), Gaps = 19/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R  +  +LR+Y   N FIE+++  L   +P     ++            
Sbjct: 132 RRPAMQKNMMLRYRVAKTLRDYLDVNGFIEVETPMLTRSTPEGARDYLVPSRVHH----- 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +      
Sbjct: 187 -GQFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQPEFTQVDIETSFMEEND 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M     +IR   +            N +  ++   +  AEA  RY +   D+  TL+  
Sbjct: 246 IMDLVEEMIRQMLKNV---------QNVDLPAKFPRMPFAEAMNRYGSDKPDMRVTLEIT 296

Query: 190 DQPDRHLLYLQAQQAG 205
           +  D          AG
Sbjct: 297 ELSDVMKDVDFKVFAG 312



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L        G           +    + E  E N            P        +   
Sbjct: 412 ALRLKVGHDKGHVDGRAWAPLWVVDFPMFEHDEENDRWVALHHPFTAPKDGHEDLLVSNP 471

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               +K +++     E+      +     Q   F+     ++    E        L  L 
Sbjct: 472 GACLSKAYDMVLNGWEVGGGSVRIHKQDVQSKVFDALKISRE----EAQEKFGFLLDALQ 527

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DRLV L+ GA +I +VI  P
Sbjct: 528 YGAPPHGGLAFGLDRLVTLMAGAESIRDVIAFP 560


>gi|270308031|ref|YP_003330089.1| aspartyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153923|gb|ACZ61761.1| aspartyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 598

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 15/181 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+   S +RE+     FIEI++  L   +P      R +     +    
Sbjct: 133 RRQGMKNNLIIRHKAVSFMREFLNTRGFIEIETPILIKSTPEG---ARDYLVPSRLF--P 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG EK +  A  +R+ +     QPEFT L+   +      +
Sbjct: 188 GQFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQPEFTQLDMEMSFVDENDM 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M+   ++                  +     +   I+ A+A  +Y   D        +  
Sbjct: 248 MQLMEDLFTGLVASV--------RPDMKYNKKFPRISFADAMEKY-GCDKPDLRFGMELA 298

Query: 193 D 193
           D
Sbjct: 299 D 299



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 57/165 (34%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A + G+   ++ +++ +    L +  E     +        P            
Sbjct: 417 EMRNHLAAKLGLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLEADMPLMDTDP 476

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
               ++ +++     E+      +     QR  F       +++ E+     E +     
Sbjct: 477 AKVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFHLLGYNDEQINERFGHLLEAFEF--- 533

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                   P   G+A G DR VML+ G  +I EVI  P +Q+ Q+
Sbjct: 534 ------GAPPHGGVAPGIDRFVMLLAGETSIREVIPFPKNQAAQD 572


>gi|291543723|emb|CBL16832.1| aspartyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 587

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 69/191 (36%), Gaps = 21/191 (10%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQD 70
            RR P    L+ R+ I  + REYF  N FIEI++  + + +P     ++           
Sbjct: 132 LRRAPLQRNLVMRHQIAKAAREYFYANDFIEIETPMMMKSTPEGARDYLIPSRVHPGKFY 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++    A  +R+ +     QPEFT ++   +    E
Sbjct: 192 ALPQ------SPQIYKQLLMVAGMDRYIQLARCFRDEDLRADRQPEFTQIDLEMSFVDVE 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +++     +    +    +                 ++ AEA  R+   D   T    +
Sbjct: 246 DILQMAEGFVHHVFQQVLGREIP---------LPLPRLSYAEAMNRF-GSDKPDTRYGME 295

Query: 191 QPDRHLLYLQA 201
             D        
Sbjct: 296 IQDISEYVKDC 306



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 54/165 (32%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  I      E  E N            P  +         
Sbjct: 407 ALRQTVARKLDLIPEGQFNFLWITQMPFFEWDEDNNCWMAMHHPFTMPEDDCLQYLDSAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +    K F+L     EL +    + +   Q+  F+      +E++ K     E Y     
Sbjct: 467 EKVIAKAFDLVLNGTELSSGSIRITNYELQQKMFQALGLTDEEIEAKFGFLVEAYRF--- 523

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                   P   G+ +G DRL M++ G +++ +V   P  Q+  E
Sbjct: 524 ------GAPPHGGMGIGLDRLAMVMLGVDSLRDVTAFPKVQNASE 562


>gi|304415265|ref|ZP_07395962.1| aspartyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304282891|gb|EFL91357.1| aspartyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 640

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
              G++        P   ++              +++     E+      +     Q+  
Sbjct: 443 DQGGLSAMHHPFTSPKEMTSAELKANPTAAIANAYDMVINGYEVGGGSVRIHCSEMQQQV 502

Query: 288 F----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           F     +E ++++K            L  L    P  +G+A G DRLVML+T  +NI +V
Sbjct: 503 FSLLGIEEAEQREKFG--------FLLDALKYGAPPHAGLAFGLDRLVMLLTDCDNIRDV 554

Query: 343 IWTP 346
           I  P
Sbjct: 555 IAFP 558



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 46/129 (35%), Gaps = 18/129 (13%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +    + +   + R            L  R  I + +R +     F++I++  L   
Sbjct: 109 PLDNNHINSEEQRLKYRYLDLRRPEMAQRLKTRAKITALVRRFMENQGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHQGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTM 119
              QPEFT 
Sbjct: 223 SDRQPEFTQ 231


>gi|238484395|ref|XP_002373436.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus flavus
           NRRL3357]
 gi|220701486|gb|EED57824.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus flavus
           NRRL3357]
          Length = 542

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 62/402 (15%), Positives = 105/402 (26%), Gaps = 65/402 (16%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFV---ENQFIEIDSMSLQYS 52
           + QIP         H R R          R+     L   F       ++++    +  S
Sbjct: 144 LRQIP---------HLRMRTPFSSLLSRFRSECLYQLGNVFRFAPNGGYVQVHPPLITSS 194

Query: 53  ---PGNETHI----RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                 ET       A   +   +   R P YL  S +   +   AA    ++  +  +R
Sbjct: 195 DCEGAGETFTVLPREAMGAQSEGEHFFRAPKYLTVSSQLHLEAY-AAELGNVWTISPMFR 253

Query: 106 NGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNII------RCAAEVANQKIFSFQNVN 158
             +     H  EF MLE    +      + D +  I      R       Q+I S +   
Sbjct: 254 AEKSDTPRHLSEFYMLEAEMNYMHDLDSLTDSVEYILRDLVRRLHDTPVGQEILSAKRSG 313

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   + E             ++               L     +      H   W+   
Sbjct: 314 ESGQDQTEGSGANLKQRWNDMMEGPKWGRMTYTQAIEKLQDAVAKGQATFEHAPEWTGGL 373

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
                + I   +       +  YP        +           E  AC   L     E+
Sbjct: 374 QLEHEKYIVDVIHNGRPVFVTDYPKVVKPFYMLPSNGDSSAAPGETVACFDLLLPEVSEV 433

Query: 279 LDPIEQRHRF-EKEMQEKKKI--------------------YNETYPID-----EDF--- 309
                + HR        ++                       +ET         ED    
Sbjct: 434 AGGSLREHRLPNIIQNMREHGLIKTRAPPALEAEAEAGAQADSETPMYPHLLPGEDLGHL 493

Query: 310 --LACLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              A L         G  +GFDR +  + G ++I +V+  P 
Sbjct: 494 QWYADLRRWGTAPHGGFGLGFDRFLGYLAGVSSIRDVVSFPR 535


>gi|73748507|ref|YP_307746.1| aspartyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|97196660|sp|Q3ZX84|SYD_DEHSC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|73660223|emb|CAI82830.1| aspartyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 598

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 15/181 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +RE+  +  FIEI++  L   +P      R +     +    
Sbjct: 133 RRQGMKNNLIIRHKAVRFMREFLNDQGFIEIETPILIKSTPEG---ARDYLVPSRLF--P 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ AG EK +  A  +R+ +     QPEFT L+   +    E +
Sbjct: 188 GKFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQPEFTQLDMEMSFVDEEDM 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           MK   ++                  +     +   I+ A+A  +Y   D        +  
Sbjct: 248 MKLMEDLFTGLVANV--------RPDMKYNKKFPRISFADAMEKY-GCDKPDLRFGMELA 298

Query: 193 D 193
           D
Sbjct: 299 D 299



 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A +  +   ++ +++ +    L +  E     +        P    +   +   
Sbjct: 417 EMRNQLAVKLNLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLE--SDMPLMDT 474

Query: 255 DPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF--- 309
           DP    ++ +++     E+      +     QR  F           +E   IDE F   
Sbjct: 475 DPGRVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFH-----LLGYNDE--QIDERFGHL 527

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L       P   G+A G DR VML+ G  +I EVI  P +Q+ Q+
Sbjct: 528 LEAFEFGAPPHGGVAPGIDRFVMLLAGETSIREVISFPKNQAAQD 572


>gi|28897821|ref|NP_797426.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260361820|ref|ZP_05774837.1| aspartate--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876981|ref|ZP_05889336.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260898718|ref|ZP_05907214.1| aspartate--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260901355|ref|ZP_05909750.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|31076997|sp|Q87QV2|SYD_VIBPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28806034|dbj|BAC59310.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308089517|gb|EFO39212.1| aspartate--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093916|gb|EFO43611.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308109585|gb|EFO47125.1| aspartate--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308113340|gb|EFO50880.1| aspartate--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328473206|gb|EGF44054.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 592

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q +      E   +  +EA  R+   D     +  + 
Sbjct: 244 VREVTEKMVREM----------WQELLNVDLGEFPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 8/146 (5%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  + TW+ ++        E + G ++        P   +A           +  +
Sbjct: 415 KDLGLTKEGTWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAVANSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACLT-EMPQSS 320
           ++     E+      + +   Q   F+        I  E   +   FL   L    P  +
Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDIL-----GIDAEEQQLKFGFLLDALKFGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DRLVML+ G  NI +VI  P
Sbjct: 530 GLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|293390528|ref|ZP_06634862.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951062|gb|EFE01181.1| aspartyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 592

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 70/207 (33%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I   +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQHLKTRAKITGFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++             +Q++      +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGL----------WQHILGVDLGKFPVMTWQEAMRRF-GSDKPDLRNLLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   +         +   +D    + 
Sbjct: 294 VDVADIVKNVDFKIFQGPANDPNGRVI 320



 Score = 96.6 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 57/189 (30%), Gaps = 21/189 (11%)

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            E +        +   D   T  +     R       +  G+    +     +    + E
Sbjct: 382 FERVGAQTGDILFFGADKWQTATDSMGALR---LKLGRDLGLTRLDEWQPLWVIDFPMFE 438

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           + +              P   +               +++     E+      + DP  Q
Sbjct: 439 RDDEGCLAAMHHPFTS-PKDFTPEQLEADPTSAVANAYDMVINGYEVGGGSVRIFDPKMQ 497

Query: 285 RHRF------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
           +  F      E++ +EK              L  L    P  +G+A G DRL ML+TG  
Sbjct: 498 QTVFRILGIDEEQQREKFG----------FLLDALKFGTPPHAGLAFGLDRLTMLLTGTE 547

Query: 338 NINEVIWTP 346
           NI +VI  P
Sbjct: 548 NIRDVIAFP 556


>gi|187735889|ref|YP_001878001.1| aspartyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425941|gb|ACD05220.1| aspartyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 597

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 74/204 (36%), Gaps = 21/204 (10%)

Query: 2   HQIPSQPWWNRDFHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGN 55
             + ++    +      RRP +      R+ +  S R+Y  E+ F+EI++  L   +P  
Sbjct: 122 RALSNEDLRLKYRFLDLRRPTMARNMQIRHRVTKSTRDYLDEHGFLEIETPILSKSTPEG 181

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
               R F     +     K   L  +P+   + L+ AG E+ F  A  +R+ +     QP
Sbjct: 182 ---ARDFLVPSRL--APGKFYALPQAPQQYKQLLMVAGMERYFQIARCFRDEDLRADRQP 236

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EFT ++   +  + E +      +++   + +               +    +T  EA  
Sbjct: 237 EFTQVDIEASFITPEDIYNLVEGLLKRVYKESLGVDIP---------TPFPRMTWKEAMD 287

Query: 176 RYANIDLGTTLDNPDQPDRHLLYL 199
           +Y   D           D   ++ 
Sbjct: 288 QY-GSDKPERRFGMKLTDVSSIFE 310



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 49/158 (31%), Gaps = 14/158 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L   +  +        D    I   ++    E    +       R    +         
Sbjct: 414 RLQCAEFMELLKDNKERDFLWVIEFPLVGWDEEEQRWVAIHHPFTRPVKEDEQKLLSGEL 473

Query: 255 DPR-FTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDF 309
                 + +++     EL      + +   Q   F+     E Q +++            
Sbjct: 474 SADLRAQAYDVVLNGTELGGGSIRIHERDLQSAMFKALGITEEQAREQFG--------HI 525

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L   +   P   G+A+G DRLVM++  A +I EVI  P
Sbjct: 526 LDAFSFGAPPHGGLALGLDRLVMMICNAESIREVIAFP 563


>gi|169767506|ref|XP_001818224.1| asparaginyl-tRNA synthetase Slm5 [Aspergillus oryzae RIB40]
 gi|83766079|dbj|BAE56222.1| unnamed protein product [Aspergillus oryzae]
          Length = 542

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 62/402 (15%), Positives = 105/402 (26%), Gaps = 65/402 (16%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFV---ENQFIEIDSMSLQYS 52
           + QIP         H R R          R+     L   F       ++++    +  S
Sbjct: 144 LRQIP---------HLRMRTPFSSLLSRFRSECLYQLGNVFRFAPNGGYVQVHPPLITSS 194

Query: 53  ---PGNETHI----RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                 ET       A   +   +   R P YL  S +   +   AA    ++  +  +R
Sbjct: 195 DCEGAGETFTVLPREAMGAQSEGEHFFRAPKYLTVSSQLHLEAY-AAELGNVWTISPMFR 253

Query: 106 NGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNII------RCAAEVANQKIFSFQNVN 158
             +     H  EF MLE    +      + D +  I      R       Q+I S +   
Sbjct: 254 AEKSDTPRHLSEFYMLEAEMNYMHDLDSLTDSVEYILRDLVRRLHDTPVGQEILSAKRSG 313

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   + E             ++               L     +      H   W+   
Sbjct: 314 ESGQDQTEGSGANLKQRWNDMMEGPKWGRMTYTQAIEKLQDAVAKGQATFEHAPEWTGGL 373

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
                + I   +       +  YP        +           E  AC   L     E+
Sbjct: 374 QLEHEKYIVDVIHNGRPVFVTDYPKVVKPFYMLPSNGDSSAAPGETVACFDLLLPEVSEV 433

Query: 279 LDPIEQRHRF-EKEMQEKKKI--------------------YNETYPID-----EDF--- 309
                + HR        ++                       +ET         ED    
Sbjct: 434 AGGSLREHRLPNIIQNMREHGLIKTRAPPALEAEAEAGAQADSETPMYPHLLPGEDLGHL 493

Query: 310 --LACLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              A L         G  +GFDR +  + G ++I +V+  P 
Sbjct: 494 QWYADLRRWGTAPHGGFGLGFDRFLGYLAGVSSIRDVVSFPR 535


>gi|312623086|ref|YP_004024699.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203553|gb|ADQ46880.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 594

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +   +R +  +N FIEI++  L   +P     ++            
Sbjct: 140 RRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLVPSRIFPGKFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 200 LPQ------SPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQPEFTQIDIEMSFVDVDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +++                        E     +   R+  ++L    D    
Sbjct: 254 VIEINEKLLQTIFREMLGIDLKLPLPRLTYKEAMERFGSDKPDTRF-GMELVDITDIVKN 312

Query: 192 PDRHLLYLQAQQAG 205
            +  +    A + G
Sbjct: 313 CEFKVFADAANKGG 326



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 49/158 (31%), Gaps = 9/158 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A++  +          +    L E  E              P  E         
Sbjct: 414 NLRLEIARKLNLLDKSKFNLLWVTEFPLFEYSEEEGRFVAKHHPFTSPMDEDLEFLETDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
               +K +++     E+      +  P  Q+  F      K   + E    D     L  
Sbjct: 474 TKVRSKAYDIVLNGTEIGGGSIRIHSPELQKRMF------KALGFTEERAQDRFGFLLEA 527

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                P   GIA GFDRL ML+ G ++I + I  P  +
Sbjct: 528 FKYGTPPHGGIAYGFDRLCMLLLGLDSIRDTIAFPKVK 565


>gi|303245827|ref|ZP_07332109.1| aspartyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302492610|gb|EFL52478.1| aspartyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 601

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 22/182 (12%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP     L+ R+    S+R Y     F+E+++  L   +P      R F     I +  
Sbjct: 146 RRPKLAGNLILRHHAVQSIRRYLDGLGFLEVETPVLTRSTPEG---ARDFLVPSRINNG- 201

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    EQ
Sbjct: 202 --SFYALPQSPQLFKQLLMMSGFDRYYQVVKCFRDEDLRADRQPEFTQVDIEMSFVDEEQ 259

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    N++R   + A         ++         +T A+A   Y  +D          
Sbjct: 260 IMGMAENMVRTMFKEA---------MDIALPDVFPRMTYADAIRDY-GLDKPDVRFGLKL 309

Query: 192 PD 193
            D
Sbjct: 310 VD 311



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           ++ ++L     E+      + D   Q+  F     E      E        L  L    P
Sbjct: 479 SRAYDLVLNGNEIGGGSIRIHDRATQKAMFAALGIE----DQEAEDKFGFLLKALEFGAP 534

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              GIA G DRL+M++ GA +I +VI  P
Sbjct: 535 PHGGIAFGLDRLIMILAGAKSIRDVIAFP 563


>gi|254282547|ref|ZP_04957515.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678750|gb|EED35099.1| aspartyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 596

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 67/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ I   +R +     F++I++  L   +P     ++    T       
Sbjct: 132 RRPEMQSNLIARSKITYGVRAFLEGEGFLDIETPILTRATPEGARDYLVPSRTHPGEFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +      
Sbjct: 192 LPQ------SPQLFKQLLMVAGFDRYYQIARCFRDEDLRADRQPEFTQIDIETSFLEERD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +++             Q+       +  +++  EA  RY +      +D    
Sbjct: 246 VMDITERMVKSLF----------QDHLGVTLPDFPHMSWHEAMDRYGSDKPDLRIDLELV 295

Query: 192 PDRHLLYL 199
               L+  
Sbjct: 296 SISDLMQE 303



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 66/186 (35%), Gaps = 11/186 (5%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E +  A+    +   D    ++      R      A+  G RV+ D     +    + E 
Sbjct: 384 ERLGAADGDIIFFGADKARVVNEALGALR---IKVAEDLG-RVSDDWKPLWVVDFPMFEN 439

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
                 +         PA +       PA+   ++ +++     E+      + D + Q+
Sbjct: 440 DAD-GDLTPLHHPFTAPACDVETLKADPANA-LSRAYDMVLNGSEIGGGSIRIHDQVMQQ 497

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F+           E        L+ L    P   G+A G DRL+ L+ G ++I +VI 
Sbjct: 498 AVFD----LLGIGPEEAEEKFGFLLSALQYGAPPHGGLAFGLDRLITLMVGGHSIRDVIA 553

Query: 345 TPFSQS 350
            P +QS
Sbjct: 554 FPKTQS 559


>gi|145640262|ref|ZP_01795846.1| aspartyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274848|gb|EDK14710.1| aspartyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 588

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 67/207 (32%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGLWLDTIGVDLG----------KFPVMTWQEAMRRF-GSDKPDLRNPLEI 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   +    +        ++    + 
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRVV 320



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWKPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|88861321|ref|ZP_01135952.1| aspartate tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88816700|gb|EAR26524.1| aspartate tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 590

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 62/188 (32%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRIEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSDQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +IR                      +   +   EA +RY +            
Sbjct: 244 VREVTEKMIRQMWNELLNVDLG----------DFPVMPYYEAMSRYGSDKPDLRNPLELV 293

Query: 192 PDRHLLYL 199
               LL  
Sbjct: 294 DVADLLKD 301



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 50/147 (34%), Gaps = 10/147 (6%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +     W+ ++        E + G ++        P   +            +  +
Sbjct: 415 LDLNLTDLKAWAPLWVVDFPMFEEDDEGTLHAVHHPFTAPKDMTPAQLEADPASAISDAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQS 319
           ++     E+      + +   Q   F      +    NE    D+    L  L    P  
Sbjct: 475 DMVLNGYEVGGGSVRIFNNDMQATAF------RILGINEQEQQDKFGFLLDALKYGTPPH 528

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
           +G+A G DRL ML+ G +NI +VI  P
Sbjct: 529 AGLAFGLDRLTMLLCGTDNIRDVIAFP 555


>gi|222528610|ref|YP_002572492.1| aspartyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455457|gb|ACM59719.1| aspartyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 594

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +   +R +  +N FIEI++  L   +P     ++            
Sbjct: 140 RRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLVPSRIFPGKFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 200 LPQ------SPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQPEFTQIDIEMSFVDVDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +++                        E     +   R+  ++L    D    
Sbjct: 254 VIEINEKLLKAIFGEMLGIDLKLPLPRLTYKEAMERFGSDKPDTRF-GMELVDITDIVKN 312

Query: 192 PDRHLLYLQAQQAG 205
            +  +    A + G
Sbjct: 313 CEFKVFSDAANKGG 326



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 49/158 (31%), Gaps = 9/158 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A++  +          +    L E  E              P  E         
Sbjct: 414 NLRLEIARKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDLEFLEIDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
               +K +++     E+      +  P  Q+  F      K   + E    D     L  
Sbjct: 474 AKVRSKAYDIVLNGTEIGGGSIRIHSPEIQKRMF------KALGFTEERAQDRFGFLLEA 527

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                P   GIA GFDRL ML+ G ++I + I  P  +
Sbjct: 528 FKYGTPPHGGIAYGFDRLCMLLLGLDSIRDTIAFPKVK 565


>gi|313203172|ref|YP_004041829.1| aspartyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312442488|gb|ADQ78844.1| aspartyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 590

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 20/186 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ I   LR Y  +  F+E+++  L   +P      R F     +   
Sbjct: 131 LRRNNVRENLELRHRITFELRRYLDQMNFLEVETPILIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E
Sbjct: 186 -PGEFYALPQSPQLFKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQE 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     +++   +            N +       +T  +    Y +       +   
Sbjct: 245 DVLNLFEGMMKHLFKFV---------KNIDFTEAFPRMTWEDGMKYYGSDKPDIRFEMKF 295

Query: 191 QPDRHL 196
              +  
Sbjct: 296 VELKEA 301



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 55/176 (31%), Gaps = 19/176 (10%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL   L    +  +  L     + G R+ + +        I+   +              
Sbjct: 386 DLILILAGEKRKTQKALCELRLEMGARLGYRNKDVYAPLWIIDFPLFEWDEDTQRFYATH 445

Query: 241 YPAPESALANIY--PADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFE------K 290
           +P     L +I     DP       +++    +EL      + D   Q   F+      +
Sbjct: 446 HPFTSPNLDDIPLLETDPGAVRATAYDMVINGVELGGGSIRIHDSALQHQMFKHLGFTPE 505

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + + +       +             P   G+A G DRLV L  G ++I + I  P
Sbjct: 506 QAEAQFGFLMSAFQ---------YGAPPHGGLAFGLDRLVSLFAGLDSIRDCIAFP 552


>gi|269963127|ref|ZP_06177462.1| aspartyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269832091|gb|EEZ86215.1| aspartyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 592

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R            +Q +      E   +  +EA  R+   D     +  + 
Sbjct: 244 VRATTEKMVREM----------WQELLNVDLGEFPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 18/151 (11%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  + TW+ ++        E + G ++        P   +A           +  +
Sbjct: 415 KDLELTKEGTWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAVANSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT-E 315
           ++     E+      + +   Q   F+      +E Q K              L  L   
Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFG----------FLLDALKFG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|187250796|ref|YP_001875278.1| aspartyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|238064708|sp|B2KBB9|SYD_ELUMP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|186970956|gb|ACC97941.1| Aspartyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 583

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 76/207 (36%), Gaps = 32/207 (15%)

Query: 3   QIPSQPWWNR----DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
           Q+P +P  +R    +   + R            L  R+ +  + R YF +N FIEI++  
Sbjct: 107 QLPFEPDNSRQINEETRLKYRYIDLRNPVMLHNLTTRHKVAQAARRYFSDNGFIEIETPI 166

Query: 49  LQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
           L   +P     ++            + +      SP+   + L+A+G ++ F  A A+R+
Sbjct: 167 LTRSTPEGARDYLVPSRVHEGKFYALPQ------SPQMFKQTLMASGVDRYFQIARAFRD 220

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
            +     QPE T ++   +  +   +      +I    + A             P +  E
Sbjct: 221 EDLRSDRQPEHTQIDIEMSFVTLADVFAAGEGMIAEVFKAAG---------EDAPAAPFE 271

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPD 193
            +  A+  A+Y   D        D  D
Sbjct: 272 QMEYADVMAKY-GSDKPDIRYEIDITD 297



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 42/160 (26%), Gaps = 21/160 (13%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           + L+ L   +   + A                +      +        P  +        
Sbjct: 409 KELIKLLCLKPNKKWAFLWVKHFPLLE----FVPEENRWDAAHNPFTAPLEKDIPLLDTD 464

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDE 307
                + +F+L    +EL +          Q           ++   +  +         
Sbjct: 465 PGKVKSYQFDLVLNGVELASGSIRNHRRDLQEKILNLMKHSPEQAALRFGM--------- 515

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L  L    P   G  MG DRL  L+    +I EVI  P
Sbjct: 516 -LLNALEAGAPPHGGFGMGLDRLAALLCKEESIREVIAFP 554


>gi|163751781|ref|ZP_02158998.1| aspartyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161328345|gb|EDP99505.1| aspartyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 595

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R  + S +R +   N F++I++  L   +P     ++    T      +
Sbjct: 132 RRPEMAERIIFRAKVTSVVRRFLDGNGFLDIETPILTKATPEGARDYLVPSRT------Y 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S  Q
Sbjct: 186 KGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSAQ 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R   +                  E   +T AEA  R+   D     +  + 
Sbjct: 246 VMDKTEEMMRSLFKELLDVDLG----------EFPKMTFAEAMRRF-GSDKPDLRNPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L         +    D    +
Sbjct: 295 IDVADLLTDVDFKVFQGPATDPEGRV 320



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 50/155 (32%), Gaps = 7/155 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL--GINCCTILDRYPAPESALANIY 252
             +     +AG               +     EP    G++        P+  +      
Sbjct: 406 EAMGALRIKAGEDFDLLKGDWKPLWVVDFPMFEPTSDGGLHAMHHPFTAPSGMTPEQLEA 465

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
                 +  +++     EL      + +   Q   F     E      E        L  
Sbjct: 466 DPTAAISDAYDMVLNGCELGGGSVRIHNSEMQTAVFRILGIE----EEEANEKFGFLLEA 521

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P  +G+A G DR+VML+TGA++I +V+  P
Sbjct: 522 LRYGTPPHAGLAFGLDRIVMLMTGASSIRDVMAFP 556


>gi|310829068|ref|YP_003961425.1| aspartyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308740802|gb|ADO38462.1| aspartyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 591

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 71/193 (36%), Gaps = 7/193 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
              + +  L  R  + S  R +  +  F+EI++  L + +P      R F     +Q   
Sbjct: 137 RKPKNQKMLKTRAQVASIARNFLNDEGFLEIETPILGKPTPEG---ARDFLVPSRVQK-- 191

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +  + + +
Sbjct: 192 GKFFGLPQSPQLFKQILMISGVDRYYQVAKCFRDEDLRQDRQPEFTQIDMEMSFITKDDI 251

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    N+I                +        +     +   R+  ++L    D  +  
Sbjct: 252 LPIMENMIAKIFREVRGIELETPFIRMTYQEAMDRFGSDKPDTRF-GMELTNISDIVENS 310

Query: 193 DRHLLYLQAQQAG 205
           +  +     ++ G
Sbjct: 311 EFKVFSGAVKKGG 323



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 60/197 (30%), Gaps = 18/197 (9%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLY---------LQAQQAGIRVAHDDTWSD 216
           ++I+  E  A +  +D           D   +            A++    ++    +  
Sbjct: 373 KFISEEEKNAIFERMDAEPGDMIFIVADTDEIVCTALGQLRLELAKKLEFDLSGKFNFLW 432

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +    L+E                 P  +                +++    +EL     
Sbjct: 433 VIDFPLLEYDAEAGRYVAKHHPFTAPLDKDLPLLETDPSQVHADAYDMVVNGVELGGGSI 492

Query: 277 ELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLV 333
            + +   Q   F      K       + +      L  L    P   G+A G DRL+M++
Sbjct: 493 RIHNQDVQEKMF------KALGFTMEDAWKQFGFLLEALKYGTPPHGGLAFGLDRLIMML 546

Query: 334 TGANNINEVIWTPFSQS 350
              +NI +VI  P +Q+
Sbjct: 547 MDIDNIRDVIAFPKTQN 563


>gi|293611096|ref|ZP_06693395.1| aspartyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|292826748|gb|EFF85114.1| aspartyl-tRNA synthetase [Acinetobacter sp. SH024]
          Length = 594

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 70/208 (33%), Gaps = 21/208 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R Y  ++ F+++++  L   +P     ++     +      
Sbjct: 134 RRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLVPSRVQNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-SYE 130
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +     E
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLNDDE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +       ++   ++   K           F +   +  +EA   YA+ D         
Sbjct: 248 IMDLMEGMTVKLFNDLLGVK-----------FEKFRRMPYSEAMRDYAS-DKPDLRIPLK 295

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
             D   L  + +         D    I 
Sbjct: 296 LVDVADLMQEVEFKVFAGPAKDPKGRIV 323



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KIGHDLNLSTCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEDVKSNPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS----DEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TGA +I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLVMLMTGATSIRDVIAFPKTKTAE 562


>gi|229846405|ref|ZP_04466513.1| aspartyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810498|gb|EEP46216.1| aspartyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 588

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGLWLDTIGVDLG----------KFPVMTWQEAMCRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWKPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSLEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|242277624|ref|YP_002989753.1| aspartyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242120518|gb|ACS78214.1| aspartyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 607

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 67/187 (35%), Gaps = 21/187 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP      + RN    S+R Y     F+EI++  L   +P      R F     + +  
Sbjct: 155 RRPVLAKNFILRNKAAQSVRRYLDNLGFLEIETPVLTKSTPEGA---RDFLVPSRMNNG- 210

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +  + EQ
Sbjct: 211 --DFYALPQSPQLFKQMLMVSGMDRYFQIVKCFRDEDLRADRQPEFTQIDIEMSFVNEEQ 268

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R   +   +                  +T A+A   Y         D   Q
Sbjct: 269 VMGMAEEMVRTVFKETIETELPAS---------FPRMTYADAMRDYGCDKPDVRFDLKLQ 319

Query: 192 PDRHLLY 198
               +  
Sbjct: 320 EATDIFK 326



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 42/131 (32%), Gaps = 14/131 (10%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +L    +    +         P                 + ++L     E+      +  
Sbjct: 452 LLEYNADEKRYVARHHPFTS-PQEGQIDELGDKPAEALARAYDLVMNGYEVGGGSIRIHT 510

Query: 281 PIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           P  Q+  F      E + + K            +  L    P   GIA G DRL+M++ G
Sbjct: 511 PEMQQKMFAALGIDEEEARAKFG--------FLMDALQFGAPPHGGIAFGLDRLIMILCG 562

Query: 336 ANNINEVIWTP 346
           A +I +VI  P
Sbjct: 563 AKSIRDVIAFP 573


>gi|301057107|ref|ZP_07198247.1| aspartate--tRNA ligase [delta proteobacterium NaphS2]
 gi|300448788|gb|EFK12413.1| aspartate--tRNA ligase [delta proteobacterium NaphS2]
          Length = 727

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 63/192 (32%), Gaps = 20/192 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +   LKR  I   +R+Y     FIEI++  L   +P     ++            
Sbjct: 151 RRPSVQDIFLKRYQIIKCIRDYLDTLNFIEIETPFLTRSTPEGARDYLVPSRIHHGKFYA 210

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT L+   +    E+
Sbjct: 211 LPQ------SPQLFKQILMIGGMDRYFQIARCFRDEDLRPNRQPEFTQLDLEASFID-EE 263

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--NIDLGTTLDNP 189
            + + +  +            S              +T   A  +Y     DL   +   
Sbjct: 264 FIYETLEALTVQMFAVGGISLS---------GPFPRMTYETAMNKYGTDRPDLRFKMAFE 314

Query: 190 DQPDRHLLYLQA 201
           D  D       A
Sbjct: 315 DTTDIFQDTQYA 326



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 22/122 (18%)

Query: 240 RYPAPESALANIYPADPR-----FTKRFELYACNIELCNACDELLDPIEQRHRF------ 288
            +P       +  P D        ++ ++L     EL      +     Q   F      
Sbjct: 466 HHPFTMPDRTDFDPTDTEALLTLKSRAYDLVMNGEELGGGSIRIHRMDVQEKIFSALGLD 525

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +E   K             FL  L    P   G+A+G DR++ ++    +I +VI  P 
Sbjct: 526 HQEAAAKFG----------FFLKALEYGTPPHGGLALGLDRVIAMILKTPSIRDVIAFPK 575

Query: 348 SQ 349
           ++
Sbjct: 576 NR 577


>gi|300087788|ref|YP_003758310.1| aspartyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527521|gb|ADJ25989.1| aspartyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 598

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 60/182 (32%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNET-HIRAFSTELIIQDH 71
              R    L  R+ I + +R+Y     F+E+++   L+ +P     ++           +
Sbjct: 134 RRSRMAANLRLRHQIINHMRQYLDARGFLEVETPVLLKSTPEGARDYLVPSRV------Y 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             K   L  SP+   + L+ AG EK +  A  +R+ +     QPEFT L+   +      
Sbjct: 188 PGKFYSLAQSPQQLKQLLMVAGVEKYYQIARCFRDEDLRADRQPEFTQLDLEMSFVD--- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                   +    E     +                +  A+   R+   D        + 
Sbjct: 245 -----EEDMMELLEGLFTSLVQTVTPEKKLIQPFPRLDFADITERF-GSDKPDIRFGMEL 298

Query: 192 PD 193
            +
Sbjct: 299 TE 300



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 38/131 (29%), Gaps = 7/131 (5%)

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E              P                 + ++L     E+      +  P  Q
Sbjct: 448 WDEEEKRWQATHHPFTSPRETDLPLLESDPGSVHGRHYDLILNGYEIAGGSIRIHRPGLQ 507

Query: 285 RHRFEKEMQEKKKIYNET-YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           R  FE           E    +    L       P   G+A G DR+V ++ G   I EV
Sbjct: 508 RRVFEIL-----GHSEERIQSLFGQLLDAFEYGAPPHGGVAPGIDRVVAILAGEPTIREV 562

Query: 343 IWTPFSQSNQE 353
           I  P +Q+  +
Sbjct: 563 IAFPKNQAGID 573


>gi|194476856|ref|YP_002049035.1| aspartyl-tRNA synthetase [Paulinella chromatophora]
 gi|171191863|gb|ACB42825.1| aspartyl-tRNA synthetase [Paulinella chromatophora]
          Length = 607

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 64/197 (32%), Gaps = 8/197 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R    L  R+    + R +     FIEI++  L   +P     ++            
Sbjct: 136 RRERMNNNLRLRHNTVKAARRFLENEGFIEIETPLLTRSTPEGARDYLVPSRV------C 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 190 GGEWFALPQSPQIFKQLLMVGGIERYYQIARCFRDEDLRADRQPEFTQIDMEMSFMNQKE 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++   ++I    +                    E        ARY    +  +    + 
Sbjct: 250 ILRLNESLIASIWKEVKDIELQLPFTRMTWHEATERYGTDRPDARYGMELVNISDIVKNI 309

Query: 192 PDRHLLYLQAQQAGIRV 208
             +      A    ++ 
Sbjct: 310 EFKVFSSAIANGGSVKC 326



 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 5/99 (5%)

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                      + ++L    +EL      + +   Q+   +      +    E       
Sbjct: 478 NYRKRLPNARAQAYDLVLNGLELGGGSLRIHNSELQKQVLQTIGLSAE----EAQRQFGF 533

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +  L    P   GIA G DRLVML+ G  +I + I  P
Sbjct: 534 LMDALNMGAPPHGGIAFGLDRLVMLLAGEESIRDTIAFP 572


>gi|257455401|ref|ZP_05620636.1| aspartyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447363|gb|EEV22371.1| aspartyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 606

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  +  R    S++R Y  +  F+++++  L   +P     ++            
Sbjct: 134 RRPEMQERMKFRAKATSTIRRYLDDQGFLDVETPILTRATPEGARDYLVPSRVSNGEFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E 
Sbjct: 194 LPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLSDED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F+ +    F     +T AEA   YA+ D          
Sbjct: 248 IMNIAE----------GLTKDLFKTMMNIEFDTFPRMTYAEAMRDYAS-DKPDLRIPMKL 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   +    +         D    + 
Sbjct: 297 IDVADIMQSVEFKVFSGPAQDPKGRVV 323



 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 54/157 (34%), Gaps = 11/157 (7%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNL---GINCCTILDRYPAPESA---LANIYPADP 256
           + G+ +            +     E      G+        +P  +      A     + 
Sbjct: 422 KLGLDLNMLTQEWAPLWVVDFPMFEETDSGDGLGGKWTSVHHPFTKPKGTVEAMKNNPET 481

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
             +  +++     E+      +     Q+  FE  +   +    E        L  L   
Sbjct: 482 ALSIAYDMVLNGTEIGGGSLRINTLDMQKAVFEA-LGISEA---EAEEKFSFLLNALKYG 537

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            P   G+A G DRL+ML+TG+ +I +VI  P +++ +
Sbjct: 538 APPHGGLAFGLDRLIMLMTGSQSIRDVIAFPKTKTAE 574


>gi|325123420|gb|ADY82943.1| aspartyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 594

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 70/208 (33%), Gaps = 21/208 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R Y  ++ F+++++  L   +P     ++     +      
Sbjct: 134 RRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLVPSRVQNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-SYE 130
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +     E
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLNDDE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +       ++   ++   K           F +   +  +EA   YA+ D         
Sbjct: 248 IMDLMEGMTVKLFNDLLGVK-----------FEKFRRMPYSEAMRDYAS-DKPDLRIPLK 295

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
             D   L  + +         D    I 
Sbjct: 296 LVDVADLMQEVEFKVFAGPAKDPKGRIV 323



 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY-PADPRFT-- 259
           + G  +            +     E     +       +P      +     ++P     
Sbjct: 415 KIGHDLNLSTCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEDVKSNPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS----DEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TGA +I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLVMLMTGATSIRDVIAFPKTKTAE 562


>gi|148825398|ref|YP_001290151.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|166225348|sp|A5UAG7|SYD_HAEIE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148715558|gb|ABQ97768.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 588

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGLWLDTIGVDLG----------KFPVMTWQEAMRRF-GSDKPDLRNPLEI 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWKPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|284048846|ref|YP_003399185.1| aspartyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953067|gb|ADB47870.1| aspartyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 598

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 73/216 (33%), Gaps = 8/216 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +  ++R++  +  F+EI++  L   +P     ++            
Sbjct: 136 RRPEMQQNLILRHQVTKAIRDFLDKQDFLEIETPDLIRSTPEGARDYLVPSRVNPGKFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ F  A  +R+ +     QPEFT L+   +    + 
Sbjct: 196 LPQ------SPQLFKQLLMIAGMERYFQIARCFRDEDLRADRQPEFTQLDMEMSFVDQDD 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                    +     +   R+    +         
Sbjct: 250 IMALTEKLIAYVFKETLGVDVPVPMARMTWDEAMDKYGSDKPDLRFGMQLVNMNGALEGT 309

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
             +    +  +   ++  +   ++ I  R L   +E
Sbjct: 310 QFKVFKDIIEKGGLVKAINVKGYNKIPRRELDGLVE 345



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+       ++ +    + E  E              P  E     +   
Sbjct: 411 ALRLEMGKRLGLIDPDKLCFTWVVKFPMFEYSEEEHRYVAMHHPFTAPCDEDVDKLLTDP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
              + K +++    +E+    + +     Q+  FE           +        L    
Sbjct: 471 GHVYAKAYDMVLNGVEIGGGSERIHREDIQKKVFEAIGLT----DEQAQEKFGFLLKAFE 526

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A G DRLVML+    +I +VI  P SQS  +
Sbjct: 527 FGAPPHGGLAFGLDRLVMLMAKRPSIRDVIAFPKSQSAID 566


>gi|309972523|gb|ADO95724.1| Aspartyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 588

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGLWLDTIGVDLG----------KFPVMTWQEAMCRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWKPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|329123658|ref|ZP_08252218.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327469857|gb|EGF15322.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 518

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 65/184 (35%), Gaps = 20/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +    ++                       +   +T  EA  R+ +   DL   L+  
Sbjct: 245 VREIMERMVHDLWLDTIGVDLG----------KFPVMTWQEAMRRFGSDKPDLRNPLEMV 294

Query: 190 DQPD 193
           D  D
Sbjct: 295 DVAD 298


>gi|307299322|ref|ZP_07579123.1| aspartyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915118|gb|EFN45504.1| aspartyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 588

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 77/208 (37%), Gaps = 6/208 (2%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
              + +  +L R+    ++REY   N F+++++  L + +P      R F     +    
Sbjct: 134 RRPKMQRNILTRHRFVQAVREYLNNNGFVDVETPILGKSTPEGA---RDFLVPSRL--KA 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +    E +
Sbjct: 189 GKFYALPQSPQIFKQLLMVAGFDRYYQIAKCFRDEDFRADRQPEFTQIDLEMSFADEEDV 248

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++ A E A     S            E+    +   RY       T       
Sbjct: 249 FSMTEGLMKYAFEKAASADISTPFRRFTYQEVVEFYGSDKPDTRYGMKIHDITSIFEKTA 308

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
            + +     +   ++    +  +D FSR
Sbjct: 309 FKVISDSIDKGEKVKGFIVENKADRFSR 336



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 6/137 (4%)

Query: 219 SRILIEKIEPNLGINCCTILDRYP-APESALANIYPADPRFTKRFELYACNIELCNACDE 277
              +    E    I         P   +             +K ++L     E+ +    
Sbjct: 430 DFPMFSYNEEEQRIEAEHHPFTMPDLEDLEKYGESDPLKVRSKAYDLVLNGYEIASGSVR 489

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGA 336
           +     Q   F+     ++    E        L       P  +GIA G DR++ ++ GA
Sbjct: 490 IHRRDIQSRVFDLIGLSRE----EATEKFGYLLEAFKYGPPPHAGIAPGLDRIIAIIVGA 545

Query: 337 NNINEVIWTPFSQSNQE 353
            +I EVI  P   S  +
Sbjct: 546 QSIREVIAFPKVASGAD 562


>gi|182420378|ref|ZP_02951600.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237667017|ref|ZP_04527001.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182375744|gb|EDT73342.1| aspartyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655365|gb|EEP52921.1| aspartate--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 599

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +     R+    ++R+Y  E+ F+++++  L + +P     ++          ++
Sbjct: 139 RRPDMQRIFDIRSKTTKAIRDYLEEHNFLDVETPVLGKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 193 PGMFYALPQSPQIYKQLLMMSGFDRYYQIAKCFRDEDLRANRQPEFTQVDMELSFVEQED 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +I    +                    + +T  EA  +Y   D        + 
Sbjct: 253 IMELNEGLIAHVFKKVAGVDVQ---------LPIKRMTFKEAMEKY-GSDKPDLRFGMEI 302

Query: 192 PD 193
            D
Sbjct: 303 TD 304



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 48/153 (31%), Gaps = 9/153 (5%)

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
           L L      I+  ++  ++ +      E  E       C      P  E           
Sbjct: 415 LQLAKDFDLIKDKNEFNFTWVTEFPFFEYSEEEERFKACHHPFTAPMDEDLEFVESDPGR 474

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--TYPIDEDFLACLT 314
             +K ++L     EL      + D   Q          +   + E   +      L  L 
Sbjct: 475 VRSKAYDLVLNGEELGGGSIRIHDTAIQERML------RALGFTEERAWESFGFLLQALK 528

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DR++M + G  NI +VI  P
Sbjct: 529 FGAPPHGGLAFGLDRMIMFLAGTENIKDVIAFP 561


>gi|114565516|ref|XP_001150083.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 4
           [Pan troglodytes]
          Length = 586

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 99/367 (26%), Gaps = 49/367 (13%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHI-------------------- 59
           L  R+ +   +REY    + F++I++ +L + +PG +  +                    
Sbjct: 187 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGIDIEMSFVDQTGIQSLIEGLLQYSW 246

Query: 60  ----RAFSTEL-IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQ 114
                        +        Y    P+      +    +        +        H 
Sbjct: 247 PNDKDPVVVPFPTMTFAEALATYGTDKPDTRFGMKIIDISDVFRNTEIGFLQDALSKPHG 306

Query: 115 PEFTMLEWYRAHE----SYEQLMKDCMNIIRCAAEVA----NQKIFSFQNVNCNPFSEPE 166
               +     A        E + K   +             N+   S            E
Sbjct: 307 TVKAICIPEGAKYLKRKDIESIRKFAADHFNQEILPVFLNANRNWNSPVANFIMESQRLE 366

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIE 224
            I + E       +      +        L    A     R  V  D T       +   
Sbjct: 367 LIRLMETQEEDVVLLTAGEHNKACSLLGKLRLECADLLETRGVVLRDPTLFSFLWVVDFP 426

Query: 225 KIEPNLGINCCTILDRYPAPESALANIY----PADPRFTKRFELYACNIELCNACDELLD 280
              P            +P      ++I+          ++ ++L     E+      + +
Sbjct: 427 LFLPKEENPRELESAHHPFTAPHPSDIHLLYTEPKKARSQHYDLVLNGNEIGGGSIRIHN 486

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
              QR+     ++       E   +    L  L    P   GIA+G DRL+ LVTG+ +I
Sbjct: 487 AELQRYILATLLK-------EDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSRSI 539

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 540 RDVIAFP 546


>gi|312134504|ref|YP_004001842.1| aspartyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774555|gb|ADQ04042.1| aspartyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 594

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +   +R +  +N FIEI++  L   +P     ++            
Sbjct: 140 RRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLVPSRIFPGKFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 200 LPQ------SPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQPEFTQIDIEMSFVDVDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +++                        E     +   R+  ++L    D    
Sbjct: 254 VIEINEKLLQTIFGEMLGIDLKLPLPRLTYKEAMERFGSDKPDTRF-GMELVNLTDVAKN 312

Query: 192 PDRHLLYLQAQQAG 205
            +  +    A + G
Sbjct: 313 CEFKVFADAANKGG 326



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 47/154 (30%), Gaps = 9/154 (5%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++  +          +    L E  E              P  E             
Sbjct: 418 EIARKLNLLDKSKFNLLWVTEFPLFEYSEEEGRYVAKHHPFTSPMDEDIEFLETDPAKVR 477

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACLT-E 315
           +K +++     E+      +  P  Q+  F      K   + E    D     L      
Sbjct: 478 SKAYDIVLNGTEIGGGSIRIHSPEIQKRMF------KALGFTEEKAQDRFGFLLEAFKFG 531

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            P   GIA GFDRL ML+ G ++I + I  P  +
Sbjct: 532 TPPHGGIAYGFDRLCMLLLGLDSIRDTIAFPKVK 565


>gi|302871213|ref|YP_003839849.1| aspartyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574072|gb|ADL41863.1| aspartyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 594

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +   +R +  +N FIEI++  L   +P     ++            
Sbjct: 140 RRPDMQKNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLVPSRIFPGKFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 200 LPQ------SPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQPEFTQIDIEMSFVDVDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +++                        E     +   R+  ++L    D    
Sbjct: 254 VIEINERLLQTIFGEMLGIDLKLPLPRLTYKEAMERFGSDKPDTRF-GMELVNLTDIAKN 312

Query: 192 PDRHLLYLQAQQAG 205
            +  +    A + G
Sbjct: 313 CEFKVFADAANKGG 326



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 46/154 (29%), Gaps = 9/154 (5%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++  +          +    L E  E              P  E             
Sbjct: 418 EIARKLNLLDKSKFNLLWVTEFPLFEYSEEEGRYVAKHHPFTSPMDEDIEFLETDPAKVR 477

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TE 315
           +K +++     E+      +     Q+  F      K   + E    D     L      
Sbjct: 478 SKAYDIVLNGTEIGGGSIRIHSTELQKRMF------KALGFTEERAQDRFGFLLEAFKYG 531

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            P   GIA GFDRL ML+ G ++I + I  P  +
Sbjct: 532 TPPHGGIAYGFDRLCMLLLGLDSIRDTIAFPKVK 565


>gi|207344772|gb|EDZ71801.1| YHR019Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 297

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 104/324 (32%), Gaps = 39/324 (12%)

Query: 29  QSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSC 86
             S+R  + E    E+    +      G  T        L   ++  +  YL  S +   
Sbjct: 1   LKSVRRVYDEEHLTEVTPPCMVQTQVEGGST--------LFKMNYYGEEAYLTQSSQLYL 52

Query: 87  KKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
           +  L A    ++    ++R  +     H  E+T +E   A  +++ L++    +I  + +
Sbjct: 53  ETCL-ASLGDVYTIQESFRAEKSHTRRHLSEYTHIEAELAFLTFDDLLQHIETLIVKSVQ 111

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
              +   +   V       P +      F R    D  T L+  D  +            
Sbjct: 112 YVLEDPIAGPLVKQLN---PNFKAPKAPFMRLQYKDAITWLNEHDIKNEE---------- 158

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFEL 264
                D  + D  +     K+   +G+     L R+P    S        DPR T+  ++
Sbjct: 159 ---GEDFKFGDDIAEAAERKMTDTIGV--PIFLTRFPVEIKSFYMKRCSDDPRVTESVDV 213

Query: 265 YACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIA 323
              N+         +D +++         +++ I  + Y     F+           G  
Sbjct: 214 LMPNVGEITGGSMRIDDMDEL----MAGFKREGIDTDAYY---WFIDQRKYGTCPHGGYG 266

Query: 324 MGFDRLVMLVTGANNINEVIWTPF 347
           +G +R++  +     + +    P 
Sbjct: 267 IGTERILAWLCDRFTVRDCSLYPR 290


>gi|329296282|ref|ZP_08253618.1| aspartyl-tRNA synthetase [Plautia stali symbiont]
          Length = 593

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +     F++I++  L   +P     ++            
Sbjct: 130 RRPEMAQRLKNRARITSFVRRFMDGEGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S EQ
Sbjct: 190 LPQ------SPQLFKQLLMISGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMSAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR            + ++      +   +T AEA  RY   D     +  + 
Sbjct: 244 VRSVMERMIREL----------WLDIKGIDLGDFPQMTFAEAMNRY-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLLKSVEFQVFAGPANDPKGRV 318



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 52/150 (34%), Gaps = 18/150 (12%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            +++ +D  W+ ++        E    G+         P   +A              ++
Sbjct: 416 DLQITNDKAWAPLWVVDFPMFEEDDEGGLAAMHHPFTSPKALTAEQLAADPTQAVANAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACLT-EM 316
           +     E+      +     Q+  F      E+E +EK              L  L    
Sbjct: 476 MVINGYEVGGGSVRIHSGNMQQTVFSILGISEEEQREKFG----------FLLDALKFGT 525

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P  +G+A G DRL ML+T  +NI +VI  P
Sbjct: 526 PPHAGLAFGLDRLTMLLTDTDNIRDVIAFP 555


>gi|297529264|ref|YP_003670539.1| aspartyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252516|gb|ADI25962.1| aspartyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 590

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 27/201 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R            L  R+ I  ++R++    +F+EI++  L   +P     ++ 
Sbjct: 123 DVRLKYRYLDLRRPVMFQTLALRHKITKTVRDFLDSERFLEIETPMLTKSTPEGARDYLV 182

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 183 PSRVHPGEFYALPQ------SPQIFKQLLMVGGVERYYQIARCFRDEDLRADRQPEFTQI 236

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    E ++     ++    + A                    IT  EA +RY + 
Sbjct: 237 DIEMSFIEQEDIIDLTERMMAAVVKAAKGIDIP---------RPFPRITYDEAMSRYGSD 287

Query: 181 DLGTTLDNPDQPDRHLLYLQA 201
                          ++   A
Sbjct: 288 KPDIRFGLELVDVSEIVRDSA 308



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 53/175 (30%), Gaps = 17/175 (9%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL   + +        L     + G  +   D     F  +    +              
Sbjct: 390 DLLLFVADEKAIVAAALGALRLKLGKELGLIDEAKLAFLWVTDWPLLEYDEEEGRYYAAH 449

Query: 241 YPAPESALANIY--PADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEK----EM 292
           +P       +I     +P     + ++L     EL      + +   Q   F      E 
Sbjct: 450 HPFTMPVRDDIPLLETNPGAVRAQAYDLVLNGYELGGGSLRIFERDVQEKMFRALGFSEE 509

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + +++            L       P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 510 EARRQFG--------FLLEAFEYGTPPHGGIALGLDRLVMLLAGRMNLRDTIAFP 556


>gi|285019195|ref|YP_003376906.1| aspartyl tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283474413|emb|CBA16914.1| putative aspartyl trna synthetase protein [Xanthomonas albilineans]
          Length = 583

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 72/229 (31%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR Y  E  F +I++  L 
Sbjct: 105 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRYLDERGFQDIETPILT 164

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 165 KATPEG---ARDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 218

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +      ++R   +                      +
Sbjct: 219 LRADRQLEFTQLDMEFAFVRERDVQDFVEAMVRTIFKDVVDVELDAG---------FPRM 269

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D      + +  D          A    A +D    +
Sbjct: 270 TWAEAMRRY-GSDKPDLRIDLELVDVAEQVKACDFAAFSSAANDPDGRV 317



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    +A       +    + E  E              PA +        A 
Sbjct: 403 ALRLKAGKDFGLIAVGWRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIATLRAHAK 462

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 463 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 518

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 519 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 550


>gi|309791721|ref|ZP_07686211.1| aspartyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226214|gb|EFO79952.1| aspartyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 586

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 64/172 (37%), Gaps = 16/172 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R +  ++ R+ +   +R++     F+EI++  L   +P     ++            
Sbjct: 133 RRERMQRNMILRHRVIKFMRDFLDAEGFLEIETPILIKSTPEGARDYLVPSRVHPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K F  A  +R+ +Q    QPEFT L+   +      
Sbjct: 193 LPQ------SPQQLKQLLMVAGYDKYFQVARCFRDEDQRADRQPEFTQLDMEMSFV---- 242

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
                   +    E    ++ +    +    +    ++ AEA  RY +    
Sbjct: 243 ----EQEDVISLIERLFTQLCAAVVPHKRVLTPFPRLSYAEAMERYGSDKPD 290



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 50/161 (31%), Gaps = 7/161 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L  L A++  +       +S +    L++        +        P  E         
Sbjct: 409 KLRRLFAERLNLADPDLLHFSWVLDFPLLDWNPDENRWDAVHHPFTAPHAEDQPLLASDP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                + ++L     E+      +     Q+  FE        I  E         L   
Sbjct: 469 AKVRAQAYDLVLNGYEVGGGSIRIHRRDVQQRIFE-----LLGISEETAQSQFGHMLEAF 523

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   GIA G DR+VML+   + I EV+  P +Q   +
Sbjct: 524 EYGAPPHGGIAPGIDRIVMLLADESTIREVMAFPKTQQAAD 564


>gi|117924249|ref|YP_864866.1| aspartyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|166225354|sp|A0L667|SYD_MAGSM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|117608005|gb|ABK43460.1| aspartyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 607

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ I  S+R++   + F+E+++  L   +P     ++            
Sbjct: 132 RRPDMQRNLMFRHRIMQSVRKHLDGSGFVEVETPMLTRSTPEGARDYLVPSRVNPGDFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +      
Sbjct: 192 LPQ------SPQLFKQLLMMAGYDRYFQIVRCFRDEDLRADRQPEFTQIDLEMSFVEPND 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+   +++  A + A                    IT AEA  +Y  +D        + 
Sbjct: 246 VMELTESVVVEAFKEALGVSIP---------QPVRRITYAEAMDKY-GLDAPDMRITMEL 295

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 296 KDLTEVMK 303



 Score = 88.9 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 5/154 (3%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           + L  L  ++       D    D  +         +           Y       +  +P
Sbjct: 422 KELEMLCDEKFAFVWVTDFPLLDWDNEARRNTAVHHPFTAPHPDDIIYLENADGASVEHP 481

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
            +   +  ++L     E+      + D + QR   E     +++   +        L  L
Sbjct: 482 LEKVRSLAYDLVLNGTEVGGGSIRIHDTMLQRRMLELLEIGEEEAEGK----FGFLLRAL 537

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A+G DRLV L+ G ++I +VI  P
Sbjct: 538 QYGAPPHGGLALGLDRLVTLMLGLDSIRDVIAFP 571


>gi|262276116|ref|ZP_06053925.1| aspartyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262219924|gb|EEY71240.1| aspartyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 595

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 72/213 (33%), Gaps = 19/213 (8%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +           +  R    S +R +  +N F++I++  L   +P     ++     
Sbjct: 123 KHRYLDLRRPEMSDRIKMRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRV 182

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   
Sbjct: 183 HKGSFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIET 236

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +  S EQ+ +    ++R            +Q +          +T  EA  R+   D   
Sbjct: 237 SFMSAEQVREVTERMVREM----------WQELLNVDLGAFPTMTFEEAMRRF-GSDKPD 285

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +  +  D   L    +        +D    +
Sbjct: 286 LRNPLEMVDVADLLKDVEFKVFSGPANDPKGRV 318



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 49/136 (36%), Gaps = 8/136 (5%)

Query: 214 WSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
           W+ ++        E + G ++        P   S            +  +++     E+ 
Sbjct: 425 WAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLNVSPEELKANPQNVNSNAYDMVLNGYEVG 484

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL-TEMPQSSGIAMGFDRLV 330
                + +P  Q   F+        I  E   +   FL   L    P  +G+A G DRLV
Sbjct: 485 GGSVRIHNPEMQTAVFD-----LLGIDAEEQQVKFGFLLEALKYGTPPHAGLAFGLDRLV 539

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  NI +VI  P
Sbjct: 540 MLLCGTENIRDVIAFP 555


>gi|148827469|ref|YP_001292222.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166225349|sp|A5UGD3|SYD_HAEIG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148718711|gb|ABQ99838.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 588

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGLWLDTIGVDLG----------KFPVMTWQEAMCRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|323704146|ref|ZP_08115725.1| aspartyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323536212|gb|EGB25984.1| aspartyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 593

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 29/247 (11%), Positives = 76/247 (30%), Gaps = 13/247 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I   +R++  +N FI+I++  L   +P     ++     +      
Sbjct: 141 RRPSMQKILITRYKITRIVRDFLDKNGFIDIETPLLIKSTPEGARDYLVPSRVQPGKFFA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A   R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIFKQLLMISGFDRYYQIAKCLRDEDLRADRQPEFTQIDIEMSFVDEDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I    +              +     +     +   R+       +    D 
Sbjct: 255 VISINERMIAKIFKEILNIDLEVPFRRISWQEAMDRFGSDKPDLRFGMELKNLSSIFADS 314

Query: 192 PDRHLLYLQA-----QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
             +            +   ++ A       +   +   K     G+    + D  P  + 
Sbjct: 315 EFKVFRDAIENGGSVRAINVKGAASIPRRQLDELVEYVKTYKAKGLVWIQMSDDGPKSQI 374

Query: 247 ALANIYP 253
           +      
Sbjct: 375 SKFLKED 381



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 17/163 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL     ++  +   +   +  +    L+E  E              P  E         
Sbjct: 415 HLRLEMGRRYNLIDENKYEFLWVVDFPLLEYSEEEKRYVAMHHPFTAPKDEDIEMLDKNP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                K +++    +E+      + D   Q+  F+      ++ + +             
Sbjct: 475 GQVRAKAYDIVLNGMEIGGGSIRIHDTELQKKMFKVLGFNDEDAEARFG----------F 524

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L       P   GIA G DRL M++TG +NI +VI  P +Q+
Sbjct: 525 LLNAFKYGAPPHGGIAYGLDRLTMILTGTDNIRDVIAFPKTQN 567


>gi|295112123|emb|CBL28873.1| aspartyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 608

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 68/190 (35%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R +  L  R+ I +  R Y     F+E+++  L   +P     ++            
Sbjct: 152 RRERMQNNLRTRSRINAFTRRYLEGQGFVELETPILTKATPEGARDYLVPSRVTPGTFYA 211

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   ++     
Sbjct: 212 LPQ------SPQLFKQILMVSGFDRYYQIARCFRDEDLRADRQPEFTQVDIEMSYV---- 261

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +  D M +I    +   +++                +   +A  RY   D        + 
Sbjct: 262 VEDDVMELIEGYMKGLFKEVLGVDVPT-----PFGRMLYWDAMDRY-GSDKPDLRVTLEL 315

Query: 192 PDRHLLYLQA 201
            D   ++ +A
Sbjct: 316 CDVASVFAKA 325



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 45/133 (33%), Gaps = 18/133 (13%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +     E    +            E  L    P+     + ++      E+      + D
Sbjct: 453 LFEWSDEEKRWVAMHHPFTSPVLEEGDLMERDPSKA-LARAYDCVLNGNEVGGGSIRIHD 511

Query: 281 PIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLV 333
           P  Q   F+      +E + +             FL  L    P   GIA+G DRLVML+
Sbjct: 512 PEVQARLFKCLGISPEEAKRRFG----------FFLNALSYGTPPHGGIALGVDRLVMLL 561

Query: 334 TGANNINEVIWTP 346
            G  +I +V+  P
Sbjct: 562 CGGQSIRDVMTFP 574


>gi|159026019|emb|CAO86273.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 595

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 69/189 (36%), Gaps = 19/189 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +   +R +   E  FIE+++  L   +P     ++           
Sbjct: 136 RRERMSQNLQLRHQVVKEMRRFLEDEQHFIEVETPILTRSTPEGARDYLVPSRVNPGQWY 195

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S  
Sbjct: 196 ALPQ------SPQLFKQLLMVSGMDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFLSLS 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++     +I    +            N +       +T AEA  RY  +D   T    +
Sbjct: 250 EILALNEALIAHIFKKV---------KNIDISLPLPRLTYAEAMDRY-GVDRPDTRFGLE 299

Query: 191 QPDRHLLYL 199
             +   ++ 
Sbjct: 300 LVNVAEIFA 308



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 35/108 (32%), Gaps = 5/108 (4%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P       ++          +++    IE+      +     Q   F           
Sbjct: 458 HHPFTAPNPEDLDDLAHARALAYDMIFNGIEIGGGSLRIYQREVQEKVF----ATIGLSP 513

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E Y      L       P   GIA G DRLVML+ G  +I +VI  P
Sbjct: 514 EEAYNKFGFLLEAFEYGTPPHGGIAYGLDRLVMLLAGEESIRDVIAFP 561


>gi|260548803|ref|ZP_05823025.1| aspartyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260407971|gb|EEX01442.1| aspartyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 594

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 70/207 (33%), Gaps = 21/207 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R Y  ++ F+++++  L   +P     ++     +      
Sbjct: 134 RRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLVPSRVQNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-SYE 130
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +     E
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLNDDE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +       ++   ++   K           F +   +  +EA   YA+ D         
Sbjct: 248 IMDLMEGMTVKLFNDLLGVK-----------FEKFRRMPYSEAMRDYAS-DKPDLRIPLK 295

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             D   L  + +         D    I
Sbjct: 296 LVDVADLMQEVEFKVFAGPAKDPKGRI 322



 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY-PADPRFT-- 259
           + G  +            +     E     +       +P      +     ++P     
Sbjct: 415 KIGHDLNLATCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEDVKSNPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS----DEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TGA +I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLVMLMTGATSIRDVIAFPKTKTAE 562


>gi|239501692|ref|ZP_04661002.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 592

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 70/207 (33%), Gaps = 21/207 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R Y  ++ F+++++  L   +P     ++     +      
Sbjct: 134 RRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLVPSRVQNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-SYE 130
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +     +
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLNDDD 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +       ++   ++   K           F +   +  +EA   YA+ D         
Sbjct: 248 IMDLMEGMTVKLFNDLLGVK-----------FEKFRRMPYSEAMRDYAS-DKPDLRIPLK 295

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             D   L  + +         D    I
Sbjct: 296 LVDVADLMQEVEFKVFAGPAKDPKGRI 322



 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KIGHDLNLATCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEDVKSNPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS----DEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TGA +I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLVMLMTGATSIRDVIAFPKTKTAE 562


>gi|145636549|ref|ZP_01792217.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145270374|gb|EDK10309.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 588

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGLWLDTIGVDLG----------KFPVMTWQEAMRRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKNVEFKVFNEPANNPNGRV 319



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ +              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFERDDEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|69250885|ref|ZP_00605183.1| tRNA synthetase, class II (D, K and N) [Enterococcus faecium DO]
 gi|68193905|gb|EAN08485.1| tRNA synthetase, class II (D, K and N) [Enterococcus faecium DO]
          Length = 204

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
            R F T     + +   LYL+ + E   K+L+  G EK++     +RN      H PEFT
Sbjct: 1   ARPFITH---HNALDIDLYLRIALELHLKRLIVGGMEKVYEIGRVFRNEGIDTTHNPEFT 57

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           MLE Y A+  +  +M     IIR AA +V      ++     +  S+ + I + +A    
Sbjct: 58  MLEAYTAYTDFNDVMNLTEGIIRNAAEKVLGTAKITYDGQAVDLESDFKRIHMVDAIKEQ 117

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE-----PNLGI 232
             +D    +              A++  + V        + +      +E     P  GI
Sbjct: 118 TGVDFWQEMT------LEEALALAEKHNVEVTEAMGVGHVINEFFETFVEETLTQPTFGI 171

Query: 233 NCCTILDRYPAPESALANIYP 253
              +    +   +S  ++I+ 
Sbjct: 172 RTSSRSFAFSEEKSRRSSIHR 192


>gi|289432555|ref|YP_003462428.1| aspartyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946275|gb|ADC73972.1| aspartyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 598

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 15/181 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +RE+  +  FIEI++  L   +P      R +     +    
Sbjct: 133 RRQGMKNNLIIRHKAVRFMREFLNDQGFIEIETPILIKSTPEG---ARDYLVPSRLF--P 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ AG EK +  A  +R+ +     QPEFT L+   +    E +
Sbjct: 188 GKFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQPEFTQLDMEMSFVDEEDM 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           MK   ++                  +     +   I+ A+A  +Y   D        +  
Sbjct: 248 MKLMEDLFTGLVASV--------RPDMKYNKKFPRISFADAMEKY-GCDKPDLRFGMELA 298

Query: 193 D 193
           D
Sbjct: 299 D 299



 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A +  +   ++ +++ +    L +  E     +        P    +   +   
Sbjct: 417 EMRNQLAVKLNLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLE--SDMPLMDT 474

Query: 255 DPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF--- 309
           DP    ++ +++     E+      +     QR  F           +E   IDE F   
Sbjct: 475 DPGRVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFH-----LLGYNDE--QIDERFGHL 527

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L       P   G+A G DR VML+ G  +I EVI  P +Q+ Q+
Sbjct: 528 LEAFEFGAPPHGGVAPGIDRFVMLLAGETSIREVISFPKNQAAQD 572


>gi|163802053|ref|ZP_02195949.1| aspartyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159174194|gb|EDP59002.1| aspartyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 592

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R            +Q +      E   +  +EA  R+   D     +  + 
Sbjct: 244 VRATTEKMVREM----------WQELLNVDLGEFPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 18/151 (11%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  + TW+ ++        E + G ++        P   SA           +  +
Sbjct: 415 KDLGLTKEGTWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVSAEELKANPAAANSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT-E 315
           ++     E+      + +   Q   F+      +E Q K              L  L   
Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFG----------FLLDALKFG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|153832460|ref|ZP_01985127.1| aspartyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148871255|gb|EDL70127.1| aspartyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 592

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R            +Q +      E   +  +EA  R+   D     +  + 
Sbjct: 244 VRATTEKMVREM----------WQELLNVDLGEFPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 18/151 (11%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  + TW+ ++        E + G ++        P   +A           +  +
Sbjct: 415 KDLGLTKEGTWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT-E 315
           ++     E+      + +   Q   F+      +E Q K              L  L   
Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFG----------FLLDALKFG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|91203210|emb|CAJ72849.1| strongly similar to aspartyl-tRNA ligase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 587

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +  ++REYF    FI+I++  L   +P     ++            
Sbjct: 137 RRSEMQTHLIFRHKVCQTIREYFNTRGFIDIETPVLTKSTPEGARDYLVPSRVNHGKVYA 196

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +      
Sbjct: 197 LPQ------SPQLFKQVLMVSGFDRYFQIVRCFRDEDLRAQRQPEFTQIDMEMSFVDEAD 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +I    E    K  +              +   E+ A Y   D          
Sbjct: 251 IIQVIEGLIAAIFEKVVGKPVN---------LPFPRLLYQESMASY-GCDAPDLRFGMRI 300

Query: 192 PD 193
            D
Sbjct: 301 HD 302



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 50/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL      +  +  A +  +  I    L E  E              P  E         
Sbjct: 410 HLRTHLGHKNNLINAEEFNFVWIVDFPLFEYNEDAKRYVALHHPFTSPRSEDIPFLEEKP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +EL      +  P  Q+  F    +      N+ Y      L  L 
Sbjct: 470 LEVRARAYDLVLNGVELGGGSIRIHSPEIQKRVF----RLLGINDNDAYQKFGFLLDALK 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DR++ L+   ++I EVI  P
Sbjct: 526 FGAPPHGGIALGIDRMIALLLHLDDIREVIAFP 558


>gi|34558088|ref|NP_907903.1| aspartyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|46577163|sp|Q7M8A6|SYD_WOLSU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|34483806|emb|CAE10803.1| ASPARTYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 587

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 63/200 (31%), Gaps = 18/200 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            + +       R+    + R       F+E+++  L   +P     ++            
Sbjct: 135 RNPKAYDTFRLRSKAAIAARNSLDGMGFLEVETPILTKATPEGARDYLVPSRVHPGEFFA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 195 LPQ------SPQLFKQLLMISGFDRYFQIAKCFRDEDLRADRQPEFTQIDVEMSFCDQED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++          I               ++T   A   Y +       + P  
Sbjct: 249 VMGVAEKLLGDIFSACGHTIPEH----------FPHLTYDRAMEEYGSDKPDLRFEMPLV 298

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
               L      +   ++A D
Sbjct: 299 EVIDLFGDSNNEIFAKIAQD 318



 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 56/153 (36%), Gaps = 11/153 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q G+   +   +  + +  + EK E  +          +P       +    
Sbjct: 410 RLRLEVAKQMGLIDPNQLCFLWVVNFPMFEKDEGKVKAL------HHPFTMPKNLDCEDV 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           +   +  +++    +EL      +     Q+  F+           E     +  L  L 
Sbjct: 464 EEISSIAYDVVLNGVELGGGSIRIHQEAIQKRVFDLLGIA----PEEAQEKFDFLLEALK 519

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G A+GFDRL+ML+T + +I +VI  P
Sbjct: 520 FGAPPHGGFAIGFDRLIMLLTQSPSIRDVIAFP 552


>gi|325982635|ref|YP_004295037.1| aspartyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532154|gb|ADZ26875.1| aspartyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 595

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 85/247 (34%), Gaps = 23/247 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +        +  L  R+ +  ++R +  ++ F++I++  L   +P     ++     
Sbjct: 124 EHRYLDLRRPAMQSNLRLRHKVAMAVRVFLDQHGFLDIETPMLTKSTPEGARDYLVPSRV 183

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   
Sbjct: 184 NAGHFFALPQ------SPQLFKQLLMVSGFDRYYQITRCFRDEDLRADRQPEFTQIDIET 237

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +  S  ++M     +IR   +  +         N +  +    +T AEA  +Y   D   
Sbjct: 238 SFLSENEIMSLMEEMIRGLFKNVS---------NVDLPNPFPRLTYAEAMFKY-GSDKPD 287

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
                +  +   +  +      R A +     +          PN G      +D Y A 
Sbjct: 288 LRIPLEFTELTDIMKEVPFKVFREAAEKPDGRV-----AALRVPNGGELSRKEIDDYTAF 342

Query: 245 ESALANI 251
            +     
Sbjct: 343 VAIYGAK 349



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 41/141 (29%), Gaps = 5/141 (3%)

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
               +     +    + E+ E              PA               +K +++  
Sbjct: 421 HAEAEWKPLWVVDFPMFERDEEENRWQALHHPFTSPADGHEDLLETDPGQALSKAYDMVL 480

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMG 325
              E+      +     Q   F            E        L  L    P   GIA G
Sbjct: 481 NGSEIGGGSVRIHRQDVQSKVFRALNIS----EQEAQEKFGFLLQALQYGAPPHGGIAFG 536

Query: 326 FDRLVMLVTGANNINEVIWTP 346
            DR++ ++TG+ +I +VI  P
Sbjct: 537 LDRILTMMTGSESIRDVIAFP 557


>gi|169794766|ref|YP_001712559.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|184159464|ref|YP_001847803.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213157906|ref|YP_002320704.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215482310|ref|YP_002324492.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|260557129|ref|ZP_05829345.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|301347109|ref|ZP_07227850.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301510404|ref|ZP_07235641.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301597043|ref|ZP_07242051.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332852216|ref|ZP_08434021.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332870438|ref|ZP_08439202.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332876305|ref|ZP_08444080.1| aspartate--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|226735095|sp|B7GWN1|SYD_ACIB3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226735096|sp|B7I8M5|SYD_ACIB5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238688027|sp|B0V550|SYD_ACIBY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238690995|sp|B2HYL7|SYD_ACIBC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169147693|emb|CAM85556.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|183211058|gb|ACC58456.1| Aspartyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213057066|gb|ACJ41968.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213986159|gb|ACJ56458.1| aspartyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|260409235|gb|EEX02537.1| aspartyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|322509377|gb|ADX04831.1| aspS [Acinetobacter baumannii 1656-2]
 gi|323519401|gb|ADX93782.1| aspartyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332729346|gb|EGJ60686.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332732175|gb|EGJ63443.1| aspartate--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332735577|gb|EGJ66629.1| aspartate--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 592

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 70/207 (33%), Gaps = 21/207 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R Y  ++ F+++++  L   +P     ++     +      
Sbjct: 134 RRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLVPSRVQNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-SYE 130
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +     +
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLNDDD 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +       ++   ++   K           F +   +  +EA   YA+ D         
Sbjct: 248 IMDLMEGMTVKLFNDLLGVK-----------FEKFRRMPYSEAMRDYAS-DKPDLRIPLK 295

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             D   L  + +         D    I
Sbjct: 296 LVDVADLMQEVEFKVFAGPAKDPKGRI 322



 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KIGHDLNLATCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEDVKSNPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS----DEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TGA +I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLVMLMTGATSIRDVIAFPKTKTAE 562


>gi|260768190|ref|ZP_05877124.1| aspartyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260616220|gb|EEX41405.1| aspartyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|315179891|gb|ADT86805.1| aspartyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 591

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 66/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVPSRVHKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPVMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  +          +D    +
Sbjct: 293 VDVADLLKEVDFKVFSGPANDEKGRV 318



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 46/153 (30%), Gaps = 6/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  I          +    + E  +              P   S        
Sbjct: 408 ALRLKVGKELNITNESTWAPLWVVDFPMFESDDEGNVAAMHHPFTS-PLNMSPEELKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           +   +  +++     E+      + D   Q   F+    +      E        L  L 
Sbjct: 467 EGALSNAYDMVLNGYEVGGGSVRIHDATMQAAVFDLLGIDAA----EQQLKFGFLLDALK 522

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 523 FGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|255018292|ref|ZP_05290418.1| lysyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 232

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 17/93 (18%)

Query: 1   MHQIPSQPWWNRDF--HYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D    YR+R              + R+ I    R+Y     F+E+++ 
Sbjct: 144 LRPLPDKYHGLKDVEQRYRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETP 203

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
            L    G     + F T     + +   LYL+ 
Sbjct: 204 VLHTIAGGAA-AKPFITH---HNALDMELYLRI 232


>gi|145608522|ref|XP_370051.2| hypothetical protein MGG_06566 [Magnaporthe oryzae 70-15]
 gi|145015992|gb|EDK00482.1| hypothetical protein MGG_06566 [Magnaporthe oryzae 70-15]
          Length = 515

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 51/346 (14%), Positives = 98/346 (28%), Gaps = 52/346 (15%)

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-C 111
           P ++  I     +   Q       YL  S +    + LA     ++  +  +R  +    
Sbjct: 164 PASDGQISTEGVQKSTQPFFDSQKYLTVSAQLHL-EALAQSVGNVWTLSPTFRAEKSDTP 222

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNII-RCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
            H  EF M+E   +       + D +  + R A +  +         + +     +  T 
Sbjct: 223 RHLSEFYMMEAEMSFVESMDTVMDLVEDLLRFATKELSSTKLFEDLQHRSKEGADDLTTP 282

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
            E  +R+  +   +           LL  ++Q           W         + I   +
Sbjct: 283 EEVRSRWNGLMADSWPRITYSDAIRLLESESQDRPDMFNFKPIWGHGLQAEHEKYIARVV 342

Query: 231 GINCCTILDRYPAPESALAN-------------------IYPADPRFTKRFELYACNIEL 271
           G      +  YP    A                         +DP  T   E   C   L
Sbjct: 343 GGGKPVFVTHYPRDLKAFYMLQSASATGKAGTSASFSAGTSRSDPEATTLRETVDCFDLL 402

Query: 272 CNACDELLDPIEQRHRFE-----KEMQ-------------EKKKIYNETYPI----DEDF 309
                E+     + HR +      + +                +   ++ P+    D   
Sbjct: 403 VPDLCEIAGGSMREHRLQPLLGVMQSRGMVPQVSDVGSSSLASRGDGDSDPVSNTTDAQH 462

Query: 310 LACLT--------EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              L           P   G  +GFDRL+  ++G  +I +++  P 
Sbjct: 463 AGALDWYVDLRRWGCPPHGGFGIGFDRLLCYLSGVQSIRDIVAFPR 508


>gi|217032014|ref|ZP_03437515.1| hypothetical protein HPB128_187g41 [Helicobacter pylori B128]
 gi|216946324|gb|EEC24930.1| hypothetical protein HPB128_187g41 [Helicobacter pylori B128]
          Length = 492

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 65/219 (29%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 117 NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNALAQKGFLEIETPILSKTTPEGARDY 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT
Sbjct: 177 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      +M    ++++   +                    + +   EA   Y 
Sbjct: 231 QIDAEMSFCDENDVMGVVEDLLQAIFKAIGHD----------ISKPFKRMPYKEAMENYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +       + P           +      +A D     I
Sbjct: 281 SDKPDLRFELPLIEVGDCFRDSSNAIFSNIAQDPKNKRI 319


>gi|78043789|ref|YP_361017.1| aspartyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|97196601|sp|Q3AA17|SYD_CARHZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77995904|gb|ABB14803.1| aspartyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 592

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L  R+    ++R++   + F EI++  L   +P      R F     +    
Sbjct: 135 RRPEMQRALELRHKAAKAVRDFLDRHGFWEIETPMLTKSTPEG---ARDFLVPSRLN--P 189

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ AG E+ F     +R+ +     QPEFT ++   +    E +
Sbjct: 190 GKFYALPQSPQIFKQILMVAGMERYFQIVRCFRDEDLRADRQPEFTQIDIEMSFIDREDI 249

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    + A               +  + I+  EA  +Y   D        +  
Sbjct: 250 MSLMEEMIAYVFKEAIGVEVK---------TPFKRISYQEAMLKY-GTDKPDLRFGLEIT 299

Query: 193 DRHLLYL 199
           D   L  
Sbjct: 300 DVTELVK 306



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 15/160 (9%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+   ++  +  +    L+E                 P  E              
Sbjct: 413 LAERLGLIPENEFNFLWVIDFPLLEYDNEEKRFVAMHHPFTAPMDEDLPLMDENPLLVRA 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL 313
           K +++    +E+      +     Q   F      E+E +EK     E +          
Sbjct: 473 KAYDMVLNGVEIGGGSIRIHRRDIQEKMFKLIGLSEEEAKEKFGFMLEAFE--------- 523

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA GFDRLVML+ G  +I +VI  P +QS  +
Sbjct: 524 YGTPPHGGIAFGFDRLVMLMAGRESIRDVIAFPKTQSATD 563


>gi|254525854|ref|ZP_05137906.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537278|gb|EEE39731.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 598

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 67/192 (34%), Gaps = 26/192 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L  R+ I    RE+     F E+++  L   +P      R 
Sbjct: 125 ELRLKYRYLDLRRGKLLENLKTRHKIIKVAREFLDNFGFTEVETPLLTKSTPEG---ARD 181

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     + +   +   L  SP+   + L+  G +K +  A  +R+ +     QPEFT L+
Sbjct: 182 FLVPARLSN--GEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQPEFTQLD 239

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  S E+++    ++I+   +            N N  +    ++   A   Y   D
Sbjct: 240 IEMSFVSEEEIISFNESLIKKIWKEVL---------NINFNNAFPRMSWQAAMDNY-GTD 289

Query: 182 LGTTLDNPDQPD 193
              T       D
Sbjct: 290 RPDTRYQMLLKD 301



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 49/154 (31%), Gaps = 14/154 (9%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL---ANIYPADP 256
            A+   +       +  +    + E+ E              P    +          + 
Sbjct: 420 IAKDLNLIDKSKWNFLWVTDFPMFERNEDENRYEALHHPFCSPKNIKSKGSDKMQKEIEN 479

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL 313
                ++L    +EL      + +   Q+   +        +      IDE F   +  L
Sbjct: 480 SIANAYDLVLNGMELGGGSLRIHEANLQKEVLKT-------VGLTDKEIDEKFGFLIEAL 532

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA G DR+ ML+ GA++I E I  P
Sbjct: 533 EMGAPPHGGIAFGLDRITMLLIGADSIRETIAFP 566


>gi|76156228|gb|AAX27451.2| SJCHGC05902 protein [Schistosoma japonicum]
          Length = 324

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 111/356 (31%), Gaps = 55/356 (15%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEI------DSMSLQYSPGNE 56
           Q+ ++    R  +  +   L   ++  ++ R ++++  ++E+       +       G  
Sbjct: 6   QLDNRHLVIRGENTAK--VLRLISIALAAFRGHYIDRGYVEVLPGAFVQT----QVEGGS 59

Query: 57  THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQP 115
           T        L   ++  +  ++  S +   +  + A     FC   ++R  +     H  
Sbjct: 60  T--------LFSLNYFGETAFMSQSSQLYLETCIPA-IGDCFCITRSYRAEKSRTRRHLS 110

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           E+  +E       +  L+    +++              Q+ +      P++      F 
Sbjct: 111 EYNHVEAECPFIDFNGLLNRIEDLVVDVC-----DRIVKQSGDLLLDVNPQFKPPKGPFK 165

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
           R    D    L+N    +  L                 + D        ++   +G    
Sbjct: 166 RLKYEDAIVQLNNLGITNEDLT-------------PFQFGDDIPEAPERRLVDTIGE--P 210

Query: 236 TILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            +L  +PA   +        DPR T   +L    +         +D I+   +      +
Sbjct: 211 VLLTNFPAGLKAFYMLRTKGDPRLTDSVDLLVPGVGELVGGSMRMDNIDDLLK----GYK 266

Query: 295 KKKIYNETYPIDED---FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++I    Y    D   F           G  +GF+R    + G ++I +V   P 
Sbjct: 267 SEEIDPTPYYWYTDQRKF-----GTCPHGGYGLGFERFCTWLLGKDHIRDVCLYPR 317


>gi|88803543|ref|ZP_01119068.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88780555|gb|EAR11735.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 1115

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 66/194 (34%), Gaps = 4/194 (2%)

Query: 13  DFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
             +   R  ++ R+ +   LR+   E +F+EI++  L  + G +   R F      Q  +
Sbjct: 654 HRNDEVRRAIVNRHKVIKLLRDLLDEEEFLEIETPIL--TAGTDEGAREFIVPTRKQ--V 709

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  +P+   + L+  G EK F  A  +R+ +     QPEFT L+   A  S +Q+
Sbjct: 710 GSFYTLPQAPQQFKQMLMVGGFEKYFQIARCFRDEDSRGDRQPEFTQLDLEMAFVSMQQI 769

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     +          K +         +         +       + +        + 
Sbjct: 770 IDLNTRLFNEVVRKIYGKKWVLYPFEVITYKNAMDKYGCDRPDLRYGLQMQDITSIVKET 829

Query: 193 DRHLLYLQAQQAGI 206
              +        GI
Sbjct: 830 SFQVFSKPIADGGI 843



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 9/128 (7%)

Query: 229  NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                N  ++   Y   +              ++++L     E+                 
Sbjct: 970  TFTHNPFSMPAIYDLEKHMNVKGDEIGTIIAQQYDLILNGYEIGGGSVRAHKSEIL---- 1025

Query: 289  EKEMQEKKKIY--NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
              E   +   Y   E                P   GIA G DRL+M++    +I EV+  
Sbjct: 1026 --EATYRNMGYTHEEMMKSVGTMHKAFQYGAPPHGGIAWGIDRLMMILEKKASIREVMAF 1083

Query: 346  PFSQSNQE 353
            P + ++++
Sbjct: 1084 PKTGASED 1091


>gi|327469121|gb|EGF14593.1| aspartate--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 578

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 59/180 (32%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            +  AR+   D    L    +  R    L   +  +    D   + +   +      +  
Sbjct: 374 QDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKVLDLIDASLLHFLWVVDWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +    +    D   +  +++     E+      + D   Q   F
Sbjct: 434 WNEDQNRYQAMHHPFTQGIFQDGQEPDQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEAMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        I  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 494 E-----LLGIGREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 548



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 79/238 (33%), Gaps = 21/238 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNSLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKAVVKKTHGLELT---------EAFPTISYEEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
               L        I+ A D+        ++   +           L  Y         
Sbjct: 296 SLTDLCQSNDSLLIKKALDN-----QEEVMGICVPDAASAFSKKQLSHYYQEMKEFGC 348


>gi|169632443|ref|YP_001706179.1| aspartyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|238688247|sp|B0VRC7|SYD_ACIBS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169151235|emb|CAO99921.1| aspartyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 592

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 70/207 (33%), Gaps = 21/207 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R Y  ++ F+++++  L   +P     ++     +      
Sbjct: 134 RRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLVPSRVQNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-SYE 130
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +     +
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLNDDD 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +       ++   ++   K           F +   +  +EA   YA+ D         
Sbjct: 248 IMDLMEGMTVKLFNDLLGVK-----------FEKFRRMPYSEAMRDYAS-DKPDLRIPLK 295

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             D   L  + +         D    I
Sbjct: 296 LVDVADLMQEVEFKVFAGPAKDPKGRI 322



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KIGHDLNLATCEWAPLWVVDFPMFEE--ADDGKWTSVHHPFTLPKSSVEDVKSNPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS----DEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TGA +I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLVMLMTGATSIRDVIAFPKTKTAE 562


>gi|298245177|ref|ZP_06968983.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297552658|gb|EFH86523.1| aspartyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 602

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 74/199 (37%), Gaps = 16/199 (8%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIR 60
            +  +  +        R  ++ R+ I   +R+Y  E  F+EI++  L + +P     ++ 
Sbjct: 129 PLRLKYRYLDLRRPHMRDNIILRHRIVKEMRDYLDERGFLEIETPILMKSTPEGARDYLV 188

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ AG ++ F  A  +R+ +Q    QPEFT L
Sbjct: 189 PSRLYEGEFYALPQ------SPQQLKQLLMVAGLDRYFQIARCFRDEDQRADRQPEFTQL 242

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   A  S E +M    +++    E   +K    +           +++  EA  RY   
Sbjct: 243 DVEMAFVSEEDVMGLIEDMLIKLIEKTTKKRIKQR--------PFPHLSFKEAMDRYGTD 294

Query: 181 DLGTTLDNPDQPDRHLLYL 199
                 D P      L   
Sbjct: 295 HPDLRFDLPLVEISDLAAA 313



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 50/162 (30%), Gaps = 7/162 (4%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIY 252
             L    A++       +     +    L    E                       +  
Sbjct: 414 FRLRVKMAERLKQIDPEEMALCWVVDFPLFHYDEDLQRYDAEHNPFSGMDEAHIERLDSN 473

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           P D R  K++++     E+      +     QR  F       K    +        L  
Sbjct: 474 PLDIR-AKQYDIICNGFEVGGGSVRINVAELQRKVF----SLMKMSDEQIQEQFGHMLEA 528

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                P   GIA+G DRLVML    +NI EVI  P +QS Q+
Sbjct: 529 FEYGAPPHGGIALGVDRLVMLFADEDNIREVIAFPKTQSAQD 570


>gi|16272271|ref|NP_438483.1| aspartyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260581215|ref|ZP_05849034.1| aspartyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174503|sp|P43817|SYD_HAEIN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|1573287|gb|AAC21981.1| aspartyl-tRNA synthetase (aspS) [Haemophilus influenzae Rd KW20]
 gi|260092140|gb|EEW76084.1| aspartyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 588

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGLWLDTIGVDLG----------KFPVMTWQEAMRRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|332978458|gb|EGK15171.1| aspartate--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 601

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 76/208 (36%), Gaps = 20/208 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
              + +  ++ R    S++R Y  E  F+++++  L   +P     ++    T       
Sbjct: 134 RRPQMQERMVFRAKATSTIRRYLDEQGFLDVETPILTRATPEGARDYLVPSRTRPGNFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +  + E+
Sbjct: 194 LPQ------SPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLTEEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M     +I+   +                  E   +T A+A   YA+   DL   L   
Sbjct: 248 IMSINEGLIQNLFKTMLDVDLG----------EFPRMTYADAMRDYASDKPDLRIPLKLV 297

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D  D          AG         + +
Sbjct: 298 DVADLMQGVEFKVFAGPANDPKGRVAAL 325



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G+ +  +         +     E     +       +P      S        +   +
Sbjct: 422 KIGLDMNMETCEWAPLWVVDFPMFEET--DDGKWTSMHHPFTMPKGSVEELKNSPETALS 479

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
             +++     E+      +     QR  F+           E        L  L    P 
Sbjct: 480 IAYDMVLNGTEIGGGSLRINTVKMQRAVFDALGIS----EEEANEKFSFLLDALKFGAPP 535

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             G+A G DRL+ML+ GA++I +VI  P +++
Sbjct: 536 HGGLAFGLDRLIMLMVGASSIRDVIAFPKTKT 567


>gi|310658604|ref|YP_003936325.1| aspartyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308825382|emb|CBH21420.1| aspartyl-tRNA synthetase [Clostridium sticklandii]
          Length = 586

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 66/190 (34%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +   + R+ +   +R +  +  FI++++  L   +P     ++            
Sbjct: 132 RKPKMQKNFILRHKVTQIVRNFLSQEGFIDVETPMLTKPTPEGARDYLVPSRVSNGKFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    E 
Sbjct: 192 LPQ------SPQLFKQLLMVSGMDRYYQIVKCFRDEDLRADRQPEFTQIDCEMSFVDMED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +I    + A          N       + +T  EA +R+   D        + 
Sbjct: 246 VMQIMERLIAKVFDEAL---------NVKIDLPLQRMTYDEAMSRF-GSDKPDVRFGFEI 295

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 296 VDLTEEVKDC 305



 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 50/159 (31%), Gaps = 9/159 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           H+    A++  +    +     +      E  E N            P  E         
Sbjct: 407 HVRIDAAKKLDLLKKDEYKLLYVTEFPQFEYDEDNNRYVAMHHPFTSPLDEDMELLESNP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                K +++    +EL      + +   Q   F          +   E +      L  
Sbjct: 467 SKVRAKAYDMVLNGVELGGGSIRIHNSKIQEKMFT------ALGFSTEEAWDKFGFLLEA 520

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                P   GIA G DRL+ML+ G  +I EVI  P +Q+
Sbjct: 521 FKYGTPPHGGIAFGLDRLIMLLAGEESIREVIAFPKTQN 559


>gi|301169026|emb|CBW28623.1| aspartyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 588

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGLWLDTIGVDLG----------KFPVMTWQEAMRRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|288574557|ref|ZP_06392914.1| aspartyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570298|gb|EFC91855.1| aspartyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 599

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 54/159 (33%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++ G      +        +     E     +        P  E         
Sbjct: 418 QIRLEIAKEHGHVKDSWEFLWVTEFPLFEWDEEEKRWTSVHHPFTM-PMVEDLPFMDRAP 476

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
               ++ ++L     E+      + DP  Q   F      E + +E+             
Sbjct: 477 GSVRSRAYDLVLNGNEVGGGSIRIHDPAIQSEVFGCLGFSENQARERFG----------F 526

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P   GIA+GFDRLVML+TG+N+I EV+  P
Sbjct: 527 LLDALSYGTPPHGGIALGFDRLVMLLTGSNSIREVMAFP 565



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 60/178 (33%), Gaps = 17/178 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R +  L  R+ +    RE+  +  F E+++  L   +P     ++            
Sbjct: 144 RRNRMQRNLRVRHDVARYTREFLSDRGFCEVETPVLTKSTPEGARDYLVPSRVNPGSFFA 203

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 204 LPQ------SPQIFKQILMISGMDRYFQIAKCFRDEDLRADRQPEFTQVDIELSFLTEED 257

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + +     +    +                 +    +   EA  R+ +      +   
Sbjct: 258 IYEMMEAYMVGLFKDGLGVELQ---------TPFLRMPYREAMDRFGSDKPDLRIPFE 306


>gi|306820421|ref|ZP_07454057.1| aspartate--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551496|gb|EFM39451.1| aspartate--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 593

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A+Q G+   ++     +      E  E              P  E         
Sbjct: 413 HLRIEVARQLGLIDDNEYKLLFVTEFPQFEYDEEEQRFVAVHHPFTMPMDEDIELLDTDR 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +    K +++    +EL      + D   Q   FE     K+    + +      L    
Sbjct: 473 EKVRAKAYDIVLNGVELGGGSIRIHDSKVQEKMFECLGFSKE----DAWEKFGFLLEAFK 528

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DR VML+   ++I EVI  P
Sbjct: 529 YGTPPHGGIALGLDRFVMLLAKEDSIREVIAFP 561



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 70/190 (36%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +   + R  + +++R Y  E+ FIEI++  L   +P     ++            
Sbjct: 138 RKPKMQRNFVLRQKVTNAVRNYLSESGFIEIETPILNKPTPEGARDYLVPSRVNNGKFYA 197

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 198 LPQ------SPQLFKQLLMVSGFDRYFQIARCFRDEDLRADRQPEFTQIDCEMSFVEPED 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +++             + ++ +       +T  EA  R+   D        + 
Sbjct: 252 VMQMAEKMVQ---------KIFKETLDVDVKLPLMRMTYKEAMERF-GSDKPDLRFGFEI 301

Query: 192 PDRHLLYLQA 201
            +   +    
Sbjct: 302 QNLSEVVKTC 311


>gi|154323340|ref|XP_001560984.1| hypothetical protein BC1G_00069 [Botryotinia fuckeliana B05.10]
 gi|150842298|gb|EDN17491.1| hypothetical protein BC1G_00069 [Botryotinia fuckeliana B05.10]
          Length = 736

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 13/186 (6%)

Query: 5   PSQPWWNRDFHYRRR------PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET 57
           P+Q +     H   R        L+ R+ +   +R+Y     F EI++  L + +P    
Sbjct: 222 PAQKFGPDSRHLEVRFEPDLYERLMFRSKLAKLVRKYLYSVSFDEIETPILFKSTPEG-- 279

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F        +      L  SP+   + L+A+G  K F FA  +R+ +     QPEF
Sbjct: 280 -AREFLVPTRKPGYA---YALPQSPQQYKQILMASGVTKYFQFAKCFRDEDLRADRQPEF 335

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T ++   +    + +M+    +++        +     +    P ++   +T  EA +++
Sbjct: 336 TQIDMEMSWADGQYVMQTVEELVKSTHRQIQSEQLEAVHSLELPKTDFPRMTYEEAMSKH 395

Query: 178 ANIDLG 183
            +    
Sbjct: 396 GSDKPD 401



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
              ++L    +EL      +     Q+   +  ++      +E           L    P
Sbjct: 623 ADHYDLVLNGVELGGGSKRIHSAEIQKFIMKSVLKMS----DERMSDFNHLFEALRAGCP 678

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +G A+GFDR V ++TG  ++ +VI+ P
Sbjct: 679 PHAGFAIGFDRWVAVLTGRESVRDVIFFP 707


>gi|119511813|ref|ZP_01630914.1| aspartyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119463525|gb|EAW44461.1| aspartyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 595

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 69/207 (33%), Gaps = 16/207 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
              R    +  R+ +  ++R +  +   FIEI++  L   +P      R +         
Sbjct: 136 RRERMAQNMQLRHQVVKAMRRFLEDLEGFIEIETPILTRSTPEG---ARDYILPSRSN-- 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E+
Sbjct: 191 PGEWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSQEE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                      +T A+A +RY +    T       
Sbjct: 251 ILALNEKLVAHIFKTVKG---------IELNLPFPRLTYADAMSRYGSDKPDTRYGLELV 301

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
               +L     +             I 
Sbjct: 302 NVSDVLKDSGFKVFRDAIAHGGIVKIL 328



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 39/130 (30%), Gaps = 5/130 (3%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I    +              +P       ++        + ++L    +E+      
Sbjct: 436 LLWITDFPMFEWNADEKRLEALHHPFTAPHPEDVSDLKTARAQAYDLVLNGLEIGGGSLR 495

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           +     Q+  FE           E        L       P   GIA G DRLVML+ G 
Sbjct: 496 IYQSDIQQQVFEAIGLS----PEEAQNKFGFLLDAFEYGTPPHGGIAYGLDRLVMLLAGE 551

Query: 337 NNINEVIWTP 346
            +I +VI  P
Sbjct: 552 ESIRDVIAFP 561


>gi|217969591|ref|YP_002354825.1| aspartyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217506918|gb|ACK53929.1| aspartyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 599

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R     + R +     FI++++  L   +P     ++            
Sbjct: 131 RRPQMQKNLMLRYKTTMAFRRFLDGAGFIDVETPMLTKSTPEGARDYLVPSRVHP----- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 186 -GQFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQPEFTQVDLETSFMNEHE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   + A         +     +    +T AEA  RY +      +     
Sbjct: 245 ITALVEEMIRYVFKEA---------MAVELPAPFPRMTYAEAMRRYGSDKPDLRVTLELT 295

Query: 192 PDRHLLYLQAQQ 203
                +   A +
Sbjct: 296 DVTDAVQDVAFK 307



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G           +    + E  E +     C      P  E         
Sbjct: 410 ALRIKLGHEKGYVTGEAWRPLWVVDFPMFEYDEDDKRWTACHHPFTSPKDEHIDLLESNP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K ++L     E+      +     Q   FE           E        L  L 
Sbjct: 470 GECLAKAYDLALNGWEIGGGSVRIHRADVQARVFEALNI----GPEEQQAKFGFLLDALK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DR+V ++TGA +I +VI  P
Sbjct: 526 YGAPPHGGLAFGLDRIVTMMTGAESIRDVIAFP 558


>gi|156973887|ref|YP_001444794.1| aspartyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166225442|sp|A7N1J1|SYD_VIBHB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|156525481|gb|ABU70567.1| hypothetical protein VIBHAR_01597 [Vibrio harveyi ATCC BAA-1116]
          Length = 592

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R            +Q +      E   +  +EA  R+   D     +  + 
Sbjct: 244 VRATTEKMVREM----------WQELLNVDLGEFPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 18/151 (11%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  + TW+ ++        E + G ++        P   +A           +  +
Sbjct: 415 KDLDITKEGTWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT-E 315
           ++     E+      + +   Q   F+      +E Q K              L  L   
Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFG----------FLLDALKFG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|332883986|gb|EGK04266.1| aspartyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 584

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 22/189 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ I    R Y  E QF+E+++  L   +P      R F     +   
Sbjct: 132 LRRDVVRKNLELRHKIAFETRRYLDERQFLEVETPVLIGSTPEG---ARDFVVPSRMN-- 186

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   ++ + E
Sbjct: 187 -PGEFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSYVNQE 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     + +   +V                 +   +T A    +Y   D   T    +
Sbjct: 246 DVLNMFEGLTKHLFKVVKGIDIP----------DFPRMTYA-HAMKYYGSDKPDTRFGME 294

Query: 191 QPDRHLLYL 199
             +   L  
Sbjct: 295 FVEIKDLTE 303



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 58/191 (30%), Gaps = 11/191 (5%)

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDR----HLLYLQAQQAGIRVAHDDTWSDI 217
           F  PE +       +    DL   +    +  +     L    A+Q G+R  +      +
Sbjct: 367 FYNPEDLKKWAERCQAEPGDLILIICGETEKAQKQLGELRLEVAEQLGLRDKNQFNCLWV 426

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
               L+EK E              P  E                +++    +E+      
Sbjct: 427 IDFPLLEKDEELGRYFAKHHPFTSPKEEDIALLDSDPGVVRANAYDMVINGVEVGGGSVR 486

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL-TEMPQSSGIAMGFDRLVMLVTG 335
           + +   Q   F+           E       FL        P  +G+A G DRLV L  G
Sbjct: 487 IFNSQLQNKMFQIL-----GFTEEKAQAQFGFLMNAFKYGAPPHAGLAFGLDRLVSLFAG 541

Query: 336 ANNINEVIWTP 346
            ++I + I  P
Sbjct: 542 LDSIRDCIAFP 552


>gi|282882110|ref|ZP_06290751.1| aspartate--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281298140|gb|EFA90595.1| aspartate--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 589

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 53/161 (32%), Gaps = 13/161 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+   +   +      I    L E  E              P  E     +   
Sbjct: 411 NLRNKIARDLDLIDKNSYEMLWITDFPLFEYDEDEKRYVAKHHPFTSPKDEDLDIILSNP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +    K +++     E+      + D   Q+  F+     +   K+K            L
Sbjct: 471 EKARAKAYDIVINGDEMGGGSIRINDQEIQKKMFKALGFTDEDAKEKFG--------FLL 522

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                  P   G+A G DRL ML TGA NI +VI  P +QS
Sbjct: 523 EAFKYGAPPHGGLAYGLDRLTMLFTGAENIRDVIAFPKTQS 563



 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 74/210 (35%), Gaps = 31/210 (14%)

Query: 14  FHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRA 61
              + R            L  R+ I    R++F +N FIE+++  L   +P     ++  
Sbjct: 129 MRLKYRTLDLRKPSMLRNLKLRSKIYKITRDFFYDNGFIEVETPMLTKPTPEGARDYLVP 188

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                     + +      SP+   + L+ +G ++       +R+ +     QPEFT ++
Sbjct: 189 SRVNSGKFYALPQ------SPQLMKQLLMVSGLDRYIQITKCFRDEDLRANRQPEFTQID 242

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  + + +M      ++             + ++ +       +  +EA  R+  +D
Sbjct: 243 MELSFVTEDDVMSINEKFLQ---------KLFKEMLDIDIKLPLRRMKYSEAMDRF-GVD 292

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
                   +  D   +    + +G +V  +
Sbjct: 293 KPDLRFGMELKD---ISDIVKDSGFKVFEE 319


>gi|15895537|ref|NP_348886.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|24212414|sp|Q97GU6|SYD_CLOAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|15025273|gb|AAK80226.1|AE007728_5 Aspartyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325509685|gb|ADZ21321.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 595

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 69/194 (35%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+     +R++  E  F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQKIFKIRHKTTKIIRDFMDEENFLEMETPILTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             K   L  SP+   + L+ +G +K F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 193 NGKFYALPQSPQLFKQLLMVSGYDKYFQIAKCFRDEDLRANRQPEFTQVDMEMSFVEEDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +I+   +                 +  E     +   R+  +++    +    
Sbjct: 253 VIELNERLIQKVFKEMAGVEVKLPIERMTWKTAMEKYGSDKPDLRF-GMEINDISEAVST 311

Query: 192 PDRHLLYLQAQQAG 205
            D  +     ++ G
Sbjct: 312 SDFKVFKSAIEEGG 325



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 6/154 (3%)

Query: 195 HLLYLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
            L    A++  I +   +  +  I    L+   E              P  E        
Sbjct: 412 ALRLEIAKELEILKDNKEFRFVWITEFPLLSYNEEEERFQAEHHPFTMPMDEDIEYLESD 471

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                 K +++     EL      + D   Q   F+     K+      +      L   
Sbjct: 472 PGRVRAKAYDIVLNGEELGGGSVRIHDTALQERMFKVLGFTKES----AWERFSFLLEAF 527

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P  +G+A G DRL+M + G  NI +VI  P
Sbjct: 528 KFGPPPHAGLAYGLDRLIMFLAGTENIKDVIAFP 561


>gi|270160207|ref|ZP_06188863.1| aspartyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289165023|ref|YP_003455161.1| Aspartyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269988546|gb|EEZ94801.1| aspartyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288858196|emb|CBJ12064.1| Aspartyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 593

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 89/237 (37%), Gaps = 35/237 (14%)

Query: 1   MHQIPSQPWW-------NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIE 43
           ++Q P+ P+        N D  Y+ R            L  R+ + S +R Y  E  F++
Sbjct: 102 LNQSPTPPFLPDDFQIVNEDLRYKYRYIDLRRPAMKHKLTVRHQLNSCIRTYLNEQNFLD 161

Query: 44  IDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           I++  L   +P     ++            + +      SP+   + L+ +G +K +   
Sbjct: 162 IETPMLTKATPEGARDYLVPSRVHPGQFYALPQ------SPQLFKQLLMISGFDKYYQIV 215

Query: 102 HAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
             +R+ +     QPEFT L+   A    E ++     ++         K    Q +N + 
Sbjct: 216 RCFRDEDLRADRQPEFTQLDIEMAFIDEECILNLIEGLL---------KTVFKQILNVDL 266

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
             + + ++ AEA  R+   D     +  +  D   L  ++      VA +D  S + 
Sbjct: 267 PEKLKRMSYAEAMRRF-GSDKPDLRNPLELVDVADLVKESDFKVFSVAANDIDSRVV 322



 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 47/152 (30%), Gaps = 8/152 (5%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIE---PNLGINCCTILDRYPAPESALANIYPADPRFT 259
           + G          ++   I     E    +  ++        P                 
Sbjct: 415 KLGHDKNLLKASWELLWIIDWPMFELDYESKKLSPMHHPFTSPKNLDPNNLRTNPTHTLA 474

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           K +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 475 KAYDIVINGYEIGGGSIRIHQSELQKAVFE----LLGINEQEAQEKFGFLLDALQYGAPP 530

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             GIA+G DRL ML+T + +I +VI  P +Q+
Sbjct: 531 HGGIALGIDRLAMLLTDSTSIRDVIAFPKTQT 562


>gi|134298624|ref|YP_001112120.1| aspartyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|238685538|sp|A4J2J2|SYD_DESRM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|134051324|gb|ABO49295.1| aspartyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 600

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 66/190 (34%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R+    S+R++  ++ F+EI++  L   +P     ++            
Sbjct: 142 RRPEMHKAMMLRHRASKSIRDFLDQHGFLEIETPMLTKSTPEGARDYLVPSRVNPGKFYA 201

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ F     +R+ +     QPEFT ++   +    E 
Sbjct: 202 LPQ------SPQLFKQILMLAGMERYFQIVRCFRDEDLRADRQPEFTQIDLEMSFVEAED 255

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I            S         +    ++  EA  R+   D   T    + 
Sbjct: 256 VMGLMEQMIAEVCSDTIGVKIS---------TPIPRLSYQEAMDRF-GSDKPDTRFGLEL 305

Query: 192 PDRHLLYLQA 201
            D   +  Q 
Sbjct: 306 KDITPIAAQC 315



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 49/152 (32%), Gaps = 13/152 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +       +  +    L+E                 PA E              
Sbjct: 421 LAERLELIPQGMWNFLWVTDFPLLEYDSEAGRFFAMHHPFTSPAEEDLPLLESNPGKVRA 480

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT- 314
           + +++    +E+      +     Q   F+     + + K+K            L     
Sbjct: 481 RAYDMVLNGVEIGGGSIRIHRRDIQELMFKALGMSQEEAKEKFG--------FMLEAFEY 532

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   G+A G DRLVML+ G ++I +VI  P
Sbjct: 533 GAPPHGGLAFGLDRLVMLLAGKDSIRDVIAFP 564


>gi|307545148|ref|YP_003897627.1| aspartyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307217172|emb|CBV42442.1| aspartyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 593

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 66/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ I  ++R Y     F++I++  L   +P     ++    T       
Sbjct: 132 RRPEMIDKLRLRSRISHTVRAYLENQGFLDIETPILTRATPEGARDYLVPSRTHAGSFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 192 LPQ------SPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQIDIEASFVEEDD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +IR   +                  E   +  AEA  R+   D        + 
Sbjct: 246 IMAITEGMIRQLFQEVLD----------VELPEFPRMPYAEAMQRF-GSDKPDLRIPLEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +     +
Sbjct: 295 VDVDDLMKDVDFKVFSGPANADDGRV 320



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 43/138 (31%), Gaps = 5/138 (3%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           WS ++        E + G                           ++ +++     EL  
Sbjct: 425 WSPLWVVDFPMFEEDDNGRLQALHHPFTAPSCDVETLKQRPAEALSRAYDMVLNGTELGG 484

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVML 332
               + D   Q+               E        L  L    P   G+A G DRLVML
Sbjct: 485 GSIRIHDQTMQQAVLASLGI----GEEEAREKFGFLLDALQYGAPPHGGLAFGLDRLVML 540

Query: 333 VTGANNINEVIWTPFSQS 350
           + GA  I EVI  P +QS
Sbjct: 541 MGGARTIREVIAFPKTQS 558


>gi|82701736|ref|YP_411302.1| aspartyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|97196742|sp|Q2YBG1|SYD_NITMU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|82409801|gb|ABB73910.1| aspartyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 588

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 72/203 (35%), Gaps = 17/203 (8%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +      + +  L  R  +  ++R +  ++ FI++++  L   +P     ++     
Sbjct: 124 EHRYLDLRRPQMQENLRLRYKVAMAVRLFLDQHGFIDVETPMLTKSTPEGARDYLVPSRV 183

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   
Sbjct: 184 NTGHFFALPQ------SPQLFKQLLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDIET 237

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +  +  Q+M+    +I    +            N +  +    +T  EA ++Y +     
Sbjct: 238 SFLNESQIMQMMERMICTVFKSV---------RNIDLPTPFPRLTHGEAMSKYGSDKPDM 288

Query: 185 TLDNPDQPDRHLLYLQAQQAGIR 207
            +         ++     +    
Sbjct: 289 RVSLVLTELTDVMQEVEFKVFRE 311



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 41/137 (29%), Gaps = 5/137 (3%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
                 +    + E+ E              PA           +   +K +++     E
Sbjct: 425 GWKPLWVVDFPMFERDEEENRWKALHHPFTSPAEGHEDLLETDPEKALSKAYDMVLNGSE 484

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F           +E        L  L    P   GIA G DR+
Sbjct: 485 IGGGSVRIHRQEVQSKVFRALNI----GADEANEKFGFLLEALQYGAPPHGGIAFGLDRI 540

Query: 330 VMLVTGANNINEVIWTP 346
           V ++ GA +I EVI  P
Sbjct: 541 VAMMAGAESIREVIAFP 557


>gi|261210674|ref|ZP_05924966.1| aspartyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260840159|gb|EEX66739.1| aspartyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 591

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                          +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELLNVDLGN----------FPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  +          +D    +
Sbjct: 293 VDVADLLKEVDFKVFSGPANDPKGRV 318



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   +        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFEGDDEGNVAAMHHPFTS-PLNLTPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|254478006|ref|ZP_05091390.1| aspartyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|214036010|gb|EEB76700.1| aspartyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 613

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +  ++RE+  +N FIEI++  L   +P     ++            
Sbjct: 163 RRPSMQRNLITRFKLTQAVREFLNDNGFIEIETPMLIKSTPEGARDYLVPSRIYPGKFYA 222

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A   R+ +     QPEFT ++   +    E 
Sbjct: 223 LPQ------SPQIFKQLLMIAGFDRYYQIARCLRDEDLRADRQPEFTQIDIEMSFVEVED 276

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I+   +            + +       +T  EA  R+   D        + 
Sbjct: 277 VLDINERMIKHVFKKVL---------DVDLDIPFRRLTYQEAMERF-GTDKPDLRFGMEL 326

Query: 192 PD 193
            D
Sbjct: 327 KD 328



 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 52/159 (32%), Gaps = 9/159 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++  +       +  +    L+E  E              P  E         
Sbjct: 436 HLRVEMAKRFNLIDESKYEFVWVVDFPLLEYDEEERRYVAKHHPFTSPKDEDIDLLEKEP 495

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                K +++    IE+      + D   Q   F      K       E +      +  
Sbjct: 496 LKVKAKLYDIILNGIEIGGGGIRISDTELQMRMF------KVLGFSEEEAWKEFGFLMEA 549

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                P   GIA G DRL M++TG++ I +VI  P +Q+
Sbjct: 550 FKYGAPPHGGIAYGLDRLAMIMTGSDTIRDVIAFPKTQN 588


>gi|119504256|ref|ZP_01626336.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119459764|gb|EAW40859.1| aspartyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 592

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 67/186 (36%), Gaps = 18/186 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  L+ R  + SS+R+Y   + F++I++  L   +P     ++    T       
Sbjct: 132 RRPEMQNNLMFRARLTSSIRQYLDGHGFLDIETPILTRATPEGARDYLVPSRTHEGEFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +      
Sbjct: 192 LPQ------SPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQPEFTQIDIETSFLEESD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R                      +  ++T  EA  RY +      +     
Sbjct: 246 IMTLTEGLVRSVFTE----------HLNVDLGDFPHMTWHEAMERYGSDKPDLRIKLELV 295

Query: 192 PDRHLL 197
               L+
Sbjct: 296 SIDDLM 301



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 6/123 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           N  +         PA E A     P++   ++ +++     EL      +  P  Q+  F
Sbjct: 442 NGELTPLHHPFTAPACEEAALRDSPSEA-LSRAYDMVLNGSELGGGSIRIHRPDMQQAVF 500

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +    +     +E        L  L    P   G+A G DRLV L+ G  +I +VI  P 
Sbjct: 501 DVLGIDS----DEAAEKFGFLLDALQYGAPPHGGLAFGLDRLVTLMVGGQSIRDVIAFPK 556

Query: 348 SQS 350
           +QS
Sbjct: 557 TQS 559


>gi|37521497|ref|NP_924874.1| aspartyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|46577177|sp|Q7NJA4|SYD_GLOVI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|35212494|dbj|BAC89869.1| aspartyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 595

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R +  L  R+ +   +R +  E  F EI++  L   +P     ++            
Sbjct: 133 RRGRMQKLLRLRHRVMQIMRRHLDERGFTEIETPVLVKSTPEGARDYLVPSRVNPGDWFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   +  S E+
Sbjct: 193 LPQ------SPQLFKQLLMVAGFDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFLSMEE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +       S              +T AEA  RY +    T       
Sbjct: 247 IIALNEGLVAAILQETMGLELS---------LPLPRLTYAEAMVRYGSDKPDTRFGLELV 297

Query: 192 PDRHLLYL 199
               +   
Sbjct: 298 EVSEVFRE 305



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 48/156 (30%), Gaps = 13/156 (8%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G  +   D        +    +              +P       + +         +
Sbjct: 419 KMGEELGLIDPNRHNLLWVTDFPMFEWNAEEKRLEALHHPFTAPRPEDEHDLKTARALAY 478

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-EMP 317
           ++    +E+      +     Q   FE     E + + K            L       P
Sbjct: 479 DIIWNGVEVGGGSLRIYRRALQERVFETIGLTEEEARAKFG--------FLLDAFEYGTP 530

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              GIA GFDR VML+ G  +I EVI  P +Q  Q+
Sbjct: 531 PHGGIAYGFDRFVMLIAGEQSIREVIAFPKTQRAQD 566


>gi|329920161|ref|ZP_08276992.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|328936615|gb|EGG33059.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 612

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 76/232 (32%), Gaps = 27/232 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R+ I  ++ +YF +  F+ I++ +L + +P     ++            
Sbjct: 133 RRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLVPSRVYPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQPEFTQVDLETSFLDEKG 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                 +  + IT  EA  +Y +       D    
Sbjct: 247 VQTYTEGLLKKVMKDVMGIDIV---------TPIKRITWDEAMNKYGSDKPDIRYDMHLH 297

Query: 192 PDRHLLYLQAQQAGIR------VAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
               +      +          V       D       +KIE          
Sbjct: 298 DLSEIFKDSEFKVFADTLSNGGVIKGIAVKDGAEAYSRKKIEEKQEYIKRYH 349



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++ GI   H+  ++ +    L E  E +            P  +          
Sbjct: 408 LRRTFAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPH 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K++     Y      L  L  
Sbjct: 468 KAHARSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKER----AYEQFGFLLEALDM 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A+G DR  ML+   +NI +VI  P
Sbjct: 524 GFPPHAGLAIGLDRFAMLLAEKDNIRDVIAFP 555


>gi|315653586|ref|ZP_07906506.1| aspartate--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315488948|gb|EFU78590.1| aspartate--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 612

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 76/232 (32%), Gaps = 27/232 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R+ I  ++ +YF +  F+ I++ +L + +P     ++            
Sbjct: 133 RRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLVPSRVYPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQPEFTQVDLETSFLDEKG 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                 +  + IT  EA  +Y +       D    
Sbjct: 247 VQTYTEGLLKKVMKDVMGIDIV---------TPIKRITWDEAMNKYGSDKPDIRYDMHLH 297

Query: 192 PDRHLLYLQAQQAGIR------VAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
               +      +          V       D       +KIE          
Sbjct: 298 DLSEIFKDSEFKVFADTLSNGGVIKGIAVKDGAEAYSRKKIEEKQEYIKRYH 349



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++ GI   H+  ++ +    L E  E +            P  +          
Sbjct: 408 LRRTFAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPH 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K++     Y      L  L  
Sbjct: 468 KAHARSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKER----AYEQFGFLLEALDM 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A+G DR  ML+   +NI +VI  P
Sbjct: 524 GFPPHAGLAIGLDRFAMLLAEKDNIRDVIAFP 555


>gi|262374903|ref|ZP_06068137.1| aspartyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309916|gb|EEY91045.1| aspartyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 594

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 70/203 (34%), Gaps = 22/203 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R YF +N F+++++  L   +P     ++            
Sbjct: 134 RRPEMLDRLRFRSKLTNLIRNYFEDNGFLDVETPILTRATPEGARDYLVPSRVSNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-SYE 130
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +     +
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDVETSFMSDDD 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
            +       ++   E+ N             F +   +T  +A   YA+   D+   L  
Sbjct: 248 IMDLMETLTVKMFKELLN-----------VEFDKFPRMTYNDAMRDYASDKPDMRIPLKL 296

Query: 189 PDQPDRHLLYLQAQQAGIRVAHD 211
            D  D          AG      
Sbjct: 297 VDVADLMQDVEFKVFAGPAKDPK 319



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S            +
Sbjct: 415 KIGHDMKLATCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEEVKNNPGAALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      + +   Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEIGGGSLRIHNLEMQKAIFEALGI----GEEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRLVML+TG  +I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLVMLMTGGASIRDVIAFPKTKTAE 562


>gi|225016791|ref|ZP_03705983.1| hypothetical protein CLOSTMETH_00703 [Clostridium methylpentosum
           DSM 5476]
 gi|224950459|gb|EEG31668.1| hypothetical protein CLOSTMETH_00703 [Clostridium methylpentosum
           DSM 5476]
          Length = 593

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 70/218 (32%), Gaps = 14/218 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ I  + R+Y+ EN FIEI++  L   SP     ++            
Sbjct: 139 RRGEMQQSLFMRHKITKAARDYYDENGFIEIETPILIKSSPEGARDYLVPSRVHPGKFFA 198

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   +  + AG ++    A  +R+ +     QPEFT ++   +    + 
Sbjct: 199 LPQ------SPQQYKQLTMLAGFDRYMQIARCFRDEDLRADRQPEFTQIDLEMSFVDVDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++     ++   +                          +   R+  ++L    D    
Sbjct: 253 VIEVNEGFVQYVFKKILDVDVQLPLRRIRYEEAMNRFGSDKPDTRF-GLELTDLSDLLRN 311

Query: 192 PDRHLLYLQAQ-----QAGIRVAHDDTWSDIFSRILIE 224
            +  +     +        ++   D        +++  
Sbjct: 312 TEFKVFAGALETGSVRAINVKGGADKLSRKEIDKLVEF 349



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 51/162 (31%), Gaps = 9/162 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A + G+   +      +    L E  E               A E A   +   
Sbjct: 413 ALRCHLADKLGLIEDNSYDLLWVTDFPLFEYDEEEGRYAAKHHPFTAVADEDADKLLSDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--TYPIDEDFLAC 312
                K ++L     EL      + DP  Q   F      K   + E          +  
Sbjct: 473 VHCHAKAYDLILNGCELGGGSIRINDPEMQSKMF------KALGFTEEQAQEQFGFLINA 526

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                P   G+A G DRLVML+ G  +I +VI  P  Q+  E
Sbjct: 527 FKYGAPPHGGMAYGLDRLVMLMLGKPSIRDVIAFPKVQNASE 568


>gi|319896649|ref|YP_004134842.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432151|emb|CBY80502.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 588

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHDLWLDTIGVDLG----------KFPVMTWQEAMCRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E                       + P 
Sbjct: 409 ALRLKLGRDLGLTRLDEWKPLWVIDFPMFERDEEGNLAAMHHPFTSPKDFTPEQLEVNPT 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           D      +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 469 DA-VANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|312874150|ref|ZP_07734184.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090220|gb|EFQ48630.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 612

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 76/232 (32%), Gaps = 27/232 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R+ I  ++ +YF +  F+ I++ +L + +P     ++            
Sbjct: 133 RRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLVPSRVYPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQPEFTQVDLETSFLDEKG 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                 +  + IT  EA  +Y +       D    
Sbjct: 247 VQTYTEGLLKKVMKDVMGIDIV---------TPIKRITWDEAMNKYGSDKPDIRYDMHLH 297

Query: 192 PDRHLLYLQAQQAGIR------VAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
               +      +          V       D       +KIE          
Sbjct: 298 DLSEIFKDSEFKVFADTLSNGGVIKGIAVKDGAEAYSRKKIEEKQEYIKRYH 349



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++ GI   H+  ++ +    L E  E +            P  +          
Sbjct: 408 LRRTFAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPH 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K++     Y      L  L  
Sbjct: 468 KAHARSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKER----AYEQFGFLLEALDM 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A+G DR  ML+   +NI +VI  P
Sbjct: 524 GFPPHAGLAIGLDRFAMLLAEKDNIRDVIAFP 555


>gi|229515548|ref|ZP_04405007.1| aspartyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229347317|gb|EEO12277.1| aspartyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 591

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 66/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L  +          +D    +
Sbjct: 293 VDVADLLKEVDFKVFSGPANDPKGRV 318



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   +        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFEGDDEGNVAAMHHPFTS-PLNLTPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|147669288|ref|YP_001214106.1| aspartyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|189082095|sp|A5FRE3|SYD_DEHSB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146270236|gb|ABQ17228.1| aspartyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 598

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 15/181 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +RE+  +  FIEI++  L   +P      R +     +    
Sbjct: 133 RRQGMKNNLIIRHKAVRFMREFLNDQGFIEIETPILIKSTPEGA---RDYLVPSRLF--P 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ AG EK +  A  +R+ +     QPEFT L+   +    E +
Sbjct: 188 GKFFALPQSPQQLKQLLMVAGMEKYYQVARCFRDEDLRADRQPEFTQLDMEMSFVDEEDM 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           MK   ++                  +     +   I+ A+A  +Y   D        +  
Sbjct: 248 MKLMEDLFTGLVANV--------RPDMKYNKKFPRISFADATEKY-GCDKPDLRFGMELA 298

Query: 193 D 193
           D
Sbjct: 299 D 299



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A +  +   ++ +++ +    L +  E     +        P    +   +   
Sbjct: 417 EMRNQLAVKLNLCDKNELSFAFVVDFPLFQWDEEGKRWDSVHHPFTAPLE--SDMPLMDT 474

Query: 255 DPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF--- 309
           DP    ++ +++     E+      +     QR  F           +E   IDE F   
Sbjct: 475 DPGRVGSRAYDVVCNGYEIAGGSIRIHQADLQRKVFH-----LLGYNDE--QIDERFGHL 527

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L       P   G+A G DR VML+ G  +I EVI  P +Q+ Q+
Sbjct: 528 LEAFEFGAPPHGGVAPGIDRFVMLLAGETSIREVISFPKNQAAQD 572


>gi|315926757|gb|EFV06131.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 615

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 78/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 151 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 210

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 211 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 264

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++K     ++   +   ++I + F+ +      E       +     
Sbjct: 265 QIDVEMSFCEQKDVIKVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDL 324

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 325 KFIDVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 375



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 468 EQNDDGSYSAMHHPFTMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 527

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 528 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 577

Query: 342 VIWTP 346
           VI  P
Sbjct: 578 VIAFP 582


>gi|256274257|gb|EEU09165.1| Msd1p [Saccharomyces cerevisiae JAY291]
          Length = 658

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 6/149 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +  + + + FL KR+ I   +R  F    F E+++  L + +P      R F 
Sbjct: 148 PPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATPEG---AREFL 204

Query: 64  TELIIQDHIRKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                +    KP +  L  SP+   + L+A+G  K +  A  +R+ +     QPEFT ++
Sbjct: 205 VPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQPEFTQVD 264

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQK 150
              A  + E +MK     +       ++K
Sbjct: 265 MEMAFANSEDVMKIIEKTVSGVWSKFSKK 293



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 10/115 (8%)

Query: 237 ILDRYPAPE----SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               +P                +    + ++L    +EL      + DP  Q + FE  +
Sbjct: 516 CSTHHPFTMVKLKDYEKLEKTPEKCLGQHYDLVVNGVELGGGSTRIHDPRLQDYIFEDIL 575

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +      +  Y +    L       P  +G A+GFDR+  ++    +I +VI  P
Sbjct: 576 KI-----DNAYELFGHLLNAFDMGTPPHAGFAIGFDRMCAMICETESIRDVIAFP 625


>gi|71906274|ref|YP_283861.1| aspartyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|97196648|sp|Q47IE0|SYD_DECAR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71845895|gb|AAZ45391.1| aspartyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 599

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 67/192 (34%), Gaps = 18/192 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R     + R +  +N FI+I++  L   +P     ++            
Sbjct: 131 RRPQMQNNLMLRYKTSRAFRRFLDDNGFIDIETPMLTKSTPEGARDYLVPSRVHP----- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  S  +
Sbjct: 186 -GQFFALPQSPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQPEFTQVDIETSFMSEAE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +IR   + A                +   +T AEA  R+ +      +     
Sbjct: 245 IMALTEKLIRTVFKEAID----------VDLPDFPRMTYAEAMHRFGSDKPDLRVTLELT 294

Query: 192 PDRHLLYLQAQQ 203
                    A +
Sbjct: 295 EVTDAFKDVAFK 306



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G           +    + E  + +     C      P  E     +   
Sbjct: 410 ALRIKIGHEKGFVTGAKWAPLWVIDFPMFEYDDESKRWTACHHPFTSPKDEHLDLLVSDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K ++L     EL      +     Q   F            E        L  L 
Sbjct: 470 GKCLAKAYDLALNGWELGGGSVRIHRSDVQEKVFSALNI----GPEEQQAKFGFLLDALK 525

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DR+V ++TGA +I +VI  P
Sbjct: 526 YGAPPHGGLAFGLDRIVTMMTGAESIRDVIAFP 558


>gi|317484492|ref|ZP_07943402.1| aspartyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924268|gb|EFV45444.1| aspartyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 607

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 64/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R    L  R+    ++R       F+E+++  L   +P     ++            
Sbjct: 151 RRPRMARNLALRSRTAMAIRNELASQGFLEVETPILTKSTPEGARDYLVPSRLNHGQFYA 210

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   +  + AG ++ F  A  +R+ +     QPEFT ++   +    +Q
Sbjct: 211 LPQ------SPQQFKQFCMIAGLDRYFQIARCFRDEDLRADRQPEFTQVDIEMSFADEKQ 264

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++    + A               +    +T  EA +RY  +D   T    + 
Sbjct: 265 VMDMAEGLMIRVFKEALGADIP---------APFPRMTWDEAMSRY-GVDKPDTRFGLEL 314

Query: 192 PD 193
            D
Sbjct: 315 QD 316



 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+   +   +  +    L E  E       C      P        +        + 
Sbjct: 427 EKLGLIPENAWNFLWVTDFPLYEYSEEENRYVACHHPFTAPKDGDLEKMVSEPAATKARA 486

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           +++     E+      + +   QR  FE     K+  Y   +     F+  L    P   
Sbjct: 487 YDMVLNGNEVGGGSIRIHEAAVQRKMFEALGFSKES-YESQFGY---FIQALEHGAPPHG 542

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DRL+ML++ + +I +VI  P
Sbjct: 543 GIAFGLDRLIMLMSDSPSIRDVIAFP 568


>gi|254506050|ref|ZP_05118194.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219550868|gb|EED27849.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 592

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 68/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R   +                  E   +  +EA  R+   D     +  + 
Sbjct: 244 VRATTEKMVRDMWQELLSVDLG----------EFPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 6/145 (4%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  ++ W+ ++        E + G ++        P   +A           +  +
Sbjct: 415 KDLELTDENAWAPLWVVDFPMFEEDDEGYLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
           ++     E+      + D   Q   F+    E     +E        L  L    P  +G
Sbjct: 475 DMVLNGYEVGGGSVRIHDAEMQAAVFDILGIEA----DEQQLKFGFLLDALKFGTPPHAG 530

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           +A G DRLVML+ G  NI +VI  P
Sbjct: 531 LAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|148926627|ref|ZP_01810308.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145845146|gb|EDK22241.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 615

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 78/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 151 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 210

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 211 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 264

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++K     ++   +   ++I + F+ +      E       +     
Sbjct: 265 QIDVEMSFCEQKDVIKVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDL 324

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 325 KFIDVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 375



 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 468 EQNDDGSYSAMHHPFTMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 527

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGANNI E
Sbjct: 528 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANNIRE 577

Query: 342 VIWTP 346
           VI  P
Sbjct: 578 VIAFP 582


>gi|118474727|ref|YP_892354.1| aspartyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166225333|sp|A0RQ71|SYD_CAMFF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118413953|gb|ABK82373.1| aspartyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 584

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 75/229 (32%), Gaps = 19/229 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           D   + R               R+    + R       F+E+++  L   +P     ++ 
Sbjct: 121 DIRLKYRFLDLRNTESFDKFKLRSKASIACRNALDRLGFLEVETPILTRATPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ AG +K F  A  +R+ +     QPEFT +
Sbjct: 181 PSRVYPGSFYALPQ------SPQLFKQLLMCAGFDKYFQIARCFRDEDLRADRQPEFTQI 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARYAN 179
           +   +  + E ++K    I++         I + F+ +      E       +       
Sbjct: 235 DVEMSFCTQEDVIKVGEEILKDIFYACGHDIITPFRRMEYKDAMETYGNDKPDLRFDLPM 294

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +D+       +           ++   +        +IFS+  +++ E 
Sbjct: 295 VDVIDIFAKSNNEIFSTPAQNIKKNRAKAIKVPGGDNIFSKRQMQRFEE 343



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 13/136 (9%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            +    ++         +       +P       +    +   +  +++    +EL    
Sbjct: 423 KLEFLWVVNFPMFEQNDDGSYSAMHHPFTMPNNPDEEDLEDITSIAYDVVLNGVELGGGS 482

Query: 276 DELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
             +     Q+  F+     E ++++K            L  L+   P   G A+G DRL+
Sbjct: 483 IRIHKNDIQQKVFKLLKIDEAEQREKFG--------FLLDALSFGAPPHGGFAIGLDRLI 534

Query: 331 MLVTGANNINEVIWTP 346
           MLVT + +I +VI  P
Sbjct: 535 MLVTKSASIRDVIAFP 550


>gi|91228187|ref|ZP_01262169.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269967682|ref|ZP_06181732.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|91188176|gb|EAS74477.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269827769|gb|EEZ82053.1| aspartyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 592

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R            +Q +      E   +  +EA  R+   D     +  + 
Sbjct: 244 VRATTEKMVREM----------WQELLNVDLGEFPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 18/151 (11%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  +  W+ ++        E + G ++        P   +A           +  +
Sbjct: 415 KDLELTDESAWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT-E 315
           ++     E+      + +   Q   F+      +E Q K              L  L   
Sbjct: 475 DMVLNGYEVGGGSVRIHNADMQEAVFDILGITPEEQQLKFG----------FLLDALKFG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|260582585|ref|ZP_05850375.1| aspartyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094396|gb|EEW78294.1| aspartyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 588

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTARE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHDLWLDTIGVDLG----------KFPVMTWQEAMCRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLESDP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|146295716|ref|YP_001179487.1| aspartyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145409292|gb|ABP66296.1| aspartyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 595

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 7/193 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+ +   +R +  +N FIEI++  L   +P      R +     I    
Sbjct: 140 RRPDMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEG---ARDYLVPSRIF--P 194

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ AG +K F     +R+ +     QPEFT ++   +    + +
Sbjct: 195 GKFFALPQSPQLFKQLLMVAGFDKYFQIVKCFRDEDLRADRQPEFTQIDIEMSFVDVDDV 254

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++    +++                        E     +   R+  ++L    D     
Sbjct: 255 IEINERLLQTIFREMLGIDLKLPLPRLTYKEAMERFGTDKPDTRF-GMELVNLTDIVKHC 313

Query: 193 DRHLLYLQAQQAG 205
           +  +    A + G
Sbjct: 314 EFKVFADAANKGG 326



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 46/154 (29%), Gaps = 9/154 (5%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++  +          +    L E  E              P  E             
Sbjct: 418 EIARRLNLLDKSKFNLLWVTEFPLFEYSEEEGRYVAKHHPFTSPMDEDIEFLETDPARVR 477

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TE 315
           +K +++     E+      +     Q+  F      K   + E    D     L      
Sbjct: 478 SKAYDIVLNGTEIGGGSIRIHSTELQKRMF------KALGFTEERAQDRFGFLLEAFKYG 531

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            P   GIA GFDRL ML+ G ++I + I  P  +
Sbjct: 532 TPPHGGIAYGFDRLCMLLLGLDSIRDTIAFPKVK 565


>gi|308190115|ref|YP_003923046.1| aspartate--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624857|gb|ADN69162.1| aspartate--tRNA ligase [Mycoplasma fermentans JER]
          Length = 556

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 64/398 (16%), Positives = 116/398 (29%), Gaps = 91/398 (22%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  ++ ++ I  ++RE+  +N FI+I++  L   +P      R F      +D  
Sbjct: 125 RRPVMQQNIITKDKIMFAVREFMHQNDFIDIETPMLAKSTPEG---ARDFLVPTRNRDEF 181

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G EK + FA  +R+ +     QPEFT L+   +  + E  
Sbjct: 182 ---WALPQSPQLFKQLLMCSGFEKYYQFARCFRDEDSRKDRQPEFTQLDIETSFLNVEDF 238

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA-EAFARYANIDLGTTLDNPD- 190
            K    + +   +    KI +         +  +Y T   +    Y  +D+     N D 
Sbjct: 239 QKYIEKLFKHIFKSIGIKIKTPFPRVKYFDALRDYGTDKPDLRYDYKIVDINDFCLNTDF 298

Query: 191 -------------------QPDRHLLYLQAQ--QAGIRVAHDDTWSDIFSRILIEKIEP- 228
                              + D   L   A+  +A I         +I       K++  
Sbjct: 299 NIIKDAPSKRMLFVDTLITKKDFKDLEEIAKKNKANILFYFVYENGEIVHTNFANKVKDA 358

Query: 229 ----------NLGINCCTILDRYPAPESALANIYPADPRFTK---RFELYACNIELCNAC 275
                       G           A ++  A     + RF      + L           
Sbjct: 359 ALELVKNNKNKNGSYFIVANTYDHASQALGAVRVELNERFNYARKEWNLSWITDWPMFEY 418

Query: 276 DELLDPIEQRH----RFE---KEMQEKKKIYNETYPID---------------------- 306
           DE  +     H    RF    +E+ + +         D                      
Sbjct: 419 DEENNTWAAAHHPFTRFAHSLEELDKIEMKDVRALSYDLVLNGFELGSGSARIFDKKTQK 478

Query: 307 -----------------EDFLACL-TEMPQSSGIAMGF 326
                            + FL      +P   GI +G 
Sbjct: 479 KMFDLIGMSEKEQQSRFDWFLKAFDYGIPPHCGIGLGL 516


>gi|160872166|ref|ZP_02062298.1| aspartyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120965|gb|EDP46303.1| aspartyl-tRNA synthetase [Rickettsiella grylli]
          Length = 590

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 56/148 (37%), Gaps = 13/148 (8%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           +        +    L E  +              P   +A   +   +   ++ +++   
Sbjct: 424 IKEGWFPLWVVDFPLFEFEKEEKRWKALHHPFTAPKITNAAELLANPEACLSRAYDMVLN 483

Query: 268 NIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
             E+      + D   Q+  F++    E ++K+K           FL  L    P   G+
Sbjct: 484 GCEVGGGSIRIHDSAIQKAVFDRLTLSEAEQKEKFG--------FFLEALKFGCPPHGGM 535

Query: 323 AMGFDRLVMLVTGANNINEVIWTPFSQS 350
           A G DRLVML+T A +I +VI  P +Q+
Sbjct: 536 AFGLDRLVMLMTNAQSIRDVIAFPKTQT 563



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 65/200 (32%), Gaps = 17/200 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +    +R  +   +R ++ E  F+EI++  L   +P     ++            
Sbjct: 133 RRSEVQERFRRRTEMVKLIRHFYEEKGFLEIETPVLTKATPEGARDYLVPSRIYPGEFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT L+   +  S E 
Sbjct: 193 LPQ------SPQLFKQLLMIAGFDRYYQIVRCFRDEDLRADRQPEFTQLDMEMSFCSEED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++I    +                      ++ A A  RY +      +     
Sbjct: 247 IQTLNESLICYLFKKLLAVDLP---------CPFPRLSYATAMQRYGSDKPDLRIPFELV 297

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
               L+     +     A D
Sbjct: 298 DIADLVENITFKVFSDPAKD 317


>gi|332363358|gb|EGJ41143.1| aspartate--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 578

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 58/180 (32%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            E   R+   D    L    +  R    L   +  +  A D     +   +      +  
Sbjct: 374 QELLERFETKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLIDPSLLHFLWVVGWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +    +    D   +  +++     E+      + D   Q   F
Sbjct: 434 WNEDQNRYQAMHHPFTQGIFEDGQEPDQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEAMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        +  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 494 E-----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 548



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 70/190 (36%), Gaps = 7/190 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  + E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFANEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +      +           +   R+  ++L +  D     
Sbjct: 246 RALVEAMLKAVVKKTHGLELTEDFPTISYEEAMSRFGSDKPDTRF-GLELKSLTDLCQSN 304

Query: 193 DRHLLYLQAQ 202
           D  L+     
Sbjct: 305 DSLLIKKALD 314


>gi|291276850|ref|YP_003516622.1| aspartyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964044|emb|CBG39884.1| aspartyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 580

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 71/193 (36%), Gaps = 16/193 (8%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLYL 78
                R+ +   +R+      FIE+++  L   +P      R +     + D   +   L
Sbjct: 137 EIFKMRSEVCKLIRDTLHALDFIEVETPILTKATPEG---ARDYVVPSRVHD--GEFFAL 191

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
             SP+   + L+ +G ++ F  A  +R+ +     QPEF+ ++   +  + E +M+    
Sbjct: 192 PQSPQIFKQLLMVSGLDRYFQIAKCFRDEDLRADRQPEFSQIDVEMSFCTQEDVMEVAEI 251

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +I+             ++ N    +    +   EA  +Y +       + P      L+ 
Sbjct: 252 LIKNIF----------RSKNIEVQTPFRRMDYQEAMEKYGSDKPDLRFEMPLFEISDLMQ 301

Query: 199 LQAQQAGIRVAHD 211
             +      +A D
Sbjct: 302 DSSNAIFQSIAKD 314



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 50/345 (14%), Positives = 106/345 (30%), Gaps = 20/345 (5%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEI-DSMSLQYSPGNETHIRAFSTELI 67
           + + D    R+P     + I   +  +  +   +E+ +   L  +     +I    T   
Sbjct: 217 FRDEDLRADRQPEF---SQIDVEM-SFCTQEDVMEVAE--ILIKNIFRSKNIE-VQTPFR 269

Query: 68  IQDHIR-KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
             D+      Y    P+   +  L    + +   ++A        + +  F        +
Sbjct: 270 RMDYQEAMEKYGSDKPDLRFEMPLFEISDLMQDSSNAIFQSIAKDVKKNRFKA--LVVKN 327

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
             +    K          +   Q +   Q     P          E   +       ++ 
Sbjct: 328 GDHFFTRKTLGEAEEFVRKFGAQGLAYLQIKEEGPKGPLVKFISQENLGKILERVGASSG 387

Query: 187 D--NPDQPDRHLLYLQAQQAGIRVAHDDTW--SDIFSRILIEKIEPNLGINCCTILDRYP 242
           D       ++ L++    +  +++A D     SD +  + +                 +P
Sbjct: 388 DIIFFGAGEKSLVWDYMGRLRLKIAQDMGLIQSDRYEFLWVVDFPMFEKTEGKFSALHHP 447

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                  +    +   +  +++    +EL      +     Q+  FE     K+    E 
Sbjct: 448 FTMPKDIDNPDIETIKSIAYDIVLNGVELGGGSIRIHKEEIQQKVFEILGISKE----EA 503

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  L  L+   P   G A+G DRLVML+T + +I +VI  P
Sbjct: 504 EEKFGFLLEALSFGAPPHGGFAIGLDRLVMLLTHSPSIRDVIAFP 548


>gi|190407852|gb|EDV11117.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
          Length = 658

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 6/149 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +  + + + FL KR+ I   +R  F    F E+++  L + +P      R F 
Sbjct: 148 PPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATPEG---AREFL 204

Query: 64  TELIIQDHIRKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                +    KP +  L  SP+   + L+A+G  K +  A  +R+ +     QPEFT ++
Sbjct: 205 VPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQPEFTQVD 264

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQK 150
              A  + E +MK     +       ++K
Sbjct: 265 MEMAFANSEDVMKIIEKTVSGVWSKFSKK 293



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 10/115 (8%)

Query: 237 ILDRYPAPE----SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               +P                +    + ++L    +EL      + DP  Q + FE  +
Sbjct: 516 CSTHHPFTMVKLKDYEKLEKTPEKCLGRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDIL 575

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +      +  Y +    L       P  +G A+GFDR+  ++    +I +VI  P
Sbjct: 576 KI-----DNAYELFGHLLNAFDMGTPPHAGFAIGFDRMCAMICETESIRDVIAFP 625


>gi|68248924|ref|YP_248036.1| aspartyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81336665|sp|Q4QNM1|SYD_HAEI8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|68057123|gb|AAX87376.1| aspartyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 588

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHDLWLDTIGVDLG----------KFPVMTWQEAMRRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 49/151 (32%), Gaps = 18/151 (11%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
             G+    +     +    + E+ E              P   S               +
Sbjct: 417 DLGLTRLDEWQPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLEADPTSAVANAY 475

Query: 263 ELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACLT-E 315
           ++     E+      + DP  Q+  F      E++ +EK              L  L   
Sbjct: 476 DMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------FLLDALKFG 525

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 526 TPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|323302733|gb|EGA56539.1| Msd1p [Saccharomyces cerevisiae FostersB]
          Length = 658

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 6/149 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +  + + + FL KR+ I   +R  F    F E+++  L + +P      R F 
Sbjct: 148 PPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATPEG---AREFL 204

Query: 64  TELIIQDHIRKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                +    KP +  L  SP+   + L+A+G  K +  A  +R+ +     QPEFT ++
Sbjct: 205 VPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQPEFTQVD 264

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQK 150
              A  + E +MK     +       ++K
Sbjct: 265 MEMAFANSEDVMKIIEKTVSEVWSKFSKK 293



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 10/115 (8%)

Query: 237 ILDRYPAPE----SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               +P                +    + ++L    +EL      + DP  Q + FE  +
Sbjct: 516 CSTHHPFTMVKLKDYEKLEKTPEKCLGQHYDLVVNGVELGGGSTRIHDPRLQDYIFEDIL 575

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +      +  Y +    L       P  +G A+GFDR+  ++    +I +VI  P
Sbjct: 576 KI-----DNAYELFGHLLNAFDMGTPPHAGFAIGFDRMCAMICETESIRDVIAFP 625


>gi|145634684|ref|ZP_01790393.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268229|gb|EDK08224.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 588

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLQTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGLWLDTIGVDLG----------KFPVMTWQEAMRRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|312881483|ref|ZP_07741275.1| aspartyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370849|gb|EFP98309.1| aspartyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 592

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDLETSFMSADE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R   +                      +  +EA  R+   D     +  + 
Sbjct: 244 VRATTEKMVREMWQELLDVDLGQ----------FPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 16/150 (10%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  +  W+ ++        E + G ++        P   +A           +  +
Sbjct: 415 KDLELTDESAWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE-----KEMQEKKKIYNETYPIDEDFLACLT-EM 316
           ++     E+      + +   Q   F+      + Q+ K             L  L    
Sbjct: 475 DMVINGYEVGGGSVRIHNAEMQAAVFDILGIDAQEQQLKFG---------FLLDALKFGT 525

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 526 PPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|309805175|ref|ZP_07699227.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165409|gb|EFO67640.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 612

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 71/188 (37%), Gaps = 22/188 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R+ I  ++ +YF +  F+ I++ +L + +P     ++            
Sbjct: 133 RRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLVPSRVYPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQPEFTQVDLETSFLDEKG 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                 +  + IT  EA  +Y   D      +   
Sbjct: 247 VQIYTEGLLKKVMKDVMGIDIV---------TPIKRITWDEAMNKY-GSDKPDIRYDMHL 296

Query: 192 PDRHLLYL 199
            D   ++ 
Sbjct: 297 HDLSEIFK 304



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++ GI   H+  ++ +    L E  E +            P  +          
Sbjct: 408 LRRTFAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPH 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K++     Y      L  L  
Sbjct: 468 KAHARSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKER----AYEQFGFLLEALDM 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A+G DR  ML+   +NI +VI  P
Sbjct: 524 GFPPHAGLAIGLDRFAMLLAEKDNIRDVIAFP 555


>gi|119492003|ref|XP_001263496.1| asparaginyl-tRNA synthetase Slm5, putative [Neosartorya fischeri
           NRRL 181]
 gi|119411656|gb|EAW21599.1| asparaginyl-tRNA synthetase Slm5, putative [Neosartorya fischeri
           NRRL 181]
          Length = 549

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 58/395 (14%), Positives = 105/395 (26%), Gaps = 63/395 (15%)

Query: 15  HYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS---PGNETHIR-AF 62
           H R R          R+     L   F +     ++++    +  S      ET      
Sbjct: 149 HLRLRTPFNSVLSRFRSECLYQLGNVFRDAPTGGYVQVQPPLITSSDCEGAGETFTVLPR 208

Query: 63  ST----ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEF 117
            T    +       R P YL  S +   +   AA    ++  +  +R  +     H  EF
Sbjct: 209 ETIMDPKSEGNHFFRAPKYLTVSSQLHLEAY-AAELGNVWAISPTFRAEKSDTPRHLSEF 267

Query: 118 TMLEWYRAHESYEQLMKDCMNII------RCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            MLE           + D +  +      R       Q+I + +    +   +     V 
Sbjct: 268 YMLEAEMNFMDDLDSLTDAVEYVVRDLTRRLYQSSVGQEILAAKRSGESGQDDAGNGAVP 327

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG-IRVAHDDTWSDIFSRILIEKIEPNL 230
               R+ ++  G             L   A   G +   +  TW++       + I   +
Sbjct: 328 NLRQRWVDLIEGPRWRRITYTQAMELLEAAVARGEVSFEYAPTWTEGLQLEHEKYIVDVI 387

Query: 231 GINCCTILDRYPAPESALAN-IYPADPRFTKRF-----------ELYACNIELCNACDEL 278
                  +  YP              P   + F            L     E+       
Sbjct: 388 NRGQPVFVTDYPKAIKPFYMAPSHVAPGKEEDFRAPGETVACFDLLLPEVSEVAGGSLRE 447

Query: 279 LDPIEQRHRFEKEMQEKKKIYN-------------ETYPI------DEDF-----LACLT 314
                           K+++Y                 P+       ED       A L 
Sbjct: 448 HRLPNIIQNMRDHGLIKERLYPASGAGETPTTQTAPEQPLYPHLQPYEDLGHLQWYADLR 507

Query: 315 --EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                   G  +GFDR +  + G +++ +V+  P 
Sbjct: 508 RWGSAPHGGFGLGFDRFLSYLAGVSSVRDVVAFPR 542


>gi|62287555|sp|Q6FEH6|SYD_ACIAD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 592

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 73/209 (34%), Gaps = 22/209 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R Y  ++ F+++++  L   +P     ++     +      
Sbjct: 134 RRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLVPSRVQNGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-SYE 130
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +     +
Sbjct: 194 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLNDDD 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
            +       ++   E+   K           F + + +  +EA   YA+   DL   L  
Sbjct: 248 IMDLMEGMTVKLFDELLGIK-----------FDKFQRMPYSEAMRDYASDKPDLRIPLKL 296

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D  D          AG         + +
Sbjct: 297 VDVADLMQDVEFKVFAGPAKDPKGRIAAL 325



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY-PADPRFT-- 259
           + G  +            +     E     +       +P      +     A+P     
Sbjct: 415 KIGHDLKLVTCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEDVKANPGEALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 473 VAYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS----DEEAEEKFSFLLNALRYGAPP 528

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRL+ML+TGA++I +VI  P +++ +
Sbjct: 529 HGGLAFGLDRLIMLMTGASSIRDVIAFPKTKTAE 562


>gi|309807578|ref|ZP_07701530.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308169184|gb|EFO71250.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 546

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 71/188 (37%), Gaps = 22/188 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R+ I  ++ +YF +  F+ I++ +L + +P     ++            
Sbjct: 133 RRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLVPSRVYPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQPEFTQVDLETSFLDEKG 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                 +  + IT  EA  +Y   D      +   
Sbjct: 247 VQTYTEGLLKKVMKDVMGIDIV---------TPIKRITWDEAMNKY-GSDKPDIRYDMHL 296

Query: 192 PDRHLLYL 199
            D   ++ 
Sbjct: 297 HDLSDIFK 304


>gi|227488805|ref|ZP_03919121.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227091227|gb|EEI26539.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 610

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 63/187 (33%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R+   L  R+    + R    ++ F EI++ +L   +P      R F     +    
Sbjct: 142 RRERQADALRLRSKANRAARAVLDKHDFTEIETPTLTRSTPEG---ARDFLVPARL--KP 196

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 197 GTWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 256

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     I+     +   +I +              +T  EA  +Y +       D     
Sbjct: 257 IVLAEEILTALWGLIGYEIKT----------PIPRMTYKEAMEKYGSDKPDLRFDIQIVE 306

Query: 193 DRHLLYL 199
                  
Sbjct: 307 CTEFFKD 313



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +            P PES               +++     E+      +     Q   F
Sbjct: 454 HSSWTAVHHAFTSPKPESMDTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVF 513

Query: 289 E----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           +     E + ++K            L       P   GIA G+DR+V L+ G ++I +VI
Sbjct: 514 KVMGITEEEAREKFG--------FLLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVI 565

Query: 344 WTP 346
             P
Sbjct: 566 AFP 568


>gi|220929365|ref|YP_002506274.1| aspartyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|254781726|sp|B8I3F1|SYD_CLOCE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219999693|gb|ACL76294.1| aspartyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 593

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 70/190 (36%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +    R+Y+ +N F+EI++  L   +P     ++            
Sbjct: 140 RRPDMQRNLILRHRVAKVARDYYDQNGFLEIETPILIKSTPEGARDYLVPSRVHPGKFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +  + + 
Sbjct: 200 LPQ------SPQLYKQLLMVSGYDRYFQIAKCFRDEDLRADRQPEFTQIDIEMSFVNVDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++     ++ A + A               +    +  AEA  R+   D        + 
Sbjct: 254 VLEVNEGFVKKAFKEALGVDVE---------TPFTRMPYAEAMERF-GSDKPDIRFGMEL 303

Query: 192 PDRHLLYLQA 201
            +   L    
Sbjct: 304 VNMSDLVANC 313



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 48/362 (13%), Positives = 91/362 (25%), Gaps = 41/362 (11%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN-------ETHIRA 61
           + + D    R+P       I   +  +   +  +E++                 E     
Sbjct: 226 FRDEDLRADRQPEF---TQIDIEM-SFVNVDDVLEVN--------EGFVKKAFKEALGVD 273

Query: 62  FSTEL-IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ----GCLHQPE 116
             T    +        +    P+      L    + +                       
Sbjct: 274 VETPFTRMPYAEAMERFGSDKPDIRFGMELVNMSDLVANCGFKVFTDAVAMGGSVRAINA 333

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
               ++ R        +         A    +Q+     +       +     +  A A 
Sbjct: 334 KGCAKFSRKEIDALVDLVKTYKAKGMAWISISQENEIKSSFAKFMSEDEMKAILNRAQAE 393

Query: 177 YANIDLGTTLDNPDQPDR--HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
             ++       N    D    L    A++  I    +  +  +    L E  E +     
Sbjct: 394 AGDLICFVADKNNVVFDALGQLRLEIARKLDILNPDEFKFLWVTEFPLFEYDEEDQRWAA 453

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------ 288
                  P  E              K +++    +EL      +     Q   F      
Sbjct: 454 KHHPFTSPMDEDLQYLDTDPGRVRAKAYDMVLNGVELGGGSIRIHIQELQAKMFKMLGFT 513

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           E++   K     E +             P   G+A G DRLVML+   N+I +VI  P  
Sbjct: 514 EEDANRKFGFLLEAFK---------YGTPPHGGMAFGLDRLVMLMAKRNSIRDVIAFPKV 564

Query: 349 QS 350
           Q+
Sbjct: 565 QN 566


>gi|284925900|gb|ADC28252.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 583

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 77/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 179 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++      ++   +   ++I + F+ +      E       +     
Sbjct: 233 QIDIEMSFCEQKDVINVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDL 292

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 293 KFIDVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 343



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EQNDDGSYSAMHHPFTMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 495

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 496 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 545

Query: 342 VIWTP 346
           VI  P
Sbjct: 546 VIAFP 550


>gi|323306992|gb|EGA60276.1| Msd1p [Saccharomyces cerevisiae FostersO]
          Length = 640

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 6/149 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +  + + + FL KR+ I   +R  F    F E+++  L + +P      R F 
Sbjct: 126 PPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATPEG---AREFL 182

Query: 64  TELIIQDHIRKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                +    KP +  L  SP+   + L+A+G  K +  A  +R+ +     QPEFT ++
Sbjct: 183 VPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQPEFTQVD 242

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQK 150
              A  + E +MK     +       ++K
Sbjct: 243 MEMAFANSEDVMKIIEKTVSEVWSKFSKK 271



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 10/115 (8%)

Query: 237 ILDRYPAPE----SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               +P                +    + ++L    +EL      + DP  Q + FE  +
Sbjct: 494 CSTHHPFTMVKLKDYEKLEKTPEKCLGQHYDLVVNGVELGGGSTRIHDPRLQDYIFEDIL 553

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +      +  Y +    L       P  +G A+GFDR+  ++    +I +VI  P
Sbjct: 554 KI-----DNAYELFGHLLNAXDMGTPPHAGFAIGFDRMCAMICETESIRDVIAFP 603


>gi|297798554|ref|XP_002867161.1| tRNA synthetase class II family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312997|gb|EFH43420.1| tRNA synthetase class II family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 664

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 19/183 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              + +  ++ R+ +   +R    +   FIEI++  L   +P     ++     +     
Sbjct: 211 RRQQMKNNIVLRHNVVKLIRRCLEDRHGFIEIETPILSRSTPEGARDYLVPSRIQSGTFY 270

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K +  A  +R+ +     QPEFT L+   A    E
Sbjct: 271 ALPQ------SPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQPEFTQLDMEMAFMPME 324

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++K   ++IR                          +T A+A  RY   D   T  + +
Sbjct: 325 DMLKLNEDLIRKVFSEIKG---------IQLPDPFPRLTYADAMDRY-GSDRPDTRFDLE 374

Query: 191 QPD 193
             D
Sbjct: 375 LID 377



 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 46/142 (32%), Gaps = 16/142 (11%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           D +   I         E N        L  +P       ++          +++    +E
Sbjct: 504 DHSKHSILWVTDFPMFEWNEPEQRLEAL-HHPFTAPKPEDMDDLPSARALAYDMVYNGVE 562

Query: 271 LCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAM 324
           +      +     Q    E      +E + K     E   +           P   GIA 
Sbjct: 563 IGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDM---------GAPPHGGIAY 613

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           G DR+VM++ GAN+I +VI  P
Sbjct: 614 GLDRMVMMLGGANSIRDVIAFP 635


>gi|145631434|ref|ZP_01787204.1| aspartyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144982971|gb|EDJ90480.1| aspartyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 588

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHDLWLDTIGVDLG----------KFPVMTWQEAMRRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWKPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|167758800|ref|ZP_02430927.1| hypothetical protein CLOSCI_01142 [Clostridium scindens ATCC 35704]
 gi|167663540|gb|EDS07670.1| hypothetical protein CLOSCI_01142 [Clostridium scindens ATCC 35704]
          Length = 597

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 67/191 (35%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  LL R+ + +  R++  E  F+EI++  L + +P     ++            
Sbjct: 141 RRPDLQRNLLLRSRVATLTRQFLSEEGFLEIETPILGKSTPEGARDYLVPSRVHPGQFYG 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMCSGCDRYFQIAKCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                      +T  EA  RY   D   T    + 
Sbjct: 255 VIDVNERLLAKLFKDVLG---------VEVALPIPRMTWQEAMDRY-GSDKPDTRFGMEL 304

Query: 192 PDRHLLYLQAQ 202
            D   +    +
Sbjct: 305 TDVTEVVKDCE 315



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 50/155 (32%), Gaps = 5/155 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A+Q  +    +  +  I    L+E  E              P  E          
Sbjct: 416 LRLELARQMELLNKDEYKFLWITEFPLLEWSEEQNRYVAMHHPFTMPMEEDLNYLESDPG 475

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
               K +++     E+      +     Q   FE     K++            L     
Sbjct: 476 RVRAKAYDITLNGNEIGGGSVRIFQDDVQERMFEALGFTKEQ----AQEQFGFLLDAFKY 531

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +P  +G+A G DRLVML+   ++I +V+  P  +
Sbjct: 532 GVPPHAGLAYGLDRLVMLMAKEDSIRDVMAFPKVK 566


>gi|323335037|gb|EGA76327.1| Msd1p [Saccharomyces cerevisiae Vin13]
          Length = 658

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 6/149 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +  + + + FL KR+ I   +R  F    F E+++  L + +P      R F 
Sbjct: 148 PPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATPEG---AREFL 204

Query: 64  TELIIQDHIRKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                +    KP +  L  SP+   + L+A+G  K +  A  +R+ +     QPEFT ++
Sbjct: 205 VPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQPEFTQVD 264

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQK 150
              A  + E +MK     +       ++K
Sbjct: 265 MEMAFANSEDVMKIIEKTVSXXWSKFSKK 293



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 10/115 (8%)

Query: 237 ILDRYPAPE----SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               +P                +      ++L    +EL      + DP  Q + FE  +
Sbjct: 516 CSTHHPFTMVKLKDYEKLEKTPEKCLGXHYDLVVNGVELGGGSTRIHDPRLQDYIFEDIL 575

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +      +  Y +    L       P  +G A+GFDR+  ++    +I +VI  P
Sbjct: 576 KI-----DNAYELFGHLLNAFDMGTPPHAGFAIGFDRMCAMICETESIRDVIAFP 625


>gi|304312893|ref|YP_003812491.1| Aspartyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301798626|emb|CBL46858.1| Aspartyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 588

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 69/186 (37%), Gaps = 18/186 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  LL R  + S++R Y  E+ FI++++  L   +P     ++    T       
Sbjct: 132 RRPEMQAKLLFRAKVTSTMRRYLDEHGFIDVETPILTRATPEGARDYLVPSRTYPGSFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 192 LPQ------SPQLFKQLLMVAGIDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLTQDE 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + R   +                      +  +EA AR+ +      +     
Sbjct: 246 IMGIVEGMFRNLFKEVLGVEI----------PPLRRMPFSEAMARFGSDKPDLRIPLELV 295

Query: 192 PDRHLL 197
               L+
Sbjct: 296 EISDLM 301



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 52/158 (32%), Gaps = 22/158 (13%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-APESALANIYPADPRFT-- 259
           + G  +       +    +     E             +P    S        +P     
Sbjct: 415 KLGHDLGLVQGEWEALWVVDFPMFEET--DTGGWTALHHPFTSPSCSPESMLENPGAALS 472

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL 313
           + ++L    +EL      +     Q+  F       ++ QEK              L  L
Sbjct: 473 RAYDLVLNGVELGGGSIRIHQQDMQKAVFNLLGISTEDAQEKFG----------FLLDAL 522

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
               P   G+A G DRLVML+TG+  I +VI  P +Q+
Sbjct: 523 KFGAPPHGGLAFGLDRLVMLMTGSPTIRDVIAFPKTQT 560


>gi|148264250|ref|YP_001230956.1| aspartyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189082100|sp|A5G3L5|SYD_GEOUR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146397750|gb|ABQ26383.1| aspartyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 593

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 15/153 (9%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A+  G+       +  I    L+E  E              P  E              
Sbjct: 419 LAKSLGLLDKDTFNFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLEYVESDPGRCRA 478

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL 313
           K ++L     E+      +     Q   F      E++ + K     +            
Sbjct: 479 KAYDLVLNGNEIGGGSIRIHQEKIQSLMFKMLGHSEEDARTKFGFLLDAMD--------- 529

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DRL+ML+TG+++I +VI  P
Sbjct: 530 YGAPPHGGIAFGLDRLIMLLTGSDSIRDVIAFP 562



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 75/214 (35%), Gaps = 26/214 (12%)

Query: 9   WWNRDFHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
              +  +   RRP L    + R+ +    R+Y   N F+E+++  L   +P      R F
Sbjct: 131 LRLKHRYLDLRRPVLQENLILRSKVAQITRQYLTGNGFLELETPFLTKSTPEG---ARDF 187

Query: 63  STELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                I        Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++
Sbjct: 188 LVPSRINRG---EFYALPQSPQLFKQILMVSGFDRYFQVVRCFRDEDLRADRQPEFTQID 244

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    E ++     +I            +              +T AE+  R+  +D
Sbjct: 245 CEMSFIDREDIITVMEGLIARIFTETKGATVN---------LPIPRMTYAESIRRF-GVD 294

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
                   +  +   L    + AG +V  D    
Sbjct: 295 NPDLRFGLELVE---LSDIVKNAGFKVFADVVAG 325


>gi|91776734|ref|YP_546490.1| aspartyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123253951|sp|Q1GYN8|SYD_METFK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91710721|gb|ABE50649.1| aspartyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 594

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 73/196 (37%), Gaps = 19/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +   LR+      FIE+++  L   +P     ++            
Sbjct: 131 RRPAMQKNLMLRYRVAKVLRDQLDSQGFIEVETPMLTRSTPEGARDYLVPSRVHH----- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +  + E+
Sbjct: 186 -GQFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQPEFTQVDIETSFLNEEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M     +IR   +            + +  +    I+ AEA  RY +   D+  TL+  
Sbjct: 245 IMTIVEGMIRTMFKQV---------QDIDLPNPFPRISFAEAMNRYGSDKPDMRVTLEIT 295

Query: 190 DQPDRHLLYLQAQQAG 205
           +  D          AG
Sbjct: 296 ELTDVMKDVDFKVFAG 311



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G           +    + E  E N            P            
Sbjct: 411 ALRTKIGHEKGHVDGRAWAPLWVVDFPMFEHDEENDRWVALHHPFTSPKDGHEDLLASNP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               +K +++     E+      +     Q   F+     K+    E        L  L 
Sbjct: 471 GAALSKAYDMVLNGWEVGGGSVRIHKQEVQSKVFDALKISKE----EAQEKFGFLLDALQ 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DRLV L+ GA +I +VI  P
Sbjct: 527 YGAPPHGGLAFGLDRLVTLMAGAESIRDVIAFP 559


>gi|51244422|ref|YP_064306.1| aspartyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|62287551|sp|Q6AQS4|SYD_DESPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|50875459|emb|CAG35299.1| probable aspartyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 607

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 73/194 (37%), Gaps = 13/194 (6%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     LL R+    ++R Y  +N+F++I++  L   +P     ++            
Sbjct: 153 RRPAMARNLLLRHKAVQAIRNYLNDNEFLDIETPMLTRSTPEGARDYLVPSRVSAGKFYA 212

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    EQ
Sbjct: 213 LPQ------SPQLFKQLLMIAGMDRYYQIVKCFRDEDLRADRQPEFTQIDMELSFVDEEQ 266

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +I+   +       +    +       E         R+  ++L    +    
Sbjct: 267 IIEVTEGMIQTLFKETLDLDLTPPFAHITYADSMERFGCDRPDMRF-GMELVNLTEIAKS 325

Query: 192 PDRHLLYLQAQQAG 205
               +    A++ G
Sbjct: 326 CSFKVFRAIAEEGG 339



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 98/348 (28%), Gaps = 21/348 (6%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
           + + D    R+P       I   L  +  E Q IE+    +Q        +    T    
Sbjct: 239 FRDEDLRADRQPEF---TQIDMEL-SFVDEEQIIEVTEGMIQTLFKETLDLD--LTPPFA 292

Query: 69  Q--DHIRKPLYLQTSPEFSCKKLLAAGEE----KIFCFAHAWRNGEQGCLHQPEFTMLEW 122
                     +    P+      L    E      F    A                  +
Sbjct: 293 HITYADSMERFGCDRPDMRFGMELVNLTEIAKSCSFKVFRAIAEEGGTVRAINAKACAHF 352

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
            R                +  A V  +    +Q+     FSE E  ++AEA        L
Sbjct: 353 SRKDLDGLTEYAALFGA-KGLAWVKMKADGEWQSPIAKFFSEEERASIAEALDAQEGDLL 411

Query: 183 GTTLDNPDQPDR---HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
               D+     +    L    A++  +    +  +  +    L+E  E            
Sbjct: 412 FFGADSEKVVFQVLGELRLEMARRLDLLDKKEFNFVWVTDFPLMEYDEKEDRYQSIHHPF 471

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
             P  E         D   ++ ++L     E+      +     Q         +K+   
Sbjct: 472 TAPREEDLDLLETAPDKALSRAYDLVLNGTEIGGGSIRIHQRDVQARVLTALGIDKE--- 528

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L  L    P   G+A G DRL+ML+TG+++I  VI  P
Sbjct: 529 -EADEKFGFLLRALELGAPPHGGLAFGLDRLMMLITGSDSIRNVIAFP 575


>gi|37680472|ref|NP_935081.1| aspartyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|46577167|sp|Q7MJ74|SYD_VIBVY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|37199220|dbj|BAC95052.1| aspartyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 592

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 66/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSDQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R                      E   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMVREMWLELL----------NVDLGEFPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLVKDVDFKVFSGPANDEKGRV 318



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 18/151 (11%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  + TW+ ++        E + G ++        P   +A        P  +  +
Sbjct: 415 KDLGLTKEGTWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGLTAEELKANPAPAVSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT-E 315
           ++     E+      + +   Q   F+       E + K              L  L   
Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDILGIDADEQKLKFG----------FLLDALKFG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|150016423|ref|YP_001308677.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|189082090|sp|A6LTP1|SYD_CLOB8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149902888|gb|ABR33721.1| aspartyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 599

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 63/182 (34%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+    ++R+Y  EN F+++++  L   SP     ++          ++
Sbjct: 139 RRSDMHKIFEIRSKTTKAIRDYLEENNFLDVETPILSKSSPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 193 PGMFYALPQSPQIFKQLLMVSGFDRYYQIAKCFRDEDLRANRQPEFTQVDMELSFVEQED 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                    + +T  +A  +Y   D        + 
Sbjct: 253 IMAVNEGLIAHVFKKVAGVDVQ---------LPIKRMTFKDAMEKY-GSDKPDLRFGMEI 302

Query: 192 PD 193
            +
Sbjct: 303 TN 304



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 53/157 (33%), Gaps = 12/157 (7%)

Query: 195 HLLYLQAQQAG-IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
            L    A+Q   I+  ++  ++ I    L E  E       C      P  E        
Sbjct: 412 ALRLELAKQFDLIKDKNEFNFTWITEFPLFEYSEEEERYKACHHPFTAPMDEDLDFIESD 471

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---L 310
                +K ++L     EL      + D   Q   F       + +      ++E F   L
Sbjct: 472 PGNVRSKAYDLVLNGEELGGGSIRIHDTALQERMF-------RALGLTDEVVNERFGYLL 524

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   G+A G DR++M + G  NI +VI  P
Sbjct: 525 QAFKFGPPPHGGLAFGLDRMIMFLAGTENIKDVIAFP 561


>gi|325688127|gb|EGD30146.1| aspartate--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 578

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 58/180 (32%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            E   R+   D    L    +  R    L   +  +  A D     +   +      +  
Sbjct: 374 QELLERFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLIDPSLLHFLWVVDWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +    +    D   +  +++     E+      + D   Q   F
Sbjct: 434 WNEDQNRYQAMHHPFTQGIFEDGQEPDQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEAMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        +  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 494 E-----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 548



 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 80/238 (33%), Gaps = 21/238 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKAVVKKTHGLELTED---------FPTISYDEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           +   L    +   I+ A D         ++   +           L  Y         
Sbjct: 296 NLTDLCQSNESLLIKKALDS-----QEEVMGICVPDAASAFSKKQLSHYYQEMKEFGC 348


>gi|315452904|ref|YP_004073174.1| aspartyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131956|emb|CBY82584.1| aspartyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 584

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 71/193 (36%), Gaps = 16/193 (8%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLYL 78
                R+ +  ++R+      F+EI++  L   +P      R F     + D       L
Sbjct: 137 EIFKMRSRVAKAVRDCLDNLDFLEIETPMLAKTTPEG---ARDFLIPSRVHD--GAFFAL 191

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
             SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E +++    
Sbjct: 192 PQSPQLFKQLLMVAGMDRYYQIVKCFRDEDLRADRQPEFTQVDVEMSFCTQEDVLEVAQT 251

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +++   +    ++ +            + +   EA  +Y +       + P      L  
Sbjct: 252 LLQTVFKSVGVEVST----------PFKRMDYMEAMEKYGSDKPDLRFELPLVEVGDLFV 301

Query: 199 LQAQQAGIRVAHD 211
             + +    +A D
Sbjct: 302 DSSNEIFRSIASD 314



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P            +   +  +++    +EL      +     Q   FE          
Sbjct: 445 HHPFTMPKDLENTDLEEMRSIAYDIVLNGVELGGGSVRIHKEETQAKVFE----LLGISP 500

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E       FL  L    P  +G A+G DRLVML+    +I +VI  P
Sbjct: 501 QEAQEKFGFFLEALKYGAPPHAGFALGLDRLVMLLAKVPSIRDVIAFP 548


>gi|300813740|ref|ZP_07094057.1| putative aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300512148|gb|EFK39331.1| putative aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 316

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 74/210 (35%), Gaps = 31/210 (14%)

Query: 14  FHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRA 61
              + R            L  R+ I    R++F +N FIE+++  L   +P     ++  
Sbjct: 62  MRLKYRTLDLRKPSMLRNLKLRSKIYKITRDFFYDNGFIEVETPMLTKPTPEGARDYLVP 121

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                     + +      SP+   + L+ +G ++       +R+ +     QPEFT ++
Sbjct: 122 SRVNSGKFYALPQ------SPQLMKQLLMVSGLDRYIQITKCFRDEDLRANRQPEFTQID 175

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  + + +M      ++             + ++ +       +  +EA  R+  +D
Sbjct: 176 MELSFVTEDDVMSINEKFLQ---------KLFKEMLDIDIKLPLRRMKYSEAMDRF-GVD 225

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
                   +  D   +    + +G +V  +
Sbjct: 226 KPDLRFGMELKD---ISDIVKDSGFKVFEE 252


>gi|261252476|ref|ZP_05945049.1| aspartyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260935867|gb|EEX91856.1| aspartyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 592

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R   +                      +  +EA  R+   D     +  + 
Sbjct: 244 VRATTEKMVREMWQELLDVDLGQ----------FPIMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 52/144 (36%), Gaps = 6/144 (4%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + + ++  W+ ++        E + G ++        P   +A           +  ++
Sbjct: 416 DLELTNESAWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVNAEELKANPAAANSNAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           +     E+      + +   Q   F+    E     +E        L  L    P  +G+
Sbjct: 476 MVLNGYEVGGGSVRIHNAEMQSAVFDILGIEA----DEQQAKFGFLLDALKFGTPPHAGL 531

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DRLVML+ G  NI +VI  P
Sbjct: 532 AFGLDRLVMLLCGTENIRDVIAFP 555


>gi|145632568|ref|ZP_01788302.1| aspartyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986763|gb|EDJ93315.1| aspartyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 588

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHDLWLDTIGVDLG----------KFPVMTWQEAMRRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|227833220|ref|YP_002834927.1| Aspartyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184206|ref|ZP_06043627.1| aspartyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|254781728|sp|C3PGN5|SYD_CORA7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|227454236|gb|ACP32989.1| Aspartyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 606

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R+   L  R+    + RE    + F EI++ +L   +P      R F     +    
Sbjct: 134 RRERQHEALRLRSAANRAAREVLDSHDFTEIETPTLTRSTPEG---ARDFLVPARL--KP 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 189 GSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 248

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     I+    ++   +I +              +T A+A   Y +       D     
Sbjct: 249 IALAEEIVSALWKLIGYEIKT----------PIPRMTYADAMKYYGSDKPDLRFDIKIVE 298

Query: 193 DRHLLYL 199
                  
Sbjct: 299 CTEFFKD 305



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 38/119 (31%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +            P PE   +            +++     E+      + D   Q+  F
Sbjct: 446 HSKWTAVHHAFTSPKPEYLDSFDENPGEALAYAYDIVCNGNEIGGGSIRIHDQDVQKRVF 505

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +           E        L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 506 DVMGI----GEEEAQEKFGFLLDAFQFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 560


>gi|205355490|ref|ZP_03222261.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346724|gb|EDZ33356.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 615

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 77/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 151 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 210

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 211 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 264

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++      ++   +   ++I + F+ +      E       +     
Sbjct: 265 QIDIEMSFCEQKDVINVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDL 324

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 325 KFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 375



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 468 EQNDDGSYSAMHHPFTMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 527

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGANNI E
Sbjct: 528 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANNIRE 577

Query: 342 VIWTP 346
           VI  P
Sbjct: 578 VIAFP 582


>gi|328861275|gb|EGG10379.1| hypothetical protein MELLADRAFT_51822 [Melampsora larici-populina
           98AG31]
          Length = 567

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/355 (12%), Positives = 101/355 (28%), Gaps = 54/355 (15%)

Query: 12  RDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIR 60
            D    RR            L  R+ +  + R+ + +   IE+    +  +     + + 
Sbjct: 241 PDTLADRRHLVLRGETASSVLKVRSALLDAFRQSYAKLSLIEVTPPCMVQTQVEGGSTLF 300

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
           AF       D+  +  YL  S +   +  L +     FC   ++R  +     H  E+T 
Sbjct: 301 AF-------DYYGEKAYLTQSSQLYLETCLPS-LGDCFCIQESFRAEKSRTRRHLSEYTH 352

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEV------ANQKIFSFQNVNCNPFSEPEYITVAEA 173
           LE      ++E L+     +I    ++          + +       P    + +   EA
Sbjct: 353 LEAELGFLTFEDLLSHIEELICSTLDILLANPKVKALVETLNPDFKYPSRPFKRMDYQEA 412

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
            A                        +A++ G       T +D         +      N
Sbjct: 413 IAWL----------------NERGINKAEEDG---GGPFTIADDIPEAPERLMTDT--FN 451

Query: 234 CCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               L  +P    +        +P FT+  ++    +         +   +      + +
Sbjct: 452 VPIFLINFPKEIKAFYMKRISGNPNFTESVDVLMPGVGEIVGGSMRMTGYD------ELL 505

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +  +       P             +  G  +G +R +  +    ++ E    P 
Sbjct: 506 EAYRGAGIPAEPYYWYTDQRKYGTCEHGGYGLGVERFLAWLVKRPHVRECSLYPR 560


>gi|304440199|ref|ZP_07400089.1| aspartate--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371248|gb|EFM24864.1| aspartate--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 591

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 52/162 (32%), Gaps = 15/162 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+   +          I    L E  E              P  E         
Sbjct: 412 NLRNKVARDMNLIDDSKFELVWITEFPLFEYSEEENRYVAVHHPFTAPMDEDLDKVESDP 471

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K +++     E+      + D   Q+  F      E++ + K     E +     
Sbjct: 472 ANARAKAYDIVINGDEMGGGSIRINDREIQKKMFKALGFTEEDAENKFGFLLEAFK---- 527

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                   P   G+A G DRLVML T ++NI +VI  P +QS
Sbjct: 528 -----YGAPPHGGLAYGLDRLVMLFTNSSNIRDVIAFPKTQS 564



 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 65/186 (34%), Gaps = 9/186 (4%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           L+ R+      R++F EN FIE+++  L   +P     ++            + +     
Sbjct: 146 LMVRSKFYKVTRDFFAENGFIEVETPMLTKPTPEGARDYLVPSRVNPGKFYALPQ----- 200

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+ +G ++       +R+ +     QPEFT ++   +    E ++      
Sbjct: 201 -SPQLLKQLLMVSGLDRYIQITKCFRDEDLRANRQPEFTQIDLEMSFVDVEDVLDINEKF 259

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++ A +                    E   + +   R+  +++    D        +   
Sbjct: 260 LKVAFKEMLDIDIELPIKRMKYKEAMERYGIDKPDLRF-GMEIQNITDIVKDCGFGVFEQ 318

Query: 200 QAQQAG 205
            A++  
Sbjct: 319 SAKEFN 324


>gi|50083844|ref|YP_045354.1| aspartyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|49529820|emb|CAG67532.1| aspartyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 612

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 73/209 (34%), Gaps = 22/209 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ + + +R Y  ++ F+++++  L   +P     ++     +      
Sbjct: 154 RRPEMLDRLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDYLVPSRVQNGSFYA 213

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-SYE 130
           + +      SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +     +
Sbjct: 214 LPQ------SPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLNDDD 267

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
            +       ++   E+   K           F + + +  +EA   YA+   DL   L  
Sbjct: 268 IMDLMEGMTVKLFDELLGIK-----------FDKFQRMPYSEAMRDYASDKPDLRIPLKL 316

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D  D          AG         + +
Sbjct: 317 VDVADLMQDVEFKVFAGPAKDPKGRIAAL 345



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 10/154 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY-PADPRFT-- 259
           + G  +            +     E     +       +P      +     A+P     
Sbjct: 435 KIGHDLKLVTCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTLPKSSVEDVKANPGEALS 492

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q+  FE           E        L  L    P 
Sbjct: 493 VAYDMVLNGTEVGGGSLRIYTLEMQKAIFEALGIS----DEEAEEKFSFLLNALRYGAPP 548

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             G+A G DRL+ML+TGA++I +VI  P +++ +
Sbjct: 549 HGGLAFGLDRLIMLMTGASSIRDVIAFPKTKTAE 582


>gi|319775815|ref|YP_004138303.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|317450406|emb|CBY86622.1| aspartyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 588

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 65/184 (35%), Gaps = 20/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +    ++                       +   +T  EA  R+ +   DL   L+  
Sbjct: 245 VREIMERMVHDLWLDTIGVDLG----------KFPVMTWQEAMRRFGSDKPDLRNPLEMV 294

Query: 190 DQPD 193
           D  D
Sbjct: 295 DVAD 298



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 60/205 (29%), Gaps = 21/205 (10%)

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
           Q   +         +  E +        +   D   T  +       L     +  G+  
Sbjct: 366 QSPITKFLNEEVWKALAERVNAQTGDILFFGADKWQTTTD---AMGALRLKLGRDLGLTR 422

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
             +     +    + E+ E              P   S               +++    
Sbjct: 423 LDEWQPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLEADPTSAVANAYDMVING 481

Query: 269 IELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
            E+      + DP  Q+  F      E++ +EK              L  L    P  +G
Sbjct: 482 YEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------FLLDALKFGTPPHAG 531

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           +A G DRL ML+TG  NI +VI  P
Sbjct: 532 LAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|329117740|ref|ZP_08246457.1| aspartate--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326908145|gb|EGE55059.1| aspartate--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 582

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 24/225 (10%), Positives = 70/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 ETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ +G ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNSGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +     ++ +    +I    +       +         +        +   R+  +
Sbjct: 236 DLETSFLDEYEIQEIVEGMIAKVMKETKGIEVTLPFPRMAYDTAMNRYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQ-AQQAGIRVAHDDTWSDIFSRILIE 224
               T    +   +     +  +   ++   D        ++   
Sbjct: 296 LQDLTEVVKEVDFKVFSQAETVKGIVVKGKADSYSRKDIDKMTEY 340



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 50/158 (31%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +  A    +  +    + E  E              P  E+        
Sbjct: 402 ALRTRIAKEQNLVDADKFNFLWVIDWPMFEWSEEENRYMSAHHPFTLPTEETIEYLNGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     EL      +     Q + F      E++ +E+     E       
Sbjct: 462 AKVRAVAYDIVLNGYELGGGSLRINQKDMQANMFKALGFTEEDAKEQFGFLLEAMD---- 517

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 518 -----YGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|323493240|ref|ZP_08098369.1| aspartyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312506|gb|EGA65641.1| aspartyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 592

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R            +Q +      E   +  +EA  R+   D     +  + 
Sbjct: 244 VRATTEKMVRDM----------WQELLNVDLGEFPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 16/150 (10%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  + TW+ ++        E + G ++        P   +A           +  +
Sbjct: 415 KDLELTDESTWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE-----KEMQEKKKIYNETYPIDEDFLACLT-EM 316
           ++     E+      + +   Q   F+      + Q+ K             L  L    
Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDILGIDAQEQQLKFG---------FLLDALKFGT 525

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 526 PPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|259150054|emb|CAY86857.1| Msd1p [Saccharomyces cerevisiae EC1118]
          Length = 658

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 6/149 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +  + + + FL KR+ I   +R  F    F E+++  L + +P      R F 
Sbjct: 148 PPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNLDFTEVETPMLFKATPEG---AREFL 204

Query: 64  TELIIQDHIRKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                +    KP +  L  SP+   + L+A+G  K +  A  +R+ +     QPEFT ++
Sbjct: 205 VPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQPEFTQVD 264

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQK 150
              A  + E +MK     +       ++K
Sbjct: 265 MEMAFANSEDVMKIIEKTVSEVWSKFSKK 293



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 10/115 (8%)

Query: 237 ILDRYPAPE----SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               +P                +    + ++L    +EL      + DP  Q + FE  +
Sbjct: 516 CSTHHPFTMVKLKDYEKLEKTPEKCLGRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDIL 575

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +      +  Y +    L       P  +G A+GFDR+  ++    +I +VI  P
Sbjct: 576 KI-----DNAYELFGHLLNAFDMGTPPHAGFAIGFDRMCAMICETESIRDVIAFP 625


>gi|27365486|ref|NP_761014.1| aspartyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|320155869|ref|YP_004188248.1| aspartyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|29611878|sp|Q8DAN7|SYD_VIBVU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|27361634|gb|AAO10541.1| aspartyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|319931181|gb|ADV86045.1| aspartyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 592

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 66/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSDQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R                      E   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMVREMWLELL----------NVDLGEFPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLVKDVDFKVFSGPANDEKGRV 318



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 18/151 (11%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  + TW+ ++        E + G ++        P   +A        P  +  +
Sbjct: 415 KDLGLTKEGTWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGLTAEELKANPAPAISNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT-E 315
           ++     E+      + +   Q   F+       E + K              L  L   
Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDILGIDADEQKLKFG----------FLLDALKFG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|145628668|ref|ZP_01784468.1| aspartyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145638770|ref|ZP_01794379.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|144979138|gb|EDJ88824.1| aspartyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|145272365|gb|EDK12273.1| aspartyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309750260|gb|ADO80244.1| Aspartyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 588

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I S +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQRLKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++                       +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHDLWLDTIGVDLG----------KFPVMTWQEAMRRF-GSDKPDLRNPLEM 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKDVEFKVFNEPANNPNGRV 319



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ E              P   S        
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFERDEEGNLAAMHHPFTS-PKDFSPEQLEADP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  +++     E+      + DP  Q+  F      E++ +EK             
Sbjct: 468 TSAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGIDEEQQREKFG----------F 517

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 518 LLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|295695735|ref|YP_003588973.1| aspartyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295411337|gb|ADG05829.1| aspartyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 598

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 58/190 (30%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +   L R+     +R +   + F+EI++  L   +P     ++            
Sbjct: 142 RRPEMQRTFLLRHRAMQQVRRFLDLHGFMEIETPMLTRRTPEGARDYLVPSRVHPGQFYA 201

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ F     +R+ +     QPEFT ++   +     +
Sbjct: 202 LPQ------SPQLFKQLLMVSGFERYFQIVRCFRDEDLRADRQPEFTQIDIEMSFMPLTE 255

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
             +    ++    +                      I   EA  RY   D        + 
Sbjct: 256 FQELMERMMAELFQELLGVTVP---------LPFRRIPYDEAMLRY-GSDKPDLRFGLEI 305

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 306 RDVTEMVKTC 315



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       ++ I    L    E              P  E              + 
Sbjct: 422 RRLGLIDDASFAFAWITDFPLFSYDEEEKRWVAEHHPFTMPRWEDVDLMERDPARVRAQA 481

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           +++     E+      +     Q   F           +E        L       P   
Sbjct: 482 YDMVLNGYEIGGGSLRIYRRDIQEAMFRTLGFSM----DEAREKFGFLLEAFEYGAPPHG 537

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A GFDR++ML+ G ++I E I  P
Sbjct: 538 GMAFGFDRVIMLMAGKSSIRECIAFP 563


>gi|152996209|ref|YP_001341044.1| aspartyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189082103|sp|A6VXD0|SYD_MARMS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150837133|gb|ABR71109.1| aspartyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 590

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 63/172 (36%), Gaps = 18/172 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  +  R+ + S LR Y   N F++I++  L   +P     ++    T+      
Sbjct: 132 RRPEIQQKMRFRSKVTSVLRRYLDGNGFLDIETPILTRATPEGARDYLVPSRTQQGSFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +  S ++
Sbjct: 192 LPQ------SPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFMSEQE 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +M     +I    +                      +  +EA   Y +    
Sbjct: 246 IMAMTEEMIVGLFKELMDIDLGT----------FPRMPYSEAMETYGSDKPD 287



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 51/151 (33%), Gaps = 8/151 (5%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNL--GINCCTILDRYPAPESALANIYPADPRFTK 260
           + G  +            +     E     GI         P+         P     ++
Sbjct: 414 KLGDDLNLYTCKWAPLWVVDFPMFEETSDGGITAIHHPFTAPSCSPENLKASPLTA-LSQ 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
            +++     EL      +     Q   FE     K+    E        L  L    P  
Sbjct: 473 AYDMVLNGTELGGGSIRIHQSSMQETVFELLNITKE----EQEEKFGFLLDALKFGAPPH 528

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            G+A G DRLVML+TG+++I +VI  P +QS
Sbjct: 529 GGLAFGLDRLVMLMTGSSSIRDVIAFPKTQS 559


>gi|227542198|ref|ZP_03972247.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227182027|gb|EEI62999.1| aspartyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 610

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 63/187 (33%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R+   L  R+    + R    ++ F EI++ +L   +P      R F     +    
Sbjct: 142 RRERQADALRLRSKANRAARTVLDKHDFTEIETPTLTRSTPEG---ARDFLVPARL--KP 196

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 197 GTWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 256

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     I+     +   +I +              +T  EA  +Y +       D     
Sbjct: 257 IVLAEEILTALWGLIGYEIKT----------PIPRMTYKEAMEKYGSDKPDLRFDIQIVE 306

Query: 193 DRHLLYL 199
                  
Sbjct: 307 CTEFFKD 313



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +            P PES               +++     E+      +     Q   F
Sbjct: 454 HSSWTAVHHAFTSPKPESMDTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVF 513

Query: 289 E----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           +     E + ++K            L       P   GIA G+DR+V L+ G ++I +VI
Sbjct: 514 KVMGITEEEAREKFG--------FLLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVI 565

Query: 344 WTP 346
             P
Sbjct: 566 AFP 568


>gi|87118959|ref|ZP_01074857.1| aspartyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86165350|gb|EAQ66617.1| aspartyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 589

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 57/129 (44%), Gaps = 8/129 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  +  R+ + S LR Y  +N F++I++  L   +P     ++    T+      
Sbjct: 132 RRPEVQAKMRFRSKVTSVLRNYLDDNGFLDIETPILTRATPEGARDYLVPSRTQEGNFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    ++
Sbjct: 192 LPQ------SPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFMGEKE 245

Query: 132 LMKDCMNII 140
           +M    ++I
Sbjct: 246 IMSMTEDMI 254



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 60/177 (33%), Gaps = 16/177 (9%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL--GINCCTIL 238
           DL     + ++     L     + G  +            +     E     GI      
Sbjct: 392 DLIFFGSDSEKVVNEALGALRCKLGEDLELYTCEWAPLWVVDFPMFEETSDGGITAIHHP 451

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQE 294
              P+         P     ++ +++     EL      +     Q+  FE     E ++
Sbjct: 452 FTAPSCSVEELKANPLTA-LSQAYDMVLNGTELGGGSIRIHQSDMQQTVFELLNIDEAEQ 510

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++K            L  L    P   G+A G DRLVML+TG+ +I +VI  P +QS
Sbjct: 511 EEKFG--------FLLDALKFGAPPHGGLAFGLDRLVMLMTGSASIRDVIAFPKTQS 559


>gi|322382957|ref|ZP_08056789.1| aspartyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153077|gb|EFX45535.1| aspartyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 595

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 70/230 (30%), Gaps = 17/230 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 135 RRPEMQKTLMLRAKVVKIFRDYLDEQGFIDIETPILTKSTPEGARDYLVPSRVHPGEFFA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++   +  S +Q
Sbjct: 195 LPQ------SPQQFKQLLMVSGVERYYQIARCFRDEDLRADRQPEFTQVDIETSFLSQDQ 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L+     ++            S            + +T AEA  +Y +            
Sbjct: 249 LLDMMEELMVKLVRETVGVEVS---------RPFQRLTYAEAMDKYGSDKPDLRFGMELV 299

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               LL     +               +             +      RY
Sbjct: 300 DLSGLLADSEAKVFSAALKTGGEVKALNAKGCGTWSRKEIDDLAPFAMRY 349



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 49/157 (31%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L     ++ G+       ++ +    L+   E              P  E         
Sbjct: 408 NLRLKIGRRLGLIDDSIFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKDEDLDLFDSDP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                + ++L     E+      +     Q   F+     + + K K            L
Sbjct: 468 GQIRGQAYDLVLNGYEVGGGSQRIFKRDVQEKMFKALGFSQEEAKDKFG--------YLL 519

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   GIA GFDRLVML+ G +N+ E I  P
Sbjct: 520 DAFEYGTPPHGGIAFGFDRLVMLLAGRSNLRETIAFP 556


>gi|223985647|ref|ZP_03635696.1| hypothetical protein HOLDEFILI_03002 [Holdemania filiformis DSM
           12042]
 gi|223962391|gb|EEF66854.1| hypothetical protein HOLDEFILI_03002 [Holdemania filiformis DSM
           12042]
          Length = 403

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 87/295 (29%), Gaps = 34/295 (11%)

Query: 15  HYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R          R+++  ++ E+F +  F+ +++  +  +          F+     
Sbjct: 130 HLRPRSNTFNAVFRVRSVLAMAIHEFFQDQGFVYVNAPIITGNDAEGAGE--VFTVTTRD 187

Query: 69  QDHIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
             +  +  +     L  S +    +  A     ++ F   +R        H  EF M+E 
Sbjct: 188 DGNYEEDFFGKKANLTVSGQLQA-EAFAMAFRDVYTFGPTFRAENSNTTTHASEFWMVEP 246

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A    E  M    ++I+   +                F++    T+ E      N + 
Sbjct: 247 EIAFADLEDDMDLIEDMIKYCIQYV----LDNCPEEMKFFNQFIDNTLLERLNHVLNSEF 302

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                               +A  +  +  +W    +      +   +       L  YP
Sbjct: 303 VRMPYTE-------AIEHLLKAKKKFENPVSWGVDLNTEHERYLCEEVVKGPV-FLIDYP 354

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEMQEKK 296
               A       D +     +L      L  A  EL+   ++  R E  + + K+
Sbjct: 355 KDIKAFYMRMNDDGKTVAACDL------LVPAVGELVGGSQREERLEVLQNRMKE 403


>gi|323353267|ref|ZP_08087800.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322121213|gb|EFX92976.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 578

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 58/180 (32%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            E   R+   D    L    +  R    L   +  +  A D     +   +      +  
Sbjct: 374 QELLERFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLIDPSLLHFLWVVDWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +    +    D   +  +++     E+      + D   Q   F
Sbjct: 434 WNEDQNRYQAMHHPFTQGIFEDGQEPDQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEAMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        +  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 494 E-----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 548



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 80/238 (33%), Gaps = 21/238 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKAVVKKTHGLELTED---------FPTISYEEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           +   L        I+ A D+        ++   I           L  Y         
Sbjct: 296 NLTDLCQSNDSLLIKKALDN-----QEEVMGICIPDAASAFSKKQLSHYYQEMKEFGC 348


>gi|256830602|ref|YP_003159330.1| aspartyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256579778|gb|ACU90914.1| aspartyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 598

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 67/182 (36%), Gaps = 19/182 (10%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR+     L+ R+ +  S+R Y  E  F+EI++  L   +P      R F     +   
Sbjct: 148 LRRKAMADNLILRSRVSQSVRRYLDELGFLEIETPVLTKSTPEG---ARDFLVPSRVN-- 202

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+  G ++ F     +R+ +     QPEFT ++   +    EQ
Sbjct: 203 QGQFYALPQSPQLFKQLLMCGGMDRYFQIVKCFRDEDLRADRQPEFTQIDIEMSFVDEEQ 262

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    ++      A  +  S              +   +A A Y  +D          
Sbjct: 263 VMEMAEGMMARVLREALGQELS---------LPIPRMKYEQAMALY-GVDKPDIRFGLTL 312

Query: 192 PD 193
            D
Sbjct: 313 TD 314



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQR 285
                    +   +P            DP     + ++L     E+      + +P  Q+
Sbjct: 447 EWDPEAKRWVAMHHPFTAPKDMGALATDPGQAVARAYDLVLNGTEVGGGSIRIHNPETQQ 506

Query: 286 HRF------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
           H F      E+E Q K              L  L    P   GIA G DRL+ML+TGA +
Sbjct: 507 HMFSALGINEEEAQAKFG----------FLLDALVFGAPPHGGIAFGLDRLIMLLTGAKS 556

Query: 339 INEVIWTP 346
           I +VI  P
Sbjct: 557 IRDVIAFP 564


>gi|223984105|ref|ZP_03634257.1| hypothetical protein HOLDEFILI_01549 [Holdemania filiformis DSM
           12042]
 gi|223963899|gb|EEF68259.1| hypothetical protein HOLDEFILI_01549 [Holdemania filiformis DSM
           12042]
          Length = 580

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 65/178 (36%), Gaps = 19/178 (10%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDH 71
            RR P    L+ R+ +    R Y  ++ FIE+++  L + +P      R +     I   
Sbjct: 127 LRRAPIQNNLILRHKVTMLTRNYLSDHGFIEVETPILCKSTPEGA---RDYLVPSRIFK- 182

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             K   L  SP+   + L+  G EK F  A  +R+ +     QPEFT ++   +    EQ
Sbjct: 183 -GKFFALPQSPQIYKQLLMVGGIEKYFQIARCFRDEDLRADRQPEFTQIDIEMSFVDEEQ 241

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           +      +++                          +T  E  ARY +    T  D  
Sbjct: 242 VWTVVEGLMKEIFRNL----------KNVELDAFPRLTYNECMARYGSDKPDTRFDME 289



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 5/136 (3%)

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
           +  + E  E              P  E     +   +  +++ ++L     EL +    +
Sbjct: 426 NFPMFEYSEEEQRYVAAHHPFTSPNLEDVDKLMSDPENCYSRAYDLVLNGYELLSGSIRI 485

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
            D   Q   FE      +    E       F+       P   G+ +G +RLVM++ G +
Sbjct: 486 HDQHVQEKVFEAIGMSME----EAREKFGFFIDAFRYGTPPHGGVGIGLERLVMILAGTD 541

Query: 338 NINEVIWTPFSQSNQE 353
           NI +V+  P + S  +
Sbjct: 542 NIRDVVAFPKTASASD 557


>gi|328949312|ref|YP_004366649.1| aspartyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328449636|gb|AEB15352.1| aspartyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 610

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 74/205 (36%), Gaps = 12/205 (5%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNET-HIRAFSTELIIQD 70
            RR P    ++ R+ +  + RE+     F+EI++ + ++ +P     ++           
Sbjct: 143 LRREPMQHNIILRSAVTFATREFLTSKGFLEIETPTFIKSTPEGARDYLVPSRVHPGKFY 202

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G +K F  A  +R+ +     QPEFT ++   +  + E
Sbjct: 203 SLPQ------SPQLYKQLLMVSGFDKYFQIARCYRDEDARGDRQPEFTQIDMEMSFTNRE 256

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++     ++R   +              +     +     +   R+ ++ +       D
Sbjct: 257 EVLDTTEELMRHIFKKTLNYELPVHFDRISWDDAFDLYGSDKPDLRF-DMKMQDAAFMAD 315

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWS 215
             D +     A  A   +       
Sbjct: 316 LSDFNAFKAGAANADKNIERHKRSG 340



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 43/139 (30%), Gaps = 5/139 (3%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
             +  ++ I         E          +   P  +                ++L    
Sbjct: 443 KDEFHFAWIIDFPYFAWNEEENHWETEHHMFTLPQKKYWDTLESDPGSVKGDLYDLVLNG 502

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFD 327
            EL +    + DP  Q   FE     +++            +       P   GIA G D
Sbjct: 503 YELASGSMRINDPALQERIFEIVGYSRER----AEKAFGFLVQAFKFGAPPHGGIAPGLD 558

Query: 328 RLVMLVTGANNINEVIWTP 346
           RL+ML+    +I+EVI  P
Sbjct: 559 RLIMLMCHEESIHEVIAFP 577


>gi|325286549|ref|YP_004262339.1| aspartyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322003|gb|ADY29468.1| aspartyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 584

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 76/221 (34%), Gaps = 14/221 (6%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R +   N FIE+++  L   +P      R F     +    
Sbjct: 133 RRNPVKNNLIFRSKVSMEVRNFLSNNGFIEVETPYLIKSTPEG---ARDFVVPSRMN--- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E 
Sbjct: 187 EGEFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++    N+ R   +  N             F +   +   +       ++ G   D    
Sbjct: 247 ILNIFENLTRHLLKEING--VEVDKFPRMLFDDAMRLYGNDKPDIRFGMEFGELNDIAQH 304

Query: 192 PDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLG 231
            D  +        GI V   +        +++     P +G
Sbjct: 305 KDFGVFNNAELVVGIAVPGGNAYTRKEIDKLIDWVKRPQVG 345



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 48/157 (30%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R  ++     +    L+E  E     +        P P          
Sbjct: 404 ALRMELAERLGLRKPNEFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q   F+       + K++            +
Sbjct: 464 GAVKANAYDLVLNGNEIGGGSIRIHDKETQATMFKHLGFTPEEAKEQFG--------FLM 515

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   G+A G DRLV ++ G   I + I  P
Sbjct: 516 DAFQYGAPPHGGLAFGLDRLVSILGGQETIRDFIAFP 552


>gi|319778843|ref|YP_004129756.1| Aspartyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108867|gb|ADU91613.1| Aspartyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 598

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 49/158 (31%), Gaps = 6/158 (3%)

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
           L   A++ G           +    + E  E              P              
Sbjct: 418 LSDFAKEHGF-FEAGWKPLWVVDFPMFEYDEEEGRYTAAHHPFTSPKDGHEDLLESDPSK 476

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
            + K +++     E+      +     Q   F    +  K   +E        L  L   
Sbjct: 477 AYAKAYDMVLNGWEVGGGSVRIHKEEVQSKVF----RALKIGPDEAREKFGFLLDALQYG 532

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G+A G DRLV L+ GA +I +VI  P +Q  Q+
Sbjct: 533 APPHGGLAFGLDRLVTLMAGAESIRDVIAFPKTQRAQD 570



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 68/207 (32%), Gaps = 18/207 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R  +    R++  E  FI+I++  L   +P     ++            
Sbjct: 132 RRPVMQNNMMLRYRVAIESRKFLDELGFIDIETPMLTRSTPEGARDYLVPSRVHDGQFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 192 LPQ------SPQLFKQMLMVAGYDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEKE 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R   +                      +T  EA  R+   D      + + 
Sbjct: 246 IRDIFEAMMRHVFKAVKG---------IELADPFPVMTWDEAMGRF-GSDKPDMRISLEF 295

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L         + A +     + 
Sbjct: 296 TELTELMKSVDFKVFQSAANMVGGRVV 322


>gi|300863909|ref|ZP_07108827.1| Aspartyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300338095|emb|CBN53973.1| Aspartyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 595

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 19/189 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +  ++R +  +   FIE+++  L   +P     ++           
Sbjct: 136 RRDRMSRNLQLRHQVVKAIRRHLEDAENFIEVETPILTRSTPEGARDYLVPSRVNPGEWY 195

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E
Sbjct: 196 ALPQ------SPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSLE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++++    +     +              +       +T AEA  RY   D   T    +
Sbjct: 250 EILELNEGLTCHIFKTVKG---------IDLHLPFPRLTYAEAMGRY-GSDKPDTRFGLE 299

Query: 191 QPDRHLLYL 199
             D   L  
Sbjct: 300 LVDVSDLMK 308



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 38/130 (29%), Gaps = 5/130 (3%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              +    +              +P       +I        + ++L     E+      
Sbjct: 436 LLWVTDFPMFEWNADEKRLEALHHPFTAPHPDDINDLKTARAQAYDLVLNGTEVGGGSRR 495

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           +     Q   FE           E Y      L       P   GIA G DRLVML+ G 
Sbjct: 496 IYQREIQEKVFEAIGLS----TEEAYNKFGFLLDAFEYGTPPHGGIAYGLDRLVMLLAGE 551

Query: 337 NNINEVIWTP 346
            +I +VI  P
Sbjct: 552 ESIRDVIAFP 561


>gi|160915139|ref|ZP_02077352.1| hypothetical protein EUBDOL_01147 [Eubacterium dolichum DSM 3991]
 gi|158432938|gb|EDP11227.1| hypothetical protein EUBDOL_01147 [Eubacterium dolichum DSM 3991]
          Length = 580

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 70/201 (34%), Gaps = 27/201 (13%)

Query: 11  NRDFHYR------RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-H 58
             D   +      RRP + K    R+ I  SLR Y  ++ F+EI++  L + +P     +
Sbjct: 115 LEDTRLKYRYLDLRRPIMQKKLLMRHAITKSLRGYLDDHGFVEIETPVLGKSTPEGARDY 174

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G E+ + FA  +R+ +     Q +FT
Sbjct: 175 LVPSRVHPGCFYALPQ------SPQLFKQLLMISGFERYYQFARCFRDEDLRADRQTDFT 228

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   +  S  ++      ++    +                 +    ++  EA  RY 
Sbjct: 229 QLDMEMSFLSDVEIQTMMEEMLAKLMKDVKGLDIP---------TPFLRLSYEEAMNRYG 279

Query: 179 NIDLGTTLDNPDQPDRHLLYL 199
           +           Q    +   
Sbjct: 280 SDKPDNRFGMELQEITDIFTD 300



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 17/150 (11%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G++   + ++  +    + E  E +            P  E                ++
Sbjct: 410 LGLKKKDEFSFLWVTDFPMFEYSEEDGRYYAKHHPFTRPKQEDMKYIDEDPSKVHAIAYD 469

Query: 264 LYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL-TEM 316
           +     EL      + D   Q   FE      +++ E+             F+       
Sbjct: 470 VVLNGYELGGGSLRIYDSKMQEKMFEVMGFTEEQIHERFG----------FFVDAFQYGT 519

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DR+ M+++ +++I +VI  P
Sbjct: 520 PPHGGLAFGLDRIAMILSESDSIRDVIAFP 549


>gi|50842655|ref|YP_055882.1| aspartyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|62287550|sp|Q6A8J1|SYD_PROAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|50840257|gb|AAT82924.1| aspartyl-tRNA synthetase [Propionibacterium acnes KPA171202]
          Length = 606

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L+ R+ +  ++RE    + F +I++ +L   +P      R F     +    
Sbjct: 132 RRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEG---ARDFLVPARL--AP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +      +    ++             +  +    IT  EA  RY +        N    
Sbjct: 247 IALAEETMAACWKIIG----------VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITE 296

Query: 193 DRHLLYLQA 201
                   A
Sbjct: 297 VTDFFANTA 305



 Score = 91.6 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       ++      E+      +     Q   F          
Sbjct: 454 FTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGI----G 509

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G   I +VI  P
Sbjct: 510 PEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFP 558


>gi|296129655|ref|YP_003636905.1| aspartyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296021470|gb|ADG74706.1| aspartyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 591

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 68/198 (34%), Gaps = 27/198 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R  +  + R    E  F+E+++ +L   +P      R 
Sbjct: 119 EARLRHRYLDLRRQGPAHAIRLRAQVNRAARAVLDERGFVEVETPTLTRSTPEG---ARD 175

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+
Sbjct: 176 FVVPARL--APGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQPEFTQLD 233

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + +++   +++    ++    I +              +T A+A  RY   D
Sbjct: 234 VEASFVDQDDVIELAESVLTSLWDLIGYAIPT----------PIPRMTYADAMRRY-GTD 282

Query: 182 LGTTLDNPDQPDRHLLYL 199
                   +  D    + 
Sbjct: 283 KPDLRFGLELTDLTEYFA 300



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       +++     E+      +     Q+  F+         
Sbjct: 449 FTSPTPEWVDRFEEDPGAALAYAYDIVCNGNEIGGGSIRIHRRDVQQRVFQVMGI----G 504

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G+DR+V L+T +++I EVI  P
Sbjct: 505 EAEAQEKFGFLLDAFQFGAPPHGGIAFGWDRIVTLLTRSDSIREVIAFP 553


>gi|314987970|gb|EFT32061.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314989780|gb|EFT33871.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
          Length = 606

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L+ R+ +  ++RE    + F +I++ +L   +P      R F     +    
Sbjct: 132 RRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEG---ARDFLVPARL--AP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +      +    ++             +  +    IT  EA  RY +        N    
Sbjct: 247 IALAEETMAACWKIIG----------VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITE 296

Query: 193 DRHLLYLQA 201
                   A
Sbjct: 297 VTDFFANTA 305



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       ++      E+      +     Q   F          
Sbjct: 454 FTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGIS---- 509

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G   I +VI  P
Sbjct: 510 PEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFP 558


>gi|254443149|ref|ZP_05056625.1| aspartyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198257457|gb|EDY81765.1| aspartyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 600

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 58/183 (31%), Gaps = 13/183 (7%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGINCC 235
           +A  +         +       L  ++  + +  D      +    L+   E   G    
Sbjct: 397 FAASEWEQACAILGRTRLECAELLKKRGRLEIPKDQFDFLWVIEFPLMSFDEERGGYAAT 456

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
                 P  E              + ++L    +EL      +     Q+  FE      
Sbjct: 457 HHPFTAPVAEDVQYLDTDPKRVRGQHYDLVLNGVELGGGSIRIHQAAVQKKIFE------ 510

Query: 296 KKIYNETYPIDEDF---LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
             +      + E F   L       P   GIA G DRLVM++ G ++I +VI  P  ++ 
Sbjct: 511 DVLNIPADVVQERFGYMLEAFKYGAPPHGGIAFGLDRLVMILAGLSSIRDVIAFP--KTQ 568

Query: 352 QEE 354
           + +
Sbjct: 569 KGQ 571



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 28/201 (13%)

Query: 11  NRDFHYRRRPFLLKRNMI----------QSSLREYFVENQFIEIDSMSL-QYSPGNET-H 58
           N D   R R   L+R+ +            S+R+Y  EN F+++++  L + +P     +
Sbjct: 124 NEDMRLRYRYLDLRRSKMNKVVRLRHATSRSIRDYMDENAFVDVETPILFKSTPEGAREY 183

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ AG E+ +  A  +R+ +     Q EFT
Sbjct: 184 LVPSRINPGEFYALPQ------SPQQFKQMLMVAGVERYYQIARCFRDEDLRADRQMEFT 237

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   +    E +      ++         K      ++ +  +    ++  +A  RY 
Sbjct: 238 QLDIELSFIDREDMYSLIEGLM---------KKIWKDVLDVDLPTPFPRMSFEDAMNRY- 287

Query: 179 NIDLGTTLDNPDQPDRHLLYL 199
            +D   T    +  D    + 
Sbjct: 288 GVDKPDTRFGLEIQDFSEAFA 308


>gi|172039065|ref|YP_001805566.1| aspartyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|226710852|sp|B1WRQ9|SYD_CYAA5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|171700519|gb|ACB53500.1| aspartyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 598

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 19/183 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +  ++R Y   E QF+EI++  L   +P     ++           
Sbjct: 136 RRDRMAKNLQLRHAVVKAMRRYLEDEQQFMEIETPILTRSTPEGARDYLVPSRVNPGQWY 195

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E
Sbjct: 196 ALPQ------SPQLFKQLLMVSGCDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSEE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++     ++    +            N         +T  +A A+Y   D   T  +  
Sbjct: 250 EILDLNEGLVCHIFKAV---------KNIELPRPFPRLTYQDAMAKY-GTDRPDTRFDLT 299

Query: 191 QPD 193
             D
Sbjct: 300 LVD 302



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 42/130 (32%), Gaps = 5/130 (3%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I    +              +P     LA++        + ++L    +E+      
Sbjct: 436 LLWITEFPMFEWNADEKRLEALHHPFTAPNLADLNDLATARAQAYDLVYNGVEIGGGSLR 495

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           +     Q   FE      +    E Y      L       P   GIA G DRLVML+ G 
Sbjct: 496 IYQKEIQEKVFETIGLSLE----EAYNKFGFLLEAFEYGTPPHGGIAYGLDRLVMLLAGE 551

Query: 337 NNINEVIWTP 346
            +I +VI  P
Sbjct: 552 ESIRDVIAFP 561


>gi|327443566|gb|EGE90220.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
          Length = 606

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L+ R+ +  ++RE    + F +I++ +L   +P      R F     +    
Sbjct: 132 RRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEG---ARDFLVPARL--AP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +      +    ++             +  +    IT  EA  RY +        N    
Sbjct: 247 IALAEETMAACWKIIG----------VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITE 296

Query: 193 DRHLLYLQA 201
                   A
Sbjct: 297 VTDFFANTA 305



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       ++      E+      +     Q   F          
Sbjct: 454 FTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGI----G 509

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G   I +VI  P
Sbjct: 510 PEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFP 558


>gi|259500578|ref|ZP_05743480.1| aspartate-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191269|ref|ZP_07267523.1| aspartyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806585|ref|ZP_07700582.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|259167962|gb|EEW52457.1| aspartate-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308167005|gb|EFO69187.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 612

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 71/188 (37%), Gaps = 22/188 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R+ I  ++ +YF +  F+ I++ +L + +P     ++            
Sbjct: 133 RRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLVPSRVYPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQPEFTQVDLETSFLDEKG 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                 +  + IT  EA  +Y   D      +   
Sbjct: 247 VQTYTEGLLKKVMKDVMGIDIV---------TPIKRITWDEAMNKY-GSDKPDIRYDMHL 296

Query: 192 PDRHLLYL 199
            D   ++ 
Sbjct: 297 HDLSDIFK 304



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++ GI   H+  ++ +    L E  E +            P  +          
Sbjct: 408 LRRTFAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPH 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K++     Y      L  L  
Sbjct: 468 KAHARSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKER----AYEQFGFLLEALDM 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A+G DR  ML+   +NI +VI  P
Sbjct: 524 GFPPHAGLAIGLDRFAMLLAEKDNIRDVIAFP 555


>gi|295130733|ref|YP_003581396.1| aspartate--tRNA ligase [Propionibacterium acnes SK137]
 gi|291376034|gb|ADD99888.1| aspartate--tRNA ligase [Propionibacterium acnes SK137]
 gi|313771978|gb|EFS37944.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313807671|gb|EFS46158.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313810178|gb|EFS47899.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313818708|gb|EFS56422.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313830509|gb|EFS68223.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313833545|gb|EFS71259.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|314925087|gb|EFS88918.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314960376|gb|EFT04478.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314973509|gb|EFT17605.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314976189|gb|EFT20284.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314978650|gb|EFT22744.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314983789|gb|EFT27881.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|315080487|gb|EFT52463.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315084158|gb|EFT56134.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315085501|gb|EFT57477.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315088442|gb|EFT60418.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315096056|gb|EFT68032.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|327326336|gb|EGE68126.1| aspartate--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327330407|gb|EGE72156.1| aspartate--tRNA ligase [Propionibacterium acnes HL097PA1]
 gi|327331789|gb|EGE73526.1| aspartate--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327445770|gb|EGE92424.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327448247|gb|EGE94901.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|328753321|gb|EGF66937.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328760702|gb|EGF74268.1| aspartate--tRNA ligase [Propionibacterium acnes HL099PA1]
 gi|332675578|gb|AEE72394.1| aspartate--tRNA ligase [Propionibacterium acnes 266]
          Length = 606

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L+ R+ +  ++RE    + F +I++ +L   +P      R F     +    
Sbjct: 132 RRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEG---ARDFLVPARL--AP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +      +    ++             +  +    IT  EA  RY +        N    
Sbjct: 247 IALAEETMAACWKIIG----------VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITE 296

Query: 193 DRHLLYLQA 201
                   A
Sbjct: 297 VTDFFANTA 305



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       ++      E+      +     Q   F          
Sbjct: 454 FTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGI----G 509

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G   I +VI  P
Sbjct: 510 PEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFP 558


>gi|258621668|ref|ZP_05716699.1| aspartyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|258585899|gb|EEW10617.1| aspartyl-tRNA synthetase [Vibrio mimicus VM573]
          Length = 591

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   +        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFEGDDEGNVAAMHHPFTS-PLNLTPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|322386761|ref|ZP_08060385.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269043|gb|EFX51979.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 578

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 58/180 (32%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            +  AR+   D    L    +  R    L   +  +  A D     +   +      +  
Sbjct: 374 QDLQARFEAKDGDLILLVMAKKRRAQEALGHLRLEVAKALDLIDPSLLHFLWVVDWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +         D   +  +++     E+      + D   Q   F
Sbjct: 434 WNEDQNRYQAMHHPFTQGIFEEGQEPDQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEMMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        +  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 494 E-----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 548



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 88/278 (31%), Gaps = 27/278 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKAVVKKTHGLELT---------EAFPTISYEEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
               L  +     I+ A D         ++   +           L  +           
Sbjct: 296 SLTDLCQENDSLLIKKALDS-----QEEVMGICVPDAASAFSKKQLSHFYQEMKEFGC-S 349

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +  +L            E  D    + RFE 
Sbjct: 350 RLVSLKVEDGQLV--GDLASTFEAESQD---LQARFEA 382


>gi|289425292|ref|ZP_06427069.1| aspartate--tRNA ligase [Propionibacterium acnes SK187]
 gi|289154270|gb|EFD02958.1| aspartate--tRNA ligase [Propionibacterium acnes SK187]
 gi|313764303|gb|EFS35667.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313791990|gb|EFS40091.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313802060|gb|EFS43294.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313812794|gb|EFS50508.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313827646|gb|EFS65360.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313838881|gb|EFS76595.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314915293|gb|EFS79124.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314918157|gb|EFS81988.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314920233|gb|EFS84064.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314931756|gb|EFS95587.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314958053|gb|EFT02156.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314962646|gb|EFT06746.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314967489|gb|EFT11588.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|315077862|gb|EFT49913.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315098685|gb|EFT70661.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315101312|gb|EFT73288.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|327450631|gb|EGE97285.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327453291|gb|EGE99945.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|327454031|gb|EGF00686.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|328753289|gb|EGF66905.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
 gi|328754049|gb|EGF67665.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
          Length = 606

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L+ R+ +  ++RE    + F +I++ +L   +P      R F     +    
Sbjct: 132 RRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEG---ARDFLVPARL--AP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +      +    ++             +  +    IT  EA  RY +        N    
Sbjct: 247 IALAEETMAACWKIIG----------VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITE 296

Query: 193 DRHLLYLQA 201
                   A
Sbjct: 297 VTDFFANTA 305



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       ++      E+      +     Q   F          
Sbjct: 454 FTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGI----G 509

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G   I +VI  P
Sbjct: 510 PEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFP 558


>gi|327473502|gb|EGF18922.1| aspartate--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 578

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 59/181 (32%), Gaps = 9/181 (4%)

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIE 227
             E  AR+   D    L    +  R    L   +  +  A D     +   +      + 
Sbjct: 373 NQELLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLIDPSLLHFLWVVDWPLL 432

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                        +P  +    +    D   +  +++     E+      + D   Q   
Sbjct: 433 EWNEDQSRYQAMHHPFTQGIFEDGQEPDQFRSHAYDIVLNGYEIGGGSLRIHDRKSQEAM 492

Query: 288 FEKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           FE        +  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  
Sbjct: 493 FE-----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAF 547

Query: 346 P 346
           P
Sbjct: 548 P 548



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 90/278 (32%), Gaps = 27/278 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKAVVKKTHGLELTED---------FPTISYEEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
               L        I+ A D+        ++   +           L  Y           
Sbjct: 296 SLTDLCQSNDSLLIKKALDN-----QEEVMGICVPDAASAFSKKQLSHYYQEMKEFGC-S 349

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +  +L     +L +  +      E   RFE 
Sbjct: 350 RFASLKVENGQLVG---DLASTFEAEN--QELLARFEA 382


>gi|328675296|gb|AEB27971.1| Aspartyl-tRNA synthetase/Aspartyl-tRNA(Asn) synthetase [Francisella
           cf. novicida 3523]
          Length = 591

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 67/189 (35%), Gaps = 17/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 131 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 187 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +      F+         +  + +T A+A  +Y +      +     
Sbjct: 245 IMSTMERMIAGLFKETIGVEFT---------TPFQVMTFADAIDKYGSDKPDLRIPLEFV 295

Query: 192 PDRHLLYLQ 200
             +  +  +
Sbjct: 296 NIKEDMQNE 304



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 8/146 (5%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF--TKRFELY 265
           V  D  W+ ++        + +  +         P   S++  +  ++P    ++ +++ 
Sbjct: 421 VLFDKDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPK-VSSVEELERSNPEELSSRAYDMV 479

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAM 324
               E+      +     Q   F            E        L  L    P   GIA 
Sbjct: 480 INGYEVGGGSIRIHKQDIQAKVF----NLLGISDEEAREKFGFMLDALSYGTPIHGGIAF 535

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQS 350
           G DRL+ML+TG  NI +VI  P +Q+
Sbjct: 536 GVDRLIMLLTGTTNIRDVIAFPKTQT 561


>gi|294635827|ref|ZP_06714283.1| aspartate--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291090839|gb|EFE23400.1| aspartate--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 440

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 53/148 (35%), Gaps = 14/148 (9%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            +++  +  W+ ++        E    G+         P   S  A            ++
Sbjct: 265 DLKLTDETRWAPLWVIDFPMFEEDGEGGLAAMHHPFTSPRDISPEALKANPVGAIANAYD 324

Query: 264 LYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           +     E+      + +   Q   F+     E ++++K            L  L    P 
Sbjct: 325 MVMNGYEVGGGSVRIHNGAMQSAVFDILGINEQEQREKFG--------FLLDALKYGTPP 376

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A G DRLVML+TG  NI +VI  P
Sbjct: 377 HAGLAFGLDRLVMLLTGTENIRDVIAFP 404



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 60/185 (32%), Gaps = 19/185 (10%)

Query: 36  FVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
              + F++I++  L   +P     ++            + +      SP+   + L+ +G
Sbjct: 1   MDNHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSG 54

Query: 94  EEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS 153
            ++ +     +R+ +     QPEFT ++   +  S EQ+ +    + R            
Sbjct: 55  FDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMSAEQVREIMEELARALWLEIKGVDLG 114

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDT 213
                     +   +T AEA  R+   D     +  +  D   L             +D 
Sbjct: 115 ----------DFPVMTFAEAMRRF-GSDKPDLRNPLELVDVADLVKNVDFKVFSGPANDA 163

Query: 214 WSDIF 218
              + 
Sbjct: 164 KGRVI 168


>gi|260589626|ref|ZP_05855539.1| aspartate--tRNA ligase [Blautia hansenii DSM 20583]
 gi|331083058|ref|ZP_08332175.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260539866|gb|EEX20435.1| aspartate--tRNA ligase [Blautia hansenii DSM 20583]
 gi|330405060|gb|EGG84597.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 601

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 70/196 (35%), Gaps = 18/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ + + +R++  +  F+EI++ +L   +P     ++            
Sbjct: 141 RRPDLQKNMMLRSQVSTLVRQFLAKEGFLEIETPTLIKSTPEGARDYLVPSRVHPGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQIFKQLLMCSGYDRYFQIARCYRDEDLRADRQPEFTQIDMELSFVDVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                    E +T  +A  R+   D        + 
Sbjct: 255 VLDVNERMLAFLFKEVLGVEVQ---------LPIERMTWIDAMNRF-GSDKPDLRFGMEL 304

Query: 192 PDRHLLYLQAQQAGIR 207
            D   +    + A  +
Sbjct: 305 TDVSEVVKDCEFAVFK 320



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q  +   ++  +  I    L+E  E +            P  E         
Sbjct: 415 ALRLELAKQMDLLDKNEYRFVWITEFPLLEWSEEDERFTAMHHPFTMPMEEDLQYIDTEP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K+    E        L    
Sbjct: 475 GRVRAKAYDIVLNGNEIGGGSVRIFQDDVQEKMFEALGFTKE----EAQKQFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLVMLMAKVDSIRDVIAFPKVK 566


>gi|218562290|ref|YP_002344069.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|24212426|sp|Q9PHM7|SYD_CAMJE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|112359996|emb|CAL34785.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
          Length = 583

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 78/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 179 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++K     ++   +   ++I + F+ +      E       +     
Sbjct: 233 QIDVEMSFCEQKDVIKVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDL 292

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 293 KFIDVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 343



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EQNDDGSYSAMHHPFTMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 495

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 496 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 545

Query: 342 VIWTP 346
           VI  P
Sbjct: 546 VIAFP 550


>gi|320167572|gb|EFW44471.1| aspartate tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 654

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 67/194 (34%), Gaps = 17/194 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + + +  L  R+ +   +R    +  F+E+++ +L + +P      R F          
Sbjct: 208 RNPKLQHSLQVRSKVTQVIRSVLADEGFLEVETPTLFKRTPEG---AREFLVPTRTP--- 261

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG +K F FA  +R+ +     QPEFT L+   +      +
Sbjct: 262 GQFFALPQSPQQYKQMLMVAGVDKYFQFARCYRDEDLRADRQPEFTQLDMEMSFIRPIDI 321

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 I+  A    +                   +   EA  +Y  ID   T       
Sbjct: 322 QNVIEKIVARAWLEVHGMKLE---------LPFRRMPYQEAMEQY-GIDKPDTRFGMKLQ 371

Query: 193 DRHLLYLQAQQAGI 206
           +         QA +
Sbjct: 372 NLQACKELLSQASV 385



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 16/175 (9%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL-- 238
           D   ++       R  +  + ++ G  + + + +  ++        E +        +  
Sbjct: 451 DHAESVLQRLGKLRLAVAAELERLGHPLRNPNEFHFLWVEDFPLFTESDTAQAADGTMAL 510

Query: 239 --DRYPAPESALANIY--PADPRFTK--RFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               +P       + +    DPR  +   +++     EL      + D   Q  R  +E+
Sbjct: 511 EATHHPFTAPHPNDAHLVFTDPRKVRGLHYDIVVNGWELGGGSIRIHDSDMQ-ERLIREV 569

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  + T       L  L    P   GIA+GFDR++ ++  A ++ EVI  P
Sbjct: 570 L----GADITKF--SHLLKALRTGAPPHGGIALGFDRMMAILLSARSLREVIAFP 618


>gi|313825350|gb|EFS63064.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
          Length = 606

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L+ R+ +  ++RE    + F +I++ +L   +P      R F     +    
Sbjct: 132 RRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEG---ARDFLVPARL--AP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +      +    ++             +  +    IT  EA  RY +        N    
Sbjct: 247 IALAEETMAACWKIIG----------VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITE 296

Query: 193 DRHLLYLQA 201
                   A
Sbjct: 297 VTDFFANTA 305



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       ++      E+      +     Q   F          
Sbjct: 454 FTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGI----G 509

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G   I +VI  P
Sbjct: 510 PEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFP 558


>gi|251793073|ref|YP_003007799.1| aspartyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534466|gb|ACS97712.1| aspartyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 592

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  I   +R +  +N F++I++  L   +P     ++            
Sbjct: 131 RRPEMAQHLKIRAKITGFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFLTAPE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++             +Q++      +   +T  EA  R+   D     +  + 
Sbjct: 245 VREIMERMVHGL----------WQHILGVDLGKFLVMTWQEAMTRF-GSDKPDLRNPLEL 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        ++    +
Sbjct: 294 VDVADIVKNVEFKVFNEPANNPNGRV 319



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 14/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+    +     +    + E+ +              P   +        
Sbjct: 409 ALRLKLGRDLGLTRLDEWQPLWVIDFPMFERDDEGNLAAMHHPFTS-PKDFTPEQLEAEP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  +++     E+      + DP  Q+  F      E ++++K            L
Sbjct: 468 TDAVANAYDMVINGYEVGGGSVRIFDPKMQQTVFRILGINEQEQREKFG--------FLL 519

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 520 DALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 556


>gi|315124155|ref|YP_004066159.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017877|gb|ADT65970.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 583

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 78/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 179 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++K     ++   +   ++I + F+ +      E       +     
Sbjct: 233 QIDVEMSFCEQKDVIKVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDL 292

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 293 KFIDVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 343



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EQNDDGSYSAMHHPFTMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 495

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 496 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 545

Query: 342 VIWTP 346
           VI  P
Sbjct: 546 VIAFP 550


>gi|134302781|ref|YP_001122749.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166225347|sp|A4J0C7|SYD_FRATW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|134050558|gb|ABO47629.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 590

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 131 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 187 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  + +T A+A  +Y +      +     
Sbjct: 245 IMSTMERMIAGLFKETIG---------VEFATPFQVMTFADAIDKYGSDKPDLRIPLEFV 295

Query: 192 PDRHLLYLQAQQ 203
             +  +  +  +
Sbjct: 296 NIKEDMQNEEFK 307



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 10/141 (7%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRF--TKRFELYACNIE 270
             ++ + +         +       +P      S++ ++   +P    ++ +++     E
Sbjct: 425 KDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRAYDMVINGYE 484

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F           +E        L  L    P   GIA G DRL
Sbjct: 485 VGGGSIRIHKQDIQAKVF----NLLGISDDEAREKFGFMLDALSYGTPIHGGIAFGVDRL 540

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TG  NI +VI  P +Q+
Sbjct: 541 IMLLTGTTNIRDVIAFPKTQT 561


>gi|229520405|ref|ZP_04409830.1| aspartyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229342503|gb|EEO07496.1| aspartyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 591

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   S        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFESDDEGNVAAMHHPFTS-PLNLSPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|71894451|ref|YP_278559.1| aspartyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851239|gb|AAZ43848.1| aspartyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 566

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 87/257 (33%), Gaps = 18/257 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ +  ++RE+  + +F+EI++  L   +P      R F      Q++ 
Sbjct: 124 RRESMQNAISLRSEVFFAIREFLNKEKFLEIETPILAKATPEG---ARDFLVPTRSQNNF 180

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+A+G EK +  A  +R+ +     QPEFT L+   +       
Sbjct: 181 ---FALPQSPQLFKQLLMASGFEKYYQIARCFRDEDSRKDRQPEFTQLDMEVSFLEVSAF 237

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            K   N+ +   +              +  +  +     +   R+ ++ +    +   + 
Sbjct: 238 QKLVENLFKYVFKKVLNVDIQTPFQRLDFDTCIKDYGTDKPDLRF-DLKIQDINNYFQED 296

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDI--FSRIL--------IEKIEPNLGINCCTILDRYP 242
           +  ++  QA +  + +    T  D      I            +  N  +      ++ P
Sbjct: 297 NFEIIKKQASKRMLFINEQITKKDFKALEEIAKKNSANILFYFVLENGKVLHSNFANKAP 356

Query: 243 APESALANIYPADPRFT 259
                L   +       
Sbjct: 357 RDVEKLIKDHNFKNGTC 373



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 45/134 (33%), Gaps = 9/134 (6%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPE----SALANIYPADPRFTKRFELYACNIELCN 273
           FS I+   +      +       +P                +    K ++L     EL +
Sbjct: 407 FSWIINWPMFEFNEESQSYQAAHHPFTMFENTVEEFKTLSKNQIKAKSYDLVLNGFELGS 466

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVML 332
               +     Q   FE    +KK    E       FL      +P   GI +G DRL+M+
Sbjct: 467 GSARIYSKEVQELIFESLGMDKK----EQEEKFGFFLKAFDYGLPPHCGIGLGLDRLLMI 522

Query: 333 VTGANNINEVIWTP 346
           +   + I +VI  P
Sbjct: 523 LANKSTIRDVIAFP 536


>gi|89255468|ref|YP_512829.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115313996|ref|YP_762719.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156501393|ref|YP_001427458.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167009307|ref|ZP_02274238.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|290954556|ref|ZP_06559177.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295311996|ref|ZP_06802816.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|122325940|sp|Q0BPA2|SYD_FRATO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|123094553|sp|Q2A622|SYD_FRATH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225346|sp|A7N949|SYD_FRATF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|89143299|emb|CAJ78461.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115128895|gb|ABI82082.1| aspartate--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156251996|gb|ABU60502.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 590

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 131 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 187 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  + +T A+A  +Y +      +     
Sbjct: 245 IMSTMERMIAGLFKETIG---------VEFATPFQVMTFADAIDKYGSDKPDLRIPLEFV 295

Query: 192 PDRHLLYLQAQQ 203
             +  +  +  +
Sbjct: 296 NIKEDMQNEEFK 307



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 10/141 (7%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRF--TKRFELYACNIE 270
             ++ + +         +       +P      S++ ++   +P    ++ +++     E
Sbjct: 425 KDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRAYDMVINGYE 484

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F           +E        L  L    P   GIA G DRL
Sbjct: 485 VGGGSIRIHKQDIQAKVF----NLLGISDDEAREKFGFMLDALSYGTPIHGGIAFGVDRL 540

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TG  NI +VI  P +Q+
Sbjct: 541 IMLLTGTTNIRDVIAFPKTQT 561


>gi|15641179|ref|NP_230811.1| aspartyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|147674215|ref|YP_001216685.1| aspartyl-tRNA synthetase [Vibrio cholerae O395]
 gi|153819872|ref|ZP_01972539.1| aspartyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227081338|ref|YP_002809889.1| aspartyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505240|ref|ZP_04394750.1| aspartyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229511090|ref|ZP_04400569.1| aspartyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229518210|ref|ZP_04407654.1| aspartyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608259|ref|YP_002878907.1| aspartyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254848293|ref|ZP_05237643.1| aspartyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255745577|ref|ZP_05419525.1| aspartyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262158349|ref|ZP_06029465.1| aspartyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262170162|ref|ZP_06037850.1| aspartyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|298498730|ref|ZP_07008537.1| aspartyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|24212424|sp|Q9KSU0|SYD_VIBCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|172047395|sp|A5F263|SYD_VIBC3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781761|sp|C3LLL2|SYD_VIBCM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|9655641|gb|AAF94325.1| aspartyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126509582|gb|EAZ72176.1| aspartyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|146316098|gb|ABQ20637.1| aspartyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227009226|gb|ACP05438.1| aspartyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227013032|gb|ACP09242.1| aspartyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229344925|gb|EEO09899.1| aspartyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229351055|gb|EEO15996.1| aspartyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357463|gb|EEO22380.1| aspartyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229370914|gb|ACQ61337.1| aspartyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254843998|gb|EET22412.1| aspartyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255736652|gb|EET92049.1| aspartyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262021331|gb|EEY40044.1| aspartyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|262029790|gb|EEY48438.1| aspartyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|297543063|gb|EFH79113.1| aspartyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 591

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   S        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFESDDEGNVAAMHHPFTS-PLNLSPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|242212694|ref|XP_002472179.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728737|gb|EED82625.1| predicted protein [Postia placenta Mad-698-R]
          Length = 452

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 93/325 (28%), Gaps = 43/325 (13%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLY 77
             L  R  + SS R   V    +E+    +      G  T        L   D+  +P +
Sbjct: 154 AVLKLRAALLSSFRSSLVARDLLEVTPPCMVQTQVEGGAT--------LFKFDYYGQPAF 205

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  S +   +  L +    +FC   ++R        H  E+T LE   A  +++ LM   
Sbjct: 206 LTQSSQLYLETCLPS-LGDVFCVQESFRAENSHTRRHLSEYTHLEAELAFITFDDLMDHI 264

Query: 137 MNIIRCAAEVANQKIFSF------QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
             +I    +   +   S             P      ++  +A      I          
Sbjct: 265 EGVICDTVDRLLENPSSAALIKQLNPNFTAPARPFRRLSYVDA------IKWLNEHGIQH 318

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           + +     +   ++G     D    D  +     ++   LG      L  +PA   A   
Sbjct: 319 EAEDADGNVIKDESGNAKMVDHAVGDDIAEAAERRMTDILGT--PVFLYGFPAELKAFYM 376

Query: 251 IY-----PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                     P  T+  +L    +         +  ++     E     K++  +     
Sbjct: 377 KKMKREGEEGPVCTESCDLLMPGVGEIVGGSMRISDMD-----ELLAAYKREGIDPAPYY 431

Query: 306 ---DEDFLACLTEMPQSSGIAMGFD 327
              D+          +  G  +G +
Sbjct: 432 WFTDQR----KYGTSEHGGYGLGVE 452


>gi|157414294|ref|YP_001485160.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166979992|sp|A8G7J3|SYD_PROM2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157388869|gb|ABV51574.1| Aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 598

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 67/192 (34%), Gaps = 26/192 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L  R+ I    RE+     F E+++  L   +P      R 
Sbjct: 125 ELRLKYRYLDLRRGKLLENLKTRHKIIKVSREFLDNFGFTEVETPLLTKSTPEG---ARD 181

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     + +   +   L  SP+   + L+  G +K +  A  +R+ +     QPEFT L+
Sbjct: 182 FLVPARLSN--GEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQPEFTQLD 239

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  S E+++    ++I+   +            N N  +    ++   A   Y   D
Sbjct: 240 IEMSFVSEEEIISFNESLIKKIWKEVL---------NINFNNAFPRMSWQAAMDNY-GTD 289

Query: 182 LGTTLDNPDQPD 193
              T       D
Sbjct: 290 RPDTRYEMLLKD 301



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 14/154 (9%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA---NIYPADP 256
            A+   +       +  +    + E+ E              P    +          + 
Sbjct: 420 IAKDLNLIDKSKWNFLWVTDFPMFERNEDENRYEALHHPFCSPKNIKSKDSDKMQKEIEN 479

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL 313
                ++L    +EL      + +   QR   +        +      IDE F   +  L
Sbjct: 480 SIANAYDLVLNGMELGGGSLRIHEANLQREVLKT-------VGLTDKEIDEKFGFLIEAL 532

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA G DR+ ML+ GA++I E I  P
Sbjct: 533 EMGAPPHGGIAFGLDRITMLLIGADSIRETIAFP 566


>gi|125717428|ref|YP_001034561.1| aspartyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125497345|gb|ABN44011.1| Aspartyl-tRNA synthetase 1, putative [Streptococcus sanguinis SK36]
          Length = 578

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 59/180 (32%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            +  AR+   D    L    +  R    L   +  +  A D     +   +      +  
Sbjct: 374 QDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLIDPSLLHFLWVVDWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +    +    D   +  +++     E+      + D   Q   F
Sbjct: 434 WNEDQNRYQAMHHPFTQGIFEDGQEPDQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEAMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        +  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 494 E-----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 548



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 89/278 (32%), Gaps = 27/278 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY  +  F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNDLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKAVVKKTHSLELT---------EAFPTISYEEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
               L        I+ A D+       +++   +           L  Y           
Sbjct: 296 TLTDLCQSNDSLLIKKALDN-----QEKVMGICVPDAASAFSKKQLSHYYQEMKEFGC-S 349

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +  +L            E  D      RFE 
Sbjct: 350 RFANLKVENGQLV--GDLASTFEAESQD---LLARFEA 382


>gi|324990753|gb|EGC22689.1| aspartate--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 578

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 58/180 (32%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            +  AR+   D    L    +  R    L   +  +  A D     +   +      +  
Sbjct: 374 QDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLIDPSLLHFLWVVDWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +         D   +  +++     E+      + D   Q   F
Sbjct: 434 WNEDQNRYQAMHHPFTQGIFEEGQEPDQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEAMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        +  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 494 E-----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 548



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 90/278 (32%), Gaps = 27/278 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +  + 
Sbjct: 131 RREKMTQNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRV--YK 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  + E++
Sbjct: 186 NQFYALPQSPQILKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFANEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T  + +  
Sbjct: 246 RALVEAMLKSVVKKTHGLELTED---------FPTISYEEAMSRF-GSDKPDTRFDLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
               L    +   I+ A D+        ++   +           L  Y           
Sbjct: 296 SLTDLCQANESLLIKKALDN-----QEEVMGICVPDAASAFSKKQLSHYYQEMKEFCC-S 349

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +  +L            E  D      RFE 
Sbjct: 350 RFASLKVENGQLV--GDLASTFEAESQD---LLARFEA 382


>gi|302497507|ref|XP_003010754.1| hypothetical protein ARB_03456 [Arthroderma benhamiae CBS 112371]
 gi|291174297|gb|EFE30114.1| hypothetical protein ARB_03456 [Arthroderma benhamiae CBS 112371]
          Length = 575

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 93/331 (28%), Gaps = 24/331 (7%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
            +  +   + +     EY +++    I +       G  T   +         + ++  Y
Sbjct: 245 SQAIMAISSGVAQLFSEYMLKSGSRWIFT---SKITGAATEGGSGV---FEISYFKRKAY 298

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDC 136
           L  SP+   +  +A     +F     +R  +     H  EF  L++ R  + +   + D 
Sbjct: 299 LSQSPQLGKQMCIAGDMMSVFEIGPVFRAEDSNTHRHLTEFIGLDFERTFQKHYHEVLDF 358

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +        +  F  +                    +   +     L    +    +
Sbjct: 359 AENLLVFILSELKARFKDEIAVVQKSYPKAGEFKLPKDGKALRLKYMEALGFLKEAGVDV 418

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPAD 255
              +  +     A +     I                   ++D++P+          P D
Sbjct: 419 SEQERFENDFTTAMEKQLGRIIREKYD---------TDFYVVDKFPSAVRPFYTKSCPDD 469

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
           P F+  ++ +    E+ +    + D  E             +         ED++     
Sbjct: 470 PTFSNSYDFFMRGEEIMSGAQRINDAKELEE------AMVARGVEPNQEGFEDYINAFRQ 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                +G  +G +R+V     +  ++  I  
Sbjct: 524 GCAPHAGGGLGLNRIVQFFLDSAVVSMGILF 554


>gi|194324051|ref|ZP_03057826.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|194321948|gb|EDX19431.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 590

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 131 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 187 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  + +T A+A  +Y +      +     
Sbjct: 245 IMSTMERMIAGLFKETIG---------VEFATPFQVMTFADAIDKYGSDKPDLRIPLEFV 295

Query: 192 PDRHLLYLQAQQ 203
             +  +  +  +
Sbjct: 296 NIKEDMQNEEFK 307



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 50/141 (35%), Gaps = 10/141 (7%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRF--TKRFELYACNIE 270
             ++ + +         +       +P      S++ ++   +P    ++ +++     E
Sbjct: 425 KDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRAYDMVINGYE 484

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F            E        L  L    P   GIA G DRL
Sbjct: 485 VGGGSIRIHKQDIQAKVF----NLLGISDEEAREKFGFMLDALSYGTPIHGGIAFGVDRL 540

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TG  NI +VI  P +Q+
Sbjct: 541 IMLLTGTTNIRDVIAFPKTQT 561


>gi|90077058|dbj|BAE88209.1| unnamed protein product [Macaca fascicularis]
          Length = 246

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 87/264 (32%), Gaps = 27/264 (10%)

Query: 88  KLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV 146
             + A  EK+FC    +R  +     H  EF  L+   A   +   + + +         
Sbjct: 1   MCICADFEKVFCIGPVFRAEDSNTHRHLTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFK 60

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
             Q+ F  +    N     E     E   R                +        ++AG+
Sbjct: 61  GLQERFQTEIQTVNKQFPCEPFKFLEPTLR---------------LEYCEALAMLREAGV 105

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFELY 265
            +  +D  S    ++L   ++     +   ILD+YP           P +P+ +  ++++
Sbjct: 106 EMGDEDDLSTPNEKLLGHLVKEKYDTD-FYILDKYPLAVRPFYTMPDPRNPKQSNSYDMF 164

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
               E+ +    + DP     R          I  E     + ++       P  +G  +
Sbjct: 165 MRGEEILSGAQRIHDPQLLTER-----TLHHGIDLEKI---KAYIDSFRFGAPPHAGGGI 216

Query: 325 GFDRLVMLVTGANNINEVIWTPFS 348
           G +R+ ML  G +N+ +    P  
Sbjct: 217 GLERVTMLFLGLHNVRQTSMFPRD 240


>gi|224458012|ref|ZP_03666485.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|62287523|sp|Q5NIQ4|SYD_FRATT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|282158294|gb|ADA77685.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 590

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 131 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 187 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  + +T A+A  +Y +      +     
Sbjct: 245 IMSTMERMIAGLFKETIG---------VEFATPFQVMTFADAIDKYGSDKPDLRIPLEFV 295

Query: 192 PDRHLLYLQAQQ 203
             +  +  +  +
Sbjct: 296 NIKEDMQNEEFK 307



 Score = 91.6 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 10/141 (7%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRF--TKRFELYACNIE 270
             ++ + +         +       +P      S++ ++   +P    ++ +++     E
Sbjct: 425 KDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRAYDMVINGYE 484

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F           +E        L  L    P   GIA G DRL
Sbjct: 485 VGGGSIRIHKQDIQAKVF----NLLGISDDEAREKFGFMLDALSYGTPIHGGIAFGIDRL 540

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TG  NI +VI  P +Q+
Sbjct: 541 IMLLTGTTNIRDVIAFPKTQT 561


>gi|282853872|ref|ZP_06263209.1| aspartate--tRNA ligase [Propionibacterium acnes J139]
 gi|282583325|gb|EFB88705.1| aspartate--tRNA ligase [Propionibacterium acnes J139]
 gi|314981340|gb|EFT25434.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315092201|gb|EFT64177.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315092866|gb|EFT64842.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|315103613|gb|EFT75589.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
 gi|327327435|gb|EGE69211.1| aspartate--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 606

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L+ R+ +  ++RE    + F +I++ +L   +P      R F     +    
Sbjct: 132 RRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEG---ARDFLVPARL--AP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +      +    ++             +  +    IT  EA  RY +        N    
Sbjct: 247 IALAEETMAACWKIIG----------VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITE 296

Query: 193 DRHLLYLQA 201
                   A
Sbjct: 297 VTDFFANTA 305



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       ++      E+      +     Q   F          
Sbjct: 454 FTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGI----G 509

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G   I +VI  P
Sbjct: 510 PEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFP 558


>gi|260881133|ref|ZP_05403711.2| aspartate--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260849619|gb|EEX69626.1| aspartate--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 601

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 73/206 (35%), Gaps = 8/206 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                +  ++ R+ +   +R++F  N F+EI++  L + +P      R F     +    
Sbjct: 141 RRPEMQKNIILRHRVTKIMRDFFDRNGFLEIETPMLCKSTPEG---ARDFLVPSRVN--- 194

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L  AG EK F     +R+ +     QPEFT L+   +    + 
Sbjct: 195 PGEFYALPQSPQIFKQILQVAGFEKYFQIVRCFRDEDLRADRQPEFTQLDIEMSFMDQDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I+   + A               +  +     +   R+    +  +      
Sbjct: 255 ILTLMEEMIKELFKKAIGADVPTPFERMEWDTAMDKYGSDKPDLRFDMPLMDISEYVKGS 314

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +    +      ++    D ++DI
Sbjct: 315 SFKVFNSVIENGGMVKCIKVDGYADI 340



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 54/171 (31%), Gaps = 16/171 (9%)

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESAL 248
           D     L     ++ G+       +  +    +     E +               +  L
Sbjct: 409 DTALGQLRLEMGKERGLIDPDKLRFLWVVDFPMYEWSDEEHRFKAMHHPFTAPRDEDIDL 468

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNET 302
            N         K +++    +E+      + +   Q   FE      ++   K     + 
Sbjct: 469 LNTDRMGDVKAKAYDMVLNGVEIGGGSLRIYNADLQEKVFESLGLTPEQAHTKFGFMMDA 528

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           +             P   G+A G DRLVML+    +I +VI  P +QS ++
Sbjct: 529 FQ---------YGTPPHGGLAFGLDRLVMLMAKRPSIRDVIAFPKTQSARD 570


>gi|57236953|ref|YP_178754.1| aspartyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|62287516|sp|Q5HVD1|SYD_CAMJR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|57165757|gb|AAW34536.1| aspartyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058054|gb|ADT72383.1| Aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 583

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 77/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 179 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++      ++   +   ++I + F+ +      E       +     
Sbjct: 233 QIDIEMSFCEQKDVINVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFNL 292

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 293 KFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 343



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EQNDDGSYSAMHHPFTMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 495

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGANNI E
Sbjct: 496 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANNIRE 545

Query: 342 VIWTP 346
           VI  P
Sbjct: 546 VIAFP 550


>gi|314966612|gb|EFT10711.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
          Length = 606

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L+ R+ +  ++RE    + F +I++ +L   +P      R F     +    
Sbjct: 132 RRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEG---ARDFLVPARL--AP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +      +    ++             +  +    IT  EA  RY +        N    
Sbjct: 247 IALAEETMAACWKIIG----------VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITE 296

Query: 193 DRHLLYLQA 201
                   A
Sbjct: 297 VTDFFANTA 305



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       ++      E+      +     Q   F          
Sbjct: 454 FTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGI----G 509

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G   I +VI  P
Sbjct: 510 PEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFP 558


>gi|227555482|ref|ZP_03985529.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|227175378|gb|EEI56350.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22]
          Length = 303

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 46/146 (31%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    L E  E              P  E            + + 
Sbjct: 129 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVYAEA 188

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   FE     K+    E        L  L    P   
Sbjct: 189 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKE----EAQDQFGFLLDALDYGFPPHG 244

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DRL ML+ G  NI EVI  P
Sbjct: 245 GIALGLDRLAMLLAGEENIREVIAFP 270


>gi|81300122|ref|YP_400330.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|97196966|sp|Q31NM6|SYD_SYNE7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|81169003|gb|ABB57343.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 599

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 19/183 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +  ++R +   E QFIEI++  L   +P     ++           
Sbjct: 136 RRDRMNRNLQLRHQVVKAIRRFLEDEEQFIEIETPVLTKSTPEGARDYLVPSRVNP---- 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
              +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E
Sbjct: 192 --GEWFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFLSQE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++     +I    +                      +T AEA  RY   D   T    +
Sbjct: 250 EIIDLNERLIAHIFKTVKG---------IELPRPFPRLTYAEAMDRY-GSDRPDTRFGLE 299

Query: 191 QPD 193
             D
Sbjct: 300 LVD 302



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 49/149 (32%), Gaps = 15/149 (10%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G  +   D  +     ++   +              +P       ++        + ++
Sbjct: 422 LGKELGLIDPEALNLLWVVDFPMVEWNADEKRYEALHHPFTAPNPQDLEDLTTARAQAYD 481

Query: 264 LYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMP 317
           +    +E+      +     Q   FE      +E Q K     E +    DF       P
Sbjct: 482 IVLNGLEIGGGSLRIYQRDIQERVFETIGLSHEEAQAKFGFLLEAF----DF-----GTP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              GIA G DRLVML+TG  +I + I  P
Sbjct: 533 PHGGIAYGLDRLVMLLTGEESIRDAIAFP 561


>gi|283956054|ref|ZP_06373541.1| LOW QUALITY PROTEIN: aspartyl-tRNA synthetase [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|283792374|gb|EFC31156.1| LOW QUALITY PROTEIN: aspartyl-tRNA synthetase [Campylobacter jejuni
           subsp. jejuni 1336]
          Length = 575

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 77/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 111 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 170

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 171 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 224

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++      ++   +   ++I + F+ +      E       +     
Sbjct: 225 QIDVEMSFCEQKDVINVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDL 284

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 285 KFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 335



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       N    +   +  +++    +EL      +     Q+  F
Sbjct: 428 EQNDDGSYSAMHHPFTMPKNINEADLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 487

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 488 KLLNINEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 537

Query: 342 VIWTP 346
           VI  P
Sbjct: 538 VIAFP 542


>gi|262165437|ref|ZP_06033174.1| aspartyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262025153|gb|EEY43821.1| aspartyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 591

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   +        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFEGDDEGNVAAMHHPFTS-PLNLTPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|160878711|ref|YP_001557679.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|189082092|sp|A9KIA6|SYD_CLOPH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160427377|gb|ABX40940.1| aspartyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 598

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 70/190 (36%), Gaps = 22/190 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     L+ R+ + +  R++  +  F+EI++  L   +P     ++            
Sbjct: 141 RRPDLVRNLMLRSKVATLTRQFLSDEGFLEIETPMLTKSTPEGARDYLVPSRVHPGNFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIFKQLLMVSGYDRYFQIVKCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++   + +     S            + +T  EA  RY   D   T    + 
Sbjct: 255 VISVNERLLQKMFKESIGIDVS---------LPIQRMTWREAMDRY-GSDKPDTRFGMEL 304

Query: 192 PDRHLLYLQA 201
            +   L    
Sbjct: 305 KNVSELVKDC 314



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 51/156 (32%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+   +   +   +  +    L+E  E              P  E         
Sbjct: 415 NLRLEIARNLELLDKNTYNFLWVTEFPLLEYSEEEGRYTAMHHPFTMPMDEDLPLLETDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K+    E Y      L    
Sbjct: 475 GKVRAKAYDIVLNGTEVGGGSVRIFQNNVQEKMFEVLGFTKE----EAYERFGFLLNAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLVMLMAKEDSIRDVIAFPKVK 566


>gi|313816211|gb|EFS53925.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|314955558|gb|EFS99959.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|315105747|gb|EFT77723.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
 gi|315108667|gb|EFT80643.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
          Length = 588

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L+ R+ +  ++RE    + F +I++ +L   +P      R F     +    
Sbjct: 114 RRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEG---ARDFLVPARL--AP 168

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 169 GCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 228

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +      +    ++             +  +    IT  EA  RY +        N    
Sbjct: 229 IALAEETMAACWKIIG----------VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITE 278

Query: 193 DRHLLYLQA 201
                   A
Sbjct: 279 VTDFFANTA 287



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       ++      E+      +     Q   F          
Sbjct: 436 FTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGI----G 491

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G   I +VI  P
Sbjct: 492 PEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFP 540


>gi|229525778|ref|ZP_04415183.1| aspartyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229339359|gb|EEO04376.1| aspartyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 591

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   S        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFEGDDEGNVAAMHHPFTS-PLNLSPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|314923566|gb|EFS87397.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
          Length = 606

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L+ R+ +  ++RE    + F +I++ +L   +P      R F     +    
Sbjct: 132 RRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEG---ARDFLVPARL--AP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +      +    ++             +  +    IT  EA  RY +        N    
Sbjct: 247 IALAEETMAACWKIIG----------VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITE 296

Query: 193 DRHLLYLQA 201
                   A
Sbjct: 297 VTDFFANTA 305



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       ++      E+      +     Q   F          
Sbjct: 454 FTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGI----G 509

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G   I +VI  P
Sbjct: 510 PEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFP 558


>gi|262402476|ref|ZP_06079037.1| aspartyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262351258|gb|EEZ00391.1| aspartyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 591

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   +        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFEGDDEGNVAAMHHPFTS-PLNLTPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|153803294|ref|ZP_01957880.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124121174|gb|EAY39917.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 591

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   S        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFESDDEGNVAAMHHPFTS-PLNLSPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|300814717|ref|ZP_07094967.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511190|gb|EFK38440.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 197

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 53/161 (32%), Gaps = 13/161 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+   +   +      I    L E  E              P  E     +   
Sbjct: 19  NLRNKIARDLDLIDKNSYEMLWITDFPLFEYDEDEKRYVAKHHPFTSPKDEDLDIILSNP 78

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +    K +++     E+      + D   Q+  F+     +   K+K            L
Sbjct: 79  EKARAKAYDIVINGDEMGGGSIRINDQEIQKKMFKALGFTDEDAKEKFG--------FLL 130

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                  P   G+A G DRL ML TGA NI +VI  P +QS
Sbjct: 131 EAFKYGAPPHGGLAYGLDRLTMLFTGAENIRDVIAFPKTQS 171


>gi|150390123|ref|YP_001320172.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149949985|gb|ABR48513.1| aspartyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 591

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 72/189 (38%), Gaps = 21/189 (11%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           L+ R+ +   +R +  +  FIE+++  L   +P     ++            + +     
Sbjct: 145 LMLRHTVSKIVRNFLSDEGFIEVETPMLTKPTPEGARDYLVPSRVNPGKFFALPQ----- 199

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+ +G E+ F     +R+ +     QPEFT ++   +    + +++   N+
Sbjct: 200 -SPQLFKQLLMVSGMERYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVDQQDIIEMNENL 258

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +         K      ++ +       +   EA  RY   D      + +  D   L  
Sbjct: 259 L---------KKVFKDALDIDIQLPFPQMPYDEAMERY-GSDKPDIRFDFELVD---LGE 305

Query: 200 QAQQAGIRV 208
             +++G +V
Sbjct: 306 IVKESGFKV 314



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 50/159 (31%), Gaps = 9/159 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ G+    +     +    L E  E              P  E         
Sbjct: 411 HLRIEVAKRLGLLNKEEFKMLWVTDFPLFEYDEEENRYMAMHHPFTSPVDEDIPLLDTHP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
           +    K +++     E+      +     Q+  F      K       E +      L  
Sbjct: 471 EKVRAKAYDIVLNGYEIGGGSLRIFSSELQQKMF------KTLGFSEEEAWEKFGFLLEA 524

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                P   GIA G DRLVM++    NI +VI  P +Q+
Sbjct: 525 FKYGTPPHGGIAFGLDRLVMILAQEENIRQVIAFPKTQN 563


>gi|153217299|ref|ZP_01951052.1| aspartyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|153826030|ref|ZP_01978697.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|254291590|ref|ZP_04962380.1| aspartyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|297578768|ref|ZP_06940696.1| aspartyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|124113681|gb|EAY32501.1| aspartyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|149740250|gb|EDM54397.1| aspartyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|150422542|gb|EDN14499.1| aspartyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|297536362|gb|EFH75195.1| aspartyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 591

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   S        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFESDDEGNVAAMHHPFTS-PLNLSPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|309803214|ref|ZP_07697311.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|309810238|ref|ZP_07704083.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871698|ref|ZP_07731786.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872949|ref|ZP_07733009.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312875589|ref|ZP_07735590.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|325912183|ref|ZP_08174581.1| aspartate--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325912686|ref|ZP_08175069.1| aspartate--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|308164722|gb|EFO66972.1| aspartate--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308169510|gb|EFO71558.1| aspartate--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311088843|gb|EFQ47286.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311091471|gb|EFQ49855.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092640|gb|EFQ50996.1| aspartate--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|325476133|gb|EGC79301.1| aspartate--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325478107|gb|EGC81236.1| aspartate--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 612

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 71/188 (37%), Gaps = 22/188 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R+ I  ++ +YF +  F+ I++ +L + +P     ++            
Sbjct: 133 RRPSLQHSIILRSKILHAIHDYFDQEGFVYIETPTLGKSTPEGARDYLVPSRVYPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDKYYQIARCYRDEDLRGDRQPEFTQVDLETSFLDEKG 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   +                 +  + IT  EA  +Y   D      +   
Sbjct: 247 VQTYTEGLLKKVMKDVMGIDIV---------TPIKRITWDEAMNKY-GSDKPDIRYDMHL 296

Query: 192 PDRHLLYL 199
            D   ++ 
Sbjct: 297 HDLSDIFK 304



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++ GI   H+  ++ +    L E  E +            P  +          
Sbjct: 408 LRRTFAKETGIIPQHEFKFAWVVDWPLFEYDEGDQRWIAAHHPFTMPDDKGIELLETEPH 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K++     Y      L  L  
Sbjct: 468 KAHARSYDIVLNGYELGGGSIRIHKREIQEKMFKALGFTKER----AYEQFGFLLEALDM 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A+G DR  ML+   +NI +VI  P
Sbjct: 524 GFPPHAGLAIGLDRFAMLLAEKDNIRDVIAFP 555


>gi|218132937|ref|ZP_03461741.1| hypothetical protein BACPEC_00798 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991810|gb|EEC57814.1| hypothetical protein BACPEC_00798 [Bacteroides pectinophilus ATCC
           43243]
          Length = 612

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 64/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ + +  R +     F+EI++  L + +P     ++            
Sbjct: 154 RRPDIQANIMMRSRVATLTRAFLANEGFLEIETPMLCKSTPEGARDYLVPSRVHPGHFYA 213

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    + 
Sbjct: 214 LPQ------SPQLYKQLLMCSGYDRYMQIARCFRDEDLRADRQPEFTQIDMELSFVDIDD 267

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +            N +     + +T  EA  R+   D        + 
Sbjct: 268 VIDVNERLLAYLFKEVL---------NVDVQLPIQRMTWQEAMDRF-GSDKPDLRFGMEL 317

Query: 192 PD 193
            D
Sbjct: 318 HD 319



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 48/158 (30%), Gaps = 9/158 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A Q G+   ++  +  +      E  +              P  E         
Sbjct: 428 ALRIELAGQMGLLDKNEYKFLWVTEFPQFEWSDEENRYVAMHHPFTMPMEEDLDKLDTDL 487

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                K +++     E+      +     Q   F      +       E +      L  
Sbjct: 488 GAVRAKAYDIVLNGTEIGGGSVRIHQEDVQERMF------RALGFTNEEAHEKFGFLLDA 541

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
               +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 542 FKYGVPPHAGLAYGLDRLVMLMAKCDSIRDVIAFPKVK 579


>gi|206896522|ref|YP_002247111.1| aspartyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206739139|gb|ACI18217.1| aspartyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 575

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 17/193 (8%)

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
           P+ +   E +            +    P    L L   +    +  ++      +   + 
Sbjct: 361 PKSVLTEETWLEDGTYVFAAGDEWDVLPFLGELRLALGEYLGLLDDNEYKFVWVTSRPMF 420

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           +I  +  +         P   S             + +++    +E+      +     Q
Sbjct: 421 EIAEDGSLQAAHHPFTMPDVTSIDEIRKDPLKVRARAYDIVLNGVEIGGGSIRIHKADLQ 480

Query: 285 RHRFE------KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
           R  FE      ++++E+             FL  L+   P   GIA+GFDRLVML+ GA+
Sbjct: 481 RVVFEILGLSSEQIEERFG----------FFLDALSCGAPPHGGIALGFDRLVMLLCGAD 530

Query: 338 NINEVIWTPFSQS 350
           ++ +VI  P ++S
Sbjct: 531 SLRQVIAFPKTKS 543



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 30/205 (14%)

Query: 3   QIPSQPWWNRD--FHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P             + R            L  R+++ S +R Y     F EI++  L 
Sbjct: 107 PLPYDVNGEPSEFTKLKYRYVDIRHGELLANLKTRSVVSSVIRNYLSRKGFWEIETPYLT 166

Query: 51  Y-SPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +PG   +   F   +  Q       Y L  SP+   + L+ +G ++ F FA  +R+ +
Sbjct: 167 KYTPGGARN---FVVPVRQQPGY---FYALAESPQIFKQMLMISGVDRYFQFARCFRDED 220

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                QPEFT ++   +  + E +      +++                     +    +
Sbjct: 221 LRADRQPEFTQVDIEASFVTEEDIYDLVEGMMQELFREVLGVQVE---------TPFPRM 271

Query: 169 TVAEAFARYANIDLGTTLDNPDQPD 193
           T  EA + Y   D           D
Sbjct: 272 TYDEAMSLY-GSDKPDLRFQMTIDD 295


>gi|268609348|ref|ZP_06143075.1| aspartyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 592

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 69/183 (37%), Gaps = 21/183 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQD 70
            RR P    ++ R+ I    REYF EN F+EI++  + + +P     ++           
Sbjct: 136 LRREPLQRNIIMRHEIAKVTREYFYENGFLEIETPMMMKSTPEGARDYLIPSRVHPGKFY 195

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++    A  +R+ +     QPEFT ++   +    E
Sbjct: 196 ALPQ------SPQIYKQLLMIAGYDRYIQLARCFRDEDLRADRQPEFTQIDLEMSFVDAE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            + +     I+   +                 +    +T A+A  RY   D   T    +
Sbjct: 250 DIQECVEGFIQRVFKEVMGVDVP---------TPLPRLTFADAMNRY-GSDKPDTRFGFE 299

Query: 191 QPD 193
             D
Sbjct: 300 IQD 302



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +  + A++  +       +  I      E  E N            P  E         
Sbjct: 410 AIRLICAKKLDVIPEDQYNFLWITEMPFFEYDEDNNTWVAAHHPFTMPMEECLDYLDSDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI---YNETYPIDEDFLA 311
                K ++L     EL +    + D       FE + +  + +     E        + 
Sbjct: 470 ANVRAKAWDLVLNGTELSSGSMRITD-------FELQQKMFEALGMTDEEIQAKFGFLVD 522

Query: 312 C-LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G+ +G DRL M++  A+++ +V   P  Q+  E
Sbjct: 523 AYRYAAPPHGGMGIGLDRLAMIMCKADSLRDVTAFPKVQNASE 565


>gi|156743714|ref|YP_001433843.1| aspartyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|238686825|sp|A7NQH9|SYD_ROSCS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|156235042|gb|ABU59825.1| aspartyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 589

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 16/172 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R +  ++ R+ I   +R++     F+EI++  L   +P     ++            
Sbjct: 134 RRERMQRNIILRHRIVKFIRDFLDREGFVEIETPILIKSTPEGARDYLVPSRLHPGKFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A  +R+ +Q    QPEFT L+   +    + 
Sbjct: 194 LPQ------SPQQLKQLLMVAGFDRYFQIARCFRDEDQRADRQPEFTQLDMEMSFVDQDD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           ++     +                  +    +    +T AEA  R+ +    
Sbjct: 248 VLDIIERLFTALCREI--------TPHKRLLTPFPRLTFAEAMERFGSDKPD 291



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      +  +   +   W+ +    L+E  +     +        P  E         
Sbjct: 410 RLRREFGARLNLADPNTLAWAWVLDFPLVEWNDEEQRWDAVHHPFTAPKDEDLHLMDSDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                K ++L     E       +     Q+  F+    +++             L    
Sbjct: 470 GKVRAKAYDLILNGYEAGGGSIRIHQRDVQQRLFDLLGIDRET----AMRQFGHMLEAFE 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DR+ M++     I EV+  P
Sbjct: 526 YGAPPHGGIAPGIDRICMILADEVTIREVMAFP 558


>gi|294341509|emb|CAZ89926.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Thiomonas sp. 3As]
          Length = 599

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 70/184 (38%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +  ++R +     FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLKLRYRVAMAVRRFLDGQGFIDIETPMLTKSTPEGARDYLVPSRVHDGEFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 193 LPQ------SPQLFKQMLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +IR   +            +    +    +T AEA AR+ +   DL   ++  
Sbjct: 247 IRDLFETMIRGVFKDVL---------DIELATPYPVMTYAEAMARFGSDKPDLRVKMEFT 297

Query: 190 DQPD 193
           +  D
Sbjct: 298 ELTD 301



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 45/146 (30%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +  G+   +      +    + E  E N            P            +    K 
Sbjct: 424 KSHGL-FENVWKPLWVVDFPMFEFDEDNQRWAAVHHPFTAPKDGHEELMDTAPEKCIAKA 482

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     E+      +     Q   F       K   +E        L  L    P   
Sbjct: 483 YDMVLNGWEIGGGSVRIHRAEVQSKVF----SALKIGPDEARAKFGFLLDALQYGAPPHG 538

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DR+V ++TGA +I +VI  P
Sbjct: 539 GIAFGLDRIVTMMTGAQSIRDVIAFP 564


>gi|323499465|ref|ZP_08104436.1| aspartyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323315452|gb|EGA68492.1| aspartyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 592

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 68/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R   +                  +   +  +EA  R+   D     +  + 
Sbjct: 244 VRATTEKMVRDMWQELLDVDLG----------DFPVMPFSEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 8/146 (5%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  ++ W+ ++        E + G ++        P   +A           +  +
Sbjct: 415 KDLELTDENAWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVNAEELKANPAAANSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACLT-EMPQSS 320
           ++     E+      + +   Q   F+        I  E   +   FL   L    P  +
Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFDIL-----GIDAEEQQLKFGFLLDALKFGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DRLVML+ G  NI +VI  P
Sbjct: 530 GLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|296137210|ref|YP_003644452.1| aspartyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295797332|gb|ADG32122.1| aspartyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 599

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 70/184 (38%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +  ++R +     FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLKLRYRVAMAVRRFLDGQGFIDIETPMLTKSTPEGARDYLVPSRVHDGEFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 193 LPQ------SPQLFKQMLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLSEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +IR   +            N    +    +T AEA AR+ +   DL   ++  
Sbjct: 247 IRDLFETMIRGVFKDVL---------NIELANPYPVMTYAEAMARFGSDKPDLRVKMEFT 297

Query: 190 DQPD 193
           +  D
Sbjct: 298 ELTD 301



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 45/146 (30%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +  G+   +      +    + E  E N            P            +    K 
Sbjct: 424 KSHGL-FDNVWKPLWVVDFPMFEFDEDNQRWAAVHHPFTAPKDGHEELMDTAPEKCIAKA 482

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     E+      +     Q   F       K   +E        L  L    P   
Sbjct: 483 YDMVLNGWEIGGGSVRIHRAEVQSKVF----SALKIGPDEARAKFGFLLDALQYGAPPHG 538

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DR+V ++TGA +I +VI  P
Sbjct: 539 GIAFGLDRIVTMMTGAQSIRDVIAFP 564


>gi|307150082|ref|YP_003885466.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306980310|gb|ADN12191.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 595

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 69/191 (36%), Gaps = 19/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +  ++R Y   +  FIE+++  L   +P     ++           
Sbjct: 136 RRERMMNNLKLRHQVVKAMRRYLEDQQNFIEVETPILTRSTPEGARDYLVPSRANPGKWY 195

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S +
Sbjct: 196 ALPQ------SPQLFKQLLMVSGVDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSLD 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++++    +I    +            N +       +T  +A  +Y   D   T    +
Sbjct: 250 EILELNEGLIAHIFKST---------KNIDIPLPLPRLTYTDAMGKY-GTDRPDTRFGLE 299

Query: 191 QPDRHLLYLQA 201
             D   +    
Sbjct: 300 LVDVSEIVKDC 310



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 39/130 (30%), Gaps = 5/130 (3%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              +    +              +P       +++         +++    IE+      
Sbjct: 436 LLWVTDFPMFEWNAEEKRLEALHHPFTAPKPEDLHDLSHARALAYDMVFNGIEIGGGSLR 495

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           +     Q   F       +    E Y      L       P   GIA G DRLVML+ G 
Sbjct: 496 IYQRDIQEKVFATIGLSME----EAYSKFGFLLEAFEYGTPPHGGIAYGLDRLVMLLAGE 551

Query: 337 NNINEVIWTP 346
            +I +VI  P
Sbjct: 552 ESIRDVIAFP 561


>gi|332686837|ref|YP_004456611.1| aspartyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370846|dbj|BAK21802.1| aspartyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 588

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 71/199 (35%), Gaps = 21/199 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    +  R+ +  ++R Y  +N FI+I++  L   SP     ++            
Sbjct: 134 RRPKMTKNIKLRHQVTKAIRNYLDDNAFIDIETPYLAKSSPEGARDYLVPSRIHAGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 194 LPQ------SPQIFKQLLMGAGFDRYYQLVRCFRDEDLRGDRQPEFTQVDIETTFLTAEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +       +              I+  EA AR+   D   T    + 
Sbjct: 248 IQTMTEEMIERVMKETKGIEVT---------LPFPRISYDEAMARF-GSDKPDTRFGMEL 297

Query: 192 PDRHLLYLQAQQAGIRVAH 210
            D   +   AQ+   +V  
Sbjct: 298 ID---IIDIAQKIDFKVFK 313



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 46/136 (33%), Gaps = 15/136 (11%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +    L E  E              P  +     +   +  + + +++     EL     
Sbjct: 429 VVDWPLFEYSEEQDRYIAAHHPFTQPQAQDIQWLLNDPEKVYAEAYDIVLNGYELGGGSL 488

Query: 277 ELLDPIEQRHRFEK-----EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLV 330
            +     Q   FE      E+ E++  Y          L  L    P   GIA+G DR V
Sbjct: 489 RIYQRELQEKMFEALGFTNEVAEEQFGY---------LLEALTYGFPPHGGIALGLDRFV 539

Query: 331 MLVTGANNINEVIWTP 346
           ML+ G  NI EVI  P
Sbjct: 540 MLLAGEENIREVIAFP 555


>gi|315931838|gb|EFV10793.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 575

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 77/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 111 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 170

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 171 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 224

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++      ++   +   ++I + F+ +      E       +     
Sbjct: 225 QIDVEMSFCEQKDVINVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFNL 284

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 285 KFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 335



 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 428 EQNDDGSYSAMHHPFTMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 487

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 488 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 537

Query: 342 VIWTP 346
           VI  P
Sbjct: 538 VIAFP 542


>gi|288928261|ref|ZP_06422108.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331095|gb|EFC69679.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 586

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 73/221 (33%), Gaps = 9/221 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +     FIE+++  L   +P      R F     +    
Sbjct: 132 RRPNVRKNLELRHKMTILIRNFLDSKDFIEVETPILIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    ++ R   +         +          +     +   R+  ++     D     
Sbjct: 247 INLFEDMARHLFKELRGVELPAKLRQMPWHEAMKRYGSDKPDLRF-GMEFVELADVLKGT 305

Query: 193 DRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLG 231
               ++ +A+  G        D      + +      P +G
Sbjct: 306 GEFSVFNEAEYIGGICVPGCADYSRKQLNELTDFVKRPQVG 346



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 45/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           +L      + G+R         I    +     E    +            +  L + +P
Sbjct: 406 NLRLEMGDRLGLRDKDKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPEDVPLLDEHP 465

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLAC 312
              R  + ++     IE+      + D   Q   F            E         +  
Sbjct: 466 ERVR-AQAYDFVCNGIEVGGGSLRIHDGALQEKMFGIL-----GFTPERAMAQFGFLINA 519

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P  +G+A G DR V +  G N+I + I  P
Sbjct: 520 FKYGAPPHAGLAFGLDRFVSIFAGLNSIRDCIAFP 554


>gi|262394697|ref|YP_003286551.1| aspartyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338291|gb|ACY52086.1| aspartyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 592

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 72/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +   N++R            +Q +      +   +  +EA  R+   D     +  + 
Sbjct: 244 VREVTENMVRDM----------WQELLNVDLGQFPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 18/151 (11%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  +  W+ ++        E + G ++        P   +A           +  +
Sbjct: 415 KDLELTDESAWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT-E 315
           ++     E+      + +   Q   F+      +E Q K              L  L   
Sbjct: 475 DMVLNGYEVGGGSVRIHNADMQEAVFDILGITPEEQQLKFG----------FLLDALKFG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 525 TPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|320105587|ref|YP_004181177.1| aspartyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319924108|gb|ADV81183.1| aspartyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 604

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 66/192 (34%), Gaps = 19/192 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +   L R+ +  ++R       F+EI++  L   +P     ++            
Sbjct: 129 RRPEMQANFLMRHKVAQAIRGQLSSEGFLEIETPMLTRSTPEGARDYLVPSRVHPGTFYA 188

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 189 LPQ------SPQIFKQILMVGGFDRYFQIARCFRDEDLRADRQPEFTQIDLEISFPTQET 242

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +       +  A   AN  I +              +T  +A  +Y  ID          
Sbjct: 243 VFGVAERFLTAAFAAANVTIPT----------PFPRMTYDQAITKY-GIDKPDMRLPHMA 291

Query: 192 PDRHLLYLQAQQ 203
               +L  + ++
Sbjct: 292 ELTEVLTPELRE 303



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 54/177 (30%), Gaps = 15/177 (8%)

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIR----VAHDDTWSDIFSRILIEKIEPNLGINC 234
           N D              L    A +  +      A D  +  +    + E  E     + 
Sbjct: 402 NFDRQWIPKRIGALRIELAKKFADKHKLFDKTGTADDYRFLWVTDFPMYEFNEEKKTWDA 461

Query: 235 CTILDRYPAP--ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
                  P      + A            +++    +EL +    +     Q   F    
Sbjct: 462 AHHPFTSPHEDDIKSGALYNDKGSVRALAYDVVLNGLELGSGSIRIHRKDVQSEIF---- 517

Query: 293 QEKKKI--YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +       E       FL  L    P   GIA+G DR+VML+ GA+++ EVI  P
Sbjct: 518 --RSLGMTDEEARERFGFFLEALEYGTPPHGGIALGLDRIVMLLAGASSLREVIAFP 572


>gi|221632859|ref|YP_002522081.1| aspartyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221157011|gb|ACM06138.1| aspartyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 612

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 63/182 (34%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R +  LL R+ +   +R Y  E  F+EI++  L   +P      R +     I    
Sbjct: 146 RRARLQRNLLLRHQVVRFIRHYLEERDFVEIETPMLIKSTPEG---ARDYVVPSRI---F 199

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG ++ +  A   R+ +     QPEFT ++   +      
Sbjct: 200 PGHFYALPQSPQQLKQLLMVAGFDRYYQIARCMRDEDLRADRQPEFTQIDLEMSFVD--- 256

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                +  +    E    ++F               +T  EA  RY   D        + 
Sbjct: 257 -----VEDVLELIEGLYTEMFERFASKPLQAKPFPRLTYEEAMRRY-GSDKPDLRFGLEI 310

Query: 192 PD 193
            D
Sbjct: 311 DD 312



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 11/146 (7%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
             +  +    L E  E              P  E              K ++L A   EL
Sbjct: 441 HAFCWVIDPPLFEWNEEEQRWEAMHHPFTSPRDEDLPILDSDPSKVRAKAYDLVADGFEL 500

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFD 327
                 +        R E + +    +  +   I+  F   L       P   G+A G D
Sbjct: 501 GTGSIRIH-------RREVQNKIFSIMGYDDTEIERRFGHLLRAFEYGAPPHGGMAPGLD 553

Query: 328 RLVMLVTGANNINEVIWTPFSQSNQE 353
           R +M++ G +++ EVI  P +Q  Q+
Sbjct: 554 RTIMILAGESSLREVIAFPKNQRAQD 579


>gi|86149910|ref|ZP_01068139.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85839728|gb|EAQ56988.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 583

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 76/231 (32%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 179 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++       +   +   ++I + F+ +      E       +     
Sbjct: 233 QIDIEMSFCEQKDVINVAETFFKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDL 292

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 293 KFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 343



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EQNDDGSYSAMHHPFTMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 495

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGANNI E
Sbjct: 496 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANNIRE 545

Query: 342 VIWTP 346
           VI  P
Sbjct: 546 VIAFP 550


>gi|315645806|ref|ZP_07898927.1| aspartyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315278567|gb|EFU41881.1| aspartyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 591

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 70/230 (30%), Gaps = 17/230 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+      R++     F+++++  L   +P     ++            
Sbjct: 134 RRPEMQKTLMLRSKASKIFRDFLDGEGFVDVETPILTKSTPEGARDYLVPSRVHPGEFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 194 LPQ------SPQIYKQLLMVSGIERYYQIARCFRDEDLRADRQPEFTQVDIETSFLERDD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L+     ++    +                 +  + I+ AEA ++Y +            
Sbjct: 248 LLTMMEQLMVKLFKETAGVEL---------ATPFQRISHAEAMSKYGSDKPDLRFGLELI 298

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               ++     +    V          +             +      RY
Sbjct: 299 EMNDIVTSSGVKVFSSVIEKGGEVKCLNAKGCGTWTRKEIDDLGPYAARY 348



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 50/163 (30%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +Q G+   ++  ++ +    L+   E              P  E         
Sbjct: 407 ALRLKIGRQLGLIDDNEYKFAWVLDFPLLSYDEDAKRYVAEHHPFTRPKHEDLELLDTDP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY---NETYPIDEDFLA 311
                + +++     E+      +     Q   F         +     E +      L 
Sbjct: 467 LAVRAEAYDIVLNGYEVGGGSMRIYQREVQEKMF-------AALGLSPEEAHEKFGFLLD 519

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA GFDRLVML+ G  N+ E I  P + S  +
Sbjct: 520 AFEYGTPPHGGIAFGFDRLVMLLAGRTNLRETIAFPKTASATD 562


>gi|261418412|ref|YP_003252094.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767629|ref|YP_004133130.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374869|gb|ACX77612.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112495|gb|ADU94987.1| aspartyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 590

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 27/201 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R            L  R+ I  ++R++    +F+EI++  L   +P     ++ 
Sbjct: 123 DVRLKYRYLDLRRPVMFQTLALRHKITKTVRDFLDSERFLEIETPMLTKSTPEGARDYLV 182

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 183 PSRVHPGEFYALPQ------SPQIFKQLLMVGGVERYYQIARCFRDEDLRADRQPEFTQI 236

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    E ++     ++    + A                    IT  EA + Y + 
Sbjct: 237 DIEMSFIEQEDIIDLTERMMAAVVKAAKGIDIP---------RPFPRITYDEAMSCYGSD 287

Query: 181 DLGTTLDNPDQPDRHLLYLQA 201
                          ++   A
Sbjct: 288 KPDIRFGLELVDVSEIVRDSA 308



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 51/175 (29%), Gaps = 17/175 (9%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           DL   + +        L     + G  +   D     F  +    +              
Sbjct: 390 DLLLFVADEKAIVAAALGALRLKLGKELGLIDEAKLAFLWVTDWPLLEYDEEEGRYYAAH 449

Query: 241 YPAPESALANI----YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EM 292
           +P       +I            + ++L     EL      + +   Q   F      E 
Sbjct: 450 HPFTMPVRDDIPLLETNPSAVRAQAYDLVLNGYELGGGSLRIFERDVQEKMFRALGFSEE 509

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + +++            L       P   GIA+G DRLVML+ G  N+ + I  P
Sbjct: 510 EARRQFG--------FLLEAFEYGTPPHGGIALGLDRLVMLLAGRTNLRDTIAFP 556


>gi|219681679|ref|YP_002468065.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682234|ref|YP_002468618.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471370|ref|ZP_05635369.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254781721|sp|B8D9A6|SYD_BUCA5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781722|sp|B8D7K8|SYD_BUCAT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219621967|gb|ACL30123.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624522|gb|ACL30677.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086054|gb|ADP66136.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086627|gb|ADP66708.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087731|gb|ADP67810.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 586

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 71/202 (35%), Gaps = 29/202 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R            L  RN I   +R +  +  F++I++  L   +P     ++ 
Sbjct: 119 DSRLKYRYLDLRSFDILENLKIRNKITYLIRNFMTKKNFLDIETPILTKSTPEGARDYLV 178

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ +G ++ +     +R+ +     QPEFT +
Sbjct: 179 PSRNHYGKFYALPQ------SPQLFKQILMISGIDRYYQIVKCFRDEDLRSDRQPEFTQI 232

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++     N+I+            +  +      +   I+  EA  +Y   
Sbjct: 233 DIEVSFMSAKKIRNLVENLIK----------KLWLEIRNINLKKFPQISFHEAMKKY-GS 281

Query: 181 DLGTTLDNPDQPDRHLLYLQAQ 202
           D     +  +  D   ++   +
Sbjct: 282 DKPDLRNPIEIIDVSNIFKDKK 303



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 9/112 (8%)

Query: 240 RYP----APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            +P                D   +  ++L     E+      + D   Q+  F+  +  K
Sbjct: 448 HHPFTAVKNMDREILKNSPDLAISDSYDLIINGYEIGGGSVRIHDVNMQKQVFDI-IGIK 506

Query: 296 KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           K + NE +      +  L    P  +GIA+G DR+VML+T + NI +VI  P
Sbjct: 507 KSMQNEKFG---FLIEALKYGAPPHAGIALGLDRIVMLLTNSKNIRDVIAFP 555


>gi|15616925|ref|NP_240138.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134956|sp|P57401|SYD_BUCAI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|25293054|pir||H84966 aspartate-tRNA ligase (EC 6.1.1.12) [imported] - Buchnera sp.
           (strain APS)
 gi|10038990|dbj|BAB13024.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 586

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 71/202 (35%), Gaps = 29/202 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R            L  RN I   +R +  +  F++I++  L   +P     ++ 
Sbjct: 119 DSRLKYRYLDLRSFDILENLKIRNKITYLIRNFMTKKNFLDIETPILTKSTPEGARDYLV 178

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ +G ++ +     +R+ +     QPEFT +
Sbjct: 179 PSRNHYGKFYALPQ------SPQLFKQILMISGIDRYYQIVKCFRDEDLRSDRQPEFTQI 232

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++     N+I+            +  +      +   I+  EA  +Y   
Sbjct: 233 DIEVSFMSAKKIRNLVENLIK----------KLWLEIRNINLKKFPQISFHEAMKKY-GS 281

Query: 181 DLGTTLDNPDQPDRHLLYLQAQ 202
           D     +  +  D   ++   +
Sbjct: 282 DKPDLRNPIEIIDVSNIFKDKK 303



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 9/112 (8%)

Query: 240 RYP----APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            +P                D   +  ++L     E+      + D   Q+  F+  +  K
Sbjct: 448 HHPFTAVKNMDREILKNSPDLAISDSYDLIINGYEIGGGSVRIHDVNMQKQVFDI-IGIK 506

Query: 296 KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           K + NE +      +  L    P  +GIA+G DR+VML+T + NI +VI  P
Sbjct: 507 KSMQNEKFG---FLIEALKYGAPPHAGIALGLDRIVMLLTNSKNIRDVIAFP 555


>gi|187932291|ref|YP_001892276.1| aspartyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187713200|gb|ACD31497.1| aspartyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 592

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 133 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 189 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  + +T A+A  +Y +      +     
Sbjct: 247 IMSTMERMIAGLFKETIG---------VEFATPFQVMTFADAIDKYGSDKPDLRIPLEFV 297

Query: 192 PDRHLLYLQAQQ 203
             +  +  +  +
Sbjct: 298 NIKEDMQNEEFK 309



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 10/141 (7%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRF--TKRFELYACNIE 270
             ++ + +         +       +P      S++ ++   +P    ++ +++     E
Sbjct: 427 KDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRAYDMVINGYE 486

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F           +E        L  L    P   GIA G DRL
Sbjct: 487 VGGGSIRIHKQDIQAKVF----NLLGISDDEAREKFGFMLDALSYGTPIHGGIAFGVDRL 542

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TG  NI +VI  P +Q+
Sbjct: 543 IMLLTGTTNIRDVIAFPKTQT 563


>gi|157414919|ref|YP_001482175.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047092|sp|A8FL61|SYD_CAMJ8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157385883|gb|ABV52198.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747557|gb|ADN90827.1| Aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 583

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 77/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 179 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++      ++   +   ++I + F+ +      E       +     
Sbjct: 233 QIDVEMSFCEQKDVINVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDL 292

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 293 KFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 343



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EQNDDGSYSAMHHPFTMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 495

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 496 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 545

Query: 342 VIWTP 346
           VI  P
Sbjct: 546 VIAFP 550


>gi|121612173|ref|YP_001000341.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005286|ref|ZP_02271044.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|166225336|sp|A1VZ00|SYD_CAMJJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|87250283|gb|EAQ73241.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 583

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 77/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 179 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++      ++   +   ++I + F+ +      E       +     
Sbjct: 233 QIDVEMSFCEQKDVINVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDL 292

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 293 KFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 343



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EQNDDGSYSAMHHPFTMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 495

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 496 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 545

Query: 342 VIWTP 346
           VI  P
Sbjct: 546 VIAFP 550


>gi|328952295|ref|YP_004369629.1| aspartyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328452619|gb|AEB08448.1| aspartyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 593

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 26/189 (13%)

Query: 15  HYR----RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
            YR    RRP     L  R+     +R Y  +  FIE+++  L   +P     ++    T
Sbjct: 135 RYRYLDLRRPGLMRNLRLRHRAAQVVRNYLNQQGFIEVETPVLTRSTPEGARDYLVPSRT 194

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+ AG E+ +     +R+ +     QPEFT ++   
Sbjct: 195 NPGRFFALPQ------SPQLFKQLLMMAGLERYYQLCRCFRDEDLRADRQPEFTQIDMEM 248

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +  S E +      ++    +    +  +              +T AE  +R+  +D   
Sbjct: 249 SFISEEDIYDVVEGMMAILFKEILGREVT---------LPFPRLTYAECISRF-GVDRPD 298

Query: 185 TLDNPDQPD 193
                +  +
Sbjct: 299 RRFGLELVE 307



 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 48/151 (31%), Gaps = 6/151 (3%)

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
           L+L  ++  I     D        +L    E    +         P  +           
Sbjct: 418 LHLGKKEHLILPETYDFCWVTHFPLLEYDAEEKRYVAMHHPFTS-PLEQDLPLLQTDPGA 476

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-E 315
              + ++L     E+      +     Q   F+      K    E        L  L   
Sbjct: 477 VRARAYDLVLNGNEVGGGSIRIHQRQVQEKVFDTL----KISPEEAQQKFGFLLEALEYG 532

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   G+A GFDRLVM++ GA +I EVI  P
Sbjct: 533 APPHGGVAFGFDRLVMILAGAKSIREVIAFP 563


>gi|320102960|ref|YP_004178551.1| aspartyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319750242|gb|ADV62002.1| aspartyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 589

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 18/201 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
               ++  L+ R+ +  +LR    ++ F+EI++  L   +P      +            
Sbjct: 135 RRPEQQKVLILRHRLNQTLRRVMSQHGFLEIETPILGRSTPEGARDFLVPSRIHPGAFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A  +R+ +     QPEFT L+   +   +E 
Sbjct: 195 LPQ------SPQLYKQLLMVAGYDRYFQIARCFRDEDLRANRQPEFTQLDVEMSFVEFED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I   A        S              +   +A  RY  +D        + 
Sbjct: 249 VLDTIELLIVELAREFAGMDLS---------RPLPRLDYRDAMERY-GVDRPDLRFGMEL 298

Query: 192 PDRHLLYLQAQQAGIRVAHDD 212
            D   L    +    + A D 
Sbjct: 299 HDLADLAAHTEFQVFKQALDY 319



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 38/126 (30%), Gaps = 17/126 (13%)

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                         P PE              + ++L     E         DP  Q   
Sbjct: 441 EEGRFVAEHHPFTMPLPEDLPLLQTDPAKVRAQAYDLVINGEEAGGGTIRCHDPAIQARI 500

Query: 288 FE------KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           FE       + +EK              L+ L    P   GIA+G DRLVML  G  +I 
Sbjct: 501 FELLGLTPDQAEEKFG----------FLLSALRLGAPPHGGIALGLDRLVMLFAGLTSIR 550

Query: 341 EVIWTP 346
           + I  P
Sbjct: 551 DCIAFP 556


>gi|153828676|ref|ZP_01981343.1| aspartyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229529746|ref|ZP_04419136.1| aspartyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|148875829|gb|EDL73964.1| aspartyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229333520|gb|EEN99006.1| aspartyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|327483869|gb|AEA78276.1| Aspartyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 591

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   S        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFESDDEGNVAAMHHPFTS-PLNLSPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|86151553|ref|ZP_01069767.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|86153398|ref|ZP_01071602.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85841182|gb|EAQ58430.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85843124|gb|EAQ60335.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 583

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 77/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 179 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++      ++   +   ++I + F+ +      E       +     
Sbjct: 233 QIDVEMSFCEQKDVINVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDL 292

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 293 KFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 343



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EQNDDGSYSAMHHPFTMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 495

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 496 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 545

Query: 342 VIWTP 346
           VI  P
Sbjct: 546 VIAFP 550


>gi|261855094|ref|YP_003262377.1| aspartyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261835563|gb|ACX95330.1| aspartyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 596

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 79/240 (32%), Gaps = 23/240 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ +  +LRE+     F+++++  L   +P     ++    T       
Sbjct: 133 RRPEMLARLKLRHQVTRALREHLDNAGFMDVETPVLTRATPEGARDYLVPSRTHPGEFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ +     +R+ +     QPEFT L+   +    E+
Sbjct: 193 LPQ------SPQIFKQLLMVAGIERYYQIVKCFRDEDLRADRQPEFTQLDIETSFLDEEE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    +++R             Q +     +    +T AEA  R+   D        + 
Sbjct: 247 VMALIEDMMRHLF---------AQTIELALPNPLPRLTWAEAMRRF-GSDKPDLRIPLEL 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
            D   L +           +D    I          PN      + +D Y    S     
Sbjct: 297 VDVGDLLVAVDFKVFSGPANDPRGRI-----AALRVPNGNSLPRSAIDDYTKFVSIYGAK 351



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIY----PADPRFTKRFELYACNIELCNAC 275
            +    +              +P     L +++      +   ++ ++      EL    
Sbjct: 432 WVTEFPMFEYDEKEGRYYALHHPFTAPNLDDLHLLETDPEAVRSRAYDFVLNGFELGGGS 491

Query: 276 DELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDR 328
             + D   Q+  FE      ++  EK              L  L    P  +G+A G DR
Sbjct: 492 VRIHDQTMQKRVFELLGISAEQASEKFG----------FLLDALKFGAPPMAGLAFGVDR 541

Query: 329 LVMLVTGANNINEVIWTPFSQS 350
           +VML++GA +I EVI  P +QS
Sbjct: 542 IVMLMSGATSIREVIAFPKTQS 563


>gi|121730021|ref|ZP_01682434.1| aspartyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121628240|gb|EAX60758.1| aspartyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 575

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   S        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFESDDEGNVAAMHHPFTS-PLNLSPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|320334429|ref|YP_004171140.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755718|gb|ADV67475.1| aspartyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 584

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 64/173 (36%), Gaps = 20/173 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RRR     L  R+ +Q+ +  +     F+ +++  L   +P      R F     +   
Sbjct: 132 LRRREMQDVLRLRSRVQAEVTRFLDSEGFVNVETPMLTRSTPEGA---RDFLVPSRLN-- 186

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ AG ++ + FA  +R+ +     QP+FT L+   +    +
Sbjct: 187 -PGEFYALPQSPQLFKQLLMIAGLDRYYQFARCFRDEDLRADRQPDFTQLDMEMSFVEQD 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            ++     ++R        +            +    I+  EA  RY +    
Sbjct: 246 DVLDLNERLLRHVFREVLGEDLP---------NPFPRISYFEAMDRYGSDKPD 289



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 52/138 (37%), Gaps = 14/138 (10%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           W   F ++  +                +P   +             + ++L     E+  
Sbjct: 420 WVTDFPQLDQDPETGEWTYMHHPFTAPHPDDVALFGTP-RQGEIRAQAYDLVLNGFEVGG 478

Query: 274 ACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDR 328
               + DP  Q   F      E+Q ++K           F+  L +  P   GIA GFDR
Sbjct: 479 GSVRIHDPAVQTQMFGAIGFTEVQAREKFG--------FFMDALASGTPPHGGIAWGFDR 530

Query: 329 LVMLVTGANNINEVIWTP 346
           L+ML++GA+NI EVI  P
Sbjct: 531 LIMLMSGASNIREVIAFP 548


>gi|157151355|ref|YP_001449750.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076149|gb|ABV10832.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 578

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 57/180 (31%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            E   R+   D    L    +  R    L   +  +  A D     +   +      +  
Sbjct: 374 QELLTRFEAKDGDLILLVMAKKHRAQEALGHLRLEVAKALDLIDPSLLHFLWVVDWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +             +  +++     E+      + D   Q   F
Sbjct: 434 WNEDQNRYQAMHHPFTQGIFEEGQEPGQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEAMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        +  E Y  D   FL  L    P   G+A+G DRLVM++TG  NI +VI  P
Sbjct: 494 E-----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILTGEQNIRQVIAFP 548



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 89/278 (32%), Gaps = 27/278 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +  + 
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRV--YK 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKAVVKTTHGLELT---------EAFPTISYEEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
               L    +   I+ A D+        ++   +           L  Y           
Sbjct: 296 SLTDLCQSNESLLIKKALDN-----QEEVMGICVPDAASAFSKKQLSHYYQEMKEFGC-S 349

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +  +L            E     E   RFE 
Sbjct: 350 RFASLKVENGQLV--GDLASTFEAE---SQELLTRFEA 382


>gi|160933302|ref|ZP_02080690.1| hypothetical protein CLOLEP_02147 [Clostridium leptum DSM 753]
 gi|156867179|gb|EDO60551.1| hypothetical protein CLOLEP_02147 [Clostridium leptum DSM 753]
          Length = 693

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 60/172 (34%), Gaps = 17/172 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +   + +Y     F+++++  L   +P     ++        +   
Sbjct: 135 RRPKLLNNLKFRHRLTKLIHDYLDGQGFLQVETPMLTKSTPEGARDYLVPSRVHQGMFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G +K +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 195 LPQ------SPQIFKQLLMVGGVDKYYQIARCFRDEDLRADRQPEFTQVDMELSFVDQED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +++    + +     A    F               +T  +A  RY +    
Sbjct: 249 ILEHLEKMFKHLFREALGVEFQ---------EPFPRLTWQQAMDRYGSDKPD 291



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 50/158 (31%), Gaps = 11/158 (6%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A   G+R   D  +  +      E  +              P PE     I    
Sbjct: 410 LRLELADMLGLRKPGDYRFLIVTDFPEFEYSQEEGRYLATHHPFTMPYPEDIPYLISDPA 469

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LAC 312
               + +++    +EL +    +     QR  FE        +      I E F   +  
Sbjct: 470 RVRAQAYDVVLNGVELGSGSMRIHQKDVQRKMFE-------ALGFSEEQIQERFGFMVNA 522

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                P   G A G DRL M +  A ++ +VI  P ++
Sbjct: 523 FQYGTPPHGGFAFGLDRLAMQMLEAESLRDVIAFPKNK 560


>gi|57242599|ref|ZP_00370536.1| aspartyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016528|gb|EAL53312.1| aspartyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 583

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 18/206 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            + R       R+    + R       F+E+++  L   +P     ++            
Sbjct: 132 RNPRLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLVPSRVHQGEFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ A  ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 192 LPQ------SPQLFKQLLMCANFDRYFQIAKCFRDEDLRADRQPEFTQIDVEMSFCEQKD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M      ++       ++I +              ++  EA   Y +       D    
Sbjct: 246 VMAVAETFLKDIFAACGKQIRT----------PFRQMSYKEAMENYGSDKPDLRFDLKLI 295

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
               +      +    +A D   + I
Sbjct: 296 DVIDIFAKSNNEIFTNIAKDPYKNRI 321



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EKNDDGSYSAMHHPFTMPKNIDEENLEEISSIAYDVVLNGVELGGGSIRIHKNEIQQKVF 495

Query: 289 E----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           +     E ++++K            L  L+   P   GIA+G DRL+MLV+ A++I EVI
Sbjct: 496 KLLNINEEEQREKFG--------FLLDALSFGAPPHGGIAIGLDRLIMLVSKASSIREVI 547

Query: 344 WTP 346
             P
Sbjct: 548 AFP 550


>gi|118496744|ref|YP_897794.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|118422650|gb|ABK89040.1| aspartyl-tRNA synthetase [Francisella novicida U112]
          Length = 592

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 133 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 189 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  + +T A+A  +Y +      +     
Sbjct: 247 IMSTMERMIAGLFKETIG---------VEFATPFQVMTFADAIDKYGSDKPDLRIPLEFV 297

Query: 192 PDRHLLYLQAQQ 203
             +  +  +  +
Sbjct: 298 NIKEDMQNEEFK 309



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 50/141 (35%), Gaps = 10/141 (7%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRF--TKRFELYACNIE 270
             ++ + +         +       +P      S++ ++   +P    ++ +++     E
Sbjct: 427 KDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRAYDMVINGYE 486

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F            E        L  L    P   GIA G DRL
Sbjct: 487 VGGGSIRIHKQDIQAKVF----NLLGISDEEAREKFGFMLDALSYGTPIHGGIAFGVDRL 542

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TG  NI +VI  P +Q+
Sbjct: 543 IMLLTGTTNIRDVIAFPKTQT 563


>gi|56707192|ref|YP_169088.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669662|ref|YP_666219.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254371406|ref|ZP_04987407.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875668|ref|ZP_05248378.1| aspS, aspartyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56603684|emb|CAG44640.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110319995|emb|CAL08023.1| Aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569645|gb|EDN35299.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254841667|gb|EET20103.1| aspS, aspartyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 592

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 133 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 189 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  + +T A+A  +Y +      +     
Sbjct: 247 IMSTMERMIAGLFKETIG---------VEFATPFQVMTFADAIDKYGSDKPDLRIPLEFV 297

Query: 192 PDRHLLYLQAQQ 203
             +  +  +  +
Sbjct: 298 NIKEDMQNEEFK 309



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 10/141 (7%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRF--TKRFELYACNIE 270
             ++ + +         +       +P      S++ ++   +P    ++ +++     E
Sbjct: 427 KDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRAYDMVINGYE 486

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F           +E        L  L    P   GIA G DRL
Sbjct: 487 VGGGSIRIHKQDIQAKVF----NLLGISDDEAREKFGFMLDALSYGTPIHGGIAFGIDRL 542

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TG  NI +VI  P +Q+
Sbjct: 543 IMLLTGTTNIRDVIAFPKTQT 563


>gi|332827897|gb|EGK00619.1| aspartyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 584

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 22/187 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ I    R +  E QFIE+++  L   +P      R F     +   
Sbjct: 132 LRRTPVRKNLELRHKIAFETRRFLDERQFIEVETPVLIGSTPEG---ARDFVVPSRMN-- 186

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   ++ S E
Sbjct: 187 -PGEFYALPQSPQLFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSYVSQE 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     + +   +                  +   +T A    +Y   D   T    +
Sbjct: 246 DVLNMFEGLTKHLFKKVKGIDIP----------DFPRMTYA-HAMKYYGSDKPDTRFGME 294

Query: 191 QPDRHLL 197
             +   L
Sbjct: 295 FVEIKDL 301



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    L+EK E              P  E         
Sbjct: 404 ELRLEVGDQLGLRDKNKFNCLWVIDFPLLEKDEELGRFFAKHHPFTSPKEEDIPMLESDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + +   Q   F            E       FL    
Sbjct: 464 GAVRANAYDMVINGVEVGGGSVRIHNSQLQNKMFHVL-----GFTEEKAQAQFGFLMNAF 518

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P  +G+A G DRLV L  G ++I + I  P
Sbjct: 519 KYGAPPHAGLAFGLDRLVSLFAGLDSIRDCIAFP 552


>gi|258626387|ref|ZP_05721234.1| aspartyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258581439|gb|EEW06341.1| aspartyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 591

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   +        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFEGDDEGNVAAMHHPFTS-PLNLTPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|320530173|ref|ZP_08031243.1| aspartyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137606|gb|EFW29518.1| aspartyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 602

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 70/194 (36%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                +  ++ R+ +   +R++F  N F+EI++  L + +P      R F     +    
Sbjct: 141 RRPEMQANIMLRHRVAKIMRDFFDRNGFLEIETPMLCKSTPEG---ARDFLVPSRLNAG- 196

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G EK F     +R+ +     QPEFT L+   +    E 
Sbjct: 197 --EFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQPEFTQLDIEMSFMDQES 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++   E              +     E     +   R+  ++L    D    
Sbjct: 255 ILSLMEELVKEVFEKTLGAHIETPLPRMSWDEAMERFGSDKPDLRF-GMELQDITDYVGG 313

Query: 192 PDRHLLYLQAQQAG 205
            +  +     +  G
Sbjct: 314 SEFKVFNAVMEAGG 327



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 50/165 (30%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+      ++  +    + E                 P  E         
Sbjct: 414 ELRLEMGRRRGLIDPDALSFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDIPMLATDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                  +++    +E+      +     Q   FE      +E +EK       +     
Sbjct: 474 GKVKANAYDMVLNGVEIGGGSLRIYRSDLQEQVFETLGLSPEEAREKFGFMMNAFE---- 529

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                   P   G+A G DRLVML+    +I +VI  P +QS  +
Sbjct: 530 -----YGTPPHGGLAFGLDRLVMLMAKRRSIRDVIPFPKTQSASD 569


>gi|208779985|ref|ZP_03247328.1| aspartyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743989|gb|EDZ90290.1| aspartyl-tRNA synthetase [Francisella novicida FTG]
          Length = 590

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 65/189 (34%), Gaps = 17/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 131 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 187 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  + +T A+A  +Y +      +     
Sbjct: 245 IMSTMERMIAGLFKETIG---------VEFATPFQVMTFADAIDKYGSDKPDLRIPLEFV 295

Query: 192 PDRHLLYLQ 200
             +  +  +
Sbjct: 296 NIKEDMQNE 304



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 50/141 (35%), Gaps = 10/141 (7%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRF--TKRFELYACNIE 270
             ++ + +         +       +P      S++ ++   +P    ++ +++     E
Sbjct: 425 KDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRAYDMVINGYE 484

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F            E        L  L    P   GIA G DRL
Sbjct: 485 VGGGSIRIHKQDIQAKVF----NLLGISDEEAREKFGFMLDALSYGTPIHGGIAFGVDRL 540

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TG  NI +VI  P +Q+
Sbjct: 541 IMLLTGTTNIRDVIAFPKTQT 561


>gi|262171801|ref|ZP_06039479.1| aspartyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261892877|gb|EEY38863.1| aspartyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 590

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ GI          +    + E  +              P   +        
Sbjct: 408 ALRLKAGKELGITNESAWAPLWVVDFPMFEGDDEGNVAAMHHPFTS-PLNLTPEQLKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +   +  +++     E+      + +   Q   F+      +E + K             
Sbjct: 467 EEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVFDILGITPEEQRIKFG----------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 517 LLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|319937182|ref|ZP_08011589.1| aspartyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807548|gb|EFW04141.1| aspartyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 588

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 69/194 (35%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+ I  S+REY     FI+I++  L   +P      R F     +    
Sbjct: 128 RRPMMQENLMTRHKITRSIREYLDNLDFIDIETPYLNRSTPEG---ARDFLVPSRVH--- 181

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ +G EK +  A  +R+ +     Q EFT ++   +  S ++
Sbjct: 182 KGEFYALPQSPQLFKQLLMVSGFEKYYQIARCFRDEDLRADRQIEFTQVDVEMSFLSTDR 241

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +I                         E   + +   R+  ++L         
Sbjct: 242 ILEIGEGMIAKVMHDVKGIDIELPLRRLTWHEAMEKYGIDKPDTRF-GLELVNLNHIVAD 300

Query: 192 PDRHLLYLQAQQAG 205
            D  +     +  G
Sbjct: 301 VDFAVFKNALEAHG 314



 Score = 88.9 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 46/149 (30%), Gaps = 11/149 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +       +  +    + E  +              P  E         +      
Sbjct: 410 KELKLYDPSTFDFLWVVDFPMFEYDDETQRYYAKHHPFTRPKDEDIDKLETDPENCLADA 469

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE---DFLACL-TEMP 317
           +++     EL      + +   Q   F       K +      ID     F+  L    P
Sbjct: 470 YDIVLNGFELGGGSQRIYEQNLQERAF-------KALGFTQEQIDSQFGWFVEGLQYGTP 522

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              G A+G DR+ ML+ G +++ +VI  P
Sbjct: 523 PHGGFALGLDRVAMLLCGCDSLRDVIAFP 551


>gi|328676200|gb|AEB27070.1| Aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase
           [Francisella cf. novicida Fx1]
          Length = 590

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 65/189 (34%), Gaps = 17/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 131 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 187 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  + +T A+A  +Y +      +     
Sbjct: 245 IMSTMERMIAGLFKETIG---------VEFATPFQVMTFADAIDKYGSDKPDLRIPLEFV 295

Query: 192 PDRHLLYLQ 200
             +  +  +
Sbjct: 296 NIKEDMQNE 304



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 50/141 (35%), Gaps = 10/141 (7%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRF--TKRFELYACNIE 270
             ++ + +         +       +P      S++ ++   +P    ++ +++     E
Sbjct: 425 KDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRAYDMVINGYE 484

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F            E        L  L    P   GIA G DRL
Sbjct: 485 VGGGSIRIHKQDIQAKVF----NLLGISDEEAREKFGFMLDALSYGTPIHGGIAFGVDRL 540

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TG  NI +VI  P +Q+
Sbjct: 541 IMLLTGTTNIRDVIAFPKTQT 561


>gi|70999878|ref|XP_754656.1| asparaginyl-tRNA synthetase Slm5 [Aspergillus fumigatus Af293]
 gi|66852293|gb|EAL92618.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus fumigatus
           Af293]
 gi|159127670|gb|EDP52785.1| asparaginyl-tRNA synthetase Slm5, putative [Aspergillus fumigatus
           A1163]
          Length = 572

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 57/396 (14%), Positives = 103/396 (26%), Gaps = 65/396 (16%)

Query: 15  HYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS---PGNETHIR-AF 62
           H R R          R+     L   F +     ++++    +  S      ET      
Sbjct: 172 HLRLRTPFNSVLSRFRSECLYQLGNVFRDAPNGGYVQVQPPLITSSDCEGAGETFTVLPR 231

Query: 63  ST----ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEF 117
            T    +       R P YL  S +   +   AA    ++  +  +R  +     H  EF
Sbjct: 232 ETIMDPKSEGNHFFRAPKYLTVSSQLHLEAY-AAELGNVWAISPTFRAEKSDTPRHLSEF 290

Query: 118 TMLEWYRAHESYEQLMKDCMNII------RCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            MLE           + D +  +      R       Q+I + +    +   +     V 
Sbjct: 291 YMLEAEMNFMDDLDSLTDAVEYVVRDLTRRLYQSPVGQEILTAKRSGESGQDDAGNGAVP 350

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG-IRVAHDDTWSDIFSRILIEKIEPNL 230
               R+ ++  G             L   A   G +   +  TW++       + I   +
Sbjct: 351 NLRQRWVDLMEGPRWRRITYTQAMELLEAAVARGEVSFEYAPTWTEGLQLEHEKYIVDVI 410

Query: 231 GINCCTILDRYPAPESALAN-IYPADPRFTKR-----------FELYACNIELCNACDEL 278
                  +  YP              P   +              L     E+       
Sbjct: 411 NGGQPVFVTDYPKAIKPFYMAPSHVAPGKEEDIRAPGETVACFDLLLPEVSEVAGGSLRE 470

Query: 279 LDPIEQRHRFEKEMQEKKKIYNET--------------------YPIDEDF-----LACL 313
                           K+++Y                        P  ED       A L
Sbjct: 471 HRLPNIIQNMRDHGLIKQRLYPAAGAGETPTTQTAPEQPLYPHLQPY-EDLGHLQWYADL 529

Query: 314 T--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                    G  +GFDR +  + G +++ +V+  P 
Sbjct: 530 RRWGSAPHGGFGLGFDRFLSYLAGVSSVRDVVAFPR 565


>gi|313202118|ref|YP_004040776.1| aspartyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312441434|gb|ADQ85540.1| aspartyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 586

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 76/196 (38%), Gaps = 19/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R  +  +LR++   N FIE+++  L   +P     ++            
Sbjct: 123 RRPAMQKNMMLRYRVAKTLRDHLDSNGFIEVETPMLTRSTPEGARDYLVPSRVHH----- 177

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E+
Sbjct: 178 -GQFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQPEFTQVDIETSFLGEEE 236

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M    ++IR   +            + +  ++   +  +EA  +Y +   D+  TL+  
Sbjct: 237 IMNIVEDMIRKMFKSV---------QDIDLPAQFPRMPFSEAMNKYGSDKPDMRVTLEIT 287

Query: 190 DQPDRHLLYLQAQQAG 205
           +  D          AG
Sbjct: 288 ELTDIMKDVDFKVFAG 303



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 43/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G           +    + E  E              P            
Sbjct: 403 ALRTKVGHEKGHVDGRAWAPLWVVDFPMFEHDEEADRWVALHHPFTSPKDGHEDLLTTNP 462

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               +K +++     E+      +     Q   F+     K+    E        L  L 
Sbjct: 463 GAALSKAYDMVLNGWEVGGGSVRIHKQEVQSKVFDALKISKE----EAQEKFGFLLDALQ 518

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DRLV L+ GA +I +VI  P
Sbjct: 519 YGAPPHGGLAFGLDRLVTLMAGAESIRDVIAFP 551


>gi|88597107|ref|ZP_01100343.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88190796|gb|EAQ94769.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
          Length = 583

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 78/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 179 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++K     ++   +   ++I + F+ +      E       +     
Sbjct: 233 QIDVEMSFCEQKDVIKVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDL 292

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 293 KFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 343



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EQNDDGSYSAMHHPFTMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 495

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 496 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 545

Query: 342 VIWTP 346
           VI  P
Sbjct: 546 VIAFP 550


>gi|116750723|ref|YP_847410.1| aspartyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116699787|gb|ABK18975.1| aspartyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 613

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R    LL R+      REYF    F+E+++  L   +P     ++            
Sbjct: 158 RRPRMFHNLLLRHRAVQLTREYFNGAGFLEVETPVLTKSTPEGARDYLVPSRVNPGKFYA 217

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ +     +R+ +     QPEFT L+   +  + E 
Sbjct: 218 LPQ------SPQLFKQILMVAGFERYYQIVKCFRDEDLRADRQPEFTQLDLEMSFVNEEH 271

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +   + IR   +                      ++ AEA   Y   D   T      
Sbjct: 272 IYELIESWIRLLMKELLG---------VEMAPPFPRMSYAEAMRLY-GTDRPDTRFGLLL 321

Query: 192 PD 193
            D
Sbjct: 322 TD 323



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 43/130 (33%), Gaps = 6/130 (4%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              +L    E              P  E         +   ++ ++L    IE+      
Sbjct: 455 HFPLLEWDAEEKRYTAVHHPFTS-PIEEDVPLLREHPEQVRSRAYDLVLNGIEIGGGSIR 513

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGA 336
           +     Q   F      ++    E        L  L    P   GIA G DRLVML++G+
Sbjct: 514 IHRQELQELVFGALGIGRE----EAAEKFGFLLEALQYGAPPHGGIAFGVDRLVMLLSGS 569

Query: 337 NNINEVIWTP 346
            +I +VI  P
Sbjct: 570 TSIRDVIAFP 579


>gi|229826227|ref|ZP_04452296.1| hypothetical protein GCWU000182_01599 [Abiotrophia defectiva ATCC
           49176]
 gi|229789097|gb|EEP25211.1| hypothetical protein GCWU000182_01599 [Abiotrophia defectiva ATCC
           49176]
          Length = 596

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+       +  I    L+   E              P  E         
Sbjct: 415 ALRLDIGEELGLIDKSKFNFLWIVEFPLLGWNEDENRFQAEHHPFTAPMEEDWENADKDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     EL      +     Q   FE     K+    E +      L    
Sbjct: 475 GSIRAKAYDIVLNGYELGGGSVRIYQNDVQEKMFELLGFTKE----EAHSKFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DR VML+ GA NI EVI  P ++
Sbjct: 531 YGVPPHAGLAYGVDRFVMLLAGAENIREVIAFPKNK 566



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 63/190 (33%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ ++ +   +R++  +  F+E+++  +   +P     ++            
Sbjct: 140 RRPDMQEKLMLKSKVLRLMRDFMADEGFVEVETPIMCNSTPEGARDYLVPSRVNQGCFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT  +   +    + 
Sbjct: 200 LPQ------SPQVLKQLLMLSGFDRYFQIARCFRDEDLRADRQPEFTQADMELSFVDVDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +I+   +                      +   +A   Y   D   T      
Sbjct: 254 VLEVNERLIKHIMKETKGIDIE---------LPLPRMRWQDAMNDY-GSDKPDTRFEMKL 303

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 304 VDVSEVVKGC 313


>gi|311087210|gb|ADP67290.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 586

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 71/202 (35%), Gaps = 29/202 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R            L  RN I   +R +  +  F++I++  L   +P     ++ 
Sbjct: 119 DSRLKYRYLDLRSFDILENLKIRNKITYLIRNFMTKKNFLDIETPILTKSTPEGARDYLV 178

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ +G ++ +     +R+ +     QPEFT +
Sbjct: 179 PSRNHYGKFYALPQ------SPQLFKQILMISGIDRYYQIVKCFRDEDLRSDRQPEFTQI 232

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++     N+I+            +  +      +   I+  EA  +Y   
Sbjct: 233 DIEVSFMSAKKIRNLVENLIK----------KLWLEIRNITLKKFPQISFHEAMKKY-GS 281

Query: 181 DLGTTLDNPDQPDRHLLYLQAQ 202
           D     +  +  D   ++   +
Sbjct: 282 DKPDLRNPIEIIDVSNIFKDKK 303



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 9/112 (8%)

Query: 240 RYP----APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            +P                D   +  ++L     E+      + D   Q+  F+  +  K
Sbjct: 448 HHPFTAVKNMDREILKNSPDLAISDSYDLIINGYEIGGGSVRIHDVNMQKQVFDI-IGIK 506

Query: 296 KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           K + NE +      +  L    P  +GIA+G DR+VML+T + NI +VI  P
Sbjct: 507 KSMQNEKFG---FLIEALKYGAPPHAGIALGLDRIVMLLTNSKNIRDVIAFP 555


>gi|294056657|ref|YP_003550315.1| aspartyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293615990|gb|ADE56145.1| aspartyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 595

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLY 77
             L  R+    ++R Y  E  F+E+++  L + +P      +            + +   
Sbjct: 140 NILRLRHKTSQAIRNYMDEEAFVEVETPMLFKSTPEGAREFLVPSRMNPGAFYALPQ--- 196

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    E +     
Sbjct: 197 ---SPQQYKQMLMVAGVERYYQLARCFRDEDLRADRQPEFTQLDIELSFIDREDMYALIE 253

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            ++         K      ++    +    ++  +A  R+  +D      + +  D   +
Sbjct: 254 GLM---------KRVWKDVLDVELETPFLRMSYFDAMNRF-GVDKPDMRFDMELQDCANI 303

Query: 198 YL 199
           + 
Sbjct: 304 FA 305



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 11/182 (6%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLGINCC 235
           +A  +         +       L  ++  + +   D     +    L+   E        
Sbjct: 393 FAATEWERACTILGRVRLDAAQLLVKRGKLTIDPSDYKFLWVIEFPLMLMDEEQGRFVAS 452

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
                 P  E              + ++L    +EL      +  P  Q+  FE  ++  
Sbjct: 453 HHPFTAPVEEDIPLLDSDPKKVRGQHYDLVLNGVELGGGSIRIHQPDVQKKVFEDVLKI- 511

Query: 296 KKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
                E   ++  F   L       P   GIA G DR+V ++    +I +VI  P +Q  
Sbjct: 512 -----EPDVVESRFGYMLKAFEYGAPPHGGIAFGLDRMVTILAQRTSIRDVIAFPKNQKG 566

Query: 352 QE 353
           QE
Sbjct: 567 QE 568


>gi|191638515|ref|YP_001987681.1| aspartyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|238693044|sp|B3WEM2|SYD_LACCB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|190712817|emb|CAQ66823.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Lactobacillus casei BL23]
 gi|327382551|gb|AEA54027.1| Aspartyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385748|gb|AEA57222.1| Aspartyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 601

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +  R  I  S+  +  +N FI++++ +L   +P     ++            
Sbjct: 135 RRPEMQKNIFTRAHIMRSVHHFLDDNGFIDVETPTLTASTPEGARDYLVPSRVYPGSFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQPEFTQIDLETSFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I                   +     + IT  +A  +Y +       D   Q
Sbjct: 249 IQDITEGLIAKVMHDVKG---------IDVKLPFDRITWQDAMDKYGSDKPDLRFDMQIQ 299

Query: 192 PDRHLLYL 199
               L+  
Sbjct: 300 DVSELVKD 307



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 49/169 (28%), Gaps = 26/169 (15%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE-------PNLGINCCTILDRYPAPESA 247
               + A   G    H      +                          +   +P     
Sbjct: 396 DKAKVVADALGYLRTHFGHDLGLIDEQAFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPN 455

Query: 248 LANIY--PADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEK-----EMQEKKKI 298
             +++    DP     + +++     EL      + +   Q    +      E  +K   
Sbjct: 456 EEDVHLLDTDPHAAHAQSYDIVLNGYELGGGSIRIHNREIQGKMLKALGFTPERAQKSFG 515

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                      L  L    P   G+A+G DR VML+TG +NI +VI  P
Sbjct: 516 ---------FLLNALDYGFPPHGGLAIGLDRFVMLLTGRDNIRDVIAFP 555


>gi|238926284|ref|ZP_04658044.1| aspartyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
 gi|238885964|gb|EEQ49602.1| aspartyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
          Length = 598

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 71/194 (36%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                +  ++ R+ +   +R++F  + F+EI++  L + +P      R F     +    
Sbjct: 141 RRPEMQANMILRHRVTKIMRDFFDRSGFLEIETPMLCKSTPEG---ARDFLVPSRLN--- 194

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G EK F     +R+ +     QPEFT L+   +    + 
Sbjct: 195 PGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQPEFTQLDIEMSFMDQDS 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++   E +            +     +     +   R+  ++L    D    
Sbjct: 255 ILTLMEGMVKELFEKSIGAKIETPFQRMSWDEAMDRFGSDKPDLRF-GMELQDITDYVGG 313

Query: 192 PDRHLLYLQAQQAG 205
            D  +     +  G
Sbjct: 314 SDFKVFNAVMEAGG 327



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 48/165 (29%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+       +  +    + E                 P  E         
Sbjct: 414 ELRLEMGRRRGLIDPDALRFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDVPFLKSDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                  +++    +E+      +     Q   FE      +E + +       +     
Sbjct: 474 GRVKANAYDMVLNGVEIGGGSLRIYSSDLQEQVFEALGFTPEEARARFGFMMNAFE---- 529

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                   P   G+A G DRLVML+    +I +VI  P +QS  +
Sbjct: 530 -----YGTPPHGGLAFGLDRLVMLMAKRRSIRDVIAFPKTQSASD 569


>gi|304437074|ref|ZP_07397037.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370025|gb|EFM23687.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 602

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 71/194 (36%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                +  ++ R+ +   +R++F  + F+EI++  L + +P      R F     +    
Sbjct: 141 RRPEMQANMILRHRVTKIMRDFFDRSGFLEIETPMLCKSTPEG---ARDFLVPSRLN--- 194

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G EK F     +R+ +     QPEFT L+   +    + 
Sbjct: 195 PGEFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQPEFTQLDIEMSFMDQDS 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++   E +            +     +     +   R+  ++L    D    
Sbjct: 255 ILTLMEGMVKELFEKSIGAKIETPFQRMSWDEAMDRFGSDKPDLRF-GMELQDITDYVGG 313

Query: 192 PDRHLLYLQAQQAG 205
            D  +     +  G
Sbjct: 314 SDFKVFNAVMEAGG 327



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 48/165 (29%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+       +  +    + E                 P  E         
Sbjct: 414 ELRLEMGRRRGLIDPDALRFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDVPFLKSDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                  +++    +E+      +     Q   FE      +E + +       +     
Sbjct: 474 GRVKANAYDMVLNGVEIGGGSLRIYSSDLQEQVFEALGFTPEEARARFGFMMNAFE---- 529

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                   P   G+A G DRLVML+    +I +VI  P +QS  +
Sbjct: 530 -----YGTPPHGGLAFGLDRLVMLMAKRRSIRDVIAFPKTQSASD 569


>gi|153951485|ref|YP_001398402.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166225335|sp|A7H4H2|SYD_CAMJD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|152938931|gb|ABS43672.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 583

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 77/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 179 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++      ++   +   ++I + F+ +      E       +     
Sbjct: 233 QIDVEMSFCEKKDVINVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLRFDL 292

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 293 KFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEE 343



 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EQNDDGSYSAMHHPFTMPKNIDENDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 495

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 496 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 545

Query: 342 VIWTP 346
           VI  P
Sbjct: 546 VIAFP 550


>gi|116495009|ref|YP_806743.1| aspartyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227534983|ref|ZP_03965032.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239631396|ref|ZP_04674427.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066572|ref|YP_003788595.1| aspartyl-tRNa synthetase [Lactobacillus casei str. Zhang]
 gi|122263574|sp|Q038S1|SYD_LACC3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116105159|gb|ABJ70301.1| aspartyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|227187374|gb|EEI67441.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239525861|gb|EEQ64862.1| aspartyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300438979|gb|ADK18745.1| Aspartyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 601

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +  R  I  S+  +  +N FI++++ +L   +P     ++            
Sbjct: 135 RRPEMQKNIFTRAHIMRSVHHFLDDNGFIDVETPTLTASTPEGARDYLVPSRVYPGSFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQPEFTQIDLETSFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I                   +     + IT  +A  +Y +       D   Q
Sbjct: 249 IQDITEGLIAKVMHDVKG---------IDVKLPFDRITWQDAMDKYGSDKPDLRFDMQIQ 299

Query: 192 PDRHLLYL 199
               L+  
Sbjct: 300 DVSELVKD 307



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 49/169 (28%), Gaps = 26/169 (15%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE-------PNLGINCCTILDRYPAPESA 247
               + A   G    H      +                          +   +P     
Sbjct: 396 DKAKVVADALGYLRTHFGHDLGLIDEQAFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPN 455

Query: 248 LANIY--PADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEK-----EMQEKKKI 298
             +++    DP     + +++     EL      + +   Q    +      E  +K   
Sbjct: 456 EEDVHLLDTDPHAAHAQSYDIVLNGYELGGGSIRIHNREIQEKMLKALGFTPERAQKSFG 515

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                      L  L    P   G+A+G DR VML+TG +NI +VI  P
Sbjct: 516 ---------FLLNALDYGFPPHGGLAIGLDRFVMLLTGRDNIRDVIAFP 555


>gi|254000153|ref|YP_003052216.1| aspartyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253986832|gb|ACT51689.1| aspartyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 594

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 76/196 (38%), Gaps = 19/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R  +  +LR++   N FIE+++  L   +P     ++            
Sbjct: 131 RRPAMQKNMMLRYRVAKTLRDHLDSNGFIEVETPMLTRSTPEGARDYLVPSRVHH----- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E+
Sbjct: 186 -GQFFALPQSPQLFKQLLMVSGFDRYFQITKCFRDEDLRADRQPEFTQVDIETSFLGEEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M    ++IR   +            + +  ++   +  +EA  +Y +   D+  TL+  
Sbjct: 245 IMNIVEDMIRKMFKSV---------QDIDLPAQFPRMPFSEAMNKYGSDKPDMRVTLEIT 295

Query: 190 DQPDRHLLYLQAQQAG 205
           +  D          AG
Sbjct: 296 ELTDIMKDVDFKVFAG 311



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 43/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G           +    + E  E              P            
Sbjct: 411 ALRTKVGHEKGHVDGRAWAPLWVVDFPMFEHDEEADRWVALHHPFTSPKDGHEDLLTTNP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               +K +++     E+      +     Q   F+     K+    E        L  L 
Sbjct: 471 GAALSKAYDMVLNGWEVGGGSVRIHKQEVQSKVFDALKISKE----EAQEKFGFLLDALQ 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DRLV L+ GA +I +VI  P
Sbjct: 527 YGAPPHGGLAFGLDRLVTLMAGAESIRDVIAFP 559


>gi|241766054|ref|ZP_04763970.1| aspartyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241363935|gb|EER59223.1| aspartyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 614

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 20/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +   +R++   N FI+I++  L   +P     ++            
Sbjct: 143 RRPYMQNNLMLRYRVSMEVRKFLDANGFIDIETPMLTKSTPEGARDYLVPSRVHDGHFFA 202

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 203 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFMDEQE 256

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +I+   +                  E   +T  +A  RY +   DL   L+  
Sbjct: 257 IRDMFQGMIKTVFQNTLGVDLG----------EFPVMTYQDAAYRYGSDKPDLRVKLEFT 306

Query: 190 DQPD 193
           +  D
Sbjct: 307 ELTD 310



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 56/184 (30%), Gaps = 8/184 (4%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHL--LYLQAQQAGIRVAHDDTWSDIFSRILI 223
           E     +    +   D    +++     R         ++ G+          +    + 
Sbjct: 399 ERTGAQDGDLIFFGADKEKIVNDAIGALRIKIGHSEFGKKNGL-FDDRWAPLWVVDFPMF 457

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E +            P        +   +   +K +++     E+      +     
Sbjct: 458 EHDEESDRWVAVHHPFTAPKDGHEDYMVTAPEKCISKGYDMVLNGWEMGGGSVRIHRADV 517

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+  F+      K    E        L  L    P   G+A G DR+V L+TGA +I +V
Sbjct: 518 QQKVFD----ALKITPEEAQQKFGFLLDALQYGAPPHGGLAFGLDRIVTLMTGAESIRDV 573

Query: 343 IWTP 346
           I  P
Sbjct: 574 IAFP 577


>gi|225568634|ref|ZP_03777659.1| hypothetical protein CLOHYLEM_04712 [Clostridium hylemonae DSM
           15053]
 gi|225162562|gb|EEG75181.1| hypothetical protein CLOHYLEM_04712 [Clostridium hylemonae DSM
           15053]
          Length = 595

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 68/196 (34%), Gaps = 18/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ + +  R++  E  F+EI++  L   +P     ++            
Sbjct: 141 RRPDLQKNMIMRSQVATLTRQFLAEEGFLEIETPILIGSTPEGARDYLVPSRIHQGHFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                      +T  EA  RY   D   T    + 
Sbjct: 255 VIDVNERLLAKLFKDVLGVEVV---------LPIPRMTWQEAMDRY-GSDKPDTRFGMEL 304

Query: 192 PDRHLLYLQAQQAGIR 207
            D   +    + A  +
Sbjct: 305 TDVTDVVKDCEFAVFK 320



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 49/157 (31%), Gaps = 7/157 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  +    +  +  +    L+E  E              P  E         
Sbjct: 415 NLRLELARQMELLDKSEYKFLWVTEFPLLEWNEEQERYTAMHHPFTMPMEEDLEYIDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                K +++     E+      +     Q   FE           E         L   
Sbjct: 475 GRVRAKAYDIVLNGNEIGGGSVRIYHQDVQNKMFEVL-----GFTPEKAQEQFGFLLNAF 529

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              +P  +G+A G DR+VML+   ++I +VI  P  +
Sbjct: 530 KYGVPPHAGLAYGLDRMVMLMAKEDSIRDVIAFPKVK 566


>gi|254368450|ref|ZP_04984467.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121344|gb|EDO65545.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 592

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 133 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 189 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  + +T A+A  +Y +      +     
Sbjct: 247 IMSTMERMIAGLFKETIG---------VEFATPFQVMTFADAIDKYGSDKPDLRIPLEFV 297

Query: 192 PDRHLLYLQAQQ 203
             +  +  +  +
Sbjct: 298 NIKEDMQNEEFK 309



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 10/141 (7%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRF--TKRFELYACNIE 270
             ++ + +         +       +P      S++ ++   +P    ++ +++     E
Sbjct: 427 KDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRAYDMVINGYE 486

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F           +E        L  L    P   GIA G DRL
Sbjct: 487 VGGGSIRIHKQDIQAKVF----NLLGISDDEAREKFGFMLDALSYGTPIHGGIAFGVDRL 542

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TG  NI +VI  P +Q+
Sbjct: 543 IMLLTGTTNIRDVIAFPKTQT 563


>gi|254372109|ref|ZP_04987602.1| aspartyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151569840|gb|EDN35494.1| aspartyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 592

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 133 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 189 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  + +T A+A  +Y +      +     
Sbjct: 247 IMSAMERMIAGLFKETIG---------VEFATPFQVMTFADAIDKYGSDKPDLRIPLEFV 297

Query: 192 PDRHLLYLQAQQ 203
             +  +  +  +
Sbjct: 298 NIKEDMQNEEFK 309



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 10/141 (7%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRF--TKRFELYACNIE 270
             ++ + +         +       +P      S++ ++   +P    ++ +++     E
Sbjct: 427 KDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRAYDMVINGYE 486

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F           +E        L  L    P   GIA G DRL
Sbjct: 487 VGGGSIRIHKQDIQAKVF----NLLGISDDEAREKFGFMLDALSYGTPIHGGIAFGVDRL 542

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TG  NI +VI  P +Q+
Sbjct: 543 IMLLTGTTNIRDVIAFPKTQT 563


>gi|292669402|ref|ZP_06602828.1| aspartate-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648963|gb|EFF66935.1| aspartate-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 602

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 8/168 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                +  ++ R+ +   +R++F  + F+EI++  L + +P      R F     +    
Sbjct: 141 RRPEMQANMILRHRVTKIMRDFFDRSGFLEIETPMLCKSTPEGA---RDFLVPSRLNAG- 196

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G EK F     +R+ +     QPEFT L+   +    + 
Sbjct: 197 --EFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQPEFTQLDIEMSFMDQDS 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++     +++   E +                  E     +   R+  
Sbjct: 255 ILTLMEEMVKELFEKSIGAKIETPFRRMAWDEAMERFGSDKPDLRFGM 302



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 15/143 (10%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +    + E                 P  E                +++    +E+     
Sbjct: 436 VVDFPMFEYSAEEKRFKAMHHPFTAPRDEDIPLLATDPGRVKANAYDMVLNGVEIGGGSL 495

Query: 277 ELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLV 330
            +     Q   FE      +E +E+       +             P   G+A G DRLV
Sbjct: 496 RIYRSDLQEQVFETLGFTPEEARERFGFMMNAFE---------YGTPPHGGLAFGLDRLV 546

Query: 331 MLVTGANNINEVIWTPFSQSNQE 353
           ML+    +I +VI  P +QS  +
Sbjct: 547 MLMAKRRSIRDVIPFPKTQSASD 569


>gi|332360523|gb|EGJ38333.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 578

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 57/180 (31%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            E   R+   D    L    +  R    L   +  +  A D     +   +      +  
Sbjct: 374 QELLTRFEAKDGDLILLVMAKKRRAQEALGHLRLEVAKALDLIDPSLLHFLWVVDWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +    +        +  +++     E+      + D   Q   F
Sbjct: 434 WNEDQNRYQAMHHPFTQGIFEDGQEPGQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEAMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        I  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 494 E-----LLGIGREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 548



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 88/278 (31%), Gaps = 27/278 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKAVVKKTHGLELT---------EAFPAISYEEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
               L    +   I+ A D+        ++   +           L  Y           
Sbjct: 296 SLTDLCQSNESLLIKKALDN-----QEEVMGICVPDAASAFSKKQLSHYYQEMKEFGC-S 349

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +  +L            E     E   RFE 
Sbjct: 350 RFASLKVENGQLV--GDLASTFEAE---SQELLTRFEA 382


>gi|322420289|ref|YP_004199512.1| aspartyl-tRNA synthetase [Geobacter sp. M18]
 gi|320126676|gb|ADW14236.1| aspartyl-tRNA synthetase [Geobacter sp. M18]
          Length = 594

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 51/152 (33%), Gaps = 13/152 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A + G+   ++  +  I    L+E  E              P  E              
Sbjct: 419 LAAKMGLTDPNEFRFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLQYVESDPGRCRA 478

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT- 314
           K ++L     E+      +     Q   F+     E   + K            L  L  
Sbjct: 479 KAYDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFG--------FLLDALEY 530

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DRL+ML+TG+++I +VI  P
Sbjct: 531 GTPPHGGIAFGLDRLMMLITGSDSIRDVIAFP 562



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 72/199 (36%), Gaps = 21/199 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  ++ R+ +    R Y  +N F+E+++  L   +P      R F     I    +   Y
Sbjct: 146 QQNMILRSKVAQLTRSYLTDNGFLELETPFLTKSTPEG---ARDFLVPSRIN---KGEFY 199

Query: 78  -LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E ++   
Sbjct: 200 ALPQSPQLFKQILMVSGFDRYFQVVRCFRDEDLRADRQPEFTQIDCEMSFIDREDIITVM 259

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             ++      A                  + +T  EA  R+  +D        +  +   
Sbjct: 260 EGLMARIFSEARGVKVE---------LPIQRMTYQEAIRRF-GVDNPDLRFGLELVE--- 306

Query: 197 LYLQAQQAGIRVAHDDTWS 215
           L    + +G +V  D    
Sbjct: 307 LSDIVKDSGFKVFADVVKG 325


>gi|121591625|ref|ZP_01678871.1| aspartyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121546519|gb|EAX56729.1| aspartyl-tRNA synthetase [Vibrio cholerae 2740-80]
          Length = 540

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELL----------NVDLGDFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318


>gi|145590071|ref|YP_001156668.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048477|gb|ABP35104.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 599

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 46/146 (31%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+          +    + +  E       C      P  E              K 
Sbjct: 424 KEHGL-FTEGWKPLWVVDFPMFDYDEGEARWVACHHPFTSPKDEHMQYLESDPGKCLAKA 482

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     E+      +   + Q   F    +  K    E        L  L    P   
Sbjct: 483 YDMVLNGSEIGGGSVRIHQEVVQSQVF----RALKIGAEEAQAKFGFLLDALQYGAPPHG 538

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DR+V ++TGA +I +VI  P
Sbjct: 539 GIAFGLDRIVTMMTGAESIRDVIAFP 564



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 25/205 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R Y  +  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQKNLRLRYNVAMECRRYLDDAGFIDIETPMLTKSTPEGARDYLVPSRVHD----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   A  S  +
Sbjct: 188 -GQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDCETAFLSELE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLG 183
           + +   N+IR             + +N    +    +  +E  AR+         N +  
Sbjct: 247 IRELFENMIRH---------IFKKTMNVELPNPFPTMPYSEGMARFGSDKPDLRVNFEFT 297

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRV 208
              D     D  +    A Q G RV
Sbjct: 298 ELTDLMKDVDFKVFSGAANQDGGRV 322


>gi|332523744|ref|ZP_08399996.1| aspartate--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332315008|gb|EGJ27993.1| aspartate--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 582

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 70/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R               R  +  S+R Y  +  FI++++  L   +P     ++ 
Sbjct: 122 ETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLDFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +              +      +    +   R+  +
Sbjct: 236 DLETSFLSEQEIQDLVEGMIAKVMKDTKGIDVKLPFPRMSYDDAMNFYGSDKPDTRFDML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T    D   +      A +   ++   D        ++   
Sbjct: 296 LQDLTQLVKDVDFKVFSEAPAVKAIVVKDKADQFSRKDIDKLTEF 340



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 46/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    + E  E              P   SA       
Sbjct: 402 ALRNRLAKELGLIDNKKFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPTEASAKELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++     EL      +     Q   F+     +              L  + 
Sbjct: 462 AKVRAVAYDIVLNGYELGGGSLRINHRDMQERMFKALGFTRDA----ANEQFGFLLEAMD 517

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 518 YGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|319956652|ref|YP_004167915.1| aspartate--tRNA(asn) ligase [Nitratifractor salsuginis DSM 16511]
 gi|319419056|gb|ADV46166.1| aspartate--tRNA(Asn) ligase [Nitratifractor salsuginis DSM 16511]
          Length = 592

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 79/219 (36%), Gaps = 11/219 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +       R+    + R    E  F+E+++  L   +P     ++            
Sbjct: 132 RTPKMHKIFRLRSQAAIAARNSLAEMGFMEVETPVLTKSTPEGARDYLVPSRVWPGEFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E+
Sbjct: 192 LPQ------SPQLFKQLLMISGFDRYFQIAKCFRDEDLRADRQPEFTQIDVEMSFCDQEK 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +IR      +Q            + E      ++       +++   +D  ++
Sbjct: 246 VIEVAERLIRDIWAACDQWEKLPAQFPRMSYDEAMEKYGSDKPDLRFGLEMVDVIDIFER 305

Query: 192 PDRHLLYLQA---QQAGIRVAHDDTWSDIFSRILIEKIE 227
            D  +    A   ++  I+        +IFS+  ++  E
Sbjct: 306 CDNEIFSTIAKSPKKNRIKALKVPNGDNIFSKRQMKGFE 344



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 39/113 (34%), Gaps = 10/113 (8%)

Query: 240 RYPAPESALANIYPADPRFTKR-----FELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            +P     L      D    +      ++L     EL      +  P  Q+  F    + 
Sbjct: 448 HHPFTMPKLNEKGGLDYEEIEDLKSVAYDLVLNGTELGGGSIRIHKPEIQKEVF----KL 503

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 E        L  L    P   G AMGFDR++ML+ G  +I +VI  P
Sbjct: 504 LGISDEEAKEKFGFLLEALEFGAPPHGGFAMGFDRMIMLLAGTESIRDVIAFP 556


>gi|269792196|ref|YP_003317100.1| aspartyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099831|gb|ACZ18818.1| aspartyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 599

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 61/171 (35%), Gaps = 15/171 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R +  L  R+      R Y V+N F+E+++  L   +P      R F     +    
Sbjct: 145 RRERMQHNLRVRSAAAQFTRNYLVQNGFLEVETPMLTKSTPEG---ARDFLVPSRVN--P 199

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +  + E +
Sbjct: 200 GKFFALPQSPQIFKQILMVSGCDRYFQIVKCFRDEDLRADRQPEFTQVDLEMSFITEEDV 259

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
                  +R   +    +            +    IT  EA   Y +    
Sbjct: 260 FSLLEGYMRGLFKEILGEEIP---------TPFRRITWREAMDLYGSDKPD 301



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 47/142 (33%), Gaps = 9/142 (6%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           V     +  +    L E  +              P  E             ++ ++L   
Sbjct: 430 VEEGWRFLWVVDFPLFEWDQEEGRYVSVHHPFTSPKEEDLDLMERDPGSVRSRAYDLVLN 489

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQSSGIAM 324
             E+      +  P+ Q   F      K   + E    D     L  L    P   G+A+
Sbjct: 490 GSEVGGGSIRIHHPVVQERVF------KALGFEEEQLRDRFGFLLDALSYGTPPHGGLAL 543

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           GFDRL M++ GA +I EV+  P
Sbjct: 544 GFDRLTMMLCGARSIREVMAFP 565


>gi|320093764|ref|ZP_08025612.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319979301|gb|EFW10796.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 664

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 74/220 (33%), Gaps = 25/220 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +R  L  R+M+  + R+    + F+EI++ +L   +P      R F     +    
Sbjct: 199 REPEQRA-LRLRSMVSRAARDTLYAHDFVEIETPTLTRSTPEG---ARDFIVPARL--AP 252

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ F  A  +R+ +     QPEFT L+   +    + +
Sbjct: 253 GSWYALPQSPQLFKQMLMVAGMERYFQIARCYRDEDFRADRQPEFTQLDIEMSFVDQDDV 312

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGT 184
           +    +++R    +    + +              +T  +A  RY          ++L  
Sbjct: 313 IAVAEDVLRNVWALIGYDLAT----------PIPRMTYKDAMERYGSDKPDLRFGLELTE 362

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
             D        +       A +           F +    
Sbjct: 363 LTDYFKDTPFRVFQAPYVGAVVMPGGGSQPRRTFDKWQEW 402



 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P+    + +  DP       +++     E+      +     Q   F          
Sbjct: 520 FTSPKPEWVDSFDEDPGNALAYAYDIVCNGNEIGGGSIRIHRRDVQNRVF----AVMGIG 575

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   G+A G+DR+V L+T + +I +VI  P
Sbjct: 576 EEEAQAQFGFLLDAFKFGAPPHGGVAFGWDRIVALLTKSESIRDVIAFP 624


>gi|258512004|ref|YP_003185438.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478730|gb|ACV59049.1| aspartyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 600

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+    + R Y  ++ F+EI++  L   +P     ++     +      
Sbjct: 146 RRPEMQRIFALRHQAIRAFRRYLDDHGFLEIETPMLTKSTPEGARDYLVPSRLQPGEFYA 205

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    ++
Sbjct: 206 LPQ------SPQIFKQLLMVAGFERYYQVARCFRDEDLRADRQPEFTQLDIETSFLPKDE 259

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           LM     ++    +            +         +   EA  +Y   D        + 
Sbjct: 260 LMSMMEEMMASVFKEV---------ADIEVPRPFLRLPYQEAMDKY-GSDKPDLRFGMEM 309

Query: 192 PDRHLLYL 199
            D   L+ 
Sbjct: 310 ADLADLFE 317



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 47/156 (30%), Gaps = 11/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           Q+ G+       +  +    L+   E              P  E              + 
Sbjct: 426 QELGLIDESQYRFLWVTDFPLLSWDEEEKRWVAEHHPFTMPREEDIPLLDTDPGRVRAQA 485

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY---NETYPIDEDFLACLT-EMP 317
           +++     E+      +     Q   F         +     E        L       P
Sbjct: 486 YDMVLNGYEIGGGSMRIYRRDVQEKMF-------AALGFSPEEAQEKFGFLLNAFEYGTP 538

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              GIA G DR++ML+TGA ++ +VI  P + S  +
Sbjct: 539 PHGGIAFGLDRMIMLLTGAKSLRDVIAFPKTASGTD 574


>gi|325693546|gb|EGD35465.1| aspartate--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 578

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 58/179 (32%), Gaps = 9/179 (5%)

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPN 229
           +  AR+   D    L    +  R    L   +  +  A D     +   +      +   
Sbjct: 375 DLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVAKALDLIDPSLLHFLWVVDWPLLEW 434

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                      +P  +         D   +  +++     E+      + D   Q   FE
Sbjct: 435 NEDQNRYQAMHHPFTQGIFEEGQEPDQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEAMFE 494

Query: 290 KEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   +  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 495 -----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 548



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 87/278 (31%), Gaps = 27/278 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNRLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQLVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKAVVKKTHGLELT---------EAFPTISYEEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           +   L        I+ A D         ++   +           L  Y           
Sbjct: 296 NLTDLCQSNDSLLIKKALDS-----QEEVMGICVPDAASAFSKKQLSHYYQEMKEFGC-S 349

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +  +L            E  D      RFE 
Sbjct: 350 RFASLKVENSQLV--GDLASTFEAESRD---LLARFEA 382


>gi|315638545|ref|ZP_07893721.1| aspartate--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481389|gb|EFU72017.1| aspartate--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 583

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 18/206 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            + R       R+    + R       F+E+++  L   +P     ++            
Sbjct: 132 RNPRLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDYLVPSRVHQGEFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ A  ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 192 LPQ------SPQLFKQLLMCANFDRYFQIAKCFRDEDLRADRQPEFTQIDVEMSFCEQKD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M      ++       ++I +              ++  EA   Y +       D    
Sbjct: 246 VMAVAETFLKDIFAACGKQIRT----------PFRQMSYKEAMENYGSDKPDLRFDLKLI 295

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
               +      +    +A D   + I
Sbjct: 296 DVIDIFAKSNNEIFTNIAKDPYKNRI 321



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EKNDDGSYSAMHHPFTMPKNIDEENLEEISSIAYDVVLNGVELGGGSIRIHKNEIQQKVF 495

Query: 289 E----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           +     E ++++K            L  L+   P   GIA+G DRL+MLV+ A++I EVI
Sbjct: 496 KLLNINEEEQREKFG--------FLLDALSFGAPPHGGIAIGLDRLIMLVSKASSIREVI 547

Query: 344 WTP 346
             P
Sbjct: 548 AFP 550


>gi|238898055|ref|YP_002923736.1| aspartate tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511863|sp|C4K4U5|SYD_HAMD5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229465814|gb|ACQ67588.1| aspartate tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 589

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R+ I S +R++  +  F+++++ +L   +P     ++     +      
Sbjct: 130 RRPEMLARLKTRSKITSFVRQFLDKEGFLDVETPTLTKATPEGARDYLVPSRVQKGKFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q
Sbjct: 190 LPQ------SPQLFKQLLMVSGVDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAQQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR        K           F E      ++       ++L    D    
Sbjct: 244 VRTVTEKLIRQLWLQI--KNIHLGAFPVMTFEEAIRRFGSDKPDLRNPLELVDLDDVLKN 301

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A  A  RV
Sbjct: 302 VDFKVFSEPANDAHSRV 318



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G+         P   +        +      +++     E+      +     Q+  F
Sbjct: 441 ETGLTAMHHPFTSPKNTNLSEFAANPETALANAYDMVINGYEVGGGSVRIHHSDLQQQVF 500

Query: 289 ----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
                +  Q+K++            L  L    P  +GIA G DRLVML+TG NNI +VI
Sbjct: 501 SLIGIEANQQKQQFG--------FLLEALKYGAPPHAGIAFGLDRLVMLLTGTNNIRDVI 552

Query: 344 WTP 346
             P
Sbjct: 553 AFP 555


>gi|229549691|ref|ZP_04438416.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255972389|ref|ZP_05422975.1| aspartyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257422241|ref|ZP_05599231.1| aspartyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|312951290|ref|ZP_07770191.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229305171|gb|EEN71167.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255963407|gb|EET95883.1| aspartyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257164065|gb|EEU94025.1| aspartyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|310630726|gb|EFQ14009.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315152596|gb|EFT96612.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315159884|gb|EFU03901.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 589

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 22/188 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP     +  R+ +  ++R Y   + F++I++  L + +P     ++            
Sbjct: 135 RRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQIDIETTFLTPEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     N++    +       S              ++  EA ARY   D   T    + 
Sbjct: 249 IQTYTENMLAEVMKETKGIEIS---------VPFPRMSYDEAMARY-GSDKPDTRFAMEL 298

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 299 IDVAEVVK 306



 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 46/146 (31%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    L E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   FE     K+    E        L  L    P   
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKE----EAQDQFGFLLDALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DRL ML+ G  NI EVI  P
Sbjct: 531 GIALGLDRLAMLLAGEENIREVIAFP 556


>gi|254375257|ref|ZP_04990737.1| aspartyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151572975|gb|EDN38629.1| aspartyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 592

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 65/189 (34%), Gaps = 17/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 133 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 189 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  + +T A+A  +Y +      +     
Sbjct: 247 IMSTMERMIAGLFKETIG---------VEFATPFQVMTFADAIDKYGSDKPDLRIPLEFV 297

Query: 192 PDRHLLYLQ 200
             +  +  +
Sbjct: 298 NIKEDMQNE 306



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 50/141 (35%), Gaps = 10/141 (7%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRF--TKRFELYACNIE 270
             ++ + +         +       +P      S++ ++   +P    ++ +++     E
Sbjct: 427 KDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRAYDMVINGYE 486

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F            E        L  L    P   GIA G DRL
Sbjct: 487 VGGGSIRIHKQDIQAKVF----NLLGISDEEAREKFGFMLDALSYGTPIHGGIAFGVDRL 542

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TG  NI +VI  P +Q+
Sbjct: 543 IMLLTGTTNIRDVIAFPKTQT 563


>gi|225548085|ref|ZP_03769370.1| hypothetical protein RUMHYD_00064 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040761|gb|EEG51007.1| hypothetical protein RUMHYD_00064 [Blautia hydrogenotrophica DSM
           10507]
          Length = 599

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 68/196 (34%), Gaps = 18/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ + +  R++F +  F+EI++  L   +P     ++            
Sbjct: 141 RRPDLQRNLMLRSQVATLTRQFFAQEGFLEIETPMLTKSTPEGARDYLVPSRVHQGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIFKQLLMCSGYDRYIQIARCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      +    +       S            + IT  EA  R+   D        + 
Sbjct: 255 VLDVNERFLAFLFKEVLGVEVS---------LPIQRITWQEAMDRF-GSDKPDMRFGMEL 304

Query: 192 PDRHLLYLQAQQAGIR 207
            D   +    + A  +
Sbjct: 305 QDVSEVVKDCEFAVFK 320



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 53/160 (33%), Gaps = 9/160 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP--APESALANIY 252
            +L     + G ++   D     F  +    +              +P          + 
Sbjct: 411 DVLGALRLELGRQMELMDKNEFRFVWVTEFPLLEWSEEEERYTAMHHPFTMLMDEDLPLL 470

Query: 253 PADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             +P     K +++     E+      +     Q   FE     K+      Y      L
Sbjct: 471 DTEPGKVRAKAYDIVLNGNEIGGGSVRIFQNDVQERMFEVLGFTKEA----AYEQFGFLL 526

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                 +P  +G+A G DRLVML+ GA++I EVI  P  +
Sbjct: 527 NAFKYGVPPHAGLAYGLDRLVMLMAGADSIREVIAFPKVK 566


>gi|207340581|gb|EDZ68888.1| YPL104Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 362

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 78/204 (38%), Gaps = 7/204 (3%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +  + + + FL KR+ I   +R  F    F E+++  L + +P      R F 
Sbjct: 148 PPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNFDFTEVETPMLFKATPEG---AREFL 204

Query: 64  TELIIQDHIRKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                +    KP +  L  SP+   + L+A+G  K +  A  +R+ +     QPEFT ++
Sbjct: 205 VPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQPEFTQVD 264

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A  + E +MK     +       ++K       +       E      +  R    +
Sbjct: 265 MEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPDEKGNGTVSIFRMTY-E 323

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAG 205
              T    D+PD     L+    G
Sbjct: 324 QAMTSYGIDKPDLRAPDLKIINLG 347


>gi|313890356|ref|ZP_07823987.1| aspartate--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121199|gb|EFR44307.1| aspartate--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 582

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 69/225 (30%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R               R  +  S+R Y  +  FI++++  L   +P     ++ 
Sbjct: 122 ETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLDFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +                     +    +   R+  +
Sbjct: 236 DLETSFLSEQEIQDLVEGMIAKVMKDTKGVDVKLPFPRMAYDDAMNFYGSDKPDTRFDML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T        +     QA +   ++   D        ++   
Sbjct: 296 LQDLTSLVKGLDFKVFSEAQAVKAIVVKDKADQFSRKDIDKLTEF 340



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 50/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +   +   +  +    + E  E              P  ESAL      
Sbjct: 402 ALRNRLAKELDLIDNNKFNFLWVVDWPMFEWSEEENRYMSAHHPFTLPTEESALELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++     EL      +     Q   F+     K+    +        L  + 
Sbjct: 462 TKVRAVAYDIVLNGYELGGGSLRINQKDMQERMFKALGFTKE----DANEQFGFLLEAMD 517

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 518 YGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|312877306|ref|ZP_07737273.1| aspartyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795939|gb|EFR12301.1| aspartyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 594

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +   +R +  +N FIEI++  L   +P     ++            
Sbjct: 140 RRPNMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLVPSRIFPGKFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 200 LPQ------SPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQPEFTQIDIEMSFVDVDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +++                        E     +   R+  ++L    D    
Sbjct: 254 VIEINEKLLQTIFGEMLGIDLKLPLPRLTYKEAMERFGSDKPDTRF-GMELVDITDIVKN 312

Query: 192 PDRHLLYLQAQQAG 205
            +  +    A + G
Sbjct: 313 CEFKVFSDAANKGG 326



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 49/158 (31%), Gaps = 9/158 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A++  +          +    L E  E              P  E         
Sbjct: 414 NLRLEIARKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDIEFLETDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
               +K +++     E+      +  P  Q+  F      K   + E    D     L  
Sbjct: 474 AKVKSKAYDIVLNGTEIGGGSIRIHSPEIQKRMF------KALGFTEERAQDRFGFLLEA 527

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                P   GIA GFDRL ML+ G ++I + I  P  +
Sbjct: 528 FKYGTPPHGGIAYGFDRLCMLLLGLDSIRDTIAFPKVK 565


>gi|240047691|ref|YP_002961079.1| Aspartyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985263|emb|CAT05276.1| Aspartyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 571

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 20/189 (10%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR      L+ R      +R++  EN F+EI++  L   +P      R+F      Q+H
Sbjct: 123 LRRNEMKQNLIFRYKFIHQIRQFLYENDFVEIETPILSKSTPEG---ARSFIVPTRKQNH 179

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G  + F FA A+R+ +     Q EFT L+   A  + E 
Sbjct: 180 F---FALPQSPQLYKQLLMVSGFNRYFQFARAFRDEDLRKDRQFEFTQLDMEFAFPTIES 236

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K+   +++ +           +  +     +   I+  EA  +Y +        N   
Sbjct: 237 IQKNIEQLVKHSL----------RKFDFQFNEDFPQISYKEAIDKYGSDKPDLRFKNYLI 286

Query: 192 PDRHLLYLQ 200
               L   Q
Sbjct: 287 DASELDDDQ 295



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 13/164 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    AQ   +       ++ I    + EK E    I+           ES        
Sbjct: 388 ALRNKIAQMYDLIDTSSLKFAWIIDWPMFEKDEETQKISAAHHPFTMVDKESVYLLDSNP 447

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                + ++L     E+      ++D   Q   F+     E + K++            L
Sbjct: 448 LAARAQAYDLVLNGFEIGGGSIRIVDKKIQEKIFKIIGLSEQEAKQQFG--------FLL 499

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 +P   G A G DR +M++  A++I +VI  P +   Q+
Sbjct: 500 KAFSYGVPPHGGFAFGLDRFIMILRNASSIRDVIAFPVNSKGQD 543


>gi|222100026|ref|YP_002534594.1| Aspartyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254781759|sp|B9K8E5|SYD_THENN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221572416|gb|ACM23228.1| Aspartyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 579

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 66/178 (37%), Gaps = 16/178 (8%)

Query: 17  RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKP 75
           R R  ++ R  I   +R YF E  F+EI++  L   +P      R F     +     K 
Sbjct: 133 RMRDNIILRYNITRVIRRYFDELGFLEIETPFLTKSTPEG---ARDFLVPSRL--RPGKF 187

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E ++  
Sbjct: 188 YALPQSPQLFKQLLMISGFDRYFQIVRCFRDEDLRADRQPEFTQVDVEMSFVDVEDVLSV 247

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
              +I      A               +  + IT +EA  +Y   D        +  D
Sbjct: 248 SEGMIARVFREAIGMDLK---------TPFDRITYSEAMEKY-GTDKPDRRYGMELRD 295



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 42/152 (27%), Gaps = 8/152 (5%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L     ++    +A       +      E  E              P             
Sbjct: 404 LRLEIGKEYFSHLAKGFDILWVVDFPYFEWSEEEERFVARHHPFTMPVE---ETLGDDHT 460

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
               K +++     E+      +     Q   F    +       E       FL     
Sbjct: 461 KVKAKAYDIVINGYEVGGGSIRIHKREIQEKIF----KLLGMREEEAREKFGFFLEAFKY 516

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +P   GIA G DRLV ++ G N+I EVI  P
Sbjct: 517 GVPPHGGIAFGLDRLVAIIAGENSIREVIPFP 548


>gi|266631457|emb|CBA11568.1| asparaginyl-tRNA synthetase-like [Streptomyces lydicus]
          Length = 326

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 63/354 (17%), Positives = 103/354 (29%), Gaps = 44/354 (12%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETH 58
           M Q+P  P  + D   R R  L  +  I S+ R++     F+E+    +  +  PG    
Sbjct: 1   MSQLPPSPRKHLDS-PRTRAVLRIQQQIVSAARDHLRALGFVELLPPVIGPATDPGG-RG 58

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE----QGCLHQ 114
            +    +     +      L TS     +  L +  +KIFC A   R           H 
Sbjct: 59  AKQVDVDYYGHRYK-----LMTSAIMYKQAALLS-FDKIFCVAPNVRLEPPETCSTQRHL 112

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF   +   A    +  M    +++R A     +                       A 
Sbjct: 113 AEFHQFDVEIAGAGAQDAMGVAEDLVRAAVRSVTE--------------------QLPAD 152

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
                 D     D   QP   L +  A      + H+              +        
Sbjct: 153 LDVLGRDPDAFADLLAQPFDRLTHATAVAELAVLGHEQNPDAEIDWEGEAMLSRKA--TR 210

Query: 235 CTILDRYPA-PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              +  YP           P  P   + F+L            EL+   E R      + 
Sbjct: 211 PFFVTSYPKGSRGFYDREDPEVPGTLRNFDL-----LAAEGFGELISGAE-REFDHARIV 264

Query: 294 EKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            + +   E     + FL      +P S+G  +G +RL   V G + + E    P
Sbjct: 265 TRMRETGENPGKYQHFLEVAREGIPASAGFGIGIERLTRYVCGLDAVWEATAFP 318


>gi|237747323|ref|ZP_04577803.1| aspartyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378674|gb|EEO28765.1| aspartyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 605

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 42/140 (30%), Gaps = 5/140 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                    +    + E  E +     C      P                 K +++   
Sbjct: 433 FEESWKPLWVIDFPMFEYDEGDNRWVACHHPFTSPKDGHEDYLESDPGRCRAKAYDMVLN 492

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             EL      +     Q   F    +  K    E        L  L    P   G+A G 
Sbjct: 493 GWELGGGSIRIHKEEVQSKVF----RALKIGDGEAREKFGFLLDALQYGAPPHGGLAFGL 548

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DRLV L+TG+++I +VI  P
Sbjct: 549 DRLVTLMTGSDSIRDVIAFP 568



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 68/184 (36%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y   N FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQNNLRLRYKVAMEVRKYLDANGFIDIETPMLTKSTPEGARDYLVPSRVNPGEFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 193 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDCEMSFVEEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +     N+IR               +N         +T   A ARY +   DL   L+  
Sbjct: 247 VRDLFENMIRE---------IFANTMNTELPKPFPVMTHEMAMARYGSDKPDLRVKLEFT 297

Query: 190 DQPD 193
           +  D
Sbjct: 298 ELTD 301


>gi|170077050|ref|YP_001733688.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|238692810|sp|B1XNY9|SYD_SYNP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169884719|gb|ACA98432.1| aspartyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 596

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 22/182 (12%)

Query: 16  YRRRPF---LLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQ 69
            RR      L  R+ +  S+R +   +  F+E+++  L   +P     ++          
Sbjct: 136 LRRETMAKNLQLRHTVVKSMRRFLEDDENFMEVETPILTRSTPEGARDYLVPSRVNPGDW 195

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
             + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   +  S+
Sbjct: 196 YALPQ------SPQLFKQLLMVAGCDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSF 249

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           ++++     +I    + A                    IT AE+  +Y   D   T    
Sbjct: 250 DEIIDLNERLICRIFQDAQGIELE---------RPFPRITYAESMEKY-GCDRPDTRFGL 299

Query: 190 DQ 191
           + 
Sbjct: 300 EL 301



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 15/113 (13%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQ 293
            +P       ++          +++    IE+      +     Q   F      E E Q
Sbjct: 459 HHPFTAPNPEDLEDLATARALAYDIVLNGIEIGGGSLRIYQREVQEKVFQTIGLSETEAQ 518

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           EK     E +             P   GIA G DRLVML+   ++I +VI  P
Sbjct: 519 EKFGFLLEAFE---------YGTPPHGGIAYGLDRLVMLMAQEDSIRDVIAFP 562


>gi|284032291|ref|YP_003382222.1| aspartyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283811584|gb|ADB33423.1| aspartyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 596

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 77/214 (35%), Gaps = 33/214 (15%)

Query: 3   QIP---SQPWWNR---DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDS 46
            +P    +        +   + R            L  R+ +  + R+    + F+EI++
Sbjct: 103 PLPFPVEEHHATPVNEEVRLKYRYLDLRRQGPGAALRLRSKVNKAARDVLARHDFVEIET 162

Query: 47  MSLQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
            +L   +P      R F     +Q        L  SP+   + L+ AG E+ +  A  +R
Sbjct: 163 PTLTKSTPEG---ARDFLVPARLQ--PGSWYALPQSPQLFKQLLMVAGMERYYQIARCYR 217

Query: 106 NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
           + +     QPEFT L+   +    + ++     I+    ++A  ++ +            
Sbjct: 218 DEDFRADRQPEFTQLDVEMSFVDQDDVIALSEEILVELWKLAGHEVQT----------PI 267

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           + +T AEA AR+   D        +  +    + 
Sbjct: 268 QRMTYAEAMARF-GSDKPDLRMGLELVECTEYFK 300



 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 17/112 (15%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEK 295
           P PES  +            +++     E+      +     Q+  F      E+E  EK
Sbjct: 455 PKPESLDSFDTDPGSALAYAYDIVCNGNEIGGGSIRIHREDVQKRVFTVMGLTEEEATEK 514

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                         L       P   GIA G+DR+  L+ GA++I +VI  P
Sbjct: 515 FG----------FLLDAFKFGAPPHGGIAFGWDRITALLAGADSIRDVIAFP 556


>gi|148656111|ref|YP_001276316.1| aspartyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|229470565|sp|A5UUR3|SYD_ROSS1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148568221|gb|ABQ90366.1| aspartyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 589

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 69/182 (37%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R +  ++ R+ I   +R++     F+EI++  L   +P     ++            
Sbjct: 134 RRERMQRNIMLRHRIVKFIRDFLDREGFVEIETPILIKSTPEGARDYLVPSRLHPGKFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A  +R+ +Q    QPEFT L+   +      
Sbjct: 194 LPQ------SPQQLKQLLMVAGFDRYFQIARCFRDEDQRADRQPEFTQLDMEMSFVDQGD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++    +II        ++I   + +          +T AEA  R+   D        + 
Sbjct: 248 VL----DIIERLFTALCREIVPHKRLVT----PFPRLTYAEAMERF-GSDKPDLRYGLEL 298

Query: 192 PD 193
            D
Sbjct: 299 VD 300



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 40/134 (29%), Gaps = 5/134 (3%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           W+ +    L+E  E     +        P  E              K ++L     E   
Sbjct: 429 WAWVIDFPLVEWNEEEQRWDAVHHPFTAPKDEDLHLMDTDPGRVRAKAYDLILNGYEAGG 488

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
               +     Q+  F+    +++             L       P   GIA G DR+ M+
Sbjct: 489 GSIRIHRRDVQQRLFDLLGIDRET----AMRQFGHMLEAFEYGAPPHGGIAPGIDRICMI 544

Query: 333 VTGANNINEVIWTP 346
           +     I EV+  P
Sbjct: 545 LADEVTIREVMAFP 558


>gi|114776360|ref|ZP_01451405.1| aspartyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114553190|gb|EAU55588.1| aspartyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 594

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 69/195 (35%), Gaps = 9/195 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + + F+  R+ +  + R Y     F+EI++  L   +P     ++            
Sbjct: 133 RRPKMQGFMALRHRVTHAARNYLDSQSFLEIETPILNKSTPEGARDYLVPSRVYPGSFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S ++
Sbjct: 193 LPQ------SPQIFKQLLMVAGMDRYYQIARCFRDEDLRADRQPEFTQVDIELSFVSQDE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R   +                    +   +     R+  ++     +   +
Sbjct: 247 VMAVAEGLLRSMFDAGVGIHLPETFPRITYADAMDRYGLDRPDVRF-GLEHVNITEMMKR 305

Query: 192 PDRHLLYLQAQQAGI 206
            +  +    A   G+
Sbjct: 306 VEFKVFREPADNGGL 320



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L        G+  A D  +  +    +                   P  E         
Sbjct: 411 NLRVKVGHDMGLVAAGDHRFVWVVDFPMFAWNADEKRPEALHHPFTAPYAEDLDKLESDP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               ++ ++L     E+      + +P  Q   F+           E        +  L 
Sbjct: 471 LNMRSQAYDLVWNGTEIGGGSIRIHNPEVQARVFKTLGIS----DEEADSKFGFLVNALK 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A G DR++ L+ G ++I +VI  P +Q   +
Sbjct: 527 YGAPPHGGLAFGLDRVLSLMAGVDSIRDVIAFPKTQKAAD 566


>gi|319944729|ref|ZP_08018993.1| aspartate--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319741978|gb|EFV94401.1| aspartate--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 609

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 74/202 (36%), Gaps = 19/202 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +  ++R Y  +  F+++++  L   +P     ++            
Sbjct: 132 RRPAMQKNLMLRHRVTMAVRRYLDDLGFVDVETPMLTRSTPEGARDYLVPSRVHDGYFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  S E+
Sbjct: 192 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLSEEE 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +IR   +           +N +       ++ AEA   Y +   DL   L   
Sbjct: 246 IRGIFEPMIRTIFKQV---------MNVDLPDPFPTMSFAEAMRLYGSDKPDLRVKLQFT 296

Query: 190 DQPDRHLLYLQAQQAGIRVAHD 211
           +  D          +G   A D
Sbjct: 297 ELTDVMKTVDFKVFSGPANAKD 318



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 55/191 (28%), Gaps = 8/191 (4%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLL--YLQAQQAGIRVAHDDTWSDIFSRILI 223
           E     +    +   D    +++     R  +      +  G+          +    + 
Sbjct: 385 ERTGAQDGDIIFFGADRAKVVNDAIGALRVKIGHSEFGKGHGL-FEAGWQPLWVLDFPMF 443

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E              P                 K ++L     E+      +     
Sbjct: 444 EYDEDEKRWVALHHPFTSPKDGHEDLLESDPGACIAKAYDLVLNGWEMGGGSVRIHRDDV 503

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q   F    +       E        L+ L    P   G+A G DR+V L+TGA +I +V
Sbjct: 504 QSKVF----RALAIGPEEAEAKFGFLLSSLRYGAPPHGGLAFGLDRMVTLMTGAESIRDV 559

Query: 343 IWTPFSQSNQE 353
           I  P +Q  Q+
Sbjct: 560 IAFPKTQRAQD 570


>gi|260779181|ref|ZP_05888073.1| aspartyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605345|gb|EEX31640.1| aspartyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 592

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 70/206 (33%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R            +Q +      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRATTEKMVRDM----------WQELLNVDLGQFPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 8/146 (5%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  ++ W+ ++        E + G ++        P   +A           +  +
Sbjct: 415 KDLELTDENAWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVNAEELKANPAAANSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACLT-EMPQSS 320
           ++     E+      + +   Q   F+        I  E   +   FL   L    P  +
Sbjct: 475 DMVINGYEVGGGSVRIHNAEMQAAVFDIL-----GIDAEEQQLKFGFLLDALKFGTPPHA 529

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DRLVML+ G  NI +VI  P
Sbjct: 530 GLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|57339604|gb|AAW49789.1| hypothetical protein FTT0007 [synthetic construct]
          Length = 627

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+     +R +   N F++I++  L   +P      R +       +  
Sbjct: 159 RRPEMQHKLITRSKAIRYVRNFLDNNGFLDIETPFLTKATPEG---ARDYLVPSRNFNG- 214

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 215 --KFYALPQSPQLFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIEASFIDEAF 272

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  + +T A+A  +Y +      +     
Sbjct: 273 IMSTMERMIAGLFKETIG---------VEFATPFQVMTFADAIDKYGSDKPDLRIPLEFV 323

Query: 192 PDRHLLYLQAQQ 203
             +  +  +  +
Sbjct: 324 NIKEDMQNEEFK 335



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 10/141 (7%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRF--TKRFELYACNIE 270
             ++ + +         +       +P      S++ ++   +P    ++ +++     E
Sbjct: 453 KDWAPLWVVDFPMFEKDDNRLYAMHHPFTAPKVSSVEDLVNTNPEELSSRAYDMVINGYE 512

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
           +      +     Q   F           +E        L  L    P   GIA G DRL
Sbjct: 513 VGGGSIRIHKQDIQAKVF----NLLGISDDEAREKFGFMLDALSYGTPIHGGIAFGIDRL 568

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TG  NI +VI  P +Q+
Sbjct: 569 IMLLTGTTNIRDVIAFPKTQT 589


>gi|194336680|ref|YP_002018474.1| aspartyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693359|sp|B4SAH1|SYD_PELPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194309157|gb|ACF43857.1| aspartyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 601

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 67/209 (32%), Gaps = 32/209 (15%)

Query: 2   HQIP----SQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           H +P     +   + +   + R            ++ R+ + +++R Y  E  FIEI + 
Sbjct: 120 HPLPFPVADEVVTSEELRLKYRFIDLRREKIHENIIFRSRLTAAIRRYLEEQDFIEIQTP 179

Query: 48  SLQ-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
            L   SP      R F     +        Y L  +P+   + L+ +G  + F  A  +R
Sbjct: 180 ILTSSSPEG---ARDFLVPSRLH---PGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFR 233

Query: 106 NGEQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
           + +      P EF  L+   A      L      +I       + K  +           
Sbjct: 234 DEDARADRSPGEFYQLDMEMAFIEQNDLFTILEGMIEHLTRTMSHKRITQ--------FP 285

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPD 193
              I+  E   R+   D        +  D
Sbjct: 286 FPRISYKEVMNRF-GTDKPDLRIPLEISD 313



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 50/149 (33%), Gaps = 11/149 (7%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
             + ++  I    + E  E    I+        P  E       P       ++++    
Sbjct: 434 KDELSFCWIVDFPMYEYNEEAKKIDFSHNPFSMPQGEMEALETMPPLDILAYQYDIVCNG 493

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAM 324
           IEL +       P      F      ++        +D  F   +       P   GIA 
Sbjct: 494 IELSSGAIRNHKPEIMYKAFGIAGYSRE-------EVDARFGHMIEAFKLGAPPHGGIAP 546

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G DRLVM++    NI EVI  P +Q  Q+
Sbjct: 547 GLDRLVMILCDEQNIREVIAFPMNQQAQD 575


>gi|317507127|ref|ZP_07964887.1| aspartyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254573|gb|EFV13883.1| aspartyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 599

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 78/210 (37%), Gaps = 29/210 (13%)

Query: 3   QIP---SQPWWNRDF-HYR----RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P    +P       HYR    RRP     L  R+ + ++ R+  ++  FIE+++ +L 
Sbjct: 105 PLPFPLDEPSGEETRFHYRYLDLRRPEAAQILRLRSTVNAAARQTLLDQGFIEVETPTLT 164

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             +P      R F     +         L  SP+   + L+  G E+ F  A  +R+ + 
Sbjct: 165 RSTPEG---ARDFIVPARL--KPGNWYALPQSPQLFKQLLMVGGVERYFQLARCYRDEDF 219

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
               QPEFT L+   +  + + ++    +++     +  ++          P      IT
Sbjct: 220 RADRQPEFTQLDLEMSFVTQDDVIALAEDVVAAVWGLLGEE----------PQLPLPRIT 269

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
             EA  RY   D        +  D    + 
Sbjct: 270 YEEAMRRY-GSDKPDLRFGVELVDCTEYFK 298



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 9/108 (8%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P  ES            ++ ++L     E+      +     Q          K   ++E
Sbjct: 454 PTEESLATLEADPGSALSQAYDLVCNGHEIGGGSIRIHRREVQERVL------KLMGFDE 507

Query: 302 --TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                     L       P   G+A G+DR+  L+ G ++I EVI  P
Sbjct: 508 DRAQAAFGFLLDAFAYGAPPHGGMAFGWDRITALLAGVDSIREVIAFP 555


>gi|149926629|ref|ZP_01914889.1| aspartyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824558|gb|EDM83774.1| aspartyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 601

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 72/205 (35%), Gaps = 21/205 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R  +  ++R +     F++I++  L   +P     ++            
Sbjct: 133 RRPQMQKNLMLRYKVAMAIRNHLDAQGFVDIETPMLTKSTPEGARDYLVPSRVHAGEFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 193 LPQ------SPQLFKQMLMVAGYDRYYQITKCFRDEDLRADRQPEFTQVDIETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR             Q ++    +    +  +EA AR+         D   +
Sbjct: 247 IRDLFEDMIRKVF---------KQTMDVELQNPFPVMPYSEAMARFG----SDKPDLRVK 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSD 216
            +   L    +    +V       D
Sbjct: 294 MEFTELTDIMKDVDFKVFSGPANMD 318



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 44/146 (30%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           Q+AG+     +    +    + E  E       C      P                 K 
Sbjct: 424 QKAGLVQGKWEPLW-VIDFPMFELDEEAGRWVACHHPFTSPKDGHEDYLTTDPGKCIAKA 482

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   F            E        L  L    P   
Sbjct: 483 YDMVLNGWELGGGSVRIHKEKVQSKVFRALNIS----EEEAAAKFGFLLDALQYGAPPHG 538

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR+V +++GA +I +VI  P
Sbjct: 539 GLAFGLDRIVTMMSGAESIRDVIAFP 564


>gi|56750249|ref|YP_170950.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|62287522|sp|Q5N5I8|SYD_SYNP6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56685208|dbj|BAD78430.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 599

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 66/183 (36%), Gaps = 19/183 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
              R    L  R+ +  ++R +   E QFIEI++  L   +P     ++           
Sbjct: 136 RRDRMNRNLQLRHQVVKAIRRFLEDEEQFIEIETPVLTKSTPEGARDYLVPSRVNP---- 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
              +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E
Sbjct: 192 --GEWFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFLSQE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++     +I    +                      +T AEA  RY   D   T     
Sbjct: 250 EIIDLNERLIAHIFKTVKG---------IELPRPFPRLTYAEAMDRY-GSDRPDTRFGLK 299

Query: 191 QPD 193
             D
Sbjct: 300 LVD 302



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 49/149 (32%), Gaps = 15/149 (10%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G  +   D  +     ++   +              +P       ++        + ++
Sbjct: 422 LGKELGLIDPEALNLLWVVDFPMVEWNADEKRYEALHHPFTAPNPQDLEDLTTARAQAYD 481

Query: 264 LYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMP 317
           +    +E+      +     Q   FE      +E Q K     E +    DF       P
Sbjct: 482 IVLNGLEIGGGSLRIYQRDIQERVFETIGLSHEEAQAKFGFLLEAF----DF-----GTP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              GIA G DRLVML+TG  +I + I  P
Sbjct: 533 PHGGIAYGLDRLVMLLTGEESIRDAIAFP 561


>gi|29376492|ref|NP_815646.1| aspartyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227519312|ref|ZP_03949361.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|257419651|ref|ZP_05596645.1| aspartyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|46577229|sp|Q833I2|SYD_ENTFA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29343956|gb|AAO81716.1| aspartyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227073241|gb|EEI11204.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|257161479|gb|EEU91439.1| aspartyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|315574559|gb|EFU86750.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315581799|gb|EFU93990.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 589

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 22/188 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP     +  R+ +  ++R Y   + F++I++  L + +P     ++            
Sbjct: 135 RRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQIDIETTFLTPEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     N++    +       S              ++  EA ARY   D   T    + 
Sbjct: 249 IQTYTENMLAEVMKETKGIEIS---------VPFPRMSYDEAMARY-GSDKPDTRFAMEL 298

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 299 IDVAEVVK 306



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 46/146 (31%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    L E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   FE     K+    E        L  L    P   
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKE----EAQDQFGFLLDALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DRL ML+ G  NI EVI  P
Sbjct: 531 GIALGLDRLAMLLAGEENIREVIAFP 556


>gi|323142309|ref|ZP_08077141.1| aspartate--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413193|gb|EFY04080.1| aspartate--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 598

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 75/206 (36%), Gaps = 8/206 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +   +R+Y  +N F+EI++  L + +P     ++            
Sbjct: 137 RRPEMQRNLILRHKVAKLMRDYLDDNHFLEIETPMLCKSTPEGARDYLVPSRVNPGKFYA 196

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ F  A  +R+ +     QPEFT L+   +    ++
Sbjct: 197 LPQ------SPQIFKQLLMVAGMERYFQIARCFRDEDLRADRQPEFTQLDMEMSFMEVDE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +I    + A  K               +     +   R+       +      
Sbjct: 251 ILELMEGLIHHIFKGALGKDIQIPFQRLTWDDAMDRFGSDKPDLRFGMELKNVSEAVQGC 310

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +    + A    ++  +   ++DI
Sbjct: 311 TFQVFNNVIANGGQVKCINVKGYADI 336



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 52/160 (32%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       ++ +    + E  E              P  E     +   
Sbjct: 411 ALRIEMAKRRGLIDPDKLAFTWVVDFPMFEYNEEEKRYVAMHHPFTAPRDEDLPLLLTNP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
              + K +++     E+      +     Q+  FE           E        +    
Sbjct: 471 GKVYAKAYDMVLNGTEIGGGSIRIHRRDVQKKVFEAIGLS----DEEAQEKFGFMMNAFE 526

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A G DRL+M++   ++I +VI  P +QS  +
Sbjct: 527 YGAPPHGGLAFGLDRLIMIMAQRDSIRDVIAFPKTQSASD 566


>gi|282908772|ref|ZP_06316590.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282327036|gb|EFB57331.1| asparaginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
          Length = 259

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 77/282 (27%), Gaps = 34/282 (12%)

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +  +  +L  S +   +    A   K+F F   +R  +     H  EF M+E   A  ++
Sbjct: 2   YFDQDAFLSQSGQLYLEAAAMAH-GKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNH 60

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            + ++     +    +   +                      +   +    D        
Sbjct: 61  AESLEIQEQYVTHVVKSVLENC--------------------KLELKMLERDTSKLEKVA 100

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SAL 248
               R       +        D  W + F       I  +   +    +  YP       
Sbjct: 101 TPFPRISYDDAIEFLKAEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNYPTKIKPFY 158

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIYNETYPID 306
               P +       +L A          E++   E+    E  ++  ++  +  E Y   
Sbjct: 159 MQPNPENEETVLCADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGLDEEAYSYY 213

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            D            G  +G +R V  ++G  ++ E    P  
Sbjct: 214 LDLRR--YGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRL 253


>gi|109899255|ref|YP_662510.1| aspartyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123170932|sp|Q15RN2|SYD_PSEA6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|109701536|gb|ABG41456.1| aspartyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 592

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 74/206 (35%), Gaps = 23/206 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     L  R  + S++R Y   + F++I++  L   +P     ++    T       
Sbjct: 130 RRPVMSDRLKFRAKVTSAVRSYLEGDGFLDIETPMLTKATPEGARDYLVPSRTHKGKFFA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++        EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQPEFTQIDIETTFLGAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +MK    +IR               +      E   +T A+A  R+   D     +  + 
Sbjct: 244 VMKITEGMIRNLFMK----------MLNVDLGEFPQMTYADAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        +D    +
Sbjct: 293 VDVADILKDVEFKVFSGPANDAKGRV 318



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 50/160 (31%), Gaps = 18/160 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYP 253
             L     + G  +   +        I     E   G           P   +A      
Sbjct: 404 EALGALRLKVGEDLDLLEGEWKPLWVIDFPMFEEFDGQFYALHHPFTAPRDMTAEQLAAD 463

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDE 307
                +  +++     EL      + +   Q   F      E+E + K            
Sbjct: 464 PANALSNAYDMVLNGCELGGGSVRIHNQDMQAKVFNILGISEEEAEVKFG---------- 513

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L  L    P  +G+A G DRLVML+TGA +I +V+  P
Sbjct: 514 FLLDALKFGAPPHAGLAFGLDRLVMLMTGATSIRDVMAFP 553


>gi|294101541|ref|YP_003553399.1| aspartyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616521|gb|ADE56675.1| aspartyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 602

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 5/159 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    L E+ E              P  E         
Sbjct: 419 QLRLDLAKEHNLMDRDKWEFLWVVHFPLFERDEEENRWVAVHHPFTSPVIEDLPFLDSEP 478

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
               ++ ++      E+      + DP  Q   F+     ++    E        L  L+
Sbjct: 479 QKVRSRAYDCVLNGNEIGGGSIRIHDPEIQEKVFQCLAFSRE----EARKRFGFLLDALS 534

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              P   GIA G DRLVML+ GA++I +V+  P +Q  Q
Sbjct: 535 SGTPPHGGIAFGVDRLVMLLCGASSIRDVMAFPKTQKAQ 573



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 66/218 (30%), Gaps = 9/218 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  RN I    R++     F++I++  L   +P     ++            
Sbjct: 145 RRDKMQRNLRIRNQIIRFTRDFLARYDFVDIETPMLTKSTPEGARDYLVPSRVNPGTFYA 204

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E 
Sbjct: 205 LPQ------SPQIFKQILMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDMEMSFITEED 258

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +       +        Q          + +   +     +   R    ++        +
Sbjct: 259 IYALVEEFMAGLFREIAQVDIPTPFRKMDYWEAMDRFGSDKPDLRIP-FEIHDVAYIFKE 317

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
            D         + G             SR  +  +E  
Sbjct: 318 SDFAPFKDLLAKGGYVRGLPLPGGASLSRKEVSLVEEK 355


>gi|332366171|gb|EGJ43927.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 578

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 47/131 (35%), Gaps = 7/131 (5%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
           F  ++   +              +P  +    +    D   +  +++     E+      
Sbjct: 423 FLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFEDEQEPDQFRSHAYDIVLNGYEIGGGSLR 482

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           + D   Q   FE        +  E Y  D   FL  L    P   G+A+G DRLVM++ G
Sbjct: 483 IHDRKAQEAMFE-----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAG 537

Query: 336 ANNINEVIWTP 346
             NI +VI  P
Sbjct: 538 EENIRQVIAFP 548



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 87/278 (31%), Gaps = 27/278 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPCLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKAVVKKTHGLELTED---------FPTISYEEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
               L        I+ A D+        ++   +           L  +           
Sbjct: 296 SLTDLCQSNDSLLIKKALDN-----QEEVMGICVPDAASAFSKKQLSHHYQEMKEFGC-S 349

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +  +L            E  D      RFE 
Sbjct: 350 RFASLKVENGQLV--GDLASTFEAESQD---LLARFEA 382


>gi|254468835|ref|ZP_05082241.1| aspartyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087645|gb|EDZ64928.1| aspartyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 595

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 42/153 (27%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L         I    + +   +    + E  E     +        P            
Sbjct: 411 ALREKIGHDRKILSGDEWSILWVVDFPMFEFNEDEDRWDALHHPFTSPKDGHEKLLSSDP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               +K ++L     E+      + D   Q   F            E        L  L 
Sbjct: 471 GACLSKAYDLVINGWEVGGGSIRIHDQSVQSQVFSALNIS----NEEANEKFGFLLEALQ 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DRL  L+ GA +I +VI  P
Sbjct: 527 YGAPPHGGLAFGLDRLTTLLVGAESIRDVIAFP 559



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 70/188 (37%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  I  S+R+   E+ FIEI++  L   +P     ++            
Sbjct: 131 RRDQMQKNLKVRYEITKSVRQSLDEDNFIEIETPILTRSTPEGARDYLVPSRVHHGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +      
Sbjct: 191 LPQ------SPQLFKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDIEASFV---- 240

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                   ++  A    QK+F    +N +   + + IT  EA  RY +      ++    
Sbjct: 241 ----EEEDVKNIAAKLTQKVFK-DVLNVDLPEKFQEITYKEAMTRYGSDKPDLRVNLELI 295

Query: 192 PDRHLLYL 199
                +  
Sbjct: 296 ELTEDMKD 303


>gi|221218187|ref|ZP_03589653.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225549503|ref|ZP_03770469.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|221192135|gb|EEE18356.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|225369780|gb|EEG99227.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 586

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E     +    +   P  +         
Sbjct: 405 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +EL +    + +   Q+  F     +K+K+ +        FL  L 
Sbjct: 465 KKTIGEIYDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLED----RFGFFLKALE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 521 YGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 99/299 (33%), Gaps = 17/299 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + ++ +F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEG---ARDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +                +   R+       + +  + 
Sbjct: 245 IFKLIENMLFLIFKNCININLPKKFKKITYKKSMNKYGSDKPDTRFELELQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                      +  I++      +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 305 EFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY-FTKIENNKFSG 363

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             A    T+  EL        N        +  E   +   +++ K         IDE+
Sbjct: 364 GIAKFLKTEEQELIKTYSLENNDIIFFTANNNWETACKAMGQIRIKIANDL--GLIDEN 420


>gi|313820478|gb|EFS58192.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313822716|gb|EFS60430.1| aspartyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
          Length = 609

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L+ R+ +  ++RE    + F +I++ +L   +P      R F     +    
Sbjct: 132 RRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEG---ARDFLVPARL--AP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +      +    ++             +  +    IT  EA  RY +        N    
Sbjct: 247 IALAEETMAACWKIIG----------VDMPTPLPRITWHEAMDRYGSDKPDLRFGNEITE 296

Query: 193 DRHLLYLQA 201
                   A
Sbjct: 297 VTDFFANTA 305



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       ++      E+      +     Q   F          
Sbjct: 454 FTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGI----G 509

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G   I +VI  P
Sbjct: 510 PEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFP 558


>gi|299135514|ref|ZP_07028698.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298601638|gb|EFI57792.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 618

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 69/186 (37%), Gaps = 9/186 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+ +  ++R + VE  F+EI++  +   +P     ++            
Sbjct: 142 RRVEMQKNFAVRSRVAMAIRNFLVEQGFLEIETPFMTRSTPEGARDYLVPSRVHPGHFYA 201

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K F  A  +R+ +     QPEFT ++        E 
Sbjct: 202 LPQ------SPQIFKQILMISGFDKYFQIARCFRDEDLRADRQPEFTQIDLEMTFPRQET 255

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY-ANIDLGTTLDNPD 190
           + +     ++ A + A  ++ + Q V            + +   R  A +DL   L    
Sbjct: 256 IFRVVEGFLQTAFKAAGIELGNQQFVQMTYDQAIARYGIDKPDMRLPAMVDLSAELTAEL 315

Query: 191 QPDRHL 196
           +    +
Sbjct: 316 RETLKV 321



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 57/188 (30%), Gaps = 15/188 (7%)

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV----AHDDTWSDIFSRILI 223
           IT         N D              L    A + G+      A D  +  +    + 
Sbjct: 405 ITPKPGTPAKWNHDPQWIWKRVGALRLELAKKYADKHGLFTQTGTAADFKFLWVTDFPMY 464

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPR--FTKRFELYACNIELCNACDELLDP 281
           E  E     +        P  +   +     D        +++     EL +    +   
Sbjct: 465 EWNEEAKTWDAAHHPFTSPHEDDITSGRLVNDKGAVRALAYDIVLNGTELGSGSIRIHRQ 524

Query: 282 IEQRHRFEKEMQEKKKI--YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
             Q   F      +       E       FL  L    P   GIA+G DR+VM++ GA++
Sbjct: 525 DVQAEIF------RSLGMTDEEAKARFGFFLDALEYGTPPHGGIALGLDRIVMILAGASS 578

Query: 339 INEVIWTP 346
           + EVI  P
Sbjct: 579 LREVIAFP 586


>gi|257867152|ref|ZP_05646805.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257873487|ref|ZP_05653140.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257801208|gb|EEV30138.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257807651|gb|EEV36473.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 591

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 46/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     ++ G+       +  +      E  E              P            
Sbjct: 408 AIRNKLGKELGLIDESKFNFLWVTDWPQFEYDEEAGRYVSAHHPFTLPKESDLPMLTTDP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
              + + +++     EL      +     Q   FE     ++    E        L  L 
Sbjct: 468 SKVYAQAYDIVLNGYELGGGSLRIHTREVQEQMFEALGFSRR----EMQNQFGFLLDALD 523

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+ G  NI EVI  P
Sbjct: 524 YGFPPHGGIALGLDRLVMLLAGEENIREVIAFP 556



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 65/188 (34%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              +    ++ R     ++R +   N F++I++  L + +P     ++            
Sbjct: 135 RRPKMTNNIVMRAKTTQAIRNFLDTNDFLDIETPYLGKSTPEGARDYLVPSRIYPGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETSFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++            +              +T  EA  RY   D   T  + + 
Sbjct: 249 IQTYTEELLAKVMREVKGIEVT---------LPFPRMTYDEAMGRY-GSDKPDTRFDMEL 298

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 299 IDLSEVVK 306


>gi|258566275|ref|XP_002583882.1| hypothetical protein UREG_06849 [Uncinocarpus reesii 1704]
 gi|237907583|gb|EEP81984.1| hypothetical protein UREG_06849 [Uncinocarpus reesii 1704]
          Length = 392

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/340 (12%), Positives = 95/340 (27%), Gaps = 37/340 (10%)

Query: 44  IDSMSLQYS-PGNE-----THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKI 97
           +    +  S             R  + +    ++ R P YL  S +   +   AA    +
Sbjct: 47  VQPPLITSSDCEGAGQVFKVSPREIAAQEEQIEYFRSPKYLTVSSQLHLEAY-AAELGNV 105

Query: 98  FCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNI-IRCAAEVANQKIFSFQ 155
           +  +  +R  +     H  EF MLE           +   +   IR   +  ++   + +
Sbjct: 106 WTLSPTFRAEKSDTPRHLSEFYMLEAELNFVDDLDKLTSFVEFFIRKLTQRLHESTVAHE 165

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ----QAGIRVAHD 211
            +N     +  +    +   R+ ++   ++       +       A     +   +    
Sbjct: 166 LLNPKRTGQTGHAEDVDLVQRWKSLMSPSSWPQIHYTEAMSWLQDAPSKRGKLKAKFNSS 225

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-------YPADPRFTKRFEL 264
            TW         + +   +G      +  YP                          F+L
Sbjct: 226 PTWDTGIQLEHEKYLVNAVGNGLPIFITDYPKHLKPFYMPPSTGSSADDPRKETVACFDL 285

Query: 265 YACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE---TYPIDEDFLACLT------- 314
               +            +EQ  R  +E    +   +E   +  +   +L           
Sbjct: 286 ILPEVCEVVGGSLREHRLEQLLRNMRERGMLQGRADETPASPEMTYPYLEPNEDLGTLQW 345

Query: 315 -------EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                        G  +GFDRL+  + G  ++ +V+  P 
Sbjct: 346 YADLRRWGSAPHGGFGLGFDRLLSYLAGVPSVRDVVPFPR 385


>gi|183221477|ref|YP_001839473.1| aspartyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911564|ref|YP_001963119.1| aspartyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|238687780|sp|B0SB35|SYD_LEPBA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238687852|sp|B0SSV7|SYD_LEPBP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167776240|gb|ABZ94541.1| Aspartate--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779899|gb|ABZ98197.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase; AspRS)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 601

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 8/168 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L+ R+ +  +LREY     F+EI++  L   +P      R F     +    
Sbjct: 142 RREELRDRLVLRHKLTFALREYLDSKSFLEIETPILNKSTPEG---ARDFLVPSRLNAG- 197

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G E+ F     +R+ +     QPEFT L+   +  + E 
Sbjct: 198 --EFYALPQSPQLFKQILMIGGMERYFQIVKCFRDEDLRADRQPEFTQLDMEFSFVTEED 255

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           + ++   +   A +   Q   +   +        E     +   R+  
Sbjct: 256 IRREIEAMWAFALKKVFQLEVNAPFMTMPYHVAMEEYGSDKPDIRFGM 303



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 55/191 (28%), Gaps = 24/191 (12%)

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +   E    +   D    ++      R  L  +     +  +       +    + E  E
Sbjct: 392 VGSKEGDMVFFGADSSKIVNASLGALRLKLSEKYDPPKVPYSFHW----VVDFPMFEIDE 447

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTK-------RFELYACNIELCNACDELLD 280
                         P  E         D +           ++L     E+      + +
Sbjct: 448 TTKSWTFLHHPFTSPKEEDFQKLRDWKDGKEVDLSSIGAKAYDLVLNGTEIGGGSIRIHN 507

Query: 281 PIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           P  Q    E     E   K K            L  L+   P   GIA G DR++ML+TG
Sbjct: 508 PEIQSLVLEAIGIGEEDAKSKFG--------FLLDALSFGAPPHGGIAFGVDRIMMLLTG 559

Query: 336 ANNINEVIWTP 346
             +I +VI  P
Sbjct: 560 GTSIRDVIAFP 570


>gi|312148395|gb|ADQ31054.1| aspartyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 586

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E     +    +   P  +         
Sbjct: 405 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +EL +    + +   Q+  F     +K+K+ +        FL  L 
Sbjct: 465 KKTIGEIYDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLED----RFGFFLKALE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 521 YGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 76/217 (35%), Gaps = 12/217 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + ++ +F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEG---ARDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +                +   R+       + +  + 
Sbjct: 245 IFKLIENMLFLIFKNCININLPKKFKKITYKKAMNKYGSDKPDTRFELELQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                      +  I++      +D FSR  I  +E 
Sbjct: 305 EFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEE 341


>gi|218961818|ref|YP_001741593.1| aspartyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167730475|emb|CAO81387.1| aspartyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 593

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 53/156 (33%), Gaps = 19/156 (12%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP--ESALANIYPADPR 257
            A Q  +   +   +  I    L  K            +   P       L         
Sbjct: 418 LAPQLNLIPENSFAFCWITDFPLFTKNLETGKWEPAHHMFTLPKEEHIPYLDIPEKIGEI 477

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLA 311
             + ++L    +EL +          Q+  F      E+E+Q++             FL 
Sbjct: 478 IGQLYDLVCNGVELSSGSIRCHRYDIQKKIFDILGFSEEELQKRFG----------FFLE 527

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   GIA G DRLVM++TGA +I +VI  P
Sbjct: 528 ALKYGTPPHGGIAPGLDRLVMIMTGAESIRDVIAFP 563



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 59/168 (35%), Gaps = 8/168 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + +  ++ R+ I   +RE+     F EI++  L + +P     ++     +      
Sbjct: 140 RRPKLQKIIITRHRIMQIIREFLNNEGFYEIETPILMKSTPEGARDYLVPSRMQPGKFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   +  S  Q
Sbjct: 200 LPQ------SPQMFKQLLMIAGLDRYYQIARCFRDEDLRADRQPEFTQLDIELSFVSQAQ 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +      +     +       S            E     +   R+  
Sbjct: 254 IFDLIERLFAKLFQEVLGYNLSVPFPVIPYAEAMENYGCDKPDIRFEM 301


>gi|224532521|ref|ZP_03673146.1| aspartate--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512593|gb|EEF82969.1| aspartate--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 586

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E     +    +   P  +         
Sbjct: 405 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +EL +    + +   Q+  F     +K+K+ +        FL  L 
Sbjct: 465 KKTIGEIYDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLED----RFGFFLKALE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 521 YGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 99/299 (33%), Gaps = 17/299 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + ++ +F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGA---RDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +                +   R+       + +  + 
Sbjct: 245 IFKLIENMLFLIFKNCININLPKKFKKITYKKAMNKYGSDKPDTRFELELQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                      +  I++      +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 305 EFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY-FTKIENNKFSG 363

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             A    T+  EL        N        +  E   +   +++ K         IDE+
Sbjct: 364 GIAKFLKTEEQELIKTYSLENNDIIFFTANNNWETACKAMGQIRIKIANDL--GLIDEN 420


>gi|302380375|ref|ZP_07268845.1| aspartate--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|303233682|ref|ZP_07320336.1| aspartate--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302311865|gb|EFK93876.1| aspartate--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302495116|gb|EFL54868.1| aspartate--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 588

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 57/160 (35%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  I    L E  E              P  E     +   
Sbjct: 411 ALRNKIARDMNLVDNDTFEFVWIVDFPLFEYDEEENRFVAMHHPFTMPKEEDIQYLLTDK 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +    K +++     E+      + +   Q+  FE  ++  +++    +     F+    
Sbjct: 471 EKVRAKAYDIVCNGDEIGGGSIRINNSDLQKKMFEA-LELTEEMIENKFG---FFVEAFN 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A G DRL+ML+ G +NI +VI  P +QS  +
Sbjct: 527 YGTPPHGGLAYGMDRLMMLLVGTDNIKDVIAFPKTQSATD 566



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 74/217 (34%), Gaps = 8/217 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + +  L  R      +REY  EN F EI++  L + +P     ++ A          
Sbjct: 137 RKPKLQNNLKLRAKTNKLIREYLDENGFYEIETPFLGKPTPEGARDYLVASRVNEHSFYA 196

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    E 
Sbjct: 197 LPQ------SPQLMKQLLMISGMDRYYQIVKCFRDEDLRANRQPEFTQVDMEMSFVDQED 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I+   +                    E     +   R+       T    D 
Sbjct: 251 VMTINEGLIKKLFKEIRGIDIPTPIKRMTYSEAMERYGCDKPDLRFGFELKNITELVKDS 310

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             +       +   +R  +   +   +SR  I+K+E 
Sbjct: 311 EFKVFSSCNEKNKSVRCINIGNYESEYSRKKIDKLEK 347


>gi|262340803|ref|YP_003283658.1| aspartate-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272140|gb|ACY40048.1| aspartate-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 567

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 83/223 (37%), Gaps = 11/223 (4%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R +  +N F+EI++  L  Y+P      R+F         +
Sbjct: 127 RRNPIKNNLIIRHNLALEIRNFLSQNGFLEIETPVLINYTPEG---ARSFVVPSRTH--V 181

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+  G +K F     +R+ +     Q EFT ++   +    + +
Sbjct: 182 GKFYALAQSPQLFKQLLMIGGIDKYFQIVKCFRDEDARSDRQIEFTQIDCEMSFVEVDDV 241

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    N I+        K    ++  C  +S+   +   ++      +      +   + 
Sbjct: 242 LIFFENFIKHLFRRI--KNIQLESFPCISYSDAMKMYGTDSPDIRFGMPFIELNNLVQKK 299

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
           +   L  Q    GI+V       D  + +  +   PN+     
Sbjct: 300 NISFLKEQELIIGIKVPKCHKNHDQMNSLFKKIENPNIFWIQY 342



 Score = 73.1 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A    ++ +       +    L+E  E +            P  E         
Sbjct: 392 KVRLEIANHLNLKNSKIFKPLWVTDLPLLEWDERSKRYKSVHHPFTSPKKEDIHLLEKYP 451

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE---DFLA 311
           +   ++ ++L    IE+ +    + +   Q   F+        +      I+     F+ 
Sbjct: 452 ENIRSQSYDLIINGIEIGSGSIRIHNQNIQNLIFKH-------LGLSAKEIESEFGFFIK 504

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 P   GIA G DRL+ L+ G ++I   I  P
Sbjct: 505 SFEYGTPPHGGIAFGLDRLINLLEGNDDIKNFIAFP 540


>gi|216264214|ref|ZP_03436206.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|225548601|ref|ZP_03769648.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|215980687|gb|EEC21494.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|225370631|gb|EEH00067.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 586

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E     +    +   P  +         
Sbjct: 405 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +EL +    + +   Q+  F     +K+K+ +        FL  L 
Sbjct: 465 KKTIGEIYDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLED----RFGFFLKALE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 521 YGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 99/299 (33%), Gaps = 17/299 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + ++ +F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGA---RDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +                +   R+       + +  + 
Sbjct: 245 IFKLIENMLFLIFKNCININLPKKFKKITYKKAMNKYGSDKPDTRFELELQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                      +  I++      +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 305 EFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY-FTKIENNKFSG 363

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             A    T+  +L        N        +  E   +   +++ K         IDE+
Sbjct: 364 GIAKFLKTEEQKLMKTYSLENNDIIFFTANNNWETACKAMGQIRIKIANDL--GLIDEN 420


>gi|92113967|ref|YP_573895.1| aspartyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|122990497|sp|Q1QWG2|SYD_CHRSD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91797057|gb|ABE59196.1| aspartyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 592

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 19/188 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                   L  R+ I  S+R Y     F++I++  L   +P     ++    T       
Sbjct: 132 RRPEMIDKLRLRSRITHSVRAYLEGQGFLDIETPILTRATPEGARDYLVPSRTHAGEFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +      
Sbjct: 192 LPQ------SPQLFKQLLMVSGFDRYYQIAKCFRDEDLRADRQPEFTQIDLEASFVEESD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    ++IR   +                      +  +EA  RY   D        + 
Sbjct: 246 IMSLTEDMIRRLFQDVLD----------VELPAFPKMPYSEAMNRY-GSDKPDLRIPLEL 294

Query: 192 PDRHLLYL 199
            D   L  
Sbjct: 295 VDVDDLMQ 302



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 44/116 (37%), Gaps = 6/116 (5%)

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
                 P+         PA+   ++ +++     EL      + D   QR  FE      
Sbjct: 448 HHPFTAPSCTPEAFKADPANA-LSRAYDMVLNGTELGGGSIRIHDQTMQRAVFEVLGI-- 504

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                E        L  L    P   G+A G DRLVML++GA  I EVI  P +QS
Sbjct: 505 --GEEEADEKFGFLLDALKFGAPPHGGLAFGLDRLVMLMSGARTIREVIAFPKTQS 558


>gi|255715569|ref|XP_002554066.1| KLTH0E13530p [Lachancea thermotolerans]
 gi|238935448|emb|CAR23629.1| KLTH0E13530p [Lachancea thermotolerans]
          Length = 673

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 84/251 (33%), Gaps = 12/251 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +    + + FL KR+ I  ++RE      F+E+++  L + +P      R F 
Sbjct: 183 PPEFRYLQLRLPKYQNFLQKRHQIAQNIRELLNLQGFLEVETPVLFKSTPEG---AREFL 239

Query: 64  TELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
                +   +   Y L  SP+   + L+A+G +K + FA  +R+ +     QPEFT ++ 
Sbjct: 240 VPARNKQDGKPTFYALPQSPQQYKQLLMASGIQKYYQFARCFRDEDLRSDRQPEFTQVDL 299

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVN------CNPFSEPEYITVAEAFAR 176
             A  S +++M    + +       +                         ++   A   
Sbjct: 300 EMAFASGDKIMHVVEDTMVSTWNKFSSSEALQTVDKNGLLVAVTGSQPVSRMSYKTAMTH 359

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCC 235
           Y          +    D      + ++  +  V       + FS +           N  
Sbjct: 360 YGIDKPDLRFRDLKIVDMSEFKARGKENILFPVFEVLILRNAFSTVEEYHKNWAFLSNEH 419

Query: 236 TILDRYPAPES 246
               R P    
Sbjct: 420 NYRYRTPIVVP 430



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           + ++     +EL      + DP  Q++ F+  ++ K     E   +    L       P 
Sbjct: 572 QHYDFVLNGVELGGGSTRIHDPELQKYVFKDILKIK-----EPEKLFGHLLTAFENGTPP 626

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G+A+GFDR+V ++ G+ NI +VI  P
Sbjct: 627 HAGLAIGFDRMVAMICGSENIRDVIAFP 654


>gi|45190553|ref|NP_984807.1| AEL054Cp [Ashbya gossypii ATCC 10895]
 gi|44983495|gb|AAS52631.1| AEL054Cp [Ashbya gossypii ATCC 10895]
          Length = 477

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 92/333 (27%), Gaps = 23/333 (6%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDH-----IRK 74
            L  R+ I+++L +   +    ++    +          +  F  E              
Sbjct: 150 LLRFRSHIEATLTQILTQEGIYKVPPPVVTSGDCEGAGEL--FHVEANSLRASQRKYFGT 207

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHE-SYEQL 132
             YL  S +    +++A    +++     +R  E     H  EF MLE          QL
Sbjct: 208 NAYLTVSAQMHL-EVIALALGRVWALTPCFRAEESDTSRHLSEFWMLEAELCFVQDVTQL 266

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +I+  A    Q+                  TV   +         T        
Sbjct: 267 TGFVQKLIQELARTLLQRQDELLPGMVPQEGAESRETVLARWQSLIEHPWHTVTYT---- 322

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
              +  LQ Q       H   W         + +           +  YP    A     
Sbjct: 323 -EAIQVLQRQHDLSPFVHAPQWGAALQSEHEKWLAGAH-FGGPVFVTDYPRECKAFYMRL 380

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             D +    F+L    +       E++    +  R++  ++E          +D      
Sbjct: 381 NDDKKTFACFDLLFPEM------GEVMGGSIREERYDALLREMTSRNMNIAELDWYLQLR 434

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                   G  +G +RL+  + G +N+ + I  
Sbjct: 435 RQGSAPHGGFGLGMERLISWLYGNHNVRDAIGF 467


>gi|283954077|ref|ZP_06371602.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794356|gb|EFC33100.1| aspartyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 583

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 78/231 (33%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLASMGFLEVETPILTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 179 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++    N ++   +   ++I + F+ +      E       +     
Sbjct: 233 QIDVEMSFCEQKDVINVAENFLKDIFKACGKEIQTPFRQMRYKDAIENYGSDKPDLRFDL 292

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 293 KFIDVIDIFAKSNNEIFANIAKDIKKNRIKAIRVPKGDTIFSKRQMQRFEE 343



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EQNDDGSYSAMHHPFTMPKNIDENDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 495

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 496 KLLNIDEEQQREKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 545

Query: 342 VIWTPFSQSNQ 352
           VI  P +Q  Q
Sbjct: 546 VIAFPKTQKAQ 556


>gi|224533525|ref|ZP_03674114.1| aspartyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|224513198|gb|EEF83560.1| aspartyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
          Length = 586

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E     +    +   P  +         
Sbjct: 405 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +EL +    + +   Q+  F     +K+K+ +        FL  L 
Sbjct: 465 KKTIGEIYDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKLED----RFGFFLKALE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 521 YGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 99/299 (33%), Gaps = 17/299 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + ++ +F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGA---RDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +                +   R+       + +  + 
Sbjct: 245 IFKLIENMLFLIFKNCININLPKKFKKITYKKAMNKYGSDKPDTRFELELQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                      +  I++      +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 305 EFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY-FTKIENNKFSG 363

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             A    T+  EL        N        +  E   +   +++ K         IDE+
Sbjct: 364 GIAKFLKTEEQELIKTYSLENNDIIFFTANNNWETACKAMGQIRIKIANDL--GLIDEN 420


>gi|154249909|ref|YP_001410734.1| aspartyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769385|sp|A7HME4|SYD_FERNB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|154153845|gb|ABS61077.1| aspartyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 576

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 81/225 (36%), Gaps = 39/225 (17%)

Query: 4   IPSQPWWN---RDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
           +P     +    +   + R            L+ R+ +  + REY   N F+E+++  L 
Sbjct: 106 LPPFYPGDDVSEEMRLKYRYLDIRNPKMMNNLILRHKLAFATREYLSNNNFLEVETPYLT 165

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     ++   +   Y L  SP+   + L+ +G ++ F     +R+ +
Sbjct: 166 KSTPEG---ARDFLVPSRLK---KGNFYALPQSPQLFKQILMISGIDRYFQIVRCFRDED 219

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                QPEFT ++   +    E ++    N+IR   +                  + + I
Sbjct: 220 LRADRQPEFTQIDIEMSFVHMEDVINLAENLIRYIYKAIG----------IELPEKFDRI 269

Query: 169 TVAEAFARYA--------NIDLGTTLDNPDQPDRHLLYLQAQQAG 205
           T  EA  +Y          +++    +     D  ++    ++ G
Sbjct: 270 TYEEAMEKYGSDKPDRRYGMEMVDLTEFFKNSDFKIIKEVLERGG 314



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 52/178 (29%), Gaps = 10/178 (5%)

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGI 232
           A   N++ G         +R  +        ++V         F  +             
Sbjct: 371 AEKYNMNEGEVFIIAAHDNRERMNEALGALRLKVGKQYVKVSGFDALWVVDFPFLEWSEE 430

Query: 233 NCCTILDRYPAPESALANI---YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
               +   +P     + ++             +++     E+      +     Q   F+
Sbjct: 431 EGRFVARHHPFTMPYIEDLEGGVELSKVRAHAYDMVINGFEVGGGSIRIHRRDIQEKVFD 490

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                K+    E       FL  L   +P   GIA G DRL  +  G +NI EVI  P
Sbjct: 491 IIGLTKE----EAKEKFGFFLDALQYGVPPHGGIAFGLDRLAAIAAGVDNIREVIAFP 544


>gi|153823939|ref|ZP_01976606.1| aspartyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126518543|gb|EAZ75766.1| aspartyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 482

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                      +   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMIREMWLELLNVDLG----------DFPIMPYSEAMRRF-GSDKPDLRNPMEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLLKDVDFKVFSGPANDPKGRV 318


>gi|313678619|ref|YP_004056359.1| aspartate--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950297|gb|ADR24892.1| aspartate--tRNA ligase [Mycoplasma bovis PG45]
          Length = 567

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 80/231 (34%), Gaps = 19/231 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  ++ R  I   +R +  EN+FIEI++ +L   +P      R F      +   
Sbjct: 125 RRPEMQKTIMFRAKIMHEIRNFLYENEFIEIETPTLAKSTPEG---ARDFLVATRNK--- 178

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G EK +  A  +R+ +     QPEF  L+   +  + +  
Sbjct: 179 GQFWALPQSPQLFKQLLMISGFEKYYQIARCYRDEDSRKDRQPEFVQLDIETSFLNVDDF 238

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNPD 190
            K    +++     A  K+ +              I  A+A   Y +   DL       D
Sbjct: 239 HKIIEKLVKRIMSSAGIKVKT----------PFLKIKYADAIKDYGSDKPDLRYEYKITD 288

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             D       A     +         I ++     +E     N   IL  +
Sbjct: 289 INDFCNETDFAIIKDAKSKRMLFVDSIVNKKEFSILEEIAKKNKANILFYF 339



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 17/152 (11%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
             +  ++ I    + E  E     +         A      +    D      ++L    
Sbjct: 402 KDEYRFAWIVDWPMFEFNEDENKWDAAHHPFTRFAHTLDELDKLSIDKINAIAYDLVLNG 461

Query: 269 IELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
            E+      + D   Q   F      +++ + K             FL      +P   G
Sbjct: 462 FEIAGGSARIYDKNMQEKMFNLIGLTKEQQESKFG----------WFLKAFDYGVPPHCG 511

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DRL+ML+    +I +VI  P +  NQ+
Sbjct: 512 IAFGLDRLIMLLAHQKSIRDVIPFPKNSKNQD 543


>gi|218282369|ref|ZP_03488651.1| hypothetical protein EUBIFOR_01233 [Eubacterium biforme DSM 3989]
 gi|218216655|gb|EEC90193.1| hypothetical protein EUBIFOR_01233 [Eubacterium biforme DSM 3989]
          Length = 578

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 73/243 (30%), Gaps = 31/243 (12%)

Query: 11  NRDFHYR------RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
             D   +      RRP L K    RN I   +R Y  +  F E+++  L   +P     +
Sbjct: 115 LEDTRLKYRYLDLRRPVLQKNLILRNRITLLVRNYLAKYGFTEVETPILCRSTPEGARDY 174

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+  G ++ F  A  +R+ +     QPEF+
Sbjct: 175 LVPSRISKGEFYALPQ------SPQLYKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFS 228

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +    E +      +++   +                  E + I       +Y 
Sbjct: 229 QIDIEMSFVDEEDIWSMTEGLMKEIFKDIKG----------IELPEFKRIPYDTCMEKYG 278

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
           +       D P      +      +      ++     I   + ++             L
Sbjct: 279 SDKPDLRFDMPLYNVSEVFANTEFKVFENCLNE---GGIIQAMNVKNGADKFSRKQLDKL 335

Query: 239 DRY 241
             Y
Sbjct: 336 QDY 338



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 47/136 (34%), Gaps = 5/136 (3%)

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
              + E  E              P  E     +      +++ ++L     EL +    +
Sbjct: 425 DFPMFEYDENENRYVAAHHPFTSPNLEDVDKLMSDPAHCYSRAYDLVLNGYELLSGSIRI 484

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
            D   Q   FE      +    E +     F+       P   G+ +G +RL M++ G +
Sbjct: 485 HDQKLQEKVFEAIGMTLE----EAHEKFSWFMDAFQYGTPPHGGVGIGLERLTMILAGTD 540

Query: 338 NINEVIWTPFSQSNQE 353
           NI +V+  P + S  +
Sbjct: 541 NIRDVVAFPKTASASD 556


>gi|154482689|ref|ZP_02025137.1| hypothetical protein EUBVEN_00365 [Eubacterium ventriosum ATCC
           27560]
 gi|149736465|gb|EDM52351.1| hypothetical protein EUBVEN_00365 [Eubacterium ventriosum ATCC
           27560]
          Length = 596

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 72/189 (38%), Gaps = 20/189 (10%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFST 64
           +    R  H +R   L  R+ I + +R++     FIEI++ +L + +P     ++     
Sbjct: 134 RYLDLRKPHLQRN--LKMRSDITTFIRKFMSNEGFIEIETPTLCKSTPEGARDYLVPSRV 191

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   
Sbjct: 192 HPGCFYALPQ------SPQLYKQLLMCSGFDRYIQIAKCYRDEDLRADRQPEFTQVDMEL 245

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    + ++     +++   +            + +     + +T  EA  RY   D   
Sbjct: 246 SFVDVDDVIDVNERLLKALFKEIL---------DVDVQLPIQRMTWIEAMNRY-GSDKPD 295

Query: 185 TLDNPDQPD 193
           T    +  D
Sbjct: 296 TRFGMELID 304



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 46/156 (29%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q  +       +  +      E  +              P  E         
Sbjct: 413 ALRLELAEQLDLIDKSKFNFLWVVEFPQFEWSDEQNRFLAMHHPFTMPMDEDLDYIESDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q    +      +      +      L    
Sbjct: 473 GRVRAKAYDIVLNGSEIGGGSVRIHQADVQERMLKALGFTTEA----AHEQFGFLLDAFK 528

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVM +TG +NI EVI  P  +
Sbjct: 529 YGVPPHAGLAYGLDRLVMHMTGEDNIREVIAFPKVK 564


>gi|2688349|gb|AAB91506.1| aspartyl-tRNA synthetase (aspS) [Borrelia burgdorferi B31]
          Length = 506

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E     +    +   P  +         
Sbjct: 325 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNP 384

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +EL +    + +   Q+  F+    +K+K  +        FL  L 
Sbjct: 385 KKTIGEIYDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKSED----RFGFFLKALE 440

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 441 YGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 473



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 99/299 (33%), Gaps = 17/299 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + ++ +F+E+++ +    +P      R F     I    
Sbjct: 51  RRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGA---RDFVIPSRIH--- 104

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 105 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 164

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +                +   R+       + +  + 
Sbjct: 165 IFKLIENMLFLIFKNCININLPKKFKKITYKKAMNKYGSDKPDTRFELELQDISRNLKNS 224

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                      +  I++      +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 225 EFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY-FTKIENNKFSG 283

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             A    T+  EL        N        +  E   +   +++ K         IDE+
Sbjct: 284 GIAKFLKTEEQELIKTYSLENNDIIFFTANNNWETACKAMGQIRIKIANDL--GLIDEN 340


>gi|332296917|ref|YP_004438839.1| aspartyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180020|gb|AEE15708.1| aspartyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 605

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 50/151 (33%), Gaps = 15/151 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +  G+       ++ I    + E  E     +    +   P  +                
Sbjct: 434 KDLGLCDPDAFAFAWIVDFPMFEWNEDECKWDTAHHMFTMPQEKYHATLESDPGSVKGDL 493

Query: 262 FELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACLTE 315
           ++L     EL +    + DP  Q+  F      E E Q+K     E +            
Sbjct: 494 YDLVLNGYELASGSIRIHDPDLQKRIFKIVGFDEAEGQKKFGFLTEAFK---------YG 544

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   GIA G DRLVML+    +I EVI  P
Sbjct: 545 APPHGGIAPGLDRLVMLMCKETSIKEVIAFP 575



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 69/204 (33%), Gaps = 13/204 (6%)

Query: 5   PSQPWWNRDFHYRRRPF-----LLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNET- 57
           P++    +  +   R       L  R+ +  ++R Y   + F E+++ + ++ +P     
Sbjct: 129 PNEDLRLKFRYLDLRTASMQHHLALRHKVTIAVRNYLDAHNFYELETPTFIKSTPEGARD 188

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
           ++            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEF
Sbjct: 189 YLVPSRLYPGKFYALPQ------SPQLYKQLLMVSGFDRYFQIARCYRDEDARGDRQPEF 242

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T ++   +  S + ++     +++   +       +            ++    +   R+
Sbjct: 243 TQIDMEMSFVSRDDVLAMTEGMMQAVFKETMGIDLALPFQRIAYDDAIDWYGSDKPELRF 302

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQA 201
                           +      A
Sbjct: 303 GMKMQDGAFLAELGTFQAFKDALA 326


>gi|312794170|ref|YP_004027093.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181310|gb|ADQ41480.1| aspartyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 594

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +   +R +  +N FIEI++  L   +P     ++            
Sbjct: 140 RRPNMQRNLMFRHKLYQVVRNFLSQNGFIEIETPMLTKSTPEGARDYLVPSRIFPGKFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 200 LPQ------SPQLFKQLLMVAGFDRYFQIVKCFRDEDLRADRQPEFTQIDIEMSFVDVDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +++                        E     +   R+  ++L    D    
Sbjct: 254 VIEINEKLLQTIFGEMLGIDLKLPLPRLTYKEAMERFGSDKPDTRF-GMELVDITDIVKN 312

Query: 192 PDRHLLYLQAQQAG 205
            +  +    A + G
Sbjct: 313 CEFKVFSDAANKGG 326



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 49/158 (31%), Gaps = 9/158 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A++  +          +    L E  E              P  E         
Sbjct: 414 NLRLEIARKLNLLDKSKFNLLWVVEFPLFEYSEEEGRFVAKHHPFTSPMDEDIEFLETDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
               +K +++     E+      +  P  Q+  F      K   + E    D     L  
Sbjct: 474 ARVRSKAYDIVLNGTEIGGGSIRIHSPEIQKRMF------KALGFTEERAQDRFGFLLEA 527

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                P   GIA GFDRL ML+ G ++I + I  P  +
Sbjct: 528 FKYGTPPHGGIAYGFDRLCMLLLGLDSIRDTIAFPKVK 565


>gi|300781081|ref|ZP_07090935.1| aspartate--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532788|gb|EFK53849.1| aspartate--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 624

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 68/187 (36%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R+   L  R+    + R+   +++F+EI++ +L   +P      R F     +    
Sbjct: 137 RRERQAEALRLRSKANKAARDVLSKHEFVEIETPTLTRSTPEG---ARDFLVPARL--RP 191

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ F  A  +R+ +     QPEFT L+   +    + +
Sbjct: 192 GSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQPEFTQLDIEASFVDQDDI 251

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++    I+    ++   +I +              +T  EA  +Y +       D     
Sbjct: 252 IELAEEIVVELWKLIGYEIPT----------PIPRMTYKEAMEKYGSDKPDLRFDIELVE 301

Query: 193 DRHLLYL 199
                  
Sbjct: 302 CTDFFKD 308



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 5/106 (4%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P PE   +            +++     E+      + +   Q+  F+           E
Sbjct: 462 PKPEYLDSFDKEPGEALAYAYDIVCNGNEIGGGSIRIHNQDVQKRVFDVMGI----GDEE 517

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   L   +   P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 518 AQEKFGFLLDAFSFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 563


>gi|161511079|ref|NP_212580.2| aspartyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|195942026|ref|ZP_03087408.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 80a]
 gi|218249506|ref|YP_002374958.1| aspartyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223888743|ref|ZP_03623334.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|226321756|ref|ZP_03797282.1| aspartyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|6920080|sp|O51402|SYD_BORBU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226736530|sp|B7J213|SYD_BORBZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218164694|gb|ACK74755.1| aspartyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223885559|gb|EEF56658.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|226232945|gb|EEH31698.1| aspartyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 586

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E     +    +   P  +         
Sbjct: 405 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +EL +    + +   Q+  F+    +K+K  +        FL  L 
Sbjct: 465 KKTIGEIYDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKSED----RFGFFLKALE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 521 YGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 99/299 (33%), Gaps = 17/299 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + ++ +F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGA---RDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +                +   R+       + +  + 
Sbjct: 245 IFKLIENMLFLIFKNCININLPKKFKKITYKKAMNKYGSDKPDTRFELELQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                      +  I++      +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 305 EFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY-FTKIENNKFSG 363

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             A    T+  EL        N        +  E   +   +++ K         IDE+
Sbjct: 364 GIAKFLKTEEQELIKTYSLENNDIIFFTANNNWETACKAMGQIRIKIANDL--GLIDEN 420


>gi|297588537|ref|ZP_06947180.1| aspartate--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297573910|gb|EFH92631.1| aspartate--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 588

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 57/160 (35%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  I    L E  E              P  E     +   
Sbjct: 411 ALRNKIARDMNLVDNDTFEFVWIVDFPLFEFDEEENRFVAMHHPFTMPKEEDIQYLLTDK 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +    K +++     E+      + +   Q+  FE  ++  +++    +     F+    
Sbjct: 471 EKVRAKAYDIVCNGDEIGGGSIRINNSDLQKKMFEA-LELTEEMIENKFG---FFVEAFN 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A G DRL+ML+ G +NI +VI  P +QS  +
Sbjct: 527 YGTPPHGGLAYGMDRLMMLLVGTDNIKDVIAFPKTQSATD 566



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 18/202 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + +  L  R      +R+Y  EN F EI++  L + +P     ++ A          
Sbjct: 137 RKPKLQNNLKLRAKTNKLIRDYLDENGFYEIETPFLGKPTPEGARDYLVASRVNEHSFYA 196

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    E 
Sbjct: 197 LPQ------SPQLMKQLLMISGMDRYYQIVKCFRDEDLRANRQPEFTQVDMEMSFVDQED 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I+   +                 +  + +T AEA  RY   D        + 
Sbjct: 251 VMTLNEGLIKKLFKEIRGIDIP---------TPIKRMTYAEAMERY-GCDKPDLRFGFEL 300

Query: 192 PDRHLLYLQAQQAGIRVAHDDT 213
            +   L   ++       +D  
Sbjct: 301 KNITELVKDSEFKVFSSCNDKN 322


>gi|110833610|ref|YP_692469.1| aspartyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|123050640|sp|Q0VRK1|SYD_ALCBS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110646721|emb|CAL16197.1| aspartyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 587

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                      R+ +   +R +     F+++++  L   +P     ++    T       
Sbjct: 132 RRPDVLKNFQFRSRLTHVVRAFLEGEGFMDVETPILTRATPEGARDYLVPSRTHPGSFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 192 LPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDLEASFVEEED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++R   +                  +   +  +EA  R+   D        + 
Sbjct: 246 IMGITERMVRSVFKELLS----------VDLPDFPRMPFSEAMQRF-GSDKPDLRIALEL 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 295 IDIADLLAGVDFKVFSGPANDPKGRV 320



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 6/138 (4%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           W+ ++        E     +        P+  +      P +   ++ +++     EL  
Sbjct: 426 WAPLWVVDFPMFEEDEGQYHALHHPFTMPSCSAEELKSNPGEA-LSRAYDMVLNGTELGG 484

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVML 332
               +  P  QR  FE           E        L  L    P   G+A G DR+VML
Sbjct: 485 GSIRIHSPAMQRTVFEALGIS----DEEAEEKFGFLLDGLKYGAPPHGGLAFGLDRMVML 540

Query: 333 VTGANNINEVIWTPFSQS 350
           +TG  +I +VI  P +Q+
Sbjct: 541 MTGCESIRDVIAFPKTQT 558


>gi|325697963|gb|EGD39846.1| aspartate--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 584

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIDVS---------LPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTELVKGVDFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 47/156 (30%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +  A    +  +    + E  E              P  +S        
Sbjct: 402 ALRVRLAKELDLIDADTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                  +++     EL      +     Q   F       K +        E F   L 
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERMF-------KALGFSAQEAVEQFGFLLE 514

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 515 AMDYGFPPHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|164687516|ref|ZP_02211544.1| hypothetical protein CLOBAR_01157 [Clostridium bartlettii DSM
           16795]
 gi|164603290|gb|EDQ96755.1| hypothetical protein CLOBAR_01157 [Clostridium bartlettii DSM
           16795]
          Length = 602

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 70/201 (34%), Gaps = 28/201 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R            L+ R+ +   +R+Y  EN F+EI++  L   SP     ++ 
Sbjct: 133 DKRLKYRYLDLRKPSMQNNLIMRSRVAQIVRQYLSENNFLEIETPFLIKPSPEGARDYLV 192

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ +G ++ F     +R+ +     QPEFT +
Sbjct: 193 PSRVNPGKFYALPQ------SPQLFKQILMVSGMDRYFQIVKCFRDEDLRADRQPEFTQI 246

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +      +M    N+I              +  N +     + +T  EA  R+   
Sbjct: 247 DCEMSFVDENDVMTMMENMIG---------RIFKEIHNIDIQLPLKRMTYKEAMDRF-GS 296

Query: 181 DLGTTLDNPDQPDRHLLYLQA 201
           D   T    +  D   L    
Sbjct: 297 DKPDTRFAMELTDLSDLVKDC 317



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 49/137 (35%), Gaps = 14/137 (10%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-----FTKRFELYACNIELC 272
              +    +          I   +P       +I   D         K +++     EL 
Sbjct: 438 LLWVTEFPLFEEDEETGRMIAMHHPFTCPLDEDIDKLDQEDKTQLRAKAYDMVLNGYELG 497

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQSSGIAMGFDRL 329
                + D   Q   F      K    ++    D+    L      +P  +G+A GFDRL
Sbjct: 498 GGSVRISDEEVQEKMF------KALGMSQETANDKFGYLLEAFKYGVPPHAGLAFGFDRL 551

Query: 330 VMLVTGANNINEVIWTP 346
           +ML+TGA+NI EVI  P
Sbjct: 552 MMLLTGADNIREVIAFP 568


>gi|296272666|ref|YP_003655297.1| aspartyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096840|gb|ADG92790.1| aspartyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 583

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 76/231 (32%), Gaps = 33/231 (14%)

Query: 3   QIPSQPWWNR----DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
            +P     +     +   R R               R+    ++R    E +F+++++  
Sbjct: 108 PMPFD-LGDEKVNEEIRLRNRFLELRTKKSYDIFKLRSTANIAIRNCLNEMEFLDVETPI 166

Query: 49  LQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
           L   +P     ++            + +      SP+   + L+ +G +K F  A  +R+
Sbjct: 167 LTKSTPEGARDYLVPSRVHPGEFYALPQ------SPQIFKQLLMVSGFDKYFQIAKCFRD 220

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
            +     QPEFT ++   +  + E ++K    +I        + +               
Sbjct: 221 EDLRADRQPEFTQIDVEMSFCTQEDVIKVAEKLIHDTFTACGKDVPET----------FP 270

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
            +T  EA  +Y +       D P      +    + +    +A D   + I
Sbjct: 271 RMTYNEAMEQYGSDKPDLRFDMPLVDVIDIFARSSNEIFASIAKDKAHNRI 321



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P       N    +   +  +++     EL      +     Q+  F           
Sbjct: 446 HHPFTMPKDLNKDNLEEIESIAYDIVLNGTELGGGSIRIHKENIQKEVF----SLMGISD 501

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +        L  L    P   G A+G DR++ML+ G ++I +VI  P
Sbjct: 502 EDAREKFGFLLDALQFGAPPHGGFALGLDRMIMLLAGTDSIRDVIAFP 549


>gi|327398593|ref|YP_004339462.1| aspartyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181222|gb|AEA33403.1| aspartyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 595

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 72/207 (34%), Gaps = 17/207 (8%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
           N +   + R            L+ R+    + R Y     FIEI++  L   +P      
Sbjct: 126 NEEVRLKYRYLDLRKPHMQRNLIMRSKAAFAARNYLHSQGFIEIETPILTKSTPEG---A 182

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F     +     +   L  SP+   + L+ +G +K +     +R+ +     QPEFT 
Sbjct: 183 RDFLVPSRLS--PGRFYALPQSPQLFKQLLMVSGYDKYYQITKCFRDEDLRADRQPEFTQ 240

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++   +    + +++    I+    +       +      +     +     +   R+  
Sbjct: 241 IDLEMSFVEEDDVIEVTEGILASIFKEVAGIDINPPFKRISYQEAMDRFGSDKPDMRF-G 299

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGI 206
           ++L    D  +  +  +     ++ GI
Sbjct: 300 LELKKLTDIVENTNFKVFRDVVEKGGI 326



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 47/354 (13%), Positives = 90/354 (25%), Gaps = 33/354 (9%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS----PGNETHIRAFST 64
           + + D    R+P       I   +  +  E+  IE+    L        G + +   F  
Sbjct: 225 FRDEDLRADRQPEF---TQIDLEM-SFVEEDDVIEVTEGILASIFKEVAGIDIN-PPFK- 278

Query: 65  ELIIQDHIRKPLYLQTSPE----FSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              I        +    P+       KKL    E   F                     +
Sbjct: 279 --RISYQEAMDRFGSDKPDMRFGLELKKLTDIVENTNFKVFRDVVEKGGIVYGLNAKGCI 336

Query: 121 EWYRAHESY-----EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           ++ R                 +  I+  A    Q                + +       
Sbjct: 337 DFTRKEIDDLTKLVSIYGAKGLAWIKVKANYELQSPIVKFFSKEEIDGILKRLDAEPGDL 396

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
            +   D    + +     R       ++  +    +  +  +    L E  E        
Sbjct: 397 LFFMADTPKVVYDSLGALR---LEIGRKLNLTNGDEFNFVWVVDFPLFEWNEDENRWEAM 453

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
                 P PE              + +++    +E+      +     Q+  F      K
Sbjct: 454 HHPFTSPKPEDLEYLESDPARVKARAYDITLNGVEIGGGSIRIHRSDVQKRMF------K 507

Query: 296 KKI--YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  E        +  L    P   G+A+GFDR++ L+    +I +VI  P
Sbjct: 508 ALGISDEEAQVKFGFLIEALKYGAPPHGGLALGFDRIMTLILKEKSIRDVIAFP 561


>gi|255536117|ref|YP_003096488.1| aspartyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255342313|gb|ACU08426.1| Aspartyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 584

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 79/234 (33%), Gaps = 28/234 (11%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R Y  +  FIE+++  L   +P      R F     +    
Sbjct: 133 RRNPVKDKLIFRHKMAQKVRNYLSDQNFIEVETPVLIKSTPEG---ARDFVVPSRMN--P 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G ++ F     +R+ +     QPEFT ++   A    E +
Sbjct: 188 GQFYALPQSPQTFKQLLMIGGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDV 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGT 184
           ++    +     +    K           F +   +T A+A  +Y          ++   
Sbjct: 248 LEIFEGMTATLLKDITSK----------EFGKFPRMTFADAMQKYGNDKPDIRFGMEFVE 297

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEKIEPNLGINCCTI 237
             +     D  +        GI V    D        ++     P +G +    
Sbjct: 298 VNELVQGKDFKIFDEAELVVGINVEGCADYTRKQIDELIDWVKRPQIGASGMIW 351



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 48/153 (31%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R + +     +    L+E  E     +        P PE         
Sbjct: 404 ALRMELGNRLGLRNSKEFAPLWVIDFPLLEWDEETGRYHAMHHPFTSPKPEDVHLLESDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  ++L     E+      + D   Q   F+     K+    E        +    
Sbjct: 464 GKARANAYDLVLNGNEIGGGSVRIFDKDLQSKMFDLLGFTKE--DAEAQF--GFLMNAFK 519

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A GFDRLV ++ G   I + I  P
Sbjct: 520 YGAPPHAGLAFGFDRLVAILDGNEVIRDYIAFP 552


>gi|94272028|ref|ZP_01292054.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [delta
           proteobacterium MLMS-1]
 gi|93450263|gb|EAT01532.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [delta
           proteobacterium MLMS-1]
          Length = 595

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 81/261 (31%), Gaps = 21/261 (8%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     L+ R+    ++R +  +  F+EI++  L   +P     ++            
Sbjct: 140 RRPTMAANLVLRHQASQAIRNFLNDEDFLEIETPVLTRSTPEGARDYLVPSRVNPGRFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ +     +R+ +     QPEFT +++  +    E 
Sbjct: 200 LPQ------SPQLFKQLLMVAGMERYYQIVRCFRDEDLRADRQPEFTQVDFELSFVDEEG 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +++   +    +                 +T AEA AR+              
Sbjct: 254 VMAVAEGMMKNLFKATLGREL---------APPFPRMTYAEALARFGTDRPDLRFGLELV 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
              H++     Q    V  +       +             +       + A   A   I
Sbjct: 305 EITHVVKNCGLQVFRDVVENGGMVKSINAKGCAYFSRKDLDDLTAYAGEFGAKGLAWVKI 364

Query: 252 YPADPRFTKRFELYACNIELC 272
                  +   + +    +  
Sbjct: 365 KEDGQWQSPIAKFFTAEEQQA 385



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 17/164 (10%)

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
            Q    L    A++  +    D ++  +    L+E                 P  E    
Sbjct: 409 HQALAELRLELARRLELVSREDFSFVWVTDFPLLEYDAEAKRHAAVHHPFTAPREEDLPL 468

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETY 303
                    ++ ++L     E+      +  P  QR  F       +E+++K        
Sbjct: 469 LDSDPGRVRSRAYDLVLNGNEIGGGSIRIHQPDLQRQVFTALGITPEEVKDKFA------ 522

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 +  L    P   G+A G DRL+ML+ G ++I +VI  P
Sbjct: 523 ----FLVQALELGAPPHGGMAFGLDRLLMLLAGCDSIRDVIAFP 562


>gi|260583854|ref|ZP_05851602.1| aspartate--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158480|gb|EEW93548.1| aspartate--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 585

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 74/209 (35%), Gaps = 20/209 (9%)

Query: 16  YRRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+P L     R+    ++REY     FI++++  L   +P     ++           
Sbjct: 134 MRRKPVLENLRLRHKTTRAIREYLDTEGFIDVETPYLAKSTPEGARDYLVPSRVHEGSFY 193

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+  G ++ +     +R+ +     QPEFT ++   +  S E
Sbjct: 194 ALPQ------SPQTFKQLLMGGGLDRYYQIVRCFRDEDLRGDRQPEFTQVDIETSFLSAE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++ +    +++   +       +         +    ++ AEA +RY N    T      
Sbjct: 248 EIQEMMEGLLKKVMKDTLGVEVT---------TPFPRLSFAEAMSRYGNDKPDTRFALEL 298

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
                ++     +    V  +       +
Sbjct: 299 IDVADIVKDSDLKVFSTVVENGGHVKALN 327



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 47/146 (32%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +       +  +    L+E  E              P  E   A +        + 
Sbjct: 415 RKHELIDQSKFNFLWVVDWPLLEYDEDANRYVAMHHPFTRPVNEDFNALLEDPAAAKAQA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   F      K+             +  L    P   
Sbjct: 475 YDIVLNGYELGGGSLRIYRRDMQEAMFNVLGFTKES----AQEQFGFLMDALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DRLVML+ G +NI EVI  P
Sbjct: 531 GIALGLDRLVMLLAGEDNIREVIAFP 556


>gi|315157281|gb|EFU01298.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0043]
          Length = 589

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 68/188 (36%), Gaps = 22/188 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP     +  R+ +  ++R Y   + F++I++  L + +P     ++            
Sbjct: 135 RRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQIDIETTFLTPEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     N++    +                      ++  EA ARY   D   T    + 
Sbjct: 249 IQTYTENMLAEVMKETKGIEIP---------VPFPRMSYDEAMARY-GSDKPDTRFAMEL 298

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 299 IDVAEVVK 306



 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 46/146 (31%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    L E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   FE     K+    E        L  L    P   
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKE----EAQDQFGFLLDALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DRL ML+ G  NI EVI  P
Sbjct: 531 GIALGLDRLAMLLAGEENIREVIAFP 556


>gi|313682127|ref|YP_004059865.1| aspartate--tRNA(asn) ligase [Sulfuricurvum kujiense DSM 16994]
 gi|313154987|gb|ADR33665.1| aspartate--tRNA(Asn) ligase [Sulfuricurvum kujiense DSM 16994]
          Length = 584

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 72/212 (33%), Gaps = 9/212 (4%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLY 77
              + R+    + R       F+E+++  L   +P     ++            + +   
Sbjct: 138 NTFMLRSKAAIAARNVLDRLGFLEVETPILTKSTPEGARDYLVPSRVHEGEFYALPQ--- 194

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   +  + E +++   
Sbjct: 195 ---SPQLFKQLLMVGGFDRYFQIAKCFRDEDLRADRQPEFTQIDVEMSFCNQEDVIRVAE 251

Query: 138 NIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
            +I      A  ++ + F  +  N   E       +       ID+       D      
Sbjct: 252 ELITGMFAAAGHEVHTPFNRIKYNDAMEWYGSDKPDLRYDLKMIDVIDIFARCDNEIFTS 311

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           +    +   I+         +FS+  ++  E 
Sbjct: 312 IAANPKMNRIKALRVPGADLVFSKREMKSFED 343



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 5/108 (4%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P       N    +   +  +++     EL      +     Q   F           
Sbjct: 448 HHPFTMPRDLNHEHLEDIESIAYDIVLNGTELGGGSIRIHKQALQEQIFT----LLGIGE 503

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L  L    P   G A+GFDR +ML++   +I +VI  P
Sbjct: 504 EEAQEKFGFLLDALKFGAPPHGGFAIGFDRFMMLLSKKESIRDVIAFP 551


>gi|312149409|gb|ADQ29480.1| aspartyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 586

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E     +    +   P  +         
Sbjct: 405 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +EL +    + +   Q+  F+    +K+K  +        FL  L 
Sbjct: 465 KKTIGEIYDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKSED----RFGFFLKALE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 521 YGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 99/299 (33%), Gaps = 17/299 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + ++ +F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEGA---RDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +                +   R+       + +  + 
Sbjct: 245 IFKLIENMLFLIFKNCININLPKKFKKITYKKAMNKYGSDKPDTRFELELQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                      +  I++      +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 305 EFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY-FTKIENNKFSG 363

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             A    T+  +L        N        +  E   +   +++ K         IDE+
Sbjct: 364 GIAKFLKTEEQKLMKTYSLENNDIIFFTANNNWETACKAMGQIRIKIANDL--GLIDEN 420


>gi|302387916|ref|YP_003823738.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302198544|gb|ADL06115.1| aspartyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 640

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 71/221 (32%), Gaps = 8/221 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +  R+ + +  R +  E  F+EI++ +L   +P     ++            
Sbjct: 185 RRPDIQRNIRVRSQVATLTRAFLAEEGFLEIETPTLIKSTPEGARDYLVPSRVHPGSFYA 244

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 245 LPQ------SPQLYKQLLMCSGYDRYFQLARCYRDEDLRADRQPEFTQIDMELSFVDVED 298

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +++   +                    +     +   R+       +    D 
Sbjct: 299 VLEVNERLLKKLFKEICNLDIELPLTRMTWREAMDRFGSDKPDMRFGMELKNVSQVVKDT 358

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                         +R  + +    +  + +   +E   G 
Sbjct: 359 EFAVFKSALENGGSVRGINAEGQGAMPRKKIDALVEYAKGF 399



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  +       +  +    L+E  E              P  E         
Sbjct: 459 NLRLELARQLDLLKKDHFKFLWVTEFPLLEYSEEQGRFTAMHHPFTMPMDEDWALIDRDP 518

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     EL      +     Q   FE     K++  ++        L    
Sbjct: 519 GAVRAKAYDIVLNGTELGGGSVRIHQSDIQSKMFEVLGFTKEQAKDQ----FGFLLDAFK 574

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DR+VML+ GA++I +VI  P  +
Sbjct: 575 YGVPPHAGLAYGLDRVVMLMVGADSIRDVIAFPKVK 610


>gi|257064755|ref|YP_003144427.1| aspartyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256792408|gb|ACV23078.1| aspartyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 593

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 48/150 (32%), Gaps = 12/150 (8%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A    I          +   +     E              P  +  L    P     + 
Sbjct: 423 ADALNIPREGHALLWVVNFPMFGYDPEEGKYSAEHHPFTMVPPDQQHLIEDDPLACG-SY 481

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EM 316
            ++L     E       + +   QR         +  + +E   IDE F   L  L    
Sbjct: 482 SYDLVMDGFEAGGGTIRVHNADLQRRVL-----RRCGLTDE--EIDEKFGHLLRALELGA 534

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   GIA+G DRLVML+ G  +I +VI  P
Sbjct: 535 PPHGGIALGLDRLVMLLAGKQSIRDVIAFP 564



 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 22/191 (11%)

Query: 16  YRRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDH 71
            RR         R+ +  ++R    +  FIE+++  L   +P      R F         
Sbjct: 142 LRRPEMFQTIKLRHTVAQAMRGALNKRGFIEVETPILANSTPEG---ARDFLVPSRPN-- 196

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +    E
Sbjct: 197 -PGKFYALPQSPQQFKQMLMCGGIERYYQIARCFRDEDLRADRQPEFTQVDVEMSFVEGE 255

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M    ++++   E  N                 + +  A+A   Y   D      +  
Sbjct: 256 DVMDMMESVMQEVLEAVN----------VEHEFPLQRMQYADAM-EYYGCDRPDIRFDMK 304

Query: 191 QPDRHLLYLQA 201
             +   +    
Sbjct: 305 LVNLSEIVRDC 315


>gi|322374025|ref|ZP_08048559.1| aspartate--tRNA ligase [Streptococcus sp. C150]
 gi|321276991|gb|EFX54062.1| aspartate--tRNA ligase [Streptococcus sp. C150]
          Length = 583

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 71/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  ++R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRMRYRYLDLRRPEMLENFKLRAKVTHAIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       + Q    +           +   R+  +
Sbjct: 236 DLETSFLNEQEIQDITEGLIAKVMKETKGINVTLQFPRMSYDDAMNNYGSDKPDTRFDML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T        +      A +   ++   D        ++   
Sbjct: 296 LQDLTDIVKGVDFKVFAEAPAVKAIVVKGNADKYSRKSIDKLTEF 340



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  ESA       
Sbjct: 402 ALRNQIAKELDMIDTTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESASNLEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                  +++     EL      +     Q          K   ++E    ++    L  
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINHKDLQERML------KALGFSEESAYEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|213619157|ref|ZP_03372983.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 252

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 51/138 (36%), Gaps = 18/138 (13%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ +     +R+ +  
Sbjct: 169 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLR 222

Query: 111 CLHQPEFTMLEWYRAHES 128
              QPEFT ++   +  +
Sbjct: 223 ADRQPEFTQIDVETSFMT 240


>gi|78048842|ref|YP_365017.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|97197021|sp|Q3BQE6|SYD_XANC5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78037272|emb|CAJ25017.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 588

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 78/229 (34%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 110 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEG---ARDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +           V+ +  ++   +
Sbjct: 224 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMIRAIFKEV---------VDVDLAAQFPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D        +  D   L   +Q      A DD    +
Sbjct: 275 TWAEAMRRY-GSDKPDLRIALELVDVAELVKASQFPVFTAAADDADGRV 322



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    VA       +    + E  +              PA +        A 
Sbjct: 408 ALRLKAGKDFNLVADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANAR 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 468 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 524 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 555


>gi|115384700|ref|XP_001208897.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114196589|gb|EAU38289.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 527

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 61/394 (15%), Positives = 109/394 (27%), Gaps = 53/394 (13%)

Query: 5   PSQPWWNRDF-----HYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQY 51
           P + + + +F     H R R          R+     L   F       F+++    +  
Sbjct: 129 PEKKYHSPEFLRQIPHLRIRTPFNSLLSRFRSECLYQLGNVFRSAPNGGFVQVHPPLITS 188

Query: 52  S---PGNETHIRAFST-----ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHA 103
           S      ET            +   +   R P YL  S +   +   AA    ++  +  
Sbjct: 189 SDCEGAGETFTVVPREAMGSQQPDGEHFFRAPKYLTVSSQLHLEAY-AAELGNVWTMSPM 247

Query: 104 WRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNII------RCAAEVANQKIFSFQN 156
           +R  +     H  EF MLE           +   +  +      R       Q+I + + 
Sbjct: 248 FRAEKSDTPRHLSEFYMLEAEVNFIYDLDALTGLVEHLLRDLTRRLYDTPVGQEILAAKR 307

Query: 157 VNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
                   P+             +D               L            ++  W+D
Sbjct: 308 SGEAGQEHPDESNAVLRQRWQDMMDGPRWARITYTDAIAALQDAVASGQASFEYEPQWTD 367

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
                  + I   L       +  YP          P+D       +  AC   L     
Sbjct: 368 GLQLEHEKYIVDVLHRGRPVFVTDYPKAIKPFYMA-PSDASTAPPGDTVACFDLLLPEVS 426

Query: 277 ELLDPIEQRHRFEKEMQEKKKIY-----NETYPID-----------EDF-----LACLT- 314
           E+     + HR  + +Q  +  +     +E    D           ED       A L  
Sbjct: 427 EVAGGSLREHRLPQIIQNMRDHFLIKTRDEQSSPDAEPLYPHLLPGEDLGHLQWYADLRR 486

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +GFDR +  + G +++ +V+  P 
Sbjct: 487 WGTAPHGGFGLGFDRFLGFLAGVSSVRDVVSFPR 520


>gi|78780166|ref|YP_398278.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|97196790|sp|Q317V3|SYD_PROM9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78713665|gb|ABB50842.1| aspartyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 598

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 66/192 (34%), Gaps = 26/192 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L  R+ I    RE+     F E+++  L   +P      R 
Sbjct: 125 ELRLKYRYLDLRRGKLLKNLKTRHKIIKVAREFLDNFGFTEVETPLLTKSTPEG---ARD 181

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     + +   +   L  SP+   + L+  G +K +  A  +R+ +     QPEFT L+
Sbjct: 182 FLIPSRLSN--GEFFALPQSPQLFKQLLMVGGLDKYYQIAKCFRDEDLRADRQPEFTQLD 239

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  S E+++    ++I+   +            N N  +    +    A   Y   D
Sbjct: 240 IEMSFISEEEIISFNESLIKKIWKEVL---------NINFDNAFPRMKWQAAMDNY-GTD 289

Query: 182 LGTTLDNPDQPD 193
              T       D
Sbjct: 290 RPDTRYQMLLKD 301



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 50/154 (32%), Gaps = 14/154 (9%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN---IYPADP 256
            A+   +       +  +    L E+ E              P    +  +       + 
Sbjct: 420 IAKDLNLIDTSKWNFLWVTDFPLFERNEEENRYEALHHPFCSPKNIKSKDSENLKKAIEN 479

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL 313
                ++L    +EL      + +   QR   +        +      IDE F   +  L
Sbjct: 480 SIANAYDLVLNGLELGGGSLRIHEANLQREVLKT-------VGLTDKEIDEKFGFLIEAL 532

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA G DR+ ML+ GA++I E I  P
Sbjct: 533 EMGAPPHGGIAFGLDRITMLIIGADSIRETIAFP 566


>gi|325695823|gb|EGD37720.1| aspartate--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 584

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 73/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +                      +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKG---------IEFSLPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTELVKGVDFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 46/156 (29%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +S        
Sbjct: 402 ALRVRLAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                  +++     EL      +     Q   F       K +        E F   L 
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERMF-------KALGFSAQEAAEQFGFLLE 514

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 515 AMDYGFPPHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|331090642|ref|ZP_08339493.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330401082|gb|EGG80677.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 599

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 66/191 (34%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ + +  R++  E  F+EI++  L   +P     ++            
Sbjct: 141 RRPDLQRNLIMRSQVATLTRQFLAEEGFLEIETPMLIKSTPEGARDYLVPSRVHQGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIFKQLLMCAGYDRYFQIVKCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +       S            + +T  EA  R+   D        + 
Sbjct: 255 VIDVNERLLAKVFKEILDVEVS---------LPIQRMTWQEAMDRF-GSDKPDIRFGMEL 304

Query: 192 PDRHLLYLQAQ 202
            D   +    +
Sbjct: 305 TDVSEVVKDCE 315



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  +   ++  +  +    L+E  E              P  E         
Sbjct: 415 NLRLEIARQLELLDKNEYKFLWVTEFPLLEWNEEAGRYTAMHHPFTMPMEEDLHLIDTEP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     EL      + +   Q   FE     K++            L    
Sbjct: 475 GKVRAKAYDIVLNGTELGGGSVRIFNQDIQNKMFEVLGFTKEQ----AQEQFGFLLNAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRL+ML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLIMLMAKQDSIRDVIAFPKVK 566


>gi|269103021|ref|ZP_06155718.1| aspartyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162919|gb|EEZ41415.1| aspartyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 592

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTNGFLDIETPVLTKATPEGARDYLVPSRVHKGNFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +                  E   +  +EA  R+   D     +  + 
Sbjct: 244 VRAVTEQMITEMWKELL----------NVDLGEFPIMPFSEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +             +D    +
Sbjct: 293 VDVADIVKDVDFKVFSAPANDEKGRV 318



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 46/153 (30%), Gaps = 6/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E+ E              P   S        
Sbjct: 408 ALRLKLGEDLGLTDKSAWKPLWVVDFPMFEENEDGSLSAMHHPFTS-PLNISPEELKANP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               +  +++     E+      + +   Q   F+          +E        L  L 
Sbjct: 467 AGALSNAYDMVLNGYEVGGGSVRIHNGEMQAAVFDILGIAA----DEQRLKFGFLLDALK 522

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A G DRLVML+ G  NI +VI  P
Sbjct: 523 YGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|325262052|ref|ZP_08128790.1| aspartate--tRNA ligase [Clostridium sp. D5]
 gi|324033506|gb|EGB94783.1| aspartate--tRNA ligase [Clostridium sp. D5]
          Length = 594

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 67/191 (35%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ I +  R++  +  F+EI++  L + +P     ++            
Sbjct: 140 RRPDLQRNLMMRSQIATLTRQFLSDEGFLEIETPILGKSTPEGARDYLVPSRVHPGSFYG 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 200 LPQ------SPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQPEFTQIDMELSFVEVDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +            +         +T  EA  RY   D   T    + 
Sbjct: 254 VIDVNERLLVKLFKEVL---------DVEVALPIPRMTWQEAMDRY-GSDKPDTRFGMEL 303

Query: 192 PDRHLLYLQAQ 202
            D   +     
Sbjct: 304 VDVTEVVKGCD 314



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  I   ++  ++ I    L+E  +              P  E         
Sbjct: 414 NLRLEIARQMEILDKNEYKFAWITEFPLLEWSDEQNRFMAMHHPFTMPMEEDLQYIDSDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K++     Y      L    
Sbjct: 474 GRVRAKAYDIVLNGNEIGGGSVRIFQNDVQEKMFEVLGFTKEQ----AYEQFGFLLDAFK 529

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DR+VML+   ++I +V+  P  +
Sbjct: 530 YGVPPHAGLAYGLDRMVMLMAKEDSIRDVMAFPKVK 565


>gi|256959283|ref|ZP_05563454.1| aspartyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300860591|ref|ZP_07106678.1| aspartate--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|256949779|gb|EEU66411.1| aspartyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300849630|gb|EFK77380.1| aspartate--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|315034525|gb|EFT46457.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0027]
          Length = 589

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 72/215 (33%), Gaps = 17/215 (7%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP     +  R+ +  ++R Y   + F++I++  L + +P     ++            
Sbjct: 135 RRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQIDIETTFLTPEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +     N++    +       S                  +   R+A   ID+   + + 
Sbjct: 249 IQTYTENMLAEVMKETKGIEISVPFPRMCYDEAMARYGSDKPDTRFAMELIDVAEVVKDV 308

Query: 190 DQPDRHLLYL---QAQQAGIRVAHDDTWSDIFSRI 221
           D              +    + A D         +
Sbjct: 309 DFKVFQAALENGGHVKALNAKGAADKYSRKDMDNL 343



 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 46/146 (31%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    L E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   FE     K+    E        L  L    P   
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKE----EAQDQFGFLLDALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DRL ML+ G  NI EVI  P
Sbjct: 531 GIALGLDRLAMLLAGEENIREVIAFP 556


>gi|257068573|ref|YP_003154828.1| aspartyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559391|gb|ACU85238.1| aspartyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 609

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 66/198 (33%), Gaps = 26/198 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R+ +  + R+  ++  F+E+++ +L   +P      R 
Sbjct: 116 EARLRYRYLDLRRQGPAAAMRLRSEVNRAARDTLLDQDFVEVETPTLTRSTPEGA---RD 172

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+  G EK F  A  +R+ +     QPEFT L+
Sbjct: 173 FLVPARL--APGSWYALPQSPQLFKQLLMVGGIEKYFQLARCYRDEDFRADRQPEFTQLD 230

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    E ++     I+         +I +              IT AE+  R+ +  
Sbjct: 231 VEMSFVDQEDVIALAEEILTAVWAKGGHQITT----------PFPRITYAESMRRFGSDK 280

Query: 182 LGTTLDNPDQPDRHLLYL 199
                D            
Sbjct: 281 PDLRFDLELVEMTDYFRE 298



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P+    + +  DP       +++     E+      + D   Q+  F+         
Sbjct: 449 FTSPKPEFMDSFDTDPGAALAYAYDIVCNGNEIGGGSIRIHDQSVQQRVFQVMGI----G 504

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G+DR+V L+   ++I EVI  P
Sbjct: 505 AEEAQEKFGFLLDAFQYGAPPHGGIAFGWDRIVALLAREDSIREVIAFP 553


>gi|261366606|ref|ZP_05979489.1| aspartate--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571425|gb|EFB76960.1| aspartate--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 595

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 74/193 (38%), Gaps = 28/193 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            ++ R+ I   +R YF +N F EI++ +L   +P     ++ 
Sbjct: 127 DLRLRYRYLDLRRPSMHEPIVLRSKIMQIIRSYFTDNHFTEIETPTLIKSTPEGARDYLV 186

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
               +      + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT +
Sbjct: 187 PSRVQPGHFYALPQ------SPQLYKQILMLSGFDRYFQIARCYRDEDLRADRQPEFTQV 240

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + + +M     ++         K    + +  +  +  E +   +A +R+   
Sbjct: 241 DEEMSFVTEDDIMTVNEGLL---------KRLWKEMLGIDLVTPFERMPWNDAMSRF-GS 290

Query: 181 DLGTTLDNPDQPD 193
           D   T    +  D
Sbjct: 291 DKPDTRFGLEIQD 303



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 13/160 (8%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++  +       +  +    L E  E              P  E             
Sbjct: 417 DIARKHDLIDNDKFNFLWVVDFPLFEYSEQEGRWMAMHHPFTMPKAEDLDKIESDPGACH 476

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT 314
              +++    +EL      + DP  Q   F+     E + +              +    
Sbjct: 477 AVAYDIVLNGVELGGGSMRINDPALQDRMFKALGFTEEKARASFG--------FLMDAYK 528

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A G DR+VML+   ++I +VI  P  Q+  E
Sbjct: 529 FGAPPHGGMAYGLDRMVMLMLKKDSIRDVIAFPKVQNAGE 568


>gi|332305755|ref|YP_004433606.1| aspartyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173084|gb|AEE22338.1| aspartyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 592

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 74/206 (35%), Gaps = 23/206 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     L  R  + S++R Y   + F++I++  L   +P     ++    T       
Sbjct: 130 RRPVMSDRLKFRAKVTSAVRSYLEGDGFLDIETPILTKATPEGARDYLVPSRTHKGKFFA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++      S EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQPEFTQIDIETTFLSAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +IR               +          +T A+A  R+   D     +  + 
Sbjct: 244 VMEITEGMIRDLFMK----------MLNVDLGAFPQMTYADAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +    +        +D    +
Sbjct: 293 VDVADILKDVEFKVFSGPANDAEGRV 318



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 45/154 (29%), Gaps = 6/154 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYP 253
             L     + G  +   +        I     E   G           P   +       
Sbjct: 404 EALGALRLKVGEDLNLLEGEWKPLWVIDFPMFEEFDGQFYALHHPFTAPRDMTPEQLAAD 463

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                +  +++     EL      + D   Q   F            E        L  L
Sbjct: 464 PANALSNAYDMVLNGCELGGGSVRIHDQDMQAKVFNILGIS----DEEAEVKFGFLLDAL 519

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P  +G+A G DRLVML+TGA +I +V+  P
Sbjct: 520 KFGAPPHAGLAFGLDRLVMLMTGATSIRDVMAFP 553


>gi|6325153|ref|NP_015221.1| Msd1p [Saccharomyces cerevisiae S288c]
 gi|135101|sp|P15179|SYDM_YEAST RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|172872|gb|AAA35137.1| aspartyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|173036|gb|AAA35173.1| mitochondrial aspartyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1151223|gb|AAB68196.1| Msd1p: mitochondrial aspartyl-tRNA synthetase [Saccharomyces
           cerevisiae]
 gi|151942693|gb|EDN61039.1| mitochondrial aspartyl-tRNA synthetase [Saccharomyces cerevisiae
           YJM789]
 gi|285815437|tpg|DAA11329.1| TPA: Msd1p [Saccharomyces cerevisiae S288c]
          Length = 658

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 6/149 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +  + + + FL KR+ I   +R  F    F E+++  L + +P      R F 
Sbjct: 148 PPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNFDFTEVETPMLFKATPEG---AREFL 204

Query: 64  TELIIQDHIRKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                +    KP +  L  SP+   + L+A+G  K +  A  +R+ +     QPEFT ++
Sbjct: 205 VPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQPEFTQVD 264

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQK 150
              A  + E +MK     +       ++K
Sbjct: 265 MEMAFANSEDVMKIIEKTVSGVWSKFSKK 293



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 10/115 (8%)

Query: 237 ILDRYPAPE----SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               +P                +    + ++L    +EL      + DP  Q + FE  +
Sbjct: 516 CSTHHPFTMVKLKDYEKLEKTPEKCLGRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDIL 575

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +      +  Y +    L       P  +G A+GFDR+  ++    +I +VI  P
Sbjct: 576 KI-----DNAYELFGHLLNAFDMGTPPHAGFAIGFDRMCAMICETESIRDVIAFP 625


>gi|220906397|ref|YP_002481708.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254781729|sp|B8HXQ8|SYD_CYAP4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219863008|gb|ACL43347.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 597

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 21/190 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQ 69
            RR      L  R+ +  ++R Y   E  F+EI++  L   +P     ++          
Sbjct: 135 LRRETMAANLQLRHQVVKAMRRYLEDEQNFVEIETPVLTRSTPEGARDYLVPSRVNP--- 191

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
               +   L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   +  S 
Sbjct: 192 ---GEWFALPQSPQLFKQLLMVAGYDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSQ 248

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E++++    ++    +                      +T AEA  RY +    T     
Sbjct: 249 EEILELNEALVCHIFKQVKG---------IELPRPFPRLTYAEAMDRYGSDKPDTRFGLE 299

Query: 190 DQPDRHLLYL 199
                 L+  
Sbjct: 300 LVNVSDLMKD 309



 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 43/135 (31%), Gaps = 15/135 (11%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I+   +              +P       ++        + ++L     E+      
Sbjct: 436 LLWIVEFPMFEWNADEKRLEALHHPFTAPYPEDVQDLKTAQAQAYDLVYNGFEVGGGSLR 495

Query: 278 LLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVM 331
           +     Q+  FE      +E Q K     E +             P   GIA G DRLVM
Sbjct: 496 IYQTELQKQVFETIGLSPEEAQNKFGFLLEAFE---------YGTPPHGGIAYGLDRLVM 546

Query: 332 LVTGANNINEVIWTP 346
           L+ G  +I +VI  P
Sbjct: 547 LLAGEESIRDVIAFP 561


>gi|322434280|ref|YP_004216492.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321162007|gb|ADW67712.1| aspartyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 607

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 62/175 (35%), Gaps = 19/175 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+ +  ++R Y  ++ F+EI++  +   +P     ++            
Sbjct: 142 RRPEMQHNFRLRHEVARAIRNYLSDDGFLEIETPFMTRSTPEGARDYLVPSRVHAGEFYA 201

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K F  A  +R+ +     QPEFT ++      S E+
Sbjct: 202 LPQ------SPQIFKQILMVSGFDKYFQIARCFRDEDLRADRQPEFTQIDLETTFPSQER 255

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
           + +     +  A + AN                P      +   R+  ID     
Sbjct: 256 IFRIVEGFLTAAFKAAN-----------ITLQPPFVQMTYDEAIRHYGIDKPDMR 299



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 59/190 (31%), Gaps = 19/190 (10%)

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV----AHDDTWSDIFSRILI 223
           IT         N D              L    A + G+      A D  +  +    + 
Sbjct: 394 ITPKLGTPERWNYDPQWIYKKVGALRLELAKKFADKHGLFKQTGTAADYKFCWVTDFPMY 453

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPR--FTKRFELYACNIELCNACDELLDP 281
           E  E              P  +   +    +D        +++     EL +    +   
Sbjct: 454 EWDEEAKVWQAAHHPFTSPHEDDITSGRLVSDKGAVRALAYDIVLNGTELGSGSIRIHRK 513

Query: 282 IEQRHRF----EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
             Q   F      + ++K +           FL  L    P   GIA+G DR+VM++ GA
Sbjct: 514 DVQAEIFRSLGMSDEEQKARFG--------FFLDALEYGTPPHGGIALGLDRIVMILAGA 565

Query: 337 NNINEVIWTP 346
            ++ EVI  P
Sbjct: 566 TSLREVIAFP 575


>gi|332528585|ref|ZP_08404567.1| aspartyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332041901|gb|EGI78245.1| aspartyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 597

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 70/197 (35%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +   +R++   N FI++++  L   +P     ++        +   
Sbjct: 133 RRPYMQNNLMLRYRVAMEVRKFLDANGFIDVETPMLTKSTPEGARDYLVPSRVHDGMFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + + 
Sbjct: 193 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFLTEQD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I+   +                +SE  +   ++       ++     D    
Sbjct: 247 IRDMFQGMIKTVFQNVLG--IDLGEFPVMAYSEAMHRFGSDKPDLRVKLEFTELTDVMKD 304

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    AQ  G RV
Sbjct: 305 VDFKVFSTPAQAKGGRV 321



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 48/146 (32%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +++G+          +    + E  E     +        P        +   +    K 
Sbjct: 423 KKSGL-FEARWAPMWVVDFPMFEYDEDEQRWSAVHHPFTAPKDGHEDWMVTDPEKCIAKG 481

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     E+      +     Q   F+      K   +E        L  L    P   
Sbjct: 482 YDMVLNGWEIGGGSVRIHRADVQAKVFD----ALKIGPDEQRLKFGFLLDALQYGAPPHG 537

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR+V L+TGA +I +VI  P
Sbjct: 538 GLAFGLDRIVTLMTGAESIRDVIAFP 563


>gi|224824723|ref|ZP_03697830.1| aspartyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603216|gb|EEG09392.1| aspartyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 600

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 68/207 (32%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R+Y  +  FI+I++  L   +P     ++            
Sbjct: 131 RRPAMQKNLRLRYRVAMGVRQYLDQQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    +Q
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLDEDQ 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    ++ R                      +   ++ A+A   Y   D      +   
Sbjct: 245 IMDITEDMARQIFRDVMDVELG----------DFPRMSYADAM-HYYGSDKPDLRVSLQF 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L    +    R A D     + 
Sbjct: 294 TELTDLMKTEEFKVFRGAADLPNGRVV 320



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 43/144 (29%), Gaps = 5/144 (3%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
           AG     +     +    + E  E +     C      P P               + ++
Sbjct: 425 AGGYFVKEWRPLWVVDFPMFEYDEDDDRWTACHHPFTSPKPGHEDLMDSNPGACLARAYD 484

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           +     E+      +     Q   F       K    E        L  L    P   G+
Sbjct: 485 MVLNGWEIGGGSVRIHRAEIQEKVF----AALKITPEEQQNKFGFLLDNLKFGAPPHGGL 540

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DRLV L+ GA +I +VI  P
Sbjct: 541 AFGLDRLVTLMAGAESIRDVIAFP 564


>gi|226321078|ref|ZP_03796620.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233488|gb|EEH32227.1| aspartyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 586

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E     +    +   P  +         
Sbjct: 405 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +EL +    + +   Q+  F+    +K+K  +        FL  L 
Sbjct: 465 KKTIGEIYDLVLNGVELGSGSIRIHNKELQQRIFKIIGFQKEKSED----RFGFFLKALE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 521 YGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 99/299 (33%), Gaps = 17/299 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + ++ +F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHLIRNFLIKRKFLELETPTFVKSTPEG---ARDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +                +   R+       + +  + 
Sbjct: 245 IFKLIENMLFLIFKNCININLPKKFKKITYKKAMNKYGSDKPDTRFELELQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                      +  I++      +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 305 EFNIFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY-FTKIENNKFSG 363

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             A    T+  EL        N        +  E   +   +++ K         IDE+
Sbjct: 364 GIAKFLKTEEQELMKTYSLENNDIIFFTANNNWETACKAMGQIRIKIANDL--GLIDEN 420


>gi|170039919|ref|XP_001847765.1| aspartyl-tRNA synthetase, mitochondrial [Culex quinquefasciatus]
 gi|167863507|gb|EDS26890.1| aspartyl-tRNA synthetase, mitochondrial [Culex quinquefasciatus]
          Length = 676

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 67/182 (36%), Gaps = 19/182 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAFSTELIIQDH 71
              + +  L  R+ I   +RE+ +    FIE+++ +L + +PG       F       DH
Sbjct: 211 RSAKLQHNLRLRSQIIMKMREFMINRCGFIEVETPTLFRRTPGGAQE---FVVPTRKPDH 267

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L++   ++ F  A  +R+       QPEFT L+   +     Q
Sbjct: 268 F---YSLVQSPQQFKQMLMSGAIDRYFQVARCYRDEATRPDRQPEFTQLDLELSFTDRHQ 324

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +           + V      S+ N           +T  EA +RY   D   T    D 
Sbjct: 325 I----------MSLVEGILDASWPNQLHPLQLPFPRMTYQEAMSRY-GCDKPDTRFGLDL 373

Query: 192 PD 193
            D
Sbjct: 374 RD 375



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 10/140 (7%)

Query: 217 IFSRILIEKIEPNLGINCCTIL--DRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
           I    +    E    +          +P     L +        ++ F+L    +E+   
Sbjct: 510 IVDFPMFAANEETGQLETVHHPFTTAHPEDMDKLRSKQDLASIRSQSFDLVWNGMEIGGG 569

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLV 333
              + +   QR      +Q         +   +  L  L +  P   G A+G DR + L+
Sbjct: 570 SVRIHEAALQRMVLNDILQI-------EHSHLQHLLDALDSGCPPHGGFAIGLDRYISLI 622

Query: 334 TGANNINEVIWTPFSQSNQE 353
             A +I EVI  P + + ++
Sbjct: 623 CRAKSIREVIAFPKTINGKD 642


>gi|325690285|gb|EGD32289.1| aspartate--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 578

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 57/180 (31%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            +  AR+   D    L    +  R    L   +  +  A D     +   +      +  
Sbjct: 374 QDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIEVANALDLIDPSLLHFLWVVDWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +             +  +++     E+      + D   Q   F
Sbjct: 434 WNEDQNRYQAMHHPFTQGIFEEGQEPGQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEAMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        +  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 494 E-----LLGMSKEDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 548



 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 90/278 (32%), Gaps = 27/278 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +  + 
Sbjct: 131 RREKMTQNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRV--YK 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  + E++
Sbjct: 186 NQFYALPQSPQILKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFANEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T  + +  
Sbjct: 246 RALVEAMLKSVVKKTHGLELTED---------FPTISYEEAMSRF-GSDKPDTRFDLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
               L    +   I+ A D+        ++   +           L  Y           
Sbjct: 296 SLTDLCQANESLLIKKALDN-----QEEVMGICVPDAASAFSKKQLSHYYQEMKEFCC-S 349

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                  +  +L            E  D      RFE 
Sbjct: 350 RFASLKVENGQLV--GDLASTFEAESQD---LLARFEA 382


>gi|42527095|ref|NP_972193.1| aspartyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|62287577|sp|Q73MC2|SYD_TREDE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|41817519|gb|AAS12104.1| aspartyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 590

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     +  G+    +  ++ I    L E  E     +    +   P  +         
Sbjct: 412 AVRSKLGKDLGLLNPAEFKFAWIVDFPLFEWNEEENKWDPAHHMFSAPQEKYIATMEENP 471

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +P     ++L     E+ +    + +P  Q+  F      E E ++K     E +     
Sbjct: 472 EPVKGDLYDLVLNGYEVASGSIRIHNPELQKRIFKIVGFDESEAEKKFGFLTEAFK---- 527

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   GIA G DR+VM++ G  +I EVI  P
Sbjct: 528 -----YGAPPHGGIAPGLDRIVMIMAGETSIKEVIAFP 560



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 77/210 (36%), Gaps = 28/210 (13%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMS-LQY 51
           QI  +   N D   + R            ++ R+    ++RE+     F+EI++ + ++ 
Sbjct: 116 QIDEKTNANEDLRLKYRYLDLRSKAMQEHIMLRSKFTFAVREFLTSKDFLEIETPTFIKS 175

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G +K F  A  +R+ +  
Sbjct: 176 TPEGARDYLVPSRLYPGKFYALPQ------SPQIYKQILMVSGFDKYFQIARCYRDEDAR 229

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  S E ++     +++ A           +++N +     E I+ 
Sbjct: 230 GDRQPEFTQIDLEMSFASREDVLSLTEGMMQYAF---------KKSINVDLPKTFERISY 280

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            EA   Y   D           D   +   
Sbjct: 281 DEAIDIY-GTDKPDLRFEMKMQDAAFMAEI 309


>gi|257877238|ref|ZP_05656891.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257811404|gb|EEV40224.1| aspartyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 591

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 46/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     ++ G+       +  +      E  E              P            
Sbjct: 408 AIRNKLGKELGLIDESKFNFLWVTDWPQFEYDEEAGRYVSAHHPFTLPKESDLPLLTTDP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
              + + +++     EL      +     Q   FE     ++    E        L  L 
Sbjct: 468 SKVYAQAYDIVLNGYELGGGSLRIHTREVQEQMFEALGFSRR----EMQNQFGFLLDALD 523

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+ G  NI EVI  P
Sbjct: 524 YGFPPHGGIALGLDRLVMLLAGEENIREVIAFP 556



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 65/188 (34%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              +    ++ R     ++R +   N F++I++  L + +P     ++            
Sbjct: 135 RRPKMTNNIVMRAKTTQAIRNFLDTNDFLDIETPYLGKSTPEGARDYLVPSRIYPGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETSFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++            +              +T  EA  RY   D   T  + + 
Sbjct: 249 IQTYTEELLAKVMREVKGIEVT---------LPFPRMTYDEAMGRY-GSDKPDTRFDMEL 298

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 299 IDLSEVVK 306


>gi|255322548|ref|ZP_05363693.1| aspartyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300456|gb|EET79728.1| aspartyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 594

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 75/218 (34%), Gaps = 9/218 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
            + + +     R+    + R    +  FIE ++  L   +P     ++            
Sbjct: 143 RNEKLQNIFKMRSKAAIAARNSLDKMGFIEFETPILTRATPEGARDYLVPSRVYPGQFYA 202

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 203 LPQ------SPQLFKQLLMCSGFDKYFQIAKCFRDEDLRADRQPEFTQIDIEMSFIGQED 256

Query: 132 LMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++    N+++             F+ ++    +E       +       ID+        
Sbjct: 257 ILNMAENMLKDVFAACGYDIQIPFRRMSYKEATETYGSDKPDLRYDLKMIDVIDIFARSS 316

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                 +  + ++  I+        +IFS+  + + E 
Sbjct: 317 NEIFSKIATEPKKNRIKALKVPNGDNIFSKREMNRFEE 354



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 18/152 (11%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A+Q GI   +   +  +    +          +       +P       +    +   +
Sbjct: 423 LAEQMGIIDQNKMEFLWVLDFPMF-----EQNDDGSYSAMHHPFTMPKNIDEPDLEDILS 477

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT- 314
              ++     EL      +     Q+  F+     E ++++K            L  L+ 
Sbjct: 478 VAHDVVLNGYELGGGSVRIHKNDVQQKVFKLLGIDEAEQREKFG--------FLLDALSF 529

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA+GFDRL MLV   ++I +VI  P
Sbjct: 530 GAPPHGGIAIGFDRLNMLVNKTSSIRDVIAFP 561


>gi|332519166|ref|ZP_08395633.1| aspartyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332045014|gb|EGI81207.1| aspartyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 582

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 75/221 (33%), Gaps = 14/221 (6%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R  +  ++R Y   + FIE+++  L   +P      R F     +    
Sbjct: 133 RRNPVKESLIFRAKVTQAVRNYLSNDGFIEVETPYLIKSTPEG---ARDFVVPSRMN--- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E 
Sbjct: 187 EGEFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + R   +  N             + +   +   +       ++ G   +    
Sbjct: 247 ILNVFEGLTRHLLKEVNG--VEIDKFPRMLYDDAMRLYGNDKPDIRFGMEFGELNEVTQH 304

Query: 192 PDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLG 231
            +  +        GI V   +        +++     P +G
Sbjct: 305 KEFGVFNNAELVVGIAVPGGNSYTRKEIDKLIDWVKRPQVG 345



 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 45/157 (28%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R         +    L+E  E     +        P P          
Sbjct: 404 ALRMELAERLGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQIELLDTKP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q    +     E + K +            +
Sbjct: 464 GEVKANAYDLVLNGNEIGGGSIRIHDKATQAIMLKHLGFSEKEAKAQFG--------FLM 515

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   G+A G DRLV ++ G   I + I  P
Sbjct: 516 DAFEYGAPPHGGLAFGLDRLVAILGGQETIRDFIAFP 552


>gi|324996307|gb|EGC28215.1| aspartate--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327490475|gb|EGF22257.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 584

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIDVS---------LPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTELVKGVDFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 46/156 (29%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +S        
Sbjct: 402 ALRVRLAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                  +++     EL      +     Q   F       K +        E F   L 
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERMF-------KALGFSAQEAAEQFGFLLE 514

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 515 AMDYGFPPHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|323331212|gb|EGA72630.1| Msd1p [Saccharomyces cerevisiae AWRI796]
          Length = 662

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 6/149 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +  + + + FL KR+ I   +R  F    F E+++  L + +P      R F 
Sbjct: 148 PPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFNNFDFTEVETPMLFKATPEG---AREFL 204

Query: 64  TELIIQDHIRKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                +    KP +  L  SP+   + L+A+G  K +  A  +R+ +     QPEFT ++
Sbjct: 205 VPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLRADRQPEFTQVD 264

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQK 150
              A  + E +MK     +       ++K
Sbjct: 265 MEMAFANSEDVMKIIEKTVSGVWSKFSKK 293



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 10/115 (8%)

Query: 237 ILDRYPAPE----SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
               +P                +    + ++L    +EL      + DP  Q + FE  +
Sbjct: 516 CSTHHPFTMVKLKDYEKLEKTPEKCLGRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDIL 575

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +      +  Y +    L       P  +G A+GFDR+  ++    +I +VI  P
Sbjct: 576 KI-----DNAYELFGHLLNAFDMGTPPHAGFAIGFDRMCAMICETESIRDVIAFP 625


>gi|324989681|gb|EGC21625.1| aspartate--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 584

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIDVS---------LPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTELVKGVDFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 43/148 (29%), Gaps = 9/148 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +       +  +    + E  E              P  +S               
Sbjct: 409 KELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAVA 468

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEMPQ 318
           +++     EL      +     Q   F      K   +   E        L  +    P 
Sbjct: 469 YDIVLNGYELGGGSLRINQKDLQERMF------KALGFSPQEATEQFGFLLEAMDYGFPP 522

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A+G DR VML+ G  NI EVI  P
Sbjct: 523 HGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|310793039|gb|EFQ28500.1| asparaginyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 583

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 46/354 (12%), Positives = 100/354 (28%), Gaps = 45/354 (12%)

Query: 2   HQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
             + ++    R  +      +  R  ++ +  + + + +  ++   +L  +   E     
Sbjct: 260 QMLDNRHLVLRGDNAS--AIMKIRAAVEWAFCKTYKDLKITKVSPPALVQTQV-EGGATL 316

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
           FS       +  +  YL  S +   + +L +    ++C   ++R        H  E+T +
Sbjct: 317 FSVP-----YYDEAAYLTQSSQLYLETVLPS-LGSVYCIEKSFRAERSLTRRHLAEYTHV 370

Query: 121 EWYRAHESYEQLMKDCMN-IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           E       +  L++     + R    V   +  +      NP  +           +Y +
Sbjct: 371 EAELDFIEFPDLLEHLEEVMCRVIDNVLADEEIAAFIKELNPDFKKPVRPF--MRMKYTD 428

Query: 180 -IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            ID     D P                        + D  +     K+     IN    L
Sbjct: 429 AIDWLNAQDPPILN--------------EDGEPHKFGDDIAEAAERKM--TDAINKPIFL 472

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
             +P    +      P DPR T+  +     +                 R E   +    
Sbjct: 473 THFPTEIKAFYMKKDPNDPRVTESVDCLMPGVGEIVGGS---------MRMEGYEELMAA 523

Query: 298 IYNETYPIDEDFL----ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              E  P  +D+               G  +G +R +  +   + +      P 
Sbjct: 524 YDREGIP-SKDYYWYTDQRKYGTSPHGGYGLGLERFLAWLANQHTVRTTCLYPR 576


>gi|197303676|ref|ZP_03168713.1| hypothetical protein RUMLAC_02403 [Ruminococcus lactaris ATCC
           29176]
 gi|197297196|gb|EDY31759.1| hypothetical protein RUMLAC_02403 [Ruminococcus lactaris ATCC
           29176]
          Length = 596

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 65/190 (34%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L  ++ + +  R+YF E  F+E+++  L + +P     ++            
Sbjct: 141 RRPDLQRNLKMKSQVMTLTRQYFAEEGFLEVETPMLGKTTPEGARDYLVPSRVHPGSFYG 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLYKQLLMCSGVDRYIQIARCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      ++                +       + +T  EA  R+   D        + 
Sbjct: 255 VIDVNERYLKKLFREVL---------DVEVQLPIQRMTWQEAMDRF-GSDKPDLRFGMEL 304

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 305 TDVSEVVKDC 314



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 49/156 (31%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q  +   ++  +  I    L+E  E              P  E         
Sbjct: 415 ALRIELAKQLELLDKNEYRFVWITEFPLLEWSEEQNRFVAMHHPFTMPMEEDLQYIESDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   F            + Y      L    
Sbjct: 475 GRVRAKAYDIVLNGNEIGGGSVRIFQDDIQEKMFHALG----FTDEQAYSQFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLVMLMAKQDSIRDVIAFPKIK 566


>gi|149191827|ref|ZP_01870064.1| aspartyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834345|gb|EDL51345.1| aspartyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 592

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 71/206 (34%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S +Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSADQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++R            +Q +      +   +  +EA  R+   D     +  + 
Sbjct: 244 VREVTEKMVRDM----------WQELLNVDLGQFPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLLKDVEFKVFSGPANDEKGRV 318



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 14/149 (9%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  +  W+ ++        E + G ++        P   +A           +  +
Sbjct: 415 KDLELTDESKWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGMTAEELKANPAAANSNAY 474

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           ++     E+      + +   Q   FE       ++++K            L  L    P
Sbjct: 475 DMVLNGYEVGGGSVRIHNAEMQAAVFEILGIDAEEQREKFG--------FLLDALKFGTP 526

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +G+A G DRLVML+ G  NI +VI  P
Sbjct: 527 PHAGLAFGLDRLVMLLCGTENIRDVIAFP 555


>gi|332364065|gb|EGJ41842.1| aspartate--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 584

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIDVS---------LPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTELVKGVDFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 43/148 (29%), Gaps = 9/148 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +       +  +    + E  E              P  +S               
Sbjct: 409 KELDLIDPDTFNYLWVVGWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAVA 468

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEMPQ 318
           +++     EL      +     Q   F      K   +   E        L  +    P 
Sbjct: 469 YDIVLNGYELGGGSLRINQKDLQERMF------KALGFSPQEATEQFGFLLEAMDYGFPP 522

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A+G DR VML+ G  NI EVI  P
Sbjct: 523 HGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|304372946|ref|YP_003856155.1| aspartyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309137|gb|ADM21617.1| aspartyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|330723454|gb|AEC45824.1| aspartyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 573

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 81/267 (30%), Gaps = 12/267 (4%)

Query: 94  EEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS 153
            +     A+   N +     +     L         ++       +++  A         
Sbjct: 288 FDNFLLAANDLNNAQDSLFEKNTTKTLFLEDILIDKKEYKIFSEKVVQNKANRLLYVHI- 346

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR------HLLYLQAQQAGIR 207
                 +   +       + + +  N   GT     D+ ++       L    AQ   + 
Sbjct: 347 QDWQIVHYSFKLNSFEAIKTYVKKHNFKTGTLFIVNDEYEKVCQGLGALRVAVAQHYNLI 406

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                 +  + +  + E  E    ++        P  E+             + ++L   
Sbjct: 407 KQDQYKFLWVVNWPMFELDEETQKLSAAHHPFTMPTFETLDLLKTDPLKVRAQAYDLVLN 466

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
            +E+      +     Q   F+     K++  N+        L      +P   GIA G 
Sbjct: 467 GVEVAGGSIRISSKQIQEQIFDTIGLSKEQANNQ----FGFLLKAFSYGVPPHGGIAFGL 522

Query: 327 DRLVMLVTGANNINEVIWTPFSQSNQE 353
           DRL+M++T + +I +VI  P +   Q+
Sbjct: 523 DRLLMILTNSESIRDVIAFPVNSKGQD 549



 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 75/237 (31%), Gaps = 20/237 (8%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  ++ RN +   +R +F E  FIEI++  L   +P      R+F      ++H
Sbjct: 130 LRRKPLRNNIIFRNKLFYYIRSFFFEKNFIEIETPILSKSTPEG---ARSFLVPSRRKNH 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G EK F  A  +R+ +     Q EF  L+   A  + E 
Sbjct: 187 F---FSLPQSPQLYKQLLMVSGFEKYFQIARVFRDEDLRKDRQYEFVQLDVELAFPTIES 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K    +I                      +    +   +A  ++ +       DN   
Sbjct: 244 IRKAVEELIVYLFNKL----------KIEISTPFAILEYDQAIDKFGSDKPDLRFDNFLL 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
               L   Q               DI       KI     +        Y   +   
Sbjct: 294 AANDLNNAQDSLFEKNTTKTLFLEDILIDKKEYKIFSEKVVQNKANRLLYVHIQDWQ 350


>gi|206901021|ref|YP_002250688.1| aspartyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|238064705|sp|B5YDT0|SYD_DICT6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|206740124|gb|ACI19182.1| aspartyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 593

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 79/213 (37%), Gaps = 32/213 (15%)

Query: 3   QIPSQPWWNRD----FHYRRRPFLLKRNMIQS----------SLREYFVENQFIEIDSMS 48
            +P   W N++       + R   L+R+ +QS          ++R +  +N FIEI++  
Sbjct: 109 PLPFNLWSNKEIDETVRLKYRYLDLRRDKMQSNIIFRHNFILAIRNFLAQNGFIEIETPY 168

Query: 49  L-QYSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
           L   +P      R F     +Q       Y L  SP+   + L+ +G ++ F  A  +R+
Sbjct: 169 LIVSTPEGA---RDFIIPSRLQ---PGKFYALPQSPQLFKQILMVSGFDRYFQIARCFRD 222

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
            +     QPEFT L+   +    E +     N+ +   +           +N +      
Sbjct: 223 EDLRADRQPEFTQLDMEMSFVEIEDIFNIIENLFKTTLKNL---------MNIDITVPFP 273

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
            IT  EA   Y   D      +    D   ++ 
Sbjct: 274 RITYEEAMNTY-GSDKPDLRYDLKISDVTEIFK 305



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 53/161 (32%), Gaps = 15/161 (9%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A+   I       +  +    L E  E    I         P  E          
Sbjct: 407 LRLEIAELFNIEKKEGLYFLWVTDFPLFEYDEEERRIVAEHHPFTSPKDEDIPLLDTDPL 466

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDF 309
               K ++L     EL +    +     Q   F       ++ ++K     E +      
Sbjct: 467 KVKAKCYDLVLNGTELGSGSIRIHKKEIQEKVFNILNITPEDAKKKFGFLLEAFE----- 521

Query: 310 LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                  P   GIA+G DR++ ++T +N++ +VI  P +QS
Sbjct: 522 ----YGAPPHGGIALGIDRIIAILTKSNSLRDVIAFPKTQS 558


>gi|326560762|gb|EGE11129.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326566601|gb|EGE16744.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
 gi|326569626|gb|EGE19678.1| aspartyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326570845|gb|EGE20869.1| aspartyl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326574392|gb|EGE24334.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
 gi|326576426|gb|EGE26335.1| aspartyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 597

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 71/207 (34%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  +  R    S++R Y  ++ F+++++  L   +P     ++    T       
Sbjct: 133 RRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLVPSRTRQGNFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 193 LPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLSDEE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F+ +    F     +T A+A   YA+ D          
Sbjct: 247 IMDITE----------GLTKNLFKTMLDVEFDTFPRMTYADAMRDYAS-DKPDLRIPLKL 295

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   +    +         D    + 
Sbjct: 296 IDVADIMQHVEFKVFSGPAQDPKGRVV 322



 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S        +   +
Sbjct: 421 KIGTDLNLFTCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTRPKGSVEELKQSPETALS 478

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
             +++     E+      +     Q   F+     K+    E     +  +  L    P 
Sbjct: 479 IAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKE----EAELKFKFLMDALRFGAPP 534

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             G+A G DRL+ML+ GA++I +VI  P +++
Sbjct: 535 HGGLAFGLDRLIMLMVGASSIRDVIAFPKTKT 566


>gi|326559250|gb|EGE09681.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 598

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 71/207 (34%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  +  R    S++R Y  ++ F+++++  L   +P     ++    T       
Sbjct: 134 RRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLVPSRTRQGNFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 194 LPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLSDEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F+ +    F     +T A+A   YA+ D          
Sbjct: 248 IMDITE----------GLTKNLFKTMLDVEFDTFPRMTYADAMRDYAS-DKPDLRIPLKL 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   +    +         D    + 
Sbjct: 297 IDVADIMQHVEFKVFSGPAQDPKGRVV 323



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           +++     E+      +     Q   F+     K+    E     +  +  L    P   
Sbjct: 482 YDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKE----EAELKFKFLMDALRFGAPPHG 537

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           G+A G DRL+ML+ GA++I +VI  P +++
Sbjct: 538 GLAFGLDRLIMLMVGASSIRDVIAFPKTKT 567


>gi|167760781|ref|ZP_02432908.1| hypothetical protein CLOSCI_03166 [Clostridium scindens ATCC 35704]
 gi|167661668|gb|EDS05798.1| hypothetical protein CLOSCI_03166 [Clostridium scindens ATCC 35704]
          Length = 757

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 68/189 (35%), Gaps = 18/189 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
            + +    L+ R+ I   LR    E  F+EI +  L   SP      R F          
Sbjct: 194 RNPKNHDNLVMRSKIIRHLRNKMEEKDFLEIQTPILTASSPEG---ARDFLVPSRKH--- 247

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G +K F  A  +R+ +      P EF  L++  A  + E
Sbjct: 248 PGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMAFATQE 307

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +++  C ++I       + K  + +            IT A+A   Y   D     +   
Sbjct: 308 EVLNICEDVIYDTFVTFSDKKVTEK--------PFRRITYADAMMTY-GSDKPDLRNPLL 358

Query: 191 QPDRHLLYL 199
             D    + 
Sbjct: 359 ICDLTAFFA 367



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 15/179 (8%)

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF--SRILIEKIEPNLGINCCTILD 239
                ++ ++    +    A++  + +  DD +   F     + E  E            
Sbjct: 453 CDDKKNDAEKKAGLIRTWLAKKENLDLIRDDAFEFCFVVDFPMYEIDEETGETIFTHNPF 512

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
             P                  +++L    IEL +      D    +  FE         Y
Sbjct: 513 SMPQGGMDALLGKDPTEVLAYQYDLVCNGIELASGAVRNHDIDIMKKAFEI------AGY 566

Query: 300 NETYPIDEDFLACLT-----EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           +E   + E F   L        P  +G+A G DR+VML+T    I +VI  P + + Q+
Sbjct: 567 DE-QELKERF-NALYTAFQYGAPPHAGMAPGVDRMVMLLTDEEKILDVIAFPLNGNAQD 623


>gi|88811080|ref|ZP_01126336.1| aspartyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88791619|gb|EAR22730.1| aspartyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 595

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 66/207 (31%), Gaps = 21/207 (10%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQD 70
            RR+     L  R  +   LR Y   + F+++++  L   +P      +           
Sbjct: 130 LRRQAMQQQLRTRARVAGVLRRYLDRHGFVDVETPMLTRATPEGARDFLVPSRLHQGSFY 189

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +     +R+ +     QPEFT L+   +     
Sbjct: 190 ALPQ------SPQLFKQLLMISGLDRYYQIVRCFRDEDLRADRQPEFTQLDIETSFLDES 243

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M     +IR                          ++ AEA  R+  ID        +
Sbjct: 244 AIMALMEGMIRELFREVLAVELP---------EPFPRMSYAEALQRF-GIDRPDLRIPLE 293

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +   L    +        +D    +
Sbjct: 294 LVEVADLMAAVEFKVFAGPANDPKGRV 320



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 6/157 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+ V        +    + E  E +            P            
Sbjct: 410 ALRIKLGHELGL-VEPGWRPLWVIDFPMFEYDETDRRFYALHHPFTAPRMSDPEQLRDDP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
               ++ ++L     EL      +  P  Q   F+           E        L  L 
Sbjct: 469 QRLLSRAYDLVLNGTELGGGSVRIHRPEMQYAVFD----LLGIGAEEAREKFGFLLEALE 524

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              P   GIA G DR++ML+TG  +I EV+  P +Q+
Sbjct: 525 YGAPPHGGIAFGLDRMIMLLTGVGSIREVMAFPKTQT 561


>gi|304407554|ref|ZP_07389206.1| aspartyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343505|gb|EFM09347.1| aspartyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 602

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 72/237 (30%), Gaps = 17/237 (7%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +        +  +L R+      R++     F+++++  L   +P     ++     
Sbjct: 128 KHRYLDLRRPEMQRTMLLRSKASKVFRDFLDGEGFLDVETPILTKSTPEGARDYLVPSRV 187

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   
Sbjct: 188 HAEEFFALPQ------SPQIFKQLLMVGGLERYYQIARCFRDEDLRADRQPEFTQVDIET 241

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +  S +QL+     ++                         + IT AEA  +Y +     
Sbjct: 242 SFLSQDQLLAMMEQLMARVFRETIGYEIP---------LPFQRITYAEAMDKYGSDKPDL 292

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                 +    ++     +    VA         +             +      RY
Sbjct: 293 RFGLEIKNITDIVANSDVKVFASVAASGGEVKALNAKGCASWSRKELDDLQPFAARY 349



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 49/160 (30%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L     +  G+       +  +    L+E  E              P  E         
Sbjct: 408 NLRLKLGRDLGLIDESQYKFLWVVDFPLLEWDEDAKRYVAMHHPFTRPNEEDLELLATDP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     E+      +     Q   F+      ++     +      L    
Sbjct: 468 GKVRAQAYDIVLNGYEVGGGSMRIYKRDVQELMFKTLGFSMEQ----AHEQFGFLLDAFE 523

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DRLVML+TG  N+ E I  P + S  +
Sbjct: 524 YGTPPHGGIAFGLDRLVMLLTGRTNLRETIAFPKTASATD 563


>gi|229545447|ref|ZP_04434172.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256853485|ref|ZP_05558855.1| aspartyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|307295914|ref|ZP_07575746.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|229309363|gb|EEN75350.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256711944|gb|EEU26982.1| aspartyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|306496245|gb|EFM65824.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|315028896|gb|EFT40828.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 589

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 46/146 (31%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    L E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   FE     K+    E        L  L    P   
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKE----EAQDQFGFLLDALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DRL ML+ G  NI EVI  P
Sbjct: 531 GIALGLDRLAMLLAGEENIREVIAFP 556



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 21/178 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP     +  R+ +  ++R Y   + F++I++  L + +P     ++            
Sbjct: 135 RRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQIDIETTFLTPEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           +     N++    +       S              ++  EA ARY +    T     
Sbjct: 249 IQTYTENMLAEVMKETKGIEIS---------VPFPRMSYDEAMARYGSDKPDTRFAME 297


>gi|260812197|ref|XP_002600807.1| hypothetical protein BRAFLDRAFT_229393 [Branchiostoma floridae]
 gi|229286097|gb|EEN56819.1| hypothetical protein BRAFLDRAFT_229393 [Branchiostoma floridae]
          Length = 373

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 87/299 (29%), Gaps = 32/299 (10%)

Query: 11  NRDFHYRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTEL 66
                 R       L  R+   S++ ++F +  +IE+ +  +  +       +  F  E 
Sbjct: 95  FPHLRARTNSFAALLRIRSQAASAIHKFFQDEGYIEVHTPVISSNDCEGAGEL--FQVEQ 152

Query: 67  IIQDH-------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
           I QD           P +L  S +    +++A+   +++ F   +R     G  H  EF 
Sbjct: 153 ISQDSGKDTKHFFDVPAFLTVSGQLQL-EVMASALSRVYVFGPTFRAERSLGRRHLSEFY 211

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           M+E   A     Q  +D M +I    +   ++I +    + + F +       E   +  
Sbjct: 212 MVEAELAFT---QQQEDVMEVIEMMVKQPTEQILALCPEDLHLFYKFVSPGHREVVEKIL 268

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
                       +           +          W     +     +  + G      +
Sbjct: 269 -------TSRFIRMTYTEAIQILTKNSENFQFKPEWGHDLQKEHERHLVRHCGSVPV-FV 320

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
             +P            D +    F+L    +       EL     +  R E       +
Sbjct: 321 TDFPKELKPFYARDNDDDKTVAAFDLLVPEV------GELFGGSLREERLEILQDRLDR 373


>gi|15606775|ref|NP_214155.1| aspartyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|3915067|sp|O67589|SYD_AQUAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2984003|gb|AAC07548.1| aspartyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 603

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 69/209 (33%), Gaps = 17/209 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+ +    R +F +  FIEI++  L   +P      R F     +    
Sbjct: 141 RRESMKNNLIFRHRVYQITRNFFTKEGFIEIETPFLTKSTPEG---ARDFLVPSRLH--- 194

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG ++ F     +R+ +     QPEFT +++  +  S E+
Sbjct: 195 PGKFYALPQSPQLFKQILMIAGFDRYFQIVKCFRDEDLRADRQPEFTQIDYEMSFVSEEE 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                 +  E I+  EA  +Y              
Sbjct: 255 VMDVAERLIATLFKELLGVELK---------TPFERISYREAMEKYGTDKPDRRFGLELI 305

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
               +    A +    V          + 
Sbjct: 306 ELTDIFKNTAFKVFKSVVEAGGIIKAINF 334



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 42/158 (26%), Gaps = 17/158 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES------------ALA 249
           ++  +          I    L+E  E              P  E+               
Sbjct: 420 KKYKLIDESKWDVFWIVDFPLMEWDEEEERFVSLHHPFTMPREENIPKLKEALEEEDLEK 479

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                     + +++     E+      +     Q   F    +       E        
Sbjct: 480 KKEIVHSVRARAYDMVLNGEEIGGGSIRIHRRDIQEVVF----KLLGIGEVEAQEKFGFL 535

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L  L    P   G+A G DR+V L+ G ++I + I  P
Sbjct: 536 LEALKYGAPPHGGLAFGLDRVVALMLGLDSIRDTIAFP 573


>gi|332365464|gb|EGJ43225.1| aspartate--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 584

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 73/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +                      +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIDVE---------LPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTELVKGVDFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 42/148 (28%), Gaps = 9/148 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +       +  +    + E  E              P  +S               
Sbjct: 409 KELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAVA 468

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACL-TEMPQ 318
           +++     EL      +     Q   F      K       E        L  +    P 
Sbjct: 469 YDIVLNGYELGGGSLRINQKDLQERMF------KALGFSNQEATEQFGFLLEAMDYGFPP 522

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A+G DR VML+ G  NI EVI  P
Sbjct: 523 HGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|332701713|ref|ZP_08421801.1| aspartyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332551862|gb|EGJ48906.1| aspartyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 609

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 68/188 (36%), Gaps = 21/188 (11%)

Query: 5   PSQPWWNRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETH 58
           P++    +  +   RRP     ++ R+    ++R Y   + F+EI++  L   +P     
Sbjct: 140 PTEQLKLKYRYLDLRRPKMARNMILRHKTAQAVRTYLDRHGFLEIETPVLTKSTPEG--- 196

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
            R F     +     +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT
Sbjct: 197 ARDFLVPSRLN--QGEFFALPQSPQLFKQLLMVAGLERYYQIVRCFRDEDLRADRQPEFT 254

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++         Q+M     +I    +            +    S    ++  EA   Y 
Sbjct: 255 QIDMELTFVDEAQVMDIAEGMIHTVFKQVL---------DVELPSPFPRMSHFEAMRDY- 304

Query: 179 NIDLGTTL 186
            +D     
Sbjct: 305 GVDKPDIR 312



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 9/124 (7%)

Query: 228 PNLGINCCTILDRYP--APESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIE 283
                        +P   P+     +  +DP    ++ +++     E+      +     
Sbjct: 452 EYDADEKRWAAMHHPFTQPQLETLPLMDSDPGKVLSRAYDIVLNGYEIGGGSIRIHTREM 511

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q   F+           E        L  +    P   GIA G DR++ML+TGA +I +V
Sbjct: 512 QARMFQALGI----GAEEAEAKFGFMLQAMEHGAPPHGGIAFGLDRIIMLMTGAPSIRDV 567

Query: 343 IWTP 346
           I  P
Sbjct: 568 IAFP 571


>gi|327458419|gb|EGF04775.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327471754|gb|EGF17195.1| aspartate--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 584

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIDVS---------LPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTELVKGVDFKVFSEAPVVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 46/156 (29%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +S        
Sbjct: 402 ALRVRLAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                  +++     EL      +     Q   F       K +        E F   L 
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERMF-------KALGFSAQEAAEQFGFLLE 514

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 515 AMDYGFPPHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|283769648|ref|ZP_06342544.1| aspartate--tRNA ligase [Bulleidia extructa W1219]
 gi|283103916|gb|EFC05302.1| aspartate--tRNA ligase [Bulleidia extructa W1219]
          Length = 582

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 72/196 (36%), Gaps = 22/196 (11%)

Query: 18  RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP L K    R  ++S+ R    E  F+EID+ +L   +P     ++           +
Sbjct: 128 RRPVLQKNLWLRAKVKSAARRSLEEQGFLEIDTPTLARSTPEGARDYLVPSRI------Y 181

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             K   L  SP+   +  + AG +K +  A  +R+ +     QPEF  ++   +    E 
Sbjct: 182 PGKFWALPQSPQIYKQLCMIAGLDKYYQIARCYRDEDLRADRQPEFNQIDIEMSFADEED 241

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++         K    +       +  E I   ++  RY   D        + 
Sbjct: 242 IFTVVEKLM---------KAIWKETKEIELKTPFERIPYLDSLDRY-GSDKPDLRFGNEI 291

Query: 192 PDRHLLYLQAQQAGIR 207
            +   ++ +++  G +
Sbjct: 292 QNMKKIFEKSEFVGFQ 307



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 54/166 (32%), Gaps = 26/166 (15%)

Query: 195 HLLYLQAQQAG-IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP----APESALA 249
            L    A++   I    +  ++ +    + E  E         +   +P      +    
Sbjct: 403 ALRVRLAKELNLIPEGENYHFAWVTDFPMFEYSEEE----KRWVATHHPFTAIREKDIPY 458

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETY 303
            +        + ++L     EL +    +     Q   FE      ++ +EK        
Sbjct: 459 LVSDPQRVLARAYDLVLNGYELLSGSIRIHSQEVQEKVFESIGLTFEQAKEKFG------ 512

Query: 304 PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                FL       P   G+ +G +RL+M +   +NI +V+  P +
Sbjct: 513 ----FFLEAFQYGAPPHGGVGIGLERLIMCLAHTDNIRDVVAFPTT 554


>gi|255975492|ref|ZP_05426078.1| aspartyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256619444|ref|ZP_05476290.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256762899|ref|ZP_05503479.1| aspartyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|257079350|ref|ZP_05573711.1| aspartyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257082210|ref|ZP_05576571.1| aspartyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257087175|ref|ZP_05581536.1| aspartyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|294779748|ref|ZP_06745135.1| aspartate--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307268143|ref|ZP_07549530.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307275909|ref|ZP_07557042.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307277692|ref|ZP_07558778.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307287885|ref|ZP_07567918.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|312900883|ref|ZP_07760177.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|255968364|gb|EET98986.1| aspartyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256598971|gb|EEU18147.1| aspartyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256684150|gb|EEU23845.1| aspartyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256987380|gb|EEU74682.1| aspartyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|256990240|gb|EEU77542.1| aspartyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256995205|gb|EEU82507.1| aspartyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|294453122|gb|EFG21537.1| aspartate--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295113235|emb|CBL31872.1| aspartyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|306501030|gb|EFM70337.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306505571|gb|EFM74755.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306507239|gb|EFM76376.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306515533|gb|EFM84061.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|311291982|gb|EFQ70538.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315025975|gb|EFT37907.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2137]
 gi|315033287|gb|EFT45219.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315143400|gb|EFT87416.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315149219|gb|EFT93235.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0012]
 gi|315161366|gb|EFU05383.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315163663|gb|EFU07680.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315167505|gb|EFU11522.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|323481106|gb|ADX80545.1| aspartyl-tRNA synthetase [Enterococcus faecalis 62]
 gi|327535485|gb|AEA94319.1| aspartate--tRNA ligase [Enterococcus faecalis OG1RF]
 gi|329568728|gb|EGG50528.1| aspartate--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 589

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 46/146 (31%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    L E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   FE     K+    E        L  L    P   
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKE----EAQDQFGFLLDALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DRL ML+ G  NI EVI  P
Sbjct: 531 GIALGLDRLAMLLAGEENIREVIAFP 556



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 21/178 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP     +  R+ +  ++R Y   + F++I++  L + +P     ++            
Sbjct: 135 RRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQIDIETTFLTPEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           +     N++    +       S              ++  EA ARY +    T     
Sbjct: 249 IQTYTENMLAEVMKETKGIEIS---------VPFPRMSYDEAMARYGSDKPDTRFAME 297


>gi|167746644|ref|ZP_02418771.1| hypothetical protein ANACAC_01355 [Anaerostipes caccae DSM 14662]
 gi|317471472|ref|ZP_07930824.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|167653604|gb|EDR97733.1| hypothetical protein ANACAC_01355 [Anaerostipes caccae DSM 14662]
 gi|316901087|gb|EFV23049.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 599

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 71/206 (34%), Gaps = 12/206 (5%)

Query: 18  RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP L K    R+ +  + R++  E  F+EI++  L + +P     ++            
Sbjct: 141 RRPNLQKNLLVRSQVTKAARDFLAEEGFLEIETPILGKSTPEGARDYLVPSRVHPGNFYG 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMCSGVDRYYQIAKCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++   +                    +     +   R+    +  +    D 
Sbjct: 255 VIDVNERLLKKVFKEVLDVDVQIPMKRLTYQEAMDRFGSDKPDTRFGMELINVSETVKDC 314

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
                         +R  + +   D+
Sbjct: 315 DFMVFKGALENGGSVRGLNAEGLGDL 340



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 61/198 (30%), Gaps = 19/198 (9%)

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRI 221
           F + E +T      R    DL     + D     +L     + G +    D     F  +
Sbjct: 378 FMKEEEMTALIDAMRGKPGDLLLFAADKDSVVYDVLGNLRLEIGKKYEMIDESLYNFLWV 437

Query: 222 LIE----KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
                    E              P  E              K +++     EL      
Sbjct: 438 TEFPLLEWNEEQNRYTAMHHPFTMPMEEDLEYIETEPGRVRAKAYDIVLNGTELGGGSVR 497

Query: 278 LLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVM 331
           +     Q+  F      E++  E+     E +            +P  +G+A G DRLVM
Sbjct: 498 IHRNDIQKAMFKALGFSEEDANERFGFLLEAFQ---------YGVPPHAGLAYGLDRLVM 548

Query: 332 LVTGANNINEVIWTPFSQ 349
            +TG ++I +VI  P  +
Sbjct: 549 WMTGEDSIRDVIAFPKVK 566


>gi|125719049|ref|YP_001036182.1| aspartyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125498966|gb|ABN45632.1| Aspartyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 584

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEILENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIDVS---------LPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTELVKGVDFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 46/156 (29%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +S        
Sbjct: 402 ALRVRLAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                  +++     EL      +     Q   F       K +        E F   L 
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERIF-------KALGFSAQEATEQFGFLLE 514

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 515 AMDYGFPPHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|75906472|ref|YP_320768.1| aspartyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|97196512|sp|Q3MGL3|SYD_ANAVT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|75700197|gb|ABA19873.1| aspartyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 614

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 71/207 (34%), Gaps = 16/207 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
              R    +  R+ +  ++R Y  +   FIE+++  L   +P      R +     +   
Sbjct: 155 RRDRMARNIQLRHQVVKAMRRYLEDVEGFIEVETPILTRSTPEGA---RDYVLPSRVN-- 209

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E+
Sbjct: 210 PGEWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSEEE 269

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +                      +T AEA  RY      T  D    
Sbjct: 270 IIQLNEKLVSYIFKTVKGVELP---------LPFPRLTYAEAMERYGCDKPDTRYDLQLV 320

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
               ++     +       +     I 
Sbjct: 321 NVSDVMKDSGFKVFRDAVANGGIVKIL 347



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 49/158 (31%), Gaps = 19/158 (12%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+          +    + E       +        +P       +++  
Sbjct: 436 RLRQAIAKEFGLIDPDKINLLWVVDFPMFEWNADEKRLEAL----HHPFTAPHPDDLHDL 491

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                + ++L     E+      +     Q   FE      +E Q K     E +     
Sbjct: 492 KTARAQAYDLVFNGFEVGGGSRRIYQREVQEQVFETIGLSPEEAQNKFGFLLEAFE---- 547

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   GIA G DRLVML  G  +I +VI  P
Sbjct: 548 -----YGTPPHGGIAYGLDRLVMLFAGEESIRDVIAFP 580


>gi|325686765|gb|EGD28791.1| aspartate--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 584

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIEVS---------LPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTELVKGVDFKVFSEAPAVKSIVVKNAADKYSRKDIDKLTEQ 340



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 46/156 (29%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +S        
Sbjct: 402 ALRVRLAKELDLIDQDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                  +++     EL      +     Q   F       K +        E F   L 
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERMF-------KALGFSAQEAAEQFGFLLE 514

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 515 AMDYGFPPHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|196228956|ref|ZP_03127822.1| aspartyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196227237|gb|EDY21741.1| aspartyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 609

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 81/240 (33%), Gaps = 21/240 (8%)

Query: 3   QIP-SQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ- 50
             P   P  N D     R            L  R+ I  + R+Y  +  F+EI++  L  
Sbjct: 126 PFPLDDPKVNEDLRLEYRYLDLRTDHMQRNLKLRHRIVKATRDYLDDAGFLEIETPVLSN 185

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
            +P      R F     +        Y L  +P+   + L  AG EK F  A  +R+ + 
Sbjct: 186 PTPEG---ARDFLVPSRLN---PGTFYALPQAPQQYKQLLQVAGLEKYFQIARCFRDEDL 239

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
               QPEFT ++   +  +  ++      +++   + A                      
Sbjct: 240 RADRQPEFTQIDVEASFITDVEIQTLIEGMLKRIFKEARGVDIPTPFPRMTYADAMNRFG 299

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG-IRVAHDDTWSDIFSRILIEKIEP 228
             +   R+  ++L    D   +    +    A   G I+  +    + + S+  ++K E 
Sbjct: 300 SDKPDLRF-GLELVDLADIFKESGFKVFRSVADSGGVIKALNAKGAAALLSKEQLKKWEE 358



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 40/121 (33%), Gaps = 5/121 (4%)

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E N  +       R  A +                +++    +EL      + +   Q  
Sbjct: 460 EDNHWVAVHHPFTRPKAEDMPALEAGEYAKVRAVAYDVVLNGVELGGGSIRIHEKDLQTK 519

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FE           E        L   +   P   GIA+G DRLVML  GA +I EVI  
Sbjct: 520 MFEVLGV----GPEEQQLKFAHLLRAFSFGAPPHGGIALGLDRLVMLAVGAESIREVIAF 575

Query: 346 P 346
           P
Sbjct: 576 P 576


>gi|74316460|ref|YP_314200.1| aspartyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|97196989|sp|Q3SLL2|SYD_THIDA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|74055955|gb|AAZ96395.1| aspartyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
          Length = 597

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 70/193 (36%), Gaps = 20/193 (10%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR P    L  R  +   +R+Y   + F+E+++  L   +P     ++        +  
Sbjct: 130 LRREPMQKNLKLRYRVSKIMRDYLDTHGFMEVETPMLTRSTPEGARDYLVPSRVHDGMFY 189

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E
Sbjct: 190 ALPQ------SPQLFKQLLMVSGVDRYFQITKCFRDEDLRADRQPEFTQVDLETSFMGEE 243

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M     +IR   + A               +    ++ AEA  RY +      +    
Sbjct: 244 AIMGLVEGMIRDMMQKAQG---------IELPAAFPRMSYAEAMNRYGSDKPDLRVTLEI 294

Query: 191 QPDRHLLYLQAQQ 203
                ++   A +
Sbjct: 295 VDVGDVMRDVAFK 307



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 41/153 (26%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G           +    + E  E     +        P            
Sbjct: 411 ALRLKIGHEKGHVDGRAWAPLWVVDFPMFEYNEDENRWDALHHPFTAPKDGHEDWLATDP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               +K +++     E+      +     Q   F            E        L  L 
Sbjct: 471 GKCLSKAYDMVLNGWEVGGGSVRIHREKVQEKVFAALNI----GEEERREKFGFLLDALQ 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DRLV L+ GA +I +VI  P
Sbjct: 527 YGAPPHGGLAFGLDRLVTLMAGAESIRDVIAFP 559


>gi|322412865|gb|EFY03773.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 582

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 70/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +      +           +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMIAKVMKETKGIDVTLPFPRLSYDVAMNSYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T        +      A +   ++   D        ++   
Sbjct: 296 LQDLTATVKGIDFKVFSEATAVKAIVVKGNADRYSRKDIDKLTEF 340



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 402 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +   E        L  
Sbjct: 462 AKVQAIAYDIVLNGYELGGGSLRINQKEMQELMF------KALGFTAEEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|315641700|ref|ZP_07896745.1| aspartate--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315482549|gb|EFU73083.1| aspartate--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 591

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 22/182 (12%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     LL R     ++R Y  +N F++I++  L   +P     ++            
Sbjct: 135 RRPQMTKNLLLRTKTTQAIRRYLDDNDFLDIETPYLAKSTPEGARDYLVPSRVHPGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+A+G ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQIFKQLLMASGMDRYYQIVRCFRDEDLRGDRQPEFTQVDIETTFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I+   +       +              +T  EA  RY   D   T    + 
Sbjct: 249 IQTYTEGLIQKVMKDVKGIDVT---------LPFPRMTWQEAMNRY-GSDKPDTRFEMEL 298

Query: 192 PD 193
            D
Sbjct: 299 ID 300



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 44/146 (30%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+  A    +  +      E  E              P                 + 
Sbjct: 415 KELGLIDATKFNYLWVVDWPQFEYDEEAGRYVSAHHPFTMPKASDVELLATDPARVHAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   FE     ++    E        L  L    P   
Sbjct: 475 YDIVLNGYELGGGSLRIHTREVQEQMFETLGFSRR----EMTEQFGFLLEALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DR  ML+ G +NI EVI  P
Sbjct: 531 GIALGLDRFAMLLAGEDNIREVIAFP 556


>gi|169824555|ref|YP_001692166.1| aspartyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|167831360|dbj|BAG08276.1| aspartyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 588

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 57/160 (35%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  I    L E  E              P  E     +   
Sbjct: 411 ALRNRIARDMNLVDNDTFEFVWIVDFPLFEYDEEENRFVAMHHPFTMPKEEDIQYLLTDK 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +    K +++     E+      + +   Q+  FE  ++  +++    +     F+    
Sbjct: 471 EKVRAKAYDIVCNGDEIGGGSIRINNSDLQKKMFEA-LELTEEMIENKFG---FFVEAFN 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A G DRL+ML+ G +NI +VI  P +QS  +
Sbjct: 527 YGTPPHGGLAYGMDRLMMLLVGTDNIKDVIAFPKTQSATD 566



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 74/217 (34%), Gaps = 8/217 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + +  L  R      +REY  EN F EI++  L + +P     ++ A          
Sbjct: 137 RKPKLQNNLKLRAKTNKLIREYLDENGFYEIETPVLGKPTPEGARDYLVASRVNEHRFYA 196

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    E 
Sbjct: 197 LPQ------SPQLMKQLLMISGMDRYYQIVKCFRDEDLRANRQPEFTQVDMEMSFVDQED 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I+   +                    E     +   R+       T    D 
Sbjct: 251 VMTINEGLIKKLFKEIRGIDIPTPIKRMTYSEAMERYGCDKPDLRFGFELKNITELVKDS 310

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             +       +   +R  +   +   +SR  I+K+E 
Sbjct: 311 EFKVFSSCNEKNKSVRCINIGNYESEYSRKKIDKLEK 347


>gi|296815160|ref|XP_002847917.1| asparaginyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238840942|gb|EEQ30604.1| asparaginyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 540

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 58/392 (14%), Positives = 107/392 (27%), Gaps = 65/392 (16%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS 52
           + Q+P         H R R          R+     L E F  +    F+++    +  S
Sbjct: 162 LRQLP---------HLRLRTPFNSLLSRLRSEFIYQLTEEFRSHRNQNFVQVQPPLITSS 212

Query: 53  ---PGNETHI---RAFSTELI-IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                 E      R   TE   + +  R P YL  S +   +            +A    
Sbjct: 213 DCEGAGEVFSLKPRDAITEEGKVIEFFRSPKYLTVSSQLHLE-----------AYARGVG 261

Query: 106 NGEQG-CLHQPEFTMLEWYRAHESY-EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
             +     H  EF MLE   ++    E L      +IR       Q   + +        
Sbjct: 262 AEKSDTPRHLSEFYMLEVEMSYLDSLEPLTSFVETLIRNITRRVYQTPVAQELFGLRETD 321

Query: 164 EPEYITVA-EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG-IRVAHDDTWSDIFSRI 221
           +    T+  +   R+  +  GT+               A   G  +     +WS      
Sbjct: 322 DLTKDTIQVDLEKRWTALIEGTSWPRITYSHAIKHLQNAVSTGRAKFDFSPSWSGGLQLE 381

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALAN------IYPADPRFTKRFELYACNIELCNAC 275
             + +   +G      +  YP                           L     E+    
Sbjct: 382 HEKFLVDTIGKGLPIFVTDYPKAVKPFYMLPSGEPPNENGETVACFDLLLPEICEVVGGS 441

Query: 276 DELL--DPIEQRHRFEKEMQEKKKIYNETYPIDED----FLACLT--------------E 315
                  P+ Q  R    ++ +    + T+ +D      +L                   
Sbjct: 442 LREHRLSPLIQNMREHGLLKLRNSTPDPTFAVDAKAPYPYLLANEELGSIQWYADLRRWG 501

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                G  +GFDR +  + G +++ +++  P 
Sbjct: 502 TVPHGGFGLGFDRFIGYLAGVSSLRDLVPFPR 533


>gi|297626348|ref|YP_003688111.1| Aspartyl-tRNA synthetase (aspartate--tRNA ligase) (AspRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922113|emb|CBL56681.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 615

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 62/187 (33%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    L+ R+ +  ++R       F +I++ +L   +P      R F     +    
Sbjct: 132 RRPRMHDALVLRSHVTHAIRGVLEGRDFYDIETPTLTRSTPEG---ARDFLVPARLS--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     ++    ++             +       IT  EA  RY +        N    
Sbjct: 247 MALGEEVMAACWKLVG----------VDLPRPMRRITWHEAMDRYGSDKPDLRFGNEITE 296

Query: 193 DRHLLYL 199
                  
Sbjct: 297 VTDFFAD 303



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P+    + +  DP       ++      E+      +     Q   F+     ++  
Sbjct: 454 FTSPKPESMDSFDTDPGSALSYGYDFVCNGNEVGGGSIRIHRRDVQERVFKVMGLSQE-- 511

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G + I +VI  P
Sbjct: 512 --EAQQKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFDTIRDVIAFP 558


>gi|315169379|gb|EFU13396.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1342]
          Length = 589

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 46/146 (31%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    L E  E              P  E            + + 
Sbjct: 415 KELGLIEESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   FE     K+    E        L  L    P   
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKE----EAQDQFGFLLDALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DRL ML+ G  NI EVI  P
Sbjct: 531 GIALGLDRLAMLLAGEENIREVIAFP 556



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 21/178 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP     +  R+ +  ++R Y   + F++I++  L + +P     ++            
Sbjct: 135 RRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQIDIETTFLTPEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           +     N++    +       S              ++  EA ARY +    T     
Sbjct: 249 IQTYTENMLAEVMKETKGIEIS---------VPFPRMSYDEAMARYGSDKPDTRFAME 297


>gi|242786063|ref|XP_002480728.1| asparaginyl-tRNA synthetase Slm5, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218720875|gb|EED20294.1| asparaginyl-tRNA synthetase Slm5, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 565

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 59/418 (14%), Positives = 113/418 (27%), Gaps = 83/418 (19%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFV---ENQFIEIDSMSLQYS 52
           + QIP         H R R          R+     L + F    +  F+++    +  S
Sbjct: 153 LRQIP---------HLRLRTPFNSLLSRFRSETIYQLGQVFRSVPQGGFVQVQPPLITSS 203

Query: 53  ---PGNETH-------------IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
                 ET               +    E  +    R P YL  S +   +   AA    
Sbjct: 204 DCEGAGETFTLSPQSSAPPPSGSKGSEDEEHLH-FFRSPKYLTVSSQLHLEAY-AAELGN 261

Query: 97  IFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI-IRCAAEVANQKIFSF 154
           ++  +  +R  +     H  EF MLE           + D +   IR  A        + 
Sbjct: 262 VWALSPTFRAEKSKTPRHLSEFYMLEAEVNFTDDLPALLDLVEYLIRDLARRLYDTPVAQ 321

Query: 155 QNVNCNPFSEPEYITVAEAF------ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
           + ++     E    +  +              +              LL       G+  
Sbjct: 322 EVLSAKRTGESGLDSSDDIHAVLRRRWEVLLSETINWPRITYTRAIELLQDAQTNHGVSF 381

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFEL-YAC 267
            +  +WS+       + I   +       +  YP                    +   AC
Sbjct: 382 VYPPSWSEGLQLEHEKYIVDTIFQGVPVFVTDYPQKVKPFYMAPSEGADAAHPDQATVAC 441

Query: 268 NIELCNACDELLDPIEQRHRFEKEM-QEKKKI-------------------YNETYPID- 306
              L     E++    + HR  + + + ++                      +E + +D 
Sbjct: 442 FDLLFPEICEVVGGSLREHRLPQLIIKMREYGLIKHGSTKPSSSSQPNDDKDDE-HVLDL 500

Query: 307 ---EDFLACLT--------------EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                +L                        G  +GFDRL+  + G +++ +V+  P 
Sbjct: 501 SKNYPYLQPSETLGHLQWYADLRRWGTAPHGGFGLGFDRLMGYLAGVSSLRDVVPFPR 558


>gi|324991803|gb|EGC23728.1| aspartate--tRNA ligase [Streptococcus sanguinis SK405]
          Length = 584

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIDVS---------LPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTELVKGVDFKVFSEAPVVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 46/156 (29%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +S        
Sbjct: 402 ALRVRLAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                  +++     EL      +     Q   F       K +        E F   L 
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERMF-------KALGFSAQEAAEQFGFLLE 514

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 515 AMDYGFPPHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|153839738|ref|ZP_01992405.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149746736|gb|EDM57724.1| aspartyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 452

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 70/195 (35%), Gaps = 19/195 (9%)

Query: 25  RNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSP 82
           R    S +R +  +N F++I++  L   +P     ++            + +      SP
Sbjct: 1   RAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYALPQ------SP 54

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
           +   + L+ +G ++ +     +R+ +     QPEFT ++   +  + +Q+ +    ++R 
Sbjct: 55  QLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQVREVTEKMVRE 114

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
                      +Q +      E   +  +EA  R+   D     +  +  D   L    +
Sbjct: 115 M----------WQELLNVDLGEFPVMPFSEAIRRF-GSDKPDLRNPLELVDVADLVKDVE 163

Query: 203 QAGIRVAHDDTWSDI 217
                   +D    +
Sbjct: 164 FKVFSGPANDEKGRV 178



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 8/146 (5%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRF 262
             + +  + TW+ ++        E + G ++        P   +A           +  +
Sbjct: 275 KDLGLTKEGTWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAVANSNAY 334

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACLT-EMPQSS 320
           ++     E+      + +   Q   F+        I  E   +   FL   L    P  +
Sbjct: 335 DMVLNGYEVGGGSVRIHNAEMQAAVFDIL-----GIDAEEQQLKFGFLLDALKFGTPPHA 389

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DRLVML+ G  NI +VI  P
Sbjct: 390 GLAFGLDRLVMLLCGTENIRDVIAFP 415


>gi|157165623|ref|YP_001467181.1| aspartyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|166225332|sp|A7ZEH3|SYD_CAMC1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|112801414|gb|EAT98758.1| aspartyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 585

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 76/218 (34%), Gaps = 9/218 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
              R +     R+    + R    +  FIE ++  L   +P     ++            
Sbjct: 132 RSERLQNIFKMRSRAAIAARNSLDKMGFIEFETPVLTRATPEGARDYLVPSRVYPGQFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 192 LPQ------SPQLFKQLLMCSGFDKYFQIAKCFRDEDLRADRQPEFTQIDIEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++     +++   +     I + F+ ++    +E       +       ID+    +   
Sbjct: 246 IINMAETMLKDIFKACGHDIKTPFRRMSYKEATETYGSDKPDLRYDLKMIDVIDIFERSS 305

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                 +    ++  I+        +IFS+  + + E 
Sbjct: 306 NEIFSSIAKDKKKNRIKALKVPNGDNIFSKREMNRFEE 343



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 53/152 (34%), Gaps = 18/152 (11%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A+Q GI       +  +    +          +       +P       +    +   +
Sbjct: 412 LAEQMGIIDQDRLEFLWVLDFPMF-----EQNDDGSYSAMHHPFTMPKNIDEPDLEDILS 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT- 314
              ++     EL      +     Q+  F+     E ++++K            L  LT 
Sbjct: 467 IAHDVVLNGFELGGGSIRIHKNDIQQKVFKLLGIDEAEQREKFG--------FLLDALTF 518

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA+GFDRL MLV  A++I +VI  P
Sbjct: 519 GAPPHGGIAIGFDRLNMLVNKASSIRDVIAFP 550


>gi|299822823|ref|ZP_07054709.1| aspartate--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816352|gb|EFI83590.1| aspartate--tRNA ligase [Listeria grayi DSM 20601]
          Length = 592

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 62/182 (34%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+++  + R+   E  F++I++  L   +P     ++            
Sbjct: 135 RRPEMNQIFRMRHLVTQTFRDKLNELGFLDIETPYLTKSTPEGARDYLVPSRVYPGSFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L++AG +K +     +R+ +     QPEFT ++   +  S E+
Sbjct: 195 LPQ------SPQIMKQLLMSAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLSKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +                      +T  EA  RY  ID        + 
Sbjct: 249 IQTIMEEMLAAVVKNVKGIEIE---------RPFRRMTYTEAMDRY-GIDKPDIRFGLEL 298

Query: 192 PD 193
            D
Sbjct: 299 KD 300



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 46/154 (29%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+    +  +  I    L E  E              P  +         
Sbjct: 409 ALRNKLGKELGLIDEDELAFIWITDWPLFEYDEEAGRFVSAHHPFTLPQEDDIALLESAP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
           +    + +++     E+      +     Q   F           +E       FL   L
Sbjct: 469 EKAMAEAYDIVLNGYEIGGGSLRIYQKDVQEKMFRAL-----GFSDEAMQEQFGFLLEAL 523

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA+G DR+VM++    N+ + I  P
Sbjct: 524 EYGFPPHGGIALGLDRIVMILAKRTNLRDTIAFP 557


>gi|326576013|gb|EGE25936.1| aspartyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 598

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 71/207 (34%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  +  R    S++R Y  ++ F+++++  L   +P     ++    T       
Sbjct: 134 RRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLVPSRTRQGNFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 194 LPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLSDEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F+ +    F     +T A+A   YA+ D          
Sbjct: 248 IMDITE----------GLTKNLFKTMLDVEFDTFPRMTYADAMRDYAS-DKPDLRIPLKL 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   +    +         D    + 
Sbjct: 297 IDVADIMQHVEFKVFSGPAQDPKGRVV 323



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S        +   +
Sbjct: 422 KIGTDLNLFTCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTRPKGSVEELKQSPETALS 479

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
             +++     E+      +     Q   F+     K+    E     +  +  L    P 
Sbjct: 480 IAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKE----EAELKFKFLMDALRFGAPP 535

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             G+A G DRL+ML+ GA++I +VI  P +++
Sbjct: 536 HGGLAFGLDRLIMLMVGASSIRDVIAFPKTKT 567


>gi|254428816|ref|ZP_05042523.1| aspartyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196194985|gb|EDX89944.1| aspartyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 587

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 68/217 (31%), Gaps = 29/217 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   + R               R+ +   +R +     F+++++  L   +P     ++ 
Sbjct: 121 EVRLKYRYMDLRRPEVLRNFQFRSRLTHVVRAFLEGEGFMDVETPILTRATPEGARDYLV 180

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T       + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT +
Sbjct: 181 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQI 234

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    E +M     ++R   +                  +   +  +EA  R+   
Sbjct: 235 DLEASFVEEEDIMGITERMVRSVFKELLD----------VELPDFPRMPFSEAMQRF-GS 283

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           D        +  D   L             +D    +
Sbjct: 284 DKPDLRIPLELIDIADLLAGVDFKVFSGPANDPKGRV 320



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 6/138 (4%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           W+ ++        E     +        P+  +      PA+   ++ +++     EL  
Sbjct: 426 WAPLWVVDFPMFEEDEGQYHALHHPFTMPSCSAEELKSNPAEA-LSRAYDMVLNGTELGG 484

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVML 332
               + +P  QR  FE           E        L  L    P   G+A G DR+VML
Sbjct: 485 GSIRIHNPAMQRTVFEALGIS----DEEADEKFGFLLDGLKYGAPPHGGLAFGLDRMVML 540

Query: 333 VTGANNINEVIWTPFSQS 350
           +TG  +I +VI  P +Q+
Sbjct: 541 MTGCESIRDVIAFPKTQT 558


>gi|282901704|ref|ZP_06309620.1| Aspartyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505]
 gi|281193467|gb|EFA68448.1| Aspartyl-tRNA synthetase [Cylindrospermopsis raciborskii CS-505]
          Length = 598

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 69/182 (37%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
              R    +  R+ +  ++R Y  +   FIEI++  L   +P      R +     + + 
Sbjct: 136 RRERMAKNIQLRHQVVKAMRRYLEDQEGFIEIETPVLTRSTPEG---ARDYILPSRVNE- 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E+
Sbjct: 192 -GQWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSEEE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +            + +       +   +A  +Y   D   T    + 
Sbjct: 251 IIQLNEKLVCHIFKTV---------QDIDLPHPFPRLRYQDAMNKY-GTDKPDTRYGLEL 300

Query: 192 PD 193
            D
Sbjct: 301 VD 302



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 42/135 (31%), Gaps = 15/135 (11%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
           F  I    +              +P       +++       + ++L     E+      
Sbjct: 436 FLWITEFPMFEWNANEKRLEALHHPFTAPHPDDLHDLKTARAQAYDLVLNGFEVGGGSLR 495

Query: 278 LLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVM 331
           +     Q   FE      +E + K     E +             P   GIA G DRLVM
Sbjct: 496 IYQREIQARVFETIGLSSEEARNKFGFLLEAFE---------YGTPPHGGIAYGVDRLVM 546

Query: 332 LVTGANNINEVIWTP 346
           L+    +I +VI  P
Sbjct: 547 LLAQEESIRDVIAFP 561


>gi|260494401|ref|ZP_05814532.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260198547|gb|EEW96063.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 592

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +  S+R Y  +  F+++D+  L   +P      +    T       
Sbjct: 136 RRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGARDFLVPSRTNPGTFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDIEMSFVEKED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           + +  AEA  R+   D        + 
Sbjct: 250 VMNEIEGLAKYVFKNVTGEEANYT---------FQRMPYAEAMDRF-GSDKPDLRFGVEL 299

Query: 192 PD 193
            D
Sbjct: 300 KD 301



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 24/170 (14%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    D  +  +    + +  E           + +P       ++   
Sbjct: 411 ALRLKIGKDLDLINKDDFKFLWVVDFPMFDYDEEE----QRYKAEHHPFTSIKAEDLDKF 466

Query: 255 DPRFTKR-----FELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPI 305
               T+      ++L     E+      + +P  Q   F++    + + K K        
Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFG------ 520

Query: 306 DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
              FL       P   G+A G DR +M++    +I +VI  P  ++N+ +
Sbjct: 521 --FFLDAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFP--KTNKGQ 566


>gi|238922193|ref|YP_002935707.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238873865|gb|ACR73573.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 598

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 64/188 (34%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ + +  R +     F+EI++  L   +P     ++            
Sbjct: 141 RRPDIQSNIIMRSKVATLTRAFLANEGFLEIETPMLTKSTPEGARDYLVPSRIHPGKFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQMLMCSGYDRYMQIARCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +            + +     + +T  EA  R+ +           Q
Sbjct: 255 VIDVNERLLAYLFKEVL---------DVDVKLPIQRMTWQEAMDRFGSDKPDLRFGMELQ 305

Query: 192 PDRHLLYL 199
               ++  
Sbjct: 306 NVSDIVKD 313



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 45/158 (28%), Gaps = 9/158 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A Q G+    D  +  +      E  +              P  E         
Sbjct: 415 ALRVELANQMGLLDKSDYKFLWVTEFPQFEWSDEEERYVAMHHPFTMPMDEDLDMLETNP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                K +++     E+      +     Q   F      K                L  
Sbjct: 475 GAVRAKAYDIVLNGTEIGGGSVRIHQADVQSRMF------KALGLTDEVANEKFGFLLDA 528

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
               +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 529 FKYGVPPHAGLAYGLDRLVMLMAKRDSIRDVIAFPKVK 566


>gi|46581768|ref|YP_012576.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|62287574|sp|Q725Q7|SYD_DESVH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46451191|gb|AAS97836.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232327|gb|ADP85181.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 610

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 50/156 (32%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L     Q  G+       +  +    L E  E       C      P            
Sbjct: 424 NLRVKLGQHLGLIPEDTYNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHFDLMTSDP 483

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                + +++     EL      +     QR  F         +  +    +E F   + 
Sbjct: 484 AAARARAYDMVLNGYELGGGSIRIHSAEVQRRMF-------AALGLDPQEAEEKFGFLIQ 536

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   GIA G DRLVML+TG+ +I +VI  P
Sbjct: 537 ALEHGAPPHGGIAFGMDRLVMLLTGSPSIRDVIAFP 572



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 61/181 (33%), Gaps = 16/181 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R     + R+    S R Y  E  F+EI++  L   +P      R F     +    
Sbjct: 155 RRPRMARNFMLRHRAAQSARRYLDELDFLEIETPYLTKATPEG---ARDFLVPSRLNH-- 209

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G ++ +     +R+ +     Q EFT ++   +    E++
Sbjct: 210 GMFYALPQSPQIFKQLLMVSGMDRYYQIVRCFRDEDMRADRQLEFTQIDIEMSFVDEERV 269

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     ++    +       +              +T  +A   Y  +D   T  +    
Sbjct: 270 MSMAEGLMSRVMKDTLGVDVT---------VPFPRMTYDQAMGEY-GVDKPDTRFDLRLK 319

Query: 193 D 193
           D
Sbjct: 320 D 320


>gi|333030609|ref|ZP_08458670.1| aspartyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332741206|gb|EGJ71688.1| aspartyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 588

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 62/187 (33%), Gaps = 17/187 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R Y     F+E+++  L   +P      R F     +    
Sbjct: 132 RRPNVRKNLELRHKMTMEVRRYLDNQGFLEVETPVLIGSTPEG---ARDFVVPSRMN--- 185

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGEFYALPQSPQIFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++ +   + +   +       +              IT  +A   Y +       D    
Sbjct: 246 VISNFEGMAKHLFKTIRGIELTET---------FPRITWHDAMKYYGSDKPDLRFDMQFV 296

Query: 192 PDRHLLY 198
               +L 
Sbjct: 297 ELMDVLK 303



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 45/157 (28%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A + G+R  +      +    L E  E +            P  E         
Sbjct: 405 ELRLKVADELGLRDKNKFACLWVIDFPLFEWDEEDERFVAVHHPFTSPKEEDIQYIDSDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFL 310
                  +++    +E+      + D   Q   FE       + K++            +
Sbjct: 465 GRVRANAYDMVINGVEVGGGSIRIHDSELQNKMFEVLGFTPEKAKEQFG--------FLM 516

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   GIA G DR V L    ++I + I  P
Sbjct: 517 NAFQYGAPPHGGIAYGLDRWVSLFAELDSIRDCIAFP 553


>gi|39996563|ref|NP_952514.1| aspartyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|62287579|sp|Q74D56|SYD_GEOSL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|39983444|gb|AAR34837.1| aspartyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298505579|gb|ADI84302.1| aspartyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 594

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 50/157 (31%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    AQ  G+       +  I    L+E  E              P  E         
Sbjct: 414 KLRNQLAQILGLVDKGTFKFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLDKVESDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                K ++L     E+      +     Q   F      E + + K            L
Sbjct: 474 GACRAKAYDLVLNGNEIGGGSIRIHQQHIQSLMFRMLGLSEEEARAKFG--------FLL 525

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   GIA G DRL+ML+TG+++I +VI  P
Sbjct: 526 DALEFGTPPHGGIAFGMDRLIMLLTGSDSIRDVIAFP 562



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 26/210 (12%)

Query: 9   WWNRDFHYRRRPF-----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
              +  +   R       L+ R+ +    R+Y  EN F+EI++  L   +P      R F
Sbjct: 131 LRLKHRYLDLRRTPLQQNLILRSRVSQVTRQYLTENGFLEIETPFLTKSTPEG---ARDF 187

Query: 63  STELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                I    +   Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++
Sbjct: 188 LVPSRIN---QGNFYALPQSPQIFKQILMISGFDRYFQVVRCFRDEDLRADRQPEFTQID 244

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + ++     +I              +    +       +T AEA  RY  +D
Sbjct: 245 CELSFVDRDDVIAVMEGLIA---------RIFKEAKEIDVQLPIPRMTYAEAIRRY-GVD 294

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
                   +  +   L    + +G +V  D
Sbjct: 295 NPDVRFGLELVE---LTDIVKGSGFKVFAD 321


>gi|319786198|ref|YP_004145673.1| aspartyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464710|gb|ADV26442.1| aspartyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 586

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 75/229 (32%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   R      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 105 PLPFHAHENPTEETRLRYRYLDLRRPEMQRMQRTRIKLVQALRRHLDAAGFQDIETPILT 164

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 165 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 218

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +         Q            +
Sbjct: 219 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMIRAIFKEVVGVELEAQ---------FPRM 269

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D      + +  D   L   +Q A      +D    +
Sbjct: 270 TWAEAMRRY-GSDKPDLRIDLELVDVAELVKDSQFAVFTGPANDPDGRV 317



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 50/158 (31%), Gaps = 5/158 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    VA       +    + E  E              PA +        A 
Sbjct: 403 ALRLKAGKDFGLVAEGWRPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIAELRAHAK 462

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 463 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEAEAKFGFLLDALKY 518

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             P   GIA G DR+  L+ G  +I +VI  P + S Q
Sbjct: 519 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFPKTTSAQ 556


>gi|311897070|dbj|BAJ29478.1| putative aspartyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 435

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 60/339 (17%), Positives = 106/339 (31%), Gaps = 63/339 (18%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKR----------NMIQSSLREYFVENQFIEIDSMSLQYSP 53
           +P       D     R   ++R            ++ ++RE   E  F E+ +  L  + 
Sbjct: 104 LPIDEHTGLDQRLDWRFLDIRRPSQHLVFAVQTTVEQAMREVTAEEGFTELHTPKLMGTA 163

Query: 54  GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCL 112
            +E+    F       D+  +  YL  SP+F  +  +AAG +K+F     +R        
Sbjct: 164 -SESGAEVFKV-----DYFERTAYLAQSPQFYKQMAIAAGIDKVFEIGPVFRAEPSFTSR 217

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN------PFSEPE 166
           H  EFT ++   A     + +      +         +                P +   
Sbjct: 218 HATEFTGVDAELAWIDGVEDVMAFEERLLQRVLRRVSERHGDAVTEHFGARVVVPETPFP 277

Query: 167 YITVAE--AFARYANIDLGTTLDNPDQP-DRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
            +T+A+     R    D     D+ D   +R L  L A++ G                  
Sbjct: 278 RLTMADALTKLRATGWDPEGAKDDLDPEGERRLCALVAEETGHEF--------------- 322

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYP-ADPRFTKRFELYACNIELCNACDELLDPI 282
                         + R+PA      ++ P  DP  T+ F+L    +E+           
Sbjct: 323 ------------VFVTRFPASVRPFYHLRPEDDPTVTESFDLLWKGVEITTGAQREHRH- 369

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
               R   + +EK     ET P+   +L C     P   
Sbjct: 370 ---ERLIAQAREK---GMETEPL-AGYLNCFRFGTPPHG 401


>gi|300856529|ref|YP_003781513.1| aspartyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300436644|gb|ADK16411.1| aspartyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 590

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 67/194 (34%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+     +R++  E  F+EI++  L + +P     ++          ++
Sbjct: 139 RRPDMQRILMTRHKTAKVVRDFLDEEGFLEIETPMLGKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             K   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 NGKFYALPQSPQLFKQLLMVSGYDRYFQIVKCFRDEDLRANRQPEFTQIDMELSFVEQDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      I+   +                    E     +   R+  +++    +    
Sbjct: 253 VINLNERFIQRVFKKILNVDVKLPIERMPYKIAMEKYGSDKPDLRF-GMEINDISEVVKN 311

Query: 192 PDRHLLYLQAQQAG 205
            D  +     +  G
Sbjct: 312 IDFKVFQSAIEAGG 325



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 16/153 (10%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILI-EKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
           A++ GI   +D+      +   +    E              P  E              
Sbjct: 418 AKETGILDGNDEFRFVWVTEFPLLSYNEDEQRYQAEHHPFTAPMDEDIQYLESDPGRVRA 477

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE-----KEMQEKKKIYNETYPIDEDFLACLT 314
           K +++     EL      + D   Q   F+     +E   +K  Y          L    
Sbjct: 478 KAYDIVLNGEELGGGSIRIHDTKLQERMFKVIGISQENAWEKFGY---------LLEAFK 528

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A GFDR+VM +   +NI +VI  P
Sbjct: 529 FGPPPHGGLAYGFDRMVMFLAKTDNIKDVIAFP 561


>gi|305433173|ref|ZP_07402329.1| aspartate--tRNA ligase [Campylobacter coli JV20]
 gi|304443874|gb|EFM36531.1| aspartate--tRNA ligase [Campylobacter coli JV20]
          Length = 583

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 76/231 (32%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 119 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 179 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++      ++   +   ++    F+ +      E       +     
Sbjct: 233 QIDVEMSFCEQKDVIATAETFLKDIFKACGKEIQIPFRQMPYKEAMENYGSDKPDLRFDL 292

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +   +++  ++         IFS+  +++ E 
Sbjct: 293 KLIDVIDIFAKSNNEIFANIAKDSKKNRVKALRVPKGDTIFSKRQMQRFEE 343



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 436 EQNDDGSYSAMHHPFTMPKNIDEADLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 495

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 496 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 545

Query: 342 VIWTP 346
           VI  P
Sbjct: 546 VIAFP 550


>gi|325689244|gb|EGD31250.1| aspartate--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 584

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 73/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +                      +   +A A Y  +
Sbjct: 236 DLETSFLSEQEIQDITEGLIARVMKETKGIDVE---------LPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTELVKGVDFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 45/156 (28%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +S        
Sbjct: 402 ALRVRLAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                  +++     EL      +     Q   F       K +        E F   L 
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKALQERMF-------KALGFSAQEAAEQFGFLLE 514

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +    P   G+A+G DR  ML+ G  NI EVI  P
Sbjct: 515 AMDYGFPPHGGLALGLDRFAMLLAGEENIREVIAFP 550


>gi|289423169|ref|ZP_06424984.1| aspartate--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156500|gb|EFD05150.1| aspartate--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 593

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 50/156 (32%), Gaps = 10/156 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A + G+   +      +    + E+ E N            P  E         
Sbjct: 412 QVRIAVADKLGLADPNKFNLLWVTEFPIFEEDEENGRFAAKHHPFTSPMDEDLDHLEDED 471

Query: 255 D-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLA 311
                 K +++     E+      + D   Q+  F      K       E Y      + 
Sbjct: 472 KLKLRAKAYDIVLNGYEIGGGSIRISDSQVQKRMF------KALGFTDEEAYNKFGFLID 525

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 P   G+A G DRLVML+ GA+NI EVI  P
Sbjct: 526 AFKFGTPPHGGMAFGLDRLVMLLAGADNIREVIAFP 561



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 66/218 (30%), Gaps = 13/218 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R+ + +  R Y  +N F EI++  L   +P     ++            
Sbjct: 138 RKPKMQKNLMLRHRVTNIARNYLSDNNFCEIETPFLVKPTPEGARDYLVPSRVNEGRFYA 197

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +      
Sbjct: 198 LPQ------SPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQPEFTQIDLEMSFVEEND 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI-----DLGTTL 186
           +M      ++   +                    +     +   RY        D+    
Sbjct: 252 VMTMMEGFLQKLFKEIKGIDIDLPLPRLTYKEAMDRFGSDKPDTRYGLEFVNISDVVADC 311

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
                 D        +   ++   ++      S +   
Sbjct: 312 GFKVFADSTKDGKSVRGINVKGGAEEFTRKAISHLEDH 349


>gi|325283191|ref|YP_004255732.1| aspartyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315000|gb|ADY26115.1| aspartyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 575

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 46/136 (33%), Gaps = 10/136 (7%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           W   F ++  +K               +P   +             + ++L     E+  
Sbjct: 417 WVTDFPQLDYDKDSGTWTYMHHPFTAPHPDDTALFGTE-RQHEIRAQAYDLVMNGFEIGG 475

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
               +  P  QR  F      +       E       FL  L    P   G A GFDRLV
Sbjct: 476 GSVRIHSPQTQREMF------RAIGLSDEEAQEKFGFFLEALEYGTPPHGGAAWGFDRLV 529

Query: 331 MLVTGANNINEVIWTP 346
           M+++GA +I +VI  P
Sbjct: 530 MVLSGAASIRDVIAFP 545



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 69/209 (33%), Gaps = 29/209 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   R R            L+ R+   +++ E+     FI I++  L   +P      R 
Sbjct: 119 DVRLRYRYLDLRRPEMQRGLMLRSRTWAAITEFMEREGFINIETPMLTRSTPEG---ARD 175

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     +        Y L  SP+   + L+ AG ++ +  A  +R+ +     QP+FT L
Sbjct: 176 FLVPSRLN---EGEFYALPQSPQLFKQMLMMAGYDRYYQLARCFRDEDLRSDRQPDFTQL 232

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN- 179
           +   +    E ++     ++         +  S              +T  EA  +Y + 
Sbjct: 233 DMEMSFVDQEDVLDMNSRLLAHIFGQVMGQQLS---------LPLPRLTYQEAMDKYGSD 283

Query: 180 -IDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
             DL       D  D          AG  
Sbjct: 284 KPDLRFEHALVDVTDLFAGGEFKAFAGAE 312


>gi|218887128|ref|YP_002436449.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758082|gb|ACL08981.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 614

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 65/181 (35%), Gaps = 16/181 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R     + R+    + R Y  E  F+EI++  L   +P      R F     +    
Sbjct: 155 RRPRMANNFIVRHKAAQATRRYLDELGFLEIETPYLTKSTPEG---ARDFLVPSRLN--Q 209

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G E+ +     +R+ +     Q EFT ++   +    EQ+
Sbjct: 210 GQFYALPQSPQLFKQLLMMSGMERYYQIVRCFRDEDMRADRQLEFTQIDIEMSFVDEEQV 269

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     ++      A  +            +    ++  +A ARY  +D   T    +  
Sbjct: 270 MAMAEGLMARVFRDALDREI---------ATPFPRMSYDDAMARY-GVDKPDTRFGLELQ 319

Query: 193 D 193
           D
Sbjct: 320 D 320



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 47/147 (31%), Gaps = 7/147 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +  G+   +   +  +    L E  E       C      P        +        + 
Sbjct: 431 EHLGLIDENAFNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHMDVMVENPAAARARA 490

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-CLT-EMPQS 319
           +++     EL           +QR  F            E       FL   L    P  
Sbjct: 491 YDMVLNGYELGGGSIRNHTAEKQRRMF-----AALGFSPEEAEAQFGFLTQALEMGAPPH 545

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            GIA G DRL ML+TG+++I +VI  P
Sbjct: 546 GGIAFGMDRLAMLLTGSSSIRDVIAFP 572


>gi|256961541|ref|ZP_05565712.1| aspartyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|293384699|ref|ZP_06630554.1| aspartate--tRNA ligase [Enterococcus faecalis R712]
 gi|293387399|ref|ZP_06631954.1| aspartate--tRNA ligase [Enterococcus faecalis S613]
 gi|312908315|ref|ZP_07767279.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312910611|ref|ZP_07769453.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|256952037|gb|EEU68669.1| aspartyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|291078006|gb|EFE15370.1| aspartate--tRNA ligase [Enterococcus faecalis R712]
 gi|291083190|gb|EFE20153.1| aspartate--tRNA ligase [Enterococcus faecalis S613]
 gi|310625729|gb|EFQ09012.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311289159|gb|EFQ67715.1| aspartyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 589

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 46/146 (31%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    L E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLATDPASVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   FE     K+    E        L  L    P   
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKE----EAQDQFGFLLDALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DRL ML+ G  NI EVI  P
Sbjct: 531 GIALGLDRLAMLLAGEENIREVIAFP 556



 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 21/178 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP     +  R+ +  ++R Y   + F++I++  L + +P     ++            
Sbjct: 135 RRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQIDIETTFLTPEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           +     N++    +       S              +   EA ARY +    T     
Sbjct: 249 IQTYTENMLAEVMKETKGIEIS---------VPFPRMRYDEAMARYGSDKPDTRFAME 297


>gi|120601079|ref|YP_965479.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|120561308|gb|ABM27052.1| aspartyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 610

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 50/156 (32%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L     Q  G+       +  +    L E  E       C      P            
Sbjct: 424 NLRVKLGQHLGLIPEDTYNFLWVTDFPLFEYDEEEKRYVACHHPFTSPKDGHFDLMTSDP 483

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                + +++     EL      +     QR  F         +  +    +E F   + 
Sbjct: 484 AAARARAYDMVLNGYELGGGSIRIHSAEVQRRMF-------AALGLDPQEAEEKFGFLIQ 536

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   GIA G DRLVML+TG+ +I +VI  P
Sbjct: 537 ALEHGAPPHGGIAFGMDRLVMLLTGSPSIRDVIAFP 572



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 61/181 (33%), Gaps = 16/181 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R     + R+    S R Y  E  F+EI++  L   +P      R F     +    
Sbjct: 155 RRPRMARNFMLRHRAAQSARRYLDELDFLEIETPYLTKATPEG---ARDFLVPSRLNH-- 209

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G ++ +     +R+ +     Q EFT ++   +    E++
Sbjct: 210 GMFYALPQSPQIFKQLLMVSGMDRYYQIVRCFRDEDMRADRQLEFTQIDIEMSFVDEERV 269

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     ++                +  +       +T  +A   Y  +D   T  +    
Sbjct: 270 MSMAEGLM---------TRVMKDTLGVDVTLPFPRMTYDQAMGEY-GVDKPDTRFDLRLK 319

Query: 193 D 193
           D
Sbjct: 320 D 320


>gi|326570106|gb|EGE20151.1| aspartyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 598

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 71/207 (34%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  +  R    S++R Y  ++ F+++++  L   +P     ++    T       
Sbjct: 134 RRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLVPSRTRQGNFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 194 LPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLSDEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F+ +    F     +T A+A   YA+ D          
Sbjct: 248 IMDITE----------GLTKNLFKTMLDVEFDTFPRMTYADAMRDYAS-DKPDLRIPLKL 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   +    +         D    + 
Sbjct: 297 IDVADIMQHVEFKVFSGPAQDPKGRVV 323



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S        +   +
Sbjct: 422 KIGTDLNLFTCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTRPKGSVEELKQSPETALS 479

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
             +++     E+      +     Q   F+     K+    E     +  +  L    P 
Sbjct: 480 IAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKE----EAELKFKFLMDALRFGAPP 535

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             G+A G DRL+ML+ GA++I +VI  P +++
Sbjct: 536 HGGLAFGLDRLIMLMVGASSIRDVIAFPKTKT 567


>gi|296113406|ref|YP_003627344.1| aspartyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921100|gb|ADG61451.1| aspartyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 612

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 71/207 (34%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  +  R    S++R Y  ++ F+++++  L   +P     ++    T       
Sbjct: 148 RRPEMQERMKFRAKATSTIRRYLDDHGFLDVETPVLTRATPEGARDYLVPSRTRQGNFFA 207

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 208 LPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLSDEE 261

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F+ +    F     +T A+A   YA+ D          
Sbjct: 262 IMDITE----------GLTKNLFKTMLDVEFDTFPRMTYADAMRDYAS-DKPDLRIPLKL 310

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   +    +         D    + 
Sbjct: 311 IDVADIMQHVEFKVFSGPAQDPKGRVV 337



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S        +   +
Sbjct: 436 KIGTDLNLFTCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTRPKGSVEELKQSPETALS 493

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
             +++     E+      +     Q   F+     K+    E     +  +  L    P 
Sbjct: 494 IAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKE----EAELKFKFLMDALRFGAPP 549

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             G+A G DRL+ML+ GA++I +VI  P +++
Sbjct: 550 HGGLAFGLDRLIMLMVGASSIRDVIAFPKTKT 581


>gi|154508879|ref|ZP_02044521.1| hypothetical protein ACTODO_01390 [Actinomyces odontolyticus ATCC
           17982]
 gi|293192667|ref|ZP_06609621.1| aspartate--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|153798513|gb|EDN80933.1| hypothetical protein ACTODO_01390 [Actinomyces odontolyticus ATCC
           17982]
 gi|292820174|gb|EFF79171.1| aspartate--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 609

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 72/220 (32%), Gaps = 24/220 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ +  + RE      F+EI++ +L   +P      R F     +    
Sbjct: 140 RREPEQYAIRLRSKVSRAAREALYARDFVEIETPTLTRSTPEGA---RDFIVPARLS--P 194

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ F  A  +R+ +     QPEFT L+   +    + +
Sbjct: 195 GSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQPEFTQLDIEMSFVDQDDV 254

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGT 184
           ++   ++++    +    + +              +T  +A  RY          ++L  
Sbjct: 255 IEVAEDVLKNVWALIGYDLST----------PIPRMTYKDAMERYGSDKPDLRFGLELTE 304

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
             +        +       A +           F +    
Sbjct: 305 LTEYFKDTTFRVFQAPYVGAVVMPGGGSQPRRTFDKWQEW 344



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P+    + +  DP       +++     E+      +     Q   F          
Sbjct: 462 FTSPKPEWVDSFDKDPGNALAYAYDIVCNGNEIGGGSIRIHRRDIQNRVFNVMGI----G 517

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   G+A G+DR+V L+T +++I +VI  P
Sbjct: 518 EEEAQTQFGFLLDAFKYGAPPHGGVAFGWDRIVSLLTKSDSIRDVIAFP 566


>gi|163814884|ref|ZP_02206272.1| hypothetical protein COPEUT_01035 [Coprococcus eutactus ATCC 27759]
 gi|158449823|gb|EDP26818.1| hypothetical protein COPEUT_01035 [Coprococcus eutactus ATCC 27759]
          Length = 605

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 64/190 (33%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ ++ +    R++  +  F+EI++  L   +P     ++            
Sbjct: 141 RRPDLQRNLMMKSKVAGIARQFMADEGFLEIETPMLTKSTPEGARDYLVPSRVHPGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQLFKQLLMCSGYDRYFQIARCFRDEDLRADRQPEFTQMDMELSFVDVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                    + +T  EA  R+   D        + 
Sbjct: 255 VIDVNERLLAKLFKEVLDLDIQ---------LPIQRMTWQEAMDRF-GSDKPDLRFGLEL 304

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 305 KDVSDIVKDC 314



 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+  G+   ++  +  I    L+E  +              P  E         
Sbjct: 415 ALRCHLAELMGLVDKNEFRFVWITEFPLLEWSDEENRFTAMHHPFTMPMEEDLQYIDSDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K +     +      L    
Sbjct: 475 GRVRAKAYDIVLNGNEIGGGSVRIHQNDVQEKMFECLGFTKAQ----AHERFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLVMLMAKQDSIRDVIAFPKVK 566


>gi|237744013|ref|ZP_04574494.1| aspartyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229431242|gb|EEO41454.1| aspartyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 592

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +  S+R Y  +  F+++D+  L   +P      +    T       
Sbjct: 136 RRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGARDFLVPSRTNPGTFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDIEMSFVEKED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           + +  AEA  R+   D        + 
Sbjct: 250 VMNEIEGLAKYVFKNVTGEEANYT---------FQRMPYAEAMDRF-GSDKPDLRFGVEL 299

Query: 192 PD 193
            D
Sbjct: 300 KD 301



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 24/170 (14%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    D  +  +    + +  E           + +P       ++   
Sbjct: 411 ALRLKIGKDLDLINKDDFKFLWVVDFPMFDYDEEE----QRYKAEHHPFTSIKAEDLDKF 466

Query: 255 DPRFTKR-----FELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPI 305
               T+      ++L     E+      + +P  Q   F++    + + K K        
Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFG------ 520

Query: 306 DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
              FL       P   G+A G DR +M++    +I +VI  P  ++N+ +
Sbjct: 521 --FFLDAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFP--KTNKGQ 566


>gi|188588113|ref|YP_001920365.1| aspartyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
 gi|238689665|sp|B2V351|SYD_CLOBA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188498394|gb|ACD51530.1| aspartyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
          Length = 599

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 62/182 (34%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+    S+R+Y  +N F+++++  L   +P     ++          ++
Sbjct: 139 RRPDMHRIFEIRSKTTKSIRDYLEKNDFLDVETPMLTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    + 
Sbjct: 193 PGMFYALPQSPQIFKQLLMVSGFDKYYQIVKCFRDEDLRANRQPEFTQVDMELSFVEQDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                    + +T  +A  +Y   D        + 
Sbjct: 253 IMALNEGLIAHVFKEVAGVDVK---------LPIKRMTFKDAMEKY-GSDKPDLRFGMEI 302

Query: 192 PD 193
            +
Sbjct: 303 TN 304



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 51/153 (33%), Gaps = 9/153 (5%)

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
           L L  Q   I+  ++  ++ I    L E  E       C      P  E           
Sbjct: 415 LELAKQFELIKDKNEFNFTWITEFPLFEYSEEEERYTACHHPFTAPMEEDLDFLESAPGK 474

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--TYPIDEDFLACLT 314
             +K ++L     EL      + D   Q+  F      K   + E   +      L    
Sbjct: 475 VRSKAYDLVLNGEELGGGSIRIHDMELQQRMF------KALGFTEEQAWERFGFLLQAFK 528

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DR++M + G  NI +VI  P
Sbjct: 529 FGPPPHGGLAFGLDRMIMFLAGTENIKDVIAFP 561


>gi|154149426|ref|YP_001405899.1| aspartyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166225334|sp|A7I058|SYD_CAMHC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|153805435|gb|ABS52442.1| aspartyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 584

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 73/210 (34%), Gaps = 9/210 (4%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
              R+    + R       F+E+++  L   +P     ++            + +     
Sbjct: 140 FFTRSKAAIAARNALDRLGFVEVETPILTRATPEGARDYLVPSRVYNGQFYALPQ----- 194

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+ +  +K F  A  +R+ +     QPEFT ++   +    + +MK    +
Sbjct: 195 -SPQLFKQLLMCSCFDKYFQIARCFRDEDLRADRQPEFTQIDIEMSFCDQKDVMKVGEAV 253

Query: 140 IRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++   +   + I + F+ +      E       +       ID+    +         + 
Sbjct: 254 LKDIFKSCGKDIKTPFRVMQYKDAMENYGSDKPDLRFGMKFIDVADIFEKSSNEIFANIA 313

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              ++  ++    +     FS+  +++ E 
Sbjct: 314 KDKKKNRVKAIKVEGGDLKFSKRQMQRFEE 343



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    IEL      +     Q   F
Sbjct: 436 EQNEDGTYSAMHHPFTMPNNVDEPDIEEITSIAYDVVLNGIELGGGSIRIHKEDIQEKVF 495

Query: 289 E----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           +    +  ++++K            L  L+   P   GIA+GFDRL+MLVT +++I +VI
Sbjct: 496 KLLKIEPAEQREKFG--------FLLDALSFGAPPHGGIAIGFDRLMMLVTRSSSIRDVI 547

Query: 344 WTP 346
             P
Sbjct: 548 AFP 550


>gi|166031158|ref|ZP_02233987.1| hypothetical protein DORFOR_00844 [Dorea formicigenerans ATCC
           27755]
 gi|166029005|gb|EDR47762.1| hypothetical protein DORFOR_00844 [Dorea formicigenerans ATCC
           27755]
          Length = 596

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 60/178 (33%), Gaps = 17/178 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ + +  R++     F+EI++  L   +P     ++            
Sbjct: 141 RRPDMQRNLMMRSKVATLARQFMANEGFLEIETPVLIGSTPEGARDYLVPSRVHQGHFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQPEFTQMDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           ++      +    +                      +T  EA  RY +    T     
Sbjct: 255 VIDVNERFLAMLFKEVLGVEVP---------LPIPRMTWQEAMDRYGSDKPDTRFGME 303



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 17/162 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q  +   ++  +  I    L+E  E              P  E         
Sbjct: 415 ALRLELARQMDLLDKNEYKFMWITEFPLLEWSEEQNRFTAMHHPFTMPMEEDLQYIDSDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                K +++     E+      + +P  Q   FE      ++ QE+             
Sbjct: 475 GRVRAKAYDITLNGNEIGGGSVRIFNPEIQSKMFEVLGFTPEQAQEQFG----------F 524

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            L      +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 525 LLTAFKYGVPPHAGLAYGLDRLVMLMAKQDSIRDVIAFPKVK 566


>gi|330444099|ref|YP_004377085.1| aspartyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807209|gb|AEB41382.1| aspartyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 584

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 55/431 (12%), Positives = 99/431 (22%), Gaps = 108/431 (25%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRK--- 74
             L+ R+ +  + R Y     FIE+ +  L + +P     ++            + +   
Sbjct: 142 DRLICRHQVMLACRSYMHSQGFIEVVTPVLGKSTPEGARDYLVPSRIYPGKFYALPQSPQ 201

Query: 75  -----------PLYLQTSPEF------------SCKKLLAAGEEKIFCFAHAWRN----- 106
                        Y Q +  F              +  +                     
Sbjct: 202 LFKQLLMIGGLDRYFQIATCFRDEDLRADRQPEFAQIDIEMSFGDPQDLFPIIEELIVEL 261

Query: 107 ------------GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI-----IRCAAEVANQ 149
                                +F   +                       I         
Sbjct: 262 FAVKGIKISLPLPRMTYQDAKDFYGTDKPDLRFDLRLKDCRKHAERFSFSIFLDQLAQGG 321

Query: 150 KIFSFQNVNCNPFSEPEYITVAEAFARYA-----------------------NIDLGTTL 186
           KI  F        S  +     E   RY                                
Sbjct: 322 KIKGFCVPGGADISRKQLDIYTEFVKRYGAMGLVWIKKQEGGISSNVAKFASEEVFNAMF 381

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP---- 242
           +  +  D+ +L L A Q  +     D      ++      E          +  +P    
Sbjct: 382 EEFEAKDQDMLLLIAAQESVANQALDHLRRRIAKERQLYDETQYNF---VWITDFPLFSL 438

Query: 243 ------APESALANIYPADPRFTKR---------FELYACNIELCNACDELLDPIEQRHR 287
                 +           D    +          ++L     E+ +    + +   Q   
Sbjct: 439 EDGQLSSEHHPFTAPLEEDIPLLEDSPLSVRSSSYDLVLNGYEIASGSQRIHNADLQSKI 498

Query: 288 FEKE----MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           F          K+K           F+  L+   P   GIA+G DR+VM++T A  I EV
Sbjct: 499 FTLLKMSPESIKEKFG--------FFIEALSFGTPPHLGIALGLDRIVMVLTQAEGIREV 550

Query: 343 IWTPFSQSNQE 353
           I  P +Q   +
Sbjct: 551 IAFPKTQKAAD 561


>gi|313892012|ref|ZP_07825613.1| aspartate--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119655|gb|EFR42846.1| aspartate--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 599

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 69/188 (36%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R+ I  ++REY  ++ ++EI++  L   +P     ++            
Sbjct: 140 RRPEMLNHLIMRHKIVHNIREYMNKHGYLEIETPILTKSTPEGARDYLVPSRVNPGEFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G EK F  A  +R+ +     QPEFT L+   + E  E 
Sbjct: 200 LPQ------SPQLFKQLLMVSGVEKYFQIARCFRDEDLRADRQPEFTQLDIEVSFEDQEY 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++             + +N +     + I   +A   Y +       D    
Sbjct: 254 ILSLMERMMQ---------QLFKEILNIDVPVPFKRIKWDDAMNLYGSDKPDLRFDMHFY 304

Query: 192 PDRHLLYL 199
               LL  
Sbjct: 305 DVTDLLRE 312



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 51/160 (31%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +   ++  +  +    + E  E              P  E         
Sbjct: 414 ELRLEMARRRNLINENEFCFRWVTDFPMFEYNEDEKRYVAEHHPFTAPRDEDIQYLKTDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
              + K +++     E+      +  P  Q+  FE           E        L    
Sbjct: 474 SKVYAKAYDMVLNGTEIGGGSLRIYQPELQKQVFEAIGLS----DEEAEERFGFLLEAFQ 529

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DRLVML+    +I +VI  P +QS  +
Sbjct: 530 YGAPPELGIAFGLDRLVMLMLKCKSIRDVIAFPKTQSAID 569


>gi|71911626|ref|YP_283176.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|71854408|gb|AAZ52431.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 582

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +   +   +      +           +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T+       +      A +   ++   D        ++   
Sbjct: 296 LQDLTVTVKGNDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEF 340



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 402 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 462 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|17229928|ref|NP_486476.1| aspartyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|24212410|sp|Q8YUB6|SYD_ANASP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|17131528|dbj|BAB74135.1| aspartate--tRNA ligase [Nostoc sp. PCC 7120]
          Length = 595

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 71/207 (34%), Gaps = 16/207 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
              R    +  R+ +  ++R Y  +   FIE+++  L   +P      R +     +   
Sbjct: 136 RRDRMARNIQLRHQVVKAMRRYLEDVEGFIEVETPILTRSTPEGA---RDYVLPSRVN-- 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E+
Sbjct: 191 PGEWFALPQSPQLFKQILMVSGLDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSEEE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +                      +T AEA  RY      T  D    
Sbjct: 251 IIELNEKLVSYIFKTVKGVELP---------LPFPRLTYAEAMERYGCDKPDTRYDLQLV 301

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
               ++     +       +     I 
Sbjct: 302 NVSDVMKDSGFKVFRDAVANGGIVKIL 328



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 49/158 (31%), Gaps = 19/158 (12%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+          +    + E       +        +P       +++  
Sbjct: 417 RLRQAIAKEFGLIDPDKINLLWVVDFPMFEWNADEKRLEAL----HHPFTAPHPDDLHDL 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                + ++L     E+      +     Q   FE      +E Q K     E +     
Sbjct: 473 KTARAQAYDLVFNGFEVGGGSRRIYQREVQEQVFETIGLSPEEAQNKFGFLLEAFE---- 528

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   GIA G DRLVML  G  +I +VI  P
Sbjct: 529 -----YGTPPHGGIAYGLDRLVMLFAGEESIRDVIAFP 561


>gi|145219859|ref|YP_001130568.1| aspartyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|189082135|sp|A4SF07|SYD_PROVI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145206023|gb|ABP37066.1| aspartyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 602

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 18/183 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ + S++R Y  E  F+EI +  L   SP      R F     +    
Sbjct: 146 RREKIHENIIFRSRVSSAIRRYLEERDFVEIQTPILTSSSPEG---ARDFLVPSRLH--- 199

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ AG  + F  A  +R+ +      P EF  L+   A    +
Sbjct: 200 PGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQLDMEMAFIEQD 259

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            L +    + R      ++K  +              I+  +   R+   D        +
Sbjct: 260 DLFEILEGMFRHLVTSMSKKRIT--------AFPFPRISYRDVMNRF-GTDKPDLRIPLE 310

Query: 191 QPD 193
             D
Sbjct: 311 IAD 313



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 49/146 (33%), Gaps = 5/146 (3%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
             + ++  I    + E  E    I+        P  E               ++++    
Sbjct: 434 HDELSFCWIVDFPMYEYNEEAGKIDFSHNPFSMPQGEMEALETMDPLELLAYQYDIVCNG 493

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFD 327
           IEL +       P      FE     K+ +      +    +       P   GIA G D
Sbjct: 494 IELSSGAIRNHRPDIMYRAFEIAGYSKEDVDLRFGHM----IEAFKLGAPPHGGIAPGLD 549

Query: 328 RLVMLVTGANNINEVIWTPFSQSNQE 353
           RLVM++    NI EVI  P +Q  ++
Sbjct: 550 RLVMILRDEQNIREVIAFPMNQQAED 575


>gi|34762827|ref|ZP_00143813.1| Aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887529|gb|EAA24613.1| Aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 592

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +  S+R Y  +  F+++D+  L   +P      +    T       
Sbjct: 136 RRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGARDFLVPSRTNPGTFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDIEMSFVEKED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           + +  AEA  R+   D        + 
Sbjct: 250 VMNEIEGLAKYVFKNVTGEEANYT---------FQRMPYAEAMDRF-GSDKPDLRFGVEL 299

Query: 192 PD 193
            D
Sbjct: 300 KD 301



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 24/170 (14%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    D  +  +    + +  E           + +P       ++   
Sbjct: 411 ALRLKIGKDLELINKDDFKFLWVVDFPMFDYDEEE----QRYKAEHHPFTSIKAEDLDKF 466

Query: 255 DPRFTKR-----FELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPI 305
               T+      ++L     E+      + +P  Q   F++    + + K K        
Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQKEAKAKFG------ 520

Query: 306 DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
              FL       P   G+A G DR +M++    +I +VI  P  ++N+ +
Sbjct: 521 --FFLDAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFP--KTNKGQ 566


>gi|326798552|ref|YP_004316371.1| aspartyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326549316|gb|ADZ77701.1| aspartyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 583

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 66/173 (38%), Gaps = 19/173 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L+ R+ +  ++R +  +  F+E+++  L   +P      R F     + + 
Sbjct: 131 LRRNPVRNNLVLRHQMAQAVRSFLDQQGFLEVETPVLIKSTPEG---ARDFVVPSRMNE- 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   A    E 
Sbjct: 187 -GQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           ++     +I    +                  +   +T A+A   Y +    T
Sbjct: 246 ILNLFEELISYLFKKVKNVEIG----------KLPRMTYADAMRLYGSDKPDT 288



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 15/171 (8%)

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           D      Q  +  + + +     D  ++     +     +       RY A      +  
Sbjct: 393 DADKTRKQLNELRLELGNQLGLRDK-NKFSALWVVDFPLLEWDDDTKRYHAMHHPFTSPK 451

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQ----RHRFE---KEMQEKKKIY--NETY 303
           P D                 NA D +++  E        FE   +++  K   +   E  
Sbjct: 452 PEDIALLDTAP----GDVRANAYDMVINGTEVGGGSIRIFEKDLQQLMFKHLGFTQEEAQ 507

Query: 304 PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 +       P   GIA GFDRLV +  G ++I +VI  P + + ++
Sbjct: 508 TQFGFLMDAFTYGAPPHGGIAFGFDRLVSIFAGLDSIRDVIAFPKNNAGRD 558


>gi|257416406|ref|ZP_05593400.1| aspartyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257158234|gb|EEU88194.1| aspartyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|315147633|gb|EFT91649.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 589

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 46/146 (31%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    L E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVARLAIDPASVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   FE     K+    E        L  L    P   
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKE----EAQDQFGFLLDALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DRL ML+ G  NI EVI  P
Sbjct: 531 GIALGLDRLAMLLAGEENIREVIAFP 556



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 21/178 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP     +  R+ +  ++R Y   + F++I++  L + +P     ++            
Sbjct: 135 RRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQIDIETTFLTPEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           +     N++    +       S              ++  EA ARY +    T     
Sbjct: 249 IQTYTENMLAEVMKETKGIEIS---------VPFPRMSYDEAMARYGSDKPDTRFAME 297


>gi|225552077|ref|ZP_03773017.1| aspartyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371075|gb|EEH00505.1| aspartyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 586

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E     +    +   P  +         
Sbjct: 405 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYSPAHHMFSLPKKQYIANLEKNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +EL +    + +   Q+  F     +K+K  +        FL  L 
Sbjct: 465 KKTIGEIYDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSED----RFGFFLKALE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 521 YGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 74/209 (35%), Gaps = 8/209 (3%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY-LQ 79
           ++ R      +R + ++ +F+E+++ +    +P      R F     I    +   Y L 
Sbjct: 139 IILRCQATHLIRNFLIKRKFLELETPTFVKSTPEG---ARDFVVPSRIH---KGSFYALP 192

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E + K   N+
Sbjct: 193 QSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKENIFKLIENM 252

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +    +         +                +   R+       + +  +         
Sbjct: 253 LFLIFKNCININLPKKFKKITYKKAMNKYGSDKPDTRFELELQDISRNLKNSEFNIFKDT 312

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +  I++      +D FSR  I  +E 
Sbjct: 313 LKNKGSIKILIVKDKADKFSRTKINNLEE 341


>gi|115374727|ref|ZP_01462004.1| aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|310822725|ref|YP_003955083.1| aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115368298|gb|EAU67256.1| aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309395797|gb|ADO73256.1| Aspartyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 607

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 56/158 (35%), Gaps = 9/158 (5%)

Query: 201 AQQAGIRVAHD----DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
           A++ G+   +       +  + +  L E  E +            P        +     
Sbjct: 425 AKKLGLIPEYGSGGNWRFLWVVNPPLFEYDEESKTWAAAHHAFTRPHDGDVEYLLTDPGR 484

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
               R+++     E+      L DP  Q   F+    E      E        L  L   
Sbjct: 485 VKCHRYDVVLNGFEIGGGSIRLHDPKVQAEVFKALGIE----EEEARMKFGFLLDALKYG 540

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   GIA+G DRLVML+T A ++ +VI  P +++  +
Sbjct: 541 APPHGGIALGMDRLVMLLTSAESLRDVIPFPKTKTGTD 578



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 76/206 (36%), Gaps = 20/206 (9%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDH 71
            RR+P    L+ R+ + +  R Y VEN F+E+++  + +Y+PG   +   F     +   
Sbjct: 139 LRRKPLQQSLMTRSKMNALTRAYMVENGFLELETPFMGKYTPGGARN---FLVPSRLN-- 193

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   +  + AG ++ F     +R+ +     QPEFT ++   +  + +
Sbjct: 194 -PGKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDEDLRLDRQPEFTQIDVEMSFVTQD 252

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      +I+   +                 +    +   E+ A+Y N           
Sbjct: 253 DIFTIIEGLIQKLWKEVLGVDVP---------TPFMRMNFDESMAKYGNDKPDLRFGLEH 303

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSD 216
                L+    +  G+ +  +     
Sbjct: 304 IVLTDLIREHGEGGGVPLIWEAVQHK 329


>gi|323128234|gb|ADX25531.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 582

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 70/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +      +           +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMITKVMKETKGIDVTLPFPRMSYDVAMNSYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T        +      A +   ++   D        ++   
Sbjct: 296 LQDLTETVKGIDFKVFSEAPAVKAIVVKENADRYSRKDIDKLTEF 340



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 402 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 462 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|254584564|ref|XP_002497850.1| ZYRO0F14938p [Zygosaccharomyces rouxii]
 gi|238940743|emb|CAR28917.1| ZYRO0F14938p [Zygosaccharomyces rouxii]
          Length = 655

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 49/144 (34%), Gaps = 10/144 (6%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL--ANIYPADPRFT--KRFE 263
              D        +      E             +P     +        +P     + ++
Sbjct: 487 WIKDFPLFSPVEKESSNNFEYPEYEEDRVESSHHPFTMVQIRDYAKLGTNPTQALGQHYD 546

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           L    +EL      + DP  Q + FE+ ++ K     E + +    L       P  +G 
Sbjct: 547 LVVNGVELGGGSTRVHDPQLQEYIFEEILKIK-----EPHKVFGHLLEAFKMGTPPHAGF 601

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A+GFDR+  ++ G  +I +V+  P
Sbjct: 602 AIGFDRMCAMLCGTESIRDVMAFP 625



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 84/260 (32%), Gaps = 11/260 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +    + + FL  R  +  +LR+ F E  F EI++  L + +P      R F 
Sbjct: 160 PPEYRYLQLRLPKFQQFLQTRYQLSKALRQKFDELGFTEIETPILFKSTPEGA---REFL 216

Query: 64  TELIIQDHIRKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                     +P +  L  SP+   + L+A+G  + F  A  +R+ +     QPEFT L+
Sbjct: 217 VPTRRTTTDEEPTFYALPQSPQQYKQLLMASGINRYFQVAKCFRDEDLRADRQPEFTQLD 276

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEV----ANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
              A  + E +M+     +    +               V  +      +++  +A ++Y
Sbjct: 277 LEMAFANGEDVMQSVEEAVTFVWKKLSRGLYTLDIQGNVVPVSESQPVRHMSYRQAMSQY 336

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAG-IRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
                     +    D               +       + F        + +   N   
Sbjct: 337 GIDKPDLCAPDLKILDLSEFRALGNSDKSFPIFEVLILRNAFDDKKDFNKKWSFLKNPEH 396

Query: 237 ILDRYPAPESALANIYPADP 256
              R P     L     +  
Sbjct: 397 YNYRTPKVVPILNEQDKSQW 416


>gi|169831069|ref|YP_001717051.1| aspartyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637913|gb|ACA59419.1| aspartyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 601

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+    ++R++     F EI++  L   +P     ++            
Sbjct: 141 RRPEMQRTLEFRHRAAKAVRDFLDSRGFWEIETPFLTRSTPEGARDYLVPSRLNPGKFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ F     +R+ +     QPEFT ++   +      
Sbjct: 201 LPQ------SPQLFKQLLMVSGCERYFQIVRCFRDEDLRADRQPEFTQIDLEMSFVDSGD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++                           IT A+A  R+   D        + 
Sbjct: 255 VMALVEEMVAALYRETTGVELE---------IPFPRITYADAMDRF-GTDKPDLRYGMEL 304

Query: 192 PD 193
            D
Sbjct: 305 HD 306



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 52/158 (32%), Gaps = 11/158 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+     + +  +    L+E  E              P  E              
Sbjct: 419 LAERLGLIDRSRNEFVWVREFPLLEYDEDEKRFVAVHHPFTAPVEEDIALLTVEPARVRA 478

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-E 315
           + ++L    +E+      +     Q   F         I  E   + E F   L      
Sbjct: 479 RAYDLVLNGVEIGGGSIRIHRRDVQELVF-------SAIGLEPGEVKEKFGFLLEAFEYG 531

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A+GFDRLVML  G   I +V+  P +QS  +
Sbjct: 532 TPPHGGFAVGFDRLVMLAAGKQTIRDVMAFPKTQSGTD 569


>gi|57167666|ref|ZP_00366806.1| aspartyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020788|gb|EAL57452.1| aspartyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 567

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 76/231 (32%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 103 NEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKATPEGARDY 162

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 163 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 216

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++      ++   +   ++    F+ +      E       +     
Sbjct: 217 QIDVEMSFCEQKDVIATAETFLKDIFKACGKEIQIPFRQMPYKEAMENYGSDKPDLRFDL 276

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +   +++  ++         IFS+  +++ E 
Sbjct: 277 KLIDVIDIFAKSNNEIFANIAKDSKKNRVKALRVPKGDTIFSKRQMQRFEE 327



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +  +++    +EL      +     Q+  F
Sbjct: 420 EQNDDGSYSAMHHPFTMPKNIDEADLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVF 479

Query: 289 ------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINE 341
                 E++ +EK              L  L+   P   GIA+G DRL+MLVTGAN+I E
Sbjct: 480 KLLNIDEEQQKEKFG----------FLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIRE 529

Query: 342 VIWTP 346
           VI  P
Sbjct: 530 VIAFP 534


>gi|256845828|ref|ZP_05551286.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719387|gb|EEU32942.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 592

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +  S+R Y  +  F+++D+  L   +P      +    T       
Sbjct: 136 RRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGARDFLVPSRTNPGTFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDIEMSFVEKED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           + +  AEA  R+   D        + 
Sbjct: 250 VMNEIEGLAKYVFKNVTGEEANYT---------FQRMPYAEAMDRF-GSDKPDLRFEVEL 299

Query: 192 PD 193
            D
Sbjct: 300 KD 301



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 24/170 (14%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    D  +  +    + +  E           + +P       ++   
Sbjct: 411 ALRLKIGKDLDLINKDDFKFLWVVDFPMFDYDEEE----QRYKAEHHPFTSIKAEDLDKF 466

Query: 255 DPRFTKR-----FELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPI 305
               T+      ++L     E+      + +P  Q   F++    + + K K        
Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFG------ 520

Query: 306 DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
              FL       P   G+A G DR +M++    +I +VI  P  ++N+ +
Sbjct: 521 --FFLDAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFP--KTNKGQ 566


>gi|332364047|gb|EGJ41825.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 584

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIDVS---------LPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTDLVKGVDFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 46/156 (29%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +S        
Sbjct: 402 ALRVRLAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQGLEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                  +++     EL      +     Q   F       K +        E F   L 
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERMF-------KALGFSAQEAAEQFGFLLE 514

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 515 AMDYGFPPHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|295114803|emb|CBL35650.1| Aspartyl-tRNA synthetase [butyrate-producing bacterium SM4/1]
          Length = 401

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 67/191 (35%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ + +  R +  E  F+EI++ +L   +P     ++            
Sbjct: 141 RRPDLQKNLMTRSRVTTLTRAFLAEEGFLEIETPTLIKSTPEGARDYLVPSRVHPGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++         K    +    +     + +T  EA  R+   D        + 
Sbjct: 255 VLDVNERLL---------KKLFKEICGFDLQLPIQRMTWREAMDRF-GSDKPDLRFGMEL 304

Query: 192 PDRHLLYLQAQ 202
            +        Q
Sbjct: 305 KNVSETVKDCQ 315


>gi|225386911|ref|ZP_03756675.1| hypothetical protein CLOSTASPAR_00659 [Clostridium asparagiforme
           DSM 15981]
 gi|225046923|gb|EEG57169.1| hypothetical protein CLOSTASPAR_00659 [Clostridium asparagiforme
           DSM 15981]
          Length = 597

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 71/196 (36%), Gaps = 18/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ + +  R +  +  F+EI++ +L   +P     ++            
Sbjct: 141 RRPDLQRNMMVRSRVATLTRAFLADEGFLEIETPTLIKSTPEGARDYLVPSRVHPGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    ++
Sbjct: 201 LPQ------SPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQPEFTQIDMELSFVDVDE 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++   +            + +       +T  EA  R+   D        + 
Sbjct: 255 VLDVNERLLQKLFKEI---------CDYDLPLPLPRMTWQEAMDRF-GSDKPDLRFGMEL 304

Query: 192 PDRHLLYLQAQQAGIR 207
            +   +    + A  +
Sbjct: 305 QNVSEVVKGCEFAVFK 320



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 55/158 (34%), Gaps = 9/158 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  +    D  +  +    L+E  E              P  E         
Sbjct: 415 NLRLELARQLDLLKKDDFKFLWVTEFPLLEYSEEEGRFMAMHHPFTMPMDEDLQYIDSDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                K +++    +E+      +     Q   FE         +      D+    L  
Sbjct: 475 GRVRAKAYDIVLNGVEMGGGSVRIHQGDVQSKMFEV------LGFTPERANDQFGFLLEA 528

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
               +P  +G+A GFDR+VML+ GA++I +VI  P  +
Sbjct: 529 FKYGVPPHAGLAYGFDRMVMLMVGADSIRDVIAFPKVK 566


>gi|46198667|ref|YP_004334.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55980680|ref|YP_143977.1| aspartyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|549026|sp|P36419|SYD_THETH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287575|sp|Q72KH6|SYD_THET2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|66773800|sp|Q5SKD2|SYD_THET8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|420805|pir||S33743 aspartate-tRNA ligase (EC 6.1.1.12) - Thermus aquaticus
 gi|9257069|pdb|1EFW|A Chain A, Crystal Structure Of Aspartyl-Trna Synthetase From Thermus
           Thermophilus Complexed To Trnaasp From Escherichia Coli
 gi|9257070|pdb|1EFW|B Chain B, Crystal Structure Of Aspartyl-Trna Synthetase From Thermus
           Thermophilus Complexed To Trnaasp From Escherichia Coli
 gi|12084697|pdb|1G51|A Chain A, Aspartyl Trna Synthetase From Thermus Thermophilus At 2.4
           A Resolution
 gi|12084698|pdb|1G51|B Chain B, Aspartyl Trna Synthetase From Thermus Thermophilus At 2.4
           A Resolution
 gi|20151171|pdb|1L0W|A Chain A, Aspartyl-Trna Synthetase-1 From Space-Grown Crystals
 gi|20151172|pdb|1L0W|B Chain B, Aspartyl-Trna Synthetase-1 From Space-Grown Crystals
 gi|396501|emb|CAA50282.1| aspartyl-tRNA synthetase [Thermus thermophilus]
 gi|46196290|gb|AAS80707.1| aspartyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|55772093|dbj|BAD70534.1| aspartyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 580

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 51/156 (32%), Gaps = 8/156 (5%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD-RYPAPESALANIYPADPRF 258
            A   G++         +   +L    E              +P     L          
Sbjct: 407 AADLLGLKREGFRFLWVVDFPLLEWDEEEEAWTYMHHPFTSPHPEDLPLLE--KDPGRVR 464

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
              ++L    +E+      + DP  Q   F    +       E       FL  L    P
Sbjct: 465 ALAYDLVLNGVEVGGGSIRIHDPRLQARVF----RLLGIGEEEQREKFGFFLEALEYGAP 520

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              GIA G DRL+ L+TG+ +I EVI  P ++  ++
Sbjct: 521 PHGGIAWGLDRLLALMTGSPSIREVIAFPKNKEGKD 556



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 62/167 (37%), Gaps = 17/167 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  L  R+ +  ++ ++     F+++++  L   +P      R F      +  +    Y
Sbjct: 141 QENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEG---ARDFLVPYRHEPGL---FY 194

Query: 78  -LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   + L+ AG ++ F  A  +R+ +     QP+FT L+   +    E +++  
Sbjct: 195 ALPQSPQLFKQMLMVAGLDRYFQIARCFRDEDLRADRQPDFTQLDLEMSFVEVEDVLELN 254

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
             ++      A                    ++  EA  RY +    
Sbjct: 255 ERLMAHVFREALGVELP---------LPFPRLSYEEAMERYGSDKPD 292


>gi|153810160|ref|ZP_01962828.1| hypothetical protein RUMOBE_00541 [Ruminococcus obeum ATCC 29174]
 gi|149833339|gb|EDM88420.1| hypothetical protein RUMOBE_00541 [Ruminococcus obeum ATCC 29174]
          Length = 600

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 66/190 (34%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ ++ +    R++F +  F+E+++  L + +P     ++            
Sbjct: 141 RRPDLQRNLMMKSKVMMLTRKFFTDEGFLEVETPMLGKSTPEGARDYLVPSRIHPGSFYG 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLYKQLLMCSGYDRYIQIARCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      +    +            + +     + IT  EA  R+   D        + 
Sbjct: 255 VIDVNERFLAYLFKEVL---------DVDVKLPIQRITWQEAMDRF-GSDKPDMRFGMEL 304

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 305 HDVSEVVKDC 314



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 50/157 (31%), Gaps = 6/157 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
            L    A+Q  +   ++  +  +    +L    E N               +  L     
Sbjct: 415 ALRVELAKQMDLLDKNEYRFVWVTEFPLLEWSEEENRYTAMHHPFTMLMEEDIPLIESGD 474

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                 K +++     E+      +     Q   FE     K       Y      L   
Sbjct: 475 LGKIRAKAYDIVLNGNEIGGGSVRIHQNDIQEKMFEMLGFTKDA----AYKQFGFLLNAF 530

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 531 KYGVPPHAGLAYGLDRLVMLMAKVDSIRDVIAFPKVK 567


>gi|256964757|ref|ZP_05568928.1| aspartyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|307272838|ref|ZP_07554085.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|256955253|gb|EEU71885.1| aspartyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|306510452|gb|EFM79475.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 589

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 46/146 (31%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    L E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   FE     K+    E        L  L    P   
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKE----EAQDQFGFLLDALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DRL ML+ G  NI EVI  P
Sbjct: 531 GIALGLDRLAMLLAGEENIREVIAFP 556



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 68/188 (36%), Gaps = 22/188 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP     +  R+ +  ++R Y   + F++I++  L + +P     ++            
Sbjct: 135 RRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     Q EFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQLEFTQIDIETTFLTPEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     N++    +       S              ++  EA ARY   D   T    + 
Sbjct: 249 IQTYTENMLAEVMKETKGIEIS---------VPFPRMSYDEAMARY-GSDKPDTRFAMEL 298

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 299 IDVAEVVK 306


>gi|253699951|ref|YP_003021140.1| aspartyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511861|sp|C6E3W7|SYD_GEOSM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|251774801|gb|ACT17382.1| aspartyl-tRNA synthetase [Geobacter sp. M21]
          Length = 593

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 50/152 (32%), Gaps = 13/152 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A + G+   +   +  I    L+E  E              P  E              
Sbjct: 419 LAAKMGLTDPNVFRFVWITDFPLLEWDEEAKRWAAVHHPFTAPMDEDLQYVESDPGRCRA 478

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT- 314
           K ++L     E+      +     Q   F+     E   + K            L  L  
Sbjct: 479 KAYDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFG--------FLLDALEY 530

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DRL+ML+TG+++I +VI  P
Sbjct: 531 GTPPHGGIAFGLDRLMMLITGSDSIRDVIAFP 562



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 72/199 (36%), Gaps = 21/199 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  L+ R+ +    R Y  +N FIE+++  L   +P      R F     I    +   Y
Sbjct: 146 QQNLILRSKVAQLTRSYLSDNGFIELETPFLTKSTPEG---ARDFLVPSRIN---KGEFY 199

Query: 78  -LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E ++   
Sbjct: 200 ALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQPEFTQIDCEMSFIDREDIITVM 259

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             ++      A                  E +T  EA  R+  +D        +  +   
Sbjct: 260 EGLMARIFTEAKGVKVE---------LPIERMTYQEAIRRF-GVDNPDLRFGLELVE--- 306

Query: 197 LYLQAQQAGIRVAHDDTWS 215
           L    + +G +V  D    
Sbjct: 307 LSDIVKNSGFKVFADVVNG 325


>gi|256832591|ref|YP_003161318.1| aspartyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686122|gb|ACV09015.1| aspartyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 592

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 16/184 (8%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      R    L  R+ +  + R     + F+EI++ +L   +P      R F   
Sbjct: 125 RHRYLDLRRPRPAQLLKLRSQVSQAARRVLDTHDFVEIETPTLTRSTPEG---ARDFLVP 181

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
             +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +
Sbjct: 182 ARL--APGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDIEMS 239

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               + ++     ++     +             +  +    IT  EA  +Y +      
Sbjct: 240 FVEQDDVIALAEELLANIWALIG----------VDLTTPIPRITYHEAMRKYGSDKPDLR 289

Query: 186 LDNP 189
            D  
Sbjct: 290 FDLE 293



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       +++     E+      +     Q   F+         
Sbjct: 451 FTSPTPEWIDSFDTDPGHALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFQVMGI----G 506

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G+DR+V L+  A++I +VI  P
Sbjct: 507 EEEAQEKFGFLLDAFQFGAPPHGGIAFGWDRIVALLGRADSIRDVIAFP 555


>gi|15675898|ref|NP_270072.1| aspartyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|24212418|sp|Q99XL0|SYD_STRP1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13623134|gb|AAK34793.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
          Length = 582

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +   +   +      +           +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T+       +      A +   ++   D        ++   
Sbjct: 296 LQDLTVTVKGNDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEF 340



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 402 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 462 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|329121016|ref|ZP_08249647.1| aspartate--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471178|gb|EGF16632.1| aspartate--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 599

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 69/188 (36%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R+ I  ++REY  ++ ++EI++  L   +P     ++            
Sbjct: 140 RRPEMLNHLIMRHKIVHNIREYMNKHGYLEIETPILTKSTPEGARDYLVPSRVNPGEFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G EK F  A  +R+ +     QPEFT L+   + E  E 
Sbjct: 200 LPQ------SPQLFKQLLMVSGVEKYFQIARCFRDEDLRADRQPEFTQLDIEASFEDQEY 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++             + +N +     + I   +A   Y +       D    
Sbjct: 254 ILSLMERMMQ---------QLFKEILNIDVPVPFKRIKWDDAMNLYGSDKPDLRFDMHFY 304

Query: 192 PDRHLLYL 199
               LL  
Sbjct: 305 DVTDLLRE 312



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 51/160 (31%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +   ++  +  +    + E  E              P  E         
Sbjct: 414 ELRLEMARRRNLINENEFCFRWVTDFPMFEYNEDEKRYVAEHHPFTAPRDEDIQYLKTDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
              + K +++     E+      +  P  Q+  FE           E        L    
Sbjct: 474 SKVYAKAYDMVLNGTEIGGGSLRIYQPELQKQVFEAIGLS----DEEAEERFGFLLEAFQ 529

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DRLVML+    +I +VI  P +QS  +
Sbjct: 530 YGAPPELGIAFGLDRLVMLMLKCKSIRDVIAFPKTQSAID 569


>gi|325955285|ref|YP_004238945.1| aspartyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437903|gb|ADX68367.1| aspartyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 589

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 70/199 (35%), Gaps = 23/199 (11%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R+Y     F+E+++  L   +P      R F     +    
Sbjct: 133 RRNPVKDKLIFRSKVAQEVRKYLDAQDFVEVETPVLIKSTPEG---ARDFVVPSRMN--P 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   +    E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDI 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++                    +      F +   +T AEA  RY N             
Sbjct: 248 IEVFE----------GLTKHLLKTFKNLDFEQFPRMTYAEAMKRYGNDKPDIRFGM---- 293

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   +   AQ  G  V  D
Sbjct: 294 EFAEITDLAQGKGFSVFDD 312



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+R   +     +    L+E  +              P  E         
Sbjct: 404 ALRMEIGERLGLRKPDEFAPLWVVDFPLLEWDDETQRYYAMHHPFTSPKVEDYDLIKTNP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  ++L     E+      + D   Q   FE           E       FL    
Sbjct: 464 GEVRANAYDLVLNGNEIGGGSIRIFDRKLQAEMFE-----LLGFSPEQAEAQFGFLMNAF 518

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A GFDRLV ++ G+  I + I  P
Sbjct: 519 KYGAPPHGGLAFGFDRLVSILDGSETIRDYIAFP 552


>gi|293566141|ref|ZP_06678544.1| aspartyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291590067|gb|EFF21859.1| aspartyl-tRNA synthetase [Enterococcus faecium E1071]
          Length = 589

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              +    +  RN    ++R Y  +N F++I++  L + +P     ++            
Sbjct: 135 RRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETTFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +       +              +T  EA ARY   D   T  + + 
Sbjct: 249 IQTYTEGLIAKVMKEVRGIEVT---------MPFPRMTYDEAMARY-GSDKPDTRFDMEL 298

Query: 192 PD 193
            D
Sbjct: 299 ID 300



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 47/146 (32%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +      E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q    E     K+++  E +      L  L    P   
Sbjct: 475 YDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQM-EEQFG---FLLTALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DR  ML+ G +NI EVI  P
Sbjct: 531 GIALGLDRFAMLLAGEDNIREVIAFP 556


>gi|251780139|ref|ZP_04823059.1| aspartate--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084454|gb|EES50344.1| aspartate--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 599

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 62/182 (34%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+    S+R+Y  +N F+++++  L   +P     ++          ++
Sbjct: 139 RRPDMHRIFEIRSKTTKSIRDYLEKNDFLDVETPMLTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    + 
Sbjct: 193 PGMFYALPQSPQIFKQLLMVSGFDKYYQIVKCFRDEDLRANRQPEFTQVDMELSFVEQDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                    + +T  +A  +Y   D        + 
Sbjct: 253 IMALNEGLIAHVFKEVAGVDVK---------LPIKRMTFKDAMEKY-GSDKPDLRFGMEI 302

Query: 192 PD 193
            +
Sbjct: 303 TN 304



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 51/153 (33%), Gaps = 9/153 (5%)

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
           L L  Q   I+  ++  ++ I    L E  E       C      P  E           
Sbjct: 415 LELAKQFELIKDKNEFNFTWITEFPLFEYSEEEERYTACHHPFTAPMEEDLDFLESAPGK 474

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--TYPIDEDFLACLT 314
             +K ++L     EL      + D   Q+  F      K   + E   +      L    
Sbjct: 475 VRSKAYDLVLNGEELGGGSIRIHDMELQQRMF------KALGFTEEQAWERFGFLLQAFK 528

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DR++M + G  NI +VI  P
Sbjct: 529 FGPPPHGGLAFGLDRMIMFLAGTENIKDVIAFP 561


>gi|237742493|ref|ZP_04572974.1| aspartyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430141|gb|EEO40353.1| aspartyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 592

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +  S+R Y  +  F+++D+  L   +P      +    T       
Sbjct: 136 RRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGARDFLVPSRTNPGTFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDIEMSFVEKED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           + +  AEA  R+   D        + 
Sbjct: 250 VMNEIEGLAKYVFKNVTGEEANYT---------FQRMPYAEAMDRF-GSDKPDLRFGVEL 299

Query: 192 PD 193
            D
Sbjct: 300 KD 301



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 24/170 (14%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    D  +  +    + +  E           + +P       ++   
Sbjct: 411 ALRLKIGKDLELINKDDFKFLWVVDFPMFDYDEEE----QRYKAEHHPFTSIKAEDLDKF 466

Query: 255 DPRFTKR-----FELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPI 305
               T+      ++L     E+      + +P  Q   F++    + + K K        
Sbjct: 467 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFG------ 520

Query: 306 DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
              FL       P   G+A G DR +M++    +I +VI  P  ++N+ +
Sbjct: 521 --FFLDAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFP--KTNKGQ 566


>gi|108761988|ref|YP_632850.1| aspartyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108465868|gb|ABF91053.1| aspartyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 606

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 17/162 (10%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY----PAPESALANIYPADP 256
           A++ G+   +       F  ++   +              +    P  E     +     
Sbjct: 425 AKKLGLIPEYGSGGQWKFLWVVNPPLFEYDDETNTWAAAHHAFTRPHDEDVAYLLTDPGR 484

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLAC 312
               R+++     E+      L DP  Q   F+     +   + K            L  
Sbjct: 485 VKCHRYDVVLNGFEIGGGSIRLHDPKVQAEVFKALGISDEDARAKFG--------FLLDA 536

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   GIA+G DRL ML+TGA ++ +VI  P S++  +
Sbjct: 537 LKFGAPPHGGIALGMDRLAMLLTGAESLRDVIPFPKSKTGTD 578



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 79/219 (36%), Gaps = 18/219 (8%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDH 71
            RR P    L+ R+ + +  R Y V N F+E+++  + +Y+PG   +   F     +   
Sbjct: 139 LRRAPLQHSLMTRSKMNALTRSYMVGNGFLELETPFMGKYTPGGARN---FLVPSRLN-- 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             K   L  SP+   +  + AG ++ F     +R+ +     QPEFT ++   +  + + 
Sbjct: 194 AGKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDEDLRVDRQPEFTQIDVEMSFVTQDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++                     +    +   E+ A+Y N            
Sbjct: 254 IFTMIEGLLKKLWGEVLGIDIP---------TPFMRMDFYESMAKYGNDKPDLRFGLEHV 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
               L+    +  G+ +  +   +    + ++   E  +
Sbjct: 305 VLTDLIREHGEGGGVPMIWEAVQNKGIVKAMVVPAEKAM 343


>gi|97196950|sp|Q48QS8|SYD_STRPM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 582

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +   +   +      +           +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T+       +      A +   ++   D        ++   
Sbjct: 296 LQDLTVTVNGIDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEF 340



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 402 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 462 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKGNIREVIAFP 550


>gi|94989454|ref|YP_597555.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94993342|ref|YP_601441.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94542962|gb|ABF33011.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546850|gb|ABF36897.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 599

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 139 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 198

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 199 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 252

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +   +   +      +           +   R+  +
Sbjct: 253 DLETSFLSEQEIQDIVEGMIATVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEML 312

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T+       +      A +   ++   D        ++   
Sbjct: 313 LQDLTVTVKGIDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEF 357



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 419 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 478

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 479 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANAQFGFLLEA 532

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 533 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 567


>gi|332358865|gb|EGJ36687.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 584

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 73/226 (32%), Gaps = 21/226 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS--FQNVNCNPFSEPEYITVAEAFARYA 178
           +   +  S +++      +I    +       S  F  +  +       +   +      
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIEVSLPFPRMKYDDAMALYGVDKPDTRFEML 295

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
             DL   +   D           +   ++ A D        ++  +
Sbjct: 296 LQDLTEFVKGVDFKVFSEAPAV-KAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 46/156 (29%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  ES        
Sbjct: 402 ALRVRLAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKESEQELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                  +++     EL      +     Q   F       K +        E F   L 
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERMF-------KALGFSAQEATEQFGFLLE 514

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 515 AMDYGFPPHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|269119759|ref|YP_003307936.1| aspartyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613637|gb|ACZ08005.1| aspartyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 597

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 70/182 (38%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L KRN +  ++R+Y  +  F++ID+  L   +P      R F     I    
Sbjct: 134 RRTKMLNNLKKRNTMLKAIRDYLTDKGFLDIDTPVLAKATPEGA---RDFIVPSRIN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ AG +K +  A  +R+ +     QPEFT L+   +  + E 
Sbjct: 188 KGDFYALPQSPQLFKQILMVAGVDKYYQLAKCFRDEDLRADRQPEFTQLDIEMSFVTQED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++ +   + +   E    K   +             +   EA  RY   D   T    + 
Sbjct: 248 ILCEMEKMAKKVFEKVTGKKADYD---------FPRMDYYEAMDRY-GSDKPDTRFGLEL 297

Query: 192 PD 193
            D
Sbjct: 298 ID 299



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 9/156 (5%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP----APESALANIYPADPRF 258
           + G  +   +   D F  ++   +              +P      E         +   
Sbjct: 414 KVGNELDFINEEQDNFLWVIDFPMFEWSEEEERYKSTHHPFTAIKEEDKEFLNKNLEKIR 473

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
           T  +++     E+      + D   Q   FEK    K+    E       FL  L   +P
Sbjct: 474 TLSYDMVLNGYEIGGGSIRIHDSELQDVIFEKLGLSKE----EAEEKFGFFLNALRYGVP 529

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              GIA G DR +M +   ++I EVI  P +   Q+
Sbjct: 530 PHGGIAFGVDRWLMAMLKEDSIKEVIPFPKTNKGQD 565


>gi|308807226|ref|XP_003080924.1| COG0173: Aspartyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116059385|emb|CAL55092.1| COG0173: Aspartyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 621

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A+  G    +      +    + E  E              P  +  +AN        + 
Sbjct: 444 AKTYGFVPENAHAVLWVTEFPMFEYNEDEERYEAMHHPFTSPNQDDLMANPDDLSNARSI 503

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACL-TEMP 317
            ++L    +E+      +     Q   F      +       E        L       P
Sbjct: 504 AYDLVYNGVEIGGGSLRIYRRDIQEKVF------RAIGLSDAEAEEKFGYLLEAFQYGAP 557

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              G+A G DRLVM++ GA +I +VI  P + + Q
Sbjct: 558 PHGGLAFGLDRLVMMLAGAKSIRDVIAFPKTAAGQ 592



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 71/192 (36%), Gaps = 23/192 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVEN-QFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
           RRP     L  R+    +LR    ++  F+E+++  L   +P     ++     +     
Sbjct: 157 RRPQMARNLKLRHDTLRALRRVLEDDYGFLEVETPMLTRSTPEGARDYLVPSRLQPGGAY 216

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   A    +
Sbjct: 217 ALPQ------SPQLFKQMLMVAGVDRYYQVARCFRDEDLRADRQPEFTQLDIEMAFMDED 270

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +MK   +++R A             VN    +    +T AEA  +Y   D        +
Sbjct: 271 GVMKLAEDLMRAAF---------KNGVNVELPTSFPRMTYAEAMEKY-GSDKPDLRYGLE 320

Query: 191 QPDRHLLYLQAQ 202
                      +
Sbjct: 321 MSTLDDALNGCE 332


>gi|19746997|ref|NP_608133.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|56808428|ref|ZP_00366176.1| COG0173: Aspartyl-tRNA synthetase [Streptococcus pyogenes M49 591]
 gi|209560239|ref|YP_002286711.1| aspartyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|24212398|sp|Q8NZ20|SYD_STRP8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238064673|sp|B5XJ82|SYD_STRPZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19749253|gb|AAL98632.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|209541440|gb|ACI62016.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 582

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +   +   +      +           +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T+       +      A +   ++   D        ++   
Sbjct: 296 LQDLTVTVKGIDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEF 340



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 402 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 462 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|309810778|ref|ZP_07704584.1| aspartate--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308435258|gb|EFP59084.1| aspartate--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 675

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   +  R+ +  + R    E  F+EI++ +L   +P      R F     +    
Sbjct: 195 RRKDQGDAIRLRSKVSQAARAVLNERDFVEIETPTLTRSTPEG---ARDFLVPARL--AP 249

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 250 GSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDIEMSFVEQDDV 309

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++    I +                  +  +    +T A+A A+Y +        N    
Sbjct: 310 IELGEQIAKAVWATIG----------VDLPTPFPRMTYADAMAKYGSDKPDLRFGNELVE 359

Query: 193 DRHLLYL 199
                  
Sbjct: 360 CTEFFRD 366



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 17/116 (14%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF------EK 290
             +  P++   + +  +P       +++     E+      +     Q   F      E+
Sbjct: 515 HAFTMPKAEYVDTFDTEPGEALAYAYDMVCNGNEIGGGSIRIHRKDLQERVFKVMGLSEE 574

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + QEK     E +             P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 575 DAQEKFGFLLEAFSF---------GAPPHGGIAFGWDRIVSLLAGTDSIRDVIAFP 621


>gi|292559399|gb|ADE32400.1| putative AspRS [Streptococcus suis GZ1]
          Length = 553

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  I    + E  E              P  E+A       
Sbjct: 372 ALRNRLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDL 431

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +   + +      L  
Sbjct: 432 AQVRAVAYDIVLNGYELGGGSLRINQKDMQEQMF------KALGFSAEDAHEQFGFLLEA 485

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 486 MDYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFP 520



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 70/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 92  DTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 151

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 152 PSRVSKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 205

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  +  ++      +I    +       +             +    +   R+  +
Sbjct: 206 DLETSFLNEVEIQDIVEGLIAKVLKDTKGIDVTLPFPRMAYDHAMNFYGSDKPDTRFEML 265

Query: 181 DLGTTLDNPDQPDRHLLYL-QAQQAGIRVAHDDTWSDIFSRILIE 224
               T    +   +        +   ++ A D        ++   
Sbjct: 266 LQDLTELVKEVDFKVFSEAPVVKAIVVKGAADSYSRKDIDKLTDY 310


>gi|251783487|ref|YP_002997792.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242392119|dbj|BAH82578.1| aspartyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 582

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 70/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +      +           +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMITKVMKETKGIDVTLPFPRMSYDVAMNSYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T        +      A +   ++   D        ++   
Sbjct: 296 LQDLTETVKGIDFKVFSEAPAVKAIVVKENADRYSRKDIDKLTEF 340



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 402 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +   E        L  
Sbjct: 462 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTAEEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|195952842|ref|YP_002121132.1| aspartyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|229559871|sp|B4U7P3|SYD_HYDS0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|195932454|gb|ACG57154.1| aspartyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 594

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 71/188 (37%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  +  R+      R++F EN F EI++  L   +P      R F     +    
Sbjct: 134 RRPKFQKAIKTRSKALKITRDFFEENGFYEIETPFLIKSTPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT +++  +    + 
Sbjct: 188 PGKFYALPQSPQLFKQILMISGFDRYFQIARCFRDEDLRSDRQPEFTQIDFEMSFVEEQD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +               + ++    +  + IT  EA  RY   D   T    + 
Sbjct: 248 IMEISEKL---------LSKLFLELLDIELSTPFKRITYKEAMERY-GSDKPDTRFGLEL 297

Query: 192 PDRHLLYL 199
            D   ++ 
Sbjct: 298 VDLSDIFK 305



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 5/89 (5%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
            + +++    +E+      +     Q+  F+           E        L  L    P
Sbjct: 481 ARAYDIVLNGVEIGGGSIRIHKQDIQKLVFKILNIT----DEEAAMKFGFLLEALKYGAP 536

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              G+A GFDRL+ ++ G ++I +VI  P
Sbjct: 537 PHGGLAFGFDRLMAMMLGFDSIRDVIAFP 565


>gi|148377712|ref|YP_001256588.1| aspartyl-tRNA synthetase (aspartate-trnaligase) (AspRS) [Mycoplasma
           agalactiae PG2]
 gi|148291758|emb|CAL59147.1| Aspartyl tRNA synthetase (Aspartate tRNAligase) (AspRS) [Mycoplasma
           agalactiae PG2]
          Length = 567

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 67/202 (33%), Gaps = 18/202 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +L R  +   +R +  EN F+EI++ +L   +P      R F        + 
Sbjct: 125 RRPEMQKTILFRAKVMHEIRNFLYENDFVEIETPTLAKSTPEG---ARDFLV---GTRNK 178

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G EK +  A  +R+ +     QPEF  L+   +    E  
Sbjct: 179 GQFWALPQSPQLFKQLLMISGFEKYYQIARCYRDEDSRKDRQPEFVQLDIETSFLKVEDF 238

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            K    +++     A            N     + I  A+A   Y   D           
Sbjct: 239 HKTIEKLVKRIMLSAG----------VNVKIPFQKIKYADAIKDY-GSDKPDLRYEYKIT 287

Query: 193 DRHLLYLQAQQAGIRVAHDDTW 214
           D          A I+ A     
Sbjct: 288 DIDNFCADTDFAIIKDAKSKRI 309



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 51/152 (33%), Gaps = 17/152 (11%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
             +  ++ I    + E  E     +         A      +  P D      ++L    
Sbjct: 402 KDEYRFAWIVDWPMFEFNEDENKWDAAHHPFTRFAHNLDELDKLPIDKINAVAYDLVLNG 461

Query: 269 IELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
            E+      + D   Q   F      + + + K             FL      +P   G
Sbjct: 462 FEIAGGSARIYDKEMQEKMFNLIGLTKAQQESKFG----------WFLKAFDYGVPPHCG 511

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DRL+ML+T   +I +VI  P +  NQ+
Sbjct: 512 IAFGLDRLIMLLTKQKSIRDVIPFPKNSKNQD 543


>gi|323350720|ref|ZP_08086381.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123140|gb|EFX94831.1| aspartate--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 584

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A A Y  +
Sbjct: 236 DLETSFLSEQEIQDITEGLIARVMKETKGIEVS---------LPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTDLVKGVDFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 46/156 (29%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +S        
Sbjct: 402 ALRVRLAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                  +++     EL      +     Q   F       K +        E F   L 
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERMF-------KALGFSAQEAAEQFGFLLE 514

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 515 AMDYGFPPHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|238854669|ref|ZP_04644999.1| aspartate--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664388|ref|ZP_05865240.1| aspartyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932940|ref|ZP_06338337.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313472206|ref|ZP_07812698.1| aspartate--tRNA ligase [Lactobacillus jensenii 1153]
 gi|238832459|gb|EEQ24766.1| aspartate--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260561453|gb|EEX27425.1| aspartyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281302975|gb|EFA95180.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|313449094|gb|EEQ68590.2| aspartate--tRNA ligase [Lactobacillus jensenii 1153]
          Length = 610

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 72/227 (31%), Gaps = 14/227 (6%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQD 70
            RR   +  L+ R+ I +++ E+F    FI+I++  L + +P     ++           
Sbjct: 132 LRRSTLQRALITRSKITTAVHEFFDSEGFIDIETPDLGKSTPEGARDYLVPSRVYPGSFY 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    +
Sbjct: 192 ALPQ------SPQLFKQLLMGAGFDKYYQIARCFRDEDLRGDRQPEFTQIDMETSFLDEK 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      +++                         Y    +   R+            D
Sbjct: 246 GVQDITERLLQKVMHDVKGVDIKLPLPRITWNDAMNYYGSDKPDMRFDMKIQDLNEVFKD 305

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
              +      A    ++    +  +        +KIE          
Sbjct: 306 SDFKVFSGAIADGGFVKAIAVEGGAK---AYSRKKIEEKQEYIKRFH 349



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 49/152 (32%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A +  +    D  +  +    L E  E +            P  E          
Sbjct: 408 LRRSIAIELNMVSKDDYHFEWVVDWPLFEYDEGDDQWIAAHHPFTMPDDEGIKLLETEPH 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q    +     K+K     Y      L  L  
Sbjct: 468 KAHARSYDIILNGYELGGGSIRIHKKDIQLKMLKALGFTKEK----AYEQFGFLLDALDM 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A+G DR  ML+TG +NI +VI  P
Sbjct: 524 GFPPHAGLAIGLDRFAMLLTGKDNIRDVIAFP 555


>gi|256851203|ref|ZP_05556592.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260660627|ref|ZP_05861542.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934670|ref|ZP_06339913.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297206069|ref|ZP_06923464.1| aspartate--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256616265|gb|EEU21453.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548349|gb|EEX24324.1| aspartyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301245|gb|EFA93546.1| aspartate--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149195|gb|EFH29493.1| aspartate--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 610

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 72/227 (31%), Gaps = 14/227 (6%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQD 70
            RR   +  L+ R+ I +++ E+F    FI+I++  L + +P     ++           
Sbjct: 132 LRRSTLQRALITRSKITTAVHEFFDSEGFIDIETPDLGKSTPEGARDYLVPSRVYPGSFY 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    +
Sbjct: 192 ALPQ------SPQLFKQLLMGAGFDKYYQIARCFRDEDLRGDRQPEFTQIDMETSFLDEK 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      +++                         Y    +   R+            D
Sbjct: 246 GVQDITERLLQKVMHDVKGVDIKLPLPRITWNDAMNYYGSDKPDMRFDMKIQDLNEVFKD 305

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
              +      A    ++    +  +        +KIE          
Sbjct: 306 SDFKVFSGAIADGGFVKAIAVEGGAK---AYSRKKIEEKQEYIKRFH 349



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 49/152 (32%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A +  +    D  +  +    L E  E +            P  E          
Sbjct: 408 LRRSIAIELNMVSKDDYHFEWVVDWPLFEYDEGDDQWIAAHHPFTMPDDEGIKLLETEPH 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q    +     K+K     Y      L  L  
Sbjct: 468 KAHARSYDIILNGYELGGGSIRIHKKDIQLKMLKALGFTKEK----AYEQFGFLLDALDM 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A+G DR  ML+TG +NI +VI  P
Sbjct: 524 GFPPHAGLAIGLDRFAMLLTGKDNIRDVIAFP 555


>gi|282895988|ref|ZP_06304019.1| Aspartyl-tRNA synthetase [Raphidiopsis brookii D9]
 gi|281199098|gb|EFA73968.1| Aspartyl-tRNA synthetase [Raphidiopsis brookii D9]
          Length = 598

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 69/182 (37%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
              R    +  R+ +  ++R Y  +   FIEI++  L   +P      R +     + + 
Sbjct: 136 RRERMAKNIQLRHQVVKAMRRYLEDQEGFIEIETPVLTRSTPEG---ARDYILPSRVNE- 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E+
Sbjct: 192 -GQWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSEEE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +            + +       +   +A  +Y   D   T    + 
Sbjct: 251 IIQLNEKLVCHIFKTV---------QDIDLPHPFPRLRYQDAMHKY-GTDKPDTRYGLEL 300

Query: 192 PD 193
            D
Sbjct: 301 VD 302



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 42/135 (31%), Gaps = 15/135 (11%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
           F  I    +              +P       +++       + ++L     E+      
Sbjct: 436 FLWITEFPMFEWNANEKRLEALHHPFTAPHPDDLHDLKTARAQAYDLVLNGFEVGGGSLR 495

Query: 278 LLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVM 331
           +     Q   FE      +E + K     E +             P   GIA G DRLVM
Sbjct: 496 IYQREIQARVFETIGLSSEEARNKFGFLLEAFE---------YGTPPHGGIAYGVDRLVM 546

Query: 332 LVTGANNINEVIWTP 346
           L+    +I +VI  P
Sbjct: 547 LLAQEESIRDVIAFP 561


>gi|255994166|ref|ZP_05427301.1| aspartate--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993834|gb|EEU03923.1| aspartate--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 583

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 64/177 (36%), Gaps = 18/177 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPL 76
           +  L  R+ +    R+YF E  F EI++  L   +P     ++            + +  
Sbjct: 140 QKILDIRHELTKLTRKYFDELGFREIETPMLIKPTPEGARDYLVPSRVHKGSFYALPQ-- 197

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
               SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    ++++   
Sbjct: 198 ----SPQMYKQLLMVSGCDRYIQIAKCFRDEDLRADRQPEFTQIDMELSFTDADEIIAIE 253

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
              ++   +    K  +         +     +  EA  R+   D   T    +  D
Sbjct: 254 EGFLKEVFKKIKGKEIT---------TPFRRFSYDEAMERF-GSDKPDTRFGMELHD 300



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 54/155 (34%), Gaps = 10/155 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP---APESALANIYPADPRFT 259
           +  I    D    D    + +         +       +P      ++L ++        
Sbjct: 410 RNHIAKEQDLIDKDQIDLLWVTDFPMFSLEDDGHKAMHHPFTSPKLNSLEDLKDPKKLKA 469

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL-TEMP 317
             +++     E+      + D   Q+  F+        +  E       FL       +P
Sbjct: 470 DAYDIVLNGNEIGGGSIRIHDKDVQKEIFKIL-----GMDEEEIEAKFGFLLNAFSYGVP 524

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              G+A G DRL M++ GA++I +VI  P +Q+ +
Sbjct: 525 PHGGLAYGLDRLCMILAGASSIKDVIAFPKNQAAE 559


>gi|195999082|ref|XP_002109409.1| hypothetical protein TRIADDRAFT_20832 [Trichoplax adhaerens]
 gi|190587533|gb|EDV27575.1| hypothetical protein TRIADDRAFT_20832 [Trichoplax adhaerens]
          Length = 612

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 68/172 (39%), Gaps = 16/172 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPL 76
           +  L  R+ I  ++R++ ++   F E+++ +L + +P      R F       +      
Sbjct: 143 QQNLRLRSNIVMAMRKFLIDRAGFAEVETPTLFKRTPEG---AREFLVPTRQPELF---Y 196

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   + L+  G ++ F FA  +R+ +     QPEFT L+   +  +   +    
Sbjct: 197 TLVQSPQQFKQLLMVGGLDRYFQFARCYRDEDSRADRQPEFTQLDLEMSFVNQYDIQSLI 256

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            ++I     +   K+ +              ++ A+A  +Y +       D 
Sbjct: 257 EDMIHDIWPITGHKLSTP--------IPFPRMSFADAVTKYGSDKPDVRFDM 300



 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 8/95 (8%)

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           + ++L     E+      + D   Q   FEK ++     +       +  L  L    P 
Sbjct: 498 QHYDLVLNGNEVGGGSIRVHDFNLQTQIFEKILKVNASQF-------KHLLKGLKSGCPP 550

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             GIA+GFDR + ++  ++++ +VI  P S S ++
Sbjct: 551 HGGIALGFDRFMAVLCNSSSLRDVIAFPKSASGKD 585


>gi|294784989|ref|ZP_06750277.1| aspartate--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486703|gb|EFG34065.1| aspartate--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 592

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +  S+R Y  +  F+++D+  L   +P      +    T       
Sbjct: 136 RRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGARDFLVPSRTNPGTFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDIEISFVEKED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           + +  AEA  R+   D        + 
Sbjct: 250 VMNEIEGLAKYVFKNVTGEEANYT---------FQRMPYAEAMDRF-GSDKPDLRFGVEL 299

Query: 192 PD 193
            D
Sbjct: 300 KD 301



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 16/166 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN-CCTILDRYPAPESALANIYP 253
            L     +   +    D  +  +    + +  E                A +        
Sbjct: 411 ALRLKIGKDLELINKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLTGQ 470

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDF 309
            +   T  ++L     E+      + +P  Q   F++    + + K K           F
Sbjct: 471 TEDIRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFG--------FF 522

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
           L       P   G+A G DR +M++    +I +VI  P  ++N+ +
Sbjct: 523 LDAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFP--KTNKGQ 566


>gi|118586991|ref|ZP_01544423.1| aspartyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118432613|gb|EAV39347.1| aspartyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 591

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 8/195 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ I SS   +  EN F++I++  L   +P     ++            
Sbjct: 137 RRPEMQKGLILRSKIMSSSMRFMEENGFLDIETPYLAKSTPEGARDYLVPSRIYPGSFYA 196

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A  +R+ +     QPEFT L+   +  +  +
Sbjct: 197 LPQ------SPQLFKQLLMGAGFDRYFQIARCFRDEDLRGDRQPEFTQLDMETSFMNQGE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+     I        +      +     + E      ++       I+L    +   Q
Sbjct: 251 IMELVNRWITQIMSDVAKANIDSNSFPVLHWQEAMDRFGSDKPDLRFGIELHDVSEIMKQ 310

Query: 192 PDRHLLYLQAQQAGI 206
            +  +     ++ G 
Sbjct: 311 TNFTVFTGAIKKGGF 325



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 50/159 (31%), Gaps = 17/159 (10%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +       ++ I    L E  E              P  E         D
Sbjct: 412 LRKYVAKELDLINESKWDFAWIVDWPLFEYSEDFGRWIAAHHPFTMPNEEDLHYLDDGED 471

Query: 256 PR--FTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDE 307
           P     + ++L     EL +    +     Q+   +       + ++      E      
Sbjct: 472 PHLAHAQSYDLVLNGYELGSGSIRIHTMDIQKKMLKALGFTSDQAEKAFGFLLEAME--- 528

Query: 308 DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                    P   GIA+G DRL ML++G  NI EVI  P
Sbjct: 529 ------YGFPPMGGIALGLDRLAMLLSGKENIREVIAFP 561


>gi|319795424|ref|YP_004157064.1| aspartyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315597887|gb|ADU38953.1| aspartyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 602

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 6/153 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +++G+          +    + E  E     +        P            +    K 
Sbjct: 426 KKSGL-FDDRWAPLWVVDFPMFEFDEEGQRWSAVHHPFTAPKDGHEDLMDTAPEKCIAKA 484

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++    IE+      +     Q   F    +  K    +        L  L    P   
Sbjct: 485 YDMVLNGIEMGGGSVRIHREEVQSKVF----RALKISAEDAQLKFGFLLDALQYGAPPHG 540

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           GIA+G DRLVML+TGA +I +VI  P +Q  Q+
Sbjct: 541 GIAIGLDRLVMLMTGAESIRDVIAFPKTQRAQD 573



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 69/207 (33%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R  +    R++   N FI+I++  L + +P     ++            
Sbjct: 133 RRPAMQRNMMLRYKVTMETRKFLDANGFIDIETPMLGKSTPEGARDYLVPSRVHDGSFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 193 LPQ------SPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFLAEEE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +IR     A                    +T  +A  +Y   D        + 
Sbjct: 247 IREMFEGMIRNVFRNAAGIDLPV----------FPTMTYGDAMFKY-GSDKPDLRVKLEF 295

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L  + +      A       + 
Sbjct: 296 TELTELMKRVEFKVFSNAATQKDGRVV 322


>gi|257888148|ref|ZP_05667801.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257824202|gb|EEV51134.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,141,733]
          Length = 589

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              +    +  RN    ++R Y  +N F++I++  L + +P     ++            
Sbjct: 135 RRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETTFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +       +              +T  EA ARY   D   T    + 
Sbjct: 249 IQTYTEGLIAKVMKEVRGIEVT---------LPFPRMTYDEAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQAQ 202
            D      + +
Sbjct: 299 IDLSETVKEVE 309



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +      E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEYIPLLAEDPAKVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q    +     K+++  E +      L  L    P   
Sbjct: 475 YDIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQM-EEQFG---FLLTALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DR  ML+ G +NI EVI  P
Sbjct: 531 GIALGLDRFAMLLAGEDNIREVIAFP 556


>gi|146319795|ref|YP_001199507.1| aspartyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146321990|ref|YP_001201701.1| aspartyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253752776|ref|YP_003025917.1| aspartyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754601|ref|YP_003027742.1| aspartyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|166225435|sp|A4W4L2|SYD_STRS2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225436|sp|A4VYB8|SYD_STRSY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145690601|gb|ABP91107.1| Aspartyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692796|gb|ABP93301.1| Aspartyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251817065|emb|CAZ52717.1| aspartyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251820847|emb|CAR47613.1| aspartyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319759194|gb|ADV71136.1| aspartyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 583

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  I    + E  E              P  E+A       
Sbjct: 402 ALRNRLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +   + +      L  
Sbjct: 462 AQVRAVAYDIVLNGYELGGGSLRINQKDMQEQMF------KALGFSAEDAHEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFP 550



 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 70/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  +  ++      +I    +       +             +    +   R+  +
Sbjct: 236 DLETSFLNEVEIQDIVEGLIAKVLKDTKGIDVTLPFPRMAYDHAMNFYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYL-QAQQAGIRVAHDDTWSDIFSRILIE 224
               T    +   +        +   ++ A D        ++   
Sbjct: 296 LQDLTELVKEVDFKVFSEAPVVKAIVVKGAADSYSRKDIDKLTDY 340


>gi|94995326|ref|YP_603424.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94548834|gb|ABF38880.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 599

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 139 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 198

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 199 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 252

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +   +   +      +           +   R+  +
Sbjct: 253 DLETSFLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDIAMNSYGSDKPDTRFEML 312

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T+       +      A +   ++   D        ++   
Sbjct: 313 LQDLTVTVKGIDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEF 357



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 419 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 478

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 479 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANDQFGFLLEA 532

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 533 MDYGFPPHGGLAIGLDRFVMLLAGKGNIREVIAFP 567


>gi|257871025|ref|ZP_05650678.1| aspartyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805189|gb|EEV34011.1| aspartyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 590

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     ++ G+       +  +      E                 P  +         
Sbjct: 408 AIRSKLGKELGLIDESKFNFLWVTDWPQFEYDAEAGRYVSAHHPFTMPKEKDVPLLATDP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
              + + +++     EL      +     Q   FE     ++++  E +      L  L 
Sbjct: 468 AKVYAEAYDIVLNGYELGGGSLRIHQRDVQEQMFETLGFSRREM-EEQFG---FLLTALD 523

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+ G  NI EVI  P
Sbjct: 524 YGFPPHGGIALGLDRLVMLLAGEENIREVIAFP 556



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 63/182 (34%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    ++ R      +R +   N F++I++  L   +P     ++            
Sbjct: 135 RRPKMTKNIMMRAKTTQVIRHFLDTNDFLDIETPYLAKSTPEGARDYLVPSRVYPGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETTFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++            +         +    +T  +A ARY   D   T  + + 
Sbjct: 249 IQAYTEELLVNVMREVKGLEVT---------TPFPRMTYDDAMARY-GSDKPDTRFDMEL 298

Query: 192 PD 193
            D
Sbjct: 299 ID 300


>gi|227552624|ref|ZP_03982673.1| aspartate--tRNA ligase [Enterococcus faecium TX1330]
 gi|257896961|ref|ZP_05676614.1| aspartyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378683|ref|ZP_06624842.1| aspartate--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227178250|gb|EEI59222.1| aspartate--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833526|gb|EEV59947.1| aspartyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292642723|gb|EFF60874.1| aspartate--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 589

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              +    +  RN    ++R Y  +N F++I++  L + +P     ++            
Sbjct: 135 RRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETTFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +       +              +T  EA ARY   D   T    + 
Sbjct: 249 IQTYTEGLIAKVMKEVRGIEVT---------LPFPRMTYDEAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQAQ 202
            D      + +
Sbjct: 299 IDLSETVKEVE 309



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +      E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEDIPLLAEDPAKVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q    +     K+++  E +      L  L    P   
Sbjct: 475 YDIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQM-EEQFG---FLLTALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DR  ML+ G +NI EVI  P
Sbjct: 531 GIALGLDRFAMLLAGEDNIREVIAFP 556


>gi|296394114|ref|YP_003658998.1| aspartyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181261|gb|ADG98167.1| aspartyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 601

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 75/204 (36%), Gaps = 29/204 (14%)

Query: 3   QIP---SQPWWNRDF-HYR----RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P    +P       HYR    RRP     L  R+ + ++ R   ++  F E+++ +L 
Sbjct: 105 PLPFPLDEPPGEETRFHYRYLDLRRPEAAQMLRLRSTLNAAARRVLLDRDFTEVETPTLT 164

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             +P      R F     +         L  SP+   + L+ AG E+ F  A  +R+ + 
Sbjct: 165 RSTPEG---ARDFIVPARL--KPGSWYALPQSPQLFKQLLMVAGLERYFQLARCYRDEDF 219

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
               QPEFT L+   +  + + ++     ++     V  +           P      I+
Sbjct: 220 RADRQPEFTQLDLEMSFVTQDDVIALAEEVVAAVWGVLGE----------APELPLPRIS 269

Query: 170 VAEAFARYANIDLGTTLDNPDQPD 193
            AEA  RY   D        +  D
Sbjct: 270 YAEAMRRY-GSDKPDLRFGVELVD 292



 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 13/110 (11%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKK 297
           P+ ES            ++ ++L     E+      +     Q    +     + + +  
Sbjct: 454 PSEESLATLEQDPGSALSQAYDLVCNGHEIGGGSIRIHRREVQERVLKLMGFDQERAQAA 513

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                       L       P   G+A G+DR+  L+ G ++I EVI  P
Sbjct: 514 FG--------FLLDAFSYGPPPHGGMAFGWDRITALLAGVDSIREVIAFP 555


>gi|199599330|ref|ZP_03212728.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|258508556|ref|YP_003171307.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|199589769|gb|EDY97877.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|257148483|emb|CAR87456.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649863|dbj|BAI42025.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 601

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 66/188 (35%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +  R  I  S+  Y  +N FI++++ +L   +P     ++            
Sbjct: 135 RRPEMQKNIFTRAHIMRSVHHYLDDNGFIDVETPTLTASTPEGARDYLVPSRVYPGSFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQPEFTQIDLETSFLSAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I                   +     + IT  EA  +Y +       D   Q
Sbjct: 249 IQDITEGLIAQVMHDVKG---------IDVDLPFQRITWQEAMDKYGSDKPDLRFDMQIQ 299

Query: 192 PDRHLLYL 199
               L+  
Sbjct: 300 DVSDLVKD 307



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 45/151 (29%), Gaps = 15/151 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
              G+    +  +  +    L E  E              P  E              + 
Sbjct: 414 HDLGLIDEKEFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQS 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEK-----EMQEKKKIYNETYPIDEDFLACL-TE 315
           +++     EL      + +   Q    +      E  +K              L  L   
Sbjct: 474 YDIVLNGYELGGGSIRIHNRDIQEKMLKALGFTPERAQKSFG---------FLLNALDYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   G+A+G DR  ML+TG +NI +VI  P
Sbjct: 525 FPPHGGLAIGLDRFTMLLTGRDNIRDVIAFP 555


>gi|257084828|ref|ZP_05579189.1| aspartyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257090252|ref|ZP_05584613.1| aspartyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|312902749|ref|ZP_07761953.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|256992858|gb|EEU80160.1| aspartyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256999064|gb|EEU85584.1| aspartyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|310633803|gb|EFQ17086.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315174311|gb|EFU18328.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX1346]
 gi|315576680|gb|EFU88871.1| aspartyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 589

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 21/178 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
           RRP     +  R+ +  ++R Y   + F++I++  L + +P     ++            
Sbjct: 135 RRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQIDIETTFLTPEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           +     N++    +       S              ++  EA ARY +    T     
Sbjct: 249 IQTYTENMLAEVMKETKGIEIS---------VPFPRMSYDEAMARYGSDKPDTRFAME 297



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 46/146 (31%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    L E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   FE     K+    E        L  L    P   
Sbjct: 475 YDVVLNGYELGGGSLRIHTRELQEKMFETLGFTKE----EAQDQFGFLLDALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DRL ML+ G  NI EVI  P
Sbjct: 531 GIALGLDRLAMLLAGEENIREVIAFP 556


>gi|253756534|ref|YP_003029674.1| aspartyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251818998|emb|CAZ56845.1| aspartyl-tRNA synthetase [Streptococcus suis BM407]
          Length = 583

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  I    + E  E              P  E+A       
Sbjct: 402 ALRNRLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +   + +      L  
Sbjct: 462 AQVRAVAYDIVLNGYELGGGSLRINQKDMQEQMF------KALGFSAEDAHEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFP 550



 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 70/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  +  ++      +I    +       +             +    +   R+  +
Sbjct: 236 DLETSFLNEVEIQDIVEGLIAKVLKDTKGIDVTLPFPRMAYDHAMNFYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYL-QAQQAGIRVAHDDTWSDIFSRILIE 224
               T    +   +        +   ++ A D        ++   
Sbjct: 296 LQDLTELVKEVDFKVFSEAPVVKAIVVKGAADSYSRKDIDKLTDY 340


>gi|242007519|ref|XP_002424587.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212508030|gb|EEB11849.1| aspartyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 582

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 24/201 (11%)

Query: 5   PSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNET 57
           P++    +  +   R       L  R+ I  ++R+Y +E+  F+E+++ +L + +PG   
Sbjct: 115 PNESIRMKYRYLDLRYPNMQHNLRLRSKIIYNMRKYLIEHLDFVEVETPTLFKRTPGGAQ 174

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
               F      +        L  SP+   + L+    ++ F  A  +R+       QPEF
Sbjct: 175 E---FIVPTEKKGKF---YSLVQSPQQFKQLLMIGSIDRYFQIARCYRDEPMRNDRQPEF 228

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T L+   +    E +      +++     +  K+ +              ++  EA   Y
Sbjct: 229 TQLDIEMSFCDREDIFNLIEELLKNCWPESLGKLKT----------PFPRLSYEEAMNSY 278

Query: 178 ANIDLGTTLDNPDQPDRHLLY 198
              D      +    D   L+
Sbjct: 279 -GTDKPDLRFDWKLKDLTSLF 298



 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 59/165 (35%), Gaps = 12/165 (7%)

Query: 192 PDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
             R       ++ GI V       +S I    L E ++    I         P  +    
Sbjct: 404 KTRVNFADYLEENGISVFDKNSYCFSWIVDFPLFEIVDDK--IQSAHHPFTQPHSKDFDL 461

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                    +  F+L     E+      + D   Q+   EK +     +  E+       
Sbjct: 462 LEKNPLKVKSLHFDLVLNGNEIGGGSIRITDGNLQKIILEKIL----NMNAESV---SHL 514

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           +  L +  P   GIA+G DRL+ ++  AN+I EVI  P ++  Q+
Sbjct: 515 IEGLNSGAPPHGGIALGLDRLMTIICKANSIREVIAFPKNRLGQD 559


>gi|253582252|ref|ZP_04859475.1| aspartate-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251835791|gb|EES64329.1| aspartate-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 595

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 8/218 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    L  R+ +  ++R +  +  F++ID+  L   +P      R F     I    
Sbjct: 135 RRSRMLHNLKMRHKMIMAIRNFMDKEGFLDIDTPLLTKSTPEG---ARDFLVPCRIS--- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G E+ F  A  +R+ +     Q EF  L+   +  + + 
Sbjct: 189 PGDFYALPQSPQLFKQLLMIGGVERYFQLAKCFRDEDLRADRQFEFVQLDIEMSFVTMDD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    + +        +  ++                 +   R+       T    + 
Sbjct: 249 VMRTIEGLAKNVFTAITGEEVNYTFQKMPYAEAMSRFGSDKPDIRFGVELKDLTEIVRNS 308

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +      A    ++       ++ FSR +I + E +
Sbjct: 309 GFKAFQETVANGGIVKAVVAPQGAEKFSRKIIGEYEEH 346



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 42/139 (30%), Gaps = 15/139 (10%)

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD-----PRFTKR-----FELYACN 268
                  +             RY A      +I   D        T+      +++    
Sbjct: 425 DEFKFLWVVDFPMFQYDEEEQRYKAEHHPFTSIKDEDLNAFLDGQTENIRTNTYDMVLNG 484

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFD 327
            E+      + +P  Q   F++          E       FL       P   G+A G D
Sbjct: 485 FEIGGGSIRIFNPEIQAKVFDRLGLT----PEEAKTKFGFFLDAFKYGAPPHGGLAFGLD 540

Query: 328 RLVMLVTGANNINEVIWTP 346
           R +M++   N+I +VI  P
Sbjct: 541 RWLMVMLKENSIRDVIPFP 559


>gi|94991414|ref|YP_599514.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94544922|gb|ABF34970.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 599

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 139 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 198

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 199 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 252

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +   +   +      +           +   R+  +
Sbjct: 253 DLETSFLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEML 312

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T+       +      A +   ++   D        ++   
Sbjct: 313 LQDLTVTVKGIDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEF 357



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 419 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 478

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 479 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANAQFGFLLEA 532

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 533 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 567


>gi|325929372|ref|ZP_08190502.1| aspartyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325540284|gb|EGD11896.1| aspartyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 588

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 78/229 (34%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 110 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +           V+ +  ++   +
Sbjct: 224 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMIRAIFKEV---------VDVDLAAQFPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  R+   D        +  D   L   +Q      A DD    +
Sbjct: 275 TWAEAMRRF-GSDKPDLRIALELVDVAELVKASQFPVFTAAADDADGRV 322



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    VA       +    + E  E              PA +        A 
Sbjct: 408 ALRLKAGKDFNLVADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANAR 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 468 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 524 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 555


>gi|325474142|gb|EGC77330.1| aspartyl-tRNA synthetase [Treponema denticola F0402]
          Length = 590

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     +  G+    +  +  I    L E  E     +    +   P  +         
Sbjct: 412 AVRSKLGKDLGLLNPAEFKFVWIVDFPLFEWNEEENKWDPAHHMFSAPQEKYIATMEENP 471

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +P     ++L     E+ +    + +P  Q+  F      E E ++K     E +     
Sbjct: 472 EPVKGDLYDLVLNGYEVASGSIRIHNPELQKRIFKIVGFDESEAEKKFGFLTEAFK---- 527

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   GIA G DR+VM++ G  +I EVI  P
Sbjct: 528 -----YGAPPHGGIAPGLDRIVMIMAGETSIKEVIAFP 560



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 77/210 (36%), Gaps = 28/210 (13%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMS-LQY 51
           QI  +   N D   + R            ++ R+    ++RE+     F+EI++ + ++ 
Sbjct: 116 QIDEKTNANEDLRLKYRYLDLRSKAMQDHIMLRSKFTFAVREFLTSKDFLEIETPTFIKS 175

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G +K F  A  +R+ +  
Sbjct: 176 TPEGARDYLVPSRLYPGKFYALPQ------SPQIYKQILMVSGFDKYFQIARCYRDEDAR 229

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  S E ++     +++ A           +++N +     E I+ 
Sbjct: 230 GDRQPEFTQIDLEMSFASREDVLSLTEGMMQYAF---------KKSINVDLPKTFERISY 280

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            EA   Y   D           D   +   
Sbjct: 281 DEAIDVY-GTDKPDLRFEMKMQDAAFMAEI 309


>gi|78222569|ref|YP_384316.1| aspartyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|97196683|sp|Q39VY3|SYD_GEOMG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78193824|gb|ABB31591.1| aspartyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 594

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 47/144 (32%), Gaps = 5/144 (3%)

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G+   +   +  I    L+E  E              P  E              K ++
Sbjct: 423 LGLADKNTFRFVWITDFPLLEWDEDEKRWAAVHHPFTAPMDEDLEKVESDPGSCRAKAYD 482

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           L     E+      +     Q   F           +ET       L  L    P   GI
Sbjct: 483 LVLNGNEIGGGSIRIHQQHVQSLMF----SMLGLSDDETRAKFGFLLDALECGTPPHGGI 538

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DRL+ML+TG+++I +VI  P
Sbjct: 539 AFGMDRLIMLLTGSDSIRDVIAFP 562



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 77/200 (38%), Gaps = 25/200 (12%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP L    + R+M+    R+Y  EN F+EI++  L   +P      R F     I    
Sbjct: 141 RRPVLQQNLILRSMVAQITRQYLSENGFLEIETPFLTKSTPEG---ARDFLVPSRIN--- 194

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 195 QGNFYALPQSPQIFKQILMISGFDRYFQIVRCFRDEDLRADRQPEFTQIDCEMSFIDRED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I     VA                    +T AEA  R+  +D        + 
Sbjct: 255 IISVMEGLIAKIFTVAKGVDVP---------LPMPRMTYAEAIRRF-GVDNPDVRFGLEL 304

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    + AG +V  D
Sbjct: 305 VE---LTDIVKGAGFKVFAD 321


>gi|21232460|ref|NP_638377.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767456|ref|YP_242218.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|24212399|sp|Q8P6E0|SYD_XANCP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|81306564|sp|Q4UXM5|SYD_XANC8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21114243|gb|AAM42301.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66572788|gb|AAY48198.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 588

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 77/229 (33%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   D   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 110 PLPFHAHENPGEDTRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +           V+    ++   +
Sbjct: 224 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMIRAIFKEV---------VDVELAAQFPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D        +  D   L   ++      A +D    +
Sbjct: 275 TWAEAMRRY-GSDKPDLRIALELVDVAELVKTSEFPVFAAAANDADGRV 322



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    VA       +    + E  E              PA +        A 
Sbjct: 408 ALRLKAGKDFGLVAAGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANAR 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 468 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 524 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 555


>gi|254302704|ref|ZP_04970062.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322896|gb|EDK88146.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 592

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +  S+R Y     F+++D+  L   +P      +    T       
Sbjct: 136 RRNKMLNNLKMRHKMIMSIRNYMDNAGFLDVDTPVLTKSTPEGARDFLVPSRTNPGTFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDIEMSFVEKED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           + +  AEA  R+   D        + 
Sbjct: 250 VMNEIEGLAKYVFKNVTGEEANYT---------FQRMPYAEAMDRF-GSDKPDLRFGVEL 299

Query: 192 PD 193
            D
Sbjct: 300 KD 301



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 15/154 (9%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           I          +   +     E               A +         +   T  ++L 
Sbjct: 423 INKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTEDIRTNTYDLV 482

Query: 266 ACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
               E+      + +P  Q   F++    + + K K           FL       P   
Sbjct: 483 LNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFG--------FFLDAFKYGAPPHG 534

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
           G+A G DR +M++    +I +VI  P  ++N+ +
Sbjct: 535 GLAFGIDRWLMVMLKEESIRDVIPFP--KTNKGQ 566


>gi|116333383|ref|YP_794910.1| aspartyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116098730|gb|ABJ63879.1| aspartyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 600

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 68/188 (36%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +  RN I  S+  YF  N FI+I++ +L   +P     ++            
Sbjct: 138 RRPEMQRAIRLRNRIIQSVHSYFDNNGFIDIETPNLTKSTPEGARDYLVPSRIYPGHFYA 197

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +  + E+
Sbjct: 198 LPQ------SPQLFKQLLMGSGFDRYYQIARCFRDEDLRGDRQPEFTQIDLETSFLTAEE 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I                +N +     + +   ++ ARY   D        + 
Sbjct: 252 IQDLTEGLIA---------KVMKDTLNVDVKLPFQRMDWDDSMARY-GTDQPDVRFGMEL 301

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 302 KDLSEMMA 309



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 13/157 (8%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +   +   +  I +  L +                 PA   A       D
Sbjct: 414 LRVAIAKEQDMIDENKWAFLWIVNWPLFDYDVDLERWVPAHHPFTMPAEGDAHYLNDGED 473

Query: 256 PR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY---NETYPIDEDFL 310
           P   + + +++    +EL      +          E +M+  K +              L
Sbjct: 474 PHKAYAQSYDIILNGLELGGGSIRIHTR-------ELQMKMLKALGFTPERAESQFGFLL 526

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   G+A+G DR   L+   +NI +VI  P
Sbjct: 527 KALDYGFPPHGGLAIGLDRFARLLAKRDNIRDVIAFP 563


>gi|88606895|ref|YP_504813.1| aspartyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|123722838|sp|Q2GLD8|SYD_ANAPZ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|88597958|gb|ABD43428.1| aspartyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 598

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 70/208 (33%), Gaps = 28/208 (13%)

Query: 5   PSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSP 53
           P+      D   + R            +L R+ + S +R+      FIE+ +  L   SP
Sbjct: 117 PTSTNHPEDLRLKYRFLDLRCDKVKSNMLLRSAVISEMRKAMESRGFIEVQTPILTASSP 176

Query: 54  GNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
                ++            + +      +P+   + L+A+G +K F  A  +R+ +    
Sbjct: 177 EGARDYLVPSRVHAGKFYALPQ------APQIFKQLLMASGFDKYFQIAPCFRDEDARAD 230

Query: 113 HQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
             P EF  L+   +  +           +    E   + IF+    N +       IT  
Sbjct: 231 RSPGEFYQLDVEMSFVT--------QEDVFSVMEPVLRDIFTKFAGNRSVSPTFPRITYK 282

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +A  RY   D     +     D   ++L
Sbjct: 283 DAMLRY-GTDKPDLRNPIIIADVSEVFL 309



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL---ACLT- 314
             ++++    IE+ +              F            E   +D +F         
Sbjct: 474 AYQYDIVCNGIEISSGAIRNHKLDILYKAFSM-----VGYSPEA--VDAEFGALTRAFRF 526

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            +P   GIA G DR+VML+    NI E+I+ P +Q  ++
Sbjct: 527 GVPPHGGIAPGVDRIVMLLADVPNIREIIYFPLTQMGED 565


>gi|139474587|ref|YP_001129303.1| aspartyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|166225434|sp|A2RGY0|SYD_STRPG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|134272834|emb|CAM31112.1| aspartyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 582

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +   +   +      +           +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T+       +      A +   ++   D        ++   
Sbjct: 296 LQDLTVTVKGIDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEF 340



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 402 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 462 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+   +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAEKDNIREVIAFP 550


>gi|116490654|ref|YP_810198.1| aspartyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290890068|ref|ZP_06553151.1| hypothetical protein AWRIB429_0541 [Oenococcus oeni AWRIB429]
 gi|116091379|gb|ABJ56533.1| aspartyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290480259|gb|EFD88900.1| hypothetical protein AWRIB429_0541 [Oenococcus oeni AWRIB429]
          Length = 591

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 8/195 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ I SS   +  EN F++I++  L   +P     ++            
Sbjct: 137 RRPEMQKGLILRSKIMSSSMRFMEENGFLDIETPYLAKSTPEGARDYLVPSRIYPGSFYA 196

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A  +R+ +     QPEFT L+   +  +  +
Sbjct: 197 LPQ------SPQLFKQLLMGAGFDRYFQIARCFRDEDLRGDRQPEFTQLDMETSFMNQGE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+     I        +      +     + E      ++       I+L    +   Q
Sbjct: 251 IMELVNRWITQIMSDVVKANIDSNSFPVLHWQEAMDRFGSDKPDLRFGIELHDVSEIMKQ 310

Query: 192 PDRHLLYLQAQQAGI 206
            +  +     ++ G 
Sbjct: 311 TNFTVFTGAIKKGGF 325



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 50/159 (31%), Gaps = 17/159 (10%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +       ++ I    L E  E              P  E         D
Sbjct: 412 LRKYVAKELDLIDESKWDFAWIVDWPLFEYSEDFGRWIAAHHPFTMPNEEDLHYLDDGED 471

Query: 256 PR--FTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDE 307
           P     + ++L     EL +    +     Q+   +       + ++      E      
Sbjct: 472 PHLAHAQSYDLVLNGYELGSGSIRIHTMDIQKKMLKALGFTSDQAEKAFGFLLEAME--- 528

Query: 308 DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                    P   GIA+G DRL ML++G  NI EVI  P
Sbjct: 529 ------YGFPPMGGIALGLDRLAMLLSGKENIREVIAFP 561


>gi|257095694|ref|YP_003169335.1| aspartyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048218|gb|ACV37406.1| aspartyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 600

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  +  R     + R +  +  FI+I++  L   +P     ++            
Sbjct: 131 RRPQMQQNMQLRYKTARAFRRFLDDAGFIDIETPMLTKSTPEGARDYLVPSRVHP----- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 186 -GQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQVDIETSFMGEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +++    +IR     A                    +   EA  RY +   DL  TL+  
Sbjct: 245 IIELMEELIRVVFREAIGSTLP---------KPFPRLPYGEAMDRYGSDKPDLRVTLELV 295

Query: 190 DQPD 193
           D  D
Sbjct: 296 DVTD 299



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 43/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G    H      +    + +  E       C      P  E         
Sbjct: 411 ALRVKIGHEKGFLNGHAWEPVWVVDFPMFDYDEEARRWTACHHPFTSPKDEHLPRLETDP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K ++L     EL      +     Q   F+           E        L  L 
Sbjct: 471 GSCLAKAYDLALNGSELGGGSVRIHQAAVQEKVFKALGI----GEEEAQQKFGFLLDALK 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DR+V ++ GA +I +VI  P
Sbjct: 527 YGAPPHGGLAFGLDRIVTMLAGAESIRDVIAFP 559


>gi|118594331|ref|ZP_01551678.1| aspartyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440109|gb|EAV46736.1| aspartyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 597

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  +  R  I  ++R+Y     FIEI++  L   +P     ++            
Sbjct: 131 RRDQMQKNMKLRYDISKNIRQYLDHESFIEIETPILTRSTPEGARDYLVPSRVHHGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 191 LPQ------SPQLFKQILMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDIEASFVDEED 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    N+ R   +    +                 +T  EA  R+ +      +     
Sbjct: 245 IMSIAENMTREMFKKVMDQSLPQS---------FPRMTYQEAMHRFGSDKPDLRVTLELI 295

Query: 192 PDRHLLYL 199
                +  
Sbjct: 296 ELTEEMKD 303



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 43/159 (27%), Gaps = 5/159 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L                    I    + +  E     N        P            
Sbjct: 411 ALREKIGHDKKHLTNEPWAPVWIVDFPMFDFDEEGNRWNALHHPFTSPKDGHEGLLETDP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               +K +++     E+      +     Q   F+           E        L  L 
Sbjct: 471 GNCLSKAYDMVINGWEVGGGSIRIHQQTVQSKVFKALNIS----DEEAREKFGFLLDALQ 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              P   G+A G DRL  L+ GA++I +VI  P +Q  Q
Sbjct: 527 YGAPPHGGLAFGLDRLATLLAGADSIRDVIAFPKTQKAQ 565


>gi|188990562|ref|YP_001902572.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|229559950|sp|B0RPX9|SYD_XANCB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167732322|emb|CAP50514.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 588

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 77/229 (33%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   D   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 110 PLPFHAHENPGEDTRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +           V+    ++   +
Sbjct: 224 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMIRAIFKEV---------VDVELAAQFPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D        +  D   L   ++      A +D    +
Sbjct: 275 TWAEAMRRY-GSDKPDLRIALELVDVAELVKTSEFPVFAAAANDADGRV 322



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    VA       +    + E  E              PA +        A 
Sbjct: 408 ALRLKAGKDFGLVAAGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANAR 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 468 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 524 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 555


>gi|307565634|ref|ZP_07628112.1| aspartate--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307345666|gb|EFN91025.1| aspartate--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 585

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 73/223 (32%), Gaps = 10/223 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  +  R+ +   +R +     FIE+++  L   +P      R F     +    
Sbjct: 132 RRAAVRKNIELRHKMTIMIRNFLDSQDFIEVETPILIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +      +
Sbjct: 187 GQFYALPQSPQTLKQLLMIAGFDRYFQIAKCFRDEDLRADRQPEFTQVDCEMSFVDQNDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + R               +   P++E      ++       ++    +++    
Sbjct: 247 INMFEEMCRVLFREIRG--VELPKLEQMPWAEAMKCFGSDKPDLRFGMEFVELINDLKGT 304

Query: 193 DRHLLYLQAQQAGIRVAHDD--TWSDIFSRILIEKIEPNLGIN 233
               ++ +A   G  V            + +      P +G  
Sbjct: 305 GEFSVFNEANYIGGIVVPGCASYSRKQLNELTDFVKRPQIGAQ 347



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 43/136 (31%), Gaps = 6/136 (4%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
                I   +     E    +            +  L   +P   R    ++     IE+
Sbjct: 423 KCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPEDLPLLEEHPEQVR-ALAYDFVCNGIEV 481

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLV 330
                 + D   Q   F+     K++   E +      +       P  +G+A G DR V
Sbjct: 482 GGGSIRIHDTQLQERMFKHLGFTKERA-EEQFG---FLMNAFKYGAPPHAGLAFGLDRFV 537

Query: 331 MLVTGANNINEVIWTP 346
            ++ G ++I + I  P
Sbjct: 538 SIMAGLDSIRDCIAFP 553


>gi|282880058|ref|ZP_06288779.1| aspartate--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281306072|gb|EFA98111.1| aspartate--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 586

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 6/197 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +    QFIE+++  L   +P      R F     +    
Sbjct: 132 RRPTVRKNLELRHRMTILIRNFLDNEQFIEVETPVLIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQEDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    N+ R   +         +          +     +   R+    +        + 
Sbjct: 247 IGLFENLCRHLFKEIRGVELPAKLQQMTWAEAMKRFGSDKPDLRFGMEFVELMDTLKGKA 306

Query: 193 DRHLLYLQAQQAGIRVA 209
           D  +    A   GI V 
Sbjct: 307 DFSVFNEAAYIGGICVP 323



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
            L     ++ G+R  +      I    +     E    +            +  L + +P
Sbjct: 406 ALRLEMGERLGLRDKNKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHP 465

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLAC 312
              R  K ++     IE+      + D   Q   FE           E         +  
Sbjct: 466 EKVR-AKAYDFVCNGIEVGGGSLRIHDGQLQAKMFEIL-----GFTPEKAMAQFGFLINA 519

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P  +G+A G DR V ++ G ++I + I  P
Sbjct: 520 FKYGAPPHAGLAFGLDRFVSIMAGLDSIRDCIAFP 554


>gi|71904484|ref|YP_281287.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|71803579|gb|AAX72932.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 599

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 139 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 198

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 199 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 252

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +   +   +      +           +   R+  +
Sbjct: 253 DLETSFLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEML 312

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T+       +      A +   ++   D        ++   
Sbjct: 313 LQDLTVTVNGIDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEF 357



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 419 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 478

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 479 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANDQFGFLLEA 532

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 533 MDYGFPPHGGLAIGLDRFVMLLAGKGNIREVIAFP 567


>gi|305665586|ref|YP_003861873.1| aspartyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88710342|gb|EAR02574.1| aspartyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 582

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 80/234 (34%), Gaps = 28/234 (11%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R Y  +  FIE+++  L   +P      R F     + +  
Sbjct: 133 RRNPVKENLIFRSQVTMEVRNYLSKEGFIEVETPYLIKSTPEG---ARDFVVPSRMNE-- 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDI 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGT 184
           +K    + R   +       +          E   +T  EA A+Y          ++ G 
Sbjct: 248 LKAFEGLTRHLLKEIKGVETT----------EFPRMTYDEAMAKYGNDKPDIRFGMEFGE 297

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTI 237
                   D ++        GI V            +++     P +G      
Sbjct: 298 LNSVAQHKDFNVFNSAELVVGIAVPGGASYTRKEIDKLVDWVRRPQVGAKGMVY 351



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 46/157 (29%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R   +     +    L+E  E     +        P P          
Sbjct: 404 ALRMELAERLGLRNNAEFAPLWVIDFPLLELDEETGRYHAMHHPFTSPKPGQLELLDSEP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q   F+       + K +            +
Sbjct: 464 SNVKANAYDLVLNGNEIGGGSIRIHDKDIQSTMFKHLGFTPEEAKAQFG--------FLM 515

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   GIA G DRLV ++ G   I + I  P
Sbjct: 516 DAFQYGAPPHGGIAFGLDRLVSILGGQETIRDFIAFP 552


>gi|300775946|ref|ZP_07085806.1| aspartate--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300505496|gb|EFK36634.1| aspartate--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 584

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 78/234 (33%), Gaps = 28/234 (11%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R Y  +  FIE+++  L   +P      R F     +    
Sbjct: 133 RRNPVKDKLIFRHKMAQKVRNYLSDEGFIEVETPVLIKSTPEG---ARDFVVPSRMN--P 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDV 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGT 184
           M     + +   +                F +   +T A+A  +Y          ++   
Sbjct: 248 MNVFEGMTKTLLKDITG----------QEFGDFPRMTFADAMRKYGNDKPDIRFGMEFVE 297

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEKIEPNLGINCCTI 237
             +     D  +        GI V    +        ++     P +G +    
Sbjct: 298 LNELVKGKDFKIFDDAELVVGINVEGCAEYTRKQIDELVDWVKRPQIGASGMVW 351



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R  ++     +    L+E  E     +        P PE         
Sbjct: 404 ALRMELGNRLGLRKGNEFAPLWVVDFPLLEWDEETERYHAMHHPFTSPKPEDIHLLETDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++     E+      + D   Q   F+     ++    E        +    
Sbjct: 464 GKARANAYDMVLNGNEIGGGSIRIFDKDLQSKMFDLLGFTRE----EAEAQFGFLMNAFK 519

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A GFDRLV ++ G   I + I  P
Sbjct: 520 YGAPPHGGLAFGFDRLVAILDGNEVIRDYIAFP 552


>gi|239817091|ref|YP_002946001.1| aspartyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511873|sp|C5CWX8|SYD_VARPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|239803668|gb|ACS20735.1| aspartyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 601

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 6/153 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +++G+          +    + E  E     +        P            +    K 
Sbjct: 426 KKSGL-FDDRWAPLWVVDFPMFEFDEEGQRWSAVHHPFTAPKDGHEDLMDTAPEKCIAKA 484

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++    IE+      +     Q   F    +  K    +        L  L    P   
Sbjct: 485 YDMVLNGIEMGGGSVRIHREEVQSKVF----RALKISAEDAQLKFGFLLDALQYGAPPHG 540

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           GIA+G DRLVML+TGA +I +VI  P +Q  Q+
Sbjct: 541 GIAIGLDRLVMLMTGAESIRDVIAFPKTQRAQD 573



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 69/207 (33%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R  +    R++   N FI+I++  L + +P     ++            
Sbjct: 133 RRPAMQRNMMLRYKVTMETRKFLDANGFIDIETPMLGKSTPEGARDYLVPSRVHDGSFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 193 LPQ------SPQLFKQLLMVAGYDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFLAEEE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +IR     A                    +T  +A  +Y   D        + 
Sbjct: 247 IREMFEGMIRNVFRNAAGIDLPV----------FPTMTYGDAMFKY-GSDKPDLRVKLEF 295

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L  + +      A       + 
Sbjct: 296 TELTELMKRVEFKVFSNAATMQGGRVV 322


>gi|210616235|ref|ZP_03291015.1| hypothetical protein CLONEX_03236 [Clostridium nexile DSM 1787]
 gi|210149901|gb|EEA80910.1| hypothetical protein CLONEX_03236 [Clostridium nexile DSM 1787]
          Length = 602

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 64/191 (33%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+   +  R++  E  F+EI++  L   +P     ++            
Sbjct: 141 RRPDLQRNLMMRSKAATLTRQFLAEEGFLEIETPMLIKSTPEGARDYLVPSRVHPGNFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIFKQLLMCAGYDRYFQIVKCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                    + +T  EA  R+   D        + 
Sbjct: 255 VIDVNERLLAKMFKEILG---------IEVSLPIQRMTWQEAMDRF-GSDKPDIRFGMEL 304

Query: 192 PDRHLLYLQAQ 202
            D   +    +
Sbjct: 305 TDVSEVVKDCE 315



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 53/156 (33%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  +   ++  +  I    L+E  E              P  E         
Sbjct: 415 NLRLEIARQLELLDKNEYKFLWITEFPLLEWNEEAGRYTAMHHPFTMPMEEDLHLIDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      + +   Q   FE     K++            L    
Sbjct: 475 GKVRAKAYDIVLNGTEIGGGSVRIFNQEIQSKMFEVLGFTKEQ----AQEQFGFLLNAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLVMLMAKEDSIRDVIAFPKVK 566


>gi|313902374|ref|ZP_07835777.1| aspartyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467305|gb|EFR62816.1| aspartyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 615

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 16  YRRRPFLL---KRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR         R+     +R YF  N F+E+++  L   +P     ++           
Sbjct: 159 LRRPAMFRNLWLRHRAYQVVRRYFDRNGFLEVETPMLTRSTPEGARDYLVPSRLHPGRFY 218

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+  G E+ F     +R+ +     QPEFT ++   +    +
Sbjct: 219 ALPQ------SPQLFKQLLMVGGIERYFQIVRCFRDEDLRADRQPEFTQIDVEMSFVDVD 272

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            ++     ++    +                      +T AEA ARY +    
Sbjct: 273 DVLAMAEGMMAELWQELLGVEVP---------LPLPRLTYAEAMARYGSDKPD 316



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 49/156 (31%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++       +  ++ +    L+E  E              P  E         
Sbjct: 436 KLRLQLAERLAWPRVKEWAFTWVVDFPLLEWDEEEQRYVARHHPFTSPRDEDLDRLESDP 495

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                + ++L     E+      +     Q   F       + I        E F   L 
Sbjct: 496 AGVRARAYDLVLNGYEIGGGSIRIHRRDVQERVF-------RAIGLPPEKARERFGFLLE 548

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 P   GIA GFDR+VML  GA++I +VI  P
Sbjct: 549 AFDYGPPPHGGIAFGFDRIVMLAAGASSIRDVIAFP 584


>gi|307710971|ref|ZP_07647394.1| aspartyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617211|gb|EFN96388.1| aspartyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 587

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 46/148 (31%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDGDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     EL      +     Q   F+      +    E        L  +    P 
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFLAE----EANDQFGFLLEAMDYGFPP 522

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A+G DR VML+ G  NI EVI  P
Sbjct: 523 HGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|326435143|gb|EGD80713.1| hypothetical protein PTSG_01303 [Salpingoeca sp. ATCC 50818]
          Length = 695

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 76/206 (36%), Gaps = 21/206 (10%)

Query: 2   HQIPSQPWWNRDFHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGN 55
           H++P +           RRP L    + R  + S+ R +   + F++I++ +L + +PG 
Sbjct: 210 HKLPKEDVRLTHRPLDLRRPALHNAIVTRARVASATRRFLEHHGFLDIETPTLFKRTPGG 269

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
                 F      +        L  SP+   + L+  G ++ + FA  +R+       QP
Sbjct: 270 AAE---FLVPTQKKGLF---YALVQSPQQYKQMLMVGGFDRYYQFARCYRDEGGRLDRQP 323

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EFT ++   A  + E +++    ++    +                 +    ++  +A A
Sbjct: 324 EFTQIDLEMAFVTQEDVLQLTEALVASMWKEGCGVDIP---------TPFTRMSFHDAMA 374

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQA 201
           +Y +    T  D        +    A
Sbjct: 375 QYGSDKPDTRFDMKITDATDVFSPHA 400



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 53/159 (33%), Gaps = 28/159 (17%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR------------F 258
           D         +     EP+           +P         +P D               
Sbjct: 523 DPKDFRFLWVVDFPLFEPHELEKGRLQACHHP-----FTAPHPDDADLVRAGGGAATRAR 577

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
            + F++    +EL      + DP  Q H  +  + E     +      E  L  L    P
Sbjct: 578 AQHFDVVVNGVELGGGSIRVHDPDLQLHILKDILHE-----DPAVF--EQLLGALRYGAP 630

Query: 318 QSSGIAMGFDR--LVMLV-TGANNINEVIWTPFSQSNQE 353
              GIA+GFDR  L ML  TGA ++ + +  P S + +E
Sbjct: 631 PHGGIALGFDRAMLCMLAQTGAVSLRDTMAFPKSFAGKE 669


>gi|323699397|ref|ZP_08111309.1| aspartyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459329|gb|EGB15194.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 606

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 21/189 (11%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY-LQ 79
            + RN    S+R Y     F+E+++  L   +P      R F     +    +   Y L 
Sbjct: 161 FILRNKAAQSVRRYLDALGFLEVETPVLTKSTPEG---ARDFLVPSRVN---QGEFYALP 214

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +      +      +
Sbjct: 215 QSPQLFKQMLMVAGMDRYFQIVKCFRDEDLRADRQPEFTQIDIEMSFVDEALIQDMAEGM 274

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +R                          +T A+A   Y  +D           D   +  
Sbjct: 275 VRTLFRETIGVNLP---------DPFPRMTFADAMRDY-GVDKPDLRFELKHID---ITD 321

Query: 200 QAQQAGIRV 208
             +++G +V
Sbjct: 322 VFKESGFKV 330



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 63/212 (29%), Gaps = 12/212 (5%)

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +  A +  ++   +Q+     FSE E  T+ E         L       D  +  L  L+
Sbjct: 366 KGLAWIKVKEDGEWQSPIVKFFSEAEIATLRERSGCKPGDILFFQAGPADVANAALGNLR 425

Query: 201 AQ-----QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            +                W   F  +  +  E              P     L       
Sbjct: 426 CELGKRFNLIREGEFKPVWITDFPLLEWDPDEKRFVARHHPFTSARPEQMQVLKE--DPG 483

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
               + +++     E+      +    +Q   F            E        +  L  
Sbjct: 484 QAIARAYDIVMNGFEVGGGSIRIHTEEQQEAMF----AALGIGKEEAEEKFGFLMNALRY 539

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DRL+M++TG+ +I +VI  P
Sbjct: 540 GAPPHGGIAFGLDRLIMILTGSKSIRDVIAFP 571


>gi|306826463|ref|ZP_07459774.1| aspartate--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304431322|gb|EFM34320.1| aspartate--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 582

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +   +   +      +           +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T+       +      A +   ++   D        ++   
Sbjct: 296 LQDLTVTVKGIDFKVFSDAPAVKAIVVKGNADRYSRKDIDKLAEF 340



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 402 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGNL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 462 VKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+   +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAEKDNIREVIAFP 550


>gi|77917544|ref|NP_001030093.1| probable asparaginyl-tRNA synthetase, mitochondrial [Rattus
           norvegicus]
 gi|74356254|gb|AAI04692.1| Asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) [Rattus
           norvegicus]
          Length = 391

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 76/274 (27%), Gaps = 29/274 (10%)

Query: 2   HQIPSQPWWN-RDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE 56
           H +  +          R       L  R+   +++  YF +N F+ I +  L  +     
Sbjct: 134 HPL--EYLRQYPHLRCRTNALGSILRVRSEATAAIHSYFKDNGFMHIHTPVLTSNDCEGA 191

Query: 57  THIRAFSTELII------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
             +  F  E         ++    P +L  S +    ++++    ++F F   +R     
Sbjct: 192 GEL--FQVEPSSKIKVPEENFFDVPAFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQ 248

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   +     Q +   M  +  A               C+ F       
Sbjct: 249 SRRHLAEFYMVEAEVSFVESLQDLMQVMEGLFKATTEMVLSHCPEDVELCHQFIASGQKD 308

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             E   +          +N             +QA         W         + +  +
Sbjct: 309 RLEHMLK----------NNFLIISYAEAIEILKQASQNFTFTPKWGVDLQTEHEKYLVRH 358

Query: 230 LGINCCTILDRYPAPESALANI-YPADPRFTKRF 262
            G      +  YP+            DP+ T+  
Sbjct: 359 CGNIPV-FVINYPSELKPFYMRENEDDPQNTEVA 391


>gi|313894864|ref|ZP_07828424.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976545|gb|EFR42000.1| aspartate--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 602

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 8/168 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                +  ++ R+ +   +R++F  + F+EI++  L + +P      R F     +    
Sbjct: 141 RRPEMQANIMLRHRVAKIMRDFFDRSGFLEIETPMLCKSTPEG---ARDFLVPSRLNAG- 196

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G EK F     +R+ +     QPEFT L+   +    E 
Sbjct: 197 --EFYALPQSPQIFKQLLMVSGFEKYFQIVRCFRDEDLRADRQPEFTQLDIEMSFMDQES 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++     +++   E              +     E     +   R+  
Sbjct: 255 ILSLMEELVKEVFEKTLGAHIETPLPRMSWDEAMERFGSDKPDLRFGM 302



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 50/165 (30%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+      ++  +    + E                 P  E         
Sbjct: 414 ELRLEMGRRRGLIDPDALSFLWVVDFPMFEYSAEEKRYKAMHHPFTAPRDEDIPMLATDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                  +++    +E+      +     Q   FE      +E +EK       +     
Sbjct: 474 GKVKANAYDMVLNGVEIGGGSLRIYRSDLQEQVFETLGLSPEEAREKFGFMMNAFE---- 529

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                   P   G+A G DRLVML+    +I +VI  P +QS  +
Sbjct: 530 -----YGTPPHGGLAFGLDRLVMLMAKRRSIRDVIPFPKTQSASD 569


>gi|262282065|ref|ZP_06059834.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262519|gb|EEY81216.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 578

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 56/180 (31%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            E   R+   D    L    +  R    L   +  +  A D     +   +      +  
Sbjct: 374 QELLTRFEAKDGDLILLVMAKKRRAREALGHLRLEVAKALDLIDPSLLHFLWVVDWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +             +  +++     E+      + D   Q   F
Sbjct: 434 WNEDQNRYQAMHHPFTQGIFEEGQEPGQFRSHAYDIVLNGYEIGGGSLRIHDRKAQEAMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        +  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 494 E-----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEQNIRQVIAFP 548



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 77/201 (38%), Gaps = 16/201 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     I  + 
Sbjct: 131 RREKMTHNLKVRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRI--YK 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKSVVKKTHGLELT---------EAFPTISYEEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDT 213
           +   L    +   I+ A D+ 
Sbjct: 296 NLTDLCQSNESLLIKKALDNQ 316


>gi|237736639|ref|ZP_04567120.1| aspartyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229420501|gb|EEO35548.1| aspartyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 598

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 71/200 (35%), Gaps = 21/200 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ +  ++R Y  +  FI++D+  L   +P      R F     I    
Sbjct: 135 RRPKMLNNLRMRHKMIMAIRNYMDKEGFIDVDTPLLNKSTPEGA---RDFLVPCRIN--- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ F  A  +R+ +     Q EFT L+   +    + 
Sbjct: 189 PGTFYALPQSPQLFKQLLMIAGVERYFQIAKCFRDEDLRADRQFEFTQLDVEMSFVEMDD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +        ++            +   +  AEA AR+   D        + 
Sbjct: 249 VMNTIEGLAKNVFTAITGEVAD---------YKFPRMPYAEAMARF-GSDKPDVRFGVEL 298

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            D   L   A+  G +   D
Sbjct: 299 KD---LTEIAKNCGFKAFKD 315



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 58/190 (30%), Gaps = 24/190 (12%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAH----DDTWSDIFSRILIEKIEPNLGI 232
           ++  ++   +   +     ++ + A +A +                  I  ++ +    +
Sbjct: 375 FSEEEMKAIIAKAEANPGDVILIIADKAKVVYGALGAMRLRIGKELDLINNDEFKFLWVV 434

Query: 233 NCCTILDR-----YPAPESALANIYPADPR----------FTKRFELYACNIELCNACDE 277
           +            Y A      +I   D             T  +++     E+      
Sbjct: 435 DFPMFTYDEEEGRYKAEHHPFTSIKAEDMESFLGGQTEGIRTNTYDMVLNGFEIGGGSIR 494

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGA 336
           + +P  Q   FE+        Y E       F+       P   G+A G DR +M++   
Sbjct: 495 IFNPEIQNKVFERLGLS----YEEAREKFGFFVDAFKYGAPPHGGLAFGIDRWLMVMLKE 550

Query: 337 NNINEVIWTP 346
            +I EVI  P
Sbjct: 551 ASIREVIPFP 560


>gi|187933861|ref|YP_001885235.1| aspartyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|238691638|sp|B2TN05|SYD_CLOBB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|187722014|gb|ACD23235.1| aspartate--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 599

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 62/182 (34%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+    S+R+Y  +N F+++++  L   +P     ++          ++
Sbjct: 139 RRPDMHRIFEIRSKTTKSIRDYLEKNDFLDVETPMLTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K +     +R+ +     QPEFT ++   +    + 
Sbjct: 193 RGMFYALPQSPQIFKQLLMVSGFDKYYQIVKCFRDEDLRANRQPEFTQVDMELSFVEQDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +                    + +T  +A  +Y   D        + 
Sbjct: 253 IMALNEGLIAHVFKEVAGVDVK---------LPIKRMTFKDAMEKY-GSDKPDLRFGMEI 302

Query: 192 PD 193
            +
Sbjct: 303 TN 304



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 51/153 (33%), Gaps = 9/153 (5%)

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
           L L  Q   I+  ++  ++ I    L E  E       C      P  E           
Sbjct: 415 LELAKQFELIKDKNEFNFTWITEFPLFEYSEEEERYTACHHPFTAPMEEDLEFLESAPGK 474

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--TYPIDEDFLACLT 314
             +K ++L     EL      + D   Q+  F      K   + E   +      L    
Sbjct: 475 VRSKAYDLVLNGEELGGGSIRIHDMELQQRMF------KALGFTEEQAWERFGFLLQAFK 528

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DR++M + G  NI +VI  P
Sbjct: 529 FGPPPHGGLAFGLDRMIMFLAGTENIKDVIAFP 561


>gi|62287533|sp|Q5X9E6|SYD_STRP6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 582

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +   +   +      +           +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T+       +      A +   ++   D        ++   
Sbjct: 296 LQDLTVTVKGIDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEF 340



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 402 ALRNRIARDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 462 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+   +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAEEDNIREVIAFP 550


>gi|229552366|ref|ZP_04441091.1| aspartate--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539737|ref|YP_003174236.1| aspartyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314268|gb|EEN80241.1| aspartate--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151413|emb|CAR90385.1| Aspartyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 601

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +  R  I  S+  Y  +N FI++++ +L   +P     ++            
Sbjct: 135 RRPEMQKNIFTRAHIMRSVHHYLDDNGFIDVETPTLTASTPEGARDYLVPSRVYPGSFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQPEFTQIDLETSFLSAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I                   +     + IT  EA  +Y +       D   Q
Sbjct: 249 IQDITEGLIAQVMHDVKG---------IDVDLPFQRITWQEAMDKYGSDKPDLRFDMQIQ 299

Query: 192 PDRHLLYL 199
                +  
Sbjct: 300 DVSDFVKD 307



 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 45/151 (29%), Gaps = 15/151 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
              G+    +  +  +    L E  E              P  E              + 
Sbjct: 414 HDLGLIDEKEFRFCWVVDWPLFEYDEGIQRWVPAHHPFTMPNEEDVHLLDTDPHAAHAQS 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEK-----EMQEKKKIYNETYPIDEDFLACL-TE 315
           +++     EL      + +   Q    +      E  +K              L  L   
Sbjct: 474 YDIVLNGYELGGGSIRIHNRDIQEKMLKALGFTPERAQKSFG---------FLLNALDYG 524

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   G+A+G DR  ML+TG +NI +VI  P
Sbjct: 525 FPPHGGLAIGLDRFTMLLTGRDNIRDVIAFP 555


>gi|310778225|ref|YP_003966558.1| aspartyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747548|gb|ADO82210.1| aspartyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 591

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 68/187 (36%), Gaps = 9/187 (4%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +  ++R Y  E  F+++D+  L   +P      +    T       + +     
Sbjct: 141 LKMRHKMLMAIRNYMDEKGFLDVDTPILTKSTPEGARDFLVPSRTNEGDFYALPQ----- 195

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    E ++ +   +
Sbjct: 196 -SPQLFKQLLMISGVERYYQIAKCFRDEDLRADRQPEFTQLDIEMSFVEMEDVINEIEGL 254

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
            +   +   ++   ++          E     +   R+  ++L    D            
Sbjct: 255 AKRVFQSVTEEAADYEFQRMEYAEAMERFGSDKPDIRF-GVELKELTDIMKNCGFKAFSG 313

Query: 200 QAQQAGI 206
            A   G+
Sbjct: 314 VANSGGL 320



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 13/146 (8%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           I          +   +     E               A +         D   T  ++L 
Sbjct: 420 INNDEYKFLWIVDFPMFEWSEEEERYKAQHHPFTSIKAEDMDAFMTGEMDKVRTNSYDLV 479

Query: 266 ACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
               E+      + +P  Q   FE+    E + ++K           F+       P   
Sbjct: 480 LNGAEIGGGSIRIHNPEVQAKVFERLGLSEEEAREKFG--------FFIDAFKYGAPPHG 531

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR +M++   ++I +VI  P
Sbjct: 532 GLAFGIDRWLMVMLKESSIRDVIPFP 557


>gi|197119275|ref|YP_002139702.1| aspartyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|238690895|sp|B5EIV1|SYD_GEOBB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|197088635|gb|ACH39906.1| aspartyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 593

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 50/152 (32%), Gaps = 13/152 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A + G+   +   +  I    L+E  E              P  E              
Sbjct: 419 LAAKMGLTDPNVFRFVWITDFPLLEWDEEAKRWAAVHHPFTAPMDEDLQYVESDPGRCRA 478

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT- 314
           K ++L     E+      +     Q   F+     E   + K            L  L  
Sbjct: 479 KAYDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEENARSKFG--------FLLDALEY 530

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DRL+ML+TG+++I +VI  P
Sbjct: 531 GTPPHGGIAFGLDRLMMLITGSDSIRDVIAFP 562



 Score = 96.6 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 72/199 (36%), Gaps = 21/199 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  L+ R+ +    R Y  +N FIE+++  L   +P      R F     I    +   Y
Sbjct: 146 QQNLMLRSKVAQLTRSYLSDNGFIELETPFLTKSTPEG---ARDFLVPSRIN---KGEFY 199

Query: 78  -LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E ++   
Sbjct: 200 ALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQPEFTQIDCEMSFIDREDIITVM 259

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             ++      A                  E +T  EA  R+  +D        +  +   
Sbjct: 260 EGLMARIFTEARGVKVE---------LPIERMTYQEAIRRF-GVDNPDLRFGLELVE--- 306

Query: 197 LYLQAQQAGIRVAHDDTWS 215
           L    + +G +V  D    
Sbjct: 307 LSDIVKNSGFKVFADVVNG 325


>gi|163859168|ref|YP_001633466.1| aspartyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|229470547|sp|A9IHE2|SYD_BORPD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|163262896|emb|CAP45199.1| aspS [Bordetella petrii]
          Length = 595

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 72/184 (39%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R  +   +R++  +  FI+I++  L   +P     ++            
Sbjct: 130 RRPQMQRNLMLRYRVSIEVRKFLDQLGFIDIETPMLTKSTPEGARDYLVPSRVNAGHFFA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 190 LPQ------SPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEVE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +   ++IR   +            N    +    +T  EA  RY +   DL  +L+  
Sbjct: 244 IRQIFEDMIRHVFKTV---------QNVELPAPFPQMTWTEAMQRYGSDKPDLRVSLEFT 294

Query: 190 DQPD 193
           D  D
Sbjct: 295 DVTD 298



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 48/146 (32%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++AG+  + D     +    + E  E +            P               F K 
Sbjct: 421 KKAGL-ASSDWKPLWVVDFPMFEYDEEDGRYTAAHHPFTSPKDGHEDFLESDPSKAFAKA 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     E+      +     Q   F    +  K    E        L  L    P   
Sbjct: 480 YDMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGAEEAREKFGFLLDALQYGAPPHG 535

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DR+V ++TGA +I +VI  P
Sbjct: 536 GIAFGLDRIVTMMTGAESIRDVIAFP 561


>gi|17545185|ref|NP_518587.1| aspartyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|24212408|sp|Q8Y270|SYD_RALSO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|17427476|emb|CAD13994.1| probable aspartyl-trna synthetase (aspartate--trna ligase)(asprs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 605

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 6/154 (3%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A+  G+          +    + E  E +            P  E              K
Sbjct: 421 AKSTGL-FEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGKCIAK 479

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            +++     E+      +     Q   F    +  K    E        L  L    P  
Sbjct: 480 AYDMVLNGWEIGGGSVRIYREEVQSKVF----RALKIGDEEARAKFGFLLDALQYGAPPH 535

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            GIA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 536 GGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQD 569



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 66/197 (33%), Gaps = 9/197 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y  +  FI+I++  L   +P     ++            
Sbjct: 131 RRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 186 -GQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLSEQE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +         +                +   R   ++     D    
Sbjct: 245 IRDLFEEMIRTVFQNTMSVALDAKFPVMEFREAMARFGSDKPDLRVK-LEFTELTDAMKD 303

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A   G RV
Sbjct: 304 VDFKVFSGPANAEGGRV 320


>gi|315655405|ref|ZP_07908305.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 51333]
 gi|315490345|gb|EFU79970.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 51333]
          Length = 599

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 11/213 (5%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RRR     L+ R+ I    R    E++F+EI++ +L   +P      R F     I   
Sbjct: 129 LRRRQLHDNLVLRSRISQIARRVMEEHEFLEIETPTLTRSTPEGA---RDFVVPARI--R 183

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+  G E+ F  A  +R+ +     QPEFT L+   +    + 
Sbjct: 184 PGSWYALPQSPQLFKQLLMVGGMERYFQLARCYRDEDSRADRQPEFTQLDMEMSFVDQDD 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++   ++++   +V    + +   +   PF E      ++        +L    D    
Sbjct: 244 VIEVTEHLLKEIWKVIGYDLTT--PIPRMPFQEAMDRFGSDKPDLRFGYELVDLTDFFKD 301

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
               +       A +           F +    
Sbjct: 302 TPFKIFQAPYVGAVVMPGGGSQPRRTFDKWQEW 334



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 11/113 (9%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
             + +P+    + +  DP       +++    +EL      +     Q   F      K 
Sbjct: 450 HAFTSPKPECLDTFDTDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQERVF------KV 503

Query: 297 KIY--NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +   E        L       P   G+A+G+DR+  ++TG+ +I +VI  P
Sbjct: 504 MGFSQEEAQARFGFLLDAFKYGAPPHGGLALGWDRIAGMLTGSPSIRDVIAFP 556


>gi|282859635|ref|ZP_06268737.1| aspartate--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282587553|gb|EFB92756.1| aspartate--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 585

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 72/220 (32%), Gaps = 8/220 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
                R  +  R+ +   +R +     F+E+++  L          R F     +     
Sbjct: 132 RRATVRKNMELRHKMTIMIRNFLDAQNFMEVETPIL--IGSTPEGARDFIVPSRMN--PG 187

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
           +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    + ++
Sbjct: 188 QFYALPQSPQTLKQLLMIAGFDRYFQIAKCFRDEDLRADRQPEFTQVDCEMSFVDQDDVI 247

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
                + R               +   P+ E      ++       ++    +D+     
Sbjct: 248 NMFEEMCRVLFREIRG--VELPKLEQMPWQEAMKRFGSDKPDLRFGMEFVELMDDLKGTG 305

Query: 194 RHLLYLQAQQAGIRVAHDD--TWSDIFSRILIEKIEPNLG 231
              ++ +A   G  V  +         + +      P +G
Sbjct: 306 EFSVFNEANYIGGIVVPNCAEYSRKQLNELTDFVKRPQVG 345



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L      + G+R  +      I    L E  +    +         P P          D
Sbjct: 406 LRLEMGDRLGLRDKNVFKCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPADLSLLDEHPD 465

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
                 ++     IE+      + D   Q   F++    K++            +     
Sbjct: 466 QVRALAYDFVCNGIEVGGGSIRIHDTKLQERMFKELGFTKER----AEEQFGFLMNAFKY 521

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A G DR V ++ G ++I + I  P
Sbjct: 522 GAPPHAGLAFGLDRFVSIMAGLDSIRDCIAFP 553


>gi|241895558|ref|ZP_04782854.1| aspartyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871136|gb|EER74887.1| aspartyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 601

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 68/194 (35%), Gaps = 8/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ I ++  E+   N FI+I++  L   +P     ++            
Sbjct: 134 RRPEMQRNLRIRSKITAATHEFLDANGFIDIETPYLAKSTPEGARDYLVPSRVYPGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A A+R+ +     QPEFT L+   +  + ++
Sbjct: 194 LPQ------SPQLFKQLLMGAGFDRYYQVARAFRDEDLRGDRQPEFTQLDVEMSFMNQDE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    + +    +           +    +++       +       ++L         
Sbjct: 248 IMDLVSDWVAAIMKRTVNYYLDKATIPVLDYADSMRRFGTDKPDMRFGMELQDLSALMAD 307

Query: 192 PDRHLLYLQAQQAG 205
            +  +     +  G
Sbjct: 308 AEFGVFANAIKNGG 321



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 51/155 (32%), Gaps = 7/155 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP--ESALANIY 252
            L    AQ+  +   ++  ++ + +  L +                 P       LA   
Sbjct: 408 ALRRRTAQELELIDENNWAFAWVVNWPLFDYQPEEDRWIAAHHPFTMPNEEDLPLLATTE 467

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
            A     + ++L     EL +    +     Q          K+      +      L  
Sbjct: 468 GAHQAHAQSYDLVLNGYELGSGSIRIHQMDVQEKMLAALGFTKEA----AHEAFGFLLEG 523

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   GIA+G DRL ML+ G +NI EVI  P
Sbjct: 524 MEYGFPPMGGIALGLDRLAMLLAGQDNIREVIAFP 558


>gi|325918028|ref|ZP_08180191.1| aspartyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535761|gb|EGD07594.1| aspartyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 583

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 78/229 (34%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 105 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 164

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 165 KATPEG---ARDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 218

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +           V+ +  ++   +
Sbjct: 219 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMIRSIFKEV---------VDVDLAAQFPRM 269

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D        +  D   L   ++      A +D    +
Sbjct: 270 TWAEAMRRY-GSDKPDLRIALELIDVAELVKASEFPVFTAAANDADGRV 317



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    +A       +    + E  +              PA +        A 
Sbjct: 403 ALRLKAGKDFKLIADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANAR 462

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 463 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 518

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 519 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 550


>gi|21911350|ref|NP_665618.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896724|ref|NP_803074.1| aspartyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|25009289|sp|Q8K5J0|SYD_STRP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21905565|gb|AAM80421.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811978|dbj|BAC64907.1| putative aspartyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 582

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +   +   +      +           +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMIAKVMKETKEIDVTLPLPRMSYDVAMNSYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T+       +      A +   ++   D        ++   
Sbjct: 296 LQDLTVTVKGIDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEF 340



 Score = 96.6 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 402 ALRNRIAKDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 462 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|327461765|gb|EGF08096.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327489050|gb|EGF20845.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 578

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 46/131 (35%), Gaps = 7/131 (5%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
           F  ++   +              +P  +             ++ +++     E+      
Sbjct: 423 FLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFEEGQDPAQFRSQAYDIVLNGYEIGGGSLR 482

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           + D   Q   FE        +  E Y  D   FL  L    P   G+A+G DRLVM++ G
Sbjct: 483 IHDRKAQEAMFE-----LLGMSQEDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAG 537

Query: 336 ANNINEVIWTP 346
             NI +VI  P
Sbjct: 538 EENIRQVIAFP 548



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 70/190 (36%), Gaps = 7/190 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +      +           +   R+  ++L +  D     
Sbjct: 246 RALVEAMLKAVVKKTHGLELTEAFPTISYEEAMSRFGSDKPDTRF-GLELKSLTDLCQSN 304

Query: 193 DRHLLYLQAQ 202
           D  L+     
Sbjct: 305 DSLLIKKALD 314


>gi|313205695|ref|YP_004044872.1| aspartyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312445011|gb|ADQ81366.1| aspartyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315022587|gb|EFT35613.1| aspartyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325336862|gb|ADZ13136.1| Aspartyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 582

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 72/226 (31%), Gaps = 25/226 (11%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
           L+ R+ +   +R Y     FIE+++  L   +P      R F     + +   +   L  
Sbjct: 141 LVFRSQMAQEVRNYLSNQGFIEVETPVLIKSTPEG---ARDFVVPSRMNE--GQFYALPQ 195

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E +M     + 
Sbjct: 196 SPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDIMNVFEGMT 255

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG--------TTLDNPDQP 192
               +    K F               ++ AEA  +Y N               +     
Sbjct: 256 THLLKKVTGKDFGT----------FPRMSFAEAMQKYGNDKPDIRFGMVFTELNEIVKGK 305

Query: 193 DRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEKIEPNLGINCCTI 237
           D  +        GI V    +        ++     P +G      
Sbjct: 306 DFKIFDEAELVVGINVEGCANYTRKQIDELIDWVKRPQIGATGMVW 351



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R   +     +    L+E  E     +        P  E        A
Sbjct: 404 ALRMELGNRLGLRKPDEFAPLWVIDFPLLEWDEETQRYHAMHHPFTSPKKEDLHLLENQA 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
           D      ++L     E+      + D   Q   F            E       FL    
Sbjct: 464 DKARANAYDLVLNGNEIGGGSIRIYDRNLQSKMFN-----LLGFTEEEAEAQFGFLMNAF 518

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A GFDRLV ++ G   I + I  P
Sbjct: 519 KYGAPPHGGLAFGFDRLVAILDGNEVIRDYIAFP 552


>gi|189424681|ref|YP_001951858.1| aspartyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189420940|gb|ACD95338.1| aspartyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 598

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 17/138 (12%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYP--APESALANIYPADPRFTKR--FELYACNIELCN 273
           F  I    +      +       +P  AP     +   +DP   +   ++L     E+  
Sbjct: 432 FVWITDFPLFEWDEDDKRWCAVHHPFTAPMDEDVDYVESDPGRCRAKAYDLVLNGNEIGG 491

Query: 274 ACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDR 328
               +     Q   F+     E  ++ K            L  L    P   GIA G DR
Sbjct: 492 GSIRIHQEHVQSLMFKMLGHSEEDKRAKFG--------FLLDALEYGTPPHGGIAFGMDR 543

Query: 329 LVMLVTGANNINEVIWTP 346
           L+ML+TG+++I +VI  P
Sbjct: 544 LIMLLTGSDSIRDVIAFP 561



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 76/199 (38%), Gaps = 23/199 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP     L+ R+ +    R+Y  +N F+E+++  L   +P      R F     I    
Sbjct: 140 RRPQLAQNLILRHQVAQVTRQYLTDNGFLELETPFLTKSTPEG---ARDFLVPSRIN--Q 194

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E +
Sbjct: 195 GQFYALPQSPQIFKQILMISGFDRYFQIVRCFRDEDLRADRQPEFTQIDCEMSFIDREDI 254

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     +I    + A                  E +T  EA  R+  +D        +  
Sbjct: 255 ITVMEGLIARVFKEAKGVEVQ---------LPVERMTYQEAIRRF-GVDNPDLRFGLELV 304

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    + +G +V ++
Sbjct: 305 E---LTDIVKGSGFKVFNE 320


>gi|319947812|ref|ZP_08022006.1| aspartyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319438536|gb|EFV93462.1| aspartyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 600

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 68/199 (34%), Gaps = 28/199 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            L  R+ + ++ R     + F+EI++ +L   +P      R 
Sbjct: 118 EARLRHRYLDLRREGPGAALRLRSKVNAAARGVLARHDFVEIETPTLTRSTPEG---ARD 174

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     +Q       Y L  SP+   + L+ AG EK +  A  +R+ +     QPEFT L
Sbjct: 175 FLVPARLQ---PGTFYALPQSPQLFKQLLMVAGMEKYYQLARCYRDEDFRADRQPEFTQL 231

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + ++     I+      A  +I +              +T  EA  RY + 
Sbjct: 232 DVEMSFVDQDDVIAVAEEILTEVWATAGYEITT----------PIPRMTYDEAMRRYGSD 281

Query: 181 DLGTTLDNPDQPDRHLLYL 199
                 D            
Sbjct: 282 KPDLRFDIELVECTEFFAD 300



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 32/106 (30%), Gaps = 5/106 (4%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P PE                +++     E+      +     Q   F       +    E
Sbjct: 454 PKPEHLDTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFGVMGISAE----E 509

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   L       P   GIA G+DR+  L+ G  +I +VI  P
Sbjct: 510 AQEKFGFLLDAFSYGAPPHGGIAFGWDRICALLAGTESIRDVIAFP 555


>gi|256825079|ref|YP_003149039.1| aspartyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688472|gb|ACV06274.1| aspartyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 610

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 71/199 (35%), Gaps = 25/199 (12%)

Query: 11  NRDFHYRRR--------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
            +  +   R          L  R+   ++ R    E+ F+E+++ +L   +P      R 
Sbjct: 124 LKHRYLDLRRPGKGSAGEALRLRSKANAAARRVLEEHAFVEVETPTLTRSTPEG---ARD 180

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +     K   L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+
Sbjct: 181 FLVPARL--APGKWYALPQSPQLFKQLLMVAGLERYYQIARCYRDEDFRADRQPEFTQLD 238

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  + E ++     I R    +             +  +    IT  EA  +Y   D
Sbjct: 239 IEMSFVTQEDVIALGEEIARALWALIG----------VDVPAPFPRITYTEAMEKY-GSD 287

Query: 182 LGTTLDNPDQPDRHLLYLQ 200
                 + +  D    + +
Sbjct: 288 KPDLRFDLELTDCTEFFAE 306



 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 5/89 (5%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
              +++     E+      +     Q   F+  M   +    E        L       P
Sbjct: 477 AYAYDMVCNGNEIGGGSIRVHRRDVQERIFKV-MGLSE---EEAQEKFGFLLEAFSYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              GIA G+DR+V L++G+++I  VI  P
Sbjct: 533 PHGGIAFGWDRIVALLSGSDSIRNVIAFP 561


>gi|134096004|ref|YP_001101079.1| aspartyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166225350|sp|A4G8X1|SYD_HERAR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|133739907|emb|CAL62958.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Herminiimonas arsenicoxydans]
          Length = 599

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 66/208 (31%), Gaps = 18/208 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R++     FI+I++  L   +P     ++            
Sbjct: 131 RRPQMQNNLRLRYKVTMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVPSRVNAGHFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFMNEQE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR               +N    +    +  A A   Y   D        + 
Sbjct: 245 IRDLFEGMIRLVF---------KNCLNVELPNPFPVMDYATAMGMY-GSDKPDMRVKLEF 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            D   +    +      A +     +  
Sbjct: 295 TDLTSIMKDVEFKVFSGAANMENGRVVG 322



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 47/146 (32%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+    +     +    + E  E +   +        P                +K 
Sbjct: 422 KKNGL-FDDEWRPLWVVDFPMFEYDEDSQRWSATHHPFTAPKDGHEDLMETNPGKCLSKA 480

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   F    +  K    E        L  L    P   
Sbjct: 481 YDMVLNGWELGGGSVRIHRAEVQSKVF----RALKISAEEAQLKFGFLLDALQYGAPPHG 536

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR+V ++TGA +I +VI  P
Sbjct: 537 GLAFGLDRIVTMMTGAESIRDVIAFP 562


>gi|328945231|gb|EGG39385.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 584

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRIHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +              +       +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKG---------IDVKLPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTELVKGVGFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 44/149 (29%), Gaps = 11/149 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +       +  +    + E  E              P  +S               
Sbjct: 409 KELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAVA 468

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           +++     EL      +     Q   F       K +        E F   L  +    P
Sbjct: 469 YDIVLNGYELGGGSLRINQKDLQERMF-------KALGFSAQEAAEQFGFLLEAMDYGFP 521

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              G+A+G DR VML+ G  NI EVI  P
Sbjct: 522 PHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|224367378|ref|YP_002601541.1| AspS [Desulfobacterium autotrophicum HRM2]
 gi|259511856|sp|C0QFI1|SYD_DESAH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|223690094|gb|ACN13377.1| AspS [Desulfobacterium autotrophicum HRM2]
          Length = 596

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 83/237 (35%), Gaps = 21/237 (8%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +         + +  ++ R+    ++R+Y  +  F++I++  L   +P     ++     
Sbjct: 134 KYRHLDLRRPKLQQNIIARHTASRAVRDYLNDLGFLDIETPFLTRSTPEGARDYLVPSRV 193

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   
Sbjct: 194 NHGQFYALPQ------SPQLFKQMLMISGFDRYYQIVRCFRDEDLRADRQPEFTQIDMEM 247

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    +++M+    +I+   +            + +     + IT AE+  R+  ID   
Sbjct: 248 SFVGEDEIMEITEGLIKTVFKRV---------RDIDLELPFQRITYAESIDRF-GIDRPD 297

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                +  D   L    +  G +V           + +  K   N        L  +
Sbjct: 298 MRFGLELND---LSDLVENTGFKVFASVVKKGGLVKAINAKGCANFTRKQIDELTDF 351



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 63/231 (27%), Gaps = 14/231 (6%)

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             ++ +   D +       +         +          ++ T  E  A    +D+   
Sbjct: 337 CANFTRKQIDELTDFAAIYKAKGLAWVKVKADGTWQSPIAKFFTDDEKKAIEVRLDMEKD 396

Query: 186 LDNPDQPDR---------HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
                  D           L    A++  +   +   +  +    L+E  E         
Sbjct: 397 DIVFFVADNPKITNEALGQLRNELARRLELIDNNTYRFVWVTHFPLVEYDEGEKRYQAIH 456

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P  E             ++ +++    IE+      +     Q            
Sbjct: 457 HPFTAPLEEDLEKLDTDPLNVRSRAYDMVLNGIEIGGGSIRIHSTELQEKVLNTLGI--- 513

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L +  P   G+A GFDRLVML+    +I +VI  P
Sbjct: 514 -GKEEANDKFGFLLNALGSGTPPHGGLAFGFDRLVMLLCQEESIRDVIAFP 563


>gi|119492409|ref|ZP_01623730.1| Aspartyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119453075|gb|EAW34244.1| Aspartyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 600

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 71/190 (37%), Gaps = 17/190 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQ-FIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
              R    L  R+ +  ++R +  + + FIEI++  L   +P      R +     +   
Sbjct: 136 RRDRMTRNLQLRHAVVKAMRRFLEDQEHFIEIETPILTRSTPEG---ARDYVLPSRVN-- 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +  AH +R+ +     QPEFT L+   +  S E+
Sbjct: 191 PGEWFALPQSPQLFKQLLMVSGMDRYYQIAHCFRDEDLRADRQPEFTQLDMEMSFMSQEE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +              +       +T AEA  RY   D   T    + 
Sbjct: 251 ILALNEALVAHIFKAVKG---------IDLPLPFPRLTYAEALNRY-GSDKPDTRFGLEL 300

Query: 192 PDRHLLYLQA 201
            D   L    
Sbjct: 301 VDVSDLVKDC 310



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 41/141 (29%), Gaps = 11/141 (7%)

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
           +   +  W   F        E  L          +P   +               ++L  
Sbjct: 431 KDQTNFLWVTDFPMFEWNADEKRLEALHHPFTAPHPDDLA------DLKTARALAYDLVL 484

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMG 325
              E+      +     Q   FE      +    E +      L       P   GIA G
Sbjct: 485 NGYEIGGGSLRIYQRDVQEKVFETIGLSIE----EAFNKFGFLLEAFEYGTPPHGGIAYG 540

Query: 326 FDRLVMLVTGANNINEVIWTP 346
            DRLVML+ G  +I +VI  P
Sbjct: 541 LDRLVMLLAGEESIRDVIAFP 561


>gi|310642825|ref|YP_003947583.1| tRNA synthetase class ii (d k and n) [Paenibacillus polymyxa SC2]
 gi|309247775|gb|ADO57342.1| tRNA synthetase class II (D K and N) [Paenibacillus polymyxa SC2]
          Length = 569

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 73/224 (32%), Gaps = 33/224 (14%)

Query: 1   MHQIP----SQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDS 46
           ++ +P    S      D   + R            ++ R+ +  S+R+  ++  F+EI +
Sbjct: 88  INPLPFEVSSAHEAREDLRLKYRFLDLRNENLHDNIVLRSRVIQSIRKKMIDLDFLEIQT 147

Query: 47  MSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
             L   SP     ++            + +      +P+   + L+ +G +K F  A  +
Sbjct: 148 PILTSSSPEGARDYLVPSRVHPGQFYALPQ------APQQFKQLLMVSGFDKYFQIAPCF 201

Query: 105 RNGEQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R+ +      P EF  L+   A  + E +     N++              +  N     
Sbjct: 202 RDEDARADRSPGEFYQLDLEMAFATQEDVFNVVENMLYEVF---------SEFTNYKISK 252

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
               I   EA  +Y   D     +     D   L+ +      +
Sbjct: 253 PFSRIPYQEAMLKY-GSDKPDLRNPLIIHDVTELFTETDFKVFK 295



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 52/180 (28%), Gaps = 9/180 (5%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           YA       L N ++    +     ++  +       +  I    + E       I    
Sbjct: 367 YALFFAADELKNVEKIAGAVRSQLGKRLDLLEKDTFKFCWIVDFPMFELDPDTHKIEFSH 426

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P                  ++++    IEL +      D       FE       
Sbjct: 427 NPFSMPQGGMDALLNMNPLDILAYQYDIVCNGIELSSGAVRNHDTEIMVKAFEI------ 480

Query: 297 KIY--NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             Y   E                P  +GIA G DR+VM++   +NI EVI  P +   Q+
Sbjct: 481 AGYTYEEIKSRFPALFNAFQFGPPPHAGIAPGIDRIVMILANESNIREVIAFPMNSKAQD 540


>gi|224437675|ref|ZP_03658622.1| aspartyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144122|ref|ZP_07806315.1| aspartyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129153|gb|EFR46770.1| aspartyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 579

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 66/213 (30%), Gaps = 28/213 (13%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R    +  F+E+++  L   +P     +
Sbjct: 118 NEELRLKYRYLDLRSPKAYNIFKIRSDAAIAARNSLQKMGFLEVETPILTKATPEGARDY 177

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G +K F  A  +R+ +     QPEFT
Sbjct: 178 LVPSRVHSGEFYALPQ------SPQLFKQLLMMSGFDKYFQIAKCFRDEDLRADRQPEFT 231

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      ++     +++       + I +              +   +A   Y 
Sbjct: 232 QIDIEMSFCEQNDIITMAETLLQDIFVACGESIQT----------PFMRMPYTQAMESYG 281

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
           +       + P      L      +    +A D
Sbjct: 282 SDKPDLRFEMPLVEVGDLFLDSNNEIFKNIAKD 314



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 46/137 (33%), Gaps = 8/137 (5%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           D+        +     E   G         +P       +    +   +  +++    IE
Sbjct: 419 DENMRKFLWVVDFPMFEKEDGKVKAL---HHPFTMPKDLDKDDVEEIESIAYDVVLNGIE 475

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRL 329
           L      +     Q+  FE          NE        L  L+   P   GIA+GFDRL
Sbjct: 476 LGGGSIRIHKDSIQKRVFE----LLGISNNEAQDKFGFLLEALSFGAPPHGGIAIGFDRL 531

Query: 330 VMLVTGANNINEVIWTP 346
           +ML+    +I +VI  P
Sbjct: 532 IMLLAKTQSIRDVIAFP 548


>gi|325068855|ref|ZP_08127528.1| aspartyl-tRNA synthetase [Actinomyces oris K20]
          Length = 599

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 67/192 (34%), Gaps = 27/192 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R  +  + R     + F+EI++ +L   +P      R 
Sbjct: 120 EARLRYRYLDLRRSAMQHAIRLRAKVSQAARRVLDSHDFVEIETPTLTRSTPEG---ARD 176

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+
Sbjct: 177 FLVPARL--APGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLD 234

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + ++    +++R    +   ++ +              +T  +A  +Y   D
Sbjct: 235 VEMSFVEQDDVIAVAEDVLREVWALIGYELPT----------PIARMTYHDAMEKY-GSD 283

Query: 182 LGTTLDNPDQPD 193
                   +  D
Sbjct: 284 KPDLRFGCELVD 295



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 34/119 (28%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                        P PE                +++     E+      +     Q   F
Sbjct: 443 KSAWTAVHHAFTSPKPECLETFDTDPASALAYAYDIVCNGNEIGGGSIRIHRSDVQERVF 502

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                       E        L       P   GIA G+DR+V L+T A++I +VI  P
Sbjct: 503 NVMGI----GEQEAQEKFGFLLDAFKFGAPPHGGIAFGWDRIVSLLTKADSIRDVIAFP 557


>gi|282877970|ref|ZP_06286779.1| aspartate--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299971|gb|EFA92331.1| aspartate--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 586

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 73/220 (33%), Gaps = 7/220 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +    QFIE+++  L   +P      R F     +    
Sbjct: 132 RRPTVRKNLELRHRMTILIRNFLDNEQFIEVETPILIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    N+ R   +         +                +   R+    +        + 
Sbjct: 247 IDLFENLCRHLFKEIRGVELPEKLQQMTWHEAMRRFGSDKPDLRFGMEFVELLDAFKGKA 306

Query: 193 DRHLLYLQAQQAGIRVAHDDTWS-DIFSRILIEKIEPNLG 231
           D  +    +   GI V    ++S      +      P +G
Sbjct: 307 DFSVFNEASYIGGICVPGCASYSRKQLDELSDFVKRPQVG 346



 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 49/154 (31%), Gaps = 9/154 (5%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           L     ++ G+R  +      I    +     E    +            +  L + +P 
Sbjct: 407 LRLEMGERLGLRDKNKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPE 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
             R  K ++     IE+      + D   Q+  FE           E         +   
Sbjct: 467 RVR-AKAYDFVCNGIEVGGGSLRIHDGQLQQKMFEIL-----GFTPEKAMAQFGFLINAF 520

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P  +G+A G DR V ++ G ++I + I  P
Sbjct: 521 KYGAPPHAGLAFGLDRFVSIMAGLDSIRDCIAFP 554


>gi|281412789|ref|YP_003346868.1| aspartyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373892|gb|ADA67454.1| aspartyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 579

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 69/193 (35%), Gaps = 7/193 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R +  ++ R  I   +R+YF E  F+EI++  L   +P      R F     +    
Sbjct: 130 RSERMKRNIILRYKISKIIRDYFDELGFLEIETPFLTRSTPEG---ARDFLVPSRL--RP 184

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E +
Sbjct: 185 GKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQPEFTQVDVEMSFVDVEDV 244

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     ++      ++                 E     +   RY  ++L       +  
Sbjct: 245 MNVSEGMVSRVFRESSGIDLKVPFDRIPYDEAMEKYGTDKPDRRY-GMELRDFGYAFETT 303

Query: 193 DRHLLYLQAQQAG 205
           +  ++     + G
Sbjct: 304 EFKVIRNVLDEGG 316



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 47/193 (24%), Gaps = 8/193 (4%)

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
               +   E   I   E                        L     + G          
Sbjct: 362 PHLKHLEKEFRKIAETENMNE--GDVCLIAAHTDRNLLNEALGTLRLEIGKEHFSHLAKG 419

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNA 274
                ++              +   +P     L  +         K ++L     E+   
Sbjct: 420 FDVLWVVDFPYFEWSEEEERFVARHHPFTMPVLETLGDDYTKVRAKAYDLVINGYEVGGG 479

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLV 333
              +     Q   FE           E       FL      +P   GIA G DRLV ++
Sbjct: 480 SIRIHRRDIQEKIFE----LLGLSEEEAQKKFGFFLEAFRYGVPPHGGIAFGLDRLVSII 535

Query: 334 TGANNINEVIWTP 346
            G ++I EVI  P
Sbjct: 536 AGESSIREVIAFP 548


>gi|325115894|emb|CBZ51448.1| Lysyl-tRNA synthetase, related [Neospora caninum Liverpool]
          Length = 2547

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 84/266 (31%), Gaps = 67/266 (25%)

Query: 152  FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA---------- 201
             S+Q    +       +T+ +A   Y  ID              L               
Sbjct: 2280 ISWQGHEIDLSGPWRRMTMVDALREYTGIDFERLSHQEAVRAVALRLQACSRTAQERSSA 2339

Query: 202  ---------------------QQAGIRVAHDDTWSDIFSRILIEKIEP-NLGINCCTILD 239
                                 ++AG +    +  + +   +     E     +   T ++
Sbjct: 2340 GSSSLSSEEQESADGAWAASVKKAGAKSLPPECLTSLEELMAFAFKEWVEKRLIQPTHIE 2399

Query: 240  RYPAPESALANIY----------PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
              P   S LA                    +RFE Y   +E+ +   EL DP+EQ  RF 
Sbjct: 2400 HTPLALSPLAAEKFTKDAGNDGTRRRLPVAERFETYVAGMEMADGYSELTDPLEQLKRFA 2459

Query: 290  KEMQEKKK---------IYNETYPID---------------EDFLACLT-EMPQSSGIAM 324
             + +E K                  D               ++F+A L   +P ++G+ +
Sbjct: 2460 SQRKEAKTSVDDHADACGGLTPETQDTKNQAEAKADRTVPNQEFIAALMLGLPPTAGLGI 2519

Query: 325  GFDRLVMLVTGANNINEVIWTPFSQS 350
            G DRLVML+T A  I +V+  P  +S
Sbjct: 2520 GLDRLVMLLTDAPLIRDVVHMPLRKS 2545



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 4/93 (4%)

Query: 56   ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKK-LLAAGEEKIFCFAHAWRNGEQGCLHQ 114
             +  R F + L     +  P++L+ +PE + K+ +++   +K+F     +RN      HQ
Sbjct: 2114 ASTARLFESYLH---ALDLPVHLRIAPELALKRLVVSGIADKVFEIGRCFRNEGISWRHQ 2170

Query: 115  PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
            PEF  +E Y    +YE ++     I+R  A   
Sbjct: 2171 PEFLSMEAYATFWTYEDMLALTEEILRLCAARV 2203



 Score = 47.3 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 60/191 (31%), Gaps = 21/191 (10%)

Query: 17   RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET--HIRAFSTELIIQDHI-- 72
            R R  L  R+ I  ++R   +   F+E+D+  L  +          A +T+ +    +  
Sbjct: 2006 RLREALRLRSFIVQTVRSKLLSEAFLEVDTAVLHAAAAPHRSKEKEAENTDKMQSKGLET 2065

Query: 73   ---RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE------FTMLEWY 123
                + L  + S   +  K LA                 +     PE        + E Y
Sbjct: 2066 ACAGEDLLGRVSQSPAQTKELAGAS--CQEKGTNQTTEARTRDGNPEERSASTARLFESY 2123

Query: 124  RAHESYEQLMKDCMN------IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
                     ++          ++   A+   +    F+N   +   +PE++++      +
Sbjct: 2124 LHALDLPVHLRIAPELALKRLVVSGIADKVFEIGRCFRNEGISWRHQPEFLSMEAYATFW 2183

Query: 178  ANIDLGTTLDN 188
               D+    + 
Sbjct: 2184 TYEDMLALTEE 2194


>gi|269837250|ref|YP_003319478.1| aspartyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786513|gb|ACZ38656.1| aspartyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 609

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 52/163 (31%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+       +  I      E  E N            P  E         
Sbjct: 425 RLRVALGHQLGLVNTDVHAFCWIVEMPFFEWDEENGRWEAAHHPFTSPMDEDLEILETDP 484

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                K +++     EL +    +     Q   FE         Y+E   I+  F   L 
Sbjct: 485 GRARAKAYDIVLDGWELGSGSIRIHRRDVQNKIFE------LMGYDEE-EIERRFGHLLR 537

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR VM++ G  NI EVI  P +QS Q+
Sbjct: 538 AFEYGAPPHGGIAPGIDRTVMILAGEENIREVIAFPKNQSAQD 580



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 66/181 (36%), Gaps = 15/181 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R +  L+ R+     +R+Y     FIEI++  L   +P      R +     I  + 
Sbjct: 146 RKPRMQRNLMLRHRAVKFIRDYLDARDFIEIETPVLVKSTPEGA---RDYVVPSRI--YP 200

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG ++ +  A  +R+ +Q    QPEFT L+   +    E +
Sbjct: 201 GHFYALPQSPQQLKQLLMVAGMDRYYQIARCFRDEDQRADRQPEFTQLDLEMSFVDVEDV 260

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     +     E    K    +            +T AEA  RY   D        +  
Sbjct: 261 LTLTEGLFTAMFEELATKPILQK--------PFPRLTYAEAILRY-GTDKPDLRFGMEIA 311

Query: 193 D 193
           D
Sbjct: 312 D 312


>gi|320537881|ref|ZP_08037795.1| aspartyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320145255|gb|EFW36957.1| aspartyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 610

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 51/158 (32%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     +   +   ++  +  I    L E  E     +    +   P  +         
Sbjct: 431 AVRSKLGKDLNLLNPNEFRFVWIIDFPLFEWNEDEQKWDPAHHMFSAPQEKYLATLETNQ 490

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  ++L     EL +    + DP  Q+  F      E E + K     E +     
Sbjct: 491 AEVKGDLYDLVLNGYELASGSIRIHDPELQKRIFKIVGFDESEAEAKFGFLTEAFK---- 546

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   GIA G DRLVML+ G  +I EVI  P
Sbjct: 547 -----YGAPPHGGIAPGLDRLVMLMAGETSIKEVIAFP 579



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 79/207 (38%), Gaps = 28/207 (13%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMS-LQY 51
           QI  +   N D   R R            ++ R+ +  ++RE+F  + F+EI++ + ++ 
Sbjct: 136 QIDEKTNANEDLRLRYRYLDLRSESMQKHIILRSRVSFAVREFFTNHGFLEIETPTFIKS 195

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ F  A  +R+ +  
Sbjct: 196 TPEGARDYLVPSRLYPGKFYALPQ------SPQLYKQILMVSGFDRYFQIARCYRDEDAR 249

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  S + +++    +++             + +N       E ++ 
Sbjct: 250 GDRQPEFTQIDVEMSFVSRDDVLRITEEMMQ---------FVFQKTMNITLPKTFERLSY 300

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLL 197
            +A   Y   D      +    D   +
Sbjct: 301 DDAINLY-GTDKPDLRFDMHMQDAAFM 326


>gi|294782756|ref|ZP_06748082.1| aspartate--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481397|gb|EFG29172.1| aspartate--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 592

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +  S+R Y  +  F+++D+  L   +P      +    T       
Sbjct: 136 RRSKMINNLKMRHRMIMSIRNYMDQAGFLDVDTPILTKSTPEGARDFLVPSRTNPGTFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDIEMSFVEKED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           + +  AEA  R+   D        + 
Sbjct: 250 VMNEIEGLAKYVFKNVTGEEANYT---------FQRMPYAEAMDRF-GSDKPDLRFAVEL 299

Query: 192 PD 193
            D
Sbjct: 300 KD 301



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 55/163 (33%), Gaps = 24/163 (14%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +   +    D  +  +    + +  E           + +P       ++       T+ 
Sbjct: 418 KDLDLINKDDFKFLWVVDFPMFDYDEEE----QRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 262 -----FELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLAC 312
                ++L     E+      + +P  Q   F++    + + K K           F+  
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFG--------FFIDA 525

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
                P   G+A G DR +M++    +I +VI  P  ++N+ +
Sbjct: 526 FKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFP--KTNKGQ 566


>gi|262066989|ref|ZP_06026601.1| aspartate--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291379295|gb|EFE86813.1| aspartate--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 592

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +  S+R Y  +  F+++D+  L   +P      +    T       
Sbjct: 136 RRSKMINNLKMRHRMIMSIRNYMDQAGFLDVDTPILTKSTPEGARDFLVPSRTNPGTFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDIEMSFVEKED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           + +  AEA  R+   D        + 
Sbjct: 250 VMNEIEGLAKYVFKNVTGEEANYT---------FQRMPYAEAMDRF-GSDKPDLRFAVEL 299

Query: 192 PD 193
            D
Sbjct: 300 KD 301



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 55/163 (33%), Gaps = 24/163 (14%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +   +    D  +  +    + +  E           + +P       ++       T+ 
Sbjct: 418 KDLDLINKDDFKFLWVVDFPMFDYDEEE----QRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 262 -----FELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLAC 312
                ++L     E+      + +P  Q   F++    + + K K           F+  
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFG--------FFIDA 525

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
                P   G+A G DR +M++    +I +VI  P  ++N+ +
Sbjct: 526 FKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFP--KTNKGQ 566


>gi|166712997|ref|ZP_02244204.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 588

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 78/229 (34%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 110 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEG---ARDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +           V+ +  ++   +
Sbjct: 224 LRADRQLEFTQLDMELAFVRERDVQDFVEDMIRAIFKEV---------VDVDLAAQFPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D        +  D   L   ++      A +D    +
Sbjct: 275 TWAEAMRRY-GSDKPDLRIALELVDVAELVKSSEFPVFTAAANDADGRV 322



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 46/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    V        +    + E  +              PA +        A 
Sbjct: 408 ALRLKAGKDFNLVVDGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANAR 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 468 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 524 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 555


>gi|327463737|gb|EGF10053.1| aspartate--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 584

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRIHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +              +       +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKG---------IDVKLPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTELVKGVDFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 44/149 (29%), Gaps = 11/149 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +       +  +    + E  E              P  +S               
Sbjct: 409 KELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDLSKVRAVA 468

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           +++     EL      +     Q   F       K +        E F   L  +    P
Sbjct: 469 YDIVLNGYELGGGSLRINQKDLQERMF-------KALGFSAQEAAEQFGFLLEAMDYGFP 521

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              G+A+G DR VML+ G  NI EVI  P
Sbjct: 522 PHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|298493063|ref|YP_003723240.1| aspartyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234981|gb|ADI66117.1| aspartyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 618

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 66/173 (38%), Gaps = 16/173 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
              R    +  R+ +  ++R Y  +   FIEI++  L   +P      R +     + + 
Sbjct: 159 RRERMAQNMQLRHQVVKAMRRYLEDTEGFIEIETPVLTRSTPEG---ARDYILPSRVNE- 214

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S  +
Sbjct: 215 -GEWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSENE 273

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +++    ++    +              +       +T  EA  +Y +    T
Sbjct: 274 IIELNEKLVCHIFKTV---------REIDLPHPFPRLTYKEAMDKYGSDKPDT 317



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 57/190 (30%), Gaps = 9/190 (4%)

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           N  P  + E IT   A A +  +         ++    +    A++  +       +  I
Sbjct: 403 NLTPEQKEEIITRTGAKAGHLLLFAAADTGTVNKTLDRIRQFVAREFNLIPPDKINFLWI 462

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
               + E      G+        +P       ++        + ++L     E+      
Sbjct: 463 TEFPMFEWNAEQKGLEAL----HHPFTAPHPDDLQDLKTARAQAYDLVFNGFEVGGGSLR 518

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           +     Q   FE           E        L       P   GIA G DRLVML+   
Sbjct: 519 IYKREIQEQVFEAIGLS----TEEAQNKFGFLLEAFEYGTPPHGGIAYGVDRLVMLLAEE 574

Query: 337 NNINEVIWTP 346
            +I +VI  P
Sbjct: 575 ESIRDVIAFP 584


>gi|218246650|ref|YP_002372021.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226736532|sp|B7JX16|SYD_CYAP8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218167128|gb|ACK65865.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 598

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 68/182 (37%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
              R    L  R+ +  ++R Y   E QF+EI++  L   +P      R +         
Sbjct: 136 RRDRMAKNLQLRHAVVKAMRRYLEDEQQFMEIETPILTRSTPEGA---RDYLVPSRAN-- 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   +  S E+
Sbjct: 191 PGQWYALPQSPQLFKQLLMVAGCDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSEEE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +                      +T A+A  +Y   D   T    + 
Sbjct: 251 ILRLNEGLVCHIFKSVKNLDIP---------RPFPRLTYAKAMEKY-GNDRPDTRFGLEL 300

Query: 192 PD 193
            D
Sbjct: 301 VD 302



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 40/130 (30%), Gaps = 5/130 (3%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I    +              +P       ++        + ++L    +E+      
Sbjct: 436 LLWITEFPMFEWNADEKRLEALHHPFTAPNPEDLDDLKTARAQAYDLVYNGVEVGGGSLR 495

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           +     Q   F       +    E Y      L       P   GIA G DRLVML+ G 
Sbjct: 496 IYQKDVQEKVFATIGLSME----EAYNKFGFLLEAFEYGTPPHGGIAYGLDRLVMLLAGE 551

Query: 337 NNINEVIWTP 346
           ++I +VI  P
Sbjct: 552 DSIRDVIAFP 561


>gi|222823655|ref|YP_002575229.1| aspartyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538877|gb|ACM63978.1| aspartyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 583

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 79/231 (34%), Gaps = 19/231 (8%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R       F+E+++  L   +P     +
Sbjct: 119 NEELRLKYRFLDLRSKKLYDNFALRSTACIAARNSLSNMGFLEVETPILTKATPEGARDY 178

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 179 LVPSRVHQGEFYALPQ------SPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFT 232

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPEYITVAEAFARY 177
            ++   +    + ++    N+++   +   ++I   F+ ++     E       +     
Sbjct: 233 QIDIEMSFCEQKDIIAMAENLLKDIFKACGKEISIPFRQMSYKEAMENYGSDKPDLRFDM 292

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             ID+       +      +    ++  I+         IFS+  +++ E 
Sbjct: 293 KFIDVIDIFVKSNNEIFANIAKDTKKNRIKALRVPKGDTIFSKRQMQRFEE 343



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
               +       +P       +    +   +   ++    +EL      +     Q   F
Sbjct: 436 EQNDDGSYSAMHHPFTMPKNIDEQDLEEISSIAHDVVLNGVELGGGSIRIHKSTIQEKVF 495

Query: 289 E----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           +     E +++KK            L  L+   P   GIA+G DRL+ML+T +++I EVI
Sbjct: 496 KLLNIDEEEQRKKFG--------FLLDALSFGAPPHGGIAIGLDRLIMLLTKSSSIREVI 547

Query: 344 WTP 346
             P
Sbjct: 548 AFP 550


>gi|291523618|emb|CBK81911.1| aspartyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 599

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 68/196 (34%), Gaps = 18/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+   + +R +  E  F+EI++  L   +P     ++            
Sbjct: 141 RRPDIQKNIMMRSRACAVIRNFLTEEGFLEIETPMLTKSTPEGARDYLVPSRVHPGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMVSGYDRYFQLARCFRDEDLRADRQPEFTQVDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                    + +T  EA  R+   D   T    + 
Sbjct: 255 VIDVNERLLARLFKEIIGVDVP---------LPIQRMTWQEAMDRF-GSDKPDTRFGMEL 304

Query: 192 PDRHLLYLQAQQAGIR 207
            D   +    + A  +
Sbjct: 305 NDVTDVVRDCEFAVFK 320



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 51/156 (32%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A + G+   +   +  +    L+E  +              P  E         
Sbjct: 415 ALRLELADKMGLLDKNQYNFLWVTEFPLLEWSDEENRFQAMHHPFTMPMEEDLQYIDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K++     +      L    
Sbjct: 475 GRVRAKAYDIVLNGTEIGGGSVRIHQDDIQEKMFEALGFTKER----AHEQFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRL+ML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLIMLMAKVDSIRDVIAFPKVK 566


>gi|156083701|ref|XP_001609334.1| aspartyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796585|gb|EDO05766.1| aspartyl-tRNA synthetase, putative [Babesia bovis]
          Length = 557

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 87/327 (26%), Gaps = 42/327 (12%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHI 59
           N+D     RP              ++ I    R + ++  FIEI S   L  +     + 
Sbjct: 255 NQDTRLDNRPLDLRATLNLAIFKIQSEICQQFRNFLLKRDFIEIHSPKLLGGTSEGGCN- 313

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
                 +    +      L  SP+   +  +     ++F     +R        H  EF 
Sbjct: 314 ------VFKLKYFDNDACLAQSPQLYKQLAVVGDFRRVFEIGPVFRAENSNTHRHLCEFV 367

Query: 119 MLEWYRAHESYEQLMKD-CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
            L+           + D   ++++      N +  +   +        E     +   R 
Sbjct: 368 GLDMEMEIRDNYMEVVDLIDDMLKHVFHGINTECKTEVEIFQKHQPSVEPFKWLDQTPRI 427

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
              +    L   +            ++         +S    + L   ++     +   I
Sbjct: 428 RFTEAVEMLRGTELA----------ESIPDDISSYDFSTEQEKRLGRLVKEKYNTD-YYI 476

Query: 238 LDRYPAPESALANIYPADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           +  YP        +        FT  ++ +    E+ +    + +P     R       K
Sbjct: 477 VYEYPLNARPFYTMPKERDGIMFTHSYDFFMRGEEILSGAQRIHNPDLLLQR------AK 530

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSG 321
           +   +        ++          +G
Sbjct: 531 ECGIDPKTI--SCYIEAFKMGASPHAG 555


>gi|50915178|ref|YP_061150.1| aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|50904252|gb|AAT87967.1| Aspartyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 599

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  + +FI++++  L   +P     ++ 
Sbjct: 139 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 198

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 199 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 252

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +   +   +      +           +   R+  +
Sbjct: 253 DLETSFLSEQEIQDIVEGMIAKVMKETKEIDVTLPFPRMSYDVAMNSYGSDKPDTRFEML 312

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T+       +      A +   ++   D        ++   
Sbjct: 313 LQDLTVTVKGIDFKVFSEAPAVKAIVVKGNADRYSRKDIDKLTEF 357



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +       +  +    + E  E              P PESA       
Sbjct: 419 ALRNRIARDLDMIDQSQFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTPESAHELEGDL 478

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +  +E        L  
Sbjct: 479 AKVRAIAYDIVLNGYELGGGSLRINQKEMQERMF------KALGFTADEANDQFGFLLEA 532

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+   +NI EVI  P
Sbjct: 533 MDYGFPPHGGLAIGLDRFVMLLAEEDNIREVIAFP 567


>gi|257899579|ref|ZP_05679232.1| aspartyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837491|gb|EEV62565.1| aspartyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 589

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 66/191 (34%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              +    +  RN    ++R Y  +N F++I++  L + +P     ++            
Sbjct: 135 RRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETTFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +                      +T  EA ARY   D   T    + 
Sbjct: 249 IQTYTEGLIAKVMKEVRG---------IEVALPFPRMTYDEAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQAQ 202
            D      + +
Sbjct: 299 IDLSETVKEVE 309



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +      E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEDIPLLAEDPAKVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q    +     K+++  E +      L  L    P   
Sbjct: 475 YDIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQM-EEQFG---FLLTALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DR  ML+ G +NI EVI  P
Sbjct: 531 GIALGLDRFAMLLAGEDNIREVIAFP 556


>gi|257885348|ref|ZP_05665001.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821204|gb|EEV48334.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 589

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              +    +  RN    ++R Y  +N F++I++  L + +P     ++            
Sbjct: 135 RRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETTFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +       +              +T  EA ARY   D   T  + + 
Sbjct: 249 IQTYTEGLIAKVMKEVRGIEVT---------LPFPRMTYDEAMARY-GSDKPDTRFDMEL 298

Query: 192 PD 193
            D
Sbjct: 299 ID 300



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 47/146 (32%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +      E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q    E     K+++  E +      L  L    P   
Sbjct: 475 YDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQM-EEQFG---FLLTALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DR  ML+ G +NI EVI  P
Sbjct: 531 GIALGLDRFAMLLAGEDNIREVIAFP 556


>gi|326201904|ref|ZP_08191774.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987699|gb|EGD48525.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 593

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 72/190 (37%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +    R+Y+ EN F+EI++  L   +P     ++            
Sbjct: 140 RRPDMQRNLILRHRVAKVARDYYDENAFLEIETPILIKSTPEGARDYLVPSRVHPGKFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +  + + 
Sbjct: 200 LPQ------SPQLYKQILMVSGYDRYFQIAKCFRDEDLRADRQPEFTQIDIEMSFVNVDD 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++     ++ A + A          N +  +    +  AEA  R+   D        + 
Sbjct: 254 VLEVNEGFVKKAFKEAL---------NIDVETPFLRMPYAEAMERF-GSDKPDIRFGMEL 303

Query: 192 PDRHLLYLQA 201
            +   +    
Sbjct: 304 INMSDMVANC 313



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/322 (13%), Positives = 84/322 (26%), Gaps = 40/322 (12%)

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           I++++  L                  +        +    P+      L    + +    
Sbjct: 272 IDVETPFL-----------------RMPYAEAMERFGSDKPDIRFGMELINMSDMVANCG 314

Query: 102 HAWRNGEQ----GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
                                  ++ R        +       +  A ++       ++ 
Sbjct: 315 FKVFTDAVAMGGSVRAINAKGCAKFSRKEIDALVEVVKTYKA-KGMAWISISPENEIKSS 373

Query: 158 NCNPFSEPEYITVAEA-FARYANIDLGTTLDNPDQPDR--HLLYLQAQQAGIRVAHDDTW 214
                SE E  ++ +   A   ++       N    D    L    A++  I    +  +
Sbjct: 374 FAKFMSEDEMKSILDRAQAEPGDLICFVADKNNVVFDALGQLRLEIARKLDILNPDEFKF 433

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
             +    L E  E              P  E              K +++    +EL   
Sbjct: 434 LWVTEFPLFEYDEDEQRWAAKHHPFTSPMDEDLEYLDTDPGRVRAKAYDMVLNGVELGGG 493

Query: 275 CDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDR 328
              +     Q   F      E++   K     E +             P   G+A G DR
Sbjct: 494 SIRIHIQELQAKMFKMLGFSEEDANRKFGFLLEAFK---------YGTPPHGGMAFGLDR 544

Query: 329 LVMLVTGANNINEVIWTPFSQS 350
           LVML+   N+I +VI  P  Q+
Sbjct: 545 LVMLMAKKNSIRDVIAFPKVQN 566


>gi|124266262|ref|YP_001020266.1| aspartyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|166225361|sp|A2SEP2|SYD_METPP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|124259037|gb|ABM94031.1| aspartyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 599

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 69/197 (35%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +   +R++   N FI+I++  L   +P     ++        +   
Sbjct: 131 RRPAMQKNLILRYRVAMEVRKFLDANGFIDIETPMLTKSTPEGARDYLVPSRVNEGMFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    E+
Sbjct: 191 LPQ------SPQLFKQLLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFLDEEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR                    ++E  +   ++       ++     +    
Sbjct: 245 IRGMFEGMIRTVFRAVM--NVELPGYPVMKYAEAMHRFGSDKPDLRVKMEFTELTEVMKD 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    AQ  G RV
Sbjct: 303 VDFKVFSAPAQAKGGRV 319



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 46/152 (30%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           ++G           +    + E  E              P                 K +
Sbjct: 421 KSGGLFEDKWAPLWVVDFPMFEHDEEGDRWAAVHNPFTAPKDGHEDLMDTDPGKCIAKAY 480

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     EL      +     Q   F       K   +E        L  L    P   G
Sbjct: 481 DMVLNGWELGGGSVRIHRAEVQSKVF----SALKIGPDEAQLKFGFLLDALQYGAPPHGG 536

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           +A G DRLV L+T A++I +VI  P +Q  Q+
Sbjct: 537 LAFGLDRLVTLMTKADSIRDVIAFPKTQRAQD 568


>gi|50310079|ref|XP_455053.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644188|emb|CAH00140.1| KLLA0E24465p [Kluyveromyces lactis]
          Length = 645

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 10/122 (8%)

Query: 239 DRYPAPESALANIYPADPR----FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             +P     L +    +        + ++L    +EL      + DP  Q + F + +  
Sbjct: 509 THHPFTMVNLRDYNKLESDPLSCHGEHYDLVVNGVELGGGSTRIHDPELQNYIFHEILNI 568

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           K       +      L       P  +G A+GFDR+  ++ G+ +I +VI  P S S  +
Sbjct: 569 KNPEDLFGH-----LLNAFKMGTPPHAGFAIGFDRMCAMLCGSESIRDVIAFPKSISGVD 623

Query: 354 EI 355
           ++
Sbjct: 624 KV 625



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 80/241 (33%), Gaps = 8/241 (3%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +    + +  L  R     ++R       F E+++  L + +P      R F 
Sbjct: 147 PPEYRYLQLRLPKYQNNLKLRYEASKNVRTVLDSLNFTEVETPLLFKSTPEG---AREFL 203

Query: 64  TELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
                +       Y L  SP+   + L+A+G  + F  A  +R+ +     QPEFT ++ 
Sbjct: 204 VPTRGKIDGEASFYALPQSPQQYKQLLIASGVNRYFQVARCFRDEDLRSDRQPEFTQVDL 263

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             A  S + + +    +I       +        ++      P   T       Y  +  
Sbjct: 264 EMAFSSGKDVREVVEKVITSTWNKLHASGTDLHTLDRTGKIIPVSGTEKIINLTYQQVMT 323

Query: 183 GTTLDNPDQ--PDRHLLYL-QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
              +D PD   PD  L+ L + +  G        +  I  R   E +E            
Sbjct: 324 QYGIDKPDLRYPDLKLMDLSEFKAYGYTNKEFPVFEVIVLRKAFETVEEFHRDWSYLSNK 383

Query: 240 R 240
            
Sbjct: 384 D 384


>gi|194366904|ref|YP_002029514.1| aspartyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|238693500|sp|B4ST40|SYD_STRM5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194349708|gb|ACF52831.1| aspartyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 583

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 76/229 (33%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +  E  F +I++  L 
Sbjct: 105 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIETPILT 164

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 165 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 218

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +           VN    +    +
Sbjct: 219 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMIRGIFKEV---------VNVELDASFPRM 269

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D        +  D   L   ++        +D    +
Sbjct: 270 TWAEAMRRY-GSDKPDLRIALELVDVAELVKNSEFPVFTGPANDADGRV 317



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    VA       +    + E  E              PA +        A 
Sbjct: 403 ALRLKAGKDFGLVADGWAPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIADLRANAR 462

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 463 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 518

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 519 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 550


>gi|260893519|ref|YP_003239616.1| aspartyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865660|gb|ACX52766.1| aspartyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 597

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+     +R+Y   + F E+++  L   +P     ++            
Sbjct: 135 RRPEMQEALRLRHRAAKVVRDYLDAHGFWEVETPMLTRSTPEGARDYLVPSRIYPGRFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 195 LPQ------SPQLFKQLLMVAGVDRYFQIVRCFRDEDLRADRQPEFTQIDLEMSFVEVED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +I            S              I+  EA + Y   D      +   
Sbjct: 249 ILRLSEGLIATLCREIVGVEVS---------LPFPRISYQEAMSLY-GTDRPDIRYDLLL 298

Query: 192 PDRHLLYLQAQ 202
            D   L  + +
Sbjct: 299 TDVSDLVAEVE 309



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 49/155 (31%), Gaps = 6/155 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            AQ+ G+          +   ++         +         P  E         +    
Sbjct: 413 LAQKLGLEKPGLSFVWVVDFPLVEFDPAEGRYVTLHHPFTA-PREEDVPLLETEPEKVRA 471

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           K ++L    +EL      +     Q   F    +       E        L  L    P 
Sbjct: 472 KAYDLVLNGVELGGGSIRINRRDLQEKVF----RLIGLDLEEARDKFGFLLEALEYGAPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             GIA GFDRL+ML+ G   I +VI  P +Q  Q+
Sbjct: 528 HGGIAFGFDRLLMLLLGRQTIRDVIPFPKTQRAQD 562


>gi|223932851|ref|ZP_03624847.1| aspartyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|330833744|ref|YP_004402569.1| aspartyl-tRNA synthetase [Streptococcus suis ST3]
 gi|223898432|gb|EEF64797.1| aspartyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|329307967|gb|AEB82383.1| aspartyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 583

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  I    + E  E              P  E+A       
Sbjct: 402 ALRNRLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +   + +      L  
Sbjct: 462 AQVRAVAYDIVLNGYELGGGSLRINQKDMQERMF------KALGFSAEDAHEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFP 550



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 70/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  +  ++      +I    +       +             +    +   R+  +
Sbjct: 236 DLETSFLNEVEIQDIVEGLIAKVLKDTKGIDVTLPFPRMAYDHAMNFYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYL-QAQQAGIRVAHDDTWSDIFSRILIE 224
               T    +   +        +   ++ A D        ++   
Sbjct: 296 LQDLTELVKEVDFKVFSEAPVVKAIVVKGAADCYSRKDIDKLTDY 340


>gi|302024636|ref|ZP_07249847.1| aspartyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 505

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  I    + E  E              P  E+A       
Sbjct: 324 ALRNRLAKEQGLIDESKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTEETAHHLDGDL 383

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +   + +      L  
Sbjct: 384 AQVRAVAYDIVLNGYELGGGSLRINQKDMQERMF------KALGFSAEDAHEQFGFLLEA 437

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 438 MDYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFP 472



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 70/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 44  DTRLRYRYLDLRRPEMLNNFKLRAAVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYLV 103

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 104 PSRVSKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 157

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  +  ++      +I    +       +             +    +   R+  +
Sbjct: 158 DLETSFLNEVEIQDIVEGLIAKVLKDTKGIDVTLPFPRMAYDHAMNFYGSDKPDTRFEML 217

Query: 181 DLGTTLDNPDQPDRHLLYL-QAQQAGIRVAHDDTWSDIFSRILIE 224
               T    +   +        +   ++ A D        ++   
Sbjct: 218 LQDLTELVKEVDFKVFSEAPVVKAIVVKGAADCYSRKDIDKLTDY 262


>gi|228477954|ref|ZP_04062565.1| aspartyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250134|gb|EEK09387.1| aspartyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 583

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/226 (11%), Positives = 71/226 (31%), Gaps = 21/226 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  ++R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRMRYRYLDLRRPEMLENFKLRAKVTHAIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +      +           +   R+  +
Sbjct: 236 DLETSFLNEQEIQDITEGLIAKVMKETKGIEVTLPFPRMSYDDAMNNYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
             DL   +   D           +   ++   D        ++   
Sbjct: 296 LQDLTEVVKGVDFKVFAEAPAV-KAIVVKGNADKYSRKSIDKLTEF 340



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +SA       
Sbjct: 402 ALRNQIAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                  +++     EL      +     Q          K   ++E    ++    L  
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINHKDLQERML------KALGFSEESAYEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|255082085|ref|XP_002508261.1| predicted protein [Micromonas sp. RCC299]
 gi|226523537|gb|ACO69519.1| predicted protein [Micromonas sp. RCC299]
          Length = 666

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 70/185 (37%), Gaps = 23/185 (12%)

Query: 18  RRP----FLLKRNMIQSSLREYFVE-NQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
           RRP     L  R     +LR+   + + F+E+++  L   +P     ++     +     
Sbjct: 203 RRPQMVRNLRLRAKTVRALRKVLEDTHDFLEVETPILTRSTPEGARDYLVPSRLQPGACF 262

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   +    +
Sbjct: 263 ALPQ------SPQLFKQMLMVAGADRYYQVARCFRDEDLRADRQPEFTQLDIEMSFTDMD 316

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++    +++  A           +  + +       +T AEA ++Y   D        +
Sbjct: 317 GILNLGEDLMCAAF---------KEGADVDLPRPFRRMTYAEAMSKY-GSDKPDVRYGLE 366

Query: 191 QPDRH 195
             +  
Sbjct: 367 MAELA 371



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 16/152 (10%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A+   +          I    + E  E    +         P  +  +AN          
Sbjct: 489 AKTLDMVPEGQHAVLWITDFPMFEWNEDENRLEALHHPFTAPN-QEDVANGGDIKQARAI 547

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACLT 314
            ++L    +E+      +     Q   F      ++E +EK     E +           
Sbjct: 548 AYDLVYNGVEVGGGSLRIYRRDVQEKVFDAIGLGKEEAEEKFGYLMEAFQF--------- 598

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   G+A G DRLVM++ GA +I +VI  P
Sbjct: 599 GAPPHGGMAFGLDRLVMMLAGAKSIRDVIAFP 630


>gi|315656682|ref|ZP_07909569.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492637|gb|EFU82241.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 599

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 11/213 (5%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RRR     L+ R+ I    R    E++F+EI++ +L   +P      R F     I   
Sbjct: 129 LRRRQLHDNLVLRSRISQIARRVMEEHEFLEIETPTLTRSTPEG---ARDFVVPARI--R 183

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+  G E+ F  A  +R+ +     QPEFT L+   +    + 
Sbjct: 184 PGSWYALPQSPQLFKQLLMVGGMERYFQLARCYRDEDSRADRQPEFTQLDMEMSFVDQDD 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++   ++++   +V    + +   +   PF E      ++        +L    D    
Sbjct: 244 VIEVTEHLLKEIWKVIGYDLTT--PIPRMPFQEAMDRFGSDKPDLRFGYELVDLTDFFKD 301

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
               +       A +           F +    
Sbjct: 302 TPFKIFQAPYVGAVVMPGGGSQPRRTFDKWQEW 334



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 11/111 (9%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P+    + +  DP       +++    +EL      +     Q   F      K   
Sbjct: 452 FTSPKPECLDTFDTDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQERVF------KVMG 505

Query: 299 Y--NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +   E        L       P   G+A+G+DR+  ++TG+ +I +VI  P
Sbjct: 506 FSQEEAQARFGFLLDAFKYGAPPHGGLALGWDRIAGMLTGSPSIRDVIAFP 556


>gi|327403473|ref|YP_004344311.1| aspartyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318981|gb|AEA43473.1| aspartyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 585

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 21/189 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR P    L  RN +    R++     F+++++  L   +P      R F     +   
Sbjct: 136 LRRNPVQQKLRLRNHVALETRKFLDSKGFLDVETPYLIKSTPEGA---RDFVVPSRMN-- 190

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            +   Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   A    E
Sbjct: 191 -QGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     +I+   +      F               +T AEA  +Y   D        +
Sbjct: 250 DILNMFEGLIKHLFQTVRGITFEGD---------FPRMTYAEAMEKY-GSDKPDIRFGME 299

Query: 191 QPDRHLLYL 199
             D   L  
Sbjct: 300 FTDLKTLSA 308



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 59/182 (32%), Gaps = 8/182 (4%)

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ---QAGIRVAHDDTWSDIFSRILIEK 225
           T AEA    A   +       D+  + +  L+ +   + G+R   D     +    L+E 
Sbjct: 380 TWAEASGAKAGDLIFVLSGELDKTRKQMNELRLRMGTELGLRKPDDFKPLWVLDFPLLEW 439

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E +   +        P PE                ++L    +EL      + D   Q 
Sbjct: 440 DENSGRYHAMHHPFTSPKPEDFSLIDTEPGKVRANAYDLAMNGVELGGGSIRIHDRALQS 499

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             FE           +        L       P   G+A G DRLV  + G+++I + I 
Sbjct: 500 RMFE----LLGFTPEQAQEQFGFLLNAFEYGAPPHGGLAFGLDRLVATMGGSDSIRDYIA 555

Query: 345 TP 346
            P
Sbjct: 556 FP 557


>gi|323144092|ref|ZP_08078733.1| aspartate--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322416134|gb|EFY06827.1| aspartate--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 587

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 55/161 (34%), Gaps = 20/161 (12%)

Query: 3   QIPSQPWWN--RDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     +   +   R R            +  R  I   +R +   + F++I++  L 
Sbjct: 107 PLPIDFNQDNTEEQRLRYRYLDLRRPEMVHKMTVRAYITRYVRHFLDAHGFLDIETPMLT 166

Query: 51  -YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P     ++            + +      SP+   + L+ AG ++ +     +R+ +
Sbjct: 167 KATPEGARDYLVPSRIHHGKFYALPQ------SPQLFKQLLMIAGYDRYYQIVKCFRDED 220

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ 149
                QPEFT ++   +  + + +      ++    +    
Sbjct: 221 LRADRQPEFTQIDVETSFMTSQDVRDIMEEMMVGLFKEVAG 261



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 15/151 (9%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A+  G+ VA       +    + E  E   G+         P+  +    I      +  
Sbjct: 414 AKDKGL-VADGYKALWVIDFPMFEMTEE-AGLTAMHHPFTAPSGVTPEELIANPMSVYAD 471

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-E 315
            ++L     E       + D   Q+  F+     + + ++K            L  L+  
Sbjct: 472 AYDLVINGYESGGGSVRIYDENMQQAVFKVLGITDSEAREKFG--------FLLDALSFG 523

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DR+ ML+TG +NI +VI  P
Sbjct: 524 APPHAGLAFGLDRVTMLLTGTDNIRDVIAFP 554


>gi|304389435|ref|ZP_07371398.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304327245|gb|EFL94480.1| aspartate--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 599

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 11/213 (5%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RRR     L+ R+ I    R    E++F+EI++ +L   +P      R F     I   
Sbjct: 129 LRRRQLHDNLVLRSRISQIARRVMEEHEFLEIETPTLTRSTPEG---ARDFVVPARI--R 183

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+  G E+ F  A  +R+ +     QPEFT L+   +    + 
Sbjct: 184 PGSWYALPQSPQLFKQLLMVGGMERYFQLARCYRDEDSRADRQPEFTQLDMEMSFVDQDD 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++   ++++   +V    + +   +   PF E      ++        +L    D    
Sbjct: 244 VIEVTEHLLKEIWKVIGYDLTT--PIPRMPFQEAMDRFGSDKPDLRFGYELVDLTDFFKD 301

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
               +       A +           F +    
Sbjct: 302 TPFKIFQAPYVGAVVMPGGGSQPRRTFDKWQEW 334



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 11/111 (9%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P+    + +  DP       +++    +EL      +     Q   F      K   
Sbjct: 452 FTSPKPECLDTFDTDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQERVF------KVMG 505

Query: 299 Y--NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +   E        L       P   G+A+G+DR+  ++TG+ +I +VI  P
Sbjct: 506 FSQEEAQARFGFLLDAFKYGAPPHGGLALGWDRIAGMLTGSPSIRDVIAFP 556


>gi|237740162|ref|ZP_04570643.1| aspartyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229422179|gb|EEO37226.1| aspartyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 592

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +  S+R Y  +  F+++D+  L   +P      +    T       
Sbjct: 136 RRSKMINNLKMRHRMIMSIRNYMDQAGFLDVDTPILTKSTPEGARDFLVPSRTNPGTFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDIEMSFVEKED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           + +  AEA  R+   D        + 
Sbjct: 250 VMNEIEGLAKYVFKNVTGEEANYT---------FQRMPYAEAMDRF-GSDKPDLRFAVEL 299

Query: 192 PD 193
            D
Sbjct: 300 KD 301



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 55/163 (33%), Gaps = 24/163 (14%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +   +    D  +  +    + +  E           + +P       ++       T+ 
Sbjct: 418 KDLDLINKDDFKFLWVVDFPMFDYDEEE----QRYKAEHHPFTSIKAEDLDKFLAGQTED 473

Query: 262 -----FELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLAC 312
                ++L     E+      + +P  Q   F++    + + K K           FL  
Sbjct: 474 IRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFG--------FFLDA 525

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
                P   G+A G DR +M++    +I +VI  P  ++N+ +
Sbjct: 526 FKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFP--KTNKGQ 566


>gi|239624495|ref|ZP_04667526.1| aspartyl-tRNA synthetase [Clostridiales bacterium 1_7_47_FAA]
 gi|239520881|gb|EEQ60747.1| aspartyl-tRNA synthetase [Clostridiales bacterium 1_7_47FAA]
          Length = 602

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 69/191 (36%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ + +  R +  E  F+EI++ +L   +P     ++            
Sbjct: 141 RRPDLQRNLITRSRVATLTRAFLAEEGFLEIETPTLIKSTPEGARDYLVPSRVHPGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMCSGYDRYFQLARCYRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++   +            N +     + +T  EA  RY   D        + 
Sbjct: 255 VLDVNERLLQKLFKEI---------CNFDVQLPIQRMTWREAMDRY-GSDKPDLRFGMEL 304

Query: 192 PDRHLLYLQAQ 202
            +   +    +
Sbjct: 305 KNVSQVVKDCE 315



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q G+    D  +  +    L+E  E              P  E         
Sbjct: 415 NLRLELARQLGLLKKDDFKFLWVTEFPLLEYSEEEDRYVAMHHPFTMPMDEDIQYIDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                K +++    +E+      +     Q   FE           E         L+  
Sbjct: 475 GRVRAKAYDIVLNGVEMGGGSVRIHQADIQSKMFEVL-----GFTPERANEQFGFLLSAF 529

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              +P  +G+A G DR+VML+ GA++I +VI  P  +
Sbjct: 530 KYGVPPHAGLAYGLDRVVMLMVGADSIRDVIAFPKVK 566


>gi|158320738|ref|YP_001513245.1| aspartyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158140937|gb|ABW19249.1| aspartyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 588

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R+ +   +R +     F+EI++  L   +P     ++            
Sbjct: 134 RKSKMQKNLILRHKVAQIVRNFLSNEGFLEIETPMLTKTTPEGARDYLVPSRVNPGKFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ F     +R+ +     QPEFT ++   +  + E 
Sbjct: 194 LPQ------SPQMFKQLLMVSGMERYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVNAED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +++   + A          N +     + +T  EA  R+   D   T    + 
Sbjct: 248 VMAINEKLLQTVFKEAL---------NIDIALPFDRLTYEEAMERF-GSDKPDTRFGFEL 297

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 298 VDLGEVIKDC 307



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 51/159 (32%), Gaps = 9/159 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A+   +    +     +    L E  E              P  E     +   
Sbjct: 408 HLRVEVAKILNMLDKDEFKLLWVTEFPLFEYDEEEQRYAAKHHPFTSPMDEDIELMVTNP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
           +    K +++     E+      +     Q+  F      K       E +      L  
Sbjct: 468 EKARAKAYDIVLNGYEIGGGSIRIHSSELQQKMF------KALGFSEEEAWEKFGFLLEA 521

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                P   GIA G DRLVML+T  +NI +VI  P +Q+
Sbjct: 522 FKYGTPPHGGIAFGLDRLVMLLTKEDNIRQVIAFPKTQN 560


>gi|323509049|dbj|BAJ77417.1| cgd7_1540 [Cryptosporidium parvum]
          Length = 250

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 82/268 (30%), Gaps = 31/268 (11%)

Query: 88  KLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV 146
             +    E++F     +R        H  EF  ++     E+    + D  + +      
Sbjct: 1   MSICGDLERVFEIGPVFRAENSNTHRHLCEFVGVDIEMNIENTYHELVDVFDAMFRHIFQ 60

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
                   + +  + ++      ++E   R                         ++AG 
Sbjct: 61  GINTHCKNELLIVSEYNPFTPFVISEKTPRLT---------------FEEGCNLLKEAGA 105

Query: 207 RVAHDDTWSDI---FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP--RFTKR 261
            +  D +  DI     R+L   ++     +   +L +YP        +   D   +++  
Sbjct: 106 EIPEDLSDFDISTEQERLLGSIVKEKYNSDFYMML-KYPLKVRPFYTMPDFDEPEKWSNS 164

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           F+ +    E+ +    + D      R ++            + +  D+L       P   
Sbjct: 165 FDFFMRGEEILSGAQRVHDYDLLVKRCQEC-------GVSEHSL-RDYLNSFKLGAPPHG 216

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFS 348
           G  +G +R++ML     NI +    P  
Sbjct: 217 GCGIGLERVIMLFLNLGNIRKSSMFPRD 244


>gi|293571372|ref|ZP_06682403.1| aspartyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291608588|gb|EFF37879.1| aspartyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 589

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 66/191 (34%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              +    +  RN    ++R Y  +N F++I++  L + +P     ++            
Sbjct: 135 RRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETTFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +                      +T  EA ARY   D   T    + 
Sbjct: 249 IQTYTEGLIAKVMKEVRG---------IEVALPFPRMTYDEAMARY-GSDKPDTRFEMEL 298

Query: 192 PDRHLLYLQAQ 202
            D      + +
Sbjct: 299 IDLSETVKEVE 309



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +      E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKAEDIPLLAEDPAKVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q    +     K+++  E +      L  L    P   
Sbjct: 475 YDIVLNGYELGGGSIRIHTRELQEKVLKTLGFTKEQM-EEQFG---FLLTALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DR  ML+ G +NI EVI  P
Sbjct: 531 GIALGLDRFAMLLAGEDNIREVIAFP 556


>gi|288906391|ref|YP_003431613.1| aspartyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|306832438|ref|ZP_07465591.1| aspartate--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325979405|ref|YP_004289121.1| Aspartyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288733117|emb|CBI14698.1| aspartyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|304425478|gb|EFM28597.1| aspartate--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325179333|emb|CBZ49377.1| Aspartyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 582

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 70/223 (31%), Gaps = 27/223 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +       R  +  S+R Y  E +FI++++  L   +P     ++            
Sbjct: 133 RRPKMLNNFKLRAKVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYLVPSRVSQGHFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT ++   +  S + 
Sbjct: 193 LPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDMETSFLSDQD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +       +              ++  +A   Y +    T  +   Q
Sbjct: 247 IQDITEGMIAKVMKDTKGIDVT---------LPFPRMSYDDAMNNYGSDKPDTRFEMLLQ 297

Query: 192 PDRHLLYL----------QAQQAGIRVAHDDTWSDIFSRILIE 224
               ++              +   ++   D        ++   
Sbjct: 298 DLTEVVKDVDFKVFSQAPVVKAIVVKGNADKYSRKNIDKLTEF 340



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  ESA       
Sbjct: 402 ALRTRIAKELDMVDNSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +   E        L  
Sbjct: 462 AKVRAVAYDIVLNGYELGGGSLRINQKELQERMF------KALGFTAEEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MNYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFP 550


>gi|150021495|ref|YP_001306849.1| aspartyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|166225440|sp|A6LNG3|SYD_THEM4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149794016|gb|ABR31464.1| aspartyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 581

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 79/194 (40%), Gaps = 10/194 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R +  L+ R+ +  + RE+  ++ F+E+++  L   +P      R F     +Q   
Sbjct: 129 RDERMQKNLIIRHKMAQAAREFLNKHDFLEVETPYLTKSTPEG---ARDFLVPSRLQ--- 182

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ +G ++ + FA  +R+ +     QPEFT ++   +    ++
Sbjct: 183 KGKFYALPQSPQLFKQILMVSGFDRYYQFARCFRDEDLRADRQPEFTQIDIEMSFVKMDE 242

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++    +  R        K+      +   + E   +  ++   R   + L    +    
Sbjct: 243 ILDLMESFARFVFGKVGIKLPE--KFDRLSYEEAMELYGSDKPDRRYGMQLQDFTNYFVN 300

Query: 192 PDRHLLYLQAQQAG 205
            +  ++    +++G
Sbjct: 301 TEFKVIKNVLERSG 314



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 65/216 (30%), Gaps = 11/216 (5%)

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
                     +     F   +   +P ++    +  +    Y N+D G+ +      +R 
Sbjct: 332 QFEEFVKQYGLGGLLWFKLDDEIVSPTAKFLKESYKKIVKEY-NLDKGSVVLLAAHENRE 390

Query: 196 LLYLQAQQAGIRVAHDDT--WSDIFSRIL--IEKIEPNLGINCCTILDRYPAPESALANI 251
           +L        ++V  +       +F  +                     +P         
Sbjct: 391 ILNTALGALRLKVGKEYFNELEKVFDALWIVDFPFLEWNEEESRFEARHHPFTMPKNLEQ 450

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              D      +++    +E+      + D   Q+  FE           E       F++
Sbjct: 451 KLEDI-KAYAYDMILNGMEIGGGSIRIHDSEVQKRVFE----IIGLTEEEANEKFGFFIS 505

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L   +P   GIA GFDR+V +     +I +VI  P
Sbjct: 506 ALKYGVPPHGGIAFGFDRMVSIAANVASIRDVIAFP 541


>gi|58581279|ref|YP_200295.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58425873|gb|AAW74910.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 614

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 78/229 (34%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 136 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 195

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 196 KATPEG---ARDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 249

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     +++R   +           V+ +  ++   +
Sbjct: 250 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMMRAIFKEV---------VDVDLAAQFPRM 300

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D        +  D   L   ++      A +D    +
Sbjct: 301 TWAEAMRRY-GSDKPDLRIALELVDVAELVKSSEFPVFTAAANDADGRV 348



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    VA       +    + E  E              PA +        A 
Sbjct: 434 ALRLKAGKEFDLVAEGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANAR 493

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 494 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 549

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 550 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 581


>gi|69247937|ref|ZP_00604553.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Enterococcus
           faecium DO]
 gi|257880301|ref|ZP_05659954.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257882156|ref|ZP_05661809.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257890960|ref|ZP_05670613.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894215|ref|ZP_05673868.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614751|ref|ZP_05712521.1| aspartyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260562395|ref|ZP_05832909.1| aspartyl-tRNA synthetase bacterial [Enterococcus faecium C68]
 gi|261209230|ref|ZP_05923622.1| aspartyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566146|ref|ZP_06446581.1| aspartyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293552797|ref|ZP_06673457.1| aspartyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|293560707|ref|ZP_06677186.1| aspartyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294614201|ref|ZP_06694121.1| aspartyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294622237|ref|ZP_06701297.1| aspartyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314938574|ref|ZP_07845858.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314940919|ref|ZP_07847825.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314952055|ref|ZP_07855078.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314991937|ref|ZP_07857392.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314995195|ref|ZP_07860309.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68194639|gb|EAN09126.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Enterococcus
           faecium DO]
 gi|257814529|gb|EEV43287.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257817814|gb|EEV45142.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257827320|gb|EEV53946.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830594|gb|EEV57201.1| aspartyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260073319|gb|EEW61660.1| aspartyl-tRNA synthetase bacterial [Enterococcus faecium C68]
 gi|260076776|gb|EEW64511.1| aspartyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162091|gb|EFD09956.1| aspartyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291592977|gb|EFF24566.1| aspartyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291598279|gb|EFF29372.1| aspartyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291603044|gb|EFF33236.1| aspartyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291605298|gb|EFF34753.1| aspartyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313590604|gb|EFR69449.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313593521|gb|EFR72366.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595845|gb|EFR74690.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313600277|gb|EFR79120.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313642131|gb|EFS06711.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0133a04]
          Length = 589

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              +    +  RN    ++R Y  +N F++I++  L + +P     ++            
Sbjct: 135 RRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETTFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +       +              +T  EA ARY   D   T  + + 
Sbjct: 249 IQTYTEGLIAKVMKEVRGIEVT---------LPFPRMTYDEAMARY-GSDKPDTRFDMEL 298

Query: 192 PD 193
            D
Sbjct: 299 ID 300



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 47/146 (32%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +      E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q    E     K+++  E +      L  L    P   
Sbjct: 475 YDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQM-EEQFG---FLLTALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DR  ML+ G +NI EVI  P
Sbjct: 531 GIALGLDRFAMLLAGEDNIREVIAFP 556


>gi|257457749|ref|ZP_05622910.1| aspartyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257444799|gb|EEV19881.1| aspartyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 599

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 76/217 (35%), Gaps = 28/217 (12%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMS-LQY 51
           QI  +   N D   + R            L+ R+ +  ++REY     F+EI++ + ++ 
Sbjct: 126 QIDEKTNANEDLRLKYRYLDLRSQTMQDHLILRSKVTFAVREYLTGKNFLEIETPTFIKS 185

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P     ++            + +      SP+   + L+ +G ++ F  A  +R+ +  
Sbjct: 186 TPEGARDYLVPSRLYPGKFYALPQ------SPQLYKQILMVSGFDRYFQIARCYRDEDAR 239

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  S + ++    ++ R   +       +              I+ 
Sbjct: 240 GDRQPEFTQIDIEMSFVSRDDVLNVTEDMFRTVFKKTIGADLAQS---------FPRISY 290

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
            +A   Y   D           D   +   A  A  +
Sbjct: 291 DDAIDLY-GTDKPDIRFEMKLQDAAWMAECADFAVFK 326



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 48/158 (30%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     +   +       +  +    L E  E     +    +   P            
Sbjct: 421 AVRSKLGKDLNLLDPKVFAFLWVIDFPLFEWNEDEQKWDPAHHMFSAPQERYLDTLEQNP 480

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                  ++L     E+ +    + +P  Q+  F        + ++K     E +     
Sbjct: 481 GEVKGDLYDLVLNGYEVASGSIRIHNPELQKRIFSIVGFNPADAEKKFGFLTEAFK---- 536

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   GIA G DR+VML+ G  +I EVI  P
Sbjct: 537 -----YGAPPHGGIAPGLDRIVMLMAGETSIKEVIAFP 569


>gi|257059692|ref|YP_003137580.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256589858|gb|ACV00745.1| aspartyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 626

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 67/182 (36%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
              R    L  R+ +  ++R Y   E QF+EI++  L   +P      R +         
Sbjct: 164 RRDRMAKNLQLRHAVVKAMRRYLEDEQQFMEIETPILTRSTPEGA---RDYLVPSRAN-- 218

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   +  S E+
Sbjct: 219 PGQWYALPQSPQLFKQLLMVAGCDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSEEE 278

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                      +T A+A  +Y   D   T    + 
Sbjct: 279 ILSLNEGLVCHIFKSVKNLDIP---------RPFPRLTYAKAMEKY-GNDRPDTRFGLEL 328

Query: 192 PD 193
            D
Sbjct: 329 VD 330



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 40/130 (30%), Gaps = 5/130 (3%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              I    +              +P       ++        + ++L    +E+      
Sbjct: 464 LLWITEFPMFEWNADEKRLEALHHPFTAPNPEDLDDLKTARAQAYDLVYNGVEVGGGSLR 523

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGA 336
           +     Q   F       +    E Y      L       P   GIA G DRLVML+ G 
Sbjct: 524 IYQKDVQEKVFATIGLSME----EAYNKFGFLLEAFEYGTPPHGGIAYGLDRLVMLLAGE 579

Query: 337 NNINEVIWTP 346
           ++I +VI  P
Sbjct: 580 DSIRDVIAFP 589


>gi|321263797|ref|XP_003196616.1| mitochondrial aspartyl-tRNA synthetase; Msd1p [Cryptococcus gattii
           WM276]
 gi|317463093|gb|ADV24829.1| Mitochondrial aspartyl-tRNA synthetase, putative; Msd1p
           [Cryptococcus gattii WM276]
          Length = 694

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 60/190 (31%), Gaps = 11/190 (5%)

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
             +R   I  G          R +  L A+                  +     E  + +
Sbjct: 482 WLSRRKKIAEGGWTHLGRLRVRLMEELVAKGLMTLPTQPHFLWITQFPLFTLADEDKIHL 541

Query: 233 NCCTIL-DRYPAPESALANIYPADPRFTK-----RFELYACNIELCNACDELLDPIEQRH 286
           +        +P       ++               ++L     E+      + D   Q  
Sbjct: 542 SRGRYSSTHHPFTAPMYEDLADLKAGKVDGVRGQHYDLVLDGQEIGGGSVRIHDVKLQEW 601

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             ++ +Q       +     +  L  L    P   G+A+GFDRLV ++ GA +I EVI  
Sbjct: 602 VMKEVLQL----DEQEMSRFDHLLRALKCGAPPHGGLALGFDRLVAILCGAKSIREVIAF 657

Query: 346 PFSQSNQEEI 355
           P S + Q+ +
Sbjct: 658 PKSTTGQDPV 667



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 67/220 (30%), Gaps = 11/220 (5%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDH 71
            RR+     L  R  +   +R Y  +  F EI++   L  SP      R F         
Sbjct: 200 LRRQDLANNLQTRGKVAHIIRNYLYDQGFTEIETPILLNSSPEG---AREFLVPTRSPSS 256

Query: 72  IRKP--LY-LQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
                  Y L  SP+   + L+ +    K +  A  +R+ +     QPEFT ++      
Sbjct: 257 EGGQPTFYALPQSPQQPKQLLISSGAIPKYYQIAKCFRDEDGRKDRQPEFTQIDLEMGFV 316

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
           S           +R    +  Q++            +       E + R    ++   + 
Sbjct: 317 SGAAEQPKGEGQMRSTWAIGGQEVREVVEGMIKKIWKEVKGVDLEGWFRVMPYEVAMDVY 376

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
             D+PD                 D++   +        +E
Sbjct: 377 GSDKPDTRFEMYTLPIGYYPTLSDNSLDKVLLDQSPYTVE 416


>gi|299140837|ref|ZP_07033975.1| aspartate--tRNA ligase [Prevotella oris C735]
 gi|298577803|gb|EFI49671.1| aspartate--tRNA ligase [Prevotella oris C735]
          Length = 585

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 67/188 (35%), Gaps = 20/188 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R +   + F+E+++  L   +P      R F     +   
Sbjct: 131 LRRNVVRKNLELRHRMTILIRNFLDSHDFMEVETPVLIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQDD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + R   +                  + + +T  EA  R+   D        + 
Sbjct: 246 VINMFEEMARHLFKEIRG----------VELPKLQQMTWHEAMKRF-GSDKPDLRFGMEF 294

Query: 192 PDRHLLYL 199
            +    + 
Sbjct: 295 VELKEAFA 302



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 6/136 (4%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
                +   +     E    +            +  L + +P   R  K ++     IE+
Sbjct: 423 KCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEQVR-AKAYDFVCNGIEV 481

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLV 330
                 + D   Q   FE     K++   E        +       P  +G+A G DR V
Sbjct: 482 GGGSLRIHDTQLQEKMFEVLGFTKERA--EAQF--GFLMNAFKYGAPPHAGLAFGLDRFV 537

Query: 331 MLVTGANNINEVIWTP 346
            +  G ++I + I  P
Sbjct: 538 SIFAGLDSIRDCIAFP 553


>gi|225026139|ref|ZP_03715331.1| hypothetical protein EUBHAL_00380 [Eubacterium hallii DSM 3353]
 gi|224956544|gb|EEG37753.1| hypothetical protein EUBHAL_00380 [Eubacterium hallii DSM 3353]
          Length = 597

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 68/191 (35%), Gaps = 21/191 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR   +  L+ R+ + +  R++     F+EI++  L   +P     ++           
Sbjct: 140 LRRPNIQKNLMMRSKVATLTRQFLANEGFLEIETPMLTRSTPEGARDYLVPSRVHPGSFY 199

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    +
Sbjct: 200 ALPQ------SPQLFKQLLMCSGYDRYFQLARCFRDEDLRADRQPEFTQIDMELSFVDVD 253

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     ++    ++   +  S            + +T  +A   Y   D      +  
Sbjct: 254 DVIDVNERLLAYLFKLCLNEEVS---------LPIQRMTWQDAM-DYYGSDKPDLRFDMK 303

Query: 191 QPDRHLLYLQA 201
             D   L    
Sbjct: 304 IQDVSELVKDC 314



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 53/161 (32%), Gaps = 15/161 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +    +  +  I    L+E  E              P  E         
Sbjct: 415 ALRLKFAEELNLLDKSEYRFVWITEFPLLEWSEEENRYTAMHHPFTMPMEEDLDMIDTEP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                K +++     E+      +     Q   FE      ++ QEK     E +     
Sbjct: 475 GKVRAKAYDIVLNGTEIGGGSVRIHQNDIQEKMFECLGISKEQAQEKFGFLLEAFK---- 530

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                  +P  +G+A G DRLVML+T  + I +VI  P  +
Sbjct: 531 -----YGVPPHAGLAYGLDRLVMLMTKEDTIRDVIAFPKVK 566


>gi|190575574|ref|YP_001973419.1| aspartyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|229559939|sp|B2FRP1|SYD_STRMK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|190013496|emb|CAQ47131.1| putative aspartyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 583

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 76/229 (33%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +  E  F +I++  L 
Sbjct: 105 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIETPILT 164

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 165 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 218

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +           V+    +    +
Sbjct: 219 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMIRAIFKEV---------VDVQLDASFPRM 269

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D        +  D   L   ++        +D    +
Sbjct: 270 TWAEAMRRY-GSDKPDLRIALELVDVAELVKDSEFPVFTGPANDAEGRV 317



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    VA       +    + E  E              PA +        A 
Sbjct: 403 ALRLKAGKDFGLVADGWAPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIADLRANAR 462

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 463 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 518

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 519 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 550


>gi|296327393|ref|ZP_06869942.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296155508|gb|EFG96276.1| aspartate--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 592

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +  S+R Y  +  F+++D+  L   +P      +    T       
Sbjct: 136 RRNKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGARDFLVPSRTNPGTFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDIEMSFVEKED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           + +  AEA  R+   D        + 
Sbjct: 250 VMNEIEGLAKYVFKNVTGEEANYT---------FQRMPYAEAMDRF-GSDKPDLRFGVEL 299

Query: 192 PD 193
            D
Sbjct: 300 KD 301



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 15/154 (9%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           I          +   +     E               A +         +   T  ++L 
Sbjct: 423 INKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTEDIRTNTYDLV 482

Query: 266 ACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
               E+      + +P  Q   F++    + + K K           FL       P   
Sbjct: 483 LNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFG--------FFLDAFKYGAPPHG 534

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
           G+A G DR +M++    +I +VI  P  ++N+ +
Sbjct: 535 GLAFGIDRWLMVMLKEESIRDVIPFP--KTNKGQ 566


>gi|19075277|ref|NP_587777.1| mitochondrial aspartate-tRNA ligase [Schizosaccharomyces pombe
           972h-]
 gi|74582821|sp|O94242|SYDM_SCHPO RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|3845470|emb|CAA19270.1| mitochondrial aspartate-tRNA ligase [Schizosaccharomyces pombe]
          Length = 611

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 85/254 (33%), Gaps = 18/254 (7%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRA 61
           Q+ ++    R    +   +L +R+ +   +  +F + +F E+++  L + +P      R 
Sbjct: 142 QLANRHIQLRA--PKYNSYLRQRSRLAYQVHSFFNDREFCEVETPLLFKSTPEG---ARE 196

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     +        Y L  SP+   + L+A+G    +  A  +R+ +     QPEFT +
Sbjct: 197 FVVPSRLN---PGKFYALPQSPQQYKQILMASGIGNYYQIARCFRDEDLRFDRQPEFTQI 253

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +       + + +  +        +                ++IT   A  +Y + 
Sbjct: 254 DLEMSFVDKPHEIMEVVEDLLVRLVSFAK--------GITLAKPFQHITYQHAIDKYGSD 305

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                 + P +    LL  Q       +   +  S   S     K+   +G N      R
Sbjct: 306 KPDIRFELPLKNITSLLPKQDPLISTEILVYNDLSHSLSNAESRKLCEAVGENVVVTSIR 365

Query: 241 YPAPESALANIYPA 254
             +         P 
Sbjct: 366 EHSQLQTWVKKLPQ 379



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 9/131 (6%)

Query: 228 PNLGINCCTILDRYPAPESALANIY--PADPRFTK--RFELYACNIELCNACDELLDPIE 283
           P    N       +P       +++     P   +   +++    IEL      + +P  
Sbjct: 456 PTEEKNQSITSTHHPFTAPHWDDVHLLEKKPLSVRGLHYDIVVNGIELGGGSIRIHNPDI 515

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           QR   +  ++  +  Y       E  +  L+   P   GIA+GFDRL  L+T A  I EV
Sbjct: 516 QRFVLKDVLKLPENRY----ATFEHLIRVLSSGCPPHGGIALGFDRLAALLTNAPGIREV 571

Query: 343 IWTPFSQSNQE 353
           I  P + S  +
Sbjct: 572 IAFPKTSSGAD 582


>gi|291561454|emb|CBL40253.1| aspartyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 598

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 72/191 (37%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ + + +R++  +  F+EI++ +L   +P     ++            
Sbjct: 141 RRPDLQRNIMIRSRVATMVRQFLADEGFLEIETPTLIKSTPEGARDYLVPSRVHPGEFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQLLKQLLMCSGMDRYFQLARCYRDEDLRADRQPEFTQIDMELSFVDVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++         K    +  N +  +    +T  EA  R+   D        + 
Sbjct: 255 VLEVNERLL---------KKLFKEICNFDVQTPILRMTWREAMDRF-GSDKPDMRFGMEL 304

Query: 192 PDRHLLYLQAQ 202
            +   +    +
Sbjct: 305 KNVSDVVKDCE 315



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 53/156 (33%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  +    D  +  +    L+E  E              P  E         
Sbjct: 415 NLRLEIARQLDLLKKDDFKFLWVTEFPLLEYSEEEGRYVAMHHPFTMPMEEDLPLIDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     EL      +     Q   FE     K++            L    
Sbjct: 475 GAVRAKAYDIVLNGTELGGGSVRIHQDDIQEKMFEVLGFTKER----AREQFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DR+VML+ GA++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRVVMLMVGADSIRDVIAFPKVK 566


>gi|55823855|ref|YP_142296.1| aspartyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|62287520|sp|Q5LXN1|SYD_STRT1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|55739840|gb|AAV63481.1| aspartyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 583

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 71/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  ++R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRMRYRYLDLRRPEMLENFKLRAKVTHTIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +      +           +   R+  +
Sbjct: 236 DLETSFLNEQEIQDITEGLIAKVMKETKGVEVTLPFPRMSYDDAMNNYGSDKPDTRFDML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T    D   +      A +   ++   D        ++   
Sbjct: 296 LQDLTELVKDIDFKVFAEAPAVKAIVVKGNADKYSRKSIDKLTDF 340



 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +SA       
Sbjct: 402 ALRNQIAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                  +++     EL      +     Q          K   ++E    ++    L  
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERML------KALGFSEESAYEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLALGLDRFVMLLAGKDNIREVIAFP 550


>gi|294626868|ref|ZP_06705460.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598882|gb|EFF43027.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 588

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 78/229 (34%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 110 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEG---ARDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +           V+ +  ++   +
Sbjct: 224 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMIRAIFKEV---------VDVDLAAQFPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  R+   D        +  D   L   +Q      A +D    +
Sbjct: 275 TWAEAMRRF-GSDKPDLRIALELVDVAELVKASQFPVFTAAANDADGRV 322



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    +A       +    + E  E              PA +        A 
Sbjct: 408 ALRLKAGKEFNLIADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANAR 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 468 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 524 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 555


>gi|256028559|ref|ZP_05442393.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766479|ref|ZP_06525857.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718034|gb|EFD82046.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 309

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +  S+R Y  +  F+++D+  L   +P      +    T       
Sbjct: 136 RRSKMLNNLKMRHRMIMSIRNYMDKAGFLDVDTPVLTKSTPEGARDFLVPSRTNPGTFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDIEMSFVEKED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           + +  AEA  R+   D        + 
Sbjct: 250 VMNEIEGLAKYVFKNVTGEEANYT---------FQRMPYAEAMDRF-GSDKPDLRFGVEL 299

Query: 192 PD 193
            D
Sbjct: 300 KD 301


>gi|281424426|ref|ZP_06255339.1| aspartate--tRNA ligase [Prevotella oris F0302]
 gi|281401695|gb|EFB32526.1| aspartate--tRNA ligase [Prevotella oris F0302]
          Length = 585

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 67/188 (35%), Gaps = 20/188 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R +   + F+E+++  L   +P      R F     +   
Sbjct: 131 LRRNVVRKNLELRHRMTILIRNFLDSHDFMEVETPVLIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQDD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + R   +                  + + +T  EA  R+   D        + 
Sbjct: 246 VINMFEEMARHLFKEIRG----------VELPKLQQMTWHEAMKRF-GSDKPDLRFGMEF 294

Query: 192 PDRHLLYL 199
            +    + 
Sbjct: 295 VELKEAFA 302



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 6/136 (4%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
                +   +     E    +            +  L + +P   R  K ++     IE+
Sbjct: 423 KCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEQVR-AKAYDFVCNGIEV 481

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLV 330
                 + D   Q   FE     K++   E        +       P  +G+A G DR V
Sbjct: 482 GGGSLRIHDTQLQEKMFEVLGFTKERA--EAQF--GFLMNAFKYGAPPHAGLAFGLDRFV 537

Query: 331 MLVTGANNINEVIWTP 346
            +  G ++I + I  P
Sbjct: 538 SIFAGLDSIRDCIAFP 553


>gi|163791444|ref|ZP_02185853.1| aspartyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873308|gb|EDP67403.1| aspartyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 589

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R+ +  S+R Y  ++ FI+ ++  L   +P     ++            
Sbjct: 135 RRPEMTQNMILRHQMTKSIRHYLDDHNFIDTETPYLTKSTPEGARDYLVPSRVHPGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    E+
Sbjct: 195 LPQ------SPQLFKQMLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETSFLEPEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +       +              +   EA +RY   D        + 
Sbjct: 249 IQSFTEELLAKVLKDTKGVELT---------LPFPRMGYDEAISRY-GSDKPDVRFGLEL 298

Query: 192 PDRHLLYL 199
            D   L  
Sbjct: 299 VDVSALVK 306



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +       +  I    L+E  +              P            
Sbjct: 408 ALRSKLGKELELIDESTYAFLWIVDWPLLEYDDEAKRYTAAHHPFTMPKESDIELLETDP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
              + + +++     EL      +     Q   F      K+    E        L  L 
Sbjct: 468 GKVYAQAYDIVLNGYELGGGSIRIHKRDLQEKMFAALGFSKE----EAEEQFGFLLEALE 523

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DR  ML+ G  NI EVI  P
Sbjct: 524 YGFPPHGGIALGLDRFAMLLAGKENIREVIAFP 556


>gi|306834555|ref|ZP_07467668.1| aspartate--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|296777685|gb|ADH43102.1| aspartyl-rRNA synthetase [uncultured bacterium MID12]
 gi|304423357|gb|EFM26510.1| aspartate--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 582

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 67/214 (31%), Gaps = 9/214 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +       R  +  S+R Y  E +FI++++  L   +P     ++            
Sbjct: 133 RRPKMLNNFKLRAKVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYLVPSRVSQGHFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT ++   +  S + 
Sbjct: 193 LPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDMETSFLSDQD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +       +      +           +   R+  +    T    D 
Sbjct: 247 IQDITEGMIAKVMKDTKGIDVTLPFPRMSYDDAMNNYGSDKPDTRFEMLLQDLTEVVKDV 306

Query: 192 PDRHLLYL-QAQQAGIRVAHDDTWSDIFSRILIE 224
             +        +   ++   D        ++   
Sbjct: 307 DFKVFSQAPVVKAIVVKGNADKYSRKNIDKLTEF 340



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  ESA       
Sbjct: 402 ALRTRIAKELDMVDNSKFNFLWVVDWPMFEWSEEEERYMSAHHPFTLPTEESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +   E        L  
Sbjct: 462 AKVRAVAYDIVLNGYELGGGSLRINQKELQERMF------KALGFTAEEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MNYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFP 550


>gi|291545651|emb|CBL18759.1| aspartyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 599

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 67/191 (35%), Gaps = 20/191 (10%)

Query: 14  FHYR-RRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQD 70
                +R  ++K + +    R++F E  F+EI++  L + +P     ++           
Sbjct: 141 RRPDLQRNIMMK-SKVAQLTRQFFTEEGFLEIETPMLGKSTPEGARDYLVPSRVHPGSFY 199

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    +
Sbjct: 200 GLPQ------SPQLYKQLLMCSGFDRYIQIARCFRDEDLRADRQPEFTQIDMELSFVDVD 253

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++      +    +            + +     + IT  EA  R+   D        +
Sbjct: 254 DVIDVNERYLAFLFKEVL---------DIDVKLPIQRITWQEAMDRF-GSDKPDMRFGME 303

Query: 191 QPDRHLLYLQA 201
             D   +    
Sbjct: 304 LHDVSDIVKDC 314



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q  +   ++  +  +    L+E  E                 E         
Sbjct: 415 ALRLELAKQMDLLDKNEYRFVWVTEFPLLEWSEEENRFTAMHHPFTMLMEEDLPLLDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K+      +      L    
Sbjct: 475 GKVRAKAYDIVLNGNEIGGGSVRIHQDDIQERMFEALGFTKEA----AHEQFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVML+  A+ I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLVMLMAKADTIRDVIAFPKVK 566


>gi|217967356|ref|YP_002352862.1| aspartyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|226736535|sp|B8E1C0|SYD_DICTD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|217336455|gb|ACK42248.1| aspartyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 592

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 75/201 (37%), Gaps = 31/201 (15%)

Query: 3   QIPSQPWWNRD----FHYRRRPFLLKRNMIQS----------SLREYFVENQFIEIDSMS 48
            +P   W N++       + R   L+R+ +QS          S+R +  +N FIEI++  
Sbjct: 109 PLPFNLWTNKEIDEIVRLKYRYLDLRRDKMQSNIIFRHNFILSIRNFLAKNGFIEIETPY 168

Query: 49  L-QYSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
           L   +P      R F     +Q       Y L  SP+   + L+ AG ++ F  A  +R+
Sbjct: 169 LIVSTPEG---ARDFIIPSRLQ---PGKFYALPQSPQLFKQILMVAGFDRYFQIARCFRD 222

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
            +     QPEFT L+   +    E +      + +   +           +N    +   
Sbjct: 223 EDLRADRQPEFTQLDMEMSFIEVEDVFTIIEELFKTVLKEV---------MNIEINTPFP 273

Query: 167 YITVAEAFARYANIDLGTTLD 187
            ++  +A   Y +       D
Sbjct: 274 RLSYEDAMNTYGSDKPDLRYD 294



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 53/161 (32%), Gaps = 15/161 (9%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A+   +       +  I    L E  E    I         P  E          
Sbjct: 407 LRLEVAELFNMEKKEGLFFLWITDFPLFEYDEEERRIVAEHHPFTSPKDEDIPLLDTNPL 466

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDF 309
               K ++L     EL +    +     Q   F       ++ ++K     E +      
Sbjct: 467 KVKAKCYDLVLNGTELGSGSIRIHKKEIQEKVFNILGITPEDAKKKFGFLLEAFE----- 521

Query: 310 LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                  P   GIA+G DR++ ++T +N++ EVI  P +QS
Sbjct: 522 ----YGAPPHGGIALGIDRIIAILTNSNSLREVIAFPKTQS 558


>gi|251798351|ref|YP_003013082.1| aspartyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247545977|gb|ACT02996.1| aspartyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 600

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 70/230 (30%), Gaps = 17/230 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   LL R+      R++     FI++++  L   +P     ++            
Sbjct: 135 RRPEMHKTLLLRSKAAKVFRDFLDGEGFIDVETPILTKSTPEGARDYLVPSRVHEGEFFA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + +Q
Sbjct: 195 LPQ------SPQIFKQLLMVGGIERYYQIARCFRDEDLRADRQPEFTQVDIETSFLTQDQ 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L+     +I                         + IT A+A  +Y +           +
Sbjct: 249 LLGMMEQLIARLFRETIGVEVE---------LPIQRITYADAMNKYGSDKPDLRFGMEIE 299

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               ++     +    VA        F+             +      RY
Sbjct: 300 DITDIVATSDVKVFASVAASGGVVKAFNAKGCGHWSRKELDDLQPFAARY 349



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 48/153 (31%), Gaps = 5/153 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +    ++E  E              P  E              + 
Sbjct: 415 RELGLIDDSKFKFVWVVDFPMLEWDEEAKRYVAVHHPFTRPKDEDLHLFDTDPGQIRAQA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     E+      +     Q   F       +    E +      L       P   
Sbjct: 475 YDIVLNGYEVGGGSMRIYKRDIQEKMFGALGFNME----EAHEKFGFLLDAFDYGTPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           GIA GFDRLVML+TG  N+ E I  P + S  +
Sbjct: 531 GIAFGFDRLVMLLTGRTNLRETIAFPKTASATD 563


>gi|55821936|ref|YP_140378.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|62287521|sp|Q5M283|SYD_STRT2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|55737921|gb|AAV61563.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 583

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 71/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  ++R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRMRYRYLDLRRPEMLENFKLRAKVTHTIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +      +           +   R+  +
Sbjct: 236 DLETSFLNEQEIQDITEGLIAKVMKETKGVEVTLPFPRMSYDDAMNNYGSDKPDTRFDML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T    D   +      A +   ++   D        ++   
Sbjct: 296 LQDLTELVKDVDFKVFAEAPAVKAIVVKGNADKYSRKSIDKLTDF 340



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +SA       
Sbjct: 402 ALRNQIAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                  +++     EL      +     Q          K   ++E    ++    L  
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERML------KALGFSEESAYEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLALGLDRFVMLLAGKDNIREVIAFP 550


>gi|313157402|gb|EFR56825.1| aspartate--tRNA ligase [Alistipes sp. HGB5]
          Length = 585

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                +  ++ R+ +   +R +     F+EI++  L   +P      R F     +    
Sbjct: 132 RRPPLQRNMILRHKMAQEIRRFLDSEGFLEIETPYLVNSTPEG---ARDFVVPSRMS--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG +K F     +R+ +     QPEFT ++   +    E +
Sbjct: 187 NQFYALPQSPQTLKQLLMVAGYDKYFQIVRCFRDEDLRADRQPEFTQIDCEMSFVEQEDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++      +   +           ++         +   EA  +Y   D        +  
Sbjct: 247 LEIFERWAKHMFKEV---------MDIELTEPLRRMPWIEAMEKY-GSDKPDLRFGMEFA 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           D   +   A+  G  V  D
Sbjct: 297 D---ITDLAKGHGFSVFDD 312



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 47/160 (29%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    AQQ G+R         I    L E  +              P  E         
Sbjct: 403 ALRLEVAQQLGLRDPKKFAPLWIVDFPLFEWDDETQRYYAMHHPFTSPKLEDVQYIDSDP 462

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                  ++      E+      + D   Q   FE      +    E        +    
Sbjct: 463 GRVRANAYDFVCNGTEIGGGSIRIHDSKLQAKMFEVLGFTAE----EAQVRFGFLMDAFK 518

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A GFDRL  L  G+++I + I  P + + ++
Sbjct: 519 FGAPPHGGLAFGFDRLCSLFGGSDSIRDYIAFPKNNAGRD 558


>gi|223039849|ref|ZP_03610133.1| aspartyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878858|gb|EEF13955.1| aspartyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 583

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 74/218 (33%), Gaps = 9/218 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
            + + +     R+    + R    +  FIE ++  L   +P     ++            
Sbjct: 132 RNEKLQNIFKMRSKAAIAARNSLDKMGFIEFETPILTRATPEGARDYLVPSRVYPGQFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 192 LPQ------SPQLFKQLLMCSGFDKYFQIAKCFRDEDLRADRQPEFTQIDIEMSFIEQED 245

Query: 132 LMKDCMNIIRCAAEVANQK-IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++    N+++             F+ ++    +E       +        D+        
Sbjct: 246 ILNMAENMLKDVFAACGYDIQIPFRRMSYKEATESYGSDKPDLRYDLKMNDVIDIFARSS 305

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                 +  + ++  I+        +IFS+  + + E 
Sbjct: 306 NEIFSKIASEPKKNRIKALKVPNGDNIFSKREMNRFEE 343



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 18/152 (11%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A+Q GI   +   +  +    +          +       +P       +    +   +
Sbjct: 412 LAEQMGIIDQNKMEFLWVLDFPMF-----EQNDDGSYSAMHHPFTMPKNIDEPDLEDILS 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT- 314
              ++     EL      +     Q+  F+     E ++++K            L  L+ 
Sbjct: 467 VAHDVVLNGYELGGGSVRIHKNDVQQKVFKLLGIDEAEQREKFG--------FLLDALSF 518

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA+GFDRL MLV   ++I +VI  P
Sbjct: 519 GAPPHGGIAIGFDRLNMLVNKTSSIRDVIAFP 550


>gi|281210595|gb|EFA84761.1| aspartyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 707

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 84/260 (32%), Gaps = 31/260 (11%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRA 61
           +   + R            +  R+ +  + R Y    QF+E+++ +L + +P        
Sbjct: 222 EVRLKHRYVDLRRPSVQSNIRLRSKVSMAARHYLTGQQFVEVETPTLFRPTPEGAR---- 277

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              E ++    +   Y L  SP+   + L+  G ++ F  A  +R+ +     QPEFT +
Sbjct: 278 ---EYLVPTRHKGQFYSLPQSPQQYKQLLMVGGLDRYFQLARCYRDEDLRADRQPEFTQI 334

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    +Q+      +I    + A   I +             + T  +   RY  I
Sbjct: 335 DMELSFVDCKQVYNIIEGLIVAMWKEAGYDIKT----------PFPHYTYRQVLDRY-GI 383

Query: 181 DLGTTLDNPDQPDRHLLYLQAQ-QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           D   T    +  D   ++   + +   ++      S       I K      +       
Sbjct: 384 DKPDTRYGLELNDITNIFSDTKVEIFRKLLDQPPSSSFTEAEHIIKCIKLPKVQPTMSSK 443

Query: 240 RYPAPESALANIYPADPRFT 259
                 +    + P  P   
Sbjct: 444 DIDTILNESKTLIPNSPGLV 463



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 12/112 (10%)

Query: 241 YPAPESAL---ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +P    AL         +      +++    +EL      + +   Q    E+ ++    
Sbjct: 572 HPDDMLALLNGEKPSDFEHIRGLHYDIVLNGVELGGGSIRIHNQETQLRVLERVLKL--- 628

Query: 298 IYNETYPIDE--DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              E + +      L  L+   P   GIA+GFDRL+ L+ G+ +I +VI  P
Sbjct: 629 ---EPHMVQRFNHLLTALSMGCPPHGGIALGFDRLMSLMVGSPSIRDVIAFP 677


>gi|314948060|ref|ZP_07851462.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|313645476|gb|EFS10056.1| aspartyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 589

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              +    +  RN    ++R Y  +N F++I++  L + +P     ++            
Sbjct: 135 RRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETTFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +       +              +T  EA ARY   D   T  + + 
Sbjct: 249 IQTYTEGLIAKVMKEVRGIEVT---------LPFPRMTYDEAMARY-GSDKPDTRFDMEL 298

Query: 192 PD 193
            D
Sbjct: 299 ID 300



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 47/146 (32%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +      E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q    E     K+++  E +      L  L    P   
Sbjct: 475 YDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQM-EEQFG---FLLTALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DR  ML+ G +NI EVI  P
Sbjct: 531 GIALGLDRFAMLLAGEDNIREVIAFP 556


>gi|124005873|ref|ZP_01690711.1| aspartyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123988556|gb|EAY28197.1| aspartyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 594

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 74/222 (33%), Gaps = 13/222 (5%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  RN I   +R +     FIE+++  L   +P      R F     + + 
Sbjct: 132 LRRNVVRQKLELRNQINREVRNFLDTQDFIEVETPVLIKSTPEG---ARDFVVPSRMNE- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E 
Sbjct: 188 -GQFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDCEMSFVTRED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +IR   +                + +   +  ++       ++     D    
Sbjct: 247 ILSTFEGLIRHLFKTVKGVDLPEVP--VMEYDDAMRLYGSDKPDTRFGMEFVELNDVAQN 304

Query: 192 PDRHLLYLQAQQAGI--RVAHDDTWSDIFSRILIEKIEPNLG 231
               +        GI  +   ++        +      P +G
Sbjct: 305 KGFKVFDDAQLVVGICAKGIAEEYSRKKIDELTNFVKRPQIG 346



 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 44/159 (27%), Gaps = 15/159 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R     +   +    L+E+ E     +        P           +
Sbjct: 405 ELRLEMGNRLGLRDPQKFSALWVVDFPLLEQDEETGKWHAMHHPFTSPKAGQEALLENDS 464

Query: 255 D--PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDED 308
                    +++    +EL      +     Q            + K +           
Sbjct: 465 QLANIKANAYDMVINGVELGGGSIRIYQRPMQEKMLSLLGFTPEEAKAQFG--------F 516

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +       P   GIA GFDR+  +  G ++I + I  P
Sbjct: 517 LMDAFEYGAPPHGGIAFGFDRICAVFGGVDSIRDFIAFP 555


>gi|260912175|ref|ZP_05918729.1| aspartate-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260633702|gb|EEX51838.1| aspartate-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 586

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 74/221 (33%), Gaps = 9/221 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +     FIE+++  L   +P      R F     +    
Sbjct: 132 RRPNVRKNLELRHKMTILIRNFLDSKDFIEVETPILIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    ++ R   +         + +        +     +   R+  ++     D     
Sbjct: 247 INLFEDMARHLFKELRGVELPAKLLQMPWHEAMKLYGSDKPDLRF-GMEFVELADVLKGT 305

Query: 193 DRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLG 231
               ++ +A+  G        D      + +      P +G
Sbjct: 306 GDFSVFNEAEYIGGICVPGCADYSRKQLNELTDFVKRPQVG 346



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 44/155 (28%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           +L      + G+R         I    +     E    +            +  L + +P
Sbjct: 406 NLRLEMGDRLGLRDKDKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDDHP 465

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLAC 312
              R    ++     IE+      + D   Q   F            E         +  
Sbjct: 466 ERVR-ALAYDFVCNGIEVGGGSLRIHDGALQEKMFGIL-----GFTPERAMAQFGFLINA 519

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P  +G+A G DR V +  G N+I + I  P
Sbjct: 520 FKYGAPPHAGLAFGLDRFVSIFAGLNSIRDCIAFP 554


>gi|323345167|ref|ZP_08085391.1| aspartate--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323094437|gb|EFZ37014.1| aspartate--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 589

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 76/223 (34%), Gaps = 9/223 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +   ++FIE+++  L   +P      R F     +    
Sbjct: 132 RRPAVRKNLELRHRMTILIRNFLDSHRFIEVETPVLIGSTPEGA---RDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQEDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    ++ R   +         +      +   +     +   R+  ++    +D     
Sbjct: 247 ISLFEDMARHLFKEIRGVNLPDKLQQMTWYDAMKRFGSDKPDIRF-GMEFVEMMDILKGS 305

Query: 193 DRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGIN 233
               ++  A+  G        D      + +      P +G  
Sbjct: 306 GEFSVFNNAEYIGGICVPGGADYSRKQLNELTDFVKRPQIGAQ 348



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 41/142 (28%), Gaps = 8/142 (5%)

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
                +    +   +     E    +            +  L   +P   R  K ++   
Sbjct: 419 DKNKFECLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLEEHPERVR-AKAYDFVC 477

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL-TEMPQSSGIAM 324
             IE+      + D   Q   F+           E         +       P  +G+A 
Sbjct: 478 NGIEVGGGSLRIHDGKLQEKMFKIL-----GFTPERAMAQFGFLINAFKYGAPPHAGLAF 532

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           G DR V ++ G ++I + I  P
Sbjct: 533 GLDRFVAIMAGLDSIRDCIAFP 554


>gi|317122077|ref|YP_004102080.1| aspartyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315592057|gb|ADU51353.1| aspartyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 615

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 62/183 (33%), Gaps = 21/183 (11%)

Query: 16  YRRRPFLL---KRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR         R+     +R YF  + F+E+++  L   +P     ++           
Sbjct: 159 LRRPEMFRNLWLRHRAYQVVRRYFDRHGFLEVETPMLTRSTPEGARDYLVPSRLYPGRFY 218

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG E+ F     +R+ +     QPEFT ++   +    +
Sbjct: 219 ALPQ------SPQLFKQLLMVAGLERYFQIVRCFRDEDLRADRQPEFTQIDVEMSFVDVD 272

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     ++            S              +T AEA ARY   D       P 
Sbjct: 273 DVLAVAEGMMAELWRELLGVEVS---------LPLPRLTYAEAMARY-GSDKPDLRYEPA 322

Query: 191 QPD 193
             D
Sbjct: 323 IAD 325



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 49/156 (31%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G     +   + I    L+E  E              P  E         
Sbjct: 436 KLRLQLAERLGWPRVREWALAWIVDFPLLEWDEEEGRYVARHHPFTSPRDEDLDRLETDP 495

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                K ++L     E+      +     Q   F       + I        E F   L 
Sbjct: 496 AGVRAKAYDLVLNGYEIGGGSIRIHRRDVQERVF-------RAIGLPPEKARERFGFLLE 548

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 P   GIA GFDR+VML  GA++I +VI  P
Sbjct: 549 AFEYGPPPHGGIAFGFDRIVMLAAGASSIRDVIAFP 584


>gi|111115273|ref|YP_709891.1| aspartyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123145714|sp|Q0SN63|SYD_BORAP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110890547|gb|ABH01715.1| aspartyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 586

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E          +   P            
Sbjct: 405 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYIPAHHMFSIPKKRYISNLEKNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           +    + ++L    +EL +    + +   Q+  F     +K+K  +        FL  L 
Sbjct: 465 NKAIGEIYDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSED----RFGFFLKALE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 521 YGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 101/299 (33%), Gaps = 17/299 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + V+ +F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHLIRNFLVKRKFLELETPTFVKSTPEG---ARDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +       S +       +        +   R+       + +  + 
Sbjct: 245 IFKLIENMLFSIFKNCLNIKLSKKFKKITYKTAMNKYGSDKPDTRFELTLQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  +   +  I+       +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 305 EFNVFKDILNNKGSIKTLIVKDKADTFSRAKINNLEEIAKLYKTQGLY-FTKIENNKFSG 363

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             A    T+  +L        N        +  E   +   +++ K         IDE+
Sbjct: 364 GIAKFLKTEEQQLIKAYSLENNDIIFFIANNKWEIACKAMGQIRIKIANDL--GLIDEN 420


>gi|328950736|ref|YP_004368071.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451060|gb|AEB11961.1| aspartyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 586

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 54/160 (33%), Gaps = 13/160 (8%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
              ++ G+       +  +    L+E  E              P                
Sbjct: 411 ELGRRLGLIPEEGFRFLWVVDFPLLEWDEEAGRWTYMHHPFTSPVEADLEYLETDPGRVR 470

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT 314
            K ++L     E+      +     QR  F+     E + ++K           FL  L 
Sbjct: 471 AKAYDLVLNGTEVGGGSIRIHRVDVQRRMFQALGIGEAEAREKFG--------FFLEALE 522

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR++ L+ GA +I EVI  P +QS ++
Sbjct: 523 YGAPPHGGIAWGLDRMLALMAGAASIREVIPFPKNQSGRD 562



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 67/190 (35%), Gaps = 16/190 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  ++ ++    +FI++++  L   +P      R F     +    
Sbjct: 140 RRKGMQDKLRLRHRVIKAIWDFLDREEFIQVETPFLTRSTPEG---ARDFLVPSRL--EP 194

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F  A  +R+ +     QP+FT L+   +    E +
Sbjct: 195 GRFYALPQSPQLFKQMLMIAGVDRYFQIARCFRDEDLRADRQPDFTQLDLEMSFVDVEDV 254

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++    ++      A               +    +   EA  RY   D        +  
Sbjct: 255 LELNERLVAHVFREALGVEVP---------TPFPRLAYREAMNRY-GSDKPEIGFGLELV 304

Query: 193 DRHLLYLQAQ 202
           D    +  ++
Sbjct: 305 DATEAFRASE 314


>gi|327355477|gb|EGE84334.1| asparaginyl-tRNA synthetase Slm5 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 563

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 66/416 (15%), Positives = 110/416 (26%), Gaps = 80/416 (19%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS 52
           + QIP         H R R          R+     L + F       F+++    +  S
Sbjct: 152 LRQIP---------HLRLRTPFNSLLSRFRSECIFQLGQVFHSRLGSNFVQVQPPLITSS 202

Query: 53  ---PGNETHIRAF---STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
                 E    A      +    +  R P YL  S +   +   AA    ++  +  +R 
Sbjct: 203 DCEGAGEVFTVAPGDKVGDGEKGEFFRSPKYLTVSSQLHLEAY-AAELGNVWTLSPTFRA 261

Query: 107 GEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNI-IRCAAEVANQKIFSFQNVNCNPFSE 164
            +     H  EF MLE           + D +   IR   +   +   + +        E
Sbjct: 262 EKSDTPRHLSEFYMLEVEMNFVHSLDSLTDTVESLIRDLTKRLYESPVAEEIFTAKRTGE 321

Query: 165 P--EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
              E +           I+ G            LL                W +      
Sbjct: 322 SGQENVDQGLRPRWLGIIESGEWPRITYTNAIELLQKAVASKAATFTITPAWEEGLHLEH 381

Query: 223 IEKIEPNLGINCCTILDRYPAPESALAN--------IYPADPRF------TKRFELYACN 268
            + I   +G  C   +  YP                  PA P         +  E  AC 
Sbjct: 382 EKFIVDEVGKGCPVFVTHYPKMVKPFYMAPSIVLEEPSPASPAELSNHDPAQTMETVACF 441

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYN-----ETYPIDED--------------- 308
             L     E++    + HR    +Q  ++        E  P D D               
Sbjct: 442 DLLMPEICEVVGGSIREHRLPNLIQNMREHGLIRKMPEAGP-DADCASSSSHLAAEQGSS 500

Query: 309 ---FLACLT--------------EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +L                        G  +GFDR +  + G +++ +V+  P 
Sbjct: 501 IYPYLQPDEYIGPMQWYADLRRWGSAPHGGFGLGFDRYLGYLAGVSSLRDVVPFPR 556


>gi|239608737|gb|EEQ85724.1| asparaginyl-tRNA synthetase Slm5 [Ajellomyces dermatitidis ER-3]
          Length = 557

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 66/416 (15%), Positives = 110/416 (26%), Gaps = 80/416 (19%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS 52
           + QIP         H R R          R+     L + F       F+++    +  S
Sbjct: 146 LRQIP---------HLRLRTPFNSLLSRFRSECIFQLGQVFHSRLGSNFVQVQPPLITSS 196

Query: 53  ---PGNETHIRAF---STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
                 E    A      +    +  R P YL  S +   +   AA    ++  +  +R 
Sbjct: 197 DCEGAGEVFTVAPGDKVGDGEKGEFFRSPKYLTVSSQLHLEAY-AAELGNVWTLSPTFRA 255

Query: 107 GEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNI-IRCAAEVANQKIFSFQNVNCNPFSE 164
            +     H  EF MLE           + D +   IR   +   +   + +        E
Sbjct: 256 EKSDTPRHLSEFYMLEVEMNFVHSLDSLTDTVESLIRDLTKRLYESPVAEEIFTAKRTGE 315

Query: 165 P--EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
              E +           I+ G            LL                W +      
Sbjct: 316 SGQENVDQGLRPRWLGIIESGEWPRITYTNAIELLQKAVASKAATFTITPAWEEGLHLEH 375

Query: 223 IEKIEPNLGINCCTILDRYPAPESALAN--------IYPADPRF------TKRFELYACN 268
            + I   +G  C   +  YP                  PA P         +  E  AC 
Sbjct: 376 EKFIVDEVGKGCPVFVTHYPKMVKPFYMAPSIVLEEPSPASPAELSNHDPAQTMETVACF 435

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYN-----ETYPIDED--------------- 308
             L     E++    + HR    +Q  ++        E  P D D               
Sbjct: 436 DLLMPEICEVVGGSIREHRLPNLIQNMREHGLIRKMPEAGP-DADCASSSSHLAAEQGSS 494

Query: 309 ---FLACLT--------------EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +L                        G  +GFDR +  + G +++ +V+  P 
Sbjct: 495 IYPYLQPDEYIGPMQWYADLRRWGSAPHGGFGLGFDRYLGYLAGVSSLRDVVPFPR 550


>gi|153854668|ref|ZP_01995918.1| hypothetical protein DORLON_01916 [Dorea longicatena DSM 13814]
 gi|149752772|gb|EDM62703.1| hypothetical protein DORLON_01916 [Dorea longicatena DSM 13814]
          Length = 603

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 69/191 (36%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ + +  R++  E  F+EI++  L   +P     ++     +      
Sbjct: 141 RRPDLQRNLMMRSKVATLTRQFLAEEGFLEIETPVLIKSTPEGARDYLVPSRIQQGQFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMCSGYDRYFQIAKCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +       S            + +T  EA  R+   D        + 
Sbjct: 255 VIEVNERLLAKLFKEVLGVEVS---------LPIQRMTWQEAMDRF-GSDKPDIRFGMEL 304

Query: 192 PDRHLLYLQAQ 202
            +   +    +
Sbjct: 305 TNVTDVVKDCE 315



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 7/157 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q  +   ++  +  +    L+E  E              P  E         
Sbjct: 415 ALRLELARQMELLDKNEYKFLWVTEFPLLEWSEEQNRYTAMHHPFTMPMEEDLQYIDSDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                K +++     E+      + D   Q   FE           E         L   
Sbjct: 475 GRVRAKAYDIVLNGNEIGGGSVRIFDQDIQSKMFEVL-----GFTEEQAQEQFGFLLTAF 529

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 530 KYGVPPHAGLAYGLDRLVMLMAKQDSIRDVIAFPKVK 566


>gi|319746001|gb|EFV98283.1| aspartate--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 583

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 71/233 (30%), Gaps = 37/233 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y    +FI++++  L   +P     ++ 
Sbjct: 122 DTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A   Y + 
Sbjct: 236 DLETSFLSDQEIQDIVEGMIAKVMKDTKGLEVS---------LPFPRMAYDDAMNNYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLYL----------QAQQAGIRVAHDDTWSDIFSRILI 223
              T  D   Q    ++              +   ++   D        ++  
Sbjct: 287 KPDTRFDMLLQDLTEIVKEVDFKVFSEASVVKAIVVKDKADKYSRKNIDKLTE 339



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 45/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  E+        
Sbjct: 402 ALRTRIAKELELIDYSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTAETVHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +            L  
Sbjct: 462 AKVRAVAYDIVLNGYELGGGSLRINQKDTQERMF------KALGFSAESAQEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|116628635|ref|YP_821254.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122266771|sp|Q03IB4|SYD_STRTD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116101912|gb|ABJ67058.1| aspartyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312279286|gb|ADQ63943.1| Aspartyl-tRNA synthetase, putative [Streptococcus thermophilus
           ND03]
          Length = 583

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 71/225 (31%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  ++R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRMRYRYLDLRRPEMLENFKLRAKVTHTIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +      +           +   R+  +
Sbjct: 236 DLETSFLNEQEIQDITEGLIAKVMKETKGVEVTLPFPRMSYDDAMNNYGSDKPDTRFDML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T    D   +      A +   ++   D        ++   
Sbjct: 296 LQDLTELVKDVDFKVFAEAPAVKAIVVKGNADKYSRKSIDKLTDF 340



 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +SA       
Sbjct: 402 ALRNQIAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                  +++     EL      +     Q          K   ++E    ++    L  
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERML------KALGFSEESAYEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLALGLDRFVMLLAGKDNIREVIAFP 550


>gi|329945595|ref|ZP_08293328.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328528598|gb|EGF55563.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 559

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 68/198 (34%), Gaps = 27/198 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R+ +  + R     + F+EI++ +L   +P      R 
Sbjct: 87  EARLRYRYLDLRRSSMQYAIRLRSKVSQAARRVLDSHDFVEIETPTLTRSTPEG---ARD 143

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+
Sbjct: 144 FLVPARL--TPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLD 201

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + ++    +++R    +    + +              +T  +A  RY   D
Sbjct: 202 VEMSFVEQDDVIAVAEDVLREVWALIGYDLPT----------PIPRMTYRDAMERY-GSD 250

Query: 182 LGTTLDNPDQPDRHLLYL 199
                   +  D    + 
Sbjct: 251 KPDLRFGCELVDLTDHFK 268



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P+    + +  DP       +++     E+      +     Q   F          
Sbjct: 420 FTSPKPECLDTFDTDPGNALAYAYDIVCNGNEIGGGSIRIHRSDVQERVFNVMGI----G 475

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G+DR+V L+T A++I +VI  P
Sbjct: 476 EQEAQEKFGFLLDAFKFGAPPHGGIAFGWDRIVSLLTRADSIRDVIAFP 524


>gi|294665399|ref|ZP_06730687.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604810|gb|EFF48173.1| aspartyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 588

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 78/229 (34%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 110 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +           V+ +  ++   +
Sbjct: 224 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMIRAIFKEV---------VDVDLAAQFPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  R+   D        +  D   L   +Q      A +D    +
Sbjct: 275 TWAEAMRRF-GSDKPDLRIALELVDVAELVKASQFPVFTAAANDADGRV 322



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    +A       +    + E  E              PA +        A 
Sbjct: 408 ALRLKAGKEFNLIADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANAR 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 468 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 524 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 555


>gi|81428474|ref|YP_395474.1| aspartyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|97196706|sp|Q38XB6|SYD_LACSS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78610116|emb|CAI55165.1| Aspartyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 590

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 70/188 (37%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +++R+ I  +  +Y   N F+ I++  L   +P     ++            
Sbjct: 134 RRPEMQQAIIRRSQITQAAHKYLDNNGFLNIETPDLTRSTPEGARDYLVPSRVYPGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 194 LPQ------SPQVFKQLLMDAGFDRYYQMARCFRDEDLRGDRQPEFTQIDVETSFMSAEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    II         K      ++ +  +  + +   EA  RY   D      + + 
Sbjct: 248 IQEQAEGII---------KQVMQDVMHIDVPTPFKRMKWQEAMDRY-GSDKPDIRFDLEI 297

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 298 QDLTEMMK 305



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 44/150 (29%), Gaps = 11/150 (7%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A   G+       +  +    L E  E              P                 +
Sbjct: 413 AHDMGLVDESQFAYLWVVDWPLFEYDEGFGRWIAAHHPFTRPNDSDVDLLETDPHKAHAQ 472

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEM 316
            +++     EL      +     Q   F       K +       +E F   L+ +    
Sbjct: 473 SYDIILNGYELGGGSLRIYQRDIQERMF-------KALGISPETYEEQFGHLLSAMDYGF 525

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G A+G DR  ML+ G +NI +VI  P
Sbjct: 526 PPHGGFAIGLDRFAMLLAGRDNIRDVIAFP 555


>gi|327467319|gb|EGF12819.1| aspartate--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 584

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 39/235 (16%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y  E +F+++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDELEFLDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRIHQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A A Y  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIEVS---------LPFPRMKYDDAMALY-GV 285

Query: 181 DLGTTLDNPDQPDRHLLYL-----------QAQQAGIRVAHDDTWSDIFSRILIE 224
           D   T       D   L               +   ++ A D        ++  +
Sbjct: 286 DKPDTRFEMLLQDLTDLVKGVDFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 46/156 (29%), Gaps = 11/156 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +S        
Sbjct: 402 ALRVRLAKELDLIDPDTFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQKDSEQELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                  +++     EL      +     Q   F       K +        E F   L 
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINQKDLQERMF-------KALGFSAQEAAEQFGFLLE 514

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 515 AMDYGFPPHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|291287345|ref|YP_003504161.1| aspartyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884505|gb|ADD68205.1| aspartyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 596

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 69/210 (32%), Gaps = 20/210 (9%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RRR     L+ R+ I  ++REY     F++I++  L   +P     ++           
Sbjct: 140 LRRRKIQNNLITRHNIVRTMREYLYARDFLDIETPFLTKSTPEGARDYLVPSRVNPGKCY 199

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+  G +K F     +R+ +     QPEFT L+   +    E
Sbjct: 200 ALPQ------SPQMFKQLLMVGGYDKYFQIVKCFRDEDLRADRQPEFTQLDMEMSFIDRE 253

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            LM+    +     +                      ++   A  +Y +    T  D   
Sbjct: 254 DLMELLEGMFIEIFQNIKGIKLERG---------FPRMSYDNAMEKYGHDAPDTRFDMFL 304

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
           +    L+     +    V  D       + 
Sbjct: 305 KTINELVADCGFKVFREVVADGGVVKAINA 334



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 7/161 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     ++ G+    D ++  +    L++                 P  E         
Sbjct: 414 KVRLKLGKELGLIKEGDYSFVWVLDFPLLDYDAEEKRYVAMHHPFTAPLDEDIPLFDTDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI-DEDFLACL 313
                K ++L     E+      +     Q   F            E        F+  L
Sbjct: 474 GQMRAKAYDLVLNGSEIGGGSIRIHRSDVQEKMFNAL-----GFTPEEREYKFGFFIDAL 528

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   GIA G DR+  ++TG+++I +VI  P +Q   +
Sbjct: 529 KYGTPPHGGIAFGVDRIATILTGSDSIRDVIAFPKTQKATD 569


>gi|312862480|ref|ZP_07722723.1| aspartate--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322515838|ref|ZP_08068782.1| aspartate--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311102123|gb|EFQ60323.1| aspartate--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322125724|gb|EFX97046.1| aspartate--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 583

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 67/198 (33%), Gaps = 27/198 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  ++R Y  + +FI++++  L   +P     ++ 
Sbjct: 122 DTRMRYRYLDLRRPEMLENFKLRAKVTHAIRNYLDDLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +              ++  +A   Y + 
Sbjct: 236 DLETSFLNEQEIQDITEGLIAKVMKETKGIEVT---------LPFPRMSYDDAMNNYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLY 198
              T  D   Q    ++ 
Sbjct: 287 KPDTRFDMLLQDLTEVVK 304



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  +SA       
Sbjct: 402 ALRNQIAKELDMIDNTKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                  +++     EL      +     Q          K   ++E    ++    L  
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINHKDLQERML------KALGFSEESAYEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|216263666|ref|ZP_03435661.1| aspartyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980510|gb|EEC21331.1| aspartyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 586

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E          +   P            
Sbjct: 405 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYIPAHHMFSIPKKRYISNLEKNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           +    + ++L    +EL +    + +   Q+  F     +K+K  +        FL  L 
Sbjct: 465 NKAIGEIYDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSED----RFGFFLKALE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 521 YGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 99/299 (33%), Gaps = 17/299 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + V+ +F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHLIRNFLVKRKFLELETPTFVKSTPEG---ARDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +                +   R+       + +  + 
Sbjct: 245 IFKLIENMLFSIFKNCLNIKLPKKFKKITYKMAMNKYGSDKPDTRFELTLQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                  +   +  I+       +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 305 EFNVFKDILNNKGSIKTLIVKDKADTFSRAKINNLEEIAKLYKTQGLY-FTKIENNKFSG 363

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             A    T+  +L        N        +  E   +   +++ K         IDE+
Sbjct: 364 GIAKFLKTEEQQLIKAYSLENNDIIFFIANNKWEIACKAMGQIRIKIANDL--GLIDEN 420


>gi|187476630|ref|YP_784653.1| aspartyl-tRNA synthetase [Bordetella avium 197N]
 gi|97196548|sp|Q2L1K6|SYD_BORA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|115421216|emb|CAJ47721.1| aspartyl-tRNA synthetase [Bordetella avium 197N]
          Length = 596

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 59/191 (30%), Gaps = 8/191 (4%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHL--LYLQAQQAGIRVAHDDTWSDIFSRILI 223
           +     +    +   D    +++     R         ++ G+  +       +    + 
Sbjct: 384 KRTGAQDGDIIFFGADRAKVVNDALGALRVKIGHSEFGKKTGL-FSGGWRPLWVVDFPMF 442

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E              P               F K +++     E+      +     
Sbjct: 443 EYDEEEGRYTAAHHPFTSPKDGHEDFLETDPSQAFAKAYDMVLNGWEIGGGSVRIHREEV 502

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q   F    +  K   +E        L  L    P   GIA G DR+V ++TGA++I +V
Sbjct: 503 QSKVF----RALKIGPDEAREKFGFLLDALQYGAPPHGGIAFGLDRIVTMMTGADSIRDV 558

Query: 343 IWTPFSQSNQE 353
           I  P +Q  Q+
Sbjct: 559 IAFPKTQRAQD 569



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 72/184 (39%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R  +   +R++  +  FI+I++  L   +P     ++            
Sbjct: 131 RRPQMQRNLMLRYRVSIEVRKFLDQLGFIDIETPMLTKSTPEGARDYLVPSRVNAGHFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLTETE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +     ++IR   +V           N +       +T  EA AR+ +   D+   L+  
Sbjct: 245 IRAVFESMIRHVFKVV---------QNVDLPDPFPIMTWTEAMARFGSDKPDMRVNLEFT 295

Query: 190 DQPD 193
           D  D
Sbjct: 296 DVAD 299


>gi|77405125|ref|ZP_00782224.1| aspartyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77410832|ref|ZP_00787189.1| aspartyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77163050|gb|EAO74004.1| aspartyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77176268|gb|EAO79038.1| aspartyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 583

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 71/233 (30%), Gaps = 37/233 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y    +FI++++  L   +P     ++ 
Sbjct: 122 DTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A   Y + 
Sbjct: 236 DLETSFLSDQEIQDIVEGMIAKVMKDTKGLEVS---------LPFPRMAYDDAMNNYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLYL----------QAQQAGIRVAHDDTWSDIFSRILI 223
              T  D   Q    ++              +   ++   D        ++  
Sbjct: 287 KPDTRFDMLLQDLTEVVKEVDFKVFSEASVVKAIVVKNKADKYSRKNIDKLTE 339



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 46/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  I    + E  E              P  E+A       
Sbjct: 402 ALRTRIAKELELIDYSKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +            L  
Sbjct: 462 AKVRAVAYDIVLNGYELGGGSLRINQKDTQERMF------KALGFSAESAQEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|261879647|ref|ZP_06006074.1| aspartate-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270333664|gb|EFA44450.1| aspartate-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 585

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 66/187 (35%), Gaps = 17/187 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +  ++QF+E+++  L   +P      R F     +    
Sbjct: 132 RREAVRKNLELRHRMTILIRNFLDKHQFMEVETPILIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVGGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + R   +                  + E +T  EA  RY   D        +  
Sbjct: 247 IDLFEEMARHLFKEIRG----------VELPKLEQMTWHEAMKRY-GSDKPDLRFGMEFV 295

Query: 193 DRHLLYL 199
           +    + 
Sbjct: 296 ELKDAFA 302



 Score = 81.6 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 39/125 (31%), Gaps = 11/125 (8%)

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPR----FTKRFELYACNIELCNACDELLDPIE 283
                    +   +P       +I   D        K ++     IE+      + D   
Sbjct: 434 EWSDEEQRLMATHHPFTMPNPDDISLLDEHPEQVRAKAYDFVCNGIEVGGGSIRIHDTQL 493

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFL-ACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
           Q   FE           E+      FL        P  +G+A G DR V ++ G ++I +
Sbjct: 494 QEKMFEVL-----GFTPESAEAQFGFLMNAFKYGAPPHAGLAFGLDRFVSIMAGLDSIRD 548

Query: 342 VIWTP 346
            +  P
Sbjct: 549 CMAFP 553


>gi|19703644|ref|NP_603206.1| aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|24212405|sp|Q8RGJ4|SYD_FUSNN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|19713758|gb|AAL94505.1| Aspartyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 592

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +  S+R Y     F+++D+  L   +P      +    T       
Sbjct: 136 RRNKMLNNLKMRHRMIMSIRNYMDNAGFLDVDTPVLTKSTPEGARDFLVPSRTNPGTFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 196 LPQ------SPQLFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDIEMSFVEKED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           + +  AEA  R+   D        + 
Sbjct: 250 VMNEIEGLAKYVFKNVTGEEANYI---------FQRMPYAEAMDRF-GSDKPDLRFGVEL 299

Query: 192 PD 193
            D
Sbjct: 300 KD 301



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 15/154 (9%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           I          +   +     E               A +         +   T  ++L 
Sbjct: 423 INKDDFKFLWVVDFPMFDYDEEEQRYKAEHHPFTSIKAEDLDKFLAGQTEDIRTNTYDLV 482

Query: 266 ACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
               E+      + +P  Q   F++    + + K K           FL       P   
Sbjct: 483 LNGSEIGGGSIRIFNPQIQSMVFDRLGLSQEEAKAKFG--------FFLDAFKYGAPPHG 534

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
           G+A G DR +M++    +I +VI  P  ++N+ +
Sbjct: 535 GLAFGIDRWLMVMLKEESIRDVIPFP--KTNKGQ 566


>gi|315426949|dbj|BAJ48568.1| asparaginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
 gi|315426968|dbj|BAJ48586.1| asparaginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 347

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 95/340 (27%), Gaps = 45/340 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
              R R  L  +     ++R +   + F+E+    +   P  +  IR    + +  D+  
Sbjct: 38  RTPRMRLILRVQAEANRAVRSWLDSHGFLELLPPIIG--PVTDPGIR--GAKQVTIDYYG 93

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ----GCLHQPEFTMLEWYRAHESY 129
           +   + +S     + L  A  +KI+ F+   R           H  EF  ++   A   Y
Sbjct: 94  REYKVMSSAILYKQMLATA-FDKIYFFSPNIRLEPLESATTGRHLVEFVQIDIEEADVDY 152

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              M    N++        +                     A          L       
Sbjct: 153 RAAMSTAENLLAYVVNTVAET--------------------ARQELEQLGRKLPRFKTPF 192

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
            +          +  G +V  +          L + I      N    +  YP       
Sbjct: 193 RKITHAEAIEILRAHGEQVQPNAEIPWPQEEKLSKII------NEPFFITDYPKGARGFY 246

Query: 250 NI-YPADPRFTKRFELYACNIELCNACDELLDPIEQR-HRFEKEMQEKKKIYNETYPIDE 307
           +   P  P   K F+L            E     E+     +   + K+   N       
Sbjct: 247 DKEDPQRPGILKDFDLM-----YPEGYGEAASGAEREYEYSKVLERLKQSGENPAKY--G 299

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +L  L   +  +SG  +G +RL   + G   + E    P
Sbjct: 300 WYLDMLREGIRPTSGFGIGVERLTRYLCGLQAVWEARPYP 339


>gi|289167031|ref|YP_003445298.1| aspartyl-tRNA synthetase (aspartate-tRNA ligase) [Streptococcus
           mitis B6]
 gi|288906596|emb|CBJ21429.1| aspartyl-tRNA synthetase (aspartate-tRNA ligase) [Streptococcus
           mitis B6]
          Length = 587

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 45/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+             
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETTHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 76/233 (32%), Gaps = 37/233 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +              +   +A A Y + 
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVT---------LPFPRMKYDDAMALYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLYL----------QAQQAGIRVAHDDTWSDIFSRILI 223
              T  D   Q    ++              +   ++ A D+       ++  
Sbjct: 287 KPDTRFDMLLQNLTEVVKCVDFKVFSEVPAVKAIVVKGAADNYSRKDIDKMTE 339


>gi|257469474|ref|ZP_05633566.1| aspartyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317063718|ref|ZP_07928203.1| aspartyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313689394|gb|EFS26229.1| aspartyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 595

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 74/218 (33%), Gaps = 8/218 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    L  R+ +  ++R Y  +  F++ID+  L   +P      R F     I    
Sbjct: 135 RRSRMLHNLKMRHKMIMAIRNYMDKEGFLDIDTPLLTKSTPEG---ARDFLVPCRIS--- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G E+ F  A  +R+ +     Q EF  L+   +  + E 
Sbjct: 189 PGDFYALPQSPQLFKQLLMIGGIERYFQLAKCFRDEDLRADRQFEFVQLDIEMSFVTMED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    + +        +  ++                 +   R+       T    + 
Sbjct: 249 VMRTIEGLAKDVFTAITGEEVNYTFQKMPYAEAMSRFGSDKPDIRFGVELKDLTEIVRNS 308

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             +      A    ++       ++ FSR +I + E +
Sbjct: 309 GFKAFQETVANGGIVKAVVAPQGAERFSRKIIGEYEEH 346



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 42/139 (30%), Gaps = 15/139 (10%)

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD-----PRFTKR-----FELYACN 268
                  +             RY A      +I   D        T+      +++    
Sbjct: 425 DEFKFLWVVDFPMFQYDEEEKRYKAEHHPFTSIKDEDLNAFLNGQTENIRTNTYDMVLNG 484

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFD 327
            E+      + +P  Q   F++          E       FL       P   G+A G D
Sbjct: 485 FEIGGGSIRIFNPEIQSKVFDRLGLT----PEEAKTKFGFFLDAFKYGAPPHGGLAFGLD 540

Query: 328 RLVMLVTGANNINEVIWTP 346
           R +M++   N+I +VI  P
Sbjct: 541 RWLMVMLKENSIRDVIPFP 559


>gi|25012098|ref|NP_736493.1| aspartyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77408131|ref|ZP_00784877.1| aspartyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|46577262|sp|Q8E2Q7|SYD_STRA3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24413642|emb|CAD47719.1| aspartyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77173231|gb|EAO76354.1| aspartyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 583

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 71/233 (30%), Gaps = 37/233 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y    +FI++++  L   +P     ++ 
Sbjct: 122 DTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A   Y + 
Sbjct: 236 DLETSFLSDQEIQDIVEGMIAKVMKDTKGLEVS---------LPFPRMAYDDAMNNYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLYL----------QAQQAGIRVAHDDTWSDIFSRILI 223
              T  D   Q    ++              +   ++   D        ++  
Sbjct: 287 KPDTRFDMLLQDLTEIVKEVDFKVFSEASVVKAIVVKDKADKYSRKNIDKLTE 339



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 46/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  E+A       
Sbjct: 402 ALRTRIAKELELIDYSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +            L  
Sbjct: 462 AKVRAVAYDIVLNGYELGGGSLRINQKDTQERMF------KALGFSAESAQEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|261204059|ref|XP_002629243.1| asparaginyl-tRNA synthetase Slm5 [Ajellomyces dermatitidis
           SLH14081]
 gi|239587028|gb|EEQ69671.1| asparaginyl-tRNA synthetase Slm5 [Ajellomyces dermatitidis
           SLH14081]
          Length = 557

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 65/416 (15%), Positives = 110/416 (26%), Gaps = 80/416 (19%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFVEN---QFIEIDSMSLQYS 52
           + QIP         H R R          R+     L + F       F+++    +  S
Sbjct: 146 LRQIP---------HLRLRTPFNSLLSRFRSECIFQLGQVFHSRLGSNFVQVQPPLITSS 196

Query: 53  ---PGNETHIRAF---STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
                 E    A      +    +  R P YL  S +   +   AA    ++  +  +R 
Sbjct: 197 DCEGAGEVFTVAPGDKVGDGEKGEFFRSPKYLTVSSQLHLEAY-AAELGNVWTLSPTFRA 255

Query: 107 GEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNI-IRCAAEVANQKIFSFQNVNCNPFSE 164
            +     H  EF MLE           + D +   IR   +   +   + +        E
Sbjct: 256 EKSDTPRHLSEFYMLEVEMNFVHSLDSLTDTVESLIRDLTKRLYESPVAEEIFTAKRTGE 315

Query: 165 P--EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
              E +           ++ G            LL                W +      
Sbjct: 316 SGQENVDQGLRPRWLGIVESGKWPRITYTNAIELLQKAVASKAATFTITPAWEEGLHLEH 375

Query: 223 IEKIEPNLGINCCTILDRYPAPESALAN--------IYPADPRF------TKRFELYACN 268
            + I   +G  C   +  YP                  PA P         +  E  AC 
Sbjct: 376 EKFIVDEVGKGCPVFVTHYPKMVKPFYMAPSIVLEEPSPASPAELSNHDPAQTMETVACF 435

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYN-----ETYPIDED--------------- 308
             L     E++    + HR    +Q  ++        E  P D D               
Sbjct: 436 DLLMPEICEVVGGSIREHRLPNLIQNMREHGLIRKMPEAGP-DADCASSSSHLAAEQGSS 494

Query: 309 ---FLACLT--------------EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +L                        G  +GFDR +  + G +++ +V+  P 
Sbjct: 495 IYPYLQPDEYIGPMQWYADLRRWGSAPHGGFGLGFDRYLGYLAGVSSLRDVVPFPR 550


>gi|309388966|gb|ADO76846.1| aspartyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 591

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 69/188 (36%), Gaps = 19/188 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  +  R+ +  + R+Y  +N F EI++  L   SP     ++            
Sbjct: 141 RRPKMKKIIGLRHQVTKTTRDYLDQNGFWEIETPILTKSSPEGARDYLVPSRVNPGEFFA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ F  A  +R+ +     QPEFT ++   +      
Sbjct: 201 LPQ------SPQIFKQLLMVSGMERYFQIARCFRDEDLRANRQPEFTQIDMEMSFV---- 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                   +    E   +++FS   +     ++ E +T  EA  R+   D        + 
Sbjct: 251 ----KQEEVMEITEGLMKELFSIGEIEVP--NKIERMTYEEAINRF-GSDKPDLRFGMEL 303

Query: 192 PDRHLLYL 199
            D   L  
Sbjct: 304 KDLSELVK 311



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A++ G+  A    +  I    L E  E    +         P  E         
Sbjct: 413 NLRLKIAKENGLIPAEVYKFVWIIDFPLFEYDENEDRLTAIHHPFTAPNEEDVNKLDSDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ-EKKKIYNETYPIDEDFLACL 313
               +K ++L     EL      + +   Q   F      +K++     Y      L   
Sbjct: 473 TSVRSKAYDLVLNGEELGGGSIRINNNKLQEKVFSALNISQKEQEDKFGY-----LLEAF 527

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA G DRL+M+++  ++I +VI  P
Sbjct: 528 DYGTPPHGGIAFGLDRLMMIISRTSSIRDVIAFP 561


>gi|295094219|emb|CBK83310.1| aspartyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 610

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 66/191 (34%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ ++ + +  R++  +  F+EI++  L   +P     ++            
Sbjct: 141 RRPDLQRNLIMKSKVATIARQFMADEGFLEIETPMLTKSTPEGARDYLVPSRVHPGTFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMCSGYDRYFQIARCFRDEDLRADRQPEFTQMDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                    + +T  EA  R+   D        + 
Sbjct: 255 VIDVNERLLAKLFKEILDLDIQ---------LPIQRMTWQEAMDRF-GSDKPDLRFGLEL 304

Query: 192 PDRHLLYLQAQ 202
            D   +    +
Sbjct: 305 KDVSDVVKDCE 315



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+  G+   +   +  I    L+E  +              P  E         
Sbjct: 415 ALRCHLAELMGLVDKNVYRFVWITEFPLLEWSDEENRFTAMHHPFTMPMEEDLQYIDSDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K +     +      L    
Sbjct: 475 GRVRAKAYDIVLNGNEIGGGSVRIHQDDIQEKMFECLGFTKAQ----AHERFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLVMLMAKQDSIRDVIAFPKVK 566


>gi|291086850|ref|ZP_06344631.2| aspartate--tRNA ligase [Clostridium sp. M62/1]
 gi|291077143|gb|EFE14507.1| aspartate--tRNA ligase [Clostridium sp. M62/1]
          Length = 625

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 67/191 (35%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ + +  R +  E  F+EI++ +L   +P     ++            
Sbjct: 165 RRPDLQKNLMTRSRVTTLTRAFLAEEGFLEIETPTLIKSTPEGARDYLVPSRVHPGSFYA 224

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 225 LPQ------SPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQPEFTQIDMELSFVDVDD 278

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++         K    +    +     + +T  EA  R+   D        + 
Sbjct: 279 VLDVNERLL---------KKLFKEICGFDLQLPIQRMTWREAMDRF-GSDKPDLRFGMEL 328

Query: 192 PDRHLLYLQAQ 202
            +        Q
Sbjct: 329 KNVSETVKDCQ 339



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  +    D  +  +    L+E  E              P  E         
Sbjct: 439 NLRLELARQLDLLKKDDFKFLWVTEFPLLEYSEEQGRFVAMHHPFTMPMEEDLALIDTDP 498

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K++            L    
Sbjct: 499 GAVRAKAYDIVLNGTEMGGGSVRIHQSDIQSKMFEVLGFTKEQ----ANEQFGFLLEAFK 554

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DR+VML+ GA++I +VI  P  +
Sbjct: 555 YGVPPHAGLAYGLDRMVMLMVGADSIRDVIAFPKVK 590


>gi|21243880|ref|NP_643462.1| aspartyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|24212401|sp|Q8PHU5|SYD_XANAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21109482|gb|AAM37998.1| aspartyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 588

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 78/229 (34%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 110 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +           V+ +  ++   +
Sbjct: 224 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMIRAIFKEV---------VDVDLAAQFPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  R+   D        +  D   L   +Q      A +D    +
Sbjct: 275 TWAEAMRRF-GSDKPDLRIALELVDVAELVKASQFPVFTAAANDADGRV 322



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    +A       +    + E  E              PA +        A 
Sbjct: 408 ALRLKAGKEFDLIADGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANAR 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 468 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 524 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 555


>gi|303237382|ref|ZP_07323952.1| aspartate--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302482769|gb|EFL45794.1| aspartate--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 586

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 73/220 (33%), Gaps = 7/220 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +     FIE+++  L   +P      R F     +    
Sbjct: 132 RRPAVRSNLELRHRMTILIRNFLDNLNFIEVETPILIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +  + E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVNQEDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +K   ++ R   +         +          +     +   R+    +    D     
Sbjct: 247 LKVFEDMSRHLFKEIRGVELPEKLEQMTWQEAMKRYGSDKPDIRFGMEFVELMDDLKGTS 306

Query: 193 DRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEKIEPNLG 231
           D  +        GI V    D      + +      P +G
Sbjct: 307 DFSVFNEANYIGGIVVPGCADYSRKQLNELTDFVKRPQVG 346



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 43/129 (33%), Gaps = 19/129 (14%)

Query: 228 PNLGINCCTILDRYPAPESALANIY--PADPRFTKR--FELYACNIELCNACDELLDPIE 283
                    +   +P       +++     P   +   ++     IE+      + D   
Sbjct: 435 EWSDEEQRLMATHHPFTMPNPDDLHLLDTHPEQVRALAYDFVCNGIEVGGGSIRIHDTEL 494

Query: 284 QRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGAN 337
           Q   FE      ++ +E+       +             P  +GIA G DR V ++ G +
Sbjct: 495 QEKMFEVLGFTRQQAEEQFGFLMNAFH---------YGAPPHAGIAFGLDRYVSIMAGLD 545

Query: 338 NINEVIWTP 346
           +I +VI  P
Sbjct: 546 SIRDVIAFP 554


>gi|291320375|ref|YP_003515638.1| aspartyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752709|emb|CBH40683.1| Aspartyl tRNA synthetase (Aspartate tRNAligase) (AspRS) [Mycoplasma
           agalactiae]
          Length = 567

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 18/202 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +L R  +   +R +  EN F+EI++ +L   +P      R F        + 
Sbjct: 125 RRPEMQKTILFRAKVMHEIRNFLYENDFVEIETPTLAKSTPEG---ARDFLV---GTRNK 178

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G EK +  A  +R+ +     QPEF  L+   +    E  
Sbjct: 179 GQFWALPQSPQLFKQLLMISGFEKYYQIARCYRDEDSRKDRQPEFVQLDIETSFLKVEDF 238

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            K    +++     A            N     + I  A+A   Y   D           
Sbjct: 239 HKTIEKLVKRIMLSAG----------VNVKIPFQKIKYADAIKDY-GSDKPDLRYEYKIT 287

Query: 193 DRHLLYLQAQQAGIRVAHDDTW 214
           D            I+ A     
Sbjct: 288 DIDNFCADTDFVIIKDAKSKRM 309



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 51/152 (33%), Gaps = 17/152 (11%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
             +  ++ I    + E  E     +         A      +  P D      ++L    
Sbjct: 402 KDEYRFAWIVDWPMFEFNEDENKWDAAHHPFTRFAHNLDELDKLPIDKINAVAYDLVLNG 461

Query: 269 IELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
            E+      + D   Q   F      + + + K             FL      +P   G
Sbjct: 462 FEIAGGSARIYDKEMQEKMFNLIGLTKTQQESKFG----------WFLKAFDYGVPPHCG 511

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DRL+ML+T   +I +VI  P +  NQ+
Sbjct: 512 IAFGLDRLIMLLTKQKSIRDVIPFPKNSKNQD 543


>gi|323485941|ref|ZP_08091275.1| hypothetical protein HMPREF9474_03026 [Clostridium symbiosum
           WAL-14163]
 gi|323400755|gb|EGA93119.1| hypothetical protein HMPREF9474_03026 [Clostridium symbiosum
           WAL-14163]
          Length = 598

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 68/191 (35%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +    R++  E  F+EI++ +L   +P     ++            
Sbjct: 141 RRPDLQRNLMIRSRVAILTRKFLAEEGFLEIETPTLIKSTPEGARDYLVPSRVHPGEFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQLLKQLLMCSGYDRYFQIARCYRDEDLRADRQPEFTQIDMELSFVDVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++         K    +  + +     + +T  EA  R+   D        + 
Sbjct: 255 VLDVNERLL---------KTLFKEICDYDLQLPIQRMTWREAMERF-GSDKPDLRFGMEL 304

Query: 192 PDRHLLYLQAQ 202
            +        Q
Sbjct: 305 KNVSDTVKDCQ 315



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 52/156 (33%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  +    D  +  +    L E  E +            P  E         
Sbjct: 415 NLRLELARQLDLLKKDDFRFLWVTEFPLFEYSEEDGRYVAVHHPFTMPMEEDLPLIDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q    E      ++            L    
Sbjct: 475 GAVRAKAYDIVLNGTEMGGGSVRIHQADVQSKMLEVLGFTAER----ANEQFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A GFDR+VML+ GA++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGFDRMVMLMVGADSIRDVIAFPKVK 566


>gi|295091162|emb|CBK77269.1| aspartyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 601

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 67/191 (35%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ + +  R +  E  F+EI++ +L   +P     ++            
Sbjct: 141 RRPDLQKNLMTRSRVTTLTRAFLAEEGFLEIETPTLIKSTPEGARDYLVPSRVHPGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMCSGYDRYFQIARCYRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++         K    +    +     + +T  EA  R+   D        + 
Sbjct: 255 VLDVNERLL---------KKLFKEICGFDLQLPIQRMTWREAMDRF-GSDKPDLRFGMEL 304

Query: 192 PDRHLLYLQAQ 202
            +        Q
Sbjct: 305 KNVSETVKDCQ 315



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  +    D  +  +    L+E  E              P  E         
Sbjct: 415 NLRLELARQLDLLKKDDFKFLWVTEFPLLEYSEEQGRFVAMHHPFTMPMEEDLALIDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K++            L    
Sbjct: 475 GAVRAKAYDIVLNGTEMGGGSVRIHQSDIQSKMFEVLGFTKEQ----ANEQFGFLLEAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DR+VML+ GA++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRMVMLMVGADSIRDVIAFPKVK 566


>gi|323693062|ref|ZP_08107281.1| aspartyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
 gi|323502816|gb|EGB18659.1| aspartyl-tRNA synthetase [Clostridium symbiosum WAL-14673]
          Length = 598

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 68/191 (35%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ +    R++  E  F+EI++ +L   +P     ++            
Sbjct: 141 RRPDLQRNLMIRSRVAILTRKFLAEEGFLEIETPTLIKSTPEGARDYLVPSRVHPGEFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQLLKQLLMCSGYDRYFQIARCYRDEDLRADRQPEFTQIDMELSFVDVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++         K    +  + +     + +T  EA  R+   D        + 
Sbjct: 255 VLDVNERLL---------KTLFKEICDYDLQLPIQRMTWREAMERF-GSDKPDLRFGMEL 304

Query: 192 PDRHLLYLQAQ 202
            +        Q
Sbjct: 305 KNVSDTVKDCQ 315



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 52/156 (33%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  +    D  +  +    L E  E +            P  E         
Sbjct: 415 NLRLELARQLDLLKKDDFRFLWVTEFPLFEYSEEDGRYVAVHHPFTMPMEEDLPLIDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q    E      ++            L    
Sbjct: 475 GAVRAKAYDIVLNGTEMGGGSVRIHQADVQSKMLEVLGFTAER----ANEQFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A GFDR+VML+ GA++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGFDRMVMLMVGADSIRDVIAFPKVK 566


>gi|299144029|ref|ZP_07037109.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518514|gb|EFI42253.1| aspartate--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 591

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 79/290 (27%), Gaps = 15/290 (5%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW----RNGEQGCLHQPEFTMLEWYRA 125
                  +    P+      L    E +            +  +           E+Y  
Sbjct: 282 YAEAMDRFGVDKPDLRFGLELVNISELVKECGFKVFESCTDEGKSVRGINIKNGAEFYSR 341

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               +          +  A +  ++      ++     +     + +  A   ++ +   
Sbjct: 342 KAIGKLEDFVKTYGAKGLAWIKVEENGINSPISKFLSEDVVNDIMNKLKAEIGDLLVFVA 401

Query: 186 LDNPDQPDR--HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
             N    D   +L    A+   +    D     I    L E  E              P 
Sbjct: 402 DKNNIVFDSLGNLRNSVAKDMNLIDKDDFKLLWITEFPLFEYDEDEQRYVAKHHPFTSPM 461

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
            E              K +++     E+      + +P  Q   F      K   + E  
Sbjct: 462 DEDLNLIETAPHLARAKAYDIVINGDEMGGGSIRINNPQIQSKMF------KALGFTEEE 515

Query: 304 PIDED--FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             D+    L       P   G+A G DRLVM  T ++NI +VI  P +QS
Sbjct: 516 AEDKFGFLLEAFKYGAPPHGGLAYGLDRLVMTFTKSDNIRDVIAFPKTQS 565



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           L+ R+ +    R+++    F+EI++  L   +P     ++            + +     
Sbjct: 147 LMTRSKLYKITRDFYYNEGFMEIETPMLTKPTPEGARDYLVPSRVNPGKFYALPQ----- 201

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+ +G ++       +R+ +     QPEFT ++   +    + ++      
Sbjct: 202 -SPQLMKQLLMVSGFDRYMQITKCFRDEDLRANRQPEFTQIDLEMSFVEVDDVIDINERF 260

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++ A           + +N +       +  AEA  R+  +D        +  +   L  
Sbjct: 261 LKYAF---------KEMLNIDIELPLMRMKYAEAMDRF-GVDKPDLRFGLELVNISELVK 310

Query: 200 QA 201
           + 
Sbjct: 311 EC 312


>gi|159897936|ref|YP_001544183.1| aspartyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|238687086|sp|A9B392|SYD_HERA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|159890975|gb|ABX04055.1| aspartyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 594

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 18/167 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY--PAPESALANIY 252
            +    A++  +       ++ +    + E    +   +          PA         
Sbjct: 409 KVRREMAKRLDLADKDLMHFAWVIDFPMFEYNAESGEWDAAHHPFCMVNPADV-EKMQRG 467

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPID 306
             +      ++L     EL +    + D   Q++ F+      +E+Q++     E +   
Sbjct: 468 EFEGVRAASYDLVCNGYELASGSIRIHDRSIQQYIFDRLPYSPEEIQKRFGHMLEAFE-- 525

Query: 307 EDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                     P   G+A G DRLVML+   +NI +VI  P +Q  ++
Sbjct: 526 -------YGAPPHGGMAPGIDRLVMLLADTDNIRDVIAFPKTQRAED 565



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 62/176 (35%), Gaps = 16/176 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              R++  L  R+     +R++     F EI++  L + +P     ++            
Sbjct: 134 RRERQQHILGLRHRTIKFMRDWMDREGFWEIETPILMKSTPEGARDYLVPSRLHPGEFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K F  A   R+ +     QPEFT L+   +      
Sbjct: 194 LPQ------SPQQLKQLLMVSGIDKYFQIARCMRDEDLRADRQPEFTQLDIEMSFV---- 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
                 + +    E    ++ +    +    S    +T A+A   Y +       D
Sbjct: 244 ----EQDDVLDVVERLMTELVANVTPHKRLVSPFPRLTYADAIEYYGSDKPDLRYD 295


>gi|76788619|ref|YP_330636.1| aspartyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|97196930|sp|Q3JYL7|SYD_STRA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|76563676|gb|ABA46260.1| aspartyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 583

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 71/233 (30%), Gaps = 37/233 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y    +FI++++  L   +P     ++ 
Sbjct: 122 DTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A   Y + 
Sbjct: 236 DLETSFLSDQEIQDIVEGMIAKVMKDTKGLEVS---------LPFPRMAYDDAMNNYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLYL----------QAQQAGIRVAHDDTWSDIFSRILI 223
              T  D   Q    ++              +   ++   D        ++  
Sbjct: 287 KPDTRFDMLLQDLTEVVKEVDFKVFSEASVVKAIVVKNKADKYSRKNIDKLTE 339



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 46/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  I    + E  E              P  E+A       
Sbjct: 402 ALRTRIAKELELIDYSKFNFLWIVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +            L  
Sbjct: 462 AKVRAVAYDIVLNGYELGGGSLRINQKDTQERMF------KALGFSAESAQEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|22538241|ref|NP_689092.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76798548|ref|ZP_00780781.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77414043|ref|ZP_00790214.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|46577260|sp|Q8DWV5|SYD_STRA5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|22535154|gb|AAN00965.1|AE014287_5 aspartyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76586112|gb|EAO62637.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77159925|gb|EAO71065.1| aspartyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 583

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 71/233 (30%), Gaps = 37/233 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +  S+R Y    +FI++++  L   +P     ++ 
Sbjct: 122 DTRMRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDNLEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S              +   +A   Y + 
Sbjct: 236 DLETSFLSDQEIQDIVEGMIAKVMKDTKGLEVS---------LPFPRMAYDDAMNNYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLYL----------QAQQAGIRVAHDDTWSDIFSRILI 223
              T  D   Q    ++              +   ++   D        ++  
Sbjct: 287 KPDTRFDMLLQDLTEIVKEVDFKVFSEASVVKAIVVKDKADKYSRKNIDKLTE 339



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 46/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  E+A       
Sbjct: 402 ALRTRIAKELELIDYSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTAETAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +            L  
Sbjct: 462 AKVRAVAYDIVLNGYELGGGSLRINQKDTQERMF------KALGFSAESAQEQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550


>gi|325922682|ref|ZP_08184425.1| aspartyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325546834|gb|EGD17945.1| aspartyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 583

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 77/229 (33%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 105 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 164

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 165 KATPEG---ARDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 218

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +           V+    ++   +
Sbjct: 219 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMIRAIFKEV---------VDVELAAQFPRM 269

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D        +  D   L   ++      A +D    +
Sbjct: 270 TWAEAMRRY-GSDKPDLRIALELVDVAELVKSSEFPVFTAAANDADGRV 317



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    VA       +    + E  E              PA +        A 
Sbjct: 403 ALRLKAGKDFKLVADTWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANAR 462

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 463 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 518

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 519 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 550


>gi|94985225|ref|YP_604589.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|123079904|sp|Q1IZB4|SYD_DEIGD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|94555506|gb|ABF45420.1| aspartyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 577

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 50/144 (34%), Gaps = 14/144 (9%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPADPRFTKRFELYAC 267
                 + +     +E  E              P   +  L           + ++L   
Sbjct: 410 GPRFQVAWVLDFPQLEFDEEAGSWTYMHHPFTAPRPEDIPLFGTERQGEIRAQAYDLVLN 469

Query: 268 NIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
             E+      + DP  Q   F+     E + ++K           FL  L    P   GI
Sbjct: 470 GFEVGGGSIRIHDPAVQTQMFQAIGLSEAEAREKFG--------FFLDALSYGTPPHGGI 521

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A GFDRLVM++ GA++I EVI  P
Sbjct: 522 AWGFDRLVMVMAGASSIREVIAFP 545



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 61/176 (34%), Gaps = 17/176 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+   ++   +     F+++++  L   +P      R F     +    
Sbjct: 130 RRPEMQRHLMLRSRAVAAATAFLDAEGFVQVETPMLTRSTPEGA---RDFLVPSRLN--- 183

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG ++ + FA  +R+ +     QP+FT L+   +  + E 
Sbjct: 184 PGEFYALPQSPQLFKQLLMIAGFDRYYQFARCFRDEDLRADRQPDFTQLDMEMSFVTQED 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
           ++     ++                           ++  EA  RY +       D
Sbjct: 244 VLDVQERLLAHVFRTVLDYELP---------LPFPRLSYQEAMDRYGSDKPDLRFD 290


>gi|319789638|ref|YP_004151271.1| aspartyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114140|gb|ADU96630.1| aspartyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 596

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 74/194 (38%), Gaps = 8/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    LL R+ +   +RE F E  F+E+++  L   +P      R F     I  + 
Sbjct: 141 RRPKMAENLLFRHRLYRVVREVFNEEGFVEVETPYLTKSTPEG---ARDFLVPSRI--YP 195

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT +++  +  +   +
Sbjct: 196 GKFYALPQSPQLFKQILMVAGIDRYYQIARCFRDEDLRADRQPEFTQIDFEMSFVAERDV 255

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M      IR A +           +    + E       +       ++L    D   Q 
Sbjct: 256 MAVAEKFIRRAYKELLG--IEIGEIPVMTYDEAMSRFGTDRPDTRFGLELKEITDIAKQC 313

Query: 193 DRHLLYLQAQQAGI 206
           +  +    A++ GI
Sbjct: 314 NFKVFRSVAEKGGI 327



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 42/135 (31%), Gaps = 13/135 (9%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +    + E  E              P  E     +        + +++    +E+     
Sbjct: 435 VVDFPMFEWNEEEERWEALHHPFTSPKEEDIEKLLENPGAVRARAYDMVLNGVEIGGGSI 494

Query: 277 ELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVM 331
            +     Q   F+     E + K++            L  L    P   G+A G DRL  
Sbjct: 495 RIHREDVQEKVFKVIGLSEEEAKERFG--------FLLEALKYGAPPHGGMAFGLDRLCA 546

Query: 332 LVTGANNINEVIWTP 346
           ++ G  +I +VI  P
Sbjct: 547 IMRGEESIRDVIAFP 561


>gi|254524468|ref|ZP_05136523.1| aspartyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219722059|gb|EED40584.1| aspartyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 583

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 76/229 (33%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +  E  F +I++  L 
Sbjct: 105 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDEKGFQDIETPILT 164

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 165 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 218

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     N+IR   +           V+    +    +
Sbjct: 219 LRADRQLEFTQLDMEFAFVRERDVQDFVENMIRAIFKEV---------VDVELDASFPRM 269

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D        +  D   L   ++        +D    +
Sbjct: 270 TWAEAMRRY-GSDKPDLRIALELVDVAELVKDSEFPVFTGPANDAEGRV 317



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    VA       +    + E  E              PA +        A 
Sbjct: 403 ALRLKAGKDFGLVADGWAPLWVTDFPMFEWDEEEQRYVALHHPFTAPAVDDIADLRANAR 462

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 463 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 518

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 519 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 550


>gi|32267300|ref|NP_861332.1| aspartyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|46577202|sp|Q7VF76|SYD_HELHP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|32263353|gb|AAP78398.1| aspartyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 581

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 68/219 (31%), Gaps = 28/219 (12%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N +   + R               R+    + R    +  F+E+++  L   +P     +
Sbjct: 118 NEELRLKYRYLDLRSPKAYNIFKIRSDAAIATRNSLQKMGFLEVETPILTKATPEGARDY 177

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G +K F  A  +R+ +     QPEFT
Sbjct: 178 LVPSRVHQGEFYALPQ------SPQLFKQLLMMSGFDKYFQIAKCFRDEDLRADRQPEFT 231

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +    E ++    N+++        +                 +  A+A   Y 
Sbjct: 232 QIDIEMSFCEQEDIISVAENLLKDIFSACGTE----------IEIPFMRLPYAQAMESYG 281

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +         P      L    +      +A D   + I
Sbjct: 282 SDKPDLRFCMPLVEVGDLFVDSSNAIFKNIAQDSKNNRI 320



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 17/114 (14%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQ 293
            +P       +    +   +  +++    IEL      +     Q+  FE      +E +
Sbjct: 445 HHPFTMPNDLDKEDIEEITSVAYDVVLNGIELGGGSIRIHKDSIQKRVFELLGISTQEAE 504

Query: 294 EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +K              L  L+   P   GIA+GFDRL+ML++ + +I +VI  P
Sbjct: 505 DKFG----------FLLEALSFGAPPHGGIAIGFDRLIMLLSKSQSIRDVIAFP 548


>gi|307707786|ref|ZP_07644264.1| aspartyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616168|gb|EFN95363.1| aspartyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 587

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTAVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|157115821|ref|XP_001658298.1| aspartyl-tRNA synthetase [Aedes aegypti]
 gi|108883468|gb|EAT47693.1| aspartyl-tRNA synthetase [Aedes aegypti]
          Length = 600

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ I   +REY +    F+E+++ +L + +PG       F        H      L 
Sbjct: 151 LRLRSQIIMKMREYMINQCGFVEVETPTLFRRTPGGAQE---FVVPTRKPGHF---YSLV 204

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L++   ++ F  A  +R+       QPEFT L+   +    +++M     +
Sbjct: 205 QSPQQFKQMLMSGAIDRYFQIARCYRDEATRPDRQPEFTQLDIELSFTDRDKIMTLLEGV 264

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           +  +  V  +                + IT AEA  R+  ID   T    +  D
Sbjct: 265 LASSWPVNGE----------PLKVPFQRITYAEAMNRF-GIDKPDTRFEYELQD 307



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 10/146 (6%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILD--RYPAPESALANIYPADPRFTKRFELYACN 268
           D  +  ++   +    E    +          +P     L          ++ F+L    
Sbjct: 437 DQKFLWVYDFPMFAPNEETGHLESVHHPFTAPHPEDFPKLHEKTDLQVIRSQSFDLVWNG 496

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFD 327
           +E+      + D   Q+   ++ +Q         +   +  L  L    P   G A+G D
Sbjct: 497 VEIGGGSVRIHDGALQKMVLDEVLQI-------EHAHLQHLLDALECGCPPHGGFAVGLD 549

Query: 328 RLVMLVTGANNINEVIWTPFSQSNQE 353
           R + L+  A +I +VI  P S   ++
Sbjct: 550 RYIALLCSAPSIRDVIAFPKSSDGKD 575


>gi|227484951|ref|ZP_03915267.1| aspartate--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227237106|gb|EEI87121.1| aspartate--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 582

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 92/297 (30%), Gaps = 25/297 (8%)

Query: 6   SQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           S+    +  +   R       L  R+ I  ++REYF EN F E+++  L   +P     +
Sbjct: 120 SENLRLKYRYLDMRKPSVQRNLKLRSDIVRTMREYFYENDFTEVETPFLTKPTPEGARDY 179

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+    ++ F     +R+ +     QPEFT
Sbjct: 180 LVPSRINAGKFYALPQ------SPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQPEFT 233

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   +  + + ++     +++   +            + +       +  +EA   Y 
Sbjct: 234 QLDLEMSFSNQDDVIAMNEGLLKVLFDT---------YTDYDLKLPINRMDYSEAMESY- 283

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D           D   +++ ++      A +         I    +E          L
Sbjct: 284 GSDKPDLRYGYKIKDVSEIFVGSEFKV--FADNTGDGRSVRAINFTGLEDKYSRKQLDKL 341

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
             +          Y       +         ++ N   E LD  +    F    ++K
Sbjct: 342 TDFVKDYGLKGLSYIKFNNEMQSSIKKFLTDDVINGLKEKLDAKDGDLIFLAADKDK 398



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 56/161 (34%), Gaps = 14/161 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +    +   + + +  + E  E              P  E     +   
Sbjct: 406 ALRVKIAKDNNL-YEKEYALTWVVNFPMFEYSEEEDRYVAQHHPFTMPNEEDIDLLLTQP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +   T+ +++     E+      + +   Q+  FE     +   K K           F+
Sbjct: 465 EKVRTQAYDIVINGDEMGGGSVRINNSDLQKKVFEALKLSDEDIKIKFG--------FFI 516

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             L    P  +G+A G DRL+ML    +NI ++I  P +QS
Sbjct: 517 EALQYGTPPHAGLAYGLDRLLMLFAKTDNIKDIIAFPKTQS 557


>gi|289522219|ref|ZP_06439073.1| aspartate--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289504055|gb|EFD25219.1| aspartate--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 603

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 64/188 (34%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+   +  R +  +  F+E+++  L   +P     ++            
Sbjct: 148 RREVMQRNLRLRSKAANYTRTFLTDAGFVEVETPMLTKSTPEGARDYLVPSRVNPGKFYA 207

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +  + E 
Sbjct: 208 LPQ------SPQIFKQILMISGLDRYFQIVKCFRDEDLRADRQPEFTQIDIEMSFLTEED 261

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +   + ++                     +    ++ +EA  R+   D        + 
Sbjct: 262 IFELIEDYMKGLFRETIGVEIQ---------TPFPRLSYSEAMERF-GSDKPDLRIPFEI 311

Query: 192 PDRHLLYL 199
            D   ++ 
Sbjct: 312 VDLKAVFQ 319



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 58/163 (35%), Gaps = 13/163 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    L E  E              P  E         
Sbjct: 419 QLRLEVARKYDLIEKGKWAFLWVVDFPLFEWSETENRYVSVHHPFTSPKNEDLYLLESEP 478

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
               ++ +++     E+      + DP  Q   F+     E++ K +            L
Sbjct: 479 WKVRSRAYDIVLNGNEVGGGSIRIHDPKVQESVFKALGLDEVEAKNRFG--------FLL 530

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           + L    P   GIA+GFDRLVML+ GA +I +VI  P +Q  Q
Sbjct: 531 SALSYGTPPHGGIALGFDRLVMLLAGAKSIRDVIAFPKTQKAQ 573


>gi|241948653|ref|XP_002417049.1| aspartyl-tRNA synthetase, mitochondrial [Candida dubliniensis CD36]
 gi|223640387|emb|CAX44638.1| aspartyl-tRNA synthetase, mitochondrial [Candida dubliniensis CD36]
          Length = 683

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 76/234 (32%), Gaps = 20/234 (8%)

Query: 22  LLKRNMIQSSLREYF-VENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+     +R  F   + F+EI++  L + +P      R F       +       L 
Sbjct: 179 LRLRSEAAKVIRNIFIENHDFVEIETPLLFKSTPEG---AREFLVPTRSFNKF---YALP 232

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+++G  + F  A  +R+ +     QPEFT ++   +  +    +   +  
Sbjct: 233 QSPQQYKQILMSSGFTRYFQVAKCFRDEDLRSDRQPEFTQIDLEMSFVNNSDQVGIVVED 292

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSE-----------PEYITVAEAFARYANIDLGTTLDN 188
           +            +++  +     +              +   +A  +Y  ID      N
Sbjct: 293 VIHNVWNKVGGKPTYKVNDEGFLEKVDLAEAGKSLQFNKLNYIDALVKY-GIDKPDLRSN 351

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                   +++  + A   V       + F     +   P   I+      R P
Sbjct: 352 LSFISLEDIFVAKENADFPVVEVCVLKEAFDASSGKYKLPKTFIDDHNFSSRRP 405



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 81/214 (37%), Gaps = 13/214 (6%)

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                F   N  P  +   + + E   ++    +     + D  DR+ + + +      +
Sbjct: 455 STRAQFPYENPTPLGKFRQLAIEEFPHKWQRPIIENGQLSVDY-DRNDMVVGSWVVNFPL 513

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCC--TILDRYPAPESALANIY----PADPRFTKRF 262
            +    S + S    E ++P   +          +P   + + +             + +
Sbjct: 514 FNPVEESSLISSATQENLKPKYPLYNFKKFESTHHPFTMAKIEDYDLLETNPLKVHGEHY 573

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
           +L    +E+      + DP  Q++ FE+ +Q           +    L  L+   P  +G
Sbjct: 574 DLVINGVEVGGGSRRIHDPALQQYIFEEILQISNF-----QQLFGHLLKALSMGCPPHAG 628

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
           +A+GFDRL  ++ G+ +I +VI  P +QS  + +
Sbjct: 629 LALGFDRLCAMLVGSPSIRDVIAFPKNQSGVDPV 662


>gi|297584744|ref|YP_003700524.1| aspartyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297143201|gb|ADH99958.1| aspartyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 594

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R    +  R      +R+   E QF+EI++  L   +P     ++            
Sbjct: 135 RRTRMADTMQMRYRTTKLIRDILDEEQFMEIETPILTKSTPEGARDYLVPSRVHEGEFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G E+ +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 195 LPQ------SPQLFKQLLMVSGFERYYQIARCFRDEDLRADRQPEFTQVDIEASFMGKEN 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L+    +++    +                 +    +T  EA  R+   D        + 
Sbjct: 249 LLSMMESMMVRLVKELKGVDVE---------TPFLRLTYHEAMERF-GSDKPDLRFGMEL 298

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 299 KDVSEIVK 306



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 49/157 (31%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A++  +    D  +  +    L+   E +            P  E         
Sbjct: 410 NLRNKFAKELNLFDPEDFNFLWVTEFPLLSYDEDHKRYVAEHHPFTRPVEEDVELLTTAP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +    + ++L     EL      + +   Q   F      + + K +            L
Sbjct: 470 EQVRAEAYDLVLNGYELGGGSQRIYERDLQEKMFTALGFSDEEAKAQFG--------FLL 521

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   GIA+G DRLVM++    N+ + I  P
Sbjct: 522 DAFEYGTPPHGGIALGLDRLVMILAERTNLRDTIAFP 558


>gi|331642480|ref|ZP_08343615.1| aspartyl-tRNA synthetase (Aspartate--tRNA ligase)(AspRS)
           [Escherichia coli H736]
 gi|320186111|gb|EFW60855.1| aspartyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|331039278|gb|EGI11498.1| aspartyl-tRNA synthetase (Aspartate--tRNA ligase)(AspRS)
           [Escherichia coli H736]
          Length = 200

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 18  ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 76

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 77  ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 126

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 127 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 165


>gi|307138529|ref|ZP_07497885.1| aspartyl-tRNA synthetase [Escherichia coli H736]
          Length = 202

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 20  ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 78

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 79  ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 128

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 129 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 167


>gi|300769899|ref|ZP_07079778.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762375|gb|EFK59192.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 587

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 11/139 (7%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L+ R+ +   +R Y  E  F+E+++  L   +P      R F     +   
Sbjct: 131 LRRNPVRQNLILRHKLAQEIRRYLDEQNFLEVETPVLIKSTPEG---ARDFVVPSRMNAG 187

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E
Sbjct: 188 ---EFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQE 244

Query: 131 QLMKDCMNIIRCAAEVANQ 149
            ++     + +   +    
Sbjct: 245 DILNMFEGLAKHLFKTVKG 263



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 50/158 (31%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    L+E  E +   +        P PE         
Sbjct: 403 ELRLEVGNQLGLRDKNKFAPLWVLDFPLLEWDEESGRYHAMHHPFTSPKPEDIPLLDTNP 462

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                  ++      E+      + D   Q   F+      ++ Q++     E +     
Sbjct: 463 GEVRANAYDFVLNGSEIGGGSIRIHDKELQSLMFKHLGFSPEDAQKQFGFLMEAFT---- 518

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   G+A GFDR+V +  G + I +VI  P
Sbjct: 519 -----YGAPPHGGLAFGFDRMVSVFAGLDTIRDVIAFP 551


>gi|43085|emb|CAA37932.1| tls [Escherichia coli K-12]
          Length = 209

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 18/159 (11%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+          +    + E      G+         P   +A       
Sbjct: 27  ALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGE-GGLTAMHHPFTSPKDMTAAELKAAP 85

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
           +      +++     E+      + +   Q+  F      E+E +EK             
Sbjct: 86  ENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFG----------F 135

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 136 LLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 174


>gi|255526676|ref|ZP_05393581.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187181|ref|ZP_06855578.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255509656|gb|EET85991.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048216|gb|EFG87653.1| aspartyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 591

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 69/206 (33%), Gaps = 8/206 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +   + R+     +R++  +N F+E+++  L + +P     ++          + 
Sbjct: 139 RRPDMQKIFMIRHKAGKVVRDFLDQNGFLEMETPILGKSTPEGARDYLVPSR------NF 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             K   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 193 PGKFYALPQSPQLFKQLLMVSGYDRYFQIAKCFRDEDLRANRQPEFTQIDMELSFVEEDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M+    +++   +                    E     +   R+       +    D 
Sbjct: 253 VMELNERLVQKVFKEIAGVDVKLPIERMPYKVAMEKYGSDKPDLRFGMEINDISETVKDI 312

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
             +      A    +R       + +
Sbjct: 313 DFKVFQDALANGGSVRAIKAPNCASM 338



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 46/150 (30%), Gaps = 10/150 (6%)

Query: 201 AQQAGI-RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
           A++ GI    ++  +  +    L    E              P  E              
Sbjct: 418 AKETGILENNNEYRFVWVTEFPLFSYNEEEQRFQAEHHPFTAPMDEDIQYLESDPGRVRA 477

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--TYPIDEDFLACLT-EM 316
           K +++     EL      + D   Q          K   + E   +      L       
Sbjct: 478 KAYDIVLNGEELGGGSIRIHDIKLQEKML------KVLGFTEERAWNSFGFLLEAFKFGA 531

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A GFDR++M + G  NI +VI  P
Sbjct: 532 PPHGGLAYGFDRMIMFLAGTENIKDVIAFP 561


>gi|227549176|ref|ZP_03979225.1| aspartyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078736|gb|EEI16699.1| aspartyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 602

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 68/187 (36%), Gaps = 17/187 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R+   L  R+    + RE    + F EI++ +L   +P      R F     +    
Sbjct: 133 RRERQAAALRLRSDANRAAREVLSRHDFTEIETPTLTRSTPEG---ARDFLVPARL--RP 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ F  A  +R+ +     QPEFT L+   +    + +
Sbjct: 188 GSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQPEFTQLDIEASFVDQDDI 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++    I+    ++   +I +              +T AEA  +Y   D        +  
Sbjct: 248 IELAEEILVELWKLIGVEIST----------PIPRMTYAEAMEKY-GSDKPDLRFGIELV 296

Query: 193 DRHLLYL 199
           D    + 
Sbjct: 297 DCTEFFK 303



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +            P PE   +            +++     E+      +     Q   F
Sbjct: 445 HSKWTAVHHAFTSPKPEYLESFDSEPGEALAYAYDIVCNGNEIGGGSIRIHQRDVQERVF 504

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +           ET       L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 505 KVMGIT----GEETQEKFGFLLEAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 559


>gi|84623197|ref|YP_450569.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|97197041|sp|Q2P582|SYD_XANOM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97197048|sp|Q5H2B1|SYD_XANOR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84367137|dbj|BAE68295.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 588

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 78/229 (34%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 110 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     +++R   +           V+ +  ++   +
Sbjct: 224 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMMRAIFKEV---------VDVDLAAQFPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D        +  D   L   ++      A +D    +
Sbjct: 275 TWAEAMRRY-GSDKPDLRIALELVDVAELVKSSEFPVFTAAANDADGRV 322



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    VA       +    + E  E              PA +        A 
Sbjct: 408 ALRLKAGKEFDLVAEGWAPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRANAR 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 468 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 524 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 555


>gi|58617416|ref|YP_196615.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|81311310|sp|Q5FG09|SYD_EHRRG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|58417028|emb|CAI28141.1| Aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 590

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 76/259 (29%), Gaps = 11/259 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  ++ R+ + + +R+      FIEI +  L   SP     ++            
Sbjct: 135 RRDKVKNNIILRSKVITEIRKSMENMGFIEIQTPILTSSSPEGARDYLVPSRIHHGKFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  + E
Sbjct: 195 LPQ------APQLFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVTQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      ++       + K  + +    +      Y    +   R   +    T    D
Sbjct: 249 DIFNIIEPLMINIFSKFSSKTINKEFPKISYHDAMLYYGSDKPDLRNPLVIQDVTEIFRD 308

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE--PNLGINCCTILDRYPAPESAL 248
              +       Q   +R       +         KIE    LG      +       +  
Sbjct: 309 SEFKIFNSNIKQGMVVRAIPAPNTAHNPRSFFDSKIEFAKTLGAQGLGYITFIDDSLAKG 368

Query: 249 ANIYPADPRFTKRFELYAC 267
                 D       +L   
Sbjct: 369 PIAKFLDKDRLDNIKLICN 387



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 50/163 (30%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +  L  ++  +   +   +  +      +       IN        P            
Sbjct: 410 EVRTLLGKELNLIEENTFKFCWVIDFPYFKYDHKEKSINFFHNPFSMPQGGLEALENQDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    IE+ +              F          Y +   +DE F     
Sbjct: 470 LNILAYQYDIVCNGIEISSGAIRNHKLNIMYKAFSI------AGYTKEM-VDEKFKALTR 522

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR+VML+    NI EVI  P +QS ++
Sbjct: 523 AFKFGAPPHGGIAPGIDRIVMLLADVPNIREVICFPLNQSGED 565


>gi|169833717|ref|YP_001695474.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|238688324|sp|B1I9S9|SYD_STRPI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|168996219|gb|ACA36831.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 587

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|163782929|ref|ZP_02177924.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881609|gb|EDP75118.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 603

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 68/195 (34%), Gaps = 9/195 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
             +     +L R+      R +F E  F+EI++  L   +P      R F     +    
Sbjct: 141 RRFSMMENMLFRHKFYQLTRRFFEEEGFVEIETPFLTKSTPEGA---RDFIVPSRLH--- 194

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT +++  +  + + 
Sbjct: 195 PGKFYALPQSPQLFKQILMVSGFDRYFQVVKCFRDEDLRADRQPEFTQIDYEMSFVNEDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +       S            E     +   R+  ++L    D    
Sbjct: 255 VIGVAERLVAHLFKELLGVELSTPFERLPYGEVMERFGSDKPDRRF-GLELIELSDIFKN 313

Query: 192 PDRHLLYLQAQQAGI 206
            +  +      + GI
Sbjct: 314 TEFKVFKGVLDKGGI 328



 Score = 91.6 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 44/165 (26%), Gaps = 17/165 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+  G+          +    L+E  E              P  E         
Sbjct: 413 ALRLELAKSHGLIDESRWDVLWVVDFPLMEWDEEEGRFVSLHHPFTAPREEDIPKLKEAL 472

Query: 255 DPRFTKR------------FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                +             ++L     E+      +     Q   F    +       E 
Sbjct: 473 KTDDIEERKRLVHSVRARAYDLVINGEEVGGGSIRIHTTDLQEVVF----KLLDIGEVEA 528

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  L  L    P   G+A G DRLV L+ G ++I +VI  P
Sbjct: 529 QEKFGFLLEALRFGAPPHGGLAFGLDRLVALMRGLDSIRDVIAFP 573


>gi|156847162|ref|XP_001646466.1| hypothetical protein Kpol_1048p39 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117143|gb|EDO18608.1| hypothetical protein Kpol_1048p39 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 660

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 85/263 (32%), Gaps = 14/263 (5%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +      + FL KR  I + +REY     F E+++  L + +P      R F 
Sbjct: 152 PPEYRYLQLRLPEYQKFLKKRYNISTRIREYLASKAFTEVETPILFKSTPEG---AREFL 208

Query: 64  TELIIQDHIRK-PLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                +  + K PL+  L  SP+   + L+A+G  + F  A  +R+ +     QPEFT +
Sbjct: 209 VPTRKESTVGKLPLFYSLPQSPQQYKQLLMASGVNRYFQIAKCFRDEDLRADRQPEFTQV 268

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAE------VANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           +   A  S E +M     +I    +             + + V        + +T  EA 
Sbjct: 269 DLEMAFSSGEDVMNVVEELIPSVWKEFAESGPLLTLNENDELVEVTKEQPAKRMTYKEAM 328

Query: 175 ARYANIDLGTTLDNPDQPDR-HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
            +Y          N    D         Q     V       + F  I           N
Sbjct: 329 TKYGIDKPDLRAPNLQITDLSEFNVHSTQHKNFPVFEVMVLKNAFRNIEDYNKNWTHLSN 388

Query: 234 CCTILDRYPAPESALANIYPADP 256
                 R P            + 
Sbjct: 389 SDNYPYRTPIVVPIADEETRLNW 411



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 11/126 (8%)

Query: 236 TILDRYPAPE---SALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEK 290
                +P           +   DP     + ++L    +EL      + DP  Q + F  
Sbjct: 516 FTSTHHPFTMVRLQDYEKLSTDDPSQCLGQHYDLVVSGVELGGGSTRIHDPELQNYIFHN 575

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            ++       E   +    L       P  +G+A+GFDR+  +V G N+I +VI  P S 
Sbjct: 576 ILKI---NDPE--NLFGHLLQAFKMGTPPHAGLAIGFDRMCAMVCGRNSIRDVIAFPKSI 630

Query: 350 SNQEEI 355
           S  + +
Sbjct: 631 SGSDTV 636


>gi|257452137|ref|ZP_05617436.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058682|ref|ZP_07923167.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684358|gb|EFS21193.1| aspartyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 594

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 78/230 (33%), Gaps = 20/230 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ +  ++R Y  +  F+++D+  L   +P      R F     I    
Sbjct: 135 RRPKMIQNLKMRHRMIMAIRNYMDQAGFLDVDTPILTKSTPEG---ARDFLVPSRIN--- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +  + + 
Sbjct: 189 GGTFYALPQSPQIFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDVEMSFVTQDD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           E +  A A   Y +          + 
Sbjct: 249 VMNEIEGLAKYVFKHVTGEEANYT---------FERMPYAIAMGEYGS---DKPDLRFEV 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             + L  + A+ +    +       I   I+  K             + Y
Sbjct: 297 KLKDLSDVVAKSSFKAFSATVENGGIVKAIVAPKAFEKFSRKVLGEYEDY 346



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 6/147 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN-CCTILDRYPAPESALANIYPADPRFTK 260
           ++ G+   +   +  +    + E  E                  +         D   T 
Sbjct: 418 KELGLIDMNSYKFLWVVDFPMFEYDEEEGRYKAEHHPFTSIKEEDMEKFLAGQTDNIRTN 477

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            ++L     E+      + +   Q   FE+          E       FL       P  
Sbjct: 478 TYDLVLNGSEIGGGSIRISNTELQAKVFERLSLS----PEEAKEKFGFFLDAFKYGAPPH 533

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            G+A G DR +M++    +I +VI  P
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFP 560


>gi|225861929|ref|YP_002743438.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298231028|ref|ZP_06964709.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254087|ref|ZP_06977673.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501615|ref|YP_003723555.1| aspartate--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|254781758|sp|C1CU16|SYD_STRZT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225727479|gb|ACO23330.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237210|gb|ADI68341.1| aspartate--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|327388849|gb|EGE87197.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 587

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRVKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|306828557|ref|ZP_07461752.1| aspartate--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304429356|gb|EFM32441.1| aspartate--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 587

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 46/148 (31%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+  +    +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDSDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     EL      +     Q   F  +         E        L  +    P 
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF--QALGFSA--EEANDQFGFLLEAMDYGFPP 522

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A+G DR VML+ G  NI EVI  P
Sbjct: 523 HGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 72/224 (32%), Gaps = 19/224 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I            +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMRETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILI 223
               T    D   +      A +   ++ A D+       ++  
Sbjct: 296 LQDLTAVVKDVDFKVFSEAPAVKAIVVKGAADNYSRKDIDKMTE 339


>gi|294618766|ref|ZP_06698293.1| aspartyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291594954|gb|EFF26304.1| aspartyl-tRNA synthetase [Enterococcus faecium E1679]
          Length = 589

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              +    +  RN    ++R Y  +N F++I++  L + +P     ++            
Sbjct: 135 RRPKMTKNIKLRNATTKAIRHYLDDNDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E+
Sbjct: 195 LPQ------SPQLFKQLLMNAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETTFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +       +              +T  EA ARY   D   T  + + 
Sbjct: 249 IQTYTEGLIAKVMKEVRGIEVT---------LPFPRMTYDEAIARY-GSDKPDTRFDMEL 298

Query: 192 PD 193
            D
Sbjct: 299 ID 300



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 47/146 (32%), Gaps = 5/146 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +      E  E              P  E            + + 
Sbjct: 415 KELGLIDESKFNFLWVTDWPQFEFSEEEGRYVSAHHPFTMPKEEDIPLLAEDPAKVYAEA 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q    E     K+++  E +      L  L    P   
Sbjct: 475 YDIVLNGYELGGGSIRIHTRELQEKVLETLGFTKEQM-EEQFG---FLLTALDYGFPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA+G DR  ML+ G +NI EVI  P
Sbjct: 531 GIALGLDRFAMLLAGEDNIREVIAFP 556


>gi|256052806|ref|XP_002569941.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|227284697|emb|CAY17471.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 412

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 59/169 (34%), Gaps = 11/169 (6%)

Query: 11  NRDFHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
            R  + +R   +  R+ I   +R +    N F EI++  L      E+  R F       
Sbjct: 165 LRSSNMQRN--MRFRSSIILQMRSFLCQNNGFTEIETPYLFKITPGESGAREFVVPTKFP 222

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
                   L  SP+   + L+ +G  K    A  +R+       QPEFT L+   A  + 
Sbjct: 223 ---GLWYCLPQSPQQFKQLLMISGFSKYMQVARCFRDETSRSDRQPEFTQLDIEMAFITP 279

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           + + +   N++               +      +    +   +A +RY 
Sbjct: 280 DDIYEIIENMLLYIWPTVQST-----SGCQPISTPFMRMQYCDAMSRYG 323


>gi|15806364|ref|NP_295070.1| aspartyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|24212427|sp|Q9RUN7|SYD_DEIRA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|6459100|gb|AAF10918.1|AE001981_3 aspartyl-tRNA synthetase, discriminating [Deinococcus radiodurans
           R1]
          Length = 577

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 50/145 (34%), Gaps = 16/145 (11%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDR--YPAPESALANIYPADPRFTKRFELYA 266
                 S +     +E  E +             +P   +             + ++L  
Sbjct: 411 GPQFHVSWVVDFPQLEFDEDSQSWTYMHHPFTAPHPGDVALFGTE-RQGEMRAQAYDLVM 469

Query: 267 CNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
              E+      + DP  Q   F+     E   ++K           FL  L    P   G
Sbjct: 470 NGFEIGGGSVRIHDPEVQAKMFQAIGFSEEAAREKFG--------FFLDALEYGTPPHGG 521

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA GFDRL+ML++GA +I EVI  P
Sbjct: 522 IAWGFDRLLMLMSGAGSIREVIAFP 546



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 62/176 (35%), Gaps = 17/176 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+   +++ E+     FI++++  L   +P      R F     +    
Sbjct: 131 RRPEMQRALMLRSKAVTAVTEFLDAEGFIQVETPMLTKSTPEG---ARDFLVPSRLN--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG ++ +  A  +R+ +     QP+FT L+   +    + 
Sbjct: 185 PGEFYALPQSPQLFKQLLMIAGFDRYYQLARCFRDEDLRADRQPDFTQLDMEMSFVEQDD 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
           +++    ++                           ++  +A  RY +       D
Sbjct: 245 VLEVQERLLAHVFRRVLDVELP---------LPFPRMSYFDAMDRYGSDKPDLRFD 291


>gi|312865833|ref|ZP_07726055.1| aspartate--tRNA ligase [Streptococcus downei F0415]
 gi|311098708|gb|EFQ56930.1| aspartate--tRNA ligase [Streptococcus downei F0415]
          Length = 582

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 72/224 (32%), Gaps = 19/224 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DNRLRYRYLDLRRPSMLKNLKLRAKVTHSVRNYLDELEFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVSQGHFYALPQ------SPQITKQLLMNAGLDRYYQIVKCFRDEDLRGDRQPEFTQI 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    E++ +    +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLDEEEIQEITEGLIARVMKETKGIDVTLPFPRMAYDDAMNNYGSDKPDTRFDML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILI 223
               T    D   +      A +   ++ A D        ++  
Sbjct: 296 LQDLTDTVKDIDFKVFAQAPAVKAIVVKDAADKYSRKAIDKLTD 339



 Score = 91.6 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 47/157 (29%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  E+A       
Sbjct: 402 ALRTRLAKELDLIDQSQFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPTQETADQLEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  +++     EL      +     Q    +     +    ++            L
Sbjct: 462 SKVRAVAYDIVLNGYELGGGSLRINHKDLQERMLKALGFSQESANEQFG--------FLL 513

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +    P   G+A+G DR VM++ G +NI EVI  P
Sbjct: 514 EAMDYGFPPHGGLAIGLDRFVMILAGQDNIREVIAFP 550


>gi|294674130|ref|YP_003574746.1| aspartate--tRNA ligase [Prevotella ruminicola 23]
 gi|294473699|gb|ADE83088.1| aspartate--tRNA ligase [Prevotella ruminicola 23]
          Length = 593

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 73/221 (33%), Gaps = 10/221 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +     FIE+++  L   +P      R F     +    
Sbjct: 132 RRAAVRKNLELRHRMTILIRNFLDAQNFIEVETPILIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQEDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++   ++ R   +           +    ++E      ++       ++    +D     
Sbjct: 247 LQIFEDLARHLFKEVRG--IELPALQRMTWNEAMRRFGSDKPDLRFGMEFVELMDQLKGT 304

Query: 193 DRHLLYLQAQQAGIRVAHDD--TWSDIFSRILIEKIEPNLG 231
               ++ +A   G                 +      P +G
Sbjct: 305 GTFPVFNEATYIGGICVPGCANYSRKQLDELTEFVKRPQVG 345



 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 43/153 (28%), Gaps = 7/153 (4%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L      + G+R         I    L E  +    +         P P+          
Sbjct: 406 LRLEMGDRLGLRDKDKFVCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDTDPA 465

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL- 313
                 ++     +E+      + D   Q   F+           E         +    
Sbjct: 466 KVRAVAYDFVCNGVEVGGGSLRIHDGKLQEKMFQIL-----GFTPERAMAQFGFLINAFK 520

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A G DR V L+ G ++I + I  P
Sbjct: 521 YGAPPHAGLAFGLDRFVSLMAGLDSIRDCIAFP 553


>gi|223940159|ref|ZP_03632021.1| aspartyl-tRNA synthetase [bacterium Ellin514]
 gi|223891176|gb|EEF57675.1| aspartyl-tRNA synthetase [bacterium Ellin514]
          Length = 601

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 71/189 (37%), Gaps = 18/189 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                   L  R+ + ++ R +  E  F+E+++ +L + +P      R F      +   
Sbjct: 138 RRPEMARNLRLRSKVATATRVFMDEQGFLEVETPTLFKSTPEG---AREFLVPNRRE--- 191

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G E+ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 192 PGTFYALPQSPQQFKQILMVSGVERYFQLARCYRDEDLRADRQPEFTQVDIEMSFIDRED 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++         K      +N +  +  + I+  EA  RY  ID   T    + 
Sbjct: 252 IYSLIEGLL---------KRVWKTALNMDIPTPFKRISFEEALNRY-GIDKPDTRIGMEL 301

Query: 192 PDRHLLYLQ 200
            D    +  
Sbjct: 302 VDFTEEFRA 310



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 52/138 (37%), Gaps = 14/138 (10%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYP--APESALANIYPADPRFT--KRFELYACNIELC 272
            F  ++   +              +P  AP +    +   DP+    + +++    +EL 
Sbjct: 434 DFLWVVEFPLLSFDKEQNRWYSSHHPFTAPVADDIPLLKTDPKKVRGQHYDVVVNGVELG 493

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQSSGIAMGFDR 328
                +  P  Q+  FE+ +Q           +   F   L       P   GIA+GFDR
Sbjct: 494 GGSIRIHQPDVQKTIFEEVLQI------PPEMVKARFGYMLEAFRYGAPPHGGIALGFDR 547

Query: 329 LVMLVTGANNINEVIWTP 346
           L+ ++ G  +I +VI  P
Sbjct: 548 LIAILCGTPSIRDVIAFP 565


>gi|30250184|ref|NP_842254.1| aspartyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|46577227|sp|Q82SQ5|SYD_NITEU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|30180979|emb|CAD86164.1| aspartyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 593

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 5/138 (3%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
                  +    + E  E              P+               ++ +++    +
Sbjct: 424 DSWQPLWVVDFPMFEWDEEEKRWQALHHPFTSPSQGHEDFLTSDPGKALSRAYDMVLNGM 483

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDR 328
           E+      +     Q   F+          +E        L  L    P   GIA G DR
Sbjct: 484 EIGGGSIRIHRQDIQSKVFQALNIS----DDEAKLKFGFLLDALQYGAPPHGGIAFGLDR 539

Query: 329 LVMLVTGANNINEVIWTP 346
           +V ++TGA++I +VI  P
Sbjct: 540 IVAMMTGADSIRDVIAFP 557



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 75/206 (36%), Gaps = 29/206 (14%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP +      R+ +  ++R +  ++ FI++++  L   +P     ++            
Sbjct: 131 RRPVMQRNIRLRHQVTMAVRIFLDQHGFIDVETPMLTKSTPEGARDYLVPSRVNAGHFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +     +
Sbjct: 191 LPQ------SPQLFKQLLMVSGFDRYYQITRCFRDEDLRADRQPEFTQIDIETSFLPENE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG-------- 183
           +M    ++IR                + +       ++ A+A   Y +            
Sbjct: 245 IMGMMEDMIRRLFASVL---------DISLPDPFPRLSYADAMFLYGSDKPDLRVPLVLT 295

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVA 209
              D        +    AQ+AG RVA
Sbjct: 296 ELTDLMQDVPFQVFRDAAQKAGGRVA 321


>gi|320527500|ref|ZP_08028680.1| aspartyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320132057|gb|EFW24607.1| aspartyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 590

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 67/205 (32%), Gaps = 17/205 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   + R            L+ R+ +    R    +  F+E+++  L   +P      R 
Sbjct: 122 DTRLKYRYLDLRRSILQQNLILRHRVCMVARNVLDKQGFVEVETPILARSTPEG---ARD 178

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           +     I +   K   L  SP+   + L+  G EK F  A  +R+ +     QPEFT ++
Sbjct: 179 YLVPSRIYN--GKFWALPQSPQIYKQLLMIGGMEKYFQIARCFRDEDLRADRQPEFTQID 236

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + +     ++++   +           V              +   R+   +
Sbjct: 237 IEMSFGDEDTIFAVVEDLMQNIFKETKNYTLEDHFVRIPWAECMRRFGSDKPDMRF-GNE 295

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGI 206
           +       +  +  +     +  GI
Sbjct: 296 IQDITSVFENTEFQVFKNTIENGGI 320



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 45/137 (32%), Gaps = 17/137 (12%)

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
              + E  E +            P  E             ++ ++L     EL +    +
Sbjct: 433 DFPMFEYSEEDERWVAAHHPFTAPKEEDVDKLFTDPGHVSSRAYDLVLNGYELLSGSIRI 492

Query: 279 LDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVM 331
                Q   FE      ++ + +             FL       P   G+ +G +RL+M
Sbjct: 493 HSQELQAKVFEAIGLSLEDAKARFG----------FFLDSFRYGTPPHGGVGIGLERLIM 542

Query: 332 LVTGANNINEVIWTPFS 348
           ++ G +NI +V+  P +
Sbjct: 543 VLAGTDNIRDVVAFPTT 559


>gi|323340841|ref|ZP_08081093.1| aspartate--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323091964|gb|EFZ34584.1| aspartate--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 586

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 45/148 (30%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +       +  +    L E  E              P  E              
Sbjct: 412 IAKELDLIDNSKFAFIWVVDWPLFEYSEEFERYIAAHHPFTMPNEEDLDLLETDPHKCHA 471

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           + +++     EL      +     Q   F+     K+    E       F+  L    P 
Sbjct: 472 QSYDIVLNGYELGGGSIRIHRRDIQEKMFKALGFTKESA--EAQF--GWFMEALDYGFPP 527

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+ +G DR  ML+ G +NI EVI  P
Sbjct: 528 HGGLGLGLDRFAMLLAGKDNIREVIAFP 555



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 61/168 (36%), Gaps = 8/168 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ RN I  ++  Y  EN F++I++  L   +P     ++            
Sbjct: 134 RRPEMQRSLMIRNRITQTVHRYLDENHFLDIETPYLTRSTPEGARDYLVPSRVYPGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 194 LPQ------SPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQPEFTQIDMEMSFMTADE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           + +    +++   +                    +     +   R+  
Sbjct: 248 IREMTEGLLKAVMKETLGIEIETPIKQITWNEAMDRFGSDKPDIRFGM 295


>gi|170289122|ref|YP_001739360.1| aspartyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|238688849|sp|B1LBH9|SYD_THESQ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|170176625|gb|ACB09677.1| aspartyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 579

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 69/196 (35%), Gaps = 9/196 (4%)

Query: 11  NRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQ 69
            R    +R   L  R  I   +R+YF E  F+EI++  L   +P      R F     + 
Sbjct: 129 LRSERMKRNIILRYR--ISKIIRDYFDELGFLEIETPFLTKSTPEGA---RDFLVPSRL- 182

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
               K   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    
Sbjct: 183 -RPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQPEFTQVDVEMSFVDV 241

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E ++     ++      ++                 E     +   RY  ++L       
Sbjct: 242 EDVLNVSEGMVSRVFRESSGIDLKVPFDRIPYDEAMEKYGTDKPDRRY-GMELRDFGYAF 300

Query: 190 DQPDRHLLYLQAQQAG 205
           +  +  ++     + G
Sbjct: 301 ETTEFKVIRNVLDEGG 316



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 47/193 (24%), Gaps = 8/193 (4%)

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
               +   E   I   E                        L     + G          
Sbjct: 362 PHLKHLEKEFRKIAETENMNE--GDVCLIAAHTDRNLLNEALGTLRLEIGKEHFSHLAKG 419

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNA 274
                ++              +   +P     L  +         K ++L     E+   
Sbjct: 420 FDVLWVVDFPYFEWSEEEERFVARHHPFTMPVLETLGDDYTKVRAKAYDLVINGYEVGGG 479

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLV 333
              +     Q   FE           E       FL      +P   GIA G DRLV ++
Sbjct: 480 SIRIHRRDIQEKIFE----LLGLSEEEAQKKFGFFLEAFRYGVPPHGGIAFGLDRLVSII 535

Query: 334 TGANNINEVIWTP 346
            G ++I EVI  P
Sbjct: 536 AGESSIREVIAFP 548


>gi|225859869|ref|YP_002741379.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254781753|sp|C1CAU1|SYD_STRP7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225721728|gb|ACO17582.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 587

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRVKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|13357846|ref|NP_078120.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761954|ref|YP_001752370.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920413|ref|ZP_02931733.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508678|ref|ZP_02958171.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701928|ref|ZP_02971573.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|27923864|sp|Q9PQK5|SYD_UREPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|11271291|pir||D82910 aspartyl-tRNA synthetase UU286 [imported] - Ureaplasma urealyticum
 gi|6899259|gb|AAF30695.1|AE002125_6 aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827531|gb|ACA32793.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902855|gb|EDT49144.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675596|gb|EDT87501.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700672|gb|EDU18954.1| aspartyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 578

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 29/189 (15%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
           N +  +R R               R+ +  + R Y     FIE ++  L   +P      
Sbjct: 115 NEEIRFRYRYLDLRRDVNLKIFELRSKVYQAFRNYLYSQDFIETETPILAKPTPEG---A 171

Query: 60  RAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           R F           +  Y L  SP+   + L+ AG +K F     +R+ +     QPEFT
Sbjct: 172 RDFYVPTRT-----RKFYALPQSPQTFKQLLMVAGFQKYFQITKCFRDEDLRSDRQPEFT 226

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +     ++     N+++             Q +N +  +    ++  +A   Y 
Sbjct: 227 QVDIELSFADEIEIQTLIENLLKYVF---------KQTINVDLTTPFMRMSYEQAINDYG 277

Query: 179 NIDLGTTLD 187
           +       D
Sbjct: 278 SDKPDLRFD 286



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 49/153 (32%), Gaps = 7/153 (4%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +    A    ++  +   +  I    +     E    +                 ++   
Sbjct: 400 VRINLASILNLKKPNIFKFVWIIDWPLYEYDNEAQRFVAAHHPFTMPTLETLNTFDVNKK 459

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           D R  + +++     EL      ++D   QR  F+           E        L    
Sbjct: 460 DARG-RSYDIVLNGYELGGGSVRIIDQQIQRRMFKSINMS----DEEANLKFGFLLTAFE 514

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +P   GIA+G DRL+M++  +  I +V+  P
Sbjct: 515 YGVPPHCGIALGLDRLMMILVNSEYIRDVVAFP 547


>gi|325128778|gb|EGC51640.1| aspartyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 602

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 64/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +       +      D    
Sbjct: 245 IMDITEGMAKQVFKDALGVDLGGFPRMPYAEAMFYYGS--DKPDMRIGLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 48/171 (28%), Gaps = 5/171 (2%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +   D    ++      R  + L+          +     +    + E  E         
Sbjct: 398 FFGADKAKVVNEAIGALRIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVH 457

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P        +        + +++     E+      +     Q   F       K
Sbjct: 458 HPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVF----AALK 513

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 514 ISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|261391979|emb|CAX49443.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase; AspRS) [Neisseria
           meningitidis 8013]
          Length = 602

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 64/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +       +      D    
Sbjct: 245 IMDITEGMAKQVFKDALGVDLGGFPRMPYAEAMFYYGS--DKPDMRIGLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|325105721|ref|YP_004275375.1| aspartyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324974569|gb|ADY53553.1| aspartyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 582

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 72/231 (31%), Gaps = 14/231 (6%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR P    L+ R+ +   +R+Y     FIE+++  L   +P      R F     +   
Sbjct: 131 LRRNPVRSNLVLRHKMAQEIRKYLDSQDFIEVETPYLIKSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E
Sbjct: 186 -PGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFIEQE 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     + R   +       +        + E   +  ++       ++     +   
Sbjct: 245 DILNLFEGLTRHMFKTVKGLDIAEFPR--MSYDEAMRLYGSDKPDTRFGMEFVDITEIGK 302

Query: 191 QPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILDR 240
                +        GI               +      P +G      +  
Sbjct: 303 GKGFPVFDNADIAIGINAKASASYTRKQLDELTDFIKRPQIGATGMIYMRH 353



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 46/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R  +      +    L+E  E     +        P PE         
Sbjct: 404 ELRLEMGNRLGLRDRNKFAPLWVVDFPLLEWDEETARYHAMHHPFTSPKPEDIAKLDTDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  ++L     E+      + +   Q   F      K   +   E        +  
Sbjct: 464 GAVRANAYDLVINGTEIGGGSIRIHNRELQSLMF------KHLGFTPEEAQKQFGFLMDA 517

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P   GIA GFDRLV +  G + I +VI  P
Sbjct: 518 FEYGAPPHGGIAFGFDRLVSIFAGLDTIRDVIAFP 552


>gi|118580744|ref|YP_901994.1| aspartyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118503454|gb|ABK99936.1| aspartyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 594

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 38/127 (29%), Gaps = 6/127 (4%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +L    E              P  E              K ++L     E+      +  
Sbjct: 440 LLEWDDEDKRWAAVHHPFTA-PMDEDLPLLESDPGRCRAKAYDLVLNGNEIGGGSIRIHQ 498

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
              Q   FE                    L  L    P   GIA G DRL+ML+TG+ +I
Sbjct: 499 EQVQSRMFE----LLGMSDESARSKFGFLLDALEFGTPPHGGIAFGLDRLIMLMTGSESI 554

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 555 RDVIAFP 561



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 71/202 (35%), Gaps = 9/202 (4%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      + +  L+ R+ +    R Y  +N F+E+++  L   +P      R F   
Sbjct: 133 KHRYLDLRRPQLQQNLILRSKVSQLTRSYLTDNGFLEMETPFLTKSTPEG---ARDFLVP 189

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
             I    +   Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   
Sbjct: 190 SRIN---QGSFYALPQSPQIFKQILMISGFDRYFQVVRCFRDEDLRADRQPEFTQIDCEM 246

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    E ++     +I    + A          +           V     R+  ++L  
Sbjct: 247 SFIDREDIIAVMEGLIATVFKQAKGVDVQLPIQHITYDEAIRRFGVDNPDLRF-GMELCQ 305

Query: 185 TLDNPDQPDRHLLYLQAQQAGI 206
             D        +    A + GI
Sbjct: 306 LTDIVKGSGFKVFADTAAKGGI 327


>gi|257466069|ref|ZP_05630380.1| aspartyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917225|ref|ZP_07913465.1| aspartyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691100|gb|EFS27935.1| aspartyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 594

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 78/230 (33%), Gaps = 20/230 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ +  ++R Y  +  F+++D+  L   +P      R F     I    
Sbjct: 135 RRPKMIQNLKMRHRMIMAIRNYMDQAGFLDVDTPILTKSTPEG---ARDFLVPSRIN--- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +  + + 
Sbjct: 189 GGTFYALPQSPQIFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDVEMSFVTQDD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           E +  A A   Y +          + 
Sbjct: 249 VMNEIEGLAKYVFKNVTGEEANYT---------FERMPYAIAMGEYGS---DKPDLRFEV 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             + L  + A+ +    +       I   I+  K             + Y
Sbjct: 297 KLKDLSDVVAKSSFKAFSATVENGGIVKAIVAPKAFEKFSRKVLGEYEDY 346



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 6/147 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN-CCTILDRYPAPESALANIYPADPRFTK 260
           ++ G+   +   +  +    + E  E                  +         D   T 
Sbjct: 418 KELGLIDMNSYKFLWVVDFPMFEYDEEEGRYKAEHHPFTSIKEEDMEKFLAGQTDNIRTN 477

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            ++L     E+      + +   Q   FE+          E       FL       P  
Sbjct: 478 TYDLVLNGSEIGGGSIRISNTELQAKVFERLSLS----PEEAKEKFGFFLDAFKYGAPPH 533

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            G+A G DR +M++    +I +VI  P
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFP 560


>gi|254805506|ref|YP_003083727.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254669048|emb|CBA07519.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 602

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 64/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +       +      D    
Sbjct: 245 IMDITEGMAKQVFKDALGVDLGGFPRMPYAEAMFYYGS--DKPDMRIGLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 48/171 (28%), Gaps = 5/171 (2%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +   D    ++      R  + L+          +     +    + E  E         
Sbjct: 398 FFGADKAKVVNEAIGALRIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVH 457

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P        +        + +++     E+      +     Q   F       K
Sbjct: 458 HPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVF----AALK 513

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 514 ISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|152979848|ref|YP_001354789.1| aspartyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|151279925|gb|ABR88335.1| Aspartyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 601

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 47/146 (32%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +++G+    +     +    + E  E N   +        P                 K 
Sbjct: 424 KKSGL-FDDEWRPLWVVDFPMFEFDEENQRWSATHHPFTAPKDGHEDLMETDPGKCIAKA 482

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   F    +  K    E        L  L    P   
Sbjct: 483 YDMVLNGWELGGGSVRIHRADVQSKVF----RALKIGAEEAQLKFGFLLDALQYGAPPHG 538

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR+V ++TGA +I +VI  P
Sbjct: 539 GLAFGLDRIVTMMTGAESIRDVIAFP 564



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 51/130 (39%), Gaps = 8/130 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R++     FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQNNLRLRYKVTMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVPSRVNAGHFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 193 LPQ------SPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFMNEQE 246

Query: 132 LMKDCMNIIR 141
           +      +IR
Sbjct: 247 IRDLFEGMIR 256


>gi|332971843|gb|EGK10789.1| aspartate--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 602

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQKNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHAGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      ++      D    
Sbjct: 245 IMDITEGMAKQVFKDALGVDLGDFPRMAYWDAMFNYGS--DKPDMRISLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 45/156 (28%), Gaps = 8/156 (5%)

Query: 195 HLLYLQAQQAGIR---VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
            L     ++ G+       +     +    + E  E              P         
Sbjct: 413 ALRIKIGKEHGLENGYFVDEWKPLWVVDFPMFEYDEEADRYVAVHHPFTAPKEGHVGLMT 472

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              +    + +++     E+      +     Q   F       K    E        L 
Sbjct: 473 SDPEKCLARAYDMVLNGWEIGGGSIRIHRADMQEKVF----AALKISPEEQQEKFGFLLD 528

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 529 NLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|254672563|emb|CBA06197.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 602

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 64/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +       +      D    
Sbjct: 245 IMDITEGMAKQVFKDALGVDLGGFPRMPYAEAMFYYGS--DKPDMRIGLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|195978983|ref|YP_002124227.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|238689789|sp|B4U0K5|SYD_STREM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|195975688|gb|ACG63214.1| aspartyl-tRNA synthetase AspS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 582

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 48/148 (32%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +       +  +    + E  E              P  ESA            
Sbjct: 407 IAKELDMIDMSQFHFLWVVDWPMFEWSEEEERYMSAHHPFTLPTQESAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
             +++     EL      +     Q   F+     K+    E        L  +    P 
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKDMQERMFKALGFTKE----EASDQFGFLLEAMEYGFPP 522

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A+G DRLVML+ G +NI EVI  P
Sbjct: 523 HGGLAIGLDRLVMLLAGKDNIREVIAFP 550



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 68/225 (30%), Gaps = 19/225 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R      +R Y     FI++++  L   +P     ++ 
Sbjct: 122 DMRLRYRYLDLRRPEMLESFKLRAKTTHVIRNYLDNLGFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRISQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +                     +    +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMIAKVMKDTKGIEVKLPFPRMAYDDAMNHYGSDKPDTRFDML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T    +   +     QA +   ++   DD       ++   
Sbjct: 296 LQDLTDLVKEVDFKVFSEAQAVKAIVVKGHADDYSRKDIDKLTEF 340


>gi|188577440|ref|YP_001914369.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|238689554|sp|B2STK7|SYD_XANOP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188521892|gb|ACD59837.1| aspartyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 588

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 78/229 (34%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 110 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEG---ARDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     +++R   +           V+ +  ++   +
Sbjct: 224 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMMRAIFKEV---------VDVDLAAQFPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  RY   D        +  D   L   ++      A +D    +
Sbjct: 275 TWAEAMRRY-GSDKPDLRIALELVDVAELVKSSEFPVFTAAANDADGRV 322



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    VA       +    + E  +              PA +        A 
Sbjct: 408 ALRLKAGKEFDLVAEGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANAR 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 468 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 524 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 555


>gi|78355059|ref|YP_386508.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|97196665|sp|Q317R3|SYD_DESDG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78217464|gb|ABB36813.1| aspartyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 606

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R       R+    ++R Y  +  F+E+++  L   +P      R F     +    
Sbjct: 155 RRPRLARNFQLRHRATQAIRNYLDQLNFLEVETPYLTKSTPEG---ARDFLVPSRMN--- 208

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    E+
Sbjct: 209 QGEFYALPQSPQIFKQLLMVAGMDRYYQIVRCFRDEDLRADRQPEFTQVDIEMSFVDEER 268

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +              +       +   +A A Y  +D   T  +   
Sbjct: 269 VQSMAEGLMARVFKETLG---------IDVALPFPRMPYDQAIAEY-GLDKPDTRFDLRL 318

Query: 192 PD 193
            D
Sbjct: 319 KD 320



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 42/129 (32%), Gaps = 10/129 (7%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +     E    + C       P        +        + ++L     E+      +  
Sbjct: 451 LFEYSPEDKRYVACHHPFTA-PQVGHEELMVSDPAKARARAYDLVLNGNEVGGGSIRIHS 509

Query: 281 PIEQRHRFEKEMQEKKKIYN--ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
              Q H F      +   ++  E        +  L    P   GIA G DRLVML+ G+ 
Sbjct: 510 REAQEHMF------RALGFDPQEAEEQFGFLMQALELGAPPHGGIAFGMDRLVMLLAGSA 563

Query: 338 NINEVIWTP 346
           +I +VI  P
Sbjct: 564 SIRDVIAFP 572


>gi|330935893|ref|XP_003305169.1| hypothetical protein PTT_17935 [Pyrenophora teres f. teres 0-1]
 gi|311317926|gb|EFQ86725.1| hypothetical protein PTT_17935 [Pyrenophora teres f. teres 0-1]
          Length = 575

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/354 (11%), Positives = 108/354 (30%), Gaps = 51/354 (14%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRA 61
           +  +    R     +   ++ R+ ++ +  + + E +  ++   +L      G  T    
Sbjct: 256 LDLRHLTLRGETASK--VMIVRDAVEFAFNQVYKEMRLRKVSPPALVQTQVEGGAT---- 309

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTML 120
               L    +  +  YL  S +   +  L +    ++C   ++R  +     H  E+T +
Sbjct: 310 ----LFKFGYYNEEAYLTQSSQLYLETCLPS-MGDVYCIEKSFRAEKSLTRRHLAEYTHI 364

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           E    + +++ L+     ++                           +T+A+   +   +
Sbjct: 365 EAELDYINFDDLLIHLEEVM----------------------CRVLEVTMADPVVKQYIM 402

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRV------AHDDTWSDIFSRILIEKIEPNLGINC 234
           DL      P++P + + Y  A    +             + D  +     ++     IN 
Sbjct: 403 DLNPEFQLPERPFKRMKYQDAIDWLVEHNIPNEDGEPHKFGDDIAEAAERRM--TDIINR 460

Query: 235 CTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              L  +P    +        D R T+  +     +         +D  ++         
Sbjct: 461 PIFLTHFPTEIKAFYMLKDKDDARVTESVDCLMPGVGEIVGGSMRMDNYDEL----MAAF 516

Query: 294 EKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +++I    Y    D            G  +G +R +  +   + + +    P 
Sbjct: 517 AREQIDPAAYYWYTD--QRKYGSSPHGGYGLGLERFLAWLCKQHTVRDCCLYPR 568


>gi|295108483|emb|CBL22436.1| aspartyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 598

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 67/191 (35%), Gaps = 20/191 (10%)

Query: 14  FHYR-RRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQD 70
                +R  +LK + +    R++F E  F+EI++  L + +P     ++           
Sbjct: 141 RRPDLQRNIMLK-SKVAQLTRKFFTEEGFLEIETPMLGKSTPEGARDYLVPSRIHPGSFY 199

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    +
Sbjct: 200 GLPQ------SPQLYKQLLMCSGYDRYIQIARCFRDEDLRADRQPEFTQIDMELSFVDVD 253

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++      +    +            + +     + IT  EA  R+   D        +
Sbjct: 254 DVIDVNERFLAYLFKEVL---------DVDVKLPIQRITWQEAMDRF-GSDKPDMRFGME 303

Query: 191 QPDRHLLYLQA 201
             D   +    
Sbjct: 304 LHDVSEVVKDC 314



 Score = 91.6 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 6/157 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
            L    A+Q  +   ++  +  +    +L    E N               +  L     
Sbjct: 415 ALRVELAKQMDLLDKNEYRFVWVTEFPLLEWNEEENRYTAMHHPFTMLMDEDIPLIESGD 474

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                 K +++     E+      +     Q   FE     ++      Y      L   
Sbjct: 475 LGKIRAKAYDIVLNGNEIGGGSVRIHQNDIQEKMFEMLGFTREA----AYEQFGFLLNAF 530

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 531 KYGVPPHAGLAYGLDRLVMLMAKVDSIRDVIAFPKVK 567


>gi|89900091|ref|YP_522562.1| aspartyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|123279048|sp|Q21YX2|SYD_RHOFD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|89344828|gb|ABD69031.1| aspartyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 611

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 56/204 (27%), Gaps = 6/204 (2%)

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR-HLLYLQAQQ 203
               Q        +             +    +   D    +++     R  + + +  +
Sbjct: 375 WPGLQSPIVKNIHDKAIAEVLARTGAQDGDLIFFGADKAKIVNDAIGALRIKIGHSEFGK 434

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
                        +    + E  E              P        +   +   ++ ++
Sbjct: 435 KNALFEKSWRPMWVVDFPMFEFDEEAQRYTAVHHPFTAPKEGHEDWMVTAPEKCISQGYD 494

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
           +     E+      +     Q+  F+      K    E        L  L    P   G+
Sbjct: 495 MVLNGWEMGGGSVRIHRADVQQKVFD----ALKISPEEAQDKFGFLLDALQYGAPPHGGL 550

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DR++ L+TGA +I +VI  P
Sbjct: 551 AFGLDRIITLMTGAESIRDVIAFP 574



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 68/197 (34%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +   +R++   N F++I++  L + +P     ++            
Sbjct: 133 RRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLGKSTPEGARDYLVPSRVHEGHFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  S + 
Sbjct: 193 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFLSEQD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +                +SE  +   ++       ++     D    
Sbjct: 247 IRDLFQEMITTVFKT--TLNVDLGEFPVMAYSEAMHRYGSDKPDLRVKLEFTELTDVMTD 304

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A   G RV
Sbjct: 305 VDFKVFSGAATMKGGRV 321


>gi|307705772|ref|ZP_07642617.1| aspartyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307620690|gb|EFN99781.1| aspartyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDGDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|315612036|ref|ZP_07886953.1| aspartate--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315838|gb|EFU63873.1| aspartate--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSTEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLSEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|262039241|ref|ZP_06012559.1| aspartate--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746735|gb|EEY34256.1| aspartate--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 591

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 70/190 (36%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++KRN +  S+R++  EN F+++D+  L   +P      R F     I    
Sbjct: 133 RRPKMLNNIIKRNDMLFSIRKFMNENGFLDVDTPILAKATPEG---ARDFVVPSRIN--- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ AG +K +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 187 KGDFYALPQSPQLFKQILMVAGIDKYYQLAKCFRDEDLRADRQPEFTQLDVEMSFVEQED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   E    +  +            E +T  +A   Y   D      +   
Sbjct: 247 VLNVMEKLAKKVFEDVTGEKVTET---------FERMTYDDAMNNY-GSDKPDLRFDMKL 296

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 297 IDLSKEVENC 306



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 45/149 (30%), Gaps = 5/149 (3%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           I          +   +     E N               +    +    D   T  +++ 
Sbjct: 420 IDKDAYKFLWVVDFPMFEWSEEENRYKAQHHPFTSIKVEDRKYLDTNELDKIKTDSYDMV 479

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAM 324
               E+      + D   Q   FEK          E       FL  L   +P   G+A 
Sbjct: 480 LNGYEIGGGSIRIHDEELQEKVFEKLGL----GKEEQQEKFGFFLEVLKYGVPPHGGLAF 535

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G DR +M +   N+I EVI  P +   Q+
Sbjct: 536 GIDRWLMAMLKENSIKEVIPFPKTNKGQD 564


>gi|212543239|ref|XP_002151774.1| asparaginyl-tRNA synthetase Slm5, putative [Penicillium marneffei
           ATCC 18224]
 gi|210066681|gb|EEA20774.1| asparaginyl-tRNA synthetase Slm5, putative [Penicillium marneffei
           ATCC 18224]
          Length = 560

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 59/413 (14%), Positives = 112/413 (27%), Gaps = 77/413 (18%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFV---ENQFIEIDSMSLQYS 52
           + QIP         H R R          R+     L + F    +  FI++    +  S
Sbjct: 152 LRQIP---------HLRLRTPFSSLLARFRSETIYQLGQVFRSVPQGGFIQVQPPLITSS 202

Query: 53  ---PGNETH-IRAFST-----------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKI 97
                 ET  +   S+           EL      R P YL  S +   +   AA    +
Sbjct: 203 DCEGAGETFTLSPQSSGLPLDSPKGSEELEYLHFFRNPKYLTVSSQLHLEAY-AAELGNV 261

Query: 98  FCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI-IRCAAEVANQKIFSFQ 155
           +  +  +R  +     H  EF MLE      +    + D +   IR  A        + +
Sbjct: 262 WTLSPTFRAEKSKTPRHLSEFYMLEAEVNFTNELPALLDLVEYLIRDLARRLYDTPVAQE 321

Query: 156 NVNCNPFSEPEYITVAE------AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
            ++     E    +  +              +  +           +L       G    
Sbjct: 322 VLSAKRTGESGLDSSDDVQGILRRRWEVLLSETISWPRITYTQAIEMLQDAQANHGASFV 381

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI--------YPADPRFTKR 261
           +  +WS+       + I   +       +  YP                 +P        
Sbjct: 382 YPPSWSEGLQTEHEKYIVDTIFNGVPVFVTDYPQKVKPFYMAPSEGADAGHPDQATVACF 441

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED---FLACLT---- 314
             L+    E+           E   +  +    K +    +  +D++    +  L+    
Sbjct: 442 DLLFPEICEVVGGSLREHRLAELISKMREYGLIK-QGPQSSKLMDDNENEHILALSKNYP 500

Query: 315 --------------------EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                                     G  +GFDRL+  + G  ++ +V+  P 
Sbjct: 501 YLQPGETLGHLQWYADLRRWGSAPHGGFGLGFDRLLGYLAGVGSLRDVVPFPR 553


>gi|168484062|ref|ZP_02709014.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172042695|gb|EDT50741.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|332198725|gb|EGJ12807.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 77/233 (33%), Gaps = 37/233 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +              +   ++ A Y + 
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVT---------LPFPRMKYDDSMALYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLY----------LQAQQAGIRVAHDDTWSDIFSRILI 223
              T  D   Q    ++           L  +   ++ A D+       ++  
Sbjct: 287 KPDTRFDMLLQDLTEVVKGVDFKVFSEALAVKAIVVKGAADNYSRKDIDKMTE 339


>gi|149002950|ref|ZP_01827861.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|149023814|ref|ZP_01836275.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|237649537|ref|ZP_04523789.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822669|ref|ZP_04598514.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758953|gb|EDK65948.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147929610|gb|EDK80603.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 77/233 (33%), Gaps = 37/233 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +              +   +A A Y + 
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVT---------LPFPRMKYDDAMALYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLY----------LQAQQAGIRVAHDDTWSDIFSRILI 223
              T  D   Q    ++           L  +   ++ A D+       ++  
Sbjct: 287 KPDTRFDMLLQDLTEVVKGVDFKVFSEALAVKAIVVKGAADNYSRKDIDKMTE 339


>gi|33591895|ref|NP_879539.1| aspartyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33594835|ref|NP_882478.1| aspartyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|33599107|ref|NP_886667.1| aspartyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|46577213|sp|Q7W001|SYD_BORPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46577214|sp|Q7W275|SYD_BORPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46577217|sp|Q7WR42|SYD_BORBR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33564911|emb|CAE39856.1| aspartyl-tRNA synthetase [Bordetella parapertussis]
 gi|33571539|emb|CAE41019.1| aspartyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|33575153|emb|CAE30616.1| aspartyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|332381312|gb|AEE66159.1| aspartyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 596

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 69/182 (37%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R  +   +R+Y  +  FI+I++  L   +P     ++            
Sbjct: 131 RRPQMQHNLMLRYRVSIEVRKYLDQLGFIDIETPMLTKSTPEGARDYLVPSRVNAGYFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEVE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +IR   +V           + +  +    ++  EA  RY   D      N + 
Sbjct: 245 IREIFEGMIRHVFKVV---------QDVDLPTPFPIMSWTEAMQRY-GSDKPDLRVNLEF 294

Query: 192 PD 193
            D
Sbjct: 295 TD 296



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 44/146 (30%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++AG+  +       +    + E  E              P                 K 
Sbjct: 422 KKAGL-FSGGWKPLWVVDFPMFEYDEEENRYTAAHHPFTSPKDGHEDFLESDPGKAVAKA 480

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     E+      +     Q   F     + +    E        L  L    P   
Sbjct: 481 YDMVLNGWEIGGGSVRIHREEVQSKVFRALKIDAE----EAREKFGFLLDALQYGAPPHG 536

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DR++ ++ GA +I +VI  P
Sbjct: 537 GIAFGLDRIITMMAGAESIRDVIAFP 562


>gi|332198927|gb|EGJ13008.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSTEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEKEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|58260596|ref|XP_567708.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57229789|gb|AAW46191.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 693

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 11/164 (6%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL-DRYPAPESALANIYPADPR 257
           L A+                  +     E  + ++        +P       ++      
Sbjct: 508 LVAKGLMTLPTQPHFLWITQFPLFTLADEDKIHLSRGRYSSTHHPFTAPMYEDLADLKAG 567

Query: 258 FTK-----RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
                    ++L     E+      + D   Q    ++ +Q       +     +  L  
Sbjct: 568 KIDGVRGQHYDLVLDGQEIGGGSVRIHDARLQEWVMKEVLQL----DEQEMGRFDHLLRA 623

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
           L    P   G+A+GFDRLV ++ GA +I +VI  P S + Q+ +
Sbjct: 624 LKCGAPPHGGLALGFDRLVAILCGAKSIRDVIAFPKSTTGQDPV 667



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 70/219 (31%), Gaps = 9/219 (4%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNET-HIRAFSTELIIQD 70
            RR+     L  R+ +   +R Y  +  F EI++   L  SP      +    T     +
Sbjct: 200 LRRQDLADNLKTRSKVAHIIRNYLHDQGFTEIETPILLNSSPEGAREFLVP--TRSPTPE 257

Query: 71  HIRKPLY-LQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
             +   Y L  SP+   + L+ +    K +  A  +R+ +     QPEFT ++      S
Sbjct: 258 GGQPTFYALPQSPQQPKQLLVSSGAIPKYYQIAKCFRDEDGRRDRQPEFTQIDLEMGFVS 317

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
                      +R    +  Q++            +       E + R    ++   +  
Sbjct: 318 GAAEQPKGEGEMRSTWAIGGQEVREVVEGMIKKIWKEVKGVDLEGWFRVMPYEVAMDVYG 377

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            D+PD                 DD+   +        +E
Sbjct: 378 SDKPDTRFDMYTLPIGYYPTLSDDSLDKVLLDQNPYTVE 416


>gi|293364654|ref|ZP_06611375.1| aspartate--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702912|ref|ZP_07639860.1| aspartyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316912|gb|EFE57344.1| aspartate--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623592|gb|EFO02581.1| aspartyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|254449028|ref|ZP_05062482.1| aspartyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261422|gb|EDY85713.1| aspartyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 592

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 65/192 (33%), Gaps = 17/192 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   LR +   N+F+++++  L   +P     ++            
Sbjct: 132 RRPQMQERLRLRAKVSHFLRNFLEHNEFLDLETPMLTRATPEGARDYLVPSRVHPGEFFA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT L+   +    E 
Sbjct: 192 LPQ------SPQLFKQLLMMSGMDRYYQIVRCFRDEDLRADRQPEFTQLDIEMSFIDEED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++    +                    E +  AEA  R+ +      +D    
Sbjct: 246 IMGLMEQMMVGLFKETMGVDLPAS---------FERMPYAEAMERFGSDKPDLRIDLELI 296

Query: 192 PDRHLLYLQAQQ 203
               L+     +
Sbjct: 297 SITDLMKDVEFK 308



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 11/147 (7%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           +     +  +    + E  +     +        P  +S  A    A+   ++ ++L   
Sbjct: 423 IQAGWRFLWVVDFPMFEYDDKEGRYHALHHPFTAPLVDSPAALKDDAENALSRAYDLVLN 482

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQSSGIA 323
             EL      +  P       E +      +  +    +E F   L+ L    P   GIA
Sbjct: 483 GTELGGGSIRIHTP-------EMQQAALDALGIDEQEAEEKFGFLLSALKYGCPPHGGIA 535

Query: 324 MGFDRLVMLVTGANNINEVIWTPFSQS 350
            G DR+VML++GA++I +V+  P +QS
Sbjct: 536 FGLDRMVMLLSGASSIRDVMAFPKTQS 562


>gi|148984412|ref|ZP_01817700.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|148998089|ref|ZP_01825602.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168575984|ref|ZP_02721889.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|194398266|ref|YP_002038702.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|307068730|ref|YP_003877696.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|238690808|sp|B5E3C1|SYD_STRP4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|147756099|gb|EDK63142.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147923189|gb|EDK74303.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|183578094|gb|EDT98622.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|194357933|gb|ACF56381.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|301800860|emb|CBW33517.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|306410267|gb|ADM85694.1| Aspartyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 77/233 (33%), Gaps = 37/233 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +              +   +A A Y + 
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVT---------LPFPRMKYDDAMALYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLY----------LQAQQAGIRVAHDDTWSDIFSRILI 223
              T  D   Q    ++           L  +   ++ A D+       ++  
Sbjct: 287 KPDTRFDMLLQDLTEVVKGVDFKVFSEALAVKAIVVKGAADNYSRKDIDKMTE 339


>gi|148270483|ref|YP_001244943.1| aspartyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|147736027|gb|ABQ47367.1| aspartyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 579

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 65/182 (35%), Gaps = 16/182 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R +  ++ R  +   +R+YF E  F+EI++  L   +P      R F     +    
Sbjct: 130 RSERMKRNIILRYKVSKIIRDYFDELGFLEIETPFLTRSTPEG---ARDFLVPSRL--RP 184

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E +
Sbjct: 185 GKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQPEFTQVDVEMSFVDVEDV 244

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     +I      +                  + IT  EA  +Y   D        +  
Sbjct: 245 LNVSERMISRVFRESLGVDLE---------VPFDRITYDEAMEKY-GTDKPDRRFGMELR 294

Query: 193 DR 194
           D 
Sbjct: 295 DF 296



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 42/146 (28%), Gaps = 6/146 (4%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKR 261
           + G               ++              +   +P     L  +         K 
Sbjct: 407 EIGKERFSHLARGFDVLWVVDFPYFEWSEEEERFVARHHPFTMPVLETLGDDYTKVRAKA 466

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           ++L     E+      +     Q   F    +       E       FL      +P   
Sbjct: 467 YDLVINGYEVGGGSIRIHRRDIQEKIF----KLLGLSEEEAQKKFGFFLEAFRYGVPPHG 522

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DRLV ++ G ++I EVI  P
Sbjct: 523 GIAFGLDRLVSIIAGESSIREVIAFP 548


>gi|332071383|gb|EGI81877.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 74/222 (33%), Gaps = 27/222 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R  +  S+R Y  E +FI++++  L   +P     ++            
Sbjct: 133 RRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLVPSRVNKGHFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 193 LPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETSFLTEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +       +              +   +A A Y +    T  D   Q
Sbjct: 247 IQDITEGLIARVMKETKGIEVT---------LPFPRMKYDDAMALYGSDKPDTRFDMLLQ 297

Query: 192 PDRHLLY----------LQAQQAGIRVAHDDTWSDIFSRILI 223
               ++           L  +   ++ A D+       ++  
Sbjct: 298 DLTEVVKGVDFKVFSEALAVKAIVVKGAADNYSRKDIDKMTE 339


>gi|227538291|ref|ZP_03968340.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241806|gb|EEI91821.1| aspartate--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 11/139 (7%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L+ R+ +   +R Y  E  F+E+++  L   +P      R F     +   
Sbjct: 131 LRRNPVRQNLILRHKLAQEIRRYLDEQNFLEVETPVLIKSTPEG---ARDFVVPSRMNAG 187

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E
Sbjct: 188 ---EFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQE 244

Query: 131 QLMKDCMNIIRCAAEVANQ 149
            ++     + +   +    
Sbjct: 245 DILNMFEGLAKHLFKTVKG 263



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 49/158 (31%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    L+E  E +   +        P PE         
Sbjct: 403 ELRLEVGNQLGLRDKNKFAPLWVLDFPLLEWDEESGRYHAMHHPFTSPKPEDIPLLDTNP 462

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                  ++      E+      + D   Q   F       ++ Q++     E +     
Sbjct: 463 GEVRANAYDFVLNGSEIGGGSIRIHDKELQSLMFRHLGFTPEDAQKQFGFLMEAFT---- 518

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   G+A GFDR+V +  G + I +VI  P
Sbjct: 519 -----YGAPPHGGLAFGFDRMVSVFAGLDTIRDVIAFP 551


>gi|194760025|ref|XP_001962242.1| GF15370 [Drosophila ananassae]
 gi|190615939|gb|EDV31463.1| GF15370 [Drosophila ananassae]
          Length = 1132

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 73/196 (37%), Gaps = 19/196 (9%)

Query: 17  RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRK 74
             +  L  R+ +   +REY +    F+E+++ +L + +PG       F        H   
Sbjct: 603 DMQHNLRLRSTVIMKMREYLINYLGFVEVETPTLFRRTPGGAQE---FVVPTRKAGHF-- 657

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
              L  SP+   + L++ G ++ F  A  +R+       QPEFT L+   +  + + +M+
Sbjct: 658 -YSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQPEFTQLDVELSFTNRDDIMQ 716

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
               ++R           S+        +    IT  EA  +Y  +D   T       + 
Sbjct: 717 LIEEVLRY----------SWPKDLPRLQTPFRRITYEEAMEKY-GVDKPDTRFGFLLNNI 765

Query: 195 HLLYLQAQQAGIRVAH 210
             +  +  +   +   
Sbjct: 766 TEIIEKCDEYKTKFED 781



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 60/207 (28%), Gaps = 38/207 (18%)

Query: 169  TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE- 227
             V E   ++   D+   +   ++ D     L     G +V        I        +E 
Sbjct: 825  DVQEKLGKFLGEDVAKEVT--EKFDLEENDLLFLGIGPKVETRTLLGRIRLDYRDFLLEN 882

Query: 228  ---PNLGINCCTILDRYPAPES------------ALANIYPADPRF------------TK 260
                         +  +P  E                  +  D               ++
Sbjct: 883  GRAKRHNDFRFLWIIDFPLFERNPETKQLESVHHPFTLPHADDLDNFATSCENMENIRSQ 942

Query: 261  RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
             ++L     E+      + D   Q    E+ ++         +      L+ L    P  
Sbjct: 943  AYDLVLNGQEVGGGSIRIHDRDMQHFILEQILKI-------PHDHLSHLLSALESGCPPH 995

Query: 320  SGIAMGFDRLVMLVTGANNINEVIWTP 346
             GIA+G DRL+ ++  A +I +VI  P
Sbjct: 996  GGIALGLDRLIAILCRARSIRDVIAFP 1022


>gi|158520687|ref|YP_001528557.1| aspartyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|226736534|sp|A8ZUR7|SYD_DESOH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|158509513|gb|ABW66480.1| aspartyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 597

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 49/149 (32%), Gaps = 11/149 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+   +   +  +      E  E              P            +   ++ 
Sbjct: 421 ERLGLVDKNRMCFLWVTDFPFFEYDETEKRYQAKHHPFTAPHEADMEHLHTDPEAVRSRA 480

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+      + +   Q   FE        +          F   L  L +  P
Sbjct: 481 YDLVLNGTEIGGGSIRIHNRQVQEKMFE-------ALGLAPEDYTAKFGFLLDALDSGAP 533

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              G+A GFDRLVML+ G ++I EVI  P
Sbjct: 534 PHGGMAFGFDRLVMLLCGESSIREVIAFP 562



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  LL R+    + RE+     F++I++  L   +P     ++            
Sbjct: 141 RRPAMQKNLLARHRAGMAAREFLNSQGFLDIETPFLTRNTPEGARDYLVPSRVNPGAFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQLFKQMLMVAGFDRYYQIVRCFRDEDLRADRQPEFTQIDLEMSFVGEED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     ++         +                 +T  +A A Y  +D      +   
Sbjct: 255 VMAIGEGLVANVVRQVTGEAVD---------LPFSRMTYDQAMADY-GLDKPDLRFDMKL 304

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 305 VDITDIAAGC 314


>gi|15644191|ref|NP_229240.1| aspartyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6919972|sp|Q9X1F4|SYD_THEMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|4982006|gb|AAD36510.1|AE001796_2 aspartyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 579

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 70/196 (35%), Gaps = 9/196 (4%)

Query: 11  NRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQ 69
            R    +R   L  R  I   +R+YF E  F+EI++  L   +P      R F     + 
Sbjct: 129 LRSERMKRNIILRYR--ISKIIRDYFDELGFLEIETPFLTRSTPEG---ARDFLVPSRL- 182

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
               K   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    
Sbjct: 183 -RPGKFYALPQSPQLFKQILMISGFDRYFQIVRCFRDEDLRADRQPEFTQVDVEMSFVDV 241

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E ++     ++    + ++                 E     +   RY  ++L       
Sbjct: 242 EDVLNVSEGMVSRVFKESSGIDLKVPFDRIPYDDAMEKYGTDKPDRRY-GMELRDFGYAF 300

Query: 190 DQPDRHLLYLQAQQAG 205
           +  +  ++     + G
Sbjct: 301 ETTEFKVIRNVLNEGG 316



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 47/193 (24%), Gaps = 8/193 (4%)

Query: 156 NVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
               +   E   I   E                        L     + G          
Sbjct: 362 PHLKHLEKEFRKIAETENMNE--GDVCLIAAHTDRNLLNEALGTLRLEIGKEHFSHLAKG 419

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNA 274
                ++              +   +P     L  +         K ++L     E+   
Sbjct: 420 FDVLWVVDFPYFEWSEEEERFVARHHPFTMPVLETLGDDYTKVRAKAYDLVINGYEVGGG 479

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLV 333
              +     Q   FE           E       FL      +P   GIA G DRLV ++
Sbjct: 480 SIRIHRRDIQEKIFE----LLGLSEEEAQKKFGFFLEAFRYGVPPHGGIAFGLDRLVSII 535

Query: 334 TGANNINEVIWTP 346
            G ++I EVI  P
Sbjct: 536 AGESSIREVIAFP 548


>gi|168494130|ref|ZP_02718273.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183575842|gb|EDT96370.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSTEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEKEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|306836216|ref|ZP_07469200.1| aspartate--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567937|gb|EFM43518.1| aspartate--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 608

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R+   L  R+    + R    ++ F EI++ +L   +P      R F     +    
Sbjct: 134 RRERQAKALRLRSAANRAARNVLDKHDFAEIETPTLTRSTPEG---ARDFLVPARL--KP 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 189 GSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 248

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     I++   ++    I +              +T A+A   Y +       D     
Sbjct: 249 IALGEEIVKELWKLIGYDIQT----------PIPRMTYADAMKYYGSDKPDLRFDIKIVE 298

Query: 193 DRHLLYL 199
                  
Sbjct: 299 CTEFFKD 305



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P+    + +  +P       +++     E+      +     Q+  FE         
Sbjct: 456 FTSPKPEWIDSFDENPGEATAYAYDIVCNGNEIGGGSIRIHQEDVQKRVFEVMGI----G 511

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 512 DEEAQEKFGFLLDAFSYGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 560


>gi|303254918|ref|ZP_07341002.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303259616|ref|ZP_07345592.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262061|ref|ZP_07348006.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303264518|ref|ZP_07350437.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303267190|ref|ZP_07353056.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303270036|ref|ZP_07355759.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|301802784|emb|CBW35558.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302598100|gb|EFL65162.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302636701|gb|EFL67191.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639168|gb|EFL69627.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302640430|gb|EFL70854.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643254|gb|EFL73535.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302645888|gb|EFL76116.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|332198535|gb|EGJ12618.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSTEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|134117039|ref|XP_772746.1| hypothetical protein CNBK1200 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255364|gb|EAL18099.1| hypothetical protein CNBK1200 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 693

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 11/164 (6%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL-DRYPAPESALANIYPADPR 257
           L A+                  +     E  + ++        +P       ++      
Sbjct: 508 LVAKGLMTLPTQPHFLWITQFPLFTLADEDKIHLSRGRYSSTHHPFTAPMYEDLADLKAG 567

Query: 258 FTK-----RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
                    ++L     E+      + D   Q    ++ +Q       +     +  L  
Sbjct: 568 KIDGVRGQHYDLVLDGQEIGGGSVRIHDARLQEWVMKEVLQL----DEQEMGRFDHLLRA 623

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
           L    P   G+A+GFDRLV ++ GA +I +VI  P S + Q+ +
Sbjct: 624 LKCGAPPHGGLALGFDRLVAILCGAKSIRDVIAFPKSTTGQDPV 667



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 70/219 (31%), Gaps = 9/219 (4%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNET-HIRAFSTELIIQD 70
            RR+     L  R+ +   +R Y  +  F EI++   L  SP      +    T     +
Sbjct: 200 LRRQDLADNLKTRSKVAHIIRNYLHDQGFTEIETPILLNSSPEGAREFLVP--TRSPTPE 257

Query: 71  HIRKPLY-LQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
             +   Y L  SP+   + L+ +    K +  A  +R+ +     QPEFT ++      S
Sbjct: 258 GGQPTFYALPQSPQQPKQLLVSSGAIPKYYQIAKCFRDEDGRRDRQPEFTQIDLEMGFVS 317

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
                      +R    +  Q++            +       E + R    ++   +  
Sbjct: 318 GAAEPPKGEGEMRSTWAIGGQEVRDVVEGMIKKIWKEVKGVDLEGWFRVMPYEVAMDVYG 377

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            D+PD                 DD+   +        +E
Sbjct: 378 SDKPDTRFDMYTLPIGYYPTLSDDSLDKVLLDQNPYTVE 416


>gi|332071188|gb|EGI81683.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSTEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 74/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +    +             +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPHMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|325281473|ref|YP_004254015.1| aspartyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313282|gb|ADY33835.1| aspartyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 581

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 17/181 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +    QF+E+++  L   +P      R F     +    
Sbjct: 132 RRQMVRRNLELRHRMAHLVRNFLDGKQFMEVETPVLIKSTPEG---ARDFVVPSRMN--Q 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTFKQLLMVAGFDRYYQIVKCFRDEDLRADRQPEFTQIDCEMSFVEREDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    ++IR   +                      +T  EA  +Y   D           
Sbjct: 247 LGIFEDMIRHLFKEIRGIDI----------PAFPRMTWHEAMEQY-GCDKPDIRFGMKFA 295

Query: 193 D 193
           D
Sbjct: 296 D 296



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 49/158 (31%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R  +      I    L+E  E              P PE         
Sbjct: 403 ELRLEMGNRLGLRDKNVFKPLWIVDFPLLEWDEETQRFYAMHHPFTSPNPEDIDLMETRP 462

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-----EMQEKKKIYNETYPIDEDF 309
                  +++    +E+      + D   Q+  F+      E  EK+             
Sbjct: 463 GDVRANAYDMVINGVEVGGGSIRIHDTALQQRMFKCLGFTPEQAEKQFG---------FL 513

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L       P   GIA GFDRLV +  G ++I + I  P
Sbjct: 514 LNAFKYGAPPHGGIAFGFDRLVSMFAGLDSIRDTIAFP 551


>gi|307710175|ref|ZP_07646619.1| aspartyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619155|gb|EFN98287.1| aspartyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 45/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+             
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTAVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|299067976|emb|CBJ39190.1| aspartate tRNA synthetase [Ralstonia solanacearum CMR15]
          Length = 607

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 66/197 (33%), Gaps = 9/197 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y  +  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 188 -GQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLTEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +         +                +   R   ++     D    
Sbjct: 247 IRDLFEEMIRTVFQNTMSVALDAKFPVMEFREAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A   G RV
Sbjct: 306 VDFKVFSSPANAEGGRV 322



 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 49/156 (31%), Gaps = 6/156 (3%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A+  G+          +    + E  E +            P  E             
Sbjct: 421 EFAKSTGL-FEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGKCI 479

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
            K +++     E+      +     Q   F    +  K    E        L  L    P
Sbjct: 480 AKAYDMVLNGWEIGGGSVRIYREEVQSKVF----RALKINDEEARAKFGFLLDALQYGAP 535

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              GIA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 536 PHGGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQD 571


>gi|289661892|ref|ZP_06483473.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 588

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 78/229 (34%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 110 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +     ++IR   +           V+ +  ++   +
Sbjct: 224 LRADRQLEFTQLDMEFAFVRERDVQDFVEDMIRAIFKEV---------VDVDLAAQFPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  R+   D        +  D   L   ++      A +D    +
Sbjct: 275 TWAEAMRRF-GSDKPDLRIALELVDVAELVKSSEFPVFTAAANDADGRV 322



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    +A       +    + E  +              PA +        A 
Sbjct: 408 ALRLKAGKEFNLLADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANAR 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 468 TAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 524 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 555


>gi|90411660|ref|ZP_01219670.1| aspartyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90327550|gb|EAS43903.1| aspartyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 597

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 64/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  EN F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDENAFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSAEQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +                      +   EA  R+   D     +  + 
Sbjct: 244 VRGMTEKMITEMWKELLNVDLGT----------FPIMPFEEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +             +D    +
Sbjct: 293 VDVADILKDVDFKVFSGPANDEKGRV 318



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 47/139 (33%), Gaps = 7/139 (5%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR--FELYACN 268
           D +       I     E +   N   +   + +P    A     +P       +++    
Sbjct: 421 DKSAWKPLWVIDFPMFEEDDEGNLHAMHHPFTSPLGITAEELAVNPAAANSNAYDMVING 480

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFD 327
            E+      + +   Q   F     E      E        L  L    P  +G+A G D
Sbjct: 481 YEVGGGSVRIHNAEMQSAVFSILGIE----EGEQQSKFGFLLEALKYGTPPHAGLAFGLD 536

Query: 328 RLVMLVTGANNINEVIWTP 346
           RLVML+ G +NI +VI  P
Sbjct: 537 RLVMLLCGTDNIRDVIAFP 555


>gi|323210668|gb|EFZ95546.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
          Length = 190

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 26/151 (17%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDR-------------YPAPESALANIYPADPRFTK 260
                S    +K  P   I+     D               P   +A       +     
Sbjct: 13  LGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVAN 72

Query: 261 RFELYACNIELCNACDELLDPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TE 315
            +++     E+      + +   Q+  F      E ++++K            L  L   
Sbjct: 73  AYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFG--------FLLDALKYG 124

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 125 TPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 155


>gi|304316702|ref|YP_003851847.1| aspartyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778204|gb|ADL68763.1| aspartyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 593

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 69/188 (36%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I   +R++  +N FI+I++  L   +P     ++     +      
Sbjct: 141 RRPSMQKILMTRYRITRIVRDFLDKNGFIDIETPLLIKSTPEGARDYLVPSRVQPGKFFA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A   R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIFKQLLMISGFDRYYQIAKCLRDEDLRADRQPEFTQIDMEMSFVEEDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I              + ++ +     + I+  EA  R+   D        + 
Sbjct: 255 VIALNEKMIA---------RIFKEILDIDLEVPFKRISWQEAMNRF-GSDKPDMRFGMEL 304

Query: 192 PDRHLLYL 199
            D   ++ 
Sbjct: 305 KDLSSIFA 312



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 54/163 (33%), Gaps = 17/163 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL     ++  +       +  +    L+E  E              P  E         
Sbjct: 415 HLRLEMGKRYNLIDESKYEFLWVVDFPLLEYSEEEKRFVAMHHPFTAPKDEDIEMLDKDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                K +++    +E+      + D   Q+  F+      ++ + +             
Sbjct: 475 GRVRAKAYDIVLNGLEIGGGSIRIHDTELQKKMFKVLGFTDEDAEARFG----------F 524

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
            L       P   GIA G DRL M++TG +NI +VI  P +Q+
Sbjct: 525 LLNAFKYGAPPHGGIAYGLDRLTMILTGTDNIRDVIAFPKTQN 567


>gi|168491642|ref|ZP_02715785.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|182685049|ref|YP_001836796.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|221232823|ref|YP_002511977.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225855603|ref|YP_002737115.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|238691140|sp|B2IN32|SYD_STRPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781754|sp|B8ZPN7|SYD_STRPJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781756|sp|C1CH44|SYD_STRZJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|182630383|gb|ACB91331.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|183574107|gb|EDT94635.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|220675285|emb|CAR69878.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722187|gb|ACO18040.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSTEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|119953236|ref|YP_945445.1| aspartyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254781718|sp|A1QZN3|SYD_BORT9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119862007|gb|AAX17775.1| aspartyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 585

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 77/228 (33%), Gaps = 8/228 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               ++  ++ R+ +  ++R Y  +  F+E+++ +    +P      R F     I    
Sbjct: 131 RREEQKQKIILRSKVTHTIRNYLTKKDFLELETPTFVKSTPEGA---RDFLVPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   +  + AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGHFYALPQSPQIYKQLTMIAGLDKYFQIARCYRDEDSRGDRQPEFTQLDIEMSFIKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N+I    +         +                +   RY  +           
Sbjct: 245 IFKLMENLIFTIFKNTLNISLPKKFKRMTYKHAMNTYGSDKPDTRYELLIQDMGKYFKQS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                  +   +  I+       +  FSR  I  +E +  I   + L 
Sbjct: 305 SFNVFKDILQNKGTIKALIIKNQAHNFSRSKINNLEEHAKIYKTSGLY 352



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A +  +   +   +  I+   L E  E          +   P  +         
Sbjct: 404 QIRIKIANELNLTNKNTFEFLWIYDFPLFEYDEDTKNYKAAHHMFSLPQQKYIDTLESNP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +EL +    +     Q+  F   +  K  I  E +     FL  L 
Sbjct: 464 SKVLGEVYDLVLNGMELGSGSIRVHTRELQQRIFNI-VGFKDTIAEERFG---FFLKALE 519

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+M++T +++I +VI  P
Sbjct: 520 YGAPIHGGIAIGIDRLLMIMTHSSSIKDVILFP 552


>gi|15903965|ref|NP_359515.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116516137|ref|YP_817329.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|32171536|sp|Q8CWN4|SYD_STRR6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|122277825|sp|Q04I59|SYD_STRP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|15459621|gb|AAL00726.1| Aspartyl-tRNA synthetase (aspartate-tRNA ligase) [Streptococcus
           pneumoniae R6]
 gi|116076713|gb|ABJ54433.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 77/233 (33%), Gaps = 37/233 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I              +  +         +   +A A Y + 
Sbjct: 236 DLETSFLTEQEIQDITEGLIA---------RVMKETKDIEVTLPFPRMKYDDAMALYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLY----------LQAQQAGIRVAHDDTWSDIFSRILI 223
              T  D   Q    ++           L  +   ++ A D+       ++  
Sbjct: 287 KPDTRFDMLLQDLTEVVKGVDFKVFSEALAVKAIVVKGAADNYSRKDIDKMTE 339


>gi|307243797|ref|ZP_07525928.1| aspartate--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492800|gb|EFM64822.1| aspartate--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 596

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 50/157 (31%), Gaps = 11/157 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A + G+   +      +    + E+ E N            P  E         
Sbjct: 412 QVRIAVADKLGLADPNQFNLLWVTEFPIFEEDEENGRFVAKHHPFTSPMDEDLDKLESAE 471

Query: 255 DPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFL 310
           +      K +++     E+      + +   Q+  F      K       E Y      +
Sbjct: 472 NKLELRAKAYDIVLNGYEVGGGSIRISNAEIQKKMF------KALGFTDEEAYNKFGFLI 525

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   GIA G DRLVML+ GA NI EVI  P
Sbjct: 526 DAFKFGTPPHGGIAFGLDRLVMLLAGAENIREVIAFP 562



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 68/190 (35%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R+ + + +R Y  +N F EI++  L   +P     ++            
Sbjct: 138 RKPKMQKNLMLRHKVANVVRNYLSDNDFCEIETPFLVKPTPEGARDYLVPSRVNEGKFYA 197

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +      
Sbjct: 198 LPQ------SPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEEND 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +++   +    +            +    +T A+A  +Y   D   T    + 
Sbjct: 252 VMTIMEGLVKDIFKKVLDRDIV---------TPFPRMTYADAMDKY-GSDKPDTRYGLEF 301

Query: 192 PDRHLLYLQA 201
            +   +    
Sbjct: 302 VNISNIVADC 311


>gi|269926066|ref|YP_003322689.1| aspartyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789726|gb|ACZ41867.1| aspartyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 603

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    L  R+ +   +R+Y     FIEI++  L   +P     ++            
Sbjct: 133 RRPKMLRNLQLRHKVTKFIRDYLTARDFIEIETPILIKSTPEGARDYLVPSRLYPGHFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ F  A  +R+ +     QPEFT L+   +  + E 
Sbjct: 193 LPQ------SPQQLKQLLMVAGVERYFQIARCFRDEDLRADRQPEFTQLDLEMSFVTQED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++   ++     E    K   ++          + I+  E++ +Y   D        + 
Sbjct: 247 ILQLTEDLFTSLTEELTDKKILYK--------PFKRISYEESWNKY-GTDKPDIRYGMEI 297

Query: 192 PD 193
            D
Sbjct: 298 SD 299



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 54/159 (33%), Gaps = 15/159 (9%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A + G+       ++ I    L E  E     +        P PE               
Sbjct: 418 AHELGLVDQDVIAYAFIVDPPLFEWNEDEGRWDPTHHPFTAPYPEDEPLLDSDPGKVRAM 477

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT 314
            +++     EL +    +     Q   FE      ++++++     + +           
Sbjct: 478 AYDIVCNGYELGSGSIRIHKRDLQAKIFEILNYTPEDIEQRFGPLLKAFE---------Y 528

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   GIA G DRLVM++    NI EVI  P +Q+  +
Sbjct: 529 GAPPHGGIAPGIDRLVMVLADEPNIREVIAFPKNQAGVD 567


>gi|169335837|ref|ZP_02863030.1| hypothetical protein ANASTE_02263 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258575|gb|EDS72541.1| hypothetical protein ANASTE_02263 [Anaerofustis stercorihominis DSM
           17244]
          Length = 585

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 5/152 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++A I++     +  + +  + E  E              P  E              
Sbjct: 409 IAKKAEIKMDEGFNFLWVTNFPMFEYDENEKRYKAMHHPFTAPMDEDLDKLESEPGEVRA 468

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           K ++L    +E+      +     Q+  F            E        L  L    P 
Sbjct: 469 KAYDLVVNGVEMGGGSIRIHSGEVQQKVF---NVLGFS-DEEAENKFGFLLKALKYGTPP 524

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             G+A G DR++ML+    NI +VI  P +Q+
Sbjct: 525 HGGLAFGLDRMIMLLVDTENIRDVIAFPKTQN 556



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 72/192 (37%), Gaps = 17/192 (8%)

Query: 13  DFHYRR-RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQD 70
           D    + +  L+ R    S +R +     F+EI++  L + +P      R F     I+ 
Sbjct: 127 DLRKDKIKNNLITRAKTCSVVRNFLDSEGFLEIETPFLGKPTPEGA---RDFLVPSRIRK 183

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
              K   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    +
Sbjct: 184 --GKFFGLPQSPQLFKQILMVSGMDRYYQIVKCFRDEDLRQDRQPEFTQIDLEMSFVDVD 241

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     ++         K    + ++ +  +    +  +EA  R+   D   T    +
Sbjct: 242 DVIDVNERLV---------KKVFKEIIDYDIEAPIMRMEFSEAMDRF-GSDKPDTRFGME 291

Query: 191 QPDRHLLYLQAQ 202
             D   L    +
Sbjct: 292 LFDLSDLLKDCK 303


>gi|160936536|ref|ZP_02083903.1| hypothetical protein CLOBOL_01426 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440327|gb|EDP18072.1| hypothetical protein CLOBOL_01426 [Clostridium bolteae ATCC
           BAA-613]
          Length = 596

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 68/196 (34%), Gaps = 18/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ + +  R +     F+EI++ +L   +P     ++            
Sbjct: 141 RRPDLQKNLMIRSQVATLTRAFLASEGFLEIETPTLIKSTPEGARDYLVPSRVHPGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMCSGYDRYFQLARCYRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++         K    +    +       +T  EA  R+   D        + 
Sbjct: 255 VLDVNERLL---------KKLFKEICGFDVQLPIPRMTWQEAMDRF-GSDKPDLRFGMEL 304

Query: 192 PDRHLLYLQAQQAGIR 207
            +   +    + A  +
Sbjct: 305 KNVSEVVKGCEFAVFK 320



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 54/156 (34%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  +    D  +  +    L+E  E              P  E         
Sbjct: 415 NLRLELARQLDLLKKDDFKFLWVTEFPLLEYSEEEDRYVAMHHPFTMPMDEDLQYIDSDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++    +E+      +     Q   FE      ++   +        L    
Sbjct: 475 GRVRAKAYDIVLNGVEMGGGSVRIHQADIQSKMFEVLGFTPERAGEQ----FGFLLEAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DR+VML+ GA++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRVVMLMVGADSIRDVIAFPKVK 566


>gi|15901929|ref|NP_346533.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111656894|ref|ZP_01407723.1| hypothetical protein SpneT_02001855 [Streptococcus pneumoniae
           TIGR4]
 gi|148992039|ref|ZP_01821813.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168489178|ref|ZP_02713377.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|24212415|sp|Q97ND6|SYD_STRPN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|14973626|gb|AAK76173.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147929088|gb|EDK80099.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183572297|gb|EDT92825.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332071549|gb|EGI82042.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSTEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 69/198 (34%), Gaps = 27/198 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++     ++I    +       +              +   +A A Y + 
Sbjct: 236 DLETSFLTEQEIQDITESLIARVMKETKGIEVT---------LPFPRMKYDDAMALYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLY 198
              T  D   Q    ++ 
Sbjct: 287 KPDTRFDMLLQDLTEVVR 304


>gi|149006915|ref|ZP_01830596.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|307128374|ref|YP_003880405.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|147761516|gb|EDK68481.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|306485436|gb|ADM92305.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 587

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 45/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+             
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSTEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKEAADNYSRKDIDKMTE 339


>gi|329906027|ref|ZP_08274328.1| Aspartyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327547359|gb|EGF32189.1| Aspartyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 601

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 68/184 (36%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R++   + FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQNNLRLRYKVTMEVRKFLDSHGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQPEFTQIDCETSFMNEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +IR   + A          + +  +    +  +E+   Y +   D+   L   
Sbjct: 247 IRDLFEGMIRLVFKNAL---------DIDLPNPFPVMPYSESMGLYGSDKPDMRVKLAFT 297

Query: 190 DQPD 193
           D  +
Sbjct: 298 DLTE 301



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 43/145 (29%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +             +    + E  E     +        P                 K +
Sbjct: 424 KKHDLFDDVWKPLWVVDFPMFEYDEEGDRWHAAHHPFTAPKDGHEDFLETDPGKCIAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     EL      +     Q   F    +  K   +E        L  L    P   G
Sbjct: 484 DMVLNGWELGGGSVRIHRAEVQSKVF----RAMKIDDDEAQLKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           +A G DR+V ++TGA++I +VI  P
Sbjct: 540 LAFGLDRIVTMMTGADSIRDVIAFP 564


>gi|319939805|ref|ZP_08014161.1| aspartyl-tRNA synthetase 1 [Streptococcus anginosus 1_2_62CV]
 gi|319811018|gb|EFW07333.1| aspartyl-tRNA synthetase 1 [Streptococcus anginosus 1_2_62CV]
          Length = 579

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 68/194 (35%), Gaps = 6/194 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++R+Y     F+E+++  L   +P      R F     +    
Sbjct: 131 RRGKMTENLKLRHQVTSTIRDYLNGKDFLEVETPYLTKSTPEGA---RDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S + +
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQVVRCFRDEDLRGDRQPEFTQVDMEMSFASEKDI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +      +           +   R+       T    D P
Sbjct: 246 RMLVEEMLKAVVKKTHGLELTEAFPTISYEEAMNRFGTDKPDTRFGLELKNLTNLCQDNP 305

Query: 193 DRHLLYLQAQQAGI 206
              L    A+   +
Sbjct: 306 SLLLKQAFARHEEL 319



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 55/155 (35%), Gaps = 12/155 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY-P 253
           HL    A+Q  +       +  +    L+E  E             +P  +    N    
Sbjct: 404 HLRLEIAKQLDLINQSRLDFLWVLDWPLLEWNEEQ----GRYQAMHHPFTQGIFENEQED 459

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE-DFLAC 312
                +  +++     E+      + D   Q   FE    EK     E Y  D   FL  
Sbjct: 460 LASIKSHAYDIVLNGYEIGGGSLRIHDRKSQEAMFELLGMEK-----EDYERDFGFFLEA 514

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 515 LDYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 549


>gi|86134611|ref|ZP_01053193.1| Aspartyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821474|gb|EAQ42621.1| Aspartyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 584

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/295 (15%), Positives = 89/295 (30%), Gaps = 19/295 (6%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R+Y  + +FIE+++  L   +P      R F     + +  
Sbjct: 133 RRNPVKDSLIFRHKVTMEVRKYLSDQEFIEVETPYLIKSTPEG---ARDFVVPSRMNE-- 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDI 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + R   +  N             F +   +   +       ++ G         
Sbjct: 248 LNIFEGLTRHLLKEING--VEVDKFPRMLFDDAMRLYGNDKPDIRFGMEFGELNAVTQHK 305

Query: 193 DRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILD-----RYPAPES 246
           D  +        GI V   +         I+     P +G              + +   
Sbjct: 306 DFKVFNDAELVIGIAVPGGNAYTRKEIDNIIKWVKRPQVGALGMIYCRVNEDGSFKSSVD 365

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
              N                    +C    E      Q      E+ E+  + + 
Sbjct: 366 KFYNQEDLAKWV--EVTGAKPGDLVCVLSGETNKVRAQMSALRMELAERLGLRDP 418



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 45/157 (28%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R         +    L+E  E     +        P P          
Sbjct: 404 ALRMELAERLGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDSKP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q    +     E + K +            +
Sbjct: 464 GEVKANAYDLVLNGNEIGGGSIRIHDKATQATMLKHLGFSEEEAKAQFG--------FLM 515

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   G+A G DRLV ++ G   I + I  P
Sbjct: 516 DAFEYGAPPHGGLAFGLDRLVAILGGQETIRDFIAFP 552


>gi|118462335|ref|YP_882629.1| aspartyl-tRNA synthetase [Mycobacterium avium 104]
 gi|166225363|sp|A0QI91|SYD_MYCA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118163622|gb|ABK64519.1| aspartyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 591

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 71/212 (33%), Gaps = 32/212 (15%)

Query: 3   QIP---SQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P    +P    +   + R            +  R+ + ++ RE    + F+EI++ ++
Sbjct: 106 PLPFQLDEPAG-EELRLKYRYLDLRRDAPAAAIRLRSKVNAAAREVLDRHDFVEIETPTI 164

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              +P      R F     +        Y L  SP+   + L+ AG E+ +  A  +R+ 
Sbjct: 165 TRSTPEG---ARDFLVPARLH---PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDE 218

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT L+   +    E ++     I+     +   +                 
Sbjct: 219 DFRADRQPEFTQLDMEMSFVDAEDVIAISEEILAALWALIGYE----------IPRPIPR 268

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I+ A+A ARY +                    
Sbjct: 269 ISYADAMARYGSDKPDLRFGLELVECSEFFKD 300



 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 13/93 (13%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT 314
              +++     E+      +     Q   F        + ++K            L   T
Sbjct: 471 ADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDNAEAREKFG--------FLLEAFT 522

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G+DR+  L++  ++I EVI  P
Sbjct: 523 FGAPPHGGIAFGWDRINALLSRVDSIREVIAFP 555


>gi|167040111|ref|YP_001663096.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914196|ref|ZP_07131512.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724569|ref|YP_003904320.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|238687551|sp|B0K0N5|SYD_THEPX RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166854351|gb|ABY92760.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300889131|gb|EFK84277.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581630|gb|ADN55029.1| aspartyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 592

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 70/196 (35%), Gaps = 18/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I   +R++  +N FIEI++  L   +P     ++            
Sbjct: 141 RRPSMQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYLVPSRIYPGKFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K +  A   R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQPEFTQIDIEMSFVEVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++K    +I    +              +     + ++  E+  R+   D        + 
Sbjct: 255 VLKINEKMIAEIFKETLG---------IDVPIPFKRLSYQESMERF-GTDKPDLRFGMEL 304

Query: 192 PDRHLLYLQAQQAGIR 207
            D   +  Q++    +
Sbjct: 305 KDLSDIVAQSEFNVFK 320



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL     ++  +   +   +  I    L+E  E              P  E         
Sbjct: 414 HLRLELGKRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K +++     E+      + D   Q+  F      E++  E+     E +     
Sbjct: 474 LKVRAKAYDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFK---- 529

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                   P   GIA G DRL M++TG++ I +VI  P +Q+
Sbjct: 530 -----YGAPPHGGIAYGLDRLAMIITGSDTIRDVIAFPKTQN 566


>gi|319639099|ref|ZP_07993856.1| aspartyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399677|gb|EFV80341.1| aspartyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 602

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPTMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALGVDLGDFPRMPYSETMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKAKVVNEAIGALRIKVGLEHGKDNGYFVDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|315222433|ref|ZP_07864334.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188457|gb|EFU22171.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 579

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 67/194 (34%), Gaps = 6/194 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++R+Y     F+E+++  L   +P      R F     +    
Sbjct: 131 RRSKMTENLKLRHQVTSTIRDYLNGKDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S + +
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQVVRCFRDEDLRGDRQPEFTQVDMEMSFASEKDI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +      +           +   R+       T    D  
Sbjct: 246 RMLVEEMLKAVVKKTHGLELTEAFPTISYEEAMNRFGTDKPDTRFGLELKNLTALCQDNS 305

Query: 193 DRHLLYLQAQQAGI 206
              L    A+   +
Sbjct: 306 SLLLKQAFARHEEL 319



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 55/155 (35%), Gaps = 12/155 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY-P 253
           HL    A+Q  +       +  +    L+E  E             +P  +    N    
Sbjct: 404 HLRLEIAKQLDLIDQSQLNFLWVLDWPLLEWNEEQ----GRYQAMHHPFTQGIFENEKED 459

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE-DFLAC 312
                +  +++     E+      + D   Q   FE    EK     E Y  D   FL  
Sbjct: 460 LASIKSHAYDIVLNGYEIGGGSLRIHDRKSQEAMFELLGMEK-----EDYERDFGFFLEA 514

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 515 LEYGFPPHGGLALGLDRLVMILVGEENIRQVIAFP 549


>gi|307265228|ref|ZP_07546787.1| aspartyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919850|gb|EFN50065.1| aspartyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 592

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 18/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I   +R++   N FIEI++  L   +P     ++            
Sbjct: 141 RRPSMQQNLMTRFKITKVVRDFLNRNGFIEIETPLLIKSTPEGARDYLVPSRIYPGKFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K +  A   R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQPEFTQIDIEMSFVEVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++K    +I    +              +     + ++  E+  R+   D        + 
Sbjct: 255 VLKINEKMIAEIFKETLG---------IDVPIPFKRLSYQESMERF-GTDKPDLRFGMEL 304

Query: 192 PDRHLLYLQAQQAGIR 207
            D   +  Q++    +
Sbjct: 305 KDLSDIVAQSEFNVFK 320



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL     ++  +   +   +  I    L+E  E              P  E         
Sbjct: 414 HLRLELGKRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K +++     E+      + D   Q+  F      E++  E+     E +     
Sbjct: 474 LKVRAKAYDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFK---- 529

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                   P   GIA G DRL M++TG++ I +VI  P +Q+
Sbjct: 530 -----YGAPPHGGIAYGLDRLAMIITGSDTIRDVIAFPKTQN 566


>gi|301795040|emb|CBW37505.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 587

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 45/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+             
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSTEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKEAADNYSRKDIDKMTE 339


>gi|293363460|ref|ZP_06610217.1| aspartate--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552980|gb|EFF41733.1| aspartate--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 566

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 80/255 (31%), Gaps = 23/255 (9%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
           RRP     L+ +N +  ++RE+  EN F+E+++  L  + G     R F      +    
Sbjct: 123 RRPIMQKNLILKNKVFHAIREFMQENDFLEMETPIL--AKGTPEGARDFLVPTRNEGKF- 179

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
               L  SP+   + L+ +G E+ + FA  +R+ +     Q EF  L+   ++ S E   
Sbjct: 180 --FALPQSPQLFKQLLMVSGLERYYQFAKCFRDEDSRKDRQLEFIQLDIETSYLSVENFQ 237

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
                + +                        + +   +    Y   D      +    D
Sbjct: 238 AYIEKLFKYVMHKIG----------IEIKIPFQRLKYFDCIRDY-GTDKPDLRFDLKIQD 286

Query: 194 RHLLYLQAQQAGIRVAHDDT---WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
            +          I+ A          I  +   + I      N    L  +    S + +
Sbjct: 287 INEFCNSTDFNIIKNASSKRMLIIEQIIEKKTFKNISEIAKKNKVNALFYFAIENSKVIH 346

Query: 251 IYPADPRFTKRFELY 265
              A     +   L 
Sbjct: 347 SNFASKVQEEVDILI 361



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 19/152 (12%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINC-CTILDRYPAPESALANIYPADPRFTKRFELYACN 268
            +  +S I    + E +E             ++      +  +        K ++L    
Sbjct: 401 DEYNFSWITDWPMFEFVEEENRWQAAHHPFTQFDNDLEEVKTMDKEKI-MAKSYDLVFNG 459

Query: 269 IELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
            EL +    + +P+EQ   F      +K+ +EK             FL      +P   G
Sbjct: 460 FELGSGSARIYNPVEQELMFDMIGLDKKQQEEKFG----------WFLRAFKYGVPPHCG 509

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           I +G DRL+M++     I +VI  P +   Q+
Sbjct: 510 IGLGMDRLIMILANQKTIRDVIPFPKNSKGQD 541


>gi|88608344|ref|YP_506361.1| aspartyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600513|gb|ABD45981.1| aspartyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 588

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 70/211 (33%), Gaps = 29/211 (13%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
           Q+ S+  +  +   R R            ++ R+ I S +R +  +  F E  +  L  +
Sbjct: 115 QVDSEFPYPEETRLRYRYLDLRRNKLKKNIILRSKIISEIRRFMEDEGFTEFQTPILTAT 174

Query: 53  -PGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
            P     +I            + +      +P+   + L+ AG ++ F  A  +R+ +  
Sbjct: 175 SPEGARDYIVPSRIHKGKFYALPQ------APQQFKQLLMVAGFDRYFQIAPCFRDEDSR 228

Query: 111 CLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
               P EF  L+   +    E++ +    ++         K    +  N       E I 
Sbjct: 229 ADRSPGEFYQLDVEMSFVGQEEVFELMEQLL---------KHIFSKYSNRKVSGSFERIP 279

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
             E+   Y   D     +     D   ++ +
Sbjct: 280 YKESMLLY-GTDKPDLRNPIKIADFTSIFKE 309



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 75/265 (28%), Gaps = 17/265 (6%)

Query: 87  KKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV 146
           K+   A   +        R         P        R                R  A +
Sbjct: 308 KESGLAVFIEQIQKGAVVR-------GIPAPNCGNKPRKFFDEMIRYATTELCARGLAYL 360

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
                          F   E I+     A     D      + ++    +     ++ G+
Sbjct: 361 CFDNGIPKGP--IAKFLSSEQISEIAKKASLGKGDAIFFSCDAERAATKIAGAIRKKLGL 418

Query: 207 RV----AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
            +      +  +  I +    E  E    ++        P      A         ++++
Sbjct: 419 ELSLLDNSEYKFCWIVNFPYFELDETTGKLDFSHNPFSMP-EGGLEALNGDPLKVVSQQY 477

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGI 322
           ++    +EL +       P      FE    +++ +      + E F      +P  +GI
Sbjct: 478 DIVCNGVELSSGAVRNHKPEIMYRAFEILGLDREYVNRVFGALIESF---QYGVPPHAGI 534

Query: 323 AMGFDRLVMLVTGANNINEVIWTPF 347
           A G DR+VML+    NI EVI  P 
Sbjct: 535 APGIDRMVMLIAEEENIREVIAFPM 559


>gi|332638291|ref|ZP_08417154.1| aspartyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 601

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 68/188 (36%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ I ++  E+   N FI+I++  L   +P     ++            
Sbjct: 134 RRPEMQKNLRIRSKITAATHEFLDANGFIDIETPYLAKSTPEGARDYLVPSRVYPGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A A+R+ +     QPEFT L+   +  + ++
Sbjct: 194 LPQ------SPQLFKQLLMGAGFDRYYQVARAFRDEDLRGDRQPEFTQLDVETSFMTQDE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M      +    +                 +E   +  A+A AR+   D        + 
Sbjct: 248 IMALVNEWVAAIMKKTVDVEL--------NTTEIPVLDYADAMARF-GTDKPDMRFGMEL 298

Query: 192 PDRHLLYL 199
            D   L  
Sbjct: 299 QDLSDLMA 306



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 52/155 (33%), Gaps = 7/155 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAP-ESALANIY 252
            L  + A++ G+       ++ + +  +   + E +  I                L    
Sbjct: 408 ALRRMTAKEMGLIDDTKWAFAWVVNWPLFEHQAEEDRWIAAHHPFTMPNEEDLPLLETTD 467

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
            A     + ++L     EL +    +     Q          K+      +      L  
Sbjct: 468 GAHQAHAQSYDLVLNGYELGSGSIRIHRMDIQEKMLSALGFTKEA----AHDAFGFLLEG 523

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   GIA+G DRL ML+ G +NI EVI  P
Sbjct: 524 MEYGFPPMGGIALGLDRLAMLLAGRDNIREVIAFP 558


>gi|256545122|ref|ZP_05472488.1| aspartate--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256399163|gb|EEU12774.1| aspartate--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 585

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 18/183 (9%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ I   +REY  +N F E+++  L   +P     ++            + +     
Sbjct: 141 LKLRSDIVRCMREYMYDNGFTEVETPFLTKPTPEGARDYLVPSRVNQGKFYALPQ----- 195

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+    ++ F     +R+ +     QPEFT L+   +    + ++K    +
Sbjct: 196 -SPQLMKQLLMIGSLDRYFQIVKCFRDEDLRANRQPEFTQLDLELSFADQDDVIKVNEGL 254

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +         K       + +     + +  +EA   Y   D           D   ++ 
Sbjct: 255 L---------KTLFDNFTDYDLKLPIQRMDYSEAMNSY-GSDKPDLRYGYKINDISEIFK 304

Query: 200 QAQ 202
              
Sbjct: 305 DCD 307



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 53/157 (33%), Gaps = 6/157 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +    +  +  + +  + E  E              P  E     +   
Sbjct: 408 ALRRKVAKDQNL-YEKEYAFCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDIDLLLTEP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +   T+ +++     E+      + +   Q   F+     K    +        F+  L 
Sbjct: 467 EKVRTQAYDIVINGDEMGGGSVRINNQELQEKVFK---ALKLSDDDIEQKF-GFFIEALQ 522

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              P  +G+A G DRLVML     NI ++I  P +QS
Sbjct: 523 YGTPPHAGLAYGLDRLVMLFAKTENIKDIIAFPKTQS 559


>gi|297544515|ref|YP_003676817.1| aspartyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842290|gb|ADH60806.1| aspartyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 592

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I   +R++  +N FIEI++  L   +P     ++            
Sbjct: 141 RRPSMQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYLVPSRIYPGKFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K +  A   R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQPEFTQIDIEMSFVEVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +I    +       +            + ++  EA  R+   D        + 
Sbjct: 255 VLEINEKMIAQIFKETLGIDVT---------IPFKRLSYQEAMERF-GTDKPDLRFGMEL 304

Query: 192 PD 193
            D
Sbjct: 305 KD 306



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 52/159 (32%), Gaps = 9/159 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL     ++  +   +   +  I    L+E                 P  E         
Sbjct: 414 HLRLELGKRLNLIDENKYEFVWIVDFPLLEYDSEEKRYVAKHHPFTAPKDEDIDLLEKEP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                K +++    +E+      + D   Q+  F      K       + +      +  
Sbjct: 474 LKVRAKAYDIVLNGVEIGGGSIRIHDTELQKRMF------KVLGFSDEKAWERFGFLMEA 527

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                P   GIA G DRL M++TG++ I +VI  P +Q+
Sbjct: 528 FKYGAPPHGGIAYGLDRLAMIITGSDTIRDVIAFPKTQN 566


>gi|91217020|ref|ZP_01253983.1| aspartyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91184891|gb|EAS71271.1| aspartyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 582

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 75/245 (30%), Gaps = 35/245 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   R R            L+ R+ +  ++R Y  + +FIE+++  L   +P      R 
Sbjct: 122 DLRMRYRYLDIRRNPVKNKLIFRSKVSMAVRNYLTQKEFIEVETPYLIKSTPEG---ARD 178

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +     +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++
Sbjct: 179 FVVPSRMN--AGQFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQPEFTQID 236

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--- 178
                   E ++     + +   +  N               +   IT  EA   Y    
Sbjct: 237 CEMTFVEQEDILNTFEGLTKYLLKEINGVEVK----------DFPRITYDEAMQTYGNDK 286

Query: 179 -----NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLGI 232
                 +  G         D  +        GI +            +++     P +G 
Sbjct: 287 PDIRFGMKFGELNAIAQHKDFKVFNEAELVVGIAIPGAASYSRKDIDKLIEWMKRPQVGA 346

Query: 233 NCCTI 237
                
Sbjct: 347 KGMVY 351



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R   +     +    L+E  E     +        P            
Sbjct: 404 ALRMEMGNRLGLRKPKEFAPLWVVDFPLLEWDEATQRFHAMHHPFTSPKEGQLELLATDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  ++L     E+      + D   Q   F+     K+    E        +    
Sbjct: 464 GAVKANAYDLVLNGNEIGGGSIRIHDQKTQSMMFDYLGFTKE----EAEAQFGFLMKAFT 519

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DRLV ++ G  +I + I  P
Sbjct: 520 YGAPPHGGIAFGLDRLVAILGGQESIRDYIAFP 552


>gi|294670692|ref|ZP_06735567.1| hypothetical protein NEIELOOT_02414 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307580|gb|EFE48823.1| hypothetical protein NEIELOOT_02414 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 602

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 67/207 (32%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A                +   +  AEA   Y   D      N   
Sbjct: 245 IMDITEGMAKQVFQDALGVDLG----------DFPRMPYAEAMF-YYGSDKPDMRINLKF 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L    +    R A D     + 
Sbjct: 294 TELTDLMKTEEFKVFRGAADMKGGRVV 320



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 49/182 (26%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+          +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKAKVVNEAIGALRIKVGLEHGAENGYFVDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEDADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|148989939|ref|ZP_01821222.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924724|gb|EDK75809.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 587

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 27/198 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +              +   +A A Y + 
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVT---------LPFPRMKYDDAMALYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLY 198
              T  D   Q    ++ 
Sbjct: 287 KPDTRFDMLLQDLTEVVR 304


>gi|300309541|ref|YP_003773633.1| aspartyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072326|gb|ADJ61725.1| aspartyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 599

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 68/184 (36%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R++     FI+I++  L   +P     ++            
Sbjct: 131 RRPQMQNNLRLRYKVAMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVPSRVNAGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEQE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +IR   + A          + +  +    +  A A  +Y +   D+   L+  
Sbjct: 245 IRDLFEGMIRLVFKNAL---------DIDLPNPFPVMDFATAMGKYGSDKPDMRVKLEFT 295

Query: 190 DQPD 193
           +  D
Sbjct: 296 ELTD 299



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 42/146 (28%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+          +    + E  E              P                 K 
Sbjct: 422 KKNGL-FDDAWRPLWVVDFPMFEYDEDGQRWVALHHPFTSPKDGHEDFISTNPGAAIAKA 480

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   F    +  K    E        L  L    P   
Sbjct: 481 YDMVLNGWELGGGSVRIHRADVQSKVF----RALKIDDEEAKLKFGFLLDALQYGAPPHG 536

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DRLV ++ GA +I +VI  P
Sbjct: 537 GIAFGLDRLVTMMAGAESIRDVIAFP 562


>gi|57239393|ref|YP_180529.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579362|ref|YP_197574.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819221|sp|Q5HAL5|SYD_EHRRW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|57161472|emb|CAH58398.1| aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417988|emb|CAI27192.1| Aspartyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 590

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 76/259 (29%), Gaps = 11/259 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  ++ R+ + + +R+      FIEI +  L   SP     ++            
Sbjct: 135 RRDKVKNNIILRSKVITEIRKSMENMGFIEIQTPILTSSSPEGARDYLVPSRIHHGKFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  + E
Sbjct: 195 LPQ------APQLFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVTQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      ++       + K  + +    +      Y    +   R   +    T    D
Sbjct: 249 DIFNIIEPVMINIFSKFSNKTINKEFPKISYHDAMLYYGSDKPDLRNPLVIQDVTEIFRD 308

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE--PNLGINCCTILDRYPAPESAL 248
              +       Q   +R       +         KIE    LG      +       +  
Sbjct: 309 SEFKIFNSNIKQGMVVRAIPAPNTAHNPRSFFDSKIEFAKTLGAQGLGYITFIDDSLAKG 368

Query: 249 ANIYPADPRFTKRFELYAC 267
                 D       +L   
Sbjct: 369 PIAKFLDKDRLDNIKLICN 387



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 50/163 (30%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +  L  ++  +   +   +  +      +       IN        P            
Sbjct: 410 EVRTLLGKELNLIEENTFKFCWVIDFPYFKYDHKEKSINFFHNPFSMPQGGLEALENQDP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    IE+ +              F          Y +   +DE F     
Sbjct: 470 LNILAYQYDIVCNGIEISSGAIRNHKLNIMYKAFSI------AGYTKEM-VDEKFKALTR 522

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR+VML+    NI EVI  P +QS ++
Sbjct: 523 AFKFGAPPHGGIAPGIDRIVMLLADVPNIREVICFPLNQSGED 565


>gi|32490862|ref|NP_871116.1| hypothetical protein WGLp113 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166068|dbj|BAC24259.1| aspS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 560

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 85/229 (37%), Gaps = 29/229 (12%)

Query: 3   QIP---------SQPWWNRDFHYRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSL- 49
            +P          +    R  + RR      L  R+ I + +R+   + +FI+I++  L 
Sbjct: 106 PLPIDFNYKNSEEKYLKFRYLYIRRSKLFKILKLRSKITNYIRKVMEKRKFIDIETPILS 165

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             +       R +     I         L  SP+   + L+ +G +K +  A  +R+ + 
Sbjct: 166 HSTTEG---ARDYLVHSRIH--PGMFYSLPQSPQLFKQILMISGIDKYYQIAKCFRDEDL 220

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
               QPEFT ++   + ++ E++      +I+       +    F N   N       IT
Sbjct: 221 RSDRQPEFTQVDCEISFDNGEKVRDLIEILIK-------KLWIKFFNFELNN---FPIIT 270

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
             ++  R+   D     ++ +  +   L+   ++  I ++     + I 
Sbjct: 271 YNDSIIRF-GSDKPDLRNSLELINVTNLFKINERNKIALSKYKILAIIL 318



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 21/165 (12%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI------EPNLGINCCTILDRYPAPESA 247
           +  +Y  A +  I++  +   +DI S   +  +           +         P   + 
Sbjct: 391 KDCVYEIAGKLRIKIGLEFNITDIESWKPVWIVNFPLFKTKEKKLVSVHHPFTSPKNFNK 450

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-----KEMQEKKKIYNET 302
                      +  ++L    +E+ +    +     Q+  F+     +E Q K       
Sbjct: 451 SKIFKNPLSFVSNSYDLVINGVEIGSGSSRIHKYEIQKIIFDVLGIAEETQNKNFG---- 506

Query: 303 YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 FL  L    P  +G A G DR+VML++  NNI  VI  P
Sbjct: 507 -----FFLNALKYGAPPHAGFAFGLDRIVMLISKTNNIRNVIAFP 546


>gi|326390138|ref|ZP_08211699.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993786|gb|EGD52217.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 592

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 18/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I   +R++   N FIEI++  L   +P     ++            
Sbjct: 141 RRPSMQQNLMTRFKITKVVRDFLNRNGFIEIETPLLIKSTPEGARDYLVPSRIYPGKFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K +  A   R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQPEFTQIDIEMSFVEVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++K    +I    +              +     + ++  E+  R+   D        + 
Sbjct: 255 VLKINEKMIAEIFKETLG---------IDVPIPFKRLSYQESMERF-GTDKPDLRFGMEL 304

Query: 192 PDRHLLYLQAQQAGIR 207
            D   +  Q++    +
Sbjct: 305 KDLSDIVAQSEFNVFK 320



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL     ++  +   +   +  I    L+E  E              P  E         
Sbjct: 414 HLRLELGKRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K +++     E+      + D   Q+  F      E++  E+     E +     
Sbjct: 474 LKVRAKAYDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFK---- 529

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                   P   GIA G DRL M++TG++ I +VI  P +Q+
Sbjct: 530 -----YGAPPHGGIAYGLDRLAMIITGSDTIRDVIAFPKTQN 566


>gi|289549034|ref|YP_003474022.1| aspartyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182651|gb|ADC89895.1| aspartyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 597

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 63/182 (34%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +L R+     +R   VE  F+E+++  L   +P      R F     +    
Sbjct: 134 RRESMKENILFRHRSYQIIRRTLVEKGFVEVETPFLTKSTPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG +K F      R+ +     QPEFT ++   +    E 
Sbjct: 188 PGKFYALPQSPQLFKQVLMVAGIDKYFQIVKCLRDEDLRADRQPEFTQVDIEMSFVDEED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +              +     + I+ AE   RY   D        + 
Sbjct: 248 VIQISEELVSNLFKELLG---------IDLKRPFDRISYAEVMERY-GTDKPDRRFGLEL 297

Query: 192 PD 193
            D
Sbjct: 298 VD 299



 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 17/164 (10%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILD-----RYPAPESALA 249
           L    A+Q G+          +    +L    E    ++             P  E AL 
Sbjct: 407 LRLQIAKQYGLIDEEKWDILWVVDFPLLEWDQEEGRFVSVHHPFTAPRQEDIPKLEEALR 466

Query: 250 NIYPADPRF------TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
              P D          + ++L     E+      + DP  Q+  F+     ++    E  
Sbjct: 467 AEDPKDKIKLVSSVKARAYDLVINGEEVGGGSVRIHDPKLQKMIFDLLNISQQ----EAE 522

Query: 304 PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 L  L    P  +GIA G DRL+ ++ G ++I +VI  P
Sbjct: 523 EKFGFLLRALRYGAPPHAGIAFGLDRLLAIMRGLDSIRDVIAFP 566


>gi|167037449|ref|YP_001665027.1| aspartyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115863|ref|YP_004186022.1| aspartyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|238687695|sp|B0K978|SYD_THEP3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166856283|gb|ABY94691.1| aspartyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928954|gb|ADV79639.1| aspartyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 592

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 18/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I   +R++   N FIEI++  L   +P     ++            
Sbjct: 141 RRPSMQQNLMTRFKITKVVRDFLNRNGFIEIETPLLIKSTPEGARDYLVPSRIYPGKFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K +  A   R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQPEFTQIDIEMSFVEVED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++K    +I    +              +     + ++  E+  R+   D        + 
Sbjct: 255 VLKINEKMIAEIFKETLG---------IDVPIPFKRLSYQESMERF-GTDKPDLRFGMEL 304

Query: 192 PDRHLLYLQAQQAGIR 207
            D   +  Q++    +
Sbjct: 305 KDLSDIVAQSEFNVFK 320



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL     ++  +   +   +  I    L+E  E              P  E         
Sbjct: 414 HLRLELGKRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K +++     E+      + D   Q+  F      E++  E+     E +     
Sbjct: 474 LKVRAKAYDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFK---- 529

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                   P   GIA G DRL M++TG++ I +VI  P +Q+
Sbjct: 530 -----YGAPPHGGIAYGLDRLAMIITGSDTIRDVIAFPKTQN 566


>gi|320450610|ref|YP_004202706.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150779|gb|ADW22157.1| aspartyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 581

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 65/181 (35%), Gaps = 17/181 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  L  R+ +  ++ ++     FI++++  L   +P      R F      Q  +
Sbjct: 136 RRRKMQENLRLRHRVIKAIWDFLDREGFIQVETPFLTKSTPEG---ARDFLVPYRQQPGL 192

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG ++ F  A  +R+ +     QP+FT ++   +    E 
Sbjct: 193 ---FYALPQSPQLFKQMLMVAGFDRYFQIARCFRDEDLRADRQPDFTQMDLEMSFVEVED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++      A                    +T  EA  R+ +    T      +
Sbjct: 250 ILELNERLMAHVFREALGVELP---------LPFPRLTYQEAMERFGSDKPDTRFGLELK 300

Query: 192 P 192
            
Sbjct: 301 E 301



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 52/149 (34%), Gaps = 13/149 (8%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
               +  +    L+E  E              P PE                ++L     
Sbjct: 416 EGFRFLWVVDFPLLEWDEERGQYTYMHHPFTSPHPEDLPLLDTDPGKVRALAYDLVLNGT 475

Query: 270 ELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAM 324
           E+      + DP  Q   F+     E ++++K           FL  L    P   GIA 
Sbjct: 476 EVGGGSIRIHDPALQARMFQVLGIGEEEQREKFG--------FFLEALTYGAPPHGGIAW 527

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G DRL+ L+T + +I EVI  P ++  ++
Sbjct: 528 GLDRLLALMTASPSIREVIAFPKNKEGKD 556


>gi|255325074|ref|ZP_05366180.1| aspartate--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297639|gb|EET76950.1| aspartate--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 610

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R+   L  R+    + R+    + F EI++ +L   +P      R F     +    
Sbjct: 134 RRERQAQALRLRSAANRAARKVLDSHDFAEIETPTLTRSTPEGA---RDFLVPARL--KP 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 189 GTWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 248

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     I+    ++   +I +              +T A+A   Y +       D     
Sbjct: 249 IALAEEIVTELWKLIGYEIKT----------PIPRMTYADAMKYYGSDKPDLRFDIKIVE 298

Query: 193 DRHLLYL 199
                  
Sbjct: 299 CTEFFKD 305



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 36/119 (30%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +            P PE                +++     E+      +     Q+  F
Sbjct: 446 HSKWTAVHHAFTSPKPEYLDNFDQNPGEALAYAYDIVCNGNEIGGGSIRIHQQDVQKRVF 505

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +           E        L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 506 DVMGI----GDEEAQEKFGFLLDAFQYGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 560


>gi|41407161|ref|NP_959997.1| aspartyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|62287578|sp|Q741M7|SYD_MYCPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|41395512|gb|AAS03380.1| AspS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 591

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 71/212 (33%), Gaps = 32/212 (15%)

Query: 3   QIP---SQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P    +P    +   + R            +  R+ + ++ RE    + F+EI++ ++
Sbjct: 106 PLPFQLDEPAG-EELRLKYRYLDLRRDAPASAIRLRSKVNAAAREVLDRHDFVEIETPTI 164

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              +P      R F     +        Y L  SP+   + L+ AG E+ +  A  +R+ 
Sbjct: 165 TRSTPEGA---RDFLVPARLH---PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDE 218

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT L+   +    E ++     I+     +             +       
Sbjct: 219 DFRADRQPEFTQLDMEMSFVDAEDVIAISEEILAALWALIG----------YDIPRPIPR 268

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I+ A+A ARY +                    
Sbjct: 269 ISYADAMARYGSDKPDLRFGLELVECSEFFKD 300



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 5/89 (5%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
              +++     E+      +     Q   F     +      E        L   T   P
Sbjct: 471 ADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDHA----EAQEKFGFLLEAFTFGAP 526

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              GIA G+DR+  L++  ++I EVI  P
Sbjct: 527 PHGGIAFGWDRINALLSRVDSIREVIAFP 555


>gi|281422425|ref|ZP_06253424.1| aspartate--tRNA ligase [Prevotella copri DSM 18205]
 gi|281403488|gb|EFB34168.1| aspartate--tRNA ligase [Prevotella copri DSM 18205]
          Length = 586

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 70/220 (31%), Gaps = 8/220 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
                R  L  R+ +   +R +     F+E+++  L          R F     +     
Sbjct: 132 RRPAVRKNLELRHRMCILIRNFLDAQNFMEVETPVL--IGSTPEGARDFVVPSRMN--PG 187

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
           +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    + ++
Sbjct: 188 QFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQDDVI 247

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
                + R   +           +    + +      ++       ++     D      
Sbjct: 248 NLFEEMARHLFKEIRG--VELPKLEQMTWHDAMRRFGSDKPDLRFGMEFVELKDAFTGKG 305

Query: 194 RHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLG 231
              ++ +A+  G        D      + +      P +G
Sbjct: 306 NFSVFDEAKYIGGICVPGCADYCRKQLNELTDFVKRPQVG 345



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 8/137 (5%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
                I   +     E    +            +  L + +P   R  K ++     IE+
Sbjct: 423 KCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEQVR-AKAYDFVCNGIEV 481

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL-TEMPQSSGIAMGFDRL 329
                 + D   Q   FE           E       FL        P  +G+A G DR 
Sbjct: 482 GGGSLRIHDTQLQEKMFEVL-----GFTPERAEAQFGFLMNAFKYGAPPHAGLAFGLDRF 536

Query: 330 VMLVTGANNINEVIWTP 346
           V ++ G ++I + I  P
Sbjct: 537 VSIMAGLDSIRDCIAFP 553


>gi|261401382|ref|ZP_05987507.1| aspartate--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208589|gb|EEZ75044.1| aspartate--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 602

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 64/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +       +      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGDFPRMPYSEAMFYYGS--DKPDMRIGLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 49/171 (28%), Gaps = 5/171 (2%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +   D    ++      R  + L+  +       +     +    + E  E         
Sbjct: 398 FFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVH 457

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P        +        + +++     E+      +     Q   F       K
Sbjct: 458 HPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEVGGGSIRIHRADVQEKVF----AALK 513

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 514 ISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|119716625|ref|YP_923590.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|166225368|sp|A1SJB8|SYD_NOCSJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119537286|gb|ABL81903.1| aspartyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 590

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 69/195 (35%), Gaps = 22/195 (11%)

Query: 11  NRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +   R       L  R+ +  + R+    + F+EI++ +L   +P      R F  
Sbjct: 120 LKHRYLDLRRSGPNNALRLRSKVNKAARDVLDRHDFVEIETPTLTRSTPEG---ARDFLV 176

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +Q        L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   
Sbjct: 177 PARLQ--PGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDIEM 234

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    + ++     ++    ++    +                +T AE+  RY   D   
Sbjct: 235 SFVEQDDVLAVAEEVLVALWKLVGHDVPV----------PLPRMTYAESMERY-GTDKPD 283

Query: 185 TLDNPDQPDRHLLYL 199
                +  D    + 
Sbjct: 284 LRMGQELVDCTAYFA 298



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 34/98 (34%), Gaps = 9/98 (9%)

Query: 253 PADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN-ETYPIDEDF 309
            ADP       +++     E+      +     Q+  F         I   E        
Sbjct: 460 DADPGSALAWAYDIVCNGNEIGGGSIRIHREDVQKRVFAIM-----GIDEAEAQEKFGFL 514

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L       P   GIA G+DR+V L+ G  +I +VI  P
Sbjct: 515 LEAFKYGAPPHGGIAFGWDRIVALLAGTESIRDVIAFP 552


>gi|294507994|ref|YP_003572052.1| Aspartyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294344322|emb|CBH25100.1| Aspartyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 629

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 10/157 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR---- 257
           ++ G+R   D+   D F  +    +          +   +P       ++   D      
Sbjct: 437 EELGLRPPADEGD-DAFLWVTDFPLMEYDEEAGRPVSMHHPFTAPHPDDLDRLDEDPTQV 495

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
             + ++L     E+      + +   Q   F+    +      E        L  L    
Sbjct: 496 QARAYDLVLNGNEIGGGSIRIHNHETQMQVFDVLGID----EEEAQDRFGFLLDALRYGA 551

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   GIA+G DRLVML+ GA+++ +VI  P +QS +E
Sbjct: 552 PPHGGIALGLDRLVMLLAGADSLRDVIAFPKTQSGKE 588



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 63/187 (33%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ +  +   YF  + F+E+++  L + +P      R F     +    
Sbjct: 153 RRPDLQENIELRHRLYQTTHRYFDAHDFLEVETPVLMKSTPEG---ARDFLVPSRLH--P 207

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G ++       +R+ +     QPEFT ++      + EQ+
Sbjct: 208 GRFYALPQSPQTYKQLLMVGGLDRYVQIVKCFRDEDLRADRQPEFTQIDVEMTFATEEQV 267

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            +    ++    +                 +    +T  EA   Y   D      + +  
Sbjct: 268 YELTEGLMADLWDTLEDTTLE---------TPFPRMTYDEALRTY-GTDKPDLRFDLELH 317

Query: 193 DRHLLYL 199
           D    + 
Sbjct: 318 DVSDCFA 324


>gi|325202727|gb|ADY98181.1| aspartyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325208723|gb|ADZ04175.1| aspartyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 602

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALGVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 49/171 (28%), Gaps = 5/171 (2%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +   D    ++      R  + L+  +       +     +    + E  E         
Sbjct: 398 FFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVH 457

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P        +        + +++     E+      +     Q   F       K
Sbjct: 458 HPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVF----AALK 513

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 514 ISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|319442141|ref|ZP_07991297.1| aspartyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 600

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 65/188 (34%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R+   L  R+ +  + R       F EI++ +L   +P      R F     ++   
Sbjct: 133 RRERQAHALRLRSKVSQAARGVLSGEDFTEIETPTLTRSTPEGA---RDFLVPARLR--- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    + 
Sbjct: 187 PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++    NI+    +     I +              +T AEA  +Y +       D    
Sbjct: 247 VIALAENILTAVWKEIGYDIQT----------PIPRMTYAEAMEKYGSDKPDLRFDIQIT 296

Query: 192 PDRHLLYL 199
                   
Sbjct: 297 ECTEFFKD 304



 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 19/115 (16%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF------EKEM 292
           + +P+    + +  +P       +++     E+      +     Q   F      E+E 
Sbjct: 455 FTSPKPEWIDSFDENPGEATAYAYDIVCNGNEIGGGSIRIHQRDVQERVFAVMGISEEEA 514

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +EK              L       P   GIA G+DR+V L+ G  +I +VI  P
Sbjct: 515 REKFG----------FLLDAFAFGAPPHGGIAFGWDRIVSLLGGYESIRDVIAFP 559


>gi|311739535|ref|ZP_07713370.1| aspartate--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311305351|gb|EFQ81419.1| aspartate--tRNA ligase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 610

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R+   L  R+    + R+    + F EI++ +L   +P      R F     +    
Sbjct: 134 RRERQAQALRLRSAANRAARKVLDSHDFAEIETPTLTRSTPEGA---RDFLVPARL--KP 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 189 GTWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDV 248

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     I+    ++   +I +              +T A+A   Y +       D     
Sbjct: 249 IALAEEIVTELWKLIGYEIKT----------PIPRMTYADAMKYYGSDKPDLRFDIKIVE 298

Query: 193 DRHLLYL 199
                  
Sbjct: 299 CTEFFKD 305



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 36/119 (30%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +            P PE                +++     E+      +     Q+  F
Sbjct: 446 HSKWTAVHHAFTSPKPEYLDNFDQNPGEALAYAYDIVCNGNEIGGGSIRIHQQDVQKRVF 505

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +           E        L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 506 DVMGI----GDEEAQEKFGFLLDAFQYGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 560


>gi|308388667|gb|ADO30987.1| aspartyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 602

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALGVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 49/171 (28%), Gaps = 5/171 (2%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +   D    ++      R  + L+  +       +     +    + E  E         
Sbjct: 398 FFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVH 457

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P        +        + +++     E+      +     Q   F       K
Sbjct: 458 HPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVF----AALK 513

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 514 ISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|171464173|ref|YP_001798286.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193711|gb|ACB44672.1| aspartyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 600

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 9/197 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R Y  +  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQKNLRLRYNVAMECRRYLDDAGFIDIETPMLTKSTPEGARDYLVPSRVHD----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   A  S  +
Sbjct: 188 -GQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDCETAFLSELE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     N+IR   +                          +   R  N +     D    
Sbjct: 247 IRDLFENMIRHIFKKTINVELPNPFPTMPYSEGMARFGSDKPDLRV-NFEFTELTDLMKD 305

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A Q G RV
Sbjct: 306 VDFKVFSGAANQVGGRV 322



 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 45/146 (30%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+          +    + +  E       C      P  E              K 
Sbjct: 424 KEHGL-FTEGWKPLWVVDFPMFDYDEGEARWVACHHPFTSPKDEHMQYLETDPGKCLAKA 482

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     E+      +     Q   F     + +    E        L  L    P   
Sbjct: 483 YDMVLNGSEIGGGSVRIHQEAVQSQVFRALKIDAE----EAQAKFGFLLDALQYGAPPHG 538

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DR+V ++TGA +I +VI  P
Sbjct: 539 GIAFGLDRIVTMMTGAESIRDVIAFP 564


>gi|323441222|gb|EGA98900.1| lysyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 51

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            + +DED++  L   MP + G+ +G DRLVML+T + +I +V+  P+ +
Sbjct: 1   AHEMDEDYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMR 49


>gi|218768770|ref|YP_002343282.1| aspartyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|24212422|sp|Q9JT23|SYD_NEIMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|121052778|emb|CAM09124.1| aspartyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|319411010|emb|CBY91408.1| aspartyl-tRNA synthetase (aspartate-tRNA ligase; AspRS) [Neisseria
           meningitidis WUE 2594]
          Length = 602

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALGVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 49/171 (28%), Gaps = 5/171 (2%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +   D    ++      R  + L+  +       +     +    + E  E         
Sbjct: 398 FFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVH 457

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P        +        + +++     E+      +     Q   F       K
Sbjct: 458 HPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVF----AALK 513

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 514 ISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|110598222|ref|ZP_01386498.1| aspartyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110340137|gb|EAT58636.1| aspartyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 615

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 18/183 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ + +++R Y  E +FIEI +  L   SP      R F     +    
Sbjct: 155 RREKIHENIIFRSRLTAAIRRYLEEREFIEIQTPILTSSSPEG---ARDFLVPSRLH--- 208

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G  + F  A  +R+ +      P EF  L+   A    +
Sbjct: 209 PGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQLDMEMAFIEQD 268

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            L      ++       ++K  +              I+  +   R+   D        +
Sbjct: 269 DLFAILEGMVEHLTRTMSEKRITQ--------FPFPRISYKDVMNRF-GTDKPDLRIPIE 319

Query: 191 QPD 193
             D
Sbjct: 320 ISD 322



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 54/150 (36%), Gaps = 13/150 (8%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPADPRFTKRFELYAC 267
             + ++  I    + E  E    I+        P     AL    P D     ++++   
Sbjct: 443 KDELSFCWIVDFPMFEYNEEAKKIDFSHNPFSMPQGEMEALETKSPLDI-LAYQYDIVCN 501

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIA 323
            IEL +       P      FE         Y +   +D  F   +       P   GIA
Sbjct: 502 GIELSSGAIRNHRPDIMYKAFEI------AGYPKE-EVDLRFGHMIEAFKLGAPPHGGIA 554

Query: 324 MGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            G DRLVM++    NI EVI  P +QS Q+
Sbjct: 555 PGLDRLVMILRDEQNIREVIAFPMNQSAQD 584


>gi|325290213|ref|YP_004266394.1| aspartyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965614|gb|ADY56393.1| aspartyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 598

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 5/157 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A++  +          +    L+E  E              P  E         
Sbjct: 408 NLRIELAKRLRLIPGDAVNCLWVTEFPLLEYDEEEKRFAAKHHQFTAPMNEDRELLDTDP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
               +K +++    +EL      +     Q   F    +       E +      L    
Sbjct: 468 LNVRSKAYDMVLNGMELGGGSIRIHQRDIQEKIF----KLIGLSEEEAHEKFGYLLDAFE 523

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              P   G+A G DRL+M++TG +NI +VI  P +QS
Sbjct: 524 YGTPPHGGLAFGLDRLIMILTGRDNIRDVIAFPKTQS 560



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 73/200 (36%), Gaps = 21/200 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ ++ +   +R +  +N F+EI++  L   +P     ++            
Sbjct: 135 RRPELQKVLMVKHKVMQIMRSFLDQNGFLEIETPILGRSTPEGARDYLVPSRVNQGCFYG 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG EK F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 195 LPQ------SPQIYKQLLMVAGVEKYFQIARCFRDEDLRADRQPEFTQLDMEMSFIEIED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I         K                 ++ AEA  RY   D   T    + 
Sbjct: 249 IIPLMEQLIAKIFLEVTGKEIP---------LPLPRLSYAEAMERY-GSDKPDTRFGLEL 298

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            D   +    +++G +V  D
Sbjct: 299 VDVAQVV---RESGFKVFAD 315


>gi|270291765|ref|ZP_06197981.1| aspartate--tRNA ligase [Streptococcus sp. M143]
 gi|270279850|gb|EFA25691.1| aspartate--tRNA ligase [Streptococcus sp. M143]
          Length = 585

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGNLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|324995196|gb|EGC27108.1| aspartate--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 578

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 7/131 (5%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
           F  ++   +              +P  +    +    D   +  +++     E+      
Sbjct: 423 FLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFEDGQEPDQFRSHAYDIVLNGYEIGGGSLR 482

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           + +   Q   FE        +  E Y  D   FL  L    P   G+A+G DRLVM++ G
Sbjct: 483 IHNRKAQEAMFE-----LLGMSWEDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAG 537

Query: 336 ANNINEVIWTP 346
             NI +VI  P
Sbjct: 538 EENIRQVIAFP 548



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 70/190 (36%), Gaps = 7/190 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +      +           +   R+  ++L +  D     
Sbjct: 246 RALVEAMLKAVVKKTHGLELTEAFPTISYEEAMSRFGSDKPDTRF-GLELKSLTDLCQSN 304

Query: 193 DRHLLYLQAQ 202
           D  L+     
Sbjct: 305 DSLLIKKALD 314


>gi|284100718|ref|ZP_06386006.1| aspartyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
 gi|283830374|gb|EFC34595.1| aspartyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
          Length = 565

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 73/207 (35%), Gaps = 21/207 (10%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +  +        +  L  R+ +    R++  E +F+EI++  L   +P     ++     
Sbjct: 106 KHRYLDLRRPPMQRLLALRHDVTYRTRQFLHERRFLEIETPILTKSTPEGARDYLVPSRV 165

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                  + +      SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   
Sbjct: 166 NQGAFFALPQ------SPQLFKQILMVGGADRYFQIARCFRDEDLRLDRQPEFTQIDLEM 219

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    + +M     ++R   +              +  S    +T  EA +RY   D   
Sbjct: 220 SFVERDDVMNLTEELLRLVCKETAG---------ISLPSPFPRLTYQEAMSRY-GTDKPD 269

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHD 211
                +  D   L   A+    +V  D
Sbjct: 270 RRFGLELHD---LNEVAKHVEFKVFRD 293



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 21/150 (14%)

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD---------------PR 257
                   I  ++ EP    +         A +  +A  +P                   
Sbjct: 389 YLGVELELIDHDRWEPVWVTDFPMFEYDA-AEQRYVALHHPFTSPRMDDLPNLDSDPLHA 447

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             + +++     E+      +     Q   F+     +              L  L    
Sbjct: 448 HAQAYDVVLNGFEIGGGSIRIHGSELQHKVFKLLGISRDA----AQEKFGFLLDALEYGA 503

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   GIA+G DRLVML+  A +I EVI  P
Sbjct: 504 PPHGGIALGLDRLVMLLGKAESIREVIPFP 533


>gi|83814246|ref|YP_446073.1| aspartyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|97196860|sp|Q2S158|SYD_SALRD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83755640|gb|ABC43753.1| aspartyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 629

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 10/157 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR---- 257
           ++ G+R   D+   D F  +    +          +   +P       ++   D      
Sbjct: 437 EELGLRPPADEGD-DAFLWVTDFPLMEYDEEAGRPVSMHHPFTAPHPDDLDRLDEDPTQV 495

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
             + ++L     E+      + +   Q   F+    +      E        L  L    
Sbjct: 496 QARAYDLVLNGNEIGGGSIRIHNHETQMQVFDVLGID----EEEAQDRFGFLLDALRYGA 551

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   GIA+G DRLVML+ GA+++ +VI  P +QS +E
Sbjct: 552 PPHGGIALGLDRLVMLLAGADSLRDVIAFPKTQSGKE 588



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 63/187 (33%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ +  +   YF  + F+E+++  L + +P      R F     +    
Sbjct: 153 RRPDLQENIELRHRLYQTTHRYFDAHDFLEVETPVLMKSTPEG---ARDFLVPSRLH--P 207

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G ++       +R+ +     QPEFT ++      + EQ+
Sbjct: 208 GRFYALPQSPQTYKQLLMVGGLDRYVQIVKCFRDEDLRADRQPEFTQIDVEMTFATEEQV 267

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            +    ++    +                 +    +T  EA   Y   D      + +  
Sbjct: 268 YELTEGLMADLWDTLEDTTLE---------TPFPRMTYDEALRTY-GTDKPDLRFDLELH 317

Query: 193 DRHLLYL 199
           D    + 
Sbjct: 318 DVSDCFA 324


>gi|114330631|ref|YP_746853.1| aspartyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122314381|sp|Q0AIE4|SYD_NITEC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114307645|gb|ABI58888.1| aspartyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 593

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 67/188 (35%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +  R+ +  + R +  ++ FI++++  L   +P     ++      +     
Sbjct: 131 RRPAMQHNIRLRHKVTMATRVFLDQHGFIDVETPMLTKSTPEGARDYLVPSRVNVGCFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +      
Sbjct: 191 LPQ------SPQLFKQLLMVSGFDRYYQITRCFRDEDLRADRQPEFTQIDIETSFLQEND 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    ++IR               +N +       I+ A+A  RY +      +     
Sbjct: 245 IMDLMEDMIRRLFADV---------INVSLPDPFPRISYADAMFRYGSDKPDLRVPLELT 295

Query: 192 PDRHLLYL 199
               L+  
Sbjct: 296 ELTDLMQD 303



 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 42/136 (30%), Gaps = 5/136 (3%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
                +    + E  E              P+               ++ +++    +E+
Sbjct: 426 WQPLWVVDFPMFEWDEEEKRWQALHHPFTAPSQGHEDFLATDPGKALSRAYDMVLNGMEI 485

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLV 330
                 +     Q   F+          +E        L  L    P   GIA G DR+V
Sbjct: 486 GGGSIRIHRQDVQSKVFQALNIA----DDEAKLKFGFLLDALQYGAPPHGGIAFGLDRIV 541

Query: 331 MLVTGANNINEVIWTP 346
            ++TG ++I +VI  P
Sbjct: 542 AMMTGTDSIRDVIAFP 557


>gi|308069761|ref|YP_003871366.1| aspartyl-tRNA synthetase (aspartate--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305859040|gb|ADM70828.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 589

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 19/197 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            + +    ++ R+ +  S+R   ++  F+EI +  L   SP     ++            
Sbjct: 135 RNEKIHNNIILRSKVIQSIRRKMIDLNFLEIQTPILTSSSPEGARDYLVPSRVHPGQFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   A  + E
Sbjct: 195 LPQ------APQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMAFATQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +     N++              +  N         I   EA  +Y   D     +   
Sbjct: 249 DVFNVVENMLYEVF---------SEFTNFKISKPFTRIPYQEAMLKY-GSDKPDLRNPLI 298

Query: 191 QPDRHLLYLQAQQAGIR 207
             D   L+ +      +
Sbjct: 299 IHDVTELFTETDFKVFK 315



 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 53/177 (29%), Gaps = 15/177 (8%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              L N ++    +     ++  +       +  I    + E       I         P
Sbjct: 393 ADQLKNVEKIAGAVRNQLGKRLDLLEKDIYKFCWIVDFPMFELDPDTHKIGFSHNPFSMP 452

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK------EMQEKK 296
                             ++++    IEL +      D       FE       +++ K 
Sbjct: 453 QGGMDALLNMNPLDILAYQYDIVCNGIELSSGAVRNHDTEIMVKAFEIAGYTYGDIKSKF 512

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 +             P  +GIA G DR+VM++   +NI EVI  P +   Q+
Sbjct: 513 PALFNAFQF---------GPPPHAGIAPGIDRIVMIIANESNIREVIAFPMNSKAQD 560


>gi|238022339|ref|ZP_04602765.1| hypothetical protein GCWU000324_02246 [Kingella oralis ATCC 51147]
 gi|237866953|gb|EEP67995.1| hypothetical protein GCWU000324_02246 [Kingella oralis ATCC 51147]
          Length = 602

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 61/191 (31%), Gaps = 10/191 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHAGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNENE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +++                     +  +Y +  +      ++      D    
Sbjct: 245 IMDITEGMVKQIFHDTMNVDLGDFPRMLYSEAMFKYGS--DKPDMRVSLAFTELTDVMKT 302

Query: 192 PDRHLLYLQAQ 202
            +  +    A 
Sbjct: 303 EEFKVFRAAAD 313



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 52/189 (27%), Gaps = 5/189 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  +  +   A      +     +    + E 
Sbjct: 387 ERTGAQNGDLIFFGADKAKVVNEAIGALRIKVGHEHGAADGYFVDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P            +    + +++     E+      +     Q 
Sbjct: 447 DEEENRYTAMHHPFTSPKAGHEDLMETQPENCLARAYDMVLNGWEIGGGSIRIHRAEVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+ GA +I +VI 
Sbjct: 507 KVF----AALKITPEEQQNKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMAGAESIRDVIA 562

Query: 345 TPFSQSNQE 353
            P +Q  Q+
Sbjct: 563 FPKTQRAQD 571


>gi|260220363|emb|CBA27828.1| Aspartyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 602

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 68/197 (34%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +   +R++   N F++I++  L   +P     ++            
Sbjct: 131 RRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLTKSTPEGARDYLVPSRVHD----- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E 
Sbjct: 186 -GQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFLTEED 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +  N             + +   +  ++      N++     D    
Sbjct: 245 IRDMFQGMITTVFK--NTIGVDLGEFPVMTYQDAARLYGSDKPDLRVNLEFAELTDVMKD 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A   G RV
Sbjct: 303 VDFKVFSGAATMKGGRV 319



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+          +    + E  E +            P        +   +   ++ 
Sbjct: 425 KKNGL-FTGGWKPLWVVDFPMFEYDEESQRYTAVHHPFTAPKEGHEDWMVTAPEKCISQG 483

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     E+      +     Q+  F+      K    E        L  L    P   
Sbjct: 484 YDMVLNGWEMGGGSVRIHRADVQQKVFD----ALKITPEEAQLKFGFLLDALQYGAPPHG 539

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR+V L+TGA +I +VI  P
Sbjct: 540 GLAFGLDRIVTLMTGAESIRDVIAFP 565


>gi|322378031|ref|ZP_08052518.1| aspartate--tRNA ligase [Streptococcus sp. M334]
 gi|321281013|gb|EFX58026.1| aspartate--tRNA ligase [Streptococcus sp. M334]
          Length = 587

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 46/148 (31%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     EL      +     Q   F+      K    E        L  +    P 
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSAK----EANDQFGFLLEAMDYGFPP 522

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A+G DR VML+ G  NI EVI  P
Sbjct: 523 HGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVALPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTAVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|54308305|ref|YP_129325.1| aspartyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|62287565|sp|Q6LT53|SYD_PHOPR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46912733|emb|CAG19523.1| Putative aspartyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 597

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 52/136 (38%), Gaps = 8/136 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  EN F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDENAFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSAEQ 243

Query: 132 LMKDCMNIIRCAAEVA 147
           + +    +I    +  
Sbjct: 244 VREITEKMITEMWKEL 259



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 47/139 (33%), Gaps = 7/139 (5%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR--FELYACN 268
           D +       I     E +   N   +   + +P    A     +P       +++    
Sbjct: 421 DKSIWKPLWVIDFPMFEEDGEGNLHAMHHPFTSPLGITAEELAVNPAAANSNAYDMVING 480

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFD 327
            E+      + +   Q   F     E      E        L  L    P  +G+A G D
Sbjct: 481 YEVGGGSVRIHNADMQSAVFNILGIE----EGEQQSKFGFLLEALKYGTPPHAGLAFGLD 536

Query: 328 RLVMLVTGANNINEVIWTP 346
           RLVML+ G +NI +VI  P
Sbjct: 537 RLVMLLCGTDNIRDVIAFP 555


>gi|167752819|ref|ZP_02424946.1| hypothetical protein ALIPUT_01080 [Alistipes putredinis DSM 17216]
 gi|167659888|gb|EDS04018.1| hypothetical protein ALIPUT_01080 [Alistipes putredinis DSM 17216]
          Length = 585

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 69/199 (34%), Gaps = 23/199 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
           RRP     ++ R+ +   +R +  +  F+EI++  L   +P      R F     +    
Sbjct: 132 RRPPLQRNMILRHKMAQEIRRFLSDEGFLEIETPYLVNSTPEG---ARDFVVPSRMS--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG +K F     +R+ +     QPEFT ++   +    E +
Sbjct: 187 NQFYALPQSPQTLKQLLMVAGYDKYFQIVRCFRDEDLRADRQPEFTQIDCEMSFVEQEDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++      +           +              +   EA  +Y   D        +  
Sbjct: 247 LEIFERWAKHMFREVMGIELT---------EPLRRMPWIEAMEKY-GSDKPDLRFGMEFA 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           D   L   AQ  G  V  D
Sbjct: 297 D---LTDLAQGHGFAVFDD 312



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 45/158 (28%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    AQQ G+R         +    L E  +              P  E         
Sbjct: 404 ALRLEVAQQLGLRDPKKFAPLWVIDFPLFEWDDETQRYYAVHHPFTSPKLEDVQYLDSDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                  ++      E+      + D   Q   FE      ++ QE+       +     
Sbjct: 464 GRVRANAYDFVCNGTEIGGGSIRIHDSKLQAKMFELLGFTAEQAQERFGFLMNAFK---- 519

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   G+A GFDRL  L  G+ +I + I  P
Sbjct: 520 -----YGAPPHGGLAFGFDRLCSLFGGSESIRDYIAFP 552


>gi|328957465|ref|YP_004374851.1| aspartate--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673789|gb|AEB29835.1| aspartate--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 589

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 45/153 (29%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +       +  I    L+E  E     +        P            
Sbjct: 408 ALRSKLGKELELIDESVYAFMWIVDWPLLEYDEEAGRYSAAHHPFTMPKESDIDLLETDP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
              + + +++     EL      +     Q   F      K+    E        L  L 
Sbjct: 468 GKVYAQAYDIVLNGYELGGGSIRIHTRDLQEKMFTALGFSKE----EAEEQFGFLLEALD 523

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DR  ML+ G  NI EVI  P
Sbjct: 524 YGFPPHGGIALGLDRFAMLLAGKENIREVIAFP 556



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 61/182 (33%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R+ +  S+R Y  +  FI+ ++  L   +P     ++            
Sbjct: 135 RRPEMTQNMILRHQMTKSIRHYLDDRNFIDTETPYLTKSTPEGARDYLVPSRVHPGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    E+
Sbjct: 195 LPQ------SPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETSFLEPEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +       +              +   EA +RY   D        + 
Sbjct: 249 IQSFTEELLAKVLKDTKDVELT---------LPFPRMGYDEAISRY-GSDKPDVRFGLEL 298

Query: 192 PD 193
            D
Sbjct: 299 VD 300


>gi|317503259|ref|ZP_07961314.1| aspartate--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315665616|gb|EFV05228.1| aspartate--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 585

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 72/222 (32%), Gaps = 13/222 (5%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R +     FIE+++  L   +P      R F     +   
Sbjct: 131 LRRNAVRKNLELRHRMTILIRNFLDSQNFIEVETPILIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQDD 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + R   +                  E      ++       ++     D    
Sbjct: 246 VINLFEEMARHLFKEIRGVELPKLQQMTW--HEAMKRFGSDKPDLRFGMEFVELKDAFAG 303

Query: 192 PDRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLG 231
                ++ +A+  G        D      + +      P +G
Sbjct: 304 KGTFSVFDEAKYIGGICVPGCADYSRKQLNELTDFVKRPQVG 345



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 49/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R  +      I    L E  +    +         P P+         
Sbjct: 405 ALRLEMGDRLGLRDKNVFKCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLESQP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           +    K ++     IE+      + D   Q   FE     K++   E        +    
Sbjct: 465 EKVRAKAYDFVCNGIEVGGGSLRIHDTQLQEKMFEVLGFTKERA--EAQF--GFLMNAFK 520

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +G+A G DR V ++ G ++I + I  P
Sbjct: 521 YGAPPHAGLAFGLDRFVSILAGLDSIRDCIAFP 553


>gi|255068294|ref|ZP_05320149.1| aspartate--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255047486|gb|EET42950.1| aspartate--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 602

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 67/207 (32%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A                +   +  AEA   Y   D      N   
Sbjct: 245 IMDITEGMAKQVFQDALGVDLG----------DFPRMPYAEAMF-YYGSDKPDMRINLKF 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L    +    R A D     + 
Sbjct: 294 TELTDLMKTEEFKVFRGAADMKGGRVV 320



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 48/171 (28%), Gaps = 5/171 (2%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +   D    ++      R  + L+          +     +    + E  E         
Sbjct: 398 FFGADKAKVVNEAIGALRIKVGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDGDRWAAMH 457

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P            +    + +++     E+      +     Q   F       K
Sbjct: 458 HPFTSPKLGHEDLMASDPENCLARAYDMVLNGWEIGGGSIRIHRADVQEKVF----AALK 513

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 514 ISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|304386757|ref|ZP_07369025.1| aspartate--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304339157|gb|EFM05243.1| aspartate--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 602

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALGVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 49/182 (26%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+          +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKTKVVNEAIGALRIKVGLEHGAENGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|237749472|ref|ZP_04579952.1| aspartyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380834|gb|EEO30925.1| aspartyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 605

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 71/184 (38%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  EN FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQNNLRLRYKVAMETRKYLDENGFIDIETPMLTKSTPEGARDYLVPSRVNPGEFFA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 193 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDCEMSFVEEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +     N+IR             + ++ +  +    +T   A A+Y +   DL   L+  
Sbjct: 247 IRDLFENMIRG---------IFKKTMDVDLPNPFPVMTHELAMAKYGSDKPDLRVKLEFT 297

Query: 190 DQPD 193
           +  D
Sbjct: 298 ELTD 301



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 42/140 (30%), Gaps = 5/140 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                    +    + E  E +     C      P                +K +++   
Sbjct: 433 FDEAWAPLWVIDFPMFEYSESDNRWAACHHPFTSPKDGHEDYLESDPGRCLSKAYDMVLN 492

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             EL      +     Q   F    +  K    E        L  L    P   G+A G 
Sbjct: 493 GWELGGGSIRIHKEEVQSKVF----RALKISDTEAQEKFGFLLDALQYGAPPHGGLAFGL 548

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DRLV L+T +++I +VI  P
Sbjct: 549 DRLVTLMTRSDSIRDVIAFP 568


>gi|171778545|ref|ZP_02919672.1| hypothetical protein STRINF_00524 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282768|gb|EDT48192.1| hypothetical protein STRINF_00524 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 582

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 26/223 (11%), Positives = 69/223 (30%), Gaps = 27/223 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +       R  +  S+R Y    +FI++++  L   +P     ++            
Sbjct: 133 RRPKMLNNFKLRAKVTHSIRNYLDGLEFIDVETPMLTKSTPEGARDYLVPSRVNQGHFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT ++   +  S + 
Sbjct: 193 LPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDMETSFLSDKD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +       +              ++  +A   Y +    T  +   Q
Sbjct: 247 IQDITEGMIAKVMKDTKGIDVT---------LPFPRMSYDDAMNNYGSDKPDTRFEMLLQ 297

Query: 192 PDRHLLYL----------QAQQAGIRVAHDDTWSDIFSRILIE 224
               ++              +   ++   D        ++   
Sbjct: 298 DLTEVVKDVDFKVFSQAPVVKAIVVKGNADKYSRKNIDKLTEF 340



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  ESA       
Sbjct: 402 ALRTRIAKELDMVDNSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +   E        L  
Sbjct: 462 AKVRAVAYDIVLNGYELGGGSLRINQRELQERMF------KALGFTAEEAADQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MNYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFP 550


>gi|97197015|sp|Q5GTS0|SYD_WOLTR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 600

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 64/173 (36%), Gaps = 18/173 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + R  ++ R+ I + LR++ +E  F+EI +  L   SP     ++            
Sbjct: 146 RREKVRNNIVLRSQIIAELRKFMIEQGFLEIQTPILTASSPEGARDYLVPSRLNPGKFYA 205

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  + E
Sbjct: 206 LPQ------APQIFKQLLMISGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMSFVTQE 259

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            + +   + +       ++K                 IT  EA  +Y +    
Sbjct: 260 DVFQVIESTLYKVFAKFSRKSVDKG---------FSRITYKEAMLKYGSDKPD 303



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 59/204 (28%), Gaps = 24/204 (11%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ-------QAGIRVAHDDTWSD 216
           +              NI  G ++      +     +  +       + G+   +   +  
Sbjct: 384 KFLDDNRLNHIREATNIKPGDSVFFASDKENEAATIAGKVRTLLGSELGLIDNNIFKFCW 443

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +         + +  I+        P                  +++L    IEL +   
Sbjct: 444 VVDFPYFVYDDKSKKIDFFHNPFSMPHGGLKDLEEKNPLDILAYQYDLVCNGIELSSGAI 503

Query: 277 ELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRL 329
                      F      ++E+ +K              +      +P   GIA G DR+
Sbjct: 504 RNNKLDIMYKAFATAGYNKEEVNKKFGA----------LVRAFRFGVPPHGGIAPGIDRI 553

Query: 330 VMLVTGANNINEVIWTPFSQSNQE 353
           VML+  A NI E+   P +Q  ++
Sbjct: 554 VMLLADAPNIREITCFPMNQQGED 577


>gi|255013259|ref|ZP_05285385.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 585

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R Y  E  F+E+++  L   +P      R F     +    
Sbjct: 132 RRACVRKNLELRHRMAFEVRRYLDEQGFLEVETPVLVNSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +V     F               +T  +A  +Y   D           
Sbjct: 247 LNMFEGMAKHLFKVIRGVEFKES---------FMRMTWQDAMKQY-GSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFSVFDN 312



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 43/155 (27%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R         +    L E  E +            P P+         
Sbjct: 405 ELRLEMGNQLGLRDKDKFVCLWVIDFPLFEWNEDDQRFYAMHHPFTSPNPDDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--TYPIDEDFLAC 312
                  +++    +E+      + D   Q   F      K   + E          +  
Sbjct: 465 GAVRANAYDMVINGVEVGGGSIRIHDSQLQDKMF------KLLGFTEERAQEQFGFLMNA 518

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P   G+A G DR V L  G ++I + I  P
Sbjct: 519 FKYGAPPHGGLAYGLDRFVSLFAGLDSIRDCIAFP 553


>gi|313667849|ref|YP_004048133.1| aspartyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313005311|emb|CBN86744.1| aspartyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 602

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 64/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +       +      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGDFPRMPYSEAMFYYGS--DKPDMRIGLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 49/182 (26%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+          +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKAKVVNEAIGALRIKVGLEHGAENGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|262381384|ref|ZP_06074522.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262296561|gb|EEY84491.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 585

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R Y  E  F+E+++  L   +P      R F     +    
Sbjct: 132 RRACVRKNLELRHRMAFEVRRYLDEQGFLEVETPVLVNSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +V     F               +T  +A  +Y   D           
Sbjct: 247 LNMFEGMAKHLFKVIRGVEFKES---------FMRMTWQDAMKQY-GSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFSVFDN 312



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 43/155 (27%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R         +    L E  E +            P P+         
Sbjct: 405 ELRLEMGNQLGLRDKDKFVCLWVIDFPLFEWNEDDQRFYAMHHPFTSPNPDDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--TYPIDEDFLAC 312
                  +++    +E+      + D   Q   F      K   + E          +  
Sbjct: 465 GAVRANAYDMVINGVEVGGGSIRIHDSQLQDKMF------KLLGFTEERAQEQFGFLMNA 518

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P   G+A G DR V L  G ++I + I  P
Sbjct: 519 FKYGAPPHGGLAYGLDRFVSLFAGLDSIRDCIAFP 553


>gi|78187180|ref|YP_375223.1| aspartyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|97196773|sp|Q3B3A1|SYD_PELLD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78167082|gb|ABB24180.1| aspartyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 604

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 60/167 (35%), Gaps = 15/167 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ I +++R Y  E  FIEI +  L   SP      R F     +    
Sbjct: 146 RREKIHENIIFRSRISAAIRRYLEERDFIEIQTPILTSSSPEG---ARDFLVPSRLH--P 200

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ AG  + F  A  +R+ +      P EF  L+   A    + 
Sbjct: 201 GKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQLDMEMAFIEQDD 260

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           L +    + R   +  ++K  +              I+  E    Y 
Sbjct: 261 LFEILEGMFRHLTDTMSKKRITR--------FPFPRISYREVMDSYG 299



 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 50/146 (34%), Gaps = 5/146 (3%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
             + ++  I    + E  E    ++        P  E               ++++    
Sbjct: 434 PDELSFCWIVDFPMFEYNEDAKKVDFSHNPFSMPQGEMEALETMDPLDVLAYQYDIVCNG 493

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFD 327
           IEL +       P      FE     ++++      +    +       P   GIA G D
Sbjct: 494 IELSSGAIRNHKPEIMYKAFEIAGYSREEVDLRFGHM----IEAFKLGAPPHGGIAPGLD 549

Query: 328 RLVMLVTGANNINEVIWTPFSQSNQE 353
           RLVM++    NI EVI  P +Q  Q+
Sbjct: 550 RLVMILRDEQNIREVIAFPMNQQAQD 575


>gi|332292097|ref|YP_004430706.1| aspartyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170183|gb|AEE19438.1| aspartyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 585

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 87/288 (30%), Gaps = 12/288 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+ +   +R+Y  +  FIE+++  L   +P      R F     + +   +   
Sbjct: 138 RDSLIFRHKVALEVRKYLSDQDFIEVETPYLIKSTPEG---ARDFVVPSRMNE--GQFYA 192

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E ++    
Sbjct: 193 LPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDILNIFE 252

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            + R   +  N              +    +   +       ++ G   +     D  + 
Sbjct: 253 GLTRHLLKEVNGVEIEKFPRMLYDDA--MRLYGNDKPDIRFGMEFGELNEVAQHKDFGVF 310

Query: 198 YLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                  GI V   +        +++     P +G                 +     D 
Sbjct: 311 NNAELVVGIAVPGGNSYTRKEIDKLIDWVKRPQVGALGMVYSRCNDDGSFKSSVDKFYDQ 370

Query: 257 RFTKRFELYAC---NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
               ++           +C    E      Q      E+  +  + + 
Sbjct: 371 EDLAKWAAVTRAQKGDLICILSGETSKVRAQMSALRMELATRLGLRDP 418



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 43/157 (27%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A + G+R         +    L+E  E     +        P P          
Sbjct: 404 ALRMELATRLGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQIELLDTKP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q          E + K +            +
Sbjct: 464 GEVKANAYDLVLNGNEIGGGSIRIHDKETQAIMLRHLGFSEEEAKAQFG--------FLM 515

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   G+A G DRLV ++ G   I + I  P
Sbjct: 516 DAFEYGAPPHGGLAFGLDRLVAILGGQETIRDFIAFP 552


>gi|203284356|ref|YP_002222096.1| aspartyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|238690563|sp|B5RM04|SYD_BORDL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|201083799|gb|ACH93390.1| aspartyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 585

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 77/228 (33%), Gaps = 8/228 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               ++  ++ R+ +   +R +  +  F+E+++ +    +P      R F     I    
Sbjct: 131 RREEQKQKIILRSKVIHIIRNHLTKQDFLELETPTFVKSTPEG---ARDFLVPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   +  + AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGHFYALPQSPQIYKQLAMIAGLDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFIKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N+I    + +       +                +   RY  +    +      
Sbjct: 245 IFKLIENLIFTIFKNSLNITLPKKFKKITYKDAMNIYGSDKPDTRYELLIQDMSKALKQS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           P          +  I+       +  FSR  I  +E +  +     L 
Sbjct: 305 PFDVFKDTLQNKGTIKALIIKNQAHNFSRSKINSLEEHAKLYKARTLY 352



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 55/153 (35%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A +  +   +   +  I+   L E  E          +   P  +         
Sbjct: 404 QIRIKIATELNLINKNIFEFLWIYDFPLFEYDEDTQSYKAAHHMFSMPQAKYINTLESNP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L     EL +    +     Q+  F   +    KI  E +     FL  L 
Sbjct: 464 SEVLGEVYDLVLNGTELGSGSIRVHTKELQQRIFNI-VGFNDKIAEERFG---FFLKALE 519

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T +N+I +VI  P
Sbjct: 520 YGAPIHGGIAIGIDRLLMLMTNSNSIKDVILFP 552


>gi|227514592|ref|ZP_03944641.1| aspartate--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087003|gb|EEI22315.1| aspartate--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 591

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 17/177 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +   +L  R+ + S +  YF  N F+++++  L   +P     +I            
Sbjct: 132 RRPKMMNYLKLRSKVTSIVHNYFDNNDFLDVETPELTRSTPEGARDYIVPSRVYPGHFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+AAG +K +  A  +R+ +     QPEFT ++   +    E+
Sbjct: 192 LPQ------SPQLFKQLLMAAGVDKYYQIAKCFRDEDLRGDRQPEFTQIDTEMSFAEPEE 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +      +I+   + A               +    +   EA  +Y +    T  D 
Sbjct: 246 IQAMAEGLIKRVMKEAVGVDVP---------TPFPRMEWQEAMDKYGSDKPDTRFDM 293



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 7/150 (4%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-- 257
            A++  +   +   +  + +  + E  E                 +         DP   
Sbjct: 410 IAKELDLIDENKFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQA 469

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             + +++     E+      + DP  Q   F+     K+             +  L   M
Sbjct: 470 HAQSYDIVLNGNEIGGGSIRIHDPEVQEKVFKALGYTKEA----AQARFGFLIKALENGM 525

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DR VML+  A++I +VI  P
Sbjct: 526 PPEGGMAFGLDRWVMLLAHADSIRDVIAFP 555


>gi|221124310|ref|XP_002161330.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 604

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 68/197 (34%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +   +R++   N F++I++  L   +P     ++            
Sbjct: 133 RRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLTKSTPEGARDYLVPSRVHD----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E 
Sbjct: 188 -GQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFLTEED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +  N             + +   +  ++      N++     D    
Sbjct: 247 IRDMFQGMITTVFK--NTIGVDLGEFPVMTYQDAARLYGSDKPDLRVNLEFAELTDVMKD 304

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A   G RV
Sbjct: 305 VDFKVFSGAATMKGGRV 321



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+          +    + E  E +            P        +   +   ++ 
Sbjct: 427 KKNGL-FTGGWKPLWVVDFPMFEYDEESQRYTAVHHPFTAPKEGHEDWMVTAPEKCISQG 485

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     E+      +     Q+  F+      K    E        L  L    P   
Sbjct: 486 YDMVLNGWEMGGGSVRIHRADVQQKVFD----ALKITPEEAQLKFGFLLDALQYGAPPHG 541

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR+V L+TGA +I +VI  P
Sbjct: 542 GLAFGLDRIVTLMTGAESIRDVIAFP 567


>gi|326559889|gb|EGE10289.1| aspartyl-tRNA synthetase [Moraxella catarrhalis 7169]
          Length = 598

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 70/207 (33%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIRAFSTELIIQDH 71
                +  +  R    S++R Y  +  F+++++  L   +P     ++    T       
Sbjct: 134 RRPEMQERMKFRAKATSTIRRYLDDYGFLDVETPVLTRATPEGARDYLVPSRTRQGNFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 194 LPQ------SPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLSDEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F+ +    F     +T A+A   YA+ D          
Sbjct: 248 IMDITE----------GLTKNLFKTMLDVEFDTFPRMTYADAMRDYAS-DKPDLRIPLKL 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            D   +    +         D    + 
Sbjct: 297 IDVADIMQHVEFKVFSGPAQDPKGRVV 323



 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE---SALANIYPADPRFT 259
           + G  +            +     E     +       +P      S        +   +
Sbjct: 422 KIGTDLNLFTCEWAPLWVVDFPMFEET--DDGKWTSVHHPFTRPKGSVEELKQSPETALS 479

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
             +++     E+      +     Q   F+     K+    E     +  +  L    P 
Sbjct: 480 IAYDMVLNGTEIGGGSLRINTVDMQEAVFDALGISKE----EAELKFKFLMDALRFGAPP 535

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             G+A G DRL+ML+ GA++I +VI  P +++
Sbjct: 536 HGGLAFGLDRLIMLMVGASSIRDVIAFPKTKT 567


>gi|281206109|gb|EFA80298.1| hypothetical protein PPL_07128 [Polysphondylium pallidum PN500]
          Length = 547

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 117/337 (34%), Gaps = 40/337 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +     ++ + + +    V+ +FIEI S  L        ++  +S      ++  +  +L
Sbjct: 222 QSIFQLQSQVTNIIYNRLVKEKFIEIHSPKLLK-----WNLDNWS--SFSLNYFGETAHL 274

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCM 137
            TS     +  +A+   +IF     +R        H  EFT ++     E +   + D +
Sbjct: 275 ATSNILYKQMAIASDFNRIFEIGPIYRKEHASTHRHLCEFTRIDIEMRIEEHYHELLDQI 334

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +         K+             PE +++        +I  GT     D  D   +
Sbjct: 335 DQMFIEIFERLNKL-------------PELLSLIGQQYPSESIVYGTPPLRIDYTDAVQM 381

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI------ 251
                + G  +  DD  S    R L + I+   GI+C  I DR P+  S +  +      
Sbjct: 382 LKDLNEIG--MGADDYLSTSQERRLGQLIKSTYGIDCYMI-DRMPSDMSDVNAMPCVSNG 438

Query: 252 ----YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ---EKKKIYNETYP 304
                  D ++T  F  Y    E+      + D  + +    ++       +        
Sbjct: 439 NQRVQQNDRQYTNSFVYYIRGQEIAKGSQRIHDHNQLKLAINEQQIKYNLLRSQDEINCY 498

Query: 305 IDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
           +D  FL  L       +G ++G + L+M   G  NI 
Sbjct: 499 LD--FLGTLKYGCYPYAGCSIGLESLLMAYLGIPNIR 533


>gi|150008039|ref|YP_001302782.1| aspartyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256840784|ref|ZP_05546292.1| aspartyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298376609|ref|ZP_06986564.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|301309864|ref|ZP_07215803.1| aspartate--tRNA ligase [Bacteroides sp. 20_3]
 gi|166225371|sp|A6LBU6|SYD_PARD8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149936463|gb|ABR43160.1| aspartyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|256738056|gb|EEU51382.1| aspartyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|298266487|gb|EFI08145.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|300831438|gb|EFK62069.1| aspartate--tRNA ligase [Bacteroides sp. 20_3]
          Length = 585

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R Y  E  F+E+++  L   +P      R F     +    
Sbjct: 132 RRACVRKNLELRHRMAFEVRRYLDEQGFLEVETPVLVNSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +V     F               +T  +A  +Y   D           
Sbjct: 247 LNMFEGMAKHLFKVIRGVEFKES---------FMRMTWQDAMKQY-GSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFSVFDN 312



 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 43/155 (27%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R         +    L E  E +            P P+         
Sbjct: 405 ELRLEMGNQLGLRDKDKFVCLWVIDFPLFEWNEDDQRFYAMHHPFTSPNPDDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--TYPIDEDFLAC 312
                  +++    +E+      + D   Q   F      K   + E          +  
Sbjct: 465 GAVRANAYDMVINGVEVGGGSIRIHDSQLQDKMF------KLLGFTEERAQEQFGFLMNA 518

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P   G+A G DR V L  G ++I + I  P
Sbjct: 519 FKYGAPPHGGLAYGLDRFVSLFAGLDSIRDCIAFP 553


>gi|58584273|ref|YP_197846.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58418589|gb|AAW70604.1| Aspartyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 608

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 64/173 (36%), Gaps = 18/173 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + R  ++ R+ I + LR++ +E  F+EI +  L   SP     ++            
Sbjct: 154 RREKVRNNIVLRSQIIAELRKFMIEQGFLEIQTPILTASSPEGARDYLVPSRLNPGKFYA 213

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  + E
Sbjct: 214 LPQ------APQIFKQLLMISGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMSFVTQE 267

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            + +   + +       ++K                 IT  EA  +Y +    
Sbjct: 268 DVFQVIESTLYKVFAKFSRKSVDKG---------FSRITYKEAMLKYGSDKPD 311



 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 59/204 (28%), Gaps = 24/204 (11%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ-------QAGIRVAHDDTWSD 216
           +              NI  G ++      +     +  +       + G+   +   +  
Sbjct: 392 KFLDDNRLNHIREATNIKPGDSVFFASDKENEAATIAGKVRTLLGSELGLIDNNIFKFCW 451

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +         + +  I+        P                  +++L    IEL +   
Sbjct: 452 VVDFPYFVYDDKSKKIDFFHNPFSMPHGGLKDLEEKNPLDILAYQYDLVCNGIELSSGAI 511

Query: 277 ELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRL 329
                      F      ++E+ +K              +      +P   GIA G DR+
Sbjct: 512 RNNKLDIMYKAFATAGYNKEEVNKKFGA----------LVRAFRFGVPPHGGIAPGIDRI 561

Query: 330 VMLVTGANNINEVIWTPFSQSNQE 353
           VML+  A NI E+   P +Q  ++
Sbjct: 562 VMLLADAPNIREITCFPMNQQGED 585


>gi|269217250|ref|ZP_06161104.1| aspartate--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129387|gb|EEZ60472.1| aspartate--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 592

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 8/155 (5%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A   GI          +   +     +              P  +       P     + 
Sbjct: 422 ADALGIDREGHALLWVVDFPMFKFDEDEKKYAAEHHPFTMIPREDWDKIETDPLACG-SY 480

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI-DEDFLACLT-EMPQ 318
            +++     E+      + D   Q+         +  + +E         +  L    P 
Sbjct: 481 SYDIVMDGFEMGGGSIRIHDAELQKRVL-----ARCGVDDEDMERKFGHLIHALELGAPP 535

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             GIA+G DRLVML+ G  +I +VI  P + S  +
Sbjct: 536 HGGIALGLDRLVMLLAGKQSIRDVIAFPKTSSAAD 570



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 59/190 (31%), Gaps = 19/190 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                   +  R+++  ++R    E  FIE+++  L   +P     ++            
Sbjct: 143 RRPEMYASIKLRHIVAQAMRSALNERGFIEVETPILANSTPEGARDYLVPSRPNPGRFYA 202

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +      
Sbjct: 203 LPQ------SPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQPEFTQVDIEMSFVEETD 256

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +     A                    +   EA  R+   D        + 
Sbjct: 257 VMDMMEGVFKEVLAAAG----------VEHAFPLTRMPWKEAMDRF-GCDRPDVRFGMEL 305

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 306 VDLTDIVAGC 315


>gi|253578280|ref|ZP_04855552.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850598|gb|EES78556.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 598

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 65/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ ++ +    R++F +  F+EI++  L + +P     ++            
Sbjct: 141 RRPDLQKNIMLKSKVMMITRQFFAKEGFLEIETPMLGKSTPEGARDYLVPSRVHPGHFYG 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++    A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLYKQLLMCSGYDRYIQIARCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      +    +            + +     + IT  EA  R+   D        + 
Sbjct: 255 VIDVNERFLAYLFKEVL---------DIDVKLPIQRITWQEAMDRF-GSDKPDMRFGMEL 304

Query: 192 PD 193
            D
Sbjct: 305 HD 306



 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q  +   ++  +  +    L+E  E                 E         
Sbjct: 415 ALRLELAKQMDLLDKNEYRFVWVTEFPLLEWSEEENRFTAMHHPFTMLMEEDLPLLDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K+      +      L    
Sbjct: 475 GKVRAKAYDIVLNGNEIGGGSVRIHQDDIQERMFEALGFTKEA----AHEQFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLVMLMAKVDSIRDVIAFPKVK 566


>gi|203287890|ref|YP_002222905.1| aspartyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|238690591|sp|B5RRQ0|SYD_BORRA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|201085110|gb|ACH94684.1| aspartyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 583

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 77/228 (33%), Gaps = 8/228 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               ++  ++ R+ +   +R +  +  F+E+++ +    +P      R F     I    
Sbjct: 131 RREEQKQKIILRSKVIHIIRNHLTKQDFLELETPTFVKSTPEG---ARDFLVPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   +  + AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGHFYALPQSPQIYKQLAMIAGLDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFIKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N+I    + +       +                +   RY  +    +      
Sbjct: 245 IFKLIENLIFTIFKNSLNITLPKKFKKITYKDAMNIYGSDKPDTRYELLIQDMSKALKQS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           P          +  I+       +  FSR  I  +E +  +     L 
Sbjct: 305 PFDVFKDTLQNKGTIKALIIKNQAHNFSRSKINSLEEHAKLYKARTLY 352



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A +  +   +   +  I+   L E  E          +   P  +         
Sbjct: 404 QIRIKIATELNLINKNIFEFLWIYDFPLFEYDEDTQSYKAAHHMFSMPQAKYINTLESNP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     EL +    +     Q+  F   +    KI  E +   + FL  L 
Sbjct: 464 SKVLGEVYDIVLNGTELGSGSIRVHTKELQQRIFNI-VGFNDKIAEERF---DFFLKALE 519

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T +N+I +VI  P
Sbjct: 520 YGAPIHGGIAIGIDRLLMLMTNSNSIKDVILFP 552


>gi|187927444|ref|YP_001897931.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|309779854|ref|ZP_07674609.1| aspartate--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|187724334|gb|ACD25499.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|308921431|gb|EFP67073.1| aspartate--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 623

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 6/154 (3%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A+  G+          +    + E  E +            P  E              K
Sbjct: 438 AKSTGL-FEDAWKPLWVIDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGKCIAK 496

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            +++     E+      +     Q   F    +  K    E        L  L    P  
Sbjct: 497 AYDMVLNGWEIGGGSVRIYREEVQSKVF----RALKINDEEARAKFGFLLDALQYGAPPH 552

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            GIA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 553 GGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQD 586



 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 66/197 (33%), Gaps = 9/197 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y  +  FI+I++  L   +P     ++            
Sbjct: 148 RRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 202

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 203 -GQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLSEQE 261

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +         +                +   R   ++     D    
Sbjct: 262 IRDLFEEMIRTVFKNTMSVDLDAKFPVMEFREAMARFGSDKPDLRVK-LEFTELTDAMKD 320

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A   G RV
Sbjct: 321 VDFKVFSGPANAEGGRV 337


>gi|302342313|ref|YP_003806842.1| aspartyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638926|gb|ADK84248.1| aspartyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 595

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 63/190 (33%), Gaps = 22/190 (11%)

Query: 16  YRRRPFLL---KRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR+        R+    + R Y  +  F+E+++  L   +P     ++     +     
Sbjct: 141 LRRQVVFRNLKLRHQAAQAARGYLNDQGFLEVETPFLTKSTPEGARDYLVPSRVQRGRFY 200

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+  G E+ +     +R+ +     QPEFT ++   +     
Sbjct: 201 ALPQ------SPQLFKQLLMVGGVERYYQIVKCFRDEDLRADRQPEFTQVDLEMSFVDEN 254

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M     ++    +                      ++ A+A  R+  +D        +
Sbjct: 255 DVMDLTEGLVGAILKATRGVELG----------PVPRLSYAQAMERF-GLDAPDIRFGLE 303

Query: 191 QPDRHLLYLQ 200
             D   L  +
Sbjct: 304 LTDLGELMQK 313



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 48/153 (31%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    +++  +    D  +  +    + E        N        P  E         
Sbjct: 415 RLRLELSRRFQLTSPDDLRFCWVTDFPMFEYDPQEKRYNAMHHPFTSPKSEFEDKMGSDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           +    + ++L     E+      +  P  Q   F     +      +        L  L 
Sbjct: 475 EACLARAYDLVLNGSEVGGGSIRIHRPETQAKVFGALNID----DEQAREKFGFLLDALA 530

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A+GFDRLV ++ G  +I EVI  P
Sbjct: 531 FGAPPHGGLALGFDRLVAILAGQGSIREVIAFP 563


>gi|261366005|ref|ZP_05978888.1| aspartate--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288565412|gb|EFC86972.1| aspartate--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 602

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFQDALGVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+          +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKAKVVNEAIGALRIKVGLEHGAENGYFVDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P P          +    + +++     E+      +     Q 
Sbjct: 447 DEDGDRWAAMHHPFTSPKPGHEDLMATDPENCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|219685156|ref|ZP_03539976.1| aspartate--tRNA ligase [Borrelia garinii Far04]
 gi|219673252|gb|EED30271.1| aspartate--tRNA ligase [Borrelia garinii Far04]
          Length = 586

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 60/165 (36%), Gaps = 5/165 (3%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
               ++  +    +    A   G+   +   +  ++   L E  E          +   P
Sbjct: 393 NKKWESACKAMGQIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHMFSLP 452

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                 +     +    + ++L    +EL +    + +   Q+  F     +K+K  +  
Sbjct: 453 KKRYIASLEKTPNKTIGEIYDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSED-- 510

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 FL  L    P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 511 --RFGFFLKALEYGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 98/299 (32%), Gaps = 17/299 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + V+  F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHFIRNFLVKKNFLELETPTFVKSTPEG---ARDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +       +        +   R+       + +  + 
Sbjct: 245 IFKLIENMLFLIFKNCLNIKLPKKFKKIAYKTAMNKYGSDKPDTRFELTLKDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                      +  I++      +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 305 EFNVFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY-FTKIENNKFSG 363

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             A    T+  +L        N           E   +   +++ K         IDE+
Sbjct: 364 GIAKFLKTEEQQLIKTYSLENNDIIFFTANKKWESACKAMGQIRIKIANDL--GLIDEN 420


>gi|124515285|gb|EAY56795.1| Aspartyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 584

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 63/172 (36%), Gaps = 21/172 (12%)

Query: 18  RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RR  L K    RN +   +R Y  ++ F E+++  L   +P      +     E      
Sbjct: 134 RRETLRKSLKLRNDLTHFIRNYLHDHAFWEVETPILTRSTPEGARDFLVPSRLEKGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + +Q
Sbjct: 194 LPQ------SPQLFKQILMVGGIERYYQIARCFRDEDLRADRQPEFTQVDIEASFLTMDQ 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +     +I+   E               P      +T  EA  +Y +    
Sbjct: 248 FLYLMEGMIQSIFEKFTG---------FRPDRPFVRLTYHEAMEKYGSDKPD 290



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 47/147 (31%), Gaps = 7/147 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            +  +R   D +   +    L E  E    +         P  E             +  
Sbjct: 414 DRLKLRRPQDYSLLWVVDFPLFEWNEEENRLEALHHPFTAPRREDIPLLESDPLSVRSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL-TEMPQS 319
           ++L     E+        +P  Q   FE     K  I  E         L  L    P  
Sbjct: 474 YDLVLNGTEIGGGSVRNFEPHLQERLFE-----KIGISPESARARFGFLLDALTYGAPPH 528

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            G+A G DR VML+ G ++I +VI  P
Sbjct: 529 LGMAFGLDRFVMLLAGCDSIRDVIAFP 555


>gi|241760783|ref|ZP_04758874.1| aspartate--tRNA ligase [Neisseria flavescens SK114]
 gi|241318680|gb|EER55232.1| aspartate--tRNA ligase [Neisseria flavescens SK114]
          Length = 602

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 66/207 (31%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A                    +  AEA   Y   D      N   
Sbjct: 245 IMDITEGMAKQVFQDALGVDLGV----------FPRMPYAEAMF-YYGSDKPDIRINLKF 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L    +    R A D     + 
Sbjct: 294 TELTDLMKTEEFKVFRGAADMKGGRVV 320



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 49/171 (28%), Gaps = 5/171 (2%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +   D    ++      R  + L+          +     +    + E  E         
Sbjct: 398 FFGADKAKVVNEAIGALRIKVGLEHGAENGYFVDEWKPLWVVDFPMFEYDEDGDRWAAMH 457

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P P          +    + +++     E+      +     Q   F       K
Sbjct: 458 HPFTSPKPGHEDLMASDPENCLARAYDMVLNGWEIGGGSIRIHRADVQEKVF----AALK 513

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 514 ISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|326773284|ref|ZP_08232567.1| aspartate--tRNA ligase [Actinomyces viscosus C505]
 gi|326636514|gb|EGE37417.1| aspartate--tRNA ligase [Actinomyces viscosus C505]
          Length = 599

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 27/192 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R  +  + R     + F+EI++ +L   +P      R 
Sbjct: 120 EARLRYRYLDLRRSAMQHAIRLRAKVSQAARRVLDSHDFVEIETPTLTRSTPEG---ARD 176

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+
Sbjct: 177 FLVPARL--APGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLD 234

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + ++    +++R    + + ++ +              +T  +A  RY   D
Sbjct: 235 VEMSFVEQDDVIAVAEDVLREVWALIDYELPT----------PIARMTYRDAMERY-GSD 283

Query: 182 LGTTLDNPDQPD 193
                   +  D
Sbjct: 284 KPDLRFGCELVD 295



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 34/119 (28%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                        P PE                +++     E+      +     Q   F
Sbjct: 443 KSAWTAVHHAFTSPKPECLETFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRSDVQERVF 502

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                       E        L       P   GIA G+DR+V L+T A++I +VI  P
Sbjct: 503 NVMGI----GEQEAQEKFGFLLDAFKFGAPPHGGIAFGWDRIVSLLTRADSIRDVIAFP 557


>gi|290581365|ref|YP_003485757.1| aspartyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254998264|dbj|BAH88865.1| aspartyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 589

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 44/148 (29%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +       +  +    + E  E              P  ++             
Sbjct: 407 LAKELNLIDHSKFNFLWVVDWPMFEWSEEENRYTSAHHPFTLPQEDTVAELEGDLSKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     EL      +     Q   F+     K+             L  +    P 
Sbjct: 467 VAYDIVLNGYELGGGSLRINQRETQERMFKALGFTKES----AQKQFGFLLEAMDYGFPP 522

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A+G DR VML+ G  NI EVI  P
Sbjct: 523 HGGLALGLDRFVMLLAGKENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 19/224 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +   +R Y  +  FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLKNFKLRAKVTHVIRNYLDDLDFIDVETPMLAKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRMSRGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++ +    +I C  +              +  +        +   R+   
Sbjct: 236 DLETSFLSEQEIQEITERLIACVMKEVKGIELQLPLPQISYDTAMNNYGSDKPDTRFEMT 295

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGI-RVAHDDTWSDIFSRILI 223
               T    +   +      A +A + + A +        ++  
Sbjct: 296 LQDLTDLVKNIDFKVFSQAPAVKAIVAKNAANSYSRKAIDKLTD 339


>gi|298206975|ref|YP_003715154.1| aspartyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849609|gb|EAP87477.1| aspartyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 582

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 87/290 (30%), Gaps = 28/290 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+ +  ++R Y  +  FIE ++  L   +P      R F     + +   +   
Sbjct: 138 RENLIFRHKVTIAVRNYLSDLGFIETETPYLIKSTPEG---ARDFVVPSRMNE--GQFYA 192

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E ++    
Sbjct: 193 LPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFIDQEDILNTFE 252

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGTTLDNP 189
            +     +       +          E   +T  +A  RY          ++ G   +  
Sbjct: 253 GLTTHLLKELKGVEVT----------EFPRMTYDDAMKRYGNDKPDIRFGMEFGELNEVA 302

Query: 190 DQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
              D  +        GI V             ++     P +G      +          
Sbjct: 303 QHKDFGVFNSAELVVGIAVPGAASYTRKEIDALVNWVKRPQVGALGMVYVKCNEDGSYKS 362

Query: 249 ANIYPADPRFTKRFELYA---CNIELCNACDELLDPIEQRHRFEKEMQEK 295
           +     D     ++           +C    +      Q      EM E+
Sbjct: 363 SVDKFYDQEDLAKWAEVTGAKPGDLICVLSGDTHKVRTQLSALRMEMAER 412



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 13/164 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +R + +     +    L+E  E     +        P P          
Sbjct: 404 ALRMEMAERLELRKSDEFAPLWVIDFPLLEWDEDTKRYHAMHHPFTSPKPGQLELLETNP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q   F+       + K +            +
Sbjct: 464 GEVKANAYDLVLNGNEIGGGSIRIHDSKTQALMFDYLGFTPEEAKAQFG--------FLM 515

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  P   G+A G DRLV ++ G   I + I  P + + ++
Sbjct: 516 DAFQYGAPPHGGLAFGLDRLVAILGGQETIRDFIAFPKNNAGRD 559


>gi|260655466|ref|ZP_05860954.1| aspartate--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629914|gb|EEX48108.1| aspartate--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 602

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + + FL  R       R Y   + F+E+++ +L   +P     ++            
Sbjct: 148 RRDKMQHFLRTRAAAAHFTRNYLESHGFLEVETPTLVKSTPEGARDYLVPSRLVPGNFYA 207

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 208 LPQ------SPQIFKQLLMVSGVDRYYQLARCYRDEDLRADRQPEFTQVDLEMSFLTEED 261

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +       +    +                    + IT  EA  R+   D        + 
Sbjct: 262 IYSLLEGYVNGLWKEILGVDVP---------IPLKRITWHEAMNRF-GSDKPDMRIPFEL 311

Query: 192 PDRHLLYLQA 201
            D   ++  A
Sbjct: 312 QDLKEVFEGA 321



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 14/145 (9%)

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD--PR--FTKRFELYACNIE 270
              F  +    +      +       +P      +++   +  P     + +++    +E
Sbjct: 437 GWKFLWVTDFPMFEWSKEDNRWCAMHHPFTMPRESDLDKLETAPGEVCARAYDIVLNGVE 496

Query: 271 LCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACLT-EMPQSSGIAMGFD 327
           L      + +   Q   F      K     E    D     L  L    P   G+A+GFD
Sbjct: 497 LGGGSIRIHESSVQSRVF------KAIGLTEEAASDRFGFLLQALQFGTPPHGGLALGFD 550

Query: 328 RLVMLVTGANNINEVIWTP-FSQSN 351
           R+ ML++G  ++ +VI  P  +++ 
Sbjct: 551 RVCMLLSGGKSVRDVIAFPKTARAQ 575


>gi|24214380|ref|NP_711861.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|46577269|sp|Q8F5K1|SYD_LEPIN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|24195315|gb|AAN48879.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 601

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 72/235 (30%), Gaps = 26/235 (11%)

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA----EAFARYANIDL 182
           E Y   +         A      +             E E I+ A    E    +   D 
Sbjct: 347 EDYTAWLNRDYKAKGLAYMKHGTEGLESTITKRFKKEELEAISKACGSKEGDMLFFGADE 406

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              +++     R  L  + +       ++   + I    + E  + +   +        P
Sbjct: 407 REIVNHSLGALRLKLSERFET---PKENEINITWIVDFPMFEWNKDHKRWDALHHPFTSP 463

Query: 243 APESA------LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EM 292
           + ES             A     K ++L    +E+      +     Q   F+     E 
Sbjct: 464 SDESIPFFESMETLQKNAGNATAKAYDLVMNGVEIGGGSIRIHSREIQNKVFQILGINEE 523

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + K+K            L  L    P   G+A G DR++ML+TG  +I +VI  P
Sbjct: 524 EAKEKFG--------FLLEALEFGAPPHGGLAFGIDRMLMLLTGGKSIRDVIAFP 570



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 16/190 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  ++KR+    ++R Y  + +F+EI++  L   +P      R F     +    
Sbjct: 142 RREELKNRMIKRHEFIFAIRNYLNKRKFVEIETPILNKSTPEG---ARDFLVPSRLN--P 196

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G E+ F     +R+ +     QPEFT L+   +  S E++
Sbjct: 197 NQFYALPQSPQIFKQILMVGGMERYFQIVKCFRDEDLRADRQPEFTQLDMEFSFVSQEEI 256

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + +   ++    +            N         +T   A   Y   D           
Sbjct: 257 LSEIEGLVETIYKEV---------FNIQLSIPFPRMTYNTAMEEY-GSDKPDLRFGMKLV 306

Query: 193 DRHLLYLQAQ 202
           D   +     
Sbjct: 307 DVSEIVKDCD 316


>gi|312143968|ref|YP_003995414.1| aspartyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904619|gb|ADQ15060.1| aspartyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 591

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 19/182 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    +  R+ I  + R+Y  +N F EI++  L   +P     ++            
Sbjct: 141 RRPKMTQIVGLRHKITKATRDYLDQNGFWEIETPILTKSTPEGARDYLVPSRVNP----- 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G E+ F  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 196 -GQFFALPQSPQIFKQLLMVSGMERYFQIARCFRDEDLRANRQPEFTQIDMEMSFVNRED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +++                + +   + + ++  EA  R+   D        + 
Sbjct: 255 VFEITNGLMKKIFAEV----------DIDVPDKIKKMSYQEAMERF-GTDKPDLRFGMEL 303

Query: 192 PD 193
            D
Sbjct: 304 KD 305



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 49/158 (31%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+   +  +    +  I    L E  E              P  E         
Sbjct: 413 NLRLKIAKDFDLIPSEVYKFVWIIDFPLFEYDEEEDCFQSKHHPFAAPVDEDIDKLEKDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  ++L     EL      + +   Q+  F      EKE QEK     E +     
Sbjct: 473 ASVRADAYDLVLNGEELGGGSIRINNRPLQQKVFSVLSMSEKEQQEKFGFLLEAFD---- 528

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   GIA G DRL+M+    ++I +VI  P
Sbjct: 529 -----YGTPPHGGIAFGMDRLMMITARTDSIRDVIAFP 561


>gi|225871427|ref|YP_002747374.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254781752|sp|C0MB16|SYD_STRE4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225700831|emb|CAW95543.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 582

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 67/225 (29%), Gaps = 19/225 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R      +R Y     FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLESFKLRAKTTHVIRNYLDNLGFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRISQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +                     +    +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMIAKVMKDTKGIEVKLPFPRMAYDDAMNHYGSDKPDTRFDML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T    +   +     QA +   ++   D        ++   
Sbjct: 296 LQDLTDLVKEIDFKVFSEAQAVKAIVVKGHADRYSRKDIDKLTEF 340



 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  ESA       
Sbjct: 402 ALRTRIAKELDMIDMSQFNFLWVVDWPMFEWSEEEERYMSAHHPFTLPTAESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      +   +   E        L  
Sbjct: 462 AKVRAVAYDIVLNGYELGGGSLRINQKDMQERMF------RALGFTAEEANEQFGFLLEA 515

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DRLVML+ G +NI EVI  P
Sbjct: 516 MEYGFPPHGGLAIGLDRLVMLLAGKDNIREVIAFP 550


>gi|148381005|ref|YP_001255546.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153931829|ref|YP_001385376.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153936865|ref|YP_001388783.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166225338|sp|A7FY03|SYD_CLOB1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225339|sp|A5I6D5|SYD_CLOBH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148290489|emb|CAL84617.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152927873|gb|ABS33373.1| aspartyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932779|gb|ABS38278.1| aspartate--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 593

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 66/194 (34%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +   + R+     +R++  EN F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 KGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQPEFTQIDMELSFVEEDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +                    E     +   R+  +++    +    
Sbjct: 253 VIELNERLLAKVFKEVGGIDVKLPIERMPYKIAMEKYGSDKPDLRF-GMEINDLTEAVKN 311

Query: 192 PDRHLLYLQAQQAG 205
            +  +     +  G
Sbjct: 312 SEFKVFKGAIEAGG 325



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 49/150 (32%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-- 257
            A++  I   ++  +  I    L+   E             + A       +   +P   
Sbjct: 417 IAKELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHP--FTAIMDEDIELLGTEPGKV 474

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             K +++     EL      + D   Q   F      K+K     +      L       
Sbjct: 475 RAKAYDIVLNGEELGGGSIRIHDSKFQEKMFSVLGFTKEK----AWERFGFLLEAFKFGP 530

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DR++M + G  NI +VI  P
Sbjct: 531 PPHGGLAYGLDRMIMFLAGTENIKDVITFP 560


>gi|330975331|gb|EGH75397.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 306

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 51/162 (31%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N              P          
Sbjct: 122 EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFTALHHPFTAPKCTPEELEAN 181

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 182 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 236

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 237 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 278


>gi|260590987|ref|ZP_05856445.1| aspartate--tRNA ligase [Prevotella veroralis F0319]
 gi|260536852|gb|EEX19469.1| aspartate--tRNA ligase [Prevotella veroralis F0319]
          Length = 585

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 74/221 (33%), Gaps = 10/221 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +    +F+E+++  L   +P      R F     +    
Sbjct: 132 RREAVRKNLELRHRMTILIRNFLDSQKFMEVETPILIGSTPEG---ARDFVVPSRM--TP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + R               +    + E      ++       ++    +D     
Sbjct: 247 INLFEEMARHLFREIRG--VELPKLEQMTWHEAMKRFGSDKPDLRFGMEFVELIDELKGT 304

Query: 193 DRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLG 231
               ++ +A+  G  V     D      + +      P +G
Sbjct: 305 GSFSVFDEAKYIGGIVVPGCADYSRKQLNELTDFVKRPQVG 345



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 8/137 (5%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
                I   +     E    +            +  L + +P   R  K ++     IE+
Sbjct: 423 KCLWIIDFPLFEWSDEEQRLMATHHPFTMPNLDDIPLLDEHPEQVR-AKAYDFVCNGIEV 481

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL-TEMPQSSGIAMGFDRL 329
                 + D   Q   FE           E       FL        P  +G+A G DR 
Sbjct: 482 GGGSLRIHDTQLQEKMFEVL-----GFTPERAEAQFGFLMNAFKYGAPPHAGLAFGLDRF 536

Query: 330 VMLVTGANNINEVIWTP 346
           V ++ G ++I + I  P
Sbjct: 537 VSILAGLDSIRDCIAFP 553


>gi|153862539|gb|ABS52743.1| putative lysyl-tRNA synthetase [Theileria uilenbergi]
          Length = 68

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               +E  P DE F   L   +P + G  MG DRL M ++  NNI EVI+ P  +   +
Sbjct: 3   DLGDDEAQPPDESFCTALEYGLPPTGGWGMGIDRLTMFLSDKNNIKEVIFFPTMRPIAD 61


>gi|28378622|ref|NP_785514.1| aspartyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|308180778|ref|YP_003924906.1| aspartyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258331|sp|Q88VQ8|SYD_LACPL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28271458|emb|CAD64363.1| aspartate--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|308046269|gb|ADN98812.1| aspartyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 598

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 49/154 (31%), Gaps = 7/154 (4%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +       +  +    L E  E              P  E         D
Sbjct: 410 LRTAIAKELDLIDQDQYAYLWVVDWPLFEYDEGIERWVPAHHPFTMPNEEDVHYLNDGED 469

Query: 256 PR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           P     + +++     EL      +     Q   F+     K++            L  L
Sbjct: 470 PHKAHAQSYDIILNGYELGGGSIRIHTRELQEKMFKALDFTKER----AQEQFGFLLDAL 525

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A+G DR  ML++G +NI EVI  P
Sbjct: 526 DMGFPPHGGLAIGLDRFAMLLSGNDNIREVIAFP 559



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 66/190 (34%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  RN I  ++  YF  N F +I++  L   +P     ++            
Sbjct: 134 RRPEMQRGLKIRNGITQAVHSYFDANGFYDIETPFLTKSTPEGARDYLVPSRVYQGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  + E+
Sbjct: 194 LPQ------SPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQPEFTQIDMETSFLTAEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I+   +                 +    +T  EA  R+   +        + 
Sbjct: 248 IQSYTEGLIKQVMKDVKGVDIK---------TPFTRMTWQEAMDRF-GSEKPDVRFGMEL 297

Query: 192 PDRHLLYLQA 201
            D  +    A
Sbjct: 298 KDMGVAVSNA 307


>gi|325568593|ref|ZP_08144886.1| aspartate--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325157631|gb|EGC69787.1| aspartate--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 591

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 65/188 (34%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              +    ++ R     ++R +   N F++I++  L + +P     ++            
Sbjct: 135 RRPKMTNNIVMRAKTTQAIRNFLDTNDFLDIETPYLGKSTPEGARDYLVPSRIYPGHFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQIFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQVDIETSFLTAEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++            +              +T  EA  RY   D   T  + + 
Sbjct: 249 IQTYTEELLAKVMREVKGIEVT---------LPFPRMTYDEAMGRY-GSDKPDTRFDMEL 298

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 299 IDLSEVVK 306



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 45/153 (29%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     ++ G+       +  +      E  E              P            
Sbjct: 408 AIRNKLGKELGLIDESKFNFLWVTDWPQFEYDEEAGRYVSAHHPFTLPKESDLPLLTTDP 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
              + + +++     EL      +     Q   FE      +    E        L  L 
Sbjct: 468 SKVYAQAYDIVLNGYELGGGSLRIHTREVQEQMFEALGFSCR----EMQNQFGFLLDALD 523

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRLVML+ G  NI EVI  P
Sbjct: 524 YGFPPHGGIALGLDRLVMLLAGEENIREVIAFP 556


>gi|322807355|emb|CBZ04929.1| aspartyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 593

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 66/194 (34%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +   + R+     +R++  EN F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 KGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQPEFTQIDMELSFVEEDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +                    E     +   R+  +++    +    
Sbjct: 253 VIELNERLLTKVFKEVGGIDVKLPIERMPYKIAMEKYGSDKPDLRF-GMEINDLTEAVKN 311

Query: 192 PDRHLLYLQAQQAG 205
            +  +     +  G
Sbjct: 312 SEFKVFKGAIEAGG 325



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 49/150 (32%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-- 257
            A++  I   ++  +  I    L+   E             + A       +   +P   
Sbjct: 417 IAKELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHP--FTAIMDEDIELLDTEPGKV 474

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             K +++     EL      + D   Q   F      K+K     +      L       
Sbjct: 475 RAKAYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEK----AWERFGFLLEAFKFGP 530

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DR++M + G  NI +VI  P
Sbjct: 531 PPHGGLAYGLDRMIMFLAGTENIKDVITFP 560


>gi|24380434|ref|NP_722389.1| aspartyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|46577480|sp|Q8DRV9|SYD2_STRMU RecName: Full=Aspartyl-tRNA synthetase 2; AltName:
           Full=Aspartate--tRNA ligase 2; Short=AspRS 2
 gi|24378460|gb|AAN59695.1|AE015031_11 aspartyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 589

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 44/148 (29%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +       +  +    + E  E              P  ++             
Sbjct: 407 LAKELNLIDHSKFNFLWVVDWPMFEWSEEENRYTSAHHPFTLPQEDTVAELEGDLSKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     EL      +     Q   F+     K+             L  +    P 
Sbjct: 467 VAYDIVLNGYELGGGSLRINQRETQERMFKALGFTKES----AQKQFGFLLEAMDYGFPP 522

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A+G DR VML+ G  NI EVI  P
Sbjct: 523 HGGLALGLDRFVMLLAGKENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 19/224 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R  +   +R Y  +  FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLKNFKLRAKVTHVIRNYLDDLDFIDVETPMLAKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRMSRGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++ +    +I C  +              +  +        +   R+   
Sbjct: 236 DLETSFLSEQEIQEITERLIACVMKEVKGIELQLPLPQISYDTAMNNYGSDKPDTRFEMT 295

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGI-RVAHDDTWSDIFSRILI 223
               T    +   +      A +A + + A +        ++  
Sbjct: 296 LQDLTDLVKNIDFKVFSQAPAVKAIVAKNAANSYSRKAIDKLTD 339


>gi|330818289|ref|YP_004361994.1| Aspartyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370682|gb|AEA62038.1| Aspartyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 600

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  E  +           P  E              K +
Sbjct: 424 KANGLVESGWKPLWVIDFPMFEYDEDEVRYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIFQEDVQSKVF----RALKIGPEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 62/198 (31%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPHMQNNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +                          +   R   ++     D    
Sbjct: 247 IRDLFEEMIRHVFKKTIGVELDASFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            +  +    A     RVA
Sbjct: 306 VEFKVFSTPANSKDGRVA 323


>gi|254556837|ref|YP_003063254.1| aspartyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300768150|ref|ZP_07078055.1| aspartate--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|254045764|gb|ACT62557.1| aspartyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|300494214|gb|EFK29377.1| aspartate--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 598

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 49/154 (31%), Gaps = 7/154 (4%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +       +  +    L E  E              P  E         D
Sbjct: 410 LRTAIAKELDLIDQDQYAYLWVVDWPLFEYDEGIERWVPAHHPFTMPNEEDVHYLNDGED 469

Query: 256 PR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           P     + +++     EL      +     Q   F+     K++            L  L
Sbjct: 470 PHKAHAQSYDIILNGYELGGGSIRIHTRELQEKMFKALDFTKER----AQEQFGFLLDAL 525

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A+G DR  ML++G +NI EVI  P
Sbjct: 526 DMGFPPHGGLAIGLDRFAMLLSGNDNIREVIAFP 559



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 63/180 (35%), Gaps = 17/180 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  RN I  ++  YF  N F +I++  L   +P     ++            
Sbjct: 134 RRPEMQRGLKIRNGITQAVHSYFDANGFYDIETPFLTKSTPEGARDYLVPSRVYQGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  + E+
Sbjct: 194 LPQ------SPQLFKQLLMGAGFDRYYQIARCFRDEDLRGDRQPEFTQIDMETSFLTAEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I+   +                 +    +T  EA  R+ +           +
Sbjct: 248 IQSYTEGLIKQVMKDVKGVDIK---------TPFTRMTWQEAMDRFGSEKPDVRFGMELK 298


>gi|184155309|ref|YP_001843649.1| aspartyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|238692970|sp|B2GBY7|SYD_LACF3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|183226653|dbj|BAG27169.1| aspartyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 591

 Score = 99.7 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 17/177 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +   +L  R+ + S +  YF  N F+++++  L   +P     +I            
Sbjct: 132 RRPKMMNYLKLRSKVTSIVHNYFDNNDFLDVETPELTRSTPEGARDYIVPSRVYPGHFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+AAG +K +  A  +R+ +     QPEFT ++   +    E+
Sbjct: 192 LPQ------SPQLFKQLLMAAGVDKYYQIAKCFRDEDLRGDRQPEFTQIDTEMSFAEPEE 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +      +I+   + A               +    +   EA  +Y +    T  D 
Sbjct: 246 IQAMAEGLIKRVMKEAVGVDVP---------TPFPRMEWQEAMDKYGSDKPDTRFDM 293



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 7/150 (4%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-- 257
            A++  +   +   +  + +  + E  E                 +         DP   
Sbjct: 410 IAKELDLIDENKFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQA 469

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             + +++     E+      + DP  Q   F+     K+             +  L   M
Sbjct: 470 HAQSYDIVLNGNEIGGGSIRIHDPEVQEKVFKALGYTKEA----AQARFGFLIKALENGM 525

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DR VML+  A++I +VI  P
Sbjct: 526 PPEGGMAFGLDRWVMLLAHADSIRDVIAFP 555


>gi|153938160|ref|YP_001392332.1| aspartyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|170756537|ref|YP_001782689.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|166225340|sp|A7GHS2|SYD_CLOBL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229559868|sp|B1IMD7|SYD_CLOBK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|152934056|gb|ABS39554.1| aspartate--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|169121749|gb|ACA45585.1| aspartyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|295320325|gb|ADG00703.1| aspartate--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 593

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 66/194 (34%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +   + R+     +R++  EN F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 KGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQPEFTQIDMELSFVEEDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +                    E     +   R+  +++    +    
Sbjct: 253 VIELNERLLAKVFKEVGGIDVKLPIERMPYKIAMEKYGSDKPDLRF-GMEINDLTEAVKN 311

Query: 192 PDRHLLYLQAQQAG 205
            +  +     +  G
Sbjct: 312 SEFKVFKGAIEAGG 325



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 49/150 (32%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-- 257
            A++  I   ++  +  I    L+   E             + A       +   +P   
Sbjct: 417 IAKELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHP--FTAIMDEDIELLDTEPGKV 474

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             K +++     EL      + D   Q   F      K+K     +      L       
Sbjct: 475 RAKAYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEK----AWERFGFLLEAFKFGP 530

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DR++M + G  NI +VI  P
Sbjct: 531 PPHGGLAYGLDRMIMFLAGTENIKDVITFP 560


>gi|315651809|ref|ZP_07904813.1| aspartate--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485939|gb|EFU76317.1| aspartate--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 594

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 69/182 (37%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ + ++ R +  EN F+EI++ +L   SP     ++            
Sbjct: 141 RRPDLQRNLMVRSKVATTTRNFLAENGFLEIETPTLIKSSPEGARDYLVPSRVYPGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMVSGYDRYFQLARCYRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++   +            + +     + +T  EA  R+   D        + 
Sbjct: 255 VLDVNERLLQRLFKDVL---------DIDIKLPIQRMTWQEAMDRF-GSDKPDLRFGMEL 304

Query: 192 PD 193
            D
Sbjct: 305 KD 306



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 52/159 (32%), Gaps = 11/159 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A Q G+    D  +  +    L+E  +              P  E         
Sbjct: 415 ALRVELANQLGLLKKDDYRFLWVTQFPLLEWSDEENRFKAMHHPFTAPMDEDWQYIDSDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                K +++     E+      +     Q   F         +       DE F   L 
Sbjct: 475 GRVRAKAYDIVLNGTEIGGGSVRIHQADIQSKMF-------DVLGLSKEVADERFGYLLE 527

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                +P  +G+A G DR+VML+ GA++I +VI  P  +
Sbjct: 528 AFKYGVPPHAGLAYGLDRVVMLMVGADSIRDVIAFPKVK 566


>gi|269126358|ref|YP_003299728.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268311316|gb|ACY97690.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 436

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 54/317 (17%), Positives = 93/317 (29%), Gaps = 37/317 (11%)

Query: 9   WWNRDFHYR--RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           W   D   R   R     +   ++ LREY     F E+ +  L  +  +E+    F    
Sbjct: 118 WRFLDIRLRPSSRLLFDVQTTFEAGLREYAYAEGFTEMHTPKLMGTA-SESGAEVFK--- 173

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
               +     YL  SP+F  +  +AAG E++F     +R        H  EFT ++   A
Sbjct: 174 --LGYFGGDAYLAQSPQFYKQMAVAAGIERVFEIGPVFRAEPSFTSRHATEFTGVDVEMA 231

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
                + +      +   A      +                    EA   +  +DL   
Sbjct: 232 WIDDVEDVMAFEERMLAHAIAKVADV------------------HGEAIREHYGVDLKVP 273

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                +          +  G   A +    D      I         +    +  YPA  
Sbjct: 274 TVPFPRLTMAEAQEILRARGWDPAGEKEDLDPEGERAISAHIAEQTGHEFVFITHYPASI 333

Query: 246 SALANIYPAD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
               ++ P D P  T  F+L    +E+                   +  EK     +T P
Sbjct: 334 RPFYHMRPKDRPDLTLSFDLLWKGLEVTTGAQREHRYDVLCK----QAAEK---GLDTAP 386

Query: 305 IDEDFLACLT-EMPQSS 320
           + +D++       P   
Sbjct: 387 M-QDYMNIFRFGTPPHG 402


>gi|260662177|ref|ZP_05863073.1| aspartyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260553560|gb|EEX26452.1| aspartyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 591

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 17/177 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +   +L  R+ + S +  YF  N F+++++  L   +P     +I            
Sbjct: 132 RRPKMMNYLKLRSKVTSIVHNYFDNNDFLDVETPELTRSTPEGARDYIVPSRVYPGHFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+AAG +K +  A  +R+ +     QPEFT ++   +    E+
Sbjct: 192 LPQ------SPQLFKQLLMAAGVDKYYQIAKCFRDEDLRGDRQPEFTQIDTEMSFAEPEE 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +      +I+   + A               +    +   EA  +Y +    T  D 
Sbjct: 246 IQAMAEGLIKRVMKEAVGVDVP---------TPFPRMEWQEAMDKYGSDKPDTRFDM 293



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 7/150 (4%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-- 257
            A++  +   +   +  + +  + E  E                 +         DP   
Sbjct: 410 IAKELDLIDENKFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQA 469

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             + +++     E+      + DP  Q   F+     K+             +  L   M
Sbjct: 470 HAQSYDIVLNGNEIGGGSIRIHDPEVQEKVFKALGYTKEA----AQARFGFLIKALENGM 525

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DR VML+  A++I +VI  P
Sbjct: 526 PPEGGMAFGLDRWVMLLAHADSIRDVIAFP 555


>gi|45657956|ref|YP_002042.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798555|sp|Q72QK5|SYD_LEPIC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|45601197|gb|AAS70679.1| aspartyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 601

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 72/235 (30%), Gaps = 26/235 (11%)

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA----EAFARYANIDL 182
           E Y   +         A      +             E E I+ A    E    +   D 
Sbjct: 347 EDYTAWLNRDYKAKGLAYMKHGTEGLESTITKRFKKEELEAISKACGSKEGDMLFFGADE 406

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              +++     R  L  + +       ++   + I    + E  + +   +        P
Sbjct: 407 REIVNHSLGALRLKLSERFET---PKENEINITWIVDFPMFEWNKDHKRWDALHHPFTSP 463

Query: 243 APESA------LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEM 292
           + ES             A     K ++L    +E+      +     Q   F+     E 
Sbjct: 464 SDESIPFFESMETLQKNAGNATAKAYDLVMNGVEIGGGSIRIHSKEIQNKVFQVLGINEE 523

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + K+K            L  L    P   G+A G DR++ML+TG  +I +VI  P
Sbjct: 524 EAKEKFG--------FLLEALEFGAPPHGGLAFGIDRMLMLLTGGKSIRDVIAFP 570



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 16/190 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  ++KR+    ++R Y  + +F+EI++  L   +P      R F     +    
Sbjct: 142 RREELKNRMIKRHEFIFAIRNYLNKRKFVEIETPILNKSTPEG---ARDFLVPSRLN--P 196

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G E+ F     +R+ +     QPEFT L+   +  S E++
Sbjct: 197 NQFYALPQSPQIFKQILMVGGMERYFQIVKCFRDEDLRADRQPEFTQLDMEFSFVSQEEI 256

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + +   ++    +            N         +T   A   Y   D           
Sbjct: 257 LSEIEGLVETIYKEV---------FNIQLSIPFPRMTYNTAMEEY-GSDKPDLRFGMKLV 306

Query: 193 DRHLLYLQAQ 202
           D   +     
Sbjct: 307 DVSEIVKDCD 316


>gi|329850487|ref|ZP_08265332.1| aspartyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328840802|gb|EGF90373.1| aspartyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 598

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 69/212 (32%), Gaps = 30/212 (14%)

Query: 4   IPSQPWWNRD----FHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D       +      RR  L    + R+ +  S+R   V   F+E  +  L
Sbjct: 110 LPLPVFGEPDYPEEVRLKNRFLDLRRETLHKNIVLRSKVIQSIRNRMVGQGFLEYQTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     +        Y L  +P+   + L+ +G ++ F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRMH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDE 223

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +       EF  L+   +  +         ++      V +     F +         + 
Sbjct: 224 DLRADRSLEFYQLDVEMSFVT-------QEDVFAAIEPVIHGLFTEFGDGKRVSSYPFQR 276

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I   E+ A+Y   D     +  +  D  + + 
Sbjct: 277 IPYKESIAKY-GSDKPDLRNPIEMQDVSVHFA 307



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 48/157 (30%), Gaps = 15/157 (9%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
             G+       +  I    + E  +    I+        P  E               ++
Sbjct: 423 DLGLVDEDQFRFCWIVDFPMFEWNDEEKKIDFSHNPFSMPQGEMEALLTKDPREILAYQY 482

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE-----KEMQEKKKIYNETYPIDEDFLACL-TEM 316
           ++     ELC+              FE      ++ E +             L       
Sbjct: 483 DIVCNGYELCSGAIRNHKQEIMLKAFEIAGYGHDVVESQFGGM---------LNAFKYGA 533

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G+A G DR+VML+ G   I EVI  P +Q  Q+
Sbjct: 534 PPHGGLAPGIDRIVMLLAGQTAIREVIAFPLNQQGQD 570


>gi|241661974|ref|YP_002980334.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240864001|gb|ACS61662.1| aspartyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 623

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 6/154 (3%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A+  G+          +    + E  E +            P  E              K
Sbjct: 438 AKSTGL-FEDAWKPLWVIDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGKCIAK 496

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            +++     E+      +     Q   F    +  K    E        L  L    P  
Sbjct: 497 AYDMVLNGWEIGGGSVRIYREEVQSKVF----RALKINDEEARAKFGFLLDALQYGAPPH 552

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            GIA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 553 GGIAFGLDRVVTMMAGADSIRDVIAFPKTQRAQD 586



 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 66/197 (33%), Gaps = 9/197 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y  +  FI+I++  L   +P     ++            
Sbjct: 148 RRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 202

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 203 -GQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLSEQE 261

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +         +                +   R   ++     D    
Sbjct: 262 IRDLFEEMIRTVFKNTMSVELDAKFPVMEFREAMARFGSDKPDLRVK-LEFTELTDAMKD 320

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A   G RV
Sbjct: 321 VDFKVFSGPANAEGGRV 337


>gi|51598701|ref|YP_072889.1| aspartyl-tRNA synthetase [Borrelia garinii PBi]
 gi|62287544|sp|Q661H4|SYD_BORGA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|51573272|gb|AAU07297.1| aspartyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 586

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 5/165 (3%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
               +   +    +    A   G+   +   +  ++   L E  E          +   P
Sbjct: 393 NKKWETACKAMGQIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHMFSLP 452

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                 +     +    + ++L    +EL +    + +   Q+  F     +K+K  +  
Sbjct: 453 KKRYIASLEKIPNKTIGEIYDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSED-- 510

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 FL  L    P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 511 --RFGFFLKALEYGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 77/217 (35%), Gaps = 12/217 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + V+ +F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHLIRNFLVKKKFLELETPTFVKSTPEG---ARDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +       +        +   R+       + +  + 
Sbjct: 245 IFKLIENMLFLIFKNCLNIKLPKKFKKITYKTAMNKYGSDKPDTRFELTLQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
                      +  I++      +D FSR  I  +E 
Sbjct: 305 EFNVFKETLKNKGSIKILIVKDEADKFSRAKINNLEE 341


>gi|315924153|ref|ZP_07920379.1| aspartate--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622555|gb|EFV02510.1| aspartate--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 593

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 7/161 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G  ++    +  +    L+E                 P  E         
Sbjct: 412 QLRLELAKRLGFDLSDQFKFLWVIDFPLLEYDAEQGRYVAVHHPFTAPLDEDIPLLDTAP 471

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
           +   +  +++    +EL      + +   Q   F+        +  ET      FL   L
Sbjct: 472 EKVRSDAYDMVVNGVELGGGSIRIHNGDIQDKMFKALN-----LNEETVQTQFGFLMEAL 526

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   G+A GFDRL+M++   +NI +VI  P +Q++ +
Sbjct: 527 KYGTPPHGGLAFGFDRLIMMLLDLDNIRDVIAFPKTQNHSD 567



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
              + +  L+ R    S +R+Y     F EI++  L + +P      R F     +Q   
Sbjct: 138 RKPKNQKILMTRARAASIVRDYLNHEGFCEIETPILGKTTPEG---ARDFLVPSRVQK-- 192

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +  + + +
Sbjct: 193 GNFFGLPQSPQLFKQILMISGMDRYYQIAKCFRDEDLRQDRQPEFTQIDMEMSFVTKDDI 252

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    +                      +T  EA  R+   D        +  
Sbjct: 253 MPIMEGMIAQVFKEIRGVELE---------RPFPRMTWQEAMDRF-GSDKPDMRFGMEL- 301

Query: 193 DRHLLYLQAQQAGIRVAHD 211
             H L    + +  +V  D
Sbjct: 302 --HNLSDILKDSDFKVFSD 318


>gi|209519041|ref|ZP_03267849.1| aspartyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209500553|gb|EEA00601.1| aspartyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 599

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y  E  FI+I++  L   +P     ++    T       
Sbjct: 133 RRPQMQHNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRTNP----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLSEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +         +                +   R   ++     D    
Sbjct: 247 IRDLFEAMIRHVFKTTIGVQLDEKFPVMEYAEAMRRFGSDKPDLRVK-LEFTELTDAMRD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANTKDGRVA 323



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  E +            P  E              K +
Sbjct: 424 KANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIYREEVQSKVF----RALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571


>gi|324993494|gb|EGC25414.1| aspartate--tRNA ligase [Streptococcus sanguinis SK405]
          Length = 578

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 7/131 (5%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
           F  ++   +              +P  +    +    D   +  +++     E+      
Sbjct: 423 FLWVVDWPLLEWNEDQNRYQAMHHPFTQGIFEDGQEPDQFRSHAYDIVLNGYEIGGGSLR 482

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
           + +   Q   FE        +  E Y  D   FL  L    P   G+A+G DRLVM++ G
Sbjct: 483 IHNRKAQEAMFE-----LLGMSWEDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAG 537

Query: 336 ANNINEVIWTP 346
             NI +VI  P
Sbjct: 538 EENIRQVIAFP 548



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 80/238 (33%), Gaps = 21/238 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     +    
Sbjct: 131 RREKMTHNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +              I+  EA +R+   D   T    +  
Sbjct: 246 RALVEAMLKAVVKKTHGLELTED---------FPTISYEEAMSRF-GSDKPDTRFGLELK 295

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           +   L        I+ A D+        ++   I           L  Y         
Sbjct: 296 NLTDLCQSNDSLLIKKALDN-----QEEVMGICIPDAASAFSKKQLSHYYQEMKEFGC 348


>gi|331002008|ref|ZP_08325528.1| aspartyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411804|gb|EGG91209.1| aspartyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 594

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 69/182 (37%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ + ++ R +  EN F+EI++ +L   SP     ++            
Sbjct: 141 RRPDLQRNLMVRSKVATTTRNFLAENGFLEIETPTLIKSSPEGARDYLVPSRVYPGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMVSGYDRYFQLARCYRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++   +            + +     + +T  EA  R+   D        + 
Sbjct: 255 VLDVNERLLQRLFKDVL---------DIDVSLPIQRMTWQEAMDRF-GSDKPDLRFGMEL 304

Query: 192 PD 193
            D
Sbjct: 305 KD 306



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A Q G+    D  +  +    L+E  E              P  E         
Sbjct: 415 ALRVELASQLGLLKKDDYKFLWVTQFPLLEWSEEENRFKAMHHPFTAPMDEDWQYIDSDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     K+             L    
Sbjct: 475 GRVRAKAYDIVLNGTEIGGGSVRIHQGDVQAKMFEVLGLIKEV----AQERFGYLLEAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DR+VML+  A++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRVVMLMVEADSIRDVIAFPKVK 566


>gi|269977312|ref|ZP_06184285.1| aspartyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269934615|gb|EEZ91176.1| aspartyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 595

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 19/172 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RRR     L+ R  I S  R    +++F+EI++ +L   +P      R F     I   
Sbjct: 130 LRRRQLHDNLVLRAKISSVARRVMEKHEFLEIETPTLTRSTPEGA---RDFVVPARI--K 184

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   +    + 
Sbjct: 185 PGSWYALPQSPQLFKQLLMVGGMERYYQLARCYRDEDSRADRQPEFTQLDLEMSFVDQDD 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +M    ++++    V    + +              +   EA  +Y +    
Sbjct: 245 VMAVTEDLLKEVWAVIGYDLKT----------PIPRMPFKEAMDKYGSDKPD 286



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 11/113 (9%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
             + +P+    + +  DP       +++    +EL      +     Q   F      K 
Sbjct: 451 HAFTSPKPECMDTFDTDPGSALAYAYDIVCNGVELGGGSIRVHRRDVQERIF------KV 504

Query: 297 KIY--NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +   E        L       P   G+A+G+DR+  ++T + +I +VI  P
Sbjct: 505 MGFSPEEAQARFGFLLDAFKYGAPPHGGLALGWDRIAGMLTASPSIRDVIAFP 557


>gi|320534371|ref|ZP_08034857.1| aspartyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320133413|gb|EFW25875.1| aspartyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 566

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 67/192 (34%), Gaps = 27/192 (14%)

Query: 13  DFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R  +  + R     + F+EI++ +L   +P      R 
Sbjct: 87  EARLRYRYLDLRRSAMQHTIRLRAKVSQAARRVLDSHDFVEIETPTLTRSTPEG---ARD 143

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+
Sbjct: 144 FLVPARL--APGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLD 201

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + ++    +++R    +           + +  +    +T  +A  +Y   D
Sbjct: 202 VEMSFVEQDDVIAVAEDVLREVWALI----------DYDLPTPIARMTYRDAMEKY-GSD 250

Query: 182 LGTTLDNPDQPD 193
                   +  D
Sbjct: 251 KPDLRFGCELVD 262



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 34/119 (28%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                        P PE                +++     E+      +     Q   F
Sbjct: 410 KSAWTAVHHAFTSPKPECLETFDTDPGGALAYAYDIVCNGNEIGGGSIRIHRSDVQERVF 469

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                       E        L       P   GIA G+DR+V L+T A++I +VI  P
Sbjct: 470 NVMGI----GEQEAQEKFGFLLDAFKFGAPPHGGIAFGWDRIVSLLTRADSIRDVIAFP 524


>gi|218259683|ref|ZP_03475326.1| hypothetical protein PRABACTJOHN_00985 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224954|gb|EEC97604.1| hypothetical protein PRABACTJOHN_00985 [Parabacteroides johnsonii
           DSM 18315]
          Length = 585

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 22/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R Y  +  F+E+++  L   +P      R F     +   
Sbjct: 131 LRRNAVRKNLELRHRMAFEVRNYLDKQGFLEVETPVLVNSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +V                     I+  +A  +Y   D      +   
Sbjct: 246 VLNIFEGMAKHLFKVIRGVDIK---------EAFPRISWHDAM-KYYGSDKPDLRFDMKF 295

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  +
Sbjct: 296 VE---LMDIMKGHGFSVFDN 312



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A Q G+R  +      +    L E  E +            P PE         
Sbjct: 405 ELRLEVAGQLGLRDKNKFACLWVIDFPLFEWSEEDQRFYAMHHPFTSPKPEDIPLLDSDT 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++    +E+      + D   Q   F    Q       +        +    
Sbjct: 465 GAVRANAYDMVINGVEVGGGSIRIHDSKLQDKMF----QLLGFTEEKAQERFGFLMNAFK 520

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DR V L  G ++I + I  P
Sbjct: 521 YGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|187778365|ref|ZP_02994838.1| hypothetical protein CLOSPO_01957 [Clostridium sporogenes ATCC
           15579]
 gi|187771990|gb|EDU35792.1| hypothetical protein CLOSPO_01957 [Clostridium sporogenes ATCC
           15579]
          Length = 593

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 57/168 (33%), Gaps = 8/168 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +   + R+     +R +  EN F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQKIFMVRHKTCKVVRNFLDENGFLEMETPILTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 KGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQPEFTQIDMELSFVEEDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +++    ++    +                    E     +   R+  
Sbjct: 253 VIELNERLLAKVFKEVAGIDIKLPIERMPYKIAMERYGSDKPDLRFGM 300



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 44/148 (29%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  I    +  +  I    L+   E                 E              
Sbjct: 417 LAKELDIINKDEFRFVWITEFPLLSYNEEEGRYQAEHHPFTALMDEDIELLDTDPGKVRA 476

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           K +++     EL      + D   Q   F      K+K     +      L       P 
Sbjct: 477 KAYDIVLNGEELGGGSIRIHDSKLQEKMFNVLGFTKEK----AWERFGFLLEAFKFGPPP 532

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A G DR++M + G  NI +VI  P
Sbjct: 533 HGGLAYGLDRMIMFLAGTENIKDVITFP 560


>gi|322386522|ref|ZP_08060149.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269441|gb|EFX52374.1| aspartate--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 584

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLSEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T    D   +      A +   ++ A D        ++  +
Sbjct: 296 LQDLTELVKDVDFKVFSEAPAVKAIVVKNAADKYSRKDIDKLTEQ 340



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 49/167 (29%), Gaps = 9/167 (5%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             TLD  +     L     ++ G+       +  +    + E  E              P
Sbjct: 390 ADTLDVANAALGALRVRLGKELGLIDPAKFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLP 449

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--N 300
             +S               +++     EL      +     Q   F      K   +   
Sbjct: 450 QRDSEQELEGDLSKVRAVAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAE 503

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        L  +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 504 EAQDQFGFLLEAMDYGFPPHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|320547658|ref|ZP_08041943.1| aspartate--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447733|gb|EFW88491.1| aspartate--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 582

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 69/223 (30%), Gaps = 27/223 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +       R  +  S+R Y    +FI++++  L   +P     ++            
Sbjct: 133 RRPKMLNNFKLRAKVTHSIRNYLDGLEFIDVETPMLTKSTPEGARDYLVPSRVNQGHFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT ++   +  S + 
Sbjct: 193 LPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDMETSFLSDKD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +       +              ++  +A   Y +    T  +   Q
Sbjct: 247 IQDITEGMIAKVMKDTKGIDVT---------LPFPRMSYDDAMNNYGSDKPDTRFEMLLQ 297

Query: 192 PDRHLLYL----------QAQQAGIRVAHDDTWSDIFSRILIE 224
               L+              +   ++   D        ++   
Sbjct: 298 DLTELVKDVDFKVFSQAPVVKAIVVKGNADKYSRKNIDKLTEF 340



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  ESA       
Sbjct: 402 ALRTRIAKELDMVDNSKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      K   +   E        L  
Sbjct: 462 AKVRAVAYDIVLNGYELGGGSLRINQRELQERMF------KALGFTAEEANDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 516 MNYGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFP 550


>gi|19552847|ref|NP_600849.1| aspartyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390518|ref|YP_225920.1| aspartyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|24212396|sp|Q8NQ19|SYD_CORGL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21324404|dbj|BAB99028.1| Aspartyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325855|emb|CAF21644.1| PROBABLE ASPARTYL-TRNA SYNTHETASE PROTEIN [Corynebacterium
           glutamicum ATCC 13032]
          Length = 608

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 66/188 (35%), Gaps = 22/188 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP     L  R+    + R     + F EI++ +L   +P      R F     ++   
Sbjct: 134 RRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEG---ARDFLVPARLR--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L  AG E+ +  A  +R+ +     QPEFT L+   +    + 
Sbjct: 188 PGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     II    ++   +I +              +T A+A  RY +       D    
Sbjct: 248 VIALGEEIISEVWKLIGYEIKT----------PIPRMTYADAMRRYGSDKPDLRFDIEIT 297

Query: 192 PDRHLLYL 199
                   
Sbjct: 298 ECTEFFQD 305



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 53/159 (33%), Gaps = 15/159 (9%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL-------GINCCTILDR-YPAPESALAN 250
             A++  +    D  ++ I    + E             G +  T +   + +P+    +
Sbjct: 406 EIAKKLDLIKEGDWAFTWIVDAPMFEPAADATASGDVALGNSKWTAVHHAFTSPKPEFLD 465

Query: 251 IYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
            +  +P       +++     E+      +     Q   FE           E       
Sbjct: 466 NFDTNPGDALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFEVMGIT----GEEAREKFGF 521

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 522 LLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 560


>gi|222153888|ref|YP_002563065.1| aspartyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254781755|sp|B9DW80|SYD_STRU0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222114701|emb|CAR43801.1| aspartyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 582

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 52/169 (30%), Gaps = 13/169 (7%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              LD  +     L    A++  +       +  +    + E  E              P
Sbjct: 390 ADELDIANATLGALRNRIAKELQLIDESAFNFLWVIDWPMFEWSEEEGRYMSAHHPFTLP 449

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKI 298
              SA              +++     EL      +     Q   F+     E + K++ 
Sbjct: 450 TEASAHELEGDLANVRAIAYDIVLNGYELGGGSLRINQRDLQERMFKALGFTEEEAKEQF 509

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                      L  +    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 510 G--------FLLEAMDYGFPPHGGLAIGLDRFVMLLAGKDNIREVIAFP 550



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 70/226 (30%), Gaps = 21/226 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R               R  +  S+R Y  +  FI++++  L   +P     ++ 
Sbjct: 122 ETRLRYRYLDLRRPEMLENFKLRAKVTHSIRNYLDDLNFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRISEGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       S      +           +   R+  +
Sbjct: 236 DLETSFLSEQEIQDIVEGMIAKVMKETKGIDVSLPFPRMSYDLAMNQYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
             D+   +   D           +   ++   D        ++   
Sbjct: 296 LQDVSELVKGIDFKVFSQAP-VVKAIVVKGNADRYSRKDIDKMTEF 340


>gi|197294531|ref|YP_001799072.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853858|emb|CAM11820.1| Aspartyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 561

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 84/305 (27%), Gaps = 42/305 (13%)

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEF--SCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
           + F+T L     +   LY    P+     K                 +  +         
Sbjct: 268 KPFAT-LTYNQAL--ELYGTDKPDLRNPLKIFDFTPFFTSDFGKDNLKGFKVSKTPFLTR 324

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVAN-QKIFSFQNVNCNPFSEPEYITVAEAFAR 176
             +E Y+        +K      +         K     +   N         V E   +
Sbjct: 325 RQVEKYQLFFENNFSLKLLTFEKKNDKITGGISKFIKDNSFLQNDEICFVVSGVKEKVHK 384

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           Y  I       +    + +                    +    I+   +      N   
Sbjct: 385 YLGIFRNKLAADLSLINENQ-------------------ESLLWIVDFPLLEFDASNNRF 425

Query: 237 ILDRYPAPESALANIYPADPRFTKR--FELYACNIELCNACDELLDPIEQRHRFE----- 289
               +P       +    DP+      ++L     E+      + +P  Q   F+     
Sbjct: 426 YSLHHPFTAPCNLDSLKKDPQKALALAYDLVWNGYEVGGGSFRINNPETQGIIFKLLGFS 485

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ++  +KK             +  L    P   G+A+G DRLVML T   NI +VI  P +
Sbjct: 486 QQEIQKKFG---------FLIEALQYGTPPHGGLALGLDRLVMLFTKTQNIKDVIAFPKT 536

Query: 349 QSNQE 353
           QS ++
Sbjct: 537 QSAKD 541



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 58/129 (44%), Gaps = 8/129 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            +   + FL++R+ I  S+R+  ++N F+E+++  L   +P     ++            
Sbjct: 132 RNPDVKHFLIQRHHITQSIRQTLLKNHFLELETPILSKSTPEGARDYLVPSRIYPGNFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   +  + AG EK F  A  +R+ +     QPEFT ++   +  +  +
Sbjct: 192 LPQ------SPQIYKQLYMIAGFEKYFQVARCFRDEDLRADRQPEFTQIDIETSFCTQAE 245

Query: 132 LMKDCMNII 140
           +M     II
Sbjct: 246 IMTLTEEII 254


>gi|295675469|ref|YP_003603993.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295435312|gb|ADG14482.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 599

 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y  E  FI+I++  L   +P     ++    T       
Sbjct: 133 RRPQMQHNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRTNP----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLSEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +         +                +   R   ++     D    
Sbjct: 247 IRDLFEAMIRHVFKTTIGVQLDEKFPVMEYAEAMRRFGSDKPDLRVK-LEFTELTDAMRD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANTKDGRVA 323



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  E +            P  E              K +
Sbjct: 424 KANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIYREEVQSKVF----RALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571


>gi|289578235|ref|YP_003476862.1| aspartyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527948|gb|ADD02300.1| aspartyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 592

 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I   +R++  +N FIEI++  L   +P     ++            
Sbjct: 141 RRPSMQKNLMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYLVPSRIYPGKFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K +  A   R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQPEFTQIDIEMSFVEVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +I    +              +     + ++  EA  R+   D        + 
Sbjct: 255 VLEINEKMIAQIFKETLG---------IDVPIPFKRLSYQEAMERF-GTDKPDLRFGMEL 304

Query: 192 PD 193
            D
Sbjct: 305 KD 306



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL     ++  +   +   +  I    L+E                 P  E         
Sbjct: 414 HLRLELGKRLNLIDENKYEFVWIVDFPLLEYDSEEKRYVAKHHPFTAPKDEDIDLLEKEP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K +++    +E+      + D   Q+  F      E++  E+     E +     
Sbjct: 474 LKVRAKAYDIVLNGVEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFK---- 529

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                   P   GIA G DRL M++TG++ I +VI  P +Q+
Sbjct: 530 -----YGAPPHGGIAYGLDRLAMIITGSDTIRDVIAFPKTQN 566


>gi|227875436|ref|ZP_03993577.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|306818747|ref|ZP_07452469.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307701054|ref|ZP_07638079.1| aspartate--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|227843990|gb|EEJ54158.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|304648433|gb|EFM45736.1| aspartate--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|307614049|gb|EFN93293.1| aspartate--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 595

 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 19/172 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RRR     L+ R  I S  R    +++F+EI++ +L   +P      R F     I   
Sbjct: 130 LRRRQLHDNLVLRAKISSVARRVMEKHEFLEIETPTLTRSTPEGA---RDFVVPARI--K 184

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   +    + 
Sbjct: 185 PGSWYALPQSPQLFKQLLMVGGMERYYQLARCYRDEDSRADRQPEFTQLDLEMSFVDQDD 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +M    ++++    V    + +              +   EA  +Y +    
Sbjct: 245 VMAVTEDLLKEVWAVIGYDLKT----------PIPRMPFKEAMDKYGSDKPD 286



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 11/113 (9%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
             + +P+    + +  DP       +++    +EL      +     Q   F      K 
Sbjct: 451 HAFTSPKPECMDTFDTDPGSALAYAYDIVCNGVELGGGSIRVHRRDVQERIF------KV 504

Query: 297 KIY--NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +   E        L       P   G+A+G+DR+  ++T + +I +VI  P
Sbjct: 505 MGFSPEEAQARFGFLLDAFKYGAPPHGGLALGWDRIAGMLTASPSIRDVIAFP 557


>gi|120437415|ref|YP_863101.1| aspartyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|117579565|emb|CAL68034.1| aspartyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 586

 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 70/198 (35%), Gaps = 23/198 (11%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R +     FIEI++  L   +P      R F     + +  
Sbjct: 137 RRNPVKNKLMFRHQVGMKVRNFLSNEGFIEIETPYLIKSTPEG---ARDFVVPSRMNE-- 191

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E +
Sbjct: 192 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVDQEDI 251

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    ++ R   +       +          E   +T  +A  +Y N             
Sbjct: 252 LNIFESLTRHLLKDIKGVDVA----------EFPRMTYDDAMKKYGNDKPDIRFGM---- 297

Query: 193 DRHLLYLQAQQAGIRVAH 210
           +   L   A+  G  V  
Sbjct: 298 EFAELDDIAKNKGFNVFD 315



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 47/149 (31%), Gaps = 13/149 (8%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G+R A +     +    L+E  E     +        P  E                +
Sbjct: 416 ELGLRKADEFAPLWVVDFPLLEWDEETERFHAMHHPFTSPKKEDFALLESEPGKVRANAY 475

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFLACL-TEMP 317
           +L     E+      + D   Q   F+       + K++            +       P
Sbjct: 476 DLVLNGNEIGGGSIRIHDKETQSQMFKYLGFTPEEAKEQFG--------FLMDAFQYGAP 527

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              GIA GFDRLV ++ G  +I + I  P
Sbjct: 528 PHGGIAFGFDRLVAILGGQESIRDFIAFP 556


>gi|1183838|dbj|BAA11815.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa]
          Length = 361

 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 12/120 (10%)

Query: 240 RYP-APESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            +P            A+P     + +++     EL      + D   Q+  F      + 
Sbjct: 220 HHPFTSPKCTPAELEANPGAALSRAYDMVLNGTELGGGSIRIHDKSMQQAVF------RV 273

Query: 297 KIYNETYPIDED--FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              +E    ++    L  L    P   G+A G DRLVML+TGA++I EVI  P +QS  +
Sbjct: 274 LGIDEAEQEEKFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGASSIREVIAFPKTQSAGD 333


>gi|261379281|ref|ZP_05983854.1| aspartate--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797715|gb|EFC53062.1| aspartate--tRNA ligase [Neisseria subflava NJ9703]
          Length = 602

 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPAMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFVDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEANRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|210623813|ref|ZP_03294062.1| hypothetical protein CLOHIR_02013 [Clostridium hiranonis DSM 13275]
 gi|210153308|gb|EEA84314.1| hypothetical protein CLOHIR_02013 [Clostridium hiranonis DSM 13275]
          Length = 604

 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 12/154 (7%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-----APESALANIYP 253
             A++ GI     + ++  F  +    +      N   +   +P       +    +   
Sbjct: 423 AVAEKLGILEEKKNQFN--FLWVTEFPLFEEDEENGRYVAKHHPFTSPLDEDIDRLDTDE 480

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
            D    K +++     E+      + D   Q+  F            E Y      L   
Sbjct: 481 KDTLRAKAYDIVLNGYEVGGGSVRISDSEVQKKMF----AALGLSEEEAYNKFGFLLDAF 536

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P  +G+A G DRLVML+ G +NI EVI  P
Sbjct: 537 KYGAPPHAGMAFGLDRLVMLLAGVDNIREVIAFP 570



 Score = 89.3 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 72/201 (35%), Gaps = 21/201 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R  + + +R Y  E  F EI++  L   +P     ++            
Sbjct: 145 RKPKMQRNLMLRQQVTNIVRRYLTEQNFCEIETPFLVKPTPEGARDYLVPSRVNEGKFYA 204

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 205 LPQ------SPQLLKQLLMVSGMDRYFQIVKCFRDEDLRADRQPEFTQIDTEMSFVEAED 258

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +++             + +N +       +T AEA  RY   D   T    + 
Sbjct: 259 VMTIMEKMVQE---------IFKETINVDIELPLPRMTYAEAMDRY-GSDKPDTRFGYEF 308

Query: 192 PDRHLLYLQAQQAGIRVAHDD 212
            +   L       G +V  D 
Sbjct: 309 VNITDLVEGC---GFKVFADC 326


>gi|315225114|ref|ZP_07866931.1| aspartate--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314944797|gb|EFS96829.1| aspartate--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 584

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 74/224 (33%), Gaps = 27/224 (12%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+ +   +R Y  E  FIE+++  L   +P      R F     +        Y
Sbjct: 138 RDNLIFRHKVSIMVRNYLSEQGFIEVETPVLIKSTPEG---ARDFVVPSRMNAG---EFY 191

Query: 78  -LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   + L+  G +K F     +R+ +     QPEFT ++   +    E +++  
Sbjct: 192 ALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDIIQTF 251

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGTTLDN 188
             + +   +      F               +T AEA   Y          +  G   D 
Sbjct: 252 EGLAKHLLKELKGLEFGT----------FPRMTYAEAMKTYGNDKPDIRFGMKFGELNDL 301

Query: 189 PDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLG 231
               D  +        GI V   +         ++     P +G
Sbjct: 302 AQHRDFKIFNEAELVVGIAVPGANSYTRKEIDALVEWVKRPQVG 345



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 46/154 (29%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R   +     +    L+E  E              P PE         
Sbjct: 404 ALRMELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDTDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  ++L     E+      + +   Q   F     +      E       FL    
Sbjct: 464 GAVRANAYDLVLNGNEVGGGSIRIFNQELQAKMF-----QLLGFTPEQAQAQFGFLMNAF 518

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A GFDRLV L+ G   I + I  P
Sbjct: 519 KYGAPPHGGLAFGFDRLVALLGGQETIRDFIAFP 552


>gi|212551115|ref|YP_002309432.1| aspartyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229470554|sp|B6YS49|SYD_AZOPC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|212549353|dbj|BAG84021.1| aspartyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 583

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 9/142 (6%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +  ++R Y   ++F+E+++  L   +P      R F     +   
Sbjct: 131 LRRTLIRSNLELRHQMVFAIRNYLNSHEFMEVETPVLINSTPEG---ARDFIVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +   L  SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 186 MGEFYSLPQSPQLFKQLLMIAGFDRYFQVVKCFRDEDLRTDRQPEFTQVDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFS 153
           ++     + +   +       S
Sbjct: 246 ILSIFEGLTKHLFKTIKGLDIS 267



 Score = 81.6 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 45/147 (30%), Gaps = 9/147 (6%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G+R         +    L E                 P  E         +      F
Sbjct: 411 RLGLRDKKQFGCLWVIDFPLFEYDNVLNRFFAKHHPFTSPKQEDVCLLETNPEFVRANAF 470

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQS 319
           ++    IE+      + +   Q+  F          ++E+Y   +   F+       P  
Sbjct: 471 DMVINGIEIGGGSIRIHNYELQKKIF------ALLGFSESYTQSQFGFFVDAFKYGAPPH 524

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            GIA+G DR V    G ++I + I  P
Sbjct: 525 GGIALGLDRFVATFAGLDSIRDCIAFP 551


>gi|225023970|ref|ZP_03713162.1| hypothetical protein EIKCOROL_00837 [Eikenella corrodens ATCC
           23834]
 gi|224942995|gb|EEG24204.1| hypothetical protein EIKCOROL_00837 [Eikenella corrodens ATCC
           23834]
          Length = 602

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      ++      D    
Sbjct: 245 IMDITEGMAKQVFKEALGVDLGDFPRMPYSEAMFYYGS--DKPDMRISLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRAAADMKGGRV 319



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 48/163 (29%), Gaps = 8/163 (4%)

Query: 195 HLLYLQAQQAGIR---VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
            L     ++ G        +     +    + E  E N            P P       
Sbjct: 413 ALRIKIGKEHGAENGYFVDEWKPLWVVDFPMFEYDEENDRWAAMHHPFTSPKPGHEDLME 472

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              +    + +++     E+      +     Q   F       K    E        L 
Sbjct: 473 SDPENCLARAYDMVLNGWEIGGGSIRIHRADIQEKVF----AALKITPEEQQNKFGFLLD 528

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            L    P   G+A G DRLV L+  A +I +VI  P +Q  Q+
Sbjct: 529 NLKFGAPPHGGLAFGLDRLVALMAQAESIRDVIAFPKTQRAQD 571


>gi|86132448|ref|ZP_01051042.1| Aspartyl-tRNA synthetase [Dokdonia donghaensis MED134]
 gi|85817009|gb|EAQ38193.1| Aspartyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 582

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 73/215 (33%), Gaps = 9/215 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+ +   +R+Y  E  FIE+++  L   +P      R F     + +   +   
Sbjct: 138 RESLIFRHRVALEVRKYLSEQDFIEVETPYLIKSTPEG---ARDFVVPSRMNE--GQFYA 192

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E ++    
Sbjct: 193 LPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDILNIFE 252

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            + R   +  N              +    +   +       +  G   +     D  + 
Sbjct: 253 GLTRHLLKEVNGVEIEKFPRMLYDDA--MRLYGNDKPDIRFGMKFGELNEVAQHKDFGVF 310

Query: 198 YLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLG 231
                  GI V   +        +I+     P +G
Sbjct: 311 NNAELVVGIAVPGGNSYTRKEIDKIIEWVKRPQVG 345



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 45/157 (28%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R   +     +    L+E  E     +        P P          
Sbjct: 404 ALRMELAERLGLRKPDEFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQIELLDTKP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q          E + K +            +
Sbjct: 464 GEVKANAYDLVLNGNEIGGGSIRIHDKETQAIMLRHLGFSEEEAKAQFG--------FLM 515

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   G+A G DRLV ++ G   I + I  P
Sbjct: 516 DAFEYGAPPHGGLAFGLDRLVAILGGQETIRDFIAFP 552


>gi|145295757|ref|YP_001138578.1| aspartyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|166225342|sp|A4QEL0|SYD_CORGB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|140845677|dbj|BAF54676.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 608

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 66/188 (35%), Gaps = 22/188 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP     L  R+    + R     + F EI++ +L   +P      R F     ++   
Sbjct: 134 RRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEG---ARDFLVPARLR--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L  AG E+ +  A  +R+ +     QPEFT L+   +    + 
Sbjct: 188 PGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     II    ++   +I +              +T A+A  RY +       D    
Sbjct: 248 VIALGEEIISEVWKLIGYEIKT----------PIPRMTYADAMRRYGSDKPDLRFDIEIT 297

Query: 192 PDRHLLYL 199
                   
Sbjct: 298 ECTEFFQD 305



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 53/159 (33%), Gaps = 15/159 (9%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL-------GINCCTILDR-YPAPESALAN 250
             A++  +    D  ++ I    + E             G +  T +   + +P+    +
Sbjct: 406 EIAKKLDLIKEGDWAFTWIVDAPMFEPAADATASGDVALGNSKWTAVHHAFTSPKPEFLD 465

Query: 251 IYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
            +  +P       +++     E+      +     Q   FE           E       
Sbjct: 466 NFDTNPGDALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFEVMGIT----GEEAREKFGF 521

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 522 LLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 560


>gi|289669606|ref|ZP_06490681.1| aspartyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 588

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 77/229 (33%), Gaps = 30/229 (13%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   +   +      RRP +      R  +  +LR +     F +I++  L 
Sbjct: 110 PLPFHAHENPGEETRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDARDFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A      +      +IR   +           V+ +  ++   +
Sbjct: 224 LRADRQLEFTQLDMEFAFVRERDVQDFVEVMIRAIFKEV---------VDVDLAAQFPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           T AEA  R+   D        +  D   L   ++      A +D    +
Sbjct: 275 TWAEAMRRF-GSDKPDLRIALELVDVAELVKSSEFPVFTAAANDVDGRV 322



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L+A +    +A       +    + E  +              PA +        A 
Sbjct: 408 ALRLKAGKEFNLLADGWAPLWVTDFPMFEWDDEAQRYVALHHPFTAPAVDDIADLRANAR 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-T 314
              ++ +++     E+      +  P  Q   FE           E        L  L  
Sbjct: 468 IAVSRGYDMVLNGNEIGGGSIRIHRPDMQSAVFE----LLGIGAEEARAKFGFLLDALNY 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 524 GAPPHGGIAFGIDRIAALMAGTESIRDVIPFP 555


>gi|284044470|ref|YP_003394810.1| aspartyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948691|gb|ADB51435.1| aspartyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 596

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 66/195 (33%), Gaps = 18/195 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFST 64
           +           +  L  R+ +  ++R    E  F+EI++  L   +P     ++     
Sbjct: 134 RHRTLDLRRAPLQEALKLRHQVVHTMRNVLTERDFMEIETPILTRSTPEGARDYLVPARI 193

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
           E      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 194 EPGAFYALPQ------SPQLFKQLLMIGGYERYYQIARCFRDEDTRADRQPEFTQLDLEL 247

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    + +++   +++                           ++  EA  R+   D   
Sbjct: 248 SFVDEDDVIETMESVMGAIFSAT---------DFPVAPPAWPRMSYDEALLRF-GSDRPD 297

Query: 185 TLDNPDQPDRHLLYL 199
           T    +  +   L+ 
Sbjct: 298 TRFGLEISELGSLFA 312



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 45/143 (31%), Gaps = 19/143 (13%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
            +   DI   +     EP    N       +P                 + ++L     E
Sbjct: 427 PEDRHDILWIVDFPMFEPT--DNGGWTAVHHPFTAPVGDLDGDPGALRGRGYDLVLDGSE 484

Query: 271 LCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIA 323
           +         P  Q+  FE      ++ Q +              L       P   GIA
Sbjct: 485 IGGGSIRTNTPEVQQKVFEILGLSAEDAQARFG----------FLLDAFRYGAPPHGGIA 534

Query: 324 MGFDRLVMLVTGANNINEVIWTP 346
           MG DR+V L+ G ++I +VI  P
Sbjct: 535 MGVDRIVTLLAGRDSIRDVIAFP 557


>gi|121608304|ref|YP_996111.1| aspartyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|166225441|sp|A1WHI6|SYD_VEREI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|121552944|gb|ABM57093.1| aspartyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 604

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 59/172 (34%), Gaps = 18/172 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +   +R +   N FI+I++  L   +P     ++            
Sbjct: 133 RRPYMQRNLMLRYKVAMQVRNFLDANGFIDIETPMLTKSTPEGARDYLVPSRVHD----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    + 
Sbjct: 188 -GQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFMQEQD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +     ++I                       E   +T  +A +RY +    
Sbjct: 247 IRDLFQDMIETVFRNTLGVDLG----------EFPVMTYQDATSRYGSDKPD 288



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 54/183 (29%), Gaps = 8/183 (4%)

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLL--YLQAQQAGIRVAHDDTWSDIFSRILIE 224
                +    +   D    +++     R  +      ++ G+          +    + E
Sbjct: 390 RTGAQDGDLIFFGADKEKIVNDAIGALRTKIGHSEFGKKNGL-FEERWAALWVVDFPMFE 448

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E     +        P            +   +K +++     E+      +     Q
Sbjct: 449 FDEQAQRYSAMHHPFTAPKDGHEDWMASAPEKCISKGYDMVLNGWEMGGGSVRIHRADVQ 508

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           +  F+           E        L  L    P   G+A G DR+V L+TGA +I +VI
Sbjct: 509 QKVFDALQIT----PEEARLKFGFLLDALQYGAPPHGGMAFGLDRIVTLMTGAESIRDVI 564

Query: 344 WTP 346
             P
Sbjct: 565 AFP 567


>gi|325107096|ref|YP_004268164.1| aspartyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324967364|gb|ADY58142.1| aspartyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 588

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 67/206 (32%), Gaps = 23/206 (11%)

Query: 4   IPSQPWWNRDF-----HYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET 57
           +P++    ++          +  ++ R+     +R+YF    F++I++  L   +P    
Sbjct: 119 LPNEELRLKNRVVDLRRPELQNAMVLRHKFTKLVRDYFDAQGFLDIETPILGRSTPEGAR 178

Query: 58  -HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
            ++            + +      SP+   + L+ +G ++    A  +R+ +     QPE
Sbjct: 179 DYLVPSRIHEGCFYALPQ------SPQIFKQLLMCSGYDRYMQIARCFRDEDLRADRQPE 232

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT ++   A    + ++     ++                            + A+   R
Sbjct: 233 FTQIDLEMAFVEQDDVLGVIDGMVDKILTDLAG---------IQHQMPLPRYSYADVMER 283

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQ 202
           +   D        +  D   +  +  
Sbjct: 284 F-GTDKPDMRFGMELVDLAEIAGRCD 308



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 50/153 (32%), Gaps = 5/153 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +      +   +    L+   E             YP P+              + 
Sbjct: 415 EELELYDPKAFSCLWVVDFPLMHFDEDEKRWYAEHHPFCYPHPDDLEKLDSDPAAVRAQS 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           ++L     E  +    + D   Q+  F+      +    E        L  L    P   
Sbjct: 475 YDLVVNGYEAASGSIRIHDSAIQQKVFD----LLEINPEEAERRFGFLLQGLRFGAPPHG 530

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G A+G DR VML+ G +NI +VI  P +Q   +
Sbjct: 531 GAALGLDRWVMLLCGYDNIRDVIAFPKTQKASD 563


>gi|298369891|ref|ZP_06981207.1| aspartate--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281351|gb|EFI22840.1| aspartate--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 602

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A                +   +  AEA   Y   D      +   
Sbjct: 245 IMDITEGMAKQVFQDALGVDLG----------DFPRMPYAEAMF-YYGSDKPDMRISLKF 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L    +    R A D     + 
Sbjct: 294 TELTDLMKTEEFKVFRGAADMKGGRVV 320



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+          +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKAKVVNEAIGALRIKVGLEHGAENSYFVDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P P          +    + +++     E+      +     Q 
Sbjct: 447 DEDGDRWAAMHHPFTSPKPGHEDLMASDPENCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|86140819|ref|ZP_01059378.1| aspartyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85832761|gb|EAQ51210.1| aspartyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 582

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 77/228 (33%), Gaps = 28/228 (12%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +  ++R Y  E  FIE+++  L   +P      R F     + +  
Sbjct: 133 RRNPVKEKLIFRHKVSIAVRNYLSEQGFIEVETPYLIKSTPEG---ARDFVVPSRMNE-- 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDI 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGT 184
           +     + +   +                      +T  EA A+Y          ++ G 
Sbjct: 248 LNIFEGLTKHLLKEVVGFEIES----------FPRMTYDEAMAKYGNDKPDIRFGMEFGE 297

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLG 231
                   D  +        GI V            +++     P +G
Sbjct: 298 LNAVAQHKDFKVFNSAELVVGIAVPGGASYTRKEIDKLIDWVKRPQVG 345



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 50/160 (31%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A Q G+R + +     +    L+E  E     +        P P          
Sbjct: 404 ALRMELATQLGLRKSDEFAPLWVVDFPLLEWDEETERYHAMHHPFTSPKPGQMELLDTKP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  ++L     E+      + D   Q   F+     K+    E        +    
Sbjct: 464 GEVKANAYDLVLNGNEIGGGSIRIHDKEIQSKMFDYLGFTKE----EAQAQFGFLMDAFQ 519

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A G DRLV ++ G   I + I  P + + ++
Sbjct: 520 YGAPPHGGLAFGLDRLVAILGGQETIRDFIAFPKNNAGRD 559


>gi|290559874|gb|EFD93197.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 457

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 69/187 (36%), Gaps = 15/187 (8%)

Query: 16  YRRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RR+  +     R+ +    R +F +N F+E+++ +L      ET  R F          
Sbjct: 130 LRRKEMIDNIEFRDKVTKRARRFFWDNDFLELETPTLVKDT-YETGARPFIVPSRT--KK 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   +  + +G  K F  A A+R+ +Q    QPEFT L++  + +    +
Sbjct: 187 GMFFSLPQSPQIYKQLAMMSGLGKYFQVARAFRDEDQREDRQPEFTQLDFEVSFKDESYI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M    ++I+        +               + +   EA ++Y +       D P   
Sbjct: 247 MSLVEDLIKSIFNDVIGEKLK---------VPFKKMDYYEAMSKYGSDKPDIRYDYPIID 297

Query: 193 DRHLLYL 199
               +  
Sbjct: 298 ITDEIKD 304


>gi|195952407|ref|YP_002120697.1| tRNA synthetase class II (D K and N) [Hydrogenobaculum sp. Y04AAS1]
 gi|195932019|gb|ACG56719.1| tRNA synthetase class II (D K and N) [Hydrogenobaculum sp. Y04AAS1]
          Length = 300

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 66/301 (21%), Positives = 113/301 (37%), Gaps = 31/301 (10%)

Query: 29  QSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKK 88
              +R ++ +  + E+ +  +Q  P  E +I+    ++      ++  YL TSPE S K 
Sbjct: 19  IDKIRGFYKKIGYTEVFTPYIQDEPNLEKYIKPVEIDITYCGK-KEKAYLHTSPERSMKA 77

Query: 89  LLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           LL   +  IF  A  +R+ E G L+  EFTMLE Y          KD +N I        
Sbjct: 78  LLKTYKSNIFQIAKVFRDEECGSLNSIEFTMLECYNV------ENKDAINEISKLIFELF 131

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
            +            ++P+     +AF  Y  +            D  +L       G   
Sbjct: 132 GENIK------CILTKPKLTPFEKAFEEYLGVIFSE--------DEDILKNNLISFGYDF 177

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
              DTW ++  ++++   +P LG +    L  +P     L+         +KRFEL+   
Sbjct: 178 DDSDTWEELIDKMMVHM-QPKLGKSQIEFLTDFPCKLGVLSTCKD---GVSKRFELFIDG 233

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDR 328
           +E+ N   E  +  + +   E     K     E    D       +      G ++G +R
Sbjct: 234 VEIANGWIEETNHEKIKDIVENASNYKPIKDKEKLVKDYH--NDFSYT----GYSIGIER 287

Query: 329 L 329
           L
Sbjct: 288 L 288


>gi|293398532|ref|ZP_06642710.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291611003|gb|EFF40100.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 602

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 66/197 (33%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  + + +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTAAQNGDIIFFGADKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQG 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|145350037|ref|XP_001419430.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579661|gb|ABO97723.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 623

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 48/156 (30%), Gaps = 9/156 (5%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A+   +   +      I    + E  E              P  + A AN         
Sbjct: 444 IAKTYDMIPENAHAVLWITEFPMFEFNEDENRYEAMHHPFTAPNQDDAAANPDDLTGARA 503

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACL-TEM 316
             ++L    +E+      +     Q   F      +       E        +       
Sbjct: 504 IAYDLVYNGVEIGGGSLRIYRRDVQEKVF------RAIGLSDEEAENKFGYLMEAFQYGA 557

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           P   G+A G DRLVM++ GA +I +VI  P + + Q
Sbjct: 558 PPHGGLAFGLDRLVMMLAGAKSIRDVIAFPKTAAGQ 593



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 13/195 (6%)

Query: 18  RRP----FLLKRNMIQSSLREYFVEN-QFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
           RRP     L  R+    +LR+   ++  F+E+++  L   +P     ++     +     
Sbjct: 158 RRPQMARNLKLRHDTLRALRKVMEDDYGFLEVETPMLTRSTPEGARDYLVPSRLQPGGAY 217

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   A     
Sbjct: 218 ALPQ------SPQLFKQMLMVAGVDRYYQVARCFRDEDLRADRQPEFTQLDIEMAFTDDA 271

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +MK   +++R A +                    E     +   RY             
Sbjct: 272 GIMKLAEDLMRAAFKSGVDVDLPASFPQMTYAHAMEKYGSDKPDLRYGLEMTTLDDALAG 331

Query: 191 QPDRHLLYLQAQQAG 205
              +      A+  G
Sbjct: 332 CEFKIFADALAESNG 346


>gi|84496698|ref|ZP_00995552.1| aspartyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383466|gb|EAP99347.1| aspartyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 620

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 67/182 (36%), Gaps = 24/182 (13%)

Query: 11  NRDFHYRRR--------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
            +  +   R          L  R+ + ++ R       F+EI++ +L   +P      R 
Sbjct: 126 LKHRYLDLRRPGKSSAGTALRLRSKVNAAARRVLEGRDFVEIETPTLTRSTPEG---ARD 182

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+
Sbjct: 183 FLVPARL--APGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLD 240

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + +++   +++             ++ ++         +T AEA  R+ +  
Sbjct: 241 IEMSFVEQDDVIELMEDVLAEM----------WKLIDVEIPRPIPRMTYAEAMRRFGSDK 290

Query: 182 LG 183
             
Sbjct: 291 PD 292



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 7/97 (7%)

Query: 253 PADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
             DP       +++     EL      +     Q   F    +       E+       L
Sbjct: 471 DTDPGSALAYAYDIVCNGNELGGGSIRIHRRDVQERVF----KVMGLTDEESQEKFGFLL 526

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   GIA+G DR+  L+ G ++I +VI  P
Sbjct: 527 DAFAFGAPPHGGIAVGMDRICALLAGTDSIRDVIAFP 563


>gi|226941365|ref|YP_002796439.1| aspartyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254781737|sp|C1DB91|SYD_LARHH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226716292|gb|ACO75430.1| Syd [Laribacter hongkongensis HLHK9]
          Length = 603

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 64/184 (34%), Gaps = 20/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPAMQKNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + + 
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQIVKCFRDEDLRADRQPEFTQIDLETSFLNEDD 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M     + R     A                +   +T A+A   Y +   DL  +L   
Sbjct: 245 IMDITEGMARQVFHDAMDVELG----------DFPRMTYADAMHYYGSDKPDLRVSLKFA 294

Query: 190 DQPD 193
           +  D
Sbjct: 295 ELTD 298



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 53/182 (29%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  +  +  +AG     +     +    + E 
Sbjct: 387 ERTGAENGDIIFFGADKAKVVNEAIGALRIRIGHEHGEAGGYFVREWRPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E +     C      P P               + +++     E+      +     Q 
Sbjct: 447 DEDDDRWTACHHPFTSPKPGHEDLMATDPGACIARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+ GA++I +VI 
Sbjct: 507 KVF----GALKISPEEQQNKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMAGADSIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|261378388|ref|ZP_05982961.1| aspartate--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145159|gb|EEZ71577.1| aspartate--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 602

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPTMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKTKVVNEAIGALRIKVGLEYGKDNGYFVDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|195579672|ref|XP_002079685.1| GD24088 [Drosophila simulans]
 gi|194191694|gb|EDX05270.1| GD24088 [Drosophila simulans]
          Length = 887

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 74/201 (36%), Gaps = 20/201 (9%)

Query: 13  DFHY-RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQ 69
           D  +   +  L  R+ +   +REY +    F+E+++ +L + +PG       F       
Sbjct: 590 DLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQE---FVVPTRKA 646

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
            H      L  SP+   + L++ G ++ F  A  +R+       QPEFT L+   +  S 
Sbjct: 647 GHF---YSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSR 703

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + +M+     +R           S+        +    IT  EA  +Y   D   T    
Sbjct: 704 DDIMQLIEETLRY----------SWPKDFPRLQTPFRRITYEEAMEKY-GNDKPDTRFGF 752

Query: 190 DQPDRHLLYLQAQQAGIRVAH 210
              +   +  ++ +   +   
Sbjct: 753 LLNNVSEIIEKSDEFKEKYDD 773


>gi|162456552|ref|YP_001618919.1| aspartyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|161167134|emb|CAN98439.1| aspS [Sorangium cellulosum 'So ce 56']
          Length = 649

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 55/161 (34%), Gaps = 17/161 (10%)

Query: 195 HLLYLQAQQAGI--RVAHDDTWSDIF--SRILIEKIEPNLGINCCTILDRYPAPESALAN 250
            L    A++ G+     H D W  ++  +  L E  E              P  E     
Sbjct: 450 KLRIDVAKKMGLIPEYGHGDQWRFLWVTNPPLFEFDEETGRWAAAHHAFTRPIDEHVALL 509

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPID 306
                     R++L     E+      L DP  Q   F+     E   + K         
Sbjct: 510 ESDPARVECYRYDLVLNGFEIGGGSIRLHDPEVQARVFKTLGIDENDARDKFG------- 562

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              L  L +  P   GIA+G DRL ML++GA  + +VI  P
Sbjct: 563 -FLLDALRSGAPPHGGIALGMDRLAMLLSGAPTLRDVIPFP 602



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
                +  L  R+ I  + R Y  +   +E+++  L   +PG   +   F     I    
Sbjct: 155 RRAPLQRALRMRHEINRATRNYLSDKGCLELETPFLVKYTPGGARN---FLVPSRIS--A 209

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   +  + AG ++ F     +R+ +     QPEFT ++   +  + + +
Sbjct: 210 GKFYALAESPQLYKQLFMVAGFDRYFQIVKCFRDEDLRIDRQPEFTQIDVELSFVNQDDV 269

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 ++    + A  K  +       P      +  AE+  R+   D        +  
Sbjct: 270 FGLMEGLVFAVFKAALGKDLT----ELYPTGRFPRMPYAESMRRF-GNDKPDLRFGIEHT 324

Query: 193 DRHLLYLQAQQAGIRVA 209
           D   L ++    G+   
Sbjct: 325 DLTDLIVEHNGGGVPFW 341


>gi|299531498|ref|ZP_07044904.1| aspartyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298720461|gb|EFI61412.1| aspartyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 599

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 16/195 (8%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHL--LYLQAQQAGIRVAHDDTWSDIFSRILI 223
           +     +    +   D    +++     R         +++G+          +    + 
Sbjct: 383 KRTGAQDGDLIFFGADKEKIVNDSIGALRLKVGHSEFGKKSGL-FEDKWAPLWVVDFPMF 441

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E +            P                 K +++     EL      +     
Sbjct: 442 EHDEESGRWVAVHHPFTSPKDGHEDLMDTDPGKCIAKAYDMVLNGWELGGGSVRIHRADV 501

Query: 284 QRHRFEKEM----QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           Q   FE       Q++ K            L  L    P   G+A G DRL+ L+TG+++
Sbjct: 502 QAKVFEALNITPEQQRAKFG--------YLLDALQYGAPPHGGLAFGLDRLITLMTGSDS 553

Query: 339 INEVIWTPFSQSNQE 353
           I +VI  P +Q  Q+
Sbjct: 554 IRDVIAFPKTQRAQD 568



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 72/185 (38%), Gaps = 26/185 (14%)

Query: 18  RRPFLLKRNMIQSS-----LREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQD 70
           RRP + +RNM+        +R +  +  FI+I++  L + +P     ++           
Sbjct: 131 RRPVM-QRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVPSRVHDGEFF 189

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E
Sbjct: 190 ALPQ------SPQLYKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEE 243

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
           ++      +I+             Q        E   +T  +A  R+ +   DL   L+ 
Sbjct: 244 EIRAIFQRMIKEVF----------QTQLNVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEF 293

Query: 189 PDQPD 193
            +  D
Sbjct: 294 TELTD 298


>gi|225869429|ref|YP_002745377.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259511870|sp|C0MGD3|SYD_STRS7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225702705|emb|CAX00825.1| aspartyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 582

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 66/225 (29%), Gaps = 19/225 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R               R      +R Y     FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLESFKLRAKTTHVIRNYLDNLGFIDVETPMLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRISQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +                     +    +   R+   
Sbjct: 236 DLETSFLSEQEIQDIVEGMIAKVMKDTKGIEVKLPFPRMAYDDAMNHYGSDKPDTRFDMF 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T    +   +     QA +   ++   D        ++   
Sbjct: 296 LQDLTDLVKEIDFKVFSEAQAVKAIVVKGHADRYSRKDIDKLTEF 340



 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  ESA       
Sbjct: 402 ALRTRIAKELDMIDMSQFNFLWVVDWPMFEWSEEEERYMSAHHPFTLPTAESAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     EL      +     Q   F      +   +   E        L  
Sbjct: 462 AKVRAVAYDIVLNGYELGGGSLRINQKDMQERMF------RALGFTAEEANEQFGFLLEA 515

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DRLVML+ G +NI EVI  P
Sbjct: 516 MEYGFPPHGGLAIGLDRLVMLLAGKDNIREVIAFP 550


>gi|322376004|ref|ZP_08050514.1| aspartate--tRNA ligase [Streptococcus sp. C300]
 gi|321278954|gb|EFX55997.1| aspartate--tRNA ligase [Streptococcus sp. C300]
          Length = 587

 Score = 99.3 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQDETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLSEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMSLYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|319940130|ref|ZP_08014484.1| aspartyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810844|gb|EFW07171.1| aspartyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 584

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    + E  E              P  ++A       
Sbjct: 402 ALRIRFAKELGLIDESKFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQADTAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                  +++     EL      +     Q   F      K   ++E    D+    L  
Sbjct: 462 SKVRAIAYDIVLNGYELGGGSLRINHKDLQERMF------KALGFSEEEATDQFGFLLEA 515

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 516 MDYGFPPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLANLKLRAKVTHSIRNYLDELEFIDVETPFLTKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEML 295

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T        +      A +   ++ A D        ++  +
Sbjct: 296 LQDLTELVKGIDFKVFSEAPAVKAIVVKNAADSYSRKDIDKLTEQ 340


>gi|315221547|ref|ZP_07863467.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315189381|gb|EFU23076.1| aspartyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 580

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+       +  +    + E  E              P  ++A       
Sbjct: 398 ALRIRLAKELGLIDESKFNYLWVVDWPMFEWSEEEGRYMSAHHPFTLPQADTAHELEGDL 457

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLAC 312
                  +++     EL      +     Q   F      K   ++E    D+    L  
Sbjct: 458 SRVRAIAYDIVLNGYELGGGSLRINHKDLQERMF------KALGFSEEEATDQFGFLLEA 511

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 512 MDYGFPPHGGLAIGLDRFVMLLAGEENIREVIAFP 546



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 118 DTRLRYRYLDLRRPEMLANLKLRAKVTHSIRNYLDELEFIDVETPFLTKSTPEGARDYLV 177

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 178 PSRVNQGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 231

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +                  +   R+  +
Sbjct: 232 DLETSFLSDQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEML 291

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILIE 224
               T        +      A +   ++ A D        ++  +
Sbjct: 292 LQDLTDLVKGIDFKVFSEAPAVKAIVVKNAADSYSRKDIDKLTEQ 336


>gi|258515494|ref|YP_003191716.1| aspartyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779199|gb|ACV63093.1| aspartyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 608

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 50/150 (33%), Gaps = 13/150 (8%)

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA--CNIE 270
             +++ + I           +   +    P  +   A  +P      +   L        
Sbjct: 431 HLAEMLNIIPENLNNFLWVTDFPLLAYD-PEEKRYAAMHHPFTAPRDEDIALMETEPGKV 489

Query: 271 LCNACD------ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSS 320
              A D      E+     + HR + + +    I        E F   L       P   
Sbjct: 490 RAKAYDLVLNGVEVGGGSIRIHRRDVQEKMFAAIGLSAEVAREKFGYMLEAFEFGTPPHG 549

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           G A GFDRL+M++ G  +I +VI  P +QS
Sbjct: 550 GFAFGFDRLIMILAGKKSIRDVIAFPKTQS 579



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 69/203 (33%), Gaps = 28/203 (13%)

Query: 11  NRDFHYRRRPFLLKRNMIQSSL----------REYFVENQFIEIDSMSLQ-YSPGNET-H 58
           + +   R R   L+R  +Q S+          R++  EN F EI++  L   +P     +
Sbjct: 141 DENLRLRYRYLDLRRPEMQRSIYLRHKTSKVARDFLDENGFWEIETPMLTKSTPEGARDY 200

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ AG E+ F     +R+ +     QPEFT
Sbjct: 201 LVPSRINPGKFYALPQ------SPQIFKQILMVAGMERYFQIVRCFRDEDLRADRQPEFT 254

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +    E ++     ++                      S    +T  EA  R+ 
Sbjct: 255 QIDLEMSFVDVEDVLLLMEKLVSRLYLETAGLDLI---------SPFPRLTYQEAIDRF- 304

Query: 179 NIDLGTTLDNPDQPDRHLLYLQA 201
             D   T    +  D   + L  
Sbjct: 305 GSDKPDTRFGLELCDLSDIALGC 327


>gi|160903057|ref|YP_001568638.1| aspartyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160360701|gb|ABX32315.1| aspartyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 599

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 68/201 (33%), Gaps = 17/201 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R +  L+ R+ +    R+      F+EI++  L   +P      R F     ++   
Sbjct: 136 RKERMQRNLILRHKVMKITRDTLSAEGFLEIETPYLTKSTPEG---ARDFLVPSRLK--- 189

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G +K F  A  +R+ +     QPEFT ++  ++      
Sbjct: 190 PGNFYALPQSPQLFKQLLMVSGFDKYFQIARCFRDEDFRADRQPEFTQIDIEQSFV---- 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                   I    E   ++IF             +  T  E   +Y   D        + 
Sbjct: 246 ----EKEDIFALTEKLIKEIFEKSLNYNGLEIPFQKYTYDEVIQKY-GSDKPDIRYGMEF 300

Query: 192 PDRHLLYLQAQQAGIRVAHDD 212
            D    +   +   I+   D 
Sbjct: 301 IDLTAYFQNTEANFIKNGIDK 321



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 6/158 (3%)

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
           + +  ++   +      W   F  +     E    +            + A         
Sbjct: 412 IKMIKEEFEKKSGFSIIWVTDF-PMFSWNEEEQRIVAEHHPFTMPNLDDLAKYENKDPLK 470

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
             ++ ++L     E+ +    +     Q   F+     K+    E        L      
Sbjct: 471 IKSQSYDLVINGYEIASGSIRIHKQDVQEKVFDILGLSKE----EAQEKFGFLLEAFKYG 526

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   GIA+G DRLV ++ G  +I EVI  P + S  +
Sbjct: 527 APPHGGIAIGMDRLVSILVGEESIKEVIAFPKTASGTD 564


>gi|289620070|emb|CBI53514.1| unnamed protein product [Sordaria macrospora]
          Length = 580

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/349 (12%), Positives = 110/349 (31%), Gaps = 38/349 (10%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
            + ++    R  +      +  R  ++ +  + + E +F ++   ++      G  T   
Sbjct: 259 MLDNRHLVLRGENAS--ALMKLREFVELAFVDTYRELEFRKVSPPAMVQTQVEGGST--- 313

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   D+  +  YL  S +    + + A   +++C   ++R  +     H  E+T 
Sbjct: 314 -----LFKYDYYGEEAYLTQSSQLYL-ETVLASMGQVYCIEKSFRAEKSLTRRHLSEYTH 367

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E       +  L+     II    +       +   +              +   ++  
Sbjct: 368 VEAEIDFIEFSDLLDHLEEIISKVVDRVLNDETAAGYLKVLN-------PEFKKPEKFLR 420

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +     ++  ++ D  +L  +         +   + D  +     ++     IN   +L 
Sbjct: 421 MKYEEAIEWLNKQDPPILNEE--------GNPHVFGDDIAEAAERRM--TDIINRPILLT 470

Query: 240 RYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
            +P    +      P D R T+  ++    +         +D  ++      E  +K  I
Sbjct: 471 HFPVEIKAFYMKKDPNDLRVTESVDVLMPGVGEIVGGSMRMDDYDEL----IEAYKKNGI 526

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +E Y    D            G  +G +R +  +   +++      P 
Sbjct: 527 GHEPYFWYTD--QRKYGTSPHGGYGLGLERFLAWMANQHSVRTTCLYPR 573


>gi|225021326|ref|ZP_03710518.1| hypothetical protein CORMATOL_01345 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945708|gb|EEG26917.1| hypothetical protein CORMATOL_01345 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 593

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 64/196 (32%), Gaps = 26/196 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L  R+    + R    ++ F+EI++ +L   +P      R 
Sbjct: 123 ETRLKYRYLDLRRPAQGGALRLRSEANKAARRVLEKHDFVEIETPTLTRSTPEGA---RD 179

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEF  L+
Sbjct: 180 FVVPARL--KPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQPEFMQLD 237

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    E ++     I+    ++    I +              +T AEA   Y +  
Sbjct: 238 MEMSFVDQEDIIAIVEEILVALWQLIGYTIPT----------PIPRMTYAEAMRDYGSDK 287

Query: 182 LGTTLDNPDQPDRHLL 197
                D          
Sbjct: 288 PDLRFDIKLVECTEFF 303



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 56/159 (35%), Gaps = 15/159 (9%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNL------GINCCTILDR-YPAPESALAN 250
             A++ G+    D  ++ +    +     E         G +  T +   + AP     +
Sbjct: 406 EIARKLGLIKEGDWAFTWVVDAPMFEPSAEAKASGDVALGHSAWTAVHHAFTAPTDECLD 465

Query: 251 IYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
            +  DP       +++     E+      +     Q   F+     K+    E       
Sbjct: 466 TFDTDPGSALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITKE----EAQEKFGF 521

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L       P   G+A+G+DR+V L+ G ++I +VI  P
Sbjct: 522 LLDAFAFGAPPHGGVALGWDRIVSLLGGFDSIRDVIAFP 560


>gi|270291328|ref|ZP_06197550.1| aspartyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304385080|ref|ZP_07367426.1| aspartate--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|270280174|gb|EFA26010.1| aspartyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|304329274|gb|EFL96494.1| aspartate--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 593

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 67/189 (35%), Gaps = 21/189 (11%)

Query: 16  YRRRPFLL---KRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR   L     RN I  ++  Y  E  F++I++  L   +P     ++           
Sbjct: 133 LRRPEMLKGLKIRNRITQAVHSYLDEQGFLDIETPDLTKSTPEGARDYLVPSRVYPGHFY 192

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  + E
Sbjct: 193 ALPQ------SPQLFKQLLMGAGIDRYYQLARCFRDEDLRGDRQPEFTQIDLETSFLTAE 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++      +I                ++ +     + I+  E+  R+   D        +
Sbjct: 247 EIQDITEGLIA---------RVMKDTLDIDVKLPFDRISWQESMDRF-GTDQPDVRFGME 296

Query: 191 QPDRHLLYL 199
             D   +  
Sbjct: 297 LKDISEIVA 305



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 63/223 (28%), Gaps = 18/223 (8%)

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           + +    E    K  ++  +    FS P      EA  +         + +         
Sbjct: 340 DKLAKYVERFGAKGLAWLKITDQGFSGPVAKFFDEATEKQIMAKTDAKVGDLLLFAADRK 399

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIE-------PNLGINCCTILDRYPAPESALAN 250
            + A   G          D+        +             +   +   +P       +
Sbjct: 400 KVVADTLGYLRVELAKRFDLIDEDQFAFLWVVDWPLFEYDEGDERWVAAHHPFTMPNEED 459

Query: 251 IYPADPR------FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           ++  D          + +++    +EL      +     Q    +      +K  ++   
Sbjct: 460 LHYLDEGEDPHKAHAQSYDIILNGLELGGGSIRINTREVQEKMLKALGFTLEKANDQFGY 519

Query: 305 IDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    L  L    P   G+A+G DR   L+   +NI +VI  P
Sbjct: 520 L----LTALDYGFPPHGGLAIGLDRFARLLAKRDNIRDVIAFP 558


>gi|240113392|ref|ZP_04727882.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240118546|ref|ZP_04732608.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|254494275|ref|ZP_05107446.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268599465|ref|ZP_06133632.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268604256|ref|ZP_06138423.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|226513315|gb|EEH62660.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268583596|gb|EEZ48272.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268588387|gb|EEZ53063.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 602

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 66/197 (33%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  + + +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTAAQNGDIIFFGADKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|226356065|ref|YP_002785805.1| aspartyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|259511855|sp|C1CV34|SYD_DEIDV RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226318055|gb|ACO46051.1| putative aspartate--tRNA ligase (aspartyl-tRNA synthetase)
           [Deinococcus deserti VCD115]
          Length = 577

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 49/134 (36%), Gaps = 28/134 (20%)

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPR----------FTKRFELYACNIELCNACDE 277
                +       +P         +P D              + ++L     E+      
Sbjct: 425 EFDEDSGTWTYMHHP-----FTAPHPDDAELFGTLRQGEIRAQAYDLVLNGFEVGGGSVR 479

Query: 278 LLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
           + DP  Q   FE     E Q ++K           F+  L    P   GIA GFDRLVM+
Sbjct: 480 IHDPAVQTKMFEAIGFTEAQAREKFG--------FFMDALEYGTPPHGGIAWGFDRLVMV 531

Query: 333 VTGANNINEVIWTP 346
           ++GA++I EVI  P
Sbjct: 532 MSGASSIREVIAFP 545



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 63/172 (36%), Gaps = 17/172 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  LL R+   +++  +   + F+++++  L   +P      R F     +    
Sbjct: 130 RRPEMQRHLLLRSRAMAAVTAFLDSSGFVQVETPMLTKSTPEGA---RDFLVPSRLN--- 183

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG ++ + FA  +R+ +     QP+FT L+   +    + 
Sbjct: 184 PGEFYALPQSPQLFKQLLMIAGYDRYYQFARCFRDEDLRADRQPDFTQLDMEMSFVEQDD 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +++    ++    +                      ++  +A  RY +    
Sbjct: 244 VLELQEGLMAHVFKATLDVDLP---------RPFPRLSYFDAMDRYGSDKPD 286


>gi|300214568|gb|ADJ78984.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 590

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +    +  +  +    L E  E              P  E          
Sbjct: 408 LRVAIAKEMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPH 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K+K           F+  L  
Sbjct: 468 KCHAQSYDIVLNGYELGGGSIRIHRRDIQEAMFKALGFIKEK----AEEQFGWFMDALDF 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   G+A+G DR  ML+ G +NI EVI  P
Sbjct: 524 GFPPHGGLALGLDRFAMLLAGKDNIREVIAFP 555



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ RN I  ++  Y  EN F++I++  L   +P     ++            
Sbjct: 134 RRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDYLVPSRVYPGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 194 LPQ------SPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQPEFTQIDIETSFMSAEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++         K    + ++ +  +  + IT  EA  R+   D        + 
Sbjct: 248 IQEMTEGLL---------KRVMKETLDVDIKTPIQRITWNEAMDRF-GSDKPDIRFGMEL 297

Query: 192 PDRHLLYLQA 201
            D       A
Sbjct: 298 KDMSSAVQNA 307


>gi|329120697|ref|ZP_08249359.1| aspartate--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327460494|gb|EGF06830.1| aspartate--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 602

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKEALGVELGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 46/156 (29%), Gaps = 8/156 (5%)

Query: 195 HLLYLQAQQAGIR---VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
            L     ++ G        +     +    + E  E N            P P       
Sbjct: 413 ALRIKIGKEHGAENGYFVDEWKPLWVVDFPMFEYDEENDRWAAMHHPFTSPKPGHEDLME 472

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              +    + +++     E+      +     Q   F       K    E        L 
Sbjct: 473 SDPENCLARAYDMVLNGWEIGGGSIRIHRADIQEKVF----AALKISPEEQQEKFGFLLD 528

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 529 NLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|264676936|ref|YP_003276842.1| aspartyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207448|gb|ACY31546.1| aspartyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 601

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 16/195 (8%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHL--LYLQAQQAGIRVAHDDTWSDIFSRILI 223
           +     +    +   D    +++     R         +++G+          +    + 
Sbjct: 385 KRTGAQDGDLIFFGADKEKIVNDSIGALRLKVGHSEFGKKSGL-FEDKWAPLWVVDFPMF 443

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E +            P                 K +++     EL      +     
Sbjct: 444 EHDEESGRWVAVHHPFTSPKDGHEDLMDTDPGKCIAKAYDMVLNGWELGGGSVRIHRADV 503

Query: 284 QRHRFEKEM----QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           Q   FE       Q++ K            L  L    P   G+A G DRL+ L+TG+++
Sbjct: 504 QAKVFEALNITPEQQRAKFG--------YLLDALQYGAPPHGGLAFGLDRLITLMTGSDS 555

Query: 339 INEVIWTPFSQSNQE 353
           I +VI  P +Q  Q+
Sbjct: 556 IRDVIAFPKTQRAQD 570



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 72/185 (38%), Gaps = 26/185 (14%)

Query: 18  RRPFLLKRNMIQSS-----LREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQD 70
           RRP + +RNM+        +R +  +  FI+I++  L + +P     ++           
Sbjct: 133 RRPVM-QRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVPSRVHDGEFF 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E
Sbjct: 192 ALPQ------SPQLYKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEE 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
           ++      +I+             Q        E   +T  +A  R+ +   DL   L+ 
Sbjct: 246 EIRAIFQRMIKEVF----------QTQLNVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEF 295

Query: 189 PDQPD 193
            +  D
Sbjct: 296 TELTD 300


>gi|239999558|ref|ZP_04719482.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240014734|ref|ZP_04721647.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240017182|ref|ZP_04723722.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
 gi|240121257|ref|ZP_04734219.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
 gi|268595370|ref|ZP_06129537.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268548759|gb|EEZ44177.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|317164806|gb|ADV08347.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 602

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 66/197 (33%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  + + +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTAAQNGDIIFFGADKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|221068933|ref|ZP_03545038.1| aspartyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713956|gb|EED69324.1| aspartyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 601

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 16/195 (8%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHL--LYLQAQQAGIRVAHDDTWSDIFSRILI 223
           +     +    +   D    +++     R         +++G+          +    + 
Sbjct: 385 KRTGAQDGDLIFFGADKEKIVNDSIGALRLKVGHSEFGKKSGL-FEDKWAPLWVVDFPMF 443

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E +            P                 K +++     EL      +     
Sbjct: 444 EHDEESGRWVAVHHPFTSPKDGHEDLMDTDPGKCIAKAYDMVLNGWELGGGSVRIHRADV 503

Query: 284 QRHRFEKEM----QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           Q   FE       Q++ K            L  L    P   G+A G DRL+ L+TG+++
Sbjct: 504 QAKVFEALNITPEQQRAKFG--------YLLDALQYGAPPHGGLAFGLDRLITLMTGSDS 555

Query: 339 INEVIWTPFSQSNQE 353
           I +VI  P +Q  Q+
Sbjct: 556 IRDVIAFPKTQRAQD 570



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 72/185 (38%), Gaps = 26/185 (14%)

Query: 18  RRPFLLKRNMIQSS-----LREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQD 70
           RRP + +RNM+        +R +  +  FI+I++  L + +P     ++           
Sbjct: 133 RRPVM-QRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVPSRVHDGEFF 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E
Sbjct: 192 ALPQ------SPQLYKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEE 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
           ++      +I+             Q        E   +T  +A  R+ +   DL   L+ 
Sbjct: 246 EIRAIFQRMIKEVF----------QTQLNVDLGEFPIMTYQDAAFRFGSDKPDLRVKLEF 295

Query: 189 PDQPD 193
            +  D
Sbjct: 296 TELTD 300


>gi|269986733|gb|EEZ93013.1| tRNA synthetase class II (D K and N) [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 591

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 25/199 (12%)

Query: 13  DFHYRRRPFLLKRNMIQSSL----------REYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D   + R   L+R  + S++          R++F +N F+E+++ +L      ET  R F
Sbjct: 120 DLRLKYRYLDLRRTEMISNIVFRDKVTKLARQFFWDNGFLELETPTLVKDT-YETGARPF 178

Query: 63  STELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
                I+   +   Y L  SP+   + L+ AG +K F  A A+R+ +Q    QPEFT L+
Sbjct: 179 IVPSRIK---KGTFYSLPQSPQIYKQLLMIAGLDKYFQVARAFRDEDQREDRQPEFTQLD 235

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              + +    +M    ++I    +    +               + +   EA  RY   D
Sbjct: 236 LEVSFKDESYIMSLIESLIEKILKSIMNEDIK---------LPFKRLQYGEAIKRY-GSD 285

Query: 182 LGTTLDNPDQPDRHLLYLQ 200
                 + +  D      +
Sbjct: 286 KPDLRYDYEIIDITESMKK 304



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 38/123 (30%), Gaps = 5/123 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
              +N        P  +         +    ++F+L     E+      + +   Q    
Sbjct: 445 TKKLNPSHNPFTAPFTDDIKLLEKEPEKVRGRQFDLVLNGNEIGGGAVRINNADLQLKIL 504

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                +      E        +  L    P+  G A+G DR V ++    +I + I  P 
Sbjct: 505 NMIGMQ----EEEALNTFGFLINALKFGAPEDIGFAIGLDRFVTILKEKQSIRDFILFPK 560

Query: 348 SQS 350
           ++S
Sbjct: 561 TKS 563


>gi|257462976|ref|ZP_05627380.1| aspartyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060593|ref|ZP_07925078.1| aspartyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686269|gb|EFS23104.1| aspartyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 594

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 24/230 (10%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP     L  R+ +  ++R Y  +  F+++D+  L   +P      R F     I    
Sbjct: 135 RRPNMIQNLKMRHRMIMAIRNYMDQAGFLDVDTPILTKSTPEG---ARDFLVPSRINGG- 190

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G EK F  A  +R+ +     QPEFT L+   +  + ++
Sbjct: 191 --TFYALPQSPQIFKQLLMIGGVEKYFQIAKCFRDEDLRADRQPEFTQLDVEMSFVTQDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +   + +   +    +  ++           E +  A A   Y +          + 
Sbjct: 249 VMNEIEGLAKYVFKHVTGEEANYT---------FERMPYAVAMGEYGS---DKPDLRFEV 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             + +  L A+ +    +       I   I+  K             + Y
Sbjct: 297 KLKDISDLAAKSSFKAFSSTVENGGIVKAIVAPKAFEKFSRKLLGEYEDY 346



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 6/147 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN-CCTILDRYPAPESALANIYPADPRFTK 260
           ++ G+   +   +  +    + E  E                  +         D   T 
Sbjct: 418 KELGLIDRNAYKFLWVVDFPMFEYDEEEGRYKAEHHPFTSIKEEDMEKFLQGQTDNIRTD 477

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            ++L     E+      + +   Q   FE+          E       FL       P  
Sbjct: 478 TYDLVLNGSEIGGGSIRISNTEVQAKVFERLSLS----PEEAKEKFGFFLEAFQYGAPPH 533

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            G+A G DR +M++    +I +VI  P
Sbjct: 534 GGLAFGIDRWLMVMLKEESIRDVIPFP 560


>gi|255038351|ref|YP_003088972.1| aspartyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254951107|gb|ACT95807.1| aspartyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 589

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 67/201 (33%), Gaps = 21/201 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +    R Y     FIE+++  L   +P      R F     +   
Sbjct: 132 LRRNVVRKNLQLRHQVARYTRAYLDNLNFIEVETPVLIKSTPEG---ARDFVVPSRMN-- 186

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E
Sbjct: 187 -PGEFYALPQSPQTFKQLLMVAGFDRYYQIVKCFRDEDLRADRQPEFTQIDCEMSFVTQE 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     +IR                      E   +T A+A   Y +    T  +   
Sbjct: 246 DVLNTFEGMIRELFSKVKG----------IDLPEVPRVTYADAMRLYGSDKPDTRFEMQF 295

Query: 191 QPDRHLLYLQAQQAGIRVAHD 211
              +          G  V  D
Sbjct: 296 VELKGDDRDLTSGKGFGVFDD 316



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 48/153 (31%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R   +     +    L+E  E              P PE         
Sbjct: 408 ELRLEIGSRLGLRNPDEYRALWVIDFPLLEFGEEENRWFAMHHPFTSPKPEDVDLLDKNL 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                  +++    +E+      + +   QR  FE      +    E        +    
Sbjct: 468 GQVRANAYDMVINGVEVGGGSVRIFEKELQRKMFEILGFSAE----EAQEQFGFLMNAFE 523

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +GIA GFDRL  +  GA++I + I  P
Sbjct: 524 FGAPPHAGIAFGFDRLCSIFGGADSIRDFIAFP 556


>gi|15676377|ref|NP_273513.1| aspartyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|24212423|sp|Q9K0U5|SYD_NEIMB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|7225693|gb|AAF40903.1| aspartyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316984745|gb|EFV63704.1| aspartyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325140886|gb|EGC63395.1| aspartyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325199651|gb|ADY95106.1| aspartyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 602

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 49/171 (28%), Gaps = 5/171 (2%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +   D    ++      R  + L+  +       +     +    + E  E         
Sbjct: 398 FFGADKAKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEADRYVAVH 457

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P        +        + +++     E+      +     Q   F       K
Sbjct: 458 HPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVF----AALK 513

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 514 ISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|219684410|ref|ZP_03539354.1| aspartyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672399|gb|EED29452.1| aspartyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 586

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E          +   P      +     
Sbjct: 405 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHIFSLPKKRYIASLEKTP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           +    + ++L    +EL +    + +   Q+  F     +K+K  +        FL  L 
Sbjct: 465 NKTLGEIYDLVLNGVELGSGSIRIHNKELQQRIFNIIGFQKEKSED----RFGFFLKALE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 521 YGAPNHGGIAIGIDRLIMLMTKSTSIKDVILFP 553



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 98/299 (32%), Gaps = 17/299 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + V+  F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHLIRNFLVKKNFLELETPTFVKSTPEG---ARDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLLMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +       +        +   R+       + +  + 
Sbjct: 245 IFKLIENMLFLIFKNCLNIKLPKKFKKIAYKTAMNKYGSDKPDTRFELTLQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                      +  I++      +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 305 EFNVFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTQGLY-FTKIENNKFSG 363

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             A    T+  +L        N           E   +   +++ K         IDE+
Sbjct: 364 GIAKFLKTEEQQLIKNYSLENNDIIFFTANKKWEAACKAMGQIRIKIANDL--GLIDEN 420


>gi|194099292|ref|YP_002002386.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|238693212|sp|B4RPA1|SYD_NEIG2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|193934582|gb|ACF30406.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 602

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTAAQNGDIIFFGADKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQG 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|34499195|ref|NP_903410.1| aspartyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|46577181|sp|Q7NRP0|SYD_CHRVO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|34105046|gb|AAQ61402.1| aspartyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 597

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 64/196 (32%), Gaps = 20/196 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R +  +  FI+I++  L   +P     ++            
Sbjct: 131 RRPAMQKNLRLRYKVAMGVRNHLDKQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +M     + +   +                      +T  +A   Y +   D+   L   
Sbjct: 245 IMDITEGMTKEIFQDVLGVTLPT----------FPRMTYGDAMFYYGSDKPDMRVALKFT 294

Query: 190 DQPDRHLLYLQAQQAG 205
           +  D           G
Sbjct: 295 ELTDVMKSEEFKVFRG 310



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 44/156 (28%), Gaps = 8/156 (5%)

Query: 195 HLLYLQAQQAGIR---VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
            L      + G+       +     +    + E  E       C      P P       
Sbjct: 410 ALRIKIGHEHGLENGYFVKEWRPLWVVDFPMFEHDEEEDRWTACHHPFTSPKPGHEDLMA 469

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
                   + +++     E+      +     Q   F       K    E        L 
Sbjct: 470 TDPGKCLARAYDMVLNGWEIGGGSIRIHRADIQEKVF----GALKISPEEQQNKFGFLLD 525

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DRLV L+ GA +I +VI  P
Sbjct: 526 NLKFGAPPHGGLAFGLDRLVTLMCGAESIRDVIAFP 561


>gi|325269911|ref|ZP_08136521.1| aspartate--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324987884|gb|EGC19857.1| aspartate--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 585

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 74/223 (33%), Gaps = 10/223 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +    QFIE+++  L   +P      R F     +    
Sbjct: 132 RREAVRKNLELRHRMTILIRNFLDAQQFIEVETPVLIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + R               +    + E      ++       ++    +D+    
Sbjct: 247 INLFEEMARHLFREIRG--VELPRLEQMTWHEAMKRFGSDKPDLRFGMEFVELMDDLKGT 304

Query: 193 DRHLLYLQAQQAGIRVAHD--DTWSDIFSRILIEKIEPNLGIN 233
               ++ +A   G  V     D      + +      P +G  
Sbjct: 305 GTFSVFNEADYIGGIVVPGCADYSRKQLNELTDFVKRPQVGAQ 347



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 8/128 (6%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +     E    +            +  L + +P   R  K ++     IE+      + D
Sbjct: 432 LFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEQVR-AKAYDFVCNGIEVGGGSLRIHD 490

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
              Q   FE           E       FL        P  +G+A G DR V ++ G ++
Sbjct: 491 TQLQEKMFEVL-----GFTPERAEAQFGFLMNAFKYGAPPHAGLAFGLDRFVSILAGLDS 545

Query: 339 INEVIWTP 346
           I + I  P
Sbjct: 546 IRDCIAFP 553


>gi|296315098|ref|ZP_06865039.1| aspartate--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296838009|gb|EFH21947.1| aspartate--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 602

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 66/207 (31%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPAMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F++       +   +  AEA   Y   D      N   
Sbjct: 245 IMDITE----------GMAKQVFKDALNVDLGDFPRMPYAEAMF-YYGSDKPDMRINLKF 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L    +    R A D     + 
Sbjct: 294 TELTDLMKTEEFKVFRGAADMKGGRVV 320



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|254775890|ref|ZP_05217406.1| aspartyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 591

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 71/212 (33%), Gaps = 32/212 (15%)

Query: 3   QIP---SQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P    +P    +   + R            +  R+ + ++ RE    + F+EI++ ++
Sbjct: 106 PLPFQLDEPAG-EELRLKYRYLDLRRDAPAAAIRLRSKVNAAAREVLARHDFVEIETPTI 164

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              +P      R F     +        Y L  SP+   + L+ AG E+ +  A  +R+ 
Sbjct: 165 TRSTPEG---ARDFLVPARLH---PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDE 218

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT L+   +    E ++     I+     +   +                 
Sbjct: 219 DFRADRQPEFTQLDMEMSFVDAEDVIAISEEILAALWALIGYE----------IPRPIPR 268

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I+ A+A ARY +                    
Sbjct: 269 ISYADAMARYGSDKPDLRFGLELVECSEFFKD 300



 Score = 75.8 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 15/94 (15%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLAC 312
              +++     E+      +     Q   F        E +EK     E +         
Sbjct: 471 ADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDHAEAREKFGFLLEAFTF------- 523

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA G+DR+  L++  ++I EVI  P
Sbjct: 524 --GAPPHGGIAFGWDRINALLSRVDSIREVIAFP 555


>gi|305681447|ref|ZP_07404254.1| aspartate--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659652|gb|EFM49152.1| aspartate--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 593

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 64/196 (32%), Gaps = 26/196 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L  R+    + R    ++ F+EI++ +L   +P      R 
Sbjct: 123 ETRLKYRYLDLRRPAQGGALRLRSEANKAARRVLEKHDFVEIETPTLTRSTPEG---ARD 179

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEF  L+
Sbjct: 180 FVVPARL--KPGSWYALPQSPQLFKQLLMVAGMERYYQLARCYRDEDFRADRQPEFMQLD 237

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    E ++     I+    ++    I +              +T AEA   Y +  
Sbjct: 238 MEMSFVDQEDIIAIVEEILVALWQLIGYTIPT----------PIPRMTYAEAMRDYGSDK 287

Query: 182 LGTTLDNPDQPDRHLL 197
                D          
Sbjct: 288 PDLRFDIKLVECTEFF 303



 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 15/159 (9%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNL------GINCCTILDR-YPAPESALAN 250
             A++ G+    D  ++ +    +     E         G +  T +   + AP     +
Sbjct: 406 EIARKLGLIKEGDWAFTWVVDAPMFEPSAEAKASGDVALGHSAWTAVHHAFTAPTDECLD 465

Query: 251 IYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
            +  DP       +++     E+      +     Q   F+           E       
Sbjct: 466 TFDTDPGSALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGIT----EEEAQEKFGF 521

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L       P   G+A+G+DR+V L+ G ++I +VI  P
Sbjct: 522 LLDAFAFGAPPHGGVALGWDRIVSLLGGFDSIRDVIAFP 560


>gi|197105320|ref|YP_002130697.1| aspartyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|238690158|sp|B4RCT1|SYD_PHEZH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|196478740|gb|ACG78268.1| aspartyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 592

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 69/210 (32%), Gaps = 28/210 (13%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    + R+ +  S+R   ++  F+E  +  L 
Sbjct: 111 PLPVFGEPEYPEDIRLKYRYLDLRRETLHRNIVLRSQVIQSIRRRMIDQGFLEFQTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     +        Y L  +P+   + L+ +G ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRLH---PTKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                  EF  L+   +  +         ++      V +     F             I
Sbjct: 225 LRADRSLEFYQLDVEMSFVT-------QDDVFAAIEPVMHGVFTEFGEGKPVTPYPFPRI 277

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
              EA A+Y   D     +  +  D    +
Sbjct: 278 PYREAIAKY-GSDKPDLRNPIEMQDVSEHF 306



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 47/144 (32%), Gaps = 11/144 (7%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           +  I    + E  +     +        P  E               ++++     ELC+
Sbjct: 429 FCWIVDFPMFEWSDEEKKYDFSHNPFSMPQGELDALLNKEPGEIVAYQYDIVCNGHELCS 488

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRL 329
                  P      FE         Y     ++E F   L       P   G+A G DR+
Sbjct: 489 GAIRNHRPDVMLKAFEI------AGYGPE-VVEEQFGGMLNAFRHGAPPHGGLAPGIDRI 541

Query: 330 VMLVTGANNINEVIWTPFSQSNQE 353
           VML+ G   I EVI  P +Q  Q+
Sbjct: 542 VMLLAGETAIREVIAFPLNQQGQD 565


>gi|206601588|gb|EDZ38071.1| Aspartyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 584

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 21/172 (12%)

Query: 18  RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RR  L K    RN +   +R Y  ++ F E+++  L   +P      +     E      
Sbjct: 134 RRETLRKSLKLRNDLTHFIRNYLHDHAFWEVETPILTRSTPEGARDFLVPSRLEKGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + +Q
Sbjct: 194 LPQ------SPQLFKQILMVGGIERYYQIARCFRDEDLRADRQPEFTQVDIEASFLTMDQ 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +     +I+   E                      +T  EA  +Y +    
Sbjct: 248 FLYLMEGMIQSIFEKFTG---------FRADRPFVRLTYREAMEKYGSDKPD 290



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 48/147 (32%), Gaps = 7/147 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            +  +R + D +   +    L E  E    +         P  E             +  
Sbjct: 414 DRLKLRRSRDYSLLWVVDFPLFEWNEEENRLEALHHPFTAPRREDIPLLESDPLSVRSDA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL-TEMPQS 319
           ++L     E+        +P  Q   FE     K  I  E         L  L    P  
Sbjct: 474 YDLVLNGTEIGGGSVRNFEPHLQERLFE-----KIGISPESARARFGFLLDALTYGAPPH 528

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            G+A G DR VML+ G ++I +VI  P
Sbjct: 529 LGMAFGLDRFVMLLAGCDSIRDVIAFP 555


>gi|317498116|ref|ZP_07956418.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894593|gb|EFV16773.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 597

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 59/168 (35%), Gaps = 8/168 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L  RN +   +R +  +  F+EI++  L + +P     ++            
Sbjct: 141 RRPNLQRNLRIRNDVTRMVRNFLGDEGFLEIETPVLGKSTPEGARDYLVPSRVHPGEFYG 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMCSGFDRYYQIAKCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++     +++   +           +        +     +   R+  
Sbjct: 255 VIDVNERLLKKIFKEVLDIDVQLPMLRMTYKEAMDRFGSDKPDMRFGM 302



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 5/151 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A+Q  +       +  +    L+E  +              P  E              
Sbjct: 420 IAKQYDMIDKSQYKFLWVTEFPLLEWSDEQNRYTAMHHPFTMPFEEDLEFIDERPGDVRA 479

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           K +++     EL      +     Q   FE     K+    + Y      L      +P 
Sbjct: 480 KAYDIVLNGTELGGGSIRIHQDDIQEKMFEALGFTKE----DAYNRFGFLLDAFKFGVPP 535

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +G+A G DRLVM +TG ++I +VI  P  +
Sbjct: 536 HAGLAYGLDRLVMWLTGEDSIRDVIAFPKVK 566


>gi|161870607|ref|YP_001599780.1| aspartyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189082106|sp|A9M257|SYD_NEIM0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|161596160|gb|ABX73820.1| aspartyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 602

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 66/207 (31%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPAMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F++       +   +  AEA   Y   D      N   
Sbjct: 245 IMDITE----------GMAKQVFKDALNVDLGDFPRMPYAEAMF-YYGSDKPDMRINLKF 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L    +    R A D     + 
Sbjct: 294 TELTDLMKTEEFKVFRGAADMKGGRVV 320



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|15639969|ref|NP_219422.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189026208|ref|YP_001933980.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094395|sp|O83950|SYD_TREPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238689353|sp|B2S4M2|SYD_TREPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3323310|gb|AAC65942.1| aspartyl-tRNA synthetase (aspS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018783|gb|ACD71401.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291060342|gb|ADD73077.1| aspartyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 602

 Score = 99.3 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 46/136 (33%), Gaps = 15/136 (11%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           I    L E        +    +   P  +                ++L     EL +   
Sbjct: 446 IVDFPLFEWNPAENKWDPAHHMFSAPQEQYLETLEQDPGSVKGDLYDLVLNGYELASGSI 505

Query: 277 ELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLV 330
            + D   Q+  F+      +E  EK     E +             P   GIA G DRLV
Sbjct: 506 RIHDTQLQKRIFKIVGLDPEEAGEKFGFLTEAFK---------YGAPPHGGIAHGLDRLV 556

Query: 331 MLVTGANNINEVIWTP 346
           ML+TG+ +I +VI  P
Sbjct: 557 MLMTGSESIRDVIAFP 572



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 6/195 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDHI 72
              R +  +  R+ +  ++R++     FIEI++ + +  +P      R F     +    
Sbjct: 150 RSQRMQERIALRSRVALAIRQFLSMKGFIEIETPTFICSTPEG---ARDFVVPSRV--CP 204

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +  S + +
Sbjct: 205 GRFYALPQSPQLYKQLLMVAGFDRYFQLARCYRDEDARGDRQPEFTQIDLEMSFVSRDDV 264

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M+   +++R     +                  +     +   R+  +            
Sbjct: 265 MRVNEDMLRYVFRTSIGVELPTFFPRLTYAQALDQYGTDKPDMRFKPVLQNADFMGMLGT 324

Query: 193 DRHLLYLQAQQAGIR 207
                 + AQ   IR
Sbjct: 325 FTPFEEVVAQGGSIR 339


>gi|312898874|ref|ZP_07758262.1| aspartyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620036|gb|EFQ03608.1| aspartyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 599

 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ GI   +   ++ +    + E  E              P  E         
Sbjct: 416 ELRKEMARRTGIIDENAFAFTWVVDFPMFEYDEEEKRYTAMHHPFTAPRDEDLDKLETDQ 475

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
              + K ++L    +EL      +  P  Q+  F    +       E        L    
Sbjct: 476 SKVYAKAYDLVLNGVELGGGSLRIYQPDIQQRVF----KAIGLTDEEAKQKFGFLLRAFE 531

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A G DR++ML+    +I +VI  P +Q+  +
Sbjct: 532 YGAPPHGGLAFGLDRMIMLMLKRKSIRDVIAFPKTQNAID 571



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 71/194 (36%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ RN ++ ++R++  ++ FI+I++  L + +P     ++            
Sbjct: 143 RRPEMQNNLIMRNKVKHAMRDFLNQHGFIDIETPELCKSTPEGARDYLVPSRVNEGKFYA 202

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E 
Sbjct: 203 LPQ------SPQIFKQLLMISGMDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSQED 256

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +I    + A                  E     +   R+ ++      +    
Sbjct: 257 ILQLTEEMIGYVFKQALGYEIPGPIQRMTWDYAMENYGSDKPDLRF-DMKFKDITELVKD 315

Query: 192 PDRHLLYLQAQQAG 205
            +  +        G
Sbjct: 316 TEFKVFRNVVDAGG 329


>gi|307128517|ref|YP_003880547.1| aspartyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
 gi|306482979|gb|ADM89849.1| aspartyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
          Length = 565

 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 70/211 (33%), Gaps = 26/211 (12%)

Query: 10  WNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI 59
            N D   +      RR  +    + RN I   +R +F++  FIEI++  L  +P  +   
Sbjct: 116 GNEDIRMKYRYLDIRRDIIKNNIILRNKIYIEIRNFFLKENFIEIETPILI-NPTTD-GA 173

Query: 60  RAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           R F              Y L  SP+   + L+  G +K F     +R+ +     QPEFT
Sbjct: 174 RNFYVPYRKNPGF---FYSLSQSPQLLKQLLMIGGIDKYFQIVKCFRDEDFRSDRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +      ++      I    +                 ++   +T  EA  +Y 
Sbjct: 231 QIDCEMSFVDENDILNIFEKFIHFLLKKIKG----------INLNKFPILTYEEAMNKYG 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
           +       D            +    GI + 
Sbjct: 281 SDKPDIRFDMKLFELNDFSNQKEYIMGISLP 311



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 51/158 (32%), Gaps = 3/158 (1%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                +++  +      +   I +    +  +     N        P            +
Sbjct: 388 FRIEMSKRLNLIKKKIFSPLWIRNFPYFKWNKEKSCYNSLHHPFTSPEIRDLKFLKENPE 447

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
              +K ++L     E+      + +   Q+  F      KKKI  E   + + F      
Sbjct: 448 KIKSKSYDLVINGKEIGGGSIRINNSKIQKIIFNHLGFSKKKIEKEFGFLIKSF---KYG 504

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   GIA G DRL+ +    +NI + I  P  Q  ++
Sbjct: 505 APPHGGIAFGLDRLISVFAYKDNIRDFIAFPKGQDGKD 542


>gi|306826288|ref|ZP_07459622.1| aspartate--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431564|gb|EFM34546.1| aspartate--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 587

 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 44/150 (29%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +       +  +    + E  E              P  E+             
Sbjct: 407 IAKELDLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETVHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 68/198 (34%), Gaps = 27/198 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLKNLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +              +   +A A Y + 
Sbjct: 236 DLETSFLSEQEIQDITEGLIARVMKETKGIEVT---------LPFPRMKYDDAMALYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLY 198
              T  D   Q    ++ 
Sbjct: 287 KPDTRFDMLLQDLTEVVK 304


>gi|256087094|ref|XP_002579712.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238665189|emb|CAZ35951.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 401

 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 47/335 (14%), Positives = 92/335 (27%), Gaps = 70/335 (20%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP---- 75
             L  R  I+  +R+      ++E+D+  L  +    T  + F  +    +  R+     
Sbjct: 123 AMLRMRAHIKRIVRKVMSSCDYLEVDTPILTSTDCEGTG-QMFEVQAPALNETRESDSSS 181

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
           +YL  S +   + L     +        +     G   + +                   
Sbjct: 182 VYLTGSAQMHLESLALGLSKNDLLLIRTF----LGSQSESDSH----------------- 220

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
                 C   + +  +     +          I+  EA  +Y N ++ T      +P   
Sbjct: 221 ------CKRLLIDSALELRDVLETMLKQPFIRISYFEAM-KYLNKEMDTVDLTTSRP--- 270

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                                  ++    +I   +G N    +  +P            D
Sbjct: 271 --------------------RDLNKKEEHRILDWVGGNRPVFITHFPMELKPFYCQS-VD 309

Query: 256 PRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
               +  +L    I EL  A          + R +            T   D  ++  L 
Sbjct: 310 GIKAECADLLFPGIGELVGASVRENVASRLQTRMKS--------NRSTNQSDW-YIN-LR 359

Query: 315 EM--PQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                   G  +GF+RL+  V G  NI + +  P 
Sbjct: 360 GTGSVPHGGFGLGFERLMQFVLGIANIRDTVAFPR 394


>gi|225857687|ref|YP_002739198.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254781757|sp|C1CN60|SYD_STRZP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225726232|gb|ACO22084.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 587

 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 45/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P   +A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEGTAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSTEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEKEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|59801827|ref|YP_208539.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|59718722|gb|AAW90127.1| putative aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 516

 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 66/197 (33%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  + + +R Y     FI+I++  L   +P     ++            
Sbjct: 45  RRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 104

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 105 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 158

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 159 IMDITEGMAKQVFKDALNVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 216

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 217 EEFKVFRGAADMKGGRV 233



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 301 ERTAAQNGDIIFFGADKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 360

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 361 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQG 420

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 421 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 476

Query: 345 TP 346
            P
Sbjct: 477 FP 478


>gi|325136852|gb|EGC59450.1| aspartyl-tRNA synthetase [Neisseria meningitidis M0579]
 gi|325142900|gb|EGC65262.1| aspartyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325198852|gb|ADY94308.1| aspartyl-tRNA synthetase [Neisseria meningitidis G2136]
 gi|325205530|gb|ADZ00983.1| aspartyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 602

 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 66/207 (31%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F++       +   +  AEA   Y   D      N   
Sbjct: 245 IMDITE----------GMAKQVFKDALNVDLGDFPRMPYAEAMF-YYGSDKPDMRINLKF 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L    +    R A D     + 
Sbjct: 294 TELTDLMKTEEFKVFRGAADMKGGRVV 320



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|325134831|gb|EGC57467.1| aspartyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 602

 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 66/207 (31%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPTMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F++       +   +  AEA   Y   D      N   
Sbjct: 245 IMDITE----------GMAKQVFKDALNVDLGDFPRMPYAEAMF-YYGSDKPDMRINLKF 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L    +    R A D     + 
Sbjct: 294 TELTDLMKTEEFKVFRGAADMKGGRVV 320



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 49/182 (26%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+          +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKTKVVNEAIGALRIKVGLEHGAENGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|269123829|ref|YP_003306406.1| aspartyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315155|gb|ACZ01529.1| aspartyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 587

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 20/177 (11%)

Query: 17  RRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
           RRR  L    KRN +  S+RE+  +  F++ID+  L + +P      R F     +Q   
Sbjct: 131 RRRKMLENIKKRNDMLFSIREFMNKEGFLDIDTPILGKATPEG---ARDFIVPSRVQ--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ AG +K +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGEFYALPQSPQLFKQTLMVAGIDKYYQIAKCFRDEDLRADRQPEFTQLDLEMSFIHQED 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           ++     + +        ++              E I+   A   Y +       D 
Sbjct: 245 ILNLVERLAKKVFIDVTGEVED---------KPFERISYDYAMNNYGSDKPDLRFDM 292



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 52/161 (32%), Gaps = 6/161 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC-CTILDRYPAPESALANIYP 253
            L     ++ G+       +  +    + E  E                       +   
Sbjct: 405 ALRLKLGEELGLIDKDKFKFVWVLDFPMFEYSEEEGRYQAAHHPFTSIKKDHIKYLDTKE 464

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
            D   ++ ++L     E+      + D   Q   F++    K+    E       FL  L
Sbjct: 465 YDKILSESYDLVLNGYEIGGGSIRIHDSSLQSKVFDELGLSKE----EQLDKFGFFLETL 520

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              +P   G+A G DR +M +   N+I EVI  P +   Q+
Sbjct: 521 SYGVPPHGGLAFGLDRWLMAMLKENSIKEVIPFPKTNKGQD 561


>gi|240126291|ref|ZP_04739177.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268684875|ref|ZP_06151737.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268625159|gb|EEZ57559.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 602

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTAAQNGDIIFFGADKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|240116260|ref|ZP_04730322.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|240128757|ref|ZP_04741418.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268601925|ref|ZP_06136092.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268687142|ref|ZP_06154004.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268586056|gb|EEZ50732.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268627426|gb|EEZ59826.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 602

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGDFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTAAQNGDIIFFGADKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|168179548|ref|ZP_02614212.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182669835|gb|EDT81811.1| aspartyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 593

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 66/196 (33%), Gaps = 18/196 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +   + R+     +R++  EN F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 KGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQPEFTQIDMELSFVEEDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +              +     E +    A  +Y   D        + 
Sbjct: 253 VIELNERLLAKVFKEIGG---------IDVKLPIERMPYKIAMEKY-GSDKPDLRFGMEI 302

Query: 192 PDRHLLYLQAQQAGIR 207
            D       ++    +
Sbjct: 303 NDLTEAVKNSEFKVFK 318



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 49/150 (32%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-- 257
            A++  I   ++  +  I    L+   E             + A       +   +P   
Sbjct: 417 IAKELDIINKNEFRFVWITEFPLLAYNEEEGRYQAEHHP--FTAIMDEDIELLDTEPGKV 474

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             K +++     EL      + D   Q   F      K+K     +      L       
Sbjct: 475 RAKAYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEK----AWERFGFLLEAFKFGP 530

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DR++M + G  NI +VI  P
Sbjct: 531 PPHGGLAYGLDRMIMFLAGTENIKDVITFP 560


>gi|73945459|ref|XP_857854.1| PREDICTED: similar to Asparaginyl-tRNA synthetase, cytoplasmic
           (Asparagine--tRNA ligase) (AsnRS) isoform 3 [Canis
           familiaris]
          Length = 559

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 99/312 (31%), Gaps = 40/312 (12%)

Query: 41  FIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIF 98
           F ++   +L      G  T        L   D+  +  +L  S +   +  + A    +F
Sbjct: 276 FEQVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFLTQSSQLYLETCIPA-LGDVF 326

Query: 99  CFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
           C A ++R  +     H  E+T +E      ++E+L+    +++    +   +        
Sbjct: 327 CIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFEELLNRLEDLVCDVVDRVLKSPAGSIVR 386

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           + NP  +P                    ++  D       +   ++ G      +   + 
Sbjct: 387 DLNPNFKPPKRPF-------------KRMNYSDAIVWLKEHNIKKEDGTFYEFGEDIPEA 433

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFE-LYACNIELCNAC 275
             R++         IN   +L R+P    S      P D R T+  + L     E+    
Sbjct: 434 PERLM------TDSINEPILLCRFPVEIKSFYMQRCPEDSRLTESVDVLMPNVGEIVGGS 487

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTG 335
             + D  E    ++     ++ I    Y    D            G  +G +R +  +  
Sbjct: 488 MRIWDSEEILAGYK-----REGIDPTPYYWYTD--QRKYGTCPHGGYGLGLERFLTWILN 540

Query: 336 ANNINEVIWTPF 347
             +I +V   P 
Sbjct: 541 RYHIRDVCLYPR 552


>gi|326336300|ref|ZP_08202471.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691474|gb|EGD33442.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 582

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 73/224 (32%), Gaps = 27/224 (12%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+ +   +R Y     FIE+++  L   +P      R F     +        Y
Sbjct: 138 RENLIFRHKVGMMVRNYLSAQGFIEVETPVLIKSTPEG---ARDFVVPSRMNAG---EFY 191

Query: 78  -LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   + L+  G +K F     +R+ +     QPEFT ++   +    E +++  
Sbjct: 192 ALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDIIQTF 251

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGTTLDN 188
             + +   +                F     +T AEA   Y          +  G   D 
Sbjct: 252 EGLAKHLLKELKGL----------EFGAFPRMTYAEAMKTYGNDKPDIRFGMKFGELNDL 301

Query: 189 PDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLG 231
               D  +        GI V   +         ++     P +G
Sbjct: 302 AQHRDFKVFNEAELVVGIAVPGANSYTRKEIDALVEWVKRPQIG 345



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R         +    L+E  E              P PE         
Sbjct: 404 ALRMELAERLGLRNPDVYAPLWVVDFPLLEWNEEENRFFAMHHPFTSPKPEDIPLLDTDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  ++L     E+      + D   Q   F           ++        +    
Sbjct: 464 GAVRANAYDLVLNGNEVGGGSIRIFDRELQAKMF----ALLGFTPDQAQAQFGFLMNAFR 519

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A GFDRLV L+ G   I + I  P
Sbjct: 520 YGAPPHGGLAFGFDRLVALLGGQETIRDFIAFP 552


>gi|325132854|gb|EGC55533.1| aspartyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325138834|gb|EGC61385.1| aspartyl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|325203570|gb|ADY99023.1| aspartyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 602

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 66/207 (31%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F++       +   +  AEA   Y   D      N   
Sbjct: 245 IMDITE----------GMAKQVFKDALNVDLGDFPRMPYAEAMF-YYGSDKPDMRINLKF 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L    +    R A D     + 
Sbjct: 294 TELTDLMKTEEFKVFRGAADMKGGRVV 320



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTGTQNGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|170730261|ref|YP_001775694.1| aspartyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|238687919|sp|B0U2I5|SYD_XYLFM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167965054|gb|ACA12064.1| aspartyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 589

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 68/211 (32%), Gaps = 30/211 (14%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   D   +      RRP +      R  +  +LR +   + F +I++  L 
Sbjct: 110 PLPFHAHENPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A  S   +      +IR   +                      +
Sbjct: 224 LRADRQLEFTQLDMEFAFVSERDVQDFVEEMIRRVFKEVAGIELDTT---------FPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           T  EA  R+   D      N +  D   L  
Sbjct: 275 TWKEAMRRF-GSDKPDLRINLELIDVAALVA 304



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 51/157 (32%), Gaps = 14/157 (8%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-IYPA 254
            L L+A +    +  D     +    + E  E              PA    +      A
Sbjct: 408 ALRLKAGKDFALITADWRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAIDDIDELRAHA 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
               ++ +++     E+      +  P  QR  FE     E + + K            L
Sbjct: 468 RTALSRGYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFG--------FLL 519

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 520 DALNYGAPPHGGIAFGIDRIAALIAGTESIRDVIPFP 556


>gi|121635393|ref|YP_975638.1| aspartyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166225367|sp|A1KVG2|SYD_NEIMF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120867099|emb|CAM10865.1| aspartyl-tRNA synthetase [Neisseria meningitidis FAM18]
          Length = 602

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 66/207 (31%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F++       +   +  AEA   Y   D      N   
Sbjct: 245 IMDITE----------GMAKQVFKDALNVDLGDFPRMPYAEAMF-YYGSDKPDMRINLKF 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L    +    R A D     + 
Sbjct: 294 TELTDLMKTEEFKVFRGAADMKGGRVV 320



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 48/171 (28%), Gaps = 5/171 (2%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +   D    ++      R  + L+          +     +    + E  E         
Sbjct: 398 FFGADKAKVVNEAIGALRIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVH 457

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P        +        + +++     E+      +     Q   F       K
Sbjct: 458 HPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVF----AALK 513

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 514 ISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|167767120|ref|ZP_02439173.1| hypothetical protein CLOSS21_01638 [Clostridium sp. SS2/1]
 gi|167711095|gb|EDS21674.1| hypothetical protein CLOSS21_01638 [Clostridium sp. SS2/1]
 gi|291559551|emb|CBL38351.1| aspartyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 597

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 59/168 (35%), Gaps = 8/168 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L  RN +   +R +  +  F+EI++  L + +P     ++            
Sbjct: 141 RRPNLQRNLRIRNDVTRMVRNFLGDEGFLEIETPVLGKSTPEGARDYLVPSRVHPGEFYG 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQLFKQLLMCSGFDRYYQIAKCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++     +++   +           +        +     +   R+  
Sbjct: 255 VIDVNERLLKKIFKEVLDIDVQLPMLRMTYKEAMDRFGSDKPDMRFGM 302



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 5/151 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A+Q  +       +  +    L+E  +              P  E              
Sbjct: 420 IAKQYDMIDKSQYKFLWVTEFPLLEWSDEQNRYTAMHHPFTMPFEEDLEFIDERPGDVRA 479

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           K +++     EL      +     Q   FE     K+    + +      L      +P 
Sbjct: 480 KAYDIVLNGTELGGGSIRIHQDDIQEKMFEALGFTKE----DAHNRFGFLLDAFKFGVPP 535

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +G+A G DRLVM +TG ++I +VI  P  +
Sbjct: 536 HAGLAYGLDRLVMWLTGEDSIRDVIAFPKVK 566


>gi|330836108|ref|YP_004410749.1| aspartyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748011|gb|AEC01367.1| aspartyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 618

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 44/153 (28%), Gaps = 6/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     +  G+ +     +  I    L E  E          +   P  E         
Sbjct: 437 AIRSKLGKDLGL-IRPGFEFCWIIDFPLFEFNEETEHWEAAHHMFSMPQTEYISTLESDP 495

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  ++L     E+ +    + D   Q+  F            E        L    
Sbjct: 496 GSVKGDLYDLVLNGYEVASGSIRIHDVELQKRIFRICNFS----DEEAEKRFGFLLDAFR 551

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DR+VM++    +I EVI  P
Sbjct: 552 YGAPPHGGIAPGIDRMVMIMAEQTSIKEVIAFP 584



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  +  R+    ++R+Y     F EI++ +L   +P      R F     +  +  K   
Sbjct: 166 QKRIRLRHEFVKAIRQYLYTTNFYEIETPTLIKSTPEG---ARDFLVPSRL--YPGKFYA 220

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+ +G ++ F  A  +R+ +     Q EFT L+   +  + + +++   
Sbjct: 221 LPQSPQLLKQILMVSGFDRYFQIARCYRDEDARGDRQLEFTQLDMEMSFVTRDDVLELIE 280

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            +     +           +N     +   +T  ++   Y N       D P
Sbjct: 281 KLFGYVFDKV---------MNYRLPVKFRRLTYHDSMNTYGNDKPDLRFDLP 323


>gi|291515552|emb|CBK64762.1| aspartyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 584

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 66/199 (33%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  ++ R+ +   +R +  +  F+EI++  L   +P      R F     +    
Sbjct: 132 RRPPLQRNMILRHKMAQEIRRFLSDEGFLEIETPCLVGSTPEG---ARDFVVPSRMS--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG +K F     +R+ +     QPEFT ++   +    E +
Sbjct: 187 NQFYALPQSPQTLKQLLMVAGYDKYFQIVRCFRDEDLRADRQPEFTQIDCEMSFVEQEDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++      +           +              +   EA  +Y +             
Sbjct: 247 LEIFERWAKHMFRHVMGIELT---------EPLRRMPWIEAMEKYGSDKPDLRFGM---- 293

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   +   A+  G  V  +
Sbjct: 294 EFAEITDLAKGHGFSVFDE 312



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 45/160 (28%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    AQQ G+R         +    L E  +              P  E         
Sbjct: 403 ALRLEVAQQLGLRDPQKFAPLWVVDFPLFEWDDETQRYYAVHHPFTSPKLEDVQYLDSDP 462

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  ++      E+      + D   Q   FE           E        +    
Sbjct: 463 GRVRANAYDFVCNGTEIGGGSIRIHDSKLQEKMFE----LLGFTPEEAQKRFGFLMNAFK 518

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A GFDRL  L  G+ +I + I  P + + ++
Sbjct: 519 YGAPPHGGLAFGFDRLCSLFGGSESIRDYIAFPKNNAGRD 558


>gi|172040629|ref|YP_001800343.1| aspartyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|238064704|sp|B1VDL1|SYD_CORU7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|171851933|emb|CAQ04909.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 606

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L  R+   ++ R+    + F EI++ +L   +P      R F     ++   
Sbjct: 134 RRASQGDALRLRSKANAAARKVLERHDFTEIETPTLTRSTPEGA---RDFLVPARLK--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 188 PGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     I+      A  ++ +              +T A+A   Y +       D    
Sbjct: 248 VIALAEEILTEVWSTAGYEVQT----------PFPRMTYADAMRLYGSDKPDLRFDIQIT 297

Query: 192 PDRHLLYL 199
                   
Sbjct: 298 ECTEFFKD 305



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 15/113 (13%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE----KEMQE 294
           + +P+    + +  DP       +++     E+      +     Q   F+     + + 
Sbjct: 456 FTSPKPEFLDSFDQDPGSALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFQVMGISQEEA 515

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           ++K            L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 516 REKFG--------FLLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 560


>gi|187918313|ref|YP_001883876.1| aspartyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|238689288|sp|B2S0F0|SYD_BORHD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119861161|gb|AAX16956.1| aspartyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 585

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 76/228 (33%), Gaps = 8/228 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               ++  ++ R+ +   +R Y  +  F+E+++ +    +P      R F     I    
Sbjct: 131 RREEQKQKIILRSKVTHIIRNYLTKKDFLELETPTFVKSTPEG---ARDFLVPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   +  + AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGHFYALPQSPQIYKQLTMVAGLDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFIKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +                +   RY  +    +      
Sbjct: 245 IFKLMENLMFTIFKNTLNIALPKKFKKMTYKHAMNTYGSDKPDTRYELLIQDMSKHFKKS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                  +   +  I+       +  FSR  I  +E +  I     L 
Sbjct: 305 SFNVFQDMLQNKGTIKALIIKNQAHNFSRSKINNLEEHAKIYKARGLY 352



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 57/153 (37%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A +  +   +   +  I+   L E  E          +   P  +         
Sbjct: 404 QVRIKIATELNLINKNIFEFLWIYDFPLFEYDEDTKSYQAAHHMFSLPKQKYIHTLESNP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L    +EL +    +     Q+  F   +  K +I  E +     FL  L 
Sbjct: 464 SKVLGEVYDLVLNGMELGSGSIRVHTRELQQRIFNI-VGFKNEIAEERFG---FFLKALE 519

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T +++I +VI  P
Sbjct: 520 YGAPIHGGIAIGIDRLLMLMTHSSSIKDVILFP 552


>gi|116327961|ref|YP_797681.1| aspartyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330842|ref|YP_800560.1| aspartyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120705|gb|ABJ78748.1| Aspartate--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124531|gb|ABJ75802.1| Aspartate--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 604

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 66/190 (34%), Gaps = 16/190 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  ++KR+    ++R Y  + +F+EI++  L   +P      R F     +    
Sbjct: 145 RREELKNRMIKRHEFIFAIRNYLSKRKFVEIETPILNKSTPEG---ARDFLVPSRLN--P 199

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G E+ F     +R+ +     QPEFT L+   +  + E++
Sbjct: 200 NQFYALPQSPQIFKQILMVGGMERYFQIVKCFRDEDLRADRQPEFTQLDMEFSFVNQEEI 259

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + +   ++    +            N    +    +T   A   Y   D           
Sbjct: 260 LSEIEGLVSTIYKEV---------FNIQLTTPFPRMTYKTAIEEY-GSDKPDLRFGMKLV 309

Query: 193 DRHLLYLQAQ 202
           D   +     
Sbjct: 310 DVSEIVKDCD 319



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 66/231 (28%), Gaps = 18/231 (7%)

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV----AEAFARYANIDL 182
           E Y   +         A      +             E + I+      E    +   D 
Sbjct: 350 EDYTAWLNRDYKAKGLAYMKHGSEGLESTITKRFKKEELDAISKVCGSKEGDMLFFGADE 409

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              +++     R  L  + +       ++   + I    + E  + +   +        P
Sbjct: 410 KEIVNHSLGALRLKLSERFET---PKQNEINITWIVDFPMFEWNKDHKRWDALHHPFTSP 466

Query: 243 APESA------LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           + ES             A     K ++L    +E+      +     Q   F    +   
Sbjct: 467 SDESIPFFESMETLQKNASKATAKAYDLVMNGVEIGGGSIRIHSREIQNQVF----RVLG 522

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G+A G DR++ML+T   +I +VI  P
Sbjct: 523 IGEEEAREKFGFLLEALEFGAPPHGGLAFGIDRMLMLLTEGKSIRDVIAFP 573


>gi|254882093|ref|ZP_05254803.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294777207|ref|ZP_06742663.1| aspartate--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319640898|ref|ZP_07995608.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|254834886|gb|EET15195.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|294448921|gb|EFG17465.1| aspartate--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317387480|gb|EFV68349.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 587

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 68/200 (34%), Gaps = 22/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R Y     F+E+++  L   +P      R F     +   
Sbjct: 131 LRRNCVRKNLELRHKMTMEVRRYLDSKGFLEVETPMLVGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +       S              +T A+A  +Y   D          
Sbjct: 246 IISTFEGMAKHLFKELRGVELS---------EPFLRMTWADAM-KYYGSDKPDLRFGMKF 295

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  D
Sbjct: 296 VE---LMDIMKGHGFSVFDD 312



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEVGRQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    +E+      + D   Q   FE           E         +   
Sbjct: 465 AAVRADAYDMVVNGVEVGGGSIRIHDSQLQAKMFEIL-----GFTPERAQEQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|240081179|ref|ZP_04725722.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240124092|ref|ZP_04737048.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|260439925|ref|ZP_05793741.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268597291|ref|ZP_06131458.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268682715|ref|ZP_06149577.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|291043203|ref|ZP_06568926.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268551079|gb|EEZ46098.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268622999|gb|EEZ55399.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|291012809|gb|EFE04792.1| aspartyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 602

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 66/197 (33%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  + + +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVATGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGGFPRMPYSEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTAAQNGDIIFFGADKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|300705177|ref|YP_003746780.1| aspartate tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299072841|emb|CBJ44197.1| aspartate tRNA synthetase [Ralstonia solanacearum CFBP2957]
          Length = 622

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 64/197 (32%), Gaps = 9/197 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y  +  FI+I++  L   +P     ++            
Sbjct: 148 RRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 202

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 203 -GQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 261

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +                          +   R   ++     D    
Sbjct: 262 IRDLFEEMIRTVFKNTMSVELDATFPVMEFREAMARFGSDKPDLRVK-LEFTDVTDVMKD 320

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A   G RV
Sbjct: 321 VDFKVFSNPANAEGGRV 337



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                    +    + E  E +            P  E              K +++   
Sbjct: 444 FEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGKCIAKAYDMVLN 503

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +     Q   F    +  K    E        L  L    P   GIA G 
Sbjct: 504 GWEIGGGSVRIFQEEVQSKVF----RALKIGEEEARAKFGFLLDALQYGAPPHGGIAFGL 559

Query: 327 DRLVMLVTGANNINEVIWTPFSQSNQE 353
           DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 560 DRIVTMMAGADSIRDVIAFPKTQRAQD 586


>gi|295136381|ref|YP_003587057.1| aspartyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294984396|gb|ADF54861.1| aspartyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 583

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 68/198 (34%), Gaps = 23/198 (11%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R Y     FIE+++  L   +P      R F     + +  
Sbjct: 133 RRNPVKNKLIFRHKVGMQVRNYLSNQGFIEVETPYLIKSTPEG---ARDFVVPSRMNE-- 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDI 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + R   +  N                   +T  EA  +Y N             
Sbjct: 248 LNIFEGLTRHLLKEINNITID----------AFPRMTYDEAMRKYGNDKPDIRFGM---- 293

Query: 193 DRHLLYLQAQQAGIRVAH 210
           +   L   A+  G  V  
Sbjct: 294 EFAELDDIAKNKGFNVFD 311



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 48/156 (30%), Gaps = 13/156 (8%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G+R   +     +    L+E  E     +        P  E                +
Sbjct: 412 ELGLRKPDEFAPLWVIDFPLLEWDEETERYHAMHHPFTSPKAEDIPLLATDPGKVRANAY 471

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMP 317
           +L     E+      + D   Q   F      E + K++            +       P
Sbjct: 472 DLVLNGNEIGGGSIRIHDKETQSKMFSHLGFTEEEAKEQFG--------FLMNAFQYGAP 523

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              GIA GFDRL  ++ G   I + I  P + + ++
Sbjct: 524 PHGGIAFGFDRLTAILGGQETIRDFIAFPKNNAGRD 559


>gi|288817673|ref|YP_003432020.1| aspartyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787072|dbj|BAI68819.1| aspartyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751271|gb|ADO44754.1| aspartyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 596

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +L R+     +RE F+++ F+EI++  L   +P      R F     +    
Sbjct: 135 RRESMKESILFRHKAYQIIREVFIKHGFVEIETPFLTKSTPEGA---RDFLVPSRLH--- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG ++ F      R+ +     QPEFT +++  +    E 
Sbjct: 189 PGKFYALPQSPQLFKQILMVAGFDRYFQIVKCLRDEDLRADRQPEFTQIDFEMSFVEEED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I                   +     E     +   R+  I+L    +    
Sbjct: 249 VISFSEELICKLFRELLGIELKRPFDRMSYKDVLERYGTDKPDRRF-GIELVDLSNIFKN 307

Query: 192 PDRHLLYLQAQQAG 205
            +  +     Q  G
Sbjct: 308 TEFKVFKDALQSGG 321



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 44/160 (27%), Gaps = 17/160 (10%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP------------ESA 247
            A++  +   +      +    L+E  E              P              +  
Sbjct: 412 IAKKYQLLRDNTFDLLWVVDFPLMEWDEEEGRFVSLHHPFTSPKEEDLPLLEEALKSQDL 471

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                       + ++L     E+      +     Q   F    +       E      
Sbjct: 472 EEKKQLLKRVRARAYDLVINGYEVGGGSIRIHRREVQELVF----KLLGISEVEAEEKFG 527

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L  L    P   G+A G DRL+ L+ G ++I +VI  P
Sbjct: 528 FLLRALRYGAPPHGGLAFGLDRLIALMRGLDSIRDVIAFP 567


>gi|325145003|gb|EGC67286.1| aspartyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 602

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 66/207 (31%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F++       +   +  AEA   Y   D      N   
Sbjct: 245 IMDITE----------GMAKQVFKDALNVDLGDFPRMPYAEAMF-YYGSDKPDMRINLKF 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L    +    R A D     + 
Sbjct: 294 TELTDLMKTEEFKVFRGAADMKGGRVV 320



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|149011973|ref|ZP_01833121.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147763928|gb|EDK70861.1| aspartyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 587

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 45/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P   +A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEGTAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSTEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEKEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|311109472|ref|YP_003982325.1| aspartyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310764161|gb|ADP19610.1| aspartyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 595

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 8/191 (4%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLL--YLQAQQAGIRVAHDDTWSDIFSRILI 223
           +     +    +   D    +++     R  +      ++ G+          +    + 
Sbjct: 383 KRTGAQDGDIIFFGADREKVVNDAIGALRVKIGHSEFGKKTGL-FEAGWQPLWVVDFPMF 441

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E +            P               F K +++     E+      +     
Sbjct: 442 EYDEEDGRYTAAHHPFTSPKDGHEDFLETDPSKAFAKAYDMVLNGWEIGGGSVRIHREEV 501

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q   F    +  K    E        L  L    P   GIA G DR+V ++TGA +I +V
Sbjct: 502 QSKVF----RALKIGAEEAREKFGYLLDALQYGAPPHGGIAFGLDRIVTMMTGAESIRDV 557

Query: 343 IWTPFSQSNQE 353
           I  P +Q  Q+
Sbjct: 558 IAFPKTQRAQD 568



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 68/197 (34%), Gaps = 9/197 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R  +    R++  +  FI+I++  L   +P     ++            
Sbjct: 130 RRPQMQRNLMLRYRVSIETRKFLDQLGFIDIETPMLAKSTPEGARDYLVPSRVNAGHFFA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 190 LPQ------SPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEFE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +   N+IR   +V      +                  +   R   ++     D    
Sbjct: 244 IREIFENLIRHVFKVVQGVDLASPFPIMPWTEAMRRYGSDKPDLRVK-LEFTDMTDVMRD 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A   G RV
Sbjct: 303 VDFKVFAAAATAPGSRV 319


>gi|32566633|ref|NP_506019.2| aspartyl(D) tRNA Synthetase family member (drs-2) [Caenorhabditis
           elegans]
 gi|24817292|emb|CAB04081.2| C. elegans protein F10C2.6, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 593

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 84/277 (30%), Gaps = 40/277 (14%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVEN-QFIEIDSMSL-Q 50
            +P     N     + R            L  R+    ++R + VE   F+++++ +L +
Sbjct: 128 MLPDANA-NERTRLKYRYIDLRSDKLQKSLRLRSEFVHNVRRFLVEKSGFVDVETPTLFR 186

Query: 51  YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
            +PG       F       +       L  SP+   + L+    ++ F  A  +R+    
Sbjct: 187 RTPGGAAE---FVVPAPSPN-QGLAYSLPQSPQQFKQLLMVGAIDRYFQIARCYRDEGSK 242

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT ++   +  +   +M+   ++I  A   +          +  P S    I  
Sbjct: 243 GDRQPEFTQVDVEMSFTTQNGVMQLIEDMIISAWPESL--------NHIKPKSPFPRIPY 294

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF------------ 218
           ++A   Y  ID           D      +  Q  I    D   S I             
Sbjct: 295 SDAMRLY-GIDKPDMRIPWQIDDVDNDIFEFLQKDID--DDTWRSRILVCRGAGKTTISN 351

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           S     K    +  N       +P+ +          
Sbjct: 352 SMKNEWKRLIQMNENGKNFAICHPSQKRWFKPFDNQK 388



 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 67/237 (28%), Gaps = 16/237 (6%)

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A ++                    +            F   +   + + F       
Sbjct: 341 CRGAGKTTISNSMKNEWKRLIQMNENGKNFAICHPSQKRWFKPFDNQKLIDQFGLIDEDV 400

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           L     N +     L     +      AH      +FS    + +  +         D  
Sbjct: 401 LIVCWGNSEGVYWTLEVCGLRSKSNVTAHWIVDFPLFSFEEGQLVSTHHPFTAPLEKD-- 458

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
                   +I        + ++L    +E+      + +   QRH         K +   
Sbjct: 459 -IDILYSNDIDKLLQITGQHYDLVINGVEMGGGSIRIENSEIQRHVL-------KVLGEP 510

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN----INEVIWTPFSQSNQE 353
           T  + E  L  L+   P   G A+G DR V ++T   N    + +VI  P +++ ++
Sbjct: 511 TDEM-EHLLNALSHGAPPHGGFALGLDRFVAMLTSDGNPLTPVRDVIAFPKTKNGKD 566


>gi|312222238|emb|CBY02178.1| similar to cytoplasmic asparaginyl-tRNA synthetase [Leptosphaeria
           maculans]
          Length = 575

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 92/314 (29%), Gaps = 49/314 (15%)

Query: 44  IDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           +   +L      G  T        L    +  +  YL  S +   +  L +    ++C  
Sbjct: 294 VSPPALVQTQVEGGAT--------LFKFGYYNEEAYLTQSSQLYLETCLPS-MGDVYCIE 344

Query: 102 HAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
            ++R  +     H  E+T +E    + +++ L+     ++                    
Sbjct: 345 KSFRAEKSLTRRHLAEYTHIEAELDYINFDDLLTHLEEVM-------------------- 384

Query: 161 PFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV------AHDDTW 214
                  +T+++   +   +DL      P++P + + Y  A    +             +
Sbjct: 385 --CRVLEVTMSDPVIKQHIMDLNPEFRMPERPFKRMKYQDAIDWLVEHNIPNEDGEPHKF 442

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCN 273
            D  +     ++     IN    L  +P    +        D R T+  +     +    
Sbjct: 443 GDDIAEAAERRM--TDIINRPIFLTHFPTAIKAFYMLKDKDDARVTESVDCLMPGVGEIV 500

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLV 333
                +D  ++          +++I    Y    D            G  +G +R +  +
Sbjct: 501 GGSMRMDNYDEL----MAAFAREQIDPAAYYWYTD--QRKYGSSPHGGYGLGLERFLAWL 554

Query: 334 TGANNINEVIWTPF 347
              + + +    P 
Sbjct: 555 CKQHTVRDCCLYPR 568


>gi|154490243|ref|ZP_02030504.1| hypothetical protein PARMER_00475 [Parabacteroides merdae ATCC
           43184]
 gi|154089135|gb|EDN88179.1| hypothetical protein PARMER_00475 [Parabacteroides merdae ATCC
           43184]
          Length = 613

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 70/200 (35%), Gaps = 22/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R Y  +  F+E+++  L   +P      R F     +   
Sbjct: 159 LRRNAVRKNLELRHRMAFEVRNYLDKQGFLEVETPVLVNSTPEG---ARDFVVPSRMN-- 213

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 214 PGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQED 273

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +V             +       I+  +A  +Y   D      +   
Sbjct: 274 VLNIFEGMAKHLFKVIRG---------IDIKEAFPRISWHDAM-KYYGSDKPDLRFDMKF 323

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  +
Sbjct: 324 VE---LMDIMKGHGFSVFDN 340



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A Q G+R  +      +    L E  E +            P PE         
Sbjct: 433 ELRLEVAGQLGLRDKNKFACLWVIDFPLFEWSEEDQRFYAMHHPFTSPKPEDIPLLDSDT 492

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++    +E+      + D   Q   F    Q       +        +    
Sbjct: 493 GAVRANAYDMVINGVEVGGGSIRIHDSKLQDKMF----QLLGFTEEKAQERFGFLMNAFK 548

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DR V L  G ++I + I  P
Sbjct: 549 YGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 581


>gi|85859320|ref|YP_461522.1| aspartyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|97196498|sp|Q2LTE0|SYD2_SYNAS RecName: Full=Aspartyl-tRNA synthetase 2; AltName:
           Full=Aspartate--tRNA ligase 2; Short=AspRS 2
 gi|85722411|gb|ABC77354.1| aspartyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 591

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 51/151 (33%), Gaps = 11/151 (7%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +       +  I    L+E  +              P P+              
Sbjct: 419 LAKKLNLIDPEQFAFVWITEFPLMEFSDTEKRYVSTHHPFTSPVPDDVKYLPGEPGKVRA 478

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-E 315
           + ++L     E+      +        R E +    + +  E   +   F   L  L   
Sbjct: 479 RAYDLVLNGSEVGGGSIRIH-------RKEIQSLIFEALGLENEEVRSKFGFLLDALEFG 531

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   GIA G DRLVM++TGA +I +VI  P
Sbjct: 532 TPPHGGIAFGLDRLVMMMTGAESIRDVIAFP 562



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 70/178 (39%), Gaps = 19/178 (10%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKP 75
           +R  +L RN + +  R++F  N FIEI++  L   +P     ++            + + 
Sbjct: 146 QRNIML-RNRVAAETRQFFQSNGFIEIETPFLTKSTPEGARDYLVPSRINKGTFYALPQ- 203

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
                SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +  + + +++ 
Sbjct: 204 -----SPQIFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDVEMSFITEDDIIEI 258

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
              ++              + +N    +    ++ AEA  RY   D        +  D
Sbjct: 259 MEGLM---------THLFSRCLNRTFSTPFPRLSYAEAIGRY-GKDNPDIRFGLELRD 306


>gi|331086130|ref|ZP_08335212.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330406289|gb|EGG85803.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 596

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 64/191 (33%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+   +  R++  E  F+EI++  L   +P     ++            
Sbjct: 141 RRPDLQRNLMMRSKAATLTRQFLAEEGFLEIETPMLIKSTPEGARDYLVPSRVHPGNFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIFKQLLMCSGYDRYFQIVKCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +       S              +T  EA  R+   D        + 
Sbjct: 255 VIDVNERLLAKLFKEILGVEVS---------LPIPRMTWQEAMDRF-GSDKPDIRFGMEL 304

Query: 192 PDRHLLYLQAQ 202
            D   +    +
Sbjct: 305 VDVSEVVKDCE 315



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  I    D  +  +    L+E  E              P  E         
Sbjct: 415 NLRLEIARQLEILDKGDYRFLWVTEFPLLEWNEEAGRYTAMHHPFTMPMEEDLDLLDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     EL      + +   Q   FE     +++   E +      L+   
Sbjct: 475 GKVRAKAYDIVLNGTELGGGSVRIFNQEIQNKMFEVLGFTREQA-EEQFG---FLLSAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRL+ML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLIMLMAKEDSIRDVIAFPKVK 566


>gi|323524741|ref|YP_004226894.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323381743|gb|ADX53834.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 599

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  E +            P  E              K +
Sbjct: 424 KANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLESDPARCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y     FI+I++  L   +P     ++    T       
Sbjct: 133 RRPQMQHNLRLRYRVAIEVRKYLDTLGFIDIETPMLTKSTPEGARDYLVPSRTNP----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLSEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +         +                +   R   ++     D    
Sbjct: 247 IRDLFEAMIRHVFKETIGVELDAKFPVMEYSEAMRRFGSDKPDLRVK-LEFTDLTDAVKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSAPANTKDGRVA 323


>gi|254823291|ref|ZP_05228292.1| aspartyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 591

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 75/212 (35%), Gaps = 33/212 (15%)

Query: 3   QIP---SQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P    +P    +   + R            +  R+ + ++ R    ++ F+EI++ ++
Sbjct: 106 PLPFQLDEPAG-EELRLKYRYLDLRRDGPAEAIRLRSKVNAAARAVLAQHDFVEIETPTI 164

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              +P      R F     +        Y L  SP+   + L+ AG E+ +  A  +R+ 
Sbjct: 165 TRSTPEG---ARDFLVPARLH---PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDE 218

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT L+   +    E ++     I+     +   +I +              
Sbjct: 219 DFRADRQPEFTQLDMEMSFVDAEDILAISEEILSALWALIGYQIPT----------PIPR 268

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I+ AEA  R+   D        +  D    + 
Sbjct: 269 ISYAEAMRRF-GSDKPDMRFGLELVDCTEFFK 299



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 17/102 (16%)

Query: 253 PADPRF--TKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYP 304
             DP       +++     E+      +     Q   F        E +EK     E + 
Sbjct: 463 DTDPGNVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDHAEAEEKFGFLLEAFT 522

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                       P   GIA G+DR+  L++G ++I EVI  P
Sbjct: 523 F---------GAPPHGGIAFGWDRINALLSGVDSIREVIAFP 555


>gi|90580113|ref|ZP_01235921.1| aspartyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438998|gb|EAS64181.1| aspartyl-tRNA synthetase [Vibrio angustum S14]
          Length = 596

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNAFLDIETPVLTKATPEGARDYLVPSRVHKGNFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +                      ++  EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMITEMWKELLNVDLGT----------FPIMSFEEADRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +             +D    +
Sbjct: 293 VDVADIVKDVDFKVFSGPANDEKGRV 318



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 19/145 (13%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT--KRFELYACN 268
           D +       +     E N   +   +   + +P +       A+P       +++    
Sbjct: 421 DKSAWKPLWVVDFPMFEENEDGSLSAMHHPFTSPLNLTPEELAANPAAALSNAYDMVING 480

Query: 269 IELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
            E+      + +   Q   F+       E + K              L  L    P  +G
Sbjct: 481 YEVGGGSVRIHNSDMQSTVFDILGISADEQRLKFG----------FLLDALKFGTPPHAG 530

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           +A G DRLVML+ G +NI +VI  P
Sbjct: 531 LAFGLDRLVMLLCGTDNIRDVIAFP 555


>gi|71275957|ref|ZP_00652239.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Dixon]
 gi|71901399|ref|ZP_00683491.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Ann-1]
 gi|71163190|gb|EAO12910.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Dixon]
 gi|71728832|gb|EAO30971.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Ann-1]
          Length = 589

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 68/211 (32%), Gaps = 30/211 (14%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   D   +      RRP +      R  +  +LR +   + F +I++  L 
Sbjct: 110 PLPFHAHENPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A  S   +      +IR   +                      +
Sbjct: 224 LRADRQLEFTQLDMEFAFVSERDVQDFVEEMIRRVFKEVAGIELDTT---------FPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           T  EA  R+   D      N +  D   L  
Sbjct: 275 TWKEAMRRF-GSDKPDLRINLELIDVAALVA 304



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 6/153 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-IYPA 254
            L L+A +    +  D     +    + E  E              PA    +      A
Sbjct: 408 ALRLKAGKDFALITADWRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAIDDIDELRAHA 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               ++ +++     E+      +  P  QR  FE          +E        L  L 
Sbjct: 468 RTALSRGYDMVLNGNEIGGGSIRIHRPEMQRAVFE----LLGITEDEARVKFGFLLDALN 523

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 524 YGAPPHGGIAFGIDRIAALIAGTESIRDVIPFP 556


>gi|116492877|ref|YP_804612.1| aspartyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265659|sp|Q03F52|SYD_PEDPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116103027|gb|ABJ68170.1| aspartyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 593

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 66/183 (36%), Gaps = 21/183 (11%)

Query: 16  YRRRPFLL---KRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR   L     RN I  ++  Y  E  F++I++  L   +P     ++           
Sbjct: 133 LRRPEMLKGLKIRNRITQAVHSYLDEQGFLDIETPDLTKSTPEGARDYLVPSRVYPGHFY 192

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  + E
Sbjct: 193 ALPQ------SPQLFKQLLMGAGIDRYYQLARCFRDEDLRGDRQPEFTQIDLETSFLTAE 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++      +I                ++ +     + I+  E+  R+   D        +
Sbjct: 247 EIQDITEGLIA---------RVMKDTLDIDVKLPFDRISWKESMDRF-GTDQPDVRFGME 296

Query: 191 QPD 193
             D
Sbjct: 297 LKD 299



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 11/136 (8%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR------FTKRFELYACNIEL 271
           F  ++   +      +   +   +P       +++  D          + +++    +EL
Sbjct: 427 FLWVVDWPLFDYDEGDQRWVAAHHPFTMPNEEDVHYLDEGEDPHQAHAQSYDIILNGLEL 486

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLV 330
                 +     Q    +      +   ++   +    L  L    P   G+A+G DR  
Sbjct: 487 GGGSIRINTRELQEKMLKALGFSLESANDQFGYL----LTALDYGFPPHGGLAIGLDRFA 542

Query: 331 MLVTGANNINEVIWTP 346
            L+   +NI +VI  P
Sbjct: 543 RLLVKRDNIRDVIAFP 558


>gi|71901605|ref|ZP_00683685.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Ann-1]
 gi|71728615|gb|EAO30766.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Xylella
           fastidiosa Ann-1]
          Length = 589

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 68/211 (32%), Gaps = 30/211 (14%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   D   +      RRP +      R  +  +LR +   + F +I++  L 
Sbjct: 110 PLPFHAHENPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEG---ARDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A  S   +      +IR   +                      +
Sbjct: 224 LRADRQLEFTQLDMEFAFVSERDVQDFVEEMIRRVFKEVAGIELDTT---------FPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           T  EA  R+   D      N +  D   L  
Sbjct: 275 TWEEAMRRF-GSDKPDMRINLELIDVAALVA 304



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 52/157 (33%), Gaps = 14/157 (8%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-IYPA 254
            L L+A +    +  D     +    + E  E              PA  + +      A
Sbjct: 408 ALRLKAGKDFALITADWRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAINDIDELRAHA 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
               ++ +++     E+      +  P  QR  FE     E + + K            L
Sbjct: 468 RTALSRGYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFG--------FLL 519

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 520 DALNYGAPPHGGIAFGIDRIAALIAGTESIRDVIPFP 556


>gi|193214425|ref|YP_001995624.1| aspartyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087902|gb|ACF13177.1| aspartyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 604

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 65/192 (33%), Gaps = 9/192 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                R  +L R+ + S +R + ++  F EI +  L   SP     ++            
Sbjct: 147 RREHLRENILFRSKVTSEIRRFLIDGGFHEIQTPILTVSSPEGARDYLVPSRLHPGKFYA 206

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ AG +K F  A  +R+ +      P EF  L+   +  + +
Sbjct: 207 LPQ------APQQFKQLLMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDMEMSFITQD 260

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            L     N+ +   +   QK          PF E       +       +++    D   
Sbjct: 261 DLFVILENLFQHLTKTFTQKSIRQFPFPRIPFRESMDKYGTDKPDVRVPLEIQDLSDFFV 320

Query: 191 QPDRHLLYLQAQ 202
             D  +     +
Sbjct: 321 DSDFKVFSSNCK 332



 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 43/141 (30%), Gaps = 5/141 (3%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           +  I    + E  E    I+        P                  ++++    IEL +
Sbjct: 440 FCWIVDFPMYEYNEDEKKIDFSHNPFSMPQGGMDALTQKDPLDILAYQYDIVCNGIELSS 499

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
                  P      FE           E        L       P   GIA G DRLVM+
Sbjct: 500 GAIRNHKPEIMYKAFE----IAGYGKEEVERSFGHMLNAFKHGAPPHGGIAPGVDRLVMI 555

Query: 333 VTGANNINEVIWTPFSQSNQE 353
           +    NI EVI  P +Q  Q+
Sbjct: 556 LRDEQNIREVIAFPMNQKAQD 576


>gi|207727909|ref|YP_002256303.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein
           [Ralstonia solanacearum MolK2]
 gi|206591151|emb|CAQ56763.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein
           [Ralstonia solanacearum MolK2]
          Length = 607

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 64/197 (32%), Gaps = 9/197 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y  +  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +                          +   R   ++     D    
Sbjct: 247 IRDLFEEMIRTVFKNTMSVELDATFPVMEFREAMARFGSDKPDLRVK-LEFTDVTDVMKD 305

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A   G RV
Sbjct: 306 VDFKVFSNPANAEGGRV 322



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                    +    + E  E +            P  E              K +++   
Sbjct: 429 FEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGKCIAKAYDMVLN 488

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +     Q   F    +  K    E        L  L    P   GIA G 
Sbjct: 489 GWEIGGGSVRIFQEEVQSKVF----RALKIGEEEARAKFGFLLDALQYGAPPHGGIAFGL 544

Query: 327 DRLVMLVTGANNINEVIWTPFSQSNQE 353
           DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 545 DRIVTMMAGADSIRDVIAFPKTQRAQD 571


>gi|94263256|ref|ZP_01287072.1| tRNA synthetase, class II (D, K and N):nucleic acid binding,
           OB-fold, tRNA/helicase-type [delta proteobacterium
           MLMS-1]
 gi|93456339|gb|EAT06463.1| tRNA synthetase, class II (D, K and N):nucleic acid binding,
           OB-fold, tRNA/helicase-type [delta proteobacterium
           MLMS-1]
          Length = 345

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 65/167 (38%), Gaps = 21/167 (12%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     L+ R+    ++R +  +  F+EI++  L   +P     ++            
Sbjct: 140 RRPTMAANLVLRHQASQAIRNFLNDEDFLEIETPVLTRSTPEGARDYLVPSRVNPGRFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ +     +R+ +     QPEFT +++  +    E 
Sbjct: 200 LPQ------SPQLFKQLLMVAGMERYYQIVRCFRDEDLRADRQPEFTQVDFELSFVDEEG 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           +M     +++   +    +                 +T AEA AR+ 
Sbjct: 254 VMAVAEGMMKNLFKATLGREL---------APPFPRMTYAEALARFG 291


>gi|307728452|ref|YP_003905676.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307582987|gb|ADN56385.1| aspartyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 599

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  E +            P  E              K +
Sbjct: 424 KANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLESDPARCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 68/184 (36%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y     FI+I++  L   +P     ++    T       
Sbjct: 133 RRPQMQHNLRLRYRVAIEVRKYLDTLGFIDIETPMLTKSTPEGARDYLVPSRTNP----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLSEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +IR   +                 ++   +  +EA  R+ +   DL   L+  
Sbjct: 247 IRDLFEAMIRHVFKETIGVELD---------AKFPVMEYSEAMRRFGSDKPDLRVKLEFT 297

Query: 190 DQPD 193
           D  D
Sbjct: 298 DLTD 301


>gi|325662327|ref|ZP_08150936.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471329|gb|EGC74552.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 596

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 64/191 (33%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+   +  R++  E  F+EI++  L   +P     ++            
Sbjct: 141 RRPDLQRNLMMRSKAATLTRQFLAEEGFLEIETPMLIKSTPEGARDYLVPSRVHPGNFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIFKQLLMCSGYDRYFQIVKCFRDEDLRADRQPEFTQIDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +       S              +T  EA  R+   D        + 
Sbjct: 255 VIDVNERLLAKLFKEILGVEVS---------LPIPRMTWQEAMDRF-GSDKPDIRFGMEL 304

Query: 192 PDRHLLYLQAQ 202
            D   +    +
Sbjct: 305 VDVSEVVKDCE 315



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  I    D  +  +    L+E  E              P  E         
Sbjct: 415 NLRLEIARQLEILDKGDYRFLWVTEFPLLEWNEEAGRYTAMHHPFTMPMEEDLDLLDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     EL      + +   Q   FE     +++   E +      L+   
Sbjct: 475 GKVRAKAYDIVLNGTELGGGSVRIFNQEIQNKMFEVLGFTREQA-EEQFG---FLLSAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRL+ML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLIMLMAKEDSIRDVIAFPKVK 566


>gi|300692527|ref|YP_003753522.1| aspartate tRNA synthetase [Ralstonia solanacearum PSI07]
 gi|299079587|emb|CBJ52265.1| aspartate tRNA synthetase [Ralstonia solanacearum PSI07]
          Length = 622

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                    +    + E  E +            P  E              K +++   
Sbjct: 444 FEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGKCIAKAYDMVLN 503

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +     Q   F    +  K    E        L  L    P   GIA G 
Sbjct: 504 GWEIGGGSVRIFQEEVQSKVF----RALKIGEEEARAKFGFLLDALQYGAPPHGGIAFGL 559

Query: 327 DRLVMLVTGANNINEVIWTPFSQSNQE 353
           DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 560 DRIVTMMAGADSIRDVIAFPKTQRAQD 586



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 52/133 (39%), Gaps = 8/133 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y     FI+I++  L   +P     ++    T       
Sbjct: 148 RRPQMQYNLRLRYKVAMEVRKYLDAQGFIDIETPMLTKSTPEGARDYLVPSRTNA----- 202

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 203 -GQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 261

Query: 132 LMKDCMNIIRCAA 144
           +      +IR   
Sbjct: 262 IRDLFEEMIRTVF 274


>gi|297623999|ref|YP_003705433.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165179|gb|ADI14890.1| aspartyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 610

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 73/197 (37%), Gaps = 21/197 (10%)

Query: 16  YRRRPFLL---KRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR   L     R+ +  ++ ++     F+++++  L   +P      +    T+     
Sbjct: 143 LRRPEALRPLLVRHKVIKAIWDFLDAEGFVQVETPLLTLSTPEGARDFVVPSRTQPGSFY 202

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG E+ F  A  +R+ +     QP+FT L+   +  + +
Sbjct: 203 ALPQ------SPQLFKQLLMMAGVERYFQIARCFRDEDLRADRQPDFTQLDLEMSFVTQD 256

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +L+     ++R  A+ A     +              +T  +A  R+   D        +
Sbjct: 257 ELLDLNERLMRAVAKAALGIDLT---------LPFTRLTYEDAMNRF-GSDKPDVRFALE 306

Query: 191 QPDRHLLYLQAQQAGIR 207
             D    + +    G R
Sbjct: 307 LQDLSETFAETDFRGFR 323



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 49/150 (32%), Gaps = 13/150 (8%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            + G+       +  +    L+E+ +   G          P  E                
Sbjct: 425 HELGLIPGGTYRFLWVVDFPLLERDDETGGYTYMHHPFTRPREEDLPLLETDPGRVRAWA 484

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEM 316
           ++L     E+      + D   Q   F      E + +++           F+  L    
Sbjct: 485 YDLVLNGFEVGGGSLRIYDQATQLKMFAALGISEREARERFG--------FFVDALAYGA 536

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DRLVML  GA ++ +VI  P
Sbjct: 537 PPHGGVAWGLDRLVMLFAGAQSLRDVIAFP 566


>gi|24584738|ref|NP_724018.1| CG31739 [Drosophila melanogaster]
 gi|21430724|gb|AAM51040.1| SD02215p [Drosophila melanogaster]
 gi|22946677|gb|AAF53577.3| CG31739 [Drosophila melanogaster]
          Length = 1082

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 74/201 (36%), Gaps = 20/201 (9%)

Query: 13  DFHY-RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQ 69
           D  +   +  L  R+ +   +REY +    F+E+++ +L + +PG       F       
Sbjct: 532 DLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQE---FVVPTRKA 588

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
            H      L  SP+   + L++ G ++ F  A  +R+       QPEFT L+   +  S 
Sbjct: 589 GHF---YSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSR 645

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + +M+     +R           S+        +    IT  EA  +Y   D   T    
Sbjct: 646 DDIMQLIEETLRY----------SWPKDFPRLQTPFRRITYEEAMEKY-GNDKPDTRFGF 694

Query: 190 DQPDRHLLYLQAQQAGIRVAH 210
              +   +  ++ +   +   
Sbjct: 695 LLNNVSEIIEKSDEFKEKYDD 715



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 61/210 (29%), Gaps = 38/210 (18%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
               V E   +    D+ T +   D+ D     L     G +V   +    I        
Sbjct: 756 PTKDVQEKLGKLLGEDVATEV--ADKFDLEENDLLFLGIGSKVETRELLGRIRLDYQDFL 813

Query: 226 IE----PNLGINCCTILDRYPAPES------------ALANIYPADPRF----------- 258
           +E              +  +P  E                  +  D              
Sbjct: 814 VENAKIKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLENFATSCENLESI 873

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
            ++ ++L     E+      + D   Q    E+ ++         +      L+ L    
Sbjct: 874 RSQAYDLVLNGQEVGGGSIRIHDRDMQHFILEQILKI-------PHDHLSHLLSALESGC 926

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   GIA+G DRL+ ++  A +I +VI  P
Sbjct: 927 PPHGGIALGLDRLIAILCRARSIRDVIAFP 956


>gi|225076015|ref|ZP_03719214.1| hypothetical protein NEIFLAOT_01042 [Neisseria flavescens
           NRL30031/H210]
 gi|224952730|gb|EEG33939.1| hypothetical protein NEIFLAOT_01042 [Neisseria flavescens
           NRL30031/H210]
          Length = 602

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      ++      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGDFPRMPYSEAMFYYGS--DKPDMRIDLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 48/171 (28%), Gaps = 5/171 (2%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +   D    ++      R  + L+          +     +    + E  E         
Sbjct: 398 FFGADKAKVVNEAIGALRIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEADRYVAVH 457

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P        +        + +++     E+      +     Q   F       K
Sbjct: 458 HPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKVF----AALK 513

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L  L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 514 ISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|94309323|ref|YP_582533.1| aspartyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|123081434|sp|Q1LRG2|SYD_RALME RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|93353175|gb|ABF07264.1| aspartyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 602

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                    +    + E  E +            P  E              K +++   
Sbjct: 430 FEDTWKPLWVIDFPMFEYDEEDARWVAMHHPFTSPKDEHLQYLETDPGKCIAKAYDMVLN 489

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +     Q   F    +  K    E        L  L    P   G+A G 
Sbjct: 490 GWEMGGGSVRIYREDVQSKVF----RALKINDEEARAKFGYLLDALQYGAPPHGGLAFGL 545

Query: 327 DRLVMLVTGANNINEVIWTPFSQSNQE 353
           DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 546 DRIVTMMAGADSIRDVIAFPKTQRAQD 572



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 76/205 (37%), Gaps = 21/205 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y     FI+I++  L + +P     ++            
Sbjct: 134 RRPQMQYNLRLRYKVAMEVRKYLDAQGFIDIETPMLGKSTPEGARDYLVPSRVNPGHFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 194 LPQ------SPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLTEQE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++R   + A         ++ +  ++   +   EA AR+         D   +
Sbjct: 248 IRDLFEDMMRTVFKNA---------IDVDLDAKFPVMEFREAMARFG----SDKPDLRVK 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSD 216
            +   L    +    +V      SD
Sbjct: 295 LEFTELTEVMKDVDFKVFSGPANSD 319


>gi|319940836|ref|ZP_08015175.1| aspartyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319805718|gb|EFW02499.1| aspartyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 601

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 76/202 (37%), Gaps = 19/202 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R     + R++   N FI++++ +L   +P     ++     +      
Sbjct: 131 RRPVMQKNLRTRYRTAMAFRKFLDANGFIDVETPALTRSTPEGARDYLVPSRVQEGCFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQIVKCFRDEDLRADRQPEFTQVDIETSFLNMDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +IR   +            + +  +    +   +A A+Y +   DL  +L   
Sbjct: 245 IRGLMEELIRTVFKEVL---------DVDFVNPFPVMLWDDAMAKYGSDKPDLRISLRLH 295

Query: 190 DQPDRHLLYLQAQQAGIRVAHD 211
           +  D          +G++  H+
Sbjct: 296 EVTDIVENSAFKVFSGVKSLHN 317



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 41/140 (29%), Gaps = 5/140 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                    + +  + E  E +     C      P        +   +  + K ++    
Sbjct: 427 FTPGWKPLWVINFPMFEYSEEDQRWVACHHPFTCPLDGDEDKLLTDPEHCYAKAYDCVLN 486

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGF 326
             E+      +     Q   F       K    E        L  L    P   G+A G 
Sbjct: 487 GWEIGGGSIRIHREDVQEKVF----AALKIGPEEARQKFGFLLDALKFGAPPHGGLAFGL 542

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DR+V ++  A +I +VI  P
Sbjct: 543 DRIVAMMVDAPSIRDVIAFP 562


>gi|254670608|emb|CBA06571.1| Aspartyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 602

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      N+      D    
Sbjct: 245 IMDITEGMAKQVFKDALNVDLGGFPRMPYAEAMFYYGS--DKPDMRINLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 5/182 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
             F       K    E        L  L    P   G+A G DRLV L+TGA +I +VI 
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIA 562

Query: 345 TP 346
            P
Sbjct: 563 FP 564


>gi|161523754|ref|YP_001578766.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189351485|ref|YP_001947113.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|238687025|sp|A9AFC7|SYD_BURM1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160341183|gb|ABX14269.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189335507|dbj|BAG44577.1| aspartyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 600

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  + +            P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLESDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREDVQSKVF----RALKIGAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 70/184 (38%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +     ++IR   +           +N    ++   +  +EA AR+ +   DL   L+  
Sbjct: 247 IRDLFEDMIRHIFKTT---------INVELDAKFPVMPYSEAMARFGSDKPDLRVKLEFT 297

Query: 190 DQPD 193
           +  D
Sbjct: 298 ELTD 301


>gi|260578813|ref|ZP_05846720.1| aspartate--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603111|gb|EEW16381.1| aspartate--tRNA ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 600

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 21/189 (11%)

Query: 16  YRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR+     L  R+ +  + R    E+ F EI++ +L   +P      R F     ++  
Sbjct: 133 LRRKTQGDALRLRSRVNQAARGVLAEHDFTEIETPTLTRSTPEG---ARDFLVPARLR-- 187

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    E
Sbjct: 188 -PGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQE 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     I+    +    +I +              +T A+A   Y +       D   
Sbjct: 247 DVISLAEEILVAIWKEIGYEIST----------PIPRMTYADAMKYYGSDKPDLRFDIQI 296

Query: 191 QPDRHLLYL 199
                    
Sbjct: 297 TECTDFFKN 305



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 69/258 (26%), Gaps = 34/258 (13%)

Query: 114 QPEFTMLEWYRAHESYE------QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           Q E+                             +  A +   +            ++ E 
Sbjct: 312 QNEYVGAVVMEGGADQPRRQLDAWQEWAKQRGAKGLAYILVGEDGELSGPVAKNITDEER 371

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLY----LQAQQAGIRVAHDDTWSDIFSRILI 223
             +AE        D         +P R LL       A + G+    D  ++ +    L 
Sbjct: 372 AGIAEHVGAKPG-DCIFFAAGETKPSRALLGAARGEIANKLGLIKEGDWAFTWVVDAPLF 430

Query: 224 EKIEP----------NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           E              +            P PE                +++     E+  
Sbjct: 431 EPAADATASGDVALGHSAWTAVHHAFTSPKPEYLDNFDENPGEALAYAYDIVCNGNEIGG 490

Query: 274 ACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDR 328
               +  P  Q   F+     E + ++K            L       P   GIA G+DR
Sbjct: 491 GSIRIHQPDVQERVFKVMGITEEEAREKFG--------FLLDAFAFGAPPHGGIAFGWDR 542

Query: 329 LVMLVTGANNINEVIWTP 346
           +V L+ G ++I +VI  P
Sbjct: 543 IVSLLGGFDSIRDVIAFP 560


>gi|28198847|ref|NP_779161.1| aspartyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182681544|ref|YP_001829704.1| aspartyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130090|sp|Q87CW0|SYD_XYLFT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238691039|sp|B2I4Y5|SYD_XYLF2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|28056938|gb|AAO28810.1| aspartyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182631654|gb|ACB92430.1| aspartyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|307579971|gb|ADN63940.1| aspartyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 589

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 68/211 (32%), Gaps = 30/211 (14%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   D   +      RRP +      R  +  +LR +   + F +I++  L 
Sbjct: 110 PLPFHAHENPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEG---ARDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A  S   +      +IR   +                      +
Sbjct: 224 LRADRQLEFTQLDMEFAFVSERDVQDFVEEMIRRVFKEVAGIELDTT---------FPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           T  EA  R+   D      N +  D   L  
Sbjct: 275 TWKEAMRRF-GSDKPDMRINLELIDVAALVA 304



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 52/157 (33%), Gaps = 14/157 (8%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-IYPA 254
            L L+A +    +  D     +    + E  E              PA  + +      A
Sbjct: 408 ALRLKAGKDFALITADWRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAINDIDELRTHA 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
               ++ +++     E+      +  P  QR  FE     E + + K            L
Sbjct: 468 RTALSRGYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFG--------FLL 519

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 520 DALNYGAPPHGGIAFGIDRIAALIAGTESIRDVIPFP 556


>gi|213966108|ref|ZP_03394295.1| aspartyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213951206|gb|EEB62601.1| aspartyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 609

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 13  DFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            +  R  +  + R+    + F EI++ +L   +P      R 
Sbjct: 123 EARLKYRYLDLRREGPAKIMRLRAAVNRAARKVLDSHDFTEIETPTLTRSTPEG---ARD 179

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     ++       Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L
Sbjct: 180 FVVPARLK---PGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQL 236

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + ++     I+      A   + +              +T  EA  +Y + 
Sbjct: 237 DVEMSFAEQDDVIALAEEILVAIFAEAGVTVQT----------PIPRMTFKEAMEKYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLYL 199
                 D P          
Sbjct: 287 KPDLRFDIPLVECTEFFKD 305



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 48/159 (30%), Gaps = 15/159 (9%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEP----------NLGINCCTILDRYPAPESAL 248
             A++ G+    D  ++ +    L E              +            P PE   
Sbjct: 406 EIAKKLGLIKEGDWAFTWVVDAPLFEPAADATASGDVALGHSQWTAVHHAFTSPKPEHMD 465

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                        +++     E+      +  P  Q+  F+           E       
Sbjct: 466 TFDKDPGNALAYAYDIVCNGNEIGGGSIRIHRPDVQKRVFDVMGI----GEEEAQEQFGF 521

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L       P   GIA G+DR+V L+ G ++I EVI  P
Sbjct: 522 LLDAFQYGAPPHGGIAFGWDRIVSLLAGVDSIREVIAFP 560


>gi|330718277|ref|ZP_08312877.1| aspartyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 592

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 47/144 (32%), Gaps = 7/144 (4%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR--FTKRFE 263
           +   +   ++ I    L E  E              P  E         DP     + ++
Sbjct: 419 VDNTNPWAFAWIVDWPLFEYSEDFDRWISAHHPFTMPNEEDLHYLDEGEDPHKAHAQSYD 478

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGI 322
           L     EL +    +     Q    +     K+K     +      L  +    P   GI
Sbjct: 479 LVLNGFELGSGSIRIHRMDIQEKMLKALGFSKEK----AHEAFGFLLEAMEYGFPPMGGI 534

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A+G DRL ML+ G  NI EVI  P
Sbjct: 535 ALGLDRLAMLLAGQENIREVIAFP 558



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 67/195 (34%), Gaps = 8/195 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ I SS   +   + FI I++  L   +P     ++            
Sbjct: 133 RRPEMQKNLRIRSKIMSSAMHFMTTHDFINIETPILAKSTPEGARDYLVPSRIFPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A A+R+ +     QPEFT ++   +  S ++
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQPEFTQMDVETSFMSADE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +       ++   +         Q++    + E       +        ++        Q
Sbjct: 247 IRHLVNEWVKVMMKEVVDFDLDTQSIPTLTWQESMDRFGTDKPDLRIAYEIQDLSATVAQ 306

Query: 192 PDRHLLYLQAQQAGI 206
            +  +     +  G+
Sbjct: 307 SEFGVFANAVKDGGV 321


>gi|302921352|ref|XP_003053268.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734208|gb|EEU47555.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 563

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/346 (14%), Positives = 112/346 (32%), Gaps = 41/346 (11%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFST 64
           +       H +    +  R++I+S+    + E    ++   +L      G  T       
Sbjct: 247 RHLTL--RHEKPAAIMFVRDVIESAFHTAYKELDVKKVSPPALVQTQVEGGAT------- 297

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
            L   D+  +  YL  S +   + +L      ++C   ++R  +     H  E+T +E  
Sbjct: 298 -LFKFDYYGETSYLTQSSQLYLETVLP-VLGDVYCIEKSFRAEKSLTRRHLSEYTHVEAE 355

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
               +++ L+    ++I    ++A +   + + +      E +         RY++    
Sbjct: 356 LDFITFDDLLAHLEHVICRVIDLALENPIAAEAIKKYN-PEFKKPERPFMRMRYSD---- 410

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                       + +L+ +       +D T+ D  +     K+     IN    L  +P 
Sbjct: 411 -----------AIDWLRERGIKNEEGNDHTFGDDIAEAAERKM--TDEINRPIFLTHFPV 457

Query: 244 PESALANIY-PADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
              +        DPR T+  +     + E+      + D  E    ++     ++ I   
Sbjct: 458 EIKSFYMQKAEDDPRVTESVDCLMPGVGEIVGGSMRIWDWEELMAGYK-----REGIDPS 512

Query: 302 TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            Y    D            G  +G +R +  +     + E    P 
Sbjct: 513 GYFWYTD--QRKYGSTPHGGYGLGAERFLAWLLKLWTVREACLYPR 556


>gi|221200073|ref|ZP_03573116.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221206774|ref|ZP_03579786.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221211255|ref|ZP_03584234.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221168616|gb|EEE01084.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221173429|gb|EEE05864.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221180312|gb|EEE12716.1| aspartyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 600

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  + +            P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLESDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREDVQSKVF----RALKIGAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 64/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +         +                +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHIFKTTIDVELDAKFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANAKDGRVA 323


>gi|193212990|ref|YP_001998943.1| aspartyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|238692646|sp|B3QP90|SYD_CHLP8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|193086467|gb|ACF11743.1| aspartyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 603

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + +++R+Y  +  FIEI +  L   SP      R F     +    
Sbjct: 146 RRERLHENIIFRSQLTAAVRKYLTDLDFIEIQTPILTSSSPEG---ARDFLVPSRLH--P 200

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G  + F  A  +R+ +      P EF  ++   +    + 
Sbjct: 201 GKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQVDIEMSFVEQDD 260

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L      + +   E    K  +              I+  +   RY   D        + 
Sbjct: 261 LFVILEGMFKHLVETMTTKRIAQ--------YPFPRISYKDVMNRY-GSDKPDLRIPIEI 311

Query: 192 PDRHLLY 198
            D   L+
Sbjct: 312 QDVTELF 318



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 51/148 (34%), Gaps = 11/148 (7%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
            + ++  I    + E  E +  I+        P  E      +        ++++    I
Sbjct: 435 DELSFCWIVDFPMFEYNEEDKKIDFSHNPFSMPQGEMEALEQHSPLDILAYQYDIVCNGI 494

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMG 325
           EL +       P      FE               +D  F   +       P   GIA G
Sbjct: 495 ELSSGAIRNHRPDIMYKAFEI-------AGYPHDEVDARFGHMIEAFKHGAPPHGGIAPG 547

Query: 326 FDRLVMLVTGANNINEVIWTPFSQSNQE 353
            DRLVM++    NI EVI  P +QS Q+
Sbjct: 548 LDRLVMILRDEQNIREVIAFPMNQSAQD 575


>gi|170691432|ref|ZP_02882597.1| aspartyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170143637|gb|EDT11800.1| aspartyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 599

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  E +            P  E              K +
Sbjct: 424 KANGLVESGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLESDPARCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 67/184 (36%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y     FI+I++  L   +P     ++    T       
Sbjct: 133 RRPQMQHNLRLRYRVAIEVRKYLDTLGFIDIETPMLTKSTPEGARDYLVPSRTNP----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLSEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +IR   +                  +   +  +EA  R+ +   DL   L+  
Sbjct: 247 IRDLFEAMIRHVFKETIGVSLD---------EKFPVMEYSEAMRRFGSDKPDLRVKLEFT 297

Query: 190 DQPD 193
           D  D
Sbjct: 298 DLTD 301


>gi|68536118|ref|YP_250823.1| aspartyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|97196643|sp|Q4JVF2|SYD_CORJK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|68263717|emb|CAI37205.1| aspS [Corynebacterium jeikeium K411]
          Length = 600

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 21/189 (11%)

Query: 16  YRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR+     L  R+ +  + R    E+ F EI++ +L   +P      R F     ++  
Sbjct: 133 LRRKTQGDALRLRSRVNQAARGVLAEHDFTEIETPTLTRSTPEG---ARDFLVPARLR-- 187

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    E
Sbjct: 188 -PGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQE 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     I+    +    +I +              +T A+A   Y +       D   
Sbjct: 247 DVISLAEEILVAIWKEIGYEIST----------PIPRMTYADAMKYYGSDKPDLRFDIQI 296

Query: 191 QPDRHLLYL 199
                    
Sbjct: 297 TECTDFFKN 305



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 69/258 (26%), Gaps = 34/258 (13%)

Query: 114 QPEFTMLEWYRAHESYE------QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           Q E+                             +  A +   +            ++ E 
Sbjct: 312 QNEYVGAVVMEGGADQPRRQLDAWQEWAKQRGAKGLAYILVGEDGELSGPVAKNITDEER 371

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLY----LQAQQAGIRVAHDDTWSDIFSRILI 223
             +AE        D         +P R LL       A + G+    D  ++ +    L 
Sbjct: 372 AGIAEHVGAKPG-DCIFFAAGETKPSRALLGAARGEIANKLGLIKEGDWAFTWVVDAPLF 430

Query: 224 EKIEP----------NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           E              +            P PE                +++     E+  
Sbjct: 431 EPAADATASGDVALGHSAWTAVHHAFTSPKPEYLDNFDENPGEALAYAYDIVCNGNEIGG 490

Query: 274 ACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDR 328
               +  P  Q   F+     E + ++K            L       P   GIA G+DR
Sbjct: 491 GSIRIHQPDVQERVFKVMGITEEEAREKFG--------FLLDAFAFGAPPHGGIAFGWDR 542

Query: 329 LVMLVTGANNINEVIWTP 346
           +V L+ G ++I +VI  P
Sbjct: 543 IVSLLGGFDSIRDVIAFP 560


>gi|332876626|ref|ZP_08444386.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332685459|gb|EGJ58296.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 582

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 74/224 (33%), Gaps = 27/224 (12%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+ +   +R Y  E  FIE+++  L   +P      R F     +        Y
Sbjct: 138 RDNLIFRHKVGIMVRNYLSEQGFIEVETPVLIKSTPEG---ARDFVVPSRMN---PGEFY 191

Query: 78  -LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   + L+  G +K F     +R+ +     QPEFT ++   +    E +++  
Sbjct: 192 ALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDIIQTF 251

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGTTLDN 188
             + +   +                F     +T AEA   Y          +  G   D 
Sbjct: 252 EGLAKHLLKELKGL----------EFGAFPRMTYAEAMKTYGNDKPDIRFGMKFGELNDL 301

Query: 189 PDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLG 231
               D  +        GI V   +         ++     P +G
Sbjct: 302 AQHRDFKVFNEAELVVGIAVPGANSYTRKEIDALVEWVKRPQVG 345



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 46/154 (29%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R   +     +    L+E  E              P PE         
Sbjct: 404 ALRMELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  ++L     E+      + +   Q   FE           E       FL    
Sbjct: 464 GAVRANAYDLVLNGNEVGGGSIRIFNQELQAKMFE-----LLGFTPEQAQAQFGFLMNAF 518

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A GFDRLV L+ G   I + I  P
Sbjct: 519 RYGAPPHGGLAFGFDRLVALLGGQETIRDFIAFP 552


>gi|317480093|ref|ZP_07939204.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|316903770|gb|EFV25613.1| aspartyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 585

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 66/199 (33%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R+Y     FIE+++  L   +P      R F     +    
Sbjct: 132 RRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +                      +  A+A  +Y   D           
Sbjct: 247 INLFEGMAKYLFKEIRG---------VEMNEPFMRMPWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFPVFDN 312



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  +    +        +P  E         
Sbjct: 405 ELRLEMGNQLGLRDKNKFVCLWVVDFPMFEWSDEEGRLMAMHHPFTHPKDEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    IE+      + D   Q   FE           E         +   
Sbjct: 465 TAVRADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEIL-----GFTPEKAQEQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V +  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSIFAGLDSIRDCIAFP 553


>gi|228471929|ref|ZP_04056698.1| aspartate--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276698|gb|EEK15406.1| aspartate--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 582

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 73/224 (32%), Gaps = 27/224 (12%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+ +   +R Y     FIE+++  L   +P      R F     +        Y
Sbjct: 138 RDNLIFRHKVGMIVRNYLSGQGFIEVETPVLIKSTPEG---ARDFVVPSRMN---PGEFY 191

Query: 78  -LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   + L+  G +K F     +R+ +     QPEFT ++   +    E +++  
Sbjct: 192 ALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDIIQTF 251

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGTTLDN 188
             + +   +                F     +T AEA   Y          +  G   D 
Sbjct: 252 EGLAKHLLKELKGL----------EFGAFPRMTYAEAMKTYGNDKPDIRFGMKFGELNDI 301

Query: 189 PDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLG 231
               D  +        GI V   +         ++     P +G
Sbjct: 302 AQHRDFKVFNEAELVVGIAVPGANSYTRKEIDTLVEWMKRPQIG 345



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 48/158 (30%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R   +     +    L+E  E              P PE         
Sbjct: 404 ALRMELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                  ++L     E+      + +   Q   FE      ++ Q +       +     
Sbjct: 464 GAVRANAYDLVLNGNEVGGGSIRIFNQELQAKMFELLGFTPEQAQAQFGFLMNAFK---- 519

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   G+A GFDRLV L+ G   I + I  P
Sbjct: 520 -----YGAPPHGGLAFGFDRLVALLGGQETIRDFIAFP 552


>gi|289674667|ref|ZP_06495557.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 258

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 51/162 (31%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N              P          
Sbjct: 74  EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFTALHHPFTAPKCTPEELEAN 133

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 134 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 188

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 189 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 230


>gi|317401441|gb|EFV82073.1| aspartyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 595

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 8/191 (4%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLL--YLQAQQAGIRVAHDDTWSDIFSRILI 223
           +     +    +   D    +++     R  +      ++ G+          +    + 
Sbjct: 383 KRTGAQDGDIIFFGADREKVVNDAIGALRVKIGHSEFGKKTGL-FTAGWMPLWVVDFPMF 441

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E +            P               F K +++     E+      +     
Sbjct: 442 EYDEEDGRYTAAHHPFTSPKDGHEDFLETDPSKAFAKAYDMVLNGWEIGGGSVRIHREEV 501

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q   F    +  K    E        L  L    P   GIA G DR+V ++TGA +I +V
Sbjct: 502 QSKVF----RALKIGAEEAREKFGYLLDALQYGAPPHGGIAFGLDRIVTMMTGAESIRDV 557

Query: 343 IWTPFSQSNQE 353
           I  P +Q  Q+
Sbjct: 558 IAFPKTQRAQD 568



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 69/184 (37%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R  +    R++  +  FI+I++  L   +P     ++            
Sbjct: 130 RRPQMQRNLMLRYRVSIETRKFLDQLGFIDIETPMLAKSTPEGARDYLVPSRVNAGHFFA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 190 LPQ------SPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNELE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +   N+IR   +V                     +T  EA  RY +   DL   L+  
Sbjct: 244 IREIFENMIRHVFKVVQGVDL---------AEPFPIMTWTEAMRRYGSDKPDLRVQLEFT 294

Query: 190 DQPD 193
           D  D
Sbjct: 295 DMTD 298


>gi|238879131|gb|EEQ42769.1| hypothetical protein CAWG_00990 [Candida albicans WO-1]
          Length = 580

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 76/234 (32%), Gaps = 20/234 (8%)

Query: 22  LLKRNMIQSSLREYFV-ENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+     +R+ F+  ++F+EI++  L + +P      R F       +       L 
Sbjct: 193 LRLRSEAARLIRDIFIKNHEFVEIETPLLFKSTPEG---AREFLVPTRSFNKF---YALP 246

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+++G  + F  A  +R+ +     QPEFT ++   +  +    +   +  
Sbjct: 247 QSPQQYKQILMSSGFTRYFQVAKCFRDEDLRSDRQPEFTQIDLEMSFVNNSDQVGIVVED 306

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSE-----------PEYITVAEAFARYANIDLGTTLDN 188
           +            +++  +     E              +   +   +Y  ID      N
Sbjct: 307 VIHNVWNKVGGKLTYKVNDEGFLVEADLAEVGKSLQFSKLNYIDVLVKY-GIDKPDLRSN 365

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                    ++  + A   V         F     +   P   I+      R P
Sbjct: 366 LSFISLEDFFIAKENADFPVVEVCVLKGAFDASSGKYKLPKSFIDDHNFSSRRP 419


>gi|15838454|ref|NP_299142.1| aspartyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|24212425|sp|Q9PCC5|SYD_XYLFA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|9106945|gb|AAF84662.1|AE004007_1 aspartyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 589

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 68/211 (32%), Gaps = 30/211 (14%)

Query: 3   QIPSQPWWNR--DFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     N   D   +      RRP +      R  +  +LR +   + F +I++  L 
Sbjct: 110 PLPFHAHENPGEDIRLKYRYLDLRRPEMQRMQRTRIKLVQALRRHLDMHGFQDIETPILT 169

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +        Y L  SP+   + L+ AG ++ +  A  +R+  
Sbjct: 170 KATPEGA---RDFLVPARMH---PGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEA 223

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                Q EFT L+   A  S   +      +IR   +                      +
Sbjct: 224 LRADRQLEFTQLDMEFAFVSERDVQDFVEEMIRRVFKEVAGIELDTT---------FPRM 274

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           T  EA  R+   D      N +  D   L  
Sbjct: 275 TWTEAMRRF-GSDKPDLRINLELIDVAALVA 304



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 51/157 (32%), Gaps = 14/157 (8%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-IYPA 254
            L L+A +    +  D     +    + E  E              PA    +      A
Sbjct: 408 ALRLKAGKDFALITADWRPLWVTDFPMFEWDEEAQRYVALHHPFTAPAAIDDIDELRAHA 467

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
               ++ +++     E+      +  P  QR  FE     E + + K            L
Sbjct: 468 RTALSRGYDMVLNGNEIGGGSIRIHRPEMQRAVFELLGITEDEARAKFG--------FLL 519

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P   GIA G DR+  L+ G  +I +VI  P
Sbjct: 520 DALNYGAPPHGGIAFGIDRIAALIAGTESIRDVIPFP 556


>gi|288926986|ref|ZP_06420881.1| aspartate--tRNA ligase [Prevotella buccae D17]
 gi|288336232|gb|EFC74618.1| aspartate--tRNA ligase [Prevotella buccae D17]
          Length = 587

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 64/187 (34%), Gaps = 17/187 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +    QF+E+++  L   +P      R F     +    
Sbjct: 132 RRAAVRKNLELRHRMTILIRNFLDSRQFMEVETPILIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVAGVDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQEDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    ++ R   +                    E +   +A  RY   D        +  
Sbjct: 247 LNIFEDMARHLFKEIRG----------VELPPLERMKWHDAMRRY-GSDKPDVRFGMEFV 295

Query: 193 DRHLLYL 199
           +    + 
Sbjct: 296 ELKEAFA 302



 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 41/137 (29%), Gaps = 8/137 (5%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
                +   +     E    +            +  L + +P   R    ++     IE+
Sbjct: 423 KCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDLPLLDEHPEQVRAV-AYDFVCNGIEV 481

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL-TEMPQSSGIAMGFDRL 329
                 + D   Q   FE           E       FL        P  +G+A G DR 
Sbjct: 482 GGGSLRIHDTRLQEKMFEVL-----GFTPERAEAQFGFLMNAFKYGAPPHAGLAFGLDRF 536

Query: 330 VMLVTGANNINEVIWTP 346
           V ++ G ++I + I  P
Sbjct: 537 VSILAGLDSIRDCIAFP 553


>gi|83746621|ref|ZP_00943671.1| Aspartyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|83726755|gb|EAP73883.1| Aspartyl-tRNA synthetase [Ralstonia solanacearum UW551]
          Length = 622

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 64/197 (32%), Gaps = 9/197 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y  +  FI+I++  L   +P     ++            
Sbjct: 148 RRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 202

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 203 -GQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 261

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +                          +   R   ++     D    
Sbjct: 262 IRDLFEEMIRTVFKNTMSVELDATFPVMEFREAMARFGSDKPDLRVK-LEFTDVTDVMKD 320

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A   G RV
Sbjct: 321 VDFKVFSNPANAEGGRV 337



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                    +    + E  E +            P  E              K +++   
Sbjct: 444 FEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHREYLETDPGKCIAKAYDMVLN 503

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +     Q   F    +  K    E        L  L    P   GIA G 
Sbjct: 504 GWEIGGGSVRIFQEEVQSKVF----RALKIGEEEARAKFGFLLDALQYGAPPHGGIAFGL 559

Query: 327 DRLVMLVTGANNINEVIWTPFSQSNQE 353
           DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 560 DRIVTMMAGADSIRDVIAFPKTQRAQD 586


>gi|312866779|ref|ZP_07726992.1| aspartate--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097562|gb|EFQ55793.1| aspartate--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 584

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +   +   +  +    + E  E              P  E+        
Sbjct: 402 ALRVRLAKELDLIDNNQYNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETEHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++     EL      +     Q   F+     K+             L  + 
Sbjct: 462 SKVRAIAYDIVLNGYELGGGSLRINHKDLQERMFKALGFTKEA----ANEQFGFLLEAMD 517

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 518 YGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFP 550



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +      N           +   R+  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIEVTLPFPRMNYDDAMALYGSDKPDTRFEML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D        ++  
Sbjct: 296 LQDLTELVKGVDFKVFSEAPAV-KAIVVKGAADHYSRKDIDKLTE 339


>gi|317151960|ref|YP_004120008.1| aspartyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942211|gb|ADU61262.1| aspartyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 607

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 22/182 (12%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP      + RN    ++R Y     F+EI++  L   +P      R F     +    
Sbjct: 155 RRPSLARNFIIRNKAAQAVRRYLDALGFLEIETPVLTKSTPEG---ARDFLVPSRVN--- 208

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +     Q
Sbjct: 209 QGEFYALPQSPQLFKQMLMVSGMDRYFQIVKCFRDEDLRADRQPEFTQIDIEMSFTDEAQ 268

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++                           +T  +A   Y  +D          
Sbjct: 269 IQDMAEGLVTKIFAETIGAALPDV---------FPRMTYNDAMRDY-GVDKPDLRFGLKH 318

Query: 192 PD 193
            D
Sbjct: 319 ID 320



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 70/210 (33%), Gaps = 8/210 (3%)

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
           +  A +  ++   +Q+     FSE E  T+ E         L     + D  +  L  L+
Sbjct: 368 KGLAWIKVKEDGEWQSPIVKFFSEDEIATLRERTDCKPGDILFFQAGSADIANAALGNLR 427

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR-YPAPESALANIYPADPRFT 259
            +        D              +E N            + + +        +DP   
Sbjct: 428 CELGERFGLIDPKVFKPVWITDFPLLEYNPDEKRYVARHHPFTSAQPDQMATLASDPGNA 487

Query: 260 --KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             + +++     E+      +    +QR  F     +     +E        +  L    
Sbjct: 488 LARAYDMVINGYEVGGGSIRIHTAEQQRIMFAALGID----GDEAREKFGFLMDALKFGA 543

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   GIA G DRL+M++TG+ +I +VI  P
Sbjct: 544 PPHGGIAFGLDRLIMIITGSKSIRDVIAFP 573


>gi|317051008|ref|YP_004112124.1| aspartyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946092|gb|ADU65568.1| aspartyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 592

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 19/187 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R+ +  S+REY  E  F++I++  L   +P     ++            
Sbjct: 140 RRPEIQKHIINRHRLTRSMREYLYEKGFLDIETPVLTKSTPEGARDYLVPSRVNPGRFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G +K F     +R+ +     QPEFT L+   +    EQ
Sbjct: 200 LPQ------SPQLFKQLLMVSGYDKYFQIVKCFRDEDLRADRQPEFTQLDMEMSFIDREQ 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           L      +++        +                 ++  EA  R+ +   D    L+  
Sbjct: 254 LFALIEGLMQKLWRDIADREIP---------VPFPRLSYQEAMDRFGSDKPDTRFGLELQ 304

Query: 190 DQPDRHL 196
           D  D   
Sbjct: 305 DLSDLDF 311



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 50/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L  + AQ+ G+   +   +  +    L+E  E +            P  E         
Sbjct: 412 QLRLILAQRLGLIDNNQYNFLWVTDFPLLEWDEDSKRFMAMHHPFTSPLEEDFGLLESDP 471

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + ++L     E+      +     Q+  F            E        L  L 
Sbjct: 472 GAARARAYDLVLNGSEIGGGSIRIHTMELQQRMF----SLLGIGEEEARMKFGFLLDALE 527

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DR+ M+++G ++I +VI  P
Sbjct: 528 FGAPPHGGIAFGVDRIAMILSGTSSIRDVIAFP 560


>gi|296390678|ref|ZP_06880153.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 387

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 55/170 (32%), Gaps = 17/170 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI-----EPNLGINCCTILDRYP-APESAL 248
               +     G           + +R                 +       +P       
Sbjct: 196 DKAKIVCDALGALRIKVGHDLKLLAREWAPMWVVDFPMFEQNDDGSLSALHHPFTSPKCT 255

Query: 249 ANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                A+P     + +++     EL      + D   Q+  F      +    +E    +
Sbjct: 256 PAELEANPGAALSRAYDMVLNGTELGGGSIRIHDKSMQQAVF------RVLGIDEAEQEE 309

Query: 307 ED--FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           +    L  L    P   G+A G DRLVML+TGA++I EVI  P +QS  +
Sbjct: 310 KFGFLLDALKYGAPPHGGLAFGLDRLVMLMTGASSIREVIAFPKTQSAGD 359



 Score = 43.5 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 41/128 (32%), Gaps = 11/128 (8%)

Query: 90  LAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ 149
           + AG ++ +  A  +R+ +     QPEFT ++   +      ++     ++R   +    
Sbjct: 1   MVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLDESDIIGITEKMVRQLFKEVLD 60

Query: 150 KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                       F E  ++   EA  RY   D        +  D      + +       
Sbjct: 61  ----------VEFDEFPHMPFEEAMRRY-GSDKPDLRIPLELVDVADQLKEVEFKVFSGP 109

Query: 210 HDDTWSDI 217
            +D    +
Sbjct: 110 ANDPKGRV 117


>gi|207742315|ref|YP_002258707.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein
           [Ralstonia solanacearum IPO1609]
 gi|206593703|emb|CAQ60630.1| aspartyl-trna synthetase (aspartate--trna ligase)(asprs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 607

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 64/197 (32%), Gaps = 9/197 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y  +  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQYNLRLRYKVAMEVRKYLDDKGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +                          +   R   ++     D    
Sbjct: 247 IRDLFEEMIRTVFKNTMSVELDATFPVMEFREAMARFGSDKPDLRVK-LEFTDVTDVMKD 305

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A   G RV
Sbjct: 306 VDFKVFSNPANAEGGRV 322



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 45/147 (30%), Gaps = 5/147 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                    +    + E  E +            P  E              K +++   
Sbjct: 429 FEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHREYLETDPGKCIAKAYDMVLN 488

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +     Q   F    +  K    E        L  L    P   GIA G 
Sbjct: 489 GWEIGGGSVRIFQEEVQSKVF----RALKIGEEEARAKFGFLLDALQYGAPPHGGIAFGL 544

Query: 327 DRLVMLVTGANNINEVIWTPFSQSNQE 353
           DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 545 DRIVTMMAGADSIRDVIAFPKTQRAQD 571


>gi|89075783|ref|ZP_01162171.1| aspartyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048515|gb|EAR54090.1| aspartyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 596

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNAFLDIETPVLTKATPEGARDYLVPSRVHKGNFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +                      ++  EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMITEMWKELLNVDLGT----------FPIMSFEEAARRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +             +D    +
Sbjct: 293 VDVADIVKDVDFKVFSGPANDEKGRV 318



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 19/145 (13%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT--KRFELYACN 268
           D +       +     E N   +   +   + +P +       A+P       +++    
Sbjct: 421 DKSAWKPLWVVDFPMFEENEDGSLSAMHHPFTSPLNLTPEELAANPAAALSNAYDMVING 480

Query: 269 IELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
            E+      + +   Q   F+       E + K              L  L    P  +G
Sbjct: 481 YEVGGGSVRIHNSDMQSTVFDILGISADEQRLKFG----------FLLDALKFGTPPHAG 530

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           +A G DRLVML+ G +NI +VI  P
Sbjct: 531 LAFGLDRLVMLLCGTDNIRDVIAFP 555


>gi|108804189|ref|YP_644126.1| aspartyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|123368172|sp|Q1AWB4|SYD_RUBXD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|108765432|gb|ABG04314.1| aspartyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 600

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R R  +L R+ +   +R Y  E  F+E+++  L   +P     ++            
Sbjct: 140 RRERMRENILFRDRVVRYIRRYLAERDFVEVETPLLTKSTPEGARDYLVPSRLYPGQFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ F  A A R+ +Q    QPE T L+   ++ +   
Sbjct: 200 LPQ------SPQQFKQLLMVAGLERYFQIARALRDEDQRGDRQPEHTQLDLEMSYTT--- 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                 + +    E    +I          F     +T AEA  R+   D        + 
Sbjct: 251 -----QDEVLQLIEGLYTEIVERLTEKRVLFKPFPRLTYAEAMERF-GSDKPDLRFGLEL 304

Query: 192 PD 193
            D
Sbjct: 305 RD 306



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 15/148 (10%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           +  I    L E  E    I     +   P  E              + ++L A  +EL +
Sbjct: 433 FCWITDFPLFEYNEEEGRIEPMHHMFTMPREEDIPLLDTDPLAVTGQLYDLVANGVELAS 492

Query: 274 ACDELLDPIEQRHRF-----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFD 327
               +  P  Q+  F     ++E  E++             L       P   GIA G D
Sbjct: 493 GSIRIHRPDLQQKVFSIIGIDEEEAERRFG---------TLLRAFRYGAPPHGGIAPGID 543

Query: 328 RLVMLVTGANNINEVIWTPFSQSNQEEI 355
           RLVML+    NI EV+  P +Q+ ++E+
Sbjct: 544 RLVMLLRDEPNIREVMAFPKTQAARDEM 571


>gi|296875570|ref|ZP_06899642.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296433494|gb|EFH19269.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 584

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +   +   +  +    + E  E              P  E+        
Sbjct: 402 ALRVRLAKELDLIDNNQYNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETEHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++     EL      +     Q   F+     K+             L  + 
Sbjct: 462 SKVRAIAYDIVLNGYELGGGSLRINHKDLQERMFKALGFTKEA----ANEQFGFLLEAMD 517

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 518 YGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFP 550



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +      N           +   R+  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIEVTLPFPRMNYDDAMALYGSDKPDTRFEML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D        ++  
Sbjct: 296 LQDLTDLVKGVDFKVFSEAPTV-KAIVVKGAADHYSRKDIDKLTE 339


>gi|257126613|ref|YP_003164727.1| aspartyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257050552|gb|ACV39736.1| aspartyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 591

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 71/190 (37%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    ++KRN +  S+R++  EN F++ID+  L   +P      R F     I    
Sbjct: 133 RRPRMLNNIIKRNDMLFSIRKFMNENGFLDIDTPILAKATPEG---ARDFIVPSRIN--- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ +G +K +  A  +R+ +     QPEFT L++  +    E 
Sbjct: 187 KGDFYALPQSPQLFKQILMVSGVDKYYQLAKCFRDEDLRADRQPEFTQLDFEMSFVEQED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++    ++ +   +       +            E ++  +A   Y   D      +   
Sbjct: 247 ILNVTESLAKQVFKDVTGIEITEN---------FERMSYDDAMNFY-GSDKPDLRFDMKL 296

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 297 IDLSKETQNC 306



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 45/134 (33%), Gaps = 5/134 (3%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +     E N               +    +    D   T  +++     E+      + +
Sbjct: 435 MFEWSEEENRYKAQHHPFTSIKQEDRKYLDSNELDKIKTDSYDIVLNGYEIGGGSIRIHE 494

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
              Q   FEK    K+    E       FL  L   +P   G+A G DR +M +   N+I
Sbjct: 495 EELQEKVFEKLGLSKE----EQQDKFGFFLEVLKYGVPPHGGLAFGIDRWLMAMLKENSI 550

Query: 340 NEVIWTPFSQSNQE 353
            EVI  P +   Q+
Sbjct: 551 KEVIPFPKTNKGQD 564


>gi|68488367|ref|XP_711972.1| hypothetical protein CaO19.4478 [Candida albicans SC5314]
 gi|68488418|ref|XP_711947.1| hypothetical protein CaO19.11958 [Candida albicans SC5314]
 gi|46433295|gb|EAK92741.1| hypothetical protein CaO19.11958 [Candida albicans SC5314]
 gi|46433323|gb|EAK92768.1| hypothetical protein CaO19.4478 [Candida albicans SC5314]
          Length = 698

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 82/254 (32%), Gaps = 20/254 (7%)

Query: 2   HQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQ-FIEIDSMSL-QYSPGNETHI 59
             IP Q  + +      +  L  R+     +R+ F++N  F+EI++  L + +P      
Sbjct: 173 RDIPPQFRYLQLRTPYYQKSLRLRSEAARLIRDIFIKNHKFVEIETPLLFKSTPEG---A 229

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F       +       L  SP+   + L+++G  + F  A  +R+ +     QPEFT 
Sbjct: 230 REFLVPTRSFNKF---YALPQSPQQYKQILMSSGFTRYFQVAKCFRDEDLRSDRQPEFTQ 286

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE-----------PEYI 168
           ++   +  +    +   +  +            +++  +     E              +
Sbjct: 287 IDLEMSFVNNSDQVGIVVEDVIHNVWNKVGGKLTYKVNDEGFLVEADLAEVGKSLQFSKL 346

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +   +Y  ID      N         ++  + A   V         F     +   P
Sbjct: 347 NYIDVLVKY-GIDKPDLRSNLSFISLEDFFIAKENADFPVVEVCVLKGAFDASSGKYKLP 405

Query: 229 NLGINCCTILDRYP 242
              IN      R P
Sbjct: 406 KSFINDHNFSSRRP 419



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 10/125 (8%)

Query: 236 TILDRYPAPESALANIY--PADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P   + + +     +DP     + ++L    +E+      + DP  Q++ FE+ 
Sbjct: 558 FESTHHPFTMAKIEDYDLLESDPLKVRGEHYDLVINGVEVGGGSRRIHDPALQQYIFEEI 617

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +Q           +    L  L+   P  +G+A+GFDRL  ++ G+ +I +VI  P +QS
Sbjct: 618 LQISNF-----QQLFGHLLKALSMGCPPHAGLALGFDRLCAMLMGSTSIRDVIAFPKNQS 672

Query: 351 NQEEI 355
             + +
Sbjct: 673 GVDPV 677


>gi|322390475|ref|ZP_08063994.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142827|gb|EFX38286.1| aspartate--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 584

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +   +   +  +    + E  E              P  E+        
Sbjct: 402 ALRVRLAKELDLIDNNQYNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETEHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++     EL      +     Q   F+     K+             L  + 
Sbjct: 462 SKVRAIAYDIVLNGYELGGGSLRINHKDLQERMFKALGFTKEA----ANEQFGFLLEAMD 517

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 518 YGFPPHGGLAIGLDRFVMLLAGEDNIREVIAFP 550



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +      N           +   R+  +
Sbjct: 236 DLETSFLSDQEIQDITEGLIARVMKETKGIEVTLPFPRMNYDDAMALYGSDKPDTRFEML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D        ++  
Sbjct: 296 LQDLTELVKGVDFKVFSEAPAV-KAIVVKGAADHYSRKDIDKLTE 339


>gi|160889604|ref|ZP_02070607.1| hypothetical protein BACUNI_02030 [Bacteroides uniformis ATCC 8492]
 gi|156861121|gb|EDO54552.1| hypothetical protein BACUNI_02030 [Bacteroides uniformis ATCC 8492]
          Length = 585

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 66/199 (33%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R+Y     FIE+++  L   +P      R F     +    
Sbjct: 132 RRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +                      +  A+A  +Y   D           
Sbjct: 247 INLFEGMAKYLFKEIRG---------VEMNEPFMRMPWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFPVFDN 312



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  +    +        +P  E         
Sbjct: 405 ELRLEMGNQLGLRDKNKFVCLWVVDFPMFEWSDEEGRLMAMHHPFTHPKDEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    IE+      + D   Q   FE           E         +   
Sbjct: 465 AAVRADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEIL-----GFTPEKAQEQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V +  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSIFAGLDSIRDCIAFP 553


>gi|308504263|ref|XP_003114315.1| CRE-DARS-2 protein [Caenorhabditis remanei]
 gi|308261700|gb|EFP05653.1| CRE-DARS-2 protein [Caenorhabditis remanei]
          Length = 637

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 95/260 (36%), Gaps = 26/260 (10%)

Query: 22  LLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+    +LR++ VE   F+++D+ +L + +PG  T    F       +H      L 
Sbjct: 170 LRIRSEFVHNLRKFLVEKSGFVDVDTPTLFRRTPGGATE---FVVPAPPPNH-GMAYSLP 225

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +  + E +M+   ++
Sbjct: 226 QSPQQFKQLLMVGGIDRYFQIARCYRDEGSKGDRQPEFTQVDVEMSFTTQEGVMQLIEDM 285

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH---- 195
           I  A   +         ++  P S    I+ +EA  +Y  ID      +    D      
Sbjct: 286 ILSAWPESL--------IHLKPKSPFPRISYSEAMTKY-GIDKPDMRVSWQIEDVKTNIF 336

Query: 196 --LLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESALANIY 252
             L      +  + V      + I +      K    +  N       +P+ ++   ++ 
Sbjct: 337 NFLKKNDGDKIRVIVCRGAGKTPISNSTKDEWKRLIQMNENGRNFAICHPSHKTWFKSLK 396

Query: 253 PAD----PRFTKRFELYACN 268
                     T+   L  C 
Sbjct: 397 NEKILEEFGLTEEDALVVCW 416



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 89/311 (28%), Gaps = 16/311 (5%)

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            L   P +  H++  S    I        Y    P+      +   +  IF F       
Sbjct: 286 ILSAWPESLIHLKPKSPFPRISYSEAMTKYGIDKPDMRVSWQIEDVKTNIFNFLKKNDGD 345

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +   +            + +   + +       R  A         F+++      E   
Sbjct: 346 KIRVIVCRGAGKTPISNSTKDEWKRLIQMNENGRNFAICHPSHKTWFKSLKNEKILEEFG 405

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           +T  +A         G         +        +   +  AH      +FS      + 
Sbjct: 406 LTEEDALVVCWGESDGVYWTLGQLRNYVAEICGLRSKNVVTAHWVVDFPLFSFEEGHLVS 465

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
            +      T             +         + ++L    +E+      + +   QRH 
Sbjct: 466 THH---PFTAPVDKDKEMLYDEDNDRLLQITGQHYDLVINGVEMGGGSIRIENSEMQRHV 522

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN----INEV 342
            +   +  +++        E  L  L+   P   G A+G DR V ++T   N    + +V
Sbjct: 523 LKILSEPTEEM--------EHLLNALSHGAPPHGGFALGLDRFVAMLTSDGNPLTPVRDV 574

Query: 343 IWTPFSQSNQE 353
           I  P +++ ++
Sbjct: 575 IAFPKTKNGKD 585


>gi|158317668|ref|YP_001510176.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158113073|gb|ABW15270.1| aspartyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 619

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 16/188 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
              R +  L  R+ +  +LR  F +  F+E+++  L   +P      R F          
Sbjct: 140 RRDRMQRNLRTRSAVLGALRTAFADRGFVEVETPLLMPSTPEG---AREFVVPSRQ---F 193

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G ++ F  A   R+ +     Q EFT L+   +      
Sbjct: 194 PGSFYALPQSPQLFKQLLMVGGMDRYFQLARCLRDEDLRADRQYEFTQLDLEMSFV---- 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                 +I+   +        +    +     E E +T  +A  R+  +D        + 
Sbjct: 250 ---GVDDILDVVSAAVLSAAAAAAAGSGRAVPEIERLTWHDAMNRF-GVDKPDLRFGMEL 305

Query: 192 PDRHLLYL 199
            +   ++ 
Sbjct: 306 VELTAIFA 313



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 47/152 (30%), Gaps = 27/152 (17%)

Query: 219 SRILIEKIEPNLGINCCTILDRYPAP-ESALANIYPADPRFTKR---------FELYACN 268
             +    +               P P        +P D    +          ++L    
Sbjct: 426 GELRFAWVVDFPLFVGVDAATGRPKPGHHPFTRPHPDDVEKMESEPLAVRSLAYDLVLNG 485

Query: 269 IELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
            EL +    + +   Q+  F       +E + +             FL       P   G
Sbjct: 486 WELGSGSIRIHESELQQRVFGLLGISPEEAKARFG----------FFLTPFGYGAPPHGG 535

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            A G DRLV ++ G +NI EVI  P +QS  +
Sbjct: 536 FAFGIDRLVAVLAGEDNIREVIAFPKTQSGLD 567


>gi|21674146|ref|NP_662211.1| aspartyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|27923861|sp|Q8KCT7|SYD_CHLTE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|21647306|gb|AAM72553.1| aspartyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 603

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ + +++R+Y  +  FIEI +  L   SP      R F     +    
Sbjct: 146 RREKLHENIIFRSKLTAAVRKYLTDLDFIEIQTPILTSSSPEG---ARDFLVPSRLH--- 199

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ AG  + F  A  +R+ +      P EF  ++   +    +
Sbjct: 200 PGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFRDEDARADRSPGEFYQIDIEMSFIEQD 259

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            L      + +   E  + K  +              I+  +   RY   D        +
Sbjct: 260 DLFVILEGMFKHLVENMSHKRITQ--------FPFPRISYKDVMNRY-GSDKPDLRIPLE 310

Query: 191 QPDRHLLY 198
             D   L+
Sbjct: 311 IQDVTELF 318



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 57/150 (38%), Gaps = 13/150 (8%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPADPRFTKRFELYAC 267
             + ++  I    + E  E +  I+        P     AL + +P D     ++++   
Sbjct: 434 KDELSFCWIVDFPMFEYNEEDKKIDFSHNPFSMPQGEMEALESKFPLDI-LAYQYDIVCN 492

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIA 323
            IEL +       P      FE     K+        +D  F   +       P   GIA
Sbjct: 493 GIELSSGAIRNHRPDIMYKAFEIAGYSKE-------EVDARFGHMIEAFKHGAPPHGGIA 545

Query: 324 MGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            G DRLVM++    NI EVI  P +QS Q+
Sbjct: 546 PGLDRLVMILRDEQNIREVIAFPMNQSAQD 575


>gi|322392505|ref|ZP_08065965.1| aspartate--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144497|gb|EFX39898.1| aspartate--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 587

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 47/150 (31%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 VAYDIVLNGYELGGGSLRINQKELQERMF------KALGFSAEEANAQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEDNIREVIAFP 550



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLKNLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQLTKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|78188900|ref|YP_379238.1| aspartyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|97196622|sp|Q3AS30|SYD_CHLCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|78171099|gb|ABB28195.1| aspartyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 605

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 69/209 (33%), Gaps = 32/209 (15%)

Query: 2   HQIP----SQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           H +P     +   + +   + R            ++ R+ + +++R Y  E  F EI + 
Sbjct: 119 HPLPFSVADELPTSEELRLKYRFLDLRREKLHENIIFRSRLTAAVRRYLEEKNFTEIQTP 178

Query: 48  SLQ-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
            L   SP      R F     +        Y L  +P+   + L+ AG  + F  A  +R
Sbjct: 179 ILTSSSPEG---ARDFLVPSRLH---PGKFYALPQAPQQFKQLLMVAGFPRYFQIAPCFR 232

Query: 106 NGEQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
           + +      P EF  L+   A    E L +    ++       ++K  +           
Sbjct: 233 DEDARADRSPGEFYQLDMEMAFIEQENLFEILEGMLEHITSTMSKKRITQ--------VP 284

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPD 193
              I+  +   R+   D        +  D
Sbjct: 285 FPRISYRDVMNRF-GTDKPDLRIPLEIQD 312



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 51/149 (34%), Gaps = 11/149 (7%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
             + ++  I    + E  E    I+        P  E        A      ++++    
Sbjct: 433 KDELSFCWIVDFPMYEYNEEAKKIDFSHNPFSMPQGEMEALETKDALDILAYQYDIVCNG 492

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAM 324
           IEL +       P      F      ++        +D+ F   +       P   GIA 
Sbjct: 493 IELSSGAIRNHKPEIMYKAFAIAGYSRE-------EVDQRFGHMIEAFKLGAPPHGGIAP 545

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G DRLVM++    NI EVI  P +Q  Q+
Sbjct: 546 GLDRLVMILCDEQNIREVIAFPMNQQAQD 574


>gi|270296725|ref|ZP_06202924.1| aspartyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270272712|gb|EFA18575.1| aspartyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 585

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 66/199 (33%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R+Y     FIE+++  L   +P      R F     +    
Sbjct: 132 RRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +                      +  A+A  +Y   D           
Sbjct: 247 INLFEGMAKYLFKEIRG---------VEMNEPFMRMPWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFPVFDN 312



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  +    +        +P  E         
Sbjct: 405 ELRLEMGNQLGLRDKNKFVCLWVVDFPMFEWSDEEGRLMAMHHPFTHPKDEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    IE+      + D   Q   FE           E         +   
Sbjct: 465 AAVRADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEIL-----GFTPEKAQEQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V +  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSIFAGLDSIRDCIAFP 553


>gi|189218098|ref|YP_001938740.1| Aspartyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|238692082|sp|B3DX01|SYD_METI4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189184956|gb|ACD82141.1| Aspartyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 600

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 73/210 (34%), Gaps = 20/210 (9%)

Query: 16  YRRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR+  L     R+++ S +REY     F+E+++  L   +P      R F     +   
Sbjct: 139 LRRKKILNCLKVRHLVSSVVREYLSREGFLEVETPILSKSTPEG---ARDFLVPSRLS-- 193

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  +P+   + L+ AG +K F  A  +R+ +     QPEFT ++   +    E
Sbjct: 194 -PGKFYALPQAPQQYKQLLMVAGIDKYFQIARCFRDEDLRSDRQPEFTQIDLEASFVEVE 252

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +MK    +I+           S              +T +EA   Y +      ++   
Sbjct: 253 DIMKWVEEMIQLIFLKVLGIELS---------LPFVRLTYSEALDNYGSDKPDLRIEWQI 303

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
           Q    +      +    V          + 
Sbjct: 304 QDVGTVFKNTQFKLFRDVIEKGGVIKALNA 333



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 48/145 (33%), Gaps = 6/145 (4%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
               W   F       +E             +P   + L      D      +++    +
Sbjct: 431 WKFAWITDFPLFEYSPLEQKWNSVHHPFTRPHPEDLTKLNEGK-YDAIRALAYDIVLNGV 489

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDR 328
           EL      + +   Q   F      K++       +    L       P   GIA+G DR
Sbjct: 490 ELGGGSLRIYEKELQEKVFSILGIGKERQEL----LFGHLLKAFQYGAPPHGGIALGLDR 545

Query: 329 LVMLVTGANNINEVIWTPFSQSNQE 353
            VML+TG+ ++ EVI  P ++   +
Sbjct: 546 FVMLLTGSESLREVIAFPKNRHGVD 570


>gi|315608745|ref|ZP_07883723.1| aspartate--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315249595|gb|EFU29606.1| aspartate--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 587

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 64/187 (34%), Gaps = 17/187 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +    QF+E+++  L   +P      R F     +    
Sbjct: 132 RRAAVRKNLELRHRMTILIRNFLDSRQFMEVETPILIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVAGVDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQEDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    ++ R   +                    E +   +A  RY   D        +  
Sbjct: 247 LNIFEDMARHLFKEIRG----------VELPPLERMKWHDAMRRY-GSDKPDVRFGMEFV 295

Query: 193 DRHLLYL 199
           +    + 
Sbjct: 296 ELKEAFA 302



 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 41/137 (29%), Gaps = 8/137 (5%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
                +   +     E    +            +  L + +P   R    ++     IE+
Sbjct: 423 KCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDLPLLDEHPEQVRAV-AYDFVCNGIEV 481

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL-TEMPQSSGIAMGFDRL 329
                 + D   Q   FE           E       FL        P  +G+A G DR 
Sbjct: 482 GGGSLRIHDTRLQEKMFEVL-----GFTPERAEAQFGFLMNAFKYGAPPHAGLAFGLDRF 536

Query: 330 VMLVTGANNINEVIWTP 346
           V ++ G ++I + I  P
Sbjct: 537 VSILAGLDSIRDCIAFP 553


>gi|227555481|ref|ZP_03985528.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|227175391|gb|EEI56363.1| possible aspartyl-tRNA synthetase [Enterococcus faecalis HH22]
          Length = 286

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 61/159 (38%), Gaps = 17/159 (10%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           +  R+ +  ++R Y   + F++I++  L + +P     ++            + +     
Sbjct: 143 IKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARDYLVPSRVHAGHFYALPQ----- 197

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+ AG ++ +     +R+ +     QPEFT ++      + E++     N+
Sbjct: 198 -SPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQIDIETTFLTPEEIQTYTENM 256

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           +    +       S              ++  EA ARY 
Sbjct: 257 LAEVMKETKGIEIS---------VPFPRMSYDEAMARYG 286


>gi|226323914|ref|ZP_03799432.1| hypothetical protein COPCOM_01691 [Coprococcus comes ATCC 27758]
 gi|225207463|gb|EEG89817.1| hypothetical protein COPCOM_01691 [Coprococcus comes ATCC 27758]
          Length = 597

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 67/194 (34%), Gaps = 10/194 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ + +  R++  +  F+EI++  L   +P     ++            
Sbjct: 141 RRPDIQRNLMMRSRVATLARQFMAKEGFLEIETPFLIKSTPEGARDYLVPSRIHPGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIFKQLLMCSGYDRYFQIVKCFRDEDLRADRQPEFTQMDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                    +     +   R+    +  T    D 
Sbjct: 255 VIDINERLLAHLFKDVLDIDIQLPIQRMTWQEAMDRFGSDKPDIRFGMELVNVTETVKDS 314

Query: 192 PDRHLLYLQAQQAG 205
               +++  A +AG
Sbjct: 315 EF--VVFKNAIEAG 326



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 17/162 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q  +   ++  +  I    L+E  +              P  E         
Sbjct: 415 ALRLELARQMELLDKNEYKFLWITEFPLLEWSDEQNRFTAMHHPFTMPMEEDLQYIDSDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                K +++     E+      + +   Q   FE      ++ QE+             
Sbjct: 475 GRVRAKAYDIVLNGNEIGGGSVRIFNQEIQSKMFEVLGFTPEQAQEQFG----------F 524

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            L      +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 525 LLNAFKYGVPPHAGLAYGLDRLVMLMAKQDSIRDVIAFPKVK 566


>gi|168698078|ref|ZP_02730355.1| aspartyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 630

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 71/191 (37%), Gaps = 20/191 (10%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDH 71
            RRR     L+ R+ +   +R+Y   N F+E+++  L + +P      R +     + + 
Sbjct: 138 LRRRTLQKTLVLRHRLCKVIRDYMDANHFLEVETPLLGKSTPEG---ARDYLVPSRVFN- 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F  A   R+ +     QPEFT L+   +    E 
Sbjct: 194 -GEFFALPQSPQLYKQLLMISGYDRYFQIARCLRDEDLRADRQPEFTQLDVEMSFVERED 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           ++     +     +                      +  AEA A+Y +   DL   L+  
Sbjct: 253 VLSVMEKLAADIFDKCLGVKLP---------LPFPRLGYAEAMAKYGSDKPDLRFGLEIV 303

Query: 190 DQPDRHLLYLQ 200
           D  D       
Sbjct: 304 DITDIAGASEA 314



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 39/141 (27%), Gaps = 7/141 (4%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP--APESALANIYPADPRFTKRFELYA 266
           A    ++ +    +    E     +        P                   K +++  
Sbjct: 465 AEHFNFAWVLDFPMFTWNEEENRWDAMHHPFTAPMDEDLPNFWQNESLGKVRAKAYDMVL 524

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMG 325
              E+      +     Q   FE           +        L  L    P   GIA+G
Sbjct: 525 NGYEVGGGSIRIHRQDVQSRVFE----IFGMTPEDAQGRFGFLLDALKSGAPPHGGIALG 580

Query: 326 FDRLVMLVTGANNINEVIWTP 346
            DR  M++ G  NI +VI  P
Sbjct: 581 LDRWAMVIAGTTNIRDVIAFP 601


>gi|298529647|ref|ZP_07017050.1| aspartyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511083|gb|EFI34986.1| aspartyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 603

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 67/191 (35%), Gaps = 21/191 (10%)

Query: 9   WWNRDFHYR-RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
              +  +   RRP     L  R+ +   +R +   + F E+++  L   +P      R F
Sbjct: 139 LRLKHRYLDLRRPAVAGNLRLRSQVVHEIRNFLHSSGFTEVETPVLTRSTPEG---ARDF 195

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
                +         L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++ 
Sbjct: 196 LVPSRLS--QGHFYALPQSPQLFKQLLMCAGMDRYYQVVKCFRDEDLRADRQPEFTQVDM 253

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +    E +M +  N+I    +                 +  + +  + A A Y  +D 
Sbjct: 254 EMSFVEEEGVMSESENMIARLFKEVLDVELE---------TPFQRLDYSRAIADY-GLDR 303

Query: 183 GTTLDNPDQPD 193
                +    D
Sbjct: 304 PDVRFDLTLKD 314



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 41/128 (32%), Gaps = 8/128 (6%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +L    E    +         P                 + +++     E+      L  
Sbjct: 445 LLEWDGEEKRWMARHHPFTS-PKDGHMDLLEKEPGQALARAYDMVINGQEVGGGSIRLHT 503

Query: 281 PIEQRHRFEKEMQEKKKIY-NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
             +Q   F+        +   E+       L  L    P   GIA G DRLVML+ G ++
Sbjct: 504 REDQERMFKAL-----GMDLEESRNKFGFLLQALDYGAPPHGGIAFGLDRLVMLMAGCSS 558

Query: 339 INEVIWTP 346
           I +VI  P
Sbjct: 559 IRDVIAFP 566


>gi|315499999|ref|YP_004088802.1| aspartyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315418011|gb|ADU14651.1| aspartyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 593

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 69/209 (33%), Gaps = 26/209 (12%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  +   +      RR  L    + R+ +  S+R   V   F+E  +  L 
Sbjct: 111 PLPVFGEPEYPEEIRLKNRFLDLRRETLHKNIVLRSRVIQSIRNRMVAQGFLEYQTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             SP      R F     +     K   L  +P+   + L+ +G ++ F  A  +R+ + 
Sbjct: 171 ASSPEG---ARDFLVPSRLH--AGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDL 225

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
                 EF  L+   +  +         ++      V +     F           + I 
Sbjct: 226 RADRSLEFYQLDIEMSFVT-------QEDVFAAIEPVMHGLFTEFGEGKRVSSYPFQRIP 278

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLY 198
             E+ A+Y   D     +  +  D    +
Sbjct: 279 YKESIAKY-GSDKPDLRNPIEMQDVSEHF 306



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 47/157 (29%), Gaps = 15/157 (9%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
              +       +  I    + E  E    ++        P  E               ++
Sbjct: 418 DLNLVDEDQFRFCWIVDFPMFEYNEDEKKVDFSHNPFSMPQGEMEALLTKDPLDILAYQY 477

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE-----KEMQEKKKIYNETYPIDEDFLACL-TEM 316
           ++     ELC+              FE      ++ E +             L       
Sbjct: 478 DIVCNGYELCSGAIRNHKQEIMLKAFEIAGYGADVVESQFGGM---------LNAFKYGA 528

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G+A G DR+VML+ G   I EVI  P +Q  Q+
Sbjct: 529 PPHGGLAPGIDRIVMLLAGQTAIREVIAFPLNQQGQD 565


>gi|319902143|ref|YP_004161871.1| aspartyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319417174|gb|ADV44285.1| aspartyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 585

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 67/199 (33%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R+Y     FIE+++  L   +P      R F     +    
Sbjct: 132 RRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQDDI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     +          K    +  +         +  A+A  +Y   D           
Sbjct: 247 INLFEGM---------AKYLFKEIRDVELTEPFLRMPWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFSVFDN 312



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEVAGQLGLRDKNKFALLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    IE+      + D   Q   FE           E         +   
Sbjct: 465 AAVRADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEIL-----GFTPEKAQEQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V +  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSIFAGLDSIRDCIAFP 553


>gi|168334873|ref|ZP_02692995.1| aspartyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 687

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 68/212 (32%), Gaps = 33/212 (15%)

Query: 3   QIPSQPWWNRDFHYR----------RRPF----LLKRNMIQSSLREYFVENQFIEIDSMS 48
            +P     + +              RR      L  R+ IQ   ++Y   + FI +++  
Sbjct: 109 PLPFSL--DEEVREDLRLKYRFLDIRREAMISNLKFRHKIQKLTQDYLDNDGFISVETPM 166

Query: 49  LQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
           L   +P     ++            + +      SP+   + L+  G +K +  A  +R+
Sbjct: 167 LTKSTPEGARDYLVPSRVHPGEFYALPQ------SPQIFKQLLMVGGLDKYYQIARCFRD 220

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
            +     QPEFT ++   +    E +++    + +              ++N        
Sbjct: 221 EDLRADRQPEFTQVDMEMSFVEQEDVLRHLEKLFKY---------IFKHSMNIEFDDRFP 271

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
            IT   A  +Y +       D P      +  
Sbjct: 272 RITWKTAMDKYGSDKPDLRFDLPIVDITEVAR 303



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 52/158 (32%), Gaps = 11/158 (6%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A    +R   D     +      E  E              P  E          
Sbjct: 407 LRLEIADIFNLRRKDDYKILFVTDFPQFEYSEEEGRYLAMHHPFTMPYLEDISLIETDKG 466

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LAC 312
               + +++    +EL +    + D   Q+  F           +E   I E F   +  
Sbjct: 467 AVRAQAYDVVLNGVELGSGSVRIYDADIQQKMFXAL-----GFSDE--EIKERFGFMVDA 519

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                P  +G A G DRLVML+ GAN++ EVI  P ++
Sbjct: 520 FKYGTPPHAGFAFGLDRLVMLLVGANSLREVIAFPKTK 557


>gi|168181744|ref|ZP_02616408.1| aspartate--tRNA ligase [Clostridium botulinum Bf]
 gi|237796510|ref|YP_002864062.1| aspartyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259511853|sp|C3KTB6|SYD_CLOB6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|182675105|gb|EDT87066.1| aspartate--tRNA ligase [Clostridium botulinum Bf]
 gi|229260573|gb|ACQ51606.1| aspartate--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 593

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 65/194 (33%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +   + R+     +R++  EN F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 KGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQPEFTQIDMELSFVEEDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                    E     +   R+  +++    +    
Sbjct: 253 VIDLNEKLLAKVFKEVAGIDVKLPIERMPYKIAMEKYGSDKPDLRF-GMEINDLTEAVKN 311

Query: 192 PDRHLLYLQAQQAG 205
            +  +     +  G
Sbjct: 312 SEFKVFKGAIEAGG 325



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-- 257
            A++  I    +  +  I    L+   E             + A      ++   DP   
Sbjct: 417 LAKELDIINKDEFRFVWITEFPLLAYNEEEGRYQAEHHP--FTAIMDEDIDLLDTDPGKV 474

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             K +++     EL      + D   Q   F      K+K     +      L       
Sbjct: 475 RAKAYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEK----AWERFGFLLEAFKFGP 530

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DR++M + G  NI +VI  P
Sbjct: 531 PPHGGLAYGLDRMIMFLAGTENIKDVITFP 560


>gi|145594364|ref|YP_001158661.1| aspartyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|189082140|sp|A4X5Y3|SYD_SALTO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145303701|gb|ABP54283.1| aspartyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 607

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 64/192 (33%), Gaps = 26/192 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   R R            L  R+      R    E  F+EI++ +L   +P      R 
Sbjct: 116 DVRLRYRYLDLRRSGPASALRLRSAANQIARTVLHERDFLEIETPTLTRSTPEG---ARD 172

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F   + +Q        L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+
Sbjct: 173 FLVPVRLQ--PGTWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQPEFTQLD 230

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  + + ++     I+            +              IT  EA ARY   D
Sbjct: 231 IEMSFVTEDDVIDLGEAIVSRLWRELAGHQIT---------RPIPRITWHEAMARY-GSD 280

Query: 182 LGTTLDNPDQPD 193
                   +  +
Sbjct: 281 KPDLRYGVELTE 292



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 20/162 (12%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN-CCTILDRYP--APESALANIYPAD 255
             A++A +       +  +    + E++               +P  AP +   + +   
Sbjct: 407 EIARRANLVDESAWAFCWVVDAPMFERVTDREEAGAGGWTAVHHPFTAPNAEWMDRFEEA 466

Query: 256 PRFT--KRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDE 307
           P       +++     E+      +     Q+  F+      ++ ++K     E +    
Sbjct: 467 PDRALAYAYDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITPEQARDKFGFLLEAFK--- 523

Query: 308 DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                    P   GIA G+DR+ ML+ GA++I EVI  P ++
Sbjct: 524 ------YGPPPHGGIAFGWDRVCMLLAGADSIREVIAFPKTR 559


>gi|226950483|ref|YP_002805574.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254781725|sp|C1FKE5|SYD_CLOBJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226841119|gb|ACO83785.1| aspartate--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 593

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 65/194 (33%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +   + R+     +R++  EN F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 KGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQPEFTQIDMELSFVEEDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +                    E     +   R+  +++    +    
Sbjct: 253 VIDLNEKLLAKVFKEVAGIDVKLPIERMPYKIAMEKYGSDKPDLRF-GMEINDLTEAVKN 311

Query: 192 PDRHLLYLQAQQAG 205
            +  +     +  G
Sbjct: 312 SEFKVFKGAIEAGG 325



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-- 257
            A++  I    +  +  I    L+   E             + A      ++   DP   
Sbjct: 417 LAKELDIINKDEFRFVWITEFPLLAYNEEEGRYQAEHHP--FTAIMDEDIDLLDTDPGKV 474

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             K +++     EL      + D   Q   F      K+K     +      L       
Sbjct: 475 RAKAYDIVLNGEELGGGSIRIHDSKLQEKMFSVLGFTKEK----AWERFGFLLEAFKFGP 530

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DR++M + G  NI +VI  P
Sbjct: 531 PPHGGLAYGLDRMIMFLAGTENIKDVITFP 560


>gi|38233939|ref|NP_939706.1| aspartyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|62287571|sp|Q6NGZ4|SYD_CORDI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|38200200|emb|CAE49881.1| aspartyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 601

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 70/212 (33%), Gaps = 8/212 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L  R+    + R     + F+EI++ +L   +P      R F     +    
Sbjct: 136 RRPNQGAALRLRSQANKAARNVLDSHDFVEIETPTLTRSTPEGA---RDFLVPARL--KP 190

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 191 GSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDIEMSFVDQDDV 250

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     I+    ++   +I +   +    +++   +  ++      +I +    D     
Sbjct: 251 IALAEEIVSSLWKLIGYEIPT--PIPRMTYADAMRLYGSDKPDLRFDIKIVECTDFFKNT 308

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
              +   +   A +                  
Sbjct: 309 TFRVFQNEYVGAVVMDGGASQPRRQLDAWQEW 340



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 15/113 (13%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE----KEMQE 294
           + +P+    + +  +P       +++     E+      +     Q   F+     E + 
Sbjct: 458 FTSPKPEWLDSFDENPGEATAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEDEA 517

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           ++K            L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 518 REKFG--------FLLDAFAFGAPPHGGIAFGWDRIVSLLGGFSSIRDVIAFP 562


>gi|227496189|ref|ZP_03926495.1| aspartate--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226834272|gb|EEH66655.1| aspartate--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 599

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 69/187 (36%), Gaps = 17/187 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ +  + R+    + F+EI++ +L   +P      R F     +    
Sbjct: 131 RRSSMQHAIRLRSQVSQAARKVLASHDFVEIETPTLTRSTPEG---ARDFLVPARL--AP 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    E +
Sbjct: 186 GSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDIEMSFVEQEDV 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +K   ++++    +    + +             ++T  +A  +Y   D        +  
Sbjct: 246 IKVAEDVLKEVWALIGYDLPT----------PIPHMTYKDAMEKY-GSDKPDLRFGLELT 294

Query: 193 DRHLLYL 199
           D    + 
Sbjct: 295 DLTEYFK 301



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
             + +P+    + +  DP       +++     E+      +     Q+  F        
Sbjct: 451 HAFTSPKPEWLDSFDKDPGHALAYAYDIVCNGNEIGGGSIRIHRNDVQKRVFNVMGI--- 507

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L       P   GIA G+DR+V L+T A++I +VI  P
Sbjct: 508 -GEEEAQAKFGFLLDAFKFGAPPHGGIAFGWDRIVSLLTHADSIRDVIAFP 557


>gi|186475150|ref|YP_001856620.1| aspartyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238689443|sp|B2JCV5|SYD_BURP8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|184191609|gb|ACC69574.1| aspartyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 599

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  E              P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDEEENRYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DIVLNGWEIGGGSVRIFQEDVQSKVF----RALKIGAEEARLKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y     FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAMEVRKYLDSRGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLSEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++ R   +         +                +   R   ++     D    
Sbjct: 247 IRDLFEDMTRHVFKETIGVELDAKFAVMPYSEAMSRFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANTKDGRVA 323


>gi|325268075|ref|ZP_08134721.1| aspartate--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324980460|gb|EGC16126.1| aspartate--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 602

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 65/197 (32%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      ++      D    
Sbjct: 245 IMDITEGMAKQVFKDALGVELGDFPRMPYSEAMFYYGS--DKPDMRISLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A   G RV
Sbjct: 303 EEFKVFRGAADMKGGRV 319



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 46/156 (29%), Gaps = 8/156 (5%)

Query: 195 HLLYLQAQQAGIR---VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
            L     ++ G        +     +    + E  E N            P P       
Sbjct: 413 ALRIKIGKEHGADNGYFVDEWKPLWVVDFPMFEYDEENDRWAAMHHPFTSPKPGHEDLME 472

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              +    + +++     E+      +     Q   F       K    E        L 
Sbjct: 473 SDPENCLARAYDMVLNGWEIGGGSIRIHRADIQEKVF----AALKITPEEQQEKFGFLLD 528

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DRLV L+TGA +I +VI  P
Sbjct: 529 NLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFP 564


>gi|150005727|ref|YP_001300471.1| aspartyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|166225320|sp|A6L585|SYD_BACV8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149934151|gb|ABR40849.1| aspartyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 587

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 68/200 (34%), Gaps = 22/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R Y     F+E+++  L   +P      R F     +   
Sbjct: 131 LRRNCVRKNLELRHKMTMEVRRYLDSKGFLEVETPMLVGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +       S              +T A+A  +Y   D          
Sbjct: 246 IISTFEGMAKHLFKELRGVELS---------EPFLRMTWADAI-KYYGSDKPDLRFGMKF 295

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  D
Sbjct: 296 VE---LMDIMKGHGFSVFDD 312



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEVGRQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    +E+      + D   Q   FE           E         +   
Sbjct: 465 AAVRADAYDMVVNGVEVGGGSIRIHDSQLQAKMFEIL-----GFTPERAQEQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|121603698|ref|YP_981027.1| aspartyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120592667|gb|ABM36106.1| aspartyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 605

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 43/146 (29%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +++G+          +    + E  E     +        P                 K 
Sbjct: 431 KKSGL-FTKGWKPLWVVDFPMFEYDEDGKRWSAVHHPFTAPKDGHEDWMDTDPGRCIAKA 489

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   F            E        L  L    P   
Sbjct: 490 YDMVLNGWELGGGSVRIHRADVQSKVFSALNI----GPEEAQLKFGFLLDALQYGAPPHG 545

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR+V ++TGA +I +VI  P
Sbjct: 546 GLAFGLDRIVTMMTGAESIRDVIAFP 571



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 65/184 (35%), Gaps = 20/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +    R++   N FI+I++  L   +P     ++            
Sbjct: 141 RRPYMQNNLMLRYRVAMETRKFLDANGFIDIETPMLTKSTPEGARDYLVPSRVNE----- 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 196 -GQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFMGEQE 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +I    +                  E   +  A+A  RY +   DL   L+  
Sbjct: 255 IRDMFQGMISNMFKTVLNTDLG----------EFPVMAYADAMHRYGSDKPDLRVNLEFT 304

Query: 190 DQPD 193
           +  D
Sbjct: 305 ELTD 308


>gi|326692514|ref|ZP_08229519.1| aspartyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 589

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 66/195 (33%), Gaps = 8/195 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ I SS  ++  +N FI I++  L   +P     ++            
Sbjct: 133 RRPEMQKNLRIRSKIMSSAMKFMDDNDFINIETPILAKSTPEGARDYLVPSRIFPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A A+R+ +     QPEFT ++   +  S ++
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQPEFTQMDLETSFMSADE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +       ++               +    + E       +        +L    +    
Sbjct: 247 IRALVNEWVKTMMHDVIGYDLDTATIQTLTWEEAMTRFGTDKPDLRIPYELKDLSETVKD 306

Query: 192 PDRHLLYLQAQQAGI 206
            +  +     +  G+
Sbjct: 307 SEFGVFANAVKDGGV 321



 Score = 92.4 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 46/147 (31%), Gaps = 13/147 (8%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR--FTKRFE 263
           I   +   ++ I    L E  E              P            DP     + ++
Sbjct: 418 IDQDNPWAFAWIVDWPLFEYSEEFNRWIAAHHPFTMPNEADLHYLDEGEDPHQAHAQSYD 477

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM----PQS 319
           L     EL +    +     Q    +           E       FL  L  M    P  
Sbjct: 478 LVLNGYELGSGSIRIHRMDVQEKMLKAL-----GFTPEAAHEAFGFL--LEGMEYGFPPM 530

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            GIA+G DRL ML+ G +NI EVI  P
Sbjct: 531 GGIALGLDRLAMLLAGQDNIREVIAFP 557


>gi|325479560|gb|EGC82656.1| aspartate--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 582

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 70/231 (30%), Gaps = 18/231 (7%)

Query: 6   SQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           S+    +  +   R       L  R+ I  ++REY  EN F E+++  L   +P     +
Sbjct: 120 SENLRLKYRYLDMRKPSVQRNLKLRSDIVRTIREYMYENDFTEVETPFLTKPTPEGARDY 179

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+    ++ F     +R+ +     QPEFT
Sbjct: 180 LVPSRINSGKFYALPQ------SPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQPEFT 233

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  + + ++     +++   +              +           +   RY 
Sbjct: 234 QMDLEMSFSNQDDVIAMNEGLLKELFDKYTDYDLKLPIDRMDYSEAMNSYGSDKPDLRYG 293

Query: 179 NI-----DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
                  ++    D     D        +    +    +       ++   
Sbjct: 294 YKIEDVSEVFVDSDFKVFADNTKDGKSVRALNFKGIAGNYSRKQLDKLTDF 344



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 55/161 (34%), Gaps = 14/161 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   + +  +     + +  + E  E              P  +     +   
Sbjct: 406 ALRRKVAKDNDL-IEKEYALCWVVNFPMFEYSEEEDRYVAQHHPFTMPNEDDIDLLLTEP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +   T+ +++     E+      + +   Q   FE     E   K K           F+
Sbjct: 465 EKVRTQAYDIVINGDEMGGGSVRINNSELQEKVFEALKLSEEDIKNKFG--------FFI 516

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             L    P  +G+A G DRL+ML    +NI ++I  P +QS
Sbjct: 517 EALQYGTPPHAGLAYGLDRLLMLFAKTDNIKDIIAFPKTQS 557


>gi|300784607|ref|YP_003764898.1| aspartyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299794121|gb|ADJ44496.1| aspartyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 591

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 68/195 (34%), Gaps = 22/195 (11%)

Query: 11  NRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +   R       +  R+ +  + RE      F+EI++ ++   +P      R F  
Sbjct: 123 LKHRYLDLRRSGPAAAMRLRSEVSRAAREVLHAQDFVEIETPTMTRSTPEG---ARDFLV 179

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +         L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   
Sbjct: 180 PARL--KPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQPEFTQLDIEM 237

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    + ++    +I+    ++   +                 IT  EA A+Y   D   
Sbjct: 238 SFVEQDDVIALGEDIVSALWKLIGHE----------IPRPIPRITYHEAMAKY-GSDKPD 286

Query: 185 TLDNPDQPDRHLLYL 199
              + +  D    + 
Sbjct: 287 LRFDLEITDMTEFFA 301



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 13/161 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP-----NLGINCCTILDR-YPAPESAL 248
                  ++ G+   +  ++  +    L   +E       +G    T +   + +P    
Sbjct: 399 AARDEIGKRLGLIDENAWSFVWVVDAPLFAPVEDIGDDVAVGSGKWTAVHHAFTSPTPEW 458

Query: 249 ANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
            + +  DP       +++     E+      +     Q+  F            E     
Sbjct: 459 IDKFEQDPGNALAYAYDIVCNGNEIGGGSIRIHRGDVQKRVF----SLMGLGEEEAQEKF 514

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              L       P   GIA G+DR+VML+  A+++ +VI  P
Sbjct: 515 GFLLDAFAFGPPPHGGIAFGWDRIVMLLAKADSLRDVIAFP 555


>gi|224531685|ref|ZP_03672317.1| aspartyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511150|gb|EEF81556.1| aspartyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 586

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A   G+   +   +  ++   L E  E          +   P            
Sbjct: 405 QIRIKIANDLGLIDENKFEFLWVYDFPLFEYDENTKTYTPAHHMFSLPKKRYITNLEKNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
           +    + ++L    IEL +    + +   Q+  F     +K+K  +        FL  L 
Sbjct: 465 NKAIGEIYDLVLNGIELGSGSIRIHNKKLQQRIFNIIGFQKEKSED----RFGFFLKALE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML+T + +I +VI  P
Sbjct: 521 YGAPNHGGIAIGIDRLIMLMTKSISIKDVILFP 553



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 99/299 (33%), Gaps = 17/299 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + V+ +F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCHATHLIRNFLVKRKFLELETPTFVKSTPEG---ARDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +                +   R+       + +  + 
Sbjct: 245 IFKLIENMLFSIFKNCLNINLPKKFKKITYKKAMNKYGSDKPDTRFELELQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                      +  I++      +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 305 EFNEFKDTLKNKGSIKILIVKDKADKFSRAKINNLEEIAKLYKTRGLY-FTKIENNKFSG 363

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
             A    T+  +L        N        +  E   +   +++ K         IDE+
Sbjct: 364 GIAKFLKTEEQQLIKTYSLENNDIIFFTANNKWETACKAMGQIRIKIANDL--GLIDEN 420


>gi|119868391|ref|YP_938343.1| aspartyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|166225366|sp|A1UFE5|SYD_MYCSK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119694480|gb|ABL91553.1| aspartyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 590

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 29/199 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L  R+ + ++ RE    + F+EI++ ++   +P      R 
Sbjct: 118 EARLKYRYLDLRREGPGKALRLRSKVNAAAREVLARHDFVEIETPTMTRSTPEGA---RD 174

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     +Q       Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L
Sbjct: 175 FLVPARLQ---PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQL 231

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + ++     I++    +    + +              IT AEA  R+   
Sbjct: 232 DMEMSFVDADDVIAVSEEILKALWALIGHDLPT----------PLPRITYAEAMHRF-GT 280

Query: 181 DLGTTLDNPDQPDRHLLYL 199
           D        +  +    + 
Sbjct: 281 DKPDLRFGLELVECKEFFA 299



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 36/106 (33%), Gaps = 5/106 (4%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P P+S               +++     E+      +     Q   F     E    ++E
Sbjct: 454 PQPQSEATFDTDPAGALADAYDIVCNGNEIGGGSIRIHRRDVQERVFAMMGIE----HDE 509

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   L   T   P   GIA G+DR+  L+   ++I EVI  P
Sbjct: 510 AQEKFGFLLDAFTFGAPPHGGIAFGWDRITALLARMDSIREVIAFP 555


>gi|332286022|ref|YP_004417933.1| aspartyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330429975|gb|AEC21309.1| aspartyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 596

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 61/172 (35%), Gaps = 17/172 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R  +   +R+Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPQMQQNLMLRYRVSIEVRKYLDNLGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 186 -GQFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEEQ 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           + +    +IR                          +T  EA  RY +    
Sbjct: 245 IREIFEGMIRHVFARVQSVELP---------VAFPTMTWEEAMRRYGSDKPD 287



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 38/140 (27%), Gaps = 5/140 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                    +    + E  E              P                 K ++L   
Sbjct: 427 FEAGWKPLWVVDFPMFEYDEEEGRYFAAHHPFTSPKDGHEDLLEKDPASALAKAYDLVLN 486

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +     Q   F+    + +    E        L  L    P   G+A G 
Sbjct: 487 GWEVGGGSVRIHRADIQTKVFQALNIDAE----EARAKFGFLLDALQYGAPPHGGVAFGL 542

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DRLV ++  A +I +VI  P
Sbjct: 543 DRLVTMMAKAESIRDVIAFP 562


>gi|126434932|ref|YP_001070623.1| aspartyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|166225365|sp|A3PZ05|SYD_MYCSJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126234732|gb|ABN98132.1| aspartyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 590

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 29/199 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L  R+ + ++ RE    + F+EI++ ++   +P      R 
Sbjct: 118 EARLKYRYLDLRREGPGKALRLRSKVNAAAREVLARHDFVEIETPTMTRSTPEGA---RD 174

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     +Q       Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L
Sbjct: 175 FLVPARLQ---PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQL 231

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + ++     I++    +    + +              IT AEA  R+   
Sbjct: 232 DMEMSFVDADDVIAVSEEILKALWALIGHDLPT----------PLPRITYAEAMRRF-GT 280

Query: 181 DLGTTLDNPDQPDRHLLYL 199
           D        +  +    + 
Sbjct: 281 DKPDLRFGLELVECKEFFA 299



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 36/106 (33%), Gaps = 5/106 (4%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P P+S               +++     E+      +     Q   F     E    ++E
Sbjct: 454 PQPQSEATFDTDPAGALADAYDIVCNGNEIGGGSIRIHRRDVQERVFAMMGIE----HDE 509

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   L   T   P   GIA G+DR+  L+   ++I EVI  P
Sbjct: 510 AQEKFGFLLDAFTFGAPPHGGIAFGWDRITALLARMDSIREVIAFP 555


>gi|153822283|ref|ZP_01974950.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae B33]
 gi|12655821|gb|AAK00611.1| lysyl-tRNA synthetase-like protein [Vibrio cholerae]
 gi|126520179|gb|EAZ77402.1| lysyl-tRNA synthetase, heat inducible [Vibrio cholerae B33]
          Length = 51

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
              D D++  L   +P ++G  +G DRLVML+T  + I +VI  P  +  Q
Sbjct: 1   MFYDADYITALEHGLPPTAGQGIGIDRLVMLLTNTHTIRDVILFPAMRPQQ 51


>gi|330445529|ref|ZP_08309181.1| aspartyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489720|dbj|GAA03678.1| aspartyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 596

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  +N F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDDNAFLDIETPVLTKATPEGARDYLVPSRVHKGNFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    +                      ++  EA  R+   D     +  + 
Sbjct: 244 VRAVTEKMITEMWKEILNVDLGT----------FPIMSFEEAARRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   +             +D    +
Sbjct: 293 VDVADIVKDVDFKVFSGPANDEKGRV 318



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 19/145 (13%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT--KRFELYACN 268
           D +       +     E N   +   +   + +P +       A+P       +++    
Sbjct: 421 DKSAWKPLWVVDFPMFEENEDGSLSAMHHPFTSPLNLTPEELAANPAAALSNAYDMVING 480

Query: 269 IELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
            E+      + +   Q   F+       E + K              L  L    P  +G
Sbjct: 481 YEVGGGSVRIHNSEMQSTVFDILGIDADEQRLKFG----------FLLDALKFGTPPHAG 530

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           +A G DRLVML+ G +NI +VI  P
Sbjct: 531 LAFGLDRLVMLLCGTDNIRDVIAFP 555


>gi|315187478|gb|EFU21234.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 597

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 51/158 (32%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A+  G+      ++  +    + E  E     +    +   P  E         
Sbjct: 415 AVRTAVARTRGLIPEGAFSFCWVVDFPMFEWNEEERKWDPAHHMFTMPREEHLPLLEKDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
                  ++L     EL +    + DP  QR  F+     E +   +           FL
Sbjct: 475 GAVKAAAYDLVCNGYELASGSLRIHDPELQRRIFKVVGFSEAEAASRFG---------FL 525

Query: 311 A-CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   GIA G DRLVM++ G   I EVI  P
Sbjct: 526 TTAFKYGPPPHGGIAPGLDRLVMIMAGEETIREVIAFP 563



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 71/188 (37%), Gaps = 16/188 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDHI 72
              R +  L  R+++    REY V   F EI++ + ++ +P      R F     +    
Sbjct: 143 RRPRMQRNLTLRHLVAWHAREYLVGKGFYEIETPTFIRSTPEGA---RDFLVPARLH--P 197

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG +K F  A  +R+ +     QPEFT ++   +  + + +
Sbjct: 198 GRFYALPQSPQLFKQLLMVAGFDKYFQIARCYRDEDARGDRQPEFTQIDMEMSFVTQDDV 257

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + +   ++    + A     S              +T  EA  RY   D        +  
Sbjct: 258 LAETEGLMAHIFQKALGVDLS---------LPFPRLTYEEALDRY-GTDKPDLRYGLELK 307

Query: 193 DRHLLYLQ 200
           D  L   +
Sbjct: 308 DFTLHVDK 315


>gi|301301178|ref|ZP_07207334.1| aspartate--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300851177|gb|EFK78905.1| aspartate--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 590

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +    +  +  +    L E  E              P  E          
Sbjct: 408 LRVAIAKEMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPH 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K+K           F+  L  
Sbjct: 468 KCHAQSYDIVLNGYELGGGSIRIHRRDIQEAMFKALGFTKEK----AEEQFGWFMDALDF 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   G+A+G DR  ML+ G +NI EVI  P
Sbjct: 524 GFPPHGGLALGLDRFAMLLAGKDNIREVIAFP 555



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 18/191 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ RN I  ++  Y  EN F++I++  L   +P     ++            
Sbjct: 134 RRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDYLVPSRVYPGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 194 LPQ------SPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQPEFTQIDIETSFMSAEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++         K    + ++ +  +  + IT  EA  R+   D        + 
Sbjct: 248 IQEMTEGLL---------KRVMKETLDVDIKTPIQRITWNEAMDRF-GSDKPDIRFGMEL 297

Query: 192 PDRHLLYLQAQ 202
            D       A 
Sbjct: 298 KDMSSAVQNAD 308


>gi|227890855|ref|ZP_04008660.1| aspartyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867264|gb|EEJ74685.1| aspartyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 590

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +    +  +  +    L E  E              P  E          
Sbjct: 408 LRVAIAKEMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPH 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K+K           F+  L  
Sbjct: 468 KCHAQSYDIVLNGYELGGGSIRIHRRDIQEAMFKALGFTKEK----AEEQFGWFMDALDF 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   G+A+G DR  ML+ G +NI EVI  P
Sbjct: 524 GFPPHGGLALGLDRFAMLLAGKDNIREVIAFP 555



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 71/182 (39%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ RN I  ++  Y  EN F++I++  L   +P     ++            
Sbjct: 134 RRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDYLVPSRVYPGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 194 LPQ------SPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQPEFTQIDIETSFMSAEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++         K    + ++ +  +  + IT  EA  R+   D        + 
Sbjct: 248 IQEMTEGLL---------KRVMKETLDVDIKTPIQRITWNEAMDRF-GSDKPDIRFGMEL 297

Query: 192 PD 193
            D
Sbjct: 298 KD 299


>gi|332363919|gb|EGJ41698.1| aspartate--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 578

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 58/180 (32%), Gaps = 9/180 (5%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEP 228
            +  AR+   D    L    +  R    L   +  +  A D     +   +      +  
Sbjct: 374 QDLLARFEAKDGDLILLVMAKKRRAQEALGHLRIELAKALDLIDPSLLHFLWVVDWPLLE 433

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                       +P  +    +        +  +++     E+      + +   Q   F
Sbjct: 434 WNEDQNRYQAMHHPFTQGIFEDGQEPGQFRSHAYDIALNGYEIGGGSLRIHERKAQEAMF 493

Query: 289 EKEMQEKKKIYNETYPIDE-DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E        +  E Y  D   FL  L    P   G+A+G DRLVM++ G  NI +VI  P
Sbjct: 494 E-----LLGMSREDYERDFGFFLEALEYGFPPHGGLALGLDRLVMILAGEENIRQVIAFP 548



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 7/190 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ + S++REY     F+E+++  L   +P      R F     I    
Sbjct: 131 RREKMTQNLKLRHQVTSTIREYLNGLDFLEVETPYLTKSTPEG---ARDFLVPSRIFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E++
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLELSFASEEEI 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   +  +    +      +           +   R+  ++L +  D     
Sbjct: 246 RALVEAMLKAVVKKTHGLELTEDFPTISYEEAMSRFGSDKPDTRF-GLELKSLTDLCQSN 304

Query: 193 DRHLLYLQAQ 202
           D  L+     
Sbjct: 305 DSLLIKKALD 314


>gi|258404152|ref|YP_003196894.1| aspartyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796379|gb|ACV67316.1| aspartyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 602

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 9/135 (6%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYP----APESALANIYPADPRFTKRFELYACNIELC 272
               I    +          +   +P      E   A +        + ++L     E+ 
Sbjct: 436 DLVWITDFPLMEWDDEAQRWVARHHPFTATREEDIAAMLEDPGAVIARSYDLVLNGNEIG 495

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
                +    +Q   F+    ++     E        L  L    P  +GIA G DRL+M
Sbjct: 496 GGSVRIHRSEDQWRMFDALGIDRA----EAEEKFGFLLRALEYGAPPHAGIAFGLDRLIM 551

Query: 332 LVTGANNINEVIWTP 346
           ++ GA +I +VI  P
Sbjct: 552 ILCGAESIRDVIAFP 566



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 22/175 (12%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP     L+ R+    ++R Y  +  F+EI++  L   +P      R F     +    
Sbjct: 149 RRPGLGSNLVVRHKATQAIRNYLDQLDFLEIETPVLTKSTPEG---ARDFLVPSRLN--- 202

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+  G ++ +     +R+ +     QPEFT ++   +    E 
Sbjct: 203 QGEFYALPQSPQLFKQLLMYGGMDRYYQIVRCFRDEDLRADRQPEFTQIDMEMSFAEEED 262

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
           +M     ++                      +    +T AEA  +Y  +D   T 
Sbjct: 263 VMGVAEGLVAEVFAKTLGVDLP---------NPVPRMTYAEAVDKY-GLDRPDTR 307


>gi|221481145|gb|EEE19550.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 1170

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 84/268 (31%), Gaps = 66/268 (24%)

Query: 149  QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ-------- 200
            +   S+Q    N       +T+ EA   Y  I            +      +        
Sbjct: 901  ESRISWQGHEINLSGPWRRMTMVEALHEYTGIHFERLSHQEALLEVERRLQECPEKEGQE 960

Query: 201  ------------------------AQQAGIRVAHDDTWSDIFSRILIEKIEP-NLGINCC 235
                                    A+Q+  +       + +   +     E     +   
Sbjct: 961  HRSSISPSPLSLDGKGEDKRKVTRAKQSCGKTLPPACLTSVEELMDFTFKEWVESRLTQP 1020

Query: 236  TILDRYPAPESALANIYPADPRF---TKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
            T +   P   S LA     +       +RFE Y   +EL +   EL DP+EQ  RF  + 
Sbjct: 1021 THIIHTPLALSPLAAEKLPEEGKFPVAERFETYIAGMELADGYSELTDPLEQLRRFHSQQ 1080

Query: 293  QEKKKIY------------------------NETYPID-----EDFLACLT-EMPQSSGI 322
            +  K                            E    D     ++F++ L   +P ++G+
Sbjct: 1081 RIAKGTDTPATGPGRTTPETLEANNQAEARSQEEAKADGAVPNQEFVSALMLGLPPTAGL 1140

Query: 323  AMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +G DRLVML+T +  I +V+  P  +S
Sbjct: 1141 GIGLDRLVMLLTDSAFIRDVVHMPLRKS 1168



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 57  THIRAFSTELIIQDHIRKPLYLQTSPEFSCKK-LLAAGEEKIFCFAHAWRNGEQGCLHQP 115
              R F + L     +  P++L+ +PE + K+ +++   +K+F     +RN      HQP
Sbjct: 741 PTARLFESHLH---ALDLPVHLRIAPELALKRLVVSGVSDKVFEIGRCFRNEGISWRHQP 797

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
           EF  +E Y    +YE +M     I+R  A 
Sbjct: 798 EFLSMEAYATFWTYEDMMTLTEEIVRLCAC 827



 Score = 53.1 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 11/65 (16%)

Query: 1   MHQIPSQPWWNRDFHY----RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNE 56
           +  +PS     RD       R R  L  R+ I  ++RE  +   F+E+D+  L       
Sbjct: 617 LRSLPSP---QRDAQILCSGRLREILRLRSFIIQTVREKLLSEAFLEVDTAVLH----GA 669

Query: 57  THIRA 61
            H RA
Sbjct: 670 PHARA 674


>gi|218780598|ref|YP_002431916.1| aspartyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|226736533|sp|B8FKS6|SYD_DESAA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218761982|gb|ACL04448.1| Aspartyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 597

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++ G+   ++  +  +    L+E  E +            P  E         
Sbjct: 415 HLRNRVAKELGLIDENEFRFVWVTEFPLVEYDETDKRYVALHHPFTAPMEEDLDLLESDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
               ++ +++     EL      +  P  Q   F            E        L  L 
Sbjct: 475 GAVRSRAYDMVLNGTELGGGSIRIHQPEMQEKVF----NMLGLGQEEAEEKFGFLLKALA 530

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A GFDRL+ML++G N+I ++I  P
Sbjct: 531 FGAPPHGGLAFGFDRLIMLLSGENSIRDIIPFP 563



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 70/182 (38%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R    ++ R+ + + +R +  EN+F++I++  L   +P     ++        +   
Sbjct: 141 RRPRIAKNIMLRHQVGACVRAFLNENEFLDIETPVLTKSTPEGARDYLVPSRVNTGLFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQLFKQLLMVAGYDRYYQIVRCFRDEDLRADRQPEFTQIDLEMSFVGEED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +I    +    K            +  + +T  +A  RY  +D      + + 
Sbjct: 255 VMGIAEQMIAKVFKDVMGKEVK---------TPFDRLTYKDAMDRY-GLDKPDLRFDLEL 304

Query: 192 PD 193
            +
Sbjct: 305 KE 306


>gi|116620658|ref|YP_822814.1| aspartyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|116223820|gb|ABJ82529.1| aspartyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 591

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 84/248 (33%), Gaps = 26/248 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  ++ R+ I  ++RE+     F+EI++  +   +P     ++     +      
Sbjct: 146 RRPQMQRNVIMRSQISFAVREFLYSEGFLEIETPFMTRSTPEGARDYLVPSRVQPGTFYA 205

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G EK F     +R+ +     QPEFT ++   +     Q
Sbjct: 206 LPQ------SPQIFKQLLMISGFEKYFQIVRCFRDEDLRADRQPEFTQIDLEMSFPQQAQ 259

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I+   +VA            +  +    IT AEA   Y  ID   T   P  
Sbjct: 260 IFAVIEPLIQKVCKVAG----------FDVPATFPRITYAEAMRNY-GIDKPDTRIPPMH 308

Query: 192 PDRHLLYLQAQQ-------AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
           P   L+   A                         + + ++    +  +   +   YP  
Sbjct: 309 PVGDLMPELANLGLPLVAIHIPACGTPSRKERDEFKAVGQEKGLRVYDDPKRLERDYPEQ 368

Query: 245 ESALANIY 252
            + +    
Sbjct: 369 MAKVRERC 376



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 44/127 (34%), Gaps = 6/127 (4%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +     E N  +            +  L    PA  R  K ++L    +EL +    +  
Sbjct: 440 MFEWNEEDNRWVAAHHPFTSVHDEDIDLLTADPAKCR-AKSYDLVLNGVELGSGSIRIHR 498

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
              Q   F           +E        L  L    P   GIA+G DRLVM++ G  +I
Sbjct: 499 RDVQAKVF----AAVGFSDDEARRRFGYLLEALEYGAPPHGGIALGLDRLVMILAGETSI 554

Query: 340 NEVIWTP 346
            EVI  P
Sbjct: 555 REVIPFP 561


>gi|325130764|gb|EGC53499.1| aspartyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 586

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 66/207 (31%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPVMQRNLRLRYQVAMGVRRYLDAQGFIDIETPMLTRSTPEGARDYLVPSRVHPGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLNEDE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M                    F++       +   +  AEA   Y   D      N   
Sbjct: 245 IMDITE----------GMAKQVFKDALNVDLGDFPRMPYAEAMF-YYGSDKPDMRINLKF 293

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   L    +    R A D     + 
Sbjct: 294 TELTDLMKTEEFKVFRGAADMKGGRVV 320



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 45/174 (25%), Gaps = 5/174 (2%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E          +   D    ++      R  + L+  +       +     +    + E 
Sbjct: 387 ERTGAQNGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEY 446

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E              P        +        + +++     E+      +     Q 
Sbjct: 447 DEEADRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQE 506

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANN 338
             F       K    E        L  L    P   G+A G DRLV L+TGA +
Sbjct: 507 KVF----AALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAES 556


>gi|71892229|ref|YP_277962.1| aspartyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|97196544|sp|Q492L1|SYD_BLOPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71796335|gb|AAZ41086.1| aspartyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 574

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 13/144 (9%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           +  D           + K   +        +   P                ++ +++   
Sbjct: 425 IKKDSWAPLWIIDFPMFKKNCHGEYTSMHHMFTSPKNCDVQMLKKDPLLVISEAYDMVIN 484

Query: 268 NIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
             E+ +    +     Q+  F      +  +KKK           F+  L    P  +G+
Sbjct: 485 GCEIGSGSARIHSFDMQQAVFNILGITQNDQKKKFG--------YFMDALKYGAPPHAGL 536

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DR+ ML+TG+ NI EVI  P
Sbjct: 537 AFGLDRIAMLLTGSKNIREVIAFP 560



 Score = 92.4 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 70/196 (35%), Gaps = 14/196 (7%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RR  +      R+ I S +  +     F+ I++  L   +P     +I            
Sbjct: 131 RRSIMFDRIKTRSRIMSIVHRFMELEGFLNIETPMLTKVTPEGSRDYIVPSRLHAGKNYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 191 LPQ------SPQIFKQLLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFMTTQK 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +     IR                +   +SE      ++A      I++       + 
Sbjct: 245 IRELMEIFIRIIWREI--LNVELGVFSQFTYSEVMQRFGSDAPDLRNPIEMFDVSYLFNS 302

Query: 192 PDRHLLYLQAQQAGIR 207
               L +++A   G++
Sbjct: 303 TQNRLSFIRANNIGVQ 318


>gi|238028612|ref|YP_002912843.1| aspartyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877806|gb|ACR30139.1| Aspartyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 599

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEVRKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR             +                +   R   ++     D    
Sbjct: 247 IRDLFEEMIRHVFHKTIGVELGAKFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSAPANTKDGRVA 323



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  + +            P  E              K +
Sbjct: 424 KANGLVESGWKPLWVIDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIFQEDVQSKVF----RALKIGPEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR++ ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIITMMAGADSIRDVIAFPKTQRAQD 571


>gi|255534114|ref|YP_003094486.1| aspartyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255347098|gb|ACU06424.1| aspartyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 581

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 75/233 (32%), Gaps = 14/233 (6%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  ++ R+ I  ++R Y     FIE+++  L   +P      R F     +   
Sbjct: 131 LRRNPVRNNMIIRHKIAQAVRRYLDGLDFIEVETPVLIKSTPEG---ARDFVVPSRMNAG 187

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E
Sbjct: 188 ---EFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFIEQE 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE---AFARYANIDLGTTLD 187
            ++     +IR   +                 +   Y +         ++  ++      
Sbjct: 245 DILNTFEGLIRTLFKEIKGIDLPEVPRMQYADAMRLYGSDKPDTRFDMQFVELNHLVKGK 304

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           +    D   L +     G          ++   I   ++     I      D 
Sbjct: 305 DFPVFDHAELVIGINAKGCASYTRKQVDELTDFIKRPQVGATGLIYLRHNEDG 357



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R  +  +   +    L+E  E     +        P PE  +      
Sbjct: 403 ELRLEMGNRLGLRDKNVFSALWVLDFPLLEWDEETERYHAMHHPFTSPKPEDIVLLDTKP 462

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     E+      + D   Q   F      K   +   E        +  
Sbjct: 463 AEVRANAYDMVINGTEVGGGSIRIHDRALQALMF------KHLGFSTEEAQKQFGFLMDA 516

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P   GIA GFDRL  +  G ++I +VI  P
Sbjct: 517 FEFGAPPHGGIAFGFDRLCSIFAGLDSIRDVIAFP 551


>gi|59711556|ref|YP_204332.1| aspartyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|81310972|sp|Q5E6A2|SYD_VIBF1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|59479657|gb|AAW85444.1| aspartyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 591

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  EN F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSQE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +                      +  +EA  R+   D     +  + 
Sbjct: 244 VRNVTERLVHDMWKELLDVELGQ----------FPVMPFSEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLVKDVDFKVFSGPANDEKGRV 318



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 47/144 (32%), Gaps = 6/144 (4%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +     W+ ++        E   G ++        P   SA           +  ++
Sbjct: 416 DLELTDTSAWAPLWVVDFPMFEEDGEGNLHAMHHPFTSPLGVSAEELQANPAVANSDAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
           +     E+      + +   Q   F     E K    E        L  L    P  +G+
Sbjct: 476 MVINGYEVGGGSVRIHNAEMQTAVFGILGIEAK----EQQEKFGFLLEALKYGTPPHAGL 531

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DRL ML+ G  NI +VI  P
Sbjct: 532 AFGLDRLAMLLCGTENIRDVIAFP 555


>gi|85084624|ref|XP_957348.1| asparaginyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28918438|gb|EAA28112.1| asparaginyl-tRNA synthetase [Neurospora crassa OR74A]
          Length = 580

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 107/349 (30%), Gaps = 38/349 (10%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
            + ++    R  +      +  R  ++ +  + + E +F ++   ++      G  T   
Sbjct: 259 MLDNRHLVLRGENAS--ALMKLREFVELAFVDTYRELEFRKVSPPAMVQTQVEGGST--- 313

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   D+  +  YL  S +    + + A   +++C   ++R  +     H  E+T 
Sbjct: 314 -----LFKYDYYGEEAYLTQSSQLYL-ETVLASMGQVYCIEKSFRAEKSLTRRHLSEYTH 367

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E       +  L+     II    +       +   +              E F R   
Sbjct: 368 VEAELDFIEFNDLLDHLEEIISKVVDRVLNNETAAGYLKVLN----PDFKKPEKFLRMKY 423

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            D    L+  D P  +              +   + D  +     ++     IN   +L 
Sbjct: 424 EDAIEWLNKQDPPILN-----------EEGNPHVFGDDIAEAAERRM--TDIINRPILLT 470

Query: 240 RYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
            +P    +      P D R T+  ++    +         +D  ++      E  +K  I
Sbjct: 471 HFPVEIKAFYMKKDPNDLRVTESVDVLMPGVGEIVGGSMRMDDYDEL----IEAYKKNHI 526

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +E Y    D            G  +G +R +  +   +++      P 
Sbjct: 527 GHEPYFWYTD--QRKYGTSPHGGYGLGLERFLAWMANQHSVRTTCLYPR 573


>gi|317488832|ref|ZP_07947363.1| aspartyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316912061|gb|EFV33639.1| aspartyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 592

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 8/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                   L  R+ +  ++R    E  F+E+++  L   +P      R +          
Sbjct: 143 RRPEMFEALHLRHKVAQAMRGALNERGFLEVETPILANSTPEG---ARDYIVPSRPN--P 197

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT ++        E +
Sbjct: 198 GRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQPEFTQVDIEMGFVQGEDV 257

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M    +++         +      +    + E       +       ++L    D     
Sbjct: 258 MNLMEDVMAETLAAVGVEH--AFPLERMQYRESMDRFGNDRPDTRFGMELVDITDIVKNT 315

Query: 193 DRHLLYLQAQQAGI 206
              +    AQ  G+
Sbjct: 316 GFKVFSSVAQSGGV 329



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 44/145 (30%), Gaps = 5/145 (3%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
                  + +  + +  E             +   E             +  ++L     
Sbjct: 430 EGHQLLWVVNFPMFKYDEDEKKYAAEHHPFTHVLDEDVDKIESDPLACGSYSYDLVMDGF 489

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDR 328
           E+      + +  EQR               E        +  L    P   GIA+G DR
Sbjct: 490 EVGGGTIRIHNADEQRAVLRTCGLT----DEEIEEKFGHLIHALELGAPPHGGIALGLDR 545

Query: 329 LVMLVTGANNINEVIWTPFSQSNQE 353
           LVML+ G  +I +VI  P + S  +
Sbjct: 546 LVMLLGGKASIRDVIAFPKTSSASD 570


>gi|213964056|ref|ZP_03392298.1| aspartyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953282|gb|EEB64622.1| aspartyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 584

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 73/224 (32%), Gaps = 27/224 (12%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+ +   +R Y  E  FIE+++  L   +P      R F     +        Y
Sbjct: 138 RDNLIFRHKVGIMVRNYLSEQGFIEVETPVLIKSTPEG---ARDFVVPSRMN---PGEFY 191

Query: 78  -LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   + L+  G +K F     +R+ +     QPEFT ++   +    E ++   
Sbjct: 192 ALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDVISTF 251

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGTTLDN 188
             + +   +                F     +T AEA   Y          +  G   D 
Sbjct: 252 EGLAKHLLKELKGL----------DFGAFPRMTYAEAMKTYGNDKPDIRFGMKFGELNDL 301

Query: 189 PDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLG 231
               D  +        GI V   +         ++     P +G
Sbjct: 302 AQHRDFKVFNEAELVVGIAVPGANSYTRKEIDALVEWVKRPQVG 345



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 48/158 (30%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R   +     +    L+E  E              P PE         
Sbjct: 404 ALRMELAERLGLRKPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                  ++L     E+      + +   Q   FE      ++ Q +       +     
Sbjct: 464 GAVRANAYDLVLNGNEVGGGSIRIFNQELQAKMFELLGFTPEQAQAQFGFLMNAFK---- 519

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   G+A GFDRLV L+ G   I + I  P
Sbjct: 520 -----YGAPPHGGLAFGFDRLVALLGGQETIRDFIAFP 552


>gi|90961830|ref|YP_535746.1| aspartyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|123269933|sp|Q1WTU9|SYD_LACS1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|90821024|gb|ABD99663.1| Aspartyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 590

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +    +  +  +    L E  E              P  E          
Sbjct: 408 LRVAIAKEMDMINKDEFAFIWVVDWPLFEYSEEFDRYIAAHHPFTMPNEEDLDLLETDPH 467

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K+K           F+  L  
Sbjct: 468 KCHAQSYDIVLNGYELGGGSIRIHRRDIQEAMFKALGFTKEK----AEEQFGWFMDALDF 523

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P   G+A+G DR  ML+ G +NI EVI  P
Sbjct: 524 GFPPHGGLALGLDRFAMLLAGKDNIREVIAFP 555



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 71/182 (39%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ RN I  ++  Y  EN F++I++  L   +P     ++            
Sbjct: 134 RRPEMQKALMIRNRITQTVHSYLDENHFLDIETPYLTRSTPEGARDYLVPSRVYPGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  S E+
Sbjct: 194 LPQ------SPQLFKQLLMGAGYDRYYQIARCFRDEDLRGDRQPEFTQIDIETSFMSAEE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++         K    + ++ +  +  + IT  EA  R+   D        + 
Sbjct: 248 IQEMTEGLL---------KRVMKETLDVDIKTPIQRITWNEAMDRF-GSDKPDIRFGMEL 297

Query: 192 PD 193
            D
Sbjct: 298 KD 299


>gi|269218547|ref|ZP_06162401.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211658|gb|EEZ77998.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 595

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 63/171 (36%), Gaps = 16/171 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R+    + R+    + F+E+++ +L   +P      R F     +    
Sbjct: 124 RRAPMQRAIRLRSEASQAARKVLHGHDFVEVETPTLTRSTPEG---ARDFLVPARLN--P 178

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 179 GSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDIEMSFVDQDDV 238

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +    +++R    +             +       IT A+A  RY +    
Sbjct: 239 IAVAEDVLRELWALIG----------YDLEKPIPRITYADAMERYGSDKPD 279



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +            P PE   +     +      +++     E+      +     Q   F
Sbjct: 436 HSAWTAVHHAFTSPKPECLDSFDVDPENALAYAYDIVCNGNEIGGGSIRIHRRDVQERVF 495

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +           E        L       P   GIA G+DR+V L+T A +I +VI  P
Sbjct: 496 KVMGISAA----EAQEKFGFLLDAFKFGAPPHGGIAFGWDRIVSLLTDAPSIRDVIAFP 550


>gi|170759107|ref|YP_001788374.1| aspartyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree]
 gi|238688786|sp|B1L096|SYD_CLOBM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169406096|gb|ACA54507.1| aspartate--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 593

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 66/194 (34%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +   + R+     +R++  EN F+E+++  L   +P     ++          ++
Sbjct: 139 RRPDMQKIFMIRHKTCKVVRDFLDENGFLEMETPILTKSTPEGARDYLVPSR------NY 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G +K F     +R+ +     QPEFT ++   +    + 
Sbjct: 193 KGMFYALPQSPQIFKQLLMVSGYDKYFQITKCFRDEDLRANRQPEFTQIDMELSFIEEDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    ++    +                    E     +   R+  +++    +    
Sbjct: 253 VIELNERLLAKVFKEVAGIDVKLPIERMPYKIAMEKYGSDKPDLRF-GMEINDLTEAVKN 311

Query: 192 PDRHLLYLQAQQAG 205
            +  +     +  G
Sbjct: 312 SEFKVFKGAIEAGG 325



 Score = 89.3 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 44/148 (29%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  I    +  +  I    L+   E                 E              
Sbjct: 417 LAKELDIINKDEFRFVWITEFPLLSYNEEEGRYQAEHHPFTALMDEDVELLDTDPGKVRA 476

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           K +++     EL      + D   Q   F      K+K     +      L       P 
Sbjct: 477 KAYDIVLNGEELGGGSIRIHDSKLQEKMFNVLGFTKEK----AWERFGFLLEAFKFGPPP 532

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A G DR++M + G  NI +VI  P
Sbjct: 533 HGGLAYGLDRMIMFLAGTENIKDVITFP 560


>gi|91786768|ref|YP_547720.1| aspartyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91695993|gb|ABE42822.1| aspartyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 601

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 40/140 (28%), Gaps = 5/140 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                    +    + E  E     +        P                +K +++   
Sbjct: 432 FTAGWKPLWVVDFPMFEFDEEGQRWSAVHHPFTAPKDGHEDWMDTDPGRCISKAYDMVLN 491

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             EL      +     Q   F       K    E        L  L    P   G+A G 
Sbjct: 492 GWELGGGSVRIHRADVQNKVF----NALKIGPEEAQQKFGFLLDALQYGAPPHGGLAFGL 547

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DR+V ++TGA +I +VI  P
Sbjct: 548 DRIVTMMTGAESIRDVIAFP 567



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 64/184 (34%), Gaps = 20/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +    R++   + FI+I++  L   +P     ++            
Sbjct: 137 RRPYMQKNLMLRYRVAMETRKFLDTHGFIDIETPMLTKSTPEGARDYLVPSRVNE----- 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + + 
Sbjct: 192 -GQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFMAEQD 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +I    +                  E   +   +A  RY +   DL   L+  
Sbjct: 251 IRDMFQGMISNIFKTVLDTDLG----------EFPVMAYNDAMHRYGSDKPDLRVNLEFT 300

Query: 190 DQPD 193
           +  D
Sbjct: 301 ELTD 304


>gi|237844525|ref|XP_002371560.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211969224|gb|EEB04420.1| lysyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 1170

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 84/268 (31%), Gaps = 66/268 (24%)

Query: 149  QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ-------- 200
            +   S+Q    N       +T+ EA   Y  I            +      +        
Sbjct: 901  ESRISWQGHEINLSGPWRRMTMVEALHEYTGIHFERLSHQEALLEVERRLQECPEKEGQE 960

Query: 201  ------------------------AQQAGIRVAHDDTWSDIFSRILIEKIEP-NLGINCC 235
                                    A+Q+  +       + +   +     E     +   
Sbjct: 961  HRSSISPSPLSLDGKGEDKRKVTRAKQSCGKALPPACLTSVEELMDFTFKEWVESRLTQP 1020

Query: 236  TILDRYPAPESALANIYPADPRF---TKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
            T +   P   S LA     +       +RFE Y   +EL +   EL DP+EQ  RF  + 
Sbjct: 1021 THIIHTPLALSPLAAEKLPEEGKFPVAERFETYIAGMELADGYSELTDPLEQLRRFHSQQ 1080

Query: 293  QEKKKIY------------------------NETYPID-----EDFLACLT-EMPQSSGI 322
            +  K                            E    D     ++F++ L   +P ++G+
Sbjct: 1081 RIAKGTDTPATGPGRTTPETLEANNQAEARSQEEAKADGAVPNQEFVSALMLGLPPTAGL 1140

Query: 323  AMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +G DRLVML+T +  I +V+  P  +S
Sbjct: 1141 GIGLDRLVMLLTDSAFIRDVVHMPLRKS 1168



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 57  THIRAFSTELIIQDHIRKPLYLQTSPEFSCKK-LLAAGEEKIFCFAHAWRNGEQGCLHQP 115
              R F + L     +  P++L+ +PE + K+ +++   +K+F     +RN      HQP
Sbjct: 741 PTARLFESHLH---ALDLPVHLRIAPELALKRLVVSGVSDKVFEIGRCFRNEGISWRHQP 797

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
           EF  +E Y    +YE +M     I+R  A 
Sbjct: 798 EFLSMEAYATFWTYEDMMTLTEEIVRLCAC 827



 Score = 53.1 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 11/65 (16%)

Query: 1   MHQIPSQPWWNRDFHY----RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNE 56
           +  +PS     RD       R R  L  R+ I  ++RE  +   F+E+D+  L       
Sbjct: 617 LRSLPSP---QRDAQILCSGRLREILRLRSFIIQTVREKLLSEAFLEVDTAVLH----GA 669

Query: 57  THIRA 61
            H RA
Sbjct: 670 PHARA 674


>gi|197336170|ref|YP_002155712.1| aspartyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|238690280|sp|B5FCP9|SYD_VIBFM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|197317660|gb|ACH67107.1| aspartyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 591

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  EN F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSQE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +                      +  +EA  R+   D     +  + 
Sbjct: 244 VRNVTERLVHDMWKELLDVELGQ----------FPVMPFSEAMRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L             +D    +
Sbjct: 293 VDVADLVKDVDFKVFSGPANDEKGRV 318



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 12/147 (8%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +     W+ ++        E   G ++        P   SA           +  ++
Sbjct: 416 DLELTDTSAWAPLWVVDFPMFEEDGEGNLHAMHHPFTSPLGVSAEELQANPAAANSDAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQS 319
           +     E+      + +   Q   F         +  E     E F   L  L    P  
Sbjct: 476 MVINGYEVGGGSVRIHNAEMQTAVFGI-------LGIEAQEQQEKFGFLLEALKYGTPPH 528

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
           +G+A G DRL ML+ G  NI +VI  P
Sbjct: 529 AGLAFGLDRLAMLLCGTENIRDVIAFP 555


>gi|21672582|ref|NP_660649.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|3915068|sp|P81432|SYD_BUCAP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|2947034|gb|AAC05432.1| aspartyl-tRNA synthetase [Buchnera aphidicola]
 gi|21623211|gb|AAM67860.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 584

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 86/262 (32%), Gaps = 31/262 (11%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   + R            L  RN I   +R +     F++I++  L   +P     ++ 
Sbjct: 117 DIRLKYRYLDLRRSELLENLKIRNKITHLIRIFMENKNFLDIETPFLTKSTPEGARDYLV 176

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                    ++      L  SP+   + L+ +G +K +     +R+ +     QPEFT +
Sbjct: 177 PSR------NYPGNFYALPQSPQLFKQILMISGIDKYYQIVKCFRDEDLRSDRQPEFTQI 230

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN- 179
           +   +  S  ++      +I+                     ++   I+  ++  RY + 
Sbjct: 231 DIEASFVSSTKIRNLVETLIKKIWLKV----------INYNLNKFPKISFYDSMKRYGSD 280

Query: 180 -IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             DL   ++  D  D  +    A    I +   +  + +       KI           +
Sbjct: 281 KPDLRNPMEIVDISDIVIEEKVASFFQINLKKKNRIA-LLCFGQGNKISQKKIDEYSNYV 339

Query: 239 DRYPAPESALANIYPADPRFTK 260
            ++ A +     I   + RF  
Sbjct: 340 KKFGAKKLFYIKINKIENRFQD 361



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 63/192 (32%), Gaps = 33/192 (17%)

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +D  T  +   + +     +    A      + +   +  ++  + I           + 
Sbjct: 370 LDKNTLENILRKTNAKNGNILFLLADEEKIVNKSLGMLRIKLGNDFIFFKKNTWKPVWIV 429

Query: 240 RYPAPESALANIYPADPR--------------------FTKRFELYACNIELCNACDELL 279
            +P  +      + ++                       +  ++L     E+      + 
Sbjct: 430 DFPMFKQNSDGKFSSNHHPFTALKKNNQNKLEKNPNLAISDSYDLVINGYEIGGGSVRIH 489

Query: 280 DPIEQRHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVT 334
           D   Q+  F     ++  +++K            +  L    P  +GIA+G DR+VML+T
Sbjct: 490 DAKIQKKVFNIIGIEKQFQREKFG--------FLIEALKYGPPPHAGIALGLDRIVMLLT 541

Query: 335 GANNINEVIWTP 346
             NNI +VI  P
Sbjct: 542 NTNNIRDVIAFP 553


>gi|325860267|ref|ZP_08173391.1| aspartate--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482233|gb|EGC85242.1| aspartate--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 585

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 59/170 (34%), Gaps = 14/170 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
                R  L  R+ +   +R +    QF+E+++  L          R F     +     
Sbjct: 132 RREAVRKNLELRHRMTILIRNFLDAQQFMEVETPVL--IGSTPEGARDFVVPSRMN--PG 187

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
           +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    E ++
Sbjct: 188 QFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQEDVI 247

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
                + R                      + E +T  EA  R+ +    
Sbjct: 248 NLFEEMARHLFREIRG----------IELPKLEQMTWHEAMKRFGSDKPD 287



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 8/137 (5%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
                I   +     E    +            +  L + +P   R  K ++     IE+
Sbjct: 423 KCLWIIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDKHPEQVR-AKAYDFVCNGIEV 481

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL-TEMPQSSGIAMGFDRL 329
                 + D   Q   FE           E       FL        P  +G+A G DR 
Sbjct: 482 GGGSLRIHDTQLQEKMFEVL-----GFTPERAEAQFGFLMNAFKYGAPPHAGLAFGLDRF 536

Query: 330 VMLVTGANNINEVIWTP 346
           V ++ G ++I + I  P
Sbjct: 537 VSILAGLDSIRDCIAFP 553


>gi|258546257|ref|ZP_05706491.1| aspartate--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258518523|gb|EEV87382.1| aspartate--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 439

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 9/128 (7%)

Query: 228 PNLGINCCTILDRYPAPESALANIY--PADPRF--TKRFELYACNIELCNACDELLDPIE 283
                +       +P  +   AN+     +P    ++ +++     E+      +     
Sbjct: 285 EYDEKDGRWYSMHHPFTQPKTANLDELDTNPGDVLSRAYDMVLNGTEIGGGSIRIHRDDM 344

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+  F+           E        L  L    P   GIA G DRL+ML+ GA +I +V
Sbjct: 345 QQRVFKSLGI----GAEEAQEKFGFLLNALKYGCPPHGGIAFGLDRLIMLMAGAKSIRDV 400

Query: 343 IWTPFSQS 350
           +  P +Q+
Sbjct: 401 MAFPKTQT 408



 Score = 78.5 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 42  IEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
           ++I++  L   +P     ++    T       + +      SP+   + L+ +G ++ + 
Sbjct: 1   MDIETPMLTKATPEGARDYLVPSRTHPGKFFALPQ------SPQLFKQMLMMSGFDRYYQ 54

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
               +R+ +     QPEFT L+   +    E +++    +IR   +              
Sbjct: 55  IVRCFRDEDLRADRQPEFTQLDIETSFLEEEDILQIMEPMIRGIFKEHLGVEL------- 107

Query: 160 NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
              +    +T  EA  RYA+ D        +  D   L  
Sbjct: 108 --ANPFPRMTYREAMRRYAS-DKPDLRIPLELVDIDDLVK 144


>gi|227499572|ref|ZP_03929679.1| aspartate--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227218331|gb|EEI83585.1| aspartate--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 582

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 54/161 (33%), Gaps = 14/161 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   + +  +     + +  + E  E              P  E     +   
Sbjct: 406 ALRRKVAKDNNL-IEKEFALCWVVNFPMFEYSEEEDRYVAQHHPFTMPNEEDIDLLLTEP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +   T+ +++     E+      + +   Q   FE     E   K K           F+
Sbjct: 465 EKVRTQAYDIVINGDEMGGGSVRINNSDLQEKVFEALKLSEEDIKNKFG--------FFI 516

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             L    P  +G+A G DRLVML     NI ++I  P +QS
Sbjct: 517 EALQYGTPPHAGLAYGLDRLVMLFAKTENIKDIIAFPKTQS 557



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 65/210 (30%), Gaps = 13/210 (6%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ I  ++REY   N+F E+++  L   +P     ++            + +     
Sbjct: 141 LKLRSDIVRTIREYMYNNEFTEVETPFLTKPTPEGARDYLVPSRINEGKFYALPQ----- 195

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+    ++ F     +R+ +     QPEFT L+   +    + ++     +
Sbjct: 196 -SPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQPEFTQLDMEMSFSDQDDVIAMNEGL 254

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI-----DLGTTLDNPDQPDR 194
           ++   +              +           +   RY        ++    D     D 
Sbjct: 255 LKELFDKYTDYDLKLPIDRMDYSEAINSYGSDKPDLRYGYKIQDVSEIFKDSDFKVFADN 314

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
                  +    +   D+       ++   
Sbjct: 315 TSDGKSVRAINFKAIADNYSRKQLDKLTDF 344


>gi|296280702|gb|ADH04645.1| unknown [Sorangium cellulosum]
          Length = 587

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETH-IRAFSTELIIQD 70
            RR   +  L  R+ +  + R Y  +   +E+++  L   +PG   + +           
Sbjct: 95  LRRTPLQRALRMRHEVNRATRNYLSDQGCLELETPFLVKYTPGGARNFLVPSRVSAGKFY 154

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                  L  SP+   +  + AG ++ F     +R+ +     QPEFT ++   +  + +
Sbjct: 155 A------LAESPQLYKQLFMVAGFDRYFQIVKCFRDEDLRIDRQPEFTQIDVELSFVNQD 208

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            + +    +I        +           P      +  AE+ AR+   D        +
Sbjct: 209 DVFR----LIEGLVFAVFKAALGKDLTELYPTGRFPQMPYAESMARF-GNDKPDLRFGIE 263

Query: 191 QPDRHLLYLQAQQAGIRVA 209
             D   L ++    G+ + 
Sbjct: 264 HTDLTDLIIEHGGGGVPLW 282



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 54/159 (33%), Gaps = 13/159 (8%)

Query: 195 HLLYLQAQQAGI--RVAHDDTWSDIF--SRILIEKIEPNLGINCCTILDRYPAPESALAN 250
            L    A++ G+     H D W  ++  +  L E  E              P  E     
Sbjct: 391 KLRVDIAKKIGLIPEYGHGDQWRFLWVTNPPLFELDEETGRWAAAHHAFTRPIDEHVPLL 450

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED-- 308
                     R++L     EL      L DP  Q   F      +    +E    D+   
Sbjct: 451 EADPARVECYRYDLVLNGFELGGGSIRLHDPDVQARVF------RTLGIDEGDARDKFGF 504

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  L +  P   GIA+G DRL ML+  A  + +VI  P
Sbjct: 505 LLDALRSGAPPHGGIALGMDRLAMLLGSAPTLRDVIPFP 543


>gi|258541467|ref|YP_003186900.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632545|dbj|BAH98520.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635602|dbj|BAI01571.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256638657|dbj|BAI04619.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256641711|dbj|BAI07666.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256644766|dbj|BAI10714.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256647821|dbj|BAI13762.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256650874|dbj|BAI16808.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256653865|dbj|BAI19792.1| aspartyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 595

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 63/206 (30%), Gaps = 28/206 (13%)

Query: 7   QPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGN 55
           + + + +   R R            +  R+ I +S+R    +  F E  +  L   SP  
Sbjct: 118 EHYSD-ELRLRYRYIDLRREQVHANIRLRSAIIASMRRRMTDLGFTEFQTPILTASSPEG 176

Query: 56  ET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQ 114
               +    T       + +      +P+   +  + AG ++ F  A  +R+        
Sbjct: 177 ARDFLVPSRTHAGKFYALPQ------APQQFKQLAMVAGFDRYFQIAPCFRDEASRADRS 230

Query: 115 P-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
           P EF  L++  A  + +++      ++        +             +  E I  A A
Sbjct: 231 PGEFYQLDFEMAFATQDEIFAVLEEVMSGLFTEFGKGR-------AVSTAPFERIPYARA 283

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYL 199
              Y   D     +     D    + 
Sbjct: 284 MKVY-GSDKPDLRNPLLITDVTEDFA 308



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 52/158 (32%), Gaps = 11/158 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +       +  I    + E  E    I+        P       N         
Sbjct: 415 IAEELDLIEKDAFRFCWITDFPMYELNEETGLIDFSHNPFSMPQGGLEALNTKNPLDILA 474

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TE 315
            ++++    IEL +       P      FE         Y E+  ++  F   L      
Sbjct: 475 YQYDIVCNGIELSSGAIRNHLPDVMIRAFEI------AGYPES-EVEARFGGMLNAFRYG 527

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 528 APPHGGSAPGVDRIVMLLADEPNIREVILFPLNQQGED 565


>gi|328871079|gb|EGG19450.1| aspartyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 740

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 72/193 (37%), Gaps = 30/193 (15%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRA 61
           +   R R            +  R+ +  + R++    +F E+++ +L + +P        
Sbjct: 246 EMRLRHRYVDLRRPDVQHNIRLRSRVAMAARDFLTRQKFTEVETPTLFRPTPEGAR---- 301

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              E ++   +    Y L  SP+   + L+  G ++ F  A  +R+ +     QPEFT +
Sbjct: 302 ---EYLVPTRMAGQFYSLPQSPQQYKQLLMVGGMDRYFQLARCYRDEDLRADRQPEFTQI 358

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + + + +    +I      A               +   +++  +A +R+  +
Sbjct: 359 DMEMSFVNVDMVYRIIEGLIVSMWREAGYT----------IQAPFPFLSYKDALSRF-GV 407

Query: 181 DLGTTLDNPDQPD 193
           D   T    +  D
Sbjct: 408 DKPDTRYGLEMRD 420



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 12/112 (10%)

Query: 241 YPAPESAL---ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           +P     L                +++    +EL      + +   Q    E  ++    
Sbjct: 603 HPDDIHHLANGTKPSDFSHIRGLHYDIVLNGVELGGGSIRIHNSALQLKVLEGVLKL--- 659

Query: 298 IYNETYPI--DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              E + +      L  L+   P   GIA+GFDRL+ L+ G+ +I +VI  P
Sbjct: 660 ---EPHLVQRFSHLLNALSLGCPPHGGIALGFDRLMALMVGSPSIRDVIAFP 708


>gi|303256235|ref|ZP_07342251.1| aspartate--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302860964|gb|EFL84039.1| aspartate--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 597

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 66/184 (35%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  +  R     + R +  ++ FI+I++  L   +P     ++            
Sbjct: 131 RRLPMQRNMKLRYKAAMAFRRFLDKHGFIDIETPMLTKSTPEGARDYLVPSRIHDGHFYA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQMLMCAGFDRYYQIVKCFRDEDLRADRQPEFTQVDIETSFLNEVE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +IR   + A         +N +  +    +   +A   Y +   DL   L   
Sbjct: 245 IRALMEELIRAVFKEA---------INVDLPNPFPIMLWTDAMNNYGSDKPDLRVKLKLT 295

Query: 190 DQPD 193
           D  D
Sbjct: 296 DLTD 299



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 52/184 (28%), Gaps = 8/184 (4%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHL--LYLQAQQAGIRVAHDDTWSDIFSRILI 223
           E     +    +   D    + +     R         +  G+          +    + 
Sbjct: 384 ERTGAQDGDVIFFGADRKKIVFDSLGALRLKVGHSEFGKSHGL-FEEGWRPLWVIDFPMF 442

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E       C      P        +   +  F K +++     E+      +     
Sbjct: 443 EYDEEEERWVACHHPFTSPKDGDEDKLVTDPENCFAKAYDMVLNGWEIGGGSIRIHKADV 502

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q   F       K    E        L  L    P   G+A G DR+V ++ GA++I +V
Sbjct: 503 QSKVF----NALKIGPEEARAKFGFLLDVLQYGAPPHGGLAFGLDRIVTMMCGADSIRDV 558

Query: 343 IWTP 346
           I  P
Sbjct: 559 IAFP 562


>gi|302336856|ref|YP_003802062.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301634041|gb|ADK79468.1| aspartyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 594

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 57/204 (27%), Gaps = 5/204 (2%)

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
                +                E +   EA      + +G   +        +     + 
Sbjct: 358 WMKVGESGIEGGVSKFFDGIADELLASLEAQEGDLILMVGDKWNVACTSLGAVRSKLGKD 417

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G+  A    +  I    L E  E          +   P  +                ++
Sbjct: 418 LGLIEAGTFRFCWIVDFPLFEYNEEEQRWEAAHHMFTMPQEQYLDTLEENPGAVKGDLYD 477

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
           L     EL +    + DP  Q+  F       +    E        L       P   GI
Sbjct: 478 LVCNGFELASGSIRIHDPEIQKRIFNIVGFSSE----EAENRFGFLLNAFRYGPPPHGGI 533

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DRLVM++ G N+I EVI  P
Sbjct: 534 APGLDRLVMIMAGENSIKEVIAFP 557



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 71/214 (33%), Gaps = 17/214 (7%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSM-SLQY 51
            I  +     D   + R            +  R  +  + RE+ +   F+EI++   ++ 
Sbjct: 116 MIDEKSDAKEDLRLKYRYLDLRSFSMQRKIRLRTDVTFAAREFLIGKGFMEIETPTMIKS 175

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
           +P      R F     I     K   L  SP+   + L+ +G ++ F  AH +R+ +   
Sbjct: 176 TPEG---ARDFLVPSRIH--AGKFYALPQSPQLYKQILMVSGFDRYFQIAHCFRDEDARG 230

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
             QPE T ++   +  S + + +    ++    +                          
Sbjct: 231 DRQPEHTQIDMEMSFVSKDDVFEVVEGMMSHIFDKTLGVKLEIPFQRLPYDDALNRFGSD 290

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
           +   R+  +++ T  +   +   +       + G
Sbjct: 291 KPDLRF-GLEMKTVDELASKSGFNAFKSVIAEGG 323


>gi|88801547|ref|ZP_01117075.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88782205|gb|EAR13382.1| aspartyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 584

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 78/227 (34%), Gaps = 12/227 (5%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R+Y  + +FIE+++  L   +P      R F     + +  
Sbjct: 133 RRNPVKESLIFRHKVAMEVRKYLSDQEFIEVETPYLIKSTPEG---ARDFVVPSRMNE-- 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDI 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +K    + R   +  N             + +   +   +       ++ G         
Sbjct: 248 LKVFEGLTRHLLKEVN--NVEVAEFPRMLYDDAMRLYGNDKPDIRFGMEFGELNTVTQHK 305

Query: 193 DRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLGINCCTIL 238
           +  +        GI V   +        +++     P +G       
Sbjct: 306 EFSVFNTAELVVGIAVPGGNSYTRKEIDKLIEWVKRPQVGALGMIYC 352



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 43/157 (27%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A + G+R +       +    L+E  E     +        P P          
Sbjct: 404 ALRMELAVRLGLRDSKVFAPLWVVDFPLLELDEETGHYHAMHHPFTSPKPGQMELLDTDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q          +   K +            +
Sbjct: 464 GAVKANAYDLVLNGNEIGGGSIRIHDKQMQATMLRHLGFSDADAKAQFG--------FLM 515

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   G+A G DRLV ++ G   I + I  P
Sbjct: 516 DAFEYGAPPHGGLAFGLDRLVAILGGQETIRDFIAFP 552


>gi|119357451|ref|YP_912095.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|166979740|sp|A1BGZ4|SYD_CHLPD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119354800|gb|ABL65671.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 606

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 71/215 (33%), Gaps = 30/215 (13%)

Query: 2   HQIP----SQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           H +P     +   + +   + R            ++ R+ + +++R Y  E  FIEI + 
Sbjct: 120 HPLPFPVADEVQTSEELRLKYRFIDLRRDKIHENIIFRSRLTAAIRRYLEEKSFIEIQTP 179

Query: 48  SLQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
            L   SP      R F     +     K   L  +P+   + L+ +G  + F  A  +R+
Sbjct: 180 ILTSSSPEG---ARDFLVPSRLH--PGKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRD 234

Query: 107 GEQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
            +      P EF  L+   A    + L +    +        + K               
Sbjct: 235 EDARADRSPGEFYQLDMEMAFIEQDDLFEILEGMFSHLTGSMSTKRI--------REFPF 286

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
             I+  +   RY   D        +  D   L+LQ
Sbjct: 287 PRISFRDVMNRY-GTDKPDLRIPLEISDVTHLFLQ 320



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 50/148 (33%), Gaps = 11/148 (7%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
            +  +  +    + E  E    I+        P  E       P       ++++    I
Sbjct: 435 DELAFCWVVDFPMYEYNEDQKKIDFSHNPFSMPQGEMDALESMPPLNILAYQYDIVCNGI 494

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMG 325
           EL +       P      FE     K+        +D  F   +       P   GIA G
Sbjct: 495 ELSSGAIRNHRPDIMYKAFEIAGYTKE-------DVDSRFGHMIEAFKLGAPPHGGIAPG 547

Query: 326 FDRLVMLVTGANNINEVIWTPFSQSNQE 353
            DRLVM++    NI EVI  P +Q  Q+
Sbjct: 548 LDRLVMILRDEQNIREVIAFPMNQQAQD 575


>gi|221501877|gb|EEE27630.1| aspartyl/lysyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 1170

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 84/268 (31%), Gaps = 66/268 (24%)

Query: 149  QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ-------- 200
            +   S+Q    N       +T+ EA   Y  I            +      +        
Sbjct: 901  ESRISWQGHEINLSGPWRRMTMVEALHEYTGIHFERLSHQEALLEVERRLQECPEKEGQE 960

Query: 201  ------------------------AQQAGIRVAHDDTWSDIFSRILIEKIEP-NLGINCC 235
                                    A+Q+  +       + +   +     E     +   
Sbjct: 961  HRSSISPSPLSLDGKGEDKRKVTRAKQSCGKALPPACLTSVEELMDFTFKEWVESRLTQP 1020

Query: 236  TILDRYPAPESALANIYPADPRF---TKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
            T +   P   S LA     +       +RFE Y   +EL +   EL DP+EQ  RF  + 
Sbjct: 1021 THIIHTPLALSPLAAEKLPEEGKFPVAERFETYIAGMELADGYSELTDPLEQLRRFHSQQ 1080

Query: 293  QEKKKIY------------------------NETYPID-----EDFLACLT-EMPQSSGI 322
            +  K                            E    D     ++F++ L   +P ++G+
Sbjct: 1081 RIAKGTDTPATGPGRTTPETLEANNQAEARSQEEAKADGAVPNQEFVSALMLGLPPTAGL 1140

Query: 323  AMGFDRLVMLVTGANNINEVIWTPFSQS 350
             +G DRLVML+T +  I +V+  P  +S
Sbjct: 1141 GIGLDRLVMLLTDSAFIRDVVHMPLRKS 1168



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 57  THIRAFSTELIIQDHIRKPLYLQTSPEFSCKK-LLAAGEEKIFCFAHAWRNGEQGCLHQP 115
              R F + L     +  P++L+ +PE + K+ +++   +K+F     +RN      HQP
Sbjct: 741 PTARLFESHLH---ALDLPVHLRIAPELALKRLVVSGVSDKVFEIGRCFRNEGISWRHQP 797

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
           EF  +E Y    +YE +M     I+R  A 
Sbjct: 798 EFLSMEAYATFWTYEDMMTLTEEIVRLCAC 827



 Score = 53.1 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 11/65 (16%)

Query: 1   MHQIPSQPWWNRDFHY----RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNE 56
           +  +PS     RD       R R  L  R+ I  ++RE  +   F+E+D+  L       
Sbjct: 617 LRSLPSP---QRDAQILCSGRLREILRLRSFIIQTVREKLLSEAFLEVDTAVLH----GA 669

Query: 57  THIRA 61
            H RA
Sbjct: 670 PHARA 674


>gi|167519184|ref|XP_001743932.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777894|gb|EDQ91510.1| predicted protein [Monosiga brevicollis MX1]
          Length = 624

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 71/199 (35%), Gaps = 33/199 (16%)

Query: 1   MHQIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL- 49
           +H  P       D   R RP           L  R+ + +  R    +N F+E+++ +L 
Sbjct: 161 LHDQP-----LEDTRLRHRPLDLRRAVLQDALRLRHKLSTRFRAALNDNGFLEVETPTLF 215

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           + +PG       F     +         L  SP+   + L+  G ++ + FA  +R+   
Sbjct: 216 KRTPGG---ANEFLVPTQMPGKF---YALVQSPQQYKQMLMVGGIDRYYQFARCYRDEGG 269

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
               QPEFT L+   A     ++M+    +++                  +     E +T
Sbjct: 270 RMDRQPEFTQLDLEMAFAGQAEVMELMEKVVKHVL-----------QDWIDTARPFERLT 318

Query: 170 VAEAFARYANIDLGTTLDN 188
             EA ++Y +       D 
Sbjct: 319 FHEAMSQYGSDKPDRRFDM 337


>gi|329115060|ref|ZP_08243815.1| Aspartyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326695503|gb|EGE47189.1| Aspartyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 595

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 63/206 (30%), Gaps = 28/206 (13%)

Query: 7   QPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGN 55
           + + + +   R R            +  R+ I +S+R    +  F E  +  L   SP  
Sbjct: 118 EHYSD-ELRLRYRYIDLRREQVHANIRLRSAIIASMRRRMTDLGFTEFQTPILTASSPEG 176

Query: 56  ET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQ 114
               +    T       + +      +P+   +  + AG ++ F  A  +R+        
Sbjct: 177 ARDFLVPSRTHAGKFYALPQ------APQQFKQLAMVAGFDRYFQIAPCFRDEASRADRS 230

Query: 115 P-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
           P EF  L++  A  + +++      ++        +             +  E I  A A
Sbjct: 231 PGEFYQLDFEMAFATQDEIFAVLEEVMSGLFTEFGKGR-------AVSTAPFERIPYARA 283

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYL 199
              Y   D     +     D    + 
Sbjct: 284 MKVY-GSDKPDLRNPLLITDVTEDFA 308



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 52/158 (32%), Gaps = 11/158 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +       +  I    + E  E    I+        P       N         
Sbjct: 415 IAEELDLIEKDAFRFCWITDFPMYELNEETGLIDFSHNPFSMPQGGLEALNTKNPLDILA 474

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TE 315
            ++++    IEL +       P      FE         Y E+  ++  F   L      
Sbjct: 475 YQYDIVCNGIELSSGAIRNHLPDVMIRAFEI------AGYPES-EVEARFGGMLNAFRYG 527

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 528 APPHGGSAPGVDRIVMLLADEPNIREVILFPLNQQGED 565


>gi|227495473|ref|ZP_03925789.1| aspartate--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831020|gb|EEH63403.1| aspartate--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 594

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 70/198 (35%), Gaps = 27/198 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R+ +  + R+   +++F+EI++ +L   +P      R 
Sbjct: 126 ETRLRYRYLDLRRSPAQYAIRLRSKVSQAARKVLDQHKFVEIETPTLTRSTPEG---ARD 182

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+
Sbjct: 183 FLVPARLS--PGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLD 240

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + ++    ++++         + +              +T  +A  +Y   D
Sbjct: 241 IEMSFVEQDDVIGVAEDVLKEVWGTIGYDLPT----------PIPRMTFKDAMEKY-GSD 289

Query: 182 LGTTLDNPDQPDRHLLYL 199
                   +  D    + 
Sbjct: 290 KPDLRFGLEIVDLTEYFK 307



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 7/111 (6%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
             + +P     + +  +P       +++     E+      +     Q   F        
Sbjct: 454 HAFTSPNPDWIDNFEENPGEALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFNVMGI--- 510

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L       P   GIA G+DR+V L+T +++I +VI  P
Sbjct: 511 -GPEEAQEKFGFLLDAFKFGAPPHGGIAFGWDRIVSLLTKSDSIRDVIAFP 560


>gi|108799275|ref|YP_639472.1| aspartyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|108769694|gb|ABG08416.1| aspartyl-tRNA synthetase [Mycobacterium sp. MCS]
          Length = 572

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 29/199 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L  R+ + ++ RE    + F+EI++ ++   +P      R 
Sbjct: 100 EARLKYRYLDLRREGPGKALRLRSKVNAAAREVLARHDFVEIETPTMTRSTPEG---ARD 156

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     +Q       Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L
Sbjct: 157 FLVPARLQ---PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQL 213

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + ++     I++    +    + +              IT AEA  R+   
Sbjct: 214 DMEMSFVDADDVIAVSEEILKALWALIGHDLPT----------PLPRITYAEAMHRF-GT 262

Query: 181 DLGTTLDNPDQPDRHLLYL 199
           D        +  +    + 
Sbjct: 263 DKPDLRFGLELVECKEFFA 281



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 36/106 (33%), Gaps = 5/106 (4%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P P+S               +++     E+      +     Q   F     E    ++E
Sbjct: 436 PQPQSEATFDTDPAGALADAYDIVCNGNEIGGGSIRIHRRDVQERVFAMMGIE----HDE 491

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   L   T   P   GIA G+DR+  L+   ++I EVI  P
Sbjct: 492 AQEKFGFLLDAFTFGAPPHGGIAFGWDRITALLARMDSIREVIAFP 537


>gi|295698521|ref|YP_003603176.1| aspartyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157053|gb|ADD79498.1| aspartyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 571

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 75/203 (36%), Gaps = 18/203 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            +      L+ R+ I   + ++  +N+F+ I++  L   + G     +    T+      
Sbjct: 133 RNPDMNKTLVIRSEITHFIHQFMHKNKFVNIETPYLSNPTDGGAKDFLVPSRTKHNHYYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  + ++
Sbjct: 193 ------LAQSPQMFKQILMISGFDRYYQIAKCFRDEDSRSNRQPEFTQLDMEMSFVNSKK 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K     IR   +   +                  IT  +A  +Y   D     +  + 
Sbjct: 247 IKKIIERFIRKLWKKILKYDLPNC---------FPTITFEDAIQKY-GTDKPDLRNPLEL 296

Query: 192 PDRHLLYLQAQQAGIRVAHDDTW 214
            D   L     +   + +++D+ 
Sbjct: 297 VDITYLTSSFDKPKRKFSNEDSC 319



 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 16/158 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    A++  I   +      +    +  K E +  +     +   P            
Sbjct: 408 HLRSKLAKELDISEKNVWKPIWVIDFPM-FKEEKDGCLKPVHHVFTSPKLCDISKLYSNP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
               +  +++     EL +    +     Q   F      E++ + +   + E       
Sbjct: 467 IRTVSDSYDMVINGQELGSGSVRIYKKEIQEKIFQILKINEEDQKNRFGFFLEAMQ---- 522

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  +P  +G A G DR+VML+    NI  VI  P
Sbjct: 523 -----YGVPPHAGFAFGLDRIVMLMLNQKNIKNVIAFP 555


>gi|291518707|emb|CBK73928.1| aspartyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 587

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 57/168 (33%), Gaps = 19/168 (11%)

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
            R LL   A+    +  ++  W  I    + E  E +  +  C      P          
Sbjct: 405 FRKLLGAAAEGHMKKDTYEFCW--IVDFPMYEIGEESGELEFCHNPFSMPQGGMDALKNK 462

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPID 306
                   +++L    +EL +      DP      F      E +++ K           
Sbjct: 463 EPLDILAYQYDLVCNGVELSSGAIRNHDPEIMIEAFKLVGLGEDDVKAKF----PAMY-- 516

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                      P   GIA G DR++ML+ G  +I E+I  P +++ Q+
Sbjct: 517 ----NAFTYGAPPHGGIAPGVDRMIMLIAGEESIREIIPFPMNKNAQD 560



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            +   +  ++ R+ I + LR   + + F+EI +  L   SP     ++            
Sbjct: 134 RNPEVKSKIILRSKIVAELRASMIAHDFMEITTPILTCSSPEGARDYLVPARNHPGKFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+A+G ++ F  A  +R+ +      P EF  L+   A  S E
Sbjct: 194 LPQ------APQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQLDMEMAFASQE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +     +++                 N    +    I   E+  +Y +      +D   
Sbjct: 248 DIFAVVEDVLPPIFAKYG-------VYNTASTAPFVRIPYLESMDKYGSDKPDLRIDLVL 300

Query: 191 QPDRHLLYL 199
           Q    ++  
Sbjct: 301 QDATDVMAD 309


>gi|212693293|ref|ZP_03301421.1| hypothetical protein BACDOR_02804 [Bacteroides dorei DSM 17855]
 gi|237710036|ref|ZP_04540517.1| aspartyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|237725303|ref|ZP_04555784.1| aspartyl-tRNA synthetase [Bacteroides sp. D4]
 gi|265753684|ref|ZP_06089039.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212664171|gb|EEB24743.1| hypothetical protein BACDOR_02804 [Bacteroides dorei DSM 17855]
 gi|229435990|gb|EEO46067.1| aspartyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|229456129|gb|EEO61850.1| aspartyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|263235398|gb|EEZ20922.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 587

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 68/200 (34%), Gaps = 22/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R Y     F+E+++  L   +P      R F     +   
Sbjct: 131 LRRNCVRKNLELRHRMTMEVRRYLDSKGFLEVETPMLVGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +       S              +T A+A  +Y   D          
Sbjct: 246 IISTFEGMAKHLFKELRGVELS---------EPFLRMTWADAM-KYYGSDKPDLRFGMKF 295

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  D
Sbjct: 296 VE---LMDIMKGHGFSVFDD 312



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +Q G+R  ++     +    + E  E    +        +P  E         
Sbjct: 405 ELRLEVGRQLGLRDKNEFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    +E+      + D   Q   FE           E         +   
Sbjct: 465 AAVRADAYDMVVNGVEVGGGSIRIHDSQLQAKMFEIL-----GFTPERAQEQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|158337540|ref|YP_001518715.1| aspartyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189082084|sp|B0CF01|SYD_ACAM1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|158307781|gb|ABW29398.1| aspartyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 595

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 72/194 (37%), Gaps = 8/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
              R    ++ R+ +  S+R Y   +  F++I++  L   +P      R +         
Sbjct: 136 RRDRMHQNIMMRHRLIQSIRRYLEDQQNFVDIETPVLTRSTPEG---ARDYLVPSRAN-- 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +  S E+
Sbjct: 191 PGEWFALPQSPQIFKQLLMVSGFDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMSQEE 250

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++   +++R   +                    E         R+ +++L    D  + 
Sbjct: 251 IIQLNEDLMRHVFKTLKDIDLPKTFPQMTYAEAMERFGTDRPDTRF-DLELVNVSDLLED 309

Query: 192 PDRHLLYLQAQQAG 205
               +     ++ G
Sbjct: 310 SGFKVFSGAIKKGG 323



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 40/145 (27%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
             G  +   D        I    +              +P       +         + +
Sbjct: 421 ALGAEMKLIDPDQIDLLWITEFPMFEWNADEKRLEALHHPFTAPYPEDEADLKTARAQAY 480

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSG 321
           +L    +E+      +     QR  F+           E        L       P   G
Sbjct: 481 DLVYNGLEIGGGSLRIYQADLQRRVFDAIGLS----EEEAQDKFGFLLNAFNFGAPPHGG 536

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DRL ML++G  +I + I  P
Sbjct: 537 IAYGIDRLAMLLSGEESIRDTIAFP 561


>gi|159037436|ref|YP_001536689.1| aspartyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|189082137|sp|A8LXY1|SYD_SALAI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157916271|gb|ABV97698.1| aspartyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 604

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 64/192 (33%), Gaps = 26/192 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   R R            L  R+      R    E  F+EI++ +L   +P      R 
Sbjct: 116 DIRLRYRYLDLRRSGPANALRLRSRANQIARTVLHERDFLEIETPTLTRSTPEG---ARD 172

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F   + +Q        L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+
Sbjct: 173 FLVPVRLQ--PGTWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQPEFTQLD 230

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  + + ++     I+            +              IT  +A ARY   D
Sbjct: 231 IEMSFVTEDDVIDLGEAIVSRLWRQLAGHQIT---------RPIPRITWHDAMARY-GSD 280

Query: 182 LGTTLDNPDQPD 193
                   +  +
Sbjct: 281 KPDLRYGVELTE 292



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 61/159 (38%), Gaps = 17/159 (10%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++A +       +  +    + E++  +       +   + AP +   + +   P  
Sbjct: 407 EIARRANLVDESAWAFCWVVDAPMFERVSDSEEGGWTAVHHPFTAPNAEWVDRFEEAPDR 466

Query: 259 T--KRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFL 310
                +++     E+      +     Q+  F+      ++ ++K     E +       
Sbjct: 467 ALAYAYDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITPEQARDKFGFLLEAFK------ 520

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                 P   GIA+G+DR+ ML+ GA++I EVI  P ++
Sbjct: 521 ---YGPPPHGGIALGWDRICMLLAGADSIREVIAFPKTR 556


>gi|160893491|ref|ZP_02074276.1| hypothetical protein CLOL250_01042 [Clostridium sp. L2-50]
 gi|156864886|gb|EDO58317.1| hypothetical protein CLOL250_01042 [Clostridium sp. L2-50]
          Length = 601

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 52/156 (33%), Gaps = 5/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+Q G+   +   +  I    L+E  +              P  E         
Sbjct: 415 ALRCHLAEQMGLLDKNVFEFVWITEFPLLEWSDEQNRFTAMHHPFTMPMEEDLAIIDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K +++     E+      +     Q   FE     +++     Y      L    
Sbjct: 475 GKVRAKAYDIVLNGNEIGGGSVRIHQDDIQEKMFECLGFTREQ----AYERFGFLLDAFK 530

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +P  +G+A G DRLVML+   ++I +VI  P  +
Sbjct: 531 YGVPPHAGLAYGLDRLVMLMAKQDSIRDVIAFPKVK 566



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 65/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ ++ + +  R++     F+EI++  L + +P     ++            
Sbjct: 141 RRPDLQRNLVMKSKVMTIARQFMANEGFLEIETPMLCKSTPEGARDYLVPSRIHPGTFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + 
Sbjct: 201 LPQ------SPQIYKQLLMCSGYDRYFQIARCFRDEDLRADRQPEFTQMDMELSFVDVDD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++    +            + +       +T  EA  R+   D        + 
Sbjct: 255 VIDVNERLLAKLFKEIL---------DVDVQLPIRRMTWIEAMNRF-GSDKPDLRFGMEL 304

Query: 192 PD 193
            D
Sbjct: 305 KD 306


>gi|300173445|ref|YP_003772611.1| aspartyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887824|emb|CBL91792.1| Aspartyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 588

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ I SS   +  +N FI I++  L   +P     ++            
Sbjct: 133 RRPEMQQNLRIRSKIMSSAMHFMDQNDFINIETPILAKSTPEGARDYLVPSRIFPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A A+R+ +     QPEFT ++   +  S   
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQPEFTQMDIETSFMS--- 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                 + IR       + +           ++   +T  E+  R+   D        + 
Sbjct: 244 -----ADEIRTLVNAWVKTMMHDVVNFDLDTAKIPTLTWQESMDRF-GTDKPDLRIAYEL 297

Query: 192 PD 193
            D
Sbjct: 298 KD 299



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 47/139 (33%), Gaps = 17/139 (12%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR------FTKRFELYACNIEL 271
           F+ I+   +          I   +P       +++  D          + ++L     EL
Sbjct: 426 FAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLDEGEDPHQAHAQSYDLVLNGYEL 485

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM----PQSSGIAMGFD 327
            +    + +   Q    +           E       FL  L  M    P   GIA+G D
Sbjct: 486 GSGSIRIHNMAIQEKMLKAL-----GFTPEAAHEAFGFL--LEGMDFGFPPMGGIALGLD 538

Query: 328 RLVMLVTGANNINEVIWTP 346
           RL ML+ G  NI EVI  P
Sbjct: 539 RLAMLLAGQENIREVIAFP 557


>gi|294786980|ref|ZP_06752234.1| aspartate--tRNA ligase [Parascardovia denticolens F0305]
 gi|315226621|ref|ZP_07868409.1| aspartate--tRNA ligase [Parascardovia denticolens DSM 10105]
 gi|294485813|gb|EFG33447.1| aspartate--tRNA ligase [Parascardovia denticolens F0305]
 gi|315120753|gb|EFT83885.1| aspartate--tRNA ligase [Parascardovia denticolens DSM 10105]
          Length = 598

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 73/193 (37%), Gaps = 21/193 (10%)

Query: 3   QIPSQPWWNRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNE 56
           Q+P +    R  +   RRP     L  R+ +  + R    +  F E+++ +L   +P   
Sbjct: 123 QLPGEDTRLRFRYLDLRRPQMQRNLRLRSNMARAARGELDKLGFTEVETPTLIKSTPEGA 182

Query: 57  THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
              R F     +         L  SP+   + L+ +G E+ +  A  +R+ +     QPE
Sbjct: 183 ---RDFVVPARLS--PGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPE 237

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           FT L+   +    E ++     +++   E A  ++ +              IT  +A  +
Sbjct: 238 FTQLDMEMSFVDQEDVIAMAEQVLKAVWESAGYQVAT----------PFPRITWTDAMNK 287

Query: 177 YANIDLGTTLDNP 189
           Y +        NP
Sbjct: 288 YGSDKPDLRFGNP 300



 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 38/116 (32%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPE--SALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P     +A  + +  DP       +++     E+      +     Q    E  
Sbjct: 453 WTSMHHPFTMPSAAWIDKFDQDPEHAMSDSYDIVCNGNEIGGGSVRIHRDDIQDRVLEVL 512

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                    E        L       P  +GIA G+DR   +++G ++I +VI  P
Sbjct: 513 GI----GEEEARDKFGFLLEAFKYGAPPHAGIAFGWDRCAAILSGEDSIRDVIAFP 564


>gi|269959081|ref|YP_003328870.1| aspartyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848912|gb|ACZ49556.1| aspartyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 592

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 16/165 (9%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           +L R+M+ S LR       FIE+ +  L   SP     +I    T       + +     
Sbjct: 144 ILLRSMVVSELRRAMEALGFIEVHTPILTSSSPEGARDYIVPSRTHAGKFYALPQ----- 198

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQLMKDCMN 138
            +P+   + L+  G +K F  A  +R+ +      P EF  L+   +  +         +
Sbjct: 199 -APQIFKQLLMVGGFDKYFQIAPCFRDEDSRADRSPGEFYQLDMEMSFVT-------QED 250

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +      V       F   +     +   IT  ++  RY +    
Sbjct: 251 VFAAIEPVLYGLFAKFAGADKKVDRQFPRITYRDSMIRYGSDKPD 295



 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 65/186 (34%), Gaps = 18/186 (9%)

Query: 178 ANIDLGTTLDNP-DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI----EKIEPNLGI 232
           A +D G ++    D  D+   +    +  + +       D F    I         +  +
Sbjct: 389 AGVDNGDSVFFMSDTADKAADFAGKIRELLGLELGLIEHDTFKFCWIVDFPYFKCEDGKL 448

Query: 233 NCCTILDRYPA-PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           + C      P     AL    P D     ++++    IE+ +              F   
Sbjct: 449 DFCHNPFSMPQGEMEALEQQNPLDI-IAYQYDIVCNGIEISSGAIRNHRLDVMYKAFSM- 506

Query: 292 MQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  Y+E   ++  F   +       P   G+A G DR+VML+  A NI EVI  P 
Sbjct: 507 -----VGYDE-QTVNSKFGALVRAFKFGAPPHGGLAPGIDRIVMLLADAPNIREVICFPL 560

Query: 348 SQSNQE 353
           +Q+ ++
Sbjct: 561 NQTGED 566


>gi|256391561|ref|YP_003113125.1| aspartyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256357787|gb|ACU71284.1| aspartyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 586

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 68/200 (34%), Gaps = 26/200 (13%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
           N +   + R            L  R+     +R+   E+ F+++++ +L   +P      
Sbjct: 117 NEEMRLKYRYLDIRREPMARALRMRSKATKVIRDVMEEHGFLDVETPTLTRSTPEGA--- 173

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F   + +Q        L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT 
Sbjct: 174 RDFLVPVRLQ--PGTWYALPQSPQLFKQLLMVAGLERYYQIARCYRDEDFRADRQPEFTQ 231

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   +    E +++    I+    +                      +   EA  RY  
Sbjct: 232 LDVEASFVDQEDILRIGEAIVAAVWKETLGVEIP---------LPLPRMKYHEAMDRY-G 281

Query: 180 IDLGTTLDNPDQPDRHLLYL 199
            D        +  +    + 
Sbjct: 282 SDKPDLRFGQELTELTEYFA 301



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYP--APESALANIYPADPRFT--KRFELYAC 267
             +  +    + E IE   G         +P  AP +   + +  DP       +++   
Sbjct: 417 WKFLWVVDFPMFEPIEDAAGEQTGWHAVHHPFTAPTAESLDTFDKDPGSALSNAYDIVLN 476

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             EL      +     Q   F+     ++    E        L       P   GIA G 
Sbjct: 477 GTELGGGSIRIHRKDVQERAFDAIGLSQE----EAQSQFGFLLEAFNYGPPPHGGIAFGL 532

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DRLV L+TGA+ I +V+  P
Sbjct: 533 DRLVALLTGADTIRDVMAFP 552


>gi|222474873|ref|YP_002563288.1| aspartyl-tRNA synthetase (aspS) [Anaplasma marginale str. Florida]
 gi|255002844|ref|ZP_05277808.1| aspartyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|255003976|ref|ZP_05278777.1| aspartyl-tRNA synthetase [Anaplasma marginale str. Virginia]
 gi|254781711|sp|B9KHS0|SYD_ANAMF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|222419009|gb|ACM49032.1| aspartyl-tRNA synthetase (aspS) [Anaplasma marginale str. Florida]
          Length = 592

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 16/165 (9%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           +L R+M+ S LR       FIE+ +  L   SP     +I    T       + +     
Sbjct: 144 ILLRSMVVSELRRAMEALGFIEVHTPILTSSSPEGARDYIVPSRTHAGKFYALPQ----- 198

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQLMKDCMN 138
            +P+   + L+  G +K F  A  +R+ +      P EF  L+   +  +         +
Sbjct: 199 -APQIFKQLLMVGGFDKYFQIAPCFRDEDSRADRSPGEFYQLDMEMSFVT-------QED 250

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +      V       F   +     +   IT  ++  RY +    
Sbjct: 251 VFAAIEPVLYGLFAKFAGADKKVDRQFPRITYRDSMIRYGSDKPD 295



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 50/150 (33%), Gaps = 12/150 (8%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           + HD             K E      C            AL    P D     ++++   
Sbjct: 425 IEHDTFKFCWIVDFPYFKCEDGELDFCHNPFSMPQGEMEALEQQNPLDI-IAYQYDIVCN 483

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIA 323
            IE+ +              F          Y+E   ++  F   +       P   G+A
Sbjct: 484 GIEISSGAIRNHRLDVMYKAFSM------VGYDE-QTVNSKFGALVRAFKFGAPPHGGLA 536

Query: 324 MGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            G DR+VML+  A NI EVI  P +Q+ ++
Sbjct: 537 PGIDRIVMLLADAPNIREVICFPLNQTGED 566


>gi|293602542|ref|ZP_06684988.1| aspartate--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292819304|gb|EFF78339.1| aspartate--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 595

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 8/191 (4%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLL--YLQAQQAGIRVAHDDTWSDIFSRILI 223
           +     +    +   D    +++     R  +      ++ G+          +    + 
Sbjct: 383 KRTGAQDGDIIFFGADREKVVNDAIGALRVKIGHSEFGKKTGL-FEAGWQPLWVVDFPMF 441

Query: 224 EKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           E  E +            P               F K +++     E+      +     
Sbjct: 442 EYDEEDGRYTAAHHPFTSPKDGHEDFLETDPSKAFAKAYDMVLNGWEIGGGSVRIHREEV 501

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q   F    +  K    E        L  L    P   GIA G DR+V ++TGA +I +V
Sbjct: 502 QSKVF----RALKIGAEEAQEKFGYLLVALQYGAPPHGGIAFGLDRIVTMMTGAESIRDV 557

Query: 343 IWTPFSQSNQE 353
           I  P +Q  Q+
Sbjct: 558 IAFPKTQRAQD 568



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 68/197 (34%), Gaps = 9/197 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R  +    R++  +  FI+I++  L   +P     ++            
Sbjct: 130 RRPQMQRNLMLRYRVSIETRKFLDQLGFIDIETPMLAKSTPEGARDYLVPSRVNAGHFFA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 190 LPQ------SPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEFE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +   N+IR   +V      +                  +   R   ++     D    
Sbjct: 244 IREIFENLIRHVFKVVQGVDLASPFPIMPWTEAMRRYGSDKPDLRVK-LEFTDMTDVMRD 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    A   G RV
Sbjct: 303 VDFKVFAAAATAPGSRV 319


>gi|212543427|ref|XP_002151868.1| aspartyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210066775|gb|EEA20868.1| aspartyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 688

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 16/171 (9%)

Query: 194 RHLLYLQAQQAGIRVAHDD----TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
           R  L+ +A +AG++ A          D      I++ EP  G         +P      A
Sbjct: 500 RKALHSEAVKAGVKEAPKGFNFLWVVDFPLFSPIDENEPGQGGTAGLASTHHPFTAPKSA 559

Query: 250 NIYP---ADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                  ADP       ++L    +EL      + D   Q   F   ++       E   
Sbjct: 560 ADVDLMVADPAAVVADHYDLIVNGVELGGGSRRIHDARVQEIVFRDILKMPASRLTE--- 616

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
                L  L    P  +GIA+GFDRL+ ++ G  ++ +VI  P  +S + E
Sbjct: 617 -FSHLLEALKAGCPPHAGIALGFDRLIAIMLGKESVRDVIAFP--KSGKGE 664



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 65/186 (34%), Gaps = 18/186 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFS 63
           +    R      R  L  R+  +   RE        FIEI++  L + +P      R F 
Sbjct: 209 RHLQLRSDRG-LREALRFRSEARKVCREELENMSPPFIEIETPLLFKSTPEG---AREFI 264

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                +        L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+  
Sbjct: 265 VPTRRK---GLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLDLE 321

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E +MK    ++R             Q            +   EA  R+ +    
Sbjct: 322 MSFATGEDVMKSIEKVVRKLWSSLLNIDLGTQ--------PFTRMPYQEAMGRFGSDKPD 373

Query: 184 TTLDNP 189
           T L   
Sbjct: 374 TRLGME 379


>gi|24380186|ref|NP_722141.1| aspartyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|46577481|sp|Q8DSG3|SYD1_STRMU RecName: Full=Aspartyl-tRNA synthetase 1; AltName:
           Full=Aspartate--tRNA ligase 1; Short=AspRS 1
 gi|24378190|gb|AAN59447.1|AE015009_7 putative aspartyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 583

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 69/194 (35%), Gaps = 6/194 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ +  ++R+Y  +  FI++++  L   +P      R F     +    
Sbjct: 131 RREKMTANLKLRHQVTKAIRDYLNQADFIDVETPYLTKSTPEGA---RDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E +
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLEMSFVSEEDV 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   + +     +      +           +   R+A      T  +    
Sbjct: 246 RNLVEGMLKAVVKASKGIELTEAFPIISYAQAMRRFGSDKPDTRFAMELKDLTELSRGNT 305

Query: 193 DRHLLYLQAQQAGI 206
              L     ++ G+
Sbjct: 306 SLFLQKGLKKENGV 319



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 50/149 (33%), Gaps = 7/149 (4%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A+   +       +  +    L+E  E               A E         +   +
Sbjct: 410 LAKDLELIDNDKLNFLWVVDWPLLEWNEDLNRYQAMHHPFTQGAFEDGSDWKENPEKMMS 469

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE-DFLACLT-EMP 317
           + +++     E+      +     Q   FE    +K     E Y  D   FL  L    P
Sbjct: 470 RAYDIVLNGYEIGGGSLRIHKRSAQEAMFELLGMKK-----EDYERDFGFFLEALEYGFP 524

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              G+A+G DRLVM++    NI EVI  P
Sbjct: 525 PHGGLALGLDRLVMILAEEGNIREVIAFP 553


>gi|83319674|ref|YP_424308.1| aspartyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|90110073|sp|Q48979|SYD_MYCCT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83283560|gb|ABC01492.1| aspartyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 575

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 56/137 (40%), Gaps = 10/137 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R  I   +R Y  +  F+E+++      +P             ++   +
Sbjct: 128 RRQVMQNNLIIRAKINHIIRNYLTDLNFLEVETPYFAKSTPEGAR-------HFLVPSRL 180

Query: 73  RKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            K  +  L  SP+   + L+ +G ++ +     +R+ +     QPEFT L+   +  + E
Sbjct: 181 NKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQPEFTQLDLEMSFATSE 240

Query: 131 QLMKDCMNIIRCAAEVA 147
            +M+   ++I+   +  
Sbjct: 241 DVMQISESLIKKILKEV 257



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A+   +    D     +    L E  E              P  ES        
Sbjct: 397 AIRISLAKMFNLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKEESLADFDTNK 456

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  ++L     E+      + +   Q+  F  +  E  +   E       F+    
Sbjct: 457 KDALACAYDLVMNGFEIGGGSQRITNSEIQQRMF--DAVELNQKQVEANF--GWFMNAYK 512

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P  +GIA G DR+ M++T +N+I +VI  P
Sbjct: 513 YGAPYHAGIAWGLDRISMILTDSNSIRDVIAFP 545


>gi|325521380|gb|EGD00220.1| aspartyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 600

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  + +            P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 64/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +         +                +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHIFKTTIDVALDEKFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANAKDGRVA 323


>gi|213580156|ref|ZP_03361982.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 260

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 19/187 (10%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +     R  L        + +  +D W+ ++       
Sbjct: 52  ERTGAQDGDMIFFGADNKKVVADALGALRLKL-----GKDLSLTDEDKWAPLWVIDFPMF 106

Query: 226 IEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +    G+         P   +A       +      +++     E+      + +   Q
Sbjct: 107 EDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQ 166

Query: 285 RHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
           +  F      E ++++K            L  L    P   G+A G DRL ML+TG +NI
Sbjct: 167 QTVFGILGINEQEQREKFG--------FLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNI 218

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 219 RDVIAFP 225


>gi|282892399|ref|ZP_06300749.1| hypothetical protein pah_c253o018 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497801|gb|EFB40162.1| hypothetical protein pah_c253o018 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 581

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 61/181 (33%), Gaps = 18/181 (9%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-H 58
           + +   + R            L+ R+    + R Y  +  F+EI +  L + +P     +
Sbjct: 113 HEELRLKYRYLDIRRGDVAEKLIVRHKAMLTTRNYLSQRGFLEISTPILGKSTPEGARDY 172

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ AG ++ F  A  +R+ +     QPEFT
Sbjct: 173 LVPSRVHPGSFYALPQ------SPQIFKQLLMVAGMDRYFQIAPCFRDEDLRADRQPEFT 226

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  + + L+     +I+   +              +     E         R+ 
Sbjct: 227 QIDLEMSFATPDILIPIIEGLIQTLFKECCSIEIPSSFETLSHAICMEKYGCDRPDMRFE 286

Query: 179 N 179
            
Sbjct: 287 M 287



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 61/176 (34%), Gaps = 13/176 (7%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                + +Q   HL    A+   +  ++   +  +    L         +         P
Sbjct: 387 ADQKSSTNQALDHLRRRIAKDRNLIPSNTYRFLWVRDFPLFNWNPDEQRLESEHHPFTSP 446

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKI 298
            PE             +  ++L     E+      +     Q+  FEK      + K K 
Sbjct: 447 LPEDLHLLDSDPLKMRSSGYDLVLNGYEVGGGSQRIHSSELQQKIFEKLKLTPEELKTKF 506

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                     FL  L+   P   G+A+G DRLVML+TG +NI +VI  P +Q   +
Sbjct: 507 G--------FFLEALSFGTPPHLGLALGLDRLVMLLTGTDNIRDVIAFPKTQKASD 554


>gi|134296922|ref|YP_001120657.1| aspartyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166225331|sp|A4JHR9|SYD_BURVG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|134140079|gb|ABO55822.1| aspartyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 600

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  + +            P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 64/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +         +                +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHIFKTTIDVELDAKFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANAKDGRVA 323


>gi|254251438|ref|ZP_04944756.1| Aspartyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894047|gb|EAY67927.1| Aspartyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 600

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  + +            P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREDVQSKVF----RALKIGAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 70/184 (38%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMIANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +     ++IR             + ++    ++   +  +EA AR+ +   DL   L+  
Sbjct: 247 IRDLFEDMIRH---------IFKKTIDVELDAKFPVMPYSEAMARFGSDKPDLRVKLEFT 297

Query: 190 DQPD 193
           +  D
Sbjct: 298 ELTD 301


>gi|325684224|gb|EGD26400.1| aspartate--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 614

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++ GI       +  +    L E  E +            P  +          
Sbjct: 411 LRRQTAKETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPH 470

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K++     Y      +  L  
Sbjct: 471 KAHARSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKER----AYEQFGFLMDALDM 526

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A+G DR  ML+ G +NI +VI  P
Sbjct: 527 GFPPHAGLAIGLDRFAMLLAGKDNIRDVIAFP 558



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 64/189 (33%), Gaps = 18/189 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I ++   Y     FI I++  L + +P     ++            
Sbjct: 136 RRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLVPSRVYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQPEFTQIDLETSFMDEEG 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++    +              +       IT  E+  +Y   D   T      
Sbjct: 250 VQEVTEGLLAKVMKDVKG---------IDLQLPLPRITWQESMDKY-GCDKPDTRYEMLI 299

Query: 192 PDRHLLYLQ 200
            D   ++ +
Sbjct: 300 HDLGNVFAK 308


>gi|295106097|emb|CBL03640.1| aspartyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 592

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 49/148 (33%), Gaps = 11/148 (7%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
                  + +  +    E             +   E             +  ++L     
Sbjct: 430 EGHQLLWVVNFPMFRYDEDEKKYAAEHHPFTHVLDEDVDKIESDPLACGSYSYDLVMDGF 489

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMG 325
           E+      + +  EQR            + +E   IDE F   +  L    P   GIA+G
Sbjct: 490 EVGGGTIRIHNADEQRAVLRT-----CGLTDE--EIDEKFGHLIHALELGAPPHGGIALG 542

Query: 326 FDRLVMLVTGANNINEVIWTPFSQSNQE 353
            DRLVML+ G  +I +VI  P + S  +
Sbjct: 543 LDRLVMLLGGKASIRDVIAFPKTSSASD 570



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 8/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                   L  R+ +  ++R    E  F+E+++  L   +P      R +          
Sbjct: 143 RRPEMYQALHLRHTVAQAMRGALNERGFLEVETPILANSTPEG---ARDYIVPSRPN--P 197

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT ++        E +
Sbjct: 198 GRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQPEFTQVDIEMGFVQGEDV 257

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M    +++         +      +    + E       +       ++L    D     
Sbjct: 258 MNLMEDVMAETLAAVGVEH--AFPLQRMQYRESMDRFGNDRPDTRFGMELVDITDIVKDT 315

Query: 193 DRHLLYLQAQQAGI 206
              +    AQ  G+
Sbjct: 316 GFKVFSSVAQSGGV 329


>gi|262283660|ref|ZP_06061425.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260717|gb|EEY79418.1| aspartyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 584

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELGLIDNGKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLSEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|113866482|ref|YP_724971.1| aspartyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123134433|sp|Q0KEG8|SYD_RALEH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|113525258|emb|CAJ91603.1| Aspartyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 602

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 46/152 (30%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A            +    + E  E +            P  E              K +
Sbjct: 425 KANGLFEDTWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGKCLAKAY 484

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F           +E        L  L    P   G
Sbjct: 485 DMVLNGWEMGGGSVRIFRSDIQSKVFRALNI----NDDEARAKFGYLLDALQYGAPPHGG 540

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           +A G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 541 LAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 572



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 70/188 (37%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R++     FI+I++  L + +P     ++            
Sbjct: 134 RRPQMQYNLRLRYKVAMEVRKFLDAQGFIDIETPMLGKSTPEGARDYLVPSRVNPGHFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 194 LPQ------SPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLTEQE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++R   + A         ++ +  +    +   EA AR+ +      +     
Sbjct: 248 IRDLFEDMMRTVFKNA---------IDVDLDARFPVMEFREAMARFGSDKPDLRVKLEFT 298

Query: 192 PDRHLLYL 199
               ++  
Sbjct: 299 ELTEVMKD 306


>gi|268557324|ref|XP_002636651.1| C. briggsae CBR-DRS-2 protein [Caenorhabditis briggsae]
          Length = 599

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 79/209 (37%), Gaps = 26/209 (12%)

Query: 14  FHYRRRPF----------LLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRA 61
              + R            L  R+    +LR++ VE   F+++++ +L + +PG  T    
Sbjct: 137 TRLKYRYIDLRSDKLQRSLRIRSEFVHNLRKFLVEKSGFVDVETPTLFRRTPGGATE--- 193

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F       +H      L  SP+   + L+    ++ F  A  +R+       QPEFT ++
Sbjct: 194 FVVPAPSPNH-GMAYSLPQSPQQFKQLLMVGAIDRYFQIARCYRDEGSKGDRQPEFTQVD 252

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  + E +M+   +++  A   +          +  P S    I+ + A A+Y  ID
Sbjct: 253 VEMSFTTQEGVMQLIEDMVISAWPESL--------NHIKPKSPFPRISYSGAMAKY-GID 303

Query: 182 LGTTLDNPDQPD-RHLLYLQAQQAGIRVA 209
                   +  D +  ++   ++      
Sbjct: 304 KPDMRIPWEIEDVKSGIFNFLKKNDCENW 332



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 21/128 (16%)

Query: 239 DRYP--------APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
             +P              ++         + ++L    +E+      + +   QRH    
Sbjct: 453 THHPFTAPVEKDKEMLFESDNQKLLQITGQHYDLVMNGVEMGGGSVRIENSEIQRHVL-- 510

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN----INEVIWT 345
                K +   T  + E  L  L    P   G A+G DR V ++    N    + +VI  
Sbjct: 511 -----KVLGEPTEEM-EHLLNALSYGAPPHGGFALGLDRFVAMLASDGNPLTPVRDVIAF 564

Query: 346 PFSQSNQE 353
           P +++ ++
Sbjct: 565 PKTKNGKD 572


>gi|307717874|ref|YP_003873406.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531599|gb|ADN01133.1| aspartyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 622

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 50/158 (31%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A+  G+      ++  +    + E  E     +    +   P  E         
Sbjct: 440 AVRTAVARTRGLIPEGAFSFCWVVDFPMFEWNEEEQKWDPAHHMFTMPREEHLPLLEEDP 499

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                  ++L     EL +    + DP  QR  F      E+E   +       +     
Sbjct: 500 GAVKAAAYDLVCNGYELASGSIRIHDPELQRRIFKVVGFSEEEAASRFGFLTTAFK---- 555

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P   GIA G DRLVM++ G   I EVI  P
Sbjct: 556 -----YGPPPHGGIAPGLDRLVMIMAGEETIREVIAFP 588



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 69/182 (37%), Gaps = 16/182 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDHI 72
              R +  L  R+++    REY V   F EI++ + ++ +P      R F     +    
Sbjct: 168 RRPRMQRNLTLRHLVAWHAREYLVGKGFYEIETPTFIRSTPEG---ARDFLVPARLH--P 222

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG +K F  A  +R+ +     QPEFT ++   +  + + +
Sbjct: 223 GRFYALPQSPQLFKQLLMVAGFDKYFQIARCYRDEDARGDRQPEFTQIDMEMSFVTQDDV 282

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           + +   ++    + A     S              +T  EA  RY   D        +  
Sbjct: 283 LAETEGLMAHIFQKALGVDLS---------LPFPRLTYEEALDRY-GTDKPDLRYGLELK 332

Query: 193 DR 194
           D 
Sbjct: 333 DF 334


>gi|258653496|ref|YP_003202652.1| aspartyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258556721|gb|ACV79663.1| aspartyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 599

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 26/191 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L  R  +  + R+   +  F+EI++ +L   +P      R 
Sbjct: 120 ETRLKYRYLDLRRAAPAHALRLRAKVSRAARDVLDDAGFVEIETPTLTRSTPEG---ARD 176

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+
Sbjct: 177 FLVPARL--RPGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLD 234

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + ++     +I     +   +I +              I+  EA  +Y +  
Sbjct: 235 IEMSFVEQDDVIAIGEQVIASLWRLIGHEIST----------PIPRISFREAMDKYGSDK 284

Query: 182 LGTTLDNPDQP 192
                D     
Sbjct: 285 PDLRFDLQLTE 295



 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 17/124 (13%)

Query: 231 GINCCTILDRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF 288
           G     +   + +P+    + +  DP       +++     E+      +     Q   F
Sbjct: 442 GSTWTAVHHAFTSPKPECLDTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRADVQERVF 501

Query: 289 E------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
                  ++ Q K     E +             P   GIA G+DR+VML+  A ++ EV
Sbjct: 502 AVMGLTPEDAQTKFGFLLEAFSF---------GAPPHGGIAFGWDRIVMLLAKATSLREV 552

Query: 343 IWTP 346
           I  P
Sbjct: 553 IAFP 556


>gi|331265544|ref|YP_004325174.1| aspartyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682216|emb|CBY99833.1| aspartyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 587

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  ++A            
Sbjct: 407 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPQADTAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKDLQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 75/233 (32%), Gaps = 37/233 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +      LM+  +  I              +    +       +   +A A Y + 
Sbjct: 236 DLETSF-----LMEQEIQDITEGLIA----RVMKETKGIDVTLPFPRMKYDDAMALYGSD 286

Query: 181 DLGTTLDNPDQPDRHLLY----------LQAQQAGIRVAHDDTWSDIFSRILI 223
              T  D   Q    ++              +   ++ A D+       ++  
Sbjct: 287 KPDTRFDMLLQDLTEIVKGVDFKVFSEAPAVKAIVVKGAADNYSRKDIDKMTE 339


>gi|307595113|ref|YP_003901430.1| tRNA synthetase class II (D K and N) [Vulcanisaeta distributa DSM
           14429]
 gi|307550314|gb|ADN50379.1| tRNA synthetase class II (D K and N) [Vulcanisaeta distributa DSM
           14429]
          Length = 357

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 102/350 (29%), Gaps = 45/350 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           +     W R+  Y+       +  I  +LR++     F E+ +  +   P  +  IR   
Sbjct: 37  LAHSWRWAREDKYKL--VFKVQAEIIDALRDFLNSRGFTEVLAPIIG--PVTDPGIR--G 90

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC----LHQPEFTM 119
            +    D       + +S     K+ +AA   KI+  +   R           H  EF  
Sbjct: 91  AKQATVDFYGMEYKVMSSAILY-KQYMAASLGKIYFLSPNIRFEPNDSVFTGRHLVEFYQ 149

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+      +Y+Q++    ++I    +              N           + F RY +
Sbjct: 150 LDLEVYGATYDQVIDLAEDMIIYVIKRVKDNYGKELETKLNRQLP----DFKKPFRRYTH 205

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
                                  + G +   +        ++L    E          + 
Sbjct: 206 ---------------KEAVELVNELGCKNPPNTEIRWECEKLLSAYHE------NPFFII 244

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR-HRFEKEMQEKKKI 298
            YP    A       DP+       +   +       E +   E+     +   + ++  
Sbjct: 245 DYPK--GARGFYDREDPQRPGILRDFD--MLYPEGFGEAISGAEREYEPIKVIARMREGG 300

Query: 299 YNETYPIDEDFLACLTEMPQ--SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +        +L  L E+    ++G  +G +RL   V G   + E    P
Sbjct: 301 EDPNKY--RWYLEMLRELYPLKTAGFGIGVERLTRYVCGLRAVWEARPYP 348


>gi|104773943|ref|YP_618923.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103423024|emb|CAI97710.1| Aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 614

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++ GI       +  +    L E  E +            P  +          
Sbjct: 411 LRRQTAKETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPH 470

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K++     Y      +  L  
Sbjct: 471 KAHARSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKER----AYEQFGFLMDALDM 526

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A+G DR  ML+ G +NI +VI  P
Sbjct: 527 GFPPHAGLAIGLDRFAMLLAGKDNIRDVIAFP 558



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 64/189 (33%), Gaps = 18/189 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I ++   Y     FI I++  L + +P     ++            
Sbjct: 136 RRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLVPSRVYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQPEFTQIDLETSFMDEEG 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++    +              +       IT  E+  +Y   D   T      
Sbjct: 250 VQEVTEGLLAKVMKDVKG---------IDLQLPLPRITWQESMDKY-GCDKPDTRYEMLI 299

Query: 192 PDRHLLYLQ 200
            D   ++ +
Sbjct: 300 HDLGNVFAK 308


>gi|257066406|ref|YP_003152662.1| aspartyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798286|gb|ACV28941.1| aspartyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 582

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 55/161 (34%), Gaps = 14/161 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   + +  +     + +  + E  E              P  E     +   
Sbjct: 406 ALRRKVAKDNDL-IEKEYALCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDIDLLLTEP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +   T+ +++     E+      + +   Q   FE     +   K K           F+
Sbjct: 465 EKVRTQAYDIVINGDEMGGGSVRINNSDLQEKVFEALKLSDEDIKNKFG--------FFI 516

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             L    P  +G+A G DRLVML    +NI ++I  P +QS
Sbjct: 517 EALQYGTPPHAGLAYGLDRLVMLFAKTDNIKDIIAFPKTQS 557



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 60/174 (34%), Gaps = 18/174 (10%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ I  ++REY   N F E+++  L   +P     ++            + +     
Sbjct: 141 LKLRSDIVRTMREYMYNNDFTEVETPFLTKPTPEGARDYLVPSRINEGKFYALPQ----- 195

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+    ++ F     +R+ +     QPEFT L+   +    + ++     +
Sbjct: 196 -SPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQPEFTQLDLEMSFSDQDDVIAMNEGL 254

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++             +  + +     + +  +EA   Y   D           D
Sbjct: 255 LKELF---------DKYTDYDLKLPIDRMDYSEAITSY-GSDKPDLRYGYKITD 298


>gi|171686828|ref|XP_001908355.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943375|emb|CAP69028.1| unnamed protein product [Podospora anserina S mat+]
          Length = 573

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/352 (13%), Positives = 107/352 (30%), Gaps = 43/352 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
            + ++    R  +      +  R  I+ +  + + E +F ++   ++      G  T   
Sbjct: 251 MLDNRHLVLRGDNAS--AVMKLREAIELAFVDSYREMEFTKVSPPAMVQTQVEGGST--- 305

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L    +  +  YL  S +   + ++ +    ++C   ++R  +     H  E+T 
Sbjct: 306 -----LFGFPYYGEEAYLTQSSQLYLETVIQS-LGNVYCIEKSFRAEKSLTRRHLSEYTH 359

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E       ++ L++    +I    +       S   +        +  +      RYA+
Sbjct: 360 VEAEMDFIEFDDLLEHIEELICRVVDKVLANPTSAAYLKLLN-PGFQKPSRPFMRMRYAD 418

Query: 180 -IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            ID     + P   +                    + D  +     K+     IN    L
Sbjct: 419 AIDWLNAQEEPILNEE--------------GKPHVFGDDIAEAAERKM--TDIINRPIFL 462

Query: 239 DRYPAPE-SALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKK 296
             +P    +      P D R T+  ++    + E+      + D  E          +K 
Sbjct: 463 THFPVEIKAFYMQKDPKDLRVTESVDVLMPGVGEIVGGSMRMFDYEELIE-----AYKKN 517

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            I +E Y     +            G  +G +R +  +   + +      P 
Sbjct: 518 DIGHEPYY---WYTEQRKYGTSPHGGYGLGLERFIAWIANQHTVRTCSLYPR 566


>gi|116513951|ref|YP_812857.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|313123581|ref|YP_004033840.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|116093266|gb|ABJ58419.1| aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|312280144|gb|ADQ60863.1| Aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|325125612|gb|ADY84942.1| Aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 614

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++ GI       +  +    L E  E +            P  +          
Sbjct: 411 LRRQTAKETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPH 470

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K++     Y      +  L  
Sbjct: 471 KAHARSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKER----AYEQFGFLMDALDM 526

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A+G DR  ML+ G +NI +VI  P
Sbjct: 527 GFPPHAGLAIGLDRFAMLLAGKDNIRDVIAFP 558



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 64/189 (33%), Gaps = 18/189 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I ++   Y     FI I++  L + +P     ++            
Sbjct: 136 RRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLVPSRVYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQPEFTQIDLETSFMDEEG 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++    +              +       IT  E+  +Y   D   T      
Sbjct: 250 VQEVTEGLLAKVMKDVKG---------IDLQLPLPRITWQESMDKY-GCDKPDTRYEMLI 299

Query: 192 PDRHLLYLQ 200
            D   ++ +
Sbjct: 300 HDLGNVFAK 308


>gi|171920816|ref|ZP_02931993.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185179069|ref|ZP_02964803.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024310|ref|ZP_02996995.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518649|ref|ZP_03004088.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524467|ref|ZP_03004476.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867682|ref|ZP_03079684.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273687|ref|ZP_03206222.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554563|ref|YP_002284687.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550875|ref|ZP_03771824.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551242|ref|ZP_03772188.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903583|gb|EDT49872.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209066|gb|EDU06109.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018984|gb|EDU57024.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997771|gb|EDU66868.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659659|gb|EDX53039.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660739|gb|EDX53994.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249715|gb|EDY74496.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209542064|gb|ACI60293.1| aspartyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379057|gb|EEH01422.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225380029|gb|EEH02391.1| aspartate--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 578

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 66/184 (35%), Gaps = 22/184 (11%)

Query: 11  NRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQ 69
            RD + R       R+ +  + R Y    +FIE ++  L   +P      R F       
Sbjct: 128 RRDVNLR---TFELRSKVYQTFRNYLHSEEFIETETPILAKPTPEG---ARDFYVPTRT- 180

Query: 70  DHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
               K  Y L  SP+   + L+ AG +K F  A  +R+ +     QPEFT ++   +   
Sbjct: 181 ----KKFYALPQSPQTFKQLLMVAGFQKYFQIAKCFRDEDLRSDRQPEFTQVDIELSFAD 236

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             ++     N+ +             Q +N +  +    ++  +A   Y +       D 
Sbjct: 237 ELEIQTLIENLFKHVF---------KQTINVDLTTPFVRMSYEQAINDYGSDKPDLRFDL 287

Query: 189 PDQP 192
             + 
Sbjct: 288 KLKT 291



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 5/149 (3%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A    ++  +D  +  I    L E  + N            P  E+            
Sbjct: 403 NLASMLNLKKPNDFKFVWIIDWPLYEYDDENQRFVAAHHPFTMPTLETLDTFDIDQKNAK 462

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
            + +++     E+      +++   QR  F+           E        L      +P
Sbjct: 463 GRSYDIVLNGYEVGGGSVRIINQQIQRRMFKSINMS----DEEANLKFGFLLNAFEYGVP 518

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              GIA+G DRL+M++  +  I +V+  P
Sbjct: 519 PHCGIALGLDRLIMILINSEYIRDVVAFP 547


>gi|86146480|ref|ZP_01064803.1| aspartyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85835743|gb|EAQ53878.1| aspartyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 592

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  EN F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSQE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +                      +  +EA  R+   D     +  + 
Sbjct: 244 VRNVTEKLVHDMWKELLDVELGQ----------FPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 46/144 (31%), Gaps = 6/144 (4%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +     W+ ++        E   G ++        P   +A           +  ++
Sbjct: 416 DLELTDKKAWAPLWVVDFPMFEEDGEGNLHAMHHPFTSPLGVNAEELKANPAAANSDAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
           +     E+      +     Q   F     E K    E        L  L    P  +G+
Sbjct: 476 MVINGYEVGGGSVRIHSAEMQTAVFGILGIEAK----EQQEKFGFLLEALKYGTPPHAGL 531

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DRL ML+ G  NI +VI  P
Sbjct: 532 AFGLDRLAMLLCGTENIRDVIAFP 555


>gi|256826890|ref|YP_003150849.1| aspartyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583033|gb|ACU94167.1| aspartyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 592

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 61/190 (32%), Gaps = 19/190 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                   L  R+ +  ++R    +  FIE+++  L   +P     ++            
Sbjct: 143 RRPEMFNALKLRHTVAQAMRAALNKRGFIEVETPILANSTPEGARDYLVPSRPNPGRFYA 202

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  S   
Sbjct: 203 LPQ------SPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQPEFTQVDIEMSFVSESD 256

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   E A                  E +   EA  R+   D        + 
Sbjct: 257 VMDLMEGVFQEVLEAAG----------VEHSFPLERMPWKEAMDRF-GCDRPDVRFGMEL 305

Query: 192 PDRHLLYLQA 201
            D   +    
Sbjct: 306 VDLTDIVANC 315



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 48/155 (30%), Gaps = 8/155 (5%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A    I          +   +     E              P     +          + 
Sbjct: 422 ADLLHIERPGHRLLWIVDFPMFKYDDEAKKYAAEHHPFTMIPQS-DWVKIETDPLACGSY 480

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI-DEDFLACLT-EMPQ 318
            +++     E+      + D   Q+         +  + +E   +     +  L    P 
Sbjct: 481 SYDIVMDGFEMGGGSIRIHDAELQKRVL-----RRCGVADEDMEVKFGHLIHALELGAPP 535

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             GIA+G DRLVML+T  ++I +VI  P + S  +
Sbjct: 536 HGGIALGLDRLVMLLTDKSSIRDVIAFPKTSSAAD 570


>gi|73961347|ref|XP_547457.2| PREDICTED: similar to aspartyl-tRNA synthetase 2 (mitochondrial)
           [Canis familiaris]
          Length = 652

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 8/127 (6%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           + + K E    +         P P          +   ++ ++L     E+      + D
Sbjct: 484 LFLPKEEKPEKLESAHHPFTAPHPSDVQLLYSEPEKVRSQHYDLVLNGNEIGGGSIRIHD 543

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
              QR+   + ++       E   +    L  L    P   GIA+G DRL+ LVTGA +I
Sbjct: 544 AELQRYILAELLK-------EDVKLLSHLLQALEFGAPPHGGIALGLDRLICLVTGAPSI 596

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 597 RDVIAFP 603



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 76/241 (31%), Gaps = 23/241 (9%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F+++++ +L + +PG     + F               L 
Sbjct: 185 LRLRSQMVMKMREYLCNLHGFVDVETPTLFKRTPGGA---KEFVIPSREPGKF---YCLP 238

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 239 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 298

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++           S+ +           +T AEA A Y   D   T       D   ++ 
Sbjct: 299 LQY----------SWPSDKDPVVVPFPSMTFAEALASY-GTDKPDTRFGMKIVDISNVFR 347

Query: 200 QAQ----QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
             +    Q  +        +   S         ++        D +      +      +
Sbjct: 348 NTEVGFLQDALSKPQGTVKAMCISEGAKYLKRKDIESIRKFAADHFNQEVLPIFLKANRN 407

Query: 256 P 256
            
Sbjct: 408 W 408


>gi|255731071|ref|XP_002550460.1| hypothetical protein CTRG_04758 [Candida tropicalis MYA-3404]
 gi|240132417|gb|EER31975.1| hypothetical protein CTRG_04758 [Candida tropicalis MYA-3404]
          Length = 679

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 83/271 (30%), Gaps = 25/271 (9%)

Query: 22  LLKRNMIQSSLREYFV-ENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+     +RE F   + F+EI++  L + +P      R F       +       L 
Sbjct: 179 LRLRSQAAQLIREIFTKNHGFVEIETPLLFKSTPEG---AREFLVPTRSFNKF---YALP 232

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+++G  + F  A  +R+ +     QPEFT ++   +  +    +   +  
Sbjct: 233 QSPQQYKQILMSSGITRYFQIAKCFRDEDLRSDRQPEFTQIDLEMSFINNSDQVGIVVED 292

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSE-----------PEYITVAEAFARYANIDLGTTLDN 188
           +            +++        E              +   +A  +Y  ID      +
Sbjct: 293 VVHNVWNKIGGKPTYKVNQDGYLEEITHEMGTNTLQFNKLNYIDALTKY-GIDKPDLRSS 351

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                    +   +     V         F     +   P    +       +PA    +
Sbjct: 352 LTFTSLEDFFFAKENDEFPVVEISILKQAFKPGAKKYKLPKSFTDD----HNFPARRPYI 407

Query: 249 ANIYPADPRFTKRFELYACNIELC-NACDEL 278
             +   D       +L   N+    NA DE 
Sbjct: 408 WAVNKPDDATIWYKKLMEANVIAPTNAFDET 438



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 10/125 (8%)

Query: 236 TILDRYPAPESALANI----YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P   + + +             + ++L    +E+      + DP  Q++ FE+ 
Sbjct: 539 FESTHHPFTMAKIEDYELLESDPLKVRGEHYDLVINGVEVGGGSRRIHDPDLQQYIFEEI 598

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +Q           +    L  L+   P  +G+A+GFDRL  ++ G+N+I +VI  P +QS
Sbjct: 599 LQISNF-----QELFGHLLKALSMGCPPHAGLALGFDRLCAMLIGSNSIRDVIAFPKNQS 653

Query: 351 NQEEI 355
             + +
Sbjct: 654 GVDPV 658


>gi|195436782|ref|XP_002066334.1| GK18240 [Drosophila willistoni]
 gi|194162419|gb|EDW77320.1| GK18240 [Drosophila willistoni]
          Length = 1078

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 73/196 (37%), Gaps = 19/196 (9%)

Query: 17  RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRK 74
             +  L  R+ +   +REY +    F+E+++ +L + +PG       F        H   
Sbjct: 543 DMQHNLRLRSSVIMKMREYLINYLGFVEVETPTLFRRTPGGAQE---FVVPTRKAGHF-- 597

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
              L  SP+   + L++ G ++ F  A  +R+       QPEFT L+   +  S + +M+
Sbjct: 598 -YSLVQSPQQFKQMLMSGGMDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSRDDIMQ 656

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
                +R +      K+ +              IT  EA  +Y   D   T       + 
Sbjct: 657 LIEETLRYSWPKHLSKLQT----------PFRRITYEEALEKY-GCDKPDTRFGLLLNNV 705

Query: 195 HLLYLQAQQAGIRVAH 210
             +  ++ +   +   
Sbjct: 706 TDIIEKSDEFKEKYDD 721



 Score = 89.3 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 70/242 (28%), Gaps = 16/242 (6%)

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
                F      + +E   +  K  + + +       ++  +            E   + 
Sbjct: 730 RASEAFWNGAARKHYEGLGKDFKGTLFVRKFMYSKDVEERLTKLLGEQVAKEVTEKFDLE 789

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           E    +  I       +     R   +    + G   A           I     E N  
Sbjct: 790 ENDLLFLGIGPKEETRSLLGRIRLDYHEFLVENG--KAKKPHEYRFLWVIDFPLFERNSQ 847

Query: 232 INCCTILDR-----YPAPESALANIYPA-DPRFTKRFELYACNIELCNACDELLDPIEQR 285
            N    +       +P      AN     +   ++ ++L     E+      L D   Q 
Sbjct: 848 TNQLESVHHPFTAPHPEDLDNFANQCDNLESIRSQAYDLVLNGQEVGGGSIRLHDRDMQH 907

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
              ++ ++         +      L+ L    P   GIA+G DRL+ ++  A +I +VI 
Sbjct: 908 FILDQVLKI-------PHEHLSHLLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIA 960

Query: 345 TP 346
            P
Sbjct: 961 FP 962


>gi|225873931|ref|YP_002755390.1| aspartate--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|254781707|sp|C1FAE8|SYD_ACIC5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225793643|gb|ACO33733.1| aspartate--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 610

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 65/207 (31%), Gaps = 20/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +     R+ +  ++R+Y     F E+++  +   +P     ++            
Sbjct: 141 RRPEMQHNFEVRHKVALAVRQYLSGQGFFEVETPFMTRSTPEGARDYLVPSRVHPGEFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++        E 
Sbjct: 201 LPQ------SPQLFKQILMISGMDRYFQIARCFRDEDLRADRQPEFTQIDLEMTFPQQET 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +       +  A E   Q                  +T  +       ID       P  
Sbjct: 255 IFGVVEGFLAAAFEAVGQ----------QITVPFPRMTY-DKAIELYGIDKPDLRLPPMT 303

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
             R +   +  Q+ +++        I 
Sbjct: 304 DVRSVFSDEELQS-LKIEPGMPIVAIV 329



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
               +   ++ G    +   W   F     ++               +     A      
Sbjct: 430 FAAEHKAFEKKGTAADYQFLWVTDFPFFEWDEQSHTWTFAHHPFTSPHQDDLIAGRLESD 489

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLA 311
                   +++     EL +    +     Q+  F      +      +E       FL 
Sbjct: 490 QAAVRALAYDVVLNGTELGSGSIRIHRQDVQQQIF------RALGMSDDEAKERFGFFLE 543

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   GIA+G DR+VM++ GA+++ EVI  P
Sbjct: 544 ALQYGTPPHGGIALGLDRIVMILAGASSLREVIAFP 579


>gi|213854909|ref|ZP_03383149.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 371

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 19/187 (10%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E     +    +   D    + +     R  L        + +  +D W+ ++       
Sbjct: 164 ERTGAQDGDMIFFGADNKKVVADALGALRLKL-----GKDLSLTDEDKWAPLWVIDFPMF 218

Query: 226 IEP-NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
            +    G+         P   +A       +      +++     E+      + +   Q
Sbjct: 219 EDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQ 278

Query: 285 RHRF----EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
           +  F      E ++++K            L  L    P   G+A G DRL ML+TG +NI
Sbjct: 279 QTVFGILGINEQEQREKFG--------FLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNI 330

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 331 RDVIAFP 337


>gi|73540145|ref|YP_294665.1| aspartyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|97196830|sp|Q475W2|SYD_RALEJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|72117558|gb|AAZ59821.1| aspartyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 602

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 45/138 (32%), Gaps = 5/138 (3%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +    + E  E +            P  E              K +++     E+     
Sbjct: 439 VVDFPMFEYDEEDARWVAMHHPFTSPKDEHMQYLETDPGKCIAKAYDMVLNGWEMGGGSV 498

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTG 335
            +     Q   F    +  K    E        L  L    P   G+A G DR+V ++ G
Sbjct: 499 RIYRSDIQSKVF----RALKINDEEARAKFGYLLDALQYGAPPHGGLAFGLDRIVTMMAG 554

Query: 336 ANNINEVIWTPFSQSNQE 353
           A++I +VI  P +Q  Q+
Sbjct: 555 ADSIRDVIAFPKTQRAQD 572



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 74/184 (40%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y     FI+I++  L + +P     ++            
Sbjct: 134 RRPQMQYNLRLRYKVAMEVRKYLDAQGFIDIETPMLGKSTPEGARDYLVPSRVNPGHFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 194 LPQ------SPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLTEQE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +     +++R   + A         ++ +  ++   +   EA AR+ +   DL   L+  
Sbjct: 248 IRDLFEDMMRTVFKNA---------IDVDLDAKFPVMEFREAMARFGSDKPDLRVKLEFT 298

Query: 190 DQPD 193
           +  D
Sbjct: 299 ELTD 302


>gi|302206283|gb|ADL10625.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|308276525|gb|ADO26424.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 600

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 70/212 (33%), Gaps = 12/212 (5%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP     L  R+    + R     + F+EI++ +L   +P      R F     +    
Sbjct: 138 RRPTQGGALRLRSKANQAARRVLDTHDFVEIETPTLTRSTPEG---ARDFLVPARL--KP 192

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E  +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 193 GSWYALPQSPQLFKQLLMVAGMEHYYQIARCYRDEDFRADRQPEFTQLDIEMSFVDQDDV 252

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     I+    ++    I +   +    +++   +  ++      +I +    D     
Sbjct: 253 IALAEEIVSELWKLIGYNIPT--PIPRMTYADAMRLYGSDKPDLRFDIKIVECTDYFKDT 310

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
              +   +   A +                  
Sbjct: 311 TFRVFQNEYVGAVVMEGGASQPRRQLDAWQEW 342



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 23/163 (14%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL-------GINCCTILDR-YPAPESALAN 250
             A++ G+    D  ++ +    L E             G +  T +   + +P+     
Sbjct: 410 EIARKLGLIKDGDWAFTWVVDAPLFESSADATASGDVALGHSKWTAVHHAFTSPKPEWLE 469

Query: 251 IYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYP 304
            +  +P       +++     E+      +     Q   F+     E + ++K       
Sbjct: 470 SFDENPGEATAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFG----- 524

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 525 ---FLLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 564


>gi|167751119|ref|ZP_02423246.1| hypothetical protein EUBSIR_02104 [Eubacterium siraeum DSM 15702]
 gi|167655834|gb|EDR99963.1| hypothetical protein EUBSIR_02104 [Eubacterium siraeum DSM 15702]
 gi|291531791|emb|CBK97376.1| aspartyl-tRNA synthetase [Eubacterium siraeum 70/3]
 gi|291556675|emb|CBL33792.1| aspartyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 589

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 17/168 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
            + R    ++ R+ + S LR    E  F+EI +  L   SP     ++            
Sbjct: 136 RNKRMHNNIVLRSQVISFLRSKMTEMGFLEIQTPILSTSSPEGARDYLIPSRKHHGKFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L++  A  + E
Sbjct: 196 LPQ------APQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMAFATQE 249

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +  +   ++    E    K  S         +  + I  AE+  +Y 
Sbjct: 250 DVFANAEEVLSAVFEKFGGKPVSP--------APFKRIPYAESMLKYG 289



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 52/163 (31%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++  +          I    + E+ E              P            
Sbjct: 407 QIRTEVAKRMDMIDYDRYEMCFIVDFPMYEEDEETGKTIFTHNPFSMPQGGLEALKTKNP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    +EL +      D       FE         Y E   + E F     
Sbjct: 467 LDILAYQYDIVCNGVELSSGAVRNHDLEIMIKAFEI------AGYTE-QDVAEKFGALYN 519

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P  +G+A G DR++ML+TG  +I EVI  P + + Q+
Sbjct: 520 AFQYGAPPHAGMAPGVDRMIMLLTGDESIREVIAFPMNSNAQD 562


>gi|94263255|ref|ZP_01287071.1| GAD:tRNA synthetase, class II (D, K and N) [delta proteobacterium
           MLMS-1]
 gi|93456338|gb|EAT06462.1| GAD:tRNA synthetase, class II (D, K and N) [delta proteobacterium
           MLMS-1]
          Length = 300

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 17/164 (10%)

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
            Q    L    A++  +    D ++  +    L+E                 P  E    
Sbjct: 111 HQALAELRLELARRLELVSREDFSFVWVTDFPLLEYDAEAKRHAAVHHPFTAPREEDLPL 170

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETY 303
                    ++ ++L     E+      +  P  QR  F       +E+++K        
Sbjct: 171 LDSDPGRVRSRAYDLVLNGNEIGGGSIRIHQPDLQRQVFTALGITPEEVKDKFA------ 224

Query: 304 PIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 +  L    P   G+A G DRL+ML+ G ++I +VI  P
Sbjct: 225 ----FLVQALELGAPPHGGMAFGLDRLLMLLAGCDSIRDVIAFP 264


>gi|88658180|ref|YP_507154.1| aspartyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|123722796|sp|Q2GHC9|SYD_EHRCR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|88599637|gb|ABD45106.1| aspartyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 590

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  ++ R+ I S LR+      FIEI +  L   SP     ++            
Sbjct: 135 RRDKVKNNIILRSKIISELRKSMEAMGFIEIQTPILTSSSPEGARDYLVPSRIHHGKFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  S E
Sbjct: 195 LPQ------APQLFKQILMVSGFDKYFQIAPCFRDEDARSDRSPGEFYQLDIEMSFVSQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +      ++       + K             E   I+  +A   Y 
Sbjct: 249 DVFNVIEPVLLNVFSKFSNKTID---------KEFPRISYHDAMLHYG 287



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 55/175 (31%), Gaps = 11/175 (6%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             T D   +    +  L  ++  +       +  I      +  +    IN        P
Sbjct: 398 SETEDKATELAGEVRTLLGKELNLIEKDTFRFCWIIDFPYFKYDKKEKSINFFHNPFSMP 457

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                  N          ++++    IE+ +              F          Y + 
Sbjct: 458 QGGLEALNNQNPLDILAYQYDIVCNGIEISSGAIRNHKLDIMYKAFSI------AGYTKE 511

Query: 303 YPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             +D+ F           P   GIA G DR+VML+  A NI EVI  P +QS ++
Sbjct: 512 M-VDQKFNSLTRAFKFGAPPHGGIAPGIDRMVMLLADATNIREVICFPLNQSGED 565


>gi|189460795|ref|ZP_03009580.1| hypothetical protein BACCOP_01442 [Bacteroides coprocola DSM 17136]
 gi|189432514|gb|EDV01499.1| hypothetical protein BACCOP_01442 [Bacteroides coprocola DSM 17136]
          Length = 585

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 66/199 (33%), Gaps = 20/199 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RR   R  L  R+ +   +R Y     F+E+++  L          R F     +    
Sbjct: 131 LRRTAVRKNLELRHRMTMEVRRYLDSKGFLEVETPML--IGSTPEGARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++    + +   +       +              +  A+A  +Y   D           
Sbjct: 247 IQMFEGMAKHLFKELRGVELT---------EPFIRMPWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDILKGYGFSVFDN 312



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGNQLGLRDKNQFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    +E+      + D   Q   FE           E         +   
Sbjct: 465 AAVRADAYDMVVNGVEVGGGSIRIHDSQLQAKMFEIL-----GFTPEKAQEQFGFLMNAF 519

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KFGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|206559273|ref|YP_002230034.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693095|sp|B4EBD1|SYD_BURCJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|198035311|emb|CAR51186.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 600

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  + +            P  E              K +
Sbjct: 424 KANGLVQAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 70/184 (38%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +     ++IR   +           ++    ++   +  +EA AR+ +   DL   L+  
Sbjct: 247 IRDLFEDMIRHIFKTT---------IDVELDAKFPVMPYSEAMARFGSDKPDLRVQLEFT 297

Query: 190 DQPD 193
           +  D
Sbjct: 298 ELTD 301


>gi|262202244|ref|YP_003273452.1| aspartyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262085591|gb|ACY21559.1| aspartyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 600

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 73/207 (35%), Gaps = 26/207 (12%)

Query: 3   QIPSQPWWNRDFHYR----RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSP 53
           Q+   P       YR    RR      +  R+ + ++ R     + F+EI++ +L   +P
Sbjct: 110 QLDESPGEETRLRYRYLDLRRDAPSAAIRLRSKVNAAARGVLAAHDFVEIETPTLTRSTP 169

Query: 54  GNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
                 R F     +Q       Y L  SP+   + L+ AG E+ +  A  +R+ +    
Sbjct: 170 EGA---RDFLVPARLQ---PGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRAD 223

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
            QPEFT L+   +    + ++     ++    ++   +I +              +T A+
Sbjct: 224 RQPEFTQLDIEMSFVDQDDVIALAEEVVAALWKLIGVEITT----------PIPRMTYAD 273

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYL 199
           A  R+ +                    
Sbjct: 274 AMRRFGSDKPDLRFGIELVECTEFFAD 300



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 36/106 (33%), Gaps = 5/106 (4%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P PES               +++     E+      +     Q   FE         ++E
Sbjct: 454 PKPESVDTLESDPGAALAYAYDIVCNGNEIGGGSIRIHRREIQERVFEIMGI----GHDE 509

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   L       P   GIA G+DR+V L+ G  +I EVI  P
Sbjct: 510 AQEKFGFLLDAFAFGAPPHGGIAFGWDRIVSLLAGEPSIREVIAFP 555


>gi|167464001|ref|ZP_02329090.1| aspartyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 358

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 49/157 (31%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L     ++ G+       ++ +    L+   E              P  E         
Sbjct: 171 NLRLKIGRRLGLIDDSIFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKDEDLDLFDSDP 230

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                + ++L     E+      +     Q   F+     + + K K            L
Sbjct: 231 GQIRGQAYDLVLNGYEVGGGSQRIFKRDVQEKMFKALGFSQEEAKDKFG--------YLL 282

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   GIA GFDRLVML+ G +N+ E I  P
Sbjct: 283 DAFEYGTPPHGGIAFGFDRLVMLLAGRSNLRETIAFP 319


>gi|284931196|gb|ADC31134.1| Aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 582

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 76/256 (29%), Gaps = 23/256 (8%)

Query: 11  NRDFHYR------RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
             +   +      RRP L K    R+     +R +     FIEI++  L   +P      
Sbjct: 119 LEEVRLKYRYLDLRRPVLQKNMKLRSDFFLIVRNFLTSQGFIEIETPILSKTTPEGAR-- 176

Query: 60  RAFSTELIIQDHIRKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
                + ++   +   ++  L  S +   + L+ +G E+ F  +  +R+ +     QPE 
Sbjct: 177 -----DYVVPSRLGPNMFYALPQSAQIYKQLLMISGFERYFQISRCFRDEDLRKDRQPEH 231

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
             ++   +  S EQ  K    +     +           +  +           +   R+
Sbjct: 232 VQIDMEVSFMSKEQFFKLVEAMFIHIFDRLMNVKIEPNFMRMSYDEAMNRFGTDKPDLRF 291

Query: 178 AN--IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
               +D+     + +        L+ +   I +           +++ +  + N      
Sbjct: 292 GCELVDVSAVFVDHEFSVFKQFALKNRLKAIVLDEILISYKEH-KVMEKYAKDNYAKGLS 350

Query: 236 TILDRYPAPESALANI 251
                           
Sbjct: 351 WFSYDQNQIIDGSIKR 366



 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 46/141 (32%), Gaps = 9/141 (6%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
             +  +  I    L E  +          L   P  +                ++L    
Sbjct: 416 EDEYKFLWIVDWPLYEWDDKTNSYQSAHNLFTAPEAKYLSTFNEDKANAKAASYDLVLNG 475

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQSSGIAMG 325
            EL +    + DP  Q+              +E    D+    L       PQ  GI +G
Sbjct: 476 FELGSGAIRITDPSLQK------AVMSSLGLSEAEMNDKFGFLLDAYQYGAPQHCGIGLG 529

Query: 326 FDRLVMLVTGANNINEVIWTP 346
            DRL+M++T + +I +VI  P
Sbjct: 530 SDRLLMILTKSKSIRDVIAFP 550


>gi|302330840|gb|ADL21034.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 599

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 70/212 (33%), Gaps = 12/212 (5%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP     L  R+    + R     + F+EI++ +L   +P      R F     +    
Sbjct: 137 RRPTQGGALRLRSKANQAARRVLDTHDFVEIETPTLTRSTPEG---ARDFLVPARL--KP 191

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E  +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 192 GSWYALPQSPQLFKQLLMVAGMEHYYQIARCYRDEDFRADRQPEFTQLDIEMSFVDQDDV 251

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     I+    ++    I +   +    +++   +  ++      +I +    D     
Sbjct: 252 IALAEEIVSELWKLIGYNIPT--PIPRMTYADAMRLYGSDKPDLRFDIKIVECTDYFKDT 309

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
              +   +   A +                  
Sbjct: 310 TFRVFQNEYVGAVVMEGGASQPRRQLDAWQEW 341



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 23/163 (14%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL-------GINCCTILDR-YPAPESALAN 250
             A++ G+    D  ++ +    L E             G +  T +   + +P+     
Sbjct: 409 EIARKLGLIKDGDWAFTWVVDAPLFESSADATASGDVALGHSKWTAVHHAFTSPKPEWLE 468

Query: 251 IYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYP 304
            +  +P       +++     E+      +     Q   F+     E + ++K       
Sbjct: 469 SFDENPGEATAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFG----- 523

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 524 ---FLLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 563


>gi|148977432|ref|ZP_01814032.1| aspartyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145963384|gb|EDK28649.1| aspartyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 593

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 66/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  EN F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSQE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +                      +  +EA  R+   D     +  + 
Sbjct: 244 VRNITEKLVHDMWKELLDVELGQ----------FPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 50/150 (33%), Gaps = 18/150 (12%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +     W+ ++        E   G ++        P   +A           +  ++
Sbjct: 416 DLELTDTSAWAPLWVVDFPMFEEDGEGNLHAMHHPFTSPLGVTAEELKANPAAANSDAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-TEM 316
           +     E+      + +   Q   F      EKE QEK              L  L    
Sbjct: 476 MVINGYEVGGGSVRIHNAEMQTAVFGILGIEEKEQQEKFG----------FLLDALQYGT 525

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P  +G+A G DRL ML+ G  NI +VI  P
Sbjct: 526 PPHAGLAFGLDRLAMLLCGTENIRDVIAFP 555


>gi|302383320|ref|YP_003819143.1| aspartyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193948|gb|ADL01520.1| aspartyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 593

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 28/205 (13%)

Query: 3   QIP-------SQPWWNRDFHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P        +    +  +   RR  L    + R+ + SS+R+  V   F+E  +  L 
Sbjct: 111 PLPVFGEPEYPEELRLKHRYLDLRRETLHKNIVLRSRVISSIRQRMVGQGFLEYQTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     +        Y L  +P+   + L+ +G ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRLH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                  EF  L+   +  +         ++      V +     F +           I
Sbjct: 225 LRADRSLEFYQLDVEMSFVT-------QEDVFAAIEPVMHGVFEEFADGKSVTPYPFPRI 277

Query: 169 TVAEAFARYANIDLGTTLDNPDQPD 193
              ++ A Y   D   T +     D
Sbjct: 278 PYRDSIAWY-GTDKPDTRNPIKMAD 301



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 46/143 (32%), Gaps = 9/143 (6%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           +  I    + E  +    ++        P  E               ++++     ELC+
Sbjct: 430 FCWIVDFPMFEWSDEEKKVDFSHNPFSMPQGELEALTTKDPLDILAYQYDIVCNGYELCS 489

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQSSGIAMGFDRLV 330
                         FE         Y+ +   D+    L       P   G+A G DR+V
Sbjct: 490 GAIRNHKAEIMLKAFEI------AGYDASVVEDQFGGMLNAFRYGAPPHGGLAPGIDRIV 543

Query: 331 MLVTGANNINEVIWTPFSQSNQE 353
           ML+     I EVI  P +Q  ++
Sbjct: 544 MLLANQVAIREVIAFPLNQQGED 566


>gi|169629949|ref|YP_001703598.1| aspartyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|238688902|sp|B1MCH3|SYD_MYCA9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169241916|emb|CAM62944.1| Aspartyl-tRNA synthetase (AspS) [Mycobacterium abscessus]
          Length = 597

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 70/183 (38%), Gaps = 28/183 (15%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R+   ++ R     ++F+E+++ +L   +P      R 
Sbjct: 118 EARLRYRYLDLRREGPGNAIRLRSKANAAARSVLSGHEFVEVETPTLTRSTPEG---ARD 174

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     +Q       Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L
Sbjct: 175 FLVPARLQ---PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQL 231

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + ++     I+    ++   ++ +            + IT AEA  RY + 
Sbjct: 232 DIEMSFVDQDDVIALAEEILVALWDLVGYRVPT----------PIDRITYAEAMRRYGSD 281

Query: 181 DLG 183
              
Sbjct: 282 KPD 284



 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 34/106 (32%), Gaps = 5/106 (4%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P PES               +++     E+      +     Q   F+           +
Sbjct: 454 PKPESENTFDTDPGSALAYAYDIVCNGHEIGGGSIRIHRRDIQERVFQVMGIS----NED 509

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   L       P   GIA G+DR+  L+ G ++I EVI  P
Sbjct: 510 AQEKFGFLLDAFAFGAPPHGGIAFGWDRVTALLAGTSSIREVIAFP 555


>gi|242786653|ref|XP_002480848.1| aspartyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218720995|gb|EED20414.1| aspartyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 665

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 62/171 (36%), Gaps = 16/171 (9%)

Query: 194 RHLLYLQAQQAGIRVAHDD----TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
           R  L+ +A +AGI+ A          D      I++ EP  G         +P      A
Sbjct: 478 RKALHSEAVKAGIKEAPTGFSFLWVVDFPLFSPIDENEPGQGGTAGLASTHHPFTAPKSA 537

Query: 250 NIYPADPRF-----TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                            ++L    +EL      + D   Q   F   ++  +    E   
Sbjct: 538 ADVDLMVTDPAAVVADHYDLVVNGVELGGGSRRIHDARVQEIVFRDILKMPESRLTE--- 594

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
                L  L    P  +GIA+GFDRL+ ++ G  ++ +VI  P  +S + E
Sbjct: 595 -FSHLLEALKAGCPPHAGIALGFDRLIAVMLGKESVRDVIAFP--KSGKGE 642



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 65/186 (34%), Gaps = 18/186 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFS 63
           +    R      R  L  R+  +   RE    N   FIEI++  L + +P      R F 
Sbjct: 187 RHLQLRSDRS-LREALRFRSEARKVCREELENNSAPFIEIETPLLFKSTPEGA---REFI 242

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                +        L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+  
Sbjct: 243 VPTRRK---GLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLDLE 299

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E +M     +IR             +            +   EA +R+ +    
Sbjct: 300 MSFATGEDVMGAIEKVIRRLWSSLLGIDLGTE--------PFTRMPYQEAMSRFGSDKPD 351

Query: 184 TTLDNP 189
             L   
Sbjct: 352 ARLGME 357


>gi|260903842|ref|ZP_05912164.1| aspartyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 594

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 68/198 (34%), Gaps = 26/198 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R+    + R    E  F+EI++ +L   +P      R 
Sbjct: 120 ETRLRYRYLDLRRSGPAATMRLRSAANRAARNVLDEQDFLEIETPTLTRSTPEG---ARD 176

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +Q        L  SP+   + L  AG E+ +  A  +R+ +     QPEFT L+
Sbjct: 177 FLVPARLQ--PGSWYALPQSPQLFKQLLQVAGMERYYQMARCYRDEDFRADRQPEFTQLD 234

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    E +++    I+    ++   +I +             +IT AEA  +Y +  
Sbjct: 235 IEASFVEQEDIIELAEKILVALWKLIGHEITT----------PIPHITYAEAMEKYGSDK 284

Query: 182 LGTTLDNPDQPDRHLLYL 199
                +            
Sbjct: 285 PDLRFELELHNLTDFFKD 302



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 17/116 (14%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF------EK 290
             + AP+    +   +DP       +++     E+      +     Q   F      E+
Sbjct: 451 HAFTAPKPEFLDTLESDPGAALAYAYDIVCNGNEIGGGSIRIHRKDVQERVFKIMGISEE 510

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + QEK     E +             P   GIA G+DR+V L+ G ++I EVI  P
Sbjct: 511 DAQEKFGFLLEAFKF---------GAPPHGGIAFGWDRIVSLLAGVDSIREVIAFP 557


>gi|300858570|ref|YP_003783553.1| aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686024|gb|ADK28946.1| Aspartyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41]
          Length = 599

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 70/212 (33%), Gaps = 12/212 (5%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP     L  R+    + R     + F+EI++ +L   +P      R F     +    
Sbjct: 137 RRPTQGGALRLRSKANQAARRVLDTHDFVEIETPTLTRSTPEG---ARDFLVPARL--KP 191

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E  +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 192 GSWYALPQSPQLFKQLLMVAGMEHYYQIARCYRDEDFRADRQPEFTQLDIEMSFVDQDDV 251

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     I+    ++    I +   +    +++   +  ++      +I +    D     
Sbjct: 252 IALAEEIVSELWKLIGYNIPT--PIPRMTYADAMRLYGSDKPDLRFDIKIVECTDYFKDT 309

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
              +   +   A +                  
Sbjct: 310 TFRVFQNEYVGAVVMEGGASQPRRQLDAWQEW 341



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 23/163 (14%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL-------GINCCTILDR-YPAPESALAN 250
             A++ G+    D  ++ +    L E             G +  T +   + +P+     
Sbjct: 409 EIARKLGLIKDGDWAFTWVVDAPLFESSADATASGDVALGHSKWTAVHHAFTSPKPEWLE 468

Query: 251 IYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYP 304
            +  +P       +++     E+      +     Q   F+     E + ++K       
Sbjct: 469 SFDENPGEATAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEEEAREKFG----- 523

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 524 ---FLLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 563


>gi|68171185|ref|ZP_00544591.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|67999379|gb|EAM86022.1| Aspartyl-tRNA synthetase bacterial/mitochondrial type [Ehrlichia
           chaffeensis str. Sapulpa]
          Length = 590

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  ++ R+ I S LR+      FIEI +  L   SP     ++            
Sbjct: 135 RRDKVKNNIILRSKIISELRKSMEAMGFIEIQTPILTSSSPEGARDYLVPSRIHHGKFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  S E
Sbjct: 195 LPQ------APQLFKQILMVSGFDKYFQIAPCFRDEDARSDRSPGEFYQLDIEMSFVSQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +      ++       + K             E   I+  +A   Y 
Sbjct: 249 DVFNVIEPVLLNVFSKFSNKTID---------KEFPRISYHDAMLHYG 287



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 55/175 (31%), Gaps = 11/175 (6%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             T D   +    +  L  ++  +       +  I      +  +    IN        P
Sbjct: 398 SETEDKATELAGEVRTLLGKELNLIEKDTFRFCWIIDFPYFKYDKKEKSINFFHNPFSMP 457

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                  N          ++++    IE+ +              F          Y + 
Sbjct: 458 QGGLEALNNQNPLDILAYQYDIVCNGIEISSGAIRNHKLDIMYKAFSI------AGYTKE 511

Query: 303 YPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             +D+ F           P   GIA G DR+VML+  A NI EVI  P +QS ++
Sbjct: 512 M-VDQKFNSLTRAFKFGAPPHGGIAPGIDRMVMLLADATNIREVICFPLNQSGED 565


>gi|322388563|ref|ZP_08062164.1| aspartate--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140602|gb|EFX36106.1| aspartate--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 626

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 46/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++ G+       +  +    + E  E              P  ++A            
Sbjct: 446 IAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQADTAHELEGDLAKVRA 505

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 506 IAYDIVLNGYELGGGSLRINQKELQERMF------KALGFSTEEANDQFGFLLEAMDYGF 559

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 560 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 589



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 72/224 (32%), Gaps = 19/224 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 161 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 220

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 221 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 274

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 275 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEML 334

Query: 181 DLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDDTWSDIFSRILI 223
               T        +      A +   ++ A D+       ++  
Sbjct: 335 LQDLTDLVKGVDFKVFSEAPAVKAIVVKGAADNYSRKDIDKMTE 378


>gi|66826455|ref|XP_646582.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74997394|sp|Q55C99|SYDM_DICDI RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|60474489|gb|EAL72426.1| aspartyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 692

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 73/188 (38%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
              + +  +  R+ +  + R Y +  QFIE+++ +L + +P            L+   H 
Sbjct: 223 RRDKVQSNIRLRSKVAMAARNYLINQQFIEVETPTLFRPTPEGARE------YLVPTRHQ 276

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   +  + + +
Sbjct: 277 GQFYSLPQSPQQYKQLLMVGGIDRYFQLARCYRDEDLRSDRQPEFTQIDMELSFVNTQMI 336

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            +    +++   + A            N   E  + T  +  + Y  ID   T  +    
Sbjct: 337 YRIIEGLVKTLWKEAG----------FNIDYEFPFYTYEQVLSTY-GIDKPDTRYDMKLV 385

Query: 193 DRHLLYLQ 200
           D    + +
Sbjct: 386 DITDCFNK 393



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 13/113 (11%)

Query: 241 YPAPE----SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           +P       + L+          + +++    +EL      + +   Q    EK ++   
Sbjct: 557 HPEDIDLLLNPLSTPSDYSKIRGQHYDIVINGVELGGGSIRIHNSDVQLRVLEKVLKL-- 614

Query: 297 KIYNETYPIDE--DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E + +      L  L+   P   GIA+GFDRL  L+  +N+I +VI  P
Sbjct: 615 ----EPHMVQRFNHLLTALSMGCPPHGGIALGFDRLCSLLVNSNSIRDVIAFP 663


>gi|327314617|ref|YP_004330054.1| aspartate--tRNA ligase [Prevotella denticola F0289]
 gi|326945678|gb|AEA21563.1| aspartate--tRNA ligase [Prevotella denticola F0289]
          Length = 585

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 61/171 (35%), Gaps = 16/171 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +    QF+E+++  L   +P      R F     +    
Sbjct: 132 RREGVRKNLELRHRMTILIRNFLDAQQFMEVETPVLIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQEDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +     + R                      + E +T  EA  R+ +    
Sbjct: 247 INLFEEMARHLFREIRG----------VELPKLEQMTWHEAMKRFGSDKPD 287



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 8/137 (5%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
                I   +     E    +            +  L + +P   R  K ++     IE+
Sbjct: 423 KCLWVIDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEQVR-AKAYDFVCNGIEV 481

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL-TEMPQSSGIAMGFDRL 329
                 + D   Q   FE           E       FL        P  +G+A G DR 
Sbjct: 482 GGGSLRIHDTQLQEKMFEVL-----GFTPERAEAQFGFLMNAFKYGAPPHAGLAFGLDRF 536

Query: 330 VMLVTGANNINEVIWTP 346
           V ++ G ++I + I  P
Sbjct: 537 VSILAGLDSIRDCIAFP 553


>gi|84388516|ref|ZP_00991063.1| aspartyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84377065|gb|EAP93936.1| aspartyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 590

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 66/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  EN F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSQE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +                      +  +EA  R+   D     +  + 
Sbjct: 244 VRNITEKLVHDMWKELLDVELGQ----------FPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 46/144 (31%), Gaps = 6/144 (4%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +     W+ ++        E   G ++        P   +A           +  ++
Sbjct: 416 DLELTDKKAWAPLWVIDFPMFEEDGEGNLHAMHHPFTSPLGVNAEELKSNPAAANSDAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
           +     E+      +     Q   F     E K    E        L  L    P  +G+
Sbjct: 476 MVINGYEVGGGSVRIHSAEMQTAVFGILGIEAK----EQQEKFGFLLEALKYGTPPHAGL 531

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DRL ML+ G  NI +VI  P
Sbjct: 532 AFGLDRLAMLLCGTENIRDVIAFP 555


>gi|183982171|ref|YP_001850462.1| aspartyl-tRNA synthetase AspS [Mycobacterium marinum M]
 gi|183175497|gb|ACC40607.1| aspartyl-tRNA synthetase AspS [Mycobacterium marinum M]
          Length = 593

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 70/211 (33%), Gaps = 30/211 (14%)

Query: 3   QIP---SQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P    +P    +   + R            +  R+ + ++ R     + F+EI++ ++
Sbjct: 108 PLPFQLDEPAG-EELRLKYRYLDLRRDGPASAIRLRSKVNAAARAVLAGHDFVEIETPTI 166

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              +P      R F     +         L  SP+   + L+ AG E+ +  A  +R+ +
Sbjct: 167 TRSTPEG---ARDFLVPARLH--PGMFYALPQSPQLFKQLLMVAGMERYYQIARCYRDED 221

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                QPEFT L+   +    E ++     I+     +   +I +              I
Sbjct: 222 FRADRQPEFTQLDMELSFVDVEDIIAVSEEILTALWALIGYRIPT----------PIPRI 271

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           + A+A  R+ +                    
Sbjct: 272 SYADAMRRFGSDKPDLRFGLELVECAEFFKD 302



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + AP+  L +   +DP       +++     E+      +     Q   F      K   
Sbjct: 453 FTAPKPELEDRIESDPGSVLADAYDIVCNGHEIGGGSIRIHRRDIQERVFAVMGLSKA-- 510

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L   T   P   GIA G+DR+  L+ GA++I +VI  P
Sbjct: 511 --EAEEKFGFLLEAFTFGAPPHGGIAFGWDRVSTLLAGADSIRDVIAFP 557


>gi|294656878|ref|XP_459196.2| DEHA2D16346p [Debaryomyces hansenii CBS767]
 gi|199431809|emb|CAG87367.2| DEHA2D16346p [Debaryomyces hansenii]
          Length = 704

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 10/125 (8%)

Query: 236 TILDRYPAPESALANIY--PADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P   + L +     +DP     + ++L    +E+      + DP  Q++ FEK 
Sbjct: 554 FESTHHPFTMAKLEDYDLLASDPLKVRGEHYDLVINGVEVGGGSRRIHDPQLQKYIFEKI 613

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++ +       + +    L  L+   P  +G+A+GFDRL  ++ G+ +I +VI  P +QS
Sbjct: 614 LKIRNY-----HELFGHLLHALSMGCPPHAGLALGFDRLCTMLIGSTSIRDVIAFPKNQS 668

Query: 351 NQEEI 355
             + +
Sbjct: 669 GIDTV 673



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 59/144 (40%), Gaps = 8/144 (5%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSL-QYSPGNETHIRA 61
           +P Q  + +      +  L  R+ + + +R  F  ++ F+EI++  L + +P      R 
Sbjct: 180 LPPQFRYLQLRTPFYQNALRTRSKVANLIRNIFVEKHDFVEIETPLLFKSTPEG---ARE 236

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F       D       L  SP+   + L+++G  + F  A  +R+ +     QPEFT ++
Sbjct: 237 FLVPTRSHDRF---YALPQSPQQYKQILMSSGFTRYFQIAKCFRDEDLRADRQPEFTQID 293

Query: 122 WYRAHESYEQLMKDCMNIIRCAAE 145
              ++ +    +   +  +     
Sbjct: 294 LEMSYINNSDQVGLVVEDLIHNIW 317


>gi|332525588|ref|ZP_08401743.1| aspartyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332109153|gb|EGJ10076.1| aspartyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 595

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 74/208 (35%), Gaps = 20/208 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  +   +R+Y  E  F++I++  L   +P     ++        +   
Sbjct: 131 RRPTMQKNLMLRYRVAMEVRKYLDEQGFVDIETPMLTKSTPEGARDYLVPSRVHDGMFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    EQ
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFLGEEQ 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +    ++R     A                  E +T AEA  RY +   DL   L+  
Sbjct: 245 IREITEGMVRRVFRNALGVELPVY----------ERLTYAEAMHRYGSDKPDLRVKLEFT 294

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
           +  D          AG         + +
Sbjct: 295 ELTDVMKTVDFKVFAGPATMKGGRVAAL 322



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 39/140 (27%), Gaps = 5/140 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                    +    + E  +     N        P                 K +++   
Sbjct: 426 FEDKWAPLWVVDFPMFEHDDEAGRWNAVHHPFTAPKDGHEDLMDTDPGACVAKAYDMVLN 485

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             EL      +     Q   F+      +    +        L  L    P   G+A G 
Sbjct: 486 GWELGGGSVRIHRAEVQSKVFKALNISAE----DAKVKFGFLLDALQYGAPPHGGLAFGL 541

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DRLV L+T A +I +VI  P
Sbjct: 542 DRLVTLMTKAESIRDVIAFP 561


>gi|256420263|ref|YP_003120916.1| aspartyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256035171|gb|ACU58715.1| aspartyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 582

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 68/225 (30%), Gaps = 22/225 (9%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR      L  R  +  S R Y     F++I++  L   +P      R F     +    
Sbjct: 130 RRNIVKQNLELRYRVNRSARNYLDSRGFMDIETPFLIKSTPEGA---RDFVVPSRMN--- 183

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    E 
Sbjct: 184 PNEFYALPQSPQTFKQLLMVSGYDRYYQIVKCFRDEDLRADRQPEFTQIDCEMSFVDQED 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY-----ANIDLGTTL 186
           ++    N+++          F             E+    +   R+        D     
Sbjct: 244 ILNTFENMMKHIFMEIKGISFEDAFPRMTWDDAMEFYGNDKPDIRFDMKLVNMNDTAKGA 303

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +     D  L+     +                 +      P +G
Sbjct: 304 NFKVFDDAELVVAICAKGCAE-----YTRKQLDELTEWVKRPQIG 343



 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 43/155 (27%), Gaps = 7/155 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP--ESALANIY 252
            L     ++ G+R  +      +    L E  E              P P     + ++ 
Sbjct: 402 ELRLEMGERLGLRDKNVFKPLWVIDFPLFEYAEEENRWVARHHPFTSPKPEHIEWMNDLS 461

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
                    +++     E+      +     Q   F            E        L  
Sbjct: 462 KYADIKANAYDIVLNGTEVGGGSIRIFQRDLQEKMF----AALGMSPEEANHKFGFLLGA 517

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P   GIA GFDRL  L+ G+  I + I  P
Sbjct: 518 FEYGAPPHGGIAFGFDRLCSLLGGSETIRDFIAFP 552


>gi|50365182|ref|YP_053607.1| aspartyl-tRNA synthetase [Mesoplasma florum L1]
 gi|62287554|sp|Q6F1A0|SYD_MESFL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|50363738|gb|AAT75723.1| aspartyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 577

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A+   +   +D     I    L E  +              P  +S        
Sbjct: 399 AVRNKVAEILNLADPNDYKLLWIIDFPLYEWSDEESRYVAAHNPFTMPNIKSIDDFETNK 458

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI-DEDFLACL 313
           +      ++L     EL +    + D   Q+  FE        + +ET       F+   
Sbjct: 459 EDAIADSYDLVLNGFELGSGGVRITDSGIQQRMFEA-----VGLDDETIEKNFGWFINAY 513

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P  +G A G DR++ML+T + +I +VI  P
Sbjct: 514 KYGAPNHAGFAFGIDRVIMLLTHSESIRDVIAFP 547



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 74/194 (38%), Gaps = 11/194 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
              + +  +L R  + S +R+ F  + F+E+++    + +P      R F         +
Sbjct: 128 RRQKIQNNMLLRAKVNSIIRKEFEADNFVEVETPYFGKSTPEG---ARDFLVPSR----L 180

Query: 73  RKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            K  +  L  SP+   + L+ +G +K +     +R+ +     QPEFT L+   +  S  
Sbjct: 181 NKNTFYALPQSPQLYKQLLMVSGFDKYYQIVRCFRDEDLRNDRQPEFTQLDMEMSFASAT 240

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++      +I+          F  + +   PF E   +  ++      ++ + T  +  D
Sbjct: 241 EVQDQIEKVIKKIFLEVKGIDFKEKLIK-MPFREAIDLYGSDKPDIRFDLKINTLNEIFD 299

Query: 191 QPDRHLLYLQAQQA 204
           +    L     +  
Sbjct: 300 KTQIKLFESFKENK 313


>gi|329960003|ref|ZP_08298499.1| aspartate--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328533137|gb|EGF59906.1| aspartate--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 585

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 73/215 (33%), Gaps = 25/215 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R+Y     FIE+++  L   +P      R F     +    
Sbjct: 132 RRANVRSNLELRHKMTIEVRKYLDSQGFIEVETPILVGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQDDI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +       +              +  A+A   Y +          D+P
Sbjct: 247 INLFEGMAKYLFKEIRGVELT---------GPFLRMPWADAMKYYGS----------DKP 287

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           D        +  GI   H  T  D  + I     E
Sbjct: 288 DLRFGMKFVELMGILKGHGFTVFDNAAYIGGICAE 322



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGNQLGLRDKNQFALLWVVDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    IE+      + D   Q   FE           E         +   
Sbjct: 465 AAVRADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEIL-----GFTPEKAQEQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V +  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSIFAGLDSIRDCIAFP 553


>gi|326382140|ref|ZP_08203832.1| aspartyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198870|gb|EGD56052.1| aspartyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 605

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 30/211 (14%)

Query: 3   QIPSQPWWNR--DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P Q       +   R R            +  R+ + ++ R     + F+EI++ +L 
Sbjct: 106 PLPFQLDEQPGEEARLRHRYLDLRREGPAKAIRLRSQVSAAARSVLGSHDFVEIETPTLT 165

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P      R F     +Q       Y L  SP+   + L+ AG E+ +  A  +R+ +
Sbjct: 166 KSTPEG---ARDFLVPARLQ---PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDED 219

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                QPEFT L+   +    + ++     I+    ++   ++ +              +
Sbjct: 220 FRADRQPEFTQLDIEMSFVDEDDVIALAEEILVALWKLIGVELTT----------PIPRM 269

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           T A+A  R+ +       D            
Sbjct: 270 TYADAMRRFGSDKPDLRFDIELVECTEFFAD 300



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 33/106 (31%), Gaps = 5/106 (4%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P PES               +++     E+      +     Q   F    +       +
Sbjct: 454 PKPESLDKLESNPGEALAYAYDIVCNGNEIGGGSIRIHRRDVQERVF----KIMGIGEED 509

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   L       P   GIA G+DR+  L+ G  +I EVI  P
Sbjct: 510 AQEKFGFLLDAFSYGAPPHGGIAFGWDRITALLAGEPSIREVIAFP 555


>gi|530412|emb|CAA83720.1| Asp-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 483

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 56/137 (40%), Gaps = 10/137 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R  I   +R Y  +  F+E+++      +P             ++   +
Sbjct: 87  RRQVMQNNLIIRAKINHIIRNYLTDLNFLEVETPYFAKSTPEGAR-------HFLVPSRL 139

Query: 73  RKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            K  +  L  SP+   + L+ +G ++ +     +R+ +     QPEFT L+   +  + E
Sbjct: 140 NKNKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQPEFTQLDLEMSFATSE 199

Query: 131 QLMKDCMNIIRCAAEVA 147
            +M+   ++I+   +  
Sbjct: 200 DVMQISESLIKKILKEV 216



 Score = 45.0 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 33/130 (25%), Gaps = 5/130 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A+   +    D     +    L E  E              P  ES        
Sbjct: 356 AIRISLAKMFNLETKDDFKLLWVVDFPLFEFSEQENRYVAAHHPFTSPKEESLADFDTNK 415

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  ++L     E+      + +   Q+  F  +  E  +   E       F+    
Sbjct: 416 KDALACAYDLVMNGFEIGGGSQRITNSEIQQRMF--DAVELNQKQVEANF--GWFMNAYK 471

Query: 314 TEMPQSSGIA 323
              P  +GIA
Sbjct: 472 YGAPYHAGIA 481


>gi|194884465|ref|XP_001976268.1| GG22777 [Drosophila erecta]
 gi|190659455|gb|EDV56668.1| GG22777 [Drosophila erecta]
          Length = 1145

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 19/196 (9%)

Query: 17  RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRK 74
             +  L  R+ +   +REY +    F+E+++ +L + +PG       F        H   
Sbjct: 596 DMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQE---FVVPTRKAGHF-- 650

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
              L  SP+   + L++ G ++ F  A  +R+       QPEFT L+   +  S + +M+
Sbjct: 651 -YSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSRDDIMQ 709

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
                +R           S+        +    IT  EA  +Y   D   T       + 
Sbjct: 710 LIEETLRY----------SWPKDFPRLQTPFRRITYEEAMEKY-GNDKPDTRFGFLLNNV 758

Query: 195 HLLYLQAQQAGIRVAH 210
             +  ++     +   
Sbjct: 759 SEIIEKSDDFKEKYED 774



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 60/210 (28%), Gaps = 38/210 (18%)

Query: 166  EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
                V E   +    D+ T +   D+ D     L     G +V        I        
Sbjct: 815  PTQDVQEKLGKLLGEDVATEI--ADKFDLEENDLLFLGIGPKVETRAILGRIRLDYHEFL 872

Query: 226  IE----PNLGINCCTILDRYPAPES------------ALANIYPADPRF----------- 258
            +E              +  +P  E                  +  D              
Sbjct: 873  VENAKVKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLDNFATSCENLENI 932

Query: 259  -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             ++ ++L     E+      + D   Q    E+ ++         +      L+ L    
Sbjct: 933  RSQAYDLVLNGQEVGGGSIRIHDRDMQHFILEQILKI-------PHDHLSHLLSALESGC 985

Query: 317  PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   GIA+G DRL+ ++  A +I +VI  P
Sbjct: 986  PPHGGIALGLDRLIAILCRARSIRDVIAFP 1015


>gi|319953296|ref|YP_004164563.1| aspartyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421956|gb|ADV49065.1| aspartyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 584

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 77/226 (34%), Gaps = 12/226 (5%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R++  +  FIE+++  L   +P      R F     + +  
Sbjct: 133 RRNPVKNNLIFRHKVAMEVRKFLSDEGFIEVETPYLIKSTPEG---ARDFVVPSRMNE-- 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDI 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    N+ +   +    K F   +     + +       +      ++  G   +     
Sbjct: 248 LNIFENLTKYLLKEV--KGFEIDSFPRMTYDDAMRTYGNDKPDIRFDMKFGELNNVAQHK 305

Query: 193 DRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLGINCCTI 237
           +  +        GI V             ++     P +G      
Sbjct: 306 EFGIFNDAELVVGIAVPGAATYTRKEIDALIDWVRRPQVGAKGMVY 351



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 46/157 (29%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R   +     +    L+E  E     +        P P          
Sbjct: 404 ALRMELAERLGLRNPEEFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q   F+       + K +            +
Sbjct: 464 GAVKANAYDLVLNGNEIGGGSIRIHDKDMQATMFKHLGFTPEEAKAQFG--------FLM 515

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   G+A G DRLV ++ G   I + I  P
Sbjct: 516 DAFQYGAPPHGGLAFGLDRLVAILGGQETIRDFIAFP 552


>gi|229895865|ref|ZP_04511035.1| Asparaginyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229700788|gb|EEO88817.1| Asparaginyl-tRNA synthetase [Yersinia pestis Pestoides A]
          Length = 223

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 74/236 (31%), Gaps = 24/236 (10%)

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EF M+E   A  S + +      +++   +       + +  +   F+E       +   
Sbjct: 3   EFWMVEPEVAFASLDDVAGLAEKMLKYVFQAV----LNERADDMKFFAERVDKDAVDRLQ 58

Query: 176 RYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
           R+   D           D          +G +  +D +W    S      +         
Sbjct: 59  RFVTSDFAQV-------DYTDAIEILLASGQKFENDVSWGIDLSSEHERYLAEKHFKAPV 111

Query: 236 TILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE-KEMQE 294
            +   YP    A       D +             L     E++   ++  R +  + + 
Sbjct: 112 VVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDARL 164

Query: 295 KKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            +   N+    D  +   L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 165 AEMGLNKE---DYWWYRDLRRYGTVPHSGFGLGFERLISYVTGVQNVRDVIPFPRT 217


>gi|224534804|ref|ZP_03675376.1| aspartate--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514052|gb|EEF84374.1| aspartate--tRNA ligase [Borrelia spielmanii A14S]
          Length = 586

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 13/187 (6%)

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI--FSRILIE-- 224
           T  +   +  +++    +         +      Q  I++A+D    D   F  + +   
Sbjct: 371 TEEQQLIKTYSLENNDIIFFTANNKWEIACKAMGQIRIKIANDLELIDDNKFEFLWVYDF 430

Query: 225 ----KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
                 +          +   P            +    + ++L    +EL +    + +
Sbjct: 431 PLFEYDKNTKTYTPAHHMFSLPKKRYIANLEKNPNKTMGEIYDLVLNGVELGSGSIRIHN 490

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
              Q+  F     +K+K  +        FL  L    P   GIA+G DRL+ML+T + +I
Sbjct: 491 KELQQRIFNIIGFQKEKSED----RFGFFLKALEYGAPNHGGIAIGIDRLIMLMTKSTSI 546

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 547 KDVILFP 553



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 97/292 (33%), Gaps = 15/292 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R      +R + V+ +F+E+++ +    +P      R F     I    
Sbjct: 131 RRDSLKNKIILRCQATHLIRNFLVKRKFLELETPTFVKSTPEG---ARDFVIPSRIH--- 184

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + ++ AG +K F  A  +R+ +     QPEFT L+   +    E 
Sbjct: 185 KGSFYALPQSPQLYKQLIMIAGFDKYFQIARCYRDEDSRGDRQPEFTQLDLEMSFVKKEN 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + K   N++    +         +                +   R+  I    + +  + 
Sbjct: 245 IFKLIENMLFLIFKNCLNINLPKKFKKITYKKAMNTYGSDKPDTRFELILQDISRNLKNS 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
                      +  I++      +D FSR  I  +E    +     L  +   E+   + 
Sbjct: 305 EFNIFKDTLKNKGVIKILIVKNKADKFSRAKINNLEEIAKLYKTQGLY-FTKIENNKFSG 363

Query: 252 YPADPRFTKRFELYACNIELCNA--CDELLDPIEQRHRFEKEMQEKKKIYNE 301
             A    T+  +L        N        +  E   +   +++ K     E
Sbjct: 364 GIAKFLKTEEQQLIKTYSLENNDIIFFTANNKWEIACKAMGQIRIKIANDLE 415


>gi|188591186|ref|YP_001795786.1| aspartyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|238692931|sp|B2AH15|SYD_CUPTR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|170938080|emb|CAP63064.1| aspartate tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 602

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 47/152 (30%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A            +    + E  E +            P  E              K +
Sbjct: 425 KANGLFEDAWKPLWVVDFPMFEYDEEDARWVAMHHPFTSPKDEHLEYLETDPGKCLAKAY 484

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 485 DMVLNGWEMGGGSVRIFRSDIQSKVF----RALKINDEEARAKFGYLLDALQYGAPPHGG 540

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           +A G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 541 LAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 572



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 76/205 (37%), Gaps = 21/205 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R++     FI+I++  L + +P     ++            
Sbjct: 134 RRPQMQYNLRLRYKVAMEVRKFLDAQGFIDIETPMLGKSTPEGARDYLVPSRVNPGHFFA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 194 LPQ------SPQIFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLTEQE 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++R   + A         ++ +  ++   +   EA AR+         D   +
Sbjct: 248 IRDLFEDMMRTVFKNA---------IDVDLDAKFPVMEFREAMARFG----SDKPDLRVK 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSD 216
            +   L    +    +V      SD
Sbjct: 295 LEFTELTEVMKDVDFKVFSGPANSD 319


>gi|149244654|ref|XP_001526870.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449264|gb|EDK43520.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 697

 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 16/126 (12%)

Query: 236 TILDRYPAPESALANI----YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P       +             + ++L    +E+      + DP  Q++ FE+ 
Sbjct: 554 YESTHHPFTMCKSEDYELMGSNPLQVRGEHYDLVINGVEVGGGSRRIHDPALQKYVFEEI 613

Query: 292 MQEKKKIYNETYPIDE---DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +Q K          D+     L  L+   P  +G+A+GFDRL  +V G+++I +VI  P 
Sbjct: 614 LQIK--------HYDQLFGHLLKALSMGCPPHAGLALGFDRLCAMVVGSSSIRDVIAFPK 665

Query: 348 SQSNQE 353
           +QS ++
Sbjct: 666 NQSGKD 671



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 82/267 (30%), Gaps = 8/267 (2%)

Query: 22  LLKRNMIQSSLREYF-VENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ I   +R      + F+EI++  L + +P      R F           +   L 
Sbjct: 197 LRTRSKIAQLVRNTLVNNHDFVEIETPLLFKSTPEG---AREFLVPTRT---YDQFYALP 250

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+A+G  + F  A  +R+ +     QPEFT ++   ++ +  + +   +  
Sbjct: 251 QSPQQYKQILMASGFTRYFQLAKCFRDEDLRADRQPEFTQVDLEMSYINSAEQIMKVVED 310

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +     +      ++         +   I   +                 D+PD      
Sbjct: 311 VVMNIWLKICNRPTYTLNEKGFLQKLTDIDNNKVQFSKLAYPEALLKYGIDKPDLRSDIT 370

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
                   +  +++   +    ++     N   +    L +        +   P      
Sbjct: 371 FITLDEFFIGEENSEFSVVEACVLRNALDNENKSSKNKLPKELTSTHNYSRRRPYVWAIR 430

Query: 260 KRFELYACNIELCNACDELLDPIEQRH 286
              +L      +     +  +  +++ 
Sbjct: 431 NDKDLLWYEKLVEKKFMKKTNHFDEKK 457


>gi|110636537|ref|YP_676744.1| aspartyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|122967031|sp|Q11YW2|SYD_CYTH3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110279218|gb|ABG57404.1| aspartyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 616

 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 72/227 (31%), Gaps = 12/227 (5%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +    R Y   N F+E+++  L   +P      R F     +   
Sbjct: 132 LRRDAVRKNLELRHKVSRETRTYLDANNFLEVETPVLIKSTPEG---ARDFVVPSRMN-- 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 187 PGQFYALPQSPQTFKQLLMVAGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     ++R   +    K F    V    F++      ++       +      D    
Sbjct: 247 ILNMFEGLVRHLFKTV--KEFDLPEVPRMLFADAMKYYGSDKPDIRFGMKFVELTDIVQS 304

Query: 192 PDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEKIEPNLGINCCTI 237
               +        GI      +        +      P +G      
Sbjct: 305 QGFQVFDEANLVVGINAEGCAEYTRKEIDALTEFVKRPQVGAKGMVW 351



 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 47/159 (29%), Gaps = 15/159 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R         +    L+E  E              P    A   +   
Sbjct: 404 DLRLEIGSRLGLRPKDKFAALWVIDFPLLEFGEEEQRWFAMHHPFTSPKDIDAFMKLPFD 463

Query: 255 DPR--FTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDED 308
                    ++L    +E+      + D   Q   FE     E + K +           
Sbjct: 464 QLGSVNANAYDLVINGVEVGGGSIRIYDRTVQNKMFEVLGFTEEEAKAQFG--------F 515

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L       P  +G+A GFDRL  +  G ++I + I  P
Sbjct: 516 LLEAFEYGAPPHAGLAFGFDRLCSIFGGVDSIRDFIAFP 554


>gi|313680016|ref|YP_004057755.1| aspartyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152731|gb|ADR36582.1| aspartyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 584

 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 66/188 (35%), Gaps = 18/188 (9%)

Query: 16  YRRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR+P L     R+ +  ++ ++     F+++++  L   +P      R F     +   
Sbjct: 139 LRRKPMLDRLRLRHTVIKAIWDFLSAEGFVQVETPFLTRSTPEGA---RDFLVPSRL--E 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             K   L  SP+   + L+ AG ++ F  A  +R+ +     QP+FT L+   +  S E 
Sbjct: 194 PGKFYALPQSPQLFKQMLMIAGVDRYFQIARCFRDEDLRADRQPDFTQLDLEMSFVSQED 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++      A                    +   EA  RY +    T      +
Sbjct: 254 IWAINERLVAHVFREALGVELP---------LPFPRMPYREALERYGSDKPDTRFGLELE 304

Query: 192 PDRHLLYL 199
           P   L   
Sbjct: 305 PADALFAN 312



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 51/160 (31%), Gaps = 14/160 (8%)

Query: 199 LQAQQAGIRV-AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
             A   GI     +  W   F  +  +                +P     L         
Sbjct: 411 ALADLLGIERSGWNFLWVVDFPLLEWDSDLELWTYMHHPFTSPHPEDLPLLE--SDPGRV 468

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY---NETYPIDEDFLACL- 313
             + ++L     E+      +        R E + +    +     E       FL  L 
Sbjct: 469 RAQAYDLVLNGTEVGGGSIRIH-------RMELQQKMFDVLGIPREEAEEKFGFFLEALR 521

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR + L++GA +I EVI  P +QS ++
Sbjct: 522 YGAPPHGGIAWGLDRFLALMSGAASIREVIPFPKNQSGRD 561


>gi|289706218|ref|ZP_06502581.1| aspartate--tRNA ligase [Micrococcus luteus SK58]
 gi|289557057|gb|EFD50385.1| aspartate--tRNA ligase [Micrococcus luteus SK58]
          Length = 604

 Score = 97.0 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 68/195 (34%), Gaps = 22/195 (11%)

Query: 11  NRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            R  +   RRP     +  R+ +  + RE      F+E+++ +L   +P      R F  
Sbjct: 120 LRHRYLDLRRPQPSRIMRLRSEVNRTARELLHGEGFVEVETPTLTRSTPEG---ARDFLV 176

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +         L  SP+   + L   G EK +  A  +R+ +     QPEFT L+   
Sbjct: 177 PARL--APGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQPEFTQLDIEA 234

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    + ++     I++    +             +  +    +T AEA  +Y   D   
Sbjct: 235 SFVEQDDVIALGEKIVKALWALVG----------VDVPTPIRRMTYAEAMEKY-GSDKPD 283

Query: 185 TLDNPDQPDRHLLYL 199
                +  D    + 
Sbjct: 284 LRFGLELTDLTEYFK 298



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 17/114 (14%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE------KEM 292
           + +P+   A+ +  DP       +++     E+      +     Q   FE      +E 
Sbjct: 459 FTSPKPEFADTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRQDVQERVFEVMGLSPEEA 518

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            EK     E +             P   GIA G+DR+V L+ G  +I EVI  P
Sbjct: 519 NEKFGFLLEGFK---------YGAPPHGGIAFGWDRVVALLAGTESIREVIAFP 563


>gi|256819652|ref|YP_003140931.1| aspartyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256581235|gb|ACU92370.1| aspartyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 582

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 72/224 (32%), Gaps = 27/224 (12%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+ +   +R Y     FIE+++  L   +P      R F     +        Y
Sbjct: 138 RDNLIFRHKVGIMVRNYLSGQGFIEVETPVLIKSTPEG---ARDFVVPSRMN---PGEFY 191

Query: 78  -LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   + L+  G +K F     +R+ +     QPEFT ++   +    E ++   
Sbjct: 192 ALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDVISTF 251

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGTTLDN 188
             + +   +                F     +T AEA   Y          +  G   D 
Sbjct: 252 EGLAKHLLKELKGL----------DFGAFPRMTYAEAMKTYGNDKPDIRFGMKFGELNDL 301

Query: 189 PDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLG 231
               D  +        GI V   +         ++     P +G
Sbjct: 302 AQHRDFKVFNEAELVVGIAVPGANSYTRKEIDALVEWVKRPQVG 345



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 46/154 (29%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+R   +     +    L+E  E              P PE         
Sbjct: 404 ALRMELAERLGLRNPDEYAPLWVVDFPLLEWSEEEERFFAMHHPFTSPKPEDIPLLDSNP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  ++L     E+      + +   Q   F     +      E       FL    
Sbjct: 464 GEVRANAYDLVLNGNEVGGGSIRIFNQELQAKMF-----QLLGFTPEQAQAQFGFLMNAF 518

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A GFDRLV L+ G   I + I  P
Sbjct: 519 KYGAPPHGGLAFGFDRLVALLGGQETIRDFIAFP 552


>gi|256384356|gb|ACU78926.1| aspartate--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385188|gb|ACU79757.1| aspartate--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455509|gb|ADH21744.1| aspartate--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 574

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 6/135 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R  I   +R +  +  F+E+++      +P      R F     +    
Sbjct: 128 RRQVMQNNLIIRAKINHIIRNFLTDLNFLEVETPYFAKSTPEG---ARDFLVPSRLNK-- 182

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ +G ++ +     +R+ +     QPEFT L+   +  + E +
Sbjct: 183 NKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQPEFTQLDLEMSFATSEDV 242

Query: 133 MKDCMNIIRCAAEVA 147
           M+   ++I+   +  
Sbjct: 243 MQISESLIKKILKEV 257



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 54/183 (29%), Gaps = 11/183 (6%)

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I   +   +   I          Q    +    A+   +    D     +    L E  E
Sbjct: 369 IKEFDIKNKATIILNIGKYAEISQLMGAIRISLAKMFNLETKDDFKLLWVVDFPLFEFSE 428

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                         P  E                ++L     E+      + +P  Q+  
Sbjct: 429 QENRYVAAHHPFTSPKEECLTDFDTNKKDALACAYDLVMNGFEIGGGSQRITNPEIQQRM 488

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL----TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           F         +      ++ +F   +       P  +GIA G DR+ M++T +N+I +VI
Sbjct: 489 F-------DAVELTAKQVETNFGWFMNAYKYGAPYHAGIAWGLDRISMILTDSNSIRDVI 541

Query: 344 WTP 346
             P
Sbjct: 542 AFP 544


>gi|83590512|ref|YP_430521.1| aspartyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|97196732|sp|Q2RHW1|SYD_MOOTA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83573426|gb|ABC19978.1| aspartyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 600

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L  R     ++R++     F EI++  L   +P      R F     +    
Sbjct: 142 RRPEMQRLLYLRYRTTRAIRDFLDARGFWEIETPMLTRSTPEG---ARDFLVPSRL--RP 196

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ F     +R+ +     QPEFT L+   +    E +
Sbjct: 197 GEFFALPQSPQLFKQILMVAGVERYFQIVRCFRDEDLRADRQPEFTQLDMEMSFVQREDI 256

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +K    ++                           +T  EA  RY   D        +  
Sbjct: 257 LKLVEELMAYVFRETLGVEL---------ALPLPRLTYREAMDRY-GSDKPDIRFGMEIV 306

Query: 193 DRHLLYLQA 201
           D   L    
Sbjct: 307 DVSDLVAGC 315



 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 38/135 (28%), Gaps = 14/135 (10%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +L    E    +         P  E                ++L    +EL      +  
Sbjct: 442 LLEYSAEEKRYVAVHHPFTM-PMEEDWPLLDSDPLRVRALAYDLVLNGVELGGGSIRIHR 500

Query: 281 PIEQRHRFEKE----MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
              Q   F          + K            L       P   GIA G DR++ML+  
Sbjct: 501 RDIQEKMFNLLGFTPEAARDKFG--------FLLDAFEYGTPPHGGIAFGLDRMLMLMAR 552

Query: 336 ANNINEVIWTPFSQS 350
            + I + I  P +QS
Sbjct: 553 RDTIRDCIPFPKTQS 567


>gi|227872750|ref|ZP_03991073.1| aspartate--tRNA ligase [Oribacterium sinus F0268]
 gi|227841411|gb|EEJ51718.1| aspartate--tRNA ligase [Oribacterium sinus F0268]
          Length = 597

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 64/187 (34%), Gaps = 17/187 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R  +   +R +     F+EI++ +L   +P      +            
Sbjct: 141 RRPDLAKRIMTRARLSQLIRAFLSREGFLEIETPTLIKSTPEGARDFLVPSRLHQGSFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 201 LPQ------SPQLLKQLLMVSGMDRYFQLARCYRDEDLRADRQPEFTQVDMELSFVDMED 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++    +++   +   Q   S            + +T  +A   Y +       D P  
Sbjct: 255 VLEVNERLLQYIFKEICQVDIS---------LPLQRMTWIDAMENYGSDKPDLRFDLPLL 305

Query: 192 PDRHLLY 198
                + 
Sbjct: 306 ECTEAVR 312



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 60/204 (29%), Gaps = 14/204 (6%)

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY--------LQAQQAGIRVAHDDT 213
           F++       +       ++ G  L       + +++           +   +       
Sbjct: 375 FAKFMSEEDVKRLTEATGLEQGDLLFLVSDEKKQVVWNSLGALRLALGKDLDLIQKGQWK 434

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPES-ALANIYPADPRFTKRFELYACNIELC 272
           +  +    + E  E              P  E   L +         K +++     EL 
Sbjct: 435 FLWVTEFPMFEYSEELGRYQAMHHPFTMPMEEDLPLVDEEDLSRVRAKAYDIVLNGTELG 494

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVM 331
                +     Q    EK    K++            L      +P  +G+A G DRL M
Sbjct: 495 GGSVRIHQSHVQEKMLEKLGFTKER----ATEQFGFLLEAFQYGVPPHAGLAYGLDRLAM 550

Query: 332 LVTGANNINEVIWTPFSQSNQEEI 355
            + GA +I +VI  P  +   + +
Sbjct: 551 WMVGAESIRDVIAFPKGKDGSDAM 574


>gi|189499969|ref|YP_001959439.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|238692298|sp|B3EQ26|SYD_CHLPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189495410|gb|ACE03958.1| aspartyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 608

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 63/187 (33%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    +  R+ + S +R Y  E  F+EI +  L   SP      R F     +    
Sbjct: 146 RREKIHENIHFRSRLISEVRRYLEERSFMEIQTPILTSSSPEG---ARDFLVPSRLH--P 200

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G  + F  A  +R+ +      P EF  ++   A    + 
Sbjct: 201 GKFYALPQAPQQFKQLLMVSGFSRYFQIAPCFRDEDARADRSPGEFYQIDMEMAFIEQDD 260

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L +    + +   E  + K  +              I+  E   RY   D        + 
Sbjct: 261 LFEILEGMFKHLTEKMSNKRITQ--------FPFPRISYKEVMNRY-GSDKPDLRIPVEI 311

Query: 192 PDRHLLY 198
            D   L+
Sbjct: 312 EDVTELF 318



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 49/148 (33%), Gaps = 11/148 (7%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
            + ++  +    + E  E    I         P  E               ++++    I
Sbjct: 435 DELSFCWVVDFPMYEYDEAAKKIEFSHNPFSMPQGEMEALETMDPLDILAYQYDIVCNGI 494

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQSSGIAMG 325
           EL +       P      F          Y +   +D+ F   +       P   GIA G
Sbjct: 495 ELSSGAIRNHRPDIMYRAFGI------AGYEKA-EVDKRFGHMIEAFNMGAPPHGGIAPG 547

Query: 326 FDRLVMLVTGANNINEVIWTPFSQSNQE 353
            DRLVM++    NI EVI  P +Q  ++
Sbjct: 548 LDRLVMILRDEQNIREVIAFPMNQQAED 575


>gi|319946029|ref|ZP_08020278.1| aspartate--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747837|gb|EFW00082.1| aspartate--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 584

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLTEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFEML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LTDLTEVVKCVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 46/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    + E  E              P  E+A       
Sbjct: 402 ALRCRIAKELDLIDNSQFNFLWVVDWPMFEWSEEEDRYMSAHHPFTLPQAETAHELEGDL 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++     EL      +     Q   F      K+    +        L  + 
Sbjct: 462 AKVRAIAYDIVLNGYELGGGSLRINQKELQERMFTALGFSKE----DATEQFGFLLEAMD 517

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 518 YGFPPHGGLALGLDRFVMLLAGEENIREVIAFP 550


>gi|311894852|dbj|BAJ27260.1| putative aspartyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 600

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 69/200 (34%), Gaps = 26/200 (13%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
           N +   R R            L  R+ +   +R    EN F++I++  L   +P      
Sbjct: 117 NEEVRLRYRYLDLRREGPARALRLRSKVNHIIRTVMEENDFLDIETPYLTRSTPEG---A 173

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F   + +Q        L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT 
Sbjct: 174 RDFLVPVRLQ--PGHWYALPQSPQLFKQLLMVAGMERYYQIARCFRDEDFRADRQPEFTQ 231

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   +    E ++     I+    +  +                   +  A+A ARY  
Sbjct: 232 LDIEASFVDQEDVLALGEKIVGRIWKDVHGYEIP---------DPLPRLAYADAMARY-G 281

Query: 180 IDLGTTLDNPDQPDRHLLYL 199
            D        +  D    + 
Sbjct: 282 SDKPDVRFGQELTDLTAYFQ 301



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 55/164 (33%), Gaps = 17/164 (10%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP--APESALANIYPADP 256
              ++  +       +  +    + E IE + G         +P  AP +     +  DP
Sbjct: 404 EIGRRCDLIDESQWAFLWVVDFPMFEPIEDDKGEFQGWHAVHHPFTAPTAESLATFDTDP 463

Query: 257 RFT--KRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  ++L     EL      +     Q+  F+     E +   +            L
Sbjct: 464 GSALSNAYDLVLNGSELGGGSIRIHQRDVQKRAFDAIGLSEEEAAAQFG--------FLL 515

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  P   GIA+G DR+V L+ G + I +VI  P + +  +
Sbjct: 516 DAFNYGPPPHGGIALGLDRVVTLLGGYDTIRDVIAFPKTSTGGD 559


>gi|198474023|ref|XP_001356528.2| GA16436 [Drosophila pseudoobscura pseudoobscura]
 gi|198138214|gb|EAL33592.2| GA16436 [Drosophila pseudoobscura pseudoobscura]
          Length = 1106

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 89/279 (31%), Gaps = 23/279 (8%)

Query: 13  DFHY-RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQ 69
           D  +   +  L  R+ +   +REY V    F+E+++ +L + +PG       F       
Sbjct: 548 DLRFNDMQHNLRLRSSVIMKMREYLVNYLGFVEVETPTLFRRTPGGAQE---FVVPTRKA 604

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
            H      L  SP+   + L++ G ++ F  A  +R+       QPEFT L+   +  S 
Sbjct: 605 GHF---YSLVQSPQQFKQMLMSGGVDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSR 661

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + +M+     +R           S+        +    IT  EA  +Y   D   T    
Sbjct: 662 DGIMQLIEETLRY----------SWPKHLPKLQTPFRRITYEEALEKY-GNDKPDTRFGF 710

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
              +   +  ++++   +         I  R            +   +   +      L 
Sbjct: 711 LLNNVSEIIDKSEEYKGKYEGGLAAYAIVVRASEAFWNGAARKHYEGLGKDF---IGTLF 767

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                     +         ++ N   E  D  E    F
Sbjct: 768 VRKFGPATDVQDRLGKLLGEQVANEITEKFDLEENDLLF 806



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 55/189 (29%), Gaps = 36/189 (19%)

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE----PNLGINCCTILDRYP 242
           +  ++ D     L     G +V        I        +E              +  +P
Sbjct: 792 EITEKFDLEENDLLFLGIGPKVETRALLGRIRLDYHDFLVENVKMKKPNDYRFLWVIDFP 851

Query: 243 APESA--------------LANIYPADPRFTKR----------FELYACNIELCNACDEL 278
             E                  +I   D   T            ++L     E+      +
Sbjct: 852 LFERNRETNQLESVHHPFTQPHIDDLDNFATSCENLENIRSQAYDLVLNGQEVGGGSIRI 911

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            D   Q+   E+ ++         +      L+ L    P   GIA+G DRL+ ++  A 
Sbjct: 912 HDRDMQQFILEQILKI-------PHEHLSHLLSALESGCPPHGGIALGLDRLIAILCRAR 964

Query: 338 NINEVIWTP 346
           +I +VI  P
Sbjct: 965 SIRDVIAFP 973


>gi|195147520|ref|XP_002014727.1| GL18794 [Drosophila persimilis]
 gi|194106680|gb|EDW28723.1| GL18794 [Drosophila persimilis]
          Length = 1091

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 89/279 (31%), Gaps = 23/279 (8%)

Query: 13  DFHY-RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQ 69
           D  +   +  L  R+ +   +REY V    F+E+++ +L + +PG       F       
Sbjct: 533 DLRFNDMQHNLRLRSSVIMKMREYLVNYLGFVEVETPTLFRRTPGGAQE---FVVPTRKA 589

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
            H      L  SP+   + L++ G ++ F  A  +R+       QPEFT L+   +  S 
Sbjct: 590 GHF---YSLVQSPQQFKQMLMSGGVDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSR 646

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + +M+     +R           S+        +    IT  EA  +Y   D   T    
Sbjct: 647 DGIMQLIEETLRY----------SWPKHLPKLQTPFRRITYEEALEKY-GNDKPDTRFGF 695

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
              +   +  ++++   +         I  R            +   +   +      L 
Sbjct: 696 LLNNVSEIIDKSEEYKGKYEGGLAAYAIVVRASEAFWNGAARKHYEGLGKDF---IGTLF 752

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                     +         ++ N   E  D  E    F
Sbjct: 753 VRKFGPATDVQDRLGKLLGEQVANEITEKFDLEENDLLF 791



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 55/189 (29%), Gaps = 36/189 (19%)

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE----PNLGINCCTILDRYP 242
           +  ++ D     L     G +V        I        +E              +  +P
Sbjct: 777 EITEKFDLEENDLLFLGIGPKVETRALLGRIRLDYHDFLVENVKMKKPNDYRFLWVIDFP 836

Query: 243 APESA--------------LANIYPADPRFTKR----------FELYACNIELCNACDEL 278
             E                  +I   D   T            ++L     E+      +
Sbjct: 837 LFERNRETNQLESVHHPFTQPHIDDLDNFATSCENLENIRSQAYDLVLNGQEVGGGSIRI 896

Query: 279 LDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            D   Q+   E+ ++         +      L+ L    P   GIA+G DRL+ ++  A 
Sbjct: 897 HDRDMQQFILEQILKI-------PHEHLSHLLSALESGCPPHGGIALGLDRLIAILCRAR 949

Query: 338 NINEVIWTP 346
           +I +VI  P
Sbjct: 950 SIRDVIAFP 958


>gi|149278258|ref|ZP_01884396.1| aspartyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149231024|gb|EDM36405.1| aspartyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 581

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 78/232 (33%), Gaps = 12/232 (5%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  ++ R+ +  S+R Y  +  FIE+++  L   +P      R F     + + 
Sbjct: 131 LRRNPLRNNMVLRHRMAQSVRRYLDKLDFIEVETPVLIKSTPEG---ARDFVVPSRMNE- 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 187 -GQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFIEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIF-SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           ++     +IR   +            +              +       ++L   +   D
Sbjct: 246 ILNTFEGLIRTLFKEIKGIDLPEVPRMQYADAMRFYGSDKPDTRFDMRFVELNDMVKGKD 305

Query: 191 QP--DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
            P  D   L +    AG          ++   I   +I     I      D 
Sbjct: 306 FPVFDNAELVIGINAAGCAAYTRKQVDELTDFIKRPQIGATGLIYMRHNEDG 357



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R  +  +   +    L+E  E     +        P PE         
Sbjct: 403 ELRLEMGTRLGLRDKNTYSALWVLDFPLLEWDEETERYHAMHHPFTSPKPEDISLLDTAP 462

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++     E+      + D   Q   F      K   +   E        +  
Sbjct: 463 GAVRANAYDMVVNGTEIGGGSIRIHDRTLQALMF------KHLGFSPEEAQKQFGFLMDA 516

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P   GIA GFDRL  +  G ++I +VI  P
Sbjct: 517 FEFGAPPHGGIAFGFDRLCSIFAGLDSIRDVIAFP 551


>gi|78067521|ref|YP_370290.1| aspartyl-tRNA synthetase [Burkholderia sp. 383]
 gi|97196577|sp|Q39D20|SYD_BURS3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77968266|gb|ABB09646.1| aspartyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 600

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  + +            P  E              K +
Sbjct: 424 KANGLVHAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGAEEAQLKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 64/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++    T       
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRTNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +                          +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHIFKTTIDVELDATFPVMPYSEAMARFGSDKPDLRV-QLEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANAKDGRVA 323


>gi|115352827|ref|YP_774666.1| aspartyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322244|sp|Q0BBZ1|SYD_BURCM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|115282815|gb|ABI88332.1| aspartyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 600

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  + +            P  E              K +
Sbjct: 424 KANGLVQAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGAEEAQLKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +                          +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHIFKTTIDVELDATFPVMPYSEAMARFGSDKPDLRV-QLEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANAKDGRVA 323


>gi|296160991|ref|ZP_06843802.1| aspartyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295888690|gb|EFG68497.1| aspartyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 599

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y     FI+I++  L   +P     ++    T       
Sbjct: 133 RRPQMQHNLRLRYRVAIEVRKYLDAQGFIDIETPMLTKSTPEGARDYLVPSRTNP----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQPEFTQIDCETSFLSEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +         +                +   R   ++     D    
Sbjct: 247 IRDLFEAMIRHVFKETIGVTLDEKFPVMLYSEAMRRFGSDKPDLRVK-LEFTDLTDAVRD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANTKDGRVA 323



 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 44/145 (30%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  E +            P  E              K +
Sbjct: 424 KANGLVETGWKPLWVIDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFP 564


>gi|170699192|ref|ZP_02890245.1| aspartyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170734087|ref|YP_001766034.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|171317330|ref|ZP_02906526.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|172061684|ref|YP_001809336.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|254247242|ref|ZP_04940563.1| Aspartyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|238688609|sp|B1JYI9|SYD_BURCC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238692860|sp|B1YWF2|SYD_BURA4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|124872018|gb|EAY63734.1| Aspartyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|169817329|gb|ACA91912.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|170135917|gb|EDT04192.1| aspartyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|171097529|gb|EDT42367.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171994201|gb|ACB65120.1| aspartyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 600

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  + +            P  E              K +
Sbjct: 424 KANGLVQAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGAEEAQLKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 70/184 (38%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +     ++IR   +           ++    ++   +  +EA AR+ +   DL   L+  
Sbjct: 247 IRDLFEDMIRHIFKTT---------IDVELDAKFPVMPYSEAMARFGSDKPDLRVQLEFT 297

Query: 190 DQPD 193
           +  D
Sbjct: 298 ELTD 301


>gi|330896125|gb|EGH28346.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 397

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 51/162 (31%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N              P          
Sbjct: 213 EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFTALHHPFTAPKCTPEELEAN 272

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 273 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 327

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 328 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 369



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 49/138 (35%), Gaps = 11/138 (7%)

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  + E ++     +
Sbjct: 1   QSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETSFLNEEDIIGLTEKM 60

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +R   +                F +  ++T  EA  RY   D     +  +  D      
Sbjct: 61  VRQLFKEVLDL----------EFGDFPHMTFEEAMRRY-GSDKPDLRNPLELVDVADQLT 109

Query: 200 QAQQAGIRVAHDDTWSDI 217
             +        +D    +
Sbjct: 110 GVEFKVFSGPANDPKGRV 127


>gi|315604270|ref|ZP_07879336.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313976|gb|EFU62027.1| aspartate--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 601

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 72/220 (32%), Gaps = 24/220 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ +  + RE      F+EI++ +L   +P      R F     +    
Sbjct: 132 RREPEQYAIRLRSKVSRAAREALYARDFVEIETPTLTRSTPEG---ARDFIVPARLS--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ F  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GSWYALPQSPQLFKQLLMVAGMERYFQIARCYRDEDFRADRQPEFTQLDIEMSFVEQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGT 184
           ++   ++++    +    + +              +T  +A  R+          ++L  
Sbjct: 247 IEVAEDVLKNVWALIGYDLAT----------PIPRMTYRDAMERFGSDKPDLRFGLELTE 296

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
             D        +       A +           F +    
Sbjct: 297 LTDYFKDTPFRVFQAPYVGAVVMPGGGSQPRRTFDKWQEW 336



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 7/111 (6%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
             + +P+    + +  DP       +++     E+      +     Q   F+       
Sbjct: 452 HAFTSPKPEWMDSFDRDPAHALAYAYDIVCNGNEIGGGSIRIHRRDVQNRVFDVMGI--- 508

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L       P   G+A G+DR+V L+T + +I +VI  P
Sbjct: 509 -GEEEAQAQFGFLLDAFKFGAPPHGGVAFGWDRIVSLLTKSESIRDVIAFP 558


>gi|330936724|gb|EGH40909.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 379

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 51/162 (31%), Gaps = 8/162 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG--INCCTILDRYPAPESALANIY 252
             L     + G  +            +     E N              P          
Sbjct: 195 EALGALRIKIGNDLKLHTCEWAPMWVVDFPMFEENDDGSFTALHHPFTAPKCTPEELEAN 254

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           PA    ++ +++     EL      +     Q+  F    +      +E        L  
Sbjct: 255 PATA-LSRAYDMVLNGTELGGGSIRIHRKEMQQAVF----RLLGIAEDEQQEKFGFLLDA 309

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   G+A G DRLVML+TGA +I EVI  P +QS  +
Sbjct: 310 LKYGAPPHGGLAFGLDRLVMLMTGAQSIREVIAFPKTQSAAD 351


>gi|260887818|ref|ZP_05899081.1| aspartate--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330838613|ref|YP_004413193.1| aspartyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260862424|gb|EEX76924.1| aspartate--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329746377|gb|AEB99733.1| aspartyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 599

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 69/193 (35%), Gaps = 7/193 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                +  L+ R+ +   +R++   ++FIEI++  L + +P      R F     +    
Sbjct: 141 RRPEMQANLMLRHRVTKIMRDFLDRHEFIEIETPMLCKSTPEG---ARDFLVPSRLN--P 195

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ AG EK F     +R+ +     QPEFT L+   +      +
Sbjct: 196 GKFYALPQSPQIFKQILMVAGFEKYFQIVRCFRDEDLRADRQPEFTQLDIETSFLDENDI 255

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++    ++    +           +        E     +   R+  ++L    +     
Sbjct: 256 LELMEGLVAELFDKTLGIKLETPFLRMKWDEAMERFGSDKPDLRF-GMELMDISEYVKGS 314

Query: 193 DRHLLYLQAQQAG 205
           D  +     +  G
Sbjct: 315 DFKVFSSVLENGG 327



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 13/164 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++ G+  A    +  +    + E  E              P  E     +   
Sbjct: 414 ELRLEMARRRGLIDADALKFLWVTDFPMFEYNEEEKRWKAMHHPFTAPRREDVEYLMSDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  +++    +E+      +     Q   FE     + + ++K     + +D    
Sbjct: 474 GRVKANAYDMVLNGVEIGGGSLRIYQGDLQEKVFEAIGLTQEEARQKFG---FMMD---- 526

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  P   GIA G DRLVML+    +I +VI  P +QS  +
Sbjct: 527 -AFEYGTPPHGGIAFGLDRLVMLMAKRRSIRDVIAFPKTQSASD 569


>gi|91781802|ref|YP_557008.1| aspartyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123359170|sp|Q145N3|SYD_BURXL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91685756|gb|ABE28956.1| aspartyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 599

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +   +R+Y     FI+I++  L   +P     ++    T       
Sbjct: 133 RRPQMQHNLRLRYRVAIEVRKYLDAQGFIDIETPMLTKSTPEGARDYLVPSRTNP----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQPEFTQIDCETSFLSEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR   +         +                +   R   ++     D    
Sbjct: 247 IRDLFEAMIRHVFKETIGVTLDEKFPVMLYSEAMRRFGSDKPDLRVK-LEFTDLTDAVRD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANTKDGRVA 323



 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 44/145 (30%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  E +            P  E              K +
Sbjct: 424 KANGLVESGWKPLWVIDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFP 564


>gi|239917780|ref|YP_002957338.1| aspartyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281413727|ref|ZP_06245469.1| aspartyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259511865|sp|C5CCH2|SYD_MICLC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|239838987|gb|ACS30784.1| aspartyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 604

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 68/195 (34%), Gaps = 22/195 (11%)

Query: 11  NRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            R  +   RRP     +  R+ +  + RE      F+E+++ +L   +P      R F  
Sbjct: 120 LRHRYLDLRRPQPSRIMRLRSEVNRTARELLHGEGFVEVETPTLTRSTPEG---ARDFLV 176

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +         L  SP+   + L   G EK +  A  +R+ +     QPEFT L+   
Sbjct: 177 PARL--APGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQPEFTQLDIEA 234

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    + ++     I++    +             +  +    +T AEA  +Y   D   
Sbjct: 235 SFVEQDDVIALGEKIVKALWALVG----------VDVPTPIRRMTYAEAMEKY-GSDKPD 283

Query: 185 TLDNPDQPDRHLLYL 199
                +  D    + 
Sbjct: 284 LRFGLELTDLTEYFK 298



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 17/116 (14%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE------K 290
             + +P+   A+ + ADP       +++     E+      +     Q   FE      +
Sbjct: 457 HAFTSPKPEFADTFDADPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFEVMGLSPE 516

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E  EK     E +             P   GIA G+DR+V L+ G ++I EVI  P
Sbjct: 517 EANEKFGFLLEGFK---------YGAPPHGGIAFGWDRVVALLAGTDSIREVIAFP 563


>gi|45201302|ref|NP_986872.1| AGR206Cp [Ashbya gossypii ATCC 10895]
 gi|44986156|gb|AAS54696.1| AGR206Cp [Ashbya gossypii ATCC 10895]
          Length = 651

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 80/264 (30%), Gaps = 12/264 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +    +      +  +  R+    ++R    +  F+E+++  L + +P      R F 
Sbjct: 148 PPEYRHLQLRLPAFQARMKMRHNASKTVRASLEKLGFMEVETPLLFKSTPEG---AREFL 204

Query: 64  TELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
                +       Y L  SP+   + L+A G  K +  A  +R+ +     QPEFT ++ 
Sbjct: 205 VPTRHKQGKDPLFYALPQSPQQYKQLLMAGGVSKYYQLARCFRDEDLRSDRQPEFTQVDL 264

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVA------NQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
             A  + + +M+   + +             +    +   V C P +    +T  +   +
Sbjct: 265 EMAFANGDDVMRVVESTVLNTWNEVALSGKLHTLDKALNIVPCGPDTPVSRLTYHQVMTQ 324

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAG-IRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
           Y          +    D     +         V       + F      K       +  
Sbjct: 325 YGIDKPDLRFKDLKIVDLSEFNVHGHMHKQFPVFEILILRNAFDTPEDFKKHWTHLSDPN 384

Query: 236 TILDRYPAPESALANIYPADPRFT 259
               R P           ++   +
Sbjct: 385 EYNYRKPIVVPITDTKLESNWFES 408



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           + ++     +EL      + DP+ QR+ F + ++      NE        L   +   P 
Sbjct: 536 QHYDFVVNGVELGGGSTRVHDPVLQRYIFNQILKI----NNEDQVF-GHLLEAFSMGTPP 590

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +G A+GFDR+V ++    +I +VI  P
Sbjct: 591 HAGFAIGFDRMVAMMCAKESIRDVIAFP 618


>gi|257790368|ref|YP_003180974.1| aspartyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|325833720|ref|ZP_08166135.1| aspartate--tRNA ligase [Eggerthella sp. HGA1]
 gi|257474265|gb|ACV54585.1| aspartyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|325485260|gb|EGC87730.1| aspartate--tRNA ligase [Eggerthella sp. HGA1]
          Length = 592

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 8/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
                   L  R+ +  ++R    E  F+E+++  L   +P      R +          
Sbjct: 143 RRPEMYQALHLRHKVAQAMRGALNERGFLEVETPILANSTPEG---ARDYIVPSRPN--P 197

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT ++        E +
Sbjct: 198 GRFYALPQSPQQFKQMLMVGGIERYYQIARCFRDEDLRADRQPEFTQVDIEMGFVQGEDV 257

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M    +++         +      +    + E       +       ++L    D     
Sbjct: 258 MNLMEDVMAETLAAVGVEH--AFPLQRMQYRESMDRFGNDRPDTRFGMELVDITDIVKNT 315

Query: 193 DRHLLYLQAQQAGI 206
              +    AQ  G+
Sbjct: 316 GFKVFSSVAQSGGV 329



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 44/145 (30%), Gaps = 5/145 (3%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
                  + +  + +  E             +   E             +  ++L     
Sbjct: 430 EGHQLLWVVNFPMFKYDEDEKKYAAEHHPFTHVLDEDVDKIESDPLACGSYSYDLVMDGF 489

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDR 328
           E+      + +  EQR               E        +  L    P   GIA+G DR
Sbjct: 490 EVGGGTIRIHNADEQRAVLRTCGLT----DEEIEEKFGHLIHALELGAPPHGGIALGLDR 545

Query: 329 LVMLVTGANNINEVIWTPFSQSNQE 353
           LVML+ G  +I +VI  P + S  +
Sbjct: 546 LVMLLGGKASIRDVIAFPKTSSASD 570


>gi|227505013|ref|ZP_03935062.1| aspartyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198377|gb|EEI78425.1| aspartyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 596

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 71/221 (32%), Gaps = 27/221 (12%)

Query: 16  YRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR+     L  R+    + RE    + F EI++ +L   +P      R F     +   
Sbjct: 128 LRRKTQGDALRLRSEANRAAREVLARHDFTEIETPTLTRSTPEG---ARDFLVPARL--K 182

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    + 
Sbjct: 183 PGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDD 242

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLG 183
           ++     I+    ++   +I +              +T A+A   Y          I + 
Sbjct: 243 VIALAEEIVSALWKLIGYEITT----------PIPRMTYADAMKYYGSDKPDLRFGIKIV 292

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
              D        +   +   A +           F      
Sbjct: 293 ECTDFFKDTTFRVFQNEYVGAVVMEGGASQPRRQFDAWQEW 333



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 37/119 (31%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +            P PE   +            +++     E+      +     Q+  F
Sbjct: 441 HSKWTAVHHAFTSPKPEYLDSFDKEPGEALAYAYDIVCNGNEIGGGSIRIHQQDVQKRVF 500

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +           E        L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 501 DVMGI----GEEEAQEKFGFLLDAFQYGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 555


>gi|121593296|ref|YP_985192.1| aspartyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|222110018|ref|YP_002552282.1| aspartyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|166225313|sp|A1W4E1|SYD_ACISJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781730|sp|B9ME28|SYD_DIAST RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120605376|gb|ABM41116.1| aspartyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|221729462|gb|ACM32282.1| aspartyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 603

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 48/157 (30%), Gaps = 14/157 (8%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+   +      +    + E  E              P                 K 
Sbjct: 427 KKNGL-FENRWAPLWVVDFPMFEHDEEEDRWVAVHHPFTSPKDGHENLMDTDPGKCIAKA 485

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEM----QEKKKIYNETYPIDEDFLACL-TEM 316
           +++     EL      +     Q   F         ++ K            L  L    
Sbjct: 486 YDMVLNGWELGGGSVRIHRADVQAKVFAALNIGPEDQRAKFG--------YLLDALQYGA 537

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G+A G DRL+ L+TGA +I +VI  P +Q  Q+
Sbjct: 538 PPHGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQD 574



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 67/184 (36%), Gaps = 20/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  ++ R      +R +  +  FI+I++  L + +P     ++            
Sbjct: 133 RRPYMQRNMMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVPSRVHD----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 188 -GQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEEE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +I+             Q        E   +T  EA  R+ +   DL   L+  
Sbjct: 247 IRAIFQRMIKEVF----------QQQLGVDLGEFPTMTYQEAAHRFGSDKPDLRVKLEFT 296

Query: 190 DQPD 193
           +  D
Sbjct: 297 ELTD 300


>gi|118617364|ref|YP_905696.1| aspartyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118569474|gb|ABL04225.1| aspartyl-tRNA synthetase AspS [Mycobacterium ulcerans Agy99]
          Length = 593

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 70/211 (33%), Gaps = 30/211 (14%)

Query: 3   QIP---SQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P    +P    +   + R            +  R+ + ++ R     + F+EI++ ++
Sbjct: 108 PLPFQLDEPAG-EELRLKYRYLDLRRDGPASAIRLRSKVNAAARAVLAGHDFVEIETPTI 166

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              +P      R F     +         L  SP+   + L+ AG E+ +  A  +R+ +
Sbjct: 167 TRSTPEG---ARDFLVPARLH--PGMFYALPQSPQLFKQLLMVAGMERYYQIARCYRDED 221

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                QPEFT L+   +    E ++     I+     +   +I +              I
Sbjct: 222 FRADRQPEFTQLDMELSFVDVEDIIAVSEEILTALWALIGYRIPT----------PTPRI 271

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           + A+A  R+ +                    
Sbjct: 272 SYADAMRRFGSDKPDLRFGLELVECAEFFKD 302



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + AP+  L +   +DP       +++     E+      +     Q   F      K   
Sbjct: 453 FTAPKPELEDRIESDPGSVLADAYDIVCNGHEIGGGSIRIHRRDIQERVFAVMGLSKA-- 510

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L  LT   P   GIA G+DR+  L+ GA++I +VI  P
Sbjct: 511 --EAEEKFGFLLEALTFGAPPHGGIAFGWDRVSTLLAGADSIRDVIAFP 557


>gi|91205164|ref|YP_537519.1| aspartyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157827498|ref|YP_001496562.1| aspartyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|123084585|sp|Q1RJN4|SYD_RICBR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225383|sp|A8GXC5|SYD_RICB8 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91068708|gb|ABE04430.1| Aspartyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157802802|gb|ABV79525.1| aspartyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 602

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 63/195 (32%), Gaps = 18/195 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ I S +R+      F E  +  L   SP      R F   
Sbjct: 128 KHRFLDLRREKLHNNIMLRSQIISYIRQLMTARGFTEFQTPILTASSPEG---ARDFLVP 184

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+  
Sbjct: 185 SRLH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDIE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  +           I    E    ++F+         +    I   E+  +Y   D  
Sbjct: 242 MSFVT--------QEDIFSTIEPVMYELFTKFTDKKVSEAPFIRIPYNESMLKY-GSDKP 292

Query: 184 TTLDNPDQPDRHLLY 198
              +     D   ++
Sbjct: 293 DLRNPIVIADVTEIF 307



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 52/167 (31%), Gaps = 15/167 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP----APESALAN 250
            +    A +  +       +  I      E  E    I+        P            
Sbjct: 411 KVRIKLADELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGLEALENAKT 470

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF- 309
                     ++++    IEL +       P      F          Y+E   +D+ F 
Sbjct: 471 TEELLELTAYQYDIVCNGIELSSGAVRNHKPEIMYKAFAI------AGYSEE-EVDKRFG 523

Query: 310 --LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             +       P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 524 GMIRAFKFGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 570


>gi|58697338|ref|ZP_00372686.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536284|gb|EAL59797.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 501

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 63/173 (36%), Gaps = 18/173 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + R  ++ R+ I + LR+  +E  F+EI +  L   SP     ++            
Sbjct: 146 RREKVRNNIILRSQIIAELRKLMIERGFLEIQTPILTASSPEGARDYLVPSRLNPGKFYA 205

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  + E
Sbjct: 206 LPQ------APQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMSFVTQE 259

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            + +   + +       ++K                 IT  EA  +Y +    
Sbjct: 260 DIFQIIESTLYRVFAKFSRKSVDKD---------FPRITYKEAMLKYGSDKPD 303


>gi|58698523|ref|ZP_00373426.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630146|ref|YP_002726937.1| aspartyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254781763|sp|C0R2K4|SYD_WOLWR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|58534965|gb|EAL59061.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592127|gb|ACN95146.1| aspartyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 600

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 63/173 (36%), Gaps = 18/173 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + R  ++ R+ I + LR+  +E  F+EI +  L   SP     ++            
Sbjct: 146 RREKVRNNIILRSQIIAELRKLMIERGFLEIQTPILTASSPEGARDYLVPSRLNPGKFYA 205

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  + E
Sbjct: 206 LPQ------APQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMSFVTQE 259

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            + +   + +       ++K                 IT  EA  +Y +    
Sbjct: 260 DIFQIIESTLYRVFAKFSRKSVDKD---------FPRITYKEAMLKYGSDKPD 303



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 56/201 (27%), Gaps = 18/201 (8%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
           +              NI+ G ++      +     +  +   +  +      D   +   
Sbjct: 384 KFLDENRLNHIREATNIEPGDSVFFASDKENEAANIAGKVRTLLGSELSLIDDNIFKFCW 443

Query: 224 EKIEPNLGINCCTILDRY---PAPESALANIYPADPR----FTKRFELYACNIELCNACD 276
               P    +  +    +   P            D         +++L    IEL +   
Sbjct: 444 IIDFPYFVYDDKSKKIDFFHNPFSMPHGGLKDLEDKNPLDILAYQYDLVCNGIELSSGAI 503

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVML 332
                      F                +D  F   +      +P   GIA G DR+VML
Sbjct: 504 RNNKLDIMYKAF-------AIAGYSRGEVDTRFGALVRAFRFGVPPHGGIAPGVDRIVML 556

Query: 333 VTGANNINEVIWTPFSQSNQE 353
           +    NI EVI  P +Q  ++
Sbjct: 557 LADEPNIREVICFPMNQQGED 577


>gi|107023660|ref|YP_621987.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690745|ref|YP_836368.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123244665|sp|Q1BTP1|SYD_BURCA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225325|sp|A0KAE8|SYD_BURCH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|105893849|gb|ABF77014.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116648834|gb|ABK09475.1| aspartyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 600

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 5/152 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  + +            P  E              K +
Sbjct: 424 KANGLVQAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGAEEAQLKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           IA G DR+V ++ GA++I +VI  P +Q  Q+
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFPKTQRAQD 571



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 70/184 (38%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +     ++IR   +           ++    ++   +  +EA AR+ +   DL   L+  
Sbjct: 247 IRDLFEDMIRHIFKTT---------IDVELDAKFPVMPYSEAMARFGSDKPDLRVQLEFT 297

Query: 190 DQPD 193
           +  D
Sbjct: 298 ELTD 301


>gi|298372345|ref|ZP_06982335.1| aspartate--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275249|gb|EFI16800.1| aspartate--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 583

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 69/200 (34%), Gaps = 23/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +    R Y     F+E+++  L   +P      R F     +   
Sbjct: 131 LRRNSVRANLELRHKMAFETRRYLDSLHFLEVETPVLIKSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++K                +  F+ +          ++ A+A  RY   D   T      
Sbjct: 246 IIKTFE----------GLTVHLFKTIKNIELQPFPRMSFADAM-RYYGSDKPDTRFEMRF 294

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  D
Sbjct: 295 VE---LMDTLKGYGFSVFDD 311



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R  +  +   +    L+E  E              P PE         
Sbjct: 404 ELRLEMGSRLGLRDKNKYSCLWVVDFPLLEWDEETNRYYAMHHPFTSPKPEDIPLLDSEP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-CL 313
                  +++    +E+      + D   Q+  F  ++       NE       FL    
Sbjct: 464 GKVRANAYDMVINGVEVGGGSIRIHDSGLQKKMF--QVL---GFTNEQAEYQFGFLTNAF 518

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA G DR V L  G ++I + I  P
Sbjct: 519 KYGAPPHGGIAYGLDRFVSLFAGLDSIRDCIAFP 552


>gi|225677284|ref|ZP_03788266.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590676|gb|EEH11921.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 600

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 18/173 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + R  ++ R+ I + LR+  +E  F+EI +  L   SP     ++            
Sbjct: 146 RREKVRNNIILRSQIIAELRKLMIERGFLEIQTPILTASSPEGARDYLVPSRLNPGKFYA 205

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  + E
Sbjct: 206 LPQ------APQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMSFVTQE 259

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +     + +       ++K                 IT  EA  +Y +    
Sbjct: 260 DIFDVIESALYKVFAKFSRKSVDKD---------FPRITYKEAMLKYGSDKPD 303



 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 60/202 (29%), Gaps = 20/202 (9%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
           +              NI+ G ++      +     +  +   +  +      D   +   
Sbjct: 384 KFLDENRLNHIREATNIEPGDSVFFASDKENEAANIAGKVRTLLGSELSLIDDNIFKFCW 443

Query: 224 EKIEPNLGINCCTILDRY---PAPESA-----LANIYPADPRFTKRFELYACNIELCNAC 275
               P    +  +    +   P          L    P D     +++L    IEL +  
Sbjct: 444 IIDFPYFVYDDKSKKIDFFHNPFSMPHGGLKDLEEKNPLDI-LAYQYDLVCNGIELSSGA 502

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVM 331
                       F      K+        +D  F   +      +P   GIA G DR+VM
Sbjct: 503 IRNNKLDIMYKAFAIAGYSKE-------EVDTKFGALVRAFRFGVPPHGGIAPGVDRIVM 555

Query: 332 LVTGANNINEVIWTPFSQSNQE 353
           L+    NI EVI  P +Q  ++
Sbjct: 556 LLADEPNIREVICFPMNQQGED 577


>gi|67624611|ref|XP_668588.1| aspartate--tRNA ligase [Cryptosporidium hominis TU502]
 gi|54659788|gb|EAL38351.1| aspartate--tRNA ligase [Cryptosporidium hominis]
          Length = 435

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 65/218 (29%), Gaps = 32/218 (14%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
            +D     R               ++ +   LRE+  E +FIEI +  L     +E+   
Sbjct: 202 LQDVRLDNRVLDLRTYLSQAIFRIQSEVCRLLREFLTEREFIEIHTPKLLP-GASESGAT 260

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F       D+      L  SP+   +  +    E++F     +R        H  EF  
Sbjct: 261 VFKV-----DYFSNTACLAQSPQLHKQMSICGDLERVFEIGPVFRAENSNTHRHLCEFVG 315

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++     E+    + D  + +              + +  + ++      ++E   R   
Sbjct: 316 VDIEMNIENTYHELVDVFDAMFRHIFRGINTHCKNELLIVSEYNPFTPFVISEKTPRLT- 374

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
                                 ++AG  +  D +  DI
Sbjct: 375 --------------FEEGCNLLKEAGAEIPEDLSDFDI 398


>gi|296421241|ref|XP_002840174.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636387|emb|CAZ84365.1| unnamed protein product [Tuber melanosporum]
          Length = 593

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 75/234 (32%), Gaps = 21/234 (8%)

Query: 14  FHYRRRPF------LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTEL 66
            H + R        L  R+   S  R++  EN F+E+++  L + +P      R F    
Sbjct: 121 RHLQLRTTKELCIALRLRSRTASECRKFLEENDFLEVETPLLFKSTPEG---AREFLVPT 177

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
              D       L  SP+   + L+A+G  + +  A  +R+ +     QPEFT L+   + 
Sbjct: 178 RKGD--GTCYALPQSPQQYKQILMASGVPRYYQLAKCFRDEDLRADRQPEFTQLDLEMSF 235

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
            + + +M     ++    +                    + +    A   Y         
Sbjct: 236 ATSDDVMDLVEGLVIRIWKNVLDVCVGPG---------FKRVPYWWAMKNYGTDKPDFRY 286

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
            N    + H +     +    V     + +  +  +   IE         +  R
Sbjct: 287 PNHRIKNLHEVLPYLAKGDRFVEGFAFYGNTPNYNMDHAIEFLEKFKRENLSTR 340



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 7/91 (7%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE-KKKIYNETYPIDEDFLACL-TE 315
             + ++L     EL      + +   Q++  EK ++  ++K+       D   L  L + 
Sbjct: 479 RAEHYDLVVNGTELGGGSRRIHEAALQKYILEKVLKMPREKL----QQFD-HLLEVLDSG 533

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P  +GIA+GFDRL+ ++ G ++I +VI  P
Sbjct: 534 CPPHAGIALGFDRLIAVMMGRDSIRDVIAFP 564


>gi|294085457|ref|YP_003552217.1| aspartyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665032|gb|ADE40133.1| aspartyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 590

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 61/205 (29%), Gaps = 9/205 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    ++ R  I  S+R   V+  F E  +  L   SP      R F     +    
Sbjct: 134 RRSRPHANIMLRAQIIQSIRARMVDQGFTEFQTPILTASSPEG---ARDFLVPARLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ +G ++ F  A  +R+ +      P EF  L+   +    +
Sbjct: 188 PGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLEMSFVEQQ 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      +IR   E  + K      V+             +   R        T    D
Sbjct: 248 DVFNAVEPVIRGVFEEFSDKDCGEDWVHIPFAESMLKYGNDKPDLRIPFEISDVTEIFRD 307

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWS 215
                      + A +R        
Sbjct: 308 SGFSIFAKNIEKGAVVRAVPGPKCG 332



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 47/138 (34%), Gaps = 11/138 (7%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           ++ I    + EK E    I+        P                  +++L    +EL +
Sbjct: 425 FAWIVDFPMFEKDEVTGKIDFSHNPFSMPQGGMQALLEMNPLDIKAWQYDLVCNGVELSS 484

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRL 329
                  P      FE         Y+ +  +D+ F   +       P   GIA G DR+
Sbjct: 485 GAIRNHLPEVMYKAFEI------AGYDNS-VVDDKFPAMINAFRFGAPPHGGIAPGIDRM 537

Query: 330 VMLVTGANNINEVIWTPF 347
           VML+    NI EVI  P 
Sbjct: 538 VMLIADEPNIREVILFPM 555


>gi|258647273|ref|ZP_05734742.1| aspartate--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260852926|gb|EEX72795.1| aspartate--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 590

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 74/223 (33%), Gaps = 13/223 (5%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  +  R+ +   +R +  E  F+EI++ +L   +P      R F     +   
Sbjct: 131 LRRNCVRRNMELRHKMTLEVRRFLDEKGFLEIETPALIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    +
Sbjct: 186 -PGCFYALPQSPQTLKQLLMVAGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQD 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     + +   +         +      ++E      ++       ++    +D   
Sbjct: 245 DVINTFEEMTKYLFKSVRGVDLGEEPFLRLSWAEAMRRFGSDKPDMRFGMEFVELMDQLK 304

Query: 191 QPDRHLLYLQAQQAGIRVAHDD--TWSDIFSRILIEKIEPNLG 231
                 ++ +A   G                 +      P +G
Sbjct: 305 GTGTFGVFNEAVYIGGICVPGCAVYTRKQLDELTDFVRSPQIG 347



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 45/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L  L   + G+R  +      +    + E  E    +         P PE         
Sbjct: 407 ELRLLMGGRLGLRDKNKFALLWVVDFPMFEWSEEESRLMAMHHPFTAPKPEDVGLLDSAP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
           +      +++    +E+      + D   Q   F      K   +            +  
Sbjct: 467 ERVCANAYDMVCNGVEVGGGSIRIHDAELQAKIF------KALGFTQESAQEQFGFLMNA 520

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P   G+A G DR V +  G ++I + I  P
Sbjct: 521 FKYGAPPHGGLAYGLDRWVSIFAGLDSIRDCIAFP 555


>gi|300934546|ref|ZP_07149802.1| aspartyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 596

 Score = 97.0 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 21/189 (11%)

Query: 16  YRRR---PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR+     L  R+ + ++ R     + F EI++ +L   +P      R F     ++  
Sbjct: 133 LRRKAQGDALRLRSKVNAAARGVLARHDFTEIETPTLTRSTPEG---ARDFLVPARLK-- 187

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    E
Sbjct: 188 -PGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQE 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     I+    +    +I +              +T A+A   Y +       D   
Sbjct: 247 DVIALAEEILVAIWKEIGYEIST----------PIPRMTYADAMRLYGSDKPDLRFDIQI 296

Query: 191 QPDRHLLYL 199
                    
Sbjct: 297 TECTEFFKD 305



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 15/113 (13%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE----KEMQE 294
           + +P+    + +  DP       +++     E+      +     Q   F+     E + 
Sbjct: 456 FTSPKPEYLDTFDEDPGSALAYAYDIVCNGNEIGGGSIRIHRHDIQERVFKVMGISEEEA 515

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           ++K            L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 516 REKFG--------FLLDAFAFGAPPHGGIAFGWDRIVSLLGGFSSIRDVIAFP 560


>gi|116335020|ref|YP_802515.1| lysyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
 gi|116235301|dbj|BAF35149.1| lysyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
          Length = 381

 Score = 96.6 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 25/280 (8%)

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F T      + +K  YL+ SPE S KK+L+     I+  ++ +RN     +H  EF MLE
Sbjct: 123 FKT---FNFYKKKFFYLKISPELSIKKILSCNYNNIYELSNCFRNEGVSNIHNFEFLMLE 179

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
           +Y ++ S+   +      I+    + +   F+   +  +     +  ++ E     A   
Sbjct: 180 YYSSNFSFRNSISFLELFIKNIFLIHSIFFFNIYKIIFSIKQFFKKKSIIELLCLVAKKK 239

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L N      +LL+    +  I++      S +  ++    I  N   N    +  Y
Sbjct: 240 NIKFLKNT-----NLLFYFLIKKNIKILKSFFLSSLIFKLFDNIIIKNY--NLPIFVKSY 292

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
               S L+     + +F KRFELY  +IE+ N  +EL D   Q+  F K+ +        
Sbjct: 293 TTKNSLLSKPNFLNFKFAKRFELYISSIEISNGFNELNDYFLQKINFNKKNK-------- 344

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
                 DFL+ +   +   +G+ +G +RL+ML+    NI 
Sbjct: 345 ------DFLSYIKKGLQNFNGVGIGINRLLMLMYKIKNIK 378


>gi|31544389|ref|NP_852967.1| aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|31541233|gb|AAP56535.1| Aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930432|gb|ADC30371.1| Aspartyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 582

 Score = 96.6 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 77/256 (30%), Gaps = 23/256 (8%)

Query: 11  NRDFHYR------RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
             +   +      RRP L K    R+     +R +     FIEI++  L   +P      
Sbjct: 119 LEEVRLKYRYLDLRRPVLQKNMKLRSDFFLIVRNFLTSQGFIEIETPILSKTTPEGAR-- 176

Query: 60  RAFSTELIIQDHIRKPLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
                + ++   +   ++  L  S +   + L+ +G E+ F  +  +R+ +     QPE 
Sbjct: 177 -----DYVVPSRLGPNMFYALPQSAQIYKQLLMISGFERYFQISRCFRDEDLRKDRQPEH 231

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
             ++   +  S EQ  K    +     +           +  +           +   R+
Sbjct: 232 VQIDMEVSFMSKEQFFKLVEAMFIHIFDRLMNVKIEPNFMRMSYDEAMNRFGTDKPDLRF 291

Query: 178 AN--IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC 235
               +D+G    + +        L+ +   I +           ++L +  + N      
Sbjct: 292 GCELVDVGAAFVDHEFSVFKQFALKNRLKAIVLDEILISYKEH-KVLEKYAKDNYAKGLS 350

Query: 236 TILDRYPAPESALANI 251
                           
Sbjct: 351 WFSYDQNQIIDGSIKR 366



 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 51/173 (29%), Gaps = 12/173 (6%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +   D    ++      R  L    Q A           D       +K           
Sbjct: 387 FVGDDDLNVINKSLGAVRSQLNELYQLANEDEYKFLWIVDWPLYEWDDK---TNSYQSAH 443

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            L   P  +                ++L     EL +    + DP  Q+           
Sbjct: 444 NLFTAPEAKYLSTFNEDKANAKAASYDLVLNGFELGSGAIRITDPSLQK------AVMSS 497

Query: 297 KIYNETYPIDED--FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              +E    D+    L       PQ  GI +G DRL+M++T + +I +VI  P
Sbjct: 498 LGLSEAEMNDKFGFLLDAYQYGAPQHCGIGLGSDRLLMILTKSKSIRDVIAFP 550


>gi|120403600|ref|YP_953429.1| aspartyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119956418|gb|ABM13423.1| aspartyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 601

 Score = 96.6 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 24/184 (13%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR      +  R+ + ++ R    E+ F+EI++ +L   +P      R F     +Q   
Sbjct: 139 RREVPGNAIRLRSKVNAAARSVLAEHDFVEIETPTLTRSTPEG---ARDFLVPARLQ--- 192

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    + 
Sbjct: 193 PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDADD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           ++     I++    +             +       I+ A+A  R+ +   D+   L+  
Sbjct: 253 VIAVSEQILKAIWALIG----------YDLPLPLPRISHADAMRRFGSDKPDMRFGLELV 302

Query: 190 DQPD 193
           +  D
Sbjct: 303 ECTD 306



 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 5/106 (4%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P PES               +++     E+      +     Q   F     +    ++E
Sbjct: 464 PKPESEATFDTDPGSAMADAYDIVCNGNEIGGGSIRIHRSDIQERVFAMMGID----HDE 519

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   L   T   P   GIA G+DR+V L+ G ++I EVI  P
Sbjct: 520 ARDKFGFLLDAFTFGAPPHGGIAFGWDRIVALLAGLDSIREVIAFP 565


>gi|254227127|ref|ZP_04920674.1| aspartyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125620351|gb|EAZ48738.1| aspartyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 252

 Score = 96.6 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 49/129 (37%), Gaps = 8/129 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +   + F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + EQ
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQ 243

Query: 132 LMKDCMNII 140
           +      +I
Sbjct: 244 VRAVTEKMI 252


>gi|291545264|emb|CBL18373.1| aspartyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 596

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 15/177 (8%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             +  N ++    +    A + G+          I    + E+ E              P
Sbjct: 394 ADSKKNAEKFAGQIRTEVANRMGLIDNDRFEICWIVDFPMYEEDEETGKPIFTHNPFSMP 453

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKK 296
             E    N          ++++    +EL +      DP      FE      +++  K 
Sbjct: 454 QGELEALNTKNPCDVLAYQYDVVCNGVELASGAVRNHDPEVMVKAFEIAGYTEEDVAAKF 513

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 +             P  +G+A G DR++ML+    +I EVI  P + + Q+
Sbjct: 514 GALYSAFKF---------GAPPHAGMAFGIDRMIMLLLDEESIREVIAFPLNSNAQD 561



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 63/173 (36%), Gaps = 17/173 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
            ++R    ++ R+ I S +RE      F+E+ +  L   SP     ++            
Sbjct: 135 RNHRVHQNIVFRSNIMSFMREKMTSLGFLELQTPILSTSSPEGARDYLIPSRKHHGKFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   +  + +G +K F  A  +R+ +      P EF  L+   +  + E
Sbjct: 195 LPQ------APQIFKQLYMVSGFDKYFQLAPCFRDEDARADRTPGEFYQLDLEMSFATQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           ++      +     E  + K F+              IT A+A  +Y +    
Sbjct: 249 EVFAVAEEVFPAIIEKFSNKPFTKG--------PFPRITYADAMLKYGSDKPD 293


>gi|268317897|ref|YP_003291616.1| aspartyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262335431|gb|ACY49228.1| aspartyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 619

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 65/187 (34%), Gaps = 17/187 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  LL R+ +    R YF  +QF+E+++  L   +P      R F     +    
Sbjct: 152 RRPELQRNLLLRHQVYLITRRYFDAHQFVEVETPVLTKSTPEG---ARDFLVPSRLH--- 205

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG ++ F     +R+ +     QPEFT ++      + EQ
Sbjct: 206 PGKFYALPQSPQLYKQILMVAGLDRYFQIVKCFRDEDLRADRQPEFTQIDVEMTFPTEEQ 265

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +I+                          ++  EA  R+ +    T      Q
Sbjct: 266 IFELIEGLIQAIWRETLGVELP---------RPFPRMSYDEALRRFGSDKPDTRFGLELQ 316

Query: 192 PDRHLLY 198
               +  
Sbjct: 317 EIGEVFR 323



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 55/168 (32%), Gaps = 30/168 (17%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A++  +                   +E +           +P       + +P D    +
Sbjct: 436 ARELNLVPPAGQAPWHFLWVTDFPLLEWDEEAGR-YFAMHHP-----FTSPHPDDLDLLE 489

Query: 261 R---------FELYACNIELCNACDELLDPIEQRHRF-----EKEMQEKKKIYNETYPID 306
                     ++L     E+      +     QR  F     ++E  E++          
Sbjct: 490 TEPGRVRARAYDLVLNGNEIGGGSIRIHRQDIQRRMFRVLGIDEEEAERRFG-------- 541

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              L       P   GIA+G DR+VML+ GA ++ +VI  P +Q  QE
Sbjct: 542 -FLLTAFRYGAPPHGGIALGLDRIVMLLAGAGSLRDVIAFPKTQRGQE 588


>gi|312199922|ref|YP_004019983.1| aspartyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311231258|gb|ADP84113.1| aspartyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 597

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 64/188 (34%), Gaps = 19/188 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
              R +  L  R+ + +++R       F+E+++  L   +P      R F          
Sbjct: 145 RRERMQRNLRIRSTVLAAIRTALSPLGFVEVETPLLMPSTPEG---AREFIVPSRQ---F 198

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G ++ F FA   R+ +     Q EFT L+   +    + 
Sbjct: 199 PGSFYALPQSPQLFKQLLMVGGADRYFQFARCLRDEDLRADRQYEFTQLDLEMSFVDQQD 258

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++    + +  A E                    E +T   A  RY  +D        + 
Sbjct: 259 VLDVITSAVLAATEAITGGPVP----------PVETMTWQHAMDRY-GVDKPDLRFGMEL 307

Query: 192 PDRHLLYL 199
            +   ++ 
Sbjct: 308 VELTEVFA 315



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 15/122 (12%)

Query: 240 RYPAPESALANIYPADPRFTKR-------FELYACNIELCNACDELLDPIEQRHRFEKEM 292
            +P       +    D   T+        ++L     EL +    + +P  Q+  F+   
Sbjct: 455 HHPF---TRPHPDDLDKLETEPLQVRSRAYDLVLNGWELGSGSIRIHEPELQQRIFDLIG 511

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
             ++    E       FL       P   G A G DRLV  + G  NI EVI  P +QS 
Sbjct: 512 ISRE----EADRRFGFFLTPFGYGAPPHGGFAFGIDRLVASLAGEENIREVIAFPKTQSG 567

Query: 352 QE 353
            +
Sbjct: 568 LD 569


>gi|308272199|emb|CBX28805.1| Aspartyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 604

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 76/203 (37%), Gaps = 14/203 (6%)

Query: 11  NRDFHYR-RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFS 63
            ++ H   RRP     L+ R+   +S+R+Y     FI+I++  L   +P     ++    
Sbjct: 142 LKNRHIDLRRPNIQKNLILRHKSAASVRKYLNGLGFIDIETPVLTKSTPEGARDYLVPSR 201

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
               +   + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++  
Sbjct: 202 INPGMFYALPQ------SPQIFKQLLMISGFDRYYQIVRCFRDEDLRADRQPEFTQIDIE 255

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +    + +M     +I+   +    K      +        +   + +   R+  ++L 
Sbjct: 256 MSFVGEDDVMDLAEGLIKNLFKDVLDKDIQTPFLKIPYSEAIDRYGLDKPDLRF-GLELK 314

Query: 184 TTLDNPDQPDRHLLYLQAQQAGI 206
              D        +     ++ GI
Sbjct: 315 DVSDIVKTSGFKVFSTVVEKGGI 337



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 71/204 (34%), Gaps = 14/204 (6%)

Query: 150 KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL---QAQQAGI 206
           K   +Q+     F+E E   +AE         +    D P   +  L +L    AQ+  +
Sbjct: 375 KEDGWQSPIAKFFTENEKQALAERIGIETGDLIFFVADQPKITNDALGHLRNHIAQKLNL 434

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
              +   +  +    +IE  E              P  E             ++ ++L  
Sbjct: 435 IDDNVFNFLWVTQFPMIEYDETEKRYQAMHHPFTSPLEEDFELLKETPLAVRSRAYDLVL 494

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQSSGI 322
              E+      +     Q   FE        +       +E F   L+ L +  P   GI
Sbjct: 495 NGSEIGGGSIRIHQKKLQETVFET-------LGMTPESYNEKFGFLLSALDSGAPPHGGI 547

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A GFDRL+M++ G ++I +VI  P
Sbjct: 548 AFGFDRLIMILCGGSSIRDVIAFP 571


>gi|296110400|ref|YP_003620781.1| aspartate--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295831931|gb|ADG39812.1| aspartate--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 591

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 66/188 (35%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ I SS   +   + FI I++  L   +P     ++            
Sbjct: 133 RRPEMQKNLRIRSKIMSSAIHFMDNHDFINIETPILAKSTPEGARDYLVPSRIFPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A A+R+ +     QPEFT ++   +  S ++
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQPEFTQMDVETSFMSADE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +     ++                     S+   +T  E+ AR+   D        + 
Sbjct: 247 IRELVNEWVKAMMHDV--------VDFELDTSKIPTLTWQESMARF-GTDKPDLRIAYEL 297

Query: 192 PDRHLLYL 199
            D   +  
Sbjct: 298 KDLTTIMA 305



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 46/147 (31%), Gaps = 13/147 (8%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR--FTKRFE 263
           +   +   ++ I    L E  E              P  E         DP     + ++
Sbjct: 420 VNSENPWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLDDGEDPHQAHAQSYD 479

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM----PQS 319
           L     EL +    +     Q    +           E       FL  L  M    P  
Sbjct: 480 LVLNGYELGSGSIRIHRMDIQEKMLKAL-----GFTPEAAHEAFGFL--LEGMNYGFPPM 532

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            GIA+G DRL ML+ G  NI EVI  P
Sbjct: 533 GGIALGLDRLAMLLAGQENIREVIAFP 559


>gi|160900885|ref|YP_001566467.1| aspartyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|238687172|sp|A9BP37|SYD_DELAS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|160366469|gb|ABX38082.1| aspartyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 600

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 66/193 (34%), Gaps = 12/193 (6%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKP 75
           R   L  R  IQ  +R +  +  FI+I++  L + +P     ++            + + 
Sbjct: 139 RNMMLRYRTAIQ--VRNFLDKEGFIDIETPMLGKSTPEGARDYLVPSRVHDGEFFALPQ- 195

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
                SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    E++   
Sbjct: 196 -----SPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLDEEEIRAI 250

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
              +I    +           +     +   + +  +       ++     +     D  
Sbjct: 251 FQRMITEVFKTQLDVDLGEFPMMTYQDAAFRFGS--DKPDLRVKLEFTELTEIMKDVDFK 308

Query: 196 LLYLQAQQAGIRV 208
           +    A   G RV
Sbjct: 309 VFSTPATTKGGRV 321



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 62/196 (31%), Gaps = 18/196 (9%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDR-HLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
           +     +    +   D    +++     R  + + +  +A     +      +    + E
Sbjct: 385 KRTGAQDGDLIFFGADKEKIVNDSIGALRLKVGHSEFGKANGLFENRWAPLWVVDFPMFE 444

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E N            P        +        K +++     EL      +     Q
Sbjct: 445 HDEENDRWAAVHHPFTSPKDGHEELMVTDPANCLAKAYDMVLNGWELGGGSVRIHRADVQ 504

Query: 285 RHRFE------KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGAN 337
              F+      ++ + K              L  L    P   G+A G DRL+ L+TGA+
Sbjct: 505 SKVFDALKISPEDARAKFG----------YLLDALQYGAPPHGGLAFGLDRLITLMTGAD 554

Query: 338 NINEVIWTPFSQSNQE 353
           +I +VI  P +Q  Q+
Sbjct: 555 SIRDVIAFPKTQRAQD 570


>gi|304383159|ref|ZP_07365633.1| aspartate--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335736|gb|EFM01992.1| aspartate--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 589

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 6/167 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R Y    QFIE+++  L   +P      R F     +    
Sbjct: 132 RRQVVRQNLELRHRMTILVRNYLDAQQFIEVETPILIGSTPEG---ARDFVVPSRMN--Q 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFAHQENV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +     + R   +                          +   R+  
Sbjct: 247 LAMFEGMARHLFKEVRGVDLPDPLPQMTWHEAMRRFGSDKPDLRFGM 293



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 46/154 (29%), Gaps = 9/154 (5%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           L     ++ G+R  +      I    +     E    +            +  L + +P 
Sbjct: 407 LRLEMGERLGLRDKNKFVCLWIVDFPLFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPE 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
             R    ++     IE+      + D   Q   F            E         +   
Sbjct: 467 RVR-ALAYDFVCNGIEVGGGSIRIHDGQLQEQMFRIL-----GFTPERAMAQFGFLINAF 520

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P  +GIA G DR V ++ G ++I + I  P
Sbjct: 521 KYGAPPHAGIAFGLDRFVSIMAGLDSIRDCIAFP 554


>gi|313672834|ref|YP_004050945.1| aspartyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939590|gb|ADR18782.1| aspartyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 596

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 71/209 (33%), Gaps = 21/209 (10%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP L    + R+ +  ++REY     F++I++  L   +P     ++            
Sbjct: 141 RRPNLQKNIILRHNLTRTMREYLYGKGFLDIETPFLTKSTPEGARDYLVPSRVNPGKFYA 200

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F     +R+ +     QPEFT L+   +    + 
Sbjct: 201 LPQ------SPQMFKQLLMISGYDRYFQIVRCFRDEDLRADRQPEFTQLDMEMSFIDRQD 254

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           LM     +     +                      +T AEA  +Y++    T  +   +
Sbjct: 255 LMDLIEGLFVEIFQKVAG---------ITVQRPFPVMTYAEAMEKYSHDAPDTRFELFTK 305

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
               L+     +       +       + 
Sbjct: 306 TINDLVKDCEFKVFTDAIKEGGIVKAINA 334



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     ++ G+   +   ++ +    L+E  +              P  E         
Sbjct: 414 KVRLELGRRLGLIDKNKYNFTWVIDFPLLEWDKEEKRYAAVHHPFTAPVDEDIPLFDTDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                K ++L     E+      +     Q   F      K++   +       F+  L 
Sbjct: 474 LKIRAKAYDLVLNGSEIGGGSIRIHRSDIQEKMFNILGLTKEECDLK----FGFFIEALR 529

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DR+  ++ GA++I +VI  P
Sbjct: 530 YGTPPHGGIAFGVDRIASILAGADSIRDVIAFP 562


>gi|195052814|ref|XP_001993375.1| GH13102 [Drosophila grimshawi]
 gi|193900434|gb|EDV99300.1| GH13102 [Drosophila grimshawi]
          Length = 1125

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 73/196 (37%), Gaps = 19/196 (9%)

Query: 17  RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRK 74
             +  L  R+ +   +REY +    F+E+++ +L + +PG       F        H   
Sbjct: 548 DMQHNLRLRSAVIMRMREYLINYLGFVEVETPTLFRRTPGGAQE---FVVPTRKAGHF-- 602

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
              L  SP+   + L++ G ++ F  A  +R+       QPEFT L+   +  S + +M+
Sbjct: 603 -YSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSRDDIMQ 661

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
                +R           S+        +    IT  EA  +Y   D   T       + 
Sbjct: 662 LIEETLRY----------SWPKHLPKLQTPFRRITYEEAMEKY-GNDKPDTRFGFLLNNV 710

Query: 195 HLLYLQAQQAGIRVAH 210
             +  +++    +  +
Sbjct: 711 SEIIEKSENFKDKYEN 726



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 56/191 (29%), Gaps = 36/191 (18%)

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE----PNLGINCCTILDR 240
             +  ++ D     L     G +V   +    I        +E              +  
Sbjct: 784 ATEIIEKFDLEENDLLFLCIGPKVEARNLLGRIRLDYHEFLVENVKTKKPNDYRFLWVVD 843

Query: 241 YPAPES------------------------ALANIYPADPRFTKRFELYACNIELCNACD 276
           +P  E                            +    +   ++ ++L     E+     
Sbjct: 844 FPLFERNPTTNKLESVHHPFTAPLVEDLDKFATSCDNLETIRSEAYDLVLNGQEVGGGSM 903

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
            + D   Q+   E+ ++         +      LA L    P   GIA+G DRL+ ++  
Sbjct: 904 RIHDRDMQQFILEQVLKI-------PHDHLSHLLAALESGCPPHGGIALGLDRLIAILCR 956

Query: 336 ANNINEVIWTP 346
           A +I +VI  P
Sbjct: 957 ARSIRDVIAFP 967


>gi|195483970|ref|XP_002090507.1| GE12772 [Drosophila yakuba]
 gi|194176608|gb|EDW90219.1| GE12772 [Drosophila yakuba]
          Length = 1141

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 73/201 (36%), Gaps = 20/201 (9%)

Query: 13  DFHY-RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQ 69
           D  +   +  L  R+ +   +REY V    F+E+++ +L + +PG       F       
Sbjct: 587 DLRFNDMQHNLRLRSAVIMKMREYLVNYLGFVEVETPTLFRRTPGGAQE---FVVPTRKA 643

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
            H      L  SP+   + L++ G ++ F  A  +R+       QPEFT L+   +  S 
Sbjct: 644 GHF---YSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQPEFTQLDVELSFTSR 700

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + +M+     +R           S+        +    IT  EA  +Y   D   T    
Sbjct: 701 DDIMQLIEETLRY----------SWPKDFPRLQTPFRRITYEEAMEKY-GNDKPDTRFGF 749

Query: 190 DQPDRHLLYLQAQQAGIRVAH 210
              +   +  ++     +   
Sbjct: 750 LLNNVSEIIEKSDDFKEKYED 770



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 60/210 (28%), Gaps = 38/210 (18%)

Query: 166  EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
                V E   +    D+ T +   D+ D     L     G +V        I        
Sbjct: 811  PTKDVQEKLGKLLGEDVATEI--ADKFDLEENDLLFLGIGPKVETRAMLGRIRLDYHEFL 868

Query: 226  IE----PNLGINCCTILDRYPAPES------------ALANIYPADPRF----------- 258
            +E              +  +P  E                  +  D              
Sbjct: 869  VENDKVKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLDNFATSCENLEII 928

Query: 259  -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             ++ ++L     E+      + D   Q    E+ ++         +      L+ L    
Sbjct: 929  RSQAYDLVLNGQEVGGGSIRIHDRDMQHFILEQILKI-------PHDHLSHLLSALESGC 981

Query: 317  PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   GIA+G DRL+ ++  A +I +VI  P
Sbjct: 982  PPHGGIALGLDRLIAILCRARSIRDVIAFP 1011


>gi|153004196|ref|YP_001378521.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152027769|gb|ABS25537.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 616

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 54/161 (33%), Gaps = 13/161 (8%)

Query: 200 QAQQAGIRVAHD----DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            A++ G+   +       +  + +  L E  E +            P             
Sbjct: 435 LAKRMGLIPEYGSGGQWRFLWVVNPPLFEFDEESGQWAAAHHAFTRPHDTDVQYLETDPG 494

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACL 313
                R++L     E+      L DP  Q   F      K       E        L  L
Sbjct: 495 KVNCYRYDLVLNGFEIGGGSIRLHDPAVQARVF------KAMGISDEEAKNKFGFLLEAL 548

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   GIA+G DRLVML+TGA ++ +V+  P +Q   +
Sbjct: 549 KMGAPPHGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTD 589



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 61/188 (32%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
                +  L+ R  +    R YF +  F+E+++  +   +PG   +   F     +    
Sbjct: 152 RRAPLQKTLMTRARVNHLTRNYFTDLAFLELETPFMVKYTPGGARN---FLVPSRLN--- 205

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   +  + AG ++ F     +R+ +     QPEFT ++   +      
Sbjct: 206 PGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQPEFTQIDVEMSFVEQND 265

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +                      +   E+ A+Y N       D P  
Sbjct: 266 VFDVIEGLVVRLWKEVLGVELP---------RPFPRMPFDESMAKYGNDKPDLRFDMPHV 316

Query: 192 PDRHLLYL 199
               L+  
Sbjct: 317 VLTELVRQ 324


>gi|227529154|ref|ZP_03959203.1| aspartate--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
 gi|227350998|gb|EEJ41289.1| aspartate--tRNA ligase [Lactobacillus vaginalis ATCC 49540]
          Length = 595

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 74/217 (34%), Gaps = 8/217 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L+ R+ + S +  Y+    F+++++  L   +P     +I            
Sbjct: 134 RRPEMMKNLMLRSKVTSVVHHYYDNEGFMDVETPDLTRSTPEGARDYIVPSRVYPGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+AAG +K +  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 194 LPQ------SPQLFKQLLMAAGVDKYYQIARCFRDEDLRGDRQPEFTQIDTEMSFATPED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I+   +                    +     +   R+  +    +    D 
Sbjct: 248 IQTVTEGLIKKVMKEVLGVDVKTPFPRMEWQESMDKYGSDKPDTRFGMLIHDLSSIVKDS 307

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             +      A+   +R       +D +SR  I K E 
Sbjct: 308 SFKVFSGTVAKGNFVRAICVPGGADKYSRKDISKKEE 344



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 53/154 (34%), Gaps = 7/154 (4%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    +++  +   +   +  + +  + E  E                 E         D
Sbjct: 408 LRREISKEQDMIAPNQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLENGED 467

Query: 256 PR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           P     + +++     E+      + DP  Q    +     K++   E        L  L
Sbjct: 468 PHKAHAQSYDIILNGQEIGGGSIRIHDPKVQEKVLKALGYTKERA--EARF--GFLLKAL 523

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           T  MP   G+A G DR VML+  A+NI +VI  P
Sbjct: 524 TLGMPPEGGLAFGLDRWVMLLAQADNIRDVIPFP 557


>gi|260061048|ref|YP_003194128.1| aspartyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88785180|gb|EAR16349.1| aspartyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 583

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 79/235 (33%), Gaps = 30/235 (12%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R+Y  +  FIE+++  L   +P      R F     +    
Sbjct: 133 RRNPVKNKLMFRHTVTMEVRKYLSDQGFIEVETPYLIKSTPEG---ARDFVVPSRMNAG- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E 
Sbjct: 189 --EFYALPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLG 183
           +++    + R   +  N               E   +T  EA  RY          ++ G
Sbjct: 247 ILRAFEGLTRHLLKAVNG----------VDTGEFPRMTYDEAIRRYGSDKPDIRFGMEFG 296

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLGINCCTI 237
              +     D ++        GI V             ++     P +G      
Sbjct: 297 ELNEVARHRDFNVFNQAELVVGIAVPGAASYTRKEIDALVDWVKRPQVGAKGMVY 351



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 47/156 (30%), Gaps = 13/156 (8%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A + G+R   +     +    L+E  E +   +        P P           
Sbjct: 405 LRMELAGRLGLRNPKEFAPLWVTDFPLLEFDEESGRYHAMHHPFTAPKPGQLELLDSDPG 464

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLA 311
                 ++L     E+      + D   Q   F      E + + +            + 
Sbjct: 465 AVRANAYDLVLNGNEIGGGSIRIHDKKTQAVMFRHLGFTEAEARAQFG--------FLMD 516

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 P   GIA G DRLV ++ G  +I + I  P
Sbjct: 517 AFQYGAPPHGGIAFGLDRLVAILGGQESIRDYIAFP 552


>gi|148284104|ref|YP_001248194.1| aspartyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|166225370|sp|A5CC91|SYD_ORITB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146739543|emb|CAM79272.1| aspartyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 597

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 17/173 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    ++ R+ +   LR   + N FIE  +  L   SP      R F     +    
Sbjct: 135 RGARLHQNIVLRSKVIQELRNQMLSNGFIEFQTPILTASSPEG---ARDFLVPSRLH--- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ +G +K F  A  +R+ +      P EF  L+   A  +  
Sbjct: 189 PGKFYALPQAPQQFKQLIMMSGFDKYFQIAPCFRDEDARADRSPGEFYQLDIEMAFVT-- 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
                    +    E      F   +           IT  E+  RY +    
Sbjct: 247 ------QEDVFGLVEPVLYNTFKKFSNYSITNIPFPRITYDESMLRYGSDKPD 293



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 11/99 (11%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-T 314
             ++++    +EL +       P      F      K         +D+ F   +     
Sbjct: 478 AFQYDIVCNGVELSSGAIRNHKPDLMYKAFAIVGYSKD-------EVDKQFGAMIRAFCY 530

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   GIA G DR++ML+T + NI EVI  P +Q  ++
Sbjct: 531 GAPPHGGIAPGIDRILMLLTNSVNIREVIAFPMNQQAED 569


>gi|313884180|ref|ZP_07817946.1| aspartate--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620627|gb|EFR32050.1| aspartate--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 593

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 65/203 (32%), Gaps = 26/203 (12%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
           + +   + R            L  R+ +  ++R Y     FI++++  L   +P      
Sbjct: 122 DEEVRLKYRYLDLRRPNMVKNLKLRHQVTKTIRHYLDNKDFIDVETPYLTRSTPEG---A 178

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F               L  SP+   + L+ +G ++ +     +R+ +     QPEFT 
Sbjct: 179 RDFLVPTR--REPNSFYALPQSPQIYKQLLMGSGIDRYYQIVRCFRDEDLRGDRQPEFTQ 236

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           ++   +  +  ++ +   N+++   +                      +T  EA   Y  
Sbjct: 237 VDLETSFMTQAEIQEIVENMLKDVVKETRGLEIK---------EAFPVMTYDEAMNSY-G 286

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQ 202
            D      +    D       A 
Sbjct: 287 SDKPDIRFDMTLKDLSDFAATAD 309



 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 42/148 (28%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A + G+    +  +  +    L+E                 P            +    
Sbjct: 415 LAAKHGLYDEAELAFLWVVDWPLLEFDPEAGRYVAMHHPFTSPQNSDIAELKAHPEKALA 474

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++     E+      +     Q   FE           E        L       P 
Sbjct: 475 NAYDIVLNGYEIGGGSIRIHTREMQDQMFE----LLGFTPEEAENQFGFLLHAFDYGFPP 530

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             G+A+G DRLVM++    NI +VI  P
Sbjct: 531 HGGLAIGLDRLVMILAQEKNIRQVIAFP 558


>gi|256752944|ref|ZP_05493773.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748177|gb|EEU61252.1| aspartyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 448

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 69/188 (36%), Gaps = 18/188 (9%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           L+ R  I   +R++  +N FIEI++  L   +P     ++            + +     
Sbjct: 5   LMTRFKITKVVRDFLNKNGFIEIETPLLIKSTPEGARDYLVPSRIYPGKFYALPQ----- 59

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+ +G +K +  A   R+ +     QPEFT ++   +    E ++K    +
Sbjct: 60  -SPQIFKQLLMISGFDKYYQIAKCLRDEDLRADRQPEFTQIDIEMSFVEVEDVLKINEKM 118

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I    +              +     + ++  E+  R+   D        +  D   +  
Sbjct: 119 IAEIFKETLG---------IDVPIPFKRLSYQESMERF-GTDKPDLRFGMELKDLSDIVA 168

Query: 200 QAQQAGIR 207
           Q++    +
Sbjct: 169 QSEFNVFK 176



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL     ++  +   +   +  I    L+E  E              P  E         
Sbjct: 270 HLRLELGKRFNLIDENKYEFVWIVDFPLLEYDEGEKRYVAKHHPFTAPKDEDIELLEKEP 329

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                K +++     E+      + D   Q+  F      E++  E+     E +     
Sbjct: 330 LKVRAKAYDIVLNGTEIGGGSIRIHDTELQKRMFKVLGFSEEKAWERFGFLMEAFK---- 385

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                   P   GIA G DRL M++TG++ I +VI  P +Q+
Sbjct: 386 -----YGAPPHGGIAYGLDRLAMIITGSDTIRDVIAFPKTQN 422


>gi|157151663|ref|YP_001451308.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076457|gb|ABV11140.1| aspartyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 584

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 45/150 (30%), Gaps = 9/150 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +       +  +    + E  E              P  E+A            
Sbjct: 407 IAKELDLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQAETAHELEGDLAKVRA 466

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLACL-TEM 316
             +++     EL      +     Q   F      K   +   E        L  +    
Sbjct: 467 IAYDIVLNGYELGGGSLRINQKELQERMF------KALGFSAEEANDQFGFLLEAMDYGF 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A+G DR VML+ G  NI EVI  P
Sbjct: 521 PPHGGLAIGLDRFVMLLAGEENIREVIAFP 550



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            L  R  +  S+R Y  E +FI++++  L   +P     ++ 
Sbjct: 122 DTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+ + + L+ AG ++ +     +R+ +     QPEFT +
Sbjct: 182 PSRVNKGHFYALPQ------SPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQV 235

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  S +++      +I    +       +                  +   R+  +
Sbjct: 236 DLETSFLSEQEIQDITEGLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDML 295

Query: 181 --DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
             DL   +   D           +   ++ A D+       ++  
Sbjct: 296 LQDLTEVVKGVDFKVFSEAPAV-KAIVVKGAADNYSRKDIDKMTE 339


>gi|42520288|ref|NP_966203.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|59798566|sp|Q73HX6|SYD_WOLPM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|42410026|gb|AAS14137.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 600

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 63/173 (36%), Gaps = 18/173 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + R  ++ R+ I + LR+  +E  F+EI +  L   SP     ++            
Sbjct: 146 RREKVRNNIILRSQIIAELRKLMIERGFLEIQTPILTASSPEGARDYLVPSRLNPGKFYA 205

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  + E
Sbjct: 206 LPQ------APQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMSFVTQE 259

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            + +   + +       ++K                 IT  EA  +Y +    
Sbjct: 260 DIFQIIESTLYRVFAKFSRKSVDKD---------FPRITYKEAMLKYGSDKPD 303



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 56/201 (27%), Gaps = 18/201 (8%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
           +              NI+ G ++      +     +  +   +  +      D   R   
Sbjct: 384 KFLDENRLNHIREATNIEPGDSVFFASDKENEAANIAGKVRTLLGSELSLIDDNIFRFCW 443

Query: 224 EKIEPNLGINCCTILDRY---PAPESALANIYPADPR----FTKRFELYACNIELCNACD 276
               P    +  +    +   P            D         +++L    IEL +   
Sbjct: 444 IIDFPYFVYDDKSKKIDFFHNPFSMPHGGLKDLEDKNPLDILAYQYDLVCNGIELSSGAI 503

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVML 332
                      F                +D  F   +      +P   GIA G DR+VML
Sbjct: 504 RNNKLDIMYKAF-------AIAGYSRGEVDTRFGALVRAFRFGVPPHGGIAPGVDRIVML 556

Query: 333 VTGANNINEVIWTPFSQSNQE 353
           +    NI EVI  P +Q  ++
Sbjct: 557 LADEPNIREVICFPMNQQGED 577


>gi|195115020|ref|XP_002002065.1| GI14195 [Drosophila mojavensis]
 gi|193912640|gb|EDW11507.1| GI14195 [Drosophila mojavensis]
          Length = 1190

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 70/196 (35%), Gaps = 19/196 (9%)

Query: 13  DFHY-RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQ 69
           D  +   +  L  R+ +   +REY +    F+E+++ +L + +PG       F       
Sbjct: 606 DLRFNDMQHNLRLRSAVIMRMREYLINYLGFVEVETPTLFRRTPGGAQE---FVVPTRKA 662

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
            H      L  SP+   + L++ G ++ F  A  +R+       QPEFT L+   +  S 
Sbjct: 663 GHF---YSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSR 719

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + +M+     +R           S+        +    IT  EA  +Y      T     
Sbjct: 720 DDIMQLIEETLRY----------SWPKHLPKLQTPFRRITYEEALEKYGTDKPDTRFCFL 769

Query: 190 DQPDRHLLYLQAQQAG 205
                 ++       G
Sbjct: 770 LNNVSDIIEKSENFKG 785



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 8/90 (8%)

Query: 258  FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             ++ ++L     E+      + D   Q+  F  E   K    +  +      L+ L    
Sbjct: 948  RSEAYDLVLNGQEVGGGSMRIHDRDMQQ--FILEQVLKIPHDHLAH-----LLSALESGC 1000

Query: 317  PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   GIA+G DRL+ ++  A +I +VI  P
Sbjct: 1001 PPHGGIALGLDRLIAILCRARSIRDVIAFP 1030


>gi|83720369|ref|YP_441117.1| aspartyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167579867|ref|ZP_02372741.1| aspartyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
 gi|167617942|ref|ZP_02386573.1| aspartyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257140221|ref|ZP_05588483.1| aspartyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|97196581|sp|Q2T132|SYD_BURTA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83654194|gb|ABC38257.1| aspartyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 600

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 43/145 (29%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  +              P  E              K +
Sbjct: 424 KANGLVESGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGPEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFP 564



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 70/184 (38%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +     ++IR   +           ++    ++   +  +EA AR+ +   DL   L+  
Sbjct: 247 IRDLFEDMIRHIFKTT---------IDVELDAKFPVMPYSEAMARFGSDKPDLRVKLEFT 297

Query: 190 DQPD 193
           +  D
Sbjct: 298 ELTD 301


>gi|331703342|ref|YP_004400029.1| aspartyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328801897|emb|CBW54050.1| Aspartyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 574

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 56/135 (41%), Gaps = 6/135 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R  I   +R +  ++ F+E+++      +P      R F     +    
Sbjct: 128 RRQVMQNNLIIRAKINHIIRNFLTDSNFLEVETPYFAKSTPEG---ARDFLVPSRLNK-- 182

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ +G ++ +     +R+ +     QPEFT L+   +  + E +
Sbjct: 183 NKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQPEFTQLDLEMSFATSEDV 242

Query: 133 MKDCMNIIRCAAEVA 147
           M+   ++I+   +  
Sbjct: 243 MQISESLIKKILKEV 257



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 54/183 (29%), Gaps = 11/183 (6%)

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I   +   +   I          Q    +    A+   +    D     +    L E  E
Sbjct: 369 IKEFDIKNKATIILNIGKYAEISQLMGAIRISLAKMFNLETKDDFKLLWVVDFPLFEFSE 428

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                         P  E                ++L     E+      + +P  Q+  
Sbjct: 429 KENRYVAAHHPFTSPKEECLTDFDTNKKDALACAYDLVMNGFEIGGGSQRITNPEIQQRM 488

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL----TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           F         +      ++ +F   +       P  +GIA G DR+ M++T +N+I +VI
Sbjct: 489 F-------DAVELTAQQVETNFGWFMNAYKYGAPYHAGIAWGLDRISMILTDSNSIRDVI 541

Query: 344 WTP 346
             P
Sbjct: 542 AFP 544


>gi|240173264|ref|ZP_04751922.1| aspartyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 591

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 71/212 (33%), Gaps = 32/212 (15%)

Query: 3   QIP---SQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P    +P    +   + R            +  R+ + ++ R+    + F+EI++ ++
Sbjct: 106 PLPFQLDEPAG-EELRLKYRYLDLRRDGPASAIRLRSKVNAAARDVLARHDFVEIETPTI 164

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              +P      R F     +        Y L  SP+   + L+ AG E+ +  A  +R+ 
Sbjct: 165 TRSTPEG---ARDFLVPARLH---PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDE 218

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT L+   +    E ++     I+    E+                +    
Sbjct: 219 DFRADRQPEFTQLDMELSFVDAEDIIAISEEILTALWELIG----------YRISTPIPR 268

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I+ A+A  R+ +                    
Sbjct: 269 ISYADAMRRFGSDKPDMRFGVELVECTEFFKD 300



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 17/114 (14%)

Query: 241 YPAPESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRF------EKEM 292
           + AP+    +   +DP       +++     E+      +     Q   F      + E 
Sbjct: 451 FTAPKPEFEDRIDSDPGSVLADAYDIVCNGHEIGGGSVRIHRRDVQERVFAVMGLDKAEA 510

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +EK     E +             P   GIA G+DR+  L+ GA++I EVI  P
Sbjct: 511 EEKFGFLLEAFMF---------GAPPHGGIAFGWDRITALLAGADSIREVIAFP 555


>gi|300727957|ref|ZP_07061335.1| aspartate--tRNA ligase [Prevotella bryantii B14]
 gi|299774799|gb|EFI71413.1| aspartate--tRNA ligase [Prevotella bryantii B14]
          Length = 586

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R +    QF+EI++  L   +P      R F     +    
Sbjct: 132 RRNAVRKNLELRHRMTILIRNFLDSKQFMEIETPVLIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVAGIDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    ++ R   +                      +T  EA  +Y +             
Sbjct: 247 INLFEDMARHLFKEIRGVDIPKMQQ----------MTWQEAMKKYGSDKPDLRFGMEFVE 296

Query: 193 DRHLLYL 199
              +L L
Sbjct: 297 LMDVLKL 303



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 8/128 (6%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           +     E    +            +  L + +P   R  K ++     IE+      + D
Sbjct: 431 LFEWSDEEQRLMATHHPFTMPNPDDIPLLDEHPEQVR-AKAYDFVCNGIEVGGGSLRIHD 489

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
              Q   FE           E       FL        P  +G+A G DR V ++ G ++
Sbjct: 490 TKLQEKMFEVL-----GFTPERAEAQFGFLMNAFKYGAPPHAGLAFGLDRFVSILAGLDS 544

Query: 339 INEVIWTP 346
           I + I  P
Sbjct: 545 IRDCIAFP 552


>gi|54020359|ref|YP_115651.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987532|gb|AAV27733.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 569

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 66/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L  R  I   +R +  +N FIEI++  L   +P      R+F      +   
Sbjct: 125 RRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEG---ARSFLVPTRQKGKF 181

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +  EK F FA  +R+ +     Q EF  L+      ++E++
Sbjct: 182 ---FALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDRQFEFLQLDLEFGFATFEKI 238

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            ++   +IR            +  +  N   +   +T  EA   Y   D           
Sbjct: 239 SEEIEALIRDL----------WTKIFPNLAIDFPKLTYFEAIKNY-GTDKPDLRFETKLF 287

Query: 193 DRHLLYLQ 200
           D   L   
Sbjct: 288 DLDFLNNI 295



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 12/157 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L  L A++  +       ++ I +  L E    N   +                +  P 
Sbjct: 390 ALRNLVAKKYKLINGDQFKFAWIINWPLFELDINNKLTSAHHPFTAPTLESQQFLHKNPL 449

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                + ++L     EL +    + +   Q+  F         +  +   I   F   L 
Sbjct: 450 KV-QAQAYDLVLNGFELGSGSIRIHNVELQKQVFTI-------LGLDQDQIHTQFGALLR 501

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                +P   G A G DRL+M++   N+I +VI  P 
Sbjct: 502 AFNYGVPPHGGFAFGLDRLIMILRKTNSIRDVIAFPV 538


>gi|254796834|ref|YP_003081671.1| aspartyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590060|gb|ACT69422.1| aspartyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 598

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 66/205 (32%), Gaps = 29/205 (14%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
           Q+ S+  +  +   R R            ++ R+ I S +R++     F E  +  L  +
Sbjct: 125 QVDSEFPYPEETRLRYRYLDLRRDKLKKNIILRSKIISEIRKFMEGEGFTEFQTPILTAT 184

Query: 53  -PGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
            P     +I            + +      +P+   + L+ AG ++ F  A  +R+ +  
Sbjct: 185 SPEGARDYIVPSRIHKGKFYALPQ------APQQFKQLLMVAGFDRYFQIAPCFRDEDSR 238

Query: 111 CLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
               P EF  L+   +    E++ +    ++              +  N       E I 
Sbjct: 239 ADRSPGEFYQLDVEMSFVGQEEVFELMERLL---------THIFSKYSNRKVSGSFERIP 289

Query: 170 VAEAFARYANIDLGTTLDNPDQPDR 194
             E+   Y   D     +     D 
Sbjct: 290 YEESMLLY-GTDKPDLRNPIKIADF 313



 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 71/240 (29%), Gaps = 10/240 (4%)

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
              P        R                R  A +               F   E I+  
Sbjct: 336 RGIPAPNCGNKPRKFFDEMIKYATTELCARGLAYLCFDSGIPKGP--IAKFLSFEQISEI 393

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV----AHDDTWSDIFSRILIEKIE 227
              A  +  D      + +Q    +     ++ G+ +      +  +  I      E  E
Sbjct: 394 AKKACLSKDDAIFFSCDAEQAATKIAGAVRKRLGLELSLIDNTEYKFCWIVDFPYFELDE 453

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               ++        P       N  P     ++++++    +EL +       P      
Sbjct: 454 TTGKLDFSHNPFSMPKGGLEALNGDPLKV-VSQQYDIVCNGVELSSGAVRNHKPEIMYRA 512

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           F+    +K+ +      + E F      +P  +GIA G DR+VML+    NI EVI  P 
Sbjct: 513 FDMLGLDKEYVNRVFGALIESF---QYGVPPHAGIAPGIDRMVMLIAEEENIREVIAFPM 569


>gi|209695353|ref|YP_002263282.1| aspartyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|238064703|sp|B6EGJ1|SYD_ALISL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|208009305|emb|CAQ79571.1| aspartyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 591

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 47/144 (32%), Gaps = 6/144 (4%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +     W+ ++        E   G ++        P   +A           +  ++
Sbjct: 416 DLELTDKKAWAPLWVIDFPMFEEDGEGNLHAMHHPFTSPLGMTAEELKVNPAAANSDAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
           +     E+      + +   Q   F     E K    E        L  L    P  +G+
Sbjct: 476 MVINGYEVGGGSVRIHNAEMQTAVFGILGIEAK----EQQEKFGFLLEALKYGTPPHAGL 531

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DRL ML+ G  NI +VI  P
Sbjct: 532 AFGLDRLAMLLCGTENIRDVIAFP 555



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  EN F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  S  Q
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFLSSNQ 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +                      +  +EA  R+   D     +  + 
Sbjct: 244 VRDITERLVHDMWKELLDVELGQ----------FPIMKFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDIADLLKDVEFQVFAGPANDEKGRV 318


>gi|262196372|ref|YP_003267581.1| aspartyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262079719|gb|ACY15688.1| aspartyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 618

 Score = 96.6 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 52/155 (33%), Gaps = 9/155 (5%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            + G+    +  +  +    L E+ E    +         P PE         +    + 
Sbjct: 421 DKLGMIREGEWRFMWLTDPPLFEQPEDGGALVSSHHPFTSPRPEDEEHLESAPERVLARA 480

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACL-TEMPQ 318
           ++L    +E+      +     Q   F      K       E        L       P 
Sbjct: 481 YDLVLNGVEVGGGSIRIHRSDLQARIF------KALGISDEEAQEKFGFLLEAFKYGPPP 534

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             GIA+G DRL ML+TGA ++ +V+  P +Q   +
Sbjct: 535 HGGIALGLDRLSMLLTGAESLRDVLAFPKTQKGSD 569



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 65/187 (34%), Gaps = 20/187 (10%)

Query: 18  RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
           RRP L +    R     S+R Y   N F +I++  L   +PG   +   F     +Q   
Sbjct: 140 RRPVLQRNLQMRAQAVHSMRTYLAANGFSDIETPFLVKYTPGGARN---FVVPSRLQ--A 194

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +    + L
Sbjct: 195 GSFYALAESPQIYKQLLMVAGFERYYQVVRCFRDEDLRLDRQPEFTQIDIELSFIDEKGL 254

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +I    +                 +    ++  EA  +Y  +D      + +  
Sbjct: 255 QTIIEGMIAKLWQDVLGVELQ---------TPFLRMSWDEAMRKY-GVDKPDLRLDLELC 304

Query: 193 DRHLLYL 199
           +      
Sbjct: 305 EITEACA 311


>gi|254181771|ref|ZP_04888368.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184212309|gb|EDU09352.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 600

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 43/145 (29%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  +              P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGPEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFP 564



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +                          +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHIFKTTIGVELDATFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSAPANTKDGRVA 323


>gi|42560880|ref|NP_975331.1| aspartyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|62287569|sp|Q6MTR3|SYD_MYCMS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|42492377|emb|CAE76973.1| aspartate-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320537|gb|ADK69180.1| aspartate--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 574

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 56/135 (41%), Gaps = 6/135 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R  I   +R +  ++ F+E+++      +P      R F     +    
Sbjct: 128 RRPVMQNNLIIRAKINHIIRNFLTDSNFLEVETPYFAKSTPEG---ARDFLVPSRLNK-- 182

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ +G ++ +     +R+ +     QPEFT L+   +  + E +
Sbjct: 183 NKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQPEFTQLDLEMSFATSEDV 242

Query: 133 MKDCMNIIRCAAEVA 147
           M+   ++I+   +  
Sbjct: 243 MQISESLIKKILKEV 257



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 57/183 (31%), Gaps = 11/183 (6%)

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I   +   +   +      +   Q    +    A+   +    D     +    L E  E
Sbjct: 369 IKEFDIKNKATIVLNIGKYEQISQLMGAIRISLAKMFNLETKDDFKLLWVVDFPLFEFSE 428

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                         P  E             T  ++L     E+      + +P  Q+  
Sbjct: 429 QENRYVAAHHPFTSPKEECLTDFDTNKKDALTCAYDLVMNGFEIGGGSQRITNPEIQQRM 488

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL----TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           F         +   T  ++ +F   +       P  +GIA G DR+ M+VT +N+I +VI
Sbjct: 489 F-------DAVELTTQQVETNFGWFMNAYKYGAPYHAGIAWGLDRISMIVTDSNSIRDVI 541

Query: 344 WTP 346
             P
Sbjct: 542 AFP 544


>gi|312891263|ref|ZP_07750782.1| aspartyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311296223|gb|EFQ73373.1| aspartyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 581

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 75/231 (32%), Gaps = 14/231 (6%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  ++ R+ +   +R+Y     FIE+++  L   +P      R F     +   
Sbjct: 131 LRRAPIRNNMILRHKMAQEVRKYLDGMNFIEVETPVLIKSTPEG---ARDFVVPSRMNAG 187

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +  + E
Sbjct: 188 ---EFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFITQE 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     + R   +    K     +     +++   +  ++       +      D   
Sbjct: 245 DILNTFEGLARTLFKNV--KGIDLIDFPRMQYADAMRLYGSDKPDVRFGMQFVELNDIVK 302

Query: 191 QPDRHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
                +        GI      D        +      P +G      L  
Sbjct: 303 GKGFGVFDNAGLVVGINAKGAADYTRKQLDELTEWLKRPQIGATGLIYLRH 353



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R  +      +    L+E  E     +        P PE         
Sbjct: 403 ELRLEMGTRLGLRDKNTFAPLWVLDFPLLEWDEETSRYHAMHHPFTSPKPEDIALLETDP 462

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
                  +++    IE+      + D   Q   F      K   +   E        +  
Sbjct: 463 GAVRANAYDMVINGIEVGGGSIRIHDRELQALMF------KHLGFSPEEAQKQFGFLMDA 516

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P   GIA GFDRL  +  G ++I +VI  P
Sbjct: 517 FEFGAPPHGGIAFGFDRLCSIFAGLDSIRDVIAFP 551


>gi|198274757|ref|ZP_03207289.1| hypothetical protein BACPLE_00916 [Bacteroides plebeius DSM 17135]
 gi|198272204|gb|EDY96473.1| hypothetical protein BACPLE_00916 [Bacteroides plebeius DSM 17135]
          Length = 587

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 58/171 (33%), Gaps = 16/171 (9%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RR   R  L  R+ +   +R Y     F+E+++  L          R F     +    
Sbjct: 131 LRRTAVRKNLELRHRMTMEVRRYLDSKGFLEVETPML--IGSTPEGARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +     + +   +       +              +  A+A   Y +    
Sbjct: 247 INTFEGMAKHLFKELRGVELT---------EPFLRMPWADAMKYYGSDKPD 288



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGNQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    +E+      + D   Q   FE           E         +   
Sbjct: 465 AAVRADAYDMVINGVEVGGGSIRIHDSALQAKMFEIL-----GFTPEKAQEQFGFLMNAF 519

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KFGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|189184699|ref|YP_001938484.1| aspartyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|238692025|sp|B3CV53|SYD_ORITI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189181470|dbj|BAG41250.1| asparaginyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 597

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 55/168 (32%), Gaps = 17/168 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    ++ R+ +   LR   + N FIE  +  L   SP      R F     +    
Sbjct: 135 RGARLHQNIVLRSKVIQELRNQMLSNGFIEFQTPILTASSPEG---ARDFLVPSRLH--- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ +G +K F  A  +R+ +      P EF  L+   A  +  
Sbjct: 189 PGKFYALPQAPQQFKQLIMMSGFDKYFQIAPCFRDEDARADRSPGEFYQLDIEMAFVT-- 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
                    +    E      F   +           IT  E+  RY 
Sbjct: 247 ------QEDVFGLVEPVLYNTFKKFSNYSITDIPFPRITYDESMLRYG 288



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 56/180 (31%), Gaps = 18/180 (10%)

Query: 185 TLDNPDQPDRHLLYLQAQ---QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             D  D   +    ++A+   +  I       +  +      +       I         
Sbjct: 397 ICDKEDDATKVAAKIRAKVGEELNIIKTDCYKFCWVIDFPFYQLDSEVNKITFSHNPFSM 456

Query: 242 P----APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
           P       +    +         ++++    +EL +       P      F      K  
Sbjct: 457 PQGGIEAFNKAKTVEDLLSIKAFQYDIVCNGVELSSGAIRNHKPDLMYKAFAIAGYSKD- 515

Query: 298 IYNETYPIDEDF---LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  +D+ F   +       P   GIA G DR++ML+T + NI EVI  P +Q  ++
Sbjct: 516 ------EVDKQFGAMIRAFSYGAPPHGGIAPGIDRILMLLTNSVNIREVIAFPMNQQAED 569


>gi|255009372|ref|ZP_05281498.1| aspartyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313147129|ref|ZP_07809322.1| aspartyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313135896|gb|EFR53256.1| aspartyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 585

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 22/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R Y  +  F+E+++  L   +P      R F     +   
Sbjct: 131 LRRNAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +V           N         +  +EA   Y   D        + 
Sbjct: 246 VIVTFEGMAKHLFKVI---------RNIELTEPFPRMPWSEAMKLY-GSDKPDIRFGMEF 295

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  +
Sbjct: 296 VE---LMDILKGHGFSVFDN 312



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    L E  E    +         P PE         
Sbjct: 405 ELRLEMGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    +E+      + D   Q   FE           E         +   
Sbjct: 465 AAVRANAYDMVINGVEVGGGSIRIHDSQLQNKMFE-----LLGFTPERAQEQFGFLMNAF 519

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KFGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|134279807|ref|ZP_01766519.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134249007|gb|EBA49089.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 600

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 43/145 (29%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  +              P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGPEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFP 564



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +                          +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHTFKTTIGVELDATFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANTKDGRVA 323


>gi|86739405|ref|YP_479805.1| aspartyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86566267|gb|ABD10076.1| aspartyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 620

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 19/188 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
              R +  L  R+ + +++R       F+E+++  L   +P      R F          
Sbjct: 154 RRDRMQRNLRIRSAVLAAMRSALAPLDFVEVETPLLMPSTPEG---AREFIVPSRQ---F 207

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G ++ F FA   R+ +     Q EFT L+   +    + 
Sbjct: 208 PGSFYALPQSPQLFKQLLMVGGTDRYFQFARCLRDEDLRADRQYEFTQLDLEMSFVDQDD 267

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      +  AA                     E ++  EA  R+  +D        + 
Sbjct: 268 VLDVTSAAVLAAARAVTGGPVP----------PIERMSWHEAMNRF-GVDKPDLRFGMEL 316

Query: 192 PDRHLLYL 199
            +   ++ 
Sbjct: 317 VELTAVFA 324



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 27/128 (21%)

Query: 240 RYPAPESALANIYPADPRFTKR---------FELYACNIELCNACDELLDPIEQRHRF-- 288
            +P         +P D    +          ++L     EL +    + +   Q+  F  
Sbjct: 464 HHP-----FTRPHPDDVDKLETDPLAVRSRAYDLVLNGWELGSGSIRIHESGLQQRIFGI 518

Query: 289 --EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 + K +           FL       P   G A+G DRLV ++ G  NI EVI  
Sbjct: 519 LGISPAEAKARFG--------FFLTPFGYGAPPHGGFAVGIDRLVAILAGEENIREVIAF 570

Query: 346 PFSQSNQE 353
           P +QS  +
Sbjct: 571 PKTQSGLD 578


>gi|53718287|ref|YP_107273.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76811224|ref|YP_332265.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|62287537|sp|Q62MP0|SYD_BURMA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62287539|sp|Q63X93|SYD_BURPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196569|sp|Q3JVY8|SYD_BURP1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52208701|emb|CAH34637.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|76580677|gb|ABA50152.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
          Length = 598

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 43/145 (29%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  +              P  E              K +
Sbjct: 422 KANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 481

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 482 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGPEEAQAKFGFLLDALQYGAPPHGG 537

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 538 IAFGLDRIVTMMAGADSIRDVIAFP 562



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 131 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 186 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +                          +   R   ++     D    
Sbjct: 245 IRDLFEDMIRHIFKTTIGVELDATFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 303

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 304 VDFKVFSTPANTKDGRVA 321


>gi|325297825|ref|YP_004257742.1| aspartyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324317378|gb|ADY35269.1| aspartyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 585

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 66/199 (33%), Gaps = 20/199 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RR   R  L  R+ +   +R Y     F+E+++  L          R F     +    
Sbjct: 131 LRRTAVRKNLELRHRMTMEVRRYLDSKGFLEVETPML--IGSTPEGARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++    + +   +                    + +  A+A  +Y   D           
Sbjct: 247 IQMFEGMAKHLFKELRGVEL---------AGPFQRMPWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDILKGYGFSVFDN 312



 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 42/154 (27%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R         +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGNQLGLRDKDKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    +E+      + D   Q   FE           E         +   
Sbjct: 465 ASVRADAYDMVVNGVEVGGGSIRIHDSALQEKMFEIL-----GFTPEKAQEQFGFLMNAF 519

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KFGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|300812627|ref|ZP_07093040.1| aspartate--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496408|gb|EFK31517.1| aspartate--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 614

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 5/152 (3%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++ GI       +  +    L E  E +            P  +          
Sbjct: 411 LRRQTARETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPH 470

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
               + +++     EL      +     Q   F+     K++     Y      +  L  
Sbjct: 471 KAHARSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKER----AYEQFGFLMDALDM 526

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             P  +G+A+G DR  ML+ G +NI +VI  P
Sbjct: 527 GFPPHAGLAIGLDRFAMLLAGKDNIRDVIAFP 558



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 64/189 (33%), Gaps = 18/189 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I ++   Y     FI I++  L + +P     ++            
Sbjct: 136 RRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLVPSRVYPGSFYA 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEFT ++   +    E 
Sbjct: 196 LPQ------SPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQPEFTQIDLETSFMDEEG 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++    +              +       IT  E+  +Y   D   T      
Sbjct: 250 VQEVTEGLLAKVMKDVKG---------IDLQLPLPRITWQESMDKY-GCDKPDTRYEMLI 299

Query: 192 PDRHLLYLQ 200
            D   ++ +
Sbjct: 300 HDLGNVFAK 308


>gi|167901359|ref|ZP_02488564.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 600

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 43/145 (29%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  +              P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGPEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFP 564



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +                          +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHIFKTTIGVELDATFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANTKDGRVA 323


>gi|53724995|ref|YP_102028.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121599730|ref|YP_994048.1| aspartyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124386059|ref|YP_001028288.1| aspartyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126450153|ref|YP_001081932.1| aspartyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126452649|ref|YP_001064973.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167001912|ref|ZP_02267702.1| aspartate--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167718148|ref|ZP_02401384.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167737177|ref|ZP_02409951.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167814310|ref|ZP_02445990.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167822786|ref|ZP_02454257.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167844361|ref|ZP_02469869.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167892873|ref|ZP_02480275.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167909589|ref|ZP_02496680.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167917603|ref|ZP_02504694.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|226196745|ref|ZP_03792325.1| aspartate--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237810878|ref|YP_002895329.1| aspartate--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238561941|ref|ZP_00441255.2| aspartate--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242314366|ref|ZP_04813382.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254177015|ref|ZP_04883672.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254196309|ref|ZP_04902733.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254203714|ref|ZP_04910074.1| aspartyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254208689|ref|ZP_04915037.1| aspartyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254261739|ref|ZP_04952793.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254360255|ref|ZP_04976525.1| aspartyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|166225326|sp|A3MNU6|SYD_BURM7 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225327|sp|A2S8L9|SYD_BURM9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225328|sp|A1V745|SYD_BURMS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225329|sp|A3NRK2|SYD_BURP0 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52428418|gb|AAU49011.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121228540|gb|ABM51058.1| aspartyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124294079|gb|ABN03348.1| aspartate--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126226291|gb|ABN89831.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126243023|gb|ABO06116.1| aspartate--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147745226|gb|EDK52306.1| aspartyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147750565|gb|EDK57634.1| aspartyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148029495|gb|EDK87400.1| aspartyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160698056|gb|EDP88026.1| aspartyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169653052|gb|EDS85745.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|225931276|gb|EEH27283.1| aspartate--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237503764|gb|ACQ96082.1| aspartate--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238523664|gb|EEP87101.1| aspartate--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242137605|gb|EES24007.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243062321|gb|EES44507.1| aspartate--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254220428|gb|EET09812.1| aspartate--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 600

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 43/145 (29%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  +              P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGPEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFP 564



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +                          +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHIFKTTIGVELDATFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANTKDGRVA 323


>gi|288802549|ref|ZP_06407988.1| aspartate--tRNA ligase [Prevotella melaninogenica D18]
 gi|302346403|ref|YP_003814701.1| aspartate--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|288335077|gb|EFC73513.1| aspartate--tRNA ligase [Prevotella melaninogenica D18]
 gi|302150945|gb|ADK97206.1| aspartate--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 585

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 69/222 (31%), Gaps = 8/222 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  +  R+ +   +R +    QF+E+++  L   +P      R F     +    
Sbjct: 132 RREAVRKNMELRHRMTILIRNFLDAAQFMEVETPILIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVAGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + R                        +     +   R+    +    D     
Sbjct: 247 INLFEEMARHLFREIRGVELPKLEQMKWH-DAMKRYGSDKPDLRFGMEFVELMDDLKGTG 305

Query: 193 DRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEKIEPNLGIN 233
              +    A   GI V    D      + +      P +G  
Sbjct: 306 SFSVFDEAAYIGGIVVPGCADYSRKQLNELTDFVKRPQVGAQ 347



 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 38/128 (29%), Gaps = 17/128 (13%)

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPR----FTKRFELYACNIELCNACDELLDPIE 283
                    +   +P       +I   D        K ++     IE+      + D   
Sbjct: 434 EWSDEEQRLMATHHPFTMPNPDDIKLLDEHPEQVRAKAYDFVCNGIEVGGGSLRIHDTQL 493

Query: 284 QRHRFEKE----MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           Q   FE         K +            +       P  +G+A G DR V ++ G ++
Sbjct: 494 QEKMFEVLGFTPESAKAQFG--------FLMNAFKYGAPPHAGLAFGLDRFVSIMAGLDS 545

Query: 339 INEVIWTP 346
           I + I  P
Sbjct: 546 IRDCIAFP 553


>gi|144575341|gb|AAZ53617.2| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 567

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 66/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L  R  I   +R +  +N FIEI++  L   +P      R+F      +   
Sbjct: 123 RRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEG---ARSFLVPTRQKGKF 179

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +  EK F FA  +R+ +     Q EF  L+      ++E++
Sbjct: 180 ---FALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDRQFEFLQLDLEFGFATFEKI 236

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            ++   +IR            +  +  N   +   +T  EA   Y   D           
Sbjct: 237 SEEIEALIRDL----------WTKIFPNLAIDFPKLTYFEAIKNY-GTDKPDLRFETKLF 285

Query: 193 DRHLLYLQ 200
           D   L   
Sbjct: 286 DLDFLNDI 293



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 12/157 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L  L A++  +       ++ I +  L E    N   +                +  P 
Sbjct: 388 ALRNLVAKKYKLINEDQFKFTWIINWPLFELDINNKLTSAHHPFTAPTLESQQFLHKNPL 447

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                + ++L     EL +    + +   Q+  F         +  +   I   F   L 
Sbjct: 448 KV-QAQAYDLVLNGFELGSGSIRIHNAELQKQVFTI-------LGLDQDQIHTQFGALLR 499

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                +P   G A G DRL+M++   N+I +VI  P 
Sbjct: 500 AFNYGVPPHGGFAFGLDRLIMILRKTNSIRDVIAFPV 536


>gi|218709098|ref|YP_002416719.1| aspartyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254781762|sp|B7VMI0|SYD_VIBSL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218322117|emb|CAV18230.1| Aspartyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 592

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 19/206 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   +  R    S +R +  EN F++I++  L   +P     ++            
Sbjct: 130 RRPEMSDRIKLRARASSFVRRFLDENLFLDIETPVLTKATPEGARDYLVPSRVHKGSFYA 189

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 190 LPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFLTSQE 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +                      +  +EA  R+   D     +  + 
Sbjct: 244 VRNVTEKLVHDMWKELLDVELGQ----------FPVMPFSEAIRRF-GSDKPDLRNPLEL 292

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D   L    +        +D    +
Sbjct: 293 VDVADLVKDVEFKVFSGPANDEKGRV 318



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 46/144 (31%), Gaps = 6/144 (4%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLG-INCCTILDRYPAPESALANIYPADPRFTKRFE 263
            + +     W+ ++        E   G ++        P   +A           +  ++
Sbjct: 416 DLELTDTSAWAPLWVVDFPMFEEDGEGNLHAMHHPFTSPLGVNAEELKANPAAANSDAYD 475

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGI 322
           +     E+      +     Q   F     E K    E        L  L    P  +G+
Sbjct: 476 MVINGYEVGGGSVRIHSAEMQTAVFGILGIEAK----EQQEKFGFLLEALKYGTPPHAGL 531

Query: 323 AMGFDRLVMLVTGANNINEVIWTP 346
           A G DRL ML+ G  NI +VI  P
Sbjct: 532 AFGLDRLAMLLCGTENIRDVIAFP 555


>gi|149369610|ref|ZP_01889462.1| aspartyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149357037|gb|EDM45592.1| aspartyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 586

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 73/221 (33%), Gaps = 9/221 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+ +  ++R Y     F+++++  L   +P      R F     + +   +   
Sbjct: 138 RENLIFRHKVSMAVRNYLSNEGFVDVETPYLIKSTPEG---ARDFVVPSRMNE--GQFYA 192

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E ++    
Sbjct: 193 LPQSPQTFKQLLMVGGLDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFIEQEDILNMFE 252

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            + R   +  N       +     + +   +   +      ++  G   +     D  + 
Sbjct: 253 GLTRHLLKEING--VEIGDFPRMQYDDAMRLYGNDKPDIRFDMKFGELNEVTQHKDFGVF 310

Query: 198 YLQAQQAGIRVAHD-DTWSDIFSRILIEKIEPNLGINCCTI 237
                  GI V             I+     P +G      
Sbjct: 311 NSAELVVGIAVPGGNKYTRKEIDNIIKWVKRPQVGAMGMIY 351



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 44/157 (28%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A + G+R         +    L+E  E     +        P P          
Sbjct: 404 ALRMHLATELGLRDPKVFAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDSKP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q    +     E + + +            +
Sbjct: 464 GEVKANAYDLVLNGNEIGGGSIRIHDKETQAIMLKHLGFSEEEARAQFG--------FLM 515

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   G+A G DRLV ++ G   I + I  P
Sbjct: 516 DAFEYGAPPHGGLAFGLDRLVSILGGQETIRDFIAFP 552


>gi|254296187|ref|ZP_04963644.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157805741|gb|EDO82911.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 406e]
          Length = 590

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 43/145 (29%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  +              P  E              K +
Sbjct: 414 KANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 473

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 474 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGPEEAQAKFGFLLDALQYGAPPHGG 529

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 530 IAFGLDRIVTMMAGADSIRDVIAFP 554



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 123 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 177

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 178 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 236

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +                          +   R   ++     D    
Sbjct: 237 IRDLFEDMIRHIFKTTIGVELDATFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 295

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 296 VDFKVFSTPANTKDGRVA 313


>gi|219362779|ref|NP_001137009.1| hypothetical protein LOC100217176 [Zea mays]
 gi|194697970|gb|ACF83069.1| unknown [Zea mays]
          Length = 219

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 64/236 (27%), Gaps = 29/236 (12%)

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           M+E   A       M      ++   +   +                E +     +    
Sbjct: 1   MIEPELAFADLNDDMACATAYLQYVVKYILENCK-------------EDMDFFNTWIEKG 47

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGI----RVAHDDTWSDIFSRILIEKIEPNLGINC 234
            ID     D  ++   HL Y  A +  +           W           I        
Sbjct: 48  IIDRLN--DVVEKNFVHLSYTDAVELLLGSKKEFEFPVKWGLDLQSEHERYITEVAFGGR 105

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH-RFEKEMQ 293
             I+  YP    A       D +     +L    +       +  + ++    R +++  
Sbjct: 106 PVIIRDYPKEIKAFYMRENDDGKTVAAMDLLVPRVGELIGGSQREERLDYLEARLDEQNL 165

Query: 294 EKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            K+            +L          +G  +GF+RLV   TG +NI + I  P  
Sbjct: 166 NKESY--------WWYLDLRRYGSVPHAGFGLGFERLVQFATGMDNIRDTIPFPRV 213


>gi|194334276|ref|YP_002016136.1| aspartyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|238693338|sp|B4S8V2|SYD_PROA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|194312094|gb|ACF46489.1| aspartyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 608

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 66/187 (35%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ + S +R Y  ++ F+EI +  L   SP      R F     +    
Sbjct: 146 RREKIHQNIVFRSQLISKVRRYLEDHGFMEIQTPILTASSPEG---ARDFLVPSRLH--P 200

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G  + F  A  +R+ +      P EF  ++   A    + 
Sbjct: 201 GKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQVDMEMAFIEQDD 260

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L +    ++R   E  + K  +              ++  +   R+   D        + 
Sbjct: 261 LFEILEGMLRYLTETMSTKRITQ--------FPFPRLSYRDVMNRF-GSDKPDLRVPLEM 311

Query: 192 PDRHLLY 198
            D   L+
Sbjct: 312 QDVTELF 318



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 13/149 (8%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPADPRFTKRFELYACN 268
            + ++  I    L E  E    I+        P     AL  + P D     ++++    
Sbjct: 435 DELSFCWIVDFPLYEFDEKESRIDFSHNPFSMPQGEMDALDTMNPLDI-LAYQYDIVCNG 493

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAM 324
           IEL +       P      FE     K+        +D+ F   +       P   GIA 
Sbjct: 494 IELSSGAIRNHRPDIMYRAFEIAGYSKE-------EVDKRFGHMIEAFKMGAPPHGGIAP 546

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G DRLVM++   +NI EVI  P +Q  Q+
Sbjct: 547 GLDRLVMILRDEHNIREVIAFPMNQQAQD 575


>gi|189465657|ref|ZP_03014442.1| hypothetical protein BACINT_02017 [Bacteroides intestinalis DSM
           17393]
 gi|189433921|gb|EDV02906.1| hypothetical protein BACINT_02017 [Bacteroides intestinalis DSM
           17393]
          Length = 585

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 6/167 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R Y     FIE+++  L   +P      R F     +    
Sbjct: 132 RRPSVRRNLELRHRMTIEVRRYLDSQGFIEVETPVLVGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQDDI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +     + +   +         Q          +Y    +   R+  
Sbjct: 247 INLFEGMTKYLFKEIRGVELEGQFQRMAWADAMKYYGSDKPDLRFGM 293



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGSQLGLRDKNTFACLWVVDFPMFEWSEQENRLMAMHHPFTHPKDEDIALLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + DP  Q   FE           E       FL    
Sbjct: 465 AAVRADAYDMVINGVEVGGGSIRIHDPKLQAKMFEIL-----GFTPEKAEEQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|126440880|ref|YP_001057727.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|166225330|sp|A3N5V6|SYD_BURP6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|126220373|gb|ABN83879.1| aspartate--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 600

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 43/145 (29%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  +              P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGPEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFP 564



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +                          +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHIFKTTIDVELDATFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANTKDGRVA 323


>gi|330466927|ref|YP_004404670.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328809898|gb|AEB44070.1| aspartyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 606

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 9/160 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP--APESALANIY 252
                 A++AG+       +  +    + E+     G         +P  +P S   + +
Sbjct: 403 AARIEIAKRAGLIDESAWAFCWVVDAPMFERTSDESGAADGWTAVHHPFTSPNSEWVDRF 462

Query: 253 PADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
              P       +++     E+      +     Q+  F+           E        L
Sbjct: 463 EEAPDRALAYAYDIVCNGNEIGGGSIRIHRRDVQQRVFD----LLGITPEEAQDKFGFLL 518

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                  P   GIA G+DR+ ML+ GA++I EVI  P ++
Sbjct: 519 EAFSYGPPPHGGIAFGWDRVCMLLAGADSIREVIAFPKTR 558



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 63/192 (32%), Gaps = 26/192 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   + R            +  R+      R    E  F+EI++ +L   +P      R 
Sbjct: 116 DIRLKYRYLDLRRSGPAKAMRLRSRANQLARTVLHERDFLEIETPTLTRSTPEGA---RD 172

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F   + +Q        L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+
Sbjct: 173 FLVPVRLQ--PGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQPEFTQLD 230

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  + + ++     I+                           IT  +A ARY   D
Sbjct: 231 IEMSFVTEDDVIDLGEAIVSALWSDLAGYEIP---------RPIPRITWHDAMARY-GSD 280

Query: 182 LGTTLDNPDQPD 193
                   +  +
Sbjct: 281 KPDLRYGVELTE 292


>gi|301167876|emb|CBW27461.1| aspartyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 596

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 16/184 (8%)

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
              +         + D    H      ++   +          F  +    +      + 
Sbjct: 386 GEESGNGTWLFCADADHDTTHGCADALRRHLGKKLDIIEDGYKFLWVYDFPLLEWNPDDK 445

Query: 235 CTILDRYPAPESALANIYPA---DPRFTKR--------FELYACNIELCNACDELLDPIE 283
             I   +P     +         DP+ ++         +++     EL      + +   
Sbjct: 446 RYIARHHPFTMINVDQKDTFIAADPKDSESLKDMPAQAYDVVCNGYELGGGSIRIHEQPI 505

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q+  FE           E       F+  L   +P   G+A G DR++ML+   ++I +V
Sbjct: 506 QKKMFEVLG----MGEEEIQSQFGFFVEALKYGVPPHGGLAFGLDRIIMLLAKTDSIRDV 561

Query: 343 IWTP 346
           I  P
Sbjct: 562 IAFP 565



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 55/142 (38%), Gaps = 8/142 (5%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPL 76
           +  L  R+   +++R    E +FIE+++  L + +P     ++            + +  
Sbjct: 145 QDILALRSKATNTVRRILQEQKFIEVETPILYKSTPEGARDYVVPSRVHPGKVYALPQ-- 202

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
               SP+   + L+    +K F     +R+ +     QPEFT ++   +  + E +    
Sbjct: 203 ----SPQTLKQLLMIGSTDKYFQICRCFRDEDLRADRQPEFTQIDMEISFATPEYIKNLV 258

Query: 137 MNIIRCAAEVANQKIFSFQNVN 158
             I+    ++ +       + N
Sbjct: 259 EKILGELFDLEDGFTLPMMSYN 280


>gi|254187701|ref|ZP_04894213.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|157935381|gb|EDO91051.1| aspartyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
          Length = 600

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 43/145 (29%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  +              P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGPEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFP 564



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 64/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   ++                         +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHIFKMTIGVELDATFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANTKDGRVA 323


>gi|217420222|ref|ZP_03451728.1| aspartate--tRNA ligase [Burkholderia pseudomallei 576]
 gi|217397526|gb|EEC37542.1| aspartate--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 600

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 43/145 (29%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  +              P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEEARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGPEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFP 564



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 64/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   ++                         +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHIFKMTIGVELDATFPVMPYSEAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANTKDGRVA 323


>gi|311742338|ref|ZP_07716147.1| aspartate--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313966|gb|EFQ83874.1| aspartate--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 591

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 26/182 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            +  R+ + +  R+   ++ F+E+++ +L   +P      R 
Sbjct: 116 EARLKYRYLDLRRSGPAAAIRLRSKVNAVARDVLAQHDFVEVETPTLTRSTPEGA---RD 172

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+
Sbjct: 173 FVVPARL--RPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQPEFTQLD 230

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + +M     I              ++ ++    +    IT A+A  RY +  
Sbjct: 231 IEMSFVDADDVMALAEQIYVAL----------WRLIDVELPAPFPRITYADAMRRYGSDK 280

Query: 182 LG 183
             
Sbjct: 281 PD 282



 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 9/91 (9%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACLT-E 315
            + +++     EL      +     Q+  F           +E    D+    L      
Sbjct: 465 AQAYDIVCNGNELGGGSVRIHREDVQKQVFAI------MGIDEAEAEDKFGFLLDAFRFG 518

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   GIA G+DR   L++G ++I EVI  P
Sbjct: 519 APPHGGIAFGWDRTCALLSGVDSIREVIAFP 549


>gi|72080582|ref|YP_287640.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 561

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 66/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L  R  I   +R +  +N FIEI++  L   +P      R+F      +   
Sbjct: 117 RRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEG---ARSFLVPTRQKGKF 173

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +  EK F FA  +R+ +     Q EF  L+      ++E++
Sbjct: 174 ---FALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDRQFEFLQLDLEFGFATFEKI 230

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            ++   +IR            +  +  N   +   +T  EA   Y   D           
Sbjct: 231 SEEIEALIRDL----------WTKIFPNLAIDFPKLTYFEAIKNY-GTDKPDLRFETKLF 279

Query: 193 DRHLLYLQ 200
           D   L   
Sbjct: 280 DLDFLNDI 287



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 12/157 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L  L A++  +       ++ I +  L E    N   +                +  P 
Sbjct: 382 ALRNLVAKKYKLINEDQFKFTWIINWPLFELDINNKLTSAHHPFTAPTLESQQFLHKNPL 441

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                + ++L     EL +    + +   Q+  F         +  +   I   F   L 
Sbjct: 442 KV-QAQAYDLVLNGFELGSGSIRIHNAELQKQVFTI-------LGLDQDQIHTQFGALLR 493

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                +P   G A G DRL+M++   N+I +VI  P 
Sbjct: 494 AFNYGVPPHGGFAFGLDRLIMILRKTNSIRDVIAFPV 530


>gi|239947034|ref|ZP_04698787.1| aspartyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921310|gb|EER21334.1| aspartyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 605

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 61/195 (31%), Gaps = 18/195 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ I S +R       F E  +  L   SP      R F   
Sbjct: 128 KHRFLDLRREKLHNNIILRSQIISHIRHLMTARGFTEFQTPILTASSPEG---ARDFLVP 184

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+  
Sbjct: 185 SRMH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  +           I    E     +F+         +    I   E+  +Y   D  
Sbjct: 242 MSFVT--------QEDIFSTIEPVMHDLFTKFTDEKVSETPFVRIPYNESMLKY-GSDKP 292

Query: 184 TTLDNPDQPDRHLLY 198
              +     D   ++
Sbjct: 293 DLRNPIIIADVTEIF 307



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA----PESALANIYPADPR 257
           ++  +       +  I      E  E    I+        P                   
Sbjct: 418 EELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELLEL 477

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT 314
              ++++    IEL +       P      F          Y+E   +D+ F   +    
Sbjct: 478 TAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSI------AGYSEE-KVDKRFGGMIRAFK 530

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 531 FGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 570


>gi|111220663|ref|YP_711457.1| aspartate tRNA synthetase [Frankia alni ACN14a]
 gi|111148195|emb|CAJ59864.1| aspartate tRNA synthetase [Frankia alni ACN14a]
          Length = 618

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 63/188 (33%), Gaps = 19/188 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
              R +  L  R+ +  ++R       F+E+++  L   +P      R F          
Sbjct: 153 RRERMQRNLRTRSAVLGAMRAALAPLDFVEVETPLLMPSTPEG---AREFIVPSRQ---F 206

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G ++ F FA   R+ +     Q EFT L+   +    + 
Sbjct: 207 PGSFYALPQSPQLFKQLLMVGGTDRYFQFARCLRDEDLRADRQYEFTQLDLEMSFVDQDD 266

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++      +  AA                     E IT  E+  R+  +D        + 
Sbjct: 267 VLDVISAAVLAAARAVRTDTVP----------PIERITWHESMNRF-GVDKPDLRFGMEL 315

Query: 192 PDRHLLYL 199
            +   ++ 
Sbjct: 316 VELTAIFA 323



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 46/127 (36%), Gaps = 9/127 (7%)

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
           P  G +       +P   + L          ++ ++L     EL +    + +   Q+  
Sbjct: 459 PKPGHHP--FTRPHPDDIAKLE--SEPLAVRSRAYDLVLNGWELGSGSIRIHESALQQRI 514

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F           +E       FL       P   G A+G DRLV ++ G  NI EVI  P
Sbjct: 515 F----GLLGITPDEANARFGFFLTPFGYGAPPHGGFAVGIDRLVAILAGEENIREVIAFP 570

Query: 347 FSQSNQE 353
            +QS  +
Sbjct: 571 KTQSGLD 577


>gi|313665222|ref|YP_004047093.1| aspartate--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949402|gb|ADR23998.1| aspartate--tRNA ligase [Mycoplasma leachii PG50]
          Length = 575

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 74/225 (32%), Gaps = 15/225 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L+ R  I   +R Y  +  F+E+++      +P      R F     +    
Sbjct: 128 RRQIMQNNLITRAKINHIIRNYLTDLNFLEVETPYFAKSTPEG---ARDFLVPSRLNK-- 182

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ +G ++ +     +R+ +     QPEFT L+   +  + E +
Sbjct: 183 NKFYALPQSPQLFKQLLMISGIDRYYQIVRCFRDEDLRIDRQPEFTQLDLEMSFATSEDV 242

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M+   ++I+   +            N         ++  +A   Y +       D     
Sbjct: 243 MQISESLIKKILKEV---------KNFEIKEPLLRLSYKDAIDLYGSDKPDLRYDLKIHT 293

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
              +      +  +   +    +    ++L +K    L       
Sbjct: 294 LNDIFKNSDIKMFLDSQNKYIRAVCIDQLLTKKQLEELNQQAKQF 338



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 58/181 (32%), Gaps = 7/181 (3%)

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I   +   +   I      +   Q    +    A+   +    D     +    L E  E
Sbjct: 370 IKEFDIKNKATIILNIGKYEEISQLMGAIRINLAKMFNLETKDDFKLLWVVDFPLFEFSE 429

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                         P  ES               ++L     E+      + +   Q+  
Sbjct: 430 QENRYVAAHHPFTSPKEESLADFDTNKKDALACAYDLVMNGFEIGGGSQRITNSEIQQRM 489

Query: 288 FEK-EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           F+  E+ +K+    E       F+       P  +GIA G DR+ M++T +N+I +VI  
Sbjct: 490 FDAVELSQKQV---EANF--GWFMNAYKYGAPYHAGIAWGLDRISMILTDSNSIRDVIAF 544

Query: 346 P 346
           P
Sbjct: 545 P 545


>gi|218295028|ref|ZP_03495864.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244231|gb|EED10756.1| aspartyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 581

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 9/141 (6%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYP--APESALANIYPADPRFTKR--FELYACNIELCN 273
           F  ++   +    G         +P  +P      +  +DP   +   ++L    +E+  
Sbjct: 420 FLWVVDFPLLEWDGERGGWTYMHHPFTSPHPEDLPLLESDPGRVRALAYDLVLNGVEVGG 479

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVML 332
               + DP+ Q   F            E       FL  L    P   GIA G DRL+ +
Sbjct: 480 GSIRIHDPLLQAKVF----ALLGIGEEEQKEKFGFFLEALAYGAPPHGGIAWGLDRLLAM 535

Query: 333 VTGANNINEVIWTPFSQSNQE 353
           +TG+ +I EVI  P ++  ++
Sbjct: 536 MTGSPSIREVIAFPKNKEGKD 556



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 9/209 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  L  R+ +  ++ +Y     FI++++  L   +P      R F      +  +    Y
Sbjct: 141 QENLRLRHRVIKAIWDYLDREGFIQVETPFLTKSTPEG---ARDFLVPYRQEPGL---FY 194

Query: 78  -LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   + L+ AG ++ F  A  +R+ +     QP+FT ++   +    E ++   
Sbjct: 195 ALPQSPQLFKQMLMVAGFDRYFQIARCFRDEDLRADRQPDFTQMDLEMSFVEVEDILTLN 254

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             ++      A            +     E     +   R+  ++L        +    L
Sbjct: 255 EGLMAHVFREALGVELPLPFPRLSYEEAMERFGSDKPDLRF-GLELKEVGPLFRESPFDL 313

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
                +   +RV    +  +I       K
Sbjct: 314 FRQAERVKALRVPKALSRKEIAFLEEEAK 342


>gi|116515132|ref|YP_802761.1| AspS [Buchnera aphidicola str. Cc (Cinara cedri)]
 gi|116256986|gb|ABJ90668.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 571

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 81/230 (35%), Gaps = 24/230 (10%)

Query: 16  YRRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR         R+ I + +R +F++ +F+EI++  L   +P      + +     +  +
Sbjct: 130 LRRFYMFHKLQTRSKITTIIRNFFIKKKFLEIETPILTRSTPEG---AKDYLVYSRL--Y 184

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             K   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   A +  + 
Sbjct: 185 PGKYFALPQSPQLFKQLLMISGIDRYFQIAKCFRDEDLRSDRQPEFTQIDIEIAFKKKKF 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L K    +I+      N               + + IT  E+  +Y              
Sbjct: 245 LQKLINKLIKKLWLKINNYTIK----------KIKNITYKESILKYGTDKPDLRNPIQFV 294

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               +     ++               +RI+  KI   +       + +Y
Sbjct: 295 ELYDIFNNFYKKF-----FPWLLIKNINRIISIKIPEGIKKIRDNKIYKY 339



 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 71/195 (36%), Gaps = 10/195 (5%)

Query: 158 NCNPFSEPEYITVAEAFARYANI--DLGTTLDNPDQPDRHLLYLQAQQAGIRVAH---DD 212
           N N FS+ +  T+ E F + + I  D+   +        ++  L  ++ GI +       
Sbjct: 367 NRNIFSKIDKKTLKEFFLKTSAINGDIIFIIAEKYNIANNISNLLRKKIGIDLKITNLKK 426

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
                 ++  + K++    +         P   S    +       +  F+L     E+ 
Sbjct: 427 ICPVWITKFPLFKLDKKNNLKSVHHPFTSPEKNSKNIELLNPLKIISSAFDLVINGYEIG 486

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVM 331
              + + +   Q   F      K K           F+  L    P   G+A+G DRLVM
Sbjct: 487 GGSERIYNYQLQIKIFNILKINKNKQ----KKKFGFFINSLQYGAPPHLGLALGLDRLVM 542

Query: 332 LVTGANNINEVIWTP 346
           L+T  N I++VI  P
Sbjct: 543 LLTNCNTISDVIAFP 557


>gi|325294844|ref|YP_004281358.1| aspartyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065292|gb|ADY73299.1| aspartyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 611

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 81/220 (36%), Gaps = 8/220 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ +    R  F E  FIEI++  L   +P      R F     I  + 
Sbjct: 157 RRKKMMDNIIFRHKLYQITRNVFNEEGFIEIETPFLTKSTPEG---ARDFLVPSRI--YP 211

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            K   L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT +++  +    + +
Sbjct: 212 GKFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEDLRADRQPEFTQVDFEMSFVREKDV 271

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     ++R   +           +    + E       +       ++L    D  ++ 
Sbjct: 272 MNIAEKVLRRLYKELLG--IEIGEIPVMSYDEAMSRFGTDRPDTRFGLELKEITDIAEKC 329

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              +  +  +  GI  A +       SR  I+ +   +GI
Sbjct: 330 SFKVFRMVTENGGIVKAINFKGGATLSRKEIDDLTKFVGI 369



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 38/131 (29%), Gaps = 5/131 (3%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           I    + E  E              P  E     +        + +++    +E+     
Sbjct: 451 IVDFPMFEWNEDENRWEALHHPFTSPKEEDVEKLLEDPGKVRARAYDMVLNGVEVGGGSI 510

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTG 335
            +     Q   F    +       E        L  L    P   G+A G DRL  ++ G
Sbjct: 511 RIYREDIQEKVF----KVIGLSDEEAKERFGFLLEALKYGAPPHGGMAFGLDRLCAIMRG 566

Query: 336 ANNINEVIWTP 346
             +I +VI  P
Sbjct: 567 EESIRDVIAFP 577


>gi|259503167|ref|ZP_05746069.1| aspartate-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259168882|gb|EEW53377.1| aspartate-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 595

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R+ + S +  Y+    F+++++  L   +P     +I            
Sbjct: 134 RRPEMMKNLKLRSKVASIVHNYYDGEGFLDVETPDLTRSTPEGARDYIVPSRVYPGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+AAG +K +  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 194 LPQ------SPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQPEFTQIDTEMSFATPED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I+   +              +  +    +   EA  +Y   D   T      
Sbjct: 248 IQTVTEGLIKRVMKEVKG---------IDVKTPFPRMEWQEAMDKY-GSDKPDTRFGMLI 297

Query: 192 PD 193
            D
Sbjct: 298 HD 299



 Score = 91.6 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 52/154 (33%), Gaps = 7/154 (4%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +       +  + +  + E  E                 E         D
Sbjct: 408 LRRAIAEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGED 467

Query: 256 PR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           P     + +++     E+      + DP  Q    +     K++   E        L  L
Sbjct: 468 PHKAHAQSYDIILNGQEIGGGSIRIHDPKVQEKVLKALGYTKERA--EARF--GFLLKAL 523

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           T  MP   G+A G DR VML+  A+NI +VI  P
Sbjct: 524 TMGMPPEGGLAFGLDRWVMLLAEADNIRDVIPFP 557


>gi|290579838|ref|YP_003484230.1| putative aspartyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996737|dbj|BAH87338.1| putative aspartyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 583

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 69/194 (35%), Gaps = 6/194 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L  R+ +  ++R+Y  +  FI++++  L   +P      R F     +    
Sbjct: 131 RREKMTANLKLRHQVTKTIRDYLNQADFIDVETPYLTKSTPEG---ARDFLVPSRVFK-- 185

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +  S E +
Sbjct: 186 NQFYALPQSPQMLKQLLMGAGLERYYQIVRCFRDEDLRGDRQPEFTQVDLEMSFVSEEDV 245

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +++   + +     +      +           +   R+A      T  +    
Sbjct: 246 RNLVEGMLKAVVKASKGIELTEAFPIISYAQAMRRFGSDKPDTRFAMELKDLTELSRGNT 305

Query: 193 DRHLLYLQAQQAGI 206
              L     ++ G+
Sbjct: 306 SLFLQKGLKKENGV 319



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 51/149 (34%), Gaps = 7/149 (4%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A+   +       +  +    L+E  E               A E         +   +
Sbjct: 410 LAKDLELIDNDKLNFLWVVDWPLLEWNEDLNRYQAMHHPFTQGAFEDGSDWKENPEKMMS 469

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE-DFLACLT-EMP 317
           + +++     E+      + +   Q   FE    +K     E Y  D   FL  L    P
Sbjct: 470 RAYDIVLNGYEIGGGSLRIHERSAQEAMFELLGMKK-----EDYERDFGFFLEALEYGFP 524

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              G+A+G DRLVM++    NI EVI  P
Sbjct: 525 PHGGLALGLDRLVMILAEEENIREVIAFP 553


>gi|291458448|ref|ZP_06597838.1| aspartate--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418981|gb|EFE92700.1| aspartate--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 582

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 58/168 (34%), Gaps = 8/168 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  ++ R  I   +R +  EN F+EI++ +L   +P      +            
Sbjct: 121 RRPELQKRIMTRARISFLIRRFLTENGFLEIETPTLIKSTPEGARDFLVPSRLHHGSFYA 180

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 181 LPQ------SPQLLKQLLMVSGMDRYFQLARCYRDEDLRADRQPEFTQVDMELSFADVED 234

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +++    +++           +                  +   R+  
Sbjct: 235 VLELNERLLQFIFREVCGVELTLPLRRMRWIDAMNDYGSDKPDLRFGM 282



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 68/240 (28%), Gaps = 13/240 (5%)

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           A    +++      +  C A+              + F++       E          G 
Sbjct: 318 AGMPRKKIDAYTDFVKECGAKGLAYLSLMEDGSCKSSFAKFLREGEKERICEAMRAKAGD 377

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD--------IFSRILIEKIEPNLGINCCT 236
            L      DR +++       + +  D +  D        +    + E  E         
Sbjct: 378 LLFLVSDRDRRVVWNSLGALRLSLGRDFSLIDEKAWSFLWVTEFPMFEYSEELGRFQAMH 437

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P  E              K +++     EL      +     Q    EK    ++
Sbjct: 438 HPFTMPMEEDLPLLDTDPGAVRAKAYDIVLNGTELGGGSVRIHQAEVQERMLEKLGFTRE 497

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
           +            +      +P  +G+A G DRL M + G++ I +VI  P  +   + +
Sbjct: 498 R----AMEQFGFLMQAFRYGVPPHAGLAYGLDRLAMWMVGSDTIRDVIAFPKGKDGSDAM 553


>gi|187922663|ref|YP_001894305.1| aspartyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|238689468|sp|B2SX42|SYD_BURPP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|187713857|gb|ACD15081.1| aspartyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 599

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 44/145 (30%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  E +            P  E              K +
Sbjct: 424 KANGLVETGWKPLWVVDFPMFEYDEEDNRYVAAHHPFTSPKDEHLEYLETDPARCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKINAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFP 564



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y     FI+I++  L   +P     ++    T       
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDSLGFIDIETPMLTKSTPEGARDYLVPSRTNP----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  S ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQIVKCFRDEDLRADRQPEFTQIDCETSFLSEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +         +                +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHVFKETIGVTLDEKFPVMLYSEAMRRFGSDKPDLRVK-LEFTDLTDAVRD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANTKDGRVA 323


>gi|110004665|emb|CAK99000.1| probable aspartyl-trna synthetase protein [Spiroplasma citri]
          Length = 577

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 77/204 (37%), Gaps = 28/204 (13%)

Query: 11  NRDFHYR------RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
             D   +      RRP + +    RN +  ++R++   +QFI+I++  L   +P      
Sbjct: 117 LEDVRMKYRYLDLRRPIMQQKIMLRNQLVQTIRQFCQVHQFIDIETPILNKSTPEG---A 173

Query: 60  RAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           R F     +        Y L  SP+   + L+ AG +K F  A  +R+ +     QPEFT
Sbjct: 174 RDFLVPSRLN---PHHFYALPQSPQLFKQLLMLAGFDKYFQIAKCFRDEDLRSDRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   +  + + +M     +     +           +     +   ++   EA  +Y 
Sbjct: 231 QLDLEMSFVTRDDIMDFVETLFHTIMQDV---------MKVKIKTPFLWMDYDEAIEKY- 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQ 202
             D   T  +    D   ++ + +
Sbjct: 281 GTDKPDTRYDLQLFDAKDIFAKTE 304



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A+   +   ++  +  I +  L E  + N            P  E         
Sbjct: 400 AVRVALAKMFDLIPLNEYHFLWIVNWPLYEWSDENNRYEAAHHPFTAPTSEFIDNFEQNM 459

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  ++L     E+      +     Q   F+           E       FL    
Sbjct: 460 ATARADAYDLVLNGYEIGGGSIRIHQNEVQTRMFKSLQLS----NQEIANKFGWFLNAFN 515

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +P   GIA G DRL M++T + +I +VI  P
Sbjct: 516 YGVPPHGGIAFGLDRLAMILTNSESIRDVIAFP 548


>gi|27904787|ref|NP_777913.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29427402|sp|P59422|SYD_BUCBP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|27904185|gb|AAO27018.1| aspartyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 576

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 14/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +   +      I +  L +K E N  I+        P       +I   
Sbjct: 410 KLRIELGKDLNLIDYNSWKPLWITNFPLFKKNELNQYISTHHPFTA-PKYMKIDTSITNY 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFL 310
           +      ++L     E+ +    + D   Q+  F       + +K             FL
Sbjct: 469 EEIVADSYDLVINGYEIGSGSVRIHDLELQKTVFNILGINTVLQKNNFN--------FFL 520

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L    P  +GIA+G DR+ ML+T ++N+ +VI  P
Sbjct: 521 NALKYGTPPHAGIALGLDRITMLLTNSHNLRDVIAFP 557



 Score = 79.3 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 60/162 (37%), Gaps = 19/162 (11%)

Query: 34  EYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
            +  +N+F++I++  L   +P     +I            + +      SP+   + L+ 
Sbjct: 150 NFMKKNKFLDIETPILTKSTPEGARDYIVPSRIHKNKYYALPQ------SPQLFKQLLMI 203

Query: 92  AGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI 151
           +G ++ +  A  +R+ +     QPEFT ++   +  + +++ K    +I           
Sbjct: 204 SGIDRYYQIAKCFRDEDLRSDRQPEFTQIDIEVSFLNAKKVRKIIERMITS--------- 254

Query: 152 FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
             +  +      + + ++  +A   Y   D     +     D
Sbjct: 255 -VWNKIINVHLKKFQKLSFYDAIKMY-GTDKPDLRNPIQLID 294


>gi|331001293|ref|ZP_08324919.1| GAD domain protein [Parasutterella excrementihominis YIT 11859]
 gi|329569020|gb|EGG50816.1| GAD domain protein [Parasutterella excrementihominis YIT 11859]
          Length = 277

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 45/146 (30%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +  G+          +    + E  E       C      P        +   +  F K 
Sbjct: 102 KSHGL-FEEGWRPLWVIDFPMFEYDEEEERWVACHHPFTSPKDGDEDKLVTDPENCFAKA 160

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     E+      +     Q   F       K    E        L  L    P   
Sbjct: 161 YDMVLNGWEIGGGSIRIHKADVQSKVF----NALKIGPEEARAKFGFLLDVLQYGAPPHG 216

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR+V ++ GA++I +VI  P
Sbjct: 217 GLAFGLDRIVTMMCGADSIRDVIAFP 242


>gi|86158955|ref|YP_465740.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|97196505|sp|Q2IKX7|SYD_ANADE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|85775466|gb|ABC82303.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 603

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 60/179 (33%), Gaps = 17/179 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
                +  L+ R  +    R YF +  F+E+++  +   +PG   +   F     +    
Sbjct: 140 RRAPLQQTLMTRAKVNHLTRNYFTDKGFLELETPFMVKYTPGGARN---FLVPSRLN--- 193

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   +  + AG ++ F     +R+ +     QPEFT ++   +      
Sbjct: 194 PGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQPEFTQIDVEMSFVEQND 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +      ++    +                    + +   E+ A+Y N       D P 
Sbjct: 254 VFDVMEGLVVKLWKEVLGIEIP---------RPFQRMPFEESMAKYGNDKPDLRFDMPH 303



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 54/161 (33%), Gaps = 13/161 (8%)

Query: 200 QAQQAGIRVAHD----DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            A++ G+   +       +  + +  L E  E +            P             
Sbjct: 423 LAKRMGLIPEYGSGGAWRFLWVVNPPLFEYDEESGQWAAAHHAFTRPHDSDLQFLESDPG 482

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACL 313
                R++L     E+      L DP  Q   F      K       E        L  L
Sbjct: 483 KVNCYRYDLVLNGFEIGGGSIRLHDPEVQARVF------KAMGISDEEARSKFGFLLDAL 536

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   GIA+G DRLVML+TGA ++ +V+  P +Q   +
Sbjct: 537 KMGAPPHGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTD 577


>gi|297569982|ref|YP_003691326.1| aspartyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925897|gb|ADH86707.1| aspartyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 593

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 80/261 (30%), Gaps = 21/261 (8%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP     LL R+    ++R+Y     F+EI++  L   +P     ++            
Sbjct: 140 RRPAMAHNLLLRHQACQAIRQYLNGEDFLEIETPVLTRSTPEGARDYLVPSRVNPGRFFA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG E+ +     +R+ +     QPEFT ++   +    E+
Sbjct: 200 LPQ------SPQLFKQLLMVAGMERYYQIVRCFRDEDLRADRQPEFTQVDMELSFVGEEE 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     +++        +                 +T AEA AR+      T       
Sbjct: 254 VMAVAEGMMKALFAATLGREL---------APPFPRMTYAEAMARFGTDRPDTRFGLELV 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
               ++     +    +A         +             +      ++ A   A   I
Sbjct: 305 ELTEVVKNCGLKVFREIADKGGMIKSINAKGCADFSRKDLDDLTAYAGQFGAKGLAWVKI 364

Query: 252 YPADPRFTKRFELYACNIELC 272
                  +   + +       
Sbjct: 365 KEGGEWQSPIAKFFTEEERQA 385



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 67/214 (31%), Gaps = 16/214 (7%)

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP---DQPDRHLL 197
           +  A V  ++   +Q+     F+E E   + +      +  L    D P         L 
Sbjct: 357 KGLAWVKIKEGGEWQSPIAKFFTEEERQAMMDTMQAEKDDLLFFVADQPAIVHGALAELR 416

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
              A++  +    D ++  +    L+E                 P  E            
Sbjct: 417 LELARRLELVSKEDFSFVWVTDFPLLEYDHEAKRHVAVHHPFTAPREEDLALLDSEPGKV 476

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACL 313
            ++ ++L     E+      +     Q   F      + +   K            +  L
Sbjct: 477 RSRAYDLVLNGTEIGGGSIRIHHKEMQERVFAALGISQEEINDKFD--------FLVRAL 528

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DRL+M++ G ++I +VI  P
Sbjct: 529 ELGAPPHGGLAFGLDRLMMIIAGRDSIRDVIAFP 562


>gi|238063887|ref|ZP_04608596.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237885698|gb|EEP74526.1| aspartyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 606

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 9/160 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP--APESALANIY 252
                 A++A +      T+  +    + E+   + G         +P  +P +   + +
Sbjct: 403 AARIEIAKRAKLIDESAWTFCWVVDAPMFERTSDDSGGAGGWTAVHHPFTSPNAEWVDRF 462

Query: 253 PADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
              P       +++     E+      +     Q+  F+           E        L
Sbjct: 463 EEAPDRALAYAYDIVCNGNEIGGGSIRIHRGDVQQRVFD----LLGITPEEAQDKFGFLL 518

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                  P   GIA G+DR+ ML+ GA++I EVI  P ++
Sbjct: 519 EAFKYGAPPHGGIAFGWDRVCMLLAGADSIREVIAFPKTR 558



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 63/192 (32%), Gaps = 26/192 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   + R            +  R+      R    +  F+EI++ +L   +P      R 
Sbjct: 116 DIRLKYRYLDLRRGGPARAMRLRSRANQLARGVLHDRDFLEIETPTLTRSTPEGA---RD 172

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F   + +Q        L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+
Sbjct: 173 FLVPVRLQ--PGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQPEFTQLD 230

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  + + ++     I+                           IT  +A ARY   D
Sbjct: 231 IEMSFVTEDDVIDLGEAIVSALWSDLAGYEIP---------RPIPRITWHDAMARY-GSD 280

Query: 182 LGTTLDNPDQPD 193
                   +  +
Sbjct: 281 KPDLRYGVELTE 292


>gi|167561588|ref|ZP_02354504.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167568824|ref|ZP_02361698.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 600

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 44/145 (30%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  + +            P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREDVQSKVF----RALKIGAEEAQAKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFP 564



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 70/184 (38%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +     ++IR   +           ++    ++   +  +EA AR+ +   DL   L+  
Sbjct: 247 IRDLFEDMIRHIFKTT---------IDVELAAKFPVMPHSEAMARFGSDKPDLRVKLEFT 297

Query: 190 DQPD 193
           +  D
Sbjct: 298 ELTD 301


>gi|167763074|ref|ZP_02435201.1| hypothetical protein BACSTE_01441 [Bacteroides stercoris ATCC
           43183]
 gi|167699414|gb|EDS15993.1| hypothetical protein BACSTE_01441 [Bacteroides stercoris ATCC
           43183]
          Length = 585

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 69/199 (34%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R+Y     FIE+++  L   +P      R F     +    
Sbjct: 132 RRAAVRKNLELRHKMTIEVRKYLDSKGFIEVETPLLIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    + +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVQQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++    + +   +       +            + +  A+A  +Y   D           
Sbjct: 247 IELFEGMAKYLFKELRGVELT---------EPFQRMPWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFSVFDN 312



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      I    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGNQLGLRDKNKFALLWIVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    IE+      + D   Q   FE           E       FL    
Sbjct: 465 AAVRADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEIL-----GFTPEKAEEQFGFLMNAF 519

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V +  G ++I + I  P
Sbjct: 520 KFGAPPHGGLAYGLDRWVSIFAGLDSIRDCIAFP 553


>gi|73667286|ref|YP_303302.1| aspartyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|97196669|sp|Q3YRF1|SYD_EHRCJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|72394427|gb|AAZ68704.1| aspartyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 590

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 69/217 (31%), Gaps = 9/217 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  ++ R+ + + LR+      FIEI +  L   SP     ++            
Sbjct: 135 RRDKVKHNIILRSKVIAELRKSMENMGFIEIQTPILTSSSPEGARDYLVPSRIHHGKFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  + E
Sbjct: 195 LPQ------APQLFKQILMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDMEMSFVTQE 248

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      ++       + K    +    +  +   Y    +   R   I    T    D
Sbjct: 249 DVFNVIEPVLLNIFSKFSSKTIHKEFPRISYHNAMLYYGSDKPDLRNPLIIQDVTEIFRD 308

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
                      +   +R       ++        KIE
Sbjct: 309 SQFNIFNSNIKKGMVVRAIPAPKTANNPRSFFDNKIE 345



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 15/177 (8%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
             T D   +    +  +   +  +       +  +      +  +    I         P
Sbjct: 398 SETEDKAAEFAGEIRTILGTELNLIEPDTFRFCWVVDFPYFKYDKKEKSIGFFHNPFSMP 457

Query: 243 APESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
             +  L  +   DP      ++++    IE+ +              F          Y 
Sbjct: 458 --QGGLEALNNQDPLSILAYQYDIVCNGIEISSGAIRNHKLDIMYKAFSI------AGYT 509

Query: 301 ETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           +   +D+ F           P   GIA G DR+VML+  A NI EVI  P +QS ++
Sbjct: 510 QEM-VDKKFNSLTRAFKFGAPPHGGIAPGIDRMVMLLADATNIREVICFPLNQSGED 565


>gi|213021628|ref|ZP_03336075.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 145

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 13/117 (11%)

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF----EK 290
                  P   +A       +      +++     E+      + +   Q+  F      
Sbjct: 2   MHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGIN 61

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E ++++K            L  L    P   G+A G DRL ML+TG +NI +VI  P
Sbjct: 62  EQEQREKFG--------FLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFP 110


>gi|256847120|ref|ZP_05552566.1| aspartyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715784|gb|EEU30759.1| aspartyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 590

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 67/181 (37%), Gaps = 16/181 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                   +  R+ + S +  Y+  N F+++++  L   +P      R F     +  + 
Sbjct: 132 RRPEMMKNMKLRSKVASIIHNYYDNNDFMDVETPDLTRSTPEG---ARDFLVPSRL--YP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+AAG ++ +  A  +R+ +     QPEFT ++   +  + E +
Sbjct: 187 GHFYALPQSPQLFKQLLMAAGVDRYYQMARCFRDEDLRGDRQPEFTQVDTEMSFATAEDI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                 +I         K    + +N +  +    +   EA  RY   D   T       
Sbjct: 247 QDMTEGLI---------KRVMKEALNVDVKTPFPRMEWQEAMDRY-GSDKPDTRFGMLIT 296

Query: 193 D 193
           D
Sbjct: 297 D 297



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 52/154 (33%), Gaps = 7/154 (4%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A +  +       +  + +  + E  E                 E         D
Sbjct: 406 LREKIAHEMDMIKPGQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGED 465

Query: 256 PR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           P     + +++     E+      + DP  Q   F+     K+    E        +  L
Sbjct: 466 PHKAHAQSYDIILNGNEIGGGSIRIHDPKIQEKVFKALGYTKE----EARARFNFLIKGL 521

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              MP   G+A GFDR VML+ GA+NI +VI  P
Sbjct: 522 ENGMPPEGGLAFGFDRWVMLLAGADNIRDVIPFP 555


>gi|227544925|ref|ZP_03974974.1| aspartate--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300910047|ref|ZP_07127507.1| aspartate--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185092|gb|EEI65163.1| aspartate--tRNA ligase [Lactobacillus reuteri CF48-3A]
 gi|300892695|gb|EFK86055.1| aspartate--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 600

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 72/217 (33%), Gaps = 8/217 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R+ + S +  Y+    F+++++  L   +P     +I            
Sbjct: 134 RRPEMMRNLKLRSKVASIVHNYYDNEGFMDVETPDLTRSTPEGARDYIVPSRVYPGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+AAG +K +  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 194 LPQ------SPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQPEFTQIDTEMSFATPED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I+   +                    +     +   R+  +    +    D 
Sbjct: 248 IQTVTEGLIKRVMKEIVGVDVKTPFPRMEWQEAMDKYGSDKPDTRFGMLIHDLSDIVKDS 307

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             +      A    +R       +D +SR  I K E 
Sbjct: 308 SFKVFANTVADGNYVRAIRVPGGADKYSRKDISKYEE 344



 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 52/154 (33%), Gaps = 7/154 (4%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +       +  + +  + E  E                 E         D
Sbjct: 408 LRRTIAEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGED 467

Query: 256 PR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           P     + +++     E+      + DP  Q    +     K++   E        L  L
Sbjct: 468 PHKAHAQSYDIILNGNEIGGGSIRIHDPKIQEKVLKALGYTKERA--EARF--GFLLKAL 523

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           T  MP   G+A G DR VML+  A++I +VI  P
Sbjct: 524 TMGMPPEGGLAFGLDRWVMLLAQADSIRDVIPFP 557


>gi|194467778|ref|ZP_03073764.1| aspartyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194452631|gb|EDX41529.1| aspartyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 600

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 72/217 (33%), Gaps = 8/217 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R+ + S +  Y+    F+++++  L   +P     +I            
Sbjct: 134 RRPEMMRNLKLRSKVASIVHNYYDNEGFMDVETPDLTRSTPEGARDYIVPSRVYPGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+AAG +K +  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 194 LPQ------SPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQPEFTQIDTEMSFATPED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I+   +                    +     +   R+  +    +    D 
Sbjct: 248 IQTVTEGLIKRVMKEIVGVDVKTPFPRMEWQEAMDKYGSDKPDTRFGMLIHDLSDIVKDS 307

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             +      A    +R       +D +SR  I K E 
Sbjct: 308 SFKVFANTVADGNYVRAIRVPGGADKYSRKDISKYEE 344



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 52/154 (33%), Gaps = 7/154 (4%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +       +  + +  + E  E                 E         D
Sbjct: 408 LRRAIAEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGED 467

Query: 256 PR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           P     + +++     E+      + DP  Q    +     K++   E        L  L
Sbjct: 468 PHKAHAQSYDIILNGNEIGGGSIRIHDPKIQEKVLKALGYTKERA--EARF--GFLLKAL 523

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           T  MP   G+A G DR VML+  A++I +VI  P
Sbjct: 524 TMGMPPEGGLAFGLDRWVMLLAQADSIRDVIPFP 557


>gi|300871060|ref|YP_003785932.1| aspartyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300688760|gb|ADK31431.1| aspartyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 587

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 72/211 (34%), Gaps = 28/211 (13%)

Query: 13  DFHYRRRPFLLKRNM----------IQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   + R   L+R            I ++ R++  +N FI++++  L   +P      R 
Sbjct: 124 DIRLKYRYLDLRRTKVFNNLYKRFEITNAFRKHLADNGFIDVETPILNKSTPEG---ARD 180

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     +        Y L  SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 181 FLVPSRLNAG---DFYALPQSPQIFKQILMIGGFERYYQVAKCFRDEDLRADRQPEFTQV 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + ++ +     ++    +            N +  +    +   +A   Y   
Sbjct: 238 DIETSFLNTDEFLSIMEKVVSNIVKDV---------YNIDLKTPFPRLNYYDAMEMY-GS 287

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
           D   T       +          A  + A D
Sbjct: 288 DKPDTRFELKLINVEEAVRGCDFAVFKNALD 318



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 53/159 (33%), Gaps = 15/159 (9%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A++  +       +  +    L E       I+        P PE             + 
Sbjct: 415 AEKLNLIDKDKLNFLWVVEFPLFEYDHKEKRISATHHPFTAPVPEDVAILESEPLKVRSD 474

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACL-TE 315
            ++L     E+      + D   Q   F+     E + K +            L  L   
Sbjct: 475 TYDLVLNGNEIGGGGQRIYDSKVQATIFKLLGIDEEKAKIRFG--------FLLDALKYG 526

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
            P   G+A G DR++ML+   ++I EVI  P  ++ + +
Sbjct: 527 APPMCGMAFGIDRVIMLLQKQDSIREVIAFP--KTQKGQ 563


>gi|311748783|ref|ZP_07722568.1| aspartate--tRNA ligase [Algoriphagus sp. PR1]
 gi|126577319|gb|EAZ81567.1| aspartate--tRNA ligase [Algoriphagus sp. PR1]
          Length = 584

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 63/188 (33%), Gaps = 21/188 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +    R+Y     F+E+++  L   +P      R F     +   
Sbjct: 132 LRRNVVREKLHLRHRMMQETRKYMDAEHFMEVETPVLIKSTPEG---ARDFVVPSRVN-- 186

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   A    E
Sbjct: 187 -PGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQE 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     + +                      E + +T A+A   Y N       D   
Sbjct: 246 DILSTFEGLTKHLFANVKGVELE----------EVKRMTYADAMKYYGNDKPDLRFDMKF 295

Query: 191 QPDRHLLY 198
                L  
Sbjct: 296 VELNELAQ 303



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 46/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +  G+R  +      +    L+E  E     +        P  E         
Sbjct: 404 ELRLKMGEDLGLRDRNVFKPLWVVDFPLLEWDEETERYHAMHHPFTSPKKEDIPLLDSDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                  ++L    +E+      + D   Q      ++  K       E        +  
Sbjct: 464 GAVRANAYDLVINGVEIGGGSIRIHDRATQ------QLMFKHLGFTDEEAQKQFGFLMEA 517

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                P   GIA GFDRL  +  G+++I + I  P
Sbjct: 518 FEYGAPPHGGIAFGFDRLCAIFGGSDSIRDYIAFP 552


>gi|302525826|ref|ZP_07278168.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302434721|gb|EFL06537.1| aspartyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 598

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 13/161 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP-----NLGINCCTILDR-YPAPESAL 248
                  ++ G+      ++  +    L   +E       +G    T +   + +P    
Sbjct: 399 AARDEIGRKLGLIDEDAWSFVWVVDAPLFAPVEDIGDDVAVGSGKWTAVHHAFTSPTPEW 458

Query: 249 ANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
            + +  DP       ++L     E+      +     Q+  F            E     
Sbjct: 459 IDKFEQDPGNALAYAYDLVCNGNEIGGGSIRIHREDVQKRVF----ALMGLGEEEAQEKF 514

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              L       P   GIA G+DR+VML+  A+++ +VI  P
Sbjct: 515 GFLLEAFQFGAPPHGGIAFGWDRIVMLLAKADSLRDVIAFP 555



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 26/196 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            +  R+ +    RE      F+EI++ ++   +P      R 
Sbjct: 120 EVRLKYRYLDLRRSGPAAAIRLRSEVSRVAREVLHAQDFVEIETPTMTRSTPEG---ARD 176

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+  G E+ F  A  +R+ +     QPEFT L+
Sbjct: 177 FLVPARL--KPGSWYALPQSPQLFKQLLMVGGMERYFQIARCYRDEDFRADRQPEFTQLD 234

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + ++     I++   ++   +I +              IT  EA A+Y +  
Sbjct: 235 IEMSFVEQDDVIAVGEAIVKALWKLIGHEIAT----------PIPRITYREAMAKYGSDK 284

Query: 182 LGTTLDNPDQPDRHLL 197
                D          
Sbjct: 285 PDLRFDLEITELTDFF 300


>gi|47459109|ref|YP_015971.1| aspartyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|47458438|gb|AAT27760.1| aspartyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 567

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 5/139 (3%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
             D  ++ + +  L E  +              P  E             ++ +++    
Sbjct: 403 KKDFAFTWVINWPLYEFDKEVNKFQAAHHPFTMPQLEYLDNFDKKPMEAKSRAYDIVLNG 462

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFD 327
            E+      + D   Q+  F   +   +K   E +   + FL       P   GIA+G D
Sbjct: 463 YEVGGGSIRINDLEIQKRMFRT-LGLSEKQIEEQF---DFFLTAFKYGFPPHGGIALGID 518

Query: 328 RLVMLVTGANNINEVIWTP 346
           RL+ ++T + +I +VI  P
Sbjct: 519 RLLSILTNSTSIRDVIAFP 537



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 75/218 (34%), Gaps = 17/218 (7%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +  +  R+ +  S+R +   N +I I++ +L          + F      +        L
Sbjct: 128 QENIRLRHKVTRSMRNFLDRNNYINIETPNLGRI--TPEGAKDFIVPSRKKGFF---FSL 182

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
             SP+   + L+A+G EK +  A A+R+ +     Q EFT L+   A+   E ++    N
Sbjct: 183 PQSPQLYKQLLMASGFEKYYQIARAFRDEKSRKDRQLEFTQLDIEMAYAKEEIVIHLIEN 242

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           + +      N           +       +   +A  +Y +       +   Q   HL+ 
Sbjct: 243 LFKEIFTDLN----------IDIKIPFPKMNYDDALNQYGSDKPDLRYEYKLQDFSHLIP 292

Query: 199 LQAQQ--AGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
               +    ++           ++   E +E     N 
Sbjct: 293 KFNSKVFKNVKSLKIIIIPYNITKKQFEFLEEEAKQNH 330


>gi|85373620|ref|YP_457682.1| aspartyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|123409673|sp|Q2NBQ6|SYD_ERYLH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|84786703|gb|ABC62885.1| aspartyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 604

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 14/167 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              R    ++ R+ + +S+R       F E  +  L   SP     +I            
Sbjct: 134 RRERLHRNIMLRSQVITSIRNRMTAQGFTEFQTPILAASSPEGARDYIVPSRLHPGTFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      +P+   + L+ AG ++ F  A  +R+ +      PEF  L++  +  + E 
Sbjct: 194 LPQ------APQMFKQLLMVAGFDRYFQIAPCFRDEDLRADRSPEFYQLDFEMSFVTQED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           + +    ++    E            +     E   I  AEA  +Y 
Sbjct: 248 VFQAIEPVLAGVFEEF------ANGKSVTKSGEFPRIPYAEAMLKYG 288



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 5/153 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    + E  E    I+        P  E               +
Sbjct: 417 EELGLIEQGCFKFCWIVDFPMFEYDEELKKIDFSHNPFSMPQGEMEALENKDPLEILAWQ 476

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSS 320
           +++     EL +       P      FE    +++ +  E   +    +       P   
Sbjct: 477 YDIVCNGYELSSGAIRNHKPEIMYKAFEIAGYDRETVDREFSGM----IEAFKLGAPPHG 532

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G A G DR+VML+    NI EVI  P +Q  Q+
Sbjct: 533 GSAPGIDRIVMLLADEPNIREVIAFPLNQKAQD 565


>gi|15604021|ref|NP_220536.1| aspartyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226169|sp|Q9ZE17|SYD_RICPR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3860712|emb|CAA14613.1| ASPARAGINYL-TRNA SYNTHETASE (aspS) [Rickettsia prowazekii]
 gi|292571740|gb|ADE29655.1| Aspartyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 605

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 58/175 (33%), Gaps = 17/175 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ + + +R   +   F E+ +  L   SP      R F   
Sbjct: 128 KHRFLDLRREKLHNNIILRSQVIAHIRHLMIARGFTELQTPILTSSSPEG---ARDFLVP 184

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             I        Y L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L+  
Sbjct: 185 SRIH---PGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDLE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +  +           I    E     +F+         +    I   E+  +Y 
Sbjct: 242 MSFVT--------QEDIFNTIEPVLYDLFTKFTNKTVSNTPFVRIPYNESMLKYG 288



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 50/167 (29%), Gaps = 15/167 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA----PESALAN 250
            +     ++  +       +  I      E  E    I+        P            
Sbjct: 411 KVRIKLGEELNLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKT 470

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF- 309
                     ++++    IEL +       P      F          Y     +++ F 
Sbjct: 471 TEELLALTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSI------AGY-SAEEVEQRFG 523

Query: 310 --LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             +       P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 524 AMIKAFRFGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 570


>gi|225011293|ref|ZP_03701749.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225004549|gb|EEG42515.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 586

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 20/185 (10%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R++  +  FI+I++  L   +P      R F     +    
Sbjct: 133 RRNPVKENLIFRHKVSMEVRKFLSDQGFIDIETPYLIKSTPEGA---RDFVVPSRMN--P 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A  + E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVTQEDI 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +      +    +              +T A A   Y   D        +  
Sbjct: 248 LNVFEGLTKHLLREIHGIDITS----------FPRMTYAHAMKTY-GNDKPDIRFGMEFA 296

Query: 193 DRHLL 197
           + + L
Sbjct: 297 ELNAL 301



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 48/164 (29%), Gaps = 13/164 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A + G+R         +    L+EK       +        P PE         
Sbjct: 404 ALRMEMATRLGLRDPKVFAPLWVIDFPLLEKDPETGHFHAMHHPFTAPKPEHLDLLDTDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q          E + K +            +
Sbjct: 464 AAVNANAYDLVLNGNEIGGGSIRIHDKNTQSKMLALLGFSEAEAKAQFG--------FLM 515

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  P   G+A G DRLV ++ G   I E I  P + + ++
Sbjct: 516 DAFEYGAPPHGGLAFGLDRLVAILGGQETIREFIAFPKNNAGRD 559


>gi|167585481|ref|ZP_02377869.1| aspartyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 600

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 44/145 (30%), Gaps = 5/145 (3%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +A   V        +    + E  + +            P  E              K +
Sbjct: 424 KANGLVEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAY 483

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
           ++     E+      +     Q   F    +  K    E        L  L    P   G
Sbjct: 484 DMVLNGWEIGGGSVRIHREEVQSKVF----RALKIGAEEAQLKFGFLLDALQYGAPPHGG 539

Query: 322 IAMGFDRLVMLVTGANNINEVIWTP 346
           IA G DR+V ++ GA++I +VI  P
Sbjct: 540 IAFGLDRIVTMMAGADSIRDVIAFP 564



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 69/184 (37%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +     ++IR   +           ++    +    +  +EA AR+ +   DL   L+  
Sbjct: 247 IRDLFEDMIRHIFKTT---------IDVELDATFPVMPYSEAMARFGSDKPDLRVKLEFT 297

Query: 190 DQPD 193
           +  D
Sbjct: 298 ELTD 301


>gi|39938614|ref|NP_950380.1| aspartyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|62287572|sp|Q6YR88|SYD_ONYPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|39721723|dbj|BAD04213.1| aspartyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 586

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 67/172 (38%), Gaps = 17/172 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            +   + FL++R+ I  S+R+  ++N F+E++++ L   +P     ++            
Sbjct: 132 RNPEVKHFLIQRHHITQSIRQTLLKNDFLELETLILSKSTPEGARDYLVPSRIYPGNFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   +  + AG E+ F  A  +R+ +     QPEF+ ++   +  + ++
Sbjct: 192 LPQ------SPQLFKQLYMIAGFERYFQVARCFRDEDLRSDRQPEFSQIDIETSFLNQDE 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +M     II                           +T  +AF  Y +    
Sbjct: 246 IMSLTEEIIV---------DLFANIWKKPLSQPFLRLTYQQAFELYGSDKPD 288



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 19/123 (15%)

Query: 240 RYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF------EKE 291
            +P        I  ++P+    K ++L     E+      + +P  Q   F      ++E
Sbjct: 448 HHPFTAPCDIAILKSNPQKALAKTYDLVWNGYEVGGGSLRINNPQTQELIFSLLGFSQEE 507

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +Q +              +  L    P   G+A+G DRLVML T  NNI +VI  P +QS
Sbjct: 508 VQTRFG----------FLVEALKYGTPPHGGLALGLDRLVMLFTKTNNIKDVIAFPKTQS 557

Query: 351 NQE 353
            ++
Sbjct: 558 AKD 560


>gi|315444699|ref|YP_004077578.1| aspartyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|315263002|gb|ADT99743.1| aspartyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 590

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 22/172 (12%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR      +  R+ + ++ R     + F+EI++ +L   +P      R F     +Q   
Sbjct: 129 RREVPGNAIRLRSKVNAAARGVLAAHDFVEIETPTLTRSTPEG---ARDFLVPARLQ--- 182

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    + 
Sbjct: 183 PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDADD 242

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +M     ++R                  +       I+ A+A  R+ +    
Sbjct: 243 VMAVSEEVLRAVWATIG----------YDLPLPLPRISYADAMRRFGSDKPD 284



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 38/116 (32%), Gaps = 5/116 (4%)

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                     P PES            +  +++     E+      +     Q   F   
Sbjct: 444 WTAMHHAFTAPTPESEATFDTDPGSALSNAYDIVCNGNEIGGGSLRIHRRDVQERVFAMM 503

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              K+    E        L   T   P   GIA G+DR+V L+ G ++I EVI  P
Sbjct: 504 GISKE----EAEDKFGFLLEAFTFGAPPHGGIAFGWDRIVALLAGLDSIREVIAFP 555


>gi|288800043|ref|ZP_06405502.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333291|gb|EFC71770.1| aspartate--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 588

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 75/204 (36%), Gaps = 19/204 (9%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R +    QFIE+++  L   +P      R F     +   
Sbjct: 131 LRRNTVRKNLELRHKMTILIRNFLDNLQFIEVETPLLIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVDQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++   ++ R   +            N    ++   +T  EA ++Y   D        + 
Sbjct: 246 VLEVFESMTRHLFKEVL---------NVELPAKLRQMTWHEAMSKY-GSDKPDLRFGMEF 295

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWS 215
            + H L     +  I    +    
Sbjct: 296 VELHDLLKGTGEFSIFNNAEYIGG 319



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 52/169 (30%), Gaps = 7/169 (4%)

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTIL 238
           I  G   +        L    A++ G+R  +      I    +     E    +      
Sbjct: 391 IMCGEKPNKTRTQLCALRLEMAERLGLRDKNKYECLWIVDFPLFEWSDEEQRLMATHHPF 450

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
                 +  L + +P   R  K ++     IE+      + D   Q   F+     K+  
Sbjct: 451 TLPNPDDIPLLDEHPEQVR-AKAYDFVCNGIEVGGGSMRIHDGALQEKMFQILGFSKE-- 507

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        +       P  +GIA G DR V +    ++I + I  P
Sbjct: 508 --EALAQFGFLINAFKYGAPPHAGIAFGLDRFVSIFAQLDSIRDCIAFP 554


>gi|260890443|ref|ZP_05901706.1| aspartate--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260860063|gb|EEX74563.1| aspartate--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 593

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 68/190 (35%), Gaps = 18/190 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++KRN +  S+R++  +N F++ID+  L   +P      R F     I    
Sbjct: 133 RRPKMLNNIIKRNDMLFSIRKFMNDNGFLDIDTPILAKATPEG---ARDFIVPSRIN--- 186

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           +   Y L  SP+   + L+ +G +K +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 187 KGDFYALPQSPQLFKQILMVSGVDKYYQLAKCFRDEDLRADRQPEFTQLDLEMSFIEQED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +       +            E ++  +A   Y   D          
Sbjct: 247 ILNVTEALAKQVFKDVTGIEITEN---------FERMSYDDAMNFY-GSDKPDLRFEMKL 296

Query: 192 PDRHLLYLQA 201
            D        
Sbjct: 297 IDLSKETQNC 306



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 47/149 (31%), Gaps = 5/149 (3%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           I          I   +     E N               +    +    D   T  +++ 
Sbjct: 420 IDKDSFKFLWVIDFPMFEWSEEENRYKAQHHPFTSIKQEDRKYLDSNELDKIKTDSYDMV 479

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAM 324
               E+      + +   Q   FEK    K+    E       FL  L   +P   G+A 
Sbjct: 480 LNGYEIGGGSIRIHEEELQEKVFEKLGLSKE----EQQDKFGFFLEVLKYGVPPHGGLAF 535

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G DR +M +   N+I EVI  P +   Q+
Sbjct: 536 GIDRWLMAILKENSIKEVIPFPKTNKGQD 564


>gi|291300018|ref|YP_003511296.1| aspartyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290569238|gb|ADD42203.1| aspartyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 1019

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 67/204 (32%), Gaps = 28/204 (13%)

Query: 3   QIP-SQPW------WNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P             +  +   R       L  R+      R    +  F+EI++ +L 
Sbjct: 538 PLPIDDHLEVGEDVRLKHRYLDLRRTGPATALRLRSEANRIARNLLHDEGFVEIETPTLT 597

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             +P      R F   + +Q        L  SP+   + L+ +G E+ +  A  +R+ + 
Sbjct: 598 RSTPEG---ARDFLVPVRLQ--PGTWYALPQSPQLFKQLLMVSGFERYYQIARCYRDEDF 652

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
               QPEFT L+   +  + + ++K    I+    +                      IT
Sbjct: 653 RADRQPEFTQLDIEASFVTEDDVIKLGEKIVAALWKDLAGYELP---------GPIPLIT 703

Query: 170 VAEAFARYANIDLGTTLDNPDQPD 193
             +A  RY   D        +  D
Sbjct: 704 WHDAMRRY-GSDKPDLRFGVELVD 726



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 64/175 (36%), Gaps = 12/175 (6%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQ-QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           D      + D  D   L   A+ + G R    DT    F  ++   +         ++  
Sbjct: 818 DAVFFAASTDTIDAQELLGAARLEIGRRCGLIDTDEWAFCWVVDAPMFGKTDEGWTSLHH 877

Query: 240 RYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
            + +P S  A  +  +P       +++     E+      + D   QR  F+        
Sbjct: 878 PFTSPNSDWARSFQDNPGEALAYAYDIVCNGNEIGGGSIRIHDGDTQRKVFDV------L 931

Query: 298 IYNETYPIDED--FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             +E    D+    L       P   GIA G+DR+  L++ A++I EVI  P S+
Sbjct: 932 GIDEAEAADKFGFLLEAFKYGPPPHGGIAFGWDRICALLSKADSIREVIAFPKSR 986


>gi|145591325|ref|YP_001153327.1| asparagine synthetase A [Pyrobaculum arsenaticum DSM 13514]
 gi|145283093|gb|ABP50675.1| aspartate-ammonia ligase [Pyrobaculum arsenaticum DSM 13514]
          Length = 353

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 99/333 (29%), Gaps = 43/333 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               +     ++RE+     F+E+ S  +   P  +  IR    +    D       + +
Sbjct: 48  VFKVQASALRAIREFLDSKGFVEVLSPVIG--PVTDPGIR--GAKQASIDFYGHEYKVMS 103

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC----LHQPEFTMLEWYRAHESYEQLMKDC 136
           S     K+ +AA   KI+  +   R           H  EF  ++      SY   M   
Sbjct: 104 SAILY-KQYMAASLGKIYFVSPNVRLEPLDSIYTGRHLVEFYQVDVEMYKASYIDAMDLA 162

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             ++                               +   +     LG  L    +P +  
Sbjct: 163 EELVSYVVRYI-----------------------RDVHGKELEEKLGRQLREFQRPFKRY 199

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
            + +A +   ++   +   +       + +  +   +    +  YP    A       DP
Sbjct: 200 PHKEAVEFVNKLGCRNPPKEELLWECEKLMSSHH--DAPLFIYDYPK--GARGFYDREDP 255

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ-EKKKIYNETYPIDEDFLACLTE 315
                   +   +       E +   E+ +  EK ++  ++   +      + FL    E
Sbjct: 256 ERPGVLRDFD--MLYPEGFGEAISGAEREYEPEKLVERIRQGGEDPARY--QWFLQMAKE 311

Query: 316 MPQ--SSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +    ++G  +G +RL   + G   + E    P
Sbjct: 312 LYPLQTAGFGIGVERLTRYLCGLRAVWEARPFP 344


>gi|148543955|ref|YP_001271325.1| aspartyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153350|ref|YP_001841691.1| aspartyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227364868|ref|ZP_03848915.1| aspartyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682507|ref|ZP_08162024.1| aspartate--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|166979991|sp|A5VJG4|SYD_LACRD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229559872|sp|B2G6X9|SYD_LACRJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|148530989|gb|ABQ82988.1| aspartyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224694|dbj|BAG25211.1| aspartyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070131|gb|EEI08507.1| aspartyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978346|gb|EGC15296.1| aspartate--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 600

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 72/217 (33%), Gaps = 8/217 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R+ + S +  Y+    F+++++  L   +P     +I            
Sbjct: 134 RRPEMMRNLKLRSKVASIVHNYYDNEGFMDVETPDLTRSTPEGARDYIVPSRVYPGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+AAG +K +  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 194 LPQ------SPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQPEFTQIDTEMSFATPED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I+   +                    +     +   R+  +    +    D 
Sbjct: 248 IQTVTEGLIKRVMKEIVGVDVKTPFPRMEWQEAMDKYGSDKPDTRFGMLIHDLSDIVKDS 307

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
             +      A    +R       +D +SR  I K E 
Sbjct: 308 SFKVFANTVADGNYVRAIRVPGGADKYSRKDISKYEE 344



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 52/154 (33%), Gaps = 7/154 (4%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +       +  + +  + E  E                 E         D
Sbjct: 408 LRRAIAEELDMIKPDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGED 467

Query: 256 PR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           P     + +++     E+      + DP  Q    +     K++   E        L  L
Sbjct: 468 PHKAHAQSYDIILNGNEIGGGSIRIHDPKIQEKVLKALGYTKERA--EARF--GFLLKAL 523

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           T  MP   G+A G DR VML+  A++I +VI  P
Sbjct: 524 TMGMPPEGGLAFGLDRWVMLLAQADSIRDVIPFP 557


>gi|329954874|ref|ZP_08295891.1| aspartate--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328526978|gb|EGF53989.1| aspartate--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 585

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R+Y     FIE+++  L   +P      R F     +    
Sbjct: 132 RRAAVRKNLELRHKMTIEVRKYLDSKGFIEVETPLLIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +       
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFV----Q 242

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
             D + +    A+   ++I   +          + +  A+A  +Y   D           
Sbjct: 243 QDDVIELFEGMAKYLFKEIRGVELTE-----PFQRMPWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFSVFDN 312



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      I    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGNQLGLRDKNKFALLWIVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    IE+      + D   Q   FE           E       FL    
Sbjct: 465 AAVRADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEIL-----GFTPEKAEEQFGFLMNAF 519

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V +  G ++I + I  P
Sbjct: 520 KFGAPPHGGLAYGLDRWVSIFAGLDSIRDCIAFP 553


>gi|312131843|ref|YP_003999183.1| aspartyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908389|gb|ADQ18830.1| aspartyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 581

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 73/222 (32%), Gaps = 14/222 (6%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +    R Y   N FIE+++  L   +P      R F     +   
Sbjct: 132 LRRNTVRQNLALRHKVAQQTRIYMDANDFIEVETPVLIKSTPEG---ARDFVVPSRMN-- 186

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    E
Sbjct: 187 -PGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQE 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++     +IR   +    K      V    +++   +  ++       +      D   
Sbjct: 246 DVLNMFEGLIRHLFKTV--KGIDLPEVPRMTYADAMRLYGSDKPDTRFGMQFVELNDLVQ 303

Query: 191 QPDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEKIEPNLG 231
                +        GI+     +        +      P +G
Sbjct: 304 GKGFQVFDDAELVVGIKADGCAEYTRKQIDELTDWVKRPQIG 345



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 49/158 (31%), Gaps = 15/158 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R   +     +    L+E  E              P PE         
Sbjct: 404 ELRLEMGSRLGLRNPEEYKVLWVLDFPLLEYGEEEQRWFAMHHPFTAPKPEDLALLDKDL 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                  ++L     E+      +     Q   FE      +E +++     E +     
Sbjct: 464 GQVRANAYDLVINGTEVGGGSVRIFQKELQGKMFEILGFTPEEAKKQFGFLMEAFE---- 519

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   P  +G+A GFDRL  +  GA++I + I  P
Sbjct: 520 -----YGAPPHAGLAFGFDRLCAIFGGADSIRDFIAFP 552


>gi|260946821|ref|XP_002617708.1| hypothetical protein CLUG_03152 [Clavispora lusitaniae ATCC 42720]
 gi|238849562|gb|EEQ39026.1| hypothetical protein CLUG_03152 [Clavispora lusitaniae ATCC 42720]
          Length = 672

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 21/213 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSL-QYSPGNETHIRA 61
           +P +  + +      +  L  R+   + +R      + F+EI++  L + +P      R 
Sbjct: 157 LPPKYRFLQLRTPFYQKTLRLRSKAVNEVRRVLVENHDFVEIETPLLFKSTPEG---ARE 213

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F       D       L  SP+   + L+++G  + F  A  +R+ +     QPEFT ++
Sbjct: 214 FLVPTRAPDRF---YALPQSPQQYKQILMSSGFTRYFQIARCFRDEDLRADRQPEFTQVD 270

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVA------------NQKIFSFQNVNCNPFSEPEYIT 169
              +  ++   +   ++ I  +                   +      + +       ++
Sbjct: 271 LEMSFVNHTDQVSTVIDDIIQSVWNKVGGLPIYKVDDDGTMVEVDFENHDHSKPAFNKLS 330

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
             EA ++Y  ID           D    +   +
Sbjct: 331 YIEALSKY-GIDKPDLRSALAFLDISKHFKPTK 362



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 10/122 (8%)

Query: 239 DRYPAPESALANI----YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             +P   +   +             + ++L    +E+      + DP  Q++ FE  ++ 
Sbjct: 535 THHPFTMAKSEDYELLATDPLKVHGEHYDLVINGVEVGGGSRRVHDPELQKYIFESILKI 594

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                   +      L  L+   P  +GIA+GFDRL  ++ G+ +I +VI  P +QS  +
Sbjct: 595 NNYENLFGH-----LLKALSMGCPPHAGIALGFDRLCAMLVGSASIRDVIAFPKNQSGTD 649

Query: 354 EI 355
            +
Sbjct: 650 PV 651


>gi|326924806|ref|XP_003208616.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Meleagris
           gallopavo]
          Length = 618

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 8/127 (6%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           + + K E    +         P P              ++ ++L     E+      + +
Sbjct: 459 LFLPKKENPSELESAHHPFTAPHPLDTNLLYSDPTKVRSQHYDLVLNGSEIGGGSIRIHN 518

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
             +QR   EK ++       E   +    L  L    P   GIA+G DRL+ L+ G+ +I
Sbjct: 519 AEQQRFVLEKVLK-------EDSEVLSHLLEALEFGAPPHGGIALGLDRLISLIVGSPSI 571

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 572 RDVIAFP 578



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYF-VENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F+++++ +L + +PG     + F               L 
Sbjct: 160 LRLRSQVVMRMREYLCNHHGFVDVETPTLFKRTPGG---AKEFLVPSREPGKF---YSLP 213

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      + +    +
Sbjct: 214 QSPQQFKQLLMIGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQAGIQRLIEGL 273

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+        +    +T  EA A Y   D   T       D
Sbjct: 274 LQY----------SWPEERGPITTPFPSMTYEEALADY-GTDKPDTRFGMKIVD 316


>gi|292610800|ref|XP_699804.3| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Danio rerio]
          Length = 660

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 19/191 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPL 76
           +  L  R+ +   +REY    + F+++++ +L + +PG     + F              
Sbjct: 205 QNNLRLRSQMVMKMREYLCNLHGFVDVETPTLFKRTPGG---AKEFVVPSGDPGKF---Y 258

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L  SP+   + L+ AG ++ F  A  +R+       QPEFT ++   +      +M   
Sbjct: 259 SLPQSPQQFKQLLMVAGIDRYFQLARCYRDEGSKPDRQPEFTQVDIEMSFVDQAGVMSLI 318

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
                          FS+             +T  EA   Y  +D   T       D   
Sbjct: 319 E----------GLVQFSWPEDKGQINVPFPTLTYEEAMRDY-GVDKPDTRFGMKLVDVST 367

Query: 197 LYLQAQQAGIR 207
            +  AQ   I+
Sbjct: 368 AFQGAQIEFIK 378



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 13/158 (8%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY- 252
           R  +    ++ G+ V  D +       +      P            +P       + + 
Sbjct: 477 RLQVAELLERYGVPVR-DPSVFHFLWVVDFPLFLPKEDDPERLESAHHPFTAPVPEDAHL 535

Query: 253 ---PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                     + ++L     E+      + +  +Q +  +  ++       E   +    
Sbjct: 536 LYTRPHMVRGQHYDLVLNGCEIGGGSIRIHNASQQLYILDTILK-------EDPSLLSHL 588

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L  L +  P   GIA+G DRLV ++ GA +I +VI  P
Sbjct: 589 LEALDSGAPPHGGIALGLDRLVSIIVGAPSIRDVIAFP 626


>gi|330997882|ref|ZP_08321716.1| aspartate--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329569486|gb|EGG51256.1| aspartate--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 586

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 13/185 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
                R  L  R+ +   +R Y     F+EI++  L          R F     +     
Sbjct: 132 RRACVRKNLELRHQMTMEVRRYLDSKGFLEIETPML--IGSTPEGARDFVVPSRMN--PG 187

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
           +   L  SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    E ++
Sbjct: 188 QFYALPQSPQTLKQLLMVAGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDVI 247

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
                + +           +              +  +EA   Y +    T         
Sbjct: 248 ALFEGMAKHLFRTIRGIELT---------EPFPRMPWSEAMRLYGSDKPDTRFGMEFVEL 298

Query: 194 RHLLY 198
             +L 
Sbjct: 299 MDVLK 303



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 48/169 (28%), Gaps = 7/169 (4%)

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           I  G       +    L      + G+R  +  +   +    + E  E    +       
Sbjct: 391 IMSGEDAMKTRKQLCELRLEMGTRLGLRDKNKFSLLWVVDFPMFEWSEEEGRLMAMHHPF 450

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P  E                +++    +E+      + DP  Q   F+          
Sbjct: 451 THPKDEDIPLLDSNPAAVRADAYDMVCNGVEVGGGSIRIHDPELQDKMFKIL-----GFT 505

Query: 300 NE-TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E         +       P   G+A G DR V L  G ++I + I  P
Sbjct: 506 EERAQEQFGFLMNAFKYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 554


>gi|296471913|gb|DAA14028.1| asparaginyl-tRNA synthetase 2, mitochondrial [Bos taurus]
          Length = 414

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 79/288 (27%), Gaps = 31/288 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H R R       L  R+   +++  +F ++ F+ I +  +  +       +  F  E   
Sbjct: 144 HLRCRTNVLGSVLRVRSEATAAIHSFFKDSGFVHIHTPVITSNDCEGAGEL--FQVEPSS 201

Query: 69  ------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                 ++    P++L  S +    ++++    ++F F   +R        H  EF M+E
Sbjct: 202 KIKVPEENFFNIPVFLTVSGQLHL-EVMSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVE 260

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +     Q +   M  +     +            C+ F  P      E   +     
Sbjct: 261 AEISFLESLQDLMQVMESLFKTTAMTVLSNCPKDVELCHKFLAPGQKDRLEHMLK----- 315

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                +N             +QA         W         + +  + G      +  Y
Sbjct: 316 -----NNFLIISYTEAVEILKQASQNFTFTPEWGADLHTEHEKYLVKHCGDIPV-FVINY 369

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
           P            D        +      L     EL     +  R+ 
Sbjct: 370 PLVLKPFYMRDNEDGPQHTVAAV----DLLVPGVGELFGGSLREERYH 413


>gi|332879234|ref|ZP_08446931.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332682654|gb|EGJ55554.1| aspartate--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 586

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 13/185 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
                R  L  R+ +   +R Y     F+EI++  L          R F     +     
Sbjct: 132 RRACVRKNLELRHQMTMEVRRYLDSKGFLEIETPML--IGSTPEGARDFVVPSRMN--PG 187

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
           +   L  SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    E ++
Sbjct: 188 QFYALPQSPQTLKQLLMVAGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDVI 247

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
                + +           +              +  +EA   Y +    T         
Sbjct: 248 ALFEGMAKHLFRTIRGIELT---------EPFPRMPWSEAMRLYGSDKPDTRFGMEFVEL 298

Query: 194 RHLLY 198
             +L 
Sbjct: 299 MDVLK 303



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 49/169 (28%), Gaps = 7/169 (4%)

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           I  G  +    +    L      + G+R  +  +   +    + E  E    +       
Sbjct: 391 IMSGEDVMKTRKQLCELRLEMGSRLGLRDKNKFSLLWVVDFPMFEWSEEEGRLMAMHHPF 450

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P  E                +++    +E+      + DP  Q   F+          
Sbjct: 451 THPKDEDIPLLDSNPAAVRADAYDMVCNGVEVGGGSIRIHDPELQDKMFKIL-----GFT 505

Query: 300 NE-TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E         +       P   G+A G DR V L  G ++I + I  P
Sbjct: 506 EERAQEQFGFLMNAFKYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 554


>gi|225376540|ref|ZP_03753761.1| hypothetical protein ROSEINA2194_02182 [Roseburia inulinivorans DSM
           16841]
 gi|225211639|gb|EEG93993.1| hypothetical protein ROSEINA2194_02182 [Roseburia inulinivorans DSM
           16841]
          Length = 608

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 58/167 (34%), Gaps = 19/167 (11%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           R LL   + +   +  ++  W  I    + E  E +  +  C      P       N   
Sbjct: 427 RKLLGAASDKHMKKDCYEFCW--IVDFPMYEIGEESGELEFCHNPFSMPQGGMDALNNQD 484

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDE 307
                  +++L    +EL +      DP      FE       +++ K            
Sbjct: 485 PLDILAYQYDLVCNGVELSSGAVRNHDPEIMIKAFELVGLGEDDVKAKF----PAMY--- 537

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                     P  +GIA G DR++ML+ G  +I E+I  P +++  +
Sbjct: 538 ---NAFCYGAPPHAGIAPGVDRMIMLICGEESIREIIPFPMNKNAMD 581



 Score = 91.6 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 62/181 (34%), Gaps = 16/181 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           ++ R+ I + LR+      F+EI +  L   SP     ++            + +     
Sbjct: 163 IVLRSKIVAELRQKMNSLNFMEITTPILTCSSPEGARDYLVPARNHPGKFYALPQ----- 217

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQLMKDCMN 138
            +P+   + L+A+G ++ F  A  +R+ +      P EF  L+   A  S E +      
Sbjct: 218 -APQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQLDMEMAFASQEDVFSVVEE 276

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++    E                 +    I   E+  +Y +      +D   Q    ++ 
Sbjct: 277 VLPPVFEKYG-------VYKTASKAPFVRIPYLESMDKYGSDKPDLRIDLVLQDATEVMA 329

Query: 199 L 199
            
Sbjct: 330 D 330


>gi|150866285|ref|XP_001385831.2| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149387541|gb|ABN67802.2| aspartyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
          Length = 668

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 85/271 (31%), Gaps = 24/271 (8%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSL-QYSPGNETHIR 60
           Q+P Q  + +      +  L  R+ +   +R  F   ++F EI++  L + +P      R
Sbjct: 145 QLPPQFRYLQLRTKFYQNALKTRSKVAMLIRNIFTENHEFTEIETPLLFKSTPEG---AR 201

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
            F       D       L  SP+   + L+++G  + F  A  +R+ +     QPEFT +
Sbjct: 202 EFLVPTRSPDKF---YALPQSPQQYKQILMSSGFTRYFQIAKCFRDEDLRADRQPEFTQV 258

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAE-------------VANQKIFSFQNVNCNPFSEPEY 167
           +   A+ +    +   +  +                      +   F +   N       
Sbjct: 259 DLEMAYVNNCDQVGVVVEDLIHNVWNRIRNISTYRVNEQGYLEAIDFDSTKPNSSLHFGK 318

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG--IRVAHDDTWSDIFSRILIEK 225
           +   +A  +Y  ID        +  +   L++ +        V         F     + 
Sbjct: 319 LKYIDALCKY-GIDKPDLRSKLEFVNLSELFIPSSTNNGQFPVLEACILKKAFEPSKGKY 377

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADP 256
             P   I+  +   R P            + 
Sbjct: 378 KLPRSLIDPLSYTRRKPIVIPIQDENDATNW 408



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           + ++L    +E+      + D   Q+  F+  +          +      L  L+   P 
Sbjct: 554 EHYDLVINGVEVGGGSRRIHDAELQKFVFKNILNITNYNDLFGH-----LLHALSMGCPP 608

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
            +G+A+GFDRL  ++ G+ +I +VI  P +QS  + +
Sbjct: 609 HAGLALGFDRLCAMLLGSASIRDVIAFPKNQSGFDPV 645


>gi|126460216|ref|YP_001056494.1| asparagine synthetase A [Pyrobaculum calidifontis JCM 11548]
 gi|126249937|gb|ABO09028.1| aspartate-ammonia ligase [Pyrobaculum calidifontis JCM 11548]
          Length = 369

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 100/351 (28%), Gaps = 50/351 (14%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
              W RD  Y  +     +  I   +RE+     F+E+ +  +   P  +  IR      
Sbjct: 53  SWRWARDEKY--QTVFKIQAGILRGIREFLDSRGFVEVLAPVIG--PVTDPGIR--GARQ 106

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ----GCLHQPEFTMLEW 122
              D       + +S     K+ +A+   KI+  +   R           H  EF  ++ 
Sbjct: 107 ASIDFYGVEYKVMSSAILY-KQYMASALGKIYFVSPNVRLEPVESIYTGRHLVEFYQVDI 165

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                +Y   M    +++   A+   ++ +           E +      A A    I  
Sbjct: 166 EMYKATYYDAMALAEDLVYHVAKYVREEYWRELEALGRELPEFKRPFKRYAHAEAVKI-- 223

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                      R  L  + ++             +FS +    +           +  YP
Sbjct: 224 -VNEYGCVNSPREELRWECEK-------------LFSALHTSPV----------FIYDYP 259

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR---HRFEKEMQEKKKIY 299
               +       DP        +   +       E +   E+     R  +  + K+   
Sbjct: 260 K--GSRGFYDREDPERPGVLRDFD--MLYPEGFGEAISGAEREYEPDRLIE--RIKEGGE 313

Query: 300 NETYPIDEDFLACLTEMPQ--SSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +        FL    E+    ++G  +G +R    + G   + E    P  
Sbjct: 314 DPAKY--GWFLQMAKELYPLQTAGFGIGVERFTRYICGLRAVWEARPFPKL 362


>gi|251771879|gb|EES52453.1| aspartyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 585

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 63/178 (35%), Gaps = 17/178 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R    L  R+ + + +R +   +QF EI++  L   +P      +     E      
Sbjct: 134 RSPRLLEALRFRSELTALIRNHMTSHQFWEIETPLLTRSTPEGARDFLVPSRLEKGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ F  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 194 LPQ------SPQLFKQLLMVGGLERYFQIARCFRDEDLRADRQPEFTQVDIEASFLTRDK 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            +     +     +    +  S              +T  EA  RY +       D P
Sbjct: 248 FLGIIEELFCDIFKKFRGETLS---------RPFMRLTYDEAMNRYGSDKPDLRYDLP 296



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 7/135 (5%)

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
            W   F  +     E             +P     L+     +   +  ++L     E+ 
Sbjct: 428 FWVVDFPLLEWNPDEKRYEAIHHPFTAPHPDDLGILSEA--PEKTRSLAYDLVLNGTEVG 485

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVM 331
                  +   QR  F+           E        L  L+   P   G+A+G DRL M
Sbjct: 486 GGSIRNHELELQRRIFD----LIGLSEEEATRRFGFLLEALSFGAPPHGGMAIGLDRLAM 541

Query: 332 LVTGANNINEVIWTP 346
           ++ G ++I EV+  P
Sbjct: 542 ILLGRDSIREVMAFP 556


>gi|111024079|ref|YP_707051.1| aspartyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123045357|sp|Q0S0P3|SYD_RHOSR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110823609|gb|ABG98893.1| aspartate--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 602

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 73/199 (36%), Gaps = 29/199 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            +  R+ + ++ R     ++F+E+++ +L   +P      R 
Sbjct: 118 EARLKYRYLDLRREGPGHAIRLRSKVNAAARAVLAHHEFVEVETPTLTRSTPEGA---RD 174

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     +Q       Y L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L
Sbjct: 175 FLVPARLQ---PGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQPEFTQL 231

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + + ++     ++    ++   +I +              +T AEA  RY   
Sbjct: 232 DIEMSFVNQDDVILLAEEVLSSLWKLVGHEIKT----------PIARMTYAEAMRRY-GS 280

Query: 181 DLGTTLDNPDQPDRHLLYL 199
           D        +  +    + 
Sbjct: 281 DKPDLRFGVELVECAEFFK 299



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 35/106 (33%), Gaps = 5/106 (4%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P PES               +++     E+      +     Q   F+         + E
Sbjct: 454 PKPESIDTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGIS----HEE 509

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   L       P   GIA G+DR+  L+ G ++I EVI  P
Sbjct: 510 AEEKFGFLLDAFAFGAPPHGGIAFGWDRITALLAGVDSIREVIAFP 555


>gi|332211191|ref|XP_003254703.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           isoform 2 [Nomascus leucogenys]
          Length = 250

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 72/262 (27%), Gaps = 23/262 (8%)

Query: 90  LAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           ++    ++F F   +R        H  EF M+E   +     Q +   +  +  A  +  
Sbjct: 1   MSGAFTQVFAFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEKLFKATTMMV 60

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                     C+ F  P      E   +          +N             +QA    
Sbjct: 61  LSKCPEDVELCHKFIAPGQKDRLEHMLK----------NNFLIISYTEAVEILKQASQNF 110

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
                W         + +  + G      +  YP            D        +    
Sbjct: 111 TFTPEWGADLQTEHEKYLVKHCGNIPV-FVINYPLALKPFYMRDNEDGPQHTVAAV---- 165

Query: 269 IELCNACDELLDPIEQRHR--FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMG 325
             L     EL     +  R  F +E   +  +      + + +L           G  MG
Sbjct: 166 DLLVPGVGELFGGGLREERYHFLEERLARSGLTE----VYQWYLDLRRFGSVPHGGFGMG 221

Query: 326 FDRLVMLVTGANNINEVIWTPF 347
           F+R +  + G +NI +VI  P 
Sbjct: 222 FERYLQCILGVDNIKDVIPFPR 243


>gi|229493472|ref|ZP_04387257.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229319433|gb|EEN85269.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 602

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 69/199 (34%), Gaps = 28/199 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   + R            +  R+ + ++ R     ++F+E+++ +L   +P      + 
Sbjct: 118 EARLKYRYLDLRREGPGSAIRLRSKVSAAARGVLAHHEFVEVETPTLTRSTPEGARDFLV 177

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
               +      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT L
Sbjct: 178 PSRLQPGSFYALPQ------SPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQPEFTQL 231

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   A  + + ++     I+    ++   +I +            + +T  EA  RY + 
Sbjct: 232 DIEMAFVNQDDIILLAEEILTALWKLVGHEIKT----------PIDRMTYTEAMRRYGSD 281

Query: 181 DLGTTLDNPDQPDRHLLYL 199
                 D            
Sbjct: 282 KPDLRFDIELVECMDFFKD 300



 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 35/119 (29%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +            P PE         D      +++     E+      +     Q   F
Sbjct: 441 HSAWTAVHHAFTSPKPEFFDTFDTDPDSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVF 500

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +           E        L       P   GIA G+DR+  L+ G ++I EVI  P
Sbjct: 501 KVMGIS----EEEAQEQFGFLLDAFAFGAPPHGGIAFGWDRITALLAGMDSIREVIAFP 555


>gi|226306467|ref|YP_002766427.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|259511868|sp|C0ZZA3|SYD_RHOE4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226185584|dbj|BAH33688.1| aspartyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 602

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 69/199 (34%), Gaps = 28/199 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   + R            +  R+ + ++ R     ++F+E+++ +L   +P      + 
Sbjct: 118 EARLKYRYLDLRREGPGSAIRLRSKVSAAARGVLAHHEFVEVETPTLTRSTPEGARDFLV 177

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
               +      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT L
Sbjct: 178 PSRLQPGSFYALPQ------SPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQPEFTQL 231

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   A  + + ++     I+    ++   +I +            + +T  EA  RY + 
Sbjct: 232 DIEMAFVNQDDIILLAEEILTALWKLVGHEIKT----------PIDRMTYTEAMRRYGSD 281

Query: 181 DLGTTLDNPDQPDRHLLYL 199
                 D            
Sbjct: 282 KPDLRFDIELVECMDFFKD 300



 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 35/119 (29%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +            P PE         D      +++     E+      +     Q   F
Sbjct: 441 HSAWTAVHHAFTSPKPEFFDTFDTDPDSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVF 500

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +           E        L       P   GIA G+DR+  L+ G ++I EVI  P
Sbjct: 501 KVMGIS----EEEAQEQFGFLLDAFAFGAPPHGGIAFGWDRITALLAGMDSIREVIAFP 555


>gi|195387357|ref|XP_002052362.1| GJ17510 [Drosophila virilis]
 gi|194148819|gb|EDW64517.1| GJ17510 [Drosophila virilis]
          Length = 1132

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 74/201 (36%), Gaps = 20/201 (9%)

Query: 13  DFHY-RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQ 69
           D  +   +  L  R+ +   +REY +    F+E+++ +L + +PG       F       
Sbjct: 539 DLRFNDMQHNLRLRSAVIMRMREYLINYLGFVEVETPTLFRRTPGGAQE---FVVPTRKA 595

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
            H      L  SP+   + L++ G ++ F  A  +R+       QPEFT L+   +  S 
Sbjct: 596 GHF---YSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSR 652

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + +M+     +R           S+        +    IT  EA  +Y   D   T    
Sbjct: 653 DDIMQLIEETLRY----------SWPKHLPKLQTPFRRITYEEALEKY-GTDKPDTRFGF 701

Query: 190 DQPDRHLLYLQAQQAGIRVAH 210
              +   +  +++    +   
Sbjct: 702 LLNNVSDIVEKSENFKGKYED 722



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 56/191 (29%), Gaps = 36/191 (18%)

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE----PNLGINCCTILDR 240
             +  ++ D     L     G +V   +    I        +E              +  
Sbjct: 780 ATEIIEKFDLEENDLLFLCIGPKVETRNLLGRIRLDYHEFLVENVKTKKTNDYRFLWVVD 839

Query: 241 YPAPESAL------------------------ANIYPADPRFTKRFELYACNIELCNACD 276
           +P  E                            +    +   ++ ++L     E+     
Sbjct: 840 FPLFERNTATNQLESVHHPFTAPLVEDLDKFATSCDNLETIRSEAYDLVLNGQEVGGGSM 899

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
            + D   Q+   E+ ++         +      L+ L    P   GIA+G DRL+ ++  
Sbjct: 900 RIHDRDMQQFILEQVLKI-------PHDHLSHLLSALESGCPPHGGIALGLDRLIAILCR 952

Query: 336 ANNINEVIWTP 346
           A +I +VI  P
Sbjct: 953 ARSIRDVIAFP 963


>gi|317124706|ref|YP_004098818.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315588794|gb|ADU48091.1| aspartyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 595

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 73/197 (37%), Gaps = 25/197 (12%)

Query: 11  NRDFHYR-RRP-------FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
            +  +   RRP        +  R+ + ++ R+   E  F+EI++ +L   +P      R 
Sbjct: 124 LKHRYLDLRRPGASSAGSAIRLRSKVNAAARKVLGERDFVEIETPTLTRSTPEG---ARD 180

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+
Sbjct: 181 FLVPARL--APGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLD 238

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +      +++    ++R   ++             +       +T A+A ARY   D
Sbjct: 239 IEMSFVEQSDVLELGEAVVREIWKLIG----------VDLEPPFLQMTYAQAMARY-GSD 287

Query: 182 LGTTLDNPDQPDRHLLY 198
                   +  D    +
Sbjct: 288 KPDLRFGQELVDCTEYF 304



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 32/119 (26%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           + G          P  E                +++     E+      +     Q   F
Sbjct: 447 HSGWTAVHHAFTSPKKEFEDTFDSDPGSALAYAYDMVCNGNEIGGGSIRIHRRDVQERVF 506

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                       E        L       P   GIA G+DR+V L+    +I +VI  P
Sbjct: 507 GVMGI----GAEEAQEKFGFLLDAFQYGAPPHGGIAFGWDRIVSLLARTESIRDVIAFP 561


>gi|297621745|ref|YP_003709882.1| Aspartyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297377046|gb|ADI38876.1| Aspartyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 592

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 69/194 (35%), Gaps = 9/194 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R+ +  ++R      +FIEI +  L + +P     ++            
Sbjct: 138 RRGKIKDHLVLRHKVMQTVRNVLNCQEFIEISTPILGKSTPEGARDYLVPSRIHPGTFYA 197

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 198 LPQ------SPQLFKQLLMVAGMDRYFQIAPCFRDEDLRADRQPEFTQIDIEMSFGTPED 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L+     +++   +                    +         R+  ++L T  D   +
Sbjct: 252 LLNIIEEMVKKIFKDCLGLEIKIPFRRLPYKDCMDRFGTDRPDTRF-GMELSTINDIAKR 310

Query: 192 PDRHLLYLQAQQAG 205
            +  +   Q    G
Sbjct: 311 SEFSVFKNQLDNGG 324



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 52/160 (32%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL    AQ   +       +  +    L  K      +         P  E         
Sbjct: 411 HLRRKIAQDRKLAADDHLDFLWVTDFPLFGKDAETGRLESLHHPFTSPHVEDMHLLDSDP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
               +  ++L     E+      + D   Q+  F+      +    E       FL  L 
Sbjct: 471 LHVRSYGYDLVLNGYEIGGGSQRIHDQSLQKKIFD----LLQITPEEQNEKFGFFLEALK 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA+G DRL+ML+   +NI EVI  P +Q   +
Sbjct: 527 YGTPPHLGIALGLDRLIMLMAQTDNIREVIAFPKTQKASD 566


>gi|325846752|ref|ZP_08169667.1| aspartate--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481510|gb|EGC84551.1| aspartate--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 585

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 63/180 (35%), Gaps = 18/180 (10%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ I   +REY  +N+F E+++  L   +P     ++            + +     
Sbjct: 141 LKLRSDIVRCMREYMYDNKFTEVETPFLTKPTPEGARDYLVPSRVNQGKFYALPQ----- 195

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+    ++ F     +R+ +     QPEFT L+   +            ++
Sbjct: 196 -SPQLMKQLLMIGSLDRYFQIVKCFRDEDLRANRQPEFTQLDIELSFAD-------QDDV 247

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I+    +  +   +F + +         +  +EA   Y   D           D   ++ 
Sbjct: 248 IKVNEGLLKKLFDTFTDYDLQ--LPIPRMDYSEAMNSY-GSDKPDLRYGYKINDISEIFK 304



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 14/161 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +    +  +  + +  + E  E              P  E     +   
Sbjct: 408 ALRRKVAKDQNL-YEKEYAFCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDVDLLLTEP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +   T+ +++     E+      + +   Q   F+     +   K+K           F+
Sbjct: 467 EKVRTQAYDIVINGDEMGGGSVRINNQELQEKVFKALKLSDEDIKQKFG--------FFI 518

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             L    P  +G+A G DR+VML    +NI ++I  P +QS
Sbjct: 519 EALQYGTPPHAGLAYGLDRMVMLFAKTDNIKDIIAFPKTQS 559


>gi|312870603|ref|ZP_07730717.1| aspartate--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311093878|gb|EFQ52208.1| aspartate--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 595

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   L  R+ + S +  Y+    F+++++  L   +P     +I            
Sbjct: 134 RRPEMMKNLKLRSKVASIVHNYYDGEGFLDVETPDLTRSTPEGARDYIVPSRVYPGHFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+AAG +K +  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 194 LPQ------SPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQPEFTQIDTEMSFATPED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I+   +              +  +    +   EA  +Y   D   T      
Sbjct: 248 IQTVTEGLIKRVMKEVKG---------IDVKTPFSRMEWQEAMDKY-GSDKPDTRFGMLI 297

Query: 192 PD 193
            D
Sbjct: 298 HD 299



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 52/154 (33%), Gaps = 7/154 (4%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L    A++  +       +  + +  + E  E                 E         D
Sbjct: 408 LRRAIAEELDMIKPGQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGED 467

Query: 256 PR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
           P     + +++     E+      + DP  Q    +     K++   E        L  L
Sbjct: 468 PHKAHAQSYDIILNGQEIGGGSIRIHDPKVQEKVLKALGYTKERA--EARF--GFLLKAL 523

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           T  MP   G+A G DR VML+  A+NI +VI  P
Sbjct: 524 TMGMPPEGGLAFGLDRWVMLLAEADNIRDVIPFP 557


>gi|189347020|ref|YP_001943549.1| aspartyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|238692154|sp|B3EDE5|SYD_CHLL2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189341167|gb|ACD90570.1| aspartyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 605

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 15/172 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ + + +R Y  E +FIEI +  L   SP      R F     +    
Sbjct: 146 RREKIHENIIFRSRLTAMVRRYLEEREFIEIQTPILTSSSPEG---ARDFLVPSRLH--P 200

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G  + F  A  +R+ +      P EF  ++   A      
Sbjct: 201 GKFYALPQAPQQFKQLLMVSGFPRYFQIAPCFRDEDARADRSPGEFYQIDMEMAFIEQND 260

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           L +    + +   E  +QK  +              I+  E   R+ +    
Sbjct: 261 LFEILEGMFKHLTENMSQKRITQ--------FPFPRISYREVMNRFGSDKPD 304



 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 54/150 (36%), Gaps = 13/150 (8%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPADPRFTKRFELYAC 267
             + ++  I    + E  E    I+        P     AL  + P D     ++++   
Sbjct: 434 KDELSFCWIVDFPMYEYNEEAKKIDFSHNPFSMPQGEMEALETMQPLDI-LAYQYDIVCN 492

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIA 323
            IEL +       P      FE     K+        +D  F   +       P   GIA
Sbjct: 493 GIELSSGAIRNHRPDIMYRAFEIAGYTKE-------EVDSRFGHMIDAFKLGAPPHGGIA 545

Query: 324 MGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            G DR+VM++    NI EVI  P +Q  Q+
Sbjct: 546 PGLDRMVMILRDEQNIREVIAFPMNQQAQD 575


>gi|163753589|ref|ZP_02160712.1| aspartate--tRNA ligase [Kordia algicida OT-1]
 gi|161325803|gb|EDP97129.1| aspartate--tRNA ligase [Kordia algicida OT-1]
          Length = 584

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 74/220 (33%), Gaps = 12/220 (5%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +   +R+Y    +FIE+++  L   +P      R F     + +  
Sbjct: 133 RRNPVKDSLIFRHKVTMEVRKYLSSQEFIEVETPYLIKSTPEG---ARDFVVPSRMNE-- 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDI 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + R   +    K           +         +       ++ G   +     
Sbjct: 248 LNVFEGLTRHLLKEI--KGIEIDKFPRMTYDHAMKTYGNDKPDIRFGMEFGELNEVAQHK 305

Query: 193 DRHLLYLQAQQAGIRVAHDD-TWSDIFSRILIEKIEPNLG 231
           D  +        GI V            +++     P +G
Sbjct: 306 DFKVFNSAELVVGIAVPGGASYTRKEIDKLIDWVKRPQVG 345



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 46/157 (29%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +R   +     +    L+E  E     +        P P          
Sbjct: 404 ALRMELAERLNLRNPEEFAPLWVMDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTNP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
                  ++L     E+      + D   Q   F+     E + K +            +
Sbjct: 464 GDVKANAYDLVLNGNEIGGGSIRIHDKEIQAIMFKHLGFTEEEAKAQFG--------FLM 515

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   G+A G DRLV ++ G   I + I  P
Sbjct: 516 DAFQYGAPPHGGLAFGLDRLVAILGGQETIRDFIAFP 552


>gi|257055552|ref|YP_003133384.1| aspartyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256585424|gb|ACU96557.1| aspartyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 590

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 67/177 (37%), Gaps = 26/177 (14%)

Query: 13  DFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R+ +    RE    + FIE+++ ++   +P      R 
Sbjct: 120 ETRLRYRYLDLRREGPARIMRLRSEVNRVAREVLHRHGFIEVETPTMTRSTPEG---ARD 176

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+
Sbjct: 177 FLVPARL--KPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDEDFRADRQPEFTQLD 234

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
              +    + +M    +++    ++A  ++ +              ++ AEA ++Y 
Sbjct: 235 IEMSFVEQDDVMALAEDVLSALWKLAGVEVST----------PFRRMSYAEAMSKYG 281



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 71/228 (31%), Gaps = 17/228 (7%)

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                     +  A V   +  +         SE E   + EA       D         
Sbjct: 332 WQEWARQRGHKGLAYVLVGEDGTLGGPVAKNLSEHERANLVEAAGAKPG-DCIFFAAGKP 390

Query: 191 QPDRHLL----YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR-----Y 241
           +  R LL       A + G+   +  ++  +    + E  + +  +N            +
Sbjct: 391 KDARQLLGMARVEIAHRLGMIDENAWSFVWVVDFPMFEAADESDDVNVGGGKWTALHHAF 450

Query: 242 PAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            +P     + +  DP     + +++     E+      +     Q+  FE          
Sbjct: 451 TSPAPEWIDKFEQDPGNALAQAYDIVCNGHEIGGGSIRIHRADVQKRVFEVMGLS----E 506

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L       P   G+A G+DR+VML+ GA ++ EVI  P
Sbjct: 507 EEAQDKFGFLLDAFQYGPPPHGGVAFGWDRIVMLLAGAESLREVIAFP 554


>gi|266625685|ref|ZP_06118620.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288862408|gb|EFC94706.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 307

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 55/162 (33%), Gaps = 17/162 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           +L    A+Q  +    D  +  +    L+E  E              P  E         
Sbjct: 126 NLRLELARQQDLLKKDDFKFLWVTEFPLLEYSEEQGRFVAMHHPFTMPMDEDWHLIDSDP 185

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                K +++     E+      +     Q   FE      ++ QE+             
Sbjct: 186 GAVRAKAYDIVLNGTEMGGGSVRIHQGDIQSKMFEVLGFTPEQAQEQFG----------F 235

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            L      +P  +G+A G DR++ML+ GA++I +VI  P  +
Sbjct: 236 LLDAFKYGVPPHAGLAYGLDRMIMLMVGADSIRDVIAFPKVK 277


>gi|312797300|ref|YP_004030222.1| aspartyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312169075|emb|CBW76078.1| Aspartyl-tRNA synthetase (EC 6.1.1.12) [Burkholderia rhizoxinica
           HKI 454]
          Length = 626

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 68/184 (36%), Gaps = 19/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++        +   
Sbjct: 159 RRPQMQHNLRLRYRVAMESRKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNAGMFFA 218

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +  + ++
Sbjct: 219 LPQ------SPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEQE 272

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +IR   +           ++         +  AEA  R+ +   DL   L+  
Sbjct: 273 IRDLFEAMIRHVFKTT---------IDVELADPFPVMQHAEAMRRFGSDKPDLRVKLEFT 323

Query: 190 DQPD 193
           +  D
Sbjct: 324 ELTD 327



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 42/140 (30%), Gaps = 5/140 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           V        +    + E  + +            P  E              K +++   
Sbjct: 455 VEQGWKPLWVIDFPMFEYDDEDNRWVAAHHPFTSPKDEHLEYLEVDPGRCLAKAYDMVLN 514

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +     Q   F    +  K    E        L  L    P   GIA G 
Sbjct: 515 GWEIGGGSVRIHREDVQSKVF----RALKIGPEEARAKFGFLLDALQYGAPPHGGIAFGL 570

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DR+V ++ GA++I +VI  P
Sbjct: 571 DRIVTMMAGADSIRDVIAFP 590


>gi|223954271|gb|ACN30266.1| putative asparaginyl tRNA synthetase [Epichloe festucae]
          Length = 276

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 82/306 (26%), Gaps = 47/306 (15%)

Query: 50  QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
               G  T        L   D+     +L  S +   +  L +    ++C   ++R  + 
Sbjct: 3   SQVEGGAT--------LFKFDYYGADAFLTQSSQLYLETCLPS-MGSVYCIEKSFRAEKS 53

Query: 110 -GCLHQPEFTMLEWYRAHE------SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
               H  EFT +E             + + +   +  +  A       + +       P 
Sbjct: 54  LTRRHLSEFTHVEAELDFIEFSHLLDHVEFLICRVIELTMADPAIAGYVKTLNPEFTMPE 113

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
                +   +A     + D+     NP      +     ++                   
Sbjct: 114 RPFMRMKYTDAIQWLIDHDIPNEEGNPHNFGDDIAEAAERRM------------------ 155

Query: 223 IEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
                    +N    L  +PA   +      P D R T+  +     +         +D 
Sbjct: 156 ------TDIMNKPIFLTHFPAHIKAFYMKKDPEDNRVTESVDCLMPGVGEIVGGSMRIDD 209

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINE 341
            ++         +++ +  E Y     F           G  +G +RL+  +   + + +
Sbjct: 210 YDEL----LAACKREGLDPEAYC--WYFDQRKYGSSPHGGYGIGLERLLAWLCKQHTVRD 263

Query: 342 VIWTPF 347
               P 
Sbjct: 264 CCLYPR 269


>gi|18313428|ref|NP_560095.1| asparagine synthetase A [Pyrobaculum aerophilum str. IM2]
 gi|18160962|gb|AAL64277.1| asparaginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 348

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 107/349 (30%), Gaps = 47/349 (13%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W    + + +     +  I  +LRE+     F+E+ S  +   P  +  IR    + 
Sbjct: 29  KYSWRWAVNEKYKLVFKVQASILRALREFLDSKGFVEVLSPIIG--PVTDPGIR--GAKQ 84

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC----LHQPEFTMLEW 122
              D       + +S     K+ +A    KI+  +   R           H  EF  L+ 
Sbjct: 85  ASIDFYGAEYKVMSSAILY-KQYMARVLGKIYFVSPNIRLEPPDSIFTGRHLVEFYQLDL 143

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                +Y + M    ++I    +                          +   +     L
Sbjct: 144 EMYKATYHEAMDLAEDLITYVVKYV-----------------------KDVHGKELEAVL 180

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
           G  L    +P +   + +A +   ++  +++  +       + +  +   +    +  YP
Sbjct: 181 GRQLYEFKRPFKRYSHKEAVEFVNKLGCENSPREELRWECEKVMSAHH--DSPFFVYDYP 238

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR---HRFEKEMQEKKKIY 299
               +       DP        +   +       E +   E+     R  +  + ++   
Sbjct: 239 R--GSRGFYDREDPERPGVLRDFD--MLYPEGFGEAISGAEREFEPERLVE--RIREGGE 292

Query: 300 NETYPIDEDFLACLTEMPQ--SSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +      + FL    E+    ++G  +G +RL   + G   + E    P
Sbjct: 293 DPAKY--QWFLQMAKELYPLQTAGFGIGVERLTRYICGLRAVWEARPYP 339


>gi|51473344|ref|YP_067101.1| aspartyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|62287549|sp|Q68XM3|SYD_RICTY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|51459656|gb|AAU03619.1| Aspartic acid translase [Rickettsia typhi str. Wilmington]
          Length = 605

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 57/180 (31%), Gaps = 17/180 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ + S +R   +   F E  +  L   SP      R F   
Sbjct: 128 KHRFLDLRREKLHNNIILRSQVISHIRHLMIVRGFTEFQTPILTSSSPEG---ARDFLVP 184

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             I        Y L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L+  
Sbjct: 185 SRIH---PGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDLE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  +           I    E     +F+              I   E+  +Y +    
Sbjct: 242 MSFVT--------QEDIFNTIEPVLYDLFTKFTDKIVSKPPFVRIPYNESMLKYGSDKPD 293



 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 50/167 (29%), Gaps = 15/167 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA----PESALAN 250
            +     ++  +       +  I      E  E    I+        P            
Sbjct: 411 KVRIKLGEELNLLEKDCFKFCWITDFPFYEFNEETGKIDFSHNPFSMPQGGIDALEQAKT 470

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF- 309
                     ++++    IEL +       P      F          Y     +D+ F 
Sbjct: 471 TEELLALTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSI------AGY-SAEEVDKRFG 523

Query: 310 --LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             +       P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 524 AMIRAFKFGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 570


>gi|145224367|ref|YP_001135045.1| aspartyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|189082105|sp|A4TBU4|SYD_MYCGI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145216853|gb|ABP46257.1| aspartyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 590

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 22/172 (12%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR      +  R+ + ++ R     + F+EI++ +L   +P      R F     +Q   
Sbjct: 129 RREVPGNAIRLRSKVNAAARGVLAGHDFVEIETPTLTRSTPEG---ARDFLVPARLQ--- 182

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    + 
Sbjct: 183 PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDADD 242

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +M     ++R                  +       I+ A+A  R+ +    
Sbjct: 243 VMALSEEVLRAVWATIG----------YDLPLPLPRISYADAMRRFGSDKPD 284



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 15/121 (12%)

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF--- 288
                     P PES            +  +++     E+      +     Q   F   
Sbjct: 444 WTAMHHAFTAPTPESEATFDTDPGSALSNAYDIVCNGNEIGGGSLRIHRRDVQERVFAMM 503

Query: 289 ---EKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
              ++E ++K     E +             P   GIA G+DR+V L+ G ++I EVI  
Sbjct: 504 GISQEEAEDKFGFLLEAFTF---------GAPPHGGIAFGWDRIVALLAGLDSIREVIAF 554

Query: 346 P 346
           P
Sbjct: 555 P 555


>gi|288958468|ref|YP_003448809.1| aspartyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288910776|dbj|BAI72265.1| aspartyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 608

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 60/173 (34%), Gaps = 11/173 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R    ++ R+ + +S R   ++  F E  +  L   SP     ++            
Sbjct: 134 RRERIHENIMLRSRVIASARRRMIDQGFTEFQTPILTASSPEGARDYLVPSRNHPGKFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ AG ++ F  A  +R+ +      P EF  L++  +  + E
Sbjct: 194 LPQ------APQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFEMSFVTQE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +      ++    +      F   +           I+ AE+  +Y N    
Sbjct: 248 DVFAAIEPVLHGIFDEFGG--FRRDSKPAIDGLPFRRISYAESMLKYGNDKPD 298



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 50/158 (31%), Gaps = 15/158 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +   +   +  I    + E  E    +         P                  +
Sbjct: 424 EELDLIEKNAFRFCWIVDFPMYELDEETNKVIFSHNPFSMPQGGLKALETMNPLDIKAYQ 483

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTE 315
           +++    +EL +       P      FE      +E++ +       + +          
Sbjct: 484 YDIVCNGVELSSGAIRNHLPEVMYKAFEIAGYPPEELEARFGGMLSAFKL---------G 534

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 535 APPHGGSAPGIDRIVMLLADEPNIREVIAFPLNQRAED 572


>gi|34540016|ref|NP_904495.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|46577172|sp|Q7MXM0|SYD_PORGI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|34396327|gb|AAQ65394.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 587

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 64/187 (34%), Gaps = 18/187 (9%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  +  R+ +   +R+Y     F+E+++  L   +P      R F     +   
Sbjct: 132 LRRHCVRSNMELRHRMALEVRKYLDGEGFLEVETPMLIKSTPEG---ARDFVVPSRMN-- 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 187 PGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +           S              +T  +A   Y +    T  D    
Sbjct: 247 VLSTFEGMAKHLFRTIRHVEIS---------EAFPRMTWHDAMKYYGSDKPDTRFDMRFV 297

Query: 192 PDRHLLY 198
               +L 
Sbjct: 298 ELMDVLK 304



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 54/188 (28%), Gaps = 5/188 (2%)

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+         I  G  L    +    L      Q G+R  +  +   +    L E  
Sbjct: 378 RRTMEAEPGDLILILSGDDLMKTRKQLCELRLEVGSQLGLRDKNKFSCLWVVDFPLFEWD 437

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E              P PE                +++    +E+      + D   Q+ 
Sbjct: 438 EETKRFYAMHHPFTSPKPEDIPLLDTDPGAVRANAYDMVINGVEVGGGSIRIHDSALQQK 497

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FE           +        +       P   G+A G DR V L  G ++I + I  
Sbjct: 498 MFE----LLGFTPEKAQEQFGFLMNAFKYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAF 553

Query: 346 PFSQSNQE 353
           P + + ++
Sbjct: 554 PKNNAGRD 561


>gi|260437931|ref|ZP_05791747.1| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809682|gb|EFF68887.1| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 587

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 19/167 (11%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           R LL   +++   +  ++  W  I    + E  E +  +  C      P           
Sbjct: 406 RRLLGAASEKHMKQNTYEFCW--IVDFPMYEIGEESGELEFCHNPFSMPQGGMDALKNKE 463

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDE 307
                  +++L    +EL +      DP      F      E +++ K            
Sbjct: 464 PLDILAYQYDLVCNGVELSSGAVRNHDPEIMIEAFRLVGLGEDDVKAKF----PAMY--- 516

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                     P  +GIA G DR++ML+ G  +I E+I  P +++  +
Sbjct: 517 ---NAFCYGAPPHAGIAPGVDRMIMLICGEESIREIIPFPMNKNAMD 560



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 16/179 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           ++ R+ I + LR       F+EI +  L   SP     ++            + +     
Sbjct: 142 IILRSKIVAELRNKMNSLGFMEITTPILTCSSPEGARDYLVPARNHPGKFYALPQ----- 196

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQLMKDCMN 138
            +P+   + L+A+G ++ F  A  +R+ +      P EF  L+   A  S E +      
Sbjct: 197 -APQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQLDMEMAFASQEDVFSVIEE 255

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           ++                 +    +    I   E+  +Y        +D        LL
Sbjct: 256 VLPPVFAKYG-------VYSNASKAPFVRIPYLESMDKYGTDKPDLRIDLVLTDATELL 307


>gi|26553741|ref|NP_757675.1| aspartyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|38372528|sp|Q8EWB7|SYD_MYCPE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|26453748|dbj|BAC44079.1| aspartyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 580

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 19/180 (10%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D            R      +++  I++  +  +  +    L E  E             
Sbjct: 390 DKYEITQQALGAIRKEFVNISKK--IKMNEEFAFLWVVDWPLFEYSEEEKRYVSAHHPFT 447

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQE 294
            P  E+               ++L     E+      + +   Q   F+       +++E
Sbjct: 448 MPTAETLDTFDKDPANAKAIAYDLVLNGFEIGGGSLRIYNSELQTRMFKFLGLNDSQVKE 507

Query: 295 KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           K              +      +P   GIA G +R++M++   N+I +VI  P + S  +
Sbjct: 508 KFGFI----------INAFKYGVPPHGGIAFGIERILMIMLNTNSIRDVIAFPKNSSGVD 557



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 80/235 (34%), Gaps = 33/235 (14%)

Query: 10  WNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETH 58
              D   +      RRP +    + R  I +  R + V+N F EI++  L   +P     
Sbjct: 118 GLEDLRLKYRYLDLRRPVMQNNIINRGKIINLFRSFLVKNNFNEIETPYLSKQTPEGAR- 176

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
                 + ++    +K   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 177 ------DYLVPTRSKKFFALPQSPQIYKQLLMVSGMDRYFQIARCFRDEDLRADRQPEFT 230

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  S  ++      +               +  N    +    ++ ++A   Y 
Sbjct: 231 QIDIETSFLSDLEIQSIVQEMFIYVF---------KEFFNIKLKTPFTRMSYSDAI-EYY 280

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
             D           +   L    +    ++      S   +RI    +E N+   
Sbjct: 281 GSDKPDIRFENKIMN---LTNYFKDTNFKIFKSIYESK--NRISAVFVEDNIVKQ 330


>gi|296170800|ref|ZP_06852371.1| aspartate--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894536|gb|EFG74274.1| aspartate--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 587

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 71/212 (33%), Gaps = 32/212 (15%)

Query: 3   QIP---SQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P    +P    +   + R            L  R+ + ++ R     + F+EI++ ++
Sbjct: 106 PLPFQLDEPAG-EELRLKYRYLDLRRDGPAAALRLRSDVNAAARAVLARHDFVEIETPTI 164

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              +P      R F     +        Y L  SP+   + L+ AG E+ +  A  +R+ 
Sbjct: 165 TRSTPEGA---RDFLVPARLH---PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDE 218

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT L+   +    E ++     I+     +   ++ +              
Sbjct: 219 DFRADRQPEFTQLDMEMSFVDAEDIIAISEEILTALWALIGYRLPT----------PIPR 268

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           IT A+A  R+ +                    
Sbjct: 269 ITYADAMRRFGSDKPDMRFGLELVECTEFFKD 300



 Score = 78.5 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 239 DRYPAPESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
             + +P+    ++   DP       +++     E+      +     Q   F     ++ 
Sbjct: 449 HAFTSPKPEFEDVVDTDPGRVLADAYDIVCNGNEIGGGSIRIHRRDIQERVFAVMGLDRA 508

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L   T   P   GIA G+DR+  L++  ++I EVI  P
Sbjct: 509 ----EAEEKFGFLLEAFTFGAPPHGGIAFGWDRINALLSRVDSIREVIAFP 555


>gi|289434799|ref|YP_003464671.1| hypothetical protein lse_1434 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171043|emb|CBH27585.1| aspS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 591

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 60/188 (31%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQTITEDMLIDVVKEA---------KNITIQKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299

Query: 192 PDRHLLYL 199
               ++  
Sbjct: 300 NVSEVVKD 307



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 47/154 (30%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +    +  +  +    L E  E              P  E        +
Sbjct: 409 ALRNKLGKELALINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                + +++     E+      +     Q   F           +E       FL   L
Sbjct: 469 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRAL-----GFTDEAASEQFGFLMEAL 523

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 524 EYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|167835473|ref|ZP_02462356.1| aspartyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 600

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 42/140 (30%), Gaps = 5/140 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           V        +    + E  + +            P  E              K +++   
Sbjct: 429 VEAGWKPLWVVDFPMFEYDDEDARYVAAHHPFTSPKDEHLEYLETDPGRCLAKAYDMVLN 488

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
             E+      +     Q   F    +  K    E        L  L    P   GIA G 
Sbjct: 489 GWEIGGGSVRIHREEVQSKVF----RALKIGPEEAQAKFGFLLDALQYGAPPHGGIAFGL 544

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DR+V ++ GA++I +VI  P
Sbjct: 545 DRIVTMMAGADSIRDVIAFP 564



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 64/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L  R  +    R+Y  E  FI+I++  L   +P     ++            
Sbjct: 133 RRPQMQHNLRLRYRVAIEARKYLDEQGFIDIETPMLTKSTPEGARDYLVPSRVNA----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ A  ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 188 -GQFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLGEQE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     ++IR   +       +                  +   R   ++     D    
Sbjct: 247 IRDLFEDMIRHIFKTTIGVELAATFPVMPHSEAMARFGSDKPDLRVK-LEFTELTDAMKD 305

Query: 192 PDRHLLYLQAQQAGIRVA 209
            D  +    A     RVA
Sbjct: 306 VDFKVFSTPANTKDGRVA 323


>gi|171687685|ref|XP_001908783.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943804|emb|CAP69456.1| unnamed protein product [Podospora anserina S mat+]
          Length = 167

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 7/98 (7%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEM 316
               ++L    +EL      +     Q + F + ++   K   +        L  L    
Sbjct: 45  RADHYDLVLNGVELGGGSRRIHTAKMQEYVFREILKMSDKGVKQ----FSHLLEALRAGC 100

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
           P  +G A+GFDRL  ++TG +++ +VI  P  +S + E
Sbjct: 101 PPHAGFALGFDRLCAVLTGTDSVRDVIAFP--KSMKGE 136


>gi|154496108|ref|ZP_02034804.1| hypothetical protein BACCAP_00392 [Bacteroides capillosus ATCC
           29799]
 gi|150274663|gb|EDN01727.1| hypothetical protein BACCAP_00392 [Bacteroides capillosus ATCC
           29799]
          Length = 582

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 66/200 (33%), Gaps = 26/200 (13%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           +     + R            ++ R  + S+LR+    + F+EI +  L   SP     +
Sbjct: 108 DESARLKYRYLDLRNPEVKNNIVLRCQVVSALRQAMTAHGFMEITTPILTASSPEGARDY 167

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EF 117
           +            + +      +P+   + L+A+G +K F  A  +R+ +      P EF
Sbjct: 168 LVPSRKHPGKFYALPQ------APQQFKQLLMASGFDKYFQIAPCFRDEDARGDRSPGEF 221

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
             L+   A    E +     +++        +        +    +  + I   EA   Y
Sbjct: 222 YQLDMEMAFADQEDVFTVLEDVLPPIFAKYGK-------YDTASSAPFKRIPYLEAMETY 274

Query: 178 ANIDLGTTLDNPDQPDRHLL 197
            +      +D   Q     L
Sbjct: 275 GSDKPDLRIDLTAQDATEAL 294



 Score = 92.4 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 59/171 (34%), Gaps = 24/171 (14%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP---APESALANI 251
            +L         +  ++  W  I    + E  E +  +  C      P         A  
Sbjct: 394 KMLAPLCPDHFHKETYEFCW--IVDFPMYEIGEESGELEFCHNPFSMPNGGLEVLKKAAA 451

Query: 252 YPADPR--FTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETY 303
              DP      +++L    +EL +      DP      F      E +++ K        
Sbjct: 452 GEVDPLSITAFQYDLVCNGVELSSGAVRNHDPEIMIEAFQLVRLGEDDVKSKF----PAM 507

Query: 304 PIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                         P  +GIA G DR+VML+ G ++I E+I  P +++ Q+
Sbjct: 508 Y------NAFTYGAPPHAGIAPGVDRMVMLLAGEDSIREIIPFPMNKNAQD 552


>gi|212696219|ref|ZP_03304347.1| hypothetical protein ANHYDRO_00755 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676848|gb|EEB36455.1| hypothetical protein ANHYDRO_00755 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 585

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 14/161 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A+   +    +  +  + +  + E  E              P  E     +   
Sbjct: 408 ALRRKVAKDQNL-YEKEYAFCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDVDLLLTEP 466

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           +   T+ +++     E+      + +   Q   F+     +   K+K           F+
Sbjct: 467 EKVRTQAYDIVINGDEMGGGSVRINNQELQEKVFKALKLSDEDIKQKFG--------FFI 518

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
             L    P  +G+A G DR+VML    +NI ++I  P +QS
Sbjct: 519 EALQYGTPPHAGLAYGLDRMVMLFAKTDNIKDIIAFPKTQS 559



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 63/180 (35%), Gaps = 18/180 (10%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ I   +REY  +N+F E+++  L   +P     ++            + +     
Sbjct: 141 LKLRSDIVRCMREYMYDNKFTEVETPFLTKPTPEGARDYLVPSRVNQGRFYALPQ----- 195

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+    ++ F     +R+ +     QPEFT L+   +            ++
Sbjct: 196 -SPQLMKQLLMIGSLDRYFQIVKCFRDEDLRANRQPEFTQLDIELSFAD-------QDDV 247

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I+    +  +   +F + +         +  +EA   Y   D           D   ++ 
Sbjct: 248 IKVNEGLLKKLFDTFTDYDLQ--LPIPRMDYSEAMNSY-GSDKPDLRYGYKINDISEIFK 304


>gi|302866788|ref|YP_003835425.1| aspartyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302569647|gb|ADL45849.1| aspartyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 601

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 6/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                 A++A +       +  +    + E+ +               A         P 
Sbjct: 403 AARIEIAKRANLIDESAWAFCWVVDAPMFERTDEGGWTAVHHPFTSPNAEWVDRFEEAP- 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           D      +++     E+      +     Q+  F+          +E        L    
Sbjct: 462 DRALAYAYDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITA----DEAQDKFGFLLEAFK 517

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              P   GIA G+DR+ ML+ GA++I EVI  P ++
Sbjct: 518 YGAPPHGGIAFGWDRVCMLLAGADSIREVIAFPKTR 553



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 64/192 (33%), Gaps = 26/192 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   + R            +  R+      R    E  F+EI++ +L   +P      R 
Sbjct: 116 DIRLKYRYLDLRRGGPAKAMRLRSRANQIARGVLHERDFLEIETPTLTRSTPEGA---RD 172

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F   + +Q        L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+
Sbjct: 173 FLVPVRLQ--PGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQPEFTQLD 230

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  + + ++     I+    +                      IT  +A +RY   D
Sbjct: 231 IEMSFVTEDDVIDLGEAIVSALWKDLAGYEI---------ARPIPRITWHDAMSRY-GSD 280

Query: 182 LGTTLDNPDQPD 193
                   +  +
Sbjct: 281 KPDLRYGVELTE 292


>gi|291009610|ref|ZP_06567583.1| aspartyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 605

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 69/212 (32%), Gaps = 30/212 (14%)

Query: 3   QIP---SQPWWN-RDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
            +P    +      +   R R            +  R+ +    R+      F+E+++ +
Sbjct: 105 PLPFPLDEHLEVGEETRLRHRYLDLRRNGPAKAMRMRSEVNRIARDVLHGRDFVEVETPT 164

Query: 49  LQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +   +P      R F     +Q        L  SP+   + L+  G E+ F  A  +R+ 
Sbjct: 165 MTRSTPEGA---RDFLIPARLQ--PGNWYALPQSPQLFKQLLMVGGLERYFQIARCYRDE 219

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT L+   +    + +++    II                         + 
Sbjct: 220 DFRADRQPEFTQLDIEMSFVDQDDVIELGEEIISALWRETAGHEIP---------RPIQR 270

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +T A+A AR+   D        +  +    + 
Sbjct: 271 MTYADAMARF-GTDKPDLRFGLELTEMTEYFA 301



 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 19/121 (15%)

Query: 236 TILDRYP--APESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE-- 289
                +P  +P +   + + +DP       +++     E+      +     Q+  FE  
Sbjct: 443 WTAVHHPFTSPNADWVDNFESDPANALAWAYDIVCNGNEIGGGSIRIHRSDVQKRVFELL 502

Query: 290 ----KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               ++ Q+K     E +             P   GIA G+DR+ ML+ GA+++ +VI  
Sbjct: 503 GISEEQAQDKFGFLLEAFK---------YGPPPHGGIAFGWDRICMLLAGADSLRDVIAF 553

Query: 346 P 346
           P
Sbjct: 554 P 554


>gi|288921169|ref|ZP_06415456.1| aspartyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288347426|gb|EFC81716.1| aspartyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 603

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 66/187 (35%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
              R +  L  R+ +  +LR  F ++ F+E+++  L   +P      R F          
Sbjct: 140 RRERMQRNLRTRSAVLGALRSAFADSGFVEVETPLLMPSTPEG---AREFVVPSRQ---F 193

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G ++ F  A   R+ +     Q EFT L+   +      
Sbjct: 194 PGSFYALPQSPQLFKQLLMVGGMDRYFQLARCLRDEDLRADRQYEFTQLDLEMSF----- 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
              D  +++   +        +    +       E +T  +A  R+  +D        + 
Sbjct: 249 --VDVDDVLGVVSSAVLAAAGAAVEGSGRAMPPIERLTWHDAMNRF-GVDKPDLRFGMEL 305

Query: 192 PDRHLLY 198
            +   ++
Sbjct: 306 VELTAIF 312



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 46/146 (31%), Gaps = 15/146 (10%)

Query: 219 SRILIEKIEPNLGINCCTILDRYPAP-ESALANIYPADPRFTKR---------FELYACN 268
             +    +               P P        +P+D    +          ++L    
Sbjct: 426 GELRFVWVVDFPLFVGVDATTGRPKPGHHPFTRPHPSDVEKMESDPLAVRSLAYDLVLNG 485

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFD 327
            EL +    + +   Q+  F           +E       FL       P   G A G D
Sbjct: 486 WELGSGSIRIHESELQQRIF----GLLGISPDEAQQRFGFFLTPFGYGAPPHGGFAFGID 541

Query: 328 RLVMLVTGANNINEVIWTPFSQSNQE 353
           RLV ++ G +NI EVI  P +QS  +
Sbjct: 542 RLVAILAGEDNIREVIAFPKTQSGLD 567


>gi|237713222|ref|ZP_04543703.1| aspartyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262406638|ref|ZP_06083187.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294807778|ref|ZP_06766569.1| aspartate--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229446689|gb|EEO52480.1| aspartyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262355341|gb|EEZ04432.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294445016|gb|EFG13692.1| aspartate--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 587

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 71/200 (35%), Gaps = 22/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R+Y     FIE+++  L   +P      R F     +   
Sbjct: 131 LRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +       +            + ++ A+A  +Y   D          
Sbjct: 246 IITTFEGMAKHLFKTLRGVELN---------EPFQRMSWADAM-KYYGSDKPDLRFGMKF 295

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  +
Sbjct: 296 VE---LMDIMKGHGFSVFDN 312



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + D   Q   FE           E       FL    
Sbjct: 465 AAVRADAYDMVINGVEVGGGSIRIHDAKLQAKMFEIL-----GFTPEKAEAQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|315503203|ref|YP_004082090.1| aspartyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315409822|gb|ADU07939.1| aspartyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 601

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 6/156 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                 A++A +       +  +    + E+ +               A         P 
Sbjct: 403 AARIEIAKRANLIDESAWAFCWVVDAPMFERTDEGGWTAVHHPFTSPNAEWVDRFEEAP- 461

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           D      +++     E+      +     Q+  F+          +E        L    
Sbjct: 462 DRALAYAYDIVCNGNEIGGGSIRIHRGDVQQRVFDLLGITA----DEAQDKFGFLLEAFK 517

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              P   GIA G+DR+ ML+ GA++I EVI  P ++
Sbjct: 518 YGAPPHGGIAFGWDRVCMLLAGADSIREVIAFPKTR 553



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 64/192 (33%), Gaps = 26/192 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   + R            +  R+      R    E  F+EI++ +L   +P      R 
Sbjct: 116 DIRLKYRYLDLRRGGPAKAMRLRSRANQIARGVLHERDFLEIETPTLTRSTPEGA---RD 172

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F   + +Q        L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+
Sbjct: 173 FLVPVRLQ--PGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQPEFTQLD 230

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  + + ++     I+    +                      IT  +A +RY   D
Sbjct: 231 IEMSFVTEDDVIDLGEAIVSALWKDLAGYEI---------ARPIPRITWHDAMSRY-GSD 280

Query: 182 LGTTLDNPDQPD 193
                   +  +
Sbjct: 281 KPDLRYGVELTE 292


>gi|188994130|ref|YP_001928382.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|238691459|sp|B2RHE0|SYD_PORG3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|188593810|dbj|BAG32785.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 587

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 64/187 (34%), Gaps = 18/187 (9%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  +  R+ +   +R+Y     F+E+++  L   +P      R F     +   
Sbjct: 132 LRRHCVRSNMELRHRMALEVRKYLDGEGFLEVETPMLIKSTPEG---ARDFVVPSRMN-- 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E 
Sbjct: 187 PGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +           S              +T  +A   Y +    T  D    
Sbjct: 247 VLSTFEGMAKHLFRTIRHVEIS---------EAFPRMTWHDAMKYYGSDKPDTRFDMRFV 297

Query: 192 PDRHLLY 198
               +L 
Sbjct: 298 ELMDVLK 304



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 54/188 (28%), Gaps = 5/188 (2%)

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             T+         I  G  L    +    L      Q G+R  +  +   +    L E  
Sbjct: 378 RRTMEAEPGDLILILSGDDLMKTRKQLCELRLEVGSQLGLRDKNKFSCLWVVDFPLFEWD 437

Query: 227 EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
           E              P PE                +++    +E+      + D   Q+ 
Sbjct: 438 EETKRFYAMHHPFTSPKPEDIPLLDTDPGAVRANAYDMVINGVEVGGGSIRIHDSALQQK 497

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            FE           +        +       P   G+A G DR V L  G ++I + I  
Sbjct: 498 MFE----LLGFTPEKAQEQFGFLMNAFKYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAF 553

Query: 346 PFSQSNQE 353
           P + + ++
Sbjct: 554 PKNNAGRD 561


>gi|170017025|ref|YP_001727944.1| aspartyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|238688960|sp|B1MY98|SYD_LEUCK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|169803882|gb|ACA82500.1| Aspartyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 589

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ I SS   +  +N FI I++  L   +P     ++            
Sbjct: 133 RRPEMQKNLRIRSKIMSSAMHFMDQNDFINIETPILAKSTPEGARDYLVPSRIFPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ F  A A+R+ +     QPEFT ++   +  S   
Sbjct: 193 LPQ------SPQLFKQLLMGSGFDRYFQIARAFRDEDLRGDRQPEFTQMDVETSFMS--- 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                 + IR       + + S         ++   +T  E+  R+   D        + 
Sbjct: 244 -----ADEIRELVNAWVKAMMSDVVNFDLDTTKIPTLTWQESMDRF-GTDKPDLRIAYEL 297

Query: 192 PD 193
            D
Sbjct: 298 KD 299



 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 47/147 (31%), Gaps = 13/147 (8%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR--FTKRFE 263
           I + +   ++ I    L E  E              P  E         DP     + ++
Sbjct: 418 IDMTNPWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLDDGEDPHQAHAQSYD 477

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM----PQS 319
           L     EL +    +     Q    +           E       FL  L  M    P  
Sbjct: 478 LVLNGYELGSGSIRIHRMDIQEKMLKAL-----GFTPEAAHEAFGFL--LEGMTFGFPPM 530

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            GIA+G DRL ML+ G  NI EVI  P
Sbjct: 531 GGIALGLDRLAMLLAGQENIREVIAFP 557


>gi|158297420|ref|XP_317655.3| AGAP007844-PA [Anopheles gambiae str. PEST]
 gi|157015186|gb|EAA12212.3| AGAP007844-PA [Anopheles gambiae str. PEST]
          Length = 600

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYF-VENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQD 70
            R R     L  R+ I   +RE    +  F+E+++ +L + +PG       F        
Sbjct: 141 LRNRDLQHNLRLRSQIIMRMRECMINDYGFVEVETPTLFRRTPGGAQE---FVVPSRKPG 197

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
           H      L  SP+   + L+    ++ F  A  +R+       QPEFT L+   +    E
Sbjct: 198 HF---YSLVQSPQQFKQMLMVGAIDRYFQIARCYRDESTRPDRQPEFTQLDIELSFTDRE 254

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +++    ++            S+        +    +T+AEA  R+ +    T      
Sbjct: 255 SVIQLIEQVL----------TKSWPYSENPIRAPFPRMTLAEAMERFGSDKPDTRFGYEL 304

Query: 191 Q 191
           Q
Sbjct: 305 Q 305



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 49/142 (34%), Gaps = 10/142 (7%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD--PRFTKRFELY 265
            AH+  W   F      +    +          +P   +AL++    +     +  ++L 
Sbjct: 436 HAHNFLWVVDFPMFSENEETGQIESTHHPFTAPHPEDAAALSDGCTENIYKIRSLAYDLV 495

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
              +E+      + +   QR   +  ++         +      L  L    P   G A+
Sbjct: 496 WNGVEIGGGSIRIHNSQLQRTVLKDVLKI-------EHAHLHHLLDALESGAPPHGGFAI 548

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           G DR V L+  A +I +VI  P
Sbjct: 549 GLDRYVALLCNAPSIRDVIAFP 570


>gi|33519906|ref|NP_878738.1| aspartyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|46577209|sp|Q7VQX8|SYD_BLOFL RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|33504251|emb|CAD83514.1| aspartyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 576

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 15/118 (12%)

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----- 289
              +   P     +      +   ++ +++     E+ +    +     Q+  F+     
Sbjct: 454 MHHMFTAPKDNDLICLKRNPELAVSEAYDIVINGCEVGSGSVRIHSYKLQQAMFDILGIT 513

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +E Q+KK             +  L    P  +GIA+G DRLVML+T +NNI +VI  P
Sbjct: 514 RENQQKKFG---------CLMNALKYGAPPHAGIALGLDRLVMLLTKSNNIRDVIAFP 562



 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 55/156 (35%), Gaps = 20/156 (12%)

Query: 3   QIPSQPWWN--RDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     +   +   +      RRP +      R+ + +    +      + ID+  L 
Sbjct: 108 PLPLDIHQDNIEENRLKYRYLDLRRPIMFHNIQTRSRVMALTHRFMELEGLLNIDTPVLA 167

Query: 51  -YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             +P     ++      +     + +      SP+   + L+ AG ++ +     +R+ +
Sbjct: 168 KSTPEGARDYLVPSRLHINKYYALPQ------SPQMFKQLLMIAGIDRYYQITKCFRDED 221

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
                QPEFT ++   +  + +++ +     I    
Sbjct: 222 LRSDRQPEFTQIDVEISFITAKKIRELMEFFICKLW 257


>gi|220916524|ref|YP_002491828.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254781710|sp|B8JH60|SYD_ANAD2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219954378|gb|ACL64762.1| aspartyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 603

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 60/179 (33%), Gaps = 17/179 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
                +  L+ R  +    R YF +  F+E+++  +   +PG   +   F     +    
Sbjct: 140 RRAPLQRTLMTRAKVNHLTRNYFTDKGFLELETPFMVKYTPGGARN---FLVPSRLN--- 193

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   +  + AG ++ F     +R+ +     QPEFT ++   +      
Sbjct: 194 PGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQPEFTQIDVEMSFVEQND 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           +      ++    +                    + +   E+ A+Y N       D P 
Sbjct: 254 VFDVMEGLVVKLWKEVLGIEIP---------RPFQRMPFEESMAKYGNDKPDLRFDMPH 303



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 54/161 (33%), Gaps = 13/161 (8%)

Query: 200 QAQQAGIRVAHD----DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            A++ G+   +       +  + +  L E  E +            P             
Sbjct: 423 LAKRMGLIPEYGSGGAWRFLWVVNPPLFEYDEESGQWAAAHHAFTRPHDSDLQFLESDPG 482

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACL 313
                R++L     E+      L DP  Q   F      K       E        L  L
Sbjct: 483 KVNCYRYDLVLNGFEIGGGSIRLHDPEVQARVF------KAMGITDEEARSKFGFLLDAL 536

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   GIA+G DRLVML+TGA ++ +V+  P +Q   +
Sbjct: 537 KMGAPPHGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTD 577


>gi|163840731|ref|YP_001625136.1| aspartyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162954207|gb|ABY23722.1| aspartyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 617

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 31/212 (14%)

Query: 3   QIP--SQPWWN--RDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
            +P       +   +   R R            L  R+ +    R    +  F+EI++ +
Sbjct: 122 PLPFQIDEHGDVGEEARLRHRYLDLRRAPMAHNLKLRSEVNRVARNLLHDEGFVEIETPT 181

Query: 49  LQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +   +PG     R F     +         L  SP+   + L   G EK +  A  +R+ 
Sbjct: 182 MTLSTPGG---ARDFVVPARL--APGNGYGLAQSPQLFKQLLQVGGFEKYYQIARCYRDE 236

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT L+   +    E ++     I+             ++ ++       + 
Sbjct: 237 DFRADRQPEFTQLDIEASFVEEEDILALGERIVSAL----------WKLIDFEIPLPIQR 286

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +   EA AR+   D        +  D    + 
Sbjct: 287 MPYWEAMARF-GSDKPDLRFGQELTDLTEYFK 317



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 17/114 (14%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF------EKEM 292
           + +P++     +  DP       +++     E+      +     Q   F      E + 
Sbjct: 469 FTSPKAEFMENFDQDPAAALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFALMGLDETQQ 528

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           QE      E +             P   GIA+G+DR V L+ G  +I +VI  P
Sbjct: 529 QETFGFLLEGFK---------YGAPPHGGIALGWDRTVALLAGVESIRDVIAFP 573


>gi|134098612|ref|YP_001104273.1| aspartyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|166225424|sp|A4FBC3|SYD_SACEN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|133911235|emb|CAM01348.1| aspartyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 606

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 69/212 (32%), Gaps = 30/212 (14%)

Query: 3   QIP---SQPWWN-RDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
            +P    +      +   R R            +  R+ +    R+      F+E+++ +
Sbjct: 106 PLPFPLDEHLEVGEETRLRHRYLDLRRNGPAKAMRMRSEVNRIARDVLHGRDFVEVETPT 165

Query: 49  LQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           +   +P      R F     +Q        L  SP+   + L+  G E+ F  A  +R+ 
Sbjct: 166 MTRSTPEG---ARDFLIPARLQ--PGNWYALPQSPQLFKQLLMVGGLERYFQIARCYRDE 220

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT L+   +    + +++    II                         + 
Sbjct: 221 DFRADRQPEFTQLDIEMSFVDQDDVIELGEEIISALWRETAGHEIP---------RPIQR 271

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +T A+A AR+   D        +  +    + 
Sbjct: 272 MTYADAMARF-GTDKPDLRFGLELTEMTEYFA 302



 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 19/121 (15%)

Query: 236 TILDRYP--APESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE-- 289
                +P  +P +   + + +DP       +++     E+      +     Q+  FE  
Sbjct: 444 WTAVHHPFTSPNADWVDNFESDPANALAWAYDIVCNGNEIGGGSIRIHRSDVQKRVFELL 503

Query: 290 ----KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               ++ Q+K     E +             P   GIA G+DR+ ML+ GA+++ +VI  
Sbjct: 504 GISEEQAQDKFGFLLEAFK---------YGPPPHGGIAFGWDRICMLLAGADSLRDVIAF 554

Query: 346 P 346
           P
Sbjct: 555 P 555


>gi|46446018|ref|YP_007383.1| aspartyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|62287567|sp|Q6ME91|SYD_PARUW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46399659|emb|CAF23108.1| probable aspartate-tRNA ligase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 599

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 67/180 (37%), Gaps = 27/180 (15%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-H 58
           N +   + R            L+ R+    ++R Y     F+EI +  L + +P     +
Sbjct: 129 NEELRLKYRYLDIRRGDVAKKLITRHQAMLAVRNYLNNQGFLEISTPILGKSTPEGARDY 188

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +            + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT
Sbjct: 189 LVPSRVYPGNFYALPQ------SPQIFKQLLMISGMDRYFQIAQCFRDEDLRADRQPEFT 242

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   +  + E LM    ++I+   +  +         N +  +  + ++ A     Y 
Sbjct: 243 QIDMEMSFGTPEDLMNIVEDLIKTVFKTCS---------NIDVPTPFKRLSHAICMEEYG 293



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 59/174 (33%), Gaps = 9/174 (5%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPNLGINCCTILDRY 241
             T    +Q   HL    A+   +   H   +  +    +     E     +        
Sbjct: 403 ANTPSKTNQALDHLRRKIARDRNLVDPHHYEFLWVTDFPLFSWNEEEKRLQSEHHPFTSP 462

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
              +  L    P   R +  +++     E+      + +   Q+  FE     + K   E
Sbjct: 463 HLEDLHLMETNPLKMRSS-GYDIVLNGYEIGGGSQRIHNSDLQQKIFE-----RLKFSPE 516

Query: 302 TYPI-DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                   FL  L    P   GIA+G DR++M++T   NI +VI  P +Q   +
Sbjct: 517 ELETKFGFFLEALNYGTPPHLGIALGLDRIIMILTQTENIRDVIAFPKTQKASD 570


>gi|299783164|gb|ADJ41162.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Lactobacillus fermentum CECT 5716]
          Length = 343

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 7/150 (4%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-- 257
            A++  +   +   +  + +  + E  E                 +         DP   
Sbjct: 162 IAKELDLIDENKFNYLWVINWPMFEYDEGFGKWIAAHHPFTMLNEDDLKYLEEGEDPHQA 221

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
             + +++     E+      + DP  Q   F+     K+             +  L   M
Sbjct: 222 HAQSYDIVLNGNEIGGGSIRIHDPEVQEKVFKALGYTKEA----AQARFGFLIKALENGM 277

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   G+A G DR VML+  A++I +VI  P
Sbjct: 278 PPEGGMAFGLDRWVMLLAHADSIRDVIAFP 307


>gi|330844656|ref|XP_003294234.1| hypothetical protein DICPUDRAFT_159202 [Dictyostelium purpureum]
 gi|325075342|gb|EGC29242.1| hypothetical protein DICPUDRAFT_159202 [Dictyostelium purpureum]
          Length = 1269

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 21/181 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDH 71
            RR      +  R+ +  + R Y V   FIE+++ +L + +P      R +         
Sbjct: 229 LRRDQVQSNIRLRSRLSMAARNYLVGQDFIEVETPTLFRPTPEG---AREYLVPTRNH-- 283

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   +  + E 
Sbjct: 284 -GQFYSLPQSPQQYKQLLMVGGVDRYFQLARCYRDEDLRSDRQPEFTQIDMELSFVNCEM 342

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   + A            N   +  + T  +  +RY  ID   T     +
Sbjct: 343 IYTIIEGLLKKLWKEAG----------FNIDYKFPFYTYEQVLSRY-GIDKPDTRYALAE 391

Query: 192 P 192
           P
Sbjct: 392 P 392


>gi|197121726|ref|YP_002133677.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|238689889|sp|B4UIE3|SYD_ANASK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|196171575|gb|ACG72548.1| aspartyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 603

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 54/161 (33%), Gaps = 13/161 (8%)

Query: 200 QAQQAGIRVAHD----DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            A++ G+   +       +  + +  L E  E +            P             
Sbjct: 423 LAKRMGLIPEYGSGGAWRFLWVVNPPLFEYDEESGQWAAAHHAFTRPHDSDLQFLESDPG 482

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACL 313
                R++L     E+      L DP  Q   F      K       E        L  L
Sbjct: 483 KVNCYRYDLVLNGFEIGGGSIRLHDPEVQARVF------KAMGISDEEARSKFGFLLDAL 536

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   GIA+G DRLVML+TGA ++ +V+  P +Q   +
Sbjct: 537 KMGAPPHGGIALGMDRLVMLLTGAESLRDVVAWPKTQKGTD 577



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 18/205 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
                +  L+ R  +    R YF +  F+E+++  +   +PG   +   F     +    
Sbjct: 140 RRAPLQRTLMTRAKVNHLTRNYFTDGGFLELETPFMVKYTPGGARN---FLVPSRLN--- 193

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   +  + AG ++ F     +R+ +     QPEFT ++   +      
Sbjct: 194 PGKFYALAESPQLFKQLYMMAGFDRYFQIVRCFRDEDLRLDRQPEFTQIDVEMSFVEQND 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    +                    + +   E+ A+Y N       D P  
Sbjct: 254 VFDVMEGLVVKLWKEVLGIEIP---------RPFQRMPFEESMAKYGNDKPDLRFDMPHV 304

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSD 216
               L+       G+ + H+     
Sbjct: 305 VLTDLVRQH-DGGGVPLMHEAVKGK 328


>gi|171185377|ref|YP_001794296.1| asparagine synthetase A [Thermoproteus neutrophilus V24Sta]
 gi|170934589|gb|ACB39850.1| tRNA synthetase class II (D K and N) [Thermoproteus neutrophilus
           V24Sta]
          Length = 353

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 95/332 (28%), Gaps = 41/332 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               +  I  ++REY     F+E+        P  +  IR    +    D       + +
Sbjct: 48  VFKVQAAIVKAIREYLDGRGFVEVLPPI--VGPVTDPGIR--GAKQASIDFYGHEYKVMS 103

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC----LHQPEFTMLEWYRAHESYEQLMKDC 136
           S     K+ +AA   KI+  +   R           H  EF  ++       Y Q M+  
Sbjct: 104 SAILY-KQYMAASLGKIYFVSPNLRLEPPDSLYTGRHLVEFFQVDIEMYGADYGQAMEVA 162

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             ++    +   ++                             ++       P+      
Sbjct: 163 EGLVTHVVKRVREEYGRQ-------------------------LEDVLGRSLPEFKPPFK 197

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
            Y  ++   I  ++              +   +        +  YP    +       DP
Sbjct: 198 RYPHSEAIKIVNSYGCRNDPRSELTWECEKLMSGLHAQPFFVYDYPR--GSRGFYDREDP 255

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM 316
           +       +   +       E +   E+ +  E+ M   ++   +     E FL  L E+
Sbjct: 256 QRPGVLRDFD--MLYPEGFGEAISGAEREYEPERVMARIREGGEDPRKY-EWFLQMLKEL 312

Query: 317 PQ--SSGIAMGFDRLVMLVTGANNINEVIWTP 346
               ++G  +G +RL   + G   + E    P
Sbjct: 313 YPLKTAGFGIGVERLTRYICGLRALWEARPYP 344


>gi|226366319|ref|YP_002784102.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254781747|sp|C1B4G8|SYD_RHOOB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|226244809|dbj|BAH55157.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 602

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 73/198 (36%), Gaps = 29/198 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            +  R+ + ++ R     ++F+E+++ +L   +P      R 
Sbjct: 118 EARLKYRYLDLRREGPGHAIRLRSKVNAAARAVLAHHEFVEVETPTLTRSTPEGA---RD 174

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     +Q       Y L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L
Sbjct: 175 FLVPARLQ---PGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQPEFTQL 231

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + + ++     ++    ++   +I +              +T AEA  RY   
Sbjct: 232 DIEMSFVNQDDVILLAEEVLTSLWKLVGHEIKT----------PIARMTYAEAMRRY-GS 280

Query: 181 DLGTTLDNPDQPDRHLLY 198
           D        +  +    +
Sbjct: 281 DKPDLRFGVELVECAEFF 298



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 35/106 (33%), Gaps = 5/106 (4%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P PES               +++     E+      +     Q   F+         + E
Sbjct: 454 PKPESIDTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGIS----HEE 509

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   L       P   GIA G+DR+  L+ G ++I EVI  P
Sbjct: 510 AEEKFGFLLDAFAFGAPPHGGIAFGWDRITALLAGVDSIREVIAFP 555


>gi|126465244|ref|YP_001040353.1| aspartate-ammonia ligase [Staphylothermus marinus F1]
 gi|126014067|gb|ABN69445.1| aspartate-ammonia ligase [Staphylothermus marinus F1]
          Length = 417

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 57/331 (17%), Positives = 101/331 (30%), Gaps = 44/331 (13%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEF 84
           + +    RE      FIE+    +   S       +   T+           Y  TS   
Sbjct: 116 SYVTRYSRENLYSKGFIELLPPMISLASDPGLRGAKKLKTKYYG------ETYELTSSVI 169

Query: 85  SCKKLLAAGEEKIFCFAHAWRNGE----QGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
             K+   A  EK+F  A   R           H  EFT L+   A    E +++    ++
Sbjct: 170 MFKQASVAVYEKVFFTARNIREEPPENIWTGRHLSEFTQLDIEWAMSDLEDVIRLAEELL 229

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
              +++   K                            +I           P   + Y +
Sbjct: 230 YTVSKIIADKHIDLIY----------------------DIGERKEPIILKPPFPRIRYDE 267

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-IYPADPRFT 259
           A +   ++     W    +     KI      +    +  YP           P DPR+ 
Sbjct: 268 ALELARKLGEPVEWGKELTHKAETKIAEYY--DSPVWIIGYPVISRGFYYLPDPDDPRYN 325

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT--EMP 317
             F L      L     E++D   + +R+ + ++  KK+        E F+  +    +P
Sbjct: 326 LDFNL-----LLPEGYGEVIDGGTREYRYPQIIERIKKLGEPLDKY-EWFIELVKEGGIP 379

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            SSG  +G +RL   + G  ++      P  
Sbjct: 380 PSSGWGLGLERLTRYLAGHKHVGYATIFPKL 410


>gi|54025619|ref|YP_119861.1| aspartyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|62287534|sp|Q5YTJ4|SYD_NOCFA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|54017127|dbj|BAD58497.1| putative aspartyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 597

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 76/202 (37%), Gaps = 24/202 (11%)

Query: 5   PSQPWWNRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETH 58
           P +    +  +   RR      +  R+ + ++ RE    ++F+E+++ +L   +P     
Sbjct: 115 PGEEARLKHRYLDLRREGPAHAIRLRSKVNAAAREVLARHEFVEVETPTLTKSTPEGA-- 172

Query: 59  IRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
            R F     +Q       Y L  SP+   + L+  G E+ F  A  +R+ +     QPEF
Sbjct: 173 -RDFLVPARLQ---PGNFYALPQSPQLFKQLLMVGGIERYFQIARCYRDEDFRADRQPEF 228

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T L+   +      ++     I+    ++   +I +             ++T AEA  R+
Sbjct: 229 TQLDIEMSFVEQADVILLAEEILVALWKLIGYEIPT----------PIPHMTYAEAMRRF 278

Query: 178 ANIDLGTTLDNPDQPDRHLLYL 199
              D        +  +    + 
Sbjct: 279 -GSDKPDLRFGVEITECTEYFK 299



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           +            P PES               +++     E+      +     Q   F
Sbjct: 441 HSAWTAVHHAFTSPKPESLDTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVF 500

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +           E        L       P   GIA G+DR+V L+ G ++I EVI  P
Sbjct: 501 KVMGI----GEQEAQEKFGFLLDAFAYGAPPHGGIAFGWDRIVALLAGLDSIREVIAFP 555


>gi|157803333|ref|YP_001491882.1| aspartyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166225384|sp|A8EXL4|SYD_RICCK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157784596|gb|ABV73097.1| aspartyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 602

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 61/195 (31%), Gaps = 18/195 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ I S +R       F E  +  L   SP      R F   
Sbjct: 128 KHRFLDLRREKLHNNIILRSQIISHIRHLMTARGFTEFQTPILTASSPEG---ARDFLVP 184

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+  
Sbjct: 185 SRMHSG---KFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  +           +    E     +F+         +    I   E+  +Y   D  
Sbjct: 242 MSFVT--------QEDVFSTIEPVMYDLFTKFTDKKVSETPFIRIPYNESMLKY-GSDKP 292

Query: 184 TTLDNPDQPDRHLLY 198
              +     D   ++
Sbjct: 293 DLRNPIIIADVTEIF 307



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 15/167 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA----PESALAN 250
            +    + +  +       +  I      E  E    I+        P            
Sbjct: 411 KVRIRISDELDLLEKDCFKFCWITDFPFYELNEETAKIDFSHNPFSMPQGGLDALKNAKT 470

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF- 309
                     ++++    IEL +       P      F          Y+E   +++ F 
Sbjct: 471 TAELLELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSI------AGYSEE-EVNKRFG 523

Query: 310 --LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             +       P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 524 SMIRAFKFGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 570


>gi|290893878|ref|ZP_06556856.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290556595|gb|EFD90131.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 591

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299

Query: 192 PDRHLLYL 199
               +   
Sbjct: 300 NVSDVAKD 307



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 44/155 (28%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    +  +  +    L E  E              P  E        +
Sbjct: 409 ALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 469 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTGESAKEQFGFLMDA 522

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 523 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|15673947|ref|NP_268122.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|24212420|sp|Q9CE80|SYD_LACLA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|12725007|gb|AAK06063.1|AE006426_9 aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326407503|gb|ADZ64574.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 590

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 69/216 (31%), Gaps = 14/216 (6%)

Query: 16  YRRRPFLL---KRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR   L     R+    S+REY     FI++++  L   +P     ++           
Sbjct: 132 LRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARDYLVPSRVNKGEFY 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  S E
Sbjct: 192 ALPQ------SPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQPEFTQVDLETSFLSEE 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFS--FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           ++      +I    +       +  F  +  +           +        DL      
Sbjct: 246 EIQDLTEELIAKVMKDVKGIDVTLPFPRMKYDDAMNFYGSDKPDTRFELLLTDLSALAKT 305

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            D           +   ++ A D        ++  +
Sbjct: 306 IDFKVFQEA-EVVKAIVVKDAADKYSRKSIDKLTEQ 340



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 48/180 (26%), Gaps = 18/180 (10%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL-------IEKIEPNLGIN 233
           D    L   D  D     L A +  I           F+ +            E    ++
Sbjct: 382 DNDLVLFVADSLDVANSALGALRLTIGKQQGLIDFRQFNFLWVIDWPMFEWSDEEERYMS 441

Query: 234 CCTILDRYPAPESAL------ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                        A       +            +++     EL      +     Q   
Sbjct: 442 AHHPFTLPTKETQAFLSADGHSKDSDLKKVRAHAYDIVLNGYELGGGSLRINTRQLQEEM 501

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 + +    +        L  L    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 502 LSALGFKLE----DANEQFGFLLEALDYGFPPHGGLALGLDRFVMLLAGKDNIREVIAFP 557


>gi|270284250|ref|ZP_05965803.2| aspartate--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277405|gb|EFA23259.1| aspartate--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 614

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 70/192 (36%), Gaps = 21/192 (10%)

Query: 4   IPSQPWWNRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNET 57
           +P +    +  +   RRP     +  R+ +  + R    E  F E+++   ++ +P    
Sbjct: 140 LPGEDVRLKYRYLDLRRPSMARNIKLRSDMMKAARTVLDEMGFTEVETPTMIKSTPEGA- 198

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F     +         L  SP+   + L+ AG E+ + FA  +R+ +     QPEF
Sbjct: 199 --RDFVVPARL--VPGSWYALPQSPQLLKQLLMVAGVERYYQFARCYRDEDFRADRQPEF 254

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T L+   A    E +M     +I+   + A                    IT  +A  +Y
Sbjct: 255 TQLDMEMAFVDQEDVMAMTERLIQAIWKAAGHD----------VQLPLPRITWQDAMDKY 304

Query: 178 ANIDLGTTLDNP 189
            +        NP
Sbjct: 305 GSDKPDLRFGNP 316



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 56/164 (34%), Gaps = 18/164 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI-----NCCTILDRYPAPES--A 247
            +    A +AG+    D  ++ +    L +K +          +       +P       
Sbjct: 423 AVRVELADRAGLLKPDDFAFTWVVDFPLFKKADDPDDDDVAVGHSKWTSMHHPFTMPSKD 482

Query: 248 LANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
             + +  DP       +++     E+      +     Q    E          +E    
Sbjct: 483 WLDTFDQDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLEV------LGIDEAEAQ 536

Query: 306 DED--FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           D+    L       P  +GIA+G+DR   +++G+++I +VI  P
Sbjct: 537 DKFGFLLEAFKYGAPPHAGIALGWDRTAAILSGSDSIRDVIAFP 580


>gi|46129360|ref|XP_389041.1| hypothetical protein FG08865.1 [Gibberella zeae PH-1]
          Length = 563

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/348 (12%), Positives = 105/348 (30%), Gaps = 45/348 (12%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFST 64
           +       H +    +  R++++ +    + E    ++   +L      G  T       
Sbjct: 247 RHLTL--RHEKPAAVMFVRDVVEDAFHTVYKELDIKKVSPPALVQTQVEGGST------- 297

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
            L   D+  +  YL  S +   + +L       +C   ++R  +     H  E++ +E  
Sbjct: 298 -LFKFDYYGETSYLTQSSQLYLETVLP-VLGDCYCIEKSFRAEKSLTRRHLSEYSHVEAE 355

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
               +++ L+      + C       +  +          + +  T      RY++    
Sbjct: 356 LDFITFDNLLDHL-EHVICRVIDLTLENPTAAEAIKKYNPDFQKPTRPFLRMRYSD---- 410

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                       + +L+ +       +D T+ D  +     K+     IN    L  +P 
Sbjct: 411 -----------AIDWLRERGIKNEEGNDHTFGDDIAEAAERKM--TDEINRPIFLTHFPV 457

Query: 244 PESALANIY-PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
              +        DPR T+  ++    +         +   E     E     K++  + T
Sbjct: 458 EIKSFYMSKAKDDPRVTESVDVLMPGVGEIVGGSMRIWDYE-----ELMAGYKREGIDPT 512

Query: 303 ---YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +  D+             G  +G +R +  +     + E    P 
Sbjct: 513 GYFWYTDQR----KYGSTPHGGYGLGAERFLAWLLKLWTVREACLYPR 556


>gi|281492564|ref|YP_003354544.1| aspartyl-tRNa synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376228|gb|ADA65719.1| Aspartyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 590

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 69/216 (31%), Gaps = 14/216 (6%)

Query: 16  YRRRPFLL---KRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR   L     R+    S+REY     FI++++  L   +P     ++           
Sbjct: 132 LRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARDYLVPSRVNKGEFY 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  S E
Sbjct: 192 ALPQ------SPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQPEFTQVDLETSFLSEE 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFS--FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           ++      +I    +       +  F  +  +           +        DL      
Sbjct: 246 EIQDLTEELIAKVMKDVKGIDVTLPFPRMKYDDAMNFYGSDKPDTRFELLLTDLSALAKT 305

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            D           +   ++ A D        ++  +
Sbjct: 306 IDFKVFQEA-EVVKAIVVKDAADKYSRKSIDKLTEQ 340



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 48/180 (26%), Gaps = 18/180 (10%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL-------IEKIEPNLGIN 233
           D    L   D  D     L A +  I           F+ +            E    ++
Sbjct: 382 DNDLVLFVADSLDVANSALGALRLTIGKQQGLIDFRQFNFLWVIDWPMFEWSDEEERYMS 441

Query: 234 CCTILDRYPAPESAL------ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                        A       +            +++     E+      +     Q   
Sbjct: 442 AHHPFTLPTKETQAFLSADGHSKDSDLKKVRAHAYDIVLNGYEIGGGSLRINTRQLQEEM 501

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 + +    +        L  L    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 502 LSALGFKLE----DANEQFGFLLEALDYGFPPHGGLALGLDRFVMLLAGKDNIREVIAFP 557


>gi|119964210|ref|YP_948028.1| aspartyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119951069|gb|ABM09980.1| aspartyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 626

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 70/195 (35%), Gaps = 22/195 (11%)

Query: 11  NRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +   RRP     +  R+      RE   +  ++EI++ +L   +P      R F  
Sbjct: 149 LKHRYLDLRRPGPARNMRLRSEANRVARELLHQRGYVEIETPTLTRSTPEG---ARDFVV 205

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +         L  SP+   + L   G EK +  A  +R+ +     QPEFT L+   
Sbjct: 206 PARL--APGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQPEFTQLDIEA 263

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    + +++    I++            +Q ++    +    +T  +A A+Y   D   
Sbjct: 264 SFVDQDDVIELGEAIVKAL----------WQLIDVEIPTPIRRMTYLDAMAKY-GSDKPD 312

Query: 185 TLDNPDQPDRHLLYL 199
                +  +    + 
Sbjct: 313 LRFGVELTELTEFFK 327



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 15/111 (13%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEK 295
           P PE         +   +  +++     E+      + +   Q   F      +++ + K
Sbjct: 482 PKPEFLDTFDKDPESALSYAYDIVCNGNEIGGGSIRIHEREVQERVFQLMGLDKEDAETK 541

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                E +             P   G+A+G+DR+V L+ G  +I +VI  P
Sbjct: 542 FGFLLEGFK---------YGAPPHGGMALGWDRVVALLAGVESIRDVIAFP 583


>gi|53713670|ref|YP_099662.1| aspartyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|62287541|sp|Q64TQ1|SYD_BACFR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|52216535|dbj|BAD49128.1| aspartyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 585

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 69/200 (34%), Gaps = 22/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R Y  +  F+E+++  L   +P      R F     +   
Sbjct: 131 LRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +V           N         +  +EA   Y   D          
Sbjct: 246 VITTFEGMAKHLFKVI---------RNIELTGPFPRMPWSEAMRLY-GSDKPDIRFGMQF 295

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  +
Sbjct: 296 VE---LMDILKGHGFSVFDN 312



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    L E  E    +         P PE         
Sbjct: 405 ELRLEMGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    +E+      + D   Q   FE           E         +   
Sbjct: 465 AAVRANAYDMVINGVEVGGGSIRIHDSQLQNKMFE-----LLGFTPERAQEQFGFLMNAF 519

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KFGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|302669512|ref|YP_003829472.1| aspartyl-tRNA synthetase AspS [Butyrivibrio proteoclasticus B316]
 gi|302393985|gb|ADL32890.1| aspartyl-tRNA synthetase AspS [Butyrivibrio proteoclasticus B316]
          Length = 625

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 57/161 (35%), Gaps = 22/161 (13%)

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA---PESALANIYPADPRF--T 259
           G        +  I    + E  E +  +  C      P+        A     DP     
Sbjct: 449 GHMDKEKYEFCWIVDFPMYEIGEESGELEFCHNPFSMPSGGLETLLKAERGEIDPLTITA 508

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL 313
            +++L    IEL +      DP      FE      ++++ K                  
Sbjct: 509 DQYDLVVNGIELSSGAVRNHDPEIMIKAFEMVRLGEEDVKAKF----PAMY------NAF 558

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P  +GIA G DR+VML+ G ++I E+I  P +++ Q+
Sbjct: 559 CYGAPPHAGIAPGVDRMVMLLAGEDSIREIIPFPMNKNAQD 599



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            +   +  ++ R  + ++LR+   E+ F+EI +  L   SP     ++            
Sbjct: 147 RNPEVKKNIILRCNVIAALRQAMTEHGFMEITTPILTASSPEGARDYLVPARKHPGKFYA 206

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ AG ++ F  A  +R+ +      P EF  L+   A  + E
Sbjct: 207 LPQ------APQQFKQLLMTAGFDRYFQIAPCFRDEDARGDRSPGEFYQLDMEMAFATQE 260

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +   C +++    E            +    +    I   EA  +Y +      +D   
Sbjct: 261 DVFSVCEDVLPPVFEKFGT-------YDRASKAPFTRIPYLEAMEKYGSDKPDLRIDLTV 313

Query: 191 QPDRHLLYL 199
                 L  
Sbjct: 314 TDVTETLKD 322


>gi|46577184|sp|Q7TYA6|SYD_MYCBO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 609

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 18/167 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                   +  R+ + ++ R     + F+EI++ ++   +P      R F     +    
Sbjct: 132 RRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGA---RDFLVPARLH--- 185

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 186 PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDAED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           ++     ++     +   +I +              I  AEA  R+ 
Sbjct: 246 IIAISEEVLTELWALIGYRIPT----------PIPRIGYAEAMRRFG 282



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 70/236 (29%), Gaps = 30/236 (12%)

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                     R  A V   +  +         +E E   +A+        D       P 
Sbjct: 333 WQDWAKQRGHRGLAYVLVAEDGTLGGPVAKNLTEAERTGLADHVGAKPG-DCIFFSAGPV 391

Query: 191 QPDRHLL----YLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPN------LGINCCTILD 239
           +  R LL       A + G+       +  +    +     E        +G    T + 
Sbjct: 392 KSSRALLGAARVEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVH 451

Query: 240 R-YPAPESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRF------EK 290
             + AP+    +   +D        +++     E+      +     Q   F      + 
Sbjct: 452 HAFTAPKPEWEDRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKA 511

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E++EK     E +             P   GIA G+DR   L+ G ++I EVI  P
Sbjct: 512 EVEEKFGFLLEAFMF---------GAPPHGGIAFGWDRTTALLAGMDSIREVIAFP 558


>gi|31793755|ref|NP_856248.1| aspartyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638457|ref|YP_978681.1| aspartyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224990951|ref|YP_002645638.1| aspartyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|31619349|emb|CAD94787.1| PUTATIVE ASPARTYL-TRNA SYNTHETASE ASPS (ASPARTATE--TRNA LIGASE)
           (ASPRS) (ASPARTIC ACID TRANSLASE) [Mycobacterium bovis
           AF2122/97]
 gi|121494105|emb|CAL72583.1| Putative aspartyl-trna synthetase aspS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|224774064|dbj|BAH26870.1| aspartyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
          Length = 611

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 18/167 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                   +  R+ + ++ R     + F+EI++ ++   +P      R F     +    
Sbjct: 134 RRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGA---RDFLVPARLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 188 PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDAED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           ++     ++     +   +I +              I  AEA  R+ 
Sbjct: 248 IIAISEEVLTELWALIGYRIPT----------PIPRIGYAEAMRRFG 284



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 70/236 (29%), Gaps = 30/236 (12%)

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                     R  A V   +  +         +E E   +A+        D       P 
Sbjct: 335 WQDWAKQRGHRGLAYVLVAEDGTLGGPVAKNLTEAERTGLADHVGAKPG-DCIFFSAGPV 393

Query: 191 QPDRHLL----YLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPN------LGINCCTILD 239
           +  R LL       A + G+       +  +    +     E        +G    T + 
Sbjct: 394 KSSRALLGAARVEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVH 453

Query: 240 R-YPAPESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRF------EK 290
             + AP+    +   +D        +++     E+      +     Q   F      + 
Sbjct: 454 HAFTAPKPEWEDRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKA 513

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E++EK     E +             P   GIA G+DR   L+ G ++I EVI  P
Sbjct: 514 EVEEKFGFLLEAFMF---------GAPPHGGIAFGWDRTTALLAGMDSIREVIAFP 560


>gi|168070936|ref|XP_001786991.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162659993|gb|EDQ48195.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 272

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 46/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +       +  +    L E  E              P            
Sbjct: 92  ALRLKLAKELDLIDQSKFNFLWVTDWPLFEYDEEEGRFYAAHHPFTMPQRADLELLDTNP 151

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                + +++     EL      + +   Q   F      K+    E Y      L    
Sbjct: 152 KAVKAQAYDIVLNGYELGGGSLRIFEKEIQEKMFSLLGFTKE----EAYAQFGFLLEAFE 207

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DRL+ML++G  N+ + I  P
Sbjct: 208 YGTPPHGGIAIGLDRLIMLLSGRTNLRDTIAFP 240


>gi|313608678|gb|EFR84515.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 591

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 64/209 (30%), Gaps = 17/209 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
               ++     +       +D      + 
Sbjct: 300 NVSDVVKDVDFKVFQSAIENDGEVKAINA 328



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 44/155 (28%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    +  +  +    L E  E              P  E        +
Sbjct: 409 ALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 469 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 522

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 523 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|297717790|gb|ADI50038.1| aspartyl-tRNA synthetase [Candidatus Odyssella thessalonicensis
           L13]
          Length = 596

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 67/200 (33%), Gaps = 27/200 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            ++ R+ + +SLR   +E  F+E  +  L   SP      R 
Sbjct: 123 ETRLRYRFLDLRKEKLHQNIILRSQVITSLRRRMIEQGFLEFQTPILTASSPEG---ARD 179

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTM 119
           F     +        Y L  +P+   + L+ AG ++ F  A  +R+ +      P EF  
Sbjct: 180 FLVPSRLN---PGSFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQ 236

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L++  +  +         ++      V       F             I+  E+  +Y  
Sbjct: 237 LDFEMSFVT-------QEDVFAAIEPVLYGVFEEFAGGKSVTPYPFPRISYEESMLKY-G 288

Query: 180 IDLGTTLDNPDQPDRHLLYL 199
            D     +  +  D   ++L
Sbjct: 289 NDKPDLRNPIEIVDVSEIFL 308



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 51/158 (32%), Gaps = 15/158 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           Q   I   +   +  I    + E+ E    I+        P                  +
Sbjct: 417 QDLKIIENNAFKFCWIVDFPMYEQDEETGKIDFSHNPFSMPQGGMEALLTQDPLTIKAFQ 476

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTE 315
           +++    IEL +       P      FE      ++++++       +            
Sbjct: 477 YDIVCNGIELSSGAIRNHLPEVMYKAFEIVGYTKEDVEKRFGGLLSAFKF---------G 527

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VM++    NI EVI  P +Q  Q+
Sbjct: 528 APPHGGSAPGVDRIVMVLADEPNIREVIAFPMNQQAQD 565


>gi|311113681|ref|YP_003984903.1| aspartate--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945175|gb|ADP41469.1| aspartate--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 590

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 27/192 (14%)

Query: 13  DFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R+    + R    ++ ++E+++ +L   +P      R 
Sbjct: 117 EARLRYRYLDLRRPEPARIMRLRSDANRAARNLLADDGYLEVETPTLTRSTPEG---ARD 173

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L   G EK +  A  +R+ +     QPEFT L+
Sbjct: 174 FLVPARL--APGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQPEFTQLD 231

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + ++     I+             +  ++         +T  EA  +Y   D
Sbjct: 232 IEASFVDQDDIIDLGERIVEA----------VWNLIDVQIPRPIRRMTYTEAMEKY-GTD 280

Query: 182 LGTTLDNPDQPD 193
                   +  +
Sbjct: 281 KPDLRFGLELTE 292



 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + AP+    + +  DP       +++     E+      +     Q   F          
Sbjct: 450 FTAPKPEFLDTFDKDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVF----AVMGIG 505

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G+DR++ L+ G ++I EVI  P
Sbjct: 506 EEEAQEKFGFLLDAFKYGAPPMGGIAFGWDRIISLLAGVDSIREVIAFP 554


>gi|171060683|ref|YP_001793032.1| aspartyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|238689079|sp|B1XWR8|SYD_LEPCP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|170778128|gb|ACB36267.1| aspartyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 598

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + +  L+ R  +   +R++   N FI+I++  L   +P     ++            
Sbjct: 131 RRPQMQKNLMLRYRVSMEVRKFLDANGFIDIETPMLTKSTPEGARDYLVPSRVNDGHFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  S E+
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFLSEEE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR      N             +++  +   ++       +      D    
Sbjct: 245 IRGMFEGMIRTVFR--NTIGVDLPGYPVMTYADAMHKYGSDKPDLRVKLQFTELTDVMRD 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            D  +    AQ    RV
Sbjct: 303 VDFKVFSAPAQSKNGRV 319



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 6/146 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+          +    + E  +     N        P                 K 
Sbjct: 421 KKNGL-FEDKWAPLWVVDFPMFEHDDEGDRWNAVHHPFTAPKDGHEDYMDTDPGKCIAKA 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           +++     EL      +     Q   F       K    +        L  L    P   
Sbjct: 480 YDMVLNGWELGGGSVRIHKAEVQSKVF----SALKIGKEDAQVKFGFLLDALQYGAPPHG 535

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+A G DR+V ++T A +I +VI  P
Sbjct: 536 GLAFGLDRIVTMMTRAESIRDVIAFP 561


>gi|60681943|ref|YP_212087.1| aspartyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81314992|sp|Q5LCK2|SYD_BACFN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|60493377|emb|CAH08163.1| aspartyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|301163382|emb|CBW22932.1| aspartyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 585

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 69/200 (34%), Gaps = 22/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R Y  +  F+E+++  L   +P      R F     +   
Sbjct: 131 LRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +V           N         +  +EA   Y   D          
Sbjct: 246 VITTFEGMAKHLFKVI---------RNIELTEPFPRMPWSEAMRLY-GSDKPDIRFGMQF 295

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  +
Sbjct: 296 VE---LMDILKGHGFSVFDN 312



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    L E  E    +         P PE         
Sbjct: 405 ELRLEMGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    +E+      + D   Q   FE           E         +   
Sbjct: 465 AAVRANAYDMVINGVEVGGGSIRIHDSQLQNKMFE-----LLGFTPERAQEQFGFLMNAF 519

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KFGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|58403364|gb|AAH89191.1| Aspartyl-tRNA synthetase 2 (mitochondrial) [Mus musculus]
          Length = 653

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 12/112 (10%)

Query: 240 RYPAPESALANIY----PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            +P      ++I+      +    + ++L     E+      + D   QR+  E  ++  
Sbjct: 500 HHPFTAPNSSDIHLLYTEPEKVRGQHYDLVLNGNEIGGGSARIHDAQLQRYILETLLK-- 557

Query: 296 KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                E   +    L  L    P   GIA+G DRLV LVTGA +I +VI  P
Sbjct: 558 -----EDVKLLSHLLQALDYGAPPHGGIALGLDRLVCLVTGAPSIRDVIAFP 604



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 186 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGKF---YSLP 239

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      + +    +
Sbjct: 240 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVEQTGIQRLVEGL 299

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+        +    +T AEA A Y   D   T       D
Sbjct: 300 LQY----------SWPGDKDPLVTPFPSMTFAEALATY-GTDKPDTRFGMKIVD 342


>gi|300741587|ref|ZP_07071608.1| aspartate--tRNA ligase [Rothia dentocariosa M567]
 gi|300380772|gb|EFJ77334.1| aspartate--tRNA ligase [Rothia dentocariosa M567]
          Length = 592

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 27/192 (14%)

Query: 13  DFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R+    + R    ++ ++E+++ +L   +P      R 
Sbjct: 117 EARLRYRYLDLRRPEPARIMRLRSDANRAARNLLADDGYLEVETPTLTRSTPEG---ARD 173

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L   G EK +  A  +R+ +     QPEFT L+
Sbjct: 174 FLVPARL--APGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQPEFTQLD 231

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + ++     I+             +  ++         +T  EA  +Y   D
Sbjct: 232 IEASFVDQDDIIDLGERIVEA----------VWNLIDVQIPRPIRRMTYTEAMEKY-GTD 280

Query: 182 LGTTLDNPDQPD 193
                   +  +
Sbjct: 281 KPDLRFGLELTE 292



 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + AP+    + +  DP       +++     E+      +     Q   F          
Sbjct: 450 FTAPKPEFLDTFDKDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVF----AVMGIG 505

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G+DR++ L+ G ++I EVI  P
Sbjct: 506 EEEAQEKFGFLLDAFKYGAPPMGGIAFGWDRIISLLAGVDSIREVIAFP 554


>gi|260205893|ref|ZP_05773384.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289575280|ref|ZP_06455507.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis K85]
 gi|289539711|gb|EFD44289.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis K85]
          Length = 596

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 18/167 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                   +  R+ + ++ R     + F+EI++ ++   +P      R F     +    
Sbjct: 134 RRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGA---RDFLVPARLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 188 PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDAED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           ++     ++     +   +I +              I  AEA  R+ 
Sbjct: 248 IIAISEEVLTELWALIGYRIPT----------PIPRIGYAEAMRRFG 284



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 70/236 (29%), Gaps = 30/236 (12%)

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                     R  A V   +  +         +E E   +A+        D       P 
Sbjct: 335 WQDWAKQRGHRGLAYVLVAEDGTLGGPVAKNLTEAERTGLADHVGAKPG-DCIFFSAGPV 393

Query: 191 QPDRHLL----YLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPN------LGINCCTILD 239
           +  R LL       A + G+       +  +    +     E        +G    T + 
Sbjct: 394 KSSRALLGAARVEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVH 453

Query: 240 R-YPAPESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRF------EK 290
             + AP+    +   +D        +++     E+      +     Q   F      + 
Sbjct: 454 HAFTAPKPEWEDRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKA 513

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E++EK     E +             P   GIA G+DR   L+ G ++I EVI  P
Sbjct: 514 EVEEKFGFLLEAFMF---------GAPPHGGIAFGWDRTTALLAGMDSIREVIAFP 560


>gi|160884601|ref|ZP_02065604.1| hypothetical protein BACOVA_02590 [Bacteroides ovatus ATCC 8483]
 gi|156110340|gb|EDO12085.1| hypothetical protein BACOVA_02590 [Bacteroides ovatus ATCC 8483]
          Length = 611

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 71/200 (35%), Gaps = 22/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R+Y     FIE+++  L   +P      R F     +   
Sbjct: 155 LRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEG---ARDFVVPSRMN-- 209

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 210 PGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQED 269

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +       +            + ++ A+A  +Y   D          
Sbjct: 270 IISTFEGMAKHLFKTLRGVELN---------EPFQRMSWADAM-KYYGSDKPDLRFGMKF 319

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  +
Sbjct: 320 VE---LMDIMKGHGFSVFDN 336



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 429 ELRLEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDP 488

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + D   Q   FE           E       FL    
Sbjct: 489 AAVRADAYDMVINGVEVGGGSIRIHDAKLQAKMFEIL-----GFTPEKAEAQFGFLMNAF 543

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 544 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 577


>gi|213019656|ref|ZP_03335461.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212994697|gb|EEB55340.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 551

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 18/173 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + R  ++ R+ I S LR   +E  F++I +  L   SP     ++            
Sbjct: 97  RREKVRNNIILRSQIISELRRLMIEQGFLDIQTPILTASSPEGARDYLVPSRLNPGKFYA 156

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  + E
Sbjct: 157 LPQ------APQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMSFVTQE 210

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            + +   + +       ++K                 IT  EA  +Y +    
Sbjct: 211 DIFQVIESTLYKVFAKFSRKSVDKD---------FPRITYKEAMLKYGSDKPD 254



 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 57/201 (28%), Gaps = 18/201 (8%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ-------QAGIRVAHDDTWSD 216
           +        +     N+  G ++      +     +  +       + G+       +  
Sbjct: 335 KFLDDNRLNSIKEITNVKPGDSVFFASDKENEAATIAGKVRTLLGSELGLIDDDIFKFCW 394

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           I         + +  I+        P                  +++L    IEL +   
Sbjct: 395 IIDFPYFVYDDKSKKIDFFHNPFSMPHGGLKDLEEKDPLDILAYQYDLVCNGIELSSGAI 454

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVML 332
                      F      K+        +D  F   +       P   GIA G DR+VML
Sbjct: 455 RNNKLNIMYRAFAIAGYSKE-------EVDTKFGALVRAFRFGAPPHGGIAPGVDRMVML 507

Query: 333 VTGANNINEVIWTPFSQSNQE 353
           +    NI EVI  P +Q  ++
Sbjct: 508 LADEPNIREVICFPMNQQGED 528


>gi|83593407|ref|YP_427159.1| aspartyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|97196835|sp|Q2RSM3|SYD_RHORT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|83576321|gb|ABC22872.1| aspartyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 606

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 60/189 (31%), Gaps = 17/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                   ++ R+ + SSLR    +  F+E  +  L   SP      R F     I    
Sbjct: 134 RREDVHANMVLRSKVISSLRRRMTDQGFLEYQTPILTASSPEG---ARDFLVPSRIH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L++  +  +  
Sbjct: 188 PGKFYALPQAPQQFKQMLMVSGFDRYFQVAPCFRDEDSRADRSPGEFYQLDFEMSFVT-- 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                  ++      V       F        +    I   EA  ++   D     +   
Sbjct: 246 -----QEDVFAAIEPVLVGVFEEFGGDRAVTPAPFPRIPYDEAMLKF-GSDKPDLRNPLR 299

Query: 191 QPDRHLLYL 199
             D    + 
Sbjct: 300 NADVTEHFA 308



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 44/155 (28%), Gaps = 17/155 (10%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
                G+R      +       + E  E    I         P  E              
Sbjct: 415 ICDDLGLRETGVFRFCWTVDFPMYEMNEETGQIEFSHNPFSMPQGEMEALETMDPLAIKA 474

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL 313
            ++++    IEL +       P      FE      +E++ +              L   
Sbjct: 475 YQYDIVCNGIELSSGAIRNHLPEIMYKAFEIAGYPKEEVEARFGGM----------LRAF 524

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               P   G A G DR+VML+    NI EVI  P 
Sbjct: 525 KFGAPPHGGSAPGIDRIVMLLADEPNIREVILFPM 559


>gi|295689568|ref|YP_003593261.1| aspartyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295431471|gb|ADG10643.1| aspartyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 612

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 13/198 (6%)

Query: 11  NRDFHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +   RR  L    + R+ +  S+R +     F E  +  L   SP      R F  
Sbjct: 129 LKHRYLDLRRETLHKNIVLRSRVIQSIRNHMFAQGFNEFQTPILTASSPEG---ARDFLV 185

Query: 65  ELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
              +     +  Y L  +P+   + L+ +G ++ F  A  +R+ +       EF  L+  
Sbjct: 186 PSRLH---PEKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSLEFYQLDVE 242

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E +      ++    E              + F      T              
Sbjct: 243 MSFVTQEDVFAAIEPVMHGVFEEFGNGRRVSPISETHTFVNDFGATFEHKGFERLTYAQS 302

Query: 184 TTLDNPDQPDRHLLYLQA 201
                 D+PD       A
Sbjct: 303 MAWYGSDKPDLRNPIKMA 320



 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 49/155 (31%), Gaps = 11/155 (7%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +  +   +   +  I    + E  E    ++        P                  ++
Sbjct: 438 ELKLVDENQFKFCWIVDFPMFEWNEDEKKVDFSHNPFSMPQGGLEALETQDPLTIRAYQY 497

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQ 318
           ++     ELC+       P      FE         Y     ++E F   L       P 
Sbjct: 498 DIVCNGYELCSGAIRNHKPEIMLKAFEI------AGYGPE-VVEEQFGGMLNAFRYGAPP 550

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G+A G DR+VML+     I EVI  P +Q  Q+
Sbjct: 551 HGGLAPGIDRIVMLLADQVAIREVIAFPLNQQGQD 585


>gi|149917881|ref|ZP_01906376.1| aspartyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149821401|gb|EDM80803.1| aspartyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 612

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 40/123 (32%), Gaps = 5/123 (4%)

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                     P  E     +        K ++L     E+      +     Q   FE  
Sbjct: 457 WTSSHHPFTCPKDEHVELLLSDPGKVLAKAYDLVLNGNEVGGGSIRIHRSDVQAKVFEAL 516

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
                    E        L       P   GIA+G DRL ML++GA ++ +VI  P +Q 
Sbjct: 517 GL----GEEEREQKFGFLLDAFKYGPPPHGGIALGLDRLAMLMSGAESLRDVIAFPKTQK 572

Query: 351 NQE 353
            Q+
Sbjct: 573 GQD 575



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 70/211 (33%), Gaps = 19/211 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
                +   + R+ + +  R +     F+E+++  +   +PG   +   F     +    
Sbjct: 144 RRPSLQRNFILRSKVGTLTRTHMAGQGFLELETPYMVKYTPGGARN---FLVPSRLN--- 197

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   +  + +G +K F     +R+ +     QPEFT ++   +  + E+
Sbjct: 198 PGTFYALAESPQIFKQLFMVSGFDKYFQITRCFRDEDLRNDRQPEFTQIDVELSFATPER 257

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           + +    ++R           +              +T AEA  RY +   D    L+  
Sbjct: 258 VFEPIEALMRKLWGELLDTQLAES---------FPRMTWAEAMDRYGSDKPDTRFGLEFT 308

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR 220
           D  ++      A                  +
Sbjct: 309 DLTEKTRGCGFAVFEKAEYVKGICLPGEHGK 339


>gi|298484029|ref|ZP_07002198.1| aspartate--tRNA ligase [Bacteroides sp. D22]
 gi|298269810|gb|EFI11402.1| aspartate--tRNA ligase [Bacteroides sp. D22]
          Length = 587

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 71/200 (35%), Gaps = 22/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R+Y     FIE+++  L   +P      R F     +   
Sbjct: 131 LRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVLIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +       +            + ++ A+A  +Y   D          
Sbjct: 246 IITTFEGMAKHLFKTLRGVELN---------EPFQRMSWADAM-KYYGSDKPDLRFGMKF 295

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  +
Sbjct: 296 VE---LMDVMKGHGFSVFDN 312



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + D   Q   FE           E       FL    
Sbjct: 465 AAVRADAYDMVINGVEVGGGSIRIHDAKLQAKMFEIL-----GFTPEKAEAQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|270668238|ref|ZP_06222511.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270316714|gb|EFA28493.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 108

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 45/107 (42%), Gaps = 8/107 (7%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           +  R  I S +R +  +N F++I++  L   +P     ++            + +     
Sbjct: 1   MKTRAKITSFVRRFMDDNGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQ----- 55

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
            SP+   + L+ +G ++ +     +R+ +     QPEFT ++   + 
Sbjct: 56  -SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSF 101


>gi|325969342|ref|YP_004245534.1| tRNA synthetase class II (D K and N) [Vulcanisaeta moutnovskia
           768-28]
 gi|323708545|gb|ADY02032.1| tRNA synthetase class II (D K and N) [Vulcanisaeta moutnovskia
           768-28]
          Length = 357

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/346 (14%), Positives = 98/346 (28%), Gaps = 43/346 (12%)

Query: 8   PWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELI 67
             W      + +     +  I  +LR++     F E+ +  +   P  +  IR    +  
Sbjct: 39  HSWRWAREDKYKLVFKVQAEIIDALRDFLNSRGFTEVLAPIIG--PVTDPGIR--GAKQA 94

Query: 68  IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC----LHQPEFTMLEWY 123
             D       + +S     K+ +AA   KI+  +   R           H  EF  L+  
Sbjct: 95  TVDFYGMEYKVMSSAILY-KQYMAASLGKIYFLSPNIRFEPNDSVFTGRHLVEFYQLDLE 153

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
               +Y+Q++    ++I    +           +  N           + F RY +    
Sbjct: 154 VYGATYDQVIDLAEDMIIYVIKRVKDNYGKELEIRLNRQLP----DFKKPFKRYTH---- 205

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                              + G +   +        + L    E          +  YP 
Sbjct: 206 -----------KEAVELVNELGCKNPPNTEIRWECEKFLSAYHE------NPLFIIDYPK 248

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR-HRFEKEMQEKKKIYNET 302
              A       DP+       +   +       E +   E+     +   + ++   +  
Sbjct: 249 --GARGFYDREDPQRPGILRDFD--MLYPEGFGEAISGAEREYEPIKVIARMREGGEDPN 304

Query: 303 YPIDEDFLACLTEMPQ--SSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 +L  L E     ++G  +G +RL   V G   + E    P
Sbjct: 305 KY--RWYLEMLRESYPLKTAGFGIGIERLTRYVCGLRAVWEARPYP 348


>gi|15842110|ref|NP_337147.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|18278903|sp|Q50649|SYD_MYCTU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13882393|gb|AAK46961.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
          Length = 594

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 18/167 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                   +  R+ + ++ R     + F+EI++ ++   +P      R F     +    
Sbjct: 132 RRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGA---RDFLVPARLH--- 185

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 186 PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDAED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           ++     ++     +   +I +              I  AEA  R+ 
Sbjct: 246 IIAISEEVLTELWALIGYRIPT----------PIPRIGYAEAMRRFG 282



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 69/236 (29%), Gaps = 30/236 (12%)

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                     R  A V   +  +         +E E   +A+        D       P 
Sbjct: 333 WQDWAKQRGHRGLAYVLVAEDGTLGGPVAKNLTEAERTGLADHVGAKPG-DCIFFSAGPV 391

Query: 191 QPDRHLL----YLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPN------LGINCCTILD 239
           +  R LL       A + G+       +  +    +     E        +G    T + 
Sbjct: 392 KSSRALLGAARVEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVH 451

Query: 240 R-YPAPESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRF------EK 290
             + AP+    +   +D        +++     E+      +     Q   F      + 
Sbjct: 452 HAFTAPKPEWEDRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKA 511

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E +EK     E +             P   GIA G+DR   L+ G ++I EVI  P
Sbjct: 512 EAEEKFGFLLEAFMF---------GAPPHGGIAFGWDRTTALLAGMDSIREVIAFP 558


>gi|15609709|ref|NP_217088.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|148662411|ref|YP_001283934.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148823767|ref|YP_001288521.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167968818|ref|ZP_02551095.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215404520|ref|ZP_03416701.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215412344|ref|ZP_03421104.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215427972|ref|ZP_03425891.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215431528|ref|ZP_03429447.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215446821|ref|ZP_03433573.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218754309|ref|ZP_03533105.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219558574|ref|ZP_03537650.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|253798347|ref|YP_003031348.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 1435]
 gi|254232691|ref|ZP_04926018.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis C]
 gi|254551623|ref|ZP_05142070.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|289553638|ref|ZP_06442848.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 605]
 gi|289570742|ref|ZP_06450969.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T17]
 gi|289746364|ref|ZP_06505742.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis 02_1987]
 gi|289751195|ref|ZP_06510573.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T92]
 gi|289754690|ref|ZP_06514068.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis EAS054]
 gi|289758702|ref|ZP_06518080.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T85]
 gi|289762743|ref|ZP_06522121.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis GM 1503]
 gi|294994318|ref|ZP_06800009.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297635182|ref|ZP_06952962.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297732174|ref|ZP_06961292.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298526045|ref|ZP_07013454.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776845|ref|ZP_07415182.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu001]
 gi|306780609|ref|ZP_07418946.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu002]
 gi|306785373|ref|ZP_07423695.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu003]
 gi|306789973|ref|ZP_07428295.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu004]
 gi|306794053|ref|ZP_07432355.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu005]
 gi|306798451|ref|ZP_07436753.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu006]
 gi|306804331|ref|ZP_07440999.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu008]
 gi|306807630|ref|ZP_07444298.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu007]
 gi|306969831|ref|ZP_07482492.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu009]
 gi|306972960|ref|ZP_07485621.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu010]
 gi|307080671|ref|ZP_07489841.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu011]
 gi|307085258|ref|ZP_07494371.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu012]
 gi|313659508|ref|ZP_07816388.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|1478240|emb|CAB01271.1| PROBABLE ASPARTYL-TRNA SYNTHETASE ASPS (ASPARTATE--TRNA LIGASE)
           (ASPRS) (ASPARTIC ACID TRANSLASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|124601750|gb|EAY60760.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis C]
 gi|148506563|gb|ABQ74372.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148722294|gb|ABR06919.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis F11]
 gi|253319850|gb|ACT24453.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 1435]
 gi|289438270|gb|EFD20763.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 605]
 gi|289544496|gb|EFD48144.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T17]
 gi|289686892|gb|EFD54380.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis 02_1987]
 gi|289691782|gb|EFD59211.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T92]
 gi|289695277|gb|EFD62706.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis EAS054]
 gi|289710249|gb|EFD74265.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis GM 1503]
 gi|289714266|gb|EFD78278.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis T85]
 gi|298495839|gb|EFI31133.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214773|gb|EFO74172.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu001]
 gi|308326544|gb|EFP15395.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu002]
 gi|308329966|gb|EFP18817.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu003]
 gi|308333583|gb|EFP22434.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu004]
 gi|308337610|gb|EFP26461.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu005]
 gi|308341275|gb|EFP30126.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu006]
 gi|308345951|gb|EFP34802.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu007]
 gi|308349083|gb|EFP37934.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu008]
 gi|308352640|gb|EFP41491.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu009]
 gi|308357651|gb|EFP46502.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu010]
 gi|308361593|gb|EFP50444.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu011]
 gi|308365212|gb|EFP54063.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis SUMu012]
 gi|323718845|gb|EGB28001.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis CDC1551A]
 gi|326904186|gb|EGE51119.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis W-148]
 gi|328458117|gb|AEB03540.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis KZN 4207]
          Length = 596

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 18/167 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                   +  R+ + ++ R     + F+EI++ ++   +P      R F     +    
Sbjct: 134 RRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGA---RDFLVPARLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 188 PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDAED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           ++     ++     +   +I +              I  AEA  R+ 
Sbjct: 248 IIAISEEVLTELWALIGYRIPT----------PIPRIGYAEAMRRFG 284



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 69/236 (29%), Gaps = 30/236 (12%)

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                     R  A V   +  +         +E E   +A+        D       P 
Sbjct: 335 WQDWAKQRGHRGLAYVLVAEDGTLGGPVAKNLTEAERTGLADHVGAKPG-DCIFFSAGPV 393

Query: 191 QPDRHLL----YLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPN------LGINCCTILD 239
           +  R LL       A + G+       +  +    +     E        +G    T + 
Sbjct: 394 KSSRALLGAARVEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVH 453

Query: 240 R-YPAPESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRF------EK 290
             + AP+    +   +D        +++     E+      +     Q   F      + 
Sbjct: 454 HAFTAPKPEWEDRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKA 513

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E +EK     E +             P   GIA G+DR   L+ G ++I EVI  P
Sbjct: 514 EAEEKFGFLLEAFMF---------GAPPHGGIAFGWDRTTALLAGMDSIREVIAFP 560


>gi|311264845|ref|XP_003130365.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Sus
           scrofa]
          Length = 408

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 13/158 (8%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY- 252
           R       +  G+ V  D         +      P            +P      ++I+ 
Sbjct: 211 RLECADLLEARGV-VLRDPALFSFLWVVDFPLFFPKEEHPQELESAHHPFTAPHPSDIHL 269

Query: 253 ---PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                    ++ ++L     E+      + +   QR+     ++       E   +    
Sbjct: 270 LYTEPQKVRSQHYDLVLNGNEVGGGSIRIHNAELQRYVLAAVLK-------EDVKLLSHL 322

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L  L    P   GIA+G DRL+ LVTGA +I +VI  P
Sbjct: 323 LQALDYGAPPHGGIALGLDRLMCLVTGAPSIRDVIAFP 360


>gi|260187586|ref|ZP_05765060.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|289448221|ref|ZP_06437965.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis CPHL_A]
 gi|289421179|gb|EFD18380.1| aspartyl-tRNA synthetase aspS [Mycobacterium tuberculosis CPHL_A]
          Length = 596

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 18/167 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                   +  R+ + ++ R     + F+EI++ ++   +P      R F     +    
Sbjct: 134 RRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGA---RDFLVPARLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 188 PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDAED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           ++     ++     +   +I +              I  AEA  R+ 
Sbjct: 248 IIAISEEVLTELWALIGYRIPT----------PIPRIGYAEAMRRFG 284



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 17/116 (14%)

Query: 239 DRYPAPESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRF------EK 290
             + AP+    +   +D        +++     E+      +     Q   F      + 
Sbjct: 454 HAFTAPKPEWEDRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKA 513

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E +EK     E +             P   GIA G+DR   L+ G ++I EVI  P
Sbjct: 514 EAEEKFGFLLEAFMF---------GAPPHGGIAFGWDRTTALLAGMDSIREVIAFP 560


>gi|227431711|ref|ZP_03913741.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352535|gb|EEJ42731.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 591

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ I SS   +   + FI I++  L   +P     ++            
Sbjct: 133 RRPEMQKNLRIRSKIMSSAMHFMDTHDFINIETPVLAKSTPEGARDYLVPSRVFPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A A+R+ +     QPEFT ++   +  +   
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQPEFTQMDVETSFMT--- 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                 + IR       + +           +E   +T  E+  R+   D        + 
Sbjct: 244 -----ADEIRELVNAWVKAMMHDVVDFDLDTAEIPTLTWQESMDRF-GTDKPDLRIAYEI 297

Query: 192 PD 193
            D
Sbjct: 298 KD 299



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 52/158 (32%), Gaps = 14/158 (8%)

Query: 196 LLYLQAQQAG-IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           L    A+    I   +   ++ I    L E  E              P  E         
Sbjct: 409 LRRETAKALDLIDQTNSWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLNDGE 468

Query: 255 DPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY---NETYPIDEDF 309
           DP     + ++L     EL +    +        R + + +  K +     + +      
Sbjct: 469 DPHKAHAQSYDLVLNGYELGSGSIRIH-------RMDIQEKMLKALGFTPEKAHEAFGFL 521

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L  +    P   GIA+G DRL ML+ G  NI EVI  P
Sbjct: 522 LEGMEYGFPPMGGIALGLDRLAMLLAGQENIREVIAFP 559


>gi|297571408|ref|YP_003697182.1| aspartyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931755|gb|ADH92563.1| aspartyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 635

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 27/194 (13%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHI 59
           N +   + R            +  R  +  + R     ++F+EI++ +L   +P      
Sbjct: 148 NEETRLKYRYLDLRRSYEQKAIRLRAKVSQAARRVLDGHEFVEIETPTLIRSTPEGA--- 204

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F     +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT 
Sbjct: 205 RDFIVPARL--APGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQ 262

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   +    E +M    ++++    +   ++ +             ++T  +A   Y  
Sbjct: 263 LDVEMSFVEQEDVMAVAEDVLKEIWGLIGYELPT----------PIPHMTYKDAMENY-G 311

Query: 180 IDLGTTLDNPDQPD 193
            D           D
Sbjct: 312 SDKPDLRFEQKLID 325



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 19/115 (16%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF------EKEM 292
           + +P+    + +  DP       +++     E+      +     Q   F      E++ 
Sbjct: 483 FTSPKPEWLDSFDQDPGNALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGLDEEQA 542

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +EK              L       P   GIA G+DR+V L+T A +I +VI  P
Sbjct: 543 REKFG----------FLLDAFKFGAPPHGGIAFGWDRIVALLTKAPSIRDVIAFP 587


>gi|329890107|ref|ZP_08268450.1| aspartyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328845408|gb|EGF94972.1| aspartyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 610

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 60/182 (32%), Gaps = 8/182 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    ++ R+ +  S+R   V   F+E  +  L   SP      R F     +    
Sbjct: 134 RRERLHKNIVLRSRVIQSIRTRMVAQGFLEYQTPILTASSPEG---ARDFLVPSRMH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  +P+   + L+ +G ++ F  A  +R+ +       EF  L+   +  + E 
Sbjct: 188 PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSLEFYQLDVEMSFVTQED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++        +          + F+     T+          +        D+
Sbjct: 248 VFQAIEPLMHGLFTEFGEGKPVSPIDGTHVFTNDFGQTMEHKGFERLTFEQSMKWYGSDK 307

Query: 192 PD 193
           PD
Sbjct: 308 PD 309



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 49/155 (31%), Gaps = 11/155 (7%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +  +       +  I    + E  E    ++        P                  ++
Sbjct: 436 ELKLVDEDQFKFCWIVDFPMFEWSEEEKKVDFSHNPFSMPQGGMEALETQDPLTIRAYQY 495

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQ 318
           ++     ELC+              FE         Y+    ++E F   L       P 
Sbjct: 496 DIVCNGYELCSGAIRNHKAEIMLKAFEI------AGYD-ASVVEEQFGGMLNAFRFGAPP 548

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G+A G DR+VML+ G   I EVI  P +Q  Q+
Sbjct: 549 HGGLAPGIDRIVMLLAGEQAIREVIAFPLNQQGQD 583


>gi|296126518|ref|YP_003633770.1| aspartyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018334|gb|ADG71571.1| aspartyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 587

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 69/200 (34%), Gaps = 18/200 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    L KR  I ++ R++  +N FI++++  L   +P      R F     +    
Sbjct: 135 RRPKVFNNLYKRFQITNAFRKHLADNGFIDVETPILNKSTPEGA---RDFLVPSRLNAG- 190

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 191 --DFYALPQSPQIFKQILMIGGFDRYYQVAKCFRDEDLRADRQPEFTQVDIETSFLNTDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +    ++     +              +  +    +   +A   Y   D   T      
Sbjct: 249 FLSIMESVTANIVKDVYG---------IDLPTPFPRLNYYDAMEMY-GSDKPDTRFELKL 298

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +          A  + A D
Sbjct: 299 INVEEAVRGCDFAVFKNALD 318



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/363 (14%), Positives = 101/363 (27%), Gaps = 37/363 (10%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN---ETHIRAFSTE 65
           + + D    R+P    +  I++S   +   ++F+      ++    N   + +     T 
Sbjct: 221 FRDEDLRADRQPEF-TQVDIETS---FLNTDEFL----SIMESVTANIVKDVYGIDLPTP 272

Query: 66  LIIQDHIR-KPLYLQTSP----EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
               ++     +Y    P    E     +  A     F       + +           +
Sbjct: 273 FPRLNYYDAMEMYGSDKPDTRFELKLINVEEAVRGCDFAVFKNALDNKFIIRCLNAKGGV 332

Query: 121 E-WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +   R                  A     +       V    FSE     + E       
Sbjct: 333 DKLSRKDIDDFTKYVGIFGAKGLAWMRVTENGLESNIVK--FFSEDNQKKILEVTKAEKG 390

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQ---QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
             L    D P      L  L+ +   +  +       +  +    L E       I+   
Sbjct: 391 DLLFFVADTPKVTYDALGNLRLKVGEKLNLIDKDKLNFLWVVEFPLFEYDHKEKRISATH 450

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF----EKEM 292
                P PE             +  ++L     E+      + D   Q   F      + 
Sbjct: 451 HPFTAPVPEDVPLLDTDVLKVRSDTYDLVLNGNEIGGGGQRIYDSKVQAKIFSLLGIDDE 510

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           + K +            L  L    P   G+A G DR++ML+   ++I EVI  P  ++ 
Sbjct: 511 KAKIRFG--------FLLDALKYGAPPMCGMAFGIDRVIMLLQKQDSIREVIAFP--KTQ 560

Query: 352 QEE 354
           + +
Sbjct: 561 KGQ 563


>gi|170289793|ref|YP_001736609.1| asparagine synthetase A [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173873|gb|ACB06926.1| Aspartyl/asparaginyl-tRNA synthetase [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 372

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 103/334 (30%), Gaps = 22/334 (6%)

Query: 15  HYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK 74
           H   +     R++I  ++R++  +  F+E D   +   P  +   R          +  +
Sbjct: 37  HPIMQEVYRFRHIIARAVRDFLDKEGFVEFD-PIMIG-PVTDPGTR--GAYEFRIPYYGR 92

Query: 75  PLYLQTSPEFSCKKLLAAG-EEKIFCFAHAWRNGEQG----CLHQPEFTMLEWYRAHESY 129
              +  S     + L AA  E K++ F    R+          H  EF  ++       +
Sbjct: 93  EYRIMRSGILYKQLLAAAMEEGKVYFFYPNLRHEPLDAGKTGRHLVEFVQIDLEVRDADH 152

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            ++MK    +I+   +         + +     S+  ++       R    +    +   
Sbjct: 153 LEVMKIAERLIKHVIDHLRDYEDRLRRIWEFFGSKRPFLPEISLPLRRMTHEEAVDILME 212

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                 ++    ++  ++                 +   +        +  YP       
Sbjct: 213 HARRGEVIEELEKRFNVKKPERRLSYKA-EIPWEWEWYLSKINEQPFFIQDYPKGARGFY 271

Query: 250 NI-YPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           +  YP  P     F+L A   + EL +      D      R ++          E   + 
Sbjct: 272 DREYPNRPGILMDFDLLAPEGHGELSSGAAREYDASRVFARMKE--------SGENPELY 323

Query: 307 EDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
           + +L  L      ++G  +G +RLV  +    ++
Sbjct: 324 KWYLEFLRDHGRPTAGFGIGMERLVKYICDLPSV 357


>gi|313633166|gb|EFS00050.1| aspartyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 591

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 60/188 (31%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLIDVVKEA---------KNVTIQKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299

Query: 192 PDRHLLYL 199
               ++  
Sbjct: 300 NVSEVVKD 307



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 47/154 (30%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +    +  +  +    L E  E              P  E        +
Sbjct: 409 ALRNKLGKELDLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                + +++     E+      +     Q   F           +E       FL   L
Sbjct: 469 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRAL-----GFTDEAASEQFGFLMEAL 523

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 524 EYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|119872269|ref|YP_930276.1| asparagine synthetase A [Pyrobaculum islandicum DSM 4184]
 gi|119673677|gb|ABL87933.1| aspartate-ammonia ligase [Pyrobaculum islandicum DSM 4184]
          Length = 353

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 98/346 (28%), Gaps = 41/346 (11%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +  W      + +     +  I  ++REY     F+E+        P  +  IR    + 
Sbjct: 34  RYSWRWAQSEKYKLVFRVQAAIVKAIREYLDGRGFVEVLPPI--VGPVTDPGIR--GAKQ 89

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC----LHQPEFTMLEW 122
              D       + +S     K+ +AA   KI+  +   R           H  EF  ++ 
Sbjct: 90  ASIDFYGHEYKVMSSAILY-KQYMAASLGKIYFVSPNLRLEPPDSIYTGRHLVEFFQVDI 148

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                 Y Q M+    ++    +   ++                             ++ 
Sbjct: 149 EMYGADYGQAMELAEGLVAYVVKRVREEYGKQ-------------------------LED 183

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                 P+       Y  ++   I  ++              +   +        +  YP
Sbjct: 184 VLGRSLPEFKPPFKRYPHSEAIKIVNSYGCRNDPRSELTWECEKLMSGLHAQPFFVYDYP 243

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
               +       DP+       +   +       E +   E+ +  ++ M   ++   + 
Sbjct: 244 R--GSRGFYDREDPQRPGVLRDFD--MLYPEGFGEAISGAEREYEPKRVMARIREGGEDP 299

Query: 303 YPIDEDFLACLTEMPQ--SSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E FL  L E+    ++G  +G +R    + G   + E    P
Sbjct: 300 RKY-EWFLQMLKELYPLKTAGFGIGVERFTRYICGLRAVWEARPYP 344


>gi|217964334|ref|YP_002350012.1| aspartyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|254781738|sp|B8DHM9|SYD_LISMH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|217333604|gb|ACK39398.1| aspartyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571100|emb|CAR84279.1| aspS [Listeria monocytogenes L99]
          Length = 591

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 58/180 (32%), Gaps = 17/180 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 44/155 (28%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    +  +  +    L E  E              P  E        +
Sbjct: 409 ALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 469 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 522

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 523 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|144227528|gb|AAZ44326.2| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 567

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 66/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L  R  I   +R +  +N FIEI++  L   +P      R+F      +   
Sbjct: 123 RRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEG---ARSFLVPTRQKGKF 179

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +  EK F FA  +R+ +     Q EF  L+      ++E++
Sbjct: 180 ---FALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDRQFEFLQLDLEFGFPTFEKI 236

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            ++   +IR            +  +  N   +   +T  EA   Y   D           
Sbjct: 237 SEEIEALIRDL----------WTKIFPNLAIDFPKLTYFEAIKNY-GTDKPDLRFETKLF 285

Query: 193 DRHLLYLQ 200
           D   L   
Sbjct: 286 DLDFLNDI 293



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 12/157 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L  L A++  +       ++ I +  L E    N   +                +  P 
Sbjct: 388 ALRNLVAKKYKLINEDQFKFAWIINWPLFELDINNKLTSAHHPFTAPTLESQQFLHKNPL 447

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                + ++L     EL +    + +   Q+  F         +  +   I   F   L 
Sbjct: 448 KV-QAQAYDLVLNGFELGSGSIRIHNAELQKQVFTI-------LGLDQDQIHTQFGALLR 499

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                +P   G A G DRL+M++   N+I +VI  P 
Sbjct: 500 AFNYGVPPHGGFAFGLDRLIMILRKTNSIRDVIAFPV 536


>gi|29346282|ref|NP_809785.1| aspartyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253568298|ref|ZP_04845709.1| aspartyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|46577253|sp|Q8A9E3|SYD_BACTN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29338177|gb|AAO75979.1| aspartyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251842371|gb|EES70451.1| aspartyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 587

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 20/199 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RR   R  L  R+ +   +R+Y     FIE+++  L          R F     +    
Sbjct: 131 LRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVL--IGSTPEGARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQEDI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +       +            + +  A+A  +Y   D           
Sbjct: 247 ISTFEGMAKHLFKTLRGVELT---------EPFQRMPWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFSVFDN 312



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGSQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + D   Q   FE           E       FL    
Sbjct: 465 AAVRADAYDMVVNGVEVGGGSIRIHDAQLQARMFEIL-----GFTPEKAQAQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|253565618|ref|ZP_04843073.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251945897|gb|EES86304.1| aspartyl-tRNA synthetase [Bacteroides sp. 3_2_5]
          Length = 585

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 69/200 (34%), Gaps = 22/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R Y  +  F+E+++  L   +P      R F     +   
Sbjct: 131 LRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +V           N         +  +EA   Y   D          
Sbjct: 246 VITTFEGMAKHLFKVI---------RNIELAEPFPRMPWSEAMRLY-GSDKPDIRFGMQF 295

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  +
Sbjct: 296 VE---LMDILKGHGFSVFDN 312



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    L E  E    +         P PE         
Sbjct: 405 ELRLEMGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    +E+      + D   Q   FE           E         +   
Sbjct: 465 AAVRANAYDMVINGVEVGGGSIRIHDSQLQNKMFE-----LLGFTPERAQEQFGFLMNAF 519

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KFGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|313618813|gb|EFR90703.1| aspartyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 591

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 60/188 (31%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299

Query: 192 PDRHLLYL 199
               ++  
Sbjct: 300 NVSEVVKD 307



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 50/175 (28%), Gaps = 15/175 (8%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI------EPNLGINC 234
           D    L   D+ D     L A +  +    D    D  + + +         E       
Sbjct: 389 DGDLLLFAADKADIVAASLGALRNKLGKDLDLINEDELAFLWVTDWPLFEYDEEAGRYVS 448

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
                  P  E        +     + +++     E+      +     Q   F      
Sbjct: 449 AHHPFTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------ 502

Query: 295 KKKI--YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +                +  L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 503 RALGFTDESAKEQFGFLMEALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|26350423|dbj|BAC38851.1| unnamed protein product [Mus musculus]
          Length = 236

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 12/112 (10%)

Query: 240 RYPAPESALANIY----PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            +P      ++I+      +    + ++L     E+      + D   QR+  E  ++  
Sbjct: 83  HHPFTAPNSSDIHLLYTEPEKVRGQHYDLVLNGNEIGGGSVRIHDAQLQRYILETLLK-- 140

Query: 296 KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                E   +    L  L    P   GIA+G DRLV LVTGA +I +VI  P
Sbjct: 141 -----EDVKLLSHLLQALDYGAPPHGGIALGLDRLVCLVTGAPSIRDVIAFP 187


>gi|116618407|ref|YP_818778.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122271393|sp|Q03WL7|SYD_LEUMM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116097254|gb|ABJ62405.1| aspartyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 591

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 17/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R+ I SS   +   + FI I++  L   +P     ++            
Sbjct: 133 RRPEMQKNLRIRSKIMSSAMHFMDTHDFINIETPVLAKSTPEGARDYLVPSRVFPGSFYA 192

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ F  A A+R+ +     QPEFT ++   +  +   
Sbjct: 193 LPQ------SPQLFKQLLMGAGFDRYFQIARAFRDEDLRGDRQPEFTQMDVETSFMT--- 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                 + IR       + +           +E   +T  E+  R+   D        + 
Sbjct: 244 -----ADEIRELVNAWVKAMMHDVVDFDLDTAEIPTLTWQESMDRF-GTDKPDLRIAYEI 297

Query: 192 PD 193
            D
Sbjct: 298 KD 299



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 52/158 (32%), Gaps = 14/158 (8%)

Query: 196 LLYLQAQQAG-IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           L    A+    I   +   ++ I    L E  E              P  E         
Sbjct: 409 LRRETAKALDLIDQTNPWAFAWIVDWPLFEYSEDFDRWIAAHHPFTMPNEEDLHYLNDGE 468

Query: 255 DPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY---NETYPIDEDF 309
           DP     + ++L     EL +    +        R + + +  K +     + +      
Sbjct: 469 DPHKAHAQSYDLVLNGYELGSGSIRIH-------RMDIQEKMLKALGFTPEKAHEAFGFL 521

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L  +    P   GIA+G DRL ML+ G  NI EVI  P
Sbjct: 522 LEGMEYGFPPMGGIALGLDRLAMLLAGQENIREVIAFP 559


>gi|294643423|ref|ZP_06721241.1| aspartate--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|292641237|gb|EFF59437.1| aspartate--tRNA ligase [Bacteroides ovatus SD CC 2a]
          Length = 560

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 69/199 (34%), Gaps = 20/199 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RR   R  L  R+ +   +R+Y     FIE+++  L          R F     +    
Sbjct: 131 LRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVL--IGSTPEGARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQEDI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +       +            + ++ A+A  +Y   D           
Sbjct: 247 ITTFEGMAKHLFKTLRGVELN---------EPFQRMSWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFSVFDN 312



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + D   Q   FE           E       FL    
Sbjct: 465 AAVRADAYDMVINGVEVGGGSIRIHDAKLQAKMFEIL-----GFTPEKAEAQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|149186863|ref|ZP_01865173.1| aspartyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148829530|gb|EDL47971.1| aspartyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 618

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 53/157 (33%), Gaps = 11/157 (7%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A++ G+       +  I    + E  E    ++        P  E               
Sbjct: 416 AEELGLIEEGCFKFCWIVDFPMFEYDEDAKRVDFSHNPFSMPQGEMEALETKDPLDILAW 475

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EM 316
           ++++     EL +       P      FE         Y++   +D +F   +       
Sbjct: 476 QYDIVCNGYELSSGAIRNHRPDIMYKAFEI------AGYSQA-DVDANFSGMIEAFKLGA 528

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G A G DR+VML+    NI EVI  P +Q  Q+
Sbjct: 529 PPHGGSAPGIDRIVMLLADEPNIREVIAFPLNQKAQD 565



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 14/167 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              R    ++ RN + +SLR    +  F E  +  L   SP     ++            
Sbjct: 134 RRERVHKNIMLRNRVITSLRRRMTDQGFSEFQTPILGASSPEGARDYLVPSRLHPGRFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      +P+   + L+ AG ++ F  A  +R+ +      PEF  L++  +  + E 
Sbjct: 194 LPQ------APQMFKQLLMVAGFDRYFQIAPCFRDEDLRADRSPEFYQLDFEMSFVTQED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           + +    ++    E               P  E   I  AE+  +Y 
Sbjct: 248 VFQAIEPVLAGVFEEFAD------GKTVTPAGEFPRIPYAESMLKYG 288


>gi|116193069|ref|XP_001222347.1| hypothetical protein CHGG_06252 [Chaetomium globosum CBS 148.51]
 gi|88182165|gb|EAQ89633.1| hypothetical protein CHGG_06252 [Chaetomium globosum CBS 148.51]
          Length = 551

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 97/297 (32%), Gaps = 35/297 (11%)

Query: 21  FLLKRNMIQSSL-----------REYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ 69
            + KR+ +Q ++           R Y   + F E +   L  +  +E     F       
Sbjct: 255 VMHKRSAVQQAIADIRGEMKELYRSYLRSHGFKEFEPPCLI-AAASEGGANVFRMP---- 309

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHES 128
            +  K  +L  SP+F  +  +A G +++F     +R        H  EFT L+     + 
Sbjct: 310 -YFEKEAFLAQSPQFYKQIEIAGGRKRVFSVGPVFRAENSNTPRHMTEFTGLDMEMEIKD 368

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
             + +   +  +        Q+    +          E          +   + G  +  
Sbjct: 369 DYREVVHVLEGVLFHIFRNIQERCPEEIALVRSVYPSE---------EFLLPEPGKEVRL 419

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                + LL  +  +    V  D+  S    + L   I      +   +LD++P      
Sbjct: 420 TFAEGQKLLREEGPEEFRNVTDDEDMSTPQEKALGAIIRKKYNTD-FYVLDKFPEGARPF 478

Query: 249 ANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                P + + T  ++L+    E+C+    + DP+E   R       + K  +   P
Sbjct: 479 YAKEDPTNRKVTNAYDLFMRGQEICSGGQRIHDPVELEAR------IRTKGIDPASP 529


>gi|190570818|ref|YP_001975176.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|238064674|sp|B3CPJ5|SYD_WOLPP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|190357090|emb|CAQ54495.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 600

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 18/173 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + R  ++ R+ I S LR   +E  F++I +  L   SP     ++            
Sbjct: 146 RREKVRNNIILRSQIISELRRLMIEQGFLDIQTPILTASSPEGARDYLVPSRLNPGKFYA 205

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  + E
Sbjct: 206 LPQ------APQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMSFVTQE 259

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            + +   + +       ++K                 IT  EA  +Y +    
Sbjct: 260 DIFQVIESTLYKVFAKFSRKSVDKD---------FPRITYKEAMLKYGSDKPD 303



 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 57/201 (28%), Gaps = 18/201 (8%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ-------QAGIRVAHDDTWSD 216
           +        +     N+  G ++      +     +  +       + G+       +  
Sbjct: 384 KFLDDNRLNSIKEITNVKPGDSVFFASDKENEAATIAGKVRTLLGSELGLIDDDIFKFCW 443

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           I         + +  I+        P                  +++L    IEL +   
Sbjct: 444 IIDFPYFVYDDKSKKIDFFHNPFSMPHGGLKDLEEKDPLDILAYQYDLVCNGIELSSGAI 503

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVML 332
                      F      K+        +D  F   +       P   GIA G DR+VML
Sbjct: 504 RNNKLNIMYRAFAIAGYSKE-------EVDTKFGALVRAFRFGAPPHGGIAPGVDRMVML 556

Query: 333 VTGANNINEVIWTPFSQSNQE 353
           +    NI EVI  P +Q  ++
Sbjct: 557 LADEPNIREVICFPMNQQGED 577


>gi|71083425|ref|YP_266144.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|97196785|sp|Q4FMP8|SYD_PELUB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71062538|gb|AAZ21541.1| asparaginyl-tRNA synthetase [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 594

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 63/174 (36%), Gaps = 20/174 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR+     ++ R+ + S +R    +  F+E  +  L   SP      R F     +   
Sbjct: 133 LRRKKIHDNIILRSKVISFIRSEMSKLGFLEFQTPILTSSSPEG---ARDFLVPSRLN-- 187

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESY 129
                Y L  +P+   + ++ +G +K F  A  +R+ +      P EF  L+   +    
Sbjct: 188 -PGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMSFVEQ 246

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           E + +    +I    +  ++K           + +   I   E+  +Y +    
Sbjct: 247 EDVFQVVEKLIVNVFKKFSEKKL--------MYEKFPRIPYEESMLKYGSDKPD 292



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 13/160 (8%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPADPR 257
             A+   +   +   +  +    + EK E    I         P      +    P +  
Sbjct: 418 KIAKDLKLIDENTFAFCWVVDYPMFEKNEVTNKIEFSHNPFSMPQGDLKDIDFDNPLNI- 476

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL- 313
              ++++    IEL +       P      F     +K++       +DE F   +  L 
Sbjct: 477 KAYQYDIVCNGIELSSGAIRNHVPELMYKLFSIAGYQKEQ-------VDEKFSGMINALS 529

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI EV   P +Q+ Q+
Sbjct: 530 YGAPPHGGIAPGIDRIVMLLANEKNIREVTMFPMNQNAQD 569


>gi|71893591|ref|YP_279037.1| aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 561

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 66/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L  R  I   +R +  +N FIEI++  L   +P      R+F      +   
Sbjct: 117 RRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEG---ARSFLVPTRQKGKF 173

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +  EK F FA  +R+ +     Q EF  L+      ++E++
Sbjct: 174 ---FALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDRQFEFLQLDLEFGFPTFEKI 230

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            ++   +IR            +  +  N   +   +T  EA   Y   D           
Sbjct: 231 SEEIEALIRDL----------WTKIFPNLAIDFPKLTYFEAIKNY-GTDKPDLRFETKLF 279

Query: 193 DRHLLYLQ 200
           D   L   
Sbjct: 280 DLDFLNDI 287



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 12/157 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L  L A++  +       ++ I +  L E    N   +                +  P 
Sbjct: 382 ALRNLVAKKYKLINEDQFKFAWIINWPLFELDINNKLTSAHHPFTAPTLESQQFLHKNPL 441

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                + ++L     EL +    + +   Q+  F         +  +   I   F   L 
Sbjct: 442 KV-QAQAYDLVLNGFELGSGSIRIHNAELQKQVFTI-------LGLDQDQIHTQFGALLR 493

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                +P   G A G DRL+M++   N+I +VI  P 
Sbjct: 494 AFNYGVPPHGGFAFGLDRLIMILRKTNSIRDVIAFPV 530


>gi|332670527|ref|YP_004453535.1| aspartyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332339565|gb|AEE46148.1| aspartyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 591

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 39/109 (35%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       +++     E+      +     Q   FE         
Sbjct: 449 FTSPTPQWIDTFEQDPGNALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFEVMGI----G 504

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G+DR+V L+TGA +I EVI  P
Sbjct: 505 PEEAQEKFGFLLDAFQFGAPPHGGIAFGWDRIVALLTGAESIREVIAFP 553



 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 64/179 (35%), Gaps = 21/179 (11%)

Query: 11  NRDFHYR-RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +   RRP     L  R     + R       F+E+++ +L   +P      R F  
Sbjct: 122 LKHRYLDLRRPAPARALRLRAKASQAARAVLDAQDFVEVETPTLTRSTPEG---ARDFLV 178

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   
Sbjct: 179 PARLS--PGSWYALPQSPQLFKQLLMVAGLERYYQIARCYRDEDFRADRQPEFTQLDVEM 236

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +    + ++     I+     +           +    +    +T A+A ARY +    
Sbjct: 237 SFVEQDDVIALGEQILVALWRLV----------DVEIPTPIRRMTFADAMARYGSDKPD 285


>gi|312601217|gb|ADQ90472.1| Aspartyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 567

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 66/188 (35%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  L  R  I   +R +  +N FIEI++  L   +P      R+F      +   
Sbjct: 123 RRQIMKENLTFRYKIFHYIRCFLYKNNFIEIETPILSKSTPEG---ARSFLVPTRQKGKF 179

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +  EK F FA  +R+ +     Q EF  L+      ++E++
Sbjct: 180 ---FALPQSPQIYKQLLMVSAFEKYFQFARVFRDEDLRKDRQFEFLQLDLEFGFPTFEKI 236

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
            ++   +IR            +  +  N   +   +T  EA   Y   D           
Sbjct: 237 SEEIEALIRDL----------WTKIFPNLVIDFPKLTYFEAIKNY-GTDKPDLRFETKLF 285

Query: 193 DRHLLYLQ 200
           D   L   
Sbjct: 286 DLDFLNDI 293



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 12/157 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L  L A++  +       ++ I +  L E    N   +                +  P 
Sbjct: 388 ALRNLVAKKYKLINEDQFKFAWIINWPLFELDINNKLTSAHHPFTAPTLESQQFLHKNPL 447

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                + ++L     EL +    + +   Q+  F         +  +   I   F   L 
Sbjct: 448 KV-QAQAYDLVLNGFELGSGSIRIHNVELQKQVFTI-------LGLDQDQIHTQFGALLR 499

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                +P   G A G DRL+M++   N+I +VI  P 
Sbjct: 500 AFNYGVPPHGGFAFGLDRLIMILRKTNSIRDVIAFPV 536


>gi|209964841|ref|YP_002297756.1| aspartyl-tRNA synthetase AspS [Rhodospirillum centenum SW]
 gi|238064672|sp|B6IN46|SYD_RHOCS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|209958307|gb|ACI98943.1| aspartyl-tRNA synthetase AspS [Rhodospirillum centenum SW]
          Length = 601

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 61/172 (35%), Gaps = 10/172 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  ++ R+ + +S+R   +E  F E  +  L   SP      R F       +H 
Sbjct: 134 RREKMQRNMVLRSNVIASVRRRMIEQGFTEFQTPILTASSPEG---ARDFLVPAR--NHP 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L++  +  + + 
Sbjct: 189 GKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDFEMSFVTQDD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +      +I    E  +                   I   EA  +Y +    
Sbjct: 249 VFAAIEPVIHGIFEEFSG---FTGVKKSVSPYPFVRIPFDEAMLKYGSDKPD 297



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 50/161 (31%), Gaps = 15/161 (9%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A Q  +       +  I    + E  E    I+        P                
Sbjct: 420 EIATQLDLIAKDRFEFCWIVDFPMYEYDEERKKIDFSHNPFSMPQGGLEALETQDPLTIK 479

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLAC 312
             ++++    +EL +       P      FE      ++++ K       + +       
Sbjct: 480 AFQYDIVCNGVELSSGAIRNHRPEIMYKAFEIAGYAAEDLEAKFGGMLSAFKL------- 532

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 533 --GAPPHGGSAPGIDRMVMLLADEPNIREVILFPLNQRAED 571


>gi|91762152|ref|ZP_01264117.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717954|gb|EAS84604.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 594

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 13/160 (8%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPADPR 257
             A+   +   +   +  +    + EK E    I         P      +    P +  
Sbjct: 418 KIAKDLKLIDENTFAFCWVVDYPMFEKNEVTNKIEFSHNPFSMPQGDLKDIDFDNPLNI- 476

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL- 313
              ++++    IEL +       P      F     +K++       +DE F   +  L 
Sbjct: 477 KAYQYDIVCNGIELSSGAIRNHVPELMYKLFSIAGYQKEQ-------VDEKFSGMINALS 529

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI EV   P +Q+ Q+
Sbjct: 530 YGAPPHGGIAPGIDRIVMLLANEKNIREVTMFPMNQNAQD 569



 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 63/174 (36%), Gaps = 20/174 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR+     ++ R+ + S +R    +  F+E  +  L   SP      R F     +   
Sbjct: 133 LRRKNIHDNIILRSKVISFIRGEMSKLGFLEFQTPILTSSSPEG---ARDFLVPSRLN-- 187

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESY 129
                Y L  +P+   + ++ +G +K F  A  +R+ +      P EF  L+   +    
Sbjct: 188 -PGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMSFVEQ 246

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           E + +    +I    +  ++K           + +   I   E+  +Y +    
Sbjct: 247 EDVFQVVEKLIVNVFKKFSEKKL--------MYEKFPRIPYEESMLKYGSDKPD 292


>gi|330823547|ref|YP_004386850.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329308919|gb|AEB83334.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 599

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 42/138 (30%), Gaps = 5/138 (3%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +    + E  E              P                 K +++     EL     
Sbjct: 437 VVDFPMFEHDEDEDRWVAVHHPFTSPKDGHEDLMDTDPGKCIAKAYDMVLNGWELGGGSV 496

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTG 335
            +     Q   F       K    +        L  L    P   G+A G DRL+ L+TG
Sbjct: 497 RIHRADVQSKVF----SALKIGPEDARAKFGYLLDALQYGAPPHGGLAFGLDRLITLMTG 552

Query: 336 ANNINEVIWTPFSQSNQE 353
           A +I +VI  P +Q  Q+
Sbjct: 553 AESIRDVIAFPKTQRAQD 570



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 66/184 (35%), Gaps = 20/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R      +R +  +  F++I++  L + +P     ++            
Sbjct: 133 RRPAMQRNLMLRYKTAIQVRNFLDKEGFVDIETPMLGKSTPEGARDYLVPSRVHD----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 188 -GQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEEE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +I              +        E   +  AEA  R+ +   DL   L+  
Sbjct: 247 IRAIFQRMIVEVF----------KQQLDVDLGEFPTMAYAEAMHRFGSDKPDLRVKLEFT 296

Query: 190 DQPD 193
           +  D
Sbjct: 297 ELTD 300


>gi|319761676|ref|YP_004125613.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317116237|gb|ADU98725.1| aspartyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 599

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 42/138 (30%), Gaps = 5/138 (3%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +    + E  E              P                 K +++     EL     
Sbjct: 437 VVDFPMFEHDEDEDRWVAVHHPFTSPKDGHEDLMDTDPGKCIAKAYDMVLNGWELGGGSV 496

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTG 335
            +     Q   F       K    +        L  L    P   G+A G DRL+ L+TG
Sbjct: 497 RIHRADVQSKVF----SALKIGPEDARAKFGYLLDALQYGAPPHGGLAFGLDRLITLMTG 552

Query: 336 ANNINEVIWTPFSQSNQE 353
           A +I +VI  P +Q  Q+
Sbjct: 553 AESIRDVIAFPKTQRAQD 570



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 66/184 (35%), Gaps = 20/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R      +R +  +  F++I++  L + +P     ++            
Sbjct: 133 RRPAMQRNLMLRYKTAIQVRNFLDKEGFVDIETPMLGKSTPEGARDYLVPSRVHD----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  + E+
Sbjct: 188 -GQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLNEEE 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
           +      +I              +        E   +  AEA  R+ +   DL   L+  
Sbjct: 247 IRAIFQRMIVEVF----------KQQLDVDLGEFPTMAYAEAMHRFGSDKPDLRVKLEFT 296

Query: 190 DQPD 193
           +  D
Sbjct: 297 ELTD 300


>gi|265763994|ref|ZP_06092562.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263256602|gb|EEZ27948.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 585

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 18/187 (9%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R Y  +  F+E+++  L   +P      R F     +   
Sbjct: 131 LRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +V           N         +  +EA   Y +            
Sbjct: 246 VITTFEGMAKHLFKVI---------RNIELTEPFPRMPWSEAMRLYGSDKPDIRFGMQFV 296

Query: 192 PDRHLLY 198
               +L 
Sbjct: 297 ELMDILK 303



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    L E  E    +         P PE         
Sbjct: 405 ELRLEMGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    +E+      + D   Q   FE           E         +   
Sbjct: 465 AAVRANAYDMVINGVEVGGGSIRIHDSQLQNKMFE-----LLGFTPERAQEQFGFLMNAF 519

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KFGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|27369928|ref|NP_766232.1| aspartyl-tRNA synthetase, mitochondrial precursor [Mus musculus]
 gi|81913222|sp|Q8BIP0|SYDM_MOUSE RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|26332118|dbj|BAC29789.1| unnamed protein product [Mus musculus]
 gi|50370336|gb|AAH76606.1| Aspartyl-tRNA synthetase 2 (mitochondrial) [Mus musculus]
 gi|74218347|dbj|BAE23785.1| unnamed protein product [Mus musculus]
 gi|148707385|gb|EDL39332.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_d [Mus
           musculus]
          Length = 653

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 12/112 (10%)

Query: 240 RYPAPESALANIY----PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            +P      ++I+      +    + ++L     E+      + D   QR+  E  ++  
Sbjct: 500 HHPFTAPNSSDIHLLYTEPEKVRGQHYDLVLNGNEIGGGSVRIHDAQLQRYILETLLK-- 557

Query: 296 KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                E   +    L  L    P   GIA+G DRLV LVTGA +I +VI  P
Sbjct: 558 -----EDVKLLSHLLQALDYGAPPHGGIALGLDRLVCLVTGAPSIRDVIAFP 604



 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 186 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGKF---YSLP 239

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      + +    +
Sbjct: 240 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVEQTGIQRLVEGL 299

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+        +    +T AEA A Y   D   T       D
Sbjct: 300 LQY----------SWPGDKDPLVTPFPSMTFAEALATY-GTDKPDTRFGMKIVD 342


>gi|317477028|ref|ZP_07936270.1| aspartyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316906821|gb|EFV28533.1| aspartyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 585

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R+Y     FIE+++  L   +P      R F     +    
Sbjct: 132 RRATVRKNLELRHKMTIEVRKYLDSKGFIEVETPLLIGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +       
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFV----Q 242

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
             D + +    A+   ++I   +                    +Y   D           
Sbjct: 243 QDDVIELFEGMAKYLFKEIRGVELTEPFQRMPWA------NAMKYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFSVFDN 312



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      I    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGNQLGLRDKNKFALLWIVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTNP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    IE+      + D   Q   FE           E       FL    
Sbjct: 465 AAVRADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEIL-----GFTPEKAEEQFGFLMNAF 519

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V +  G ++I + I  P
Sbjct: 520 KFGAPPHGGLAYGLDRWVSIFAGLDSIRDCIAFP 553


>gi|225620713|ref|YP_002721971.1| aspartyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254781719|sp|C0R2C9|SYD_BRAHW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225215533|gb|ACN84267.1| aspartyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 586

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 79/221 (35%), Gaps = 13/221 (5%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP     L KR  I ++ R++  +N FI++++  L   +P      R F     +    
Sbjct: 135 RRPTVFNNLYKRFQITNAFRKHLSDNGFIDVETPILNKSTPEG---ARDFLVPSRLNAG- 190

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G ++ +  A  +R+ +     QPEFT ++   +  + ++
Sbjct: 191 --DFYALPQSPQIFKQILMIGGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLNTDE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            +    N+     +              N +   E     +   R+  + L    D    
Sbjct: 249 FLSIMENVTANIVKDVYGIDLPTPFPRLNYYDAMEMYGSDKPDTRF-ELKLINVEDAVRG 307

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
            D  +         I    +    +  SR  I+     +GI
Sbjct: 308 CDFAVFKNALDNKFIIRCLNAKGGEKLSRKDIDDFTKYVGI 348



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 56/362 (15%), Positives = 102/362 (28%), Gaps = 36/362 (9%)

Query: 9   WWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN---ETHIRAFSTE 65
           + + D    R+P    +  I++S   +   ++F+      ++    N   + +     T 
Sbjct: 221 FRDEDLRADRQPEF-TQVDIETS---FLNTDEFL----SIMENVTANIVKDVYGIDLPTP 272

Query: 66  LIIQDHIR-KPLYLQTSP----EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
               ++     +Y    P    E     +  A     F       + +            
Sbjct: 273 FPRLNYYDAMEMYGSDKPDTRFELKLINVEDAVRGCDFAVFKNALDNKFIIRCLNAKGGE 332

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +  R                  A      K      V    FSE     + E        
Sbjct: 333 KLSRKDIDDFTKYVGIFGAKGLAWMRVTDKGLESNIVK--FFSEENQKKILEVTKAEKGD 390

Query: 181 DLGTTLDNPDQPDRHLLYLQ---AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
            L    D P      L  L+   A++  +       +  +    L E       I+    
Sbjct: 391 LLFFVADTPKVTFDALGNLRLRVAEKLNLIDKDKLNFLWVVEFPLFEYDHKEKRISATHH 450

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQ 293
               P PE             +  ++L     E+      + D   Q   F+     E +
Sbjct: 451 PFTAPVPEDVAILESEPLKVRSDTYDLVLNGNEIGGGGQRIYDSKVQAIIFKLLGIDEEK 510

Query: 294 EKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            K +            L  L    P   G+A G DR+VML+   ++I EVI  P  ++ +
Sbjct: 511 AKLRFG--------FLLDALKYGAPPMCGMAYGIDRVVMLLQKQDSIREVIAFP--KTQK 560

Query: 353 EE 354
            +
Sbjct: 561 GQ 562


>gi|153806333|ref|ZP_01959001.1| hypothetical protein BACCAC_00592 [Bacteroides caccae ATCC 43185]
 gi|149131010|gb|EDM22216.1| hypothetical protein BACCAC_00592 [Bacteroides caccae ATCC 43185]
          Length = 587

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 70/200 (35%), Gaps = 22/200 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   R  L  R+ +   +R Y  +  FIE+++  L   +P      R F     +   
Sbjct: 131 LRRNAVRSNLELRHKMTIEVRTYLDKLGFIEVETPVLIGSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E 
Sbjct: 186 PGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + +   +       +              ++ A+A  +Y   D          
Sbjct: 246 IIATFEGMAKHLFKTLRGVELT---------EPFLRMSWADAM-KYYGSDKPDLRFGMKF 295

Query: 192 PDRHLLYLQAQQAGIRVAHD 211
            +   L    +  G  V  +
Sbjct: 296 VE---LMDIMKGHGFSVFDN 312



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGSQLGLRDKNKFACLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + D   Q   FE           E       FL    
Sbjct: 465 AAVRADAYDMVINGVEVGGGSIRIHDAQLQAKMFEIL-----GFTPEKAQAQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|16800622|ref|NP_470890.1| aspartyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|24212412|sp|Q92BJ4|SYD_LISIN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|16414041|emb|CAC96785.1| aspartyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 591

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 60/188 (31%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299

Query: 192 PDRHLLYL 199
               ++  
Sbjct: 300 NVSEVVKD 307



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 53/191 (27%), Gaps = 15/191 (7%)

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
                 AE  A     D    L   D+ D     L A +  +    D    D  + + + 
Sbjct: 373 FPEDKAAELQAALQAEDGDLLLFAADKADIVAASLGALRNKLGKDLDLINEDELAFLWVT 432

Query: 225 KI------EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
                   E              P  E        +     + +++     E+      +
Sbjct: 433 DWPLFEYDEEAGRYVSAHHPFTLPKEEDIPFLETDSSKVMAEAYDIVLNGYEIGGGSLRI 492

Query: 279 LDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
                Q   F      +                +  L    P   GIA+G DR+VM++ G
Sbjct: 493 YKKEVQESMF------RALGFTDESAKEQFGFLMEALEYGTPPHGGIALGLDRIVMILAG 546

Query: 336 ANNINEVIWTP 346
            NN+ + I  P
Sbjct: 547 RNNLRDTIAFP 557


>gi|330813925|ref|YP_004358164.1| aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase
           unambiguous [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487020|gb|AEA81425.1| aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase
           unambiguous [Candidatus Pelagibacter sp. IMCC9063]
          Length = 547

 Score = 94.3 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 68/203 (33%), Gaps = 22/203 (10%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR+     ++ R+ + S +R+   +  F+E  +  L   SP      R F     +   
Sbjct: 87  LRRKKIHQNIILRSKVISFIRDKMSQLGFLEFQTPILTASSPEG---ARDFLVPSRLN-- 141

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESY 129
                Y L  +P+   + ++ AG +K F  A  +R+ +      P EF  L+   +    
Sbjct: 142 -PGKFYALPQAPQQFKQLIMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDIEMSFV-- 198

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--NIDLGTTLD 187
                     I    E     +FS  +           I+  +A  +Y     DL   L 
Sbjct: 199 ------EQEDIFTILEKLMNDVFSQFSKKKVISKVFPRISYDDALLKYGTDKPDLRNPLM 252

Query: 188 NPDQPDRHLLYLQAQQAGIRVAH 210
             D  D  L      +   ++  
Sbjct: 253 IYDTTDLFLSEEVKFEIFKKLIK 275



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 5/156 (3%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A +  +   +   +  I    + E+      I+        P  +    +        
Sbjct: 373 KIANELKLIDENTFAFCWIVDYPMFEQDPATNKIDFSHNPFSMPQGKMENIDFNNPLNIK 432

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
             ++++    IEL +       P      F      K ++ ++   +    +  L    P
Sbjct: 433 AYQYDIVCNGIELSSGAIRNHKPELMYKLFGIAGYSKDQVDDKFSGM----INALSYGAP 488

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              GIA G DR+VML+    NI EV   P +Q  Q+
Sbjct: 489 PHGGIAPGLDRIVMLLADEKNIREVTMFPMNQGAQD 524


>gi|255327172|ref|ZP_05368247.1| aspartate--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295790|gb|EET75132.1| aspartate--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 590

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 27/198 (13%)

Query: 13  DFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R+    + R    E+ +IE+++ +L   +P      R 
Sbjct: 117 EARLRYRYLDLRRPEPARIMRLRSDANRAARNLLAEDGYIEVETPTLTRSTPEG---ARD 173

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L   G EK +  A  +R+ +     QPEFT L+
Sbjct: 174 FLVPARL--APGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQPEFTQLD 231

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    E +++    I+             +  ++       + +T  +A  +Y   D
Sbjct: 232 IEASFVDQEDIIELGERIVEA----------VWNLIDVKVPRPIQRMTYKDAMEKY-GTD 280

Query: 182 LGTTLDNPDQPDRHLLYL 199
                   +  +    + 
Sbjct: 281 KPDLRFGLELTELTEYFK 298



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P+    + +  DP       +++     E+      +     Q   F          
Sbjct: 450 FTSPKPEFLDTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVF----AVMGIG 505

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G+DR+V L+ G ++I EVI  P
Sbjct: 506 EEEAQEKFGFLLDAFKYGAPPMGGIAFGWDRIVSLLAGVDSIREVIAFP 554


>gi|254421112|ref|ZP_05034836.1| aspartyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196187289|gb|EDX82265.1| aspartyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 610

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 64/182 (35%), Gaps = 18/182 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + SS+R+  V   F+E  +  L   SP      R F     +    
Sbjct: 134 RRERLHKNIVLRSRVISSIRQRMVGQGFLEYQTPILTASSPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  +P+   + L+ +G ++ F  A  +R+ +       EF  L+   +  + E 
Sbjct: 188 PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSLEFYQLDVEMSFVTQED 247

Query: 132 LMKDCMNIIRCAAEVANQ----------KIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
           +      ++    E   +           +F+            E +T A++ A Y +  
Sbjct: 248 VFAAIEPLMHGVFEEFGEGKPVSPIDGVHVFTNDFGETFEHKGFERLTYAQSMAWYGSDK 307

Query: 182 LG 183
             
Sbjct: 308 PD 309



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 50/155 (32%), Gaps = 11/155 (7%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +  +   +   +  I    + E  E    ++        P                  ++
Sbjct: 436 ELKLIDENQFKFCWIVDFPMFEWSEEEKKVDFSHNPFSMPQGGLEALETQDPLTIRAFQY 495

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQ 318
           ++     ELC+              FE         Y+    ++E F   L       P 
Sbjct: 496 DIVCNGYELCSGAIRNHKAEIMLKAFEI------AGYD-ASVVEEQFGGMLNAFRYGAPP 548

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G+A G DR+VML+ G   I EVI  P +Q  ++
Sbjct: 549 HGGLAPGIDRIVMLLAGETAIREVIAFPLNQQGED 583


>gi|170086982|ref|XP_001874714.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649914|gb|EDR14155.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 646

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 76/257 (29%), Gaps = 25/257 (9%)

Query: 2   HQIPSQPWWNRDFHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGN 55
           H +P++   +R  +   RR  L     KR+ +   +R       F E+++   L+ SP  
Sbjct: 149 HNLPNEDLRSRHRYLDLRRTALSENIKKRSQVAHLVRNILHTIGFTEVETPVLLRSSPEG 208

Query: 56  ET-HIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLA-AGEEKIFCFAHAWRNGEQGCL 112
               +                 Y LQ SP+   + L+   G +K F  A  +R+ +    
Sbjct: 209 AREFLVPTRINTASPTSQEPLFYALQQSPQQPKQLLICSGGVDKYFQIAKCFRDEDGRKD 268

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNII---RCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
            QPEFT ++   A  S+    K     I        +       +Q            + 
Sbjct: 269 RQPEFTQIDLEMAFVSWSGDEKGTSWKIGGGEVRDVIETLLREIWQQFENVALPPRLRVM 328

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI--E 227
                  +   D   T    +  D   L    +                + ++   +  E
Sbjct: 329 TYHDAMTHFGSDKPDTRFGLEITDLTDLLPANRALSRE-----------NEVIECIVVRE 377

Query: 228 PNLGINCCTILDRYPAP 244
           P       +    Y   
Sbjct: 378 PEFIKASHSFKHDYDVE 394



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           + ++L    +E+      + DP+ Q H F   +Q  +   NE  P     +  L    P 
Sbjct: 531 QHYDLVLNGVEIGGGSVRIHDPLMQDHIFTNVLQLSE---NEKTPF-NHLVRALHCGAPP 586

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             GIA+GFDR++ ++    +I +VI  P
Sbjct: 587 HGGIALGFDRIMTMLCNTQSIRDVIAFP 614


>gi|255691887|ref|ZP_05415562.1| aspartate--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260622440|gb|EEX45311.1| aspartate--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 585

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 20/199 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RR   R  L  R+ +   +R+Y     FIE+++  L          R F     +    
Sbjct: 131 LRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVL--IGSTPEGARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQEDI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +       +              +  A+A  +Y   D           
Sbjct: 247 ITTFEGMAKHLFKTLRGVELT---------EPFPRMAWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFSVFDN 312



 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGSQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + D   Q   FE           E       FL    
Sbjct: 465 AAVRADAYDMVVNGVEVGGGSIRIHDAKLQAKMFEIL-----GFTPEKAEAQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|58699434|ref|ZP_00374182.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534048|gb|EAL58299.1| aspartyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 257

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 63/173 (36%), Gaps = 18/173 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              + R  ++ R+ I + LR+  +E  F+EI +  L   SP     ++            
Sbjct: 58  RREKVRNNIILRSQIIAELRKLMIERGFLEIQTPILTASSPEGARDYLVPSRLNPGKFYA 117

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  + E
Sbjct: 118 LPQ------APQIFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMSFVTQE 171

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            + +   + +       ++K                 IT  EA  +Y +    
Sbjct: 172 DIFQIIESTLYRVFAKFSRKSVDKD---------FPRITYKEAMLKYGSDKPD 215


>gi|284039033|ref|YP_003388963.1| aspartyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283818326|gb|ADB40164.1| aspartyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 589

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 64/183 (34%), Gaps = 12/183 (6%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR P    L  R+ +    R Y     FIE+++  L   +P      R F     +   
Sbjct: 132 LRRNPVRKSLELRHRMAQQTRVYMDGQDFIEVETPVLIKSTPEG---ARDFVVPSRMN-- 186

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ +G ++ +     +R+ +     QPEFT ++   +    E
Sbjct: 187 -PGEFYALPQSPQTFKQLLMVSGFDRYYQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQE 245

Query: 131 QLMKDCMNIIRCAAEVANQ-KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            ++     ++R   +      + S   +      +       +       ++L  T D  
Sbjct: 246 DILNMFEGLVRHLFKTVKGIDMASVPRMTYADAMKFYGSDKPDTRFGMEFVELKGTFDTV 305

Query: 190 DQP 192
           D  
Sbjct: 306 DMT 308



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 44/153 (28%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      + G+R  +  +   +    L+E  E              P PE         
Sbjct: 410 ELRLEMGSRLGLRDPNVFSTLWVLDFPLLEFGEEENRWFAMHHPFTSPKPEDIPLLDTDL 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                  ++L     E+      + +   Q   F            E        +    
Sbjct: 470 GAVRANAYDLVINGTEVGGGSIRIFNRDLQARMF----SILGFSDEEAKAQFGFLMDAFE 525

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA GFDRL  L  GA++I + I  P
Sbjct: 526 FGAPPHGGIAFGFDRLCSLFGGADSIRDFIAFP 558


>gi|116872948|ref|YP_849729.1| aspartyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123466329|sp|A0AIW8|SYD_LISW6 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116741826|emb|CAK20950.1| aspartyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 591

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEK 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A                    +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLIDVVKEAKGITIE---------KPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299

Query: 192 PDRHLLYL 199
               ++  
Sbjct: 300 NVSEVVKD 307



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 15/175 (8%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI------EPNLGINC 234
           D    L   D+ D     L A +  +    +    D  + + +         E       
Sbjct: 389 DGDLLLFAADKADIVAASLGALRNKLGKDLNLINEDELAFLWVTDWPLFEYDEEAGRYVS 448

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
                  P  E        +     + +++     E+      +     Q   F      
Sbjct: 449 AHHPFTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------ 502

Query: 295 KKKI--YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +                +  L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 503 RALGFTDESAKEQFGFLMDALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|294789544|ref|ZP_06754779.1| aspartate--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482481|gb|EFG30173.1| aspartate--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 602

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 63/197 (31%), Gaps = 10/197 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L  R  +   +R Y     FI+I++  L   +P     ++            
Sbjct: 131 RRPYMQRNLKLRYQVAMGVRRYLDVQGFIDIETPMLTRSTPEGARDYLVPSRVHAGEFFA 190

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  +  +
Sbjct: 191 LPQ------SPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDLETSFLTENE 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M     + +   + A               +   Y +  +      ++      D    
Sbjct: 245 IMDITEGMAKQVFKDALGVDLGDFPRMQYSDAMFYYGS--DKPDMRISLKFTELTDLMKT 302

Query: 192 PDRHLLYLQAQQAGIRV 208
            +  +    A     RV
Sbjct: 303 EEFKVFRGAADMKNGRV 319



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 45/156 (28%), Gaps = 8/156 (5%)

Query: 195 HLLYLQAQQAGIR---VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
            L     ++ G+       +     +    + E  E              P        +
Sbjct: 413 ALRIKIGKEHGLENGYFVDEWKPLWVVDFPMFEYDEDADRYVAVHHPFTAPKEGHEDLMV 472

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
              +    + +++     E+      +     Q   F       K    E        L 
Sbjct: 473 SAPEKCLARAYDMVLNGWEIGGGSIRIHRAEIQEKVF----AALKITPEEQQEKFGFLLD 528

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DRLV L+T A +I +VI  P
Sbjct: 529 NLKFGAPPHGGLAFGLDRLVTLMTSAESIRDVIAFP 564


>gi|67459530|ref|YP_247154.1| aspartyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536063|sp|Q4UKE2|SYD_RICFE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|67005063|gb|AAY61989.1| Aspartyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 600

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 61/195 (31%), Gaps = 18/195 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ I S +R       F E  +  L   SP      R F   
Sbjct: 128 KHRFLDLRREKLHNNIILRSQIISHIRHLMTGRGFTEFQTPILTASSPEG---ARDFLVP 184

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+  
Sbjct: 185 SRMH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  +           I    E     +F+         +    I   E+  +Y   D  
Sbjct: 242 MSFVT--------QEDIFSTIEPVMYDLFTKFTAKKVSETPFVRIPYNESMLKY-GSDKP 292

Query: 184 TTLDNPDQPDRHLLY 198
              +     D   ++
Sbjct: 293 DLRNPIIIADVTEIF 307



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP----APESALANIYPADPR 257
           ++  +       +  I      E  E    I+        P                   
Sbjct: 418 EELDLLEKDCFKFCWITDFPFYELNEDTGKIDFSHNPFSMPQGGLEALEQAKTTEELLEL 477

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT 314
              ++++    IEL +       P      F          Y+E   +D+ F   +    
Sbjct: 478 TAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSM------AGYSEE-EVDKRFGGMIRAFK 530

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 531 FGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 570


>gi|15827171|ref|NP_301434.1| aspartyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229649|ref|YP_002503065.1| aspartyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|549025|sp|P36429|SYD_MYCLE RecName: Full=Aspartyl-tRNA synthetase; AltName: Full=Antigen T5;
           AltName: Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781743|sp|B8ZUJ3|SYD_MYCLB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3335328|gb|AAC27132.1|S82268_1 aspartyl-tRNA synthetase [Mycobacterium leprae]
 gi|581332|emb|CAA54735.1| aspartyl-tRNA synthetase [Mycobacterium leprae]
 gi|3136016|emb|CAA19094.1| aspartyl-tRNA synthetase [Mycobacterium leprae]
 gi|13092719|emb|CAC30009.1| aspartyl-tRNA synthetase [Mycobacterium leprae]
 gi|219932756|emb|CAR70594.1| aspartyl-tRNA synthetase [Mycobacterium leprae Br4923]
          Length = 589

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 72/212 (33%), Gaps = 32/212 (15%)

Query: 3   QIP---SQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P    +P    +   + R            +  R+ + ++ R     + F+EI++ ++
Sbjct: 106 PLPFQLDEPAG-EELRLKYRYLDLRRDGPGSAIRLRSKVNATARAVLARHDFVEIETPTI 164

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              +P      R F     ++       Y L  SP+   + L+ AG E+ +  AH +R+ 
Sbjct: 165 TRSTPEG---ARDFLVPARLR---PGTFYALPQSPQLFKQLLMVAGMERYYQIAHCYRDE 218

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT L+   +    E ++     I+     +             +  +    
Sbjct: 219 DFRADRQPEFTQLDMEMSFVDAEDVIAISEEILTELWMLIG----------YHIPAPIPR 268

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I+ A+A  R+ +                    
Sbjct: 269 ISYADAMRRFGSDKPDLRFGLELVECTEFFCD 300



 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 8/124 (6%)

Query: 227 EPNLGINCCTILDR-YPAPESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIE 283
           E  +G    T +   + +P+    +   +DP       +++     E+ +    +     
Sbjct: 436 EMAVGSGAWTAVHHAFTSPKPEFEDSIESDPGSVLADAYDIVCNGHEIGSGSVRINRRDI 495

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q   F     EK     E        L   T   P   GIA G+DR   L+ G  +I EV
Sbjct: 496 QERVFAVMGLEKA----EAEEKFGFLLEAFTFGAPPHGGIAFGWDRTNALLAGMESIREV 551

Query: 343 IWTP 346
           I  P
Sbjct: 552 IAFP 555


>gi|189237891|ref|XP_966901.2| PREDICTED: similar to aspartyl-tRNA synthetase [Tribolium castaneum]
          Length = 1516

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 68/186 (36%), Gaps = 18/186 (9%)

Query: 22   LLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
            L  R+ +   +RE+ V +  F+++++ +L + +PG       F           +   L 
Sbjct: 1077 LRVRSEMLMKMREFLVNHSGFVDVETPTLFKATPGGAQE---FIVPTRFP---GQFYSLV 1130

Query: 80   TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
             SP+   + L+A   ++ F  A  +R+       QPEFT L+   +    + +++    +
Sbjct: 1131 QSPQQFKQMLMAGAVDRYFQIARCYRDEGARPDRQPEFTQLDIEMSFTDLDNILQLVEEL 1190

Query: 140  IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
            +  A       +            + + +   EA   Y +    T      +    LL L
Sbjct: 1191 LGHAWPPFLGPLPK----------KFQRMGFGEAMELYGSDQPDTRFGFKLENCTELLKL 1240

Query: 200  QAQQAG 205
              +   
Sbjct: 1241 NEKFIN 1246



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 56/180 (31%), Gaps = 10/180 (5%)

Query: 169  TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEKIE 227
             V++    +          +     R       +Q G+ V A       +    L E  E
Sbjct: 1314 HVSDDCVLFLGFGNKKQTQSLMGKVRLEYANHLEQLGVSVRAKGMHLLWVVDMPLFEPGE 1373

Query: 228  PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                +         P P+  L          +  F+L     E+      + DP  Q   
Sbjct: 1374 SPGSLQSAHHPFTAPNPDDLLLLDTAPLQVRSLSFDLVLNGNEIGGGSVRIHDPDLQEKI 1433

Query: 288  FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F     +K  +        +  +  L+   P   GIA+G DRL+  +    +I +VI  P
Sbjct: 1434 FRMLNIDKNSM--------QHIIDMLSSGCPPHGGIALGLDRLMSKILNTASIRDVIAFP 1485


>gi|224024024|ref|ZP_03642390.1| hypothetical protein BACCOPRO_00741 [Bacteroides coprophilus DSM
           18228]
 gi|224017246|gb|EEF75258.1| hypothetical protein BACCOPRO_00741 [Bacteroides coprophilus DSM
           18228]
          Length = 595

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 66/199 (33%), Gaps = 20/199 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RR   R  L  R+ +   +R Y     F+E+++  L          R F     +    
Sbjct: 141 LRRTAVRKNLELRHRMTMEVRRYLDGLGFLEVETPML--IGSTPEGARDFVVPSRMN--P 196

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E +
Sbjct: 197 GQFYALPQSPQTLKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDI 256

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           ++    + +   +       +              +  A+A  +Y   D           
Sbjct: 257 IETFEGMAKHLFKELRGVELT---------EPFLRMPWADAM-KYYGSDKPDLRFGMKFV 306

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 307 E---LMDILKGYGFSVFDN 322



 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 43/154 (27%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 415 ELRLEMGNQLGLRDKNKFACLWVVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTDP 474

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPIDEDFLACL 313
                  +++    +E+      + D   Q   FE           E         +   
Sbjct: 475 AAVRADAYDMVVNGVEVGGGSIRIHDSQLQAKMFEIL-----GFTPEKAQEQFGFLMNAF 529

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 530 KFGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 563


>gi|308234074|ref|ZP_07664811.1| aspartyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943897|ref|ZP_08241362.1| aspartate--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491866|gb|EGF23640.1| aspartate--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 593

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 67/192 (34%), Gaps = 10/192 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              R    L  R+    +LR+ F E+ FIE+++ +L + +P      +            
Sbjct: 138 RRPRVLNNLKLRSNFAHALRQAFHEHDFIEVETPALFKSTPEGARDFLVPSRVRAGHFYA 197

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +     +R+ +     QPEFT ++   +  + E 
Sbjct: 198 LPQ------SPQLLKELLMVGGVERYYQIVKCFRDEDFRADRQPEFTQVDVEMSFVTQEN 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     I+  A      K    Q++    + +       +       + +       + 
Sbjct: 252 ILDMAEAILSKAFTQVGVKF--PQHLERMQYWDAMDTYGCDKPDTRFGMKMHNVTKLVEH 309

Query: 192 PDRHLLYLQAQQ 203
               +    AQ 
Sbjct: 310 SAFKVFSQAAQH 321



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 52/162 (32%), Gaps = 14/162 (8%)

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
           DQ    L    A +  I+         +   +     E N   +         A +    
Sbjct: 406 DQAMGALRLHLADELSIKRCGHSFLWVVNFPLFHWDPERNAYASEHQPFTLPRAEDMDKL 465

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPI 305
           ++ P     +  ++      E       + D   Q    +     E + + +        
Sbjct: 466 SVDPLSVG-SYTYDFVMDGYEAGGGGMRIHDAELQMRILKMLGFTEARARAQFG------ 518

Query: 306 DEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               L  LT   P   G A+G DR+ ML+ GA++I +VI  P
Sbjct: 519 --FLLDALTFGAPPMGGFALGLDRICMLLAGADSIRDVIAFP 558


>gi|218131086|ref|ZP_03459890.1| hypothetical protein BACEGG_02691 [Bacteroides eggerthii DSM 20697]
 gi|217986790|gb|EEC53123.1| hypothetical protein BACEGG_02691 [Bacteroides eggerthii DSM 20697]
          Length = 555

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 19/199 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R+Y     FIE+++  L   +P      R F     +    
Sbjct: 102 RRATVRKNLELRHKMTIEVRKYLDSKGFIEVETPLLIGSTPEG---ARDFVVPSRMN--P 156

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +       
Sbjct: 157 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFV----Q 212

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
             D + +    A+   ++I   +                    +Y   D           
Sbjct: 213 QDDVIELFEGMAKYLFKEIRGVELTEPFQRMPWA------NAMKYYGSDKPDLRFGMKFV 266

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 267 E---LMDIMKGHGFSVFDN 282



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      I    + E  E    +        +P  E         
Sbjct: 375 ELRLEMGNQLGLRDKNKFALLWIVDFPMFEWSEEEGRLMAMHHPFTHPKDEDIPLLDTNP 434

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    IE+      + D   Q   FE           E       FL    
Sbjct: 435 AAVRADAYDMVCNGIEVGGGSIRIHDAQLQAKMFEIL-----GFTPEKAEEQFGFLMNAF 489

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V +  G ++I + I  P
Sbjct: 490 KFGAPPHGGLAYGLDRWVSIFAGLDSIRDCIAFP 523


>gi|284991587|ref|YP_003410141.1| aspartyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284064832|gb|ADB75770.1| aspartyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 591

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 27/199 (13%)

Query: 13  DFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D  YR R            L  R+ +    R    ++ F+E+++  L   +P      R 
Sbjct: 116 DVRYRYRYLDLRRQGPARVLRLRSEVNRVARGVMAQHGFVEVETPDLTRSTPEG---ARD 172

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F   + +Q    K   L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+
Sbjct: 173 FVVPVRLQ--PGKWYALPQSPQLFKQLLMIGGLERYYQIARCFRDEDFRADRQPEFTQLD 230

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
           +  +    + ++    +++R                      E   ++  EA  R+   D
Sbjct: 231 FEMSFVDRDDVLAVVEDVVRALWRELAAYEV----------PEIPRMSYREAMDRF-GSD 279

Query: 182 LGTTLDNPDQPDRHLLYLQ 200
                   +  +    + +
Sbjct: 280 KPDLRFGIELTELTSYFAE 298



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 45/135 (33%), Gaps = 7/135 (5%)

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT--KRFELYACNIELC 272
                 +     E         +   + +P S   + +  D        ++L     EL 
Sbjct: 412 WSFLFVVDFPMFEETEDGEWTFMHHPFTSPTSEWRDRFAEDKGAALSDAYDLVCNGNELA 471

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVM 331
           +    + DP  Q   FE     ++    E       FL       P  +G A+G+DR   
Sbjct: 472 SGSVRIADPDLQERVFETLGMSRE----EARERFGFFLEAFAYGPPPHAGAAIGWDRTCA 527

Query: 332 LVTGANNINEVIWTP 346
           L+ G  +I EVI  P
Sbjct: 528 LLAGVESIREVIAFP 542


>gi|46907747|ref|YP_014136.1| aspartyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|62287573|sp|Q71ZF1|SYD_LISMF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|46881016|gb|AAT04313.1| aspartyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
          Length = 591

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 57/172 (33%), Gaps = 17/172 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +     +++    + A          N         +T  EA  R+ +    
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIDKPFPRMTYKEAMDRFGSDKPD 291



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 45/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +    +  +  +    L E  E              P  E        +
Sbjct: 409 ALRNKLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 469 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 522

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 523 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|254852143|ref|ZP_05241491.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|300764814|ref|ZP_07074804.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|258605446|gb|EEW18054.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|300514490|gb|EFK41547.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 591

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 58/180 (32%), Gaps = 17/180 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 45/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +    +  +  +    L E  E              P  E        +
Sbjct: 409 ALRNKLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 469 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 522

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 523 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|226224120|ref|YP_002758227.1| aspartyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|259511864|sp|C1KVG6|SYD_LISMC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|225876582|emb|CAS05291.1| aspartyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|328465557|gb|EGF36786.1| aspartyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 591

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 58/180 (32%), Gaps = 17/180 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 45/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +    +  +  +    L E  E              P  E        +
Sbjct: 409 ALRNKLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 469 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 522

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 523 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|46577271|sp|Q8FT19|SYD_COREF RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 600

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 65/188 (34%), Gaps = 22/188 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP     L  R+    + R     + F EI++ +L   +P      R F     ++   
Sbjct: 134 RRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEG---ARDFLVPARLK--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L  AG E+ +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 188 PGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     I+    ++   +I +              IT A+A   Y +       D    
Sbjct: 248 VIALAEEILTEVWKLIGYEIST----------PIPRITYADAMRLYGSDKPDLRFDIQIT 297

Query: 192 PDRHLLYL 199
                   
Sbjct: 298 ECTDFFAD 305



 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 15/113 (13%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE----KEMQE 294
           + +P+    + +  +P       +++     E+      +     Q   F+     E + 
Sbjct: 456 FTSPKPEFLDTFDENPGEALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFKVMGISEEEA 515

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + K            L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 516 RDKFG--------FLLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 560


>gi|255025791|ref|ZP_05297777.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 591

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 58/180 (32%), Gaps = 17/180 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 44/155 (28%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    +  +  +    L E  E              P  E        +
Sbjct: 409 ALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 469 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 522

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 523 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|222874567|gb|EEF11698.1| predicted protein [Populus trichocarpa]
          Length = 166

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 48/144 (33%), Gaps = 17/144 (11%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +    + E  E N            P        +        K +++     EL     
Sbjct: 3   VVDFPMFEHDEENDRWAAVHHPFTSPKDGHEELMVTDPANCLAKAYDMVLNGWELGGGSV 62

Query: 277 ELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
            +     Q   F+      ++ + K              L  L    P   G+A G DRL
Sbjct: 63  RIHRADVQSKVFDALKISPEDARAKFG----------YLLDALQYGAPPHGGLAFGLDRL 112

Query: 330 VMLVTGANNINEVIWTPFSQSNQE 353
           + L+TGA++I +VI  P +Q  Q+
Sbjct: 113 ITLMTGADSIRDVIAFPKTQRAQD 136


>gi|254383384|ref|ZP_04998736.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194342281|gb|EDX23247.1| aspartyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 608

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 55/159 (34%), Gaps = 11/159 (6%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++AG    +   +  I    + EK E    I+        P                
Sbjct: 409 EAAKRAGQFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMKDLEEKDPLDIL 468

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT- 314
             ++++    IEL +      +P      FE         Y E   ++ +F   L     
Sbjct: 469 AWQYDIVCNGIELSSGAIRNHEPEVMLKAFEI------AGY-EAETVEREFAGMLRAFRL 521

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 522 GAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 67/200 (33%), Gaps = 19/200 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + +S+R   V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEG---ARDFVVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
                    +    E    ++F+         S    I   E+  +Y N   DL   L+ 
Sbjct: 245 -----EQEDVFQPIERLMTELFTEFGAGREVTSPFPRIPFRESMLKYGNDKPDLRAKLEL 299

Query: 189 PDQPDRHLLYLQAQQAGIRV 208
            D  D          AG  V
Sbjct: 300 VDITDVFEGSEFKAFAGKHV 319


>gi|190344765|gb|EDK36510.2| hypothetical protein PGUG_00608 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 687

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 10/128 (7%)

Query: 233 NCCTILDRYPAPESALANIY--PADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF 288
                   +P       +     +DP     + ++L    +E+      + +P+ Q++  
Sbjct: 544 WDHRESTHHPFTMVKSEDYSLLESDPYLAHGEHYDLVINGVEVGGGSRRIHNPLVQQYVL 603

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E+ ++ K       +      L  L+   P  +G+A+GFDRL  +V G  +I +VI  P 
Sbjct: 604 EEVLKIKNYNSLFGH-----LLEALSFGCPPHAGLALGFDRLCAMVVGTQSIRDVIAFPK 658

Query: 348 SQSNQEEI 355
           +QS  + +
Sbjct: 659 NQSGVDPV 666



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 56/144 (38%), Gaps = 8/144 (5%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSL-QYSPGNETHIRA 61
           +P    + +      +  L  R+ + + +R     ++ F EI++  L + +P      R 
Sbjct: 177 LPPHYRFLQLRTKELQKNLRTRSKMAAVVRHVLGEKHNFTEIETPLLFKSTPEG---ARE 233

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F       +       L  SP+   + L+++G  + +  A  +R+ +     QPEFT ++
Sbjct: 234 FLVPTRSPNKF---YALPQSPQQYKQILMSSGFTRYYQLAKCFRDEDLRADRQPEFTQVD 290

Query: 122 WYRAHESYEQLMKDCMNIIRCAAE 145
              +  S+   +   +  +     
Sbjct: 291 LEMSFISHSDQVLCVVEDVIYGIC 314


>gi|146422591|ref|XP_001487231.1| hypothetical protein PGUG_00608 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 687

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 10/128 (7%)

Query: 233 NCCTILDRYPAPESALANIY--PADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF 288
                   +P       +     +DP     + ++L    +E+      + +P+ Q++  
Sbjct: 544 WDHRESTHHPFTMVKSEDYSLLESDPYLAHGEHYDLVINGVEVGGGSRRIHNPLVQQYVL 603

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E+ ++ K       +      L  L+   P  +G+A+GFDRL  +V G  +I +VI  P 
Sbjct: 604 EEVLKIKNYNSLFGH-----LLEALSFGCPPHAGLALGFDRLCAMVVGTQSIRDVIAFPK 658

Query: 348 SQSNQEEI 355
           +QS  + +
Sbjct: 659 NQSGVDPV 666



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 56/144 (38%), Gaps = 8/144 (5%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSL-QYSPGNETHIRA 61
           +P    + +      +  L  R+ + + +R     ++ F EI++  L + +P      R 
Sbjct: 177 LPPHYRFLQLRTKELQKNLRTRSKMAAVVRHVLGEKHNFTEIETPLLFKSTPEG---ARE 233

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F       +       L  SP+   + L+++G  + +  A  +R+ +     QPEFT ++
Sbjct: 234 FLVPTRSPNKF---YALPQSPQQYKQILMSSGFTRYYQLAKCFRDEDLRADRQPEFTQVD 290

Query: 122 WYRAHESYEQLMKDCMNIIRCAAE 145
              +  S+   +   +  +     
Sbjct: 291 LEMSFISHSDQVLCVVEDVIYGIC 314


>gi|262277376|ref|ZP_06055169.1| aspartyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224479|gb|EEY74938.1| aspartyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 595

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 5/156 (3%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++  +    +  +  I    + E  E    I         P  +    +        
Sbjct: 419 KIAEELNLINKDEFAFCWIVDYPMYEVDEKTKKITFSHNPFSMPQGDIENLDFNDPLNIK 478

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
             ++++    IEL +       P      F      K+++  E   +    +       P
Sbjct: 479 AYQYDIVCNGIELSSGAIRNHKPDLMYKLFSVAGYSKEEVDTEFSGM----INAFSYGAP 534

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              GIA G DR++ML+    NI EV   P +Q+ Q+
Sbjct: 535 PHGGIAPGIDRIIMLLADEKNIREVTMFPMNQNAQD 570



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 18/192 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + S +R+   +  F+E  +  L   SP      R F     +    
Sbjct: 134 RRKRIHKNIILRSEVISFIRDEMKKFGFLEFQTPILTSSSPEG---ARDFLVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ AG +K F  A  +R+ +      P EF  L+   +  +  
Sbjct: 188 PGKFYALPQAPQQFKQLIMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVNQN 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
           Q+      ++    E  + K    +            I   ++  +Y   D     +   
Sbjct: 248 QVFDILEKLLSSVFEKFSNKKIINKV--------FPRIPYEQSMLKY-GTDKPDLRNPLV 298

Query: 191 QPDRHLLYLQAQ 202
             D   ++ +  
Sbjct: 299 ILDVSEIFKRED 310


>gi|283458011|ref|YP_003362618.1| aspartyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134033|dbj|BAI64798.1| aspartyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 620

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 27/198 (13%)

Query: 13  DFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            +  R+    + R    E+ +IE+++ +L   +P      R 
Sbjct: 147 EARLRYRYLDLRRPEPARIMRLRSDANRAARNLLAEDGYIEVETPTLTRSTPEG---ARD 203

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L   G EK +  A  +R+ +     QPEFT L+
Sbjct: 204 FLVPARL--APGSWYALPQSPQLFKQLLQVGGIEKYYQIARCYRDEDFRADRQPEFTQLD 261

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    E +++    I+             +  ++       + +T  +A  +Y   D
Sbjct: 262 IEASFVDQEDIIELGERIVEA----------VWNLIDVKVPRPIQRMTYKDAMEKY-GSD 310

Query: 182 LGTTLDNPDQPDRHLLYL 199
                   +  +    + 
Sbjct: 311 KPDLRFGLELTELTEYFK 328



 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P+    + +  DP       +++     E+      +     Q   F          
Sbjct: 480 FTSPKPEFMDTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVF----AVMGIG 535

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G+DR+V L+ G ++I EVI  P
Sbjct: 536 EEEAQEKFGFLLDAFKYGAPPMGGIAFGWDRIVSLLAGVDSIREVIAFP 584


>gi|290985078|ref|XP_002675253.1| tentative aspartyl-tRNA synthetase [Naegleria gruberi]
 gi|284088848|gb|EFC42509.1| tentative aspartyl-tRNA synthetase [Naegleria gruberi]
          Length = 687

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 100/307 (32%), Gaps = 35/307 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQ-FIEIDSMSL-QYSPGNETHIRAFSTELIIQD 70
            RRR     L  R+   +  R+YF E   F+EI++ +L + +P           E ++  
Sbjct: 205 LRRRQLVENLSIRSKALAITRKYFGEMNRFLEIETPTLFKSTPEGAR-------EFLVPT 257

Query: 71  HIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
             +   Y L  SP+   + L+  G ++ F  A  +R+       QPEFT ++   +  + 
Sbjct: 258 RQKGKFYALTQSPQQYKQLLMVGGMDRYFQIARCYRDESGRMDRQPEFTQIDLEMSFLTQ 317

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + +     N I         K+     +  +  +  + +   +A   Y +       ++ 
Sbjct: 318 KDIYALIENFI---------KMLWKDILGIDIKTPFQQMKYRDAMDMYGSDKPDLRYEDL 368

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
              +   ++   +     V      +     +  ++I   +                   
Sbjct: 369 KFKNVTEIFKNEKSQIEIVNQTVADAGFVYALKAKQIGATMTRKIIDQFTEKAKSVEKTR 428

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
            I        +  E +                 +Q+ +  +++  K+        +D+++
Sbjct: 429 LIISTKIGKPE--EPFLNGKLT----------EQQQAKLREQLDLKE-GDMLILSVDKEW 475

Query: 310 LACLTEM 316
              +  +
Sbjct: 476 ETTVKGL 482



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 15/150 (10%)

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYP--------APESALANIYPADPRFTKRFELYAC 267
            +F R   +  + +L  +       +P         P     ++        + ++    
Sbjct: 517 QLFERAKDQHGQAHLHTSRGLSAMHHPFTAPHAEDIPLLYSDDVNDILKVRGQHYDCVLN 576

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
            +EL      +     Q++  EK ++        T       +  L    P   G+A+GF
Sbjct: 577 GVELGGGSIRIHQADMQKYVLEKVLEL---GEERTMVRFGHLIEALSYGAPPHGGLALGF 633

Query: 327 DRLVMLVTG---ANNINEVIWTPFSQSNQE 353
           DRL+ L+ G   A  + +VI  P S S  E
Sbjct: 634 DRLICLLCGEDKAKTLRDVIAFPKSSSGNE 663


>gi|254824422|ref|ZP_05229423.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|255521238|ref|ZP_05388475.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|293593657|gb|EFG01418.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|328474880|gb|EGF45680.1| aspartyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332311961|gb|EGJ25056.1| Aspartyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 591

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 58/180 (32%), Gaps = 17/180 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 45/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +    +  +  +    L E  E              P  E        +
Sbjct: 409 ALRNKLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 469 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 522

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 523 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|313623669|gb|EFR93823.1| aspartyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 591

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 60/188 (31%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299

Query: 192 PDRHLLYL 199
               ++  
Sbjct: 300 NVSEVVKD 307



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 53/191 (27%), Gaps = 15/191 (7%)

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
                 AE  A     D    L   D+ D     L A +  +    D    D  + + + 
Sbjct: 373 FPEDKAAELQAALQAEDGDLLLFAADKADIVAASLGALRNKLGKDLDLINEDELAFLWVT 432

Query: 225 KI------EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
                   E              P  E        +     + +++     E+      +
Sbjct: 433 DWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRI 492

Query: 279 LDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTG 335
                Q   F      +                +  L    P   GIA+G DR+VM++ G
Sbjct: 493 YKKEVQESMF------RALGFTDESAKEQFGFLMEALEYGTPPHGGIALGLDRIVMILAG 546

Query: 336 ANNINEVIWTP 346
            NN+ + I  P
Sbjct: 547 RNNLRDTIAFP 557


>gi|237717546|ref|ZP_04548027.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229453132|gb|EEO58923.1| aspartyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 587

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 20/199 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RR   R  L  R+ +   +R+Y     FIE+++  L          R F     +    
Sbjct: 131 LRRNAVRSNLELRHRMTIEVRKYLDSLGFIEVETPVL--IGSTPEGARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQEDI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +                    + ++ A+A  +Y   D           
Sbjct: 247 ITTFEGMAKHLFKTLRGVEL---------AEPFQRMSWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFSVFDN 312



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + D   Q   FE           E       FL    
Sbjct: 465 AAVRADAYDMVVNGVEVGGGSIRIHDAKLQAKMFEIL-----GFTPEKAQAQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|260175001|ref|ZP_05761413.1| aspartyl-tRNA synthetase [Bacteroides sp. D2]
 gi|299145644|ref|ZP_07038712.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|315923234|ref|ZP_07919474.1| aspartyl-tRNA synthetase [Bacteroides sp. D2]
 gi|298516135|gb|EFI40016.1| aspartate--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|313697109|gb|EFS33944.1| aspartyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 587

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 20/199 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RR   R  L  R+ +   +R+Y     FIE+++  L          R F     +    
Sbjct: 131 LRRNAVRSNLELRHRMTIEVRKYLDSLGFIEVETPVL--IGSTPEGARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQEDI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +                    + ++ A+A  +Y   D           
Sbjct: 247 ITTFEGMAKHLFKTLRGVEL---------AEPFQRMSWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGHGFSVFDN 312



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + D   Q   FE           E       FL    
Sbjct: 465 AAVRADAYDMVVNGVEVGGGSIRIHDAKLQAKMFEIL-----GFTPEKAQAQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|149003235|ref|ZP_01828131.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147758695|gb|EDK65692.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 377

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 77/238 (32%), Gaps = 18/238 (7%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   L  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+   P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 234

Query: 123 YRAHESYEQLMKDCMNIIRCAA--------EVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             ++ ++++ +      ++           +         + +        + IT  +A 
Sbjct: 235 EYSYLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAI 294

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
                 +     D         L++  +    +           S      +      
Sbjct: 295 DLLQEHENDEDADYEHLEHGDRLWVTTRNLDFKPLWCANICHELSSSHQGLLHETSSW 352


>gi|254828247|ref|ZP_05232934.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258600635|gb|EEW13960.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 591

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 58/180 (32%), Gaps = 17/180 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 44/155 (28%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    +  +  +    L E  E              P  E        +
Sbjct: 409 ALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 469 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 522

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 523 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|77627987|ref|NP_001029315.1| aspartyl-tRNA synthetase, mitochondrial precursor [Rattus
           norvegicus]
 gi|115502848|sp|Q3KRD0|SYDM_RAT RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|76779332|gb|AAI05775.1| Aspartyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus]
 gi|149058269|gb|EDM09426.1| aspartyl-tRNA synthetase 2 (mitochondrial) [Rattus norvegicus]
          Length = 652

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P     L           + ++L     E+      + D   QR+  E  ++       
Sbjct: 507 HPGDIHLLYTEPEKVRG--QHYDLVLNGNEIGGGSIRIHDAQLQRYILETLLK------- 557

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRLV LVTGA +I +VI  P
Sbjct: 558 EDVKLLSHLLQALDYGAPPHGGIALGLDRLVCLVTGAPSIRDVIAFP 604



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 61/174 (35%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 186 LRLRSQMVMKMREYLCTLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGRF---YSLP 239

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +       
Sbjct: 240 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQHLVE-- 297

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
                       +S+        +    +T AEA A Y   D   T       D
Sbjct: 298 --------GLLHYSWPEDKDPLVAPFPSMTFAEALATY-GTDKPDTRFGMKIVD 342


>gi|296270026|ref|YP_003652658.1| aspartyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296092813|gb|ADG88765.1| aspartyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 584

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 9/153 (5%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP--APESALANIYPADP 256
              ++ G+      ++  +    + E +  + G         +P  AP+   A+ +   P
Sbjct: 400 EIGRRCGLIDESKWSFLWVVDAPMFEPLYDDRGEQIGWTSVHHPFTAPKPEWADNFQDHP 459

Query: 257 RFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
                  +++    +E+      +     Q+  F+     K+    E        L    
Sbjct: 460 GEALACAYDMICNGMEIGGGSIRIHRAEMQQRVFDVLGISKE----EAETKFGFLLEAFK 515

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G+DR+ ML+ G  +I +VI  P
Sbjct: 516 YGPPPHGGIAFGWDRICMLLAGGESIRDVIAFP 548



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 66/188 (35%), Gaps = 19/188 (10%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR+     L  R+       E   E+ F+ +++ +L   +P      R F   + +Q  
Sbjct: 127 LRRQQVAEALKIRSRATYLAHEVMREHGFVYVETPNLTRSTPEG---ARDFLVPVRLQ-- 181

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 182 PGNWYALPQSPQLFKQLLMVGGLERYYQLARCFRDEDLRADRQPEFTQIDAEMSFVDEDD 241

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +I    +                 +    ++ AEA ARY   D        + 
Sbjct: 242 VIAVAETLIGRIWKEILGYELP---------TPLPRMSYAEAMARY-GTDKPDLRFGVEL 291

Query: 192 PDRHLLYL 199
            D    + 
Sbjct: 292 VDLTEYFK 299


>gi|302409622|ref|XP_003002645.1| lysyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261358678|gb|EEY21106.1| lysyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 384

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 11/103 (10%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK----------IYNETYPIDED 308
           + R EL+    EL N  +E  DP  Q  +  +      +             E  P+D+ 
Sbjct: 254 SARAELFVDGRELANMYEEENDPAAQARKLAEHRVLAGQKPGEDDGELDADMEAAPLDKS 313

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           ++  +   +P + G   G DRLVML +GAN I++ +     ++
Sbjct: 314 YIKAMEAGLPPTGGWGCGVDRLVMLFSGANRISDCLTFGTLRN 356


>gi|87304128|ref|ZP_01086677.1| Aspartyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87281458|gb|EAQ73519.1| Aspartyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 406

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 13/156 (8%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +        +  F  ++   +    G         +P       ++     ++ 
Sbjct: 240 LAKELKLVQPDRQNDAWNFLWVVDFPMFEFNGDEDRYEALHHPFCAPNTDDLGSDPAQWA 299

Query: 260 --------KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
                   + ++L    +EL      + D   QR   +      +    E        + 
Sbjct: 300 TTLPSARAQAYDLVLNGLELGGGSLRIHDSALQRQVLQTVGLPLE----EAQEQFGFLIN 355

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L    P   G+A G DR+VML+ G  +I + I  P
Sbjct: 356 ALDMGAPPHGGLAFGIDRMVMLLAGEESIRDTIAFP 391



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 10/116 (8%)

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   +    EQ+++ 
Sbjct: 13  FALPQSPQLFKQLLMVGGIERYYQVARCFRDEDVRADRQPEFTQLDIEMSFMGEEQILQL 72

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
             ++I    +                      +T  +A  RY   D   T    + 
Sbjct: 73  NEDLICAIWKSVKG---------IELPRPFPRMTWHDAMERY-GTDRPDTRYGMEL 118


>gi|187731320|ref|YP_001882806.1| lysyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|187428312|gb|ACD07586.1| lysyl-tRNA synthetase [Shigella boydii CDC 3083-94]
          Length = 77

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 42  IEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           +E+++  +Q  PG  +  R F T     + +   +YL+ +PE   K+L+  G E++F   
Sbjct: 1   MEVETPMMQVIPGGAS-ARPFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEIN 56

Query: 102 HAWRNGEQGCLHQPEFTMLEW 122
             +RN      H PEFTM+E 
Sbjct: 57  RNFRNEGISVRHNPEFTMMEL 77


>gi|301631421|ref|XP_002944796.1| PREDICTED: aspartyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 415

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 48/157 (30%), Gaps = 14/157 (8%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +Q G+          +   +     E +  +         P                 K 
Sbjct: 240 KQNGLFENRWAPLWVVDFPMFEHDAEEDRWVAVHHPFTS-PKDGHEDLMDTDPAKCIAKA 298

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEM----QEKKKIYNETYPIDEDFLACL-TEM 316
           +++     EL      +     Q   F         ++ K            L  L    
Sbjct: 299 YDMVLNGWELGGGSVRIHRADVQAKVFAALNIGPQDQRAKFG--------YLLDALQYGA 350

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G+A G DRL+ L+TGA +I +VI  P +Q  Q+
Sbjct: 351 PPHGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQD 387


>gi|115434592|ref|NP_001042054.1| Os01g0153400 [Oryza sativa Japonica Group]
 gi|113531585|dbj|BAF03968.1| Os01g0153400 [Oryza sativa Japonica Group]
          Length = 384

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 15/146 (10%)

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
           ++   DT +     +    +              +P       ++          +++  
Sbjct: 220 KLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNPEDMNDLPSARALAYDMIY 279

Query: 267 CNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
             +E+      +     Q+  FE      ++ +EK     E + +           P   
Sbjct: 280 NGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDM---------GAPPHG 330

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DRLVML+ G N+I +VI  P
Sbjct: 331 GIAYGLDRLVMLLAGENSIRDVIAFP 356



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 10/114 (8%)

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            + L+ +G EK +  A  +R+ +     QPEFT L+   A  S E ++K    ++R   +
Sbjct: 1   KQMLMVSGFEKYYQIARCFRDEDLRADRQPEFTQLDMEIAFTSMEDMLKLNEELMRHIFQ 60

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                       +    +    +T  EA  RY   D      +    D    +L
Sbjct: 61  EVG---------DIKLPNPFPRLTYTEAMNRY-GTDRPDLRFDWQLKDVSDAFL 104


>gi|254931454|ref|ZP_05264813.1| aspartyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293583006|gb|EFF95038.1| aspartyl-tRNA synthetase [Listeria monocytogenes HPB2262]
          Length = 591

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 58/180 (32%), Gaps = 17/180 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 45/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +    +  +  +    L E  E              P  E        +
Sbjct: 409 ALRNKLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 469 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 522

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 523 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|224499821|ref|ZP_03668170.1| aspartyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 552

 Score = 93.9 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 58/180 (32%), Gaps = 17/180 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 96  RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 155

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 156 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 209

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 210 IQAITEDMLVDVVKEA---------KNITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 260



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 44/155 (28%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    +  +  +    L E  E              P  E        +
Sbjct: 370 ALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 429

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 430 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 483

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 484 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 518


>gi|293373057|ref|ZP_06619425.1| aspartate--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292631943|gb|EFF50553.1| aspartate--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 611

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 20/199 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RR   R  L  R+ +   +R+Y     FIE+++  L          R F     +    
Sbjct: 155 LRRNAVRSNLELRHRMTIEVRKYLDSLGFIEVETPVL--IGSTPEGARDFVVPSRMN--P 210

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 211 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQEDI 270

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +                    + ++ A+A  +Y   D           
Sbjct: 271 ITTFEGMAKHLFKTLRGVEL---------AEPFQRMSWADAM-KYYGSDKPDLRFGMKFV 320

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 321 E---LMDIMKGHGFSVFDN 336



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 429 ELRLEMGAQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPMLDTDP 488

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + D   Q   FE           E       FL    
Sbjct: 489 AAVRADAYDMVVNGVEVGGGSIRIHDAKLQAKMFEIL-----GFTPEKAQAQFGFLMNAF 543

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 544 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 577


>gi|215765302|dbj|BAG86999.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 382

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 15/146 (10%)

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
           ++   DT +     +    +              +P       ++          +++  
Sbjct: 218 KLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNPEDMNDLPSARALAYDMIY 277

Query: 267 CNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
             +E+      +     Q+  FE      ++ +EK     E + +           P   
Sbjct: 278 NGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDM---------GAPPHG 328

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DRLVML+ G N+I +VI  P
Sbjct: 329 GIAYGLDRLVMLLAGENSIRDVIAFP 354



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 10/112 (8%)

Query: 88  KLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
            L+ +G EK +  A  +R+ +     QPEFT L+   A  S E ++K    ++R   +  
Sbjct: 1   MLMVSGFEKYYQIARCFRDEDLRADRQPEFTQLDMEIAFTSMEDMLKLNEELMRHIFQEV 60

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                     +    +    +T  EA  RY   D      +    D    +L
Sbjct: 61  G---------DIKLPNPFPRLTYTEAMNRY-GTDRPDLRFDWQLKDVSDAFL 102


>gi|118094150|ref|XP_422251.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 561

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 8/127 (6%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           + + K E    +         P P              ++ ++L     E+      + +
Sbjct: 402 LFLPKEENPSELESAHHPFTAPHPLDTDLLYSDPTKVRSQHYDLVLNGSEIGGGSIRIHN 461

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
             +QR   EK ++       E   +    L  L    P   GIA+G DRL+ L+ G+ +I
Sbjct: 462 AEQQRFVLEKVLK-------EDSEVLSHLLEALEFGAPPHGGIALGLDRLISLIVGSPSI 514

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 515 RDVIAFP 521



 Score = 53.5 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 33/106 (31%), Gaps = 8/106 (7%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           + + K E    +         P P              ++ ++L     E+      + +
Sbjct: 271 LFLPKEENPSELESAHHPFTAPHPLDTDFLYSDPTKVRSQHYDLVLNGSEIGGGSIRIHN 330

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMG 325
             +QR   EK ++       E   +    L  L    P   GIA+G
Sbjct: 331 AEQQRFVLEKVLK-------EDSEVLSHLLEALEFGAPPHGGIALG 369



 Score = 52.7 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 42/136 (30%), Gaps = 14/136 (10%)

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             + F               L  SP+   + L+  G ++ F  A  +R+       QPEF
Sbjct: 7   GAKEFLVPSREAGKF---YSLPQSPQQFKQLLMIGGLDRYFQVARCYRDEGSRPDRQPEF 63

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T ++   +      + +    +++           S+        +    +T  EA A Y
Sbjct: 64  TQIDIEMSFVDQAGIQRLIEGLLQY----------SWPEERGPITTPFPTMTYDEALADY 113

Query: 178 ANIDLGTTLDNPDQPD 193
              D   T       D
Sbjct: 114 -GTDKPDTRFGMKIVD 128


>gi|56416505|ref|YP_153579.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|56387737|gb|AAV86324.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 296

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 16/156 (10%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           +L R+M+ S LR       FIE+ +  L   SP     +I    T       + +     
Sbjct: 144 ILLRSMVVSELRRAMEALGFIEVHTPILTSSSPEGARDYIVPSRTHAGKFYALPQ----- 198

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQLMKDCMN 138
            +P+   + L+  G +K F  A  +R+ +      P EF  L+   +  +         +
Sbjct: 199 -APQIFKQLLMVGGFDKYFQIAPCFRDEDSRADRSPGEFYQLDMEMSFVT-------QED 250

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           +      V       F   +     +   IT  + +
Sbjct: 251 VFAAIEPVLYGLFAKFAGADKKVDRQFPRITYRDFY 286


>gi|332299449|ref|YP_004441370.1| aspartyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176512|gb|AEE12202.1| aspartyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 580

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 68/230 (29%), Gaps = 7/230 (3%)

Query: 16  YRRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RRRP L     R+ +    R Y     F+EI++  L          R F     +    
Sbjct: 127 LRRRPVLSNIELRHRMTMETRRYLDGLHFLEIETPML--IGSTPEGARDFVVPSRMN--P 182

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    + +
Sbjct: 183 GQFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQDDI 242

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +                +   +     +   R+       T       
Sbjct: 243 LSTFEGLAKHLFKEIRGIDLPTPLRRMTWYEAMDRYGSDKPDLRFGMEIEEVTETIQGHG 302

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              +       A +     D       ++      P +G      L   P
Sbjct: 303 FGVVDSAAYIGAIVVTGKADYTRKQIDQLTDFVKRPQVGAKGLLWLRYQP 352



 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 42/148 (28%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A + G+          +    L+E  E              P PE              
Sbjct: 405 IASELGLMKPGQYECLWVVDFPLLEWDEETQRYYAMHHPFTAPKPEDQDRLESDPGSVRA 464

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++    +E+      + D   Q   F      K++            +       P 
Sbjct: 465 DAYDMVINGVEVGGGSIRIHDAELQARVFATLGFTKER----AEEQFGFLMNAFKYGAPP 520

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             GIA G DR V L+   ++I + I  P
Sbjct: 521 HGGIAFGLDRWVSLMAELDSIRDCIAFP 548


>gi|322704418|gb|EFY96013.1| aspartate-tRNA ligase [Metarhizium anisopliae ARSEF 23]
          Length = 453

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 97/318 (30%), Gaps = 32/318 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                       + +   + E+   N F  I +   +  +   +        E     + 
Sbjct: 145 RRAASGAIFKLHSGMCQLIVEFLCSNGFHWIHTPRIITATIPGD-------NEFFHLPYF 197

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG---EQGCLHQPEFTMLEWYRAHESY 129
            +  +L  S +   +  L+   +++F     +R      +   H  EFT+L+   A +  
Sbjct: 198 GQDAWLAQSSQHHKQMALSMDMQRVFEIGPVFRAEVKSSKSTRHMTEFTVLDIAMAFQDD 257

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              + + +  +        Q+   ++ +        E +      AR   I L      P
Sbjct: 258 YHEVAELIESMLVFVFRGLQERKQYKPLV-------EIVQHLYPCARPFRIGLDEHGKVP 310

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE--PNLGINCCTILDRYPAPESA 247
                    +  ++ G+       ++D     L       P LG      +D+YPA    
Sbjct: 311 RITFLEAKRILREELGLESDDGKNFTDQEEAALGRHFRESPRLGSTDVFTIDQYPASMRQ 370

Query: 248 LANIYPAD-PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK--IYNETYP 304
             +   AD P F+  ++      E+C+    +    E R         +           
Sbjct: 371 FNSQANADAPGFSNTWDTIVGGREICSGSQRINSYDELRE------AMRAGVCGPPLDPE 424

Query: 305 IDED--FLACLT-EMPQS 319
           +D+   +LA     MP+ 
Sbjct: 425 VDKWQPYLAAFKSGMPRH 442


>gi|302535469|ref|ZP_07287811.1| aspartyl-tRNA synthetase [Streptomyces sp. C]
 gi|302444364|gb|EFL16180.1| aspartyl-tRNA synthetase [Streptomyces sp. C]
          Length = 610

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 55/159 (34%), Gaps = 11/159 (6%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++AG    +   +  I    + EK E    I+        P                
Sbjct: 409 EAAKRAGQFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMKDLEEKDPLDIL 468

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT- 314
             ++++    IEL +      +P      FE         Y E   ++ +F   L     
Sbjct: 469 AWQYDIVCNGIELSSGAIRNHEPEVMLKAFEI------AGY-EAETVEREFAGMLRAFRL 521

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 522 GAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 67/200 (33%), Gaps = 19/200 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + +S+R   V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEG---ARDFVVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
                    +    E    ++F+         S    I   E+  +Y N   DL   L+ 
Sbjct: 245 -----EQEDVFQPIEKLMTELFTEFGGGRPVTSPFPRIPFRESMLKYGNDKPDLRAKLEL 299

Query: 189 PDQPDRHLLYLQAQQAGIRV 208
            D  D          AG  V
Sbjct: 300 VDITDVFEGSEFKAFAGKHV 319


>gi|50556998|ref|XP_505907.1| YALI0F26433p [Yarrowia lipolytica]
 gi|49651777|emb|CAG78719.1| YALI0F26433p [Yarrowia lipolytica]
          Length = 649

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 10/112 (8%)

Query: 240 RYPAPESAL--ANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            +P   + L    +   DP     + ++L    +E+      + D   Q + F++ M+  
Sbjct: 508 HHPFTMAVLEDYPLLETDPLKVRGQHYDLVLNGVEVGGGSTRVHDSQLQNYIFKEIMKI- 566

Query: 296 KKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 +  +    L       P  +G A+GFDRLV ++ G ++I +VI  P
Sbjct: 567 ----PNSEKLFGHLLRAFDVGCPPHAGFAIGFDRLVAMLAGYSSIRDVIAFP 614



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 75/192 (39%), Gaps = 10/192 (5%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P++  + +    + +  L  R     + R       F E+++  L + +P      R F 
Sbjct: 161 PAEYRYLQLRQPQLQAALKLRANAMRASRSVLDNLGFTEVETPLLFKSTPEG---AREFL 217

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                ++ +     L  SP+   + L+A+G  + +  A  +R+ +     QPEFT ++  
Sbjct: 218 VPTRKRNLM---YALPQSPQQYKQLLMASGVHRYYQLAKCFRDEDLRQDRQPEFTQVDME 274

Query: 124 RAHESYEQLMKDCMN-IIRCAAEVANQKIFSFQ-NVNCNPFSEPEYITVAEAFARYANID 181
            A  +   + +     +++  A+  N+ I++   N N    S    +T  EA  +Y  ID
Sbjct: 275 MAFANGADVREVVEKLVLKIFADTVNKNIYTLDANENLVQQSTFNPMTFKEALGKY-GID 333

Query: 182 LGTTLDNPDQPD 193
                      D
Sbjct: 334 KPDLRYTCAITD 345


>gi|16126135|ref|NP_420699.1| aspartyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|24212419|sp|Q9A734|SYD_CAUCR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|13423341|gb|AAK23867.1| aspartyl-tRNA synthetase [Caulobacter crescentus CB15]
          Length = 609

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 62/190 (32%), Gaps = 23/190 (12%)

Query: 11  NRDFHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +   RR  L    + R+ +  S+R       F E  +  L   SP      R F  
Sbjct: 126 LKHRYLDLRRETLHKNIVLRSRVIQSIRNRMFAQGFNEFQTPILTASSPEG---ARDFLV 182

Query: 65  ELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
              +     +  Y L  +P+   + L+ +G ++ F  A  +R+ +       EF  L+  
Sbjct: 183 PSRLH---PEKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSLEFYQLDVE 239

Query: 124 RAHESYEQLMKDCMNIIRCAAEVA----------NQKIFSFQNVNCNPFSEPEYITVAEA 173
            +  + E +      ++    E                F+            E +T A++
Sbjct: 240 MSFVTQEDVFAAIEPVMHGVFEEFSNGKPVSPINGTHTFTNDFGQSFEHKGFERLTYAQS 299

Query: 174 FARYANIDLG 183
            A Y +    
Sbjct: 300 MAWYGSDKPD 309



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 48/155 (30%), Gaps = 11/155 (7%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +  +   +   +  I    + E  E    ++        P                  ++
Sbjct: 435 ELKLVDENQFKFCWIVDFPMFEWNEEEKKVDFSHNPFSMPQGGLEALETQDPLTIRAYQY 494

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQ 318
           ++     ELC+       P      F          Y     ++E F   L       P 
Sbjct: 495 DIVCNGYELCSGAIRNHKPEIMLKAFAT------AGYGPE-VVEEQFGGMLNAFRYGAPP 547

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G+A G DR+VML+     I EVI  P +Q  Q+
Sbjct: 548 HGGLAPGIDRIVMLLADQVAIREVIAFPLNQQGQD 582


>gi|313885986|ref|ZP_07819724.1| aspartate--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924516|gb|EFR35287.1| aspartate--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 580

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 68/230 (29%), Gaps = 7/230 (3%)

Query: 16  YRRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RRRP L     R+ +    R Y     F+EI++  L          R F     +    
Sbjct: 127 LRRRPVLSNIELRHRMTMETRRYLDGLHFLEIETPML--IGSTPEGARDFVVPSRMN--P 182

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    + +
Sbjct: 183 GQFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQDDI 242

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +                +   +     +   R+       T       
Sbjct: 243 LSTFEGLAKHLFKEIRGIDLPTPLRRMTWYEAMDRYGSDKPDLRFGMEIEEVTETIQGHG 302

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
              +       A +     D       ++      P +G      L   P
Sbjct: 303 FGVVDSAAYIGAIVVTGKADYTRKQIDQLTDFVKRPQVGAKGLLWLRYQP 352



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 42/148 (28%), Gaps = 5/148 (3%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A + G+          +    L+E  E              P PE              
Sbjct: 405 IASELGLMKPGQYECLWVVDFPLLEWDEETQRYYAMHHPFTAPKPEDQDRLESDPGSVRA 464

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             +++    +E+      + D   Q   F      K++            +       P 
Sbjct: 465 DAYDMVINGVEVGGGSIRIHDAELQARVFAALGFTKER----AEEQFGFLMNAFKYGAPP 520

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             GIA G DR V L+   ++I + I  P
Sbjct: 521 HGGIAFGLDRWVSLMAELDSIRDCIAFP 548


>gi|289178445|gb|ADC85691.1| Aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 643

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 69/195 (35%), Gaps = 21/195 (10%)

Query: 4   IPSQPWWNRDFHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNET 57
           +P +    +  +   RRP +      R+ +  + R    +  F E+++   ++ +P    
Sbjct: 168 LPGEDVRLKYRYLDLRRPAMQRNIKLRSDMMRAARTELDKLGFTEVETPTMIKSTPEG-- 225

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F     +         L  SP+   + L+ AG E+ + FA  +R+ +     QPEF
Sbjct: 226 -ARDFVVPARLV--PGSWYALPQSPQLLKQLLMVAGVERYYQFARCYRDEDFRADRQPEF 282

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T L+   +    E ++     +I+   +     I +              I   EA  +Y
Sbjct: 283 TQLDMEMSFVDQEDVIAMAEQVIKAIWKADGYDIET----------PIRRIPWQEAMDKY 332

Query: 178 ANIDLGTTLDNPDQP 192
            +        N    
Sbjct: 333 GSDKPDLRFGNELIE 347



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 19/121 (15%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE-- 289
                +P         + +  DP       +++     E+      +     Q       
Sbjct: 497 WTSMHHPFTMPSKDWIDTFDEDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVL 556

Query: 290 ----KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               +E Q+K     E +             P  +GIA+G+DR V L+ GA++I +VI  
Sbjct: 557 GITPQEAQDKFGFLLEAFK---------YGAPPHAGIALGWDRTVALLAGADSIRDVIAF 607

Query: 346 P 346
           P
Sbjct: 608 P 608


>gi|54290457|dbj|BAD61344.1| putative aspartyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 604

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 15/146 (10%)

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
           ++   DT +     +    +              +P       ++          +++  
Sbjct: 440 KLEVIDTSAHSILWVTDFPMFEWNSDEQRYEALHHPFTAPNPEDMNDLPSARALAYDMIY 499

Query: 267 CNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSS 320
             +E+      +     Q+  FE      ++ +EK     E + +           P   
Sbjct: 500 NGVEIGGGSLRIYKSDVQQRIFEIIGISPEQAEEKFGYLLECFDM---------GAPPHG 550

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DRLVML+ G N+I +VI  P
Sbjct: 551 GIAYGLDRLVMLLAGENSIRDVIAFP 576



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 39/187 (20%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
              + +  L  R+ +   +R Y  +   F+E                             
Sbjct: 176 RRPQMQSNLRLRHNVVKHIRRYLEDRHDFVE----------------------------P 207

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G EK +  A  +R+ +     QPEFT L+   A  S E +
Sbjct: 208 GMFYALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRADRQPEFTQLDMEIAFTSMEDM 267

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +K    ++R   +            +    +    +T  EA  RY   D      +    
Sbjct: 268 LKLNEELMRHIFQEVG---------DIKLPNPFPRLTYTEAMNRY-GTDRPDLRFDWQLK 317

Query: 193 DRHLLYL 199
           D    +L
Sbjct: 318 DVSDAFL 324


>gi|157825326|ref|YP_001493046.1| aspartyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166225382|sp|A8GMB3|SYD_RICAH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157799284|gb|ABV74538.1| aspartyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 602

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 58/180 (32%), Gaps = 17/180 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ I S +R   +   F E  +  L   SP      R F   
Sbjct: 128 KHRFLDLRREKLHNNIILRSQIISHIRHLMMARGFTEFQTPILTASSPEG---ARDFLVP 184

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+  
Sbjct: 185 SRMH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDLE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  +           +    E     +F+         +    I   E+  +Y +    
Sbjct: 242 MSFVT--------QEDVFSTIEPVMYDLFNKFTDKKVSATPFVRIPYNESMLKYGSDKPD 293



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 50/163 (30%), Gaps = 21/163 (12%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP----APESALANIYPADPR 257
           ++  +       +  I      E  E    I+        P                   
Sbjct: 418 EELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGLEALENAKTTEALLEL 477

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLA 311
              ++++    IEL +       P      F      E+E+ ++              + 
Sbjct: 478 NAYQYDIVCNGIELSSGAIRNHKPDIMYKAFSIAGYSEEEVNKRFGGM----------IR 527

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR+VML+  A NI EVI  P +Q  ++
Sbjct: 528 AFKFGAPPHGGIAPGIDRIVMLLAEATNIREVIAFPLNQQAED 570


>gi|118471914|ref|YP_887321.1| aspartyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|166225364|sp|A0QWN3|SYD_MYCS2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|118173201|gb|ABK74097.1| aspartyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 598

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 69/199 (34%), Gaps = 29/199 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            L  R+ + ++ R    E+ F+EI++ +L   +P      R 
Sbjct: 118 EARLKYRYLDLRREGPGNALRLRSKVNAAARSVLAEHDFVEIETPTLTRSTPEG---ARD 174

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     +Q       Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L
Sbjct: 175 FLVPARLQ---PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQL 231

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + ++     +++                  +       I+  EA  R+   
Sbjct: 232 DMEMSFVEADDVIAISEQVLKAVWATIG----------YDLPLPLPRISYEEAMRRF-GS 280

Query: 181 DLGTTLDNPDQPDRHLLYL 199
           D        +  +    + 
Sbjct: 281 DKPDLRFGIELVECTEYFK 299



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + AP+    + + +DP       +++     E+      +     Q   F     +    
Sbjct: 451 FTAPKPDSVDTFDSDPGNALSDAYDIVCNGNEIGGGSIRIHRRDIQERVFAMMGID---- 506

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           ++E        L       P   GIA G+DR+  L+ G ++I EVI  P
Sbjct: 507 HDEAQEKFGFLLDAFSYGAPPHGGIAFGWDRITALLAGVDSIREVIAFP 555


>gi|298385641|ref|ZP_06995199.1| aspartate--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298261782|gb|EFI04648.1| aspartate--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 587

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 20/199 (10%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RR   R  L  R+ +   +R+Y     FIE+++  L          R F     +    
Sbjct: 131 LRRNAVRSNLELRHKMTIEVRKYLDSLGFIEVETPVL--IGSTPEGARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ +G ++ F  A  +R+ +     QPEFT ++   +    E +
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQEDI 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + +   +       +            + +  A+A  +Y   D           
Sbjct: 247 ISTFEGMAKHLFKTLRGVELT---------EPFQRMPWADAM-KYYGSDKPDLRFGMKFV 296

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           +   L    +  G  V  +
Sbjct: 297 E---LMDIMKGYGFSVFDN 312



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 44/154 (28%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 405 ELRLEMGSQLGLRDKNKFVCLWVIDFPMFEWSEEEGRLMAMHHPFTHPKEEDIPLLDTDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + D   Q   FE           E       FL    
Sbjct: 465 AAVRADAYDMVVNGVEVGGGSIRIHDAQLQARMFEIL-----GFTPEKAQAQFGFLMNAF 519

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 520 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 553


>gi|221234906|ref|YP_002517342.1| aspartyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|220964078|gb|ACL95434.1| aspartyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 612

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 62/190 (32%), Gaps = 23/190 (12%)

Query: 11  NRDFHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +   RR  L    + R+ +  S+R       F E  +  L   SP      R F  
Sbjct: 129 LKHRYLDLRRETLHKNIVLRSRVIQSIRNRMFAQGFNEFQTPILTASSPEG---ARDFLV 185

Query: 65  ELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
              +     +  Y L  +P+   + L+ +G ++ F  A  +R+ +       EF  L+  
Sbjct: 186 PSRLH---PEKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSLEFYQLDVE 242

Query: 124 RAHESYEQLMKDCMNIIRCAAEVA----------NQKIFSFQNVNCNPFSEPEYITVAEA 173
            +  + E +      ++    E                F+            E +T A++
Sbjct: 243 MSFVTQEDVFAAIEPVMHGVFEEFSNGKPVSPINGTHTFTNDFGQSFEHKGFERLTYAQS 302

Query: 174 FARYANIDLG 183
            A Y +    
Sbjct: 303 MAWYGSDKPD 312



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 48/155 (30%), Gaps = 11/155 (7%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +  +   +   +  I    + E  E    ++        P                  ++
Sbjct: 438 ELKLVDENQFKFCWIVDFPMFEWNEEEKKVDFSHNPFSMPQGGLEALETQDPLTIRAYQY 497

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQ 318
           ++     ELC+       P      F          Y     ++E F   L       P 
Sbjct: 498 DIVCNGYELCSGAIRNHKPEIMLKAFAT------AGYGPE-VVEEQFGGMLNAFRYGAPP 550

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G+A G DR+VML+     I EVI  P +Q  Q+
Sbjct: 551 HGGLAPGIDRIVMLLADQVAIREVIAFPLNQQGQD 585


>gi|16803559|ref|NP_465044.1| aspartyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47097016|ref|ZP_00234589.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|224501541|ref|ZP_03669848.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254829722|ref|ZP_05234377.1| aspartyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254898315|ref|ZP_05258239.1| aspartyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912193|ref|ZP_05262205.1| aspartyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936521|ref|ZP_05268218.1| aspartyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284801909|ref|YP_003413774.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995051|ref|YP_003416819.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|24212409|sp|Q8Y709|SYD_LISMO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|16410948|emb|CAC99597.1| aspartyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|47014598|gb|EAL05558.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609115|gb|EEW21723.1| aspartyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|284057471|gb|ADB68412.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060518|gb|ADB71457.1| aspartyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|293590166|gb|EFF98500.1| aspartyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 591

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 58/180 (32%), Gaps = 17/180 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIEKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 44/155 (28%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    +  +  +    L E  E              P  E        +
Sbjct: 409 ALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAERYVSAHHPFTLPKEEDIPLLETDS 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 469 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 522

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 523 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 557


>gi|25028308|ref|NP_738362.1| aspartyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259507366|ref|ZP_05750266.1| aspartate--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|23493592|dbj|BAC18562.1| putative aspartyl-tRNA synthetase [Corynebacterium efficiens
           YS-314]
 gi|259165077|gb|EEW49631.1| aspartate--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 617

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 65/188 (34%), Gaps = 22/188 (11%)

Query: 18  RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP     L  R+    + R     + F EI++ +L   +P      R F     ++   
Sbjct: 151 RRPVQANALRLRSAANKAARTVLDSHDFTEIETPTLTRSTPEG---ARDFLVPARLK--- 204

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L  AG E+ +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 205 PGTFYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQED 264

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     I+    ++   +I +              IT A+A   Y +       D    
Sbjct: 265 VIALAEEILTEVWKLIGYEIST----------PIPRITYADAMRLYGSDKPDLRFDIQIT 314

Query: 192 PDRHLLYL 199
                   
Sbjct: 315 ECTDFFAD 322



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 15/113 (13%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE----KEMQE 294
           + +P+    + +  +P       +++     E+      +     Q   F+     E + 
Sbjct: 473 FTSPKPEFLDTFDENPGEALAYAYDIVCNGNEIGGGSIRIHQRDVQERVFKVMGISEEEA 532

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + K            L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 533 RDKFG--------FLLDAFAFGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 577


>gi|269956474|ref|YP_003326263.1| aspartyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269305155|gb|ACZ30705.1| aspartyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 600

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 16/177 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R     + R       F+E+++ +L   +P      R F     +    
Sbjct: 132 RRPVSQHAMRLRAKANQAARRVLDAEDFVEVETPTLTRSTPEG---ARDFLVPARL--AP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+  G E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 187 GSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVEQDDV 246

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           +     I+    E+    I +              +T A+A   Y +        NP
Sbjct: 247 IALAERILVALWELIGVTIPT----------PIPRMTFADAMRLYGSDKPDLRFGNP 293



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +   P       +++     E+      +     Q   F+         
Sbjct: 454 FTSPHPEWIDRFEQHPGEALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFDVMGI----G 509

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G+DR+V L+T A +I +VI  P
Sbjct: 510 AAEAQEKFGFLLDAFAFGAPPHGGIAFGWDRIVALLTKAPSIRDVIAFP 558


>gi|56551611|ref|YP_162450.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|62287524|sp|Q5NPM1|SYD_ZYMMO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56543185|gb|AAV89339.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 596

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 49/149 (32%), Gaps = 11/149 (7%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
                +  +    + E  E    +         P                  ++++    
Sbjct: 424 KDSFRFCWVVDFPMFEYDEEAKQVIFSHNPFSMPQGGMEALETKDPLDILAYQYDIVCNG 483

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQSSGIAM 324
           IEL +       P      FE         Y++   +DE+F   +       P   G A 
Sbjct: 484 IELSSGAIRNHRPEIMYKAFEI------AGYDQAM-VDENFAGMINAFKYGAPPHGGAAP 536

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G DR+VML+ G  NI EV+  P +Q  ++
Sbjct: 537 GVDRMVMLLAGEPNIREVVLFPMNQKAED 565



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 59/188 (31%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R    ++ R+ + +SLR   +E  F E  +  L   SP     ++            
Sbjct: 134 RRDRLHRNIVLRSNVIASLRRRMIEQGFNEYQTPILTASSPEGARDYLVPSRVHPGKFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + ++ AG ++ F  A  +R+ +      P EF  L++  +  +  
Sbjct: 194 LPQ------APQMFKQLMMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFEMSFVT-- 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                  ++      V       F        +    I   +A   Y   D     +   
Sbjct: 246 -----QEDVFATIEPVLAGVFEEFGGGKTVTPAPFPRIAYRDAML-YYGSDKPDLRNPLK 299

Query: 191 QPDRHLLY 198
             D    +
Sbjct: 300 ISDVTEHF 307


>gi|260752796|ref|YP_003225689.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552159|gb|ACV75105.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 596

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 49/149 (32%), Gaps = 11/149 (7%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
                +  +    + E  E    +         P                  ++++    
Sbjct: 424 KDSFRFCWVVDFPMFEYDEEAKQVIFSHNPFSMPQGGMEALETKDPLDILAYQYDIVCNG 483

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQSSGIAM 324
           IEL +       P      FE         Y++   +DE+F   +       P   G A 
Sbjct: 484 IELSSGAIRNHRPEIMYKAFEI------AGYDQAM-VDENFAGMINAFKYGAPPHGGAAP 536

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G DR+VML+ G  NI EV+  P +Q  ++
Sbjct: 537 GVDRMVMLLAGEPNIREVVLFPMNQKAED 565



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 59/188 (31%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R    ++ R+ + +SLR   +E  F E  +  L   SP     ++            
Sbjct: 134 RRDRLHRNIVLRSNVIASLRRRMIEQGFNEYQTPILTASSPEGARDYLVPSRVHPGKFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + ++ AG ++ F  A  +R+ +      P EF  L++  +  +  
Sbjct: 194 LPQ------APQMFKQLMMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFEMSFVT-- 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                  ++      V       F        +    I   +A   Y   D     +   
Sbjct: 246 -----QEDVFATIEPVLAGVFEEFGGGKTVTPAPFPRIAYRDAML-YYGSDKPDLRNPLK 299

Query: 191 QPDRHLLY 198
             D    +
Sbjct: 300 ISDVTEHF 307


>gi|241761263|ref|ZP_04759351.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241374170|gb|EER63667.1| aspartyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 596

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 49/149 (32%), Gaps = 11/149 (7%)

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
                +  +    + E  E    +         P                  ++++    
Sbjct: 424 KDSFRFCWVVDFPMFEYDEEAKQVIFSHNPFSMPQGGMEALETKDPLDILAYQYDIVCNG 483

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQSSGIAM 324
           IEL +       P      FE         Y++   +DE+F   +       P   G A 
Sbjct: 484 IELSSGAIRNHRPEIMYKAFEI------AGYDQAM-VDENFAGMINAFKYGAPPHGGAAP 536

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G DR+VML+ G  NI EV+  P +Q  ++
Sbjct: 537 GVDRMVMLLAGEPNIREVVLFPMNQKAED 565



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 59/188 (31%), Gaps = 17/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R    ++ R+ + +SLR   +E  F E  +  L   SP     ++            
Sbjct: 134 RRDRLHRNIVLRSNVIASLRRRMIEQGFNEYQTPILTASSPEGARDYLVPSRVHPGKFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + ++ AG ++ F  A  +R+ +      P EF  L++  +  +  
Sbjct: 194 LPQ------APQMFKQLMMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFEMSFVT-- 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                  ++      V       F        +    I   +A   Y   D     +   
Sbjct: 246 -----QEDVFATIEPVLAGVFEEFGGGKTVTPAPFPRIAYRDAML-YYGSDKPDLRNPLK 299

Query: 191 QPDRHLLY 198
             D    +
Sbjct: 300 ISDVTEHF 307


>gi|163785825|ref|ZP_02180304.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159878906|gb|EDP72931.1| aspartyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 351

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 63/207 (30%), Gaps = 14/207 (6%)

Query: 150 KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL---QAQQAGI 206
               FQ+     F+E +   + E     A   +    D  +   R L ++    A +  I
Sbjct: 114 TEEGFQSPITKFFTEDQLQKIKEKMNAKAGDLMVFIADVHETTHRVLGFMRKHIADKLNI 173

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR------FTK 260
                  +  I    L+E  E              P  E         +          +
Sbjct: 174 VPTGRWDFLWIVDFPLLEWDEEEGRYVALHHPFTSPKEEDLPKLDKALENPEVATSIRAR 233

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            ++L     E+      +  P  Q   F      K+    E        +  L    P  
Sbjct: 234 AYDLVLNGEEIGGGSIRIHRPDIQEKLFNILGISKE----EAEEKFGFLIQALKYGAPPH 289

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            G+A G DRLV L+T + +I EVI  P
Sbjct: 290 GGLAFGLDRLVALMTDSESIREVIAFP 316


>gi|256375853|ref|YP_003099513.1| aspartyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255920156|gb|ACU35667.1| aspartyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 592

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 67/212 (31%), Gaps = 30/212 (14%)

Query: 3   QIP---SQPWWN-RDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
            +P    +      +   R R            +  R+      RE     +F+E+++ +
Sbjct: 106 PLPFQLDEHLEVGEEARLRHRYLDLRRSGPAKAMRLRSEANRIAREVLHSERFVEVETPT 165

Query: 49  LQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           L   +P      R F     +         L  SP+   + L+  G E+ +  A  +R+ 
Sbjct: 166 LTRSTPEGA---RDFLVPARL--RPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDE 220

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT L+   +    + ++     II    +                      
Sbjct: 221 DFRADRQPEFTQLDIEMSFVEQDDVIALGEKIITALWKELGDHDV---------AQPFRR 271

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           I+ AEA A+Y   D        +  +    + 
Sbjct: 272 ISYAEAMAKY-GSDKPDLRFGLELTELTEYFK 302



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
             + +P     + +  DP       +++     E+      +     Q+  F+       
Sbjct: 450 HAFTSPTPEWVDNFETDPGNALAYAYDIVCNGNEIGGGSIRIHRADVQQRAFDVMGI--- 506

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L       P   GIA G+DR+ ML++G ++I EVI  P
Sbjct: 507 -GAEEAQEKFGFLLDAFKFGAPPHGGIAFGWDRITMLLSGVDSIREVIAFP 556


>gi|120612283|ref|YP_971961.1| aspartyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|166225310|sp|A1TT99|SYD_ACIAC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120590747|gb|ABM34187.1| aspartyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 604

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 67/207 (32%), Gaps = 19/207 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R      +R +  +  FI+I++  L + +P     ++            
Sbjct: 133 RRPYMQRNLMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVPSRVHD----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +  +   
Sbjct: 188 -GQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQPEFTQIDCETSFLN--- 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                   IR   +    ++F  Q        E   +T  +A  R+   D        + 
Sbjct: 244 -----EEEIRAIFQRMVTEVFKTQLD--VDLGEFPIMTYQDAAFRF-GSDKPDLRVKLEF 295

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +   +           A +     + 
Sbjct: 296 TELTEVMKDVDFKVFSGAANMQGGRVV 322



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 45/144 (31%), Gaps = 17/144 (11%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           +    + E  E +            P                 K +++     EL     
Sbjct: 441 VVDFPMFEYDEDDARWVAVHHPFTSPKDGHEDLMDTDPGKCLAKAYDMVLNGWELGGGSV 500

Query: 277 ELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRL 329
            +     Q   F       ++ + K              L  L    P   G+A G DRL
Sbjct: 501 RIHRAEVQSKVFAALKLTPEDARAKFG----------YLLDALQYGAPPHGGLAFGLDRL 550

Query: 330 VMLVTGANNINEVIWTPFSQSNQE 353
           + L+TGA +I +VI  P +Q  Q+
Sbjct: 551 ITLMTGAESIRDVIAFPKTQRAQD 574


>gi|28385930|gb|AAH46429.1| Dars2 protein [Mus musculus]
          Length = 413

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 12/112 (10%)

Query: 240 RYPAPESALANIY----PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
            +P      ++I+      +    + ++L     E+      + D   QR+  E  ++  
Sbjct: 260 HHPFTAPNSSDIHLLYTEPEKVRGQHYDLVLNGNEIGGGSVRIHDAQLQRYILETLLK-- 317

Query: 296 KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                E   +    L  L    P   GIA+G DRLV LVTGA +I +VI  P
Sbjct: 318 -----EDVKLLSHLLQALDYGAPPHGGIALGLDRLVCLVTGAPSIRDVIAFP 364



 Score = 38.5 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 11/109 (10%)

Query: 85  SCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
             + L+  G ++ F  A  +R+       QPEFT ++   +      + +    +++   
Sbjct: 5   FKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVEQTGIQRLVEGLLQY-- 62

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
                   S+        +    +T AEA A Y   D   T       D
Sbjct: 63  --------SWPGDKDPLVTPFPSMTFAEALATY-GTDKPDTRFGMKIVD 102


>gi|183601795|ref|ZP_02963165.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683675|ref|YP_002470058.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190707|ref|YP_002968101.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196113|ref|YP_002969668.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|61679298|gb|AAX52927.1| AspRS [Bifidobacterium animalis subsp. animalis ATCC 25527]
 gi|183219401|gb|EDT90042.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621325|gb|ACL29482.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240249099|gb|ACS46039.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250667|gb|ACS47606.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295793696|gb|ADG33231.1| aspartyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 600

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 69/195 (35%), Gaps = 21/195 (10%)

Query: 4   IPSQPWWNRDFHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNET 57
           +P +    +  +   RRP +      R+ +  + R    +  F E+++   ++ +P    
Sbjct: 125 LPGEDVRLKYRYLDLRRPAMQRNIKLRSDMMRAARTELDKLGFTEVETPTMIKSTPEG-- 182

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F     +         L  SP+   + L+ AG E+ + FA  +R+ +     QPEF
Sbjct: 183 -ARDFVVPARLV--PGSWYALPQSPQLLKQLLMVAGVERYYQFARCYRDEDFRADRQPEF 239

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T L+   +    E ++     +I+   +     I +              I   EA  +Y
Sbjct: 240 TQLDMEMSFVDQEDVIAMAEQVIKAIWKADGYDIET----------PIRRIPWQEAMDKY 289

Query: 178 ANIDLGTTLDNPDQP 192
            +        N    
Sbjct: 290 GSDKPDLRFGNELIE 304



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 19/121 (15%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE-- 289
                +P         + +  DP       +++     E+      +     Q       
Sbjct: 454 WTSMHHPFTMPSKDWIDTFDEDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVL 513

Query: 290 ----KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               +E Q+K     E +             P  +GIA+G+DR V L+ GA++I +VI  
Sbjct: 514 GITPQEAQDKFGFLLEAFK---------YGAPPHAGIALGWDRTVALLAGADSIRDVIAF 564

Query: 346 P 346
           P
Sbjct: 565 P 565


>gi|323341710|ref|ZP_08081943.1| aspartate--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464135|gb|EFY09328.1| aspartate--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 583

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 48/129 (37%), Gaps = 8/129 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I + +R    E  FI++++  L   +P     ++            
Sbjct: 128 RRPVMQNKLITRARIVTEMRRTLDEMGFIDVETPMLTKSTPEGAREYLVPSRVHEGEFYA 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+  G E+ +  A  +R+ +     Q +FT ++   +    +Q
Sbjct: 188 ------LAQSPQIFKQLLMIGGLERYYQVARCFRDEDLRADRQLDFTQVDIEASFLDQQQ 241

Query: 132 LMKDCMNII 140
            M     ++
Sbjct: 242 FMSLVEEVV 250



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 51/169 (30%), Gaps = 19/169 (11%)

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
             +N       L    A+   +   +   +  +    + E  E    I         P  
Sbjct: 391 MWENTCTAVGALRLQLAKDYNLIPENTFAYCWVVDFPMFEMDED--VIIARHHPFTAPRE 448

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKI 298
           E              + ++L     E+      +     Q+  FE      ++++++   
Sbjct: 449 EDEALLNTDPLKVIAQAYDLVLNGFEIAGGSMRIYRQELQQQMFEIIGFTPEQIKKRFG- 507

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                     F+       P   GIA G DR  M +T ++ I +VI  P
Sbjct: 508 ---------FFVDAFKYGTPPHGGIAFGLDRFAMALTHSDTIRDVIAFP 547


>gi|10440131|dbj|BAB15655.1| unnamed protein product [Homo sapiens]
          Length = 250

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 72/262 (27%), Gaps = 23/262 (8%)

Query: 90  LAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           ++    ++F F   +R        H  EF M+E   +     Q +   +  +  A  +  
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFKATTMMV 60

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                     C+ F  P      E   +          +N             +QA    
Sbjct: 61  LSKCPEDVELCHKFIAPGQKDRLEHMLK----------NNFLIISYTEAVEILKQASQNF 110

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
                W         + +  + G      +  YP            D        +    
Sbjct: 111 TFTPEWGADLRTEHEKYLVKHCGNIPV-FVINYPLTLKPFYMRDNEDGPQHTVAAV---- 165

Query: 269 IELCNACDELLDPIEQRHR--FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMG 325
             L     EL     +  R  F +E   +  +      + + +L           G  +G
Sbjct: 166 DLLVPGVGELFGGGLREERYHFLEERLARSGLTE----VYQWYLDLRRFGSVPHGGFGIG 221

Query: 326 FDRLVMLVTGANNINEVIWTPF 347
           F+R +  + G +NI +VI  P 
Sbjct: 222 FERYLQCILGVDNIKDVIPFPR 243


>gi|294790954|ref|ZP_06756112.1| aspartate--tRNA ligase [Scardovia inopinata F0304]
 gi|294458851|gb|EFG27204.1| aspartate--tRNA ligase [Scardovia inopinata F0304]
          Length = 597

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 64/176 (36%), Gaps = 16/176 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  L  R+ +  + R    E  F E+++ +L   +P      R F     +    
Sbjct: 139 RRPQMQRNLKLRSNMSKAARNQLDELGFTEVETPTLIKSTPEG---ARDFVVPARLS--P 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +  S E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMSFVSQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +     +++   E A                    I+  +A  +Y +       +N
Sbjct: 254 IALAEKVVKAVWESAG----------YQVTIPFHRISWTDAMNKYGSDKPDLRFEN 299



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 35/116 (30%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPE--SALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P     +   + +  DP       +++     E+      +     Q       
Sbjct: 453 WTSMHHPFTMPSADWIDTFDQDPEHAMSDSYDIVCNGNEIGGGSVRIHRDDIQDRVLNVL 512

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                    E        L       P  +GIA G+DR   ++ G ++I +VI  P
Sbjct: 513 GI----GQEEAQDKFGFLLEAFKYGAPPHAGIAFGWDRCAAILAGEDSIRDVIAFP 564


>gi|291541528|emb|CBL14638.1| aspartyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 582

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 17/168 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
            + +    ++ R+ I + LR    E  F+EI +  L   SP     ++            
Sbjct: 134 RNPKVHNNIMIRSQIITFLRNKMNEMGFMEIQTPILSTSSPEGARDYLIPSRKHKGRFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ +G ++ F  A  +R+ +      P EF  L++  A  +  
Sbjct: 194 LPQ------APQIFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDFEMAFAT-- 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
                    +   AE    + F   +           I  AE+  +Y 
Sbjct: 246 ------QEDVFAVAEEVLYETFKKFSNKEVSKPPFARIPYAESMLKYG 287



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 17/166 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++  +          I    + E+ E    I         P            
Sbjct: 405 QIRTEVAKRLDLIDTSRFEMCFIVDFPMFERDEETNKIIFTHNPFSMPQGGLDSLLNKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
           +     ++++    +EL +      D    +  FE       +++ K             
Sbjct: 465 EEVLAYQYDIVCNGVELSSGAVRNHDIEIMKKAFELAGYSEDDLKAKFSA---------- 514

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                    P  +G+A G DR++ML+T   NI EVI  P + + Q+
Sbjct: 515 LYNAFQYGAPPHAGMAPGVDRMIMLLTEEENIREVIAFPMNSNAQD 560


>gi|289641491|ref|ZP_06473654.1| aspartyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289508701|gb|EFD29637.1| aspartyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 579

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 65/182 (35%), Gaps = 19/182 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNETHIRAFSTELIIQDHI 72
              R +  L  R+ + ++LR   V  +F+E+++  L   +P      R F          
Sbjct: 130 RRERMQRNLRTRSAVLAALRSELVPREFVEVETPLLMPSTPEG---AREFVVPSRQ---F 183

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G ++ F FA   R+ +     Q EFT L+   +    + 
Sbjct: 184 PGSFYALPQSPQLFKQLLMVGGTDRYFQFARCLRDEDLRADRQYEFTQLDIEMSFVDQDD 243

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +++     +  AA                     E IT  EA  R+  +D        + 
Sbjct: 244 VLEVISAAVLAAARAVTGGTVV----------PIERITWHEAMDRF-GVDKPDLRFGLEL 292

Query: 192 PD 193
            +
Sbjct: 293 VE 294



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 21/125 (16%)

Query: 240 RYPAPESALANIYPADPRFTKR-------FELYACNIELCNACDELLDPIEQRHRFEKEM 292
            +P       +    D   T+        ++L     EL +    + +P  Q+  F    
Sbjct: 440 HHPF---TRPHPDDLDKLETEPLAVRSRAYDLVLNGWELGSGSIRIHEPDLQQRIF---- 492

Query: 293 QEKKKIYNETYPIDEDFLACL----TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +       D  F   L       P   G A+G DRLV ++ G +NI EVI  P +
Sbjct: 493 ---ATLGISAEEADRRFGFFLTPFSYGAPPHGGFAVGIDRLVAILAGEDNIREVIAFPKT 549

Query: 349 QSNQE 353
           QS  +
Sbjct: 550 QSGLD 554


>gi|302875937|ref|YP_003844570.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
 gi|307686566|ref|ZP_07629012.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
 gi|302578794|gb|ADL52806.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
          Length = 588

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 19/167 (11%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           R LL   ++    +  ++  W  I    + E  E +  +  C      P           
Sbjct: 406 RKLLGYASETHMKQDCYEFCW--IVDFPMYEIGEESGKLEFCHNPFSMPQGGMDALMNED 463

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDE 307
            +     +++L    +EL +      DP      FE      ++++ K            
Sbjct: 464 PEKILAYQYDLVCNGVELSSGAVRNHDPEIMIKAFELVGLGEEDVKAKF----PAMY--- 516

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                     P  +GIA G DR++ML+TG  +I E+I  P +++  +
Sbjct: 517 ---NAFCYGAPPHAGIAPGVDRMIMLITGEESIREIIPFPMNKNAMD 560



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 16/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            +   +  ++ R+ I + LR    E  F+EI++  L   SP     ++          + 
Sbjct: 134 RNPNVKEKIILRSKIVADLRNRMNELGFLEINTPILTCSSPEGARDYLVPSR------NF 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
             K   L  +P+   + L+A+G ++ F  A  +R+ +      P EF  L+   A  S E
Sbjct: 188 PGKFYALPQAPQQFKQILMASGFDRYFQIAPCFRDEDARADRSPGEFYQLDMEMAFASQE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      ++    E                 +  ++I    A   Y +      +D   
Sbjct: 248 DVFSIVEEVLPPVFEKYG-------VYKTASKAPFKHIQYTTAMEVYGSDKPDLRIDLLI 300

Query: 191 QPDRHLLYL 199
           Q    ++  
Sbjct: 301 QDATEVMAD 309


>gi|194210315|ref|XP_001493136.2| PREDICTED: aspartyl-tRNA synthetase 2, mitochondrial [Equus
           caballus]
          Length = 652

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L      +   ++ ++L     E+      + D   QR+     ++       
Sbjct: 506 HPSDIQLLYT--EPEKVRSQHYDLVLNGSEIGGGSIRIHDAELQRYILATLLK------- 556

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ LVTGA +I +VI  P
Sbjct: 557 EDVKLLSHLLQALDYGAPPHGGIALGLDRLICLVTGAPSIRDVIAFP 603



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 185 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKKTPGG---AKEFVVPSREPGKF---YSLP 238

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 239 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 298

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+             +T AEA A Y   D   T       D
Sbjct: 299 LQY----------SWPRDKDPVVVPFPSMTFAEALATY-GTDKPDTRFGMKIVD 341


>gi|290968831|ref|ZP_06560368.1| aspartate--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781127|gb|EFD93718.1| aspartate--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 597

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 75/216 (34%), Gaps = 8/216 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R+ ++ ++R +   + FI+I++  L + +P     ++            
Sbjct: 140 RRPEMQHNLIMRHHVKHAMRSFLNTHGFIDIETPELCKSTPEGARDYLVPSRVNEGKFYA 199

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ +G ++ +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 200 LPQ------SPQIFKQLLMISGMDRYYQIARCFRDEDLRADRQPEFTQLDMEMSFMDQED 253

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     +++   +                    E     +   R+       T    D 
Sbjct: 254 ILSLTEEMMQYIFKETLGYELPLPIQRMTWDYAMENYGSDKPDLRFDMKFTDVTELVKDT 313

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
             +    +      ++  +    +DI  R L   +E
Sbjct: 314 DFKVFRSVIDNGGRVKAINVKGDADIPRRELDGLVE 349



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 9/162 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A++  +   +   ++ +    + E  E                 E         
Sbjct: 414 ELRKEMARRMHLIDENQFAFTWVVDFPMFEYSEEEKRYVAMHHPFTAMREEDLDKLETDP 473

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY--NETYPIDEDFLAC 312
              + K ++L    IEL      +  P  Q+  F      K       E        +  
Sbjct: 474 GHVYAKAYDLVLNGIELGGGSLRIYQPDIQQRVF------KAIGLTPEEAEQKFGFLMRA 527

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                P   G+A G DR++ML+    +I +VI  P +Q+  +
Sbjct: 528 FEYGAPPHGGLAFGLDRMIMLMLKRKSIRDVIAFPKTQNAID 569


>gi|40789249|ref|NP_060592.2| aspartyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
 gi|74758347|sp|Q6PI48|SYDM_HUMAN RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|34783643|gb|AAH45173.1| DARS2 protein [Homo sapiens]
 gi|56203852|emb|CAI20380.1| aspartyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|119611367|gb|EAW90961.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Homo
           sapiens]
 gi|119611368|gb|EAW90962.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Homo
           sapiens]
          Length = 645

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L          ++ ++L     E+      + +   QR+     ++       
Sbjct: 508 HPSDIHLLYT--EPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLK------- 558

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ LVTG+ +I +VI  P
Sbjct: 559 EDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFP 605



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 187 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGA---KEFLVPSREPGKF---YSLP 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T AE  A Y   D   T       D
Sbjct: 301 LQY----------SWPNDKDPVVVPFPTMTFAEVLATY-GTDKPDTRFGMKIID 343


>gi|330468940|ref|YP_004406683.1| asparagine synthetase A [Verrucosispora maris AB-18-032]
 gi|328811911|gb|AEB46083.1| asparagine synthetase A [Verrucosispora maris AB-18-032]
          Length = 338

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 51/340 (15%), Positives = 96/340 (28%), Gaps = 43/340 (12%)

Query: 17  RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAFSTELIIQDHIRKP 75
           + R  +  +     + RE+     F E+    +           +A   +     +    
Sbjct: 28  KTRAAMAVQQEALYAAREFLRGQGFTELLPPLIGPVTDPGARGAKALDVDFYGHTYK--- 84

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ----GCLHQPEFTMLEWYRAHESYEQ 131
             + TS     +  L     K+F  A   R           H  EF  ++   A  + E 
Sbjct: 85  --IMTSAILYKQASLRG-FPKLFYIAPNIRVEPPETVDTGRHLVEFHQIDVEIAGGTRED 141

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
            M     ++          +                        R    D     +    
Sbjct: 142 AMDTAAGLLTHVVAHVFDTVPDV--------------------LRQLGRDPLDFAELLTG 181

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALAN 250
                 + +A Q      H  +     +    E +  +   +    +  YP         
Sbjct: 182 KFDSCTHTEAVQRLRDQGHPQSPDAEINWAGEEIL--SREADRPFFITDYPKGSRGFYDR 239

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKKIYNETYPIDEDF 309
             P DP   + F+L A          EL+   E+   +   + + ++   N     D  +
Sbjct: 240 ENPQDPGVLRNFDLIAHG-----GFGELVSGSEREADYATLVTRMRESGENPA-KYDW-Y 292

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           L  +   +P S+G  MG  RLV  +TG + + +V   P  
Sbjct: 293 LRLMREGLPSSAGFGMGLQRLVRFLTGLDALWQVSAYPKL 332


>gi|163793772|ref|ZP_02187746.1| aspartyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159180883|gb|EDP65400.1| aspartyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 590

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 62/190 (32%), Gaps = 19/190 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ I +S+R   VE  F E  +  L   SP      R F     +    
Sbjct: 134 RREKVHKNIMLRSAIIASIRRRMVEQGFTEFQTPILTASSPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +    E
Sbjct: 188 PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLEMSFVEQE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      ++       +Q                  I   E+  +Y   D        +
Sbjct: 248 DVFAAVEPVLAGVFNEFSQ---------WQVPGPFPRIPYRESMLKY-GSDKPDLRIPIE 297

Query: 191 QPDRHLLYLQ 200
             D   L+ +
Sbjct: 298 IADVSELFRE 307



 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 47/155 (30%), Gaps = 11/155 (7%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
             G+          I    + E  E    I         P                  ++
Sbjct: 414 DLGLIEKDVYRLCWIVDFPMYELDEKTGKIEFSHNPFSMPQGGMEALESQDPLDILAYQY 473

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQ 318
           ++    IEL +       P      FE         Y     +D+ F   +       P 
Sbjct: 474 DVVCNGIELSSGAIRNHRPEIMYKAFEI------AGYGPE-VVDDKFAGMINAFKFGAPP 526

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             GIA G DR+VML+    N+ EVI  P +Q  ++
Sbjct: 527 HGGIAPGIDRIVMLLADVQNLREVILFPMNQRAED 561


>gi|256028558|ref|ZP_05442392.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766478|ref|ZP_06525856.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289718033|gb|EFD82045.1| aspartyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 283

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 24/170 (14%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    D  +  +    + +  E           + +P       ++   
Sbjct: 102 ALRLKIGKDLDLINKDDFKFLWVVDFPMFDYDEEE----QRYKAEHHPFTSIKAEDLDKF 157

Query: 255 DPRFTKR-----FELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPI 305
               T+      ++L     E+      + +P  Q   F++    + + K K        
Sbjct: 158 LAGQTEDIRTNTYDLVLNGSEIGGGSIRIFNPKIQSMVFDRLGLSQEEAKAKFG------ 211

Query: 306 DEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
              FL       P   G+A G DR +M++    +I +VI  P  ++N+ +
Sbjct: 212 --FFLDAFKYGAPPHGGLAFGIDRWLMVMLKEESIRDVIPFP--KTNKGQ 257


>gi|237785605|ref|YP_002906310.1| aspartyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
 gi|259511854|sp|C4LIW2|SYD_CORK4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|237758517|gb|ACR17767.1| Aspartyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 597

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 18/188 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L+ R+ +  + R   +++ F EI++ +L   +P      R F     ++   
Sbjct: 134 RRKTQHDALVLRSNVNQAARSVLLKHDFHEIETPTLTRSTPEG---ARDFLVPARLR--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G E+ F  A  +R+ +     QPEFT L+   +    + 
Sbjct: 188 PGSFYALPQSPQLFKQLLMVGGMERYFQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDD 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     I+    +     I +              +T A+A   Y +       D    
Sbjct: 248 VISVAEEILTAIWKEIGYDIPT----------PIPRMTYADAMKYYGSDKPDLRFDIKIV 297

Query: 192 PDRHLLYL 199
                   
Sbjct: 298 ECTEFFAN 305



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 52/159 (32%), Gaps = 15/159 (9%)

Query: 199 LQAQQAGIRVAHDD-----TWSDIFSRILIEKIEPNLGINCCTIL---DRYPAPESALAN 250
             A++ G+    D        + +F        E ++ +           + +P+    +
Sbjct: 406 EVARKLGLIKEGDWAFTWVVDAPLFEPAADATAEGDVALGHSAWTAVHHAFTSPKPECMD 465

Query: 251 IYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
            +  DP       +++     E+      +     Q+  F            E       
Sbjct: 466 SFDKDPGSALSYAYDIVCNGNEIGGGSIRIHRSDVQQRVFNVMGIS----DEEAQEKFGF 521

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L  +    P   GIA G+DR+V L+ G  +I +VI  P
Sbjct: 522 LLEAMKFGAPPHGGIAFGWDRIVSLLGGFESIRDVIAFP 560


>gi|228470504|ref|ZP_04055371.1| aspartyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228307800|gb|EEK16756.1| aspartyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 580

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 61/181 (33%), Gaps = 17/181 (9%)

Query: 16  YRRRPFL---LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
            RRRP L     R+ +    R Y     F+EI++  L          R F     +    
Sbjct: 127 LRRRPVLSNIELRHRMTMETRRYLDGLHFLEIETPML--IGSTPEGARDFVVPSRMN--P 182

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    + +
Sbjct: 183 GQFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQDDI 242

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +                K    +    +  +    +T  EA  RY   D        +  
Sbjct: 243 LSTFE---------GLAKHLFKEIRGIDLPTPLRRMTWYEAMDRY-GSDKPDLRFGMEIE 292

Query: 193 D 193
           +
Sbjct: 293 E 293



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 42/147 (28%), Gaps = 5/147 (3%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A + G+          +    L+E  E              P PE               
Sbjct: 406 ASELGLMKPGHYECLWVVDFPLLEWDEETQRYYAMHHPFTAPKPEDQDRLESDPGSVRAD 465

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            +++    +E+      + D   Q   F      K++            +       P  
Sbjct: 466 AYDMVINGVEVGGGSIRIHDAELQARVFAALGFTKER----AEEQFGFLMNAFKYGAPPH 521

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            GIA G DR V L+   ++I + I  P
Sbjct: 522 GGIAFGLDRWVSLMAELDSIRDCIAFP 548


>gi|158255182|dbj|BAF83562.1| unnamed protein product [Homo sapiens]
          Length = 645

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L          ++ ++L     E+      + +   QR+     ++       
Sbjct: 508 HPSDIHLLYT--EPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLK------- 558

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ LVTG+ +I +VI  P
Sbjct: 559 EDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFP 605



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 187 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGA---KEFLVPSREPGKF---YSLP 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T AE  A Y   D   T       D
Sbjct: 301 LQY----------SWPNDKDPVVVPFPTMTFAEVLATY-GTDKPDTRFEMKIID 343


>gi|320583678|gb|EFW97891.1| aspartyl-tRNA synthetase, mitochondrial [Pichia angusta DL-1]
          Length = 646

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 75/199 (37%), Gaps = 15/199 (7%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTE 65
           +    R  +Y+R   L KR  I +  R     N+F+EI++  L + +P        F   
Sbjct: 159 RYLQLRQPYYQR--SLRKRAQIAAVARRVLDANEFVEIETPLLFKSTPEG---ADEFLVP 213

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
              Q    +   L  SP+   + L+A+G ++ +  A  +R+ +     QPEFT ++   +
Sbjct: 214 TRKQ---GQFYALPQSPQQYKQLLMASGFDRYYQLAKCFRDEDLRADRQPEFTQIDLEMS 270

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF-----SEPEYITVAEAFARYANI 180
               E +M     +I+   +   Q      + + +          + ++  EA   Y  I
Sbjct: 271 FAKKEDVMHTVETVIKAIFKETRQADLFTPSEDMSSLVLSGEKPFKRLSYREAM-HYYGI 329

Query: 181 DLGTTLDNPDQPDRHLLYL 199
           D      N      +  Y 
Sbjct: 330 DKPDLRSNLRFKLLNEFYD 348



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 50/122 (40%), Gaps = 6/122 (4%)

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
                 +   +    ++        + ++L    +E+      + D   QR+  ++ ++ 
Sbjct: 508 HHPFTMFDLTQGVTPSLDNVLDVEGEHYDLVINGVEVGGGSQRIHDAQVQRYVLKEILKV 567

Query: 295 KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                     +    L  L +  P  +G A+GFDRL  ++ G++NI +V+  P +Q+  +
Sbjct: 568 HN-----AEELFGHLLKALDSGCPPHAGFAVGFDRLCSMIVGSSNIRDVVAFPKTQAGTD 622

Query: 354 EI 355
            +
Sbjct: 623 PV 624


>gi|310795348|gb|EFQ30809.1| tRNA synthetase class II [Glomerella graminicola M1.001]
          Length = 636

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 100/267 (37%), Gaps = 9/267 (3%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTE 65
           +    R FH + R  L  R  ++S++ +  V+ +F+++++  L + +       R F   
Sbjct: 109 RHLQLR-FHEQLRERLRFRAQLKSTMGQAMVDREFMDVETPILFKSTSEG---AREFIVP 164

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
                +      L  SP+   + L+A+G    + FA  +R+ +     QPEFT L+  ++
Sbjct: 165 TRRPRYA---YALPQSPQQYKQVLMASGMGGYYQFARCFRDEDHRADRQPEFTQLDMEKS 221

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             +   +M+D   ++  A +   +        +         +   E   + +  D    
Sbjct: 222 FATGVTIMEDVEYVVGRAWDTLREIYVMEVGKDSFAPVRKASLQNWEQSIQDSAKDDAKA 281

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
               + P     +L+ +       +     D+     I +++ +L  N  +++    +P 
Sbjct: 282 PIYQEYPAISTPFLRMKYTDCMDLYGSDKPDLRIPNRICRVDEHLNKNFVSMITDLESPI 341

Query: 246 SALANIYPA-DPRFTKRFELYACNIEL 271
             +  I P  D      ++     +E 
Sbjct: 342 VEVWKISPHEDVDRRDVWKFVIDFMES 368



 Score = 88.9 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 14/173 (8%)

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCC----TILDRYP----- 242
             R  LY  A +AG+    D       +   +   E    +            +P     
Sbjct: 444 ETRIALYHAAVEAGLLDRDDSFKFLWVTDFPMFTPEEEGDVGQGGASGFSATHHPFTAPH 503

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
           + E                ++L    +EL      +     Q   F   ++  +    E 
Sbjct: 504 SEEDFELLFKDPLRAKADHYDLVLNGVELGGGSRRIHIAEIQEFIFRDILKMSQDKIKE- 562

Query: 303 YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
                  L  L    P  +G A+GFDR V +++G++++ +VI  P + +  +E
Sbjct: 563 ---FSHLLKALRAGCPPHAGFAIGFDRFVAVLSGSSSVRDVIAFPKNNNGVDE 612


>gi|154294100|ref|XP_001547493.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150845057|gb|EDN20250.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 586

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/349 (13%), Positives = 105/349 (30%), Gaps = 37/349 (10%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
            + ++    R         +  R+ ++ +  + + E  F +I   +       G  T   
Sbjct: 264 MLDNRHLVLRGDTASS--VMKVRSAVEWAFAKAYKEMYFTKISPPAFVQTQVEGGST--- 318

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   D+  +  YL  S +   +  + +    ++C   ++R  +     H  E+T 
Sbjct: 319 -----LFELDYYGEKTYLTQSSQLYLETGIPS-LGNVYCIEKSFRAEKSLTRRHLSEYTH 372

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           +E       ++ L+     +I                +       PE+   A  F R   
Sbjct: 373 VEAELDFIDFDDLLDHLEEMISTVISTIMADPEIAGYIKELN---PEFQAPARPFKRMRY 429

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            D    L+  D P  +              +   + D  +     ++     IN   +L 
Sbjct: 430 SDAIDWLNAQDPPILN-----------EEGNPHVFGDDIAEAAERRM--TDIINLPILLT 476

Query: 240 RYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
            +P    +      P DPR T+  ++    +       E++    +   +E+ M   ++ 
Sbjct: 477 HFPVEIKAFYMKKDPQDPRVTESVDVLMPGV------GEIVGGSMRMEGYEELMAAYERE 530

Query: 299 YNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                                 G  +G +R +  +   +++      P 
Sbjct: 531 GISPKEYYWYTEQRKYGTSPHGGYGLGLERFIAWICKQHSVRTCCLYPR 579


>gi|125624982|ref|YP_001033465.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166225352|sp|A2RN94|SYD_LACLM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|124493790|emb|CAL98782.1| AspS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071781|gb|ADJ61181.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 590

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 49/180 (27%), Gaps = 18/180 (10%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCTIL 238
           D    L   D  D     L A +  I           F+ +      +          + 
Sbjct: 382 DNDLVLFVADSLDVANSALGALRLTIGKQQGLIDFRKFNFLWVIDWPMFEWSDEEERYMS 441

Query: 239 DRYPAPESALANI-------YPADPR----FTKRFELYACNIELCNACDELLDPIEQRHR 287
             +P                +  D          +++     EL      +     Q   
Sbjct: 442 AHHPFTLPTKETQAFLSADGHRKDSDLKKVRAHAYDIVLNGYELGGGSLRINSRDLQEEM 501

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 + +    +        L  L    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 502 LSALGFKLE----DANEQFGFLLEALDYGFPPHGGLALGLDRFVMLLAGKDNIREVIAFP 557



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 70/216 (32%), Gaps = 14/216 (6%)

Query: 16  YRRRPFLL---KRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR   L     R+    S+REY     FI++++  L   +P     ++           
Sbjct: 132 LRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARDYLVPSRVNKGEFY 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    E
Sbjct: 192 ALPQ------SPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQPEFTQVDLETSFLGEE 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFS--FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           ++ +    +I    +       +  F  +N +           +        DL      
Sbjct: 246 EIQELTEELIAKVMKDVKGIDVTLPFPRMNYDDAMNFYGSDKPDTRFELLLTDLSALAKT 305

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            D           +   ++ A D        ++  +
Sbjct: 306 VDFKVFQEA-EVVKAIVVKGAADKYSRKSIDKLTEQ 340


>gi|116512888|ref|YP_811795.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025168|sp|Q02WJ0|SYD_LACLS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116108542|gb|ABJ73682.1| aspartyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 590

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 49/180 (27%), Gaps = 18/180 (10%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL--IEKIEPNLGINCCTIL 238
           D    L   D  D     L A +  I           F+ +      +          + 
Sbjct: 382 DNDLVLFVADSLDVANSALGALRLTIGKQQGLIDFRKFNFLWVIDWPMFEWSDEEERYMS 441

Query: 239 DRYPAPESALANI-------YPADPR----FTKRFELYACNIELCNACDELLDPIEQRHR 287
             +P                +  D          +++     EL      +     Q   
Sbjct: 442 AHHPFTLPTKETQAFLSADGHRKDSDLKKVRAHAYDIVLNGYELGGGSLRINSRDLQEEM 501

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                 + +    +        L  L    P   G+A+G DR VML+ G +NI EVI  P
Sbjct: 502 LSALGFKLE----DANEQFGFLLEALDYGFPPHGGLALGLDRFVMLLAGKDNIREVIAFP 557



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 70/216 (32%), Gaps = 14/216 (6%)

Query: 16  YRRRPFLL---KRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR   L     R+    S+REY     FI++++  L   +P     ++           
Sbjct: 132 LRRPEMLKNITMRHATTRSIREYLDGAGFIDVETPFLNKSTPEGARDYLVPSRVNKGEFY 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    E
Sbjct: 192 ALPQ------SPQLMKQLLMTAGLDRYYQIVKCFRDEDLRGDRQPEFTQVDLETSFLGEE 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFS--FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           ++ +    +I    +       +  F  +N +           +        DL      
Sbjct: 246 EIQELTEELIAKVMKDVKGIDVTLPFPRMNYDDAMNFYGSDKPDTRFELLLTDLSALAKT 305

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            D           +   ++ A D        ++  +
Sbjct: 306 VDFKVFQEA-EVVKAIVVKGAADKYSRKSIDKLTEQ 340


>gi|240280743|gb|EER44247.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus H143]
 gi|325089000|gb|EGC42310.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 591

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 58/418 (13%), Positives = 111/418 (26%), Gaps = 84/418 (20%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFV-ENQ--FIEIDSMSLQYS 52
           + QIP         H R R          R+     L + F  +    F+++    +  S
Sbjct: 180 LRQIP---------HLRLRTPFNSLLSRFRSESIFQLGQVFRFQLGGSFVQVQPPLITSS 230

Query: 53  -PGNETHIRAFSTELIIQDH-----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
                  +        +         R P YL  S +   +   AA    ++  +  +R 
Sbjct: 231 DCEGAGEVFTVVPGDKVDGAEVGEFFRSPKYLTVSSQLHLEAY-AAELGNVWALSPTFRA 289

Query: 107 GEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
            +     H  EF MLE         Q +    +I+        ++++          ++ 
Sbjct: 290 EKSDTPRHLSEFYMLEVEMNFV---QSVDSLTDIVESLIRDLTKRLYETPVAEEIFTAKR 346

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQP------DRHLLYLQAQQAGIRVAHDDTWSDIFS 219
              + AE   +   +     ++    P         LL    Q           W +   
Sbjct: 347 TGESGAEKVDKGLRLRWLGIMEGEKWPRITYTSAIELLQKAVQSKATIFNFPPVWEEGLQ 406

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALAN--------------IYPADPRFTKRFELY 265
               + I   +G      +  YP                      +        +  E  
Sbjct: 407 LEHEKFIVDEIGKGRPVFVTHYPKKVKPFYMAPSVVADESSSSSPVEVPHHDPLQTRETV 466

Query: 266 ACNIELCNACDELLDPIEQRHRF--EKEM--------QEKKKIYN--------------- 300
           AC   L     E++    +  R     +         ++ +   +               
Sbjct: 467 ACFDLLMPEISEVVGGSIREQRLPNLIQNMREHGLLKKKLEAGSDADNASSSTHSISESS 526

Query: 301 -ETYPI---DEDF-----LACLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              YP    DE        A L         G  +GFDR +  + G +++ +V+  P 
Sbjct: 527 SPVYPYLQPDEHLGSIQWYADLRRWGSAPHGGFGLGFDRYLGYLAGVSSLRDVVPFPR 584


>gi|299747321|ref|XP_001836954.2| aspartyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|298407466|gb|EAU84571.2| aspartyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 687

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 24/146 (16%)

Query: 2   HQIPSQPWWNRDFHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMS-LQYS 52
           H +PS+   +    YR    RR  L     KR+ +   +R    +  F E+++   L+ S
Sbjct: 183 HNLPSE---DLRARYRFLDLRRTALSSNIKKRSKVAHIIRSTLHDQGFTEVETPVLLRSS 239

Query: 53  PGNETHIRAFSTELIIQDHIRK------PLY--LQTSPEFSCKKLLA-AGEEKIFCFAHA 103
           P      R F       +H         PL+  LQ SP+   + L+   G +K F  A  
Sbjct: 240 PEG---AREFLVPTRQSNHSDASPRESDPLFYALQQSPQQPKQLLICSGGVDKYFQIAKC 296

Query: 104 WRNGEQGCLHQPEFTMLEWYRAHESY 129
           +R+ +     QPEFT ++   A  S+
Sbjct: 297 FRDEDGRKDRQPEFTQVDLEMAFVSW 322



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 13/166 (7%)

Query: 197 LYLQAQQAG---IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           ++  AQ+ G   +       W   F     +  +     +       +P       +I  
Sbjct: 498 IFETAQKRGDVTVTEEPHFLWITEFPLFTHDDSDKEFLAHGRWSSSHHPFTAPMWQDIDA 557

Query: 254 ADPRFTKR-----FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                 +      ++L    +E+      + D   Q + F + +Q       E  P    
Sbjct: 558 LYKGDIEHVRGQHYDLVLNGVEIGGGSVRIHDATMQDYIFTQVLQLS---DQEKAPF-NH 613

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            L  L    P   GIA+GFDRL+ ++    +I +VI  P S   ++
Sbjct: 614 LLHALRCGAPPHGGIALGFDRLMAMLCKTQSIRDVIAFPKSSGGKD 659


>gi|255656726|ref|ZP_05402135.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296452447|ref|ZP_06894148.1| aspartate--tRNA ligase [Clostridium difficile NAP08]
 gi|296877796|ref|ZP_06901822.1| aspartate--tRNA ligase [Clostridium difficile NAP07]
 gi|296258777|gb|EFH05671.1| aspartate--tRNA ligase [Clostridium difficile NAP08]
 gi|296431247|gb|EFH17068.1| aspartate--tRNA ligase [Clostridium difficile NAP07]
          Length = 595

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 18/174 (10%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ + +  R Y   N+F EI++  L   +P     ++            + +     
Sbjct: 146 LKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEGARDYLVPSRVNPGKFYALPQ----- 200

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E +M     +
Sbjct: 201 -SPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDVMSMIEGL 259

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           +    +       +              +T AEA +RY   D   T    +  D
Sbjct: 260 LEVIFKEVLDVELT---------LPLPKMTYAEAMSRY-GSDKPDTRFGYELTD 303



 Score = 91.6 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 45/137 (32%), Gaps = 14/137 (10%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-----FTKRFELYACNIELC 272
              +    +              +P       ++   +         K +++     E+ 
Sbjct: 431 LLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKASLRAKAYDIVLNGYEIG 490

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQSSGIAMGFDRL 329
                + +   Q   F      K   + E    ++    L       P  +G+A G DRL
Sbjct: 491 GGSVRISNSDVQSRMF------KALGFTEERANEKFGYLLEAFKYGTPPHAGLAFGLDRL 544

Query: 330 VMLVTGANNINEVIWTP 346
           VML+ GA+NI EVI  P
Sbjct: 545 VMLLAGADNIREVIAFP 561


>gi|139438291|ref|ZP_01771844.1| Hypothetical protein COLAER_00833 [Collinsella aerofaciens ATCC
           25986]
 gi|133776488|gb|EBA40308.1| Hypothetical protein COLAER_00833 [Collinsella aerofaciens ATCC
           25986]
          Length = 595

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 29/202 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRA 61
           D   R R            L  R+    ++RE     +F+E+++ SL + +P      R 
Sbjct: 134 DTRLRYRYLDLRRPEMMANLKLRSDFTFAIREALHNREFMEVETPSLFKSTPEG---ARD 190

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     IQ       Y L  SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 191 FIVPSRIQ---PGNFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQPEFTQV 247

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +      +M     ++  A      ++ +              +   EA   Y   
Sbjct: 248 DIEMSFVDQNDVMSALEEVLADAFGRMGVEMPT----------PLRRMDYWEAMDTY-GS 296

Query: 181 DLGTTLDNPDQPDRHLLYLQAQ 202
           D   T       D   ++  ++
Sbjct: 297 DKPDTRYGMHLVDLTDIFANSK 318



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 47/159 (29%), Gaps = 16/159 (10%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A    I+    D    + +  L    E              P                + 
Sbjct: 425 ANALEIKREGHDFLW-VVNFPLFHWDEDRKAYAAEHQPFTLPTETDIAKIEADPLAAGSC 483

Query: 261 RFELYACNIELCNACDELLDPIEQRHR-----FEKEMQEKKKIYNETYPIDEDFLACLT- 314
            ++      E       + +   Q        F +E  E +             +  L  
Sbjct: 484 TYDFVMDGFEAGGGGMRIHNAEMQMSMLKLLGFTEERAESQFG---------FLMEALKF 534

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   G A+G DR+ ML+TG+++I +V+  P + S  +
Sbjct: 535 GAPPMGGFALGLDRVCMLLTGSDSIRDVMAFPKTASGSD 573


>gi|148552972|ref|YP_001260554.1| aspartyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148498162|gb|ABQ66416.1| aspartyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 593

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 64/189 (33%), Gaps = 17/189 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + +S+R   ++  F E  +  L   SP      R F     I    
Sbjct: 135 RRDRIHANIVLRSNVIASIRRRMIDQGFTEYQTPILTASSPEG---ARDFLVPSRIH--- 188

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L++  +  +  
Sbjct: 189 PGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFEMSFVT-- 246

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                  ++      V +     F N      +    I   +A  RY   D     +  +
Sbjct: 247 -----QEDVFAAIEPVLHGVFEEFANGRAVTPAPFPRIAYRDAMLRY-GSDKPDLRNPLE 300

Query: 191 QPDRHLLYL 199
             D    + 
Sbjct: 301 ITDVTEHFQ 309



 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 54/156 (34%), Gaps = 11/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +    + E  E    I+        P  E               +
Sbjct: 418 EELGLIEQGVFKFCWVVDFPMFEYDEDAKKIDFSHNPFSMPQGEMEALETMDPLDILAYQ 477

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMP 317
           +++    +EL +       P      FE         Y++   ++E+F   L       P
Sbjct: 478 YDIVCNGVELSSGAIRNHRPEIMYKAFEI------AGYSQEQ-VEENFSGMLNAFKFGAP 530

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G A G DR+VML+    NI EV+  P +Q  ++
Sbjct: 531 PHGGSAPGIDRIVMLLADEPNIREVVLFPMNQKAED 566


>gi|333025634|ref|ZP_08453698.1| putative aspartyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332745486|gb|EGJ75927.1| putative aspartyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 587

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG        +  +    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRAGHFEEGVFRFCWVVDFPMFEKDEETGKIDFSHNPFSMPQGGMDALEHKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    IEL +      +P      FE    +++ + +E   +    L    
Sbjct: 465 LDILAWQYDIVCNGIELSSGAIRNHEPAIMLKAFEIAGYDRETVEHEFAGM----LRAFR 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 521 LGAPPHGGIAPGIDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 23/224 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R  + +++R+  V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRTAVIAAVRQKMVALGFNEMATPILTATSPEG---ARDFVVPSRLN--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            +   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GRFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
                   +    E    ++F+         S    I   E+  +Y N   DL   L+  
Sbjct: 245 ----EQEDVFQPVEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRAQLELH 300

Query: 190 DQPDRHLLYLQAQQAGIRVAH------DDTWSDIFSRILIEKIE 227
           D  D          AG  V               F ++    +E
Sbjct: 301 DISDVFASSEFKAFAGKHVRALPVPDTAKQSRKFFDQLGEYAVE 344


>gi|47094595|ref|ZP_00232243.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47017030|gb|EAL07915.1| aspartyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
          Length = 467

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 58/180 (32%), Gaps = 17/180 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 11  RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 70

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 71  LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 124

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 125 IQAITEDMLVDVVKEA---------KNITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 175



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 45/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +    +  +  +    L E  E              P  E        +
Sbjct: 285 ALRNKLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 344

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 345 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 398

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 399 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 433


>gi|72162485|ref|YP_290142.1| aspartyl-tRNA synthetase [Thermobifida fusca YX]
 gi|97196980|sp|Q47N50|SYD_THEFY RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|71916217|gb|AAZ56119.1| aspartyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 579

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 84/298 (28%), Gaps = 14/298 (4%)

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
           R F     ++       +    P+    + L    +  F     +R  +   +       
Sbjct: 264 RPFR---RMKFAEAMDRFGTDKPDLRFGQELVELTD--FFANTPFRVFQAPYVGAVVMPG 318

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
                  E             +  A V   +  +         SE E   +AE       
Sbjct: 319 GASQTRRELDAWQEWARSRGAKGLAYVLVHEDGTLGGPVAKNLSEEERAGLAERVGAKPG 378

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
            D            + LL     + G R    D  +     I    +         T + 
Sbjct: 379 -DAIFFSAGERTASQELLGAARLEIGKRCGLIDESAWEVLWITDMPMFEKDDEGGWTSVH 437

Query: 240 RY---PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                PA E A            + F+L     EL +    +     Q+  F+     K 
Sbjct: 438 HPFTAPAQEVADTFHNDPGSATARAFDLVMNGYELASGSIRIHRAEMQQRVFDTIGLSK- 496

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              +E        L       P   G+A+G+DRLVML+ G + I +VI  P + S  +
Sbjct: 497 ---DEAETKFGFLLEAFQFGPPPHGGLAVGWDRLVMLLAGQSTIRDVIAFPKTASGAD 551



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 62/237 (26%), Gaps = 21/237 (8%)

Query: 3   QIPSQPWWNRD----FHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMS 48
            +P     N++       R R            L  R+       E   +N F+ +++  
Sbjct: 103 PLPFPLDGNQEISEEARLRYRYLDMRRPETAEALRVRSRATYIAHEVMNDNGFVYVETPY 162

Query: 49  LQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           L   +P      R F   + +Q        L  SP+   + L+  G E+ +     +R+ 
Sbjct: 163 LTRSTPEG---ARDFLVPVRLQ--PGHWYALPQSPQLFKQLLMVGGMERYYQLTRCFRDE 217

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT ++   +    E L      +                          + 
Sbjct: 218 DFRADRQPEFTQIDIEMSFVDEEDLFDIGEKLFTRLLREVRGVELPRPFRRMKFAEAMDR 277

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
               +   R+   +L    D        +       A +                  
Sbjct: 278 FGTDKPDLRF-GQELVELTDFFANTPFRVFQAPYVGAVVMPGGASQTRRELDAWQEW 333


>gi|297281534|ref|XP_001101931.2| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Macaca mulatta]
          Length = 637

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L          ++ ++L     E+      + +   QR+     ++       
Sbjct: 500 HPSDIHLLYT--EPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLK------- 550

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ LVTG+ +I +VI  P
Sbjct: 551 EDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFP 597



 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 52/176 (29%), Gaps = 31/176 (17%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYS----PGNETHIRAFSTELIIQDHIRKPLY 77
           L  R+ +   +REY             L  S    P      + F               
Sbjct: 187 LRLRSQMVMKMREYLCN----------LHASGQMLPEG---AKEFLVPSREPGKF---YS 230

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +     
Sbjct: 231 LPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIE 290

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
            +++           S+ N           +T  EA A Y   D   T       D
Sbjct: 291 GLLQY----------SWPNDKDPVVVPFPTVTFTEALATY-GTDKPDTRFGMKIID 335


>gi|325001175|ref|ZP_08122287.1| aspartyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 614

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 31/206 (15%)

Query: 3   QIP---SQPWW------NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMS 48
            +P    +             +   R       +  R+ +  + R+      FIE+++ +
Sbjct: 106 PLPFPIDEHTGVGEEIRLTHRYLDLRRSGPASAMKLRSDVNKAARDVLAAEDFIEVETPT 165

Query: 49  LQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           L   +P      R F     +         L  SP+   + L+  G E+ +  A  +R+ 
Sbjct: 166 LTRSTPEG---ARDFVVPARL--RPGSWYALPQSPQLFKQLLMVGGLERYYQIARCYRDE 220

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT L+   +    + ++     ++    ++             +  +    
Sbjct: 221 DFRADRQPEFTQLDIEMSFVEQDDVIALAEKVLVALWKLVG----------YDIPAPIPR 270

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPD 193
           ++ AEA +RY   D        +  +
Sbjct: 271 MSYAEAMSRY-GSDKPDLRFGFELTE 295



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 15/115 (13%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEK----EM 292
             + +P     + +   P       +++     E+      + D   Q+  FE     E 
Sbjct: 450 HAFTSPTPDWIDTFEQSPGEALAYAYDIVCNGNEIGGGSIRIHDADVQKRVFEIMGLSEA 509

Query: 293 QEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + K+K            L       P   GIA G+DR+  L+ G ++I EVI  P
Sbjct: 510 EAKEKFG--------FLLDAFSYGPPPHGGIAFGWDRITALLAGVDSIREVIAFP 556


>gi|255030480|ref|ZP_05302431.1| asparaginyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 363

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAF 62
           +  +  W R    R+   +  RN I  +  E+F +  F++ID   L   +P         
Sbjct: 114 MDHRHLWLRSN--RQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEG------- 164

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +TEL    +  +  +L  S +    +  A    K+F F   +R  +     H  EF M+E
Sbjct: 165 TTELFHTKYFEEDAFLSQSGQLYM-EAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIE 223

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIF-------SFQNVNCNPFSEPEYITVAEAF 174
              A    E  ++   N +    +                 +      +    IT  EA 
Sbjct: 224 PEMAFYKLEDSLQVQENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPRITYTEAI 283

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQ 200
            R   +     +   D    H   + 
Sbjct: 284 ERLHELGFDDIVWGDDFGAPHETAIA 309


>gi|239980703|ref|ZP_04703227.1| aspartyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291452562|ref|ZP_06591952.1| aspartyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291355511|gb|EFE82413.1| aspartyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 594

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 55/160 (34%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A+++G    +   +  I    + EK E    I         P            
Sbjct: 405 AVRVEAAKRSGHFEENVFRFCWIVDFPMYEKDEETGKIEFSHNPFSMPQGGMQDLEEKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    IEL +      +P      FE    E++ +  E   +    L    
Sbjct: 465 LDILAWQYDIVCNGIELSSGAIRNHEPEVMLKAFEIAGYERETVEREFAGM----LRAFR 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 521 LGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 62/185 (33%), Gaps = 19/185 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R  + S++R       F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILAATSPEG---ARDFVVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
                    +    E    ++F+         S    I   E+  +Y N   DL   L+ 
Sbjct: 245 -----EQEDVFRPIEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRAQLEL 299

Query: 189 PDQPD 193
            D  D
Sbjct: 300 VDITD 304


>gi|254390363|ref|ZP_05005580.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294813842|ref|ZP_06772485.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326442260|ref|ZP_08216994.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197704067|gb|EDY49879.1| aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326441|gb|EFG08084.1| Aspartyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 593

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 55/160 (34%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A+++G        +  I    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRSGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMKDLEEKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    IEL +      +P      FE    E++ +  E   +    L    
Sbjct: 465 LDILAWQYDIVCNGIELSSGAIRNHEPEIMLKAFEIAGYERETVEREFAGM----LRAFR 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 521 LGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 70/225 (31%), Gaps = 25/225 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R  + S++R       F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILAATSPEG---ARDFVVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
                    +    E    ++F       +  S    I   EA  +Y +   DL   L+ 
Sbjct: 245 -----EQEDVFQPVEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRARLEL 299

Query: 189 PDQPDRHLLYLQAQQAGIRVAH------DDTWSDIFSRILIEKIE 227
            D  D          AG  V               F ++    +E
Sbjct: 300 VDITDVFEGSAFKAFAGKHVRALPVPDVSAQPRKFFDQLGEYAVE 344


>gi|329942396|ref|ZP_08291206.1| aspartyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|332287037|ref|YP_004421938.1| aspartyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|313847634|emb|CBY16622.1| putative aspartyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|325507318|gb|ADZ18956.1| aspartyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|328815306|gb|EGF85294.1| aspartyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328914269|gb|AEB55102.1| aspartyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 584

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 19/183 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLY 77
             L+ R+ +  + R+Y  +  F E+ +  L + +P     ++            + +   
Sbjct: 142 DRLVCRHKVMMACRQYMDKQGFTEVVTPILGKSTPEGARDYLVPSRIYPGSFYALPQ--- 198

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+  G ++ F  A  +R+ +     QPEF  ++   +  +   L     
Sbjct: 199 ---SPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQPEFAQIDIEMSFATPNDLFPIIE 255

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            ++     V                     +T  EA   Y   D           D    
Sbjct: 256 QLVVEMFAVQG----------IKIDLPLPRMTYQEAKDLY-GTDKPDLRFGLQLHDCREH 304

Query: 198 YLQ 200
             +
Sbjct: 305 AKE 307



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 59/187 (31%), Gaps = 35/187 (18%)

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
             D  +L L A    +     D    + ++      E       C  +  +P        
Sbjct: 386 AEDNDILLLIAAPEDVANQSLDHLRRLIAKERNLYNESQYN---CVWITDFPLFAKEDGK 442

Query: 251 IYPADPRFTKR-------------------FELYACNIELCNACDELLDPIEQRHRFEKE 291
           I      FT                     ++L     E+ +    + +   Q   F   
Sbjct: 443 ICSEHHPFTSPLDEDIPLLDKDPLSVRSSSYDLVLNGYEIASGSQRIHNADLQNKIFSIL 502

Query: 292 MQ----EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  K+K           F+  L+   P   GIA+G DR++M++TGA  I EVI  P
Sbjct: 503 ELSPESIKEKFG--------FFIDALSFGTPPHLGIALGLDRIMMVLTGAEGIREVIAFP 554

Query: 347 FSQSNQE 353
            +Q   +
Sbjct: 555 KTQKAAD 561


>gi|119595467|gb|EAW75061.1| asparaginyl-tRNA synthetase 2 (mitochondrial)(putative), isoform
           CRA_a [Homo sapiens]
          Length = 250

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 72/262 (27%), Gaps = 23/262 (8%)

Query: 90  LAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           ++    ++F F   +R        H  EF M+E   +     Q +   +  +  A  +  
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFKATTMMV 60

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                     C+ F  P      E   +          +N             +QA    
Sbjct: 61  LSKCPEDVELCHKFIAPGQKDRLEHMLK----------NNFLIISYTEAVEILKQASQNF 110

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
                W         + +  + G      +  YP            D        +    
Sbjct: 111 TFTPEWGADLRTEHEKYLVKHCGNIPV-FVINYPLTLKPFYMRDNEDGPQHTVAAV---- 165

Query: 269 IELCNACDELLDPIEQRHR--FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMG 325
             L     EL     +  R  F +E   +  +      + + +L           G  MG
Sbjct: 166 DLLVPGVGELFGGGLREERYHFLEERLARSGLTE----VYQWYLDLRRFGSVPHGGFGMG 221

Query: 326 FDRLVMLVTGANNINEVIWTPF 347
           F+R +  + G +NI +VI  P 
Sbjct: 222 FERYLQCILGVDNIKDVIPFPR 243


>gi|256371344|ref|YP_003109168.1| aspartyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007928|gb|ACU53495.1| aspartyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 588

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 58/182 (31%), Gaps = 19/182 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              R +  L  R    +++R       F+E+++  L   +P      +    T+      
Sbjct: 136 RRARMQRNLRARAATNAAIRRAMEAQGFVEVETPLLWTPTPEGAREFLVPSRTQPGSVYS 195

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+ + + L+  G ++ +  A   R+ +     Q EFT L+   +  + E 
Sbjct: 196 LPQ------SPQIAKQLLMIGGVDRYYQIARCLRDEDLRADRQFEFTQLDLEASFVTQED 249

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +       IR                          IT  EA  R+   D        + 
Sbjct: 250 VRSFVSAAIREVIRSVRG----------VDDVPIGTITWHEAMTRW-GSDKPDRRFGMEL 298

Query: 192 PD 193
            D
Sbjct: 299 VD 300



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 43/124 (34%), Gaps = 19/124 (15%)

Query: 240 RYPAPESALANIYPADPR----FTKRFELYACNIELCNACDELLDPIEQRHRF-----EK 290
            +P       ++   +       ++ ++L     EL +    +  P  Q   F     ++
Sbjct: 443 HHPFTMPHADDMDLLEREPLRVRSQSYDLVMNGWELGSGSIRIHRPDLQAQIFGLLGLDE 502

Query: 291 EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           +    +             L       P   G A G DRLV L+ G   I EVI  P +Q
Sbjct: 503 QAAADRFG---------FLLDAFRFGPPPHGGFAFGIDRLVALLLGEETIREVIAFPKTQ 553

Query: 350 SNQE 353
           S Q+
Sbjct: 554 SGQD 557


>gi|296284766|ref|ZP_06862764.1| aspartyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 606

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 67/189 (35%), Gaps = 15/189 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              R    ++ RN + +SLR   ++  F E  +  L   SP     ++            
Sbjct: 134 RRERVHNNIMLRNKVITSLRRRMIDQGFSEFQTPILGASSPEGARDYLVPSRLHPGRFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      +P+   + L+ AG ++ F  A  +R+ +      PEF  L++  +  + E 
Sbjct: 194 LPQ------APQMFKQLLMVAGFDRYFQIAPCFRDEDLRADRSPEFYQLDFEMSFVTQED 247

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++    E  +         +  P  E   I  AEA  +Y   D     +    
Sbjct: 248 VFQAIEPVLAGVFEEFSG------GKSVTPAGEFPRIPYAEAMLKY-GSDKPDLRNPIII 300

Query: 192 PDRHLLYLQ 200
            D    + +
Sbjct: 301 TDVTHHFEK 309



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 47/144 (32%), Gaps = 11/144 (7%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           +  I    + E  E    I+        P  E               ++++     EL +
Sbjct: 429 FCWIVDFPMFEYDEDQKRIDFSHNPFSMPQGEMDALENQDPLEIKAWQYDIVCNGYELSS 488

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRL 329
                  P      FE     K+        +D +F   +       P   G A G DR+
Sbjct: 489 GAIRNHRPDIMYKAFEVAGYSKE-------DVDANFSGMIEAFKLGAPPHGGSAPGIDRI 541

Query: 330 VMLVTGANNINEVIWTPFSQSNQE 353
           VML+    NI EVI  P +Q  Q+
Sbjct: 542 VMLLADEPNIREVIAFPMNQRAQD 565


>gi|221194735|ref|ZP_03567792.1| aspartyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185639|gb|EEE18029.1| aspartyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 609

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 67/182 (36%), Gaps = 19/182 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
              R    L  R+    +LRE F +  F E+++ +L + +P      R F     +Q   
Sbjct: 159 RRPRMARNLRLRSDFTFALREAFHKRDFTEVETPALFKSTPEG---ARDFLVPSRMQGG- 214

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + + 
Sbjct: 215 --SFYALPQSPQLLKQLLMIGGVERYYQVAKCFRDEDLRADRQPEFTQVDTEMSFVTQDD 272

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M +  +I+  A                   +    +   +A   Y   D   T    + 
Sbjct: 273 VMSELEDILSDAFGKMG----------IQMQTPLRRMQYWDAMDTY-GTDKPDTRFGMEL 321

Query: 192 PD 193
            D
Sbjct: 322 HD 323



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 43/138 (31%), Gaps = 5/138 (3%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
               +  + +  L    E         +    P  +             +  ++      
Sbjct: 447 EGHDFLWVVNFPLFHWDEETQSYASEHMPFTQPNEDQIDLLDADPLSIGSHTYDFVMDGF 506

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDR 328
           E       + +   Q    EK    K++   E        +  L    P   G A+G DR
Sbjct: 507 EAGGGGMRIHNADLQLRILEKLGFTKERA--EAQF--GFLMEALTYGAPPMGGFALGLDR 562

Query: 329 LVMLVTGANNINEVIWTP 346
           + ML+ GA++I +V+  P
Sbjct: 563 VCMLLAGADSIRDVMAFP 580


>gi|326318349|ref|YP_004236021.1| aspartyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375185|gb|ADX47454.1| aspartyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 604

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 20/184 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R      +R +  +  FI+I++  L + +P     ++            
Sbjct: 133 RRPYMQRNLMLRYKTAIQVRNFLDKEGFIDIETPMLGKSTPEGARDYLVPSRVHD----- 187

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +      
Sbjct: 188 -GQFFALPQSPQLYKQMLMVAGYDRYYQITKCFRDEDLRADRQPEFTQIDCETSF----- 241

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
                   IR   +    ++F  Q        E   +T  +A  R+ +   DL   L+  
Sbjct: 242 ---LGEEEIRAIFQRMVTEVFKTQLD--VDLGEFPIMTYQDAAFRFGSDKPDLRVKLEFT 296

Query: 190 DQPD 193
           +  D
Sbjct: 297 ELTD 300



 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+   +      +    + E  E +            P                 K 
Sbjct: 427 KKNGL-FENVWAPLWVVDFPMFEYDEDDARWVAVHHPFTAPKDGHEDLMDTDPGRCIAKA 485

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL-T 314
           +++     EL      +     Q   F       ++ + K              L  L  
Sbjct: 486 YDMVLNGWELGGGSVRIHRAEVQSKVFAALKLTPEDARAKFG----------YLLDALQY 535

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   G+A G DRL+ L+TGA +I +VI  P +Q  Q+
Sbjct: 536 GAPPHGGLAFGLDRLITLMTGAESIRDVIAFPKTQRAQD 574


>gi|255505602|ref|ZP_05347140.3| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255266878|gb|EET60083.1| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 593

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 57/166 (34%), Gaps = 17/166 (10%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           R +L            ++  W  I    + E  E +  +  C      P           
Sbjct: 409 RKMLGAACPAHMKTDRYEFCW--IVDFPMYEIGEESGELEFCHNPFSMPQGGMKALEEQE 466

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDE 307
                  +++L    +EL +      DP      F      E +++ K            
Sbjct: 467 PLEILAYQYDLVCNGVELSSGAVRNHDPEIMVKAFNLVGLGEDDVKAKF----PAM---- 518

Query: 308 DFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            + A     P  +GIA G DR+VML+ G  +I E+I  P +++ Q+
Sbjct: 519 -YNAFCYGAPPHAGIAPGVDRMVMLIAGEESIREIIPFPMNKNAQD 563



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 63/191 (32%), Gaps = 17/191 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            +   +  +  R+ I + LR   + + F+EI +  L   SP     ++            
Sbjct: 137 RNPAVKDKITLRSKIVADLRASMIAHDFLEITTPILTCSSPEGARDYLVPSRNHPGKFYA 196

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+A+G ++ F  A  +R+ +      P EF  L+   A    E
Sbjct: 197 LPQ------APQQFKQLLMASGFDRYFQIAPCFRDEDARADRSPGEFYQLDMEMAFADQE 250

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +     +++                 +    +  + I+  EA  +Y   D      +  
Sbjct: 251 DVFAILEDVLPPIFAKYG-------VYHTASAAPFKRISYLEAMEQY-GTDKPDLRIDLL 302

Query: 191 QPDRHLLYLQA 201
             D        
Sbjct: 303 VQDATACMADC 313


>gi|229817226|ref|ZP_04447508.1| hypothetical protein BIFANG_02486 [Bifidobacterium angulatum DSM
           20098]
 gi|229785015|gb|EEP21129.1| hypothetical protein BIFANG_02486 [Bifidobacterium angulatum DSM
           20098]
          Length = 599

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 72/192 (37%), Gaps = 21/192 (10%)

Query: 4   IPSQPWWNRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNET 57
           +P +    +  +   RRP     L  R+ +  + R    +  F E+++ + ++ +P    
Sbjct: 124 LPGEEVRLKYRYLDLRRPGMQSNLKLRSDMAKAARHALEDLDFTEVETPTFIKSTPEG-- 181

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F     +         L  SP+   + L+ +G E+ + FA  +R+ +     QPEF
Sbjct: 182 -ARDFVVPARLV--PGSWYALPQSPQLLKQLLMVSGVERYYQFARCYRDEDFRADRQPEF 238

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T L+   A+   E +M     +I    + A  +                 IT  EA  +Y
Sbjct: 239 TQLDMEMAYVDQEDVMAMAEKVIAAIWKAAGYE----------VQLPLPRITWQEAMDKY 288

Query: 178 ANIDLGTTLDNP 189
            +        NP
Sbjct: 289 GSDKPDLRFGNP 300



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 38/116 (32%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P         + +  DP       +++     E+      +     Q       
Sbjct: 453 WTSMHHPFTMPSKDWIDKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQDRVLNVL 512

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              K+    E        L       P  +GIA+G+DR V ++ GA +I +VI  P
Sbjct: 513 GISKE----EAEDKFGFLLEAFKYGAPPHAGIALGWDRTVSILAGAPSIRDVIAFP 564


>gi|162319786|ref|YP_422199.2| aspartyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 598

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 59/183 (32%), Gaps = 17/183 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R+ + + LR+  +   F E  +  L   SP     ++            
Sbjct: 134 RREDVHANMMLRSRVIAYLRQAMIGQGFTEFQTPILTASSPEGARDYLVPSRIHPGKFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ AG +K F  A  +R+        P EF  L++  ++ +  
Sbjct: 194 LPQ------APQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQLDFEMSYVT-- 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                  ++      V       F        +    IT A++  +Y   D     +   
Sbjct: 246 -----QDDVFAAIEPVLEGVFKEFGKGRAVTPAPFPRITYADSMLKY-GSDKPDLRNPII 299

Query: 191 QPD 193
             D
Sbjct: 300 IAD 302



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 45/140 (32%), Gaps = 11/140 (7%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
               + E  E    +         P                  ++++    +EL +    
Sbjct: 433 VDFPMYEINEETGLVEFSHNPFSMPQGGMDALLNQDPLTINAYQYDIVCNGVELSSGAIR 492

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLV 333
              P      FE         Y+  + ++E F   L       P   G A G DR+VML+
Sbjct: 493 NHRPDIMYKAFEI------AGYSAAH-VEEHFGGMLNAFKFGAPPHGGSAPGVDRIVMLL 545

Query: 334 TGANNINEVIWTPFSQSNQE 353
               NI E+I  P +Q  Q+
Sbjct: 546 ADQPNIREIILFPMNQQAQD 565


>gi|126306429|ref|XP_001373324.1| PREDICTED: similar to DARS2 protein [Monodelphis domestica]
          Length = 808

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 64/184 (34%), Gaps = 10/184 (5%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 303 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKKTPGGA---KEFVVPSREPGKF---YSLP 356

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      + K    +
Sbjct: 357 QSPQQFKQLLMVGGFDRYFQVARCYRDEGSKPERQPEFTQVDIEMSFVDQAGIQKLIEGL 416

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++ +      K           ++E       +       + +    D     +   L  
Sbjct: 417 LQYSWPK--DKNPLTIPFPSMTYTEALDFYGTDKPDTRFGMKIVDVSDIFRNTEIEFLRD 474

Query: 200 QAQQ 203
             ++
Sbjct: 475 MLKK 478



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 13/158 (8%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY- 252
           R       +  G+ V  D         +      P            +P      ++++ 
Sbjct: 572 RLECADLLEDRGV-VLRDPAAFHFLWVVEFPLFLPKEEDPRELESAHHPFTAPHPSDVHL 630

Query: 253 ---PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                +   +  ++L     E+      +    +Q++  E  ++       E   +    
Sbjct: 631 LYTEPEKVRSLHYDLVLNGSEVGGGSIRIHKAEQQQYVLETVLK-------EDVKLLSHL 683

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L  L    P   GIA+G DRLV L+TG+ +I +VI  P
Sbjct: 684 LQALDFGAPPHGGIALGLDRLVCLITGSPSIRDVIAFP 721


>gi|296536445|ref|ZP_06898542.1| aspartate--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296263224|gb|EFH09752.1| aspartate--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 600

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 53/163 (32%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     ++ G+    +  +  I    + E  E    ++        P       N    
Sbjct: 410 KVRTKLGEELGLIAQDEFRFCWIVDFPMYELNEETGQVDFSHNPFSMPQGGLEALNSMNP 469

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    IEL +       P      FE         Y     ++E F   L 
Sbjct: 470 LDIKAFQYDIVCNGIELSSGAIRNHRPDIMIRAFEI------AGYT-AQTVEERFGGMLN 522

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G A G DR+VML+    NI EVI  P +Q  Q+
Sbjct: 523 AFRYGAPPHGGSAPGIDRMVMLLADEPNIREVILFPLNQQGQD 565



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 9/139 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              ++   +L R  + +S+R   +E  F+E  +  L   SP      R F          
Sbjct: 134 RREKQHRNMLLRAGVIASIRRRMIEQGFVEYQTPILTASSPEG---ARDFLVPSRNH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   +  + AG ++ F  A  +R+        P EF  L++  +  + E
Sbjct: 188 PGTFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFEMSFVTQE 247

Query: 131 QLMKDCMNIIRCAAEVANQ 149
            +      ++         
Sbjct: 248 DVFAAIEPVMEGIFVEFGG 266


>gi|225352759|ref|ZP_03743782.1| hypothetical protein BIFPSEUDO_04389 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156366|gb|EEG69935.1| hypothetical protein BIFPSEUDO_04389 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 599

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 16/180 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    E  F E+++   ++ +P      R F     +    
Sbjct: 139 RRPSMQRNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEG---ARDFVVPARL--VP 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A    E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAFVDQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    + A  +               + IT  EA  +Y +        NP   
Sbjct: 254 MAMAEKVIAAIWKSAGYE----------IQLPIQRITWQEAMDKYGSDKPDLRFGNPLIE 303



 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 19/121 (15%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE-- 289
                +P         + +  DP       +++     E+      +     Q    +  
Sbjct: 453 WTSMHHPFTMPSKDWIDTFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVL 512

Query: 290 ----KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               +E  +K     E +             P  +GIA+G+DR   ++ GA++I +VI  
Sbjct: 513 GITPEEAADKFGFLLEAFK---------YGAPPHAGIALGWDRTAAILAGADSIRDVIAF 563

Query: 346 P 346
           P
Sbjct: 564 P 564


>gi|149636279|ref|XP_001515219.1| PREDICTED: similar to DARS2 protein [Ornithorhynchus anatinus]
          Length = 880

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 74/241 (30%), Gaps = 23/241 (9%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +RE+    + F+++++ +L + +PG     + F               L 
Sbjct: 423 LRLRSQMVMKMREFLCNLHGFVDVETPTLFKKTPGG---AKEFVVPSREPGKF---YSLP 476

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      + K     
Sbjct: 477 QSPQQFKQLLMVGGLDRYFQVARCFRDEGSKPDRQPEFTQIDIEMSFVDQAGIQKLIE-- 534

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD----RH 195
                       FS+     +  +    ++ +EA   Y  +D   T       D      
Sbjct: 535 --------GLLQFSWPKEKGHITTPFPSMSYSEALTSY-GLDKPDTRFGMKILDVSDILK 585

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
              ++  Q  +        +             ++          +    S L      +
Sbjct: 586 TTEIEFVQKALSEPQGAIKAICVPEGTKHLKRKDIESLKEFAETHFNQEISPLYLRSNRN 645

Query: 256 P 256
            
Sbjct: 646 W 646



 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 8/90 (8%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
            ++ ++L     E+      +    +Q +  E  ++       E   +    L  L+   
Sbjct: 759 RSQHYDLVLNGSEVGGGSIRIHSAEQQHYILETVLK-------EDVKLLSHLLEALSFGA 811

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   GIA+G DRL+ L+TGA +I +VI  P
Sbjct: 812 PPHGGIALGLDRLICLITGAPSIRDVIAFP 841


>gi|54288373|gb|AAV31661.1| predicted aspartyl-tRNA synthetase [uncultured alpha
           proteobacterium EBAC2C11]
          Length = 602

 Score = 92.4 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 62/205 (30%), Gaps = 9/205 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    ++ R  I  S+R   V   F E  +  L   SP      R F     +    
Sbjct: 145 RRNRPHANIMLRAEIIQSIRARMVAQDFTEFQTPILTASSPEG---ARDFLVPARLH--- 198

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ +G ++ F  A  +R+ +      P EF  L+   +    +
Sbjct: 199 PGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDSRADRSPGEFYQLDLEMSFVEQQ 258

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      +I+   E  ++K+     ++ +           +   R        T     
Sbjct: 259 DVFDAVEPVIKGVFEEFSEKVVDANFLHISYADSMLKYGNDKPDLRIPFEICDVTDIFRG 318

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWS 215
                      + A +R        
Sbjct: 319 SDFSIFAKNIEKGAVVRAVPGPKCG 343



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 54/188 (28%), Gaps = 18/188 (9%)

Query: 171 AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
           AEA    A +  G  +     P      L  +         D       R       P  
Sbjct: 386 AEAIRVAAGVGDGDAVFFACAPADDAASLAGRARVKIGQDHDLIDKNLFRFAWIVDFPMF 445

Query: 231 GINCCTILDRY---PAPESALANI----YPADPRFTKRFELYACNIELCNACDELLDPIE 283
             +  T    +   P                      +++L    +EL +       P  
Sbjct: 446 EADPSTGKIDFSHNPFSMPQGGMKALEEQNPLNIKAWQYDLVCNGVELSSGAIRNHLPEV 505

Query: 284 QRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
               FE         Y ++  ++E F   +       P   GIA G DR+VML+    NI
Sbjct: 506 MYKAFEI------AGYPKSI-VNEKFPAMINAFRFGAPPHGGIAPGIDRIVMLIADEPNI 558

Query: 340 NEVIWTPF 347
            EVI  P 
Sbjct: 559 REVILFPM 566


>gi|283455705|ref|YP_003360269.1| aspartyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|283102339|gb|ADB09445.1| aspS Aspartyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 586

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 16/177 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    E  F E+++   ++ +P      R F     +    
Sbjct: 126 RRPSMQHNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEG---ARDFVVPARL--VP 180

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A    E +
Sbjct: 181 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAFVDQEDV 240

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           M     +I    + A  +               + IT  EA  +Y +        NP
Sbjct: 241 MAMAEKVIAAIWKSAGYE----------IQLPIQRITWQEAMDKYGSDKPDLRFGNP 287



 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 19/121 (15%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE-- 289
                +P         + +  DP       +++     E+      +     Q    +  
Sbjct: 440 WTSMHHPFTMPSKDWIDTFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVL 499

Query: 290 ----KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               +E  +K     E +             P  +GIA+G+DR   ++ GA++I +VI  
Sbjct: 500 GITPEEAADKFGFLLEAFK---------YGAPPHAGIALGWDRTAAILAGADSIRDVIAF 550

Query: 346 P 346
           P
Sbjct: 551 P 551


>gi|319760578|ref|YP_004124516.1| aspartyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039292|gb|ADV33842.1| aspartyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 576

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 62/182 (34%), Gaps = 23/182 (12%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RRP +      R+ + S    +     F  ID+  L   +P     ++      +     
Sbjct: 132 RRPIMLLNIKTRSRVMSLTHRFMELEGFFNIDTPILTKSTPEGARDYLVPSRLHI----- 186

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             K   L  SP+   + L+ AG ++ +     +R+ +     QPEFT ++   +    ++
Sbjct: 187 -DKKYALPQSPQIFKQLLMIAGFDRYYQITKCFRDEDLRSDRQPEFTQIDMEASFIDAKR 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +     I             ++ +          I+  ++  R+   D     +  + 
Sbjct: 246 IRELMEFFI----------CTVWREILNIELGVFPQISYFDSMRRF-GSDTPDLRNPIEI 294

Query: 192 PD 193
            D
Sbjct: 295 VD 296



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 15/121 (12%)

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
           +     +   P                ++ +++     E+ +    +   + Q+  F+  
Sbjct: 451 LIPVHHMFTAPKNCDIEFLKNNPLLAVSEAYDMVINGYEIGSGSVRIHSYLLQQTIFDIL 510

Query: 292 -----MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                 Q+KK             +  L    P  +G+A G DRL+ML+TG+ +I +VI  
Sbjct: 511 GISRSTQQKKFG---------CLMNALKYGAPPHAGLAFGLDRLLMLLTGSKSIRDVIAF 561

Query: 346 P 346
           P
Sbjct: 562 P 562


>gi|229496467|ref|ZP_04390182.1| aspartyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316607|gb|EEN82525.1| aspartyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 553

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 5/147 (3%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A  AG++  +      +    L+E  E              P PE               
Sbjct: 410 ADLAGLKDPNKFECLWVVDFPLLEWDEETQRFYAMHHPFTSPKPEDISLLSTDPGAVRAN 469

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            +++    +E+      + D   Q   FE     K+K   E +      +       P  
Sbjct: 470 AYDMVINGVEVGGGSIRIHDSQLQHKMFEVLGFTKEKA-EEQFG---FLMNAFKYGAPPH 525

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            G+A G DR V ++ G ++I + I  P
Sbjct: 526 GGVAFGLDRWVSIMAGLDSIRDCIAFP 552



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 65/201 (32%), Gaps = 24/201 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR P    +  R+ +    R Y     F+EI++  L   +P      R F     +   
Sbjct: 130 LRRDPVKRNIELRHRMALLTRNYLDRLGFLEIETPMLIKSTPEG---ARDFVVPSRMN-- 184

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                Y L  SP+   + L+ AG ++ F     +R+ +     QPEFT ++   +    E
Sbjct: 185 -PNEFYALPQSPQTFKQLLMVAGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVDQE 243

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +                      +     P +    ++  EA   Y +         P 
Sbjct: 244 DI---------LTVFEGLAVELFSKIREVTPATPFRRMSWYEAMNSYGSDKPDLRFGMP- 293

Query: 191 QPDRHLLYLQAQQAGIRVAHD 211
                 +   AQ  G+ +  +
Sbjct: 294 ---IREITTLAQGHGMSLMDE 311


>gi|171743322|ref|ZP_02919129.1| hypothetical protein BIFDEN_02453 [Bifidobacterium dentium ATCC
           27678]
 gi|306823267|ref|ZP_07456643.1| aspartate--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309801923|ref|ZP_07696038.1| aspartate--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|171278936|gb|EDT46597.1| hypothetical protein BIFDEN_02453 [Bifidobacterium dentium ATCC
           27678]
 gi|304553899|gb|EFM41810.1| aspartate--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308221479|gb|EFO77776.1| aspartate--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 599

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 16/177 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    E  F E+++   ++ +P      R F     +    
Sbjct: 139 RRPSMQHNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEG---ARDFVVPARL--VP 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A    E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAFVDQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           M     +I    + A  +               + IT  EA  +Y +        NP
Sbjct: 254 MAMAEKVIAAIWKSAGYE----------IQLPIQRITWQEAMDKYGSDKPDLRFGNP 300



 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 19/121 (15%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE-- 289
                +P         + +  DP       +++     E+      +     Q    +  
Sbjct: 453 WTSMHHPFTMPSKDWIDTFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVL 512

Query: 290 ----KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               +E  +K     E +             P  +GIA+G+DR   ++ GA++I +VI  
Sbjct: 513 GITPEEAADKFGFLLEAFK---------YGAPPHAGIALGWDRTAAILAGADSIRDVIAF 563

Query: 346 P 346
           P
Sbjct: 564 P 564


>gi|297193199|ref|ZP_06910597.1| aspartyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197720469|gb|EDY64377.1| aspartyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 590

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG    +   +  I    + E+ E    I+        P            
Sbjct: 405 AVRVEAAKRAGHFEENVFRFCWIVDFPMYERDEETGKIDFSHNPFSMPQGGLEALETKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    +EL +      +P      FE     ++ + +E   +    L    
Sbjct: 465 LDILGWQYDIVCNGVELSSGAIRNHEPEIMFKAFEIAGYSRETVEHEFAGM----LRAFE 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 521 YGAPPHGGIAPGIDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 65/200 (32%), Gaps = 19/200 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R  + S++R       F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILAATSPEG---ARDFVVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
                    +    E    ++F       +  S    I   EA  +Y +   DL   L+ 
Sbjct: 245 -----EQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAKLEL 299

Query: 189 PDQPDRHLLYLQAQQAGIRV 208
            D  D          AG  V
Sbjct: 300 VDISDVFAGSEFKAFAGKHV 319


>gi|312074259|ref|XP_003139890.1| DRS-2 protein [Loa loa]
 gi|307764949|gb|EFO24183.1| DRS-2 protein [Loa loa]
          Length = 407

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 64/158 (40%), Gaps = 6/158 (3%)

Query: 17  RRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRK 74
           R +  L  R  +   +R+Y VE   FIE+++ +L + +PG       F       + + K
Sbjct: 157 RMQRALRLRANVVHGMRKYLVEKANFIEVETPTLFRRTPGGS---HEFIVPAPKPN-LGK 212

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
              L  SP+   + L+  G ++ F  A  +R+       QPEFT ++   +    + +MK
Sbjct: 213 FYSLPQSPQQFKQLLMCGGIDRYFQIARCYRDEGAKSDRQPEFTQVDVELSFTDQDNVMK 272

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
              +II  +       +          + + E +   +
Sbjct: 273 LIESIIVESWPKELDDLKPSAPFKRIKYLKAERLFGTD 310


>gi|303232743|ref|ZP_07319428.1| aspartate--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481229|gb|EFL44304.1| aspartate--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 588

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 68/194 (35%), Gaps = 10/194 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              R    L KR+    ++R+ F  + F+E+++ +L + +P      +     +      
Sbjct: 138 RRPRTVQTLQKRSDFTFAIRQAFHNHAFMEVETPALFKSTPEGARDFLVPSRIKKGAFYA 197

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +  + + 
Sbjct: 198 LPQ------SPQLLKQLLMIGGVERYYQVAKCFRDEDFRADRQPEFTQVDMEMSFVTEDD 251

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     I+  A       +          + +      ++       +++         
Sbjct: 252 ILHTLEQILHEAFAQVGVDMPIPLPR--MQYWDAMDTYGSDKPDTRFGMEIHNLTSGFTS 309

Query: 192 PDRHLLYLQAQQAG 205
            +  L     ++  
Sbjct: 310 SEFSLFANAEKENK 323



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 42/151 (27%), Gaps = 14/151 (9%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A   GI  +       +   +     E              P  ES            + 
Sbjct: 417 ADALGITRSGHAFLWVVNFPLFHWDDERGAYAAEHQPFTL-PRCESVEEIKANPLGIGSY 475

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKE----MQEKKKIYNETYPIDEDFLACL-TE 315
            ++      E       + DP  Q    E       + + +            L  L   
Sbjct: 476 TYDFVMDGYEAGGGGMRIHDPKMQLDILELLGFTPERARAQFG--------FLLDALQYG 527

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            P   G A+G DR+ ML+ G  +I EVI  P
Sbjct: 528 APPMGGFALGLDRVCMLICGTESIREVIAFP 558


>gi|289428615|ref|ZP_06430299.1| putative aspartate--tRNA ligase [Propionibacterium acnes J165]
 gi|289158309|gb|EFD06528.1| putative aspartate--tRNA ligase [Propionibacterium acnes J165]
          Length = 387

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P     + +  DP       ++      E+      +     Q   F          
Sbjct: 235 FTSPTPDCLDTFDTDPGSALAYAYDFVVNGNEVGGGSIRIHRRDVQERVFNVMGI----G 290

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G DRLVML+ G   I +VI  P
Sbjct: 291 PEEAQEKFGFLLDAFKFGAPPHGGIAFGLDRLVMLLGGFETIRDVIAFP 339


>gi|212716936|ref|ZP_03325064.1| hypothetical protein BIFCAT_01880 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660221|gb|EEB20796.1| hypothetical protein BIFCAT_01880 [Bifidobacterium catenulatum DSM
           16992]
          Length = 599

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 16/180 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    E  F E+++   ++ +P      R F     +    
Sbjct: 139 RRPSMQRNLKLRSQMSKAARHALEEMGFEEVETPTMIKSTPEGA---RDFVVPARL--VP 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A    E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAFVDQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    + A  +               + IT  EA  +Y +        NP   
Sbjct: 254 MAMAEKVIAAIWKSAGYE----------IQLPIQRITWQEAMDKYGSDKPDLRFGNPLIE 303



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 19/121 (15%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE-- 289
                +P         + +  DP       +++     E+      +     Q    +  
Sbjct: 453 WTSMHHPFTMPSKDWIDTFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVL 512

Query: 290 ----KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               +E  +K     E +             P  +GIA+G+DR   ++ GA++I +VI  
Sbjct: 513 GITPEEAADKFGFLLEAFK---------YGAPPHAGIALGWDRTAAILAGADSIRDVIAF 563

Query: 346 P 346
           P
Sbjct: 564 P 564


>gi|262046467|ref|ZP_06019429.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260573338|gb|EEX29896.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 343

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 73/254 (28%), Gaps = 34/254 (13%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAF 62
           +  +  W R    +    +  RN +  +  ++F +  FI+ D+   +  +P         
Sbjct: 116 LDHRHLWLRSK--KPFAIMQIRNTMFKATVDFFEKEGFIKFDAPIFMHSAPEG------- 166

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +T+L   ++     YL  S +    +  A    KIF F   +R  E  G  H  EF M+E
Sbjct: 167 TTQLFHVEYFDHDAYLSQSGQLY-GEAGAMAYGKIFTFGPTFRAEESKGRRHMTEFWMME 225

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A    ++ +      +    +                      +   E   +    D
Sbjct: 226 PEMAWMHQDESLDIQERYLAYMVKQV--------------------LENNEYELKILGRD 265

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                   +     L Y  A +       D  W D F       I      +    +  Y
Sbjct: 266 PEKLRPTTEGNFVRLPYDDAIKMLQDAGRDIKWGDDFGAPDEGYISEQY--DRPVFIVNY 323

Query: 242 PAPESALANIYPAD 255
           P            D
Sbjct: 324 PTSIKPFYMKKNPD 337


>gi|254994367|ref|ZP_05276557.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 341

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 58/180 (32%), Gaps = 17/180 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +     +++    + A          N         +T  EA  R+ +           Q
Sbjct: 249 IQAITEDMLVDVVKEA---------KNITIDKPFPRMTYKEAMDRFGSDKPDIRFGLELQ 299


>gi|270006699|gb|EFA03147.1| hypothetical protein TcasGA2_TC013060 [Tribolium castaneum]
          Length = 549

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 68/186 (36%), Gaps = 18/186 (9%)

Query: 22  LLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +RE+ V +  F+++++ +L + +PG       F           +   L 
Sbjct: 110 LRVRSEMLMKMREFLVNHSGFVDVETPTLFKATPGGAQE---FIVPTRFP---GQFYSLV 163

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+A   ++ F  A  +R+       QPEFT L+   +    + +++    +
Sbjct: 164 QSPQQFKQMLMAGAVDRYFQIARCYRDEGARPDRQPEFTQLDIEMSFTDLDNILQLVEEL 223

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +  A       +            + + +   EA   Y +    T      +    LL L
Sbjct: 224 LGHAWPPFLGPLPK----------KFQRMGFGEAMELYGSDQPDTRFGFKLENCTELLKL 273

Query: 200 QAQQAG 205
             +   
Sbjct: 274 NEKFIN 279



 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 56/180 (31%), Gaps = 10/180 (5%)

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV-AHDDTWSDIFSRILIEKIE 227
            V++    +          +     R       +Q G+ V A       +    L E  E
Sbjct: 347 HVSDDCVLFLGFGNKKQTQSLMGKVRLEYANHLEQLGVSVRAKGMHLLWVVDMPLFEPGE 406

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +         P P+  L          +  F+L     E+      + DP  Q   
Sbjct: 407 SPGSLQSAHHPFTAPNPDDLLLLDTAPLQVRSLSFDLVLNGNEIGGGSVRIHDPDLQEKI 466

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F     +K  +        +  +  L+   P   GIA+G DRL+  +    +I +VI  P
Sbjct: 467 FRMLNIDKNSM--------QHIIDMLSSGCPPHGGIALGLDRLMSKILNTASIRDVIAFP 518


>gi|224058910|ref|XP_002190760.1| PREDICTED: aspartyl-tRNA synthetase 2, mitochondrial [Taeniopygia
           guttata]
          Length = 624

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+  S L          ++ ++L     E+      +    +QR   EK ++       
Sbjct: 487 HPSDVSLLY--SDPTKVRSQHYDLVLNGNEVGGGSIRIHSAEQQRFVLEKVLK------- 537

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    +  L    P   GIA+G DRL+ L+  A +I +VI  P
Sbjct: 538 EDSEVLSHLIEALEFGAPPHGGIALGLDRLISLIVDAPSIRDVIAFP 584



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 21/189 (11%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFST 64
           +    R      +  L  R+ +   +REY    + F+++++ +L + +PG     + F  
Sbjct: 153 RYLDLRSSRL--QNALRLRSRVVMRMREYLCNLHGFVDVETPTLFKRTPGG---AKEFLV 207

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                        L  SP+   + L+  G ++ F  A  +R+       QPEFT ++   
Sbjct: 208 PSREAGKF---YSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEM 264

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +      + +    +++ +       I +              +T  EA A Y   D   
Sbjct: 265 SFVDQAGIQRLIEGLLQHSWPEERGSIMT----------PFPSMTYEEALAGY-GTDKPD 313

Query: 185 TLDNPDQPD 193
           T       D
Sbjct: 314 TRFGMKIMD 322


>gi|295396092|ref|ZP_06806275.1| aspartate--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971033|gb|EFG46925.1| aspartate--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 590

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 21/187 (11%)

Query: 18  RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RRP     L  R+ +  + R+   +++FIEI++ +L   +P      R F     +    
Sbjct: 130 RRPASGNVLRLRSDVNKTARQVLDKHKFIEIETPTLTRSTPEG---ARDFVVPARL--KP 184

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L  AG E+ +  A  +R+ +     QPEFT L+   +    + +
Sbjct: 185 GSWYALPQSPQLFKQLLQVAGMERYYQIARCYRDEDFRADRQPEFTQLDIEASFVEQDDI 244

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     I+             ++ ++    +  E +T  +A  +Y   D           
Sbjct: 245 IALAEEILVEL----------WKLIDVEIPTPIERMTYKDAMEKY-GTDKPDLRFGLPLT 293

Query: 193 DRHLLYL 199
           D    + 
Sbjct: 294 DLTEYFA 300



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 19/115 (16%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE------KEM 292
           + AP+   A+ +  DP       +++     E+      +  P  Q   F+      ++ 
Sbjct: 452 FTAPKPEFADTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRPDVQERVFKVMGISQEDA 511

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           QEK              L       P   GIA G+DRLV L+ G  +I + I  P
Sbjct: 512 QEKFG----------FLLDAFKFGAPPHGGIAFGWDRLVSLLAGTESIRDTIAFP 556


>gi|332837318|ref|XP_003313275.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial
           isoform 1 [Pan troglodytes]
          Length = 250

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 72/262 (27%), Gaps = 23/262 (8%)

Query: 90  LAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           ++    ++F F   +R        H  EF M+E   +     Q +   +  +  A  +  
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFKATTMMV 60

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                     C+ F  P      E   +          +N             +QA    
Sbjct: 61  LSKCPEDVELCHKFIAPGQKDRLEHMLK----------NNFLIISYTEAVEILKQASQNF 110

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
                W         + +  + G      +  YP            D        +    
Sbjct: 111 TFTPEWGADLRTEHEKYLVKHCGNIPV-FVINYPLTLKPFYMRDNEDGPQHTVAAV---- 165

Query: 269 IELCNACDELLDPIEQRHR--FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMG 325
             L     EL     +  R  F +E   +  +      + + +L           G  MG
Sbjct: 166 DLLVPGVGELFGGGLREERYHFLEERLARSGLTE----VYQWYLDLRRFGSVPHGGFGMG 221

Query: 326 FDRLVMLVTGANNINEVIWTPF 347
           F+R +  V G +NI +VI  P 
Sbjct: 222 FERYLQCVLGVDNIKDVIPFPR 243


>gi|229820498|ref|YP_002882024.1| aspartyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|259511852|sp|C5C5S1|SYD_BEUC1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|229566411|gb|ACQ80262.1| aspartyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 601

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
             + +P     + +  DP       +++     E+      +     Q   F+    +  
Sbjct: 457 HAFTSPTPEWIDTFEQDPGSALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFQVMGIDAA 516

Query: 297 KIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L       P   GIA G+DR++ L+TG+ +I EVI  P
Sbjct: 517 ----EAQEKFGFLLDAFSYGAPPHGGIAFGWDRILALLTGSESIREVIAFP 563



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 26/188 (13%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   + R            +  R     + R      +F+EI++ +L   +P      R 
Sbjct: 121 EVRLKYRYLDLRRPAPARAIRLRAKANQAARRVLDAEEFVEIETPTLTRSTPEG---ARD 177

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+
Sbjct: 178 FLVPARL--APGSWYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLD 235

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + ++     ++    E+    I +              +T  +A   Y    
Sbjct: 236 VEMSFVEQDDVIALAEKVLVALWELIGFTIPT----------PIPRMTFDDAMRLYGTDK 285

Query: 182 LGTTLDNP 189
                 NP
Sbjct: 286 PDLRFGNP 293


>gi|189501606|ref|YP_001957323.1| aspartyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|238692323|sp|B3EUH5|SYD_AMOA5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189497047|gb|ACE05594.1| aspartyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
          Length = 582

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 70/189 (37%), Gaps = 22/189 (11%)

Query: 16  YRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR   +  LL R ++    R Y  ++ F+++++  L   +PG     R F     I   
Sbjct: 132 LRRPPLQKNLLLRQLVAQHARAYLEQHHFVDVETPLLIKSTPGG---ARDFVVPSRIH-- 186

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
             +  Y L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT ++   +  +  
Sbjct: 187 -PQQFYALPQSPQIFKQLLMVAGLDRYYQIAKCFRDEDFRADRQPEFTQIDCELSFVTQA 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++    N  +   E   Q              +   IT AEA  +Y   D         
Sbjct: 246 DILHIFENFTKYIFEATIQ----------VRLDKFPCITYAEAMQKY-GTDKPDIRFGMR 294

Query: 191 QPDRHLLYL 199
             +   L  
Sbjct: 295 LIELTELVK 303



 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 48/158 (30%), Gaps = 15/158 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            +  +          +    L+E  E +            P  E         +      
Sbjct: 411 DELHLVSKDKFAPLWVVDFPLLEWNEESQRYVSRHHPFTSPKQEDIELLSTKPETVRANA 470

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL-ACLT-E 315
           ++L    +E+      + D   Q   F      E + +++           FL       
Sbjct: 471 YDLVINGMEIGGGSIRIHDRALQEQIFNVLGFSEEEARQQFG---------FLTDAFEYG 521

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   GIA GFDRL  ++   ++I   I  P + + ++
Sbjct: 522 APPHGGIAFGFDRLCAIIGREDSIRPFIAFPKNNAGRD 559


>gi|254994348|ref|ZP_05276538.1| aspartyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 197

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 45/155 (29%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++  +    +  +  +    L E  E              P  E        +
Sbjct: 15  ALRNKLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 74

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 75  SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 128

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 129 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 163


>gi|269126362|ref|YP_003299732.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268311320|gb|ACY97694.1| aspartyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 585

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 40/119 (33%), Gaps = 5/119 (4%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
             G          P PE A       +      ++L    +E+      +     Q+  F
Sbjct: 435 QTGWTSVHHPFTAPKPEYAATFHEQPETALADAYDLVCNGMEIGGGSIRIHRAEMQQRVF 494

Query: 289 EKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +     K+    E        L       P   GIA G+DR VML+ G  +I +VI  P
Sbjct: 495 DVLGLNKE----EAEAKFGFLLEAFKYGPPPHGGIAFGWDRTVMLLAGGESIRDVIAFP 549



 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 69/207 (33%), Gaps = 20/207 (9%)

Query: 3   QIPSQPWWN----RDFHYRRRPFLLKRNMIQSSLR----------EYFVENQFIEIDSMS 48
            +P     +     +   + R   ++R  +  +LR          E   E+ F+ +++ +
Sbjct: 103 PLPFPIEGDVNVNEEVRLKYRYLDIRRERVARALRIRSQAAYLVNEVMREHGFVNVETPT 162

Query: 49  LQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           L   +P      R F   + +Q        L  SP+   + L+ +G E+ +  A  +R+ 
Sbjct: 163 LTRSTPEGA---RDFLVPVRLQ--PGHWYALPQSPQLFKQLLMVSGLERYYQIARCYRDE 217

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT ++   +    E +M     ++    +                      
Sbjct: 218 DFRADRQPEFTQIDIEMSFVEAEDVMAIGEELVARLWKEIVGYEVPRPIPRLAYADAMAR 277

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDR 194
               +   R+ N  +  T      P R
Sbjct: 278 YGSDKPDLRFGNELVDMTAYFSATPFR 304


>gi|225560710|gb|EEH08991.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 591

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 61/420 (14%), Positives = 114/420 (27%), Gaps = 88/420 (20%)

Query: 1   MHQIPSQPWWNRDFHYRRRPFL-----LKRNMIQSSLREYFV-ENQ--FIEIDSMSLQYS 52
           + QIP         H R R          R+     L + F  +    F+++    +  S
Sbjct: 180 LRQIP---------HLRLRTPFNSLLSRFRSESIFQLGQVFRFQLGGCFVQVQPPLITSS 230

Query: 53  -PGNETHIRAFSTELIIQDH-----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
                  +        +         R P YL  S +   +   AA    ++  +  +R 
Sbjct: 231 DCEGAGEVFTVVPGDKVDGAEVGEFFRSPKYLTVSSQLHLEAY-AAELGNVWALSPTFRA 289

Query: 107 GEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
            +     H  EF MLE         Q +    +I+        ++++          ++ 
Sbjct: 290 EKSDTPRHLSEFYMLEVEMNFV---QSVDSLTDIVESLIRDLTKRLYETPVAEEIFTAKR 346

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQP------DRHLLYLQAQQAGIRVAHDDTWSDIFS 219
              + AE   +   +     ++    P         LL    Q           W +   
Sbjct: 347 TGESGAEKVDKGLRLRWLGIMEGEKWPRITYTSAIELLQKAVQSKATIFNFPPVWEEGLQ 406

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALAN----------------IYPADPRFTKRFE 263
               + I   +G      +  YP                        +   DP  T+  E
Sbjct: 407 LEHEKFIVDEIGKGRPVFVTHYPKKVKPFYMAPSVVADESSSSSPVEVLHHDPLQTR--E 464

Query: 264 LYACNIELCNACDELLDPIEQRHRF--EKEM--------QEKKKIYN------------- 300
             AC   L     E++    +  R     +         ++ +   +             
Sbjct: 465 TVACFDLLMPEISEVVGGSIREQRLPNLIQNMREHGLLKKKLEAGSDADNASSSTHSISE 524

Query: 301 ---ETYPI---DEDF-----LACLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                YP    DE        A L         G  +GFDR +  + G +++ +V+  P 
Sbjct: 525 SSSPVYPYLQPDEHLGSIQWYADLRRWGSAPHGGFGLGFDRYLGYLAGVSSLRDVVPFPR 584


>gi|189067875|dbj|BAG37813.1| unnamed protein product [Homo sapiens]
          Length = 250

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 72/262 (27%), Gaps = 23/262 (8%)

Query: 90  LAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           ++    ++F F   +R        H  EF M+E   +     Q +   +  +  A  +  
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFRATTMMV 60

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                     C+ F  P      E   +          +N             +QA    
Sbjct: 61  LSKCPEDVELCHKFIAPGQKDRLEHMLK----------NNFLIISYTEAVEILKQASQNF 110

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
                W         + +  + G      +  YP            D        +    
Sbjct: 111 TFTPEWGADLRTEHEKYLVKHCGNIPV-FVINYPLTLKPFYMRDNEDGPQHTVAAV---- 165

Query: 269 IELCNACDELLDPIEQRHR--FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMG 325
             L     EL     +  R  F +E   +  +      + + +L           G  MG
Sbjct: 166 DLLVPGVGELFGGGLREERYHFLEERLARSGLTE----VYQWYLDLRRFGSVPHGGFGMG 221

Query: 326 FDRLVMLVTGANNINEVIWTPF 347
           F+R +  + G +NI +VI  P 
Sbjct: 222 FERYLQCILGVDNIKDVIPFPR 243


>gi|254976334|ref|ZP_05272806.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255093719|ref|ZP_05323197.1| putative aspartyl-tRNA synthetase [Clostridium difficile CIP
           107932]
 gi|255315471|ref|ZP_05357054.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518134|ref|ZP_05385810.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651250|ref|ZP_05398152.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260684314|ref|YP_003215599.1| putative aspartyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260687973|ref|YP_003219107.1| putative aspartyl-tRNA synthetase [Clostridium difficile R20291]
 gi|306521094|ref|ZP_07407441.1| aspartyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|260210477|emb|CBA64949.1| putative aspartyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260213990|emb|CBE06101.1| putative aspartyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 595

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 18/174 (10%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ + +  R Y   N+F EI++  L   +P     ++            + +     
Sbjct: 146 LKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEGARDYLVPSRVNPGKFYALPQ----- 200

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E +M     +
Sbjct: 201 -SPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDVMSMIEGL 259

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           +    +            +         +T AEA ++Y   D   T    +  D
Sbjct: 260 LEAIFKEVL---------DVELALPLPKMTYAEAMSKY-GSDKPDTRFGYELTD 303



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 44/137 (32%), Gaps = 14/137 (10%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-----FTKRFELYACNIELC 272
              +    +              +P       ++   +         K +++     E+ 
Sbjct: 431 LLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKSSLRAKAYDIVLNGYEIG 490

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQSSGIAMGFDRL 329
                + +   Q   F      K   + E    ++    L       P  +G+A G DRL
Sbjct: 491 GGSVRISNSDIQSRMF------KALGFTEERANEKFGYLLEAFKYGTPPHAGLAFGLDRL 544

Query: 330 VMLVTGANNINEVIWTP 346
           VML+ G +NI EVI  P
Sbjct: 545 VMLLAGTDNIREVIAFP 561


>gi|302520596|ref|ZP_07272938.1| aspartyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|318059207|ref|ZP_07977930.1| aspartyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318079388|ref|ZP_07986720.1| aspartyl-tRNA synthetase [Streptomyces sp. SA3_actF]
 gi|302429491|gb|EFL01307.1| aspartyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 587

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG        +  +    + EK E     +        P            
Sbjct: 405 AVRVEAAKRAGHFEEGVFRFCWVVDFPMFEKDEETGKTDFSHNPFSMPQGGMDALEHKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    IEL +      +P      FE    +++ + +E   +    L    
Sbjct: 465 LDILAWQYDIVCNGIELSSGAIRNHEPAIMLKAFEIAGYDRETVEHEFAGM----LRAFR 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 521 LGAPPHGGIAPGIDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 23/224 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R  + +++R+  V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRTAVIAAVRQKMVALGFNEMATPILTATSPEG---ARDFVVPSRLN--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            +   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GRFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
                   +    E    ++F+         S    I   E+  +Y N   DL   L+  
Sbjct: 245 ----EQEDVFQPVEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRAQLELH 300

Query: 190 DQPDRHLLYLQAQQAGIRVAH------DDTWSDIFSRILIEKIE 227
           D  D          AG  V               F ++    +E
Sbjct: 301 DISDVFASSDFKAFAGKHVRALPVPDTAKQSRKFFDQLGEYAVE 344


>gi|307187769|gb|EFN72741.1| Aspartyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
          Length = 649

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 45/158 (28%), Gaps = 19/158 (12%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           R       ++ G ++   +      +   +   E  L          +            
Sbjct: 475 RVEFTNILEEKGEQIRSSEAEIVWITDFPLFTFEKQLESTHHPFTQPHSDDMEYFIT--D 532

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE----DF 309
                   ++L     E+      + D   QR   +               IDE      
Sbjct: 533 PLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILKMLN------------IDESELSHM 580

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L  L    P   GIA+G DRLV L+  A +I  VI  P
Sbjct: 581 LEALMYGAPPHGGIAIGLDRLVCLLCNAKSIRNVIAFP 618



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 87/246 (35%), Gaps = 18/246 (7%)

Query: 22  LLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ + + +RE+ ++   F++I++ +L + +PG       F        +      L 
Sbjct: 208 LRMRSSLITKMREFLIKECNFVDIETPTLFKSTPGGAQE---FIVPTRQPGNF---YSLV 261

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT L+   +    + +M    ++
Sbjct: 262 QSPQQFKQLLMVGGFDRYFQVARCYRDESARHDRQPEFTQLDIEMSFVDRDGIMNLIEHL 321

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +          ++S+           + +T  +A   Y        +    Q   H+  L
Sbjct: 322 L----------MYSWPEELSPIKIPFKLMTYKDAMELYGTDQPDLRIPYRIQDLTHISDL 371

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
              +  +++        +     ++ +  ++      I D Y      +      +    
Sbjct: 372 SVLKRTMKLNDQQKVYALTFPNKLKYLTNSVRNKFSKIRDDYFNTTKLIQLKIENNLWRA 431

Query: 260 KRFELY 265
              EL+
Sbjct: 432 HLDELF 437


>gi|268325213|emb|CBH38801.1| aspartyl-tRNA synthetase, C-terminal part [uncultured archaeon]
          Length = 157

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 50/160 (31%), Gaps = 15/160 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            + Y +A +          W +         +     I     +  +P            
Sbjct: 3   WITYDEAIELLSGEGEQIEWGEDIGTSAERTLGK--VIGELYFITDWPCAIKPFYAQPAD 60

Query: 255 DPR----FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
                      F+L    +EL +    +          +++++ K    +      E +L
Sbjct: 61  VEGGKGDICNAFDLMHPRLELSSGSQRVHSY----ELLKRQIETKGLGADS----FEFYL 112

Query: 311 ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                 MP  +G  +G +RL+M +   +NI EV+  P  +
Sbjct: 113 DAFRYGMPPHAGWGLGVERLLMSMLEIDNIREVVLFPRDR 152


>gi|220912776|ref|YP_002488085.1| aspartyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|254781712|sp|B8H9C7|SYD_ARTCA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219859654|gb|ACL39996.1| aspartyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 599

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 72/195 (36%), Gaps = 22/195 (11%)

Query: 11  NRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +   RRP     +  R+      R+      ++EI++ +L   +P      R F  
Sbjct: 120 LKHRYLDLRRPGPSRNIRLRSEANRVARDLLHHEGYVEIETPTLTRSTPEG---ARDFLV 176

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +         L  SP+   + L   G EK +  A  +R+ +     QPEFT L+   
Sbjct: 177 PARL--APGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQPEFTQLDIEA 234

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    + +++   NI++            ++ ++    +  + IT A+A ARY   D   
Sbjct: 235 SFVDQDDVIRLGENIVKA----------VWKLIDVEIPTPIQRITYADAMARY-GSDKPD 283

Query: 185 TLDNPDQPDRHLLYL 199
                +  +    + 
Sbjct: 284 LRFGQELTELTEFFK 298



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 5/106 (4%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P PE         +   +  +++     E+      +     Q   FE    +K+    +
Sbjct: 453 PKPEFLDTFDKDPESALSYAYDIVCNGNEIGGGSIRIHQRDVQERVFELMGLDKE----D 508

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   L       P   GIA G+DR+V L+ G  +I +VI  P
Sbjct: 509 AQTKFGFLLEGFKYGAPPHGGIAFGWDRVVSLLAGVESIRDVIAFP 554


>gi|126700354|ref|YP_001089251.1| putative aspartyl-tRNA synthetase [Clostridium difficile 630]
 gi|255101910|ref|ZP_05330887.1| putative aspartyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255307779|ref|ZP_05351950.1| putative aspartyl-tRNA synthetase [Clostridium difficile ATCC
           43255]
 gi|115251791|emb|CAJ69626.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
           [Clostridium difficile]
          Length = 595

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 18/174 (10%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ + +  R Y   N+F EI++  L   +P     ++            + +     
Sbjct: 146 LKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEGARDYLVPSRVNPGKFYALPQ----- 200

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+ +G ++ F     +R+ +     QPEFT ++   +    E +M     +
Sbjct: 201 -SPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQPEFTQIDCEMSFVEQEDVMSMIEGL 259

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           +    +            +         +T AEA ++Y   D   T    +  D
Sbjct: 260 LEAIFKEVL---------DVELALPLPKMTYAEAMSKY-GSDKPDTRFGYELTD 303



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 44/137 (32%), Gaps = 14/137 (10%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR-----FTKRFELYACNIELC 272
              +    +              +P       ++   +         K +++     E+ 
Sbjct: 431 LLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKSSLRAKAYDIVLNGYEIG 490

Query: 273 NACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQSSGIAMGFDRL 329
                + +   Q   F      K   + E    ++    L       P  +G+A G DRL
Sbjct: 491 GGSVRISNSDVQSRMF------KALGFTEERANEKFGYLLEAFKYGTPPHAGLAFGLDRL 544

Query: 330 VMLVTGANNINEVIWTP 346
           VML+ G +NI EVI  P
Sbjct: 545 VMLLAGTDNIREVIAFP 561


>gi|114770404|ref|ZP_01447942.1| aspartyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114549241|gb|EAU52124.1| aspartyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 593

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 13/198 (6%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R+ +  S+R       F E  +  +   SP      R F     +    
Sbjct: 134 RRETLHNNIILRSNVIKSIRNRMDSQGFNEFQTPIITASSPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ AG +K F  A  +R+ +      P +F  L+   +    +
Sbjct: 188 PGKFYALPQAPQQFKQMIMVAGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVEQQ 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      +++   E         +N     + +       +       I +    D+  
Sbjct: 248 DVFNTIEPVLKGIFEEFGGGRSISKNWPQISYRDSALWYGTDKPDLRNPIKMQIVSDHFK 307

Query: 191 QPDRHLLYLQAQQAGIRV 208
           +    +     +  G  V
Sbjct: 308 ESGFAIFAKLLENEGTEV 325



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 17/159 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  I       ++ I    + EK      I+        P    A  +    +     +
Sbjct: 419 EELKITNKDSFEFAWIVDFPMYEKDSETGKIDFSHNPFSMPQGGMAALDAEDPETILGYQ 478

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL-T 314
           ++L     EL +      +P      FE      +E+ ++              +     
Sbjct: 479 YDLACNGYELISGAIRNHNPEIMYKAFEIAGYPNEEVNKRFGGM----------VNAFTY 528

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   G A G DR+VML+   +NI +VI  P +Q  ++
Sbjct: 529 GAPPHGGCAAGIDRIVMLLANEDNIRQVIMFPMNQRAED 567


>gi|159473655|ref|XP_001694949.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158276328|gb|EDP02101.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 605

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 29/194 (14%)

Query: 13  DFHYRRRPFLLKRNMIQS----------SLREYFVEN-QFIEIDSMSLQ-YSPGNET-HI 59
           D   + R   L+R  + +           +R +  +   F+E+++  L   +P     ++
Sbjct: 133 DTRLKNRVLDLRRPKMAANLRLRHKLLRLIRTFLEDRHGFMEVETPILTRSTPEGARDYL 192

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
                +      + +      SP+   + L+ AG ++ +  A  +R+ +     QPEFT 
Sbjct: 193 VPSRVQPGEWYALPQ------SPQLFKQMLMVAGMDRYYQIARCFRDEDLRADRQPEFTQ 246

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L+   +    + L      ++              Q +     +    I+ AEA  +Y  
Sbjct: 247 LDIEVSFMDDKALQSLMEELV---------LQVFDQILGVTLAAPFRRISYAEAMDKY-G 296

Query: 180 IDLGTTLDNPDQPD 193
            D        +  D
Sbjct: 297 SDKPDLRYGLEFVD 310



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 49/163 (30%), Gaps = 7/163 (4%)

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
             D   +    +  L  +  G+    D +   +    + E                 P P
Sbjct: 414 PRDTVHRALDRVRQLLGRDLGLIKPGDHSLLWVVDFPMFEFNPEEGRYQAIHHPFTAPRP 473

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           +   +            ++L    +E+      +     Q+  FE           E   
Sbjct: 474 DDWASG--DYVNARALAYDLVYNGVEIGGGSLRIYRRDIQQKVFE----LIGLTPAEAQS 527

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                L C     P   G+A G DRL ML+ GA +I +VI  P
Sbjct: 528 KFGYLLDCFEYGAPPHGGLAFGLDRLAMLLAGAPSIRDVIAFP 570


>gi|329935902|ref|ZP_08285704.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329304593|gb|EGG48469.1| aspartyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 587

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG    +   +  I    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRAGHFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMDALENQDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    +EL +      +P      FE    E + +  E   +    L  L 
Sbjct: 465 LDILAWQYDIVCNGVELSSGAIRNHEPDIMLKAFEIAGYEHETVEREFAGM----LRALR 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 521 FGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 69/224 (30%), Gaps = 23/224 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R  + S++R       F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRTAVISAIRHKMAAMNFNEMATPILTATSPEG---ARDFVVPSRLN--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
                   +    E     +F          S    I   EA A+Y +   DL   L+  
Sbjct: 245 ----EQEDVFQPIEKLMTDLFEEFGGGRPVTSPFPRIPFREAMAKYGSDKPDLRAKLELV 300

Query: 190 DQPDRHLLYLQAQQAGIRVAH------DDTWSDIFSRILIEKIE 227
           D  D          AG  V               F ++    +E
Sbjct: 301 DLTDIFAGSEFKAFAGKHVRALPVPDVAAQPRKFFDQLGEYAVE 344


>gi|239787493|emb|CAX83963.1| Aspartyl-tRNA synthetase [uncultured bacterium]
          Length = 600

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 26/184 (14%)

Query: 13  DFHYR------RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R      RR      +L R+ + +SLR   +E  FIE  +  L   SP     ++ 
Sbjct: 123 DMRLRYRFLDLRRETVHRNMLLRSNVIASLRRRMLEQGFIEYQTPILTASSPEGARDYLV 182

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTM 119
                      + +      +P+   + L+ AG ++ F  A  +R+ +      P EF  
Sbjct: 183 PSRIHPGKFYALPQ------APQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQ 236

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L++  +  +         ++      V       F N      +    I   E+  +Y +
Sbjct: 237 LDFEMSFVT-------QDDVFNAIEPVLAGVFEEFANGRQVSKAPFPRIPYDESMLKYGS 289

Query: 180 IDLG 183
               
Sbjct: 290 DKPD 293



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 54/183 (29%), Gaps = 17/183 (9%)

Query: 181 DLGTTLDNPDQPDRHLLYL------QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
           D        D+PD    +          +  +   +   +         E+      I  
Sbjct: 390 DGDAVFFACDKPDAAAAFAGQVRARVCDELDLLEKNVFKFCWTVDFPFYERDPETGKIGF 449

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
                  P       N          ++++    IEL +       P      FE     
Sbjct: 450 SHNPFSMPQGGLEALNTKDPLSLKAYQYDIVCNGIELSSGAIRNHLPEIMYRAFEI---- 505

Query: 295 KKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
               Y   + ++  F   L       P   G A G DR+VML+    NI EVI  PF+Q 
Sbjct: 506 --AGYERAH-VETHFGGMLNAFRFGAPPHGGAAPGVDRIVMLLADEPNIREVILFPFNQQ 562

Query: 351 NQE 353
            Q+
Sbjct: 563 AQD 565


>gi|71024657|ref|XP_762558.1| hypothetical protein UM06411.1 [Ustilago maydis 521]
 gi|46101951|gb|EAK87184.1| hypothetical protein UM06411.1 [Ustilago maydis 521]
          Length = 779

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 18/130 (13%)

Query: 14  FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFST 64
             YR    RRP L      R+ I  ++R +  +N F+EI++   L  +P      R F  
Sbjct: 219 ARYRYLDLRRPSLAENIRLRSRITHAIRNHLYDNGFLEIETPVLLSSTPEG---AREFLV 275

Query: 65  ELI---IQDHIRKPLY--LQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
                   +   +P +  L  SP+   + L+ +   +K F  A  +R+ +     QPEFT
Sbjct: 276 PTRLSSSSNAQAEPHFYALPQSPQQPKQLLIASGVTDKYFQIAKCFRDEDGRKDRQPEFT 335

Query: 119 MLEWYRAHES 128
            ++      S
Sbjct: 336 QIDLEMGFVS 345



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 5/88 (5%)

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           + ++L     E+      +     Q+      ++                L  L    P 
Sbjct: 658 QHYDLVLNGQEIGGGSVRIHSRALQQCVLAHILEL----TPSEQARFSHLLHALDCGAPP 713

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +GIA+GFDRL+ ++    +I +VI  P
Sbjct: 714 HAGIALGFDRLMAILCRTESIRDVIAFP 741


>gi|157828061|ref|YP_001494303.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|157800542|gb|ABV75795.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 612

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 9/203 (4%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ I S LR       F E  +  L   SP      R F   
Sbjct: 138 KHRFLDLRREKLHNNIILRSQIISHLRHLMTARGFTEFQTPILTASSPEG---ARDFLVP 194

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+  
Sbjct: 195 SRMH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 251

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E +      ++         K  S     C P++E      ++       I + 
Sbjct: 252 MSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIIIA 311

Query: 184 TTLDNPDQPDRHLLYLQAQQAGI 206
              +     D  +     ++  I
Sbjct: 312 DVTEIFRDSDFTIFRENIKKGSI 334



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA----PESALANIYPADPR 257
           ++  +       +  I      E  E    I+        P                   
Sbjct: 428 EELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELLEL 487

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT 314
              ++++    IEL +       P      F          Y+E   +D+ F   +    
Sbjct: 488 TAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSI------AGYSEE-EVDKRFGGMIRAFK 540

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 541 FGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 580


>gi|222148190|ref|YP_002549147.1| aspartyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|254781709|sp|B9JV61|SYD_AGRVS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221735178|gb|ACM36141.1| aspartyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 601

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 72/222 (32%), Gaps = 20/222 (9%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    +KR  I SS+R    E  F E  +  L 
Sbjct: 111 PLPVFGEPDYPEDVRLKYRFIDLRRETLHKNIVKRTQIISSMRNGMSELGFAEYTTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             SP      R F     I +   +   L  +P+   + L+ AG ++ F  A  +R+ + 
Sbjct: 171 ASSPEG---ARDFLVPSRIHE--GQFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDP 225

Query: 110 GCLHQP-EFTMLEWYRAHESYEQ-LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                P EF  L+   +  + E         + +   + A  K  + Q            
Sbjct: 226 RADRLPGEFYQLDVEMSFVTQEDVWTTMEPMMTKVFEQFAEGKPVTKQWPRIPYDEAIRK 285

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
               +   R   +    T    D   +    + A    + V 
Sbjct: 286 YGSDKPDLRNPIVMQAVTEHFADSGFKIFASMIAANPKVEVW 327



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 49/163 (30%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +          I      E  E    I+        P       +    
Sbjct: 418 EARTRAGEELNLIDRDRFEMCWIVDFPFYEWSEEEKKIDFAHNPFSMPQGGLEAFDSQDP 477

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 +++      E+ +       P       E  ++  +K+      ++E F     
Sbjct: 478 LTLKAYQYDAVCNGFEIASGSIRNQSP-------ELMVKAFEKVGLSQTDVEERFGGLYR 530

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G A G DR+VML+ GA N+ E+   P +Q  Q+
Sbjct: 531 AFQYGAPPHGGCAFGIDRVVMLLVGAKNLREISLFPMNQQAQD 573


>gi|114565510|ref|XP_001150205.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 6
           [Pan troglodytes]
          Length = 624

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L          ++ ++L     E+      + +   QR+     ++       
Sbjct: 487 HPSDIHLLYT--EPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLK------- 537

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ LVTG+ +I +VI  P
Sbjct: 538 EDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSRSIRDVIAFP 584



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 187 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGKF---YSLP 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T AEA A Y   D   T       D
Sbjct: 301 LQY----------SWPNDKDPVVVPFPTMTFAEALATY-GTDKPDTRFGMKIID 343


>gi|20987993|gb|AAH30041.1| Nars2 protein [Mus musculus]
          Length = 250

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 71/261 (27%), Gaps = 21/261 (8%)

Query: 90  LAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
           ++    ++F F   +R        H  EF M+E   +     Q +   M  +  A     
Sbjct: 1   MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMVEAEISFVESLQDLMQVMEELFKATTEMV 60

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                     C+ F         E   +          +N             +QA    
Sbjct: 61  LSHCPEDVELCHQFIAAGQKGRLEHMLK----------NNFLIISYTEAIEILKQASQNF 110

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
           A    W         + +  + G      +  YP+           D        +    
Sbjct: 111 AFTPKWGVDLQTEHEKYLVRHCGNIPV-FVINYPSELKPFYMRENEDGPQNTVAAV---- 165

Query: 269 IELCNACDELLDPIEQRHRFE-KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGF 326
             L     EL     +  R+   E +  +    + Y     +L           G  MGF
Sbjct: 166 DLLVPGVGELFGGSLREERYHVLEQRLARSGLTKAYQ---WYLDLRKFGSVPHGGFGMGF 222

Query: 327 DRLVMLVTGANNINEVIWTPF 347
           +R +  + G +NI +VI  P 
Sbjct: 223 ERYLQCILGVDNIKDVIPFPR 243


>gi|7022598|dbj|BAA91658.1| unnamed protein product [Homo sapiens]
          Length = 463

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L          ++ ++L     E+      + +   QR+     ++       
Sbjct: 326 HPSDIHLLYT--EPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLK------- 376

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ LVTG+ +I +VI  P
Sbjct: 377 EDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFP 423



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 5   LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGKF---CSLP 58

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 59  QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 118

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T AE  A Y   D   T       D
Sbjct: 119 LQY----------SWPNDKDPVVVPFPTMTFAEVLATY-GTDKPDTRFGMKIID 161


>gi|10434343|dbj|BAB14228.1| unnamed protein product [Homo sapiens]
          Length = 463

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L          ++ ++L     E+      + +   QR+     ++       
Sbjct: 326 HPSDIHLLYT--EPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLK------- 376

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ LVTG+ +I +VI  P
Sbjct: 377 EDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFP 423



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 5   LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGKF---YSLP 58

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 59  QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 118

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T AE  A Y   D   T       D
Sbjct: 119 LQY----------SWPNDKDPVVVPFPTMTFAEVLATY-GTDKPDTRFGMKIID 161


>gi|164662915|ref|XP_001732579.1| hypothetical protein MGL_0354 [Malassezia globosa CBS 7966]
 gi|159106482|gb|EDP45365.1| hypothetical protein MGL_0354 [Malassezia globosa CBS 7966]
          Length = 534

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/377 (12%), Positives = 100/377 (26%), Gaps = 56/377 (14%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETH---- 58
            R+ H++ R          R  ++ ++  +   N F ++    +  S    G E      
Sbjct: 171 RRESHFKARTPQFAALQRTRARMEHAMGAWMAANDFCKVHPPIITSSDCEGGGEIFQVVA 230

Query: 59  -------------IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
                        + +     +      +P YL  S +   +        +++     +R
Sbjct: 231 DADVPQNSQETMSLTSSRNGSLAAFWSGQPAYLTVSAQLHLEAYALG-LSRVWSLCPVFR 289

Query: 106 NGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                   H  EF MLE           + D    +R   +V    + S      +    
Sbjct: 290 AEGSATNRHLAEFWMLEAEL------CWLPDGEQALRMVLDVTESVLKSALQAAWHDERA 343

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            E +    A    A I+            R L                 W +        
Sbjct: 344 KEDMAFLGATYDAALINSPWPRLTYTDAVRLLRA--------HTKAPPVWGESLKSEHER 395

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF----------ELYACNIELCNA 274
            +  ++G      +  +P            +P                +  AC   L   
Sbjct: 396 WLASHMG--QPVFVTNFPTEIKPFYMREDPEPVILSDDVHPTESGSARKTVACFDLLVPQ 453

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMGFDRLVML 332
             EL+    +  R    MQ  +    +   +   +   L         G  +G +R +  
Sbjct: 454 VGELVGGSVREERHGVLMQRLRTSGLQASSL-TWYTDDLRRYGGAPHGGFGLGMERFLSW 512

Query: 333 VTGANNINEVIWTPFSQ 349
           VT   ++ +++  P  +
Sbjct: 513 VTHTFHVRDLVGFPRVK 529


>gi|254455582|ref|ZP_05069011.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082584|gb|EDZ60010.1| aspartyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 594

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 60/173 (34%), Gaps = 11/173 (6%)

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
            L+  ++         AQ   +   +   +  I    + E+ E    I         P  
Sbjct: 404 KLNELEKITALARDKIAQDLDLINDNIFAFCWIVDYPMFERDEKTNKIGFSHNPFSMPQG 463

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           +     +         ++++    IEL +       P      F          Y++   
Sbjct: 464 DLTDKQLEDPLNILAYQYDIVCNGIELSSGAIRNHKPELMYRLFSI------AGYDKKQ- 516

Query: 305 IDEDF---LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           +DE F   +  L+   P   GIA G DR+VML+    NI EV   P +Q+ Q+
Sbjct: 517 VDEKFSGMINALSFGAPPHGGIAPGIDRIVMLLANEKNIREVTMFPMNQNAQD 569



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 20/169 (11%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR+     ++ R+ + S +R       F+E  +  L   SP      R F     +   
Sbjct: 133 LRRKKIHENIILRSKVISFIRNEMTSAGFLEFQTPILTSSSPEG---ARDFLVPSRLN-- 187

Query: 72  IRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESY 129
                Y L  +P+   + ++ +G +K F  A  +R+ +      P EF  L+   +    
Sbjct: 188 -PGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDLEMSFVEQ 246

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           E +      ++    +  + K           + +   I+ A+A  +Y 
Sbjct: 247 EDVFNVVEKLLVNTFKKFSDKKL--------MYDQFPKISYADAMLKYG 287


>gi|21222206|ref|NP_627985.1| aspartyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|24212421|sp|Q9F323|SYD_STRCO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|10178901|emb|CAC08476.1| aspartyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 587

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG    +   +  I    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRAGHFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMDALENQDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    +EL +      +P      FE         Y+    ++ +F   L 
Sbjct: 465 LDILAWQYDIVCNGVELSSGAIRNHEPEIMLKAFEI------AGYD-AETVEREFAGMLR 517

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 518 AFRFGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R  + SS+R   V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRTSVISSIRSKMVALGFNEMATPILTATSPEG---ARDFVVPSRLH--A 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            +   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
                   +    E    ++F       +  S    I   EA  +Y +   DL   L+  
Sbjct: 245 ----EQEDVFRPIEQLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300

Query: 190 DQPDRHLLYLQAQQAGIRV 208
           D  D          AG  V
Sbjct: 301 DITDVFEGSEFKAFAGKHV 319


>gi|144899163|emb|CAM76027.1| Aspartyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 595

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 62/183 (33%), Gaps = 17/183 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R+ + + LR+  ++  F E  +  L   SP     ++            
Sbjct: 134 RREDVHANMMLRSEVIAYLRKAMLDQGFTEFQTPILTASSPEGARDYLVPARLHPGKFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ AG +K F  A  +R+        P EF  L++  ++ + +
Sbjct: 194 LPQ------APQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQLDFEMSYVTQD 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      ++    +   +             +    I  AE+  +Y   D     +  +
Sbjct: 248 DVFAAIEPVLEGVFKQFGKGRKVTP-------APFPRIPYAESMLKY-GSDKPDLRNPIE 299

Query: 191 QPD 193
             D
Sbjct: 300 IAD 302



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 59/198 (29%), Gaps = 15/198 (7%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA----HDDTWSDIFS 219
           EPE I   +  A+  + D      + + P      L   + G  +         +     
Sbjct: 375 EPERINAIKEAAKLNDGDAVFFACDKELPAAKFAGLVRTKIGNDLDLLEKDVFKFCWTVD 434

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
             + E  E    I+        P                  ++++    +EL +      
Sbjct: 435 FPMYELNEETGLIDFSHNPFSMPQGGMDALENQDPLTINAYQYDIVCNGVELSSGAIRNH 494

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQSSGIAMGFDRLVMLVTG 335
                   F          Y     ++E F   L       P   G A G DR+VML+  
Sbjct: 495 RADIMIKAFGI------AGYGPE-VVEEKFGGMLNAFRYGAPPHGGSAPGVDRIVMLLAD 547

Query: 336 ANNINEVIWTPFSQSNQE 353
             NI EVI  P +Q  Q+
Sbjct: 548 QPNIREVILFPMNQQAQD 565


>gi|62184723|ref|YP_219508.1| aspartyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81313092|sp|Q5L734|SYD_CHLAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62147790|emb|CAH63536.1| putative aspartyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 584

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 19/183 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLY 77
             L+ R+ +  + R+Y  +  F E+ +  L + +P     ++            + +   
Sbjct: 142 DRLVHRHKVMMACRQYMDKQGFTEVVTPILGKSTPEGARDYLVPSRIYPGSFYALPQ--- 198

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+  G ++ F  A  +R+ +     QPEF  ++   +  +   L     
Sbjct: 199 ---SPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQPEFAQIDIEMSFGTPNDLFPIIE 255

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            ++     V                     +T  EA   Y   D           D    
Sbjct: 256 QLVVEMFAVQG----------IKIDLPLPRMTYQEAKDLY-GTDKPDLRFGLQLHDCREH 304

Query: 198 YLQ 200
             +
Sbjct: 305 AKE 307



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 59/176 (33%), Gaps = 15/176 (8%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
               D  +Q   HL  L A++          +  I    L  K +  +           P
Sbjct: 396 AAPEDVANQSLDHLRRLIAKERNFYNEAQYNFVWITDFPLFAKEDGKICSEHHPFTS--P 453

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ----EKKKI 298
             E             +  ++L     E+ +    + +   Q   F          K+K 
Sbjct: 454 LDEDIPLLDKDPLSVRSSSYDLVLNGYEIASGSQRIHNADLQNKIFSILELSPESIKEKF 513

Query: 299 YNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                     F+  L+   P   GIA+G DR++M++TGA  I EVI  P +Q   +
Sbjct: 514 D--------FFIDALSFGTPPHLGIALGLDRIMMVLTGAEGIREVIAFPKTQKAAD 561


>gi|326329820|ref|ZP_08196140.1| aspartate--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325952406|gb|EGD44426.1| aspartate--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 594

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 69/192 (35%), Gaps = 27/192 (14%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D  Y+ R            +  R+    + R+    + F+EI++ +L   +P      R 
Sbjct: 117 DVRYKHRYLDLRRTAPGNAIRLRSKANKAARDVLAAHDFVEIETPTLTRSTPEG---ARD 173

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F     +Q        L  SP+   + L+  G E+ +  A A+R+ +     QPEFT L+
Sbjct: 174 FLVPARLQ--PGSWYALPQSPQLFKQLLMVGGMERYYQLARAYRDEDFRADRQPEFTQLD 231

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    + ++     I+    ++             +       +T A+A A+Y   D
Sbjct: 232 IEMSFVEQDDVIALGEEIVAALWKLIG----------YDVPLPLPRMTYADAMAKY-GSD 280

Query: 182 LGTTLDNPDQPD 193
                   +  +
Sbjct: 281 KPDLRFGIEITE 292



 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 15/112 (13%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQE 294
           + +P+   +            +++     E+      +     Q+  F      E+  +E
Sbjct: 450 FTSPQDVESFDKDPGNAIAWAYDIVCNGNEIGGGSIRIHREDVQKRVFDLMGIGEEAAEE 509

Query: 295 KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           K     E +             P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 510 KFGFLLEAFKF---------GAPPHGGIAFGWDRVVALLAGTDSIRDVIAFP 552


>gi|325963408|ref|YP_004241314.1| aspartyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469495|gb|ADX73180.1| aspartyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 592

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 72/195 (36%), Gaps = 22/195 (11%)

Query: 11  NRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +   RRP     L  R+      RE   ++ F+E+++ +L   +P      R F  
Sbjct: 120 LKHRYLDLRRPGPARNLRLRSEANRVARELLHQDGFVEVETPTLTRSTPEG---ARDFVV 176

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +         L  SP+   + L   G EK +  A  +R+ +     QPEFT L+   
Sbjct: 177 PARL--APGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQPEFTQLDIEA 234

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    + ++    +I++            ++ ++    +  + IT  +A AR+   D   
Sbjct: 235 SFVEQDDIIALGESIVKAL----------WKLIDVEIPTPIQRITYHDAMARF-GSDKPD 283

Query: 185 TLDNPDQPDRHLLYL 199
                +  +    + 
Sbjct: 284 LRFGVELTELTEFFK 298



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 17/114 (14%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE------KEM 292
           + +P+    + +  DP       +++     E+      +     Q   FE      ++ 
Sbjct: 450 FTSPKPEYMDSFDTDPESALAYAYDIVCNGNEIGGGSIRIHQSDVQERVFEVMGLSHEDA 509

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           QEK     E +             P   GIA G+DR+V L++G ++I +VI  P
Sbjct: 510 QEKFGFLLEGFK---------YGAPPHGGIAFGWDRVVALLSGVDSIRDVIAFP 554


>gi|256786704|ref|ZP_05525135.1| aspartyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289770599|ref|ZP_06529977.1| aspartyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289700798|gb|EFD68227.1| aspartyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 587

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG    +   +  I    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRAGHFEENVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGMDALENRDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    +EL +      +P      FE         Y+    ++ +F   L 
Sbjct: 465 LDILAWQYDIVCNGVELSSGAIRNHEPEIMLKAFEI------AGYD-AETVEREFAGMLR 517

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 518 AFRFGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R  + SS+R   V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRTSVISSIRSKMVALGFNEMATPILTATSPEG---ARDFVVPSRLH--A 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            +   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
                   +    E    ++F       +  S    I   EA  +Y +   DL   L+  
Sbjct: 245 ----EQEDVFRPIEQLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300

Query: 190 DQPDRHLLYLQAQQAGIRV 208
           D  D          AG  V
Sbjct: 301 DITDVFEGSEFKAFAGKHV 319


>gi|227503533|ref|ZP_03933582.1| aspartyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227075569|gb|EEI13532.1| aspartyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 454

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P+    + +  +P       +++     E+      +     Q+  FE         
Sbjct: 302 FTSPKPEWIDSFDENPGEATAYAYDIVCNGNEIGGGSIRIHQEDVQKRVFEVMGI----G 357

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 358 DEEAQEKFGFLLDAFSYGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 406



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 16/165 (9%)

Query: 36  FVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
             ++ F EI++ +L   +P      R F     +         L  SP+   + L+ AG 
Sbjct: 2   LDKHDFAEIETPTLTRSTPEG---ARDFLVPARL--KPGSWYALPQSPQLFKQLLMVAGM 56

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
           E+ +  A  +R+ +     QPEFT L+   +    + ++     I++   ++    I + 
Sbjct: 57  ERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVDQDDVIALGEEIVKELWKLIGYDIQT- 115

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                        +T A+A   Y +       D            
Sbjct: 116 ---------PIPRMTYADAMKYYGSDKPDLRFDIKIVECTEFFKD 151


>gi|194246665|ref|YP_002004304.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807022|emb|CAP18458.1| Aspartyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 574

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 51/150 (34%), Gaps = 17/150 (11%)

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYP--APESALANIYPADPRFTKRFELYACNI 269
           D   +    I    +              +P  AP+            F + ++L     
Sbjct: 413 DYNRESLLWITDFPLFEFDVKTNRYYSTHHPFTAPKDISIFKKNPIKSFAQSYDLVWNGY 472

Query: 270 ELCNACDELLDPIEQRHRFE-----KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIA 323
           E+      + D   Q+  F+     +   EKK            F+  L    P   GIA
Sbjct: 473 EIGGGSLRINDYSIQQLMFKTLGFTEVEIEKKFG---------FFIESLKYGTPPHGGIA 523

Query: 324 MGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           +G DRL ML    NNI  VI  P +QS ++
Sbjct: 524 LGLDRLSMLFNKTNNIRNVIGFPKTQSAKD 553



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 72/196 (36%), Gaps = 20/196 (10%)

Query: 16  YRRRP---FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQD 70
            RR     FL+ R+ I   +R+  + N F+E+++  L   +P     ++           
Sbjct: 132 LRRNEMKLFLITRHNITQIIRQNLLVNDFLELETPLLSKSTPEGARDYLVPSRLYAGKFY 191

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            + +      SP+   +  + +G E+ F  A  +R+ +     QPEFT ++   +  + +
Sbjct: 192 ALPQ------SPQIFKQLYMISGFERYFQIARCFRDEDLRSDRQPEFTQIDIETSFLTKK 245

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M    NI+              +    N  S    +T  +A   Y         + P 
Sbjct: 246 NIMHLIENIMI---------DLFQKIWYKNLSSPFLTLTYEKAINTYGTDKPDLRFELPI 296

Query: 191 QPDRHLLYLQAQQAGI 206
           +   H L  +  Q  I
Sbjct: 297 ENITHYLKQEFIQKNI 312


>gi|114565506|ref|XP_524974.2| PREDICTED: aspartyl-tRNA synthetase, mitochondrial isoform 7 [Pan
           troglodytes]
          Length = 645

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L          ++ ++L     E+      + +   QR+     ++       
Sbjct: 508 HPSDIHLLYT--EPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLK------- 558

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ LVTG+ +I +VI  P
Sbjct: 559 EDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSRSIRDVIAFP 605



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 187 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGA---KEFLVPSREPGKF---YSLP 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T AEA A Y   D   T       D
Sbjct: 301 LQY----------SWPNDKDPVVVPFPTMTFAEALATY-GTDKPDTRFGMKIID 343


>gi|165932758|ref|YP_001649547.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|165907845|gb|ABY72141.1| aspartyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 615

 Score = 91.6 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 61/195 (31%), Gaps = 18/195 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ I S LR       F E  +  L   SP      R F   
Sbjct: 141 KHRFLDLRREKLHNNIILRSQIISHLRHLMTARGFTEFQTPILTASSPEG---ARDFLVP 197

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+  
Sbjct: 198 SRMH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 254

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  +           +    E     +F+         +    I   E+  +Y   D  
Sbjct: 255 MSFVT--------QEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKY-GSDKP 305

Query: 184 TTLDNPDQPDRHLLY 198
              +     D   ++
Sbjct: 306 DLRNPIIIADVTEIF 320



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 52/167 (31%), Gaps = 15/167 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA----PESALAN 250
            +     ++  +       +  I      E  E    I+        P            
Sbjct: 424 KVRMRLGEELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKT 483

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF- 309
                     ++++    IEL +       P      F          Y+E   +D+ F 
Sbjct: 484 TEELLELTAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSI------AGYSEE-EVDKRFG 536

Query: 310 --LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             +       P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 537 GMIRAFKFGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 583


>gi|302336148|ref|YP_003801355.1| aspartyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319988|gb|ADK68475.1| aspartyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 589

 Score = 91.6 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 63/182 (34%), Gaps = 19/182 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
              +    L  R+    ++R+   +  F+E+++ +L + +P      +    T+      
Sbjct: 139 RRPKMMANLRLRSDFTFAIRQALHDRAFMEVETPALFKSTPEGARDFLVPSRTQPGHFYA 198

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT ++   +    + 
Sbjct: 199 LPQ------SPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQPEFTQVDVEMSFVEQDD 252

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +M    +++  A                        +   EA   Y   D   T    + 
Sbjct: 253 VMAALEDVLAEAFSKVG----------VQMQLPLRRLPYWEAMDTY-GTDKPDTRFGMEL 301

Query: 192 PD 193
            D
Sbjct: 302 HD 303



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 48/158 (30%), Gaps = 14/158 (8%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A   G+ V     +  +    L    E              P                + 
Sbjct: 419 ADALGL-VREGHDFLWVVDFPLFHWDEDRGAYAAEHQPFTQPMEADVELLDADPLSVGSH 477

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-E 315
            ++      E       + D   Q    EK    E + +++            +  L   
Sbjct: 478 TYDFVMDGFEAGGGGMRIHDADLQMRILEKLGFTEERAREQFG--------FLMEALKFG 529

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A+G DR+ ML+ G+++I EV+  P + S  +
Sbjct: 530 APPMGGFALGLDRVCMLLAGSDSIREVMAFPKTSSGSD 567


>gi|266626100|ref|ZP_06119035.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288861994|gb|EFC94292.1| aspartate--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 192

 Score = 91.6 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 68/193 (35%), Gaps = 28/193 (14%)

Query: 13  DFHYRRRPFLLKRNMIQSSL----------REYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   + R   L+R  IQ ++          R +  E  F EI++ +L   +P     ++ 
Sbjct: 8   ELRLKYRYLDLRRPDIQRNIMVRSQAAIITRAFLAEEGFFEIETPTLIKSTPEGARDYLV 67

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ +G ++ F  A  +R+ +     QPEFT +
Sbjct: 68  PSRVHPGSFYALPQ------SPQLFKQLLMCSGYDRYFQLARCYRDEDLRADRQPEFTQI 121

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    E ++     ++         K    +  N +       +T  EA  R+   
Sbjct: 122 DLELSFVDVEDVLDVNERLL---------KRLFKEICNFDLELPIPRMTWHEAMDRF-GS 171

Query: 181 DLGTTLDNPDQPD 193
           D        +  +
Sbjct: 172 DKPDLRFGMELKN 184


>gi|332664736|ref|YP_004447524.1| aspartyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333550|gb|AEE50651.1| aspartyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 594

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 72/221 (32%), Gaps = 12/221 (5%)

Query: 16  YRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDH 71
            RR P    L+ R+ +   +R++     FIE+++  L   +P      R F     +   
Sbjct: 131 LRRSPVQNNLIFRSKLALEVRKFLSNQNFIEVETPFLIKSTPEG---ARDFVVPSRMN-- 185

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             +   L  SP+   + L+ AG ++ F     +R+ +     QPEFT ++   A  + E 
Sbjct: 186 PGQFYALPQSPQTFKQILMVAGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVTRED 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++     + R      +       +     + +   +  ++       +      D    
Sbjct: 246 ILNTFEALTRHLF--LHTLGLELGDFPRMSYDDALRLYGSDKPDLRFGMPFADLTDLTKG 303

Query: 192 PDRHLLYLQAQQAGIRVAHD-DTWSDIFSRILIEKIEPNLG 231
               +        GI      D        +      P +G
Sbjct: 304 RGFVVFDSAETVIGINAKGQADYTRKQVDELTEWVKRPQIG 344



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 9/157 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP----ESALAN 250
            L     ++ G+    D     +    L+E  E              P P    + A  +
Sbjct: 403 ELRLEMGRRLGLMKPGDFKPLWVLDFPLLEWDEDTERFYAMHHPFTSPKPDDVVKMASDD 462

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
                      ++L    +E+      + D   Q   F            E        L
Sbjct: 463 RNVLKGLRADAYDLVLNGVEIGGGSIRIYDRDLQMKNF----SLLGFSTEEAEAQFGFLL 518

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   GIA GFDRL  ++ G N+I + I  P
Sbjct: 519 GAFEFGAPPHGGIAFGFDRLCSVMNGQNSIRDFIAFP 555


>gi|150024383|ref|YP_001295209.1| aspartyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|166225345|sp|A6GWB6|SYD_FLAPJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|149770924|emb|CAL42389.1| Aspartate--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 583

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 79/252 (31%), Gaps = 12/252 (4%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    LL R+ +   +R+Y  +  F E+++  L   +P      R F     + +  
Sbjct: 133 RRNPVKNSLLFRHKVAMEVRKYLSDLDFCEVETPYLIKSTPEG---ARDFVVPSRMNE-- 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDI 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     + R   +    K    +      ++        +       ++ G   +     
Sbjct: 248 LNIFEGLTRHLLKEL--KGIEVEKFPRMTYNHAMKTYGNDKPDIRFGMEFGELNEYAKHK 305

Query: 193 DRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
           D  +         I V    +        ++     P +G +    +          +  
Sbjct: 306 DFPVFNAAELVVAIAVPGVGEYSRKEIDALIEWVKRPQVGASGMVYVKCNEDGTYKSSVD 365

Query: 252 YPADPRFTKRFE 263
              D      + 
Sbjct: 366 KFYDQGDLSHWA 377



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 48/157 (30%), Gaps = 13/157 (8%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A + G+R   +     +    L+E  E +   +        P PE         
Sbjct: 404 ALRMELATRLGLRNPAEFAPLWVVDFPLLEFDEESGRYHAMHHPFTSPKPEDMHLLETDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
                  +++     E+      + D   Q   F+     E + K +            +
Sbjct: 464 KSVRANAYDMVLNGNEIGGGSIRIHDKNTQALMFKYLGFTEEEAKNQFG--------FLM 515

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                  P   G+A G DRLV ++ G   I + I  P
Sbjct: 516 DAFQFGAPPHGGLAFGLDRLVAILGGQETIRDFIAFP 552


>gi|159473653|ref|XP_001694948.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158276327|gb|EDP02100.1| aspartyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 714

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 57/162 (35%), Gaps = 19/162 (11%)

Query: 35  YFVEN-QFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
           +  +   F+E+++  L   +P     ++     +      + +      SP+   + L+ 
Sbjct: 274 FLEDRHGFMEVETPILTRSTPEGARDYLVPSRVQPGEWYALPQ------SPQLFKQMLMV 327

Query: 92  AGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI 151
           AG ++ +  A  +R+ +     QPEFT L+   +    + L      ++           
Sbjct: 328 AGMDRYYQIARCFRDEDLRADRQPEFTQLDIEVSFMDDKALQSLMEELV---------LQ 378

Query: 152 FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
              Q +     +    I+ AEA  +Y   D        +  D
Sbjct: 379 VFDQILGVTLAAPFRRISYAEAMDKY-GSDKPDLRYGLEFVD 419



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 49/163 (30%), Gaps = 7/163 (4%)

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
             D   +    +  L  +  G+    D +   +    + E                 P P
Sbjct: 523 PRDTVHRALDRVRQLLGRDLGLIKPGDHSLLWVVDFPMFEFNPEEGRYQAIHHPFTAPRP 582

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           +   +            ++L    +E+      +     Q+  FE           E   
Sbjct: 583 DDWASG--DYVNARALAYDLVYNGVEIGGGSLRIYRRDIQQKVFE----LIGLTPAEAQS 636

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                L C     P   G+A G DRL ML+ GA +I +VI  P
Sbjct: 637 KFGYLLDCFEYGAPPHGGLAFGLDRLAMLLAGAPSIRDVIAFP 679


>gi|167567487|ref|ZP_02360403.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 456

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 17/164 (10%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQT 80
           + R+ I + LR+   E  F E  +  L   SP      +    T       + +      
Sbjct: 1   MLRSAIVAELRQAMWEAGFTEFQTPILTASSPEGARDFLVPSRTHPGKFYALPQ------ 54

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNI 139
           +P+   +  + +G ++ F  A  +R+ +      P EF  L+   +    E +      I
Sbjct: 55  APQQFKQLAMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVDQEDVFSTIEPI 114

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           IR   +              +   +   I   EA  RY +    
Sbjct: 115 IRGIFQKFG--------NGFSVTEKFPRIPYGEAIRRYGSDKPD 150



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 56/166 (33%), Gaps = 13/166 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP----APESALAN 250
            L    A +  +       +  I    + E  E    I+ C      P        A   
Sbjct: 267 ELRQHLATKLDLIAKQRFEFCWITDFPMYEWAEKEQRIDFCHNPFSLPQGGFEALEAAVT 326

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED-- 308
           +         ++++    IEL +       P      FE         Y      D+   
Sbjct: 327 VEQQLALKAYQYDIVCNGIELSSGAIRNHVPEIMYKAFEI------AGYRPADLEDKFGG 380

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            L  L    P   GIA G DR+VML+ GA+N+ +V+  P +Q  ++
Sbjct: 381 MLRALQFGAPPHGGIAPGIDRIVMLLAGASNLRDVVMFPMNQQGED 426


>gi|114326876|ref|YP_744033.1| aspartyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114315050|gb|ABI61110.1| aspartyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 603

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 54/173 (31%), Gaps = 16/173 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    ++ R  + +SLR   +E  F E  +  L   SP      R F     +    
Sbjct: 142 RRERVHRNMMLRAQVIASLRRRMIEQGFTEFQTPILTASSPEG---ARDFLVPARLH--- 195

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   +  + AG ++ F  A  +R+        P EF  L++  +  +  
Sbjct: 196 PGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFEMSFAT-- 253

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
                  ++      V  Q    F N           I    A   Y +    
Sbjct: 254 -----QEDVFAALEPVMAQVFEEFSNGREVTKPPFPRIPYETAMLEYGSDKPD 301



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 11/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           Q+  +   ++  +  I    + E  E    I+        P       +          +
Sbjct: 425 QELNLIAQNEFRFCWIIDFPMYELNEETGQIDFSHNPFSMPQGGLDALDNQDPLTIKAYQ 484

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           +++    IEL +       P      FE         Y     ++  F   L       P
Sbjct: 485 YDIVCNGIELSSGAIRNHRPDLMIRAFEI------AGY-PASEVEARFGGMLNAFRYGAP 537

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 538 PHGGAAPGIDRMVMLLADEPNIREVILFPLNQQGED 573


>gi|29839845|ref|NP_828951.1| aspartyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|31340507|sp|Q46175|SYD_CHLCV RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29834192|gb|AAP04829.1| aspartyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 584

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 58/183 (31%), Gaps = 19/183 (10%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLY 77
             L+ R+ +  + R+Y  +  F E+ +  L + +P     ++            + +   
Sbjct: 142 DRLIYRHKVMLACRQYMDKQGFTEVVTPVLGKSTPEGARDYLVPSRIYPGSFYALPQ--- 198

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+  G ++ F  A  +R+ +     QPEF  ++   +  + + L     
Sbjct: 199 ---SPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQPEFAQIDIEMSFATPDDLFPIIE 255

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            ++     V                     +T  EA   Y   D           D    
Sbjct: 256 QLVVEMFSVQG----------IKIDLPLPRMTYQEAKDLY-GTDKPDLRFGLQLRDCREH 304

Query: 198 YLQ 200
             Q
Sbjct: 305 AKQ 307



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 58/196 (29%), Gaps = 35/196 (17%)

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                 +    D  +L L A    I     D    +  +      E          +  +
Sbjct: 377 FDAMFADFSAKDNDILLLIAAPESIANQSLDHLRRLIGKERNLYNESQYNF---VWITDF 433

Query: 242 PAPESALANIYPADPRFTKR-------------------FELYACNIELCNACDELLDPI 282
           P        I      FT                     ++L     E+ +    + +  
Sbjct: 434 PLFAKEEGKICSEHHPFTSPLDEDISLLDTDPLSVRSSSYDLVLNGYEIASGSQRIHNAD 493

Query: 283 EQRHRFEKEMQ----EKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGAN 337
            Q   F          K+K           F+  L+   P   GIA+G DR++M++TGA 
Sbjct: 494 LQNKIFSILELSPESIKEKFG--------FFIDALSFGTPPHLGIALGLDRIMMVLTGAE 545

Query: 338 NINEVIWTPFSQSNQE 353
            I EVI  P +Q   +
Sbjct: 546 GIREVIAFPKTQKAAD 561


>gi|198433016|ref|XP_002131496.1| PREDICTED: similar to aspartyl-tRNA synthetase 2, mitochondrial
           [Ciona intestinalis]
          Length = 638

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 66/176 (37%), Gaps = 19/176 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  L  R+ + S +R+   EN F+E+++ +L   +PG     R F           K   
Sbjct: 187 QQNLRLRSKVLSKMRKSLEENCFVEVETPTLFHPTPGG---AREFIVPSSSN--PGKFYS 241

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+  G ++ + FA  +R+       Q EFT L+   +      ++K   
Sbjct: 242 LPQSPQQLKQLLMIGGVDRYYQFARCYRDEPFKRDRQVEFTQLDIEMSFVDVNDVIKLSE 301

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
            +I+ +                      + IT  +A ++Y   D   T       D
Sbjct: 302 EVIKSS------------WPRKFSDESFKLITYDDAMSKY-GSDKPDTRFGMLLHD 344



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 13/146 (8%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY----PADPRFTKR 261
           I V H +   D F  ++   +              +P       +++          ++ 
Sbjct: 468 ISVKHRNVDLDQFLWVVDFPLFEADPYTGSLCTVHHPFTSPHPDDVHLLEVDPLKVRSQA 527

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           ++L     E+      + D   QR  F     +  ++           L  L +  P   
Sbjct: 528 YDLVLNGNEVGGGSIRIHDSKLQRQIFTLLNLDFTEL--------SYLLEALNSGAPPHG 579

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           GIA G DR++ ++ G   I +VI  P
Sbjct: 580 GIAFGIDRIMSILCGTETIRDVIAFP 605


>gi|295837689|ref|ZP_06824622.1| aspartate-tRNA ligase [Streptomyces sp. SPB74]
 gi|197695940|gb|EDY42873.1| aspartate-tRNA ligase [Streptomyces sp. SPB74]
          Length = 587

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A+++G        +  +    + EK E     +        P            
Sbjct: 405 AVRVEAAKRSGHFEEGVFRFCWVVDFPMFEKDEETGKTDFSHNPFSMPQGGMDALEHKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    IEL +      +P      FE    +++ + +E   +    L    
Sbjct: 465 LDILAWQYDIVCNGIELSSGAIRNHEPAIMLKAFEIAGYDRETVEHEFAGM----LRAFR 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 521 LGAPPHGGIAPGIDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 23/224 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R  + +++R+  V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRTAVIAAVRQKMVALGFNEMATPILTATSPEG---ARDFVVPSRLN--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            +   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GRFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
                   +    E    ++F+         S    I   E+  +Y N   DL   L+  
Sbjct: 245 ----EQEDVFQPVEKLMTELFTEFGGGREVTSPFPRIPFRESMLKYGNDKPDLRARLELH 300

Query: 190 DQPDRHLLYLQAQQAGIRVAH------DDTWSDIFSRILIEKIE 227
           D  D          AG  V               F ++    +E
Sbjct: 301 DISDVFAGSEFKAFAGKHVRALPVPDTAKQSRKFFDQLGEYAVE 344


>gi|164655283|ref|XP_001728772.1| hypothetical protein MGL_4107 [Malassezia globosa CBS 7966]
 gi|159102656|gb|EDP41558.1| hypothetical protein MGL_4107 [Malassezia globosa CBS 7966]
          Length = 715

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 78/242 (32%), Gaps = 18/242 (7%)

Query: 4   IPSQPWWNRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNET 57
           +P +    +  +   R       + +R+ +  + R +  ++ F EI++   L+ +P    
Sbjct: 183 LPKESLRAKHRYLDLRRSSLSENIRRRSRVAHAARCFLHDHAFTEIETPILLRSTPEG-- 240

Query: 58  HIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQP 115
             R F              Y LQ SP+   + L+ +   ++ F FA  +R+ +     QP
Sbjct: 241 -AREFLVPTRS--APEPQFYALQQSPQQPKQLLMVSGVTDRYFQFAKCFRDEDGRKDRQP 297

Query: 116 EFTMLEWYRAHESYE---QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           EFT L+   +                 IR   E   + +++         +    ++   
Sbjct: 298 EFTQLDMEMSFVCGHGDQPAWPLGGTEIRDVTEGLVRSMWTAAAQPYALPNPFPIMSYEH 357

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
           A   Y   D   T       +  +    +    I V        +  R     +    G 
Sbjct: 358 AMTTY-GSDKPDTRFGLRIANL-IPTCTSHALDILVLPQYESCKLSGRAKEALLLDQHGH 415

Query: 233 NC 234
            C
Sbjct: 416 RC 417



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQ 318
           + ++L     E+      + DP  QR  F   ++      +E        L  L    P 
Sbjct: 597 QHYDLVLNGAEIGGGSVRVHDPDLQRMIFRDILELS---DDEVGRF-SHLLHALESGAPP 652

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +GIA+GFDR + ++    +I +V+  P
Sbjct: 653 HAGIALGFDRFMAILCDTLSIRDVMAFP 680


>gi|254294268|ref|YP_003060291.1| aspartyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254042799|gb|ACT59594.1| aspartyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 605

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 19/211 (9%)

Query: 11  NRDFHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +   RR  L    + R+ + +SLRE      F E  +  L   SP      R F  
Sbjct: 126 LKHRYLDLRRETLHKNIMLRSNVITSLRERMKAQNFTEYQTPILTASSPEG---ARDFLV 182

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +     K   L  +P+   + ++ +G ++ F  A  +R+ +       EF  L+   
Sbjct: 183 PSRMH--PNKFYALPQAPQQFKQLMMVSGFDRYFQIAPCFRDEDLRADRSLEFYQLDIEM 240

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +  +         ++      V +     F        +    I   EA A+Y   D   
Sbjct: 241 SFVT-------QEDVFASIEPVMHGVFEEFSGDKTVTPAPFPRIPYLEAMAKY-GSDKPD 292

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWS 215
             +  +  D    ++   + G  +       
Sbjct: 293 LRNPIELGDVTEFFVDDSKTGFGIFAKIIAG 323



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 7/156 (4%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  I       +  I    + E  E N  ++        P     +      D +  + 
Sbjct: 426 EELDIVEKDIFKFCWIVDFPMYEWDEDNKKVDFSHNPFSMPQGGLEVLEAADTDEKKLEI 485

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
             L      +CN   EL     + HR +  ++  +        ++E+F   L       P
Sbjct: 486 --LAYQYDIVCNG-TELSSGAIRNHRPDIMIKAFELAGYGPEVVEEEFGGMLNAFRYGAP 542

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              GIA G DR+VML+  A+NI +VI  P +Q  Q+
Sbjct: 543 PHGGIAPGIDRMVMLLAEADNIRDVIMFPMNQQGQD 578


>gi|225013098|ref|ZP_03703512.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225002756|gb|EEG40738.1| aspartyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 586

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 91/292 (31%), Gaps = 19/292 (6%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    L+ R+ +  ++R Y  +  FI++++  L   +P      R F     + +  
Sbjct: 133 RRNPVKQKLMFRSKVSMAVRNYLTDAGFIDVETPYLIKSTPEG---ARDFVVPSRMNE-- 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++        E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMTFVEQEDI 247

Query: 133 MKDCMNIIRCAAEVANQ------KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
           +     + +   +             S+ N      ++   I     F    ++  G   
Sbjct: 248 LNQFEGLTQHLLKSIKGIEPKPFPRMSYDNAMKIYGNDKPDIRFGMTFCELNDLAQGKGF 307

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
              D  +  +     + A +          +   +   +I     I      D       
Sbjct: 308 GVFDSQELVVGIAVPKAAEMTRKE---IDGLIDWVKRPQIGAKGLIWVKCNADGSHKSSV 364

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
                     ++ +R +  A    +     +      Q      E+ E+  +
Sbjct: 365 DKFFNAEDLAQWAERCDAIA-GDLILVLSGDANTTRTQLSALRMELGERLGL 415



 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 46/153 (30%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     ++ G+R   +     +    L+E  E +   +        P P+         
Sbjct: 404 ALRMELGERLGLRKPEEFAPLWVTDFPLLEWDEESKRYHAMHHPFTSPKPDQLELLKTDP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                  ++L     E+      + D   Q   F+     K     E        +    
Sbjct: 464 GAVKANAYDLVLNGNEIGGGSIRIHDQALQSQMFDLLGFSKA----EAQAQFGFLMDAFQ 519

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA G DRLV ++ G   I + I  P
Sbjct: 520 FGAPPHGGIAFGLDRLVAILGGEETIRDFIAFP 552


>gi|301603688|ref|XP_002931512.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Xenopus
           (Silurana) tropicalis]
          Length = 620

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ I   +REY    + F+++++ +L + +PG     + F               L 
Sbjct: 192 LRLRSKIVMKMREYLCNLHGFVDVETPTLFKRTPGG---AKEFVVPTREPGKF---YSLP 245

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +   
Sbjct: 246 QSPQQFKQLLIIGGLDRYFQIARCYRDEGSKPDRQPEFTQVDIEMSFVD 294



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 15/156 (9%)

Query: 197 LYLQAQQAGIRVAHDD-----TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
              Q ++ G+ +            D    +  E  E  L          +P   + L   
Sbjct: 436 AAAQLEEYGVPLRDPTAFHFLWVVDFPLFLPKEDNELELESAHHPFTAPHPEDTALLHT- 494

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
                  ++ ++L     E+      + +   QR   +  ++       E   +    L 
Sbjct: 495 -DPAKVRSQHYDLVLNGSEVGGGSIRIHNSNLQRWVLQDVLK-------EDVSLLSHLLE 546

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L +  P   GIA+G DRL+ ++ GA +I +VI  P
Sbjct: 547 ALQSGAPPHGGIALGLDRLIAIIVGAPSIRDVIAFP 582


>gi|58040178|ref|YP_192142.1| aspartyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|62287513|sp|Q5FQ60|SYD_GLUOX RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|58002592|gb|AAW61486.1| Aspartyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 598

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 11/159 (6%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A +  +   +   +  +    + E  E    ++        P       N        
Sbjct: 415 KVATELDLIEKNAFRFCWVVDFPMYELNEETGKVDFSHNPFSMPQGGLEALNTQDPLTIN 474

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-T 314
             ++++    +EL +       P      FE         Y     ++E F   L     
Sbjct: 475 AYQYDIVCNGVELSSGAIRNHLPDVMLRAFEI------AGYGPE-VVEERFGGMLNAFRY 527

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   G A G DR+VML+    NI EVI  P +QS ++
Sbjct: 528 GAPPHGGAAPGVDRIVMLLADEPNIREVILFPLNQSGED 566



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 58/173 (33%), Gaps = 15/173 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ + +SLR+  +E  F E  +  L   SP      R F     +    
Sbjct: 134 RRDKMHQNIMLRSKVITSLRQRMIEQGFTEFQTPILTASSPEG---ARDFLVPARLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   +  + AG ++ F  A  +R+        P EF  L++  +  + E
Sbjct: 188 PGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEASRADRSPGEFYQLDFEMSFVTQE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +      ++         + +               I  A+A   Y +    
Sbjct: 248 DVFTVLEPVLAGVFNEFTPEGWK------ITDGAFPRIPYADAMRDYGSDKPD 294


>gi|256086206|ref|XP_002579294.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238664719|emb|CAZ35533.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 508

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 8/87 (9%)

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQS 319
            ++L     E+      + +P  Q++ F + ++E     +        FL  L +  P  
Sbjct: 395 HYDLVCNGQEVGGGSIRVHNPEVQKYIFTEILKE----NSCEMEY---FLTALNSGAPPH 447

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            GIA+G DRL+ +   A +I +VI  P
Sbjct: 448 GGIALGLDRLIAIFVNAKSIRDVIAFP 474



 Score = 60.4 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 38/128 (29%), Gaps = 8/128 (6%)

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
               R F               L  SP+   + L+ +G  K    A  +R+       QP
Sbjct: 116 ANGAREFVVPTKFP---GLWYCLPQSPQQFKQLLMISGFSKYMQVARCFRDETSRSDRQP 172

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EFT L+   A  +   + +   N++                      +    +   +A +
Sbjct: 173 EFTQLDIEMAFITPYDIYEIIENMLLYIWPTVQST-----LGCQPISTPFLRMQYCDAMS 227

Query: 176 RYANIDLG 183
           RY +    
Sbjct: 228 RYGSDKPD 235


>gi|312113634|ref|YP_004011230.1| aspartyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218763|gb|ADP70131.1| aspartyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 637

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 70/211 (33%), Gaps = 30/211 (14%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   R      RR  L    ++R  I + +R+  V+  F E  +  L 
Sbjct: 152 PLPVFGEPEYPEDVRLRYRFLDLRRETLHRNIIQRTKIIADMRKRMVDAGFTEFSTPILT 211

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 212 ASSPEG---ARDFLVPSRIH---PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 265

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E +      +IR   +                      
Sbjct: 266 PRADRLPGEFYQLDLEMSFVTQEDVWDTMEPVIRAVFDGFAGGKPVTDV--------FPR 317

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           I   +A  +Y   D     +  +  D    +
Sbjct: 318 IAYDDAITKY-GTDKPDLRNPIEMQDVSEHF 347



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 49/166 (29%), Gaps = 17/166 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +        + I      E  E    ++        P            
Sbjct: 454 EARTRVGEELNLVDRDRFELAWIVDFPFYEWNEDEKKVDFAHNPFSMPQGGLEALETRDP 513

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                 +++L     E+ +       P      FE       +++E+             
Sbjct: 514 LELKAYQYDLVCNGFEIASGSIRNQSPETMVTAFEKVGLTKADVEERFGG---------- 563

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                    P   G+A G DR+VML+TGA N+ E+   P +Q  ++
Sbjct: 564 LYRAFQFGAPPHGGMAFGIDRIVMLITGAKNLREISLFPMNQQAED 609


>gi|294630423|ref|ZP_06708983.1| aspartyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292833756|gb|EFF92105.1| aspartyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 587

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 55/163 (33%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG        +  I    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRAGQFEQDVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLQALETQDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    +EL +      +P      FE         Y+    ++ +F   L 
Sbjct: 465 LDILAWQYDIVCNGVELSSGAIRNHEPDIMLKAFEI------AGYD-AETVEREFAGMLR 517

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 518 AFRFGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R  + S++R   V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRTAVISAIRHKMVALGFNEMATPILTATSPEG---ARDFVVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            +   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
                   +    E    ++F       +  S    I   EA  +Y +   DL   L+  
Sbjct: 245 ----EQEDVFRPIEQLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAKLELV 300

Query: 190 DQPDRHLLYLQAQQAGIRV 208
           D  D          AG  V
Sbjct: 301 DITDVFEGSEFKAFAGKHV 319


>gi|255030116|ref|ZP_05302067.1| aspartyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 321

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 44/155 (28%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    +  +  +    L E  E              P  E        +
Sbjct: 132 ALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAERYVSAHHPFTLPKEEDIPLLETDS 191

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 192 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDA 245

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 246 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 280


>gi|271967379|ref|YP_003341575.1| aspartyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
 gi|270510554|gb|ACZ88832.1| aspartyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
          Length = 578

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 58/170 (34%), Gaps = 8/170 (4%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D            R LL     + G R    D  +  F  I+   +    G    T +  
Sbjct: 379 DAIFFAAGTAAASRDLLGAARLEIGRRCGLIDESAWNFLWIVDAPMFEEDGEGGWTAVHH 438

Query: 241 -YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
            +  P+   A+ +   P       +++    +E+      +     Q+  F+     K+ 
Sbjct: 439 PFTGPKPEWADNFQDHPGEALAYAYDMVCNGMEIGGGSIRIHRAEMQQRVFDVLGISKE- 497

Query: 298 IYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              E        L       P   GIA G+DR+ ML+ G ++I +VI  P
Sbjct: 498 ---EAENKFGFLLEAFKYGPPPHGGIAYGWDRICMLLAGGDSIRDVIAFP 544



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 72/212 (33%), Gaps = 30/212 (14%)

Query: 3   QIPSQPWWN----RDFHYRRRPFLLKRNMIQSSLR----------EYFVENQFIEIDSMS 48
            +P     N     +   + R   ++R  + +++R          E   E+ F  I++ +
Sbjct: 103 PLPFPIEGNAGVSEEARLKYRYLDIRRQQVANAMRIRSKATYLAHEVMNEHGFNYIETPT 162

Query: 49  LQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           L   +P      R F   + +Q        L  SP+   + L+ AG E+ +  A  +R+ 
Sbjct: 163 LTRSTPEGA---RDFLVPVRLQ--PGSWYALPQSPQLFKQLLMVAGMERYYQLARCFRDE 217

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT ++   +            ++I     +  +             +    
Sbjct: 218 DLRADRQPEFTQIDVEMSFVD-------QDDVIALGEALVGRIWKETIGYELP--TPLPR 268

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +T  +A +RY   D        +  +    + 
Sbjct: 269 MTYWDAMSRY-GSDKPDLRFGQELVEMTEYFA 299


>gi|182437583|ref|YP_001825302.1| aspartyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|238688986|sp|B1VQW8|SYD_STRGG RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|178466099|dbj|BAG20619.1| putative aspartyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 599

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG        +  I    + EK E    I+        P    A       
Sbjct: 405 AVRVEAAKRAGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLADLEEKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    IEL +      +P      FE    +++ + +E   +    L    
Sbjct: 465 LDILAWQYDIVCNGIELSSGAIRNHEPELMLKAFEIAGYDRETVEHEFAGM----LRAFR 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 521 LGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 70/226 (30%), Gaps = 25/226 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + +S+R   V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEG---ARDFVVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG-----TT 185
                    +    E    ++F+         S    I   E+  +Y N           
Sbjct: 245 -----EQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLEL 299

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS---DIFSRILIEKIEP 228
           +D  D          A +    +   DT       F  +    +E 
Sbjct: 300 VDISDVFADSGFKAFAGKHVRALPVPDTAGQSRKFFDGLGEYAVEH 345


>gi|326778237|ref|ZP_08237502.1| aspartyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326658570|gb|EGE43416.1| aspartyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 595

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG        +  I    + EK E    I+        P    A       
Sbjct: 405 AVRVEAAKRAGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLADLEEKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    IEL +      +P      FE    +++ + +E   +    L    
Sbjct: 465 LDILAWQYDIVCNGIELSSGAIRNHEPELMLKAFEIAGYDRETVEHEFAGM----LRAFR 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 521 LGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 70/226 (30%), Gaps = 25/226 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + +S+R   V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEG---ARDFVVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG-----TT 185
                    +    E    ++F+         S    I   E+  +Y N           
Sbjct: 245 -----EQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLEL 299

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS---DIFSRILIEKIEP 228
           +D  D          A +    +   DT       F  +    +E 
Sbjct: 300 VDISDVFADSGFKAFAGKHVRALPVPDTAGQSRKFFDGLGEYAVEH 345


>gi|38567122|emb|CAE76417.1| related to aspartate--tRNA ligase, mitochondrial (fragment)
           [Neurospora crassa]
          Length = 683

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 12/135 (8%)

Query: 226 IEPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           I+P  G         +P                        ++L    +EL      +  
Sbjct: 522 IDPGQGGQAGFKATHHPFTAPLTEADVEMLATDPLKARADHYDLVVNGVELGGGSRRIHL 581

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
              Q +     ++                L  L    P  +G A+GFDRLV ++T  +++
Sbjct: 582 SSMQEYVMRNILKMTDAGL--AQF--SHLLEALRAGCPPHAGFALGFDRLVAILTHTDSV 637

Query: 340 NEVIWTPFSQSNQEE 354
            +VI  P  +S + E
Sbjct: 638 RDVIAFP--KSMKGE 650



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 7/155 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  LL R  I   LR+   +  F E+++  L + +P      R F      +        
Sbjct: 170 RSRLLARPQIGFQLRKTLNDLDFTEVETPILFKSTPEG---AREFLVPTRRR---GLAYA 223

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+++G    + FA  +R+ +     QPEFT L+      + E +M+   
Sbjct: 224 LPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQPEFTQLDLEMGFATGEDVMRTVE 283

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
            ++       N +    +  +         +   E
Sbjct: 284 TLVTQLLPALNAQFNVIRQGDDIYPVPKRDLNNGE 318


>gi|50289245|ref|XP_447053.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526362|emb|CAG59986.1| unnamed protein product [Candida glabrata]
          Length = 659

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 10/120 (8%)

Query: 232 INCCTILDRYPAPESALANIYP--ADPRFT--KRFELYACNIELCNACDELLDPIEQRHR 287
            +   I   +P     L +      +P     + ++L    IEL      + DP  Q+  
Sbjct: 511 EDRTVISTHHPFTMVQLQDYDKLTTNPIDCLGQHYDLVMNGIELGGGSTRIHDPELQKFM 570

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           FE     K   Y     +    L+      P  +G A+G+DR+  ++ G ++I +VI  P
Sbjct: 571 FE--NVLKISNY---QILFGHLLSAFETGTPPHAGFAIGYDRMCAMLCGTDSIRDVIPFP 625



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 86/216 (39%), Gaps = 25/216 (11%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  + +    R + +L  R  +  +LR+   ++ F EI++ +L + +P      R F 
Sbjct: 147 PPEFRYIQLRTARYQNYLRTRYEVSKTLRQILDQDGFTEIETPTLFKATPEG---AREFM 203

Query: 64  TELIIQDHIRK-----PLY--LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
               +   I++     P++  L  SP+   + L+A+G  K F FA  +R+ +     QPE
Sbjct: 204 VPTRVSAKIKQVDKIVPMFYALTQSPQQYKQLLMASGVPKYFQFARCYRDEDLRADRQPE 263

Query: 117 FTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS-------FQNVNCNPFSEPEYIT 169
           FT L+   +  S + +M      I    +    K  +         ++     S    +T
Sbjct: 264 FTQLDMEMSFASQKDVMSVIEKCITSVWKKFRTKESTGLLTLDRNHSLTPTDASNLYRMT 323

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
             EA   Y        +D PD     L  L  ++ G
Sbjct: 324 YKEAMTNYG-------IDKPDLRAPSLRILNMKELG 352


>gi|269795068|ref|YP_003314523.1| aspartyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269097253|gb|ACZ21689.1| aspartyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 590

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 7/111 (6%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
             + +P     + +  +P       +++     E+      +     Q   F        
Sbjct: 449 HAFTSPTPEWIDTFEENPGEALAYAYDIVCNGNEIGGGSIRIHRRDVQERVF----AIMG 504

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               E        L       P   GIA G+DR++ L+TG+++I +VI  P
Sbjct: 505 IGEEEAQEKFGFLLDAFAFGAPPHGGIAFGWDRILTLLTGSDSIRDVIAFP 555



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 17/159 (10%)

Query: 36  FVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
               +F+EI++ +L   +P      R F     +         L  SP+   + L+ AG 
Sbjct: 154 LDAQEFVEIETPTLTRSTPEG---ARDFLVPARL--APGSWYALPQSPQLFKQLLMVAGM 208

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
           E+ +  A  +R+ +     QPEFT L+   +    + ++     ++    ++    I + 
Sbjct: 209 ERYYQIARCYRDEDFRADRQPEFTQLDVEMSFVEQDDVIALGEQLLVALWDLIGVTIPT- 267

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
                        +T  +A  RY   D        +  +
Sbjct: 268 ---------PIPRMTFKDAMERY-GSDKPDLRFGLELTE 296


>gi|159040656|ref|YP_001539908.1| asparagine synthetase A [Caldivirga maquilingensis IC-167]
 gi|157919491|gb|ABW00918.1| tRNA synthetase class II (D K and N) [Caldivirga maquilingensis
           IC-167]
          Length = 348

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/352 (11%), Positives = 91/352 (25%), Gaps = 56/352 (15%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAFSTE 65
              W R+  Y        +  I  ++REY     F E+    +           +  + +
Sbjct: 32  SWKWARESKYV--TVFKIQASILHAIREYLDSQGFTEVLPPIIGPVTDPGIRGAKQATVD 89

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC----LHQPEFTMLE 121
               +      Y   S     K+ +AA   K++  +   R           H  EF  ++
Sbjct: 90  FYGHE------YKVMSSAILYKQYMAAVLGKVYFVSPNIRFEPNDSVFTGRHLVEFFQVD 143

Query: 122 WYRAHESYEQLMKDCMNII----RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
               + + +  M     +     R   +V  + +        +  +     T AE     
Sbjct: 144 LEILNGTLDDAMNVAEGLFMYVTRYIRDVHGKDLEKMGRELPHYKTPFTRYTHAE----- 198

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
                                    + G     +         +   +   +   +    
Sbjct: 199 -------------------AVELVNKLGCSNPRNT------EILWECEKVLSAHHDSPLF 233

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR-HRFEKEMQEKK 296
           +  YP    +       DP        +   +       E +   E+     +   + ++
Sbjct: 234 IYEYPK--GSRGFYNREDPGKPGYLRDFD--MLYPEGFGEAISGGEREYEPVKVISRIRE 289

Query: 297 KIYNETYPIDEDFLACLTEMPQ--SSGIAMGFDRLVMLVTGANNINEVIWTP 346
              +        FL  L +     ++G  +G +R    + G   + E    P
Sbjct: 290 AGEDPNKY--RWFLEMLKDFYPLKTAGFGIGVERFTRYICGLRAVWEARPYP 339


>gi|97196714|sp|Q2W3D5|SYD_MAGMM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|82946776|dbj|BAE51640.1| Aspartyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 876

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 57/173 (32%), Gaps = 16/173 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                   ++ R+ + + LR+  +   F E  +  L   SP     ++            
Sbjct: 412 RREDVHANMMLRSRVIAYLRQAMIGQGFTEFQTPILTASSPEGARDYLVPSRIHPGKFYA 471

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ AG +K F  A  +R+        P EF  L++  ++ +  
Sbjct: 472 LPQ------APQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQLDFEMSYVT-- 523

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
                  ++      V       F        +    IT A++  +Y +    
Sbjct: 524 -----QDDVFAAIEPVLEGVFKEFGKGRAVTPAPFPRITYADSMLKYGSDKPD 571



 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 45/140 (32%), Gaps = 11/140 (7%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
               + E  E    +         P                  ++++    +EL +    
Sbjct: 711 VDFPMYEINEETGLVEFSHNPFSMPQGGMDALLNQDPLTINAYQYDIVCNGVELSSGAIR 770

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLV 333
              P      FE         Y+  + ++E F   L       P   G A G DR+VML+
Sbjct: 771 NHRPDIMYKAFEI------AGYSAAH-VEEHFGGMLNAFKFGAPPHGGSAPGVDRIVMLL 823

Query: 334 TGANNINEVIWTPFSQSNQE 353
               NI E+I  P +Q  Q+
Sbjct: 824 ADQPNIREIILFPMNQQAQD 843


>gi|315282430|ref|ZP_07870847.1| aspartyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613935|gb|EFR87662.1| aspartyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 331

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 44/155 (28%), Gaps = 9/155 (5%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     +   +    +  +  +    L E  E              P  E        +
Sbjct: 149 ALRNKLGKDLNLINEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDS 208

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLAC 312
                + +++     E+      +     Q   F      +                +  
Sbjct: 209 SKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMEA 262

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 263 LEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 297


>gi|46202533|ref|ZP_00208554.1| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 501

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 60/184 (32%), Gaps = 26/184 (14%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           D   R R            ++ R+ + + LR+  +   F E  +  L   SP     ++ 
Sbjct: 26  DMRLRYRFLDLRREEVHANMMLRSRVIAYLRQAMIGQGFTEFQTPILTASSPEGARDYLV 85

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTM 119
                      + +      +P+   + L+ AG +K F  A  +R+        P EF  
Sbjct: 86  PSRIHPGKFYALPQ------APQQFKQLLMVAGFDKYFQIAPCFRDEAGRADRSPGEFYQ 139

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN 179
           L++  ++ +         ++      V       F        +    IT A+A  +Y +
Sbjct: 140 LDFEMSYVT-------QDDVFAAIEPVLEGVFKEFGKGRAVTPAPFPRITYADAMLKYGS 192

Query: 180 IDLG 183
               
Sbjct: 193 DKPD 196



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 61/198 (30%), Gaps = 15/198 (7%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA----HDDTWSDIFS 219
           EP  +   +A A   + D      + + P      L   + G  +         +     
Sbjct: 278 EPARVEAIKAAANLKDGDAVFFACDKELPAAKFAGLVRTKIGNELDLLEKDVFKFCWTVD 337

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
             + E  E    +         P                  ++++    +EL +      
Sbjct: 338 FPMYEINEETGLVEFSHNPFSMPQGGMDALLNQDPLTINAYQYDIVCNGVELSSGAIRNH 397

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLVTG 335
            P      FE         Y+  + ++E F   L       P   G A G DR+VML+  
Sbjct: 398 RPDIMYKAFEI------AGYSAAH-VEEHFGGMLNAFKFGAPPHGGSAPGVDRIVMLLAD 450

Query: 336 ANNINEVIWTPFSQSNQE 353
             NI E+I  P +Q  Q+
Sbjct: 451 QPNIREIILFPMNQQAQD 468


>gi|327310194|ref|YP_004337091.1| asparagine synthetase A [Thermoproteus uzoniensis 768-20]
 gi|326946673|gb|AEA11779.1| asparagine synthetase A [Thermoproteus uzoniensis 768-20]
          Length = 348

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 86/335 (25%), Gaps = 48/335 (14%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
               +     ++RE+     F+E+ S      P  +  IR    +    D       + +
Sbjct: 44  VFKVQASALRAIREFLDSKGFVEVLSPI--VGPVTDPGIR--GAKQATIDFYGAEYKVMS 99

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC----LHQPEFTMLEWYRAHESYEQLMKDC 136
           S     K+ +AA   KI+  +   R           H  EF  ++      SY   M   
Sbjct: 100 SAILY-KQYMAASLGKIYFVSPNIRLEPNDSIYTGRHLVEFYQVDIEMYKASYMDAMDVA 158

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             ++    +                  E +                              
Sbjct: 159 EELVTYVVKYIKDVHGKELEALGRQLREFQRPFKRYQHRE-------------------- 198

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                 + G R    +       +++          +    +  YP    A       DP
Sbjct: 199 AVEFVNKLGCRNPPKEELMWECEKVMSAH------HDSPFFVYDYPR--GARGFYDREDP 250

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQR---HRFEKEMQEKKKIYNETYPIDEDFLACL 313
                   +   +       E +   E+     R     + ++   +      + FL   
Sbjct: 251 ERRGILRDFD--MLYPEGFGEAISGAEREYEPERLV--ARIRESGEDPAKY--QWFLQMA 304

Query: 314 TEMPQ--SSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E+    ++G  +G +RL   + G   + E    P
Sbjct: 305 KELYPLQTAGFGIGVERLTRYLCGLRAVWEARPYP 339


>gi|297566455|ref|YP_003685427.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850904|gb|ADH63919.1| aspartyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 580

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 60/179 (33%), Gaps = 16/179 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
           L  R+ + +++  +  +  F  +++  L   +P      R F     +         L  
Sbjct: 146 LRLRHRVIAAIYRFLDQAGFTSVETPYLTRSTPEG---ARDFLVPSRL--APGHFYALPQ 200

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SP+   + L+ AG ++ F  A  +R+ +     QP+FT L+   +    E ++     + 
Sbjct: 201 SPQLFKQMLMVAGYDRYFQIARCFRDEDLRADRQPDFTQLDMEMSFVEQEDILAINEQLA 260

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
               + A                    +T  +A   Y   D        +  +   L+ 
Sbjct: 261 AYVVKEALG---------IELPLPFPRLTYQQAMDTY-GSDKPDLRFGLELQEVTALFA 309



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 40/143 (27%), Gaps = 5/143 (3%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           +     +  +    L+E  E +            P  +                ++L   
Sbjct: 413 IGPGYRFLWVVDFPLLEWDEESGRWTYMHHPFTSPNLDDLPLLESDPGKVRAYAYDLVFN 472

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
            +E+      +     Q   F            E        L  L    P   GIA G 
Sbjct: 473 GLEVGGGSIRIHRRDLQERMFALLGISLA----EAQEKFGFLLEALSYGAPPHGGIAWGL 528

Query: 327 DRLVMLVTGANNINEVIWTPFSQ 349
           DR +  + G  +I EVI  P ++
Sbjct: 529 DRFIATLAGEESIREVIAFPKNK 551


>gi|255562232|ref|XP_002522124.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223538723|gb|EEF40324.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 206

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 42/135 (31%), Gaps = 15/135 (11%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
                   +              +P       ++          +++    +E+      
Sbjct: 53  ILWETDFLMFEWNDTEQRLEALHHPFTAPNPEDMEDLSSARALAYDMVYNGVEIGGGSLR 112

Query: 278 LLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVM 331
           +     Q+   E      ++ +EK     E   +           P   GIA G DRLVM
Sbjct: 113 IYKREIQQKVLEIVGISAEQAEEKFGYLLEALDM---------GAPPHGGIAYGLDRLVM 163

Query: 332 LVTGANNINEVIWTP 346
           L+  AN+I +VI  P
Sbjct: 164 LLADANSIRDVIAFP 178


>gi|310287208|ref|YP_003938466.1| Aspartyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309251144|gb|ADO52892.1| Aspartyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 598

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    E  F E+++ + ++ +P      R F     +    
Sbjct: 139 RRPSMQHNLKLRSDMAKAARHALEEMDFTEVETPTFIKSTPEG---ARDFVVPARLV--P 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A    E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAFVDQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    + A            +     + IT  +A  +Y +        NP   
Sbjct: 254 MAMAEKVIAAIWKSAG----------YDVQLPIQRITWQDAMDKYGSDKPDLRFGNPLVE 303

Query: 193 DRHLLYL 199
                  
Sbjct: 304 LTEYFKD 310



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 17/120 (14%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF--- 288
                +P         + +  DP       +++     E+      +     Q       
Sbjct: 453 WTSMHHPFTMPSKDWIDKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDGIQDRVLNVL 512

Query: 289 -EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                + K+K            L       P  +GIA+G+DR V ++ GA+ I +VI  P
Sbjct: 513 GIAPEEAKEKFG--------FLLDAFKFGAPPHAGIALGWDRTVSILAGADTIRDVIAFP 564


>gi|281358726|ref|ZP_06245203.1| aspartyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281314852|gb|EFA98888.1| aspartyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 599

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 62/191 (32%), Gaps = 22/191 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RR  L    + R+ + + +R Y   N F E  +  L   SP     ++            
Sbjct: 134 RRDELHRNIMLRSQVIAEMRRYMTTNGFNEFQTPILTASSPEGARDYLVPSRLHPGKFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ AG ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 194 LPQ------APQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                  + I    E   + +F   +      +    I   EA  R+   D     +  +
Sbjct: 245 -----EQDDIFAVIEGLLEDVFGKFSTKEFTHAPFPRIPYREAMRRF-GSDKPDLRNPLE 298

Query: 191 QPDRHLLYLQA 201
             D    +   
Sbjct: 299 MIDVSEQFRDC 309



 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            ++    +Q  +   +   +  I    + E+ E              P            
Sbjct: 409 AVIPELGRQLELIDPNVFKFCWIVDFPMFEEDEETGATVFSHNPFSMPQGGMDALLNKNP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    IEL +       P      FE         Y+    +D+ F   + 
Sbjct: 469 LDILAYQYDIVCNGIELSSGAIRNHQPEVMYKAFEI------AGYD-RSVVDDKFGGMIN 521

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR+VML+    NI EVI  PF+Q  Q+
Sbjct: 522 AFKLGAPPHGGIAPGVDRMVMLLADEPNIREVIAFPFNQQAQD 564


>gi|301763160|ref|XP_002917005.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Ailuropoda
           melanoleuca]
          Length = 653

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L      +   +  ++L     E+      + D   QR+     ++       
Sbjct: 507 HPSDIQLLYT--EPEKVRSLHYDLVLNGSEIGGGSIRIHDAELQRYILATLLK------- 557

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ LVTGA +I +VI  P
Sbjct: 558 EDVKLLSHLLQALDFGAPPHGGIALGLDRLICLVTGAPSIRDVIAFP 604



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 186 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGA---KEFVIPSREPGKF---YCLP 239

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      + +    +
Sbjct: 240 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQRLIEGL 299

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T AEA A Y   D   T       D
Sbjct: 300 LQY----------SWPNDKDPLVVPFPSLTFAEALASY-GTDKPDTRFGMKIID 342


>gi|302559582|ref|ZP_07311924.1| aspartyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302477200|gb|EFL40293.1| aspartyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 587

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 55/163 (33%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG    +   +  I    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRAGHFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALETQDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    +EL +      +P      FE           E   ++E F   L 
Sbjct: 465 LDILGWQYDIVCNGVELSSGAIRNHEPEIMLKAFEI-------AGYERETVEEKFAGMLR 517

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 518 AFRFGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 65/199 (32%), Gaps = 17/199 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    +L R  + S++R       F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNILLRTSVISAMRHKMTAMGFNEMATPILSATSPEG---ARDFVVPSRLN--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            +   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
                   +    E    ++F       +  S    +   EA  +Y +   DL   L+  
Sbjct: 245 ----EQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRVPFREAMLKYGSDKPDLRAQLELV 300

Query: 190 DQPDRHLLYLQAQQAGIRV 208
           D  D          AG  V
Sbjct: 301 DITDVFEGSEFKAFAGKHV 319


>gi|291295943|ref|YP_003507341.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290470902|gb|ADD28321.1| aspartyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 580

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 42/141 (29%), Gaps = 9/141 (6%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIY--PADPRF--TKRFELYACNIELCN 273
           F  ++   +              +P     L +++    DP       ++      E+  
Sbjct: 419 FLWVVDFPLLEWDEEAGRWTYMHHPFTSPNLEDLHLLDTDPGRVRAYAYDFVLNGSEIGG 478

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVML 332
               +     Q   F            E        L  L    P   GIA G DR V  
Sbjct: 479 GSIRIHRRDLQERMF----ALLGIGPEEAQQKFGFLLEALSYGAPPHGGIAWGLDRFVAH 534

Query: 333 VTGANNINEVIWTPFSQSNQE 353
           + G  +I EVI  P ++  +E
Sbjct: 535 LAGEESIREVIAFPKNKEGKE 555



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 71/207 (34%), Gaps = 19/207 (9%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEF 84
            + +++  +   + FI +++  L   +P      +     E      + +      SP+ 
Sbjct: 151 KVVAAIYRFLDAHGFISVETPYLTRSTPEGARDFLVPSRLEPGHFYALPQ------SPQL 204

Query: 85  SCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
             + L+ AG ++ F  A  +R+ +     QP+FT L+   +  + E ++     +     
Sbjct: 205 FKQMLMVAGYDRYFQIARCFRDEDLRADRQPDFTQLDMEMSFVTQEDIIALNEELAAFIL 264

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNPDQPDRHLLYLQAQ 202
                +          P      +T  E   RY +   DL   L+  D  +         
Sbjct: 265 RETLGQ---------EPPLPFPRLTYTEVMNRYGSDKPDLRFGLELQDVTEAFRGGEFRA 315

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPN 229
            AG  V        + SR  IE +E  
Sbjct: 316 FAGAEVVKALVVPGLLSRREIEALEAT 342


>gi|332219612|ref|XP_003258946.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Nomascus
           leucogenys]
          Length = 645

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L          ++ ++L     E+      + +   Q +     ++       
Sbjct: 508 HPSDIHLLYT--EPKKARSQHYDLVLNGNEIGGGSIRIHNAELQHYILATLLK------- 558

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ LVTG+ +I +VI  P
Sbjct: 559 EDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFP 605



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 63/184 (34%), Gaps = 10/184 (5%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 187 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGKF---YSLP 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           ++ A    N K           F+E       +       I +    D     +   L  
Sbjct: 301 LQYAWP--NDKDPVVIPFPTMTFAEALATYGTDKPDTRFGIKIIDISDMFRNTEIGFLQD 358

Query: 200 QAQQ 203
              +
Sbjct: 359 ALSK 362


>gi|311064068|ref|YP_003970793.1| aspartyl-tRNA synthetase AspS [Bifidobacterium bifidum PRL2010]
 gi|310866387|gb|ADP35756.1| AspS Aspartyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 598

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    E  F E+++ + ++ +P      R F     +    
Sbjct: 139 RRPSMQHNLKLRSDMAKAARHALEEMDFTEVETPTFIKSTPEGA---RDFVVPARLV--P 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A    E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAFVDQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    + A            +     + IT  +A  +Y +        NP   
Sbjct: 254 MAMAEKVIAAIWKSAG----------YDVQLPIQRITWQDAMDKYGSDKPDLRFGNPLVE 303

Query: 193 DRHLLYL 199
                  
Sbjct: 304 LTEYFKD 310



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 17/120 (14%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF--- 288
                +P         + +  DP       +++     E+      +     Q       
Sbjct: 453 WTSMHHPFTMPSKDWIDKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQDRVLNVL 512

Query: 289 -EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                + K+K            L       P  +GIA+G+DR V ++ GA+ I +VI  P
Sbjct: 513 GIAPEEAKEKFG--------FLLDAFKFGAPPHAGIALGWDRTVSILAGADTIRDVIAFP 564


>gi|255584663|ref|XP_002533054.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223527152|gb|EEF29324.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 657

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 87/283 (30%), Gaps = 21/283 (7%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRA 125
           + +D   +P YL  S     +    A    ++ F   +R +      H PE  M+E   A
Sbjct: 387 VPEDFFSQPTYLTVSGRLHLESYACA-LGNVYSFGPRFRADRRVFAKHVPEMWMVEAEMA 445

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               E  M    + ++          F  + V  N   + +++T      R   ++   +
Sbjct: 446 FSDLEGAMNCAEDYLK----------FLCKWVLENCSEDMKFVTKRIDKGRINLLETILS 495

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                   +  L +  Q    +V     W    +   +  +      +   I+  +P   
Sbjct: 496 CSYQRITYKEALDVLKQAVDKKVETQPEWGTALTAQQLSYLADEFYKSPV-IIYNHPKEV 554

Query: 246 SALANIYPADPRFTKRFELY-ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                    D +    F++       L               R  +    K++     + 
Sbjct: 555 KPFYTRLNDDGKTVAAFDMVVPKGGTLITGSQNEERINVLNERINELGLPKEQ---YEWC 611

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +D           + SG + GFD +V+  TG  ++ + I  P 
Sbjct: 612 LDLR----GHGTVEHSGFSFGFDLMVLFATGIPDVRDAIPFPR 650



 Score = 46.2 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 7/59 (11%), Positives = 20/59 (33%), Gaps = 6/59 (10%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELII 68
           H+R R       +  R+ +  +   +F ++ F+ +    +  +         F    + 
Sbjct: 247 HFRPRTTTVASVMRIRSALTFATYTFFQDHGFLSVHVPIITTTD-GAGFSEKFRVTTLS 304


>gi|103487236|ref|YP_616797.1| aspartyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98977313|gb|ABF53464.1| aspartyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 619

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 15/173 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R    ++ R+ + +SLR   VE  F E  +  L   SP     ++            
Sbjct: 160 RRERLHANIMLRSNVIASLRRRMVEQGFTEYQTPILTASSPEGARDYLVPSRVHPGKFYA 219

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+ AG ++ F  A  +R+ +      P EF  L++  +  + +
Sbjct: 220 LPQ------APQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFEMSFVTQD 273

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +      ++    E            +  P      I   E+  +Y N    
Sbjct: 274 DVFNAIEPVLAGVFEEF------ANGKSVTPAGSFPRIPYRESMLKYGNDKPD 320



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 55/157 (35%), Gaps = 11/157 (7%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A+Q G+   +      I    + E+ E    I+        P  E               
Sbjct: 443 AEQLGLIDPNRFEMCWIVDFPMFERDEETGKIDFSHNPFSMPQGELEALETKDPLDILAW 502

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEM 316
           ++++    +EL +       P      FE         Y++   +D +F   +       
Sbjct: 503 QYDIVCNGVELSSGAIRNHRPDIMYKAFEI------AGYSQA-EVDANFAGMINAFKYGA 555

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G A G DR+VML+    NI EV+  P +Q  ++
Sbjct: 556 PPHGGSAPGVDRIVMLLADEPNIREVVVFPMNQKAED 592


>gi|238650679|ref|YP_002916532.1| aspartyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|238624777|gb|ACR47483.1| aspartyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 615

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 67/203 (33%), Gaps = 9/203 (4%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ I S +R     + F E  +  L   SP      R F   
Sbjct: 138 KHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEG---ARDFLVP 194

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+  
Sbjct: 195 SRMH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 251

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E +      ++         K  S     C P++E      ++       I + 
Sbjct: 252 MSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIIIA 311

Query: 184 TTLDNPDQPDRHLLYLQAQQAGI 206
              +     D  +     ++  I
Sbjct: 312 DVTEIFRDSDFTIFRENIKKGSI 334



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA----PESALANIYPADPR 257
           ++  +       +  I      E  E    I+        P                   
Sbjct: 428 EELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELLEL 487

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT 314
              ++++    IEL +       P      F          Y+E   +D+ F   +    
Sbjct: 488 TAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSI------AGYSEE-EVDKRFGGMIRAFK 540

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 541 FGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 580


>gi|134058591|emb|CAK44627.1| unnamed protein product [Aspergillus niger]
          Length = 690

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 12/127 (9%)

Query: 227 EPNLGINCCTILDRYPAPESALAN-----IYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P      ++                ++L    +EL      +   
Sbjct: 525 EPGQGGTAGLSATHHPFTAPKTSSDVDLLSKDPTKALADHYDLVVNGVELGGGSRRIHCA 584

Query: 282 IEQRHRFEKEMQE-KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
           + Q + F++ ++  K++I    +      L  L    P  +G A+GFDRL+ ++ G  ++
Sbjct: 585 LTQNYIFKEILKMPKERIDEFQH-----LLNALWAGCPPHAGFALGFDRLITVMLGKESV 639

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 640 RDVIAFP 646



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 73/201 (36%), Gaps = 18/201 (8%)

Query: 2   HQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETH 58
           H    +    R      R  L  R   ++  RE   + +  F+EI++  L + +P     
Sbjct: 192 HPPKHRHLQLRSDKE-LRDALRFRAQARNVCRETLEQLKPAFVEIETPLLFKSTPEG--- 247

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
            R F      +    K   L  SP+   + L+A+G  + F FA  +R+ +     QPEFT
Sbjct: 248 AREFIVPTRKR---GKAYALPQSPQQYKQILMASGIPRYFQFARCFRDEDLRADRQPEFT 304

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   A  + + +M     IIR         ++        P      +T  EA  RY 
Sbjct: 305 QLDLEMAFAAGQDVMAVVEEIIRG--------LWGNMMREPVPSGPFRRMTYQEAMTRYG 356

Query: 179 NIDLGTTLDNPDQPDRHLLYL 199
           +    T          HLL  
Sbjct: 357 SDKPDTRHGMEIHRVEHLLPA 377


>gi|296114975|ref|ZP_06833620.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978493|gb|EFG85226.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 641

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 56/173 (32%), Gaps = 16/173 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R  + +SLR    +  F+E  +  L   SP      R F     +    
Sbjct: 170 RREKVHRNIMLRAQVIASLRRRMTDLGFVEFQTPILTASSPEG---ARDFLVPARMH--- 223

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   +  + AG ++ F  A  +R+        P EF  L++  A  + E
Sbjct: 224 PGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFEMAFATQE 283

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +      ++              +       +  E I  A A   Y +    
Sbjct: 284 DVFATLEPVMEGVFREFGGGRIVSK-------APFERIPYATAMEVYGSDKPD 329



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 52/158 (32%), Gaps = 11/158 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A +  +   +   +  I    + E+ E    I+        P                 
Sbjct: 451 IATELDLIEENAFRFCWITDFPMFERNEDTGQIDFSHNPFSMPQGGMEALEKQDPLTIKA 510

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TE 315
            ++++    IEL +       P      FE         Y E+  ++  F   L      
Sbjct: 511 YQYDIVCNGIELSSGAIRNHRPDVMIRAFEI------AGYPES-EVEARFGGMLNAFRYG 563

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 564 APPHGGSAPGVDRIVMLLADEPNIREVILFPLNQQGED 601


>gi|23464646|ref|NP_695249.1| aspartyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|46577273|sp|Q8G863|SYD_BIFLO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|23325204|gb|AAN23885.1| aspartyl-tRNA synthetase [Bifidobacterium longum NCC2705]
          Length = 599

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    +  F E+++ + ++ +P      R F     +    
Sbjct: 139 RRPSMQYNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG---ARDFVVPARLV--P 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A+   E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAYVDQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    + A  +                 IT  +A  +Y +        NP   
Sbjct: 254 MAMTEKVIAAIWKSAGYE----------VQLPLPRITWKDAMDKYGSDKPDLRFGNPLVE 303

Query: 193 DRHLLYL 199
                  
Sbjct: 304 LTEYFKN 310



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P         + +  DP       +++     E+      +     Q    +  
Sbjct: 453 WTSMHHPFTMPSKDWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVL 512

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              K+    E        L       P  +G+A+G+DR V ++ GA++I +VI  P
Sbjct: 513 GITKE----EADEKFGFLLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFP 564


>gi|254780419|ref|YP_003064832.1| aspartyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040096|gb|ACT56892.1| aspartyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 622

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 49/158 (31%), Gaps = 17/158 (10%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            AQ+ GI   +   +  I      E  E    I+        P                 
Sbjct: 420 IAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGMESLKGNDLLSIKA 479

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL 313
            +++L     E+ +              F      ++ ++ +                  
Sbjct: 480 FQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGG----------LYRAF 529

Query: 314 T-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
              MP   GIA G DR+VML+ GA N+ EV   P SQ+
Sbjct: 530 QCGMPPHGGIAAGIDRIVMLLLGAKNVREVSLFPMSQN 567



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 65/206 (31%), Gaps = 14/206 (6%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RR  L    +KR  I +S+R   +   FIE  +  L   SP      +            
Sbjct: 134 RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+A+G ++ F  A  +R+ +      P EF  L+   +    +
Sbjct: 194 LPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQLDMEMSFVEQD 247

Query: 131 QLMKDCMNIIRCAAEVA-NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
            ++    N++R   E   N    S   +              +   R   I    T    
Sbjct: 248 DILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFV 307

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWS 215
               R    + +   G  V       
Sbjct: 308 HSEFRVFSKILSVNPGYEVWAIPAKG 333


>gi|224282750|ref|ZP_03646072.1| aspartyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313139908|ref|ZP_07802101.1| aspartyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313132418|gb|EFR50035.1| aspartyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 598

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    E  F E+++ + ++ +P      R F     +    
Sbjct: 139 RRPSMQHNLKLRSDMAKAARHALEEMDFTEVETPTFIKSTPEGA---RDFVVPARLV--P 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A    E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAFVDQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    + A            +     + IT  +A  +Y +        NP   
Sbjct: 254 MAMAEKVIAAIWKSAG----------YDVQLPIQRITWQDAMDKYGSDKPDLRFGNPLVE 303

Query: 193 DRHLLYL 199
                  
Sbjct: 304 LTEYFKD 310



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 17/120 (14%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF--- 288
                +P         + +  DP       +++     E+      +     Q       
Sbjct: 453 WTSMHHPFTMPSKDWIDKFDQDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQDRVLNVL 512

Query: 289 -EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                + K+K            L       P  +GIA+G+DR V ++ GA+ I +VI  P
Sbjct: 513 GIAPEEAKEKFG--------FLLDAFKFGAPPHAGIALGWDRTVSILAGADTIRDVIAFP 564


>gi|157964212|ref|YP_001499036.1| aspartyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157843988|gb|ABV84489.1| Aspartyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 607

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 18/195 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ I S +R     + F E  +  L   SP      R F   
Sbjct: 133 KHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEG---ARDFLVP 189

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+  
Sbjct: 190 SRMH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 246

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  +           +    E     +F+         +    I   E+  +Y   D  
Sbjct: 247 MSFVT--------QEDVFSTLEPVMYDLFTKFTDKKVSETPFICIPYNESMLKY-GSDKP 297

Query: 184 TTLDNPDQPDRHLLY 198
              +     D   ++
Sbjct: 298 DLRNPIIIADVTEIF 312



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA----PESALANIYPADPR 257
           ++  +       +  I      E  E    I+        P                   
Sbjct: 423 EELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELLEL 482

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT 314
              ++++    IEL +       P      F          Y+E   +D+ F   +    
Sbjct: 483 TAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSI------AGYSEE-EVDKRFGGMIRAFK 535

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 536 FGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 575


>gi|164427859|ref|XP_965716.2| hypothetical protein NCU02585 [Neurospora crassa OR74A]
 gi|157071912|gb|EAA36480.2| hypothetical protein NCU02585 [Neurospora crassa OR74A]
          Length = 644

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 12/135 (8%)

Query: 226 IEPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           I+P  G         +P                        ++L    +EL      +  
Sbjct: 483 IDPGQGGQAGFKATHHPFTAPLTEADVEMLATDPLKARADHYDLVVNGVELGGGSRRIHL 542

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
              Q +     ++                L  L    P  +G A+GFDRLV ++T  +++
Sbjct: 543 SSMQEYVMRNILKMTDAGL--AQF--SHLLEALRAGCPPHAGFALGFDRLVAILTHTDSV 598

Query: 340 NEVIWTPFSQSNQEE 354
            +VI  P  +S + E
Sbjct: 599 RDVIAFP--KSMKGE 611



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 7/155 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  LL R  I   LR+   +  F E+++  L + +P      R F      +        
Sbjct: 131 RSRLLARPQIGFQLRKTLNDLDFTEVETPILFKSTPEG---AREFLVPTRRR---GLAYA 184

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+++G    + FA  +R+ +     QPEFT L+      + E +M+   
Sbjct: 185 LPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQPEFTQLDLEMGFATGEDVMRTVE 244

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
            ++       N +    +  +         +   E
Sbjct: 245 TLVTQLLPALNAQFNVIRQGDDIYPVPKRDLNNGE 279


>gi|15892110|ref|NP_359824.1| aspartyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|15619236|gb|AAL02725.1| asparaginyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 615

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 67/203 (33%), Gaps = 9/203 (4%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ I S +R     + F E  +  L   SP      R F   
Sbjct: 141 KHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEG---ARDFLVP 197

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+  
Sbjct: 198 SRMH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 254

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E +      ++         K  S     C P++E      ++       I + 
Sbjct: 255 MSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIIIA 314

Query: 184 TTLDNPDQPDRHLLYLQAQQAGI 206
              +     D  +     ++  I
Sbjct: 315 DVTEIFRDSDFTIFRENIKKGSI 337



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA----PESALANIYPADPR 257
           ++  +       +  I      E  E    I+        P                   
Sbjct: 431 EELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELLEL 490

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT 314
              ++++    IEL +       P      F          Y+E   +D+ F   +    
Sbjct: 491 TAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSI------AGYSEE-EVDKRFGGMIRAFK 543

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 544 FGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 583


>gi|317038560|ref|XP_001401678.2| aspartyl-tRNA synthetase [Aspergillus niger CBS 513.88]
          Length = 676

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 12/127 (9%)

Query: 227 EPNLGINCCTILDRYPAPESALAN-----IYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P      ++                ++L    +EL      +   
Sbjct: 525 EPGQGGTAGLSATHHPFTAPKTSSDVDLLSKDPTKALADHYDLVVNGVELGGGSRRIHCA 584

Query: 282 IEQRHRFEKEMQE-KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
           + Q + F++ ++  K++I    +      L  L    P  +G A+GFDRL+ ++ G  ++
Sbjct: 585 LTQNYIFKEILKMPKERIDEFQH-----LLNALWAGCPPHAGFALGFDRLITVMLGKESV 639

Query: 340 NEVIWTP 346
            +VI  P
Sbjct: 640 RDVIAFP 646



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 73/201 (36%), Gaps = 18/201 (8%)

Query: 2   HQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETH 58
           H    +    R      R  L  R   ++  RE   + +  F+EI++  L + +P     
Sbjct: 192 HPPKHRHLQLRSDKE-LRDALRFRAQARNVCRETLEQLKPAFVEIETPLLFKSTPEGA-- 248

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
            R F      +    K   L  SP+   + L+A+G  + F FA  +R+ +     QPEFT
Sbjct: 249 -REFIVPTRKR---GKAYALPQSPQQYKQILMASGIPRYFQFARCFRDEDLRADRQPEFT 304

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   A  + + +M     IIR         ++        P      +T  EA  RY 
Sbjct: 305 QLDLEMAFAAGQDVMAVVEEIIRG--------LWGNMMREPVPSGPFRRMTYQEAMTRYG 356

Query: 179 NIDLGTTLDNPDQPDRHLLYL 199
           +    T          HLL  
Sbjct: 357 SDKPDTRHGMEIHRVEHLLPA 377


>gi|7437576|pir||S70779 asparagine-tRNA ligase (EC 6.1.1.22) - Xenorhabdus nematophilus
           (fragment)
          Length = 192

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 49/160 (30%), Gaps = 11/160 (6%)

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           Q D        +  G +  +   W    S      +          +   YP    A   
Sbjct: 29  QLDYTDAIKILENCGQKFENPYFWGVDLSSEHERYLAEKHFEAPVIMK-NYPKNIKAFYM 87

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               D +             L     E++   ++  R +   +  +++       D  + 
Sbjct: 88  RMNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDMLDKRLEEMGL--NKEDYWWY 139

Query: 311 ACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             L        +G  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 140 RDLRRYGTVPHAGFGLGFERLVAYVTGVANVRDVIPFPRT 179


>gi|281353847|gb|EFB29431.1| hypothetical protein PANDA_005157 [Ailuropoda melanoleuca]
          Length = 602

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L      +   +  ++L     E+      + D   QR+     ++       
Sbjct: 466 HPSDIQLLYT--EPEKVRSLHYDLVLNGSEIGGGSIRIHDAELQRYILATLLK------- 516

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ LVTGA +I +VI  P
Sbjct: 517 EDVKLLSHLLQALDFGAPPHGGIALGLDRLICLVTGAPSIRDVIAFP 563



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 145 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFVIPSREPGKF---YCLP 198

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      + +    +
Sbjct: 199 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQRLIEGL 258

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T AEA A Y   D   T       D
Sbjct: 259 LQY----------SWPNDKDPLVVPFPSLTFAEALASY-GTDKPDTRFGMKIID 301


>gi|254572794|ref|XP_002493506.1| Mitochondrial aspartyl-tRNA synthetase, required for acylation of
           aspartyl-tRNA [Pichia pastoris GS115]
 gi|238033305|emb|CAY71327.1| Mitochondrial aspartyl-tRNA synthetase, required for acylation of
           aspartyl-tRNA [Pichia pastoris GS115]
 gi|328354669|emb|CCA41066.1| aspartyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 665

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 71/244 (29%), Gaps = 12/244 (4%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  L  R      +R       F EI++  L + +P        F      + +      
Sbjct: 180 QDALKLRAKALQRVRSTLDSLSFTEIETPLLFKSTPEGA---NEFLVPTRRKSYF---YA 233

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+A+G +  +  A  +R+ +     QPEFT ++   +    +Q+     
Sbjct: 234 LPQSPQQYKQLLMASGVKSYYQVARCFRDEDLRADRQPEFTQIDIEMSFADGKQVRHAVE 293

Query: 138 NIIRCAAEVANQK--IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            ++        +      F        +E   ++       Y  ID      +    D  
Sbjct: 294 QVVNNVWLDVKKSPLYVPFGTDQLVRSNEFPLMSYKSVLELY-GIDKPDLRSSLRFHDIS 352

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
               +       V         F         P+L I       R PA  +  +     +
Sbjct: 353 EFTTRVANPDFPVFEVCVLKQAFE--GSHYTIPDLLIQPDNYKSRRPAMFAIKSTTDLNN 410

Query: 256 PRFT 259
               
Sbjct: 411 WHQH 414



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 50/125 (40%), Gaps = 10/125 (8%)

Query: 236 TILDRYPAPESALANIY----PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P    + A+             + ++L    +E+      + D   Q++ F++ 
Sbjct: 521 YESTHHPFTMCSPADYDLLSTDPLAVHGEHYDLVVNGVEVGGGSRRIHDSNLQQYIFKEI 580

Query: 292 MQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +        + + +    L       P  +G A+GFDRL  ++ G+ +I +VI  P +Q 
Sbjct: 581 L-----GIQDPHRLFGHLLGAFESGCPPHAGFAIGFDRLCAMLLGSTSIRDVIAFPKNQK 635

Query: 351 NQEEI 355
            ++ +
Sbjct: 636 GRDPV 640


>gi|308235732|ref|ZP_07666469.1| aspartyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311114716|ref|YP_003985937.1| aspartate--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946210|gb|ADP38914.1| aspartate--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 598

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 72/202 (35%), Gaps = 21/202 (10%)

Query: 4   IPSQPWWNRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNET 57
           +PS+    +  +   RRP     L  R+ +  + R    +  F E+++ + ++ +P    
Sbjct: 124 LPSEDVRLKYRYLDLRRPSMQRNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG-- 181

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F     +         L  SP+   + L+ +G E+ +  A  +R+ +     QPEF
Sbjct: 182 -ARDFVVPARLV--PGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEF 238

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T L+   +  S E +M     +I    + A  +                 IT  EA  +Y
Sbjct: 239 TQLDMEMSFASQEDVMAMAERVIAAIWKEAGHE----------ITLPLPRITWQEAMDKY 288

Query: 178 ANIDLGTTLDNPDQPDRHLLYL 199
            +        NP          
Sbjct: 289 GSDKPDLRFGNPLIELTDFFKN 310



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPE--SALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P     +   + +  DP       +++     E+      +     Q    +  
Sbjct: 453 WTSMHHPFTMPSADWIDKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVL 512

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +K     E        L       P  +GIA+G+DR   ++ GA++I +VI  P
Sbjct: 513 GIDKA----EAEEKFGFLLEAFKYGAPPHAGIALGWDRTAAILAGASSIRDVIAFP 564


>gi|20139895|sp|Q92J82|SYD_RICCN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
          Length = 602

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 67/203 (33%), Gaps = 9/203 (4%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ I S +R     + F E  +  L   SP      R F   
Sbjct: 128 KHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEG---ARDFLVP 184

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+  
Sbjct: 185 SRMH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E +      ++         K  S     C P++E      ++       I + 
Sbjct: 242 MSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIIIA 301

Query: 184 TTLDNPDQPDRHLLYLQAQQAGI 206
              +     D  +     ++  I
Sbjct: 302 DVTEIFRDSDFTIFRENIKKGSI 324



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA----PESALANIYPADPR 257
           ++  +       +  I      E  E    I+        P                   
Sbjct: 418 EELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELLEL 477

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT 314
              ++++    IEL +       P      F          Y+E   +D+ F   +    
Sbjct: 478 TAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSI------AGYSEE-EVDKRFGGMIRAFK 530

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 531 FGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 570


>gi|295664859|ref|XP_002792981.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226278502|gb|EEH34068.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 410

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 68/238 (28%), Gaps = 17/238 (7%)

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           H  +F  L++ +  +S+   +      +        +K F  +                 
Sbjct: 182 HIRKFIGLDFEKTFQSHYHEVLSFAEDLLVFILSELKKRFKKEIEVVQRSYPKAGDFRLP 241

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              +   +     +    +    +   +  +  +  A +     I               
Sbjct: 242 KDGKALRLKYMDGVALLKEAGVDVSEQEKFENDLTTAMEKQLGRII---------RQKYD 292

Query: 233 NCCTILDRYPAPESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
               +LD++P           P DP F+  ++ +    E+ +    + D  E       E
Sbjct: 293 TDFYVLDKFPMAVRPFYTKACPQDPTFSNSYDFFMRGEEIMSGAQRINDAKEL------E 346

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                K  N      ED++       P  +G  +G +R+VM   G  NI      P  
Sbjct: 347 AAMFAKGLNPNDEGFEDYIGAFRQGCPLHAGGGLGLNRIVMFFLGLPNIRLATLFPRD 404


>gi|119025594|ref|YP_909439.1| aspartyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|154487055|ref|ZP_02028462.1| hypothetical protein BIFADO_00893 [Bifidobacterium adolescentis
           L2-32]
 gi|118765178|dbj|BAF39357.1| aspartyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|154084918|gb|EDN83963.1| hypothetical protein BIFADO_00893 [Bifidobacterium adolescentis
           L2-32]
          Length = 599

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 62/180 (34%), Gaps = 16/180 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R  +  + R    E  F EI++   ++ +P      R F     +    
Sbjct: 139 RRPSMQRNLKLRAQMSKAARHALEEMGFEEIETPTMIKSTPEG---ARDFVVPARLV--P 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A    E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAFVDQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    + A            +     + IT  +A  +Y +        NP   
Sbjct: 254 MAMAEKVIAAIWKSAG----------YDIKLPIQRITWQDAMDKYGSDKPDLRFGNPLIE 303



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 19/121 (15%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE-- 289
                +P         + +  DP       +++     E+      +     Q    +  
Sbjct: 453 WTSMHHPFTMPSKDWIDKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVL 512

Query: 290 ----KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               +E  +K     E +             P  +GIA+G+DR   ++ GA++I +VI  
Sbjct: 513 GITPEEAADKFGFLLEAFK---------YGAPPHAGIALGWDRTAAILAGADSIRDVIAF 563

Query: 346 P 346
           P
Sbjct: 564 P 564


>gi|307069545|ref|YP_003878022.1| putative aspartyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
 gi|306482805|gb|ADM89676.1| putative aspartyl-tRNA synthetase [Candidatus Zinderia insecticola
           CARI]
          Length = 567

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 66/176 (37%), Gaps = 14/176 (7%)

Query: 33  REYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAA 92
           R +  +N FIE+++  L       +  + F T    +++  K   L  SP+   + L+ +
Sbjct: 152 RNFLNKNNFIEVETPILSKITLGGS--KEFLT--FSKNNKNKFFALAQSPQIFKQLLMIS 207

Query: 93  GEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
             ++ +  A  +RN       QPEFT ++   +  + ++++     +I            
Sbjct: 208 NFDRYYQIAKCFRNENLRKDRQPEFTQIDCEMSFMNKKEIIFFFEKLI----------KK 257

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
            F+ +    F +P  I   +   +Y   D      N        ++    +   ++
Sbjct: 258 IFKKILNINFIKPFKILKFKKSIKYYGTDKPDLRINLKLLCFKNIFFINNKYIKKI 313



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 44/120 (36%), Gaps = 5/120 (4%)

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
                N  +    + +P     N       F+K ++L    +E+      +     Q   
Sbjct: 435 KKNNNNIKSYHHIFTSPLKKKFNKKNIFKIFSKSYDLVINGVEIGGGSIRIYKHKLQNKI 494

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           F+     KK I ++       FL  L    P   GIA G DRL+ ++    +I EVI  P
Sbjct: 495 FKILNINKKSIKSK----FNFFLNSLKLSTPPHGGIAFGIDRLLYIILNLKSIREVIAFP 550


>gi|184201002|ref|YP_001855209.1| aspartyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183581232|dbj|BAG29703.1| aspartyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 604

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 59/187 (31%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                   +  R+ +    R    E  F E+++ +L   +P      R F     +    
Sbjct: 130 RRPEPARIMRLRSEVNRVARTLLHEQGFTEVETPTLTRSTPEG---ARDFLVPARL--AP 184

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L   G EK F  A  +R+ +     QPEFT L+   +    + +
Sbjct: 185 GSWYALPQSPQLFKQLLQVGGIEKYFQIARCYRDEDFRADRQPEFTQLDVEASFVEEDDV 244

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +     I++    +             +  +    +T A+A A Y +       D     
Sbjct: 245 IALGEQIVKALWALIG----------VDITTPIPRMTYAQAMADYGSDKPDLRFDLKLTE 294

Query: 193 DRHLLYL 199
                  
Sbjct: 295 LTEYFKD 301



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 19/115 (16%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRF------EKEM 292
           + +P+    + +  DP       +++     E+      +     Q   F      E++ 
Sbjct: 452 FTSPKPEFMDTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQDRVFRVMGLSEEDA 511

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +EK              L       P   GIA G+DR+V L+ G  +I +VI  P
Sbjct: 512 REKFG----------FLLDAFQFGAPPHGGIAFGWDRVVALLAGTESIRDVIAFP 556


>gi|229586385|ref|YP_002844886.1| aspartyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511869|sp|C3PMI3|SYD_RICAE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|228021435|gb|ACP53143.1| Aspartyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 602

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 67/203 (33%), Gaps = 9/203 (4%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    ++ R+ I S +R     + F E  +  L   SP      R F   
Sbjct: 128 KHRFLDLRREKLHNNIILRSQIISHIRHLMTASGFTEFQTPILTASSPEG---ARDFLVP 184

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+  
Sbjct: 185 SRMH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 241

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E +      ++         K  S     C P++E      ++       I + 
Sbjct: 242 MSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIIIA 301

Query: 184 TTLDNPDQPDRHLLYLQAQQAGI 206
              +     D  +     ++  I
Sbjct: 302 DVTEIFRDSDFTIFRENIKKGSI 324



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA----PESALANIYPADPR 257
           ++  +       +  I      E  E    I+        P                   
Sbjct: 418 EELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELLEL 477

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT 314
              ++++    IEL +       P      F          Y+E   +D+ F   +    
Sbjct: 478 TAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSI------AGYSEE-EVDKRFGGMIRAFK 530

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 531 FGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 570


>gi|291397254|ref|XP_002715040.1| PREDICTED: aspartyl-tRNA synthetase 2, mitochondrial [Oryctolagus
           cuniculus]
          Length = 646

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 13/158 (8%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY- 252
           R       ++ G+ V  D         +      P            +P      ++I+ 
Sbjct: 450 RLECADLLEKKGV-VLRDPALFSFLWVVDFPLFLPKEDNPRELESAHHPFTAPHPSDIHL 508

Query: 253 ---PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                +   ++ ++L     E+      + +   Q +     ++       E   +    
Sbjct: 509 LYTEPEKVRSQHYDLVLNGSEIGGGSIRIHNAELQHYVLATLLK-------EDVKLLSHL 561

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L  L    P   GIA+G DRL+ LVTG+ +I +VI  P
Sbjct: 562 LQALDYGAPPHGGIALGLDRLMCLVTGSPSIRDVIAFP 599



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + FI+I++ +L + +PG     + F               L 
Sbjct: 181 LRLRSQMVMRMREYLCNLHGFIDIETPTLFKKTPGG---AKEFLVPSREPGKF---YSLP 234

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      + +    +
Sbjct: 235 QSPQQFKQLLMIGGFDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQQLIEGL 294

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ +           +T AEA A Y   D   T       D
Sbjct: 295 LQY----------SWPSDRGAVALPFPSMTFAEALATY-GTDKPDTRFGMKIID 337


>gi|291457466|ref|ZP_06596856.1| aspartate--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291381301|gb|EFE88819.1| aspartate--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 599

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 16/177 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    +  F E+++ + ++ +P      R F     +    
Sbjct: 139 RRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG---ARDFVVPARLV--P 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A+   E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAYVDQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           M     +I    + A  +                 IT  +A  +Y +        NP
Sbjct: 254 MAMTEKVIAAIWKSAGYE----------VQLPLPRITWKDAMDKYGSDKPDLRFGNP 300



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P         + +  DP       +++     E+      +     Q    +  
Sbjct: 453 WTSMHHPFTMPSKDWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVL 512

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              K+    E        L       P  +G+A+G+DR V ++ GA++I +VI  P
Sbjct: 513 GITKE----EADEKFGFLLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFP 564


>gi|296454587|ref|YP_003661730.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184018|gb|ADH00900.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 599

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    +  F E+++ + ++ +P      R F     +    
Sbjct: 139 RRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG---ARDFVVPARLV--P 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A+   E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAYVDQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    + A  +                 IT  +A  +Y +        NP   
Sbjct: 254 MAMTEKVIAAIWKSAGYE----------VQLPLPRITWKDAMDKYGSDKPDLRFGNPLVE 303

Query: 193 DRHLLYL 199
                  
Sbjct: 304 LTEYFKN 310



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P         + +  DP       +++     E+      +     Q    +  
Sbjct: 453 WTSMHHPFTMPSKDWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVL 512

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              K+    E        L       P  +G+A+G+DR V ++ GA++I +VI  P
Sbjct: 513 GITKE----EADEKFGFLLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFP 564


>gi|46190374|ref|ZP_00206443.1| COG0173: Aspartyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 586

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    +  F E+++ + ++ +P      R F     +    
Sbjct: 126 RRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEG---ARDFVVPARLV--P 180

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A+   E +
Sbjct: 181 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAYVDQEDV 240

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    + A  +                 IT  +A  +Y +        NP   
Sbjct: 241 MAMTEKVIAAIWKSAGYE----------VQLPLPRITWKDAMDKYGSDKPDLRFGNPLVE 290

Query: 193 DRHLLYL 199
                  
Sbjct: 291 LTEYFKN 297



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P         + +  DP       +++     E+      +     Q    +  
Sbjct: 440 WTSMHHPFTMPSKDWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVL 499

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              K+    E        L       P  +G+A+G+DR V ++ GA++I +VI  P
Sbjct: 500 GITKE----EADEKFGFLLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFP 551


>gi|407668|gb|AAD12351.1| unknown [Mycoplasma genitalium]
          Length = 177

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 11/146 (7%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
              I   +  ++  +    L +  E          +   P  E         +   +++F
Sbjct: 11  HLDIVKPNQYSFCWVVDFPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNEALSEQF 70

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQE--KKKIYNETYPIDEDFLACLTEMPQSS 320
           +L     E+ +    + DPI Q+        +  K     E Y             P   
Sbjct: 71  DLVLNGFEIGSGSIRINDPIVQKRLMNSLNIDPNKFAFLLEAYQ---------YGAPVHG 121

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G+ +G DRL+M++   +NI EVI  P
Sbjct: 122 GMGLGIDRLMMILNQTDNIREVIAFP 147


>gi|154253740|ref|YP_001414564.1| aspartyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|171769685|sp|A7HYC4|SYD_PARL1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|154157690|gb|ABS64907.1| aspartyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 607

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 63/197 (31%), Gaps = 30/197 (15%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L    L R+ I + +R    E  F E  +  L
Sbjct: 111 LPLPVFGEPDYPEDIRLTYRFLDLRRETLHRNILLRSKIIADIRRRMTEVGFNEFQTPIL 170

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     +        Y L  +P+   + ++ AG ++ F  A  +R+ 
Sbjct: 171 TASSPEG---ARDFLVPSRMH---PGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDE 224

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P EF  L+   +  +         ++      V +     F            
Sbjct: 225 DARADRSPGEFYQLDVEMSFVT-------QDDVFAAIEPVLHGLFEKFAEGKKVSSYPFT 277

Query: 167 YITVAEAFARYANIDLG 183
            I  AEA  +Y +    
Sbjct: 278 RIPYAEAIRKYGSDKPD 294



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 17/161 (10%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD---RYPAPESALANIYPADP--- 256
           + G+       +  I    + E  E    I+          YP  +    +   AD    
Sbjct: 423 ELGLIEEDIFKFCWIVDFPMFEWNEDEKKIDFSHNPFSMPNYPLDKFLKLDKDNADEILG 482

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL 313
               ++++    +EL +       P      FE         Y+++  ++  F   L   
Sbjct: 483 MTAFQYDIVCNGVELSSGAIRNHKPDVMYKAFEI------AGYDKS-VVETKFGGMLNAF 535

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   G+A G DR+VML+ G  N+ EV   P +Q  Q+
Sbjct: 536 KYGAPPHGGLAPGIDRMVMLLAGVENLREVTMFPMNQQAQD 576


>gi|85708162|ref|ZP_01039228.1| aspartyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85689696|gb|EAQ29699.1| aspartyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 604

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 57/185 (30%), Gaps = 16/185 (8%)

Query: 178 ANIDLGTTLDNPDQPDRHLLY-----LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              D G       + D   L        A+Q  +       +  I    + E  E    +
Sbjct: 388 LGPDDGLFFAAGKEKDAAKLAGAARTQIAEQLELIEQDCFKFCWIVDFPMYEYDEEAKKV 447

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM 292
           +        P  E               ++++     EL +       P      FE   
Sbjct: 448 DFSHNPFSMPQGEMEALESMDPLEIKAWQYDIVCNGYELSSGAIRNHKPEIMYKAFEI-- 505

Query: 293 QEKKKIYNETYPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 Y+    +D++F   +       P   G A G DR+VML+ G   I EVI  P +
Sbjct: 506 ----AGYDNA-TVDKEFGGMIEAFKLGAPPHGGSAPGIDRIVMLLAGEEAIREVIAFPMN 560

Query: 349 QSNQE 353
           Q  ++
Sbjct: 561 QKGED 565



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 60/166 (36%), Gaps = 16/166 (9%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  +    + R+ + +SLR+  +   F E  +  L   SP      R F     +    
Sbjct: 134 RREVMHRNIMLRSQVITSLRQRMIGQGFTEFQTPILTASSPEG---ARDFLVPSRMH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  +P+   + L+ +G ++ F  A  +R+ +       EF  L++  +  + E +
Sbjct: 189 NSFYALPQAPQMFKQMLMVSGFDRYFQIAPCFRDEDLRADRSLEFYQLDFEMSFVTQEDV 248

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +    ++    E  +               E   I  AEA  +Y 
Sbjct: 249 FQALEPVLAGVFEEFSG------GKTVTKSGEFPRIPYAEAMLKYG 288


>gi|317481697|ref|ZP_07940729.1| aspartyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916811|gb|EFV38201.1| aspartyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 599

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    +  F E+++ + ++ +P      R F     +    
Sbjct: 139 RRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEGA---RDFVVPARLV--P 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A+   E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAYVDQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    + A  +                 IT  +A  +Y +        NP   
Sbjct: 254 MAMTEKVIAAIWKSAGYE----------VQLPLPRITWKDAMDKYGSDKPDLRFGNPLVE 303

Query: 193 DRHLLYL 199
                  
Sbjct: 304 LTEYFKN 310



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P         + +  DP       +++     E+      +     Q    +  
Sbjct: 453 WTSMHHPFTMPSKDWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVL 512

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              K+    E        L       P  +G+A+G+DR V ++ GA++I +VI  P
Sbjct: 513 GITKE----EADEKFGFLLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFP 564


>gi|312132334|ref|YP_003999673.1| asps [Bifidobacterium longum subsp. longum BBMN68]
 gi|322689660|ref|YP_004209394.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
 gi|311773817|gb|ADQ03305.1| AspS [Bifidobacterium longum subsp. longum BBMN68]
 gi|320460996|dbj|BAJ71616.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
          Length = 599

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    +  F E+++ + ++ +P      R F     +    
Sbjct: 139 RRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEGA---RDFVVPARLV--P 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A+   E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAYVDQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    + A  +                 IT  +A  +Y +        NP   
Sbjct: 254 MAMTEKVIAAIWKSAGYE----------VQLPLPRITWKDAMDKYGSDKPDLRFGNPLVE 303

Query: 193 DRHLLYL 199
                  
Sbjct: 304 LTEYFKN 310



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P         + +  DP       +++     E+      +     Q    +  
Sbjct: 453 WTSMHHPFTMPSKDWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVL 512

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              K+    E        L       P  +G+A+G+DR V ++ GA++I +VI  P
Sbjct: 513 GITKE----EADEKFGFLLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFP 564


>gi|189438881|ref|YP_001953962.1| aspartyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|213691602|ref|YP_002322188.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|227546745|ref|ZP_03976794.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|239620721|ref|ZP_04663752.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|322691621|ref|YP_004221191.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|238692033|sp|B3DPM0|SYD_BIFLD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781717|sp|B7GPT0|SYD_BIFLI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189427316|gb|ACD97464.1| Aspartyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|213523063|gb|ACJ51810.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|227212707|gb|EEI80588.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|239516297|gb|EEQ56164.1| aspartyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|320456477|dbj|BAJ67099.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320457690|dbj|BAJ68311.1| aspartyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 599

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNETHIRAFSTELIIQDHI 72
                +  L  R+ +  + R    +  F E+++ + ++ +P      R F     +    
Sbjct: 139 RRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPEGA---RDFVVPARLV--P 193

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   A+   E +
Sbjct: 194 GSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQLDMEMAYVDQEDV 253

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M     +I    + A  +                 IT  +A  +Y +        NP   
Sbjct: 254 MAMTEKVIAAIWKSAGYE----------VQLPLPRITWKDAMDKYGSDKPDLRFGNPLVE 303

Query: 193 DRHLLYL 199
                  
Sbjct: 304 LTEYFKN 310



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPES--ALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P         + +  DP       +++     E+      +     Q    +  
Sbjct: 453 WTSMHHPFTMPSKDWIDKFDKDPEHAMSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVL 512

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              K+    E        L       P  +G+A+G+DR V ++ GA++I +VI  P
Sbjct: 513 GITKE----EADEKFGFLLEAFKYGAPPHAGLALGWDRTVSILAGADSIRDVIAFP 564


>gi|313637748|gb|EFS03107.1| aspartyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 182

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 7/153 (4%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           L     ++  +    +  +  +    L E  E              P  E        + 
Sbjct: 1   LRNKLGKELDLVNEEELAFLWVTDWPLFEYDEEAGRYVSAHHPFTLPKEEDIPLLETDSS 60

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACLT 314
               + +++     E+      +     Q   F           +E       FL   L 
Sbjct: 61  KVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRAL-----GFTDEAASEQFGFLMEALE 115

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   GIA+G DR+VM++ G NN+ + I  P
Sbjct: 116 YGTPPHGGIALGLDRIVMILAGRNNLRDTIAFP 148


>gi|260810833|ref|XP_002600127.1| hypothetical protein BRAFLDRAFT_204226 [Branchiostoma floridae]
 gi|229285413|gb|EEN56139.1| hypothetical protein BRAFLDRAFT_204226 [Branchiostoma floridae]
          Length = 519

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 69/198 (34%), Gaps = 27/198 (13%)

Query: 6   SQPWWNRDFHYRRR-----PFLLKRNMIQSSLRE---YFVEN-QFIEIDSMSL-QYSPGN 55
           ++    +  +   R       L  R+ +   +RE   +     +F+++++ +L + +PG 
Sbjct: 124 NEHLRLKHRYLDLRGSQLQHNLRLRSQVIMKMREVNKHLSSQFRFVDVETPTLFRRTPGG 183

Query: 56  ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
               R F      +        L  SP+   + L+  G ++ F  A  +R+ +     QP
Sbjct: 184 ---AREFVVPSREKGKF---FCLPQSPQQFKQLLMVGGVDRYFQIAKCYRDEDLRQDRQP 237

Query: 116 EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA 175
           EFT ++   +      + +    +++           ++ +           +   +A  
Sbjct: 238 EFTQVDIEMSFVDQRGVEQLIEELLQH----------AWPDGKGALTLPFPRMQYKDAMK 287

Query: 176 RYANIDLGTTLDNPDQPD 193
           +Y   D   T       D
Sbjct: 288 KY-GSDKPDTRFGMKLND 304


>gi|297720863|ref|NP_001172794.1| Os02g0139600 [Oryza sativa Japonica Group]
 gi|255670590|dbj|BAH91523.1| Os02g0139600 [Oryza sativa Japonica Group]
          Length = 166

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 19/169 (11%)

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           L    + +        ++AG+ V      +    + L E +      +   +L RYP+  
Sbjct: 5   LPKTLRIEYDEGIRMLKEAGVHVEAMGDLNTESEKKLGELVHTKYDTD-FYMLCRYPSAV 63

Query: 246 SALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                     DPR++  F+++    E+ +    +  P        ++ +E+         
Sbjct: 64  RPFYTMPCSDDPRYSNSFDVFVRGEEIISGAQRVHVP----EVLARQAEER--------G 111

Query: 305 ID----EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           ID      ++       P   G  +G +R+VML  G  NI +    P  
Sbjct: 112 IDVGSIAAYVDAFRYGAPPHGGFGVGLERVVMLFCGLGNIRKASLFPRD 160


>gi|167860683|gb|ACA05124.1| aspartyl-tRNA synthetase [Flammeovirga yaeyamensis]
          Length = 239

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 8/107 (7%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+ I   +R Y  + +FIE+++  L   +P      R F     +        Y
Sbjct: 139 REKLVLRHKIAQEVRRYLSDQEFIEVETPVLIKSTPEG---ARDFLVPSRMN---PGEFY 192

Query: 78  -LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
            L  SP+   + L+  G ++ F     +R+ +     QPEFT ++  
Sbjct: 193 ALPQSPQTFKQLLMVGGMDRYFQIVKCFRDEDLRADRQPEFTQIDCE 239


>gi|70923584|ref|XP_734779.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56507829|emb|CAH83628.1| hypothetical protein PC300606.00.0 [Plasmodium chabaudi chabaudi]
          Length = 221

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 17/105 (16%)

Query: 1   MHQIPSQPWWNRDFHYRRR-------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +    +D  Y+ R               ++ R  I   +R + ++ +++E+D+ 
Sbjct: 116 LLPLPDKYKGMKDIEYKYRKRYLDFLTNNEQKEKIITRFNITQEIRRFLLKKKYLEVDTP 175

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAA 92
            LQ  PG     + F T L     +   LYL+ +PE   KKL+ +
Sbjct: 176 MLQLLPGGA-LAKPFETYLKS---LDLVLYLRIAPELFLKKLIIS 216


>gi|221130529|ref|XP_002161050.1| PREDICTED: similar to Asparaginyl-tRNA synthetase CG10687-PA,
           partial [Hydra magnipapillata]
          Length = 512

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 100/349 (28%), Gaps = 75/349 (21%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           Q+ ++    R  H  +   L  R+ +    RE++    ++EI   +L ++  N      F
Sbjct: 228 QLDNRHLTLRGEHLSK--ILRIRSTVTHCFREHYFARGYVEITPPTLCHAK-NAYVSIPF 284

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
           ST+L +       LY                                        T +E 
Sbjct: 285 STKLAVSPSAPSTLY----------------------------------------THVEG 304

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
                 +E+L+    +++    +   +          NP  +                  
Sbjct: 305 ECPFIDFEELLNRIEDLVCDVVDRFLKSKEGALLSELNPDFKAPKRPFRRMKY------- 357

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                        + +L+A            + +    +   ++   +G     +L  +P
Sbjct: 358 ----------SEAIEWLRADGYKKDDGTFYEFGEDIPEMPERRMTDTIGE--PILLTHFP 405

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           A   +      P D R  +  +L    +         +D  ++      E  +KK++   
Sbjct: 406 ADVKAFYMQKDPKDRRVCEAVDLLMPGVGEVLGGSMRMDSYDEL----MEAYQKKELDPT 461

Query: 302 TYPIDED---FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            Y    D   F           G  +G DR +  +   N+I +V + P 
Sbjct: 462 PYYWYTDQRKF-----GTSSHGGYGLGLDRFITWLANRNHIRDVCFYPR 505


>gi|256066157|ref|XP_002570486.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|227299150|emb|CAY18004.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 450

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 15/168 (8%)

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-- 242
             D P    +  + +      I+          F  I    +     +     +  +P  
Sbjct: 258 QTDCPCLWFQAKITILLFSVHIKGLSIYEPGFHFLWINQFPLFEKNNLGQWKSV-HHPFT 316

Query: 243 ---APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                 +      P+        +L     E+      + +P  Q++ F + ++E     
Sbjct: 317 AASPETAHFLYTDPSKVIGLHH-DLVCNGQEVGGGSIRVHNPEVQKYIFTEILKE----N 371

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +        FL  L +  P   GIA+G DRL+ +   A +I +VI  P
Sbjct: 372 SCEMEY---FLTALNSGAPPHGGIALGLDRLIAIFVNAKSIRDVIAFP 416


>gi|239930096|ref|ZP_04687049.1| aspartyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291438434|ref|ZP_06577824.1| aspartyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291341329|gb|EFE68285.1| aspartyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 587

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 56/163 (34%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG    +   +  I    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRAGQFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALETQDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    +EL +      +P      FE           ET  ++E F   L 
Sbjct: 465 LDILGWQYDIVCNGVELSSGAIRNHEPEIMLKAFEI-----AGYDRET--VEEKFAGMLR 517

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 518 AFRFGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 66/200 (33%), Gaps = 19/200 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R  + S++R+      F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRTQVISAIRQKMTALGFNEMATPILSATSPEG---ARDFVVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
                    +    E    ++F       +  S    I   EA  +Y +   DL   L+ 
Sbjct: 245 -----EQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAKLEL 299

Query: 189 PDQPDRHLLYLQAQQAGIRV 208
            D  D          AG  V
Sbjct: 300 VDITDLFEGSEFKAFAGKHV 319


>gi|224532935|ref|ZP_03673545.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi WI91-23]
 gi|224512134|gb|EEF82525.1| asparaginyl-tRNA synthetase [Borrelia burgdorferi WI91-23]
          Length = 253

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 74/261 (28%), Gaps = 25/261 (9%)

Query: 92  AGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK 150
               KI+ F   +R        H  EF M+E   A       +    ++++        +
Sbjct: 8   MALSKIYTFGPTFRAENSNTTRHASEFWMIEPEMAFYKLNDNIALAEDLLKYLLSSILNE 67

Query: 151 IFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT--TLDNPDQPDRHLLYLQAQQAGIRV 208
                          + +   E +     I         N +           + +  + 
Sbjct: 68  CS-------------QDMDFLENYIEKGLIKKLENVINSNFEVITYTKAIEILENSKKKF 114

Query: 209 AHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACN 268
                W           +          ++  YP    A       D +  K  ++    
Sbjct: 115 EIKPYWGIDLQTDHERYLTEETFKKPV-VVIDYPKNFKAFYMKANKDNKTVKGMDILVPK 173

Query: 269 I-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFD 327
           I E+    +   D  +  +R ++     + +    + +D   L         SG  +G +
Sbjct: 174 IGEIIGGSEREDDLQKLENRIKELNLNIEHLN---WYLD---LRRF-GSAPHSGFGLGLE 226

Query: 328 RLVMLVTGANNINEVIWTPFS 348
           RLV   TG +NI + I  P +
Sbjct: 227 RLVQYSTGISNIRDSIPFPRT 247


>gi|260201701|ref|ZP_05769192.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289444110|ref|ZP_06433854.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289417029|gb|EFD14269.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46]
          Length = 260

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 8/133 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                   +  R+ + ++ R     + F+EI++ ++   +P      R F     +    
Sbjct: 134 RRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEG---ARDFLVPARLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   +    E 
Sbjct: 188 PGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDAED 247

Query: 132 LMKDCMNIIRCAA 144
           ++     ++    
Sbjct: 248 IIAISEEVLTELW 260


>gi|239942578|ref|ZP_04694515.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239989039|ref|ZP_04709703.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291446040|ref|ZP_06585430.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291348987|gb|EFE75891.1| aspartyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 597

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 56/160 (35%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG        +  I    + E+ E    I+        P    A       
Sbjct: 405 AVRVEAAKRAGHFEEGVFRFCWIVDFPMYERDEETGRIDFSHNPFSMPQGGLADLEEKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    IEL +      +P      FE    +++ +  E   +    L    
Sbjct: 465 LSILAWQYDIVCNGIELSSGAIRNHEPELMLKAFEIAGYDRETVEQEFAGM----LRAFR 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 521 LGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 70/226 (30%), Gaps = 25/226 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + +S+R   V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEG---ARDFVVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG-----TT 185
                    +    E    ++F+         S    I   E+  +Y N           
Sbjct: 245 -----EQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLEL 299

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS---DIFSRILIEKIEP 228
           +D  D          A +    +   DT       F  +    +E 
Sbjct: 300 VDISDVFADSGFKAFAGKHVRALPVPDTAGQSRKFFDGLGEYAVEH 345


>gi|297158885|gb|ADI08597.1| aspartyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 616

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG    +   +  I    + E+ E    I         P            
Sbjct: 405 AVRVEAARRAGHFEENVFRFCWIVDFPMFERNEDTGQIEFSHNPFSMPQGGLEALRTKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    +EL +      +P      FE     ++++  E   +    L    
Sbjct: 465 LDILAWQYDIVCNGVELSSGAIRNHEPDVMYQAFEIAGYSREEVEREFGGM----LRAFH 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 521 FGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 58/172 (33%), Gaps = 15/172 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + S++R+      F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRSAVISAIRQKMTAQGFNELATPILSATSPEG---ARDFLVPSRLH--A 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
                   +    E    ++F       +  S    +   EA  +Y +    
Sbjct: 245 ----EQEDVFQVIEKVMTELFEEFGGGRHVTSPFPRVPFREAMLKYGSDKPD 292


>gi|296139671|ref|YP_003646914.1| aspartyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296027805|gb|ADG78575.1| aspartyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 601

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 39/112 (34%), Gaps = 17/112 (15%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEK 295
           P PES               +++     E+      +     Q   F      E++ +EK
Sbjct: 454 PKPESIDTFDTDPGSALAYAYDIVCNGNEIGGGSIRIHRRDVQERVFAIMGIDEEQAREK 513

Query: 296 KKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                         L       P   GIA G+DR+V L+ GA +I EVI  P
Sbjct: 514 FG----------FLLDAFSYGAPPHGGIAFGWDRVVSLLAGAPSIREVIAFP 555



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 69/188 (36%), Gaps = 30/188 (15%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
           Q+  +P    +   + R            +  R+   +  R     N F EI++ +L   
Sbjct: 110 QLDEEP--GEEARLKYRYLDLRREGPAAAIKLRSQANAVARNILALNDFTEIETPTLTRS 167

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           +P      R F     ++       Y L  SP+   + L+ AG E+ +  A  +R+ +  
Sbjct: 168 TPEGA---RDFLVPARLR---PGTFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFR 221

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              QPEFT L+   +    E ++     I++    +   +I +              +T 
Sbjct: 222 ADRQPEFTQLDIEMSFVDQEDVIALGEQIVKALWSLIGHEIPT----------PIPRLTY 271

Query: 171 AEAFARYA 178
           AEA  R+ 
Sbjct: 272 AEAMRRFG 279


>gi|296479006|gb|DAA21121.1| aspartyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
          Length = 651

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L          ++ ++L     E+      + +   Q +  +  ++       
Sbjct: 505 HPSDIHLLYT--EPHKVRSQHYDLVLNGNEIGGGSIRIHNSELQHYVLDTVLK------- 555

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ LVTGA +I +VI  P
Sbjct: 556 EDVKLLSHLLQALDYGAPPHGGIALGLDRLMCLVTGAPSIRDVIAFP 602



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 51/126 (40%), Gaps = 8/126 (6%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F+++++ +L + +PG     + F               L 
Sbjct: 184 LRLRSQMVMKMREYLCNLHGFVDVETPTLFKRTPGG---AKEFVIPSREPGKF---YSLP 237

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 238 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGVQSLIEGL 297

Query: 140 IRCAAE 145
           ++ +  
Sbjct: 298 LQYSWP 303


>gi|328956043|ref|YP_004373376.1| aspartyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456367|gb|AEB07561.1| aspartyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 596

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 45/158 (28%), Gaps = 14/158 (8%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A   G+     D    +   +           +      +    +       P       
Sbjct: 426 ADALGVPRQGHDFLWVVDFPLFKYDAAEQRFASEHHPFTQPRDEDREKIATDPLAVGSC- 484

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACL-TE 315
            ++L     E       + +   Q    E     E   +++            L  L   
Sbjct: 485 TYDLVMDGFEAGGGGIRIHESDVQLKVLERLGFDEASAREQFG--------FLLDALDYG 536

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+ ML+T + +I +VI  P + S  +
Sbjct: 537 APPMGGCAFGLDRICMLLTDSASIRDVIAFPKTSSGSD 574



 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 20/205 (9%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIR 60
           D   R R            L  R+    ++R+   +  F EI++  L + +P      I 
Sbjct: 135 DTRLRYRYLDMRRPEVAAKLRLRDEFAFAVRKALHDRAFTEIETPVLGKSTPEGARDFIV 194

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
              T+      + +      SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 195 PSRTQPGSFYALPQ------SPQLLKQLLMIGGVERYYQVAKCYRDEDLRADRQPEFTQV 248

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + + ++ +  +++  A         +       P+ E      ++       +
Sbjct: 249 DVEMSFVTEDDVICEMEDVLLEAFTQVGVGFPAPLRR--IPYWEAMDTFGSDKPDTRYGM 306

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAG 205
            L    D  +  D  +    A+  G
Sbjct: 307 HLIDLSDTFEHSDFKVFAHAAKAEG 331


>gi|327296417|ref|XP_003232903.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326465214|gb|EGD90667.1| aspartyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 685

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 78/224 (34%), Gaps = 19/224 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R    ++LR    E +  F+EI++  L + +P      R F      Q      
Sbjct: 214 RQTLAFRAKANAALRRALEECEPPFLEIETPILFKSTPEGA---REFLVPTRNQ---GLA 267

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 268 YALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQPEFTQLDMEMSFAT------- 320

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E   +K+++              ++  EA   Y +    T  D   +  R 
Sbjct: 321 -AEDVITTTEALVKKLWASVMPEPLGPEPFHRMSYYEAMGSYGSDKPDTRFDM--KLHRV 377

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
             YL A   G   + +    + F        E  + +    +  
Sbjct: 378 EQYLPADFIGKISSLNSPVVEAFIVKGNGHPEETMRVLRSFMNT 421



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 41/126 (32%), Gaps = 10/126 (7%)

Query: 227 EPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P       E A   +          ++L    +EL      +   
Sbjct: 530 EPGQGGTAGIASTHHPFTAPRTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSA 589

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q       ++                L CL    P  +GIA+GFDRL+ ++ G  ++ 
Sbjct: 590 AVQEFVLRDILRV----PPSRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVR 645

Query: 341 EVIWTP 346
            VI  P
Sbjct: 646 NVIAFP 651


>gi|283783249|ref|YP_003374003.1| aspartate--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441361|gb|ADB13827.1| aspartate--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 598

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 72/195 (36%), Gaps = 21/195 (10%)

Query: 4   IPSQPWWNRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNET 57
           +PS+    +  +   RRP     L  R+ +  + R    +  F E+++ + ++ +P    
Sbjct: 124 LPSEDVRLKYRYLDLRRPSMQRNLKLRSDMAKAARHALEDMNFTEVETPTFIKSTPEGA- 182

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F     +         L  SP+   + L+ +G E+ +  A  +R+ +     QPEF
Sbjct: 183 --RDFVVPARLV--PGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEF 238

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T L+   +  S E +M     +I    + A  +                 IT  EA  +Y
Sbjct: 239 TQLDMEMSFASQEDVMAMAERVIAAIWKEAGHE----------ITLPLPRITWQEAMDKY 288

Query: 178 ANIDLGTTLDNPDQP 192
            +        NP   
Sbjct: 289 GSDKPDLRFGNPLIE 303



 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 39/116 (33%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPE--SALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P     +   + +  DP       +++     E+      +     Q       
Sbjct: 453 WTSMHHPFTMPSADWIDKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVL 512

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +K     E        L       P  +GIA+G+DR   ++ GA++I +VI  P
Sbjct: 513 GIDKA----EADEKFGFLLEAFKYGAPPHAGIALGWDRTAAILAGASSIRDVIAFP 564


>gi|146299008|ref|YP_001193599.1| aspartyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|189082098|sp|A5FKJ2|SYD_FLAJO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146153426|gb|ABQ04280.1| aspartyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 583

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 74/228 (32%), Gaps = 28/228 (12%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    LL R+ +   +R+Y  +  F E+++  L   +P      R F     + +  
Sbjct: 133 RRNPVKNSLLFRHKVAMEVRKYLSDLDFCEVETPYLIKSTPEG---ARDFVVPSRMNE-- 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDI 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--------NIDLGT 184
           +     + R   +                  +   IT   A   Y          +  G 
Sbjct: 248 LNVFEGLTRHLLKEIKGIEVD----------KFPRITYDYAMKTYGNDKPDIRFGMKFGE 297

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLG 231
             +     +  +        GI V    +        ++     P +G
Sbjct: 298 LNEFAQHKEFPVFNAAELVVGIAVPGAGNYTRKEIDGLIDWVKRPQVG 345



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 58/194 (29%), Gaps = 17/194 (8%)

Query: 162 FSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL----YLQAQQAGIRVAHDDTWSDI 217
           F + + +            D+   L  P    R  L       A + G+R   +     +
Sbjct: 367 FYDNDDLAKWAKATEANPGDMIFVLSGPANKTRAQLSALRMELATRLGLRNPEEFAPLWV 426

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
               L+E  E +   +        P PE                +++     E+      
Sbjct: 427 VDFPLLELDEESGRYHAMHHPFTSPKPEDMALLETEPGKVRANAYDMVLNGNEIGGGSIR 486

Query: 278 LLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
           + D   Q+  F+     E + K +            +       P   G+A G DRLV +
Sbjct: 487 IHDKATQQLMFKYLGFTEEEAKAQFG--------FLMDAFQFGAPPHGGLAFGLDRLVAI 538

Query: 333 VTGANNINEVIWTP 346
           + G   I + I  P
Sbjct: 539 LGGQETIRDFIAFP 552


>gi|298252816|ref|ZP_06976610.1| aspartyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297533180|gb|EFH72064.1| aspartyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 585

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 72/195 (36%), Gaps = 21/195 (10%)

Query: 4   IPSQPWWNRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNET 57
           +PS+    +  +   RRP     L  R+ +  + R    +  F E+++ + ++ +P    
Sbjct: 111 LPSEDVRLKYRYLDLRRPSMQRNLKLRSDMAKAARHALEDMNFTEVETPTFIKSTPEGA- 169

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F     +         L  SP+   + L+ +G E+ +  A  +R+ +     QPEF
Sbjct: 170 --RDFVVPARLV--PGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEF 225

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T L+   +  S E +M     +I    + A  +                 IT  EA  +Y
Sbjct: 226 TQLDMEMSFASQEDVMAMAERVIAAIWKEAGHE----------ITLPLPRITWQEAMDKY 275

Query: 178 ANIDLGTTLDNPDQP 192
            +        NP   
Sbjct: 276 GSDKPDLRFGNPLIE 290



 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 39/116 (33%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPE--SALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P     +   + +  DP       +++     E+      +     Q       
Sbjct: 440 WTSMHHPFTMPSADWIDKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVL 499

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +K     E        L       P  +GIA+G+DR   ++ GA++I +VI  P
Sbjct: 500 GIDKA----EADEKFGFLLEAFKYGAPPHAGIALGWDRTAAILAGASSIRDVIAFP 551


>gi|255936415|ref|XP_002559234.1| Pc13g08090 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583854|emb|CAP91878.1| Pc13g08090 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 682

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 44/126 (34%), Gaps = 10/126 (7%)

Query: 227 EPNLGINCCTILDRYPAPESALANIYP---ADPRFT--KRFELYACNIELCNACDELLDP 281
           EP  G         +P               DP       ++L    +EL      + D 
Sbjct: 530 EPGQGGAAGFSSTHHPFTAPKTPADVDLLLTDPTKAVADHYDLVVNGVELGGGSRRIHDA 589

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q   F   ++       E        L  L +  P  +G+A+GFDRLV ++ G  ++ 
Sbjct: 590 AVQEFIFRDILKMPA----ERLADFSHLLDALRSGCPPHAGLALGFDRLVAVMLGKESVR 645

Query: 341 EVIWTP 346
           +VI  P
Sbjct: 646 DVIAFP 651



 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 73/194 (37%), Gaps = 25/194 (12%)

Query: 12  RDFHYRR-------RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRA 61
            +  Y +       R  L  R    +  ++   + +  F+EI++  L + +P      R 
Sbjct: 199 PEQRYLQLRSDAELRKALRFRARAHNLCKKELEQCRPPFVEIETPLLFKSTPEG---ARE 255

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F      +        L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+
Sbjct: 256 FIVPTRRE---GLAYALPQSPQQYKQILMASGLPRYYQFARCFRDEDLRADRQPEFTQLD 312

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  + + +M+    +IR        +++S    +  P      ++  E  A+Y   D
Sbjct: 313 MEMSFATGDDVMRTVEGVIR--------RLWSSLMKDPAPEGPFRKVSYQEVMAKY-GSD 363

Query: 182 LGTTLDNPDQPDRH 195
              T    +     
Sbjct: 364 KPDTRYGMEIIRLD 377


>gi|255348919|ref|ZP_05380926.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503459|ref|ZP_05381849.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 70s]
          Length = 582

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 60/164 (36%), Gaps = 15/164 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL  L A++  +  +    +  I    L  K E  L           P  E         
Sbjct: 408 HLRRLIAKERQLYDSTQYNFVWITDFPLFAKEEGELC--PEHHPFTAPLDEDISLLDSDP 465

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
               +  ++L     E+ +    + +P  Q   F      +   K+K           F+
Sbjct: 466 FAVRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFG--------FFI 517

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             L+   P   GIA+G DR++M++TGA  I EVI  P +Q   +
Sbjct: 518 DALSFGTPPHLGIALGLDRIMMVLTGAETIREVIAFPKTQKAGD 561



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 56/161 (34%), Gaps = 18/161 (11%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLY 77
             L+ R+ +  + R+Y  E  F E+ +  L + +P     ++            + +   
Sbjct: 142 DRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGARDYLVPSRIYPGNFYALPQ--- 198

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   +    E L     
Sbjct: 199 ---SPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQPEFTQIDMEMSFGGPEDLFPVVE 255

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++     V                +    +T  EA   Y 
Sbjct: 256 ELVTRLFAVKG----------IELKAPFLRMTYQEAKDSYG 286


>gi|117928541|ref|YP_873092.1| aspartyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|166225311|sp|A0LUJ6|SYD_ACIC1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|117649004|gb|ABK53106.1| aspartyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 592

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 70/212 (33%), Gaps = 30/212 (14%)

Query: 3   QIPSQPWW----NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
            +P         N +   + R            L  R+ +    RE    ++F+E+++  
Sbjct: 106 PLPFPVTGPVEVNEETRLKYRYLDLRRPGPARALRLRSEMNRLAREVMARHRFVEVETPY 165

Query: 49  LQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
           L   +P      R F     +Q        L  SP+   + L+ AG E+ +  A  +R+ 
Sbjct: 166 LTRSTPEGA---RDFLVPARLQ--PGHWYALPQSPQLFKQLLMVAGLERYYQLARCFRDE 220

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     QPEFT L+   +  + + +M    ++I                           
Sbjct: 221 DFRADRQPEFTQLDIEMSFVTEDDVMALAEDVIATLWSQLAGVEL---------ALPLPR 271

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +T AEA  R+   D        +  D    + 
Sbjct: 272 LTYAEAMRRF-GSDKPDLRFGQEIVDLTKFFA 302



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 48/135 (35%), Gaps = 15/135 (11%)

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIE 283
            EP+      ++   + AP+    + +   P       +++ A   E+      +     
Sbjct: 430 FEPDGAGGWTSVHHPFTAPKPEWMDRFADKPGEALAAAYDIVANGNEIGGGSIRIHRADV 489

Query: 284 QRHRFE----KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN 338
           Q+  FE     E +   K            L       P   GIA G+DR+  L+ G  +
Sbjct: 490 QQRVFEVLGISEAEANAKFG--------FLLEAFRYGPPPHGGIAFGWDRIAALLAGVES 541

Query: 339 INEVIWTPFSQSNQE 353
           I +VI  P + S  +
Sbjct: 542 IRDVIAFPKTASGTD 556


>gi|255507138|ref|ZP_05382777.1| aspartyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525587|emb|CBJ15065.1| aspartyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435147|gb|ADH17325.1| aspartyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296438867|gb|ADH21020.1| aspartyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 582

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 60/164 (36%), Gaps = 15/164 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL  L A++  +  +    +  I    L  K E  L           P  E         
Sbjct: 408 HLRRLIAKERQLYDSTQYNFVWITDFPLFAKEEGELC--PEHHPFTAPLDEDISLLDSDP 465

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
               +  ++L     E+ +    + +P  Q   F      +   K+K           F+
Sbjct: 466 FAVRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFG--------FFI 517

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             L+   P   GIA+G DR++M++TGA  I EVI  P +Q   +
Sbjct: 518 DALSFGTPPHLGIALGLDRIMMVLTGAETIREVIAFPKTQKAGD 561



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 56/161 (34%), Gaps = 18/161 (11%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLY 77
             L+ R+ +  + R+Y  E  F E+ +  L + +P     ++            + +   
Sbjct: 142 DRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGARDYLVPSRIYPGNFYALPQ--- 198

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   +    E L     
Sbjct: 199 ---SPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQPEFTQIDMEMSFGGPEDLFPVVE 255

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++     V                +    +T  EA   Y 
Sbjct: 256 ELVTRLFAVKG----------IELKAPFLRMTYQEAKDSYG 286


>gi|297243526|ref|ZP_06927458.1| aspartyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296888571|gb|EFH27311.1| aspartyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 585

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 72/195 (36%), Gaps = 21/195 (10%)

Query: 4   IPSQPWWNRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMS-LQYSPGNET 57
           +PS+    +  +   RRP     L  R+ +  + R    +  F E+++ + ++ +P    
Sbjct: 111 LPSEDVRLKYRYLDLRRPSMQRNLKLRSDMAKAARHALEDMNFTEVETPTFIKSTPEG-- 168

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
             R F     +         L  SP+   + L+ +G E+ +  A  +R+ +     QPEF
Sbjct: 169 -ARDFVVPARLV--PGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEF 225

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T L+   +  S E +M     +I    + A  +                 IT  EA  +Y
Sbjct: 226 TQLDMEMSFASQEDVMAMAERVIAAIWKEAGHE----------IALPLPRITWQEAMDKY 275

Query: 178 ANIDLGTTLDNPDQP 192
            +        NP   
Sbjct: 276 GSDKPDLRFGNPLIE 290



 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 39/116 (33%), Gaps = 9/116 (7%)

Query: 236 TILDRYPAPE--SALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                +P     +   + +  DP       +++     E+      +     Q       
Sbjct: 440 WTSMHHPFTMPSADWIDKFDKDPEHAMSDSYDIVCNGNEMGGGSVRIHRDDIQDRVLNVL 499

Query: 292 MQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +K     E        L       P  +GIA+G+DR   ++ GA++I +VI  P
Sbjct: 500 GIDKA----EADEKFGFLLEAFKYGAPPHAGIALGWDRTAAILAGASSIRDVIAFP 551


>gi|115397899|ref|XP_001214541.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114192732|gb|EAU34432.1| aspartyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 561

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 14/163 (8%)

Query: 194 RHLLYLQAQQAGIRVAHDD----TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
           R  L+  A  +G + A          D          EP  G         +P      A
Sbjct: 371 RRALHSAAVSSGFKPAPTGFDFLWIVDFPLFSPSSDAEPGQGGAAGISSTHHPFTAPKTA 430

Query: 250 NIYP---ADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE-KKKIYNETY 303
                  +DP       ++L    +EL      + D   Q       ++   +++ + ++
Sbjct: 431 ADVDLLLSDPTRVVADHYDLVVNGVELGGGSRRIHDAAVQELIMRDVLKMPAERLADFSH 490

Query: 304 PIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            +D   L      P  +G+A+GFDRLV L+ G  ++ +VI  P
Sbjct: 491 LLDA--LRA--GCPPHAGLALGFDRLVALMLGKESVRDVIAFP 529



 Score = 75.8 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 18/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R  + +  +E   + +  F+EI++  L + +P      R F      +      
Sbjct: 91  REALRFRAQVHNICKEELEQCRPAFVEIETPLLFKSTPEGA---REFLVPTRKK---GLA 144

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  + + +M+ 
Sbjct: 145 YALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLDLEMSFATGDDVMRT 204

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
              IIR        +++S    +  P      +   ++ +RY   D   T    +     
Sbjct: 205 VEGIIR--------RLWSSLMKDTAPSGPFRRMAYQDSMSRY-GSDKPDTRFGMEISRID 255

Query: 196 LL 197
            L
Sbjct: 256 YL 257


>gi|156121091|ref|NP_001095692.1| aspartyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
 gi|182689573|sp|A6QPU5|SYDM_BOVIN RecName: Full=Aspartyl-tRNA synthetase, mitochondrial; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS; Flags:
           Precursor
 gi|151554225|gb|AAI49493.1| DARS2 protein [Bos taurus]
          Length = 651

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L          ++ ++L     E+      + +   Q    +  ++       
Sbjct: 505 HPSDIHLLYT--EPHKVRSQHYDLVLNGNEIGGGSIRIHNSELQHCVLDTVLK------- 555

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ LVTGA +I +VI  P
Sbjct: 556 EDVKLLSHLLQALDYGAPPHGGIALGLDRLMCLVTGAPSIRDVIAFP 602



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 51/126 (40%), Gaps = 8/126 (6%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F+++++ +L + +PG     + F               L 
Sbjct: 184 LRLRSQMVMKMREYLCNLHGFVDVETPTLFKRTPGG---AKEFVIPSREPGKF---YSLP 237

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 238 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGVQSLIEGL 297

Query: 140 IRCAAE 145
           ++ +  
Sbjct: 298 LQYSWP 303


>gi|114565514|ref|XP_001149965.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 2
           [Pan troglodytes]
          Length = 590

 Score = 89.7 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 187 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGKF---YSLP 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T AEA A Y   D   T       D
Sbjct: 301 LQY----------SWPNDKDPVVVPFPTMTFAEALATY-GTDKPDTRFGMKIID 343



 Score = 49.6 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 28/86 (32%), Gaps = 10/86 (11%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L          ++ ++L     E+      + +   QR+     ++       
Sbjct: 508 HPSDIHLLYT--EPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLK------- 558

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMG 325
           E   +    L  L    P   GIA+G
Sbjct: 559 EDVKMLSHLLQALDYGAPPHGGIALG 584


>gi|119180393|ref|XP_001241672.1| hypothetical protein CIMG_08835 [Coccidioides immitis RS]
          Length = 684

 Score = 89.7 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 18/172 (10%)

Query: 194 RHLLYLQAQQAGIRVA----HDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-----AP 244
           R  ++  A + G + A    H    +           EP  G         +P      P
Sbjct: 494 RRAIHKAAVETGFKAAPTGFHFLWVTHFPLFSPSSDSEPGQGGTAGIASTHHPFTAPLTP 553

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           E     +          +++    +EL      +     Q       ++       E+  
Sbjct: 554 EDVSLLLTDPTKATADHYDIVVNGVELGGGSRRIHSAEVQEFILRDILKM-----PESRL 608

Query: 305 ID-EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
            D    L  L    P  +GIA+GFDRL+ ++ G  ++ +VI  P  +S + E
Sbjct: 609 ADFSHLLDALRAGCPPHAGIALGFDRLIAVMLGKESVRDVIAFP--KSGKGE 658



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 17/163 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R      LRE   +    F+E+++  L + +P      R F             
Sbjct: 215 RQALAFRARANKVLREVLEQCDPPFMEVETPLLFKSTPEGA---REFLVPTRRP---GLA 268

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+++G  + + FAH +R+ +     QPEFT L+   +    E +M  
Sbjct: 269 YALPQSPQQYKQILMSSGVPRYYQFAHCFRDEDLRADRQPEFTQLDMEMSFARGEDVMST 328

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
              +IR        K++S         S    +T  EA ++Y 
Sbjct: 329 IEQVIR--------KLWSTLMPEQLDASPFPRMTYNEAMSKYG 363


>gi|309800496|ref|ZP_07694649.1| lysyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308115876|gb|EFO53399.1| lysyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 104

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 14/81 (17%)

Query: 1   MHQIPSQPWWNRDFH--YRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R              + R+ I S +R Y  +  F+E+++ 
Sbjct: 22  LRPLPEKFHGLTDVETIYRKRYLDLISNRESFERFVTRSKIISEIRRYLDQKGFLEVETP 81

Query: 48  SLQYSPGNETHIRAFSTELII 68
            L    G     R F T    
Sbjct: 82  VLHNEAGGAA-ARPFITHHNA 101


>gi|116670838|ref|YP_831771.1| aspartyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|166225316|sp|A0JXA1|SYD_ARTS2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|116610947|gb|ABK03671.1| aspartyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 596

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 72/195 (36%), Gaps = 22/195 (11%)

Query: 11  NRDFHYR-RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +   RRP     +  R+      RE    + ++EI++ +L   +P      R F  
Sbjct: 120 LKHRYLDLRRPGPARNMRLRSEANRVARELLHRDGYVEIETPTLTRSTPEG---ARDFVV 176

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +         L  SP+   + L   G EK +  A  +R+ +     QPEFT L+   
Sbjct: 177 PARL--APGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQPEFTQLDIEA 234

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    + ++    +I++            +Q ++    +  + IT A+A ARY   D   
Sbjct: 235 SFVEQDDIISLGESIVKAL----------WQLIDVEIPTPIQRITYADAMARY-GSDKPD 283

Query: 185 TLDNPDQPDRHLLYL 199
                +  +    + 
Sbjct: 284 LRFGLELTELTEFFK 298



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 17/116 (14%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE------K 290
             + +P+    + +  DP       +++     E+      + +   Q   FE       
Sbjct: 448 HAFTSPKPEFMDSFDKDPESALSYAYDIVCNGNEIGGGSIRIHERDVQERVFELMGLDKA 507

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + + K     E +             P   GIA G+DR+V L+ G  +I +VI  P
Sbjct: 508 DAETKFGFLLEGFKF---------GAPPHGGIAFGWDRVVALLAGVESIRDVIAFP 554


>gi|320588341|gb|EFX00810.1| aspartyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 684

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 12/144 (8%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP---ADP--RFTKRFELYACNIEL 271
           +F+R +    EP  G +       +P               DP       ++L    +EL
Sbjct: 510 MFTRDVDTASEPGQGGHAGFSATHHPFTAPLTTADLDLLATDPLRARADHYDLVVNGVEL 569

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLV 330
                 +     Q       +Q                LA L    P  +G+A+GFDRLV
Sbjct: 570 GGGSRRIHVAAVQELVLRHVLQMDDAGV--AQF--AHLLAALRAGCPPHAGMALGFDRLV 625

Query: 331 MLVTGANNINEVIWTPFSQSNQEE 354
            L+ G  ++ +VI  P  +S + E
Sbjct: 626 ALLAGTPSVRDVIAFP--KSMKGE 647



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 11/153 (7%)

Query: 3   QIPSQPWWNR-DFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIR 60
              ++    R     +RR  L  R+ +   LR+      F E ++  L + +P      R
Sbjct: 154 PATARHLQMRFSAALQRR--LAFRSDVADRLRQLLTGAGFREFETPLLFKSTPEG---AR 208

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQPEFTM 119
            F      +        L  SP+   + L+ +      F FA  +R+ +     QPEFT 
Sbjct: 209 EFVVPTRRRGWA---YALPQSPQQFKQMLMASGVAASYFQFARCFRDEDLRADRQPEFTQ 265

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
           L+   A  + E +M+    ++R       Q   
Sbjct: 266 LDLEMAFATGEHVMQTVEQLVRDLYCHIQQTYV 298


>gi|326404837|ref|YP_004284919.1| aspartyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325051699|dbj|BAJ82037.1| aspartyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 595

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 58/194 (29%), Gaps = 23/194 (11%)

Query: 15  HYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
            YR    RR  L    + R  + + LR       F E  +  L   SP      R F   
Sbjct: 127 RYRFLDLRREKLHRNIMLRANVIAWLRREMTARGFTEFTTPILTASSPEG---ARDFLVP 183

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYR 124
             +     +   L  +P+   + L+ AG ++ F  A  +R+        P EF  L++  
Sbjct: 184 SRVH--PGQFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEASRADRAPGEFYQLDFEM 241

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +  +         ++      V       F             I   EA  +Y   D   
Sbjct: 242 SFVT-------QEDVFATIEPVLGGLFREFGGGRSVTQWPFPRIAYDEALLKY-GSDKPD 293

Query: 185 TLDNPDQPDRHLLY 198
             +     D    +
Sbjct: 294 LRNPLLITDVTEAF 307



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 49/157 (31%), Gaps = 15/157 (9%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
             G+       +  I    + E+ E    I         P       N          ++
Sbjct: 418 DLGLIDGAKFEFCWIVDFPMYERDEETGQIVFSHNPFSMPQGGLEALNGQDPLTIKAFQY 477

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEM 316
           ++    +EL +       P      FE      +E++ +       +             
Sbjct: 478 DIVCNGVELSSGAIRNHRPDIMLRAFEIAGYGAEEVEARFGGMLNAF---------RYGA 528

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G A G DR+VML+    N+ EVI  P +Q  Q+
Sbjct: 529 PPHGGSAPGVDRMVMLLADEPNLREVIAFPLNQQGQD 565


>gi|302657987|ref|XP_003020704.1| hypothetical protein TRV_05230 [Trichophyton verrucosum HKI 0517]
 gi|291184561|gb|EFE40086.1| hypothetical protein TRV_05230 [Trichophyton verrucosum HKI 0517]
          Length = 621

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 83/237 (35%), Gaps = 21/237 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R    ++LR    E +  F+E+++  L + +P      R F      Q      
Sbjct: 150 RQSLAFRAKANAALRRALEECEPPFLEVETPILFKSTPEG---AREFLVPTRNQ---GLA 203

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 204 YALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQPEFTQLDMEMSFAT------- 256

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E   +K+++              ++  EA A Y +    T  D   +  R 
Sbjct: 257 -AEDVITTTEALVKKLWASVMPEPLGPEPFPRMSYYEAMASYGSDKPDTRFDM--KLHRV 313

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
             YL A   G   + +    + F        E  + +    +    P  +  L N  
Sbjct: 314 EQYLPADFIGKISSLNSPVVEAFIVKGNGHPEETMRVLRSFMNT--PEAKPFLENPD 368



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 41/126 (32%), Gaps = 10/126 (7%)

Query: 227 EPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P       E A   +          ++L    +EL      +   
Sbjct: 466 EPGQGGTAGIASTHHPFTAPRTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSA 525

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q       ++                L CL    P  +GIA+GFDRL+ ++ G  ++ 
Sbjct: 526 AVQEFVLRDILKV----PPSRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTPSVR 581

Query: 341 EVIWTP 346
            VI  P
Sbjct: 582 NVIAFP 587


>gi|223933851|ref|ZP_03625817.1| Asparagine--tRNA ligase [Streptococcus suis 89/1591]
 gi|223897469|gb|EEF63864.1| Asparagine--tRNA ligase [Streptococcus suis 89/1591]
          Length = 353

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 78/217 (35%), Gaps = 11/217 (5%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++      RN I  +  E+F +N FI+ DS  L  +   ++      
Sbjct: 125 MDNRHLWLRSR--KQVAIQQIRNAIIYATYEFFEKNGFIKFDSPILSGNAAEDS------ 176

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEW 122
           TEL   D+  +P YL  S +   +    A   ++F F   +R  +     H  EF M++ 
Sbjct: 177 TELFETDYFGQPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDA 235

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
             +  S+E+ +      ++   +    +               +   +AE F R A  D 
Sbjct: 236 EYSFLSHEESLDLQEAYVKALIQGVIDRAPQALETLERDVDALKRY-IAEPFKRVAYDDA 294

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFS 219
            T L   +  +                H+   S+ F 
Sbjct: 295 ITLLQEHEADEDTDYEHIEHGDDFGSPHETWISNYFG 331


>gi|302694319|ref|XP_003036838.1| hypothetical protein SCHCODRAFT_45975 [Schizophyllum commune H4-8]
 gi|300110535|gb|EFJ01936.1| hypothetical protein SCHCODRAFT_45975 [Schizophyllum commune H4-8]
          Length = 654

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 44/133 (33%), Gaps = 11/133 (8%)

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESALAN--IYPADPRFTK----RFELYACNIELCNA 274
           +     E    +        +    + +        D R  +     ++L    +E+   
Sbjct: 490 LFTNADEDKEFLAHGRWSSSHHPFTAPMWEDVPKMYDGRINEVRGQHYDLVLNGVEIGGG 549

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLV 333
              + D   Q H F   +Q             E  L  L    P   GIA+GFDR++ ++
Sbjct: 550 SVRVHDAAMQDHIFTNILQLS----PSEKAPFEHLLHALRCGAPPHGGIALGFDRIMSIL 605

Query: 334 TGANNINEVIWTP 346
               +I +VI  P
Sbjct: 606 CNTPSIRDVIAFP 618



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 61/208 (29%), Gaps = 27/208 (12%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQ-------FIEID 45
                   N D   R R            + KR+ +  + R    +         F E++
Sbjct: 132 PSDVTHLANEDLRARYRYLDLRRTALSENIQKRSKVAHTARTVLEQEGTQHVHLGFTEVE 191

Query: 46  SMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLA-AGEEKIFCFAH 102
           +  L + SP     ++         +D       LQ SP+   + L+     ++ F  A 
Sbjct: 192 TPVLLRSSPEGAREYLVPSRI-ARAEDDRPVFYALQQSPQQPKQLLICSGAVDRYFQLAK 250

Query: 103 AWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
            +R+       QPEFT ++   A  S+           R         I           
Sbjct: 251 CFRDEGGRKDRQPEFTQIDMEMAFVSWGPDEASLARGWRIGGAEVRDTIERLVPAMWAAA 310

Query: 163 S------EPEYITVAEAFARYANIDLGT 184
                  +   +T  EA  R+ +    T
Sbjct: 311 EGTELPSDFPVMTYQEAMNRFGSDKPDT 338


>gi|320009829|gb|ADW04679.1| aspartyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 605

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG        +  +    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRAGHFEEGVFRFCWVVDFPMYEKDEETGRIDFSHNPFSMPQGGLEDLETKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    IEL +      +P      FE    +++ + +E   +    L    
Sbjct: 465 LDILAWQYDIVCNGIELSSGAIRNHEPELMIKAFEIAGYDRETVEHEFAGM----LRAFR 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 521 LGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 70/226 (30%), Gaps = 25/226 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + +S+R   V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEG---ARDFVVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG-----TT 185
                    +    E    ++F       +  S    I   E+  +Y N           
Sbjct: 245 -----EQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFRESMLKYGNDKPDLRAKLEL 299

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS---DIFSRILIEKIEP 228
           +D  D          A +    +   DT       F  +    +E 
Sbjct: 300 VDISDIFADSGFKAFAGKHVRALPVPDTAGQSRKFFDGLGEYAVEH 345


>gi|330993298|ref|ZP_08317234.1| Aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759700|gb|EGG76208.1| Aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 598

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 59/188 (31%), Gaps = 15/188 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R  + +SLR    +  F+E  +  L   SP      R F     +    
Sbjct: 134 RREKVHRNIMLRAQVIASLRRRMTDLGFVEFQTPILTASSPEG---ARDFLVPARMH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            +   L  +P+   +  + AG ++ F  A  +R+        P EF  L++  A  + E 
Sbjct: 189 GRFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFEMAFATQED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++              +          E I  A A A Y   D     +    
Sbjct: 249 VFATLEPVMEGVFREFGGGRIVSE-------GPFERIPYATAMAVY-GSDKPDLRNPLRL 300

Query: 192 PDRHLLYL 199
            D    + 
Sbjct: 301 SDVTEAFA 308



 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 50/157 (31%), Gaps = 11/157 (7%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A +  +   +   +  I    + E+ E    I+        P                  
Sbjct: 416 ATELDLIEQNAFRFCWITDFPMYERNEETGQIDFSHNPFSMPQGGMDALLNQDPLTIKAF 475

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEM 316
           ++++    IEL +       P      FE         Y     ++  F   L       
Sbjct: 476 QYDIVCNGIELSSGAIRNHQPDVMIRAFEI------AGY-PASEVEARFGGMLNAFRYGA 528

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 529 PPHGGSAPGVDRIVMLLADEPNIREVILFPLNQQGED 565


>gi|255645475|gb|ACU23233.1| unknown [Glycine max]
          Length = 221

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 66/230 (28%), Gaps = 17/230 (7%)

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           M+E   A    +  M      ++   +                  E       +      
Sbjct: 1   MVEPEIAFAELKDDMNCAEAYVKFMCQWLLDNCLED--------MEFMADKFDKGCIDRL 52

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
            +   T        +   +   A + G +  ++  W    +      +   +      I+
Sbjct: 53  KLVASTPFIRVTYTEAVEILEDAVKNGKKFENEVKWGIDLASEHERYLTE-VKFQKPVIV 111

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
             YP    A       D       +  A    L     EL+   +   R++      K++
Sbjct: 112 YNYPKDIKAFYMRLNDD------LKTVAAMDVLVPKVGELIGGSQMEERYDVIQTRIKEM 165

Query: 299 YNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                P  E +L        + +G  +GF+R++   TG  NI +VI  P 
Sbjct: 166 GLPVEPY-EWYLDLRRYGTVKHAGFGLGFERMIFFATGLENIRDVIPFPR 214


>gi|530408|emb|CAA83705.1| Asn-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 172

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 14/170 (8%)

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
            +        +   +  QA   G +    D  +           I   +       +  Y
Sbjct: 7   NSEFKVTTYTEAIEILKQAVANGHKFEVSDIEFGLDLGTEHERYICEQVNKAPT-FVTNY 65

Query: 242 PAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           P    A       D +     +L    I EL        +  +   R ++   +  ++  
Sbjct: 66  PKEIKAFYMKQNEDNKTVAAVDLLVPGIGELVGGSQREDNYEKLIKRCKEVNIDIDQL-- 123

Query: 301 ETYPIDEDF--LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 E +  L  L    +S+G  +GF+RL+M +TGA+NI +VI  P +
Sbjct: 124 ------EWYNNLR-LYGYYKSAGFGLGFERLIMYITGASNIRDVIPFPRT 166


>gi|297526478|ref|YP_003668502.1| tRNA synthetase class II (D K and N) [Staphylothermus hellenicus
           DSM 12710]
 gi|297255394|gb|ADI31603.1| tRNA synthetase class II (D K and N) [Staphylothermus hellenicus
           DSM 12710]
          Length = 478

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 96/331 (29%), Gaps = 44/331 (13%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAFSTELIIQDHIRKPLYLQTSPEF 84
           + +    R       FIE+    +  +            T+           Y  TS   
Sbjct: 177 SYVTRYSRGILYSKGFIELLPPMISVASDPGLRGAGKLKTKYYG------ETYELTSSVI 230

Query: 85  SCKKLLAAGEEKIFCFAHAWRNGE----QGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
             K+  AA  EK+F  A   R           H  EFT L+   A  S  + +      +
Sbjct: 231 MFKQASAAVYEKVFFTARNIREEPPENIWTGRHLSEFTQLDIEWA-MSGLEDVMRLAEEL 289

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
                      +     +     EP  +       RY                      +
Sbjct: 290 LYNVSKTIADKYMDLIYDIGERKEPVILKPPFPRIRY---------------------DE 328

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES-ALANIYPADPRFT 259
           A +   ++     W    +     +I      +    +  YPA            DPR+ 
Sbjct: 329 ALELAEKLGEPVEWGKELTHTAETRIAEYY--DSPVWIIGYPAISRGFYYLPDRDDPRYN 386

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT--EMP 317
             F L      L     E++D   + +R+ + ++  +K+    +     F+  +    +P
Sbjct: 387 LDFNL-----LLPEGYGEVIDGGAREYRYPQIVERIRKLGEPLHKYGW-FIELVKQGGIP 440

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            SSG  +G +RL   + G  ++      P  
Sbjct: 441 PSSGWGLGLERLTRYLAGHKHVGYATIFPKL 471


>gi|297201066|ref|ZP_06918463.1| aspartyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197712149|gb|EDY56183.1| aspartyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 587

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 56/163 (34%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG    +   +  I    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRAGHFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALETQDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    +EL +      +P      FE           ET  ++E F   L 
Sbjct: 465 LDILGWQYDIVCNGVELSSGAIRNHEPDIMLKAFEI-----AGYDRET--VEEKFAGMLR 517

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 518 AFRFGAPPHGGIAPGVDRIVMLLADEPNIRETISFPLNGNAQD 560



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 67/200 (33%), Gaps = 19/200 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + +S+R   V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHKNIMLRSSVIASIRSKMVALGFNEMATPILSATSPEG---ARDFVVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
                    +    E    ++F       +  S    I   EA  +Y +   DL   L+ 
Sbjct: 245 -----EQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLEL 299

Query: 189 PDQPDRHLLYLQAQQAGIRV 208
            D  D          AG  V
Sbjct: 300 VDITDVFEGSEFKAFAGKHV 319


>gi|170746938|ref|YP_001753198.1| aspartyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170653460|gb|ACB22515.1| aspartyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 625

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 71/216 (32%), Gaps = 32/216 (14%)

Query: 4   IPSQPWWN----RDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +     +   R R            ++KR  I  SLR    E  F E  +  L
Sbjct: 121 LPLPVFGDLEYPEETRLRYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPIL 180

Query: 50  Q-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP     ++            + +      +P+   +  + AG ++ F  A  +R+ 
Sbjct: 181 TASSPEGARDYLVPSRVHPGKFYALPQ------APQQFKQLTMIAGFDRYFQIAPCFRDE 234

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P EF  L+   +  + E + +    ++R         +F           E  
Sbjct: 235 DARADRSPGEFYQLDIEMSFVTQEDVFQAVEPVLRG--------VFEEFAEGKRVTKEFP 286

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
            IT A++  +Y  +D     +     D   L+ +  
Sbjct: 287 RITYADSMLKY-GVDKPDLRNPLIIADVTDLFARED 321



 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 33/175 (18%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK- 260
            + G+       +  I    + E  E    I+        P  +         D   ++ 
Sbjct: 433 DELGLCDKDQYAFCWITDFPMYEWSEEEKRIDFSHNPFSMPNIDREAFLALDLDALSSED 492

Query: 261 ---------------RFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIY 299
                          ++++    +EL +       P      F       + +++K    
Sbjct: 493 ENGANTKRILDIKAFQYDIVCNGVELSSGAIRNHRPDVMEKAFAIAGYGHEVLEQKFGGM 552

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                     L  L    P   GIA G DR+VML+    NI EV+  P +Q  ++
Sbjct: 553 ----------LNALRMGAPPHGGIAPGVDRIVMLLCNEPNIREVVLFPMNQRAED 597


>gi|119611366|gb|EAW90960.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Homo
           sapiens]
          Length = 608

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 187 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGKF---YSLP 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T AE  A Y   D   T       D
Sbjct: 301 LQY----------SWPNDKDPVVVPFPTMTFAEVLATY-GTDKPDTRFGMKIID 343



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E   +    L  L    P   GIA+G DRL+ LVTG+ +I +VI  P
Sbjct: 521 KEDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFP 568


>gi|166154757|ref|YP_001654875.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155632|ref|YP_001653887.1| aspartyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336031|ref|ZP_07224275.1| aspartyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|238687391|sp|B0B8B6|SYD_CHLT2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238687408|sp|B0B9Z5|SYD_CHLTB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|165930745|emb|CAP04242.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931620|emb|CAP07196.1| aspartyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 582

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 60/164 (36%), Gaps = 15/164 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           HL  L A++  +  +    +  I    L  K E  L           P  E         
Sbjct: 408 HLRRLIAKERQLYDSTQYNFVWITDFPLFAKEEGELC--PEHHPFTAPLDEDISLLDSDP 465

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFL 310
               +  ++L     E+ +    + +P  Q   F      +   K+K           F+
Sbjct: 466 FAVRSSSYDLVLNGYEIASGSQRIHNPDLQNKIFALLKLSQESVKEKFG--------FFI 517

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             L+   P   GIA+G DR++M++TGA  I EVI  P +Q   +
Sbjct: 518 DALSFGTPPHLGIALGLDRIMMVLTGAETIREVIAFPKTQKAGD 561



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 56/161 (34%), Gaps = 18/161 (11%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLY 77
             L+ R+ +  + R+Y  E  F E+ +  L + +P     ++            + +   
Sbjct: 142 DRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGARDYLVPSRIYPGNFYALPQ--- 198

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   +    E L     
Sbjct: 199 ---SPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQPEFTQIDMEMSFGGPEDLFPVVE 255

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++     V                +    +T  EA   Y 
Sbjct: 256 ELVTRLFAVKG----------IELKAPFLRMTYQEAKDSYG 286


>gi|94497625|ref|ZP_01304193.1| aspartyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94422842|gb|EAT07875.1| aspartyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 594

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 63/196 (32%), Gaps = 27/196 (13%)

Query: 3   QIPSQPWWN--RDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P     +   D   R      RR  L    +KR  I S +R       F E  +  L 
Sbjct: 111 PLPVAGEQDYPEDIRLRYRFLDLRRETLHANIVKRTKIISDMRRRMEGAGFTEYSTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRIH---PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E +      +I    E  +            P      
Sbjct: 225 PRADRLPGEFYQLDLEMSFVTQEDVWNTMEPVIAQVFEAFSD------GKPVTPAGSFPR 278

Query: 168 ITVAEAFARYANIDLG 183
           I  AEA  +Y +    
Sbjct: 279 IPHAEAMLKYGSDKPD 294



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 47/159 (29%), Gaps = 17/159 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +Q  +          I      E  E    I+        P                  +
Sbjct: 418 EQLDLIDKDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMPQGGLDALENQDPLTINAFQ 477

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL-T 314
           +++     E+ +       P      FE       +++E+                    
Sbjct: 478 YDMVCNGYEIASGSIRNQSPDLMVKAFELVGLSKADVEERFGG----------LYRAFQY 527

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   G+A G DR+VML+ GA N+ E+   P +Q  ++
Sbjct: 528 GAPPHGGMAAGVDRIVMLLCGAQNLREITLFPMNQRAED 566


>gi|83858510|ref|ZP_00952032.1| aspartyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83853333|gb|EAP91185.1| aspartyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 605

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 66/208 (31%), Gaps = 28/208 (13%)

Query: 3   QIPS--QPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P W+ +   + R            ++ R+ I  SLR   V+  F E  +  L 
Sbjct: 111 PLPVFGEPDWSEEVRLKHRYIDLRRESLHKRIVLRSKIIDSLRRRMVDEGFTEYQTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     +        Y L  +P+   + ++ +G ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRLH---PGHFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  +          +      V       F +    P      
Sbjct: 225 ARADRAPGEFYQLDMEMSFVT-------QDEVFGVIEPVLAGVFNEFADGREVPEGAFPR 277

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRH 195
           I  AEA  +Y +           +    
Sbjct: 278 IPYAEAMRKYGSDKPDLRNPIEMEAVTE 305



 Score = 76.2 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 5/156 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +   +   +  I    + E  + N  +         P  +         D   T  
Sbjct: 421 RELDLFEKNVFRFCWIVDFPMYEWDDENKKVEFSHNPFSMPQMDPEAFMALSKDDHETLL 480

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
                    +CN   EL     + HR +  ++  +        ++E F   L       P
Sbjct: 481 GLKAWQYDIVCNG-IELSSGAIRNHRPDVMLKAFEFAGYGADVVEEAFGGMLNAFRYGAP 539

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              GIA G DR+VM++    N+ EV+  P  Q  ++
Sbjct: 540 PHGGIAPGVDRIVMMLADQENLREVVMFPKDQQARD 575


>gi|331697356|ref|YP_004333595.1| aspartyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326952045|gb|AEA25742.1| aspartyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 594

 Score = 89.3 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 64/194 (32%), Gaps = 21/194 (10%)

Query: 11  NRDFHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +   R       L  R+      R    E  F+E+++ +L   +P      R F  
Sbjct: 122 LKHRYLDLRRTGPAAALRMRSEANRIARTVLHERDFVEVETPTLTRSTPEG---ARDFLV 178

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +         L  SP+   + L+ AG E+ +  A  +R+ +     QPEFT L+   
Sbjct: 179 PARL--RPGSWYALPQSPQLFKQLLMVAGTERYYQIARCYRDEDFRADRQPEFTQLDIEM 236

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +  S + +++    +                            +T AEA ARY   D   
Sbjct: 237 SFVSQDDVIELGEAVTAALWRELAGYEIP---------LPIPRMTYAEAMARY-GSDKPD 286

Query: 185 TLDNPDQPDRHLLY 198
                +  +    +
Sbjct: 287 LRFGIELTELTEYF 300



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 52/154 (33%), Gaps = 11/154 (7%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP----A 254
             A++ G+      ++  I    + E++  + G         +P        +       
Sbjct: 403 EIARRVGLVDESAWSFVWIVDAPMFERVRDDKGEEIGWTAVHHPFTSPNEDWLDRFEEAP 462

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN-ETYPIDEDFLACL 313
           D      +++ A   E+      +     Q+  F         +   E        L   
Sbjct: 463 DQALAYAYDIVANGNEIGGGSIRIHRSDVQQRVF-----ALLGMDEAEQQEKFGFLLDAF 517

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   GIA G+DR+ ML++GA ++ +VI  P
Sbjct: 518 QYGPPPHGGIAFGWDRICMLLSGAESLRDVIAFP 551


>gi|159125095|gb|EDP50212.1| aspartyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 680

 Score = 89.3 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 44/126 (34%), Gaps = 10/126 (7%)

Query: 227 EPNLGINCCTILDRYPAPESALANIYPA---DPRFT--KRFELYACNIELCNACDELLDP 281
           EP  G         +P      A        DP       ++L    +EL      + D 
Sbjct: 527 EPGQGGAAGISSTHHPFTAPKTAADVDQLLTDPTKAVADHYDLVVNGVELGGGSRRIHDA 586

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q       +Q K     E        L  L    P  +G+A+GFDRLV ++ G  ++ 
Sbjct: 587 AVQEFILRDILQMK----PERLADFSHLLDALRAGCPPHAGLALGFDRLVAVMLGKESVR 642

Query: 341 EVIWTP 346
           +VI  P
Sbjct: 643 DVIAFP 648



 Score = 79.7 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 18/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R  +++  RE   + +  F+EI++  L + +P      R F      +      
Sbjct: 210 RDALRFRAQVRNICREELEQCRPPFVEIETPLLFKSTPEG---AREFLVPTRRR---GLA 263

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  + E +M+ 
Sbjct: 264 YALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLDLEMSFATGEDVMRT 323

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
              IIR        +++S    +  P      +   +A +RY   D   T    +     
Sbjct: 324 VEGIIR--------RLWSSLMKDEAPSGPFRRMAYQDAMSRY-GSDKPDTRYGMEIFKID 374

Query: 196 LL 197
            L
Sbjct: 375 YL 376


>gi|121707085|ref|XP_001271727.1| aspartyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
 gi|119399875|gb|EAW10301.1| aspartyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
          Length = 678

 Score = 89.3 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 44/126 (34%), Gaps = 10/126 (7%)

Query: 227 EPNLGINCCTILDRYPAPESALANIYP---ADPRFT--KRFELYACNIELCNACDELLDP 281
           EP  G         +P      A        DP       ++L    +EL      + D 
Sbjct: 525 EPGQGGAAGISSTHHPFTAPKTAADVDLLLTDPTKAVADHYDLVVNGVELGGGSRRIHDA 584

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q       +Q +     E        L  L    P  +G+A+GFDRLV ++ G  ++ 
Sbjct: 585 AVQEFILRDILQMR----PERLADFSHLLDALRAGCPPHAGLALGFDRLVAVMLGKESVR 640

Query: 341 EVIWTP 346
           +VI  P
Sbjct: 641 DVIAFP 646



 Score = 76.2 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 18/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R  +++  +E   E +  F+EI++  L + +P      R F      +      
Sbjct: 208 RDALRFRAQVRNICKEELEECRPPFVEIETPLLFKSTPEGA---REFLVPTRRR---GLA 261

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  + E +M+ 
Sbjct: 262 YALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLDMEMSFSTGENVMRT 321

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
              IIR        +++S    +  P      +   EA +RY   D   T    +     
Sbjct: 322 VEGIIR--------RLWSSLMKDTAPSGPFRRMPYQEAMSRY-GSDKPDTRFGMEISRID 372

Query: 196 LL 197
            L
Sbjct: 373 YL 374


>gi|148261350|ref|YP_001235477.1| aspartyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|166225312|sp|A5G126|SYD_ACICJ RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146403031|gb|ABQ31558.1| aspartyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 595

 Score = 89.3 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 58/194 (29%), Gaps = 23/194 (11%)

Query: 15  HYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
            YR    RR  L    + R  + + LR       F E  +  L   SP      R F   
Sbjct: 127 RYRFLDLRREKLHRNIMLRANVIAWLRREMTARGFTEFTTPILTASSPEG---ARDFLVP 183

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYR 124
             +     +   L  +P+   + L+ AG ++ F  A  +R+        P EF  L++  
Sbjct: 184 SRVH--PGQFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEASRADRAPGEFYQLDFEM 241

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +  +         ++      V       F             I   EA  +Y   D   
Sbjct: 242 SFVT-------QEDVFATIEPVLGGLFREFGGGRGVTQWPFPRIAYDEALLKY-GSDKPD 293

Query: 185 TLDNPDQPDRHLLY 198
             +     D    +
Sbjct: 294 LRNPLLITDVTEAF 307



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 49/157 (31%), Gaps = 15/157 (9%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
             G+       +  I    + E+ E    I         P       N          ++
Sbjct: 418 DLGLIDGAKFEFCWIVDFPMYERDEETGQIVFSHNPFSMPQGGLEALNGQDPLTIKAFQY 477

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEM 316
           ++    +EL +       P      FE      +E++ +       +             
Sbjct: 478 DIVCNGVELSSGAIRNHRPDIMLRAFEIAGYGAEEVEARFGGMLNAF---------RYGA 528

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G A G DR+VML+    N+ EVI  P +Q  Q+
Sbjct: 529 PPHGGSAPGVDRMVMLLADEPNLREVIAFPLNQQGQD 565


>gi|145616054|ref|XP_001415131.1| hypothetical protein MGG_13512 [Magnaporthe oryzae 70-15]
 gi|145009821|gb|EDJ94477.1| hypothetical protein MGG_13512 [Magnaporthe oryzae 70-15]
          Length = 660

 Score = 89.3 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 92/275 (33%), Gaps = 24/275 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  +  R  ++SS+     +  F E+++  L + +P      R F               
Sbjct: 156 RERMRFRQHVKSSVTACLEKENFSEVETPILFKSTPEG---AREFLVPTRRP---GLAYA 209

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+AAG    F FA  +R+ +     QPEFT L+   +  + E +M+   
Sbjct: 210 LPQSPQQYKQTLMAAGFGGYFQFARCFRDEDLRADRQPEFTQLDMEMSFATGEDVMRTVE 269

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPF-----SEPEYITVAEAFARYANIDLGT-------- 184
            +I+              + +            +  +  E+   + +ID G         
Sbjct: 270 MLIKQLYNNVATNFVQVVDTDGWHPVSRKRQCGKRGSSEESVRDFPSIDDGPLPRMSYQD 329

Query: 185 --TLDNPDQPDRHLLYLQAQ-QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
             +L   D+PD  +     + +  +        S+I + I+        G +       +
Sbjct: 330 VMSLYGSDKPDLRIPGQIERVEHVLPAQFVSMISEIDNPIIDCWRCTLDGGSPRKYQKFF 389

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACD 276
               S L      +P   +   L   + +  N   
Sbjct: 390 SKILSNLPLGLNRNPDG-EPVILVHDSSKPLNGFS 423



 Score = 88.9 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 47/144 (32%), Gaps = 12/144 (8%)

Query: 217 IFSRILIEKIEPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIEL 271
           +F+       +P  G +       +P       +                ++L     EL
Sbjct: 493 LFTPANEGTTDPGQGGSAGFSSTHHPFTAPLTSQDFELLATDPLRAKADHYDLVLNGCEL 552

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLV 330
                 +     Q   F   ++                L  L    P  +G A+GFDRLV
Sbjct: 553 GGGSRRIHVAHVQEFVFRSILRMTDTGV--AQF--RHLLEALRAGCPPHAGFALGFDRLV 608

Query: 331 MLVTGANNINEVIWTPFSQSNQEE 354
            +++G  ++ +VI  P  +S + E
Sbjct: 609 AMLSGTGSVRDVIAFP--KSMKGE 630


>gi|125974053|ref|YP_001037963.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004470|ref|ZP_05429450.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|125714278|gb|ABN52770.1| aspartyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991611|gb|EEU01713.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316941300|gb|ADU75334.1| aspartyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 581

 Score = 89.3 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 75/221 (33%), Gaps = 18/221 (8%)

Query: 13  DFHYRR-RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQ 69
           D   R+ +  +L R+ + S LR+   E  F+EI +  L   SP     +I          
Sbjct: 130 DLRNRKVKDNILFRSQVISFLRQKMTEMGFVEIQTPILSASSPEGARDYIVPSRKHKGKF 189

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHES 128
             + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L++  +  +
Sbjct: 190 YALPQ------APQIYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMSFAT 243

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--NIDLGTTL 186
            E + +    ++    +    + +          +     +  +A   +     DL   L
Sbjct: 244 QEDVFRVGEEVLTATFKKFAPEGYE------ITEAPFPVFSYKQAMLEFGTDKPDLRNPL 297

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              D  D              V      +D+      + +E
Sbjct: 298 RIIDVTDFFQRCAFKPFHNKTVRAIKVHADMSKGFHEKLLE 338



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           +     ++  I   +   +  +    + E  E    I         P       N     
Sbjct: 404 IRNELGKRLDICEKNAYRFCYVNDFPMYEMDEETGKIEFTHNPFSMPQGGLEALNTKGPL 463

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL 313
                ++++    +EL +      D       FE         Y+E     +        
Sbjct: 464 DILAYQYDIVCNGVELSSGAVRNHDLDIMVKAFEI------AGYDEETLKKKFGALYNAF 517

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P  +G+A G +R++ML+    NI EV+  P + + Q+
Sbjct: 518 QYGAPPHAGMAPGIERMIMLLRNEENIREVVAFPMNSNAQD 558


>gi|70994380|ref|XP_751992.1| aspartyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66849626|gb|EAL89954.1| aspartyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
          Length = 680

 Score = 89.3 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 44/126 (34%), Gaps = 10/126 (7%)

Query: 227 EPNLGINCCTILDRYPAPESALANIYPA---DPRFT--KRFELYACNIELCNACDELLDP 281
           EP  G         +P      A        DP       ++L    +EL      + D 
Sbjct: 527 EPGQGGAAGISSTHHPFTAPKTAADVDQLLTDPTKAVADHYDLVVNGVELGGGSRRIHDA 586

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q       +Q K     E        L  L    P  +G+A+GFDRLV ++ G  ++ 
Sbjct: 587 AVQEFILRDILQMK----PERLADFSHLLDALRAGCPPHAGLALGFDRLVAVMLGKESVR 642

Query: 341 EVIWTP 346
           +VI  P
Sbjct: 643 DVIAFP 648



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 18/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R  +++  RE   + +  F+EI++  L + +P      R F      +      
Sbjct: 210 RDALRFRAQVRNICREELEQCRPPFVEIETPLLFKSTPEG---AREFLVPTRRR---GLA 263

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  + E +M+ 
Sbjct: 264 YALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLDLEMSFATGEDVMRT 323

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
              IIR        +++S    +  P      +   +A +RY   D   T    +     
Sbjct: 324 VEGIIR--------RLWSSLMKDEAPSGPFRRMPYQDAMSRY-GSDKPDTRYGMEIFKID 374

Query: 196 LL 197
            L
Sbjct: 375 YL 376


>gi|162148016|ref|YP_001602477.1| aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786593|emb|CAP56175.1| Aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 613

 Score = 89.3 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 55/173 (31%), Gaps = 16/173 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R  + +SLR    +  F+E  +  L   SP      R F     +    
Sbjct: 148 RRDKVHRNMMLRAQVIASLRRRMTDQGFVEFQTPILTASSPEG---ARDFLVPARMH--- 201

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   +  + AG ++ F  A  +R+        P EF  L++  A  + E
Sbjct: 202 PGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFEMAFATQE 261

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +      ++                      +  E I  A A   Y +    
Sbjct: 262 DVFATLEPVMEGVFREFGGGR-------TVSAAPFERIPYATAMKLYGSDKPD 307



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 49/158 (31%), Gaps = 11/158 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A +  +       +  I    + E+ E    I+        P       N         
Sbjct: 429 IATELDLIEQDSFRFCWITDFPMYERNEETGQIDFSHNPFSMPQGGLEALNGQDPLTITA 488

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TE 315
            ++++    +EL +       P      FE               ++  F   L      
Sbjct: 489 YQYDIVCNGVELSSGAIRNHRPDVMIRAFE-------LAGYPASEVEARFGGMLNAFRYG 541

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 542 APPHGGSAPGVDRIVMLLADEPNIREVILFPLNQQGED 579


>gi|209542632|ref|YP_002274861.1| aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530309|gb|ACI50246.1| aspartyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 599

 Score = 89.3 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 55/173 (31%), Gaps = 16/173 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R  + +SLR    +  F+E  +  L   SP      R F     +    
Sbjct: 134 RRDKVHRNMMLRAQVIASLRRRMTDQGFVEFQTPILTASSPEG---ARDFLVPARMH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   +  + AG ++ F  A  +R+        P EF  L++  A  + E
Sbjct: 188 PGKFYALPQAPQQFKQLAMVAGFDRYFQIAPCFRDEAARADRSPGEFYQLDFEMAFATQE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +      ++                      +  E I  A A   Y +    
Sbjct: 248 DVFATLEPVMEGVFREFGGGR-------TVSAAPFERIPYATAMKLYGSDKPD 293



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 49/158 (31%), Gaps = 11/158 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A +  +       +  I    + E+ E    I+        P       N         
Sbjct: 415 IATELDLIEQDSFRFCWITDFPMYERNEETGQIDFSHNPFSMPQGGLEALNGQDPLTITA 474

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TE 315
            ++++    +EL +       P      FE               ++  F   L      
Sbjct: 475 YQYDIVCNGVELSSGAIRNHRPDVMIRAFE-------LAGYPASEVEARFGGMLNAFRYG 527

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 528 APPHGGSAPGVDRIVMLLADEPNIREVILFPLNQQGED 565


>gi|114569808|ref|YP_756488.1| aspartyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122316203|sp|Q0AQ87|SYD_MARMM RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114340270|gb|ABI65550.1| aspartyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 605

 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 64/196 (32%), Gaps = 28/196 (14%)

Query: 3   QIPS--QPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P W+ +   + R            ++ R+ I  SLR   V+  F+E  +  L 
Sbjct: 111 PLPVFGEPDWSEEVRLKHRYIDLRRESLHKRIVLRSKIIDSLRRRMVDENFVEYQTPILT 170

Query: 51  -YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      +            + +      +P+   + ++ +G ++ F  A  +R+ +
Sbjct: 171 ASSPEGARDFLVPSRVHPGKFYALPQ------APQQFKQLIMVSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  +         ++      V       F +    P      
Sbjct: 225 ARADRAPGEFYQLDMEMSFAT-------QQDVFDVIEPVMKGLFDEFADGRTVPDEPFVQ 277

Query: 168 ITVAEAFARYANIDLG 183
           I   +A + Y +    
Sbjct: 278 IAYKDAMSWYGSDKPD 293



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 4/155 (2%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +  +       +  I    + E  E N  I+        P  +        AD       
Sbjct: 422 ELDLCEKDTFRFCWIVDFPMYEWDEDNKKIDFSHNPFSMPQIDPDDFLKLDADTDADTLL 481

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQ 318
            L A   ++     EL     + HR +  ++       +   ++E+F   L       P 
Sbjct: 482 ALKAYQYDIVCNGVELSSGAVRNHRPDVMLKAFAFAGYDAATVEEEFGGMLNAFRYGAPP 541

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            +G+A G DR++ML+ G  N+ EV+  P  Q  ++
Sbjct: 542 HAGVAPGVDRMIMLLAGVENLREVVMFPKDQQARD 576


>gi|114565518|ref|XP_001149903.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 1
           [Pan troglodytes]
          Length = 548

 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 187 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGKF---YSLP 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T AEA A Y   D   T       D
Sbjct: 301 LQY----------SWPNDKDPVVVPFPTMTFAEALATY-GTDKPDTRFGMKIID 343


>gi|304321254|ref|YP_003854897.1| aspartyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303300156|gb|ADM09755.1| aspartyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 640

 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 79/220 (35%), Gaps = 27/220 (12%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   R      RR  +    + R+ + S LR+   + +F E  +  L 
Sbjct: 149 PLPVFGEPDYPEDIRMRHRYLDLRRETMHKNIVLRSRVISQLRKGMEQREFTEYQTPILT 208

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             SP      R F     +     K   L  +P+   + ++ +G ++ F  A  +R+ + 
Sbjct: 209 ASSPEG---ARDFLVPSRLH--PGKFFALPQAPQIFKQLIMVSGFDRYFQIAPCFRDEDA 263

Query: 110 G-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                  EF  L+   +    + +      +I  A  +             +P+ E   I
Sbjct: 264 RADRSAGEFYQLDLEMSFVEQQDVFDATAPVIHEAFALFAGD------RRVDPYKEWPQI 317

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
             AE+  +Y N      L  P   D  ++    + +G ++
Sbjct: 318 PYAESLLKYGN--DKPDLRLPSSLDMQVVTEHFKGSGFKI 355



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 53/177 (29%), Gaps = 15/177 (8%)

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA- 243
            +++ +           ++ G        ++ I    + E  E N  +         P  
Sbjct: 440 KVESFEAIAGRARVQIGRELGHLDEDRFAFAWIVDFPMYEWDEENKKVEFGHNPFSMPKG 499

Query: 244 ---PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
                               +++L     EL +       P      F          Y 
Sbjct: 500 GLSALEKATTPEAQLALKANQYDLVCNGYELGSGAIRNHLPEVMYRAFAI------AGYG 553

Query: 301 ETYPIDEDF---LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               +++ F   L       P   G A G DR+VML+ G  NI EV   P +Q+ ++
Sbjct: 554 -ADVVEDKFGGMLNAFRYGAPPHGGAAFGVDRIVMLLAGVENIREVTMFPLTQNAED 609


>gi|290958925|ref|YP_003490107.1| aspartyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260648451|emb|CBG71562.1| aspartyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 587

 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 55/163 (33%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG        +  I    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRAGHFEEGVFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLEALETQDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    +EL +      +P      FE           ET  ++E F   L 
Sbjct: 465 LDILGWQYDIVCNGVELSSGAIRNHEPDIMLKAFEI-----AGYDRET--VEEQFAGMLR 517

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 518 AFRFGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 70/224 (31%), Gaps = 23/224 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R  + S++R       F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILSATSPEG---ARDFVVPSRLN--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            +   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
                   +    E    ++F       +  S    I   E+  +Y +   DL   L+  
Sbjct: 245 ----EQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFRESMLKYGSDKPDLRAQLELV 300

Query: 190 DQPDRHLLYLQAQQAGIRVAH------DDTWSDIFSRILIEKIE 227
           D  D          AG  V               F ++    IE
Sbjct: 301 DITDVFEGSEFKAFAGKHVRALAVPDVSAQPRKFFDQLGEYAIE 344


>gi|67968455|dbj|BAE00589.1| unnamed protein product [Macaca fascicularis]
          Length = 379

 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 187 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGKF---YSLP 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T  EA A Y   D   T       D
Sbjct: 301 LQY----------SWPNDKDPVVVPFPTVTFTEALATY-GTDKPDTRFGMKIID 343


>gi|326388938|ref|ZP_08210520.1| aspartyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326206538|gb|EGD57373.1| aspartyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 593

 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 62/180 (34%), Gaps = 23/180 (12%)

Query: 15  HYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
            YR    RR  L    +KR  I S++R       F E  +  L   SP      R F   
Sbjct: 127 RYRFLDLRRETLHANIVKRTKIISAMRRKMEGVGFTEYSTPILTASSPEG---ARDFLVP 183

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             I        Y L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L+  
Sbjct: 184 SRIH---GGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E++ +    +I    E   +        +         I   EA  +Y +    
Sbjct: 241 MSFVTQEEIWETMEPVIGSIFEDFAEGQAVTPIGS------FPRIPYDEAMLKYGSDKPD 294



 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 21/161 (13%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR--FT 259
           +Q G+          I      E  E    +         P  +  +  +  ADP     
Sbjct: 418 EQLGLIEQGAFRLCWIVDFPFYEWDEDEKKVEFSHNPFSMP--QGGIDALNNADPLTIKA 475

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL 313
            +++L     E+ +       P      FE       +++E+                  
Sbjct: 476 FQYDLVCNGYEIASGSIRNQSPETMVRAFEIVGLTKADVEERFGG----------LYRAF 525

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   G+A G DR+VML+ GA N+ E+   P +Q  ++
Sbjct: 526 QYGAPPHGGMAAGVDRIVMLLCGAQNLREISLFPMNQRAED 566


>gi|114565512|ref|XP_001150025.1| PREDICTED: aspartyl-tRNA synthetase 2 (mitochondrial) isoform 3
           [Pan troglodytes]
          Length = 608

 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 187 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGKF---YSLP 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T AEA A Y   D   T       D
Sbjct: 301 LQY----------SWPNDKDPVVVPFPTMTFAEALATY-GTDKPDTRFGMKIID 343



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E   +    L  L    P   GIA+G DRL+ LVTG+ +I +VI  P
Sbjct: 521 KEDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSRSIRDVIAFP 568


>gi|282863865|ref|ZP_06272923.1| aspartyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282561566|gb|EFB67110.1| aspartyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 605

 Score = 89.3 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 5/160 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A+++G        +  +    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRSGHFEEGVFRFCWVVDFPMYEKDEETGRIDFSHNPFSMPQGGLEDLETKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    IEL +      +P      FE    +++ + +E   +    L    
Sbjct: 465 LDILAWQYDIVCNGIELSSGAIRNHEPELMIKAFEIAGYDRETVEHEFAGM----LRAFR 520

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 521 LGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 70/226 (30%), Gaps = 25/226 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + +S+R   V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEG---ARDFVVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG-----TT 185
                    +    E    ++F       +  S    I   E+  +Y N           
Sbjct: 245 -----EQEDVFQPIEKLMTELFEEFGNGRHVTSPFPRIPFRESMLKYGNDKPDLRAQLEL 299

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWS---DIFSRILIEKIEP 228
           +D  D          A +    +   DT       F  +    +E 
Sbjct: 300 VDISDVFADSGFKAFAGKHVRALPVPDTAGQSRKFFDGLGEYAVEH 345


>gi|281418205|ref|ZP_06249225.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281409607|gb|EFB39865.1| aspartyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 581

 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 75/221 (33%), Gaps = 18/221 (8%)

Query: 13  DFHYRR-RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQ 69
           D   R+ +  +L R+ + S LR+   E  F+EI +  L   SP     +I          
Sbjct: 130 DLRNRKVKDNILFRSQVISFLRQKMTEMGFVEIQTPILSASSPEGARDYIVPSRKHKGKF 189

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHES 128
             + +      +P+   + L+ +G +K F  A  +R+ +      P EF  L++  +  +
Sbjct: 190 YALPQ------APQIYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMSFAT 243

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA--NIDLGTTL 186
            E + +    ++    +    + +          +     +  +A   +     DL   L
Sbjct: 244 QEDVFRVGEEVLTATFKKFAPEGYE------ITEAPFPVFSYKQAMLEFGTDKPDLRNPL 297

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
              D  D              V      +D+      + +E
Sbjct: 298 RIIDVTDFFQRCAFKPFHNKTVRAIKVHADMSKGFHEKLLE 338



 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
           +     ++  I   +   +  +    + E  E    I         P       N     
Sbjct: 404 IRNELGKRLDICEKNAYRFCYVNDFPMYEMDEETGKIEFTHNPFSMPQGGLEALNTKDPL 463

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL 313
                ++++    +EL +      D       FE         Y+E     +        
Sbjct: 464 DILAYQYDIVCNGVELSSGAVRNHDLDIMVKAFEI------AGYDEETLKKKFGALYNAF 517

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P  +G+A G +R++ML+    NI EV+  P + + Q+
Sbjct: 518 QYGAPPHAGMAPGIERMIMLLRNEENIREVVAFPMNSNAQD 558


>gi|327350748|gb|EGE79605.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 750

 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 14/135 (10%)

Query: 227 EPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P             +          ++L    +EL      +   
Sbjct: 571 EPGQGGAAGIASTHHPFTAPLRESDISLLLTDPTKVIADHYDLVLNGVELGGGSRRIHSA 630

Query: 282 IEQRHRFEKEMQE-KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
             Q       ++   +++ +  +      L  L    P  +GIA+GFDRLV ++ G  ++
Sbjct: 631 AVQEFILRDILKMPAERLADFAH-----LLEALRAGCPPHAGIALGFDRLVAVMLGKESV 685

Query: 340 NEVIWTPFSQSNQEE 354
            +VI  P  +S + E
Sbjct: 686 RDVIAFP--KSGKGE 698



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 17/181 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R   ++ LRE   E Q  FIEI++  L + +P      R F      +      
Sbjct: 255 RDALRFRARARNVLREALEECQLPFIEIETPLLFKSTPEG---AREFLVPTRRR---GMA 308

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 309 YALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLDLEMSFAT------- 361

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E A +K++S    +  P    +  T  +A A++ +      +    +   H
Sbjct: 362 -GEDVITVIEAAVKKLWSSLMTHSLPSESFQRTTYEDAMAKFGSDKPDVRIGMEIKRIEH 420

Query: 196 L 196
           +
Sbjct: 421 M 421


>gi|261206066|ref|XP_002627770.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239592829|gb|EEQ75410.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 803

 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 14/135 (10%)

Query: 227 EPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P             +          ++L    +EL      +   
Sbjct: 624 EPGQGGAAGIASTHHPFTAPLRESDISLLLTDPTKVIADHYDLVLNGVELGGGSRRIHSA 683

Query: 282 IEQRHRFEKEMQE-KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
             Q       ++   +++ +  +      L  L    P  +GIA+GFDRLV ++ G  ++
Sbjct: 684 AVQEFILRDILKMPAERLADFAH-----LLEALRAGCPPHAGIALGFDRLVAVMLGKESV 738

Query: 340 NEVIWTPFSQSNQEE 354
            +VI  P  +S + E
Sbjct: 739 RDVIAFP--KSGKGE 751



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 17/181 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R   ++ LRE   E Q  FIEI++  L + +P      R F      +      
Sbjct: 308 RDALRFRARARNVLREALEECQLPFIEIETPLLFKSTPEG---AREFLVPTRRR---GMA 361

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 362 YALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLDLEMSFAT------- 414

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E A +K++S    +  P    +  T  +A A++ +      +    +   H
Sbjct: 415 -GEDVITVIEAAVKKLWSSLMTHSLPSESFQRTTYEDAMAKFGSDKPDVRIGMEIKRIEH 473

Query: 196 L 196
           +
Sbjct: 474 M 474


>gi|145614218|ref|XP_364052.2| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145021159|gb|EDK05288.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 289

 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 88/287 (30%), Gaps = 29/287 (10%)

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
            L   D+  +  YL  S +   + +L +    ++C   ++R  +     H  E+T +E  
Sbjct: 21  TLFKFDYYGEAAYLTQSSQLYLETVLPS-LGNVYCIEKSFRAEKSLTRRHLSEYTHVEGE 79

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN-IDL 182
               ++E L+     +I    +         ++V      +    +      +Y++ ID 
Sbjct: 80  LDGINFEDLLVHIEEVICRVVDSVLDNPEVARHVKALN-PDFVKPSRPFMRMKYSDAIDW 138

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
               D P   +                H   + D  +     ++     IN   +L  +P
Sbjct: 139 LNAQDPPILNEE--------------GHPHVFGDDIAEAAERRM--TDIINRPILLTHFP 182

Query: 243 APE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
               +      P D R T+  ++    +         ++  E     +     K++  + 
Sbjct: 183 VEIKAFYMKKDPNDLRVTESVDVLMPGVGEIVGGSMRMEGYE-----DLMAAFKREGIDP 237

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  +L           G  +G +R +  +   + +      P 
Sbjct: 238 APYY--WYLDQRKYGTSPHGGYGLGLERFLAWIAKQHTVRTCCLYPR 282


>gi|126662943|ref|ZP_01733941.1| aspartate--tRNA ligase [Flavobacteria bacterium BAL38]
 gi|126624601|gb|EAZ95291.1| aspartate--tRNA ligase [Flavobacteria bacterium BAL38]
          Length = 581

 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 19/176 (10%)

Query: 17  RRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR P    LL R+ +   +R+Y  +  F ++++  L   +P      R F     + +  
Sbjct: 133 RRNPVKNNLLFRHKVSMEVRKYLSDQGFCDVETPYLIKSTPEG---ARDFVVPSRMNE-- 187

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
            +   L  SP+   + L+  G +K F     +R+ +     QPEFT ++   A    E +
Sbjct: 188 GQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMAFVEQEDI 247

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           +     + R   +                  +   IT   A   Y N       + 
Sbjct: 248 LNMFEGLTRHLLKEIKGVEVE----------KFPRITYDYAMKTYGNDKPDIRFEM 293



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 49/153 (32%), Gaps = 5/153 (3%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L    A + G+R + +     +    L+E  E +   +        P PE         
Sbjct: 404 ALRMEVATRLGLRKSDEFAPLWVVDFPLLEWDEESGRYHAMHHPFTSPKPEDMALIETEP 463

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                  +++     E+      + D   Q   F+     K+    E        ++   
Sbjct: 464 GKVRANAYDMVLNGNEIGGGSIRIHDRDLQSRMFDLLGFSKE----EAQAQFGFLMSAFE 519

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              P   G+A G DRLV ++ G   I + I  P
Sbjct: 520 FGAPPHGGLAFGLDRLVSILGGQETIRDFIAFP 552


>gi|227547110|ref|ZP_03977159.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|227212411|gb|EEI80301.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 55813]
          Length = 41

 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 26/39 (66%)

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             M  + G+ +G DRLVML+TG+++I +V+  P+ +  Q
Sbjct: 3   YGMAPTGGLGIGVDRLVMLLTGSSSIRDVLLFPYMRPEQ 41


>gi|332020819|gb|EGI61217.1| Aspartyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
          Length = 651

 Score = 88.9 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 9/185 (4%)

Query: 22  LLKRNMIQSSLREYF-VENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +RE+   E  F++I++ +L + +PG       F               L 
Sbjct: 207 LRMRSSLIMRMREFLIHECSFVDIETPTLFKSTPGGAQE---FVVPTRQPGIF---YSLV 260

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT L+   +    + +M    N+
Sbjct: 261 QSPQQFKQLLMIGGLDRYFQIARCYRDETVRHDRQPEFTQLDIEMSFVDRDGVMNLIENL 320

Query: 140 IRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +     E        F+ +      E       +    Y   DL    D P   +   L 
Sbjct: 321 LMYSWPEELGSIKVPFKLITYKDAMELYGTDKPDLRISYQIKDLTHMFDLPVLKETMKLE 380

Query: 199 LQAQQ 203
              Q+
Sbjct: 381 DDKQK 385



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 44/158 (27%), Gaps = 19/158 (12%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           R       +  G ++   +      +   +   E  L  +       +P     L     
Sbjct: 477 RTEFTNILEAKGEQIRSSEAELVWITDFPLFTFEETLESSHHPFTQPHPEDMKYLTT--D 534

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE----DF 309
                   ++L     E+      + D   QR                   IDE      
Sbjct: 535 PLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILGMLN------------IDETKLSHM 582

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L  L    P   GIA+G DR V ++    +I  VI  P
Sbjct: 583 LEALTYGAPPHGGIAIGLDRFVCVLCNEKSIKNVIAFP 620


>gi|86357135|ref|YP_469027.1| aspartyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86281237|gb|ABC90300.1| aspartyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 602

 Score = 88.9 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 64/196 (32%), Gaps = 29/196 (14%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    +KR  + S++R       F E  +  L 
Sbjct: 117 PLPVFGEPEYPEDVRLKYRFLDLRRETLHKNIVKRTQVISAMRREMGSAGFTEYTTPILT 176

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 177 ASSPEG---ARDFLVPSRIH---PGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 230

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E +                 K+F           E   
Sbjct: 231 PRADRLPGEFYQLDLEMSFVTQEDVWNTMG--------PLMTKVFEEFAEGKPVTKEWPR 282

Query: 168 ITVAEAFARYANIDLG 183
           I   EA  +Y +    
Sbjct: 283 IPYDEAIRKYGSDKPD 298



 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 47/163 (28%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +          I      E  +    ++        P            
Sbjct: 419 EARTKAGEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLDALQNQDP 478

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 +++      E+ +       P       E  +   +K+      +++ F     
Sbjct: 479 LTIKAFQYDAVCNGFEIASGSIRNQSP-------ETMVAAFEKVGLSQQDVEDRFGGLYR 531

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G A G DR++ML+ GA N+ E+   P +Q  Q+
Sbjct: 532 AFQYGAPPHGGAAFGIDRIIMLLVGAKNLREISLFPMNQQAQD 574


>gi|167646519|ref|YP_001684182.1| aspartyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189082089|sp|B0SWQ6|SYD_CAUSK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|167348949|gb|ABZ71684.1| aspartyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 609

 Score = 88.9 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 23/190 (12%)

Query: 11  NRDFHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            +  +   RR  L    + R+ +  S+R       F E  +  L   SP      R F  
Sbjct: 126 LKHRYLDLRRETLHKNIVLRSRVIQSIRSRMFAQGFNEFQTPILTASSPEG---ARDFLV 182

Query: 65  ELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
              +        Y L  +P+   + L+ +G ++ F  A  +R+ +       EF  L+  
Sbjct: 183 PSRLH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDLRADRSLEFYQLDVE 239

Query: 124 RAHESYEQLMKDCMNIIRCAAEVA----------NQKIFSFQNVNCNPFSEPEYITVAEA 173
            +  + E +      ++    E                F+            E +T A++
Sbjct: 240 MSFVTQEDVFAAIEPVMHGVFEEFSAGKPVSPIDGVHTFTNDFGATLEHRGFERLTYAQS 299

Query: 174 FARYANIDLG 183
            A Y +    
Sbjct: 300 MAWYGSDKPD 309



 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 48/155 (30%), Gaps = 11/155 (7%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +  +       +  I    + E  E    ++        P                  ++
Sbjct: 435 ELKLVDEEQFKFCWIVDFPMFEWNEDEKKVDFSHNPFSMPQGGLEALETQDPLTIRAYQY 494

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQ 318
           ++     ELC+       P      FE         Y     ++E F   L       P 
Sbjct: 495 DIVCNGYELCSGAIRNHKPEIMLKAFEV------AGYG-AEVVEEQFGGMLNAFRYGAPP 547

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G+A G DR+VML+     I EVI  P +Q  Q+
Sbjct: 548 HGGLAPGIDRIVMLLAEQVAIREVIAFPLNQQGQD 582


>gi|326477678|gb|EGE01688.1| aspartyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 685

 Score = 88.9 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 83/237 (35%), Gaps = 21/237 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R    ++LR    E +  F+E+++  L + +P      R F      Q      
Sbjct: 214 RQSLAFRAKANAALRRALEECEPPFLEVETPILFKSTPEG---AREFLVPTRNQ---GLA 267

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 268 YALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQPEFTQLDMEMSFAT------- 320

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E   +K+++              ++  EA   Y +    T  D   +  R 
Sbjct: 321 -AEDVITTTETLVKKLWASVMPEPLGPEPFPRMSYYEAMGSYGSDKPDTRFDM--KLHRV 377

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
             YL A   G   + +    + F        E ++ +    +    P  +  L N  
Sbjct: 378 EQYLPADFIGKISSLNSPVVEAFIVKGNGHPEESMRVLRSFMNT--PEAKPFLDNPD 432



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 41/126 (32%), Gaps = 10/126 (7%)

Query: 227 EPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P       + A   +          ++L    +EL      +   
Sbjct: 530 EPGQGGTAGIASTHHPFTAPRTAKDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSA 589

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q       ++                L CL    P  +GIA+GFDRL+ ++ G  ++ 
Sbjct: 590 AVQEFVLRDILKV----PPSRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVR 645

Query: 341 EVIWTP 346
            VI  P
Sbjct: 646 NVIAFP 651


>gi|307329472|ref|ZP_07608633.1| aspartyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306884881|gb|EFN15906.1| aspartyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 620

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 16/188 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + S++R+      F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRSAVISAIRQKMTAQGFNELATPILSATSPEG---ARDFLVPSRLH--A 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                   +    E    ++F       +  S    I   EA  +Y   D        + 
Sbjct: 245 ----EQEDVFGVIEKVMTELFEEFGGGRHVTSPFPRIPFREAMLKY-GSDKPDLRAQLEL 299

Query: 192 PDRHLLYL 199
            D   ++ 
Sbjct: 300 RDVSHIFE 307



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++ G        +  I    + E+ E    I         P            
Sbjct: 405 AVRVEAAKRTGHFEEGVFRFCWIVDFPMFERNEDTGQIEFSHNPFSMPQGGLEALETKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF-----EKEMQEKKKIYNETYPIDEDF 309
                 ++++    +EL +      +P      F     +++  E++             
Sbjct: 465 LDILAWQYDIVCNGVELSSGAIRNHEPDVMYKAFALAGYDRDEVEREFGGM--------- 515

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L       P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 516 LRAFHFGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560


>gi|256001946|gb|ACU52297.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
          Length = 192

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 9/173 (5%)

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
                        +  +    +T+ E+ + Y  +D+    D+  +          ++  +
Sbjct: 26  VQYSHLKSGPQVVDFKAPWIRMTMKESISVYGGVDVDLHADHELRKILETQTSLPEKMYV 85

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELY 265
             +  +  + +F  ++ +K      +     +  +P   + L     + D    +RFE +
Sbjct: 86  HASRGELIALLFDELVCDK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESF 139

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEM 316
               ELCNA  EL DP++QR   E++M++K     +E +PIDE+FL  L   M
Sbjct: 140 CLGKELCNAYSELNDPLQQRKLLEEQMRKKALNPDSEYHPIDEEFLEALCQGM 192


>gi|126725152|ref|ZP_01740995.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126706316|gb|EBA05406.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 644

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 67/195 (34%), Gaps = 9/195 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  +L R+ + +S+R+   +  F E  +  +   SP      R F     +    
Sbjct: 123 RREKLQNNMLLRSNVVASMRKRMWDQGFNEFQTPIITASSPEG---ARDFLVPSRLH--- 176

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +  + +
Sbjct: 177 PGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVTQQ 236

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      +I    E   +     Q      +++ E     +       I +    ++  
Sbjct: 237 DVFDTIQPVIGGVFEEFGKGRKVDQTWEQISYADSELWYGTDKPDLRNPIKMQVVSEHFA 296

Query: 191 QPDRHLLYLQAQQAG 205
                +     +Q G
Sbjct: 297 GSGFAIFAKLLEQEG 311



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 16/163 (9%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
              +Q G+   +   ++ I    + E  E +  ++        P       N  P     
Sbjct: 468 EIGEQLGLVDENRFAFAWIVDFPMYEVDEESGKVDFSHNPFSMPQGGLEALNQDPLKV-L 526

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLAC 312
             +++L     EL +       P      FE       E++++     + +         
Sbjct: 527 GYQYDLACNGYELISGAIRNHQPEIMFKAFELAGYGNDEVKKRFGGMVKAFT-------- 578

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEEI 355
               P   G A G DR+VML+    NI EVI  P +Q  ++ +
Sbjct: 579 -YGAPPHGGCAAGIDRIVMLLADEANIREVIMFPMNQRAEDSM 620


>gi|47207856|emb|CAF90609.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 323

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 67/179 (37%), Gaps = 19/179 (10%)

Query: 17  RRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRK 74
           R +  L  R+ +   +RE+    + F+++++ +L + +PG     + F            
Sbjct: 102 RMQRNLRLRSQLVMKMREFLCNLHGFVDVETPTLFKRTPGG---AKEFVVPSREPGRF-- 156

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
              L  SP+   + L+ AG ++ F  A  +R+       QPEFT ++   +      +M 
Sbjct: 157 -YSLPQSPQQFKQLLMVAGIDRYFQIARCYRDEGSKPDRQPEFTQVDIEMSFVEQTGIMS 215

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
               +++           S+ +         + +T  EA   Y  +D   T       D
Sbjct: 216 LVEALLQH----------SWPDQLGPLQLPFQTMTFEEAMRDY-GVDKPDTRFAMKVSD 263


>gi|241802229|ref|XP_002414521.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215508732|gb|EEC18186.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 397

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 78/298 (26%), Gaps = 37/298 (12%)

Query: 15  HYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFSTEL 66
           H R R       L  R+    ++   F    F  + +  +  +    G +     FS + 
Sbjct: 96  HLRPRLSQEAALLRVRSAALVAVHSAFQAEGFFHVHTPVITSNDCEGGGDV----FSVKA 151

Query: 67  IIQD------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
             +                 P +L  S +    +  A    +++  +  +R        H
Sbjct: 152 AEESKGTKEDAAAREHFFGGPAFLTVSGQLHL-EAAAMSLSRVYTVSPTFRAENCNTRRH 210

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A       + D    +            SF ++  +   + + +T    
Sbjct: 211 LCEFCMVEAEEAFLDSLDALMDRTESLVKR---------SFNHILGSAEQDVDLVTREAP 261

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
                 +                +           +H   W D       E I  + G N
Sbjct: 262 AGHVKTVAAALDEPFLRLTYNECIGYLKAADNRAFSHSVQWGDNLKTEHEEFIVKHCG-N 320

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEK 290
               +  +PA          +     + F+ L     ELC            + R E 
Sbjct: 321 RPVFVTHFPASLKPFYMKRDSTGNLVEGFDLLVPYGGELCGGSLREDSYEVLKERMEA 378


>gi|224539962|ref|ZP_03680501.1| hypothetical protein BACCELL_04874 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518416|gb|EEF87521.1| hypothetical protein BACCELL_04874 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 329

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L      Q G+R  +      +    + E  E    +        +P  E         
Sbjct: 149 ELRLEMGSQLGLRDKNTFACLWVVDFPMFEWSEQENRLMAMHHPFTHPKDEDIDLLDTDP 208

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL-ACL 313
                  +++    +E+      + DP  Q   FE           E       FL    
Sbjct: 209 AAVRADAYDMVINGVEVGGGSIRIHDPKLQAKMFEIL-----GFTPEKAEEQFGFLMNAF 263

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               P   G+A G DR V L  G ++I + I  P
Sbjct: 264 KYGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFP 297


>gi|165971540|gb|AAI58403.1| LOC100145033 protein [Xenopus (Silurana) tropicalis]
          Length = 403

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 15/156 (9%)

Query: 197 LYLQAQQAGIRVAHDD-----TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
              Q ++ G+ +            D    +  E  E  L          +P   + L   
Sbjct: 219 AAAQLEEYGVPLRDPTAFHFLWVVDFPLFLPKEDNELELESAHHPFTAPHPEDTALLHT- 277

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
                  ++ ++L     E+      + +   QR   +  ++       E   +    L 
Sbjct: 278 -DPAKVRSQHYDLVLNGSEVGGGSIRIHNSNLQRWVLQDVLK-------EDVSLLSHLLE 329

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            L +  P   GIA+G DRL+ ++ GA +I +VI  P
Sbjct: 330 ALQSGAPPHGGIALGLDRLIAIIVGAPSIRDVIAFP 365



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 11/114 (9%)

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 1   QSPQQFKQLLIIGGLDRYFQIARCYRDEGSKPDRQPEFTQVDIEMSFVDQAGIQSLVEGM 60

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           +R          FS+        +    ++ A+A + Y  +D   T       D
Sbjct: 61  LR----------FSWPEEKGPLQAPFPVMSYADAMSSY-GVDKPDTRFEMKIQD 103


>gi|326910915|ref|NP_001192099.1| aspartyl-tRNA synthetase, mitochondrial [Acyrthosiphon pisum]
 gi|328698565|ref|XP_003240672.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Acyrthosiphon
           pisum]
          Length = 645

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 61/172 (35%), Gaps = 18/172 (10%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDH 71
            +   +  L  R+ +   +RE+ +   +F+E+++ +L + + G       F      +  
Sbjct: 209 RYPEMQYNLRLRSKLLMKMREFLINHREFVEVETPTLFKKTHGGAQE---FIVPTHEK-- 263

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
             K   L  SP+   + L+    ++ F  A  +R+       QPEFT L+   +  + + 
Sbjct: 264 -GKCYSLVQSPQQLKQMLMVGSMDRYFQVAKCYRDEGAKSDRQPEFTQLDIEMSFTNQDG 322

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +M     ++         K                 ++  EA   Y +    
Sbjct: 323 VMLLIEELLSFVWPSELGK----------IKIPFPRLSYEEAMVTYGSDKPD 364



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 51/171 (29%), Gaps = 11/171 (6%)

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
            +  DL             +L    +   +  + DD W  ++          +  I    
Sbjct: 451 ISEHDLVAIASGSKYKSLSVLGKINEHFKVDNSSDDRWRFVWIINFPLFEMDSNQIQSVH 510

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                P  E    N+          ++L     E+      + D   Q       +    
Sbjct: 511 HPFTQPQTEITSDNLLEVKGFH---YDLVLNGSEVGGGSIRIHDANLQTKVIGSILNI-- 565

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
               ET       +  L    P   GIA+G DRL+ ++   N+I +VI  P
Sbjct: 566 --PIETM---SHLVEALKSGCPPHGGIALGVDRLLSILCNTNSIRDVIAFP 611


>gi|256001942|gb|ACU52295.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001944|gb|ACU52296.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001948|gb|ACU52298.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001950|gb|ACU52299.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001952|gb|ACU52300.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001954|gb|ACU52301.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001956|gb|ACU52302.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001958|gb|ACU52303.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001960|gb|ACU52304.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001964|gb|ACU52306.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001972|gb|ACU52310.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001980|gb|ACU52314.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001986|gb|ACU52317.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001988|gb|ACU52318.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001990|gb|ACU52319.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001992|gb|ACU52320.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001994|gb|ACU52321.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001996|gb|ACU52322.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001998|gb|ACU52323.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002000|gb|ACU52324.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002002|gb|ACU52325.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002004|gb|ACU52326.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002006|gb|ACU52327.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002008|gb|ACU52328.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002010|gb|ACU52329.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002014|gb|ACU52331.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002016|gb|ACU52332.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002018|gb|ACU52333.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002020|gb|ACU52334.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002022|gb|ACU52335.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002024|gb|ACU52336.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002026|gb|ACU52337.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002028|gb|ACU52338.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002030|gb|ACU52339.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002032|gb|ACU52340.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002034|gb|ACU52341.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002036|gb|ACU52342.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002038|gb|ACU52343.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002040|gb|ACU52344.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002042|gb|ACU52345.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002044|gb|ACU52346.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002046|gb|ACU52347.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002048|gb|ACU52348.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002050|gb|ACU52349.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002052|gb|ACU52350.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002054|gb|ACU52351.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002056|gb|ACU52352.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002058|gb|ACU52353.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002060|gb|ACU52354.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002062|gb|ACU52355.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002064|gb|ACU52356.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002066|gb|ACU52357.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002068|gb|ACU52358.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002070|gb|ACU52359.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002072|gb|ACU52360.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002074|gb|ACU52361.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002076|gb|ACU52362.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002078|gb|ACU52363.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002080|gb|ACU52364.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002082|gb|ACU52365.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002086|gb|ACU52367.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002088|gb|ACU52368.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002090|gb|ACU52369.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002092|gb|ACU52370.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002098|gb|ACU52373.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002100|gb|ACU52374.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002102|gb|ACU52375.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002104|gb|ACU52376.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002106|gb|ACU52377.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002108|gb|ACU52378.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002110|gb|ACU52379.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002112|gb|ACU52380.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002114|gb|ACU52381.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
          Length = 192

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 9/173 (5%)

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
                        +  +    +T+ E+ + Y  +D+    D+  +          ++  +
Sbjct: 26  VQYSHLKSGPQVVDFKAPWIRMTMKESISVYGGVDVDLHADHELRKILETQTSLPEKTYV 85

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELY 265
             +  +  + +F  ++ +K      +     +  +P   + L     + D    +RFE +
Sbjct: 86  HASRGELIALLFDELVCDK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESF 139

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEM 316
               ELCNA  EL DP++QR   E++M++K     +E +PIDE+FL  L   M
Sbjct: 140 CLGKELCNAYSELNDPLQQRKLLEEQMRKKALNPDSEYHPIDEEFLEALCQGM 192


>gi|295668186|ref|XP_002794642.1| aspartyl-tRNA synthetase, mitochondrial [Paracoccidioides
           brasiliensis Pb01]
 gi|226286058|gb|EEH41624.1| aspartyl-tRNA synthetase, mitochondrial [Paracoccidioides
           brasiliensis Pb01]
          Length = 685

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 14/135 (10%)

Query: 227 EPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P             +          ++L    +EL      +   
Sbjct: 531 EPGQGGAAGITSTHHPFTAPLHESDISLLLTDPTKAVADHYDLVLNGVELGGGSRRIHSA 590

Query: 282 IEQRHRFEKEMQE-KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
             Q       ++   +++ +  +      L  L    P  +GIA+GFDRLV ++ G  ++
Sbjct: 591 AVQDFILRDILKMPAERLADFAH-----LLEALRAGCPPHAGIALGFDRLVAVMLGRESV 645

Query: 340 NEVIWTPFSQSNQEE 354
            +VI  P  +S + E
Sbjct: 646 RDVIAFP--KSGKGE 658



 Score = 76.6 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 69/182 (37%), Gaps = 17/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R   ++ LRE   + Q  F+EI++  L + +P      R F      +      
Sbjct: 215 RGALQFRARARNVLRETLEDFQPPFLEIETPLLFKSTPEGA---REFLVPTRRR---GLA 268

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 269 YALPQSPQQYKQILMASGIHRYYQFARCFRDEDLRADRQPEFTQLDLEMSFAT------- 321

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E A ++++S               T   A A+Y +      +    +   H
Sbjct: 322 -GEDVMKIIEAAMKRLWSTLMPAPLTPESFPRTTYENAMAKYGSDKPDVRIGMEIKRIEH 380

Query: 196 LL 197
           ++
Sbjct: 381 MI 382


>gi|297562031|ref|YP_003681005.1| aspartyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846479|gb|ADH68499.1| aspartyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 584

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 56/178 (31%), Gaps = 9/178 (5%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVA-HDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           D            + LL     + G R    D +  +I     +   E          + 
Sbjct: 379 DAVFFAAGARTASQELLGAARLEIGRRCGLIDTSRWEILWITDMPLFEEADEEGSWKPVH 438

Query: 240 RY---PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
                PA +             ++ F+L     EL +    +     Q+  F+     K 
Sbjct: 439 HPFTAPAVQDEADFQDHPGTTDSRAFDLVLNGYELVSGSIRIHRAEMQQRIFDVIGLSKA 498

Query: 297 KIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               E        L       P   G+A+G+DR+VML+ G   I EVI  P + S  +
Sbjct: 499 ----EAESKFGFLLEAFKFGPPPHGGLAVGWDRIVMLLAGQPTIREVIAFPKTASGGD 552



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 16/193 (8%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           +   R R            L  R+       E   +  F  +++  +   +P      R 
Sbjct: 117 ETRLRYRYLDIRRQEMADNLRLRSKATYVAHEVMRDLGFTYVETPYMTRSTPEG---ARD 173

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F   + +Q        L  SP+   + L+  G E+ +     +R+ +     QPEFT ++
Sbjct: 174 FLVPVRLQ--PGHWYALPQSPQLFKQLLMVGGMERYYQLTRCFRDEDLRADRQPEFTQID 231

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +    E L      +               +          +     +   R+    
Sbjct: 232 LEMSFVDEEDLFAVGEKLFTRLLREVRGVELPERFPRMRYSEAMDRFGSDKPDLRFGQEL 291

Query: 182 LGTTLDNPDQPDR 194
           +  T    D P R
Sbjct: 292 VEVTAYFADTPFR 304


>gi|320035890|gb|EFW17830.1| aspartyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 688

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 18/172 (10%)

Query: 194 RHLLYLQAQQAGIRVA----HDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-----AP 244
           R  ++  A + G + A    H    +           EP  G         +P      P
Sbjct: 498 RRAIHKAAVETGFKPAPTGFHFLWVTHFPLFSPSSDSEPGQGGTAGIASTHHPFTAPLTP 557

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           E     +          +++    +EL      +     Q       ++       E+  
Sbjct: 558 EDVSLLLTDPTKATADHYDIVVNGVELGGGSRRIHSAEVQEFILRDILKM-----PESRL 612

Query: 305 ID-EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
            D    L  L    P  SGIA+GFDRL+ ++ G  ++ +VI  P  +S + E
Sbjct: 613 ADFSHLLDALRAGCPPHSGIALGFDRLIAVMLGKESVRDVIAFP--KSGKGE 662



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 65/168 (38%), Gaps = 17/168 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R      LRE   E    F+E+++  L + +P      R F             
Sbjct: 219 RQALAFRARANKVLREVLEECDPPFMEVETPLLFKSTPEG---AREFLIPTRRP---GLA 272

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+++G  + + FAH +R+ +     QPEFT L+   +    E +M  
Sbjct: 273 YALPQSPQQYKQILMSSGVPRYYQFAHCFRDEDLRADRQPEFTQLDMEMSFARGEDVMST 332

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
              +IR        K++S         S    +T  EA ++Y +    
Sbjct: 333 IEQVIR--------KLWSTLMPEQLDASPFPRMTYNEAMSKYGSDKPD 372


>gi|119500862|ref|XP_001267188.1| aspartyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
 gi|119415353|gb|EAW25291.1| aspartyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
          Length = 565

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 44/126 (34%), Gaps = 10/126 (7%)

Query: 227 EPNLGINCCTILDRYPAPESALANIYPA---DPRFT--KRFELYACNIELCNACDELLDP 281
           EP  G         +P      A        DP       ++L    +EL      + D 
Sbjct: 412 EPGQGGAAGISSTHHPFTAPKTAADVDQLLTDPTKAVADHYDLVVNGVELGGGSRRIHDA 471

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q       +Q +     E        L  L    P  +G+A+GFDRLV ++ G  ++ 
Sbjct: 472 AVQEFILRDILQMR----PERLADFSHLLDALRAGCPPHAGLALGFDRLVAVMLGKESVR 527

Query: 341 EVIWTP 346
           +VI  P
Sbjct: 528 DVIAFP 533



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 21/178 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R  +++  RE   + +  F+EI++  L + +P      R F      +      
Sbjct: 91  RDALRFRAQVRNICREELEQCRPPFVEIETPLLFKSTPEGA---REFLVPTRRR---GLA 144

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT----MLEWYRAHESYEQ 131
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT     L+   +  + E 
Sbjct: 145 YALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLLAQLDLEMSFATGED 204

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           +M+    IIR        +++SF   +  P      ++  +A +RY +    T     
Sbjct: 205 VMRTVEGIIR--------RLWSFLMKDEAPSGPFRRMSYQDAMSRYGSDKPDTRFGME 254


>gi|303321267|ref|XP_003070628.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110324|gb|EER28483.1| aspartyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 688

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 18/172 (10%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI----EPNLGINCCTILDRYP-----AP 244
           R  ++  A + G + A         +   +       EP  G         +P      P
Sbjct: 498 RRAIHKAAVETGFKPAPTGFHFLWVTHFPLFSASSDSEPGQGGTAGIASTHHPFTAPLTP 557

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
           E     +          +++    +EL      +     Q       ++       E+  
Sbjct: 558 EDVSLLLTDPTKATADHYDIVVNGVELGGGSRRIHSAEVQEFILRDILKM-----PESRL 612

Query: 305 ID-EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
            D    L  L    P  SGIA+GFDRL+ ++ G  ++ +VI  P  +S + E
Sbjct: 613 ADFSHLLDALRAGCPPHSGIALGFDRLIAVMLGKESVRDVIAFP--KSGKGE 662



 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 65/168 (38%), Gaps = 17/168 (10%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R      LRE   E    F+E+++  L + +P      R F             
Sbjct: 219 RQALAFRARANKVLREVLEECDPPFMEVETPLLFKSTPEG---AREFLIPTRRP---GLA 272

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+++G  + + FAH +R+ +     QPEFT L+   +    E +M  
Sbjct: 273 YALPQSPQQYKQILMSSGVPRYYQFAHCFRDEDLRADRQPEFTQLDMEMSFARGEDVMST 332

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
              +IR        K++S         S    +T  EA ++Y +    
Sbjct: 333 IEQVIR--------KLWSTLMPEQLDASPFPRMTYNEAMSKYGSDKPD 372


>gi|291336619|gb|ADD96165.1| hypothetical protein [uncultured organism MedDCM-OCT-S05-C185]
          Length = 238

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 52/183 (28%), Gaps = 19/183 (10%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D        +     L      + G+     +     F  ++   +     +        
Sbjct: 37  DAIFFSAGKETEAAKLAGNARLKLGVDQELIEQNIYKFCWVVDFPMFEKDEVTGKIEFSH 96

Query: 241 YPAPESA----LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EK 290
            P                      ++++    IEL +       P      F      ++
Sbjct: 97  NPFSMPQGGLEALETKDPLDILAFQYDIVCNGIELSSGAIRNHLPDVMIKAFSIAGYSKE 156

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           E++E+       +             P   G A G DR+VML+    NI EVI  P +Q 
Sbjct: 157 EVEERFSGMLNAF---------RYGAPPHGGFAPGIDRIVMLIANEPNIREVILFPMNQK 207

Query: 351 NQE 353
            ++
Sbjct: 208 AED 210


>gi|289615759|emb|CBI57500.1| unnamed protein product [Sordaria macrospora]
          Length = 644

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 12/135 (8%)

Query: 226 IEPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLD 280
           I+P  G         +P       +                ++L    +EL      +  
Sbjct: 483 IDPGQGGQAGFKATHHPFTAPLTEDDVELLATDPLKARADHYDLVVNGVELGGGSRRIHL 542

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
              Q +     ++                L  L    P  +G A+GFDRLV ++T  +++
Sbjct: 543 SSMQEYVMRNILKMTDAGL--AQF--SHLLEALRAGCPPHAGFALGFDRLVAVLTHTDSV 598

Query: 340 NEVIWTPFSQSNQEE 354
            +VI  P  +S + E
Sbjct: 599 RDVIAFP--KSMKGE 611



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 80/237 (33%), Gaps = 17/237 (7%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  LL R  I   LR+   +  F E+++  L + +P      R F      +        
Sbjct: 131 RSRLLARPQIGFQLRKTLNDLDFTEVETPILFKSTPEG---AREFLVPTRRR---GLAYA 184

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+++G    + FA  +R+ +     QPEFT L+      + E +M+   
Sbjct: 185 LPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQPEFTQLDMEMGFATGEDVMRTVE 244

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            ++       N +    ++ +         +   E+       D       P  P   L 
Sbjct: 245 TLVTELLPALNAQFNIVKSGDDIYPVPKRGLNNGESIE-----DGDIKWPEPTAPFLRLT 299

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
           Y +A              D+       ++E  L     +++     P   +  I P 
Sbjct: 300 YDEA-----MTRFGIDKPDLRIPFEFHRVEHILPAQFVSMITHTEQPIVEVFRIRPQ 351


>gi|154483437|ref|ZP_02025885.1| hypothetical protein EUBVEN_01140 [Eubacterium ventriosum ATCC
           27560]
 gi|149735689|gb|EDM51575.1| hypothetical protein EUBVEN_01140 [Eubacterium ventriosum ATCC
           27560]
          Length = 598

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 75/209 (35%), Gaps = 17/209 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + + +  ++ R+ + S LRE  VE  F+EI +  L   SP      R +          
Sbjct: 149 RNAKVKDNMIFRSKVISYLREKMVEMGFLEIQTPILCASSPEG---ARDYIVPSRK---F 202

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           +   Y L  +P+   + L+ +G +K F  A  +R+ +      P EF  L++  +  + E
Sbjct: 203 KGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMSFATQE 262

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
            + +    ++         + +          +    I+  +A   + +   DL   L  
Sbjct: 263 DVFRVGEKVLADTFNKFAPEGYEVTQ------APFPIISYKQAMLEFGSDKPDLRNPLRI 316

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDI 217
            D  D           G  V      +D+
Sbjct: 317 IDLTDFFQRCTFKPFHGKTVRAIKVHADM 345



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 65/202 (32%), Gaps = 20/202 (9%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDR-------HLLYLQAQQAGIRVAHDDTWSD 216
           +     + E     A +++G T+      ++        +     ++  +   +   +  
Sbjct: 382 KFIPDDMKEEIRETAGLEVGDTIFFIADNEKNAALYAGQIRTALGERLDLIEKNSFKFCY 441

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACD 276
           I    + E  +    +         P            +     ++++    +EL +   
Sbjct: 442 INDFPMYEYDKETKKMEFTHNPFSMPQGGLEALETMDPEEILAYQYDIVCNGVELSSGAV 501

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-----EMPQSSGIAMGFDRLVM 331
              D       FE         Y E   + E F   L        P  +G+A G DR++M
Sbjct: 502 RNHDMKIMVKAFEI------AGYTEE-DLKEKFG-ALYNAFQFGAPPHAGMAPGVDRMIM 553

Query: 332 LVTGANNINEVIWTPFSQSNQE 353
           L+    NI EVI  P + + Q+
Sbjct: 554 LLRDEENIREVIPFPMNGNAQD 575


>gi|308177518|ref|YP_003916924.1| aspartate--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744981|emb|CBT75953.1| aspartate--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 595

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 22/195 (11%)

Query: 11  NRDFHYR-RRPF----LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
            R  +   RRP     +  R+      R    +  +IEI++ +L   +P      R F  
Sbjct: 120 LRHRYLDLRRPTPARNIRLRSEANRVARNLLHDQGYIEIETPTLTRSTPEG---ARDFVV 176

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +         L  SP+   + L   G EK +  A  +R+ +     QPEFT L+   
Sbjct: 177 PARL--TPGSWYALPQSPQLFKQLLQVGGFEKYYQIARCYRDEDFRADRQPEFTQLDIEA 234

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +         +  +II    ++  +    +  ++    +    +  +EA A+Y   D   
Sbjct: 235 SFV-------EEDDIIELGEKLVTEL---WNLIDVQVPTPIRRMAYSEAMAKY-GSDKPD 283

Query: 185 TLDNPDQPDRHLLYL 199
                +  +    + 
Sbjct: 284 LRFGLELTEMTEYFA 298



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 45/110 (40%), Gaps = 5/110 (4%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
             + +P+    + +  DP       +++     E+      +     Q   F+     ++
Sbjct: 448 HAFTSPKPEFMDTFDTDPASALSYAYDIVCNGNEIGGGSIRIHQRDVQERVFKLMGVTQE 507

Query: 297 KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +   +   + E F       P   GIA+G+DR++ L+T + +I +VI  P
Sbjct: 508 QADTQFGFLLEGF---KYGAPPHGGIALGWDRVLQLLTNSESIRDVIAFP 554


>gi|326473216|gb|EGD97225.1| aspartyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 685

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 64/173 (36%), Gaps = 17/173 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R    ++LR    E +  F+E+++  L + +P      R F      Q      
Sbjct: 214 RQSLAFRAKANAALRRALEECEPPFLEVETPILFKSTPEGA---REFLVPTRNQ---GLA 267

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 268 YALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQPEFTQLDMEMSFAT------- 320

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
               +    E   +K+++              ++  EA   Y +    T  D 
Sbjct: 321 -AEDVITTTETLVKKLWASVMPEPLGPEPFPRMSYYEAMGSYGSDKPDTRFDM 372



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 41/126 (32%), Gaps = 10/126 (7%)

Query: 227 EPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P       + A   +          ++L    +EL      +   
Sbjct: 530 EPGQGGTAGIASTHHPFTAPRTAKDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSA 589

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q       ++                L CL    P  +GIA+GFDRL+ ++ G  ++ 
Sbjct: 590 AVQEFVLRDILKV----PPSRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVR 645

Query: 341 EVIWTP 346
            VI  P
Sbjct: 646 NVIAFP 651


>gi|218132544|ref|ZP_03461348.1| hypothetical protein BACPEC_00403 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992654|gb|EEC58656.1| hypothetical protein BACPEC_00403 [Bacteroides pectinophilus ATCC
           43243]
          Length = 591

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 68/191 (35%), Gaps = 16/191 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
            + + +  +L R+ + + LR+   +  F+EI +  L   SP     +I            
Sbjct: 142 RNQKVKDNILFRSNVITYLRQKMNDMGFVEIQTPILCASSPEGARDYIVPSRVHKGKFYA 201

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+A+G +K F  A  +R+ +      P EF  L++  +  + E
Sbjct: 202 LPQ------APQQFKQLLMASGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMSFATQE 255

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      ++    E    + +          +    I+  +A   +   D     +   
Sbjct: 256 DVFAVGEEVLTSTFEKFAPEGYE------VTKAPFPIISYKQAMLEF-GSDKPDLRNPLR 308

Query: 191 QPDRHLLYLQA 201
             D    + + 
Sbjct: 309 IIDVTEFFQRC 319



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 43/140 (30%), Gaps = 13/140 (9%)

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDEL 278
              + E  E    I         P       N          ++++    IEL +     
Sbjct: 437 DFPMYELDEETKQIGFTHNPFSMPQGGLEALNTKNPLDILAYQYDIVCNGIELSSGAVRN 496

Query: 279 LDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLV 333
            D       FE     E   K K                    P  +G+A G DR++ML+
Sbjct: 497 HDIDIMVKAFEIAGYDEETLKAKFG--------ALYNAFQFGAPPHAGMAPGVDRMIMLL 548

Query: 334 TGANNINEVIWTPFSQSNQE 353
               NI EVI  P + + Q+
Sbjct: 549 RNEENIREVIAFPMNSTAQD 568


>gi|237802971|ref|YP_002888165.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|231274205|emb|CAX10999.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 582

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 56/161 (34%), Gaps = 18/161 (11%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLY 77
             L+ R+ +  + R+Y  E  F E+ +  L + +P     ++            + +   
Sbjct: 142 DRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGARDYLVPSRIYPGNFYALPQ--- 198

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   +    E L     
Sbjct: 199 ---SPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQPEFTQIDMEMSFGEPEDLFPVVE 255

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++     V                +    +T  EA   Y 
Sbjct: 256 ELVARLFAVKG----------IELKAPFLRMTYQEAKDSYG 286



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 13/134 (9%)

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             +    +         P  E             +  ++L     E+ +    + +P  Q
Sbjct: 436 FAKEEGELCPEHHPFTAPLDEDISLLDSDPFAVRSSSYDLVLNGYEIASGSQRIHNPDLQ 495

Query: 285 RHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
              F      +   K+K           F+  L+   P   GIA+G DR++M++TGA  I
Sbjct: 496 NKIFALLKLSQESVKEKFG--------FFIDALSFGTPPHLGIALGLDRIMMVLTGAETI 547

Query: 340 NEVIWTPFSQSNQE 353
            EVI  P +Q   +
Sbjct: 548 REVIAFPKTQKAGD 561


>gi|15605271|ref|NP_220057.1| aspartyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789279|ref|YP_328365.1| aspartyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237804893|ref|YP_002889047.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311360|ref|ZP_05353930.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317661|ref|ZP_05358907.1| aspartyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|6919971|sp|O84546|SYD_CHLTR RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196627|sp|Q3KLF5|SYD_CHLTA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|3328981|gb|AAC68144.1| Aspartyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167809|gb|AAX50817.1| aspartyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273193|emb|CAX10106.1| aspartyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|297748672|gb|ADI51218.1| Aspartyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749552|gb|ADI52230.1| Aspartyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 582

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 13/134 (9%)

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             +    +         P  E             +  ++L     E+ +    + +P  Q
Sbjct: 436 FAKEEGELCPEHHPFTAPLDEDISLLDSDPFAVRSSSYDLVLNGYEIASGSQRIHNPDLQ 495

Query: 285 RHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
              F      +   K+K           F+  L+   P   GIA+G DR++M++TGA  I
Sbjct: 496 NKIFALLKLSQESVKEKFG--------FFIDALSFGTPPHLGIALGLDRIMMVLTGAETI 547

Query: 340 NEVIWTPFSQSNQE 353
            EVI  P +Q   +
Sbjct: 548 REVIAFPKTQKAGD 561



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 56/161 (34%), Gaps = 18/161 (11%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLY 77
             L+ R+ +  + R+Y  E  F E+ +  L + +P     ++            + +   
Sbjct: 142 DRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGARDYLVPSRIYPGNFYALPQ--- 198

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   +    E L     
Sbjct: 199 ---SPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQPEFTQIDMEMSFGGPEDLFPVVE 255

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++     V                +    +T  EA   Y 
Sbjct: 256 ELVARLFAVKG----------IELKAPFLRMTYQEAKDSYG 286


>gi|91070510|gb|ABE11417.1| aspartyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           HOT0M-3E5]
          Length = 143

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 11/108 (10%)

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
             +         +      ++L    +EL      + +   QR   +        +    
Sbjct: 11  KSKDPENLQKEIEDSTANAYDLVLNGLELGGGSLRIHEANLQREVLKT-------VGLTA 63

Query: 303 YPIDEDF---LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             I+E F   +  L    P   GIA G DR+ ML+ GA++I E I  P
Sbjct: 64  KEINEKFGFLIEALEMGAPPHGGIAFGLDRITMLIIGADSIRETIAFP 111


>gi|307295007|ref|ZP_07574849.1| aspartyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306879481|gb|EFN10699.1| aspartyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 594

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 61/190 (32%), Gaps = 24/190 (12%)

Query: 15  HYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
            YR    RR  L    +KR  I S +R       F E  +  L   SP      R F   
Sbjct: 127 RYRFLDLRRETLHANIVKRTKIISDMRRRMEGAGFTEYSTPILTASSPEG---ARDFLVP 183

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             I        Y L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L+  
Sbjct: 184 SRIH---PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E +      +I    E               P      I  AEA  +Y   D  
Sbjct: 241 MSFVTQEDVWNTMEPVIAQVFEQFAD------GKPVTPAGSFPRIPHAEAMLKY-GSDKP 293

Query: 184 TTLDNPDQPD 193
              +     D
Sbjct: 294 DLRNPILITD 303



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 11/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +Q  +          I      E  E    I+        P  +  L  +   DP     
Sbjct: 418 EQLDLIDKDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMP--QGGLDALNDQDPLTINA 475

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++       +CN   E+     +    E  ++  +K+      ++E F           P
Sbjct: 476 YQY----DMVCNGY-EIASGSIRNQSPELMVKAFEKVGLSQQDVEERFGGLYRAFQYGAP 530

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G+A G DR+VML+ GA N+ E+   P +Q  ++
Sbjct: 531 PHGGMAAGVDRIVMLLCGAQNLREITLFPMNQRAED 566


>gi|296229763|ref|XP_002760400.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial [Callithrix
           jacchus]
          Length = 645

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 187 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGA---KEFLVPSREPGKF---YSLP 240

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 241 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGIQSLIEGL 300

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+ N           +T AEA A Y   D   T       D
Sbjct: 301 LQY----------SWPNDKNPVVVPFPSMTFAEALATY-GTDKPDTRFGMKIID 343



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 241 YPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
           +P+    L          ++ ++L     E+      + +   Q++     ++       
Sbjct: 508 HPSDIHLLYT--EPKKVRSQHYDLVLNGNEIGGGSIRIHNAELQQYILATLLK------- 558

Query: 301 ETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E   +    L  L    P   GIA+G DRL+ +VTG+ +I +VI  P
Sbjct: 559 EDVKLLSHMLQALDYGAPPHGGIALGLDRLICVVTGSPSIRDVIAFP 605


>gi|327270229|ref|XP_003219892.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Anolis
           carolinensis]
          Length = 635

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           + ++L     E+      + +  +Q   F  E   K+      +      L  L +  P 
Sbjct: 518 QHYDLVLNGSEIGGGSIRIHNAKQQC--FVLENVLKEDTKPLAH-----LLEALDSGAPP 570

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             GIA+G DRL+ L+ GA +I +VI  P
Sbjct: 571 HGGIALGLDRLICLIVGAESIRDVIAFP 598



 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY      F+++++ +L + +PG     + F               L 
Sbjct: 180 LRLRSQMVMKMREYLCNYYGFVDVETPTLFKKTPGG---AKEFVVPSREAGKF---YSLP 233

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 234 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSKPDRQPEFTQVDIEMSFVDQPGIQALIEGL 293

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+        +    I+  EA + Y   D   T       D
Sbjct: 294 LQY----------SWPLEKGPINTPFPSISYNEALSVY-GTDKPDTRFAMKITD 336


>gi|256002084|gb|ACU52366.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002094|gb|ACU52371.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256002096|gb|ACU52372.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
          Length = 192

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 9/173 (5%)

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
                        +  +    +T+ E+ + Y  +D+    D+  +          ++  +
Sbjct: 26  VQYSHLKSGPQVVDFKAPWIRMTMKESISVYGGVDVDLHADHELRKILETQTSLPEKTYV 85

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELY 265
             +  +  + +F  ++ +K      +     +  +P   + L     + D    +RFE +
Sbjct: 86  HASRGELIALLFDELVCDK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESF 139

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEM 316
               ELCNA  EL DP++QR   E++M++K     +E +PIDE+FL  L   M
Sbjct: 140 CLGKELCNAYSELNDPLQQRKLLEEQMRKKALNPDSEYHPIDEEFLEALCQGM 192


>gi|34580859|ref|ZP_00142339.1| asparaginyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262244|gb|EAA25748.1| asparaginyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 612

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 66/203 (32%), Gaps = 9/203 (4%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      +    +  R+ I + +R     + F E  +  L   SP      R F   
Sbjct: 138 KHRFLDLRREKLHNNITLRSQIIAHIRHLMTASGFTEFQTPILTASSPEG---ARDFLVP 194

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+  
Sbjct: 195 SRMH---PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE 251

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E +      ++         K  S     C P++E      ++       I + 
Sbjct: 252 MSFVTQEDVFSTIEPVMYDLFTKFTDKKVSETPFVCIPYNESMLKYGSDKPDLRNPIIIA 311

Query: 184 TTLDNPDQPDRHLLYLQAQQAGI 206
              +     D  +     ++  I
Sbjct: 312 DVTEIFRDSDFTIFRENIKKGSI 334



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA----PESALANIYPADPR 257
           ++  +       +  I      E  E    I+        P                   
Sbjct: 428 EELDLLEKDCFKFCWITDFPFYELNEETGKIDFSHNPFSMPQGGIDALEQAKTTEELLEL 487

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT 314
              ++++    IEL +       P      F          Y+E   +D+ F   +    
Sbjct: 488 TAYQYDIVCNGIELSSGAIRNHKPEIMYKAFSI------AGYSEE-EVDKRFGGMIRAFK 540

Query: 315 -EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   GIA G DR+VML+  A NI E+I  P +Q  ++
Sbjct: 541 FGAPPHGGIAPGIDRIVMLLAEATNIREIIAFPLNQQAED 580


>gi|256001962|gb|ACU52305.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
          Length = 192

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 9/173 (5%)

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
                        +  +    +T+ E+ + Y  +D+    D+  +          ++  +
Sbjct: 26  VQYSHLKSGPQVVDFKAPWIRMTMKESISVYGGVDVDLHADHKLRKILETQTSLPEKTYV 85

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELY 265
             +  +  + +F  ++ +K      +     +  +P   + L     + D    +RFE +
Sbjct: 86  HASRGELIALLFDELVCDK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESF 139

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEM 316
               ELCNA  EL DP++QR   E++M++K     +E +PIDE+FL  L   M
Sbjct: 140 CLGKELCNAYSELNDPLQQRKLLEEQMRKKALNPDSEYHPIDEEFLEALCQGM 192


>gi|209527075|ref|ZP_03275590.1| tRNA synthetase class II (D K and N) [Arthrospira maxima CS-328]
 gi|209492503|gb|EDZ92843.1| tRNA synthetase class II (D K and N) [Arthrospira maxima CS-328]
          Length = 207

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 51/162 (31%), Gaps = 9/162 (5%)

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           +  ++          +++     +  +W           +   L      I+  YP    
Sbjct: 47  NEFERITYTEAIALLEKSDRTFEYPVSWGLDLQSEHERYLAEELFKKPV-IVTDYPREIK 105

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           A       D +  +          L     E++   ++  R +   +  + +      + 
Sbjct: 106 AFYMRQNDDEKTVRAM------DVLAPKVGEIIGGSQREERLDILQKRMEALQINPDEL- 158

Query: 307 EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +L          +G  +GF+R+V  +TG  NI +VI  P 
Sbjct: 159 WWYLDLRRYGTVPHAGFGLGFERVVQFMTGMANIRDVIPFPR 200


>gi|322783669|gb|EFZ11007.1| hypothetical protein SINV_08262 [Solenopsis invicta]
          Length = 616

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 45/158 (28%), Gaps = 18/158 (11%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           R       +  G ++   +      +   +   E     +      +    +       P
Sbjct: 441 RVEFTNTLEAKGEQIRSSENEFLWITDFPLFTFEGTTLESTHHPFTQPHPDDMEYLTTDP 500

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE----DF 309
              R    ++L     E+      + D   QR                   IDE      
Sbjct: 501 LKVRGLH-YDLVMNGSEIAGGSIRIHDANLQRQILRMLN------------IDETKLSHM 547

Query: 310 LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L  L    P   GIA+G DRLV L+    +I  VI  P
Sbjct: 548 LEALTYGAPPHGGIAIGLDRLVCLLCNEKSIRNVIAFP 585



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 79/235 (33%), Gaps = 13/235 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAFSTELIIQDH 71
            +   +  L  R+ +   +RE+ +    F+++++ +L + +PG       F      + +
Sbjct: 165 RYPEMQRNLRLRSSLIMKMREFLINECSFVDVETPTLFKSTPGGAQE---FVVPTRQRGN 221

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+  G ++ F  A  +R+       QPEFT L+   +    + 
Sbjct: 222 F---YSLVQSPQQFKQLLMVGGLDRYFQVARCYRDESARHDRQPEFTQLDIEMSFVDRDG 278

Query: 132 LMKDCMNIIRCAAE-----VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
           +M    N++  +       V  + +     +      +P+     +        DL   +
Sbjct: 279 VMSLIENLLMYSWPEESIKVPFKLMMYEDVMKTYGTDQPDLRIPYQIQDLTHMFDLPVLM 338

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           +     D+                  +  D  S+I  +       I      D +
Sbjct: 339 EAVKHEDKQQKVYALVFPNQSKYLTKSIRDGLSKIRSDYFSATKLIQLKIENDSW 393


>gi|302502919|ref|XP_003013420.1| hypothetical protein ARB_00238 [Arthroderma benhamiae CBS 112371]
 gi|291176984|gb|EFE32780.1| hypothetical protein ARB_00238 [Arthroderma benhamiae CBS 112371]
          Length = 621

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 83/237 (35%), Gaps = 21/237 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R    ++LR    E +  F+EI++  L + +P      R F      Q      
Sbjct: 150 RQSLAFRAKANAALRRALEECEPPFLEIETPILFKSTPEG---AREFLVPTRNQ---GLA 203

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 204 YALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQPEFTQLDMEMSFAT------- 256

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E   +K+++              ++  EA A Y +    T  D   +  R 
Sbjct: 257 -AEDVITTTEALVKKLWASVMPEPLGPEPFPRMSYYEAMASYGSDKPDTRFDM--KLHRV 313

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
             YL A   G   + +    + F        E  + +    +    P  +  L N  
Sbjct: 314 EQYLPADFIGKISSLNSPVVEAFIVKGNGHPEETMRVLRSFMNT--PEAKPFLENPD 368



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 41/126 (32%), Gaps = 10/126 (7%)

Query: 227 EPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P       E A   +          ++L    +EL      +   
Sbjct: 466 EPGQGGTAGIASTHHPFTAPRTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHSA 525

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q       ++                L CL    P  +GIA+GFDRL+ ++ G  ++ 
Sbjct: 526 AVQEFVLRDILKV----PPSRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTPSVR 581

Query: 341 EVIWTP 346
            VI  P
Sbjct: 582 NVIAFP 587


>gi|239611007|gb|EEQ87994.1| aspartyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 643

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 14/135 (10%)

Query: 227 EPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P             +          ++L    +EL      +   
Sbjct: 464 EPGQGGAAGIASTHHPFTAPLRESDISLLLTDPTKVIADHYDLVLNGVELGGGSRRIHSA 523

Query: 282 IEQRHRFEKEMQE-KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
             Q       ++   +++ +  +      L  L    P  +GIA+GFDRLV ++ G  ++
Sbjct: 524 AVQEFILRDILKMPAERLADFAH-----LLEALRAGCPPHAGIALGFDRLVAVMLGKESV 578

Query: 340 NEVIWTPFSQSNQEE 354
            +VI  P  +S + E
Sbjct: 579 RDVIAFP--KSGKGE 591



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 17/181 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R   ++ LRE   E Q  FIEI++  L + +P      R F      +      
Sbjct: 148 RDALRFRARARNVLREALEECQLPFIEIETPLLFKSTPEGA---REFLVPTRRR---GMA 201

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 202 YALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLDLEMSFAT------- 254

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E A +K++S    +  P    +  T  +A A++ +      +    +   H
Sbjct: 255 -GEDVITVIEAAVKKLWSSLMTHSLPSESFQRTTYEDAMAKFGSDKPDVRIGMEIKRIEH 313

Query: 196 L 196
           +
Sbjct: 314 M 314


>gi|210632325|ref|ZP_03297292.1| hypothetical protein COLSTE_01186 [Collinsella stercoris DSM 13279]
 gi|210159641|gb|EEA90612.1| hypothetical protein COLSTE_01186 [Collinsella stercoris DSM 13279]
          Length = 584

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 68/193 (35%), Gaps = 29/193 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRA 61
           D   R R            L  R+    ++R    +  F E+++ +L + +P      R 
Sbjct: 123 DTRLRYRYLDLRRPEMAARLRLRSDFTFAIRSALHDRAFTEVETPALFKSTPEG---ARD 179

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     +Q       Y L  SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 180 FVVPSRLQ---PGNFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQPEFTQV 236

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + +M    +++  A      ++ +              I+  +A   Y   
Sbjct: 237 DIEMSFVEQDDVMSQLEDVLSDAFARVGVEMPT----------PLRRISYWDAMDTY-GS 285

Query: 181 DLGTTLDNPDQPD 193
           D   T    +  D
Sbjct: 286 DKPDTRYGMELVD 298



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 59/201 (29%), Gaps = 19/201 (9%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ--AQQAGIRVAHDDTWSDIFSRI 221
           +       +   R  +++ G  +     P R    +    +       +       F  +
Sbjct: 370 KFFTDEEMDELRRRCDVEPGDLVMFAAGPRRESDEILGGMRSHMADALNVPREGHDFLWV 429

Query: 222 LIEKIEPNLGINCCTILDRYPAPESALANIYPADPR----FTKRFELYACNIELCNACDE 277
           +   +            +  P     L  ++  D       +  ++      E       
Sbjct: 430 VDFPLFHWDEDGQRYEAEHQPFTLPHLDELHLLDEDPLKMGSCTYDFVMDGFEAGGGGMR 489

Query: 278 LLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVML 332
           + D   Q    E     E + + +            +  L    P   G A+G DR+ ML
Sbjct: 490 IHDAELQLKMLEFMGFTEERARAQFG--------FLMEALEFGAPPMGGFALGLDRVCML 541

Query: 333 VTGANNINEVIWTPFSQSNQE 353
           + G ++I +V+  P + S  +
Sbjct: 542 LAGTDSIRDVMAFPKTSSGSD 562


>gi|258578065|ref|XP_002543214.1| hypothetical protein UREG_02730 [Uncinocarpus reesii 1704]
 gi|237903480|gb|EEP77881.1| hypothetical protein UREG_02730 [Uncinocarpus reesii 1704]
          Length = 690

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 57/173 (32%), Gaps = 20/173 (11%)

Query: 194 RHLLYLQAQQAGIRVAHDD----TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
           R +L+  A + G + A         +           EP  G         +P       
Sbjct: 500 RRVLHKAATETGFKRAPTGFNFLWVTHFPLFSPSSDTEPGQGGTAGIASTHHPFTAPLGP 559

Query: 250 NIYP---ADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ--EKKKIYNET 302
                   DP       ++L    +EL      +     Q+      ++  E +      
Sbjct: 560 EDVDLLLTDPTKVVADHYDLVVNGVELGGGSRRIHSAEVQKFILRDILKVPENRLGD--- 616

Query: 303 YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
                  L  L    P  +GIA+GFDRL+ ++ G  ++ +VI  P  +S + E
Sbjct: 617 ---FSHLLEALRAGCPPHAGIALGFDRLIAIMLGKESVRDVIAFP--KSGKGE 664



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 63/174 (36%), Gaps = 17/174 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R      LRE   + +  F+E+++  L + +P      R F             
Sbjct: 221 RHALAFRARAGKVLREALEQCEPPFMEVETPLLFKSTPEGA---REFLVPTRRPGFA--- 274

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L++ G  + + FAH +R+ +     QPEFT L+   +  S E +M  
Sbjct: 275 YALPQSPQQYKQILMSGGIPRYYQFAHCFRDEDLRADRQPEFTQLDLEMSFASGEDVMNV 334

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              I+R                     +    +T  EA ++Y +      +   
Sbjct: 335 IERIVRQLWSAL--------MPEPLNDAPFPRMTYYEAMSKYGSDKPDPRIGME 380


>gi|158425283|ref|YP_001526575.1| aspartyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172048012|sp|A8IFX1|SYD_AZOC5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|158332172|dbj|BAF89657.1| aspartyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 590

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 68/197 (34%), Gaps = 31/197 (15%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + ++D        YR    RR  +    +KR  I  SLR+      F E  +  L
Sbjct: 110 LPLPVFGDQDYPEDIRLRYRFLDLRRERIHGNIMKRGQIIDSLRQRMKGQGFFEFQTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     I        Y L  +P+   + ++ +G ++ F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRIH---PGKFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P EF  L+   +  + + +      +IR   E         QN          
Sbjct: 224 DPRADRLPGEFYQLDLEMSFVTQDDVFAAVEPVIRGVFEEFGGGKPVTQN--------WP 275

Query: 167 YITVAEAFARYANIDLG 183
            I  AEA  +Y +    
Sbjct: 276 RIPYAEALRKYGSDKPD 292



 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 13/151 (8%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  +    I+        P  +  L  +   DP   K 
Sbjct: 416 EELKLIDTERFELAWIVDFPFYEWSDEEKKIDFSHNPFSMP--QGGLEALNGQDPLTIKA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKK-KIYNETYPIDEDF---LACL-TEM 316
           F+        CN   E+     + HR E  ++  +   Y+E   I E F           
Sbjct: 474 FQY----DIACNGY-EIASGGIRNHRPEAMVKAFELAGYDEATVI-ERFGGMYRAFQYGA 527

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           P   G+A G DR+VML+ G +N+ E+   P 
Sbjct: 528 PPHGGMAAGIDRIVMLLCGVSNLREISLFPM 558


>gi|325292528|ref|YP_004278392.1| Aspartyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060381|gb|ADY64072.1| Aspartyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 627

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 68/195 (34%), Gaps = 27/195 (13%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    +KR  I SS+R+   +  F E  +  L 
Sbjct: 143 PLPVFGEPEYPEDVRLKYRFLDLRRETLHKNIVKRTQIISSMRKGMGDLGFAEYTTPILT 202

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             SP      R F     I +   +   L  +P+   + L+ AG ++ F  A  +R+ + 
Sbjct: 203 ASSPEG---ARDFLVPSRIHE--GQFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDP 257

Query: 110 GCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                P EF  L+   +  + E +      ++          +F           E   I
Sbjct: 258 RADRLPGEFYQLDVEMSFVTQEDVWTTMEPMM--------TAVFEQFAEGKPVTKEWPRI 309

Query: 169 TVAEAFARYANIDLG 183
              E+  +Y +    
Sbjct: 310 PYDESIRKYGSDKPD 324



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 48/163 (29%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                 A +  +          I      E  +    I+        P            
Sbjct: 445 EARTRAADELNLIDRDRFEMCWIVDFPFFEYNDEEKKIDFAHNPFSMPQGGMEALEGQDP 504

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 +++      E+ +       P       E  ++  +K+      ++E F     
Sbjct: 505 LSIKAFQYDAVCNGFEIASGSIRNQSP-------ELMVKAFEKVGLSQSDVEERFGGLYR 557

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G A G DR+VML+ GA N+ E+   P +Q  Q+
Sbjct: 558 AFQYGAPPHGGCAFGIDRVVMLLVGAKNLREITLFPMNQQAQD 600


>gi|328883608|emb|CCA56847.1| Aspartyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 602

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 5/156 (3%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++AG    +   ++ I    + EK E    I+        P                
Sbjct: 409 EAAKRAGQFEENVFRFAWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLEALETQDPLDIL 468

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
             ++++    IEL +      +P      FE     ++ +  E   +    L       P
Sbjct: 469 GWQYDIVCNGIELSSGAIRNHEPAIMFKAFEIAGYSRETVETEFAGM----LRAFQFGAP 524

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 525 PHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 69/200 (34%), Gaps = 19/200 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + +S+R   V   F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEG---ARDFVVPSRLN--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
                    +    E    ++F       +  S    I   E+  +Y N   DL T+L+ 
Sbjct: 245 -----EQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFRESMLKYGNDKPDLRTSLEL 299

Query: 189 PDQPDRHLLYLQAQQAGIRV 208
            D  D          AG  V
Sbjct: 300 VDITDVFEASEFKAFAGKHV 319


>gi|256001966|gb|ACU52307.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001968|gb|ACU52308.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001970|gb|ACU52309.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001974|gb|ACU52311.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001976|gb|ACU52312.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001978|gb|ACU52313.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001982|gb|ACU52315.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
 gi|256001984|gb|ACU52316.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
          Length = 192

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 72/173 (41%), Gaps = 9/173 (5%)

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
                        +  +    +T+ E+ + Y  +D+    D+  +          ++  +
Sbjct: 26  VQYSHLKSGPQVVDFKAPWIRMTMKESISVYGGVDVDLHADHELRKILETQTSLPEKTYV 85

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELY 265
             +  +  + +F  ++ +K      +     +  +P   + L     + D    +RFE +
Sbjct: 86  HASRGELIALLFDELVCDK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESF 139

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEM 316
               ELCNA  EL DP++QR   E++M++K     +E +P+DE+FL  L   M
Sbjct: 140 CLGKELCNAYSELNDPLQQRKLLEEQMRKKALNPDSEYHPVDEEFLEALCQGM 192


>gi|225679790|gb|EEH18074.1| aspartyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 578

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 14/135 (10%)

Query: 227 EPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P             +          ++L    +EL      +   
Sbjct: 424 EPGQGGAAGITSTHHPFTAPLHESDISLLLTDPTKVVADHYDLVLNGVELGGGSRRIHSA 483

Query: 282 IEQRHRFEKEMQE-KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
             Q       ++   +++ +  +      L  L    P  +GIA+GFDRLV ++ G  ++
Sbjct: 484 AVQDFILRDILKMPAERLADFAH-----LLEALRAGCPPHAGIALGFDRLVAVMLGRESV 538

Query: 340 NEVIWTPFSQSNQEE 354
            +VI  P  +S + E
Sbjct: 539 RDVIAFP--KSGKGE 551



 Score = 76.6 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 69/182 (37%), Gaps = 17/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R   ++ LRE   + Q  F+EI++  L + +P      R F      +      
Sbjct: 108 RGALQFRARARNVLRETLEDFQPPFLEIETPLLFKSTPEG---AREFLVPTRRR---GLA 161

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 162 YALPQSPQQYKQILMASGIHRYYQFARCFRDEDLRADRQPEFTQLDLEMSFAT------- 214

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E A +++++               T   A A+Y +      +    +   H
Sbjct: 215 -GEDVMKIIEAAMKRLWTTLMRAPLTPESFPRTTYENAMAKYGSDKPDVRIGMEIKRIEH 273

Query: 196 LL 197
           ++
Sbjct: 274 MI 275


>gi|114800235|ref|YP_760952.1| aspartyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123027890|sp|Q0BZZ1|SYD_HYPNA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|114740409|gb|ABI78534.1| aspartyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 609

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 67/206 (32%), Gaps = 25/206 (12%)

Query: 3   QIPS--QPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P      +  +   + R            ++ R+ + +SLR   V   F E  +  L 
Sbjct: 111 PMPVFGDHSYPEEIRLKHRYLDLRREQLHKNMVLRSQVIASLRRRMVAEGFTEYQTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     +        Y L  +P+   + L+ +G ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRLH---PGEFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E +      ++R   E                     +
Sbjct: 225 ARADRSPGEFYQLDIEMSFVTQEDVFNSIEPVMRGVFEEFAD---WEGKGRKVAEGPFVH 281

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPD 193
           I  AEA  +Y  +D     +     D
Sbjct: 282 IPYAEAMLKY-GVDKPDLRNPILCSD 306



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 19/156 (12%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP----APESALANIYPADPR 257
           ++ GI       +  I    + E  E N  ++        P        A   +      
Sbjct: 428 EELGIIEPGVFRFCWIVDFPMYEWDEDNKKVDFSHNPFSMPQGGMEALLAADTVEKQLDL 487

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLA 311
              ++++    +EL +       P      FE      + ++ K       +        
Sbjct: 488 KAFQYDIVCNGVELSSGAIRNHRPEVMLKAFELAGYGPEVVEAKFGGMLNAF-------- 539

Query: 312 CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                P   GIA G DR+VML+   +++ +VI  P 
Sbjct: 540 -RYGAPPHGGIAPGVDRIVMLLAETDSLRDVILFPM 574


>gi|115742929|ref|XP_001201004.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115911567|ref|XP_793329.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 441

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 72/254 (28%), Gaps = 33/254 (12%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R                  +    R    +  F+E+    +  +  +E     F
Sbjct: 208 DVRLDNRVLDLRTTTNQAIFRLEAGVVQEFRAAMKKRDFVELQIPKIISAA-SEGGANVF 266

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
           +      +      YL  SP+   +  +AA  E++F     +R  +     H  EF  L+
Sbjct: 267 TVSYFKNNA-----YLAQSPQLYKQMGIAADFERVFTIGAVFRAEDSNTHRHLCEFVGLD 321

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              A + +                     +      +        + T  +   R    +
Sbjct: 322 MEMAFKYHYHEAL---------------DVIGSVFNDIFRGLRDNFQTEIQTVRRQFPSE 366

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               LD P + +        + AGI +   +  S    + L   ++     +   ILD++
Sbjct: 367 DFKFLDPPLRLEWPEGIKMLRDAGIEIDDLEDLSTPNEKFLGRLVKEKYDTD-FYILDKF 425

Query: 242 PAPESALANIYPAD 255
           P        +   +
Sbjct: 426 PLCIRPFYTMPDPN 439


>gi|302543884|ref|ZP_07296226.1| aspartate-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461502|gb|EFL24595.1| aspartate-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 605

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 58/172 (33%), Gaps = 15/172 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R+ + S++R+      F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRSAVISAIRQKMTAQGFNEMATPILSATSPEG---ARDFLVPSRLH--A 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GKFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
                   +    E    ++F       +  S    I   +A  +Y +    
Sbjct: 245 ----EQEDVFEVIEKVMTELFEEFGNGRHVTSPFPRIPFRQAMLKYGSDKPD 292



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 51/165 (30%), Gaps = 15/165 (9%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++ G    +   +  I    + E+ E    I         P            
Sbjct: 405 AVRVEAAKRTGHFEENVFRFCWIVDFPMFERNEDTGEIEFSHNPFSMPQGGLDALENQDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF-----EKEMQEKKKIYNETYPIDEDF 309
                 ++++     EL +      +P      F      ++  E++             
Sbjct: 465 LDILAWQYDIVCNGTELSSGAIRNHEPDVMFKAFGIAGYSRDEVEREFGGM--------- 515

Query: 310 LACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L       P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 516 LRAFHFGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560


>gi|145633224|ref|ZP_01788955.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986070|gb|EDJ92660.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 383

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 74/262 (28%), Gaps = 33/262 (12%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +    +  +   F +     V   
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAE----RKDDLQFFEKHVDKDVITR 300

Query: 174 FARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              + N D         Q D         ++G +     +W    S      +      +
Sbjct: 301 LENFVNSDFA-------QIDYTDAIDVLLKSGKKFEFPVSWGIDLSSEHERFLAEEYFKS 353

Query: 234 CCTILDRYPAPESALANIYPAD 255
              +   YP    A       D
Sbjct: 354 PVVVK-NYPKDIKAFYMRLNDD 374


>gi|195551041|ref|XP_002076152.1| GD12030 [Drosophila simulans]
 gi|194201801|gb|EDX15377.1| GD12030 [Drosophila simulans]
          Length = 299

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 60/210 (28%), Gaps = 38/210 (18%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDI----FSRI 221
               V E   +    D+ T +   D+ D     L     G +V        I       +
Sbjct: 58  PTKDVQEKLGKLLGEDVATEV--ADKFDLEENDLLFLGIGSKVETRALLGRIRLDYQDFL 115

Query: 222 LIEKIEPNLGINCCTILDRYPAPES------------ALANIYPADPRF----------- 258
           +               +  +P  E                  +  D              
Sbjct: 116 VENAKTKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLENFATSCENLESI 175

Query: 259 -TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
            ++ ++L     E+      + D   Q    E+ ++         +      L+ L    
Sbjct: 176 RSQAYDLVLNGQEVGGGSIRIHDRDMQHFILEQILKI-------PHDHLSHLLSALESGC 228

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           P   GIA+G DRL+ ++  A +I +VI  P
Sbjct: 229 PPHGGIALGLDRLIAILCRARSIRDVIAFP 258


>gi|268325212|emb|CBH38800.1| aspartyl-tRNA synthetase, mid part [uncultured archaeon]
          Length = 147

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 9/116 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHIRAFSTELIIQDHI 72
              R +   + R++   ++R++F E   IEI++   +  +    T +   S       + 
Sbjct: 35  RTERTKHIFMIRSLTLKAIRDFFDERGLIEINTPKIVSAATEGGTALFPIS-------YF 87

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHE 127
            +  +L  SP+   + L+A+G ++++  A  +R  E     H  E T ++   A  
Sbjct: 88  EREAFLNQSPQLYKQILMASGFDRVYEIAPIFRAEEHDTTKHLNEATSVDVELAFV 143


>gi|255656227|ref|ZP_05401636.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-23m63]
          Length = 171

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 15/157 (9%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                  ++G    +   W           I   +  NC   +  YP    A       D
Sbjct: 20  KAVELLIESGHDFEYPVEWGCDLQTEHERYITEQI-YNCPVFVTDYPKDIKAFYMRMNED 78

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT- 314
            +  +  +L    +              QR   E  + ++    NE    +ED+   L  
Sbjct: 79  GKTVRAMDLLVPGVGEIVGGS-------QREEREDVLLDRI---NEMGLREEDYWWYLEL 128

Query: 315 ---EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   SG  +GF+R++M +TG +NI +VI  P +
Sbjct: 129 RKFGTATHSGFGLGFERIIMYMTGMSNIRDVIPFPRT 165


>gi|87199359|ref|YP_496616.1| aspartyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
 gi|97196761|sp|Q2G8P1|SYD_NOVAD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|87135040|gb|ABD25782.1| aspartyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 593

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 65/197 (32%), Gaps = 24/197 (12%)

Query: 15  HYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
            YR    RR  L    +KR  + S +R       F E  +  L   SP      R F   
Sbjct: 127 RYRFLDLRRETLHANIVKRTKVISDMRRRMEGAGFTEYSTPILTASSPEG---ARDFLVP 183

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             I        Y L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L+  
Sbjct: 184 SRIH---PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E++ +    +I    E               P      I  AEA  +Y   D  
Sbjct: 241 MSFVTQEEVWETMEPVIGGVFEAFAD------GRKVTPIGSFPRIPYAEAMLKY-GSDKP 293

Query: 184 TTLDNPDQPDRHLLYLQ 200
              +     D    + Q
Sbjct: 294 DLRNPIIISDVSEEFAQ 310



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 49/160 (30%), Gaps = 17/160 (10%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A Q G+          I      E  E N  +         P       N          
Sbjct: 417 ADQLGLIDKDRFELCWIVDFPFYEWDEENKKVEFSHNPFSMPQGGLDALNTQDPLTINAF 476

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL- 313
           +++L     E+ +       P      FE       +++E+                   
Sbjct: 477 QYDLVCNGFEIASGSIRNQSPETMVKAFEIVGLSKADVEERFGG----------LYRAFQ 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G+A G DR+VML+ GA N+ E+   P +Q  ++
Sbjct: 527 YGAPPHGGMAAGVDRIVMLICGAQNLREITLFPMNQRAED 566


>gi|296436075|gb|ADH18249.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296437003|gb|ADH19173.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437936|gb|ADH20097.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140436|gb|ADH97194.1| aspartyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 582

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 56/161 (34%), Gaps = 18/161 (11%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDHIRKPLY 77
             L+ R+ +  + R+Y  E  F E+ +  L + +P     ++            + +   
Sbjct: 142 DRLMCRHKVMLACRQYLDEQGFTEVVTPILGKSTPEGARDYLVPSRIYPGNFYALPQ--- 198

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
              SP+   + L+  G ++ F  A  +R+ +     QPEFT ++   +    E L     
Sbjct: 199 ---SPQLFKQILMVGGLDRYFQIATCFRDEDLRADRQPEFTQIDMEMSFGGPEDLFPVVE 255

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++     V                +    +T  EA   Y 
Sbjct: 256 ELVARLFAVKG----------IELKAPFLRMTYQEAKDSYG 286



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 13/134 (9%)

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             +    +         P  E             +  ++L     E+ +    + +P  Q
Sbjct: 436 FAKEEGELCPEHHPFTAPLDEDISLLDSDPFAVRSSSYDLVLNGYEIASGSQRIHNPDLQ 495

Query: 285 RHRFE----KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNI 339
              F      +   K+K           F+  L+   P   GIA+G DR++M++T A  I
Sbjct: 496 NKIFALLKLSQESVKEKFG--------FFIDALSFGTPPHLGIALGLDRIMMVLTRAETI 547

Query: 340 NEVIWTPFSQSNQE 353
            EVI  P +Q   +
Sbjct: 548 REVIAFPKTQKAGD 561


>gi|76156709|gb|AAX27860.2| SJCHGC04622 protein [Schistosoma japonicum]
          Length = 180

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 11/182 (6%)

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
           T  +   R    +    L    +          Q AG  +   D  +    + L + I+ 
Sbjct: 2   TEIQTICRQYYFEPFEFLQPTLRLQYREAIRMLQSAGWEIGDLDDLNTSAEKFLGKLIKE 61

Query: 229 NLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
               +   ILD++P    +     +P D  ++  ++ +    E+      + DP+    R
Sbjct: 62  KYPPD-FYILDKFPLDIRAFYTMPHPTDKGYSNSYDFFMRGKEIMFGAQRIHDPVFLAER 120

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                    K+  E     + ++       P  +G  +G +R+ ML  G +NI +    P
Sbjct: 121 -----ATHHKVDLEKI---KAYIDAFRYGCPPHAGGGIGLERVTMLFLGLDNIRKTSMFP 172

Query: 347 FS 348
             
Sbjct: 173 RD 174


>gi|83944314|ref|ZP_00956769.1| aspartyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83844858|gb|EAP82740.1| aspartyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 616

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 65/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  ++ R+ + SS+R+   +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKMQDNMVLRSDVVSSIRKRMWDQNFKEFQTPIITASSPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G +K F  A  +R+ +      P +F  L+   +    +
Sbjct: 188 PGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVEQQ 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      ++    E         Q      + +      ++       I +    D+  
Sbjct: 248 DVFDTIQPVLTGIFEEFGGGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQVVSDHFR 307

Query: 191 QPDRHLLYLQAQQAGIRV 208
                +     +Q G  +
Sbjct: 308 DSGFAIFAKLLEQEGTEI 325



 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 16/157 (10%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G+   +   ++ I    + EK E    I+        P          P +     ++
Sbjct: 445 ELGLTDENRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALMGDPLEV-LGYQY 503

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEM 316
           +L     EL +       P      FE      +E++++       +             
Sbjct: 504 DLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQ---------YGA 554

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 555 PPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAED 591


>gi|296117812|ref|ZP_06836395.1| aspartate--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969043|gb|EFG82285.1| aspartate--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 618

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 241 YPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
           + +P+    + +  +P       +++     E+      + +   Q+  F          
Sbjct: 471 FTSPKPEWLDSFDDNPGEATAYAYDIVCNGNEIGGGSIRIHNAEVQKRVFNVMGI----G 526

Query: 299 YNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             E        L       P   GIA G+DR+V L+ G ++I +VI  P
Sbjct: 527 EEEAQEKFGFLLDAFQYGAPPHGGIAFGWDRIVSLLGGFDSIRDVIAFP 575



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 16/165 (9%)

Query: 36  FVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
              ++F EI++ +L   +P      R F     +         L  SP+   + L+ AG 
Sbjct: 171 LDNHEFTEIETPTLTRSTPEGA---RDFLVPARL--KPGSWYALPQSPQLFKQLLMVAGM 225

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
           E+ +  A  +R+ +     QPEFT L+   +    E ++     II    ++   +I + 
Sbjct: 226 ERYYQLARCYRDEDFRADRQPEFTQLDVEMSFVDQEDVIALGEEIIAELWKLIGYEITT- 284

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
                        +T A+A   Y +       D            
Sbjct: 285 ---------PIPRMTYADAMKYYGSDKPDLRFDIKLVECTDFFKD 320


>gi|229815946|ref|ZP_04446269.1| hypothetical protein COLINT_03001 [Collinsella intestinalis DSM
           13280]
 gi|229808499|gb|EEP44278.1| hypothetical protein COLINT_03001 [Collinsella intestinalis DSM
           13280]
          Length = 598

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 45/158 (28%), Gaps = 14/158 (8%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A    +     +    +   +     E                 E  L +  P       
Sbjct: 428 ADALNVPREGHEFLWVVNFPLFHWDEEGQRYEAEHQPFTLPHVDELHLLDEDPLKMGSC- 486

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFE----KEMQEKKKIYNETYPIDEDFLACLT-E 315
            ++      E       + D   Q    E     E + + +            +  L   
Sbjct: 487 TYDFVMDGFEAGGGGMRIHDAELQLKMLEFMGFSEERARAQFG--------FLMEALEFG 538

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A+G DR+ ML+ G ++I +V+  P + S  +
Sbjct: 539 APPMGGFALGLDRVCMLLAGTDSIRDVMAFPKTSSGSD 576



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 29/193 (15%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRA 61
           D   R R            L  R+    ++R    +  F E+++ +L + +P      R 
Sbjct: 137 DTRLRYRYLDLRRPEMAARLRLRSDFTFAIRSALHDRAFTEVETPALFKSTPEG---ARD 193

Query: 62  FSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
           F     +Q       Y L  SP+   + L+  G E+ +  A  +R+ +     QPEFT +
Sbjct: 194 FVVPSRLQ---PGSFYALPQSPQLLKQLLMVGGVERYYQVAKCFRDEDLRADRQPEFTQV 250

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +    + +M    +++  A      ++ +              ++  +A   Y   
Sbjct: 251 DIEMSFVEQDDVMAQLEDVLSDAFARVGVEMPT----------PLRRLSYWDAMDTY-GS 299

Query: 181 DLGTTLDNPDQPD 193
           D   T    +  D
Sbjct: 300 DKPDTRYGMELVD 312


>gi|83953355|ref|ZP_00962077.1| aspartyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83842323|gb|EAP81491.1| aspartyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 616

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 65/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  ++ R+ + SS+R+   +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKMQDNMVLRSDVVSSIRKRMWDQNFKEFQTPIITASSPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G +K F  A  +R+ +      P +F  L+   +    +
Sbjct: 188 PGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVEQQ 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      ++    E         Q      + +      ++       I +    D+  
Sbjct: 248 DVFDTIQPVLTGIFEEFGGGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQVVSDHFR 307

Query: 191 QPDRHLLYLQAQQAGIRV 208
                +     +Q G  +
Sbjct: 308 DSGFAIFAKLLEQEGTEI 325



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 16/157 (10%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G+   +   ++ I    + EK E    I+        P          P +     ++
Sbjct: 445 ELGLTDENRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALMGDPLEV-LGYQY 503

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEM 316
           +L     EL +       P      FE       E++++       +             
Sbjct: 504 DLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKDEVEKRFGGMVNAFQ---------YGA 554

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 555 PPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAED 591


>gi|294013277|ref|YP_003546737.1| aspartyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292676607|dbj|BAI98125.1| aspartyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 594

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 61/195 (31%), Gaps = 24/195 (12%)

Query: 15  HYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
            YR    RR  L    +KR  I S +R       F E  +  L   SP      R F   
Sbjct: 127 RYRFLDLRRETLHANIVKRTKIISDMRRRMEGAGFTEYSTPILTASSPEG---ARDFLVP 183

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             I        Y L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L+  
Sbjct: 184 SRIH---PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +    E +      +I    E               P      I  AEA  +Y   D  
Sbjct: 241 MSFVRQEDVWNTMEPVIAEVFEAFAD------GKPVTPAGSFPRIPHAEAMLKY-GSDKP 293

Query: 184 TTLDNPDQPDRHLLY 198
              +     D    +
Sbjct: 294 DLRNPILITDVTEHF 308



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 11/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           +Q  +          I      E  E    I+        P                  +
Sbjct: 418 EQLDLIDRDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMPQGGLDALENQDPLSLKAYQ 477

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           +++     E+ +       P       E  ++  +K+      ++E F           P
Sbjct: 478 YDMVCNGYEIASGSIRNQSP-------ELMVKAFEKVGLSQADVEERFGGLYRAFQYGAP 530

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G+A G DR+VML+ GA N+ E+   P +Q  ++
Sbjct: 531 PHGGMAAGVDRIVMLLCGAQNLREITLFPMNQRAED 566


>gi|322787451|gb|EFZ13539.1| hypothetical protein SINV_06357 [Solenopsis invicta]
          Length = 539

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 107/358 (29%), Gaps = 68/358 (18%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
             D     R  +++          R+++  + R+++ +  + E+   +L      G  T 
Sbjct: 222 LPDVQLDNRHIMIRGENTSRILMMRSVLTQAFRDHYKDRGYYEVTPPTLVQTQVEGGST- 280

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE-F 117
                  L   D+      +        K      E  I    H  ++ ++  +  P  +
Sbjct: 281 -------LFKLDYFGVLNCI-------LKHAFQQWEMYIVLLNHIGQSSQEHVVTLPSSY 326

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++++L+    ++I    E   Q   S      NP  +             
Sbjct: 327 THIEAECPFITFDELLDRLEDLICDVVERVLQSPLSHLVKELNPNFQVPKKPF------- 379

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
                   ++  D  +        ++ G      +   ++  R +         IN   +
Sbjct: 380 ------KRMNYSDAIEYLRENNITKEDGSFYEFGEDIPEMPERKM------TDAINEPIM 427

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFEL-------YACNIELCNACDELLDPIEQRHRFE 289
           L R+PA   S   +  P D R T+  ++                  DEL++         
Sbjct: 428 LCRFPAEIKSFYMSRCPEDKRLTESVDILLPNVGEIVGGSMRTWKYDELMEGYN------ 481

Query: 290 KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                ++ I    Y    D    +       G  +G +R +  +    +I EV   P 
Sbjct: 482 -----RENIDPTPYYWYTD--QRMYGSCPHGGYGLGLERFLCWLLNRFHIREVCLYPR 532


>gi|154247069|ref|YP_001418027.1| aspartyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|238686728|sp|A7IK27|SYD_XANP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|154161154|gb|ABS68370.1| aspartyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 623

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 31/192 (16%)

Query: 4   IPSQPWWN----RDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +     +   R      RR  L    + R  I  ++R       F E  +  L
Sbjct: 110 LPLPVFGDVEYPEETRLRYRFLDLRREKLHRNIMTRGAIIDAMRSRMKGQGFFEFQTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     +        Y L  +P+   + ++ +G ++ F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRLH---PGKFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P EF  L+   +              I  A E     +F           +  
Sbjct: 224 DPRADRLPGEFYQLDLEMSFV--------EQEDIFAAVEPVITGVFEQFAEGKPVTQKWP 275

Query: 167 YITVAEAFARYA 178
            I  AE+  +Y 
Sbjct: 276 RIPYAESLRKYG 287



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 52/150 (34%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E    ++        P  +  L  +   DP   K 
Sbjct: 449 EELNLVDKDRFELAWIVDFPFYEYSEEEKKVDFSHNPFSMP--QGGLDALNTQDPLSIKA 506

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           F+        CN   E+     + HR E  ++  +    +   ++E F           P
Sbjct: 507 FQY----DIACNGY-EIASGGIRNHRPEAMVKAFEIAGYDAQTVEERFGGMYRAFQYGAP 561

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR+VML+ G  N+ E+   P 
Sbjct: 562 PHGGMAAGVDRIVMLLCGVTNLREISLFPM 591


>gi|1333771|emb|CAA83727.1| Lys-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 58

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 309 FLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
            +  L   MP ++GI +G DRLVML+T  ++I +V+  P  +  +
Sbjct: 14  LVEALEHAMPPTAGIGIGIDRLVMLLTNCDSIKDVLLFPQMKPKE 58


>gi|302552795|ref|ZP_07305137.1| aspartyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
 gi|302470413|gb|EFL33506.1| aspartyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736]
          Length = 587

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 56/163 (34%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A++AG    +   +  I    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRAGHFEENVFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALESQDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    +EL +      +P      FE         Y+    ++E F   L 
Sbjct: 465 LDILGWQYDIVCNGVELSSGAIRNHEPEIMLKAFEI------AGYD-RDTVEEKFAGMLR 517

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 518 AFRFGAPPHGGIAPGVDRIVMLLADEPNIRETISFPLNGNAQD 560



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 65/199 (32%), Gaps = 17/199 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    ++ R  + S++R       F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILSATSPEG---ARDFVVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDIEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDNP 189
                   +    E    ++F       +  S    I   EA  +Y +   DL   L+  
Sbjct: 245 ----EQEDVFQPVEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV 300

Query: 190 DQPDRHLLYLQAQQAGIRV 208
           D  D          AG  V
Sbjct: 301 DITDIFEGSEFKAFAGKHV 319


>gi|226291546|gb|EEH46974.1| aspartyl-tRNA synthetase, mitochondrial [Paracoccidioides
           brasiliensis Pb18]
          Length = 703

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 14/135 (10%)

Query: 227 EPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P             +          ++L    +EL      +   
Sbjct: 549 EPGQGGAAGITSTHHPFTAPLHESDISLLLTDPTKVVADHYDLVLNGVELGGGSRRIHSA 608

Query: 282 IEQRHRFEKEMQE-KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
             Q       ++   +++ +  +      L  L    P  +GIA+GFDRLV ++ G  ++
Sbjct: 609 AVQDFILRDILKMPVERLADFAH-----LLEALRAGCPPHAGIALGFDRLVAVMLGRESV 663

Query: 340 NEVIWTPFSQSNQEE 354
            +VI  P  +S + E
Sbjct: 664 RDVIAFP--KSGKGE 676



 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 69/182 (37%), Gaps = 17/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R   ++ LRE   + Q  F+EI++  L + +P      R F      +      
Sbjct: 233 RGALQFRARARNVLRETLEDFQPPFLEIETPLLFKSTPEG---AREFLVPTRRR---GLA 286

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 287 YALPQSPQQYKQILMASGIHRYYQFARCFRDEDLRADRQPEFTQLDLEMSFAT------- 339

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E A ++++S               T   A A+Y +      +    +   H
Sbjct: 340 -GEDVMKIIEAAMKRLWSTLMRAPLTPESFPRTTYENAMAKYGSDKPDVRIGMEIKRIEH 398

Query: 196 LL 197
           ++
Sbjct: 399 MI 400


>gi|29830938|ref|NP_825572.1| aspartyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|46577226|sp|Q82F68|SYD_STRAW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|29608051|dbj|BAC72107.1| putative aspartyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 587

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 65/200 (32%), Gaps = 19/200 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHI 72
              R    +L R  + S++R       F E+ +  L  + P      R F     +    
Sbjct: 134 RRERMHRNILLRTAVISAIRHKMTALGFNEMATPILSATSPEG---ARDFVVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN--IDLGTTLDN 188
                    +    E    ++F       +  S    I   EA  +Y +   DL   L+ 
Sbjct: 245 -----EQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLEL 299

Query: 189 PDQPDRHLLYLQAQQAGIRV 208
            D  D          AG  V
Sbjct: 300 VDITDIFEGSEFKAFAGKHV 319



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A+++G    +   +  I    + EK E    I+        P            
Sbjct: 405 AVRVEAAKRSGNFEENVFRFCWIVDFPMYEKDEDTGKIDFSHNPFSMPQGGLEALETQDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    +EL +      +P      FE         Y+    ++E F   L 
Sbjct: 465 LDILGWQYDIVCNGVELSSGAIRNHEPEIMLKAFEI------AGYD-RDTVEEQFAGMLR 517

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   GIA G DR+VML+    NI E I  P + + Q+
Sbjct: 518 AFRFGAPPHGGIAPGVDRIVMLLADEPNIRETIAFPLNGNAQD 560


>gi|332185155|ref|ZP_08386904.1| aspartyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332014879|gb|EGI56935.1| aspartyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 604

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 62/180 (34%), Gaps = 23/180 (12%)

Query: 15  HYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
            YR    RR  L    ++R  + + +R       F E  +  L   SP      R F   
Sbjct: 127 RYRFLDLRRETLHANIVRRTQVIADMRRRMETAGFTEYSTPILTASSPEGA---RDFLVP 183

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             I        Y L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L+  
Sbjct: 184 SRIH---PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE 240

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E++ +    +I    E               P  +   I  +E+  +Y N    
Sbjct: 241 MSFVTQEEVWETMEPVIGGIFEKF------ADGRTVTPIGQFPRIPYSESMLKYGNDKPD 294



 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 50/157 (31%), Gaps = 11/157 (7%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
           A+Q G+          I      E  E    +         P                  
Sbjct: 417 AEQLGLIEEGAFRLCWIVDFPFYEWDEDEKKVEFAHNPFSMPQGGMEALTSADPLSLKAY 476

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEM 316
           +++L     E+ +       P       E  +   +K+      ++E F           
Sbjct: 477 QYDLVCNGFEIASGSIRNQSP-------ELMVAAFEKVGLSKADVEERFGGLYRAFQYGA 529

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G+A G DR+VML+ GA N+ E+   P +Q  ++
Sbjct: 530 PPHGGMAAGVDRIVMLICGAQNLREISLFPMNQRAED 566


>gi|238916390|ref|YP_002929907.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238871750|gb|ACR71460.1| aspartyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 581

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 68/190 (35%), Gaps = 14/190 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + + +  ++ R+ + + LR+   +  F+EI +  L   SP      R +        + 
Sbjct: 132 RNQKVKDNMIFRSKVIAFLRQKMTDMGFLEIQTPILCASSPEG---ARDYIVPSRK--YK 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G +K F  A  +R+ +      P EF  L++  +  + E 
Sbjct: 187 GKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMSFATQED 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    ++         + +          +    I+  +A   +   D     +    
Sbjct: 247 VFRIGEEVLTETFAKFAPEGYEVTQ------APYPIISYKQAMLEF-GSDKPDLRNPLRI 299

Query: 192 PDRHLLYLQA 201
            D    + + 
Sbjct: 300 IDLSEFFNKC 309



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 54/180 (30%), Gaps = 13/180 (7%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D    + + +    +       + G R+   +  +  F  +    +              
Sbjct: 385 DTIFFIADKEDRAAYFAGQIRNELGERLDLIEKNAYRFCYVNDFPMFERDPETKKIGFTH 444

Query: 241 YPAPESA----LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            P           N          ++++    +EL +      D       FE       
Sbjct: 445 NPFSMPQGGLEALNTKDPLDILAYQYDIVCNGVELSSGAVRNHDMQIMVKAFEI------ 498

Query: 297 KIYNETYPIDED--FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             Y+E     +            P  +G+A G DR++ML+    NI E+I  P S + Q+
Sbjct: 499 AGYDEEVLKAKFGALYNAFQFGAPPHAGMAPGVDRMIMLLRNEENIREIIPFPMSGTAQD 558


>gi|255030603|ref|ZP_05302554.1| aspartyl-tRNA synthetase [Listeria monocytogenes LO28]
          Length = 267

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 47/129 (36%), Gaps = 8/129 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
                      R+ +  + R       F +I++  L   +P     ++            
Sbjct: 135 RRPEMNNIFKMRHTVTRTFRNKLDALGFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYA 194

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           + +      SP+   + L+ AG +K +     +R+ +     QPEFT ++   +  + E+
Sbjct: 195 LPQ------SPQILKQLLMTAGFDKYYQIVRCFRDEDLRGDRQPEFTQIDLETSFLTKEE 248

Query: 132 LMKDCMNII 140
           +     +++
Sbjct: 249 IQAITEDML 257


>gi|213027424|ref|ZP_03341871.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 179

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 46/158 (29%), Gaps = 11/158 (6%)

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           D        ++ G    +   W    S      +          +   YP    A     
Sbjct: 25  DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVK-NYPKEIKAFYMRL 83

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             D +             L     E++   ++  R +       ++       D  +   
Sbjct: 84  NEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDARMAEMGL--NKEDYWWYRD 135

Query: 313 L--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 136 LRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 173


>gi|46120751|ref|XP_385110.1| hypothetical protein FG04934.1 [Gibberella zeae PH-1]
          Length = 813

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/353 (10%), Positives = 85/353 (24%), Gaps = 59/353 (16%)

Query: 47  MSLQYSPGNETHIRAFSTELIIQDHIR--KPLYLQTSPEF--SCKKLLAAGEEKIFCFAH 102
             L   P                   +     Y    P+     K       E    F  
Sbjct: 442 PVLSEIPQGTRPADEPVAHTFTTLKFQDCISSYGSDKPDLRIPNKIHALPDLEPYKQFVS 501

Query: 103 AWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF 162
              + +       E                 +  +         +       +       
Sbjct: 502 MITHLD---DPLIEAFTFPLS---TEDPNEARKLVTKFMDNLPSSLADNPDGKPQILVCD 555

Query: 163 SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
            +      +     + ++      +  +Q D  +   + +  G   +      DI + + 
Sbjct: 556 RKAPLQGFSSLGFEFQDVIDLVAGEGVEQGDLVIFQAREKPKGQYCSGSTKIGDIRNALW 615

Query: 223 IEKIEP---------NLGINCCTILDRYPAP---------------ESALANIY------ 252
              +E          + G      +  +P                  +A  + +      
Sbjct: 616 KFLVEEGQMEKPRLGDPGSLQFVWVTDFPMFKPTEKGEPGQEGAAGIAASHHPFTAPLSK 675

Query: 253 --------PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKKIYNET 302
                         +  ++L    +E+    + +     Q+       +M +K+      
Sbjct: 676 TDLELLFTDPLQAKSAAYDLVLNGVEVGGGSERIHIATVQKFIMSDVLQMTDKRIAD--- 732

Query: 303 YPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
                     L    P  +G A+GFDRLV L+T    + +VI  P  ++ + E
Sbjct: 733 ---FAHLFEALESGCPPHAGFALGFDRLVALLTDTATVRDVIAFP--KTMKGE 780



 Score = 74.3 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 7/137 (5%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  +   FH   +  L  R+ ++  L +   E  F +I++ +L + +P      R F 
Sbjct: 290 PKKRHYQIRFHQELQERLKFRSWLKGELTKGLQEKGFTDIETPTLFKSTPEG---AREFL 346

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                +    K   L  SP+   + L+A+G  +   +A  +R+ +     QPEFT L+  
Sbjct: 347 VPTRQR---GKAYALNQSPQQYKQTLMASGISRYMQWARCFRDEDSRADRQPEFTQLDME 403

Query: 124 RAHESYEQLMKDCMNII 140
            +     ++ +D  +II
Sbjct: 404 WSFAGASKVRQDVNDII 420


>gi|325510972|gb|ADZ22608.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 353

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 81/263 (30%), Gaps = 31/263 (11%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            + R          I     E+ V+N F EI +  +              TEL    +  
Sbjct: 119 RNSRVNSVFKIETEIAHGFSEFLVKNGFTEIYTPKIVS--EGAEGG----TELFKLKYFD 172

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHE-SYEQ 131
           K  YL  SP+F  + ++AAG E++F   H +R        H  E+  ++           
Sbjct: 173 KEAYLAQSPQFYKQMMVAAGYERVFEIGHVYRAESHDTKRHLNEYISMDLEMGFINDEMD 232

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           L++  + +++   +   QK                             +++ T  + P  
Sbjct: 233 LIRFEIELLKYIFQNVRQKCSK--------------------SIELLKVEIPTIQEVPIM 272

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
           P  +      ++   +             ++   ++     +    L  Y   +  +  +
Sbjct: 273 P-LNEAITILREVYNKKELTTDIDHEGEELIGRFVKEKYNSD-FVFLTHYSKDKRPMYTM 330

Query: 252 YPADPRFTKRFELYACNIELCNA 274
            P     T  F+L    +E+   
Sbjct: 331 -PCGKNLTHSFDLIFRGMEITTG 352


>gi|297154360|gb|ADI04072.1| asparagine synthetase A [Streptomyces bingchenggensis BCW-1]
          Length = 339

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 62/355 (17%), Positives = 107/355 (30%), Gaps = 48/355 (13%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
             P +           R  LL ++ +    REY  +  F+E+        P  +   R  
Sbjct: 18  PQPHEHL----TSATTRNMLLIQSALLQGAREYLCDEGFVELLPPV--VGPVTDPGCR-- 69

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE----QGCLHQPEFT 118
             + +  D+  +   L TS  F  +  L A   KIF  A   R           H  EF 
Sbjct: 70  GAKQVDIDYYGRRYKLMTSVIFYKQAALLAH-PKIFYIAPCVRLEPFTTSSTLRHLTEFH 128

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++   A  S E++++ C  ++R A +                      I          
Sbjct: 129 QIDVEAADTSREEMLEICQGVVRGALQRV--------------------IKQLPYVLDEL 168

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             D G   D   Q    + ++   +   ++ H+              I           +
Sbjct: 169 GRDPGAFTDLLQQSFPSIRHMDVVETLHKLGHEQNPDGEIDWEGEALISRQH--TRPFFI 226

Query: 239 DRYPAPESALANI-YPADPRFTKRFELYAC--NIELCNACDELLDPIEQRHRFEKEMQEK 295
             YP       +      P   + F+L A     ELC+  +   D      R       +
Sbjct: 227 TDYPKGSRGFPDRESRTLPGRLRNFDLVAPEGYGELCSGSEREGDYTRVIER------MR 280

Query: 296 KKIYNETYPIDEDFLACLT--EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +   N      E +L       +PQS+G  +G  RL     G +++ +    P  
Sbjct: 281 ETGENPAKY--EWYLKTFKEGGIPQSAGFGLGAQRLTRYAAGLHSVWQASAFPKL 333


>gi|85705180|ref|ZP_01036280.1| aspartyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85670502|gb|EAQ25363.1| aspartyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 591

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 73/222 (32%), Gaps = 23/222 (10%)

Query: 4   IPSQPWWNRD----FHYR------RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P Q + +++       R      RR  + +    R+ + +++R    +  F E  +  +
Sbjct: 110 LPLQVFGDQEYPEETRLRFRYLDLRREAMQRNMVLRSDVVAAMRRRMWDRGFREFQTPII 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     +        Y L  +P+   + ++ +G +K F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRLH---PGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P +F  L+   +    + +      +I+   E          +     +++  
Sbjct: 224 DPRADRSPTDFYQLDLEMSFVEQQDVFDTIQPVIQGIFEEFGAGAVVDTDWPQISYADSA 283

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                +       I +    ++       +     +Q G  +
Sbjct: 284 LWYGTDKPDLRNPIKMQDVSEHFRGSGFAIFAKLLEQDGTEI 325



 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 55/156 (35%), Gaps = 12/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            + G+   +   ++ I    + E  E    ++        P       N  P        
Sbjct: 419 DELGLTDQNRFAFAWIVDFPMYEADENTGKVDFSHNPFSMPQGGIEALNGDPLK------ 472

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
             L       CN   EL+    + H+ +  ++  +        + + F   +       P
Sbjct: 473 -VLGYQYDLACNGY-ELVSGAIRNHKLDIMIKAFELAGYGEDEVRKRFGGMVNAFQYGAP 530

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G A G DR+VML+ G +NI EVI  P +Q  ++
Sbjct: 531 PHGGCAAGIDRIVMLLAGTSNIREVIMFPMNQRAED 566


>gi|289428129|ref|ZP_06429831.1| nucleic acid-binding domain protein [Propionibacterium acnes J165]
 gi|289158672|gb|EFD06874.1| nucleic acid-binding domain protein [Propionibacterium acnes J165]
          Length = 239

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 6/113 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
               +   L+ R+ +  ++RE    + F +I++ +L   +P      R F     +    
Sbjct: 132 RRPHQHEALVLRSHVTHAIREVLDRHNFYDIETPTLTRSTPEG---ARDFLVPARL--AP 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
                L  SP+   + L+ +G E+ +  A  +R+ +     QPEFT L+   +
Sbjct: 187 GCWYALPQSPQLFKQLLMVSGMERYYQIARCYRDEDFRADRQPEFTQLDVEMS 239


>gi|116251371|ref|YP_767209.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123081980|sp|Q1MIW0|SYD_RHIL3 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|115256019|emb|CAK07100.1| putative aspartyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 596

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 63/196 (32%), Gaps = 29/196 (14%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    +KR  + S++R       F E  +  L 
Sbjct: 111 PLPVFGEPDYPEDVRLKYRFLDLRRETLHRNIVKRTQVISAMRREMGNVGFTEYTTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRIH---PGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E +                  IF           E   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVTQEDVWNTMG--------PLMTSIFEEFAEGKPVTKEWPR 276

Query: 168 ITVAEAFARYANIDLG 183
           I   EA  +Y +    
Sbjct: 277 IPYDEAIRKYGSDKPD 292



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 48/163 (29%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +          I      E  E +  ++        P            
Sbjct: 413 EARTKAGEELNLVDRDRFELCWIVDFPFFEWSEEDKKVDFAHNPFSMPQGGLDALQNQDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 +++      E+ +       P       E  +   +K+      +++ F     
Sbjct: 473 LTIKAFQYDAVCNGFEIASGSIRNQSP-------ETMVAAFEKVGLSQQDVEDRFGGLYR 525

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G A G DR+VML+ GA N+ E+   P +Q  Q+
Sbjct: 526 AFQYGAPPHGGAAFGIDRIVMLLVGAKNLREISLFPMNQQAQD 568


>gi|307195778|gb|EFN77592.1| Aspartyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
          Length = 557

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 9/159 (5%)

Query: 22  LLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+     +RE+ +    F++I++ +L +Y+PG       F               L 
Sbjct: 110 LRMRSQFIMKMREFLINECNFVDIETPTLFKYTPGGAQE---FIVPTRQPGKF---YSLV 163

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+    ++ F  A  +R+       QPEFT L+   +      ++    N+
Sbjct: 164 QSPQQFKQLLMVGSFDRYFQVARCYRDETARHDRQPEFTQLDIEMSFVDQNGVINLVENL 223

Query: 140 IRC-AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           +     E        F+++      E       +    Y
Sbjct: 224 LVYSWPEELGSIEIPFKHITYKDAMELYGTEQPDLRIPY 262



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 38/117 (32%), Gaps = 21/117 (17%)

Query: 239 DRYPAPESALANI----YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
             +P  +  L +I              ++L     E+      + D   QR         
Sbjct: 417 THHPFTQPHLDDIGYLANDPLKVRGLHYDLVMNGSEIAGGSIRIHDANLQRQILNLLN-- 474

Query: 295 KKKIYNETYPIDE----DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                     IDE      L  L    P   GIA+G DRLV ++  A NI  VI  P
Sbjct: 475 ----------IDETNLSHMLEALTYGAPPHGGIALGLDRLVCMLCNAKNIKSVIAFP 521


>gi|188583675|ref|YP_001927120.1| aspartyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|238692885|sp|B1ZFX6|SYD_METPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|179347173|gb|ACB82585.1| aspartyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 604

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 62/183 (33%), Gaps = 18/183 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    ++KR  I  SLR    E  F E  +  L   SP     ++            
Sbjct: 134 RREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEGARDYLVPSRVHPGKFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   +  + AG ++ F  A  +R+ +      P EF  L+   +  + E
Sbjct: 194 LPQ------APQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVTQE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            + +    ++R         +F           E   IT A+A  +Y  +D     +   
Sbjct: 248 DVFQAVEPVLRG--------VFEEFANGKRVTKEFPRITYADAMLKY-GVDKPDLRNPLI 298

Query: 191 QPD 193
             D
Sbjct: 299 IAD 301



 Score = 75.8 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 11/99 (11%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT- 314
             ++++    IEL +       P      F      +         ++E F   L  L  
Sbjct: 485 AFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRD-------VLEEKFGGMLNALRL 537

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   GIA G DR+VML+    NI EV+  P +Q  ++
Sbjct: 538 GAPPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAED 576


>gi|213408891|ref|XP_002175216.1| aspartyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212003263|gb|EEB08923.1| aspartyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 591

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 77/215 (35%), Gaps = 30/215 (13%)

Query: 3   QIPSQPW----------WNRDFHYRR---RPFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
            +P  P            +R  + R    +  L  R+ +   +  +F E++F E+++  L
Sbjct: 109 PLPFNPLQPPSNILTCLRHRHLYLRSPLMQKNLRLRSELSYQIHSFFHEHEFCEVETPLL 168

Query: 50  -QYSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            + +P      R F        H     Y L  SP+   + L+A+G  + + FA  +R+ 
Sbjct: 169 FKSTPEG---AREFLVPSR---HDPGCFYALTQSPQQIKQTLMASGFHRYYQFARCFRDE 222

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +     Q EFT ++   A     + +   +  +           F ++ V          
Sbjct: 223 DLRADRQIEFTQIDMEMAFVYNREQVMSVVEALI---------RFLWKRVLGLELKSFPR 273

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
           +T  EA ARY         D   +    +L L  Q
Sbjct: 274 LTYKEALARYGTDKPDLRHDTSFKCLNEILQLNLQ 308



 Score = 86.2 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 45/124 (36%), Gaps = 5/124 (4%)

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                      +P     L    P D R    ++L    IEL      + D  +Q     
Sbjct: 446 WKATHHPFTAPHPEDI-HLLQNNPLDAR-ALSYDLVVNGIELGGGSIRIHDYQQQYEILR 503

Query: 290 KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
             ++       E    +  F    +  P   G A+G+DRLV L+ G  +I +VI  P + 
Sbjct: 504 DVLKL---TDTEIRSFEHLFTILRSGCPPHGGFALGYDRLVALMAGCRDIRDVIAFPKTA 560

Query: 350 SNQE 353
           S ++
Sbjct: 561 SGKD 564


>gi|254450036|ref|ZP_05063473.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198264442|gb|EDY88712.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 667

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 65/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  +  R+ + SS+R+   +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKMQKNMKLRSDVVSSMRKRMWDKGFREFQTPIITSSSPEG---ARDFLIPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +    +
Sbjct: 188 PGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVEQQ 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      +I    E   +     Q      + +      ++       I +    ++  
Sbjct: 248 DVFDTIQPVITGIFEEFGKGRKVDQMWEQISYRDAALWYGSDKPDLRNPIKMQVVSEHFR 307

Query: 191 QPDRHLLYLQAQQAGIRV 208
                +     +Q G  V
Sbjct: 308 GSGFAIFAKLLEQDGTEV 325



 Score = 76.2 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 12/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            + G+   +   +  I    + E+      I+        P    A  +  P D      
Sbjct: 494 DELGLTDLNRFAFVWIVDFPIYERDAETGKIDFEHNPFSMPQGGMAALDGKPED------ 547

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
             L       CN   EL+    + HR E   +  +        +++ F   +       P
Sbjct: 548 -VLGFQYDLACNGY-ELVSGAIRNHRPEIMFKAFEIAGYGKDEVEKRFGGMVNAFQYGAP 605

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G A G DR+VML+  A+N+ +VI  P +Q  ++
Sbjct: 606 PHGGCAAGVDRIVMLLADADNLRDVIMFPMNQRAED 641


>gi|171687687|ref|XP_001908784.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943805|emb|CAP69457.1| unnamed protein product [Podospora anserina S mat+]
          Length = 481

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 70/196 (35%), Gaps = 29/196 (14%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLY 77
           +  +  R  I   LR+   +  F E+++  L + +P      R F               
Sbjct: 215 QARIRARPKIGHELRKSLTDLNFTEVETPILFKSTPEG---AREFLVPTR---RAGLAYA 268

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+++G    + FA  +R+ +     QPEFT L+   +  + + +M+   
Sbjct: 269 LPQSPQQYKQILMSSGIRGYYQFARCFRDEDLRADRQPEFTQLDLEMSFATGQDVMRTVE 328

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFS---------------------EPEYITVAEAFAR 176
           +I++   +  N +    Q+     +                          IT  EA +R
Sbjct: 329 SIMKDLMKSLNSQFELVQSDTKERYPVPRRTPPSSDPSSNPWPVSDKPFPRITYEEAMSR 388

Query: 177 YANIDLGTTLDNPDQP 192
           +  +D   T    +  
Sbjct: 389 F-GVDKPDTRIPFEIT 403


>gi|260201700|ref|ZP_05769191.1| aspartyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289444109|ref|ZP_06433853.1| predicted protein [Mycobacterium tuberculosis T46]
 gi|289417028|gb|EFD14268.1| predicted protein [Mycobacterium tuberculosis T46]
          Length = 294

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 69/236 (29%), Gaps = 30/236 (12%)

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                     R  A V   +  +         +E E   +A+        D       P 
Sbjct: 33  WQDWAKQRGHRGLAYVLVAEDGTLGGPVAKNLTEAERTGLADHVGAKPG-DCIFFSAGPV 91

Query: 191 QPDRHLL----YLQAQQAGIRVAHDDTWSDIFSR-ILIEKIEPN------LGINCCTILD 239
           +  R LL       A + G+       +  +    +     E        +G    T + 
Sbjct: 92  KSSRALLGAARVEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVH 151

Query: 240 R-YPAPESALANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRF------EK 290
             + AP+    +   +D        +++     E+      +     Q   F      + 
Sbjct: 152 HAFTAPKPEWEDRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKA 211

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E +EK     E +             P   GIA G+DR   L+ G ++I EVI  P
Sbjct: 212 EAEEKFGFLLEAFMF---------GAPPHGGIAFGWDRTTALLAGMDSIREVIAFP 258


>gi|321310937|ref|YP_004193266.1| aspartyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319802781|emb|CBY93427.1| aspartyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 556

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 14/149 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++   ++  +  ++ I    L E  E          L   PA  S            +  
Sbjct: 402 KRPKAQLEQEYKFAWIVDWPLFEYNELQGKWVVAHHLFTKPASGSVGF---DIKGERSMG 458

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE---DFLACL-TEMP 317
           ++L    +EL +  +   D   Q + F             T  I++    FL      +P
Sbjct: 459 YDLVLNGVELASGSERNNDLDVQNYIF-------SLAGLSTQEIEDNFGWFLEAFNYGVP 511

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              GIA+G DRLV ++ G ++I EVI  P
Sbjct: 512 PHMGIAIGVDRLVQMILGVSSIREVIAFP 540



 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 72/227 (31%), Gaps = 27/227 (11%)

Query: 14  FHYRRRPFLLKR---------NMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFS 63
              + R   ++R         + I    R++ V   F+E+ + SL   S         F 
Sbjct: 118 TRLKYRYLDIRREVKANLISKSEILRIFRDHLVHENFMEVFTPSLSISSQEG---ANTFD 174

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           T ++ +        L  SP+   + L+  G E+ F  A+ +R  +     Q EF  ++  
Sbjct: 175 TRVLREKKEAI-FSLSQSPQLYKQLLMIGGLERYFQIANCFRLEDLRADRQYEFFQIDIE 233

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A  + E+L       +              Q       +    I+  EA  RY +    
Sbjct: 234 MAFSNQEKLFSIIETALS---------KIWSQFKKSELPTPFPRISYDEALKRYGSDKPD 284

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
              +             ++  G   AH     DI     I ++E   
Sbjct: 285 LRYEFLIDDLSSHFKELSKANGHDEAHGLFIPDI----EIFQVEEKW 327


>gi|217976405|ref|YP_002360552.1| aspartyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254781742|sp|B8EN55|SYD_METSB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|217501781|gb|ACK49190.1| aspartyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 623

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 30/191 (15%)

Query: 4   IPSQPWWNR----DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + ++    D   R R            ++ R  +  SLR       F E  +  L
Sbjct: 110 LPLPVFGDQNYPEDMRLRYRFLDLRREKLHNNIMLRGRVIDSLRARMKGQGFFEFQTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     +        Y L  +P+   + L+ AG ++ F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRLH---PGKFYALPQAPQQFKQLLMTAGFDRYFQIAPCFRDE 223

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
           +       EF  L+   +  + E +      ++R   E   +              E   
Sbjct: 224 DLRADRSLEFYQLDIEMSFVTQEDIFATVEPVLRGVFEEFGE--------GFAVTPEFPR 275

Query: 168 ITVAEAFARYA 178
           I  AE   +Y 
Sbjct: 276 IPYAETMLKYG 286



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 57/178 (32%), Gaps = 21/178 (11%)

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILD 239
           +D      N D+      +          +  +   + F  +     E  +GI+      
Sbjct: 437 VDFPMYEWNEDEKRIDFSHN-------PFSMPNCNLEQFLALETGVREEIVGIDRGERNR 489

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                                ++++     EL +       P   R  F          Y
Sbjct: 490 DLNES---NELRKRILEITAFQYDVVCNGFELSSGAIRNHRPDIMRKAF------ALAGY 540

Query: 300 NETYPIDEDF---LACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           +ET  +++ F           P   GIA G DR+VML+ G  N+ E++  P +Q  ++
Sbjct: 541 DET-VLEQKFGGMYRAFHYGAPPHGGIAPGVDRIVMLLAGEENLREIVAFPMNQRGED 597


>gi|209548707|ref|YP_002280624.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|238064671|sp|B5ZX21|SYD_RHILW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|209534463|gb|ACI54398.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 596

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 63/196 (32%), Gaps = 29/196 (14%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    +KR  + S++R       F E  +  L 
Sbjct: 111 PLPVFGEPDYPEDVRLKYRFLDLRRETLHKNIVKRTQVISAMRREMGNVGFTEYTTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRIH---PGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E +                  +F           E   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVTQEDVWDTMG--------PLMTSVFEEFAEGKPVTKEWPR 276

Query: 168 ITVAEAFARYANIDLG 183
           I   EA  +Y +    
Sbjct: 277 IPYDEAIRKYGSDKPD 292



 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 48/163 (29%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +          I      E  E +  ++        P            
Sbjct: 413 EARTKAGEELNLVDRDRFELCWIVDFPFFEWSEEDKKVDFAHNPFSMPQGGLDALQNQDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 +++      E+ +       P       E  +   +K+      +++ F     
Sbjct: 473 LTIKAFQYDAVCNGFEIASGSIRNQSP-------ETMVAAFEKVGLSQQDVEDRFGGLYR 525

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G A G DR+VML+ GA N+ E+   P +Q  Q+
Sbjct: 526 AFQYGAPPHGGAAFGIDRIVMLLVGAKNLREISVFPMNQQAQD 568


>gi|302655131|ref|XP_003019360.1| hypothetical protein TRV_06641 [Trichophyton verrucosum HKI 0517]
 gi|291183076|gb|EFE38715.1| hypothetical protein TRV_06641 [Trichophyton verrucosum HKI 0517]
          Length = 539

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 91/290 (31%), Gaps = 38/290 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHIRKPLYLQ 79
            L  R  +  + R+ F + Q +E+   ++  +     + +  F       D+  +  YL 
Sbjct: 276 VLKVRAAVVRAFRKTFEQKQMLEVTPPAMVQTQVEGGSTLFEF-------DYYGEKAYLT 328

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S +   +  L A    +FC   ++R  +     H  E+T +E      ++  L+     
Sbjct: 329 QSSQLYLETCL-ASLGDVFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEE 387

Query: 139 IIRCAAEVANQKIFSFQNVNC--NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           II    +++         V      F+ P    +   ++                    +
Sbjct: 388 IICSVIDISLADPQIAAFVKQLNPNFTPPARPFMRMRYSE------------------AI 429

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP-AD 255
            +L             ++ D  +     K+     IN   +L  +PA   A        D
Sbjct: 430 EWLNEHGINNEEDKPHSFGDDIAEAAERKM--TDIINKPILLTHFPAEIKAFYMKKDAQD 487

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           PR T+  ++    +         +D  +     E     KK+  + T   
Sbjct: 488 PRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMGAYKKEGMDPTPYY 532


>gi|241845294|ref|XP_002415522.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215509734|gb|EEC19187.1| aspartyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 632

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 31/201 (15%)

Query: 15  HYRRRPF----------LLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAF 62
             R R            L  R+ +Q  +R + V++  F+EI++ +L + +PG        
Sbjct: 169 RMRYRYLDLRSSEMQRNLRFRSDLQMRMRNFLVQSCGFVEIETPTLFKRTPGGAQ----- 223

Query: 63  STELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
             E ++        Y L  SP+   + L+  G ++ F  A  +R+       QPEFT ++
Sbjct: 224 --EYVVPTRFPGQFYSLVQSPQQFKQLLMVGGIDRYFQMARCYRDEGARPDRQPEFTQVD 281

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
              +  +   +M+    ++            S+             +T  +A  +Y   D
Sbjct: 282 IEMSFATANDIMEVTEELLV----------KSWPEDMTPITEPFPIMTYRDAIRQY-GTD 330

Query: 182 LGTTLDNPDQPDRHLLYLQAQ 202
                      D   +    +
Sbjct: 331 KPDLRFGMQLVDVTQVMKDCE 351



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 10/155 (6%)

Query: 194 RHLLYLQAQQAGIR-VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           R        +AGI                 + K+E + G+         P  +       
Sbjct: 456 RLEALKILSEAGIHLFEPGTFKFLWVVDFPLFKLEEDGGLKANHHPFTAPHLDDLHLIHT 515

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
                  + ++L     E+      + +   QR    + ++ +              L  
Sbjct: 516 DPLKARGQHYDLVLNGWEVAGGSVRIHNAHLQRQVLREILKARDDTQL------SHLLEA 569

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G  +LV ++  + +I +VI  P
Sbjct: 570 LESGAPPHGGIALG--KLVCILCNSPSIRDVIAFP 602


>gi|309354922|emb|CAP39658.2| CBR-DARS-2 protein [Caenorhabditis briggsae AF16]
          Length = 629

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 74/209 (35%), Gaps = 40/209 (19%)

Query: 14  FHYRRRPF----------LLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRA 61
              + R            L  R+    +LR++ VE   F+++++ +L + +PG  T    
Sbjct: 137 TRLKYRYIDLRSDKLQRSLRIRSEFVHNLRKFLVEKSGFVDVETPTLFRRTPGGATE--- 193

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC---------------FAHAWRN 106
           F       +H      L  SP+   + L+    ++ F                 A  +R+
Sbjct: 194 FVVPAPSPNH-GMAYSLPQSPQQFKQLLMVGAIDRYFQVFLNGETEKKTLIFQIARCYRD 252

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                  QPEFT ++   +  + E +M+   +++  A   +          +  P S   
Sbjct: 253 EGSKGDRQPEFTQVDVEMSFTTQEGVMQLIEDMVISAWPESL--------NHIKPKSPFP 304

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRH 195
            I+ + A A+Y  ID        +  D  
Sbjct: 305 RISYSGAMAKY-GIDKPDMRIPWEIEDVK 332



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 21/128 (16%)

Query: 239 DRYP--------APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
             +P              ++         + ++L    +E+      + +   QRH    
Sbjct: 468 THHPFTAPVEKDKEMLFESDNQKLLQITGQHYDLVMNGVEMGGGSVRIENSEIQRHVL-- 525

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN----INEVIWT 345
                K +   T  + E  L  L    P   G A+G DR V ++    N    + +VI  
Sbjct: 526 -----KVLGEPTEEM-EHLLNALSYGAPPHGGFALGLDRFVAMLASDGNPLTPVRDVIAF 579

Query: 346 PFSQSNQE 353
           P +++ ++
Sbjct: 580 PKTKNGKD 587


>gi|156841338|ref|XP_001644043.1| hypothetical protein Kpol_1026p33 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114676|gb|EDO16185.1| hypothetical protein Kpol_1026p33 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 445

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 16/166 (9%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R               ++ +    RE+ +  +F E+ +  L  +  +E     F
Sbjct: 229 DTRLDARVIDLRTITNQAIFRIQSGVCQLFREFLINKKFTEVHTPKLLGAA-SEGGANVF 287

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                         YL  SP+F  ++L+ A  E++F  A  +R        H  EFT L+
Sbjct: 288 EVSYFK----DAKAYLAQSPQFHKQQLMVADFERVFEIAPVFRAENSNTHRHMTEFTGLD 343

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                E     + D ++ +         K F+ +          E 
Sbjct: 344 LEMTFEENYHEVMDTLSELFVFIFGELNKRFAKEIETVRKQYPVEE 389


>gi|320590287|gb|EFX02730.1| asparaginyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 596

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 85/280 (30%), Gaps = 27/280 (9%)

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +  +  YL  S +   +  L +    ++C   ++R  +     H  E+T +E       +
Sbjct: 334 YYSEDAYLTQSSQLYLETCLPS-LGDVYCIEKSFRAEKSLTRRHLAEYTHIEAELDGIVF 392

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E L+    ++I    +                   P ++  A  F R    D    L+  
Sbjct: 393 EDLLTHVEDMICAVVDAVLADPAGR---ELVQLLNPGFVKPARPFRRMRYADAIDWLNAQ 449

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SAL 248
           D P  +                  + D  +     K+     +N   +L  +P    +  
Sbjct: 450 DPPVPN-----------EFGQPHVFGDDIAEAAERKMVDT--LNVPVLLTHFPVEVKAFY 496

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
               PAD R T+  ++    +       E++    +   +E+ +   K       P    
Sbjct: 497 MKKDPADLRVTESVDVLMPTV------GEIVGGSMRMEGYEELLAAFKNKGLNPEPY-YW 549

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +L           G  +G +R +  +   + +      P 
Sbjct: 550 YLDQRKYGTSPHGGYGLGLERFLAWIANQHTVRTCCLYPR 589


>gi|327194285|gb|EGE61148.1| aspartyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 596

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 63/196 (32%), Gaps = 29/196 (14%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    +KR  + S++R       F E  +  L 
Sbjct: 111 PLPVFGEPDYPEDVRLKYRFLDLRRETLHRNIVKRTQVISAMRREMGAVGFTEYTTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRIH---PGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E +                  +F           E   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVTQEDVWNTMG--------PLMTSVFEEFADGKPVTKEWPR 276

Query: 168 ITVAEAFARYANIDLG 183
           I   EA  +Y +    
Sbjct: 277 IPYDEAIRKYGSDKPD 292



 Score = 78.5 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 48/163 (29%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +          I      E  +    ++        P    A       
Sbjct: 413 EARTKAGEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLAALQNQDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 +++      E+ +       P       E  +   +K+      +++ F     
Sbjct: 473 LTIKAFQYDAVCNGFEIASGSIRNQSP-------ETMVAAFEKVGLSQQDVEDRFGGLYR 525

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G A G DR+VML+ GA N+ E+   P +Q  Q+
Sbjct: 526 AFQYGAPPHGGAAFGIDRIVMLLVGAKNLREISLFPMNQQAQD 568


>gi|15888491|ref|NP_354172.1| aspartyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|27923862|sp|Q8UG87|SYD_AGRT5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|15156191|gb|AAK86957.1| aspartyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 595

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 27/195 (13%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    +KR  I SS+R+   +  F E  +  L 
Sbjct: 111 PLPVFGEPEYPEDVRLKYRFLDLRRETLHRNIVKRTQIISSMRKGMGDLGFAEYTTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             SP      R F     I +   +   L  +P+   + L+ AG ++ F  A  +R+ + 
Sbjct: 171 ASSPEG---ARDFLVPSRIHE--GQFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDP 225

Query: 110 GCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                P EF  L+   +  + E +      ++          +F           +   I
Sbjct: 226 RADRLPGEFYQLDVEMSFVTQEDVWTTMEPMM--------TAVFEQFAEGKPVTKQWPRI 277

Query: 169 TVAEAFARYANIDLG 183
              E+  +Y +    
Sbjct: 278 PYDESIRKYGSDKPD 292



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 48/163 (29%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                 A +  +          I      E  E    I+        P            
Sbjct: 413 EARTRAADELNLIDRDRFEMCWIVDFPFFEYNEEEKKIDFAHNPFSMPQGGMEALEGQDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 +++      E+ +       P       E  ++  +K+      ++E F     
Sbjct: 473 LSIKAFQYDAVCNGFEIASGSIRNQSP-------ELMVKAFEKVGLSQSDVEERFGGLYR 525

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G A G DR+VML+ GA N+ E+   P +Q  Q+
Sbjct: 526 AFQYGAPPHGGCAFGIDRVVMLLVGAKNLREITLFPMNQQAQD 568


>gi|320089973|gb|ADW08470.1| asparaginyl-tRNA synthetase [Klebsiella pneumoniae]
          Length = 202

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 58/210 (27%), Gaps = 18/210 (8%)

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
               +   + +   +  +   F+E       +   R+   D           D       
Sbjct: 3   EAMLKYVFKAVLEERADDMQFFAERVDKDAIDRLQRFITADFAQV-------DYTDAVTI 55

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
            +  G +  +   W    S      +          +   YP    A       D +   
Sbjct: 56  LENCGKQFENPVYWGVDLSSEHERYLAEEHFKAPVVVK-NYPKDIKAFYMRLNEDGKTVA 114

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQ 318
                     L     E++   ++  R +       ++       D  +   L       
Sbjct: 115 AM------DVLAPGIGEIIGGSQREERLDVLDARMAEMGL--NKEDYWWYRDLRRYGTVP 166

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
            SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 167 HSGFGLGFERLIAYVTGVQNVRDVIPFPRT 196


>gi|222085492|ref|YP_002544022.1| aspartyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|254781708|sp|B9JCV9|SYD_AGRRK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221722940|gb|ACM26096.1| aspartyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 596

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 64/196 (32%), Gaps = 29/196 (14%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    +KR  + SS+R +  E  F E  +  L 
Sbjct: 111 PLPIFGEPDYPEDVRLKYRFLDLRRDTLHKNIVKRTQVISSMRRHMGEVGFTEYTTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRIH---PGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E +                  IF           E   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVTQEDVWNTMA--------PLMTSIFEEFAEGKPVTKEWPR 276

Query: 168 ITVAEAFARYANIDLG 183
           I    A  +Y +    
Sbjct: 277 IPYDVAIRKYGSDKPD 292



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 46/163 (28%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                   +  +          I      E  E    ++        P            
Sbjct: 413 EARTRAGDELNLIDRDRFELCWIVDFPFFEWSEEEKKVDFAHNPFSMPQGGLEALQNQDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 +++      E+ +       P       E  +   +K+      ++E F     
Sbjct: 473 LTIKAYQYDAVCNGFEIASGSIRNQSP-------ETMVAAFEKVGLSQADVEERFGGLYR 525

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G A G DR+VML+ GA N+ E+   P +Q  Q+
Sbjct: 526 AFQYGAPPHGGAAFGIDRIVMLLVGAKNLREISLFPMNQQAQD 568


>gi|209528216|ref|ZP_03276683.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209491338|gb|EDZ91726.1| aspartyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 91

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E Y      L       P   GIA G DRLVML+ G ++I +VI  P
Sbjct: 8   EEAYNKFRFLLEAFEYGTPPHGGIAYGLDRLVMLLAGEDSIRDVIAFP 55


>gi|182678379|ref|YP_001832525.1| aspartyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|238691242|sp|B2IKA4|SYD_BEII9 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|182634262|gb|ACB95036.1| aspartyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 597

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 62/188 (32%), Gaps = 16/188 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R  +  SLR    E  F E  +  L   SP      R F     I    
Sbjct: 134 RREKLHKNIMLRGQVIDSLRRRMKEQGFFEFQTPILTASSPEG---ARDFLVPSRIH--A 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L+   +  + E 
Sbjct: 189 GKFYALPQAPQQYKQLLMMAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVEMSFITQED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +IR A E         Q            I  AEA  +Y   D     +    
Sbjct: 249 VFAAMEPVIRGAFEEFGNGQPVTQT--------FPRIPYAEAMLKY-GSDKPDLRNPLVI 299

Query: 192 PDRHLLYL 199
            D   L+ 
Sbjct: 300 ADVTDLFA 307



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 13/157 (8%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            + G+          I    + E  E +  ++        P  +  L  +   DP   K 
Sbjct: 422 HELGLSKTGVFELCWIVDFPMYEWNEDDKTVDFSHNPFSMP--QGGLEALQTQDPLTIKA 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKK-KIYNETYPIDEDF---LACL-TEM 316
           F+        CN   E+     + HR E  ++  +   Y E   + E F           
Sbjct: 480 FQY----DIACNGY-EIASGGIRNHRPEAMVKAFEIAGYGEETVV-ERFGGMYRAFQYGA 533

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G+A G DR++ML+ G  N+ E+   P +Q  ++
Sbjct: 534 PPHGGMAAGVDRIIMLLAGVQNLREISLFPMNQKAED 570


>gi|190891179|ref|YP_001977721.1| aspartyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190696458|gb|ACE90543.1| aspartyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 602

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 63/196 (32%), Gaps = 29/196 (14%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    +KR  + S++R       F E  +  L 
Sbjct: 117 PLPVFGEPDYPEDVRLKYRFLDLRRETLHRNIVKRTQVISAMRREMGAVGFTEYTTPILT 176

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 177 ASSPEG---ARDFLVPSRIH---PGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 230

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E +                  +F           E   
Sbjct: 231 PRADRLPGEFYQLDLEMSFVTQEDVWNTMG--------PLMTSVFEEFADGKPVTKEWPR 282

Query: 168 ITVAEAFARYANIDLG 183
           I   EA  +Y +    
Sbjct: 283 IPYDEAIRKYGSDKPD 298



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 47/163 (28%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +          I      E  +    ++        P            
Sbjct: 419 EARTKAGEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLDALTNQDP 478

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 +++      E+ +       P       E  +   +K+      +++ F     
Sbjct: 479 LTIKAFQYDAVCNGFEIASGSIRNQSP-------ETMVAAFEKVGLSQQDVEDRFGGLYR 531

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G A G DR+VML+ GA N+ E+   P +Q  Q+
Sbjct: 532 AFQYGAPPHGGAAFGIDRIVMLLVGAKNLREISLFPMNQQAQD 574


>gi|152966984|ref|YP_001362768.1| aspartyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189082102|sp|A6WCG5|SYD_KINRD RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|151361501|gb|ABS04504.1| aspartyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 598

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 15/115 (13%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFE----KEM 292
             + AP+  + + +  DP       +++     E+      +     Q   F      E 
Sbjct: 449 HAFTAPKPEVVDTFDTDPGSALSNAYDIVCNGNEIGGGSIRIHRRDVQERVFAVMGISEA 508

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             ++K            L   +   P   GIA G+DR+V L+ G ++I EVI  P
Sbjct: 509 DAREKFG--------FLLDAFSFGAPPHGGIAFGWDRVVALLAGVDSIREVIAFP 555



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 16/149 (10%)

Query: 36  FVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
             E+ F EI++ +L   +P      R F     +         L  SP+   + L+ AG 
Sbjct: 154 LEEHAFTEIETPTLTRSTPEG---ARDFLVPARL--APGSWYALPQSPQLFKQLLMVAGM 208

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
           E+ +  A  +R+ +     QPEFT L+   +    + ++     I+    ++        
Sbjct: 209 ERYYQLARCYRDEDFRADRQPEFTQLDIEMSFVEQDDVIALGEQIVAALWKLIGHD---- 264

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLG 183
                        +T  EA  RY +    
Sbjct: 265 ------VPLPLPRMTYEEAMRRYGSDKPD 287


>gi|86136523|ref|ZP_01055102.1| aspartyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85827397|gb|EAQ47593.1| aspartyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 617

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 65/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  +L R+ +  S+R+   +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKMQQNMLLRSNMVQSIRKRMWDKGFNEYQTPIITASSPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +  + +
Sbjct: 188 PGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVTQQ 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      +++   E                + +      ++       I +    ++  
Sbjct: 248 DVFDTIQPVMQGVFEEFGGGRKVDSEWPQISYRDAALWYGSDKPDLRNPIKMQVVSEHFA 307

Query: 191 QPDRHLLYLQAQQAGIRV 208
                +     +Q G  V
Sbjct: 308 GSGFAIFAKLLEQEGTEV 325



 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 12/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       ++ +    + E  E    I+        P          P +      
Sbjct: 444 EELGLTDKDRFAFAWVVDFPIYEADEETGKIDFEHNPFSMPQGGMDALEGNPLE------ 497

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
             L       CN   EL+    + HR E   +  +        +++ F   +       P
Sbjct: 498 -VLGYQYDLACNGY-ELVSGAIRNHRPEIMFKAFEIAGYGKDEVEKRFGGMVNAFQYGAP 555

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 556 PHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAED 591


>gi|213648692|ref|ZP_03378745.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 184

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 46/158 (29%), Gaps = 11/158 (6%)

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           D        ++ G    +   W    S      +          +   YP    A     
Sbjct: 30  DYTDAVAILERCGKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVK-NYPKEIKAFYMRL 88

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             D +             L     E++   ++  R +       ++       D  +   
Sbjct: 89  NEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDARMAEMGL--NKEDYWWYRD 140

Query: 313 L--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 141 LRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 178


>gi|154278289|ref|XP_001539960.1| hypothetical protein HCAG_05427 [Ajellomyces capsulatus NAm1]
 gi|150413545|gb|EDN08928.1| hypothetical protein HCAG_05427 [Ajellomyces capsulatus NAm1]
          Length = 523

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/374 (12%), Positives = 95/374 (25%), Gaps = 75/374 (20%)

Query: 41  FIEIDSMSLQYS---PGNETHIRAFSTELII-------QDHIRKPLYLQTSPEFSCKKLL 90
           F+++    +  S      E     F+            ++  R P YL  S +   +   
Sbjct: 151 FVQVQPPLITSSDCEGAGEV----FTVVPGDKVGGAEVEEFFRSPKYLTVSSQLHLEAY- 205

Query: 91  AAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNI-IRCAAEVAN 148
           AA    ++  +  +R  +     H  EF MLE           + D +   IR   +   
Sbjct: 206 AAELGNVWALSPTFRAEKSDTPRHLSEFYMLEVEMNFVQSVDSLTDIVESLIRDLTKRLY 265

Query: 149 QKIFSFQNVNCNPFSEP--EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
           +   + +        E   E +        +  ++              LL    Q    
Sbjct: 266 ETPVAEEIFTAKRTGESGAEKVDKGLRLRWFGIMEGEKWPRITYTSAIELLQKAVQSKAT 325

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN---------------- 250
                  W +       + I   +G      +  YP                        
Sbjct: 326 IFNFPPVWEEGLQLEHEKFIVDEIGKGRPVFVTHYPKRVKPFYMAPSLVTDESSSSPAAE 385

Query: 251 -IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN--------- 300
             +    +  +    +   +       E++    +  R    ++  ++            
Sbjct: 386 VPHHDPLQTRETVACFDLLMPEI---SEVVGGSIREQRLPNLIKNMREHGLLKKKLEAGS 442

Query: 301 -----------------ETYPI---DEDF-----LACLT--EMPQSSGIAMGFDRLVMLV 333
                              YP    DE        A L         G  +GFDR +  +
Sbjct: 443 DADNASPSTYSISESSSPVYPYLQPDEHLGSIQWYADLRRWGSAPHGGFGLGFDRYLGYL 502

Query: 334 TGANNINEVIWTPF 347
            G +++ +V+  P 
Sbjct: 503 AGVSSLRDVVPFPR 516


>gi|167747219|ref|ZP_02419346.1| hypothetical protein ANACAC_01933 [Anaerostipes caccae DSM 14662]
 gi|167653197|gb|EDR97326.1| hypothetical protein ANACAC_01933 [Anaerostipes caccae DSM 14662]
          Length = 589

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 13/164 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A +  +   +   +  I    + E  E    +         P       N    
Sbjct: 411 QIRDELAARLDLCEKNAYRFCYINDFPMYETDEETGQVTFTHNPFSMPQGGLEALNEKDP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    +EL +      D       FE         Y+E   + E F   L 
Sbjct: 471 LDILAYQYDIVCNGVELSSGAVRNHDLDVMVKAFEI------AGYDEE-TLKEKFG-ALY 522

Query: 315 -----EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  P  +G+A G DR++ML+    NI EVI  P S + Q+
Sbjct: 523 HAFQFGAPPHAGMAPGIDRMIMLLRNEENIREVIAFPMSGTAQD 566



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 68/192 (35%), Gaps = 15/192 (7%)

Query: 13  DFHYRR-RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQD 70
           D   R+ +  +  R+ + S LR    +  F+EI +  L   SP      R +        
Sbjct: 138 DLRNRKVKDNIKFRSEVISFLRRKMDDLGFMEIQTPILCASSPEG---ARDYIVPSRK-- 192

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESY 129
           +  K   L  +P+   + L+ +G +K +  A  +R+ +      P EF  L++  +  + 
Sbjct: 193 YKGKFYALPQAPQQYKQLLMVSGIDKYYQVAPCFRDEDARADRSPGEFYQLDFEMSFATQ 252

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E + K    ++    +    +       +    +    I+  +A   +   D     +  
Sbjct: 253 EDVFKIGEEVLAETFKKFAPE------GSVVTDTPFPVISYQQAMLEF-GTDKPDLRNPL 305

Query: 190 DQPDRHLLYLQA 201
              D    + + 
Sbjct: 306 RIVDVTDFFQRC 317


>gi|315426530|dbj|BAJ48161.1| aspartyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 108

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 10/111 (9%)

Query: 241 YPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
           +P   +         DPR ++ F+L    +EL +    + D            + ++K  
Sbjct: 1   FPTESKPFYIQETEKDPRISESFDLMYQWLELASGGTRVSDHDVLER------KLREKGL 54

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           N      ED L      MP  +G  +GF+R +M++T   NI E +  P  +
Sbjct: 55  NPAMF--EDHLKVFSYGMPVHAGWGLGFERFLMVLTRRTNIRETVLFPRDR 103


>gi|121602128|ref|YP_989155.1| aspartyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166225321|sp|A1UT52|SYD_BARBK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|120614305|gb|ABM44906.1| aspartyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 596

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 70/195 (35%), Gaps = 27/195 (13%)

Query: 3   QIPS--QPWWNRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   + R            +++R  I SS+R +  ++ F E  +  L 
Sbjct: 111 PLPVFGEPDYPEDIRLKYRFLDLRRVTMHKNIMRRTEIISSIRRHMQDSGFTEFTTPLLT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             SP      R F     I     K   L  +P+   + L+ +G ++ F  A  +R+ + 
Sbjct: 171 ASSPEG---ARDFLVPSRIH--QGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDP 225

Query: 110 GCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                P EF  L+   +    E ++     IIR   E  +      Q+           I
Sbjct: 226 RADRLPGEFYQLDIEMSFVEQEDVLATMEPIIRSVFEEFSDGKLVTQS--------FPRI 277

Query: 169 TVAEAFARYANIDLG 183
           +  EA  +Y +    
Sbjct: 278 SYDEAMRKYGSDKPD 292



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 46/153 (30%), Gaps = 17/153 (11%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +  +   +++ I      E  E    I+        P       +          +
Sbjct: 420 EELDLIDSKCFSFAWIVDFPFFEWNEDEKKIDFAHNPFSMPQGGMNAVDSQDPLTIKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-T 314
           ++L     E+ +       P      F       + ++E+                    
Sbjct: 480 YDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSREIVEERFGG----------LYRAFHY 529

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             P   G+A G DR+VML+ G  N+ E+   P 
Sbjct: 530 GAPPHGGMAAGVDRIVMLLQGVKNLREISLFPM 562


>gi|312379942|gb|EFR26078.1| hypothetical protein AND_08074 [Anopheles darlingi]
          Length = 366

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 59/138 (42%), Gaps = 8/138 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDH 71
            + + +  L  R+ +  ++RE    +  F+E+++ +L + +PG       F        H
Sbjct: 223 RNPQMQRNLRLRSQVIMTMRECMINDFGFLEVETPTLFRRTPGGAQE---FVVPSRKPGH 279

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
                 L  SP+   + L+    ++ F  A  +R+       QPEFT L+   +    E+
Sbjct: 280 F---YSLVQSPQQFKQMLMVGAIDRYFQIARCYRDESTRPDRQPEFTQLDIELSFTDREK 336

Query: 132 LMKDCMNIIRCAAEVANQ 149
           ++     ++R +   A+Q
Sbjct: 337 VIALVEAVLRKSWPFADQ 354


>gi|224069900|ref|XP_002303078.1| predicted protein [Populus trichocarpa]
 gi|222844804|gb|EEE82351.1| predicted protein [Populus trichocarpa]
          Length = 626

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 81/287 (28%), Gaps = 25/287 (8%)

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWY 123
                D   +  YL  S     +    A    +F F   +R + ++      E  M+E  
Sbjct: 358 PSFYGDFFSQQTYLTVSGLLHLESYACA-MGNVFSFGPRFRADRKESAKRISEMWMVEVQ 416

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            A    E  M       +   +   +              +                   
Sbjct: 417 MAFSQLEDAMNCADEYFKFLCKWILKNCSEDMKFVSKRIDKSS--------------SYR 462

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                    ++       ++  ++   +  W    +   +  +  ++      I+  YP 
Sbjct: 463 LESMISSSIEKISYMEALKKVAVKFELNQEWGIALTPEHLSYLAEDVYRKPV-IIYNYPK 521

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                      D +    F++             ++   +   R +   +  +++     
Sbjct: 522 ELKPFYVRLNDDGKTAAAFDMVVPK------AGTIITGSQSEERIDILNKTIEELRLPRE 575

Query: 304 PIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              E ++        + SG ++GFD +V+  TG  ++ +VI  P S+
Sbjct: 576 QY-EWYMDLRRHGTVEHSGFSLGFDLMVLFTTGLPDVRDVIPFPRSR 621


>gi|163742945|ref|ZP_02150329.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161383909|gb|EDQ08294.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 592

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 63/197 (31%), Gaps = 7/197 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  +L R+ +  S+R    +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKMQKNMLLRSNMIQSIRRRMWDKGFNEYQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +  + + 
Sbjct: 189 GKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVTQQD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   E   +            + +       +       I +    ++   
Sbjct: 249 VFDTIQPVMQGVFEEFGKGRKVDSEWPQISYKDAAKWYGTDKPDLRNPIKMQDCSEHFRG 308

Query: 192 PDRHLLYLQAQQAGIRV 208
               +     +  G  +
Sbjct: 309 SGFAIFANLLENEGTEI 325



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 16/158 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    + EK E    I+        P          P   +   +
Sbjct: 419 EELGLTDKDRFAFCWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALLSDPLAVKG-YQ 477

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTE 315
           ++L     EL +       P      FE      +E++++       +            
Sbjct: 478 YDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQ---------YG 528

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 529 APPHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAED 566


>gi|154275552|ref|XP_001538627.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150415067|gb|EDN10429.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 680

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 12/134 (8%)

Query: 227 EPNLGINCCTILDRYPAPESALANI-----YPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P       +                ++L    +EL      +   
Sbjct: 519 EPGQGGAAGIASTHHPFTAPLRKSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSA 578

Query: 282 IEQRHRFEKEMQE-KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q       ++    ++ + ++ +D   L      P  +GIA+GFDRLV ++ G +++ 
Sbjct: 579 AVQEFILRDILKMPADRLADFSHLLDA--LRA--GCPPHAGIALGFDRLVAVMLGKDSLR 634

Query: 341 EVIWTPFSQSNQEE 354
           +VI  P  +S + E
Sbjct: 635 DVIAFP--KSGKGE 646



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 17/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  LL R   ++ LRE   E Q  F+EI++  L + +P      R F      +      
Sbjct: 203 RHALLFRARARNVLREALEECQLPFVEIETPLLFKSTPEGA---REFLVPTRRR---GMA 256

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 257 YALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLDLEMSFAT------- 309

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E A ++++S       P      ++  +A A+Y +      +    +   H
Sbjct: 310 -GEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRIEH 368

Query: 196 LL 197
           ++
Sbjct: 369 MI 370


>gi|116180536|ref|XP_001220117.1| hypothetical protein CHGG_00896 [Chaetomium globosum CBS 148.51]
 gi|88185193|gb|EAQ92661.1| hypothetical protein CHGG_00896 [Chaetomium globosum CBS 148.51]
          Length = 695

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 7/96 (7%)

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
             ++L    +EL      +     Q +   + ++                L  L    P 
Sbjct: 580 DHYDLVVNGVELGGGSRRIHVAKMQEYIMREILKMTDSGV--AQF--SHLLEALRAGCPP 635

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
            +G A+GFDRLV ++T  +++ +VI  P  +S + E
Sbjct: 636 HAGFALGFDRLVAVLTYTDSVRDVIAFP--KSMKGE 669



 Score = 44.6 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
           R  LL R  I   LR+   +  F E+++  L  S
Sbjct: 241 RTRLLVRPQIAFQLRKSLNDLAFTEVETPVLAPS 274


>gi|238491530|ref|XP_002377002.1| aspartyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220697415|gb|EED53756.1| aspartyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 560

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 52/163 (31%), Gaps = 14/163 (8%)

Query: 194 RHLLYLQAQQAGIRVAHD----DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
           R  L+  A  +G + A          D          EP  G         +P      A
Sbjct: 371 RRALHSAAVSSGFKPAPTGFDFRWIVDFPLFSPSSDSEPGQGGAAGISSTHHPFTAPKTA 430

Query: 250 NIYP---ADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                   DP       ++L    +EL      + D   Q       +Q       E   
Sbjct: 431 ADVDLLLTDPTKVVADHYDLVVNGVELGGGSRRIHDATVQEFILRDILQMPA----ERLA 486

Query: 305 IDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                L  L    P  +G+A+GFDRLV ++ G  ++ +VI  P
Sbjct: 487 DFSHLLEALRAGCPPHAGLALGFDRLVAVMLGKESVRDVIAFP 529



 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 17/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R  + +  +E   + +  F+EI++  L + +P      R F      +      
Sbjct: 91  RDALRFRAQVHNVCKEELEQCRPPFVEIETPLLFKSTPEG---AREFLVPTRKR---GLA 144

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + F FA  +R+ +     QPEFT L+   +  + E +M+ 
Sbjct: 145 YALPQSPQQYKQILMASGIPRYFQFARCFRDEDLRADRQPEFTQLDMEMSFATGEDVMRT 204

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
              IIR        +++S    +  P    + ++  +A +RY +    T          H
Sbjct: 205 VEGIIR--------RLWSTLMKDPAPSGPFQRMSYQDAMSRYGSDKPDTRFGMEISRIEH 256

Query: 196 LL 197
           LL
Sbjct: 257 LL 258


>gi|163744719|ref|ZP_02152079.1| aspartyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161381537|gb|EDQ05946.1| aspartyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 591

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 75/222 (33%), Gaps = 23/222 (10%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P Q + +++        YR    RR  + K    R+ + +S+R+   +  F E  +  +
Sbjct: 110 LPLQVFGDQEYPEETRLRYRYLDLRREKMQKNMTLRSDVVTSIRKRMWDQNFREFQTPII 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     +        Y L  +P+   + L+ +G +K F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRLH---PGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P +F  L+   +  + + +      +I    E         +      + +  
Sbjct: 224 DPRADRSPTDFYQLDMEMSFVTQQDVFDTIQPVIAGIFEEFGGGKKVDETWEQISYKDAA 283

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
               ++       I +    ++       +     +Q G  +
Sbjct: 284 LWYGSDKPDLRNPIKMQVVSEHFRDSGFAIFAKLLEQDGTEI 325



 Score = 79.3 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 52/158 (32%), Gaps = 16/158 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +   +   ++ I    + EK E    I+        P          P       +
Sbjct: 419 EELNLTDKNRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALLDDPLKV-LGYQ 477

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTE 315
           ++L     EL +       P      FE       E++++       +            
Sbjct: 478 YDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQ---------YG 528

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 529 APPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAED 566


>gi|218532262|ref|YP_002423078.1| aspartyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|254563332|ref|YP_003070427.1| aspartate tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254781740|sp|B7KN33|SYD_METC4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|218524565|gb|ACK85150.1| aspartyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|254270610|emb|CAX26613.1| aspartate tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 604

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 61/183 (33%), Gaps = 18/183 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    ++KR  I  SLR    E  F E  +  L   SP     ++            
Sbjct: 134 RREKLHANIMKRGAIVDSLRRRMREGGFFEFQTPILTASSPEGARDYLVPSRVHPGKFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   +  + AG ++ F  A  +R+ +      P EF  L+   +  + E
Sbjct: 194 LPQ------APQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVTQE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            + +    ++R   E                  E   IT A+A  +Y  +D     +   
Sbjct: 248 DVFQAVEPVLRGVFEEFAG--------GKRVTKEFPRITYADAMLKY-GVDKPDLRNPLI 298

Query: 191 QPD 193
             D
Sbjct: 299 IAD 301



 Score = 75.8 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 51/162 (31%), Gaps = 17/162 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP-----APESALANIYPADP 256
            +  +       +  +    + E  E +  I+        P        +          
Sbjct: 422 DELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNFDRDEFLALGEADSEKIL 481

Query: 257 R-FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LAC 312
                ++++    IEL +       P      F      +         ++E F   L  
Sbjct: 482 GIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRD-------VLEEKFGGMLNA 534

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   GIA G DR+VML+    NI EV+  P +Q  ++
Sbjct: 535 LRLGAPPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAED 576


>gi|163737749|ref|ZP_02145166.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161389275|gb|EDQ13627.1| aspartyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 592

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 63/197 (31%), Gaps = 7/197 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  +L R+ +  S+R    +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKMQKNMLLRSNMIQSIRRRMWDKGFNEYQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +  + + 
Sbjct: 189 GKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVTQQD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +++   E   +            + +       +       I +    ++   
Sbjct: 249 VFDTIQPVMQGVFEEFGKGRKVDSEWPQVSYKDAAKWYGTDKPDLRNPIKMQDCSEHFRG 308

Query: 192 PDRHLLYLQAQQAGIRV 208
               +     +  G  +
Sbjct: 309 SGFAIFANLLENEGTEI 325



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 16/158 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    + EK E    I+        P          P   +   +
Sbjct: 419 EELGLTDKDRFAFCWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALLSDPLAVKG-YQ 477

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTE 315
           ++L     EL +       P      FE      +E++++       +            
Sbjct: 478 YDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQ---------YG 528

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 529 APPHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAED 566


>gi|83769100|dbj|BAE59237.1| unnamed protein product [Aspergillus oryzae]
          Length = 677

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 52/163 (31%), Gaps = 14/163 (8%)

Query: 194 RHLLYLQAQQAGIRVAHD----DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
           R  L+  A  +G + A          D          EP  G         +P      A
Sbjct: 488 RRALHSAAVSSGFKPAPTGFDFRWIVDFPLFSPSSDSEPGQGGAAGISSTHHPFTAPKTA 547

Query: 250 NIYP---ADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                   DP       ++L    +EL      + D   Q       +Q       E   
Sbjct: 548 ADVDLLLTDPTKVVADHYDLVVNGVELGGGSRRIHDATVQEFILRDILQMPA----ERLA 603

Query: 305 IDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                L  L    P  +G+A+GFDRLV ++ G  ++ +VI  P
Sbjct: 604 DFSHLLEALRAGCPPHAGLALGFDRLVAVMLGKESVRDVIAFP 646



 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 17/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R  + +  +E   + +  F+EI++  L + +P      R F      +      
Sbjct: 208 RDALRFRAQVHNVCKEELEQCRPPFVEIETPLLFKSTPEGA---REFLVPTRKR---GLA 261

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + F FA  +R+ +     QPEFT L+   +  + E +M+ 
Sbjct: 262 YALPQSPQQYKQILMASGIPRYFQFARCFRDEDLRADRQPEFTQLDMEMSFATGEDVMRT 321

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
              IIR        +++S    +  P    + ++  +A +RY +    T          H
Sbjct: 322 VEGIIR--------RLWSTLMKDPAPSGPFQRMSYQDAMSRYGSDKPDTRFGMEISRIEH 373

Query: 196 LL 197
           LL
Sbjct: 374 LL 375


>gi|257784225|ref|YP_003179442.1| aspartyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472732|gb|ACV50851.1| aspartyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 608

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 18/163 (11%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHI 59
           N D   + R            L  R+    +LRE F +  F E+++ +L + +P      
Sbjct: 141 NEDLRLKYRYVDLRRPQMAQNLRLRSDFAFALREAFHKRDFTEVETPALFKSTPEG---A 197

Query: 60  RAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           R F     +Q       Y L  SP+   + L+  G E+ +     +R+ +     QPEFT
Sbjct: 198 RDFLVPSRMQGG---NFYALPQSPQLLKQLLMIGGVERYYQITKCFRDEDLRADRQPEFT 254

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            ++   +    + +M +  +I+  A      +  +        
Sbjct: 255 QVDMEMSFVREDDVMSELEDILGDAFAKMGIEFPTPLRKIQYW 297



 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 13/142 (9%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
               +  + +  L    E              P  E             +  ++      
Sbjct: 442 EGHDFLWVVNFPLFHWDEETQSYASEHQPFTLPREEELDLLDTNPLAMGSYTYDFVMDGF 501

Query: 270 ELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
           E       + +   Q    EK    E + K +            +  LT   P   G A+
Sbjct: 502 EAGGGGMRIHNADLQLKILEKLGFTEERAKAQFG--------FLMEALTFGAPPMGGFAL 553

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           G DR+ ML+TG+++I +V+  P
Sbjct: 554 GLDRVCMLLTGSDSIRDVMAFP 575


>gi|254475910|ref|ZP_05089296.1| aspartyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214030153|gb|EEB70988.1| aspartyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 594

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 59/172 (34%), Gaps = 13/172 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  +L R+ +  S+R    +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKMQNNMLLRSNMIRSIRNRMWDQGFNEYQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +  + + 
Sbjct: 189 GKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDMEMSFVTQQD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +      +I    E   +          +   E   I+  +A   Y +    
Sbjct: 249 VFDTIAPVIAGVFEEFGK------GRKVDAADEWPQISYKDAALWYGSDKPD 294



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 16/158 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       ++ I    + EK E    I+        P          P   +   +
Sbjct: 421 EELGLIDKDRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALLADPLAVKG-YQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTE 315
           ++L     EL +       P      FE      +E++++       +            
Sbjct: 480 YDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQ---------YG 530

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 531 APPHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAED 568


>gi|317470964|ref|ZP_07930343.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316901615|gb|EFV23550.1| aspartyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 589

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 13/164 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +    A +  +   +   +  I    + E  E    +         P       N    
Sbjct: 411 QIRDELAARLDLCEKNAYRFCYINDFPMYETDEETGQVTFTHNPFSMPQGGLKALNEKDP 470

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                 ++++    +EL +      D       FE         Y+E   + E F   L 
Sbjct: 471 LDILAYQYDIVCNGVELSSGAVRNHDLDVMVKAFEV------AGYDEE-TLKEKFG-ALY 522

Query: 315 -----EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  P  +G+A G DR++ML+    NI EVI  P S + Q+
Sbjct: 523 NAFQFGAPPHAGMAPGIDRMIMLLRNEENIREVIAFPMSGTAQD 566



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 68/192 (35%), Gaps = 15/192 (7%)

Query: 13  DFHYRR-RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQD 70
           D   R+ +  +  R+ + S LR    +  F+EI +  L   SP      R +        
Sbjct: 138 DLRNRKVKDNIKFRSEVISFLRRKMDDLGFMEIQTPILCASSPEG---ARDYIVPSRK-- 192

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESY 129
           +  K   L  +P+   + L+ +G +K +  A  +R+ +      P EF  L++  +  + 
Sbjct: 193 YKGKFYALPQAPQQYKQLLMVSGIDKYYQVAPCFRDEDARADRSPGEFYQLDFEMSFATQ 252

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E + K    ++    +    +       +    +    I+  +A   +   D     +  
Sbjct: 253 EDVFKIGEEVLAETFKKFAPE------GSVVTDTPFPVISYQQAMLEF-GTDKPDLRNPL 305

Query: 190 DQPDRHLLYLQA 201
              D    + + 
Sbjct: 306 RIVDVTDFFQRC 317


>gi|213428688|ref|ZP_03361438.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. E02-1180]
          Length = 93

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 4/87 (4%)

Query: 4  IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
          +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1  MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64 TELIIQDH-IRKPLYLQTSPEFSCKKL 89
          T  +   H     LYL TSPE+  K  
Sbjct: 58 TRFVGPGHSQGINLYLMTSPEYHMKAC 84


>gi|240850738|ref|YP_002972138.1| aspartyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267861|gb|ACS51449.1| aspartyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 597

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 61/197 (30%), Gaps = 31/197 (15%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  +    ++R  I +++R     N F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETMHKNIMRRTEIIAAMRRAMQNNGFTEFTTPLL 169

Query: 50  Q-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      +            + +      +P+   + L+ +G ++ F  A  +R+ 
Sbjct: 170 TASSPEGARDFLVPSRVHQGKFYALPQ------APQQYKQLLMMSGFDRYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P EF  L+   +              +    E   + IF              
Sbjct: 224 DPRADRLPGEFYQLDVEMSFV--------EQEDVLATMEPIMRSIFEEFADGKTVTQSFP 275

Query: 167 YITVAEAFARYANIDLG 183
            I+  EA  +Y +    
Sbjct: 276 RISYDEAMQKYGSDKPD 292



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 44/153 (28%), Gaps = 17/153 (11%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +      + + I      E  E    I+        P                  +
Sbjct: 420 EELDLLDRESFSLAWIVDFPFFEWNEDEKKIDFAHNPFSMPQGGENALETQDPLTLKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL-T 314
           ++L     E+ +       P      FE      + ++++                    
Sbjct: 480 YDLVCNGYEIASGGIRNHLPEMMLKVFELVGLSKEVVKDRFGG----------LYRAFHY 529

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             P   G+A G DR++ML+ G  N+ EV   P 
Sbjct: 530 GAPPHGGMAAGIDRIIMLLQGVKNLREVALFPM 562


>gi|254473442|ref|ZP_05086839.1| aspartyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211957558|gb|EEA92761.1| aspartyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 594

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 11/158 (6%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            A++  +          I    + E  E N  ++ C      P                 
Sbjct: 418 AAEELNLIDEDQFALCWIVDFPMYEWDEENKKVDFCHNPFSMPEGGMDGLTNVEPLELNA 477

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TE 315
            ++++     E+ +           +  FE         Y+E+  ++E F          
Sbjct: 478 YQYDVVCNGYEIGSGAIRNHQVEVMKKAFEI------AGYDESL-LEEKFGGMYRAFQYG 530

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G+A G DR+VML+ GA N+ EV   P +Q  Q+
Sbjct: 531 APPHGGMAAGVDRIVMLLVGAKNLREVTLFPMNQQAQD 568



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 66/172 (38%), Gaps = 19/172 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    +KR  I +S+R+   + +F E  +  L   SP      R F     I    
Sbjct: 134 RRDTLHANLMKRTKIINSMRKRMNDAEFNEFQTPILTASSPEG---ARDFLVPSRIH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G +K F  A  +R+ +      P EF  L+   +  + E 
Sbjct: 189 GKFYALPQAPQQFKQLLMMSGFDKYFQIAPCFRDEDPRADRLPGEFYQLDVEMSFVTQED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +++    +IR         +F   +       E   I  AEA  +Y +    
Sbjct: 249 VLQTMEPVIRG--------VFEEFSEGKPVTKEFPRIPYAEAIRKYGSDKPD 292


>gi|317146025|ref|XP_001821239.2| aspartyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 588

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 52/163 (31%), Gaps = 14/163 (8%)

Query: 194 RHLLYLQAQQAGIRVAHD----DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
           R  L+  A  +G + A          D          EP  G         +P      A
Sbjct: 399 RRALHSAAVSSGFKPAPTGFDFRWIVDFPLFSPSSDSEPGQGGAAGISSTHHPFTAPKTA 458

Query: 250 NIYP---ADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                   DP       ++L    +EL      + D   Q       +Q       E   
Sbjct: 459 ADVDLLLTDPTKVVADHYDLVVNGVELGGGSRRIHDATVQEFILRDILQMPA----ERLA 514

Query: 305 IDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                L  L    P  +G+A+GFDRLV ++ G  ++ +VI  P
Sbjct: 515 DFSHLLEALRAGCPPHAGLALGFDRLVAVMLGKESVRDVIAFP 557



 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 17/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  L  R  + +  +E   + +  F+EI++  L + +P      R F      +      
Sbjct: 119 RDALRFRAQVHNVCKEELEQCRPPFVEIETPLLFKSTPEGA---REFLVPTRKR---GLA 172

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + F FA  +R+ +     QPEFT L+   +  + E +M+ 
Sbjct: 173 YALPQSPQQYKQILMASGIPRYFQFARCFRDEDLRADRQPEFTQLDMEMSFATGEDVMRT 232

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
              IIR        +++S    +  P    + ++  +A +RY +    T          H
Sbjct: 233 VEGIIR--------RLWSTLMKDPAPSGPFQRMSYQDAMSRYGSDKPDTRFGMEISRIEH 284

Query: 196 LL 197
           LL
Sbjct: 285 LL 286


>gi|240140823|ref|YP_002965303.1| aspartate tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240010800|gb|ACS42026.1| aspartate tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 604

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 61/183 (33%), Gaps = 18/183 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    ++KR  I  SLR    E  F E  +  L   SP     ++            
Sbjct: 134 RREKLHANIMKRGAIVDSLRRRMREGGFFEFQTPILTASSPEGARDYLVPSRVHPGKFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   +  + AG ++ F  A  +R+ +      P EF  L+   +  + E
Sbjct: 194 LPQ------APQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVTQE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            + +    ++R   E                  E   IT A+A  +Y  +D     +   
Sbjct: 248 DVFQAVEPVLRGVFEEFAG--------GKRVTKEFPRITYADAMLKY-GVDKPDLRNPLI 298

Query: 191 QPD 193
             D
Sbjct: 299 IAD 301



 Score = 76.6 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 52/162 (32%), Gaps = 17/162 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA------NIYPAD 255
            +  +       +  +    + E  E +  I+        P  +          +     
Sbjct: 422 DELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNFDRDEFLALGEADSERIL 481

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LAC 312
                ++++    IEL +       P      F      +         ++E F   L  
Sbjct: 482 GIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRD-------VLEEKFGGMLNA 534

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   GIA G DR+VML+    NI EV+  P +Q  ++
Sbjct: 535 LRLGAPPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAED 576


>gi|294676089|ref|YP_003576704.1| aspartyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294474909|gb|ADE84297.1| aspartyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 593

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 71/222 (31%), Gaps = 23/222 (10%)

Query: 4   IPSQPWWNRD------FHYR----RRP----FLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P Q +   +        YR    RR      ++ R+ +  SLR    +  F E  +  +
Sbjct: 111 LPVQVFGEPEYPEETRLTYRFLDLRRDSLHQNMMLRSNVVRSLRNRMWDRGFTEFQTPII 170

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     +        Y L  +P+   + ++ AG ++ F  A  +R+ 
Sbjct: 171 TASSPEG---ARDFLVPSRLH---PGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDE 224

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P +F  L+   +    E +      +I+   E   +      N     + +  
Sbjct: 225 DPRADRSPTDFYQLDIEMSFVKQEDVFAAVQPVIQGLFEEFGKGKKVDPNWPLIAYRDAL 284

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
               ++       I +    ++       +     +  G  V
Sbjct: 285 KWYGSDKPDLRNPIKMADVSEHFKDSGFAIFAKLLENEGTEV 326



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 15/102 (14%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLA 311
           +  +++L     EL +       P      FE      +E++++     + +        
Sbjct: 475 YAYQYDLACNGYELVSGGIRNHRPDIMFKAFELAGYPKEEVEKRFGGMVKAF-------- 526

Query: 312 CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 527 -RYGAPPHGGCAAGIDRIVMLLADTANIREVIMFPMNQRAED 567


>gi|3549678|emb|CAA20589.1| putative aspartate--tRNA ligase [Arabidopsis thaliana]
 gi|7270325|emb|CAB80093.1| putative aspartate--tRNA ligase [Arabidopsis thaliana]
          Length = 636

 Score = 86.6 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 16/142 (11%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           D +   I         E N        L  +P       ++          +++    +E
Sbjct: 476 DHSKHSILWVTDFPMFEWNEPEQRLEAL-HHPFTAPKPEDMDDLPSARALAYDMVYNGVE 534

Query: 271 LCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAM 324
           +      +     Q    E      +E + K     E   +           P   GIA 
Sbjct: 535 IGGGSLRIYKRDVQEKVLEIIGISPEEAESKFGYLLEALDM---------GAPPHGGIAY 585

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           G DR+VM++ GA++I +VI  P
Sbjct: 586 GLDRMVMMLGGASSIRDVIAFP 607



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 60/182 (32%), Gaps = 41/182 (22%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHI 72
              + +  ++ R+ +   +R Y  +   FIE                             
Sbjct: 211 RRQQMKNNIVLRHNVVKLIRRYLEDRHGFIE----------------------------- 241

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
               Y L  SP+   + L+ +G +K +  A  +R+ +     QPEFT L+   A    E 
Sbjct: 242 SGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQPEFTQLDMEMAFMPMED 301

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           ++K   ++IR                          +T A+A  RY   D   T  + + 
Sbjct: 302 MLKLNEDLIRKVFSEIKG---------IQLPDPFPRLTYADAMDRY-GSDRPDTRFDLEL 351

Query: 192 PD 193
            D
Sbjct: 352 KD 353


>gi|118590155|ref|ZP_01547558.1| aspartyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118437127|gb|EAV43765.1| aspartyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 655

 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 62/193 (32%), Gaps = 19/193 (9%)

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQ-------QAGIRVAHDDTWSDIFSRILIE 224
           EA  +  N+D+G  +       +    + A+       + G        ++ I    + E
Sbjct: 445 EAIRKQLNLDIGDAVFFLGGKPKQFEPVAAKARVIIGEELGHTDKDRFEFAWIVDFPIYE 504

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
           + E    I+        P          P D     +++L     EL +       P   
Sbjct: 505 RDEETGEIDFSHNPFSMPQGGMEALEGDPLDV-LGYQYDLACNGHELISGAIRNHKPEIM 563

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
              FE               +D  F   +       P   G A G DR+VML+    NI 
Sbjct: 564 YKAFEI-------AGYPAEEVDRRFGGMVNAFQYGAPPHGGCAAGIDRMVMLMADEANIR 616

Query: 341 EVIWTPFSQSNQE 353
           EV+  P +Q  ++
Sbjct: 617 EVMLFPMNQKAED 629



 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 62/197 (31%), Gaps = 7/197 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ +   LR+      F E  +  +   SP      R F     +    
Sbjct: 134 RREKLHQNMILRSNVVRDLRDRMWNIGFNEFQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G +K F  A  +R+ +      P +F  L+   +  + + 
Sbjct: 189 GKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDMEMSFVTQQD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    E         +N     + +       +       I +    ++   
Sbjct: 249 VFDTIEPVIAGCFERFGNGRPVNRNWPQISYKDSALWYGTDKPDLRNPIKMEIVSEHFAG 308

Query: 192 PDRHLLYLQAQQAGIRV 208
               +     +Q G  +
Sbjct: 309 SGFAIFANLLEQPGTEI 325


>gi|259487051|tpe|CBF85413.1| TPA: Aspartyl-tRNA synthetase, hypothetical mitochondrial protein
           (Eurofung) [Aspergillus nidulans FGSC A4]
          Length = 679

 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 53/163 (32%), Gaps = 14/163 (8%)

Query: 194 RHLLYLQAQQAGIRVA----HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
           R  LY  A + G + A          D          EP  G         +P      A
Sbjct: 489 RRALYSAAVETGFKPAAVGFDFLWIVDFPLFSPSTDSEPGQGGAAGISSTHHPFTAPKSA 548

Query: 250 NIYP---ADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                   DP       ++L    +EL      + D   Q       +Q       E   
Sbjct: 549 ADVDLLLTDPTKVVADHYDLVVNGVELGGGSRRIHDAAVQEFVLRNVLQM----PPERLT 604

Query: 305 IDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                L  L    P  +G+A+GFDRLV ++ G +++ +VI  P
Sbjct: 605 EFSHLLEALRAGCPPHAGLALGFDRLVAVMLGKDSVRDVIAFP 647



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 75/205 (36%), Gaps = 25/205 (12%)

Query: 3   QIPSQPWWNRDFHY--RR----RPFLLKRNMIQSSLREYFVENQ---FIEIDSMSL-QYS 52
             P      +  H   R     R  L  R  +++  RE   E     F+EI++  L + +
Sbjct: 187 MAPDMVHPPKHRHLQLRTSSELREALEFRAQVRNVCREEL-EQGRPPFVEIETPLLFKST 245

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
           P      R F               L  SP+   + L+A+G  + + FA  +R+ +    
Sbjct: 246 PEG---AREFLVPTRKH---GLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRAD 299

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
            QPEFT L+   +  + E +M+    IIR        +++S       P      ++  +
Sbjct: 300 RQPEFTQLDLEMSFATGEDVMRVVEGIIR--------RLWSTLMDTEAPSGPFRRLSYQD 351

Query: 173 AFARYANIDLGTTLDNPDQPDRHLL 197
           A  RY +    T          HLL
Sbjct: 352 AMTRYGSDKPDTRYGMEIYRVEHLL 376


>gi|163853404|ref|YP_001641447.1| aspartyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163665009|gb|ABY32376.1| aspartyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 614

 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 61/183 (33%), Gaps = 18/183 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              +    ++KR  I  SLR    E  F E  +  L   SP     ++            
Sbjct: 144 RREKLHANIMKRGAIVDSLRRRMREGGFFEFQTPILTASSPEGARDYLVPSRVHPGKFYA 203

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   +  + AG ++ F  A  +R+ +      P EF  L+   +  + E
Sbjct: 204 LPQ------APQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVTQE 257

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            + +    ++R   E                  E   IT A+A  +Y  +D     +   
Sbjct: 258 DVFQAVEPVLRGVFEEFAG--------GKRVTKEFPRITYADAMLKY-GVDKPDLRNPLI 308

Query: 191 QPD 193
             D
Sbjct: 309 IAD 311



 Score = 76.2 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 52/162 (32%), Gaps = 17/162 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA------NIYPAD 255
            +  +       +  +    + E  E +  I+        P  +          +     
Sbjct: 432 DELKLSDTDQFAFCWVVDFPMYEWNEEDKKIDFSHNPFSMPNFDRDEFLALGEADSEKIL 491

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LAC 312
                ++++    IEL +       P      F      +         ++E F   L  
Sbjct: 492 EIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRD-------VLEEKFGGMLNA 544

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           L    P   GIA G DR+VML+    NI EV+  P +Q  ++
Sbjct: 545 LRLGAPPHGGIAPGVDRIVMLLCEEPNIREVVLFPMNQRAED 586


>gi|163868506|ref|YP_001609715.1| aspartyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|189082086|sp|A9IVI2|SYD_BART1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|161018162|emb|CAK01720.1| Aspartyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 597

 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 61/197 (30%), Gaps = 31/197 (15%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  +    ++R  I +++R     N F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETMHKNIMRRTEIIAAMRRAMQNNGFTEFSTPLL 169

Query: 50  Q-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      +            + +      +P+   + L+ +G ++ F  A  +R+ 
Sbjct: 170 TASSPEGARDFLVPSRVHQGKFYALPQ------APQQYKQLLMMSGFDRYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P EF  L+   +              +    E   + IF              
Sbjct: 224 DPRADRLPGEFYQLDVEMSFV--------EQEDVLATMEPIMRSIFEEFANGKTVTQNFP 275

Query: 167 YITVAEAFARYANIDLG 183
            I+  EA  +Y +    
Sbjct: 276 RISYDEAIQKYGSDKPD 292



 Score = 76.2 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 42/149 (28%), Gaps = 9/149 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +      + + I      E  E    I+        P                  +
Sbjct: 420 EELDLVDRECFSLAWIVDFPFFEWNEDEKKIDFAHNPFSMPQGGENALECQDPLTLKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQ 318
           ++L     E+ +       P      FE     KK         D             P 
Sbjct: 480 YDLVCNGYEIASGGIRNHLPEMMLKVFELVGLSKK------VVKDRFGALYRAFHYGAPP 533

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             G+A G DR++ML+ G  N+ EV   P 
Sbjct: 534 HGGMAAGIDRIIMLLQGVKNLREVALFPM 562


>gi|325972753|ref|YP_004248944.1| aspartyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027991|gb|ADY14750.1| aspartyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 598

 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 45/142 (31%), Gaps = 7/142 (4%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           IR A +  W  I    L E  E          +   P  E                ++L 
Sbjct: 428 IRKAFEFCW--IIDFPLFEYNEEGGHWEAAHHMFSMPQAEYLDTLESDPGSVKGDLYDLV 485

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAM 324
               E+ +    + D   Q+  F     +               L       P   GIA 
Sbjct: 486 LNGYEVASGSIRIHDVELQKRIFRICNFD----DKTAEERFGFLLNAFRYGPPPHGGIAP 541

Query: 325 GFDRLVMLVTGANNINEVIWTP 346
           G DR+VM+++   +I+EVI  P
Sbjct: 542 GVDRMVMIMSEQTSIHEVIAFP 563



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 64/208 (30%), Gaps = 25/208 (12%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSM-SLQY 51
           QI        D   + R            L  R+    + R+Y     F EI++   ++ 
Sbjct: 119 QIDDGKETREDLRLKYRYLDLRSQGMQQRLKLRHDFILACRKYLSSRDFYEIETPTMIKS 178

Query: 52  SPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
           +P      R F     I  +  K   L  SP+   + L+  G +K F  A  +R+ +   
Sbjct: 179 TPEGA---RDFLVPSRI--YAGKFYALPQSPQLFKQILMVGGMDKYFQIARCYRDEDARG 233

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
             Q EFT L+   +            +++     + N       N      +    +T  
Sbjct: 234 DRQLEFTQLDVEMSFV-------KRDDVLSLMEGLFNSVFREVMNYELP--ARFRRLTYN 284

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +A   Y         D P      L   
Sbjct: 285 DALNTYGCDKPDLRFDVPLCDVNELAQK 312


>gi|289812475|ref|ZP_06543104.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 216

 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 13/71 (18%)

Query: 1   MHQIPSQPWW--NRDFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R+ I + +R++ V   F+E+++ 
Sbjct: 145 LRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKTRSKILAGIRQFMVARGFMEVETP 204

Query: 48  SLQYSPGNETH 58
            +Q  PG  + 
Sbjct: 205 MMQVIPGGASA 215


>gi|160893895|ref|ZP_02074674.1| hypothetical protein CLOL250_01449 [Clostridium sp. L2-50]
 gi|156864273|gb|EDO57704.1| hypothetical protein CLOL250_01449 [Clostridium sp. L2-50]
          Length = 608

 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + + +  ++ R+ + S LR+   E  F+EI +  L   SP      R +          
Sbjct: 159 RNKKVKDNMIFRSQVISFLRQKMTEMGFLEIQTPILCASSPEG---ARDYIVPSRK---F 212

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           +   Y L  +P+   + L+ AG +K F  A  +R+ +      P EF  L++  +  + E
Sbjct: 213 KGKFYALPQAPQQYKQLLMVAGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMSFATQE 272

Query: 131 QLMKDCMNIIRCAA 144
            + K    ++    
Sbjct: 273 DVFKVGEEVLSATF 286



 Score = 78.5 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 21/184 (11%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D    + + ++           + G R+   +  +  F  I    +          I   
Sbjct: 412 DTIFFIADVEELAASFAGQLRNEIGARLDMIEKNAYRFCYINDFPMYEYDKETKKIIFTH 471

Query: 241 YPAPESA-----LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------ 289
            P          L    P D     ++++    IEL +      D       FE      
Sbjct: 472 NPFSMPQGGLEALNEKNPLDV-LAYQYDIVCNGIELSSGAVRNHDMQIMVKAFEIAGYTE 530

Query: 290 KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           ++++ K       +             P  +G+A G DR++ML+    NI E+I  P + 
Sbjct: 531 EDLKTKFGALYNAFQF---------GAPPHAGMAPGVDRMIMLLRNEENIREIIPFPMNG 581

Query: 350 SNQE 353
           + Q+
Sbjct: 582 NAQD 585


>gi|329123659|ref|ZP_08252219.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327469858|gb|EGF15323.1| aspartate--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 93

 Score = 86.2 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 289 EKEMQEKKKIYNETYPIDED--FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            ++   +    +E    ++    L  L    P  +G+A G DRL ML+TG  NI +VI  
Sbjct: 1   MQQTVFRILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAF 60

Query: 346 P 346
           P
Sbjct: 61  P 61


>gi|146340332|ref|YP_001205380.1| aspartyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|166225323|sp|A4YTC4|SYD_BRASO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146193138|emb|CAL77150.1| Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase
           (Aspartate-/asparagine-tRNA ligase) (AspRS)
           [Bradyrhizobium sp. ORS278]
          Length = 590

 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 58/187 (31%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    ++ R  I  S+R    E  F E  +  L   SP      R F     I    
Sbjct: 134 RRDRLHQNIMTRGAIIDSMRRRMKEQGFFEFQTPILTASSPEG---ARDFLVPSRIH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                   +  A E     +F               I  AEA  +Y   D     +  + 
Sbjct: 245 ----EQEDVFAAMEPVITGVFEDFAKGKPVTKGWPRIPFAEALRKY-GTDKPDLRNPLEM 299

Query: 192 PDRHLLY 198
            D    +
Sbjct: 300 QDVSEHF 306



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 44/149 (29%), Gaps = 9/149 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I    + E  E +  ++        P                  +
Sbjct: 416 EELNLIDKDRFALAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGLEALTTKDPLTIKAFQ 475

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQ 318
           +++     E+ +       P      FE         Y E   +D             P 
Sbjct: 476 YDIACNGYEIASGGIRNHKPEAMVKAFEI------AGYGEQEVVDRFGGMYRAFQYGAPP 529

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             G+A G DR+VML+ G  N+ E+   P 
Sbjct: 530 HGGMAAGVDRIVMLLCGTTNLREISLFPM 558


>gi|49474342|ref|YP_032384.1| aspartyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|62287556|sp|Q6FZI4|SYD_BARQU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49239846|emb|CAF26239.1| Aspartyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 597

 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 63/196 (32%), Gaps = 29/196 (14%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  +    ++R  I +++R     N F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETMHKNIMRRTEIITAIRRSMQNNGFTEFTTPLL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     I     K   L  +P+   + L+ +G ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRIH--QGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +              +    E   + IF               
Sbjct: 225 PRADRLPGEFYQLDVEMSFV--------EQEDVFVTMEPIMRSIFEEFANGKPVTQNFPR 276

Query: 168 ITVAEAFARYANIDLG 183
           I+  EA  +Y +    
Sbjct: 277 ISYDEAIKKYGSDKPD 292



 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 42/150 (28%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +      + + I      E  E    ++        P                  +
Sbjct: 420 EELDLIDRECFSLAWIVDFPFFEWNEDEKKLDFAHNPFSMPQGGKNALECQDPLTLKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P      F                +++ F           P
Sbjct: 480 YDLVCNGYEIASGGIRNHSPEMMLKVF-------NLAGLSREVVEDRFGALYRAFHYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR++ML+ G  N+ E+   P 
Sbjct: 533 PHGGMAAGVDRIIMLLQGVKNLREIALFPM 562


>gi|163815548|ref|ZP_02206921.1| hypothetical protein COPEUT_01713 [Coprococcus eutactus ATCC 27759]
 gi|158449185|gb|EDP26180.1| hypothetical protein COPEUT_01713 [Coprococcus eutactus ATCC 27759]
          Length = 583

 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + + +  ++ R+ + S LR+   E  F+EI +  L   SP      R +          
Sbjct: 134 RNKKVKDNMIFRSQVISYLRQKMTEMGFLEIQTPILCASSPEG---ARDYIVPSRK---F 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           +   Y L  +P+   + L+ +G +K F  A  +R+ +      P EF  L++  +  + E
Sbjct: 188 KGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMSFATQE 247

Query: 131 QLMKDCMNIIRCAA 144
            + K    ++    
Sbjct: 248 DVFKVGEEVLSATF 261



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 59/182 (32%), Gaps = 17/182 (9%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D    + +  +           + G R+  ++  +  F  I    +      +   I   
Sbjct: 387 DTIFFIADTPEIAASFAGQIRVELGNRLDLNEKNAFRFCYINDFPMYEYDKESKKIIFTH 446

Query: 241 YPAPESA--LANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEK----EM 292
            P       L  +   DP      ++++    IEL +      D       FE     E 
Sbjct: 447 NPFSMPQGGLEALNEKDPLDILAYQYDIVCNGIELSSGAVRNHDMKIMVKAFEIAGYTED 506

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
             K+K                    P  +G+A G DR++ML+    NI EVI  P + + 
Sbjct: 507 DLKEKFG--------ALYNAFQFGAPPHAGMAPGVDRMIMLLRNEENIREVIPFPMNGNA 558

Query: 352 QE 353
           Q+
Sbjct: 559 QD 560


>gi|254441702|ref|ZP_05055195.1| tRNA synthetase class II (D, K and N) subfamily [Octadecabacter
           antarcticus 307]
 gi|198251780|gb|EDY76095.1| tRNA synthetase class II (D, K and N) subfamily [Octadecabacter
           antarcticus 307]
          Length = 617

 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 64/198 (32%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  +  R+ + SS+R+   +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKMQKNMKLRSDVVSSMRKRMWDKGFREFQTPIITSSSPEG---ARDFLIPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +    +
Sbjct: 188 PGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVEQQ 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      +I    E         Q      + +      ++       I +    ++  
Sbjct: 248 DVFDTIQPVITGIFEEFGNGRNVDQTWEQISYRDAALWYGSDKPDLRNPIKMQVVSEHFR 307

Query: 191 QPDRHLLYLQAQQAGIRV 208
                +     +Q G  V
Sbjct: 308 DSGFAIFAKLLEQDGTEV 325



 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 16/158 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            + G+   +   ++ I    + E+      I+        P    A  +  P D     +
Sbjct: 444 DELGLTDLNRFAFAWIVDFPIYERDAETGKIDFEHNPFSMPQGGMAALDGKPEDV-LGYQ 502

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTE 315
           ++L     EL +       P      FE       E++++       +            
Sbjct: 503 YDLACNGYELVSGAIRNHRPEIMFKAFEIAGFGKDEVEKRFGGMVNAFQ---------YG 553

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+  A+N+ +VI  P +Q  ++
Sbjct: 554 APPHGGCAAGVDRIVMLLADADNLRDVIMFPMNQRAED 591


>gi|115903663|ref|XP_785385.2| PREDICTED: similar to Pleckstrin homology domain containing, family A
            (phosphoinositide binding specific) member 1
            [Strongylocentrotus purpuratus]
 gi|115966295|ref|XP_001176071.1| PREDICTED: similar to Pleckstrin homology domain containing, family A
            (phosphoinositide binding specific) member 1
            [Strongylocentrotus purpuratus]
          Length = 1461

 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 9/99 (9%)

Query: 251  IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
                DP+++  ++ +    E+ +    + D      R +    + +KI        + ++
Sbjct: 1365 PRDEDPQYSNSYDCFMRGEEIMSGAQRVHDSKFLLERAKHHNIDIEKI--------KAYI 1416

Query: 311  ACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                   P  +G  +G +R+ ML  G +NI +    P  
Sbjct: 1417 DAFRYGAPPHAGGGIGLERVTMLYLGLDNIRKTSLFPRD 1455


>gi|76664737|emb|CAJ17808.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 225

 Score = 86.2 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 44/98 (44%), Gaps = 8/98 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
            +   + FL++R+ I  S+R+  ++N F+E+++  L   +P     ++            
Sbjct: 132 RNPDIKYFLIQRHHITQSIRQTLLKNDFLELETPILSKSTPEGARDYLVPSRIYPGNFYA 191

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
           + +      SP+   +  + AG E+ F  A  +R+ + 
Sbjct: 192 LPQ------SPQLFKQLYMIAGFERYFQVARCFRDEDL 223


>gi|67522507|ref|XP_659314.1| hypothetical protein AN1710.2 [Aspergillus nidulans FGSC A4]
 gi|40745674|gb|EAA64830.1| hypothetical protein AN1710.2 [Aspergillus nidulans FGSC A4]
          Length = 658

 Score = 86.2 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 53/163 (32%), Gaps = 14/163 (8%)

Query: 194 RHLLYLQAQQAGIRVA----HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
           R  LY  A + G + A          D          EP  G         +P      A
Sbjct: 468 RRALYSAAVETGFKPAAVGFDFLWIVDFPLFSPSTDSEPGQGGAAGISSTHHPFTAPKSA 527

Query: 250 NIYP---ADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                   DP       ++L    +EL      + D   Q       +Q       E   
Sbjct: 528 ADVDLLLTDPTKVVADHYDLVVNGVELGGGSRRIHDAAVQEFVLRNVLQM----PPERLT 583

Query: 305 IDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                L  L    P  +G+A+GFDRLV ++ G +++ +VI  P
Sbjct: 584 EFSHLLEALRAGCPPHAGLALGFDRLVAVMLGKDSVRDVIAFP 626



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 75/205 (36%), Gaps = 25/205 (12%)

Query: 3   QIPSQPWWNRDFHY--RR----RPFLLKRNMIQSSLREYFVENQ---FIEIDSMSL-QYS 52
             P      +  H   R     R  L  R  +++  RE   E     F+EI++  L + +
Sbjct: 166 MAPDMVHPPKHRHLQLRTSSELREALEFRAQVRNVCREEL-EQGRPPFVEIETPLLFKST 224

Query: 53  PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
           P      R F               L  SP+   + L+A+G  + + FA  +R+ +    
Sbjct: 225 PEG---AREFLVPTRKH---GLAYALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRAD 278

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
            QPEFT L+   +  + E +M+    IIR        +++S       P      ++  +
Sbjct: 279 RQPEFTQLDLEMSFATGEDVMRVVEGIIR--------RLWSTLMDTEAPSGPFRRLSYQD 330

Query: 173 AFARYANIDLGTTLDNPDQPDRHLL 197
           A  RY +    T          HLL
Sbjct: 331 AMTRYGSDKPDTRYGMEIYRVEHLL 355


>gi|256369184|ref|YP_003106692.1| aspartyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|255999344|gb|ACU47743.1| aspartyl-tRNA synthetase [Brucella microti CCM 4915]
          Length = 595

 Score = 86.2 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 76/223 (34%), Gaps = 22/223 (9%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L K    R  I +++R    E  F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     I     K   L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRIH--PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E++ +    ++R   E   +     +      + +   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIR 284

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL-QAQQAGIRVA 209
              ++       I++    D+  +    +     A  A + V 
Sbjct: 285 TYGSDKPDLRNPIEMQAVTDHFARSGFKVFANMIANDAKVEVW 327



 Score = 80.5 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 48/150 (32%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E N  I+        P                  +
Sbjct: 420 EELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSMPQGGMDALENMDPLEIKAYQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P       E  ++  +K+      ++E F           P
Sbjct: 480 YDLVCNGFEIASGSIRNQLP-------EVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR++ML+ GA N+ E+   P 
Sbjct: 533 PHGGMAAGIDRVIMLLVGAKNLREISLFPM 562


>gi|84685295|ref|ZP_01013193.1| aspartyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84666452|gb|EAQ12924.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 592

 Score = 86.2 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 73/221 (33%), Gaps = 21/221 (9%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +++        YR    RR  + +    R+ + +S+R+   +  F E  +  +
Sbjct: 110 LPLMVFGDQEYPEETRLRYRYLDLRREEMQRNITLRSDVIASMRKRMWDQGFREYQTPII 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     +     K   L  +P+   + ++ +G +K F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRLH--PGKFYALPQAPQLFKQLIMVSGFDKYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P +F  L+   +    + +      +I+   E                +++   
Sbjct: 225 PRADRSPTDFYQLDLEMSFVEQQDIFDTIQPVIQGVFEEFGGGRKVDTTWEQISYADSAL 284

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
               +       I +    ++       +     +Q G  +
Sbjct: 285 WYGTDKPDLRNPIKMQVVSEHFAGSGFAIFAKLLEQDGTEI 325



 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 49/156 (31%), Gaps = 13/156 (8%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT-- 259
           ++ G+       ++ I    + E  E    I+        P       +    DP     
Sbjct: 419 EELGLTDMDRFAFAWIVDFPMYENDEETGDID----FSHNPFSMPQNLDDLDGDPLAVLG 474

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK-IYNETYPIDEDFLACL-TEMP 317
            +++L     EL +              FE     K     +E                P
Sbjct: 475 YQYDLACNGYELISGAIRNHKREVMFRVFE-----KAGYGQDEVLKRFGGLATAFQYGAP 529

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G A G DR+VML+    NI EV+  P +Q  ++
Sbjct: 530 PHGGCAAGIDRIVMLLADEANIREVMMFPMNQRAED 565


>gi|323455951|gb|EGB11818.1| hypothetical protein AURANDRAFT_70646 [Aureococcus anophagefferens]
          Length = 264

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 77/263 (29%), Gaps = 14/263 (5%)

Query: 91  AAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ 149
            A  E+I+     +R  +     H  EFT L++  A   +   +    + +      + +
Sbjct: 5   CADFERIYEIGPVFRAEDSNTRRHLCEFTGLDFEMAIYEHYYEILHVFSELFAHIFSSLE 64

Query: 150 KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
             F+ +    +     E         R +  +    L      +            +   
Sbjct: 65  SKFAKELGIISQVYPFEPFKFLPKALRISFAEGIELLRAAGVTEEMQGS----FDDLSTE 120

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
           ++ T  DI            +     +I   Y  P+       P   + +  F+++    
Sbjct: 121 NEKTLGDIVKAKYGTDFF-IMDKYPLSIRPFYTMPDPETYGKVPPAQQLSNSFDMFMRGQ 179

Query: 270 ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED---FLACL-TEMPQSSGIAMG 325
           E+ +    + D      R    +           P  ED   +            G  +G
Sbjct: 180 EIVSGAQRVHDHALLMER----VNFCHSGGGHGGPAPEDIKGYTDAFKYGAFPHGGGGVG 235

Query: 326 FDRLVMLVTGANNINEVIWTPFS 348
            +R+VML  G  NI +V   P  
Sbjct: 236 LERVVMLYLGLTNIRKVSCFPRD 258


>gi|126739917|ref|ZP_01755608.1| aspartyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719149|gb|EBA15860.1| aspartyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 617

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 63/198 (31%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  ++ R  +  S+R+   +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKMQRNMVLRANMIQSIRKRMWDKGFNEYQTPIITASSPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +  + +
Sbjct: 188 PGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVTQQ 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      +++   E   +            + +       +       I +    ++  
Sbjct: 248 DVFDTIQPVMQGVFEEFGKGRKVDSEWPQISYKDAAKWYGTDKPDLRNPIKMQDCSEHFR 307

Query: 191 QPDRHLLYLQAQQAGIRV 208
                +     +  G  V
Sbjct: 308 GSGFAIFASLLENEGTEV 325



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 16/158 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  I    + EK E    I+        P          P   +   +
Sbjct: 444 EELGLVDKDRFAFCWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALLTDPLAVKG-YQ 502

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTE 315
           ++L     EL +       P      FE      +E++++       +            
Sbjct: 503 YDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQ---------YG 553

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 554 APPHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAED 591


>gi|240281700|gb|EER45203.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 637

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 22/139 (15%)

Query: 227 EPNLGINCCTILDRYPAPESALANI-----YPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P       +                ++L    +EL      +   
Sbjct: 483 EPGQGGAAGIASTHHPFTAPLRKSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSA 542

Query: 282 IEQRHRFEKEMQEKKKIYNETYPID-----EDFLACL-TEMPQSSGIAMGFDRLVMLVTG 335
             Q       ++          P D        L  L    P  +GIA+GFDRLV ++ G
Sbjct: 543 AVQEFILRDILK---------MPADRLADFSHLLEALRAGCPPHAGIALGFDRLVAVMLG 593

Query: 336 ANNINEVIWTPFSQSNQEE 354
             ++ +VI  P  +S + E
Sbjct: 594 KESLRDVIAFP--KSGKGE 610



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 18/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  LL R   ++ LRE   E Q  F+EI++  L + +P      R F      +      
Sbjct: 167 RDALLFRARARNVLREALEECQLPFVEIETPLLFKSTPEG---AREFLVPTRRR---GMA 220

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 221 YALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLDLEMSFAT------- 273

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E A ++++S       P      ++  +A A+Y   D        +     
Sbjct: 274 -GEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKY-GSDKPDVRIGMEIKRIE 331

Query: 196 LL 197
            +
Sbjct: 332 NM 333


>gi|225027158|ref|ZP_03716350.1| hypothetical protein EUBHAL_01414 [Eubacterium hallii DSM 3353]
 gi|224955622|gb|EEG36831.1| hypothetical protein EUBHAL_01414 [Eubacterium hallii DSM 3353]
          Length = 583

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + + +  ++ R+ + S LR+   +  F+EI +  L   SP      R +        + 
Sbjct: 134 RNKKVKDNMIFRSKVISFLRQKMTDMGFLEIQTPILCASSPEG---ARDYIVPSRK--YK 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G +K F  A  +R+ +      P EF  L++  +  + E 
Sbjct: 189 GKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMSFATQED 248

Query: 132 LMKDCMNII 140
           + +    ++
Sbjct: 249 VFRVGEEVL 257



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 51/163 (31%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            L     Q+  +   +   +  I    + E  E    I         P            
Sbjct: 405 QLRNELGQRLDLLEKNAYRFCFINDFPMYEYDEEQKKIIFTHNPFSMPQGGLEALTTKDP 464

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++    +EL +      +       FE         Y E   + E F     
Sbjct: 465 LELLAYQYDIVCNGVELSSGAVRNHNLDIMVKAFEI------AGYTEE-DLKEKFGALYN 517

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P  +G+A G DR++ML+    NI EVI  P + + Q+
Sbjct: 518 AFQYGAPPHAGMAPGVDRMIMLLRNEENIREVIPFPMNGNAQD 560


>gi|150396026|ref|YP_001326493.1| aspartyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166225432|sp|A6U7M8|SYD_SINMW RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|150027541|gb|ABR59658.1| aspartyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 595

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 22/223 (9%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    ++R  I +++R    +  F E  +  L 
Sbjct: 111 PLPVFGEPDYPEDVRLKYRFLDLRRETLHKNIVRRTEIIAAMRRRMSDIGFTEYTTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRIH---PGNFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRC-AAEVANQKIFSFQNVNCNPFSEPE 166
                 P EF  L+   +    E +      +IR   A+ A  K  + +       +   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVEQEDVWDAMEPMIRAIFADFAGGKPVTDKFPRIPYDAAIR 284

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                +   R        T        +    + A    + + 
Sbjct: 285 KYGSDKPDLRNPIEMQEVTEHFAGSGFKVFANMIASNPKVEIW 327



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 48/166 (28%), Gaps = 17/166 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +          I      E  E    ++        P       +    
Sbjct: 413 EARTRAGEELNLVDRERYELCWIVDFPFYEWNEEEKRVDFAHNPFSMPQGGLTALSSDDL 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                 ++++     E+ +       P      FE       +++E+             
Sbjct: 473 LSIKAFQYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEERFGG---------- 522

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                    P   G+A G DR+VML+ GA N+ E+   P +Q  Q+
Sbjct: 523 LYRAFQYGAPPHGGMAFGIDRIVMLLVGAKNLREISLFPMNQQAQD 568


>gi|325087845|gb|EGC41155.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 637

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 22/139 (15%)

Query: 227 EPNLGINCCTILDRYPAPESALANI-----YPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P       +                ++L    +EL      +   
Sbjct: 483 EPGQGGAAGIASTHHPFTAPLRKSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSA 542

Query: 282 IEQRHRFEKEMQEKKKIYNETYPID-----EDFLACL-TEMPQSSGIAMGFDRLVMLVTG 335
             Q       ++          P D        L  L    P  +GIA+GFDRLV ++ G
Sbjct: 543 AVQEFILRDILK---------MPADRLADFSHLLEALRAGCPPHAGIALGFDRLVAVMLG 593

Query: 336 ANNINEVIWTPFSQSNQEE 354
             ++ +VI  P  +S + E
Sbjct: 594 KESLRDVIAFP--KSGKGE 610



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 69/182 (37%), Gaps = 18/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  LL R   ++ LRE   E Q  F+EI++  L + +       R F      +      
Sbjct: 167 RDALLFRARARNILREALEECQLPFVEIETPLLFKSTLEG---AREFLVPTRRR---GMA 220

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 221 YALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLDLEMSFAT------- 273

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E A ++++S       P      ++  +A A+Y   D        +     
Sbjct: 274 -GEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKY-GSDKPDVRIGMEIKRIE 331

Query: 196 LL 197
            +
Sbjct: 332 NM 333


>gi|259418879|ref|ZP_05742796.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345101|gb|EEW56955.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 594

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 60/172 (34%), Gaps = 13/172 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  ++ R+ +  S+R    +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKMQRNMVLRSNMIRSIRNRMWDQGFNEYQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +  + + 
Sbjct: 189 GKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDMEMSFVTQQD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +      +I    E         Q    +  +E   I+  +A   Y +    
Sbjct: 249 VFDTIAPVIAGVFEEFG------QGRKVDAANEWPQISYKDAALWYGSDKPD 294



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 54/158 (34%), Gaps = 16/158 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +       ++ I    + E  E    I+        P       N  P D R  + 
Sbjct: 421 EELNLTDKDRFAFAWIVDFPIYEADEETGKIDFEHNPFSMPQGGMDALNGDPLDVRGNQ- 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTE 315
           ++L     EL +       P      FE      +E++++       +            
Sbjct: 480 YDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQ---------YG 530

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 531 APPHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAED 568


>gi|99080476|ref|YP_612630.1| aspartyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|123379042|sp|Q1GIZ8|SYD_SILST RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|99036756|gb|ABF63368.1| aspartyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 594

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 60/172 (34%), Gaps = 13/172 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  ++ R+ +  S+R    +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKMQRNMVLRSNMIRSIRNRMWDQGFNEYQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +  + + 
Sbjct: 189 GKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDMEMSFVTQQD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +      +I    E         Q    +  +E   I+  +A   Y +    
Sbjct: 249 VFDTIAPVIAGVFEEFG------QGRKVDAPNEWPQISYKDAALWYGSDKPD 294



 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 55/158 (34%), Gaps = 16/158 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +       ++ I    + EK E    I+        P       N  P D R  + 
Sbjct: 421 EELNLTDKDRFAFAWIVDFPIYEKDEETGKIDFEHNPFSMPQGGMDALNGDPLDVRGNQ- 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTE 315
           ++L     EL +       P      FE      +E++++       +            
Sbjct: 480 YDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQ---------YG 530

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 531 APPHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAED 568


>gi|56416504|ref|YP_153578.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|56387736|gb|AAV86323.1| asparaginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 325

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 50/150 (33%), Gaps = 12/150 (8%)

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           + HD             K E      C            AL    P D     ++++   
Sbjct: 158 IEHDTFKFCWIVDFPYFKCEDGELDFCHNPFSMPQGEMEALEQQNPLDI-IAYQYDIVCN 216

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACLT-EMPQSSGIA 323
            IE+ +              F          Y+E   ++  F   +       P   G+A
Sbjct: 217 GIEISSGAIRNHRLDVMYKAFSM------VGYDE-QTVNSKFGALVRAFKFGAPPHGGLA 269

Query: 324 MGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            G DR+VML+  A NI EVI  P +Q+ ++
Sbjct: 270 PGIDRIVMLLADAPNIREVICFPLNQTGED 299


>gi|291520810|emb|CBK79103.1| aspartyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 583

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 62/156 (39%), Gaps = 23/156 (14%)

Query: 2   HQIPSQPWWNRDFHYRRR--------------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           HQ+P +   +++     R                ++ R+ + S LR+   E  F+EI + 
Sbjct: 108 HQLPFEIMTSKEIREDVRLKYRYLDLRNQKVKDNIIFRSQVISFLRQKMTEMGFLEIQTP 167

Query: 48  SL-QYSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
            L   SP      R +          +   Y L  +P+   + L+ +G +K F  A  +R
Sbjct: 168 ILCASSPEG---ARDYIVPSRK---FKGRFYALPQAPQQYKQLLMVSGFDKYFQIAPCFR 221

Query: 106 NGEQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNII 140
           + +      P EF  L++  +  + E++ +    ++
Sbjct: 222 DEDARADRSPGEFYQLDFEMSFATQEEVFRVGEEVL 257



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 72/203 (35%), Gaps = 22/203 (10%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDN-PDQPDRHLLYL--QAQQAGIRVAHDDTWSDIFSR 220
           +     + + FA    +++G T+    D+ +R  L+      + G R+   +  +  F  
Sbjct: 367 KFIPDDMKQEFAELTGLEVGDTIFFIADKEERANLFAGQLRNELGERLDLIEKNAFRFCF 426

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRF--TKRFELYACNIELCNACD 276
           +    +               P       L  +   +P      ++++    +EL +   
Sbjct: 427 VNDFPMYEYNKDEKKMDFTHNPFSMPQGGLEALNTMNPEDILAYQYDIVCNGVELSSGAV 486

Query: 277 ELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLV 330
              D       FE      ++++ K       +             P  +G+A G DR++
Sbjct: 487 RNHDLDIMVKAFEIAGYSEEDLKTKFGALYNAFQF---------GAPPHAGMAPGVDRMI 537

Query: 331 MLVTGANNINEVIWTPFSQSNQE 353
           ML+   +NI EVI  P + + Q+
Sbjct: 538 MLLRNEDNIREVIAFPMNGNAQD 560


>gi|255284348|ref|ZP_05348903.1| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255265090|gb|EET58295.1| aspartate--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 581

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 9/130 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + + +  ++ R+ + S LR+   E  F+EI +  L   SP      R +          
Sbjct: 132 RNKKVKDNIIFRSQVISFLRQKMTELGFLEIQTPILCASSPEG---ARDYIVPSRK---F 185

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           +   Y L  +P+   + L+ +G +K F  A  +R+ +      P EF  L++  +  + E
Sbjct: 186 KGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMSFATQE 245

Query: 131 QLMKDCMNII 140
           ++ K    ++
Sbjct: 246 EVFKVGEEVL 255



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 65/197 (32%), Gaps = 22/197 (11%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ---QAGIRVAHDDTWSDIFSR 220
           +     + E FA+ A + +G T+      +    Y       + G ++   +  +  F  
Sbjct: 365 KFIPEELKEEFAQLAGLSVGDTIFFMADKEERAAYYAGMIRTELGEKLDLLEKNAYRFCY 424

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESA-----LANIYPADPRFTKRFELYACNIELCNAC 275
           +    +               P          L  + P D     ++++    +EL +  
Sbjct: 425 VNDFPMFEKEPQTKQIGFTHNPFSMPQGGLEALETMNPLDV-LAYQYDIVCNGVELSSGA 483

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-----EMPQSSGIAMGFDRLV 330
               D    +  FE         Y+E   +   F   L        P  +G+A G DR++
Sbjct: 484 VRNHDMRIMKKAFEI------AGYDEE-VLKSKFG-ALYNAFCFGAPPHAGMAPGIDRML 535

Query: 331 MLVTGANNINEVIWTPF 347
           ML+    NI EVI  P 
Sbjct: 536 MLLKNEENIREVIAFPM 552


>gi|261417215|ref|YP_003250898.1| aspartyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373671|gb|ACX76416.1| aspartyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 597

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 28/200 (14%)

Query: 13  DFHYRRRPFLLKR----------NMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIR 60
           D   + R   L+R          +    ++ ++F  N F  I++  L + +P     ++ 
Sbjct: 126 DLRLQYRYLDLRRPWIQKKLLLKSRFLKAVYDFFYSNGFENIETPCLCKSTPEGARDYLV 185

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ AG ++ F  A  +R+ +     QPEFT +
Sbjct: 186 PSRVNPGKFYALPQ------SPQQYKQLLMIAGMDRYFQIAKCFRDEDLRADRQPEFTQI 239

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++M+     +                 N  P      +  AEA  +Y   
Sbjct: 240 DVEMSFVNQDEVMEMFDKFVTEVLGKV---------WNFEPPRHIRRMKWAEAMLKY-GS 289

Query: 181 DLGTTLDNPDQPDRHLLYLQ 200
           D      + +  D   +  +
Sbjct: 290 DKPDLRFDLEIHDVSEIGAK 309



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 52/178 (29%), Gaps = 22/178 (12%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D+   +  P++     +     +        D     F  I    +          +   
Sbjct: 393 DMMFFIAGPEKIAATAMGQLRLEVARIKGLRDPKKREFVWITEFPMFEYSDTEGRYMAMH 452

Query: 241 YP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------E 289
           +P          +           + ++L    +E+      + +P  Q   F      E
Sbjct: 453 HPFTNPLPEHLDMMLGGNLKDCNAEAYDLVLNGVEIGGGSIRIHNPEVQEKVFRLLGLSE 512

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           ++++ K             F+       P   G+A G DR+V  + G  +I + I  P
Sbjct: 513 EQVKTKFG----------FFVDAFKYGAPPHGGLAFGLDRVVATMEGEESIRDYIAFP 560


>gi|167768598|ref|ZP_02440651.1| hypothetical protein CLOSS21_03157 [Clostridium sp. SS2/1]
 gi|167710122|gb|EDS20701.1| hypothetical protein CLOSS21_03157 [Clostridium sp. SS2/1]
          Length = 572

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 8/135 (5%)

Query: 13  DFHYRR-RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQD 70
           D   R+ +  +L R+ +   LRE   +  F+E+ +  L   SP      R +        
Sbjct: 121 DMRNRKVKDNILFRSKVIRFLREKMEDMGFVEVQTPILCASSPEG---ARDYVVPSRK-- 175

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESY 129
           +  K   L  +P+   + L+ +G +K +  A  +R+ +      P EF  L++  A  + 
Sbjct: 176 YKGKFYALPQAPQQYKQLLMVSGIDKYYQIAPCFRDEDARADRSPGEFYQLDFEMAFATQ 235

Query: 130 EQLMKDCMNIIRCAA 144
           E + K    ++    
Sbjct: 236 EDVFKIGEEVLTETF 250



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 16/200 (8%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ---QAGIRVAHDDTWSDIFSR 220
           +     +    A  A +  G T+     P++       Q   + G R+   +  +  F  
Sbjct: 356 KFIPDDMKMELAEMAGLQEGDTIFFIAAPEKAACIYAGQIRNELGSRLDLLEKDAYRFCY 415

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRF--TKRFELYACNIELCNACD 276
           I    +               P       L  +   DP      ++++    +EL +   
Sbjct: 416 INDFPMYEIDEETGKLGFTHNPFSMPQGGLEALNEKDPLDILAYQYDIVCNGVELSSGAV 475

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACLT-EMPQSSGIAMGFDRLVMLV 333
              D       F+         Y++    D+            P  +G+A G DR++ML+
Sbjct: 476 RNHDMEIMEKAFDI------AGYDKETLKDKFGALYNAFQFGAPPHAGMAPGVDRMIMLL 529

Query: 334 TGANNINEVIWTPFSQSNQE 353
               NI E+I  P S + Q+
Sbjct: 530 RNEENIREIIAFPMSGTAQD 549


>gi|239831579|ref|ZP_04679908.1| aspartyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239823846|gb|EEQ95414.1| aspartyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 648

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 23/202 (11%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L K    R  I +++R    E  F E  +  L
Sbjct: 163 LPLPVFGEPDYPEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFTTPIL 222

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ 
Sbjct: 223 TASSPEG---ARDFLVPSRIH---PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDE 276

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P EF  L+   +  + E++ +    ++R   E   +     Q      + +  
Sbjct: 277 DPRADRLPGEFYQLDLEMSFVTQEEVWETMEPVMRGIFEEFAEGKPVTQKFRRIAYDDAI 336

Query: 167 YITVAEAFARYANIDLGTTLDN 188
               ++       I++    ++
Sbjct: 337 RTYGSDKPDLRNPIEMQAVTEH 358



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E N  ++        P                  +
Sbjct: 473 EELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENQDPLAIKAYQ 532

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P      FE       K+      ++E F           P
Sbjct: 533 YDLVCNGFEIASGSIRNQLPDVMVKAFE-------KVGLSQQDVEERFGGLYRAFQYGAP 585

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR++ML+ GA N+ E+   P 
Sbjct: 586 PHGGMAAGIDRVIMLLVGAKNLREISLFPM 615


>gi|110633475|ref|YP_673683.1| aspartyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|123162516|sp|Q11JA7|SYD_MESSB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|110284459|gb|ABG62518.1| aspartyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 594

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 66/196 (33%), Gaps = 29/196 (14%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L    L R  I + +R+   E+ F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETLHRNILARTKIIAEMRKRMAESGFTEFSTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     +     K   L  +P+   + ++ +G ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRLH--QGKFYALPQAPQIYKQLIMVSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E +      ++R   E   +              +   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVTQEDVFSTMEPVMRGIFEAFAE--------GKPVTQKLPR 276

Query: 168 ITVAEAFARYANIDLG 183
           I   EA  +Y +    
Sbjct: 277 IPYDEAMRKYGSDKPD 292



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 45/150 (30%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E    I         P                  +
Sbjct: 420 EELNLVDRDRFELAWIVDFPFYEWNEDEKRIEFGHNPFSMPQGGMEALENQEPLSIKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P       E  ++  +    +   ++E F           P
Sbjct: 480 YDLVCNGFEIASGGIRNHMP-------ELMVKAFEVAGFDRQMVEERFGGLYRAFQYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR+VML+ GA N+ E+   P 
Sbjct: 533 PHGGMAAGIDRIVMLLRGAKNLREITMFPM 562


>gi|12851415|dbj|BAB29032.1| unnamed protein product [Mus musculus]
          Length = 251

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 83/273 (30%), Gaps = 34/273 (12%)

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S +   +  L A    +FC A ++R  +     H  EFT +E      ++E L+    +
Sbjct: 1   ESSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEFTHVEAECPFLTFEDLLNRLED 59

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           ++    +   +   +      NP  +P                        D  +    +
Sbjct: 60  LVCDVVDRVLKSPVASIVYELNPNFKPPKRPFRRMN-------------YSDAIEWLKEH 106

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPR 257
              ++ G      D   +   R++         IN   +L R+P    S      P DPR
Sbjct: 107 DVKKEDGTFYEFGDDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDPR 160

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI---DEDFLACLT 314
            T+  ++   N+             +     E     K++  +        D+       
Sbjct: 161 LTESVDVLMPNVGEIVGGSMR--SWDSEEILEGY---KREGIDPAPYYWYTDQR----KY 211

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 G  +G +R +  +    +I +V   P 
Sbjct: 212 GTCPHGGYGLGLERFLSWILNRYHIRDVCLYPR 244


>gi|148255261|ref|YP_001239846.1| aspartyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166225322|sp|A5EIE6|SYD_BRASB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|146407434|gb|ABQ35940.1| aspartyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 590

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 58/187 (31%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R  I  S+R    E  F E  +  L   SP      R F     I    
Sbjct: 134 RREKLHQNIMTRGAIIDSMRRRMKEQGFFEFQTPILTASSPEG---ARDFLVPSRIH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                   +  A E     +F               I  AEA  +Y   D     +  + 
Sbjct: 245 ----EQEDVFAAMEPVITGVFEDFAKGKPVTKGWPRIPFAEALRKY-GTDKPDLRNPIEM 299

Query: 192 PDRHLLY 198
            D    +
Sbjct: 300 QDVSEHF 306



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 44/149 (29%), Gaps = 9/149 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I    + E  E +  ++        P                  +
Sbjct: 416 EELNLIDKDRFALAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGLEALQTKDPLTIKAFQ 475

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQ 318
           +++     E+ +       P      FE         Y E   +D             P 
Sbjct: 476 YDIACNGYEIASGGIRNHKPEAMVKAFEI------AGYGEQEVVDRFGGMYRAFQYGAPP 529

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             G+A G DR+VML+ G  N+ E+   P 
Sbjct: 530 HGGMAAGVDRIVMLLCGTTNLREISLFPM 558


>gi|213852485|ref|ZP_03382017.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 80

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E        L  L    P  +G+A G DRL ML+TG +NI +VI  P
Sbjct: 7   EEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFP 54


>gi|149197385|ref|ZP_01874436.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149139403|gb|EDM27805.1| aspartyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 596

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 59/180 (32%), Gaps = 17/180 (9%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +      R    ++ R  I +SLR+      F E  +  L   SP      R F   
Sbjct: 127 EHRYLDLRTSRMHHNIITRAKIIASLRQRMTGLGFNEFQTPILTASSPEG---ARDFLVP 183

Query: 66  LIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWY 123
             +        Y L  +P+   + L+ +G +K F  A  +R+ +      P EF  L+  
Sbjct: 184 SRLN---PGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDME 240

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + + + K    +I           F           E   I   E+  +Y +    
Sbjct: 241 MSFATQDDVFKVIEEVIIG--------TFQEFTPWTTDEKEFVRIPYKESMLKYGSDKPD 292



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 52/163 (31%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
            +     Q+  +    +  +  I    + E  +    +         P  E         
Sbjct: 409 AVRDELGQRLNLLDEKEFKFCWIVDYPMFEYNDETKKVEFSHNPFSMPQGEMEALETMDP 468

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 +++L    IEL +       P      F          Y     ++  F   + 
Sbjct: 469 LDVLAWQYDLVCNGIELSSGAVRNHRPDIMLKAFGI------AGY-AAEEVESSFSGMIN 521

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P  +GIA G DR+VML+ G  +I E+I  P + S Q+
Sbjct: 522 AFRHGAPPHAGIAPGVDRMVMLILGEPSIREIIAFPLNGSAQD 564


>gi|49475729|ref|YP_033770.1| aspartyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|62287557|sp|Q6G330|SYD_BARHE RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|49238536|emb|CAF27772.1| Aspartyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 596

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 64/196 (32%), Gaps = 29/196 (14%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  +    ++R  I +++R    EN F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETMHRNIMRRTEIIAAIRRSMQENGFTEFTTPLL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     I     K   L  +P+   + L+ +G ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRIH--QGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +              +    E   + +F               
Sbjct: 225 PRADRLPGEFYQLDVEMSFV--------EQEDVLVTMEPIMRSLFEEFADGKPVTQSFPR 276

Query: 168 ITVAEAFARYANIDLG 183
           ++  EA  +Y +    
Sbjct: 277 LSYEEAMRKYGSDKPD 292



 Score = 76.6 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 44/153 (28%), Gaps = 17/153 (11%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +      + + I      E  E    ++        P                  +
Sbjct: 420 EELDLVDRDCFSLAWIVDFPFFEWNEEEKKLDFAHNPFSMPQGGKDALECQDPLTLKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-T 314
           ++L     E+ +       P      F      ++ ++++                    
Sbjct: 480 YDLVCNGYEIASGGIRNHSPEMMLKVFNLAGLSKEVVEDRFGG----------LYRAFHY 529

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             P   G+A G DR++ML+ G  N+ EV   P 
Sbjct: 530 GAPPHGGMAAGVDRIIMLLQGVKNLREVALFPM 562


>gi|254693499|ref|ZP_05155327.1| aspartyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261213757|ref|ZP_05928038.1| aspartyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260915364|gb|EEX82225.1| aspartyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 595

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 75/224 (33%), Gaps = 24/224 (10%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L K    R  I +++R    E  F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRIH---PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P EF  L+   +  + E++ +    ++R   E   +     +      + +  
Sbjct: 224 DPRADRLPGEFYQLDLEMSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAI 283

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYL-QAQQAGIRVA 209
               ++       I++    D+       +     A  A + V 
Sbjct: 284 RTYGSDKPDLRNPIEMQAVTDHFAGSGFKVFANMIANDAKVEVW 327



 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 48/150 (32%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E N  I+        P                  +
Sbjct: 420 EELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSLPQGGMDALENMDPLEIKAYQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P       E  ++  +K+      ++E F           P
Sbjct: 480 YDLVCNGFEIASGSIRNQLP-------EVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR++ML+ GA N+ E+   P 
Sbjct: 533 PHGGMAAGIDRVIMLLVGAKNLREISVFPM 562


>gi|225558824|gb|EEH07107.1| aspartyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 578

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 22/139 (15%)

Query: 227 EPNLGINCCTILDRYPAPESALANI-----YPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P       +                ++L    +EL      +   
Sbjct: 424 EPGQGGAAGIASTHHPFTAPLRKSDVSLLLTDPTKVIADHYDLVVNGVELGGGSRRIHSA 483

Query: 282 IEQRHRFEKEMQEKKKIYNETYPID-----EDFLACL-TEMPQSSGIAMGFDRLVMLVTG 335
             Q       ++          P D        L  L    P  +GIA+GFDRLV ++ G
Sbjct: 484 AVQEFILRDILK---------MPADRLADFSHLLEALRAGCPPHAGIALGFDRLVAVMLG 534

Query: 336 ANNINEVIWTPFSQSNQEE 354
             ++ +VI  P  +S + E
Sbjct: 535 KESLRDVIAFP--KSGKGE 551



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 17/182 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKP 75
           R  LL R   ++ LRE   E Q  F+EI++  L + +P      R F      +      
Sbjct: 108 RDALLFRARARNVLREVLEECQLPFVEIETPLLFKSTPEG---AREFLVPTRRR---GMA 161

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+A+G  + + FA  +R+ +     QPEFT L+   +  +       
Sbjct: 162 YALPQSPQQYKQILMASGIPRYYQFARCFRDEDLRADRQPEFTQLDLEMSFAT------- 214

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +    E A ++++S       P      ++  +A A+Y +      +    +   H
Sbjct: 215 -GEDVMAIIEAAVKRLWSSLMSEPLPSGSFPRLSYGDAMAKYGSDKPDVRIGMEIKRIEH 273

Query: 196 LL 197
           ++
Sbjct: 274 MI 275


>gi|302326888|gb|ADL26089.1| aspartate--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 623

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 28/200 (14%)

Query: 13  DFHYRRRPFLLKR----------NMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIR 60
           D   + R   L+R          +    ++ ++F  N F  I++  L + +P     ++ 
Sbjct: 152 DLRLQYRYLDLRRPWIQKKLLLKSRFLKAVYDFFYSNGFENIETPCLCKSTPEGARDYLV 211

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      + +      SP+   + L+ AG ++ F  A  +R+ +     QPEFT +
Sbjct: 212 PSRVNPGKFYALPQ------SPQQYKQLLMIAGMDRYFQIAKCFRDEDLRADRQPEFTQI 265

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  + +++M+     +                 N  P      +  AEA  +Y   
Sbjct: 266 DVEMSFVNQDEVMEMFDKFVTEVLGKV---------WNFEPPRHIRRMKWAEAMLKY-GS 315

Query: 181 DLGTTLDNPDQPDRHLLYLQ 200
           D      + +  D   +  +
Sbjct: 316 DKPDLRFDLEIHDVSEIGAK 335



 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 52/178 (29%), Gaps = 22/178 (12%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D+   +  P++     +     +        D     F  I    +          +   
Sbjct: 419 DMMFFIAGPEKIAATAMGQLRLEVARIKGLRDPKKREFVWITEFPMFEYSDTEGRYMAMH 478

Query: 241 YP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF------E 289
           +P          +           + ++L    +E+      + +P  Q   F      E
Sbjct: 479 HPFTNPLPEHLDMMLGGNLKDCNAEAYDLVLNGVEIGGGSIRIHNPEVQEKVFRLLGLSE 538

Query: 290 KEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           ++++ K             F+       P   G+A G DR+V  + G  +I + I  P
Sbjct: 539 EQVKTKFG----------FFVDAFKYGAPPHGGLAFGLDRVVATMEGEESIRDYIAFP 586


>gi|254701528|ref|ZP_05163356.1| aspartyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261752076|ref|ZP_05995785.1| aspartyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261741829|gb|EEY29755.1| aspartyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 595

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 75/224 (33%), Gaps = 24/224 (10%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L K    R  I +++R    E  F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRIH---PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P EF  L+   +  + E++ +    ++R   E   +     +      + +  
Sbjct: 224 DPRADRLPGEFYQLDLEMSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAI 283

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYL-QAQQAGIRVA 209
               ++       I++    D+       +     A  A + V 
Sbjct: 284 RTYGSDKPDLRNPIEMQAVTDHFAGSGFKVFANMIANDAKVEVW 327



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 48/150 (32%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E N  I+        P                  +
Sbjct: 420 EELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSMPQGGMDALENMDPLEIKAYQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P       E  ++  +K+      ++E F           P
Sbjct: 480 YDLVCNGFEIASGSIRNQLP-------EVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR++ML+ GA N+ E+   P 
Sbjct: 533 PHGGMAAGIDRVIMLLVGAKNLREISLFPM 562


>gi|302495859|ref|XP_003009943.1| hypothetical protein ARB_03869 [Arthroderma benhamiae CBS 112371]
 gi|291173465|gb|EFE29298.1| hypothetical protein ARB_03869 [Arthroderma benhamiae CBS 112371]
          Length = 539

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 91/290 (31%), Gaps = 38/290 (13%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHIRKPLYLQ 79
            L  R  +  + R+ F + Q +E+   ++  +     + +  F       D+  +  YL 
Sbjct: 276 VLKVRAAVVRAFRKMFEQKQMLEVTPPAMVQTQVEGGSTLFEF-------DYYGEKAYLT 328

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
            S +   +  L A    +FC   ++R  +     H  E+T +E      ++  L+     
Sbjct: 329 QSSQLYLETCL-ASLGDVFCICPSFRAEKSLTRRHLSEYTHIESELDFITFNDLLDHIEE 387

Query: 139 IIRCAAEVANQKIFSFQNVNC--NPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           II    +++         V      F+ P    +   ++                    +
Sbjct: 388 IICSVIDISLADPQIAAFVKQLNPNFTPPARPFMRMRYSE------------------AI 429

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP-AD 255
            +L             ++ D  +     K+     IN   +L  +PA   A        D
Sbjct: 430 EWLNEHGINNEEDKPHSFGDDIAEAAERKM--TDIINKPILLTHFPAEIKAFYMKKDAED 487

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           PR T+  ++    +         +D  +     E     KK+  + T   
Sbjct: 488 PRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMGAYKKEGMDPTPYY 532


>gi|62289704|ref|YP_221497.1| aspartyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699634|ref|YP_414208.1| aspartyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189023954|ref|YP_001934722.1| aspartyl-tRNA synthetase [Brucella abortus S19]
 gi|237815193|ref|ZP_04594191.1| aspartyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254689016|ref|ZP_05152270.1| aspartyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254697151|ref|ZP_05158979.1| aspartyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730047|ref|ZP_05188625.1| aspartyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256257266|ref|ZP_05462802.1| aspartyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260545540|ref|ZP_05821281.1| aspartyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260754509|ref|ZP_05866857.1| aspartyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260757730|ref|ZP_05870078.1| aspartyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761555|ref|ZP_05873898.1| aspartyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883538|ref|ZP_05895152.1| aspartyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297248111|ref|ZP_06931829.1| aspartyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|81309434|sp|Q57DZ8|SYD_BRUAB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|97196557|sp|Q2YNA7|SYD_BRUA2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|238689357|sp|B2S501|SYD_BRUA1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|62195836|gb|AAX74136.1| AspS, aspartyl-tRNA synthase [Brucella abortus bv. 1 str. 9-941]
 gi|82615735|emb|CAJ10731.1| Aspartyl-tRNA synthetase, class IIb:GAD domain:tRNA synthetase,
           class II (D, K and N):OB-fold nucleic acid binding
           domain:Asp [Brucella melitensis biovar Abortus 2308]
 gi|189019526|gb|ACD72248.1| aspartyl-tRNA synthetase [Brucella abortus S19]
 gi|237790030|gb|EEP64240.1| aspartyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260096947|gb|EEW80822.1| aspartyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260668048|gb|EEX54988.1| aspartyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260671987|gb|EEX58808.1| aspartyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674617|gb|EEX61438.1| aspartyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873066|gb|EEX80135.1| aspartyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297175280|gb|EFH34627.1| aspartyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 595

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 75/224 (33%), Gaps = 24/224 (10%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L K    R  I +++R    E  F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRIH---PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P EF  L+   +  + E++ +    ++R   E   +     +      + +  
Sbjct: 224 DPRADRLPGEFYQLDLEMSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAI 283

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYL-QAQQAGIRVA 209
               ++       I++    D+       +     A  A + V 
Sbjct: 284 RTYGSDKPDLRNPIEMQAVTDHFAGSGFKVFANMIANDAKVEVW 327



 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 48/150 (32%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E N  I+        P                  +
Sbjct: 420 EELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSLPQGGMDALENMDPLEIKAYQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P       E  ++  +K+      ++E F           P
Sbjct: 480 YDLVCNGFEIASGSIRNQLP-------EVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR++ML+ GA N+ E+   P 
Sbjct: 533 PHGGMAAGIDRVIMLLVGAKNLREISLFPM 562


>gi|27379254|ref|NP_770783.1| aspartyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|46577252|sp|Q89MP9|SYD_BRAJA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|27352405|dbj|BAC49408.1| aspartyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 590

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 66/204 (32%), Gaps = 7/204 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R  I  S+R       F E ++  L   SP      R F     I    
Sbjct: 134 RREKLHQNIMTRVEIIKSMRRRMEGQGFFEFNTPILTASSPEG---ARDFLVPSRIH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +  + E 
Sbjct: 189 GKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVEMSFVTQED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    E   +     +N    PF+E      ++       I++    ++   
Sbjct: 249 VFAAMEPVITGVFEEFAKGKPVSKNWRRIPFAEALRKYGSDKPDLRNPIEMQEVSEHFRG 308

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWS 215
               +     +    +V       
Sbjct: 309 SGFKVFARMLEDPKNQVWAIPAPG 332



 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 44/149 (29%), Gaps = 9/149 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I    + E  E +  ++        P                  +
Sbjct: 416 EELNLTDKERFELAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGLEALKGQDPLTIKAFQ 475

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQ 318
           +++     E+ +       P      FE         Y E   +D             P 
Sbjct: 476 YDITCNGYEIASGGIRNHVPEAMVKAFEI------AGYGEQEVVDRFGGMYRAFQYGAPP 529

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             G+A G DR+VML+ G  N+ E+   P 
Sbjct: 530 HGGMAAGVDRIVMLLCGTTNLREISLFPM 558


>gi|321454344|gb|EFX65518.1| hypothetical protein DAPPUDRAFT_264578 [Daphnia pulex]
          Length = 572

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 8/87 (9%)

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQS 319
            ++L     E+      +     Q    ++ +QE     +         L  L+   P  
Sbjct: 461 HYDLVLNGSEIGGGSIRIHQSDVQELVLKEILQE-----DPANL--HHLLKALSCGAPPH 513

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTP 346
            GIA+G DRL+ ++    +I +VI  P
Sbjct: 514 GGIALGLDRLMSIICDTKSIRDVIAFP 540



 Score = 75.8 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 22/177 (12%)

Query: 27  MIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
            +   +R     + F++I++ +L + +PG       F               L  SP+  
Sbjct: 93  KLLKIVRH----HGFVDIETPTLFRRTPGGAQE---FVVPTRTSGKF---YSLVQSPQQF 142

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            + L+  G ++ F  A  +R+       QPEFT ++   +  + E + +    ++     
Sbjct: 143 KQLLMIGGFDRYFQIARCYRDEGTKPNRQPEFTQVDIEMSFTTKENIQRLIEGLLNH--- 199

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
                   +             +T  +A   Y  +D   T  +    D   L   ++
Sbjct: 200 -------VWPEDMGRIPIPFPEMTYKDAMKNY-GVDKPDTRFDVLLQDVTELAKASE 248


>gi|293115523|ref|ZP_05791905.2| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809569|gb|EFF68774.1| aspartate--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 594

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 61/200 (30%), Gaps = 16/200 (8%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ---QAGIRVAHDDTWSDIFSR 220
           +     + E F   A +  G T+      +    +   Q   + G ++   +  +  F  
Sbjct: 378 KFIPDELKEEFKTIAGLSTGDTIFFMADKEERAAFFAGQIRTELGTKLDLIEKNAYRFCY 437

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESA----LANIYPADPRFTKRFELYACNIELCNACD 276
           +    +               P           N          ++++    +EL +   
Sbjct: 438 VNDFPMFEKDPETKKIGFTHNPFSMPQGGLEALNTKDPLDILAYQYDIVCNGVELSSGAV 497

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACLT-EMPQSSGIAMGFDRLVMLV 333
              D       FE         Y+E     +            P  +G+A G DR++ML+
Sbjct: 498 RNHDMQIMVKAFEI------AGYDEEVLKAKFGALYNAFQFGAPPHAGMAPGVDRMIMLL 551

Query: 334 TGANNINEVIWTPFSQSNQE 353
               NI EVI  P S + Q+
Sbjct: 552 RNEENIREVIAFPMSGTAQD 571



 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + + +  +L R+ + + LR+   E  F+EI +  L   SP      R +        + 
Sbjct: 145 RNEKVKDNILFRSKVIAYLRQKMTEMGFVEIQTPILCASSPEG---ARDYIVPSR--RYK 199

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G +K F  A  +R+ +      P EF  L++  +  + E 
Sbjct: 200 GKFYALPQAPQQYKQLLMVSGIDKYFQIAPCFRDEDARADRSPGEFYQLDFEMSFATQED 259

Query: 132 LMKDCMNII 140
           + K    ++
Sbjct: 260 VFKIGEEVL 268


>gi|192291824|ref|YP_001992429.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|238692580|sp|B3Q9Q1|SYD_RHOPT RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|192285573|gb|ACF01954.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 591

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 62/198 (31%), Gaps = 26/198 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   R R            ++ R  I  S+R    E  F E  +  L   SP      R 
Sbjct: 123 DVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEG---ARD 179

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTML 120
           F     I     K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L
Sbjct: 180 FLVPSRIH--PGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQL 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  +         + I  A E     +F               I  A++  +Y   
Sbjct: 238 DVEMSFVT--------QDDIFAAMEPVITGVFEEFAKGKRVTKGWPRIAFADSMRKY-GT 288

Query: 181 DLGTTLDNPDQPDRHLLY 198
           D     +  +  D    +
Sbjct: 289 DKPDLRNPIEMQDVSEHF 306



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + +    + E  E +  ++        P                  +
Sbjct: 416 EELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALTSQDPLTIKAFQ 475

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQ 318
           +++     E+ +       P      FE         Y E   +D             P 
Sbjct: 476 YDITCNGYEIASGGIRNHRPEAMVKAFEI------AGYGEQEVVDRFGGMYRAFQYGAPP 529

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G+A G DR+VML+ G  N+ E+   P +Q  ++
Sbjct: 530 HGGMAAGVDRIVMLLCGTTNLREISLFPMNQRAED 564


>gi|39936106|ref|NP_948382.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|62287570|sp|Q6N5D6|SYD_RHOPA RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|39649960|emb|CAE28484.1| aspartate-tRNA ligase [Rhodopseudomonas palustris CGA009]
          Length = 591

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 62/198 (31%), Gaps = 26/198 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   R R            ++ R  I  S+R    E  F E  +  L   SP      R 
Sbjct: 123 DVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEG---ARD 179

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTML 120
           F     I     K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L
Sbjct: 180 FLVPSRIH--PGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQL 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  +         + I  A E     +F               I  A++  +Y   
Sbjct: 238 DVEMSFVT--------QDDIFAAMEPVITGVFEEFAKGKRVTKGWPRIAFADSMRKY-GT 288

Query: 181 DLGTTLDNPDQPDRHLLY 198
           D     +  +  D    +
Sbjct: 289 DKPDLRNPIEMQDVSEHF 306



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + +    + E  E +  ++        P                  +
Sbjct: 416 EELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALTSQDPLTIKAFQ 475

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQ 318
           +++     E+ +       P      FE         Y E   +D             P 
Sbjct: 476 YDITCNGYEIASGGIRNHRPEAMVKAFEI------AGYGEQEVVDRFGGMYRAFQYGAPP 529

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G+A G DR+VML+ G  N+ E+   P +Q  ++
Sbjct: 530 HGGMAAGVDRIVMLLCGTTNLREISLFPMNQRAED 564


>gi|328781302|ref|XP_001121020.2| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Apis
           mellifera]
          Length = 581

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 9/146 (6%)

Query: 22  LLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY ++   F++I++ +L + +P        F           +   L 
Sbjct: 141 LRLRSKVVMKMREYLIKQCNFVDIETPTLFKNTPEGAQE---FIVPTKFP---GQFYSLV 194

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +RN +     Q EFT L+   +    E +MK   N+
Sbjct: 195 QSPQQFKQLLMVGGFDRYFQLARCYRNEQPRHDRQLEFTQLDIEMSFVDCEGIMKLIENL 254

Query: 140 IRC-AAEVANQKIFSFQNVNCNPFSE 164
           +     E +++    F+ +  +   E
Sbjct: 255 LVYSWPEESHELTIPFKCMKYDNAME 280



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 50/157 (31%), Gaps = 10/157 (6%)

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPR 257
           +L+ +   IR   D+    I    L         +         P  +     +      
Sbjct: 410 FLENKGEKIRTIKDELLW-ITDFPLFSFNTKTNLLETMHHPFTQPHSDDVELLVKNPLKV 468

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EM 316
               ++L     E+      +     Q+     ++    KI   +       L  L    
Sbjct: 469 RGLHYDLVMNGFEIAGGSIRIHKSKLQK-----QILRMLKINESSLM---HLLDALESGA 520

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   GIA+G DRL+ L+    NI  VI  P + S ++
Sbjct: 521 PPHGGIAIGLDRLISLLCNEQNIKNVIAFPKTMSGRD 557


>gi|317497925|ref|ZP_07956234.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|291560551|emb|CBL39351.1| aspartyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
 gi|316894804|gb|EFV16977.1| aspartyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 581

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 8/135 (5%)

Query: 13  DFHYRR-RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQD 70
           D   R+ +  +L R+ +   LRE   +  F+E+ +  L   SP      R +        
Sbjct: 130 DMRNRKVKDNILFRSKVIRFLREKMEDMGFVEVQTPILCASSPEG---ARDYVVPSRK-- 184

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESY 129
           +  K   L  +P+   + L+ +G +K +  A  +R+ +      P EF  L++  A  + 
Sbjct: 185 YKGKFYALPQAPQQYKQLLMVSGIDKYYQIAPCFRDEDARADRSPGEFYQLDFEMAFATQ 244

Query: 130 EQLMKDCMNIIRCAA 144
           E + K    ++    
Sbjct: 245 EDVFKIGEEVLTETF 259



 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 16/200 (8%)

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ---QAGIRVAHDDTWSDIFSR 220
           +     +    A  A +  G T+     P++       Q   + G R+   +  +  F  
Sbjct: 365 KFIPDDMKMELAEMAGLQEGDTIFFIAAPEKAACIYAGQIRNELGSRLDLLEKDAYRFCY 424

Query: 221 ILIEKIEPNLGINCCTILDRYPAPESA--LANIYPADPRF--TKRFELYACNIELCNACD 276
           I    +               P       L  +   DP      ++++    +EL +   
Sbjct: 425 INDFPMYEIDEETGKLGFTHNPFSMPQGGLEALNEKDPLDILAYQYDIVCNGVELSSGAV 484

Query: 277 ELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACLT-EMPQSSGIAMGFDRLVMLV 333
              D       F+         Y++    D+            P  +G+A G DR++ML+
Sbjct: 485 RNHDMEIMEKAFDI------AGYDKETLKDKFGALYNAFQFGAPPHAGMAPGVDRMIMLL 538

Query: 334 TGANNINEVIWTPFSQSNQE 353
               NI E+I  P S + Q+
Sbjct: 539 RNEENIREIIAFPMSGTAQD 558


>gi|119384915|ref|YP_915971.1| aspartyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|166225372|sp|A1B431|SYD_PARDP RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|119374682|gb|ABL70275.1| aspartyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 591

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 11/197 (5%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R+ +   LR+   +  F E  +  +   SP      R F     +    
Sbjct: 134 RRESLHNNIMLRSRVVKWLRDAMWDQGFTEFQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ AG +K F  A  +R+ +      P +F  L+   +    E 
Sbjct: 189 GKFYALPQAPQQFKQLIMVAGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVEQED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +I+   E          +    P++E      ++       I++    D+   
Sbjct: 249 VFRAIQPVIQGLFEEFGGGRRVDTDWPRIPYAEAMLKYGSDKPDLRNPIEMQVVSDHFRG 308

Query: 192 PDRHLLYLQAQQAGIRV 208
               +     +Q G  V
Sbjct: 309 SGFAIFAKLLEQDGTEV 325



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 5/96 (5%)

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
             +       CN   EL+    + HR E   +  +        +++ F   +       P
Sbjct: 472 AVMGYQYDLACNGY-ELVSGAIRNHRPEIMFRAFELAGYGRDEVEKRFGGMVKAFRYGAP 530

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 531 PHGGCAAGIDRIVMLLADEVNIREVIMFPMNQRAED 566


>gi|17987485|ref|NP_540119.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|23501638|ref|NP_697765.1| aspartyl-tRNA synthetase [Brucella suis 1330]
 gi|148560265|ref|YP_001258732.1| aspartyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|161618720|ref|YP_001592607.1| aspartyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163843023|ref|YP_001627427.1| aspartyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225627252|ref|ZP_03785289.1| aspartyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225852268|ref|YP_002732501.1| aspartyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|254704077|ref|ZP_05165905.1| aspartyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|254707022|ref|ZP_05168850.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254709869|ref|ZP_05171680.1| aspartyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254713870|ref|ZP_05175681.1| aspartyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254717073|ref|ZP_05178884.1| aspartyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031361|ref|ZP_05444975.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256044441|ref|ZP_05447345.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256060871|ref|ZP_05451031.1| aspartyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|256113285|ref|ZP_05454153.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256159483|ref|ZP_05457251.1| aspartyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254769|ref|ZP_05460305.1| aspartyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256264224|ref|ZP_05466756.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|260168495|ref|ZP_05755306.1| aspartyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260563792|ref|ZP_05834278.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260566675|ref|ZP_05837145.1| aspartyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261218884|ref|ZP_05933165.1| aspartyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261221948|ref|ZP_05936229.1| aspartyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261314490|ref|ZP_05953687.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317410|ref|ZP_05956607.1| aspartyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321617|ref|ZP_05960814.1| aspartyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261324868|ref|ZP_05964065.1| aspartyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261754735|ref|ZP_05998444.1| aspartyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261757963|ref|ZP_06001672.1| aspartyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988447|ref|ZP_06101004.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265990861|ref|ZP_06103418.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994697|ref|ZP_06107254.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265997911|ref|ZP_06110468.1| aspartyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|294852116|ref|ZP_06792789.1| aspartyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|54039650|sp|P67013|SYD_BRUSU RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|54042025|sp|P67012|SYD_BRUME RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225324|sp|A5VPT5|SYD_BRUO2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082087|sp|A9MAD3|SYD_BRUC2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|189082088|sp|B0CL77|SYD_BRUSI RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|254781720|sp|C0RI89|SYD_BRUMB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|17983182|gb|AAL52383.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|23347556|gb|AAN29680.1| aspartyl-tRNA synthetase [Brucella suis 1330]
 gi|148371522|gb|ABQ61501.1| aspartyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|161335531|gb|ABX61836.1| aspartyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|163673746|gb|ABY37857.1| aspartyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|225617257|gb|EEH14302.1| aspartyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|225640633|gb|ACO00547.1| aspartyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|260153808|gb|EEW88900.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260156193|gb|EEW91273.1| aspartyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260920532|gb|EEX87185.1| aspartyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260923973|gb|EEX90541.1| aspartyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294307|gb|EEX97803.1| aspartyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296633|gb|EEY00130.1| aspartyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261300848|gb|EEY04345.1| aspartyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261303516|gb|EEY07013.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261737947|gb|EEY25943.1| aspartyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261744488|gb|EEY32414.1| aspartyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|262552379|gb|EEZ08369.1| aspartyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|262765810|gb|EEZ11599.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263001645|gb|EEZ14220.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094470|gb|EEZ18292.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|264660644|gb|EEZ30905.1| aspartyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|294820705|gb|EFG37704.1| aspartyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|326408774|gb|ADZ65839.1| aspartyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538492|gb|ADZ86707.1| aspartyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 595

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 75/223 (33%), Gaps = 22/223 (9%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L K    R  I +++R    E  F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     I     K   L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRIH--PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E++ +    ++R   E   +     +      + +   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIR 284

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL-QAQQAGIRVA 209
              ++       I++    D+       +     A  A + V 
Sbjct: 285 TYGSDKPDLRNPIEMQAVTDHFAGSGFKVFANMIANDAKVEVW 327



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 48/150 (32%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E N  I+        P                  +
Sbjct: 420 EELNLVDRDRFELAWIIDFPFYEWDEDNKKIDFAHNPFSMPQGGMDALENMDPLEIKAYQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P       E  ++  +K+      ++E F           P
Sbjct: 480 YDLVCNGFEIASGSIRNQLP-------EVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR++ML+ GA N+ E+   P 
Sbjct: 533 PHGGMAAGIDRVIMLLVGAKNLREISLFPM 562


>gi|319898852|ref|YP_004158945.1| Aspartyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402816|emb|CBI76367.1| Aspartyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 596

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 65/196 (33%), Gaps = 29/196 (14%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  +    ++R  I +S+R +  +  F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETMHKNIMRRTEIIASIRRHMQDCAFTEFTTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     I     K   L  +P+   + L+ +G ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRIH--QGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +              I    E   + IF       +       
Sbjct: 225 PRADRLPGEFYQLDIEMSFV--------EQEDIFATMEPIMRSIFEEFADGKSVTQNFPR 276

Query: 168 ITVAEAFARYANIDLG 183
           I+  EA  +Y +    
Sbjct: 277 ISYDEAMQKYGSDKPD 292



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 46/153 (30%), Gaps = 17/153 (11%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +      +++ I      E  E    ++        P       +          +
Sbjct: 420 EELDLIDRGCFSFAWIVDFPFFEWNEDEKKLDFAHNPFSMPQGGKDALDSEDPLSLKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL-T 314
           ++L     E+ +       P      F      ++ ++E+                    
Sbjct: 480 YDLVCNGYEIASGGIRNHSPEMMLKIFNIAGLSKEVVEERFGG----------LYRAFHY 529

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             P   G+A G DR+VML+ G  N+ EV   P 
Sbjct: 530 GAPPHGGMAAGVDRIVMLLQGVKNLREVSLFPM 562


>gi|194674189|ref|XP_001789065.1| PREDICTED: aspartyl-tRNA synthetase, mitochondrial-like [Bos
           taurus]
          Length = 456

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 8/126 (6%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F+++++ +L + +PG     + F               L 
Sbjct: 184 LRLRSQMVMKMREYLCNLHGFVDVETPTLFKRTPGGA---KEFVIPSREPGKF---YSLP 237

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+      +  G ++ F  A  +R+       QPEFT ++   +      +      +
Sbjct: 238 QSPQQFKPPHMLGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQTGVQSLIEGL 297

Query: 140 IRCAAE 145
           ++ +  
Sbjct: 298 LQYSWP 303


>gi|114673287|ref|XP_001139091.1| PREDICTED: asparaginyl-tRNA synthetase isoform 3 [Pan troglodytes]
          Length = 510

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 84/251 (33%), Gaps = 32/251 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+M+    R++F +  + E+   +L      G  T        L   D+  +  +L
Sbjct: 245 ILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 296

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  L A    +FC A ++R  +     H  E+T +E      +++ L+    
Sbjct: 297 TQSSQLYLETCLPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLE 355

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           +++    +   +          NP  +P        F R    D    L   D       
Sbjct: 356 DLVCDVVDRILKSPAGSIVHELNPNFQPPKRP----FKRMNYSDAIVWLKEHDVK----- 406

Query: 198 YLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADP 256
               ++ G      +   +   R++         IN   +L R+P    S      P D 
Sbjct: 407 ----KEDGTFYEFGEDIPEAPERLM------TDTINEPILLCRFPVEIKSFYMQRCPEDS 456

Query: 257 RFTKRFELYAC 267
           R T+  ++   
Sbjct: 457 RLTESVDVLMP 467


>gi|119720046|ref|YP_920541.1| asparagine synthetase A [Thermofilum pendens Hrk 5]
 gi|119525166|gb|ABL78538.1| aspartate-ammonia ligase [Thermofilum pendens Hrk 5]
          Length = 364

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/338 (12%), Positives = 84/338 (24%), Gaps = 48/338 (14%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP-GNETHIRAFSTE 65
              W R+  Y        +  I  ++REY   + F E     +           +  + +
Sbjct: 48  SWKWARESKYA--TVFRIQASILRAIREYLDSHGFTEALPPIIGPVTDPGIRGAKQVTVD 105

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC----LHQPEFTMLE 121
               +      Y   S     K+ +AA   K++  +   R           H  EF  ++
Sbjct: 106 FYGHE------YKVMSSAILYKQYMAAVLGKVYFVSPNIRLEPNDSIFTGRHLVEFFQVD 159

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
                 + E  M     +    A    +   +          E          A    + 
Sbjct: 160 IEILDGTLEDAMSLAEGLFMHVARYVEEVHGADLEKLGRTLPEYRTPFARYTHAEAVELV 219

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
                 NP   +                           +   +   +        +  Y
Sbjct: 220 NRLGCRNPRNTEI--------------------------LWECEKVLSAHHTSPLFIYGY 253

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR-HRFEKEMQEKKKIYN 300
           P    +       DP        +   +       E +   E+     +   + K+   +
Sbjct: 254 PK--GSRGFYNREDPERPGYLRDFD--MLYPEGFGEAISGGEREYEPAKVIARIKESGED 309

Query: 301 ETYPIDEDFLACLTEMPQ--SSGIAMGFDRLVMLVTGA 336
                 + FL  L +     ++G  +G +RL   + G 
Sbjct: 310 PKKY--KWFLEMLRDFYPLKTAGFGIGVERLTRYICGL 345


>gi|304391963|ref|ZP_07373905.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303296192|gb|EFL90550.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 594

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 67/216 (31%), Gaps = 25/216 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    +KR  + S +R       F E  +  L   SP      R F     I    
Sbjct: 134 RRETLHANIMKRQAVISDMRSRMETAGFFEFQTPILTASSPEG---ARDFLVPSRIH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ +G ++ F  A  +R+ +      P EF  L+   +     
Sbjct: 188 PGNFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLEMSFV--- 244

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                    +    E    ++F               I   EA  +Y         D  +
Sbjct: 245 -----EQEDVLTTMEPVITEVFEQFADGKTVTKNWPRIPYREAIRKYG----SDKPDLRN 295

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
             +   +    + +G +V      +D  + +    +
Sbjct: 296 PIEMQNVSEHFRGSGFKVFAGILDADDNNEVWAIPV 331



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 51/166 (30%), Gaps = 17/166 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                 A++AG+   +      I      E  E N  +         P       N    
Sbjct: 413 DARTKAAEEAGLINENAFELCWIVDFPFYEWDEENKKVEFGHNPFSMPKGGIDALNNEDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDED 308
                 ++++     E+ +       P      F      + +++E+             
Sbjct: 473 LKIDAMQYDMVCNGFEIASGGIRNHLPETMVKAFGITGLSQADVEERFGG---------- 522

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                    P   G+A G DR+VML+ G  N+ E+   P +Q  ++
Sbjct: 523 LYRAFQYGAPPHGGMAAGVDRIVMLICGTKNLREITMFPMNQQAKD 568


>gi|159045173|ref|YP_001533967.1| aspartyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189082096|sp|A8LI32|SYD_DINSH RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|157912933|gb|ABV94366.1| aspartyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 590

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 69/221 (31%), Gaps = 21/221 (9%)

Query: 4   IPSQPWWNRD----FHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +++       + R            ++ R+ +  S+R+   +  F E  +  +
Sbjct: 110 LPLPVFGDQEYPEETRLKYRFLDLRRESLHDNIMLRSKVVQSIRKRMWDIDFTEFQTPII 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     +     K   L  +P+   + ++  G +K F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRLH--PGKFYALPQAPQQFKQLIMVGGFDKYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P +F  L+   +  S + +      +I    E          +     + +   
Sbjct: 225 PRADRSPTDFYQLDLEMSFVSQQDVFDTIQPVIAGIFEEFGGGRRVDTDWPLISYRDSAL 284

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
               +       I +    D+       +     +Q G  +
Sbjct: 285 WYGTDKPDLRNPIKMQIVSDHFAGSGFAIFAKLLEQEGTEI 325



 Score = 76.2 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQS 319
           L       CN   EL+    + H+ +   +  +        +++ F   +       P  
Sbjct: 473 LGYQYDLACNGY-ELVSGAIRNHKLDIMYKAFEIAGYGADEVEKRFGGMVNAFKYGPPPH 531

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 532 GGCAAGIDRIVMLLADTANIREVIMFPMNQRAED 565


>gi|307317752|ref|ZP_07597190.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306896514|gb|EFN27262.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 595

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 71/223 (31%), Gaps = 22/223 (9%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    ++R  I +++R    +  F E  +  L 
Sbjct: 111 PLPVFGEPDYPEDVRLKYRFLDLRRETLHKNIVRRTEIIAAMRRRMGDIGFTEYTTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRIH---PGNFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                 P EF  L+   +    E +      +IR    + A  K  + +       +   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVEQEDVWDAMEPMIRAIFSDFAGGKPVTDKFPRIPYDTAIR 284

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                +   R        T        +    + A    + + 
Sbjct: 285 KYGSDKPDLRNPIEMQEVTEHFAGSGFKVFANMIASNPKVEIW 327



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 49/166 (29%), Gaps = 17/166 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +          I      E  E    ++        P    +  +    
Sbjct: 413 EARTRAGEELNLVDRDRYELCWIVDFPFYEWNEEEKRVDFAHNPFSMPQGGLSALSSDDL 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                 ++++     E+ +       P      FE       +++E+             
Sbjct: 473 LSIKAFQYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEERFGG---------- 522

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                    P   G+A G DR+VML+ GA N+ E+   P +Q  Q+
Sbjct: 523 LYRAFQYGAPPHGGMAFGIDRIVMLLVGAKNLREISLFPMNQQAQD 568


>gi|319404162|emb|CBI77755.1| Aspartyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 596

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 68/196 (34%), Gaps = 29/196 (14%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  +    ++R  I +S+R +  +  F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETMHKNIMRRTEIIASIRRHMQDCAFTEFTTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     I     K   L  +P+   + L+ +G ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRIH--QGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +    E ++     IIR   E         QN           
Sbjct: 225 PRADRLPGEFYQLDIEMSFVEQEDILVTMEPIIRSIFEEFADGKSVTQN--------FPR 276

Query: 168 ITVAEAFARYANIDLG 183
           I+  EA  +Y +    
Sbjct: 277 ISYDEAMQKYGSDKPD 292



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 45/150 (30%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+      +++ I      E  E    ++        P       +          +
Sbjct: 420 EELGLIDRECFSFAWIIDFPFFEWNEDEKKLDFAHNPFSMPQGGKNALDSQDPLSLKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P      F                ++E F           P
Sbjct: 480 YDLVCNGYEIASGGIRNHSPEMMLKVF-------NLAGLSQEVVEERFGGLYRAFHYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR+VML+ G  N+ EV   P 
Sbjct: 533 PHGGMAAGVDRIVMLLQGVKNLREVSLFPM 562


>gi|13541490|ref|NP_111178.1| asparagine synthetase A [Thermoplasma volcanium GSS1]
 gi|14324874|dbj|BAB59800.1| tRNA synthetase Asn [Thermoplasma volcanium GSS1]
          Length = 314

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/340 (15%), Positives = 100/340 (29%), Gaps = 71/340 (20%)

Query: 23  LKRN-MIQSSLREYFVE----NQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLY 77
           L+R   I+SS+R Y  +      FIE+    +      +             D+      
Sbjct: 22  LQRALKIESSVRSYLSDYLKGRGFIEV-PPVIISVL-TDPLNHP--VYDPTIDYYGYKYS 77

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC----LHQPEFTMLEWYRAHESYEQLM 133
           +  S     K +L     KIF F+   R  E+       H  EFT L+      + E +M
Sbjct: 78  ITKSM-IFHKHILTKHFGKIFTFSPNIRLEEEDKAETGRHLSEFTQLDLEIRDATREDVM 136

Query: 134 KDCMNIIRCAAEVANQKIFS----FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
                +I        +        F      P    E I   +A   Y            
Sbjct: 137 SLGEEMIVELFSKIKKTHSDDLKFFGRDLRIPKKPFERIRYKDAEKEYGG---------- 186

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
              D   +  + ++                                  +   P  +    
Sbjct: 187 ---DFESILSKEKK------------------------------EPFWIIDIPLEKREFY 213

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE--KKKIYNETYPIDE 307
                DP+      L   ++       E L   E+ ++ ++ ++   KK+   E +   +
Sbjct: 214 --DREDPQR--PGILVDMDLVYPEGFGEALSGGEREYKLDRIIERIHKKRQTEEQF---K 266

Query: 308 DFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            ++      +  S+G  +G +RL   + G + I +V   P
Sbjct: 267 WYIEFAKDGLYPSAGFGIGIERLTRYICGLSRIEDVHPFP 306


>gi|260432891|ref|ZP_05786862.1| aspartyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416719|gb|EEX09978.1| aspartyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 591

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 72/221 (32%), Gaps = 21/221 (9%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +++        YR    RR  + +    R+ + +S+R    +  F E  +  +
Sbjct: 110 LPLMVFGDQEYPEETRLRYRYLDLRREAMQRNMALRSDVIASMRRRMWDQGFREYQTPII 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     +     K   L  +P+   + ++ +G +K F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRLH--PGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P +F  L+   +  + + +      ++    E         +      + +   
Sbjct: 225 PRADRSPTDFYQLDLEMSFVTQQDVFDTIQPVLTGIFEEFGGGRKVDKVWPQISYKDAAL 284

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
               +       I +    D+       +     +Q G  +
Sbjct: 285 WYGTDKPDLRNPIKMQVVSDHFRGSGFAIFAKLLEQEGTEI 325



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 6/153 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       ++ I    + EK E    I+        P          P + +   +
Sbjct: 419 EELGLTDKDRFAFAWIVDFPIYEKDEETGEIDFEHNPFSMPQGGMEALQGDPLEVKG-YQ 477

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           ++L     EL +       P      FE          +E                P   
Sbjct: 478 YDLACNGYELVSGAIRNHKPEIMLKAFE----LAGYGEDEVKSRFGALFNAFHYGAPPHG 533

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G A G DR+VML+    NI EV+  P +Q  ++
Sbjct: 534 GCAAGIDRIVMLLADEANIREVMMFPMNQRAED 566


>gi|15964947|ref|NP_385300.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307301018|ref|ZP_07580787.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|24212413|sp|Q92QV4|SYD_RHIME RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|15074126|emb|CAC45773.1| Probable aspartyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306903973|gb|EFN34559.1| aspartyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 595

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 71/223 (31%), Gaps = 22/223 (9%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    ++R  I +++R    +  F E  +  L 
Sbjct: 111 PLPVFGEPDYPEDVRLKYRFLDLRRETLHKNIVRRTEIIAAMRRRMGDIGFTEYTTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRIH---PGNFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAA-EVANQKIFSFQNVNCNPFSEPE 166
                 P EF  L+   +    E +      +IR    + A  K  + +       +   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVEQEDVWDAMEPMIRAIFSDFAGGKPVTDKFPRIPYDTAIR 284

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                +   R        T        +    + A    + + 
Sbjct: 285 KYGSDKPDLRNPIEMQEVTEHFAGSGFKVFANMIASNPKVEIW 327



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 48/166 (28%), Gaps = 17/166 (10%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +          I      E  E    ++        P       +    
Sbjct: 413 EARTRAGEELNLVDRDRYELCWIVDFPFYEWNEEEKRVDFAHNPFSMPQGGLTALSSDDL 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDED 308
                 ++++     E+ +       P      FE       +++E+             
Sbjct: 473 LSIKAFQYDMVCNGFEIASGSIRNQSPELMVKAFENVGLSQADVEERFGG---------- 522

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                    P   G+A G DR+VML+ GA N+ E+   P +Q  Q+
Sbjct: 523 LYRAFQYGAPPHGGMAFGIDRIVMLLVGAKNLREISLFPMNQQAQD 568


>gi|319407180|emb|CBI80819.1| Aspartyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 596

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 68/196 (34%), Gaps = 29/196 (14%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  +    ++R  I +S+R +  +  F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETMHKNIMRRTEIIASIRRHMQDCAFTEFTTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     I     K   L  +P+   + L+ +G ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRIH--QGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +    E ++     IIR   E         QN           
Sbjct: 225 PRADRLPGEFYQLDIEMSFVEQEDILVTMEPIIRSIFEEFADGKSVTQN--------FPR 276

Query: 168 ITVAEAFARYANIDLG 183
           I+  EA  +Y +    
Sbjct: 277 ISYDEAMQKYGSDKPD 292



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 45/150 (30%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+      +++ I      E  E    ++        P       +          +
Sbjct: 420 EELGLIDRECFSFAWIIDFPFFEWNEDEKKLDFAHNPFSMPQGGKNALDSQDPLSLKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P      F                ++E F           P
Sbjct: 480 YDLVCNGYEIASGGIRNHSPEMMLKVF-------NLAGLSQEVVEERFGGLYRAFHYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR+VML+ G  N+ EV   P 
Sbjct: 533 PHGGMAAGIDRIVMLLQGVKNLREVSLFPM 562


>gi|218461682|ref|ZP_03501773.1| aspartyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 499

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 64/191 (33%), Gaps = 29/191 (15%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    +KR ++ S++R       F E  +  L 
Sbjct: 111 PLPVFGEPDYPEDVRLKYRFLDLRRETLHRNIVKRTLVISAMRREMGAVGFTEYTTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 171 ASSPEGA---RDFLVPSRIH---PGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E +                 +IF           E   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVTQEDVWNTMG--------PLMTQIFEEFAEGKPVTKEWPR 276

Query: 168 ITVAEAFARYA 178
           I   EA  +Y 
Sbjct: 277 IPYDEAIRKYG 287


>gi|299133732|ref|ZP_07026926.1| aspartyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591568|gb|EFI51769.1| aspartyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 590

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 65/204 (31%), Gaps = 7/204 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R  I  S+R    +  F E  +  L   SP      R F     I    
Sbjct: 134 RREKLHQNIMTRGQIIDSMRARMKKEGFFEFQTPILTASSPEG---ARDFLVPSRIH--A 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +  + + 
Sbjct: 189 GKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLEMSFVTQDD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    E         +N    PF+E       +       + +    ++   
Sbjct: 249 VFAAMEPVITGVFEDFANGKPVTKNWPRIPFAESLRKYGTDKPDLRNPLIMQNVSEHFRG 308

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWS 215
               +     +QAG  V       
Sbjct: 309 SGFKVFARMLEQAGNEVWAIPGPG 332



 Score = 78.5 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 49/159 (30%), Gaps = 11/159 (6%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
              ++  +        + I    + E  E    ++        P                
Sbjct: 413 KLGEELNLIDKDRFELAWIVDFPMYEYNEEEKKVDFSHNPFSMPQGGLEALQTQDPLTIK 472

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-T 314
             ++++     E+ +       P      FE         Y E   + E F         
Sbjct: 473 AFQYDIACNGYEIASGGIRNHKPAAMVKAFEI------AGYGEETVV-ERFGGMYRAFQY 525

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   G+A G DR+VML+ G NN+ E+   P +Q  ++
Sbjct: 526 GAPPHGGMAAGVDRIVMLLCGTNNLREISLFPMNQRAED 564


>gi|300176712|emb|CBK24377.2| Aspartyl-tRNA synthetase [Blastocystis hominis]
          Length = 680

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMP 317
           +K  +L     E+      + D   Q+      ++        +  +    L  L    P
Sbjct: 507 SKSCDLVLNGNEVGGGSLRIHDFDLQKTILTDVLKI------SSPDVFHHLLNALKQGCP 560

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
              G A+G DRL+ L+ G  +I +VI  P
Sbjct: 561 PHGGFAIGLDRLLSLLRGKASIRDVIAFP 589



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 6/136 (4%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFST 64
           S+       H   +  +  R+    SLR     + F E+++  L   SP        F  
Sbjct: 161 SKYRHLTLRHPEYQNEIRFRSEFLHSLRLSLHSHHFTEVETPLLTRSSPEG---AHEFYV 217

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
              +         L  SP+   + L+A+G ++ F  A  +RN       Q EFT L+   
Sbjct: 218 PSALIPRGG--FALSQSPQQYKQILMASGIDRYFQIARCFRNESGRKDRQLEFTQLDIEM 275

Query: 125 AHESYEQLMKDCMNII 140
           A+ +    ++  +  +
Sbjct: 276 AYITDLSEIQSTIQNL 291


>gi|86749616|ref|YP_486112.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|123292659|sp|Q2IX59|SYD_RHOP2 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|86572644|gb|ABD07201.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 590

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 62/198 (31%), Gaps = 26/198 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   R R            ++ R  I  ++R+   E  F E  +  L   SP      R 
Sbjct: 123 DVRLRYRFLDLRREKLHQNIMTRGAIVDAMRKRMKEQGFFEFQTPILTASSPEG---ARD 179

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTML 120
           F     I     K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L
Sbjct: 180 FLVPSRIH--PGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQL 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  +         + +  A E     +F               I   E+  +Y   
Sbjct: 238 DVEMSFVT--------QDDVFAAMEPVITGVFEDFAKGKPVTKSWPRIPYFESLRKY-GT 288

Query: 181 DLGTTLDNPDQPDRHLLY 198
           D     +  +  D    +
Sbjct: 289 DKPDLRNPLEMQDVSEHF 306



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + +    + E  E +  ++        P                  +
Sbjct: 416 EELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMDALTSQDPLTIKAFQ 475

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQ 318
           +++     E+ +       P      FE         Y E   ID             P 
Sbjct: 476 YDITCNGYEIASGGIRNHRPEAMVKAFEI------AGYGEQEVIDRFGGMYRAFQYGAPP 529

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G+A G DR+VML+ G NN+ E+   P +Q  ++
Sbjct: 530 HGGMAAGVDRIVMLLCGTNNLREISLFPMNQRAED 564


>gi|47215828|emb|CAF96791.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3152

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 84/278 (30%), Gaps = 22/278 (7%)

Query: 21   FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
             L  R+ +    R++F    + EI   +L  +   + +       L   ++  + +YL  
Sbjct: 2554 ILRVRSTVTQCFRDHFFSRGYYEITPPTLVQTQVEDGY------TLFKLNYFGEQVYLTQ 2607

Query: 81   SPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
              +   +  + A     FC A ++R  +     H  EFT +E      S++ L+    ++
Sbjct: 2608 CSQLYLETCIPA-LGDTFCIAQSYRAEQSRTRRHLSEFTHVEAECPFISFDDLLNGLEDL 2666

Query: 140  I-----RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
            I     R     A   +         P      +   EA       D+        +   
Sbjct: 2667 ICDVVDRVLKSPAGGLLHDINPTFKPPKRPFRRMNYTEAIEWLREHDIKKDDGTFYEFGE 2726

Query: 195  HLLYLQAQQAGIRVA-----HDDTWSDIFSRILIEKIEPNLGINCCT---ILDRYPAPES 246
             +    A+   +                 S+++    +P           I + YP    
Sbjct: 2727 IIELYPAETLDLMTKEMMSVPCWMLIGWISQMVAMLDKPEGVAVQHCLEQIAECYPQALV 2786

Query: 247  ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
                I     +F +   +     +  + C ++ +   Q
Sbjct: 2787 YALMISSETYQF-EDSAIGHKQHQFVSRCSQIYNKWLQ 2823


>gi|153009868|ref|YP_001371083.1| aspartyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|166225369|sp|A6X200|SYD_OCHA4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|151561756|gb|ABS15254.1| aspartyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 595

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 23/202 (11%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L K    R  I +++R    E  F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFTTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRIH---EGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P EF  L+   +  + E++ +    ++R   E   +     Q      + +  
Sbjct: 224 DPRADRLPGEFYQLDLEMSFVTQEEVWETMEPVMRGIFEEFAEGKPVTQQFRRIAYDDAI 283

Query: 167 YITVAEAFARYANIDLGTTLDN 188
               ++       I++    ++
Sbjct: 284 RTYGSDKPDLRNPIEMQAVTEH 305



 Score = 79.3 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E N  ++        P                  +
Sbjct: 420 EELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENQDPLAIKAYQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P      FE       K+      ++E F           P
Sbjct: 480 YDLVCNGFEIASGSIRNQLPDVMVKAFE-------KVGLSQQDVEERFGGLYRAFQYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR++ML+ GA N+ E+   P 
Sbjct: 533 PHGGMAAGIDRVIMLLVGAKNLREISLFPM 562


>gi|262401457|gb|ACY66629.1| lysyl-tRNA synthetase isolate 2-like protein [Scylla paramamosain]
          Length = 97

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
           + +  +++ + +E        T +  +P   S LA  + +    T+RFEL+    E+ NA
Sbjct: 3   ARLLDKLVGDFLEEQC--ISPTFIMDHPQVMSPLAKYHRSIKGLTERFELFVAKKEIVNA 60

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
             EL DP++QR RF ++ Q+K    +E   IDE+F  
Sbjct: 61  YTELNDPLDQRARFMQQAQDKMAGDDEAQMIDENFCT 97


>gi|149915882|ref|ZP_01904406.1| aspartyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149810205|gb|EDM70051.1| aspartyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 592

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 63/201 (31%), Gaps = 7/201 (3%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTE 65
           +  +        +  +  R+ + +S+R    +  F E  +  +   SP      R F   
Sbjct: 127 RHRYLDLRREEMQRNMTLRSDVVASIRRRMWDKGFREYQTPIITASSPEG---ARDFLVP 183

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYR 124
             +     +   L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   
Sbjct: 184 SRLH--PGRFYALPQAPQLFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEM 241

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +    + +      ++    E         ++     + +       +       I +  
Sbjct: 242 SFVEQQDVFDTIQPVLESVFEEFGPGHKVDKHWPHISYRDAALWYGTDKPDLRNPIKMQD 301

Query: 185 TLDNPDQPDRHLLYLQAQQAG 205
             ++       +     +Q G
Sbjct: 302 VSEHFRGSGFAIFAKLLEQDG 322



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       +  +    + EK +    I+        P       +  P +      
Sbjct: 419 EELGLTDKDRFAFCWVVDFPMYEKDDETGKIDFSHNPFSMPQGGLDALSGDPLE------ 472

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKK-KIYNETYPIDEDF---LACL-TEM 316
             L       CN   EL+    + H+ +  ++  +   Y+E   + + F   +       
Sbjct: 473 -VLGFQYDLACNGY-ELVSGAIRNHKLDIMIKAFELAGYDEA-EVHKRFGGLVNAFQYGA 529

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 530 PPHGGCAAGIDRIVMLLANEQNIREVIMFPMNQRAED 566


>gi|149200875|ref|ZP_01877850.1| aspartyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149145208|gb|EDM33234.1| aspartyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 593

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 64/192 (33%), Gaps = 29/192 (15%)

Query: 4   IPSQPWWNRD----FHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P Q + +++       R R            ++ R+ + +++R    +  F E  +  +
Sbjct: 110 LPLQVFGDQEYPEETRLRYRYLDLRREAMQRNMVLRSDVVAAMRRRMWDKGFREFQTPII 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     +        Y L  +P+   + ++ +G +K F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRLH---PGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P +F  L+   +    + +      +I    +              +      
Sbjct: 224 DPRADRSPTDFYQLDLEMSFVEQQDVFDTIAPVIAGVFQEFGGD------KTVDAPEAWP 277

Query: 167 YITVAEAFARYA 178
            I+ A++   Y 
Sbjct: 278 QISYADSALWYG 289



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 12/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            + G+   +   ++ I    + E  E    ++        P       +  P        
Sbjct: 421 DELGLTDQNRFAFAWIVDFPMYEADETTGKVDFSHNPFSMPQGGIDALSGDPLK------ 474

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
             L       CN   EL+    + H+ +  ++  +        + + F   +       P
Sbjct: 475 -VLGYQYDLACNGY-ELVSGAIRNHKLDIMIKAFELAGYGEEEVRKRFGGMVNAFQYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G A G DR+VML+ G +NI EVI  P +Q  ++
Sbjct: 533 PHGGCAAGIDRIVMLLAGTSNIREVIMFPMNQRAED 568


>gi|148707382|gb|EDL39329.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_a [Mus
           musculus]
          Length = 526

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 206 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGA---KEFLVPSREPGKF---YSLP 259

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      + +    +
Sbjct: 260 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVEQTGIQRLVEGL 319

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+        +    +T AEA A Y   D   T       D
Sbjct: 320 LQY----------SWPGDKDPLVTPFPSMTFAEALATY-GTDKPDTRFGMKIVD 362


>gi|330927912|ref|XP_003302056.1| hypothetical protein PTT_13732 [Pyrenophora teres f. teres 0-1]
 gi|311322828|gb|EFQ89869.1| hypothetical protein PTT_13732 [Pyrenophora teres f. teres 0-1]
          Length = 633

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 58/173 (33%), Gaps = 18/173 (10%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI------EPNLGINCCTILDRYP----- 242
           R  L+  A   G+  A ++                    EP  G         +P     
Sbjct: 443 RLALHKAAIAQGLINAPEEQDYKFLWITDFPLFTPSSDSEPGQGGEAGFSSTHHPFTAPK 502

Query: 243 APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
            PE     +          +++    +EL      +     Q   F+  ++ K     E 
Sbjct: 503 TPEDVEILLSDPSAAKAAHYDIVVNGVELGGGSRRIHSAAVQEFIFKDILKMK----PER 558

Query: 303 YPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
                  L  L +  P  +GIA+G+DRL+ ++    ++ +VI  P  +S + E
Sbjct: 559 IEDFRHLLDVLRSGCPPHAGIALGWDRLMAVLCHRESVRDVIAFP--KSGKGE 609



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+   +  R++     + EI++  L + +P      R F      +        
Sbjct: 167 RQNLILRSEAMAMARQHLNAQMWKEIETPVLFKSTPEG---AREFLVPTRQK---GLAYA 220

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+A+G  K + FA  +R+ +     QPEFT L+   A    E++M++  
Sbjct: 221 LPQSPQQYKQILMASGITKYYQFARCFRDEDLRVDRQPEFTQLDMEMAFAGEEEVMQEIE 280

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +++   +  N         N       E +T  EA A Y +    
Sbjct: 281 RLLKEVWKHVN---------NVTLHGRFERMTYHEAMASYGSDKPD 317


>gi|306843697|ref|ZP_07476297.1| aspartyl-tRNA synthetase [Brucella sp. BO1]
 gi|306276007|gb|EFM57716.1| aspartyl-tRNA synthetase [Brucella sp. BO1]
          Length = 595

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 74/223 (33%), Gaps = 22/223 (9%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L K    R  I +++R    E  F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     I     K   L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRIH--PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E++ +    ++    E   +     +      + +   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVTQEEVWETMEPVMHGIFEEFAEGKPVTKVFRRIAYDDAIR 284

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYL-QAQQAGIRVA 209
              ++       I++    D+       +     A  A + V 
Sbjct: 285 TYGSDKPDLRNPIEMQAVTDHFAGSGFKVFANMIANDAKVEVW 327



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E N  ++        P                  +
Sbjct: 420 EELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENMDPLEIKAYQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P       E  ++  +K+      ++E F           P
Sbjct: 480 YDLVCNGFEIASGSIRNQLP-------EVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR++ML+ GA N+ E+   P 
Sbjct: 533 PHGGMAAGIDRVIMLLVGAKNLREISLFPM 562


>gi|319405614|emb|CBI79237.1| Aspartyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 596

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 64/196 (32%), Gaps = 29/196 (14%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  +    ++R  I +S+R +     F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETMHKNIMRRTAIIASIRRHMQNCAFTEFTTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     I     +   L  +P+   + L+ +G ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRIH--QGQFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +              I    E   + IF       +       
Sbjct: 225 PRADRLPGEFYQLDIEMSFV--------EQEDIFVTIEPIIRSIFEEFADGKSVTQNFPR 276

Query: 168 ITVAEAFARYANIDLG 183
           I+  EA  +Y +    
Sbjct: 277 ISYDEAMQKYGSDKPD 292



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+      +++ I      E  E    ++        P       ++         +
Sbjct: 420 EELGLIDRDCFSFAWIVDFPFFEWNEEEKKLDFAHNPFSMPQGGENALDLQDPLSLKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P      F+     K+        ++E F           P
Sbjct: 480 YDLVCNGCEIASGGIRNHSPEMMLKVFKLVGFSKE-------VVEERFGALYRAFHYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR+VML+ G  N+ EV   P 
Sbjct: 533 PHGGMAAGIDRIVMLLQGVKNLREVSLFPM 562


>gi|254718870|ref|ZP_05180681.1| aspartyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265983855|ref|ZP_06096590.1| aspartyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306837627|ref|ZP_07470497.1| aspartyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|306842000|ref|ZP_07474674.1| aspartyl-tRNA synthetase [Brucella sp. BO2]
 gi|264662447|gb|EEZ32708.1| aspartyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306287928|gb|EFM59345.1| aspartyl-tRNA synthetase [Brucella sp. BO2]
 gi|306407276|gb|EFM63485.1| aspartyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 595

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 70/201 (34%), Gaps = 21/201 (10%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L K    R  I +++R    E  F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETLHKNIMSRTKIIAAMRRRMTEIGFNEFSTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     I     K   L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRIH--PGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E++ +    ++R   E   +     +      + +   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVTQEEVWETMEPVMRGIFEEFAEGKPVTKVFRRIAYDDAIR 284

Query: 168 ITVAEAFARYANIDLGTTLDN 188
              ++       I++    D+
Sbjct: 285 TYGSDKPDLRNPIEMQAVTDH 305



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E N  ++        P                  +
Sbjct: 420 EELNLVDRDRFELAWIIDFPFYEWDEDNKKLDFAHNPFSMPQGGMDALENMDPLEIKAYQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P       E  ++  +K+      ++E F           P
Sbjct: 480 YDLVCNGFEIASGSIRNQLP-------EVMVKAFEKVGLSQQDVEERFGGLYRAFQYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR++ML+ GA N+ E+   P 
Sbjct: 533 PHGGMAAGIDRVIMLLVGAKNLREISLFPM 562


>gi|296811002|ref|XP_002845839.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238843227|gb|EEQ32889.1| aspartyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 687

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 67/190 (35%), Gaps = 20/190 (10%)

Query: 3   QIPSQPWWNR-DFHYRRRPFLLKRNMIQSSLREYFVENQ--FIEIDSMSL-QYSPGNETH 58
               +    R D   R+   L  R     +LR    E +  F+E+++  L + +P     
Sbjct: 201 PPSKRHLQIRNDASLRQ--SLAFRAKANVALRRALEEFEPPFLEVETPILFKSTPEG--- 255

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
            R F      +        L  SP+   + L+A+G  + + FA  +R+ +     QPEFT
Sbjct: 256 AREFLVPTRNR---GLAYALPQSPQQYKQMLMASGIPRYYQFARCFRDEDLRADRQPEFT 312

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   +  +           +    E   +K+++              ++   A + Y 
Sbjct: 313 QLDMEMSFAT--------AEDVMTTTEALVKKLWASVMPEPLAPEPFPRMSYHMAMSLYG 364

Query: 179 NIDLGTTLDN 188
           +    T  D 
Sbjct: 365 SDKPDTRFDM 374



 Score = 76.2 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 61/245 (24%), Gaps = 12/245 (4%)

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
                  F      +              I                        E E+  
Sbjct: 413 TMRVLNSFMNTSEGKYFLDNPDGAPGVFAIDSSKPMSGLSPAGFEAAWELERLFELEHGD 472

Query: 170 VAEAFARY-ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF-SRILIEKIE 227
           +     R       G+T     +   H   ++ +     V  +  W   F         E
Sbjct: 473 LLFFQPRKDEPFSGGSTRAGELRLAMHRFMVEKEFHSPPVGFNFHWITGFPLFSPSVDSE 532

Query: 228 PNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
           P  G         +P       E A   +          ++L    +EL      +    
Sbjct: 533 PGQGGTAGIASTHHPFTAPRTAEDAALLLTDPIKAIADHYDLVVNGVELGGGSRRIHSAA 592

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
            Q       ++                L CL    P  +GIA+GFDRL+ ++ G  ++  
Sbjct: 593 VQELILRDILKV----PPSRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSVRN 648

Query: 342 VIWTP 346
           VI  P
Sbjct: 649 VIAFP 653


>gi|156550606|ref|XP_001604266.1| PREDICTED: similar to SD02215p [Nasonia vitripennis]
          Length = 634

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 49/155 (31%), Gaps = 10/155 (6%)

Query: 194 RHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           R       +  G+ +      ++ I    L E  E    +         P PE     + 
Sbjct: 450 RVEFTDIMESKGLTIRESGYKFAWIIDFPLFEIDEDTKCLKTTHHPFTMPHPEDMQNLLT 509

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
                   +++L     E+      +     Q   F+        I   T       L  
Sbjct: 510 APLKVRGLQYDLTLNGSEIGGGSIRIHQKALQEQIFKMLN-----IDPSTMYY---MLEA 561

Query: 313 LT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           L    P   GIA+G DR + ++ GA +I +VI  P
Sbjct: 562 LDCGAPPHGGIALGLDRYMSVICGAPSIRDVIAFP 596



 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 18/159 (11%)

Query: 22  LLKRNMIQSSLREYFVEN-QFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY +   +F+++ + +L + +PG       F        H+ K   L 
Sbjct: 188 LRLRSWVTMKMREYLINQCEFVDVATPTLFRKTPGGAQE---FVVPTK---HLGKFYSLV 241

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT L+   +    E +M    N+
Sbjct: 242 QSPQQFKQLLMVGGIDRYFQMAQCYRDEGSRQDRQPEFTQLDIEMSFVDREDIMDLTENL 301

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           I  +   + +K +               +T  E+   Y 
Sbjct: 302 IANSWPESVEKHYP----------PFPRLTYEESMETYG 330


>gi|298346860|ref|YP_003719547.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298236921|gb|ADI68053.1| aspartate--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 448

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 11/113 (9%)

Query: 239 DRYPAPESALANIYPADPRFT--KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
             + +P+    + +  DP       +++    +EL      +     Q   F      K 
Sbjct: 299 HAFTSPKPECLDTFDTDPGSALAYAYDIVCNGVELGGGSIRIHRRDIQERVF------KV 352

Query: 297 KIY--NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +   E        L       P   G+A+G+DR+  ++TG+ +I +VI  P
Sbjct: 353 MGFSQEEAQARFGFLLDAFKYGAPPHGGLALGWDRIAGMLTGSPSIRDVIAFP 405



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 66/190 (34%), Gaps = 8/190 (4%)

Query: 36  FVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGE 94
             E++F+EI++ +L   +P      R F     I         L  SP+   + L+  G 
Sbjct: 1   MEEHEFLEIETPTLTRSTPEG---ARDFVVPARI--RPGSWYALPQSPQLFKQLLMVGGM 55

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
           E+ F  A  +R+ +     QPEFT L+   +    + +++   ++++   +V    + + 
Sbjct: 56  ERYFQLARCYRDEDSRADRQPEFTQLDMEMSFVDQDDVIEVTEHLLKEIWKVIGYDLTT- 114

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
             +   PF E      ++        +L    D        +       A +        
Sbjct: 115 -PIPRMPFQEAMDRFGSDKPDLRFGYELVDLTDFFKDTPFKIFQAPYVGAVVMPGGGSQP 173

Query: 215 SDIFSRILIE 224
              F +    
Sbjct: 174 RRTFDKWQEW 183


>gi|254488012|ref|ZP_05101217.1| aspartyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214044881|gb|EEB85519.1| aspartyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 616

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 65/195 (33%), Gaps = 9/195 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  ++ R+ + SS+R+   + +F E  +  +   SP      R F     +    
Sbjct: 134 RREKMQANMVLRSDVVSSIRKRMWDRKFKEFQTPIITASSPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G +K F  A  +R+ +      P +F  L+   +    +
Sbjct: 188 PGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVEQQ 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      ++    E         Q      + +      ++       I +    ++  
Sbjct: 248 DVFDTIQPVLTGIFEEFGGGKSVDQEWPQISYKDAALWYGSDKPDLRNPIKMQVVSEHFA 307

Query: 191 QPDRHLLYLQAQQAG 205
                +     +Q G
Sbjct: 308 GSGFAIFAKLLEQEG 322



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 52/157 (33%), Gaps = 16/157 (10%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G+   +   ++ I    + EK      I+        P          P +     ++
Sbjct: 445 ELGLTDENRFAFAWIVDFPIYEKDAETGKIDFEHNPFSMPQGGMDALMGDPLEV-LGYQY 503

Query: 263 ELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTEM 316
           +L     EL +       P      FE       E++++       +             
Sbjct: 504 DLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKDEVEKRFGGMVNAFQ---------YGA 554

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 555 PPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAED 591


>gi|114704848|ref|ZP_01437756.1| aspartyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114539633|gb|EAU42753.1| aspartyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 595

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 61/190 (32%), Gaps = 27/190 (14%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    ++R  I S +RE      F E  +  L 
Sbjct: 111 PLPVFGEPEYPEDIRLKYRFLDLRRETLHKNIMRRTKIISKIRELMQGAAFTEFQTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             SP      R F     + +       L  +P+   + L+ +G ++ F  A  +R+ + 
Sbjct: 171 ASSPEG---ARDFLVPSRLHN--GMFYALPQAPQQYKQLLMISGFDRYFQIAPCFRDEDP 225

Query: 110 G-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                  EF  L+   +              I    E   + +F               I
Sbjct: 226 RADRFYGEFYQLDVEMSFV--------EQEDIFQTMEPVIRDVFKTFADGKPVTDTFRRI 277

Query: 169 TVAEAFARYA 178
             AE+  +Y 
Sbjct: 278 PYAESMRKYG 287



 Score = 75.8 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E    I+        P                  +
Sbjct: 420 EELNLVDRDRYELAWIVDFPFYEYDEDEKKIDFAHNPFSMPQGGMDALQNEEPLSIKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           +++     E+ +       P      FE         Y++   ++E F           P
Sbjct: 480 YDVVCNGFEIASGGIRNSVPETMVKAFE------LAGYDQA-TVEERFGGLYRAFQYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR+VML+ GA N+ E+   P 
Sbjct: 533 PHGGMAAGIDRIVMLLCGARNLREIALFPM 562


>gi|316933726|ref|YP_004108708.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601440|gb|ADU43975.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 591

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 61/198 (30%), Gaps = 26/198 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   R R            ++ R  I  S+R    E  F E  +  L   SP      R 
Sbjct: 123 DVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEG---ARD 179

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTML 120
           F     I     K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L
Sbjct: 180 FLVPSRIH--PGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQL 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  +           +  A E     +F               I  A++  +Y   
Sbjct: 238 DVEMSFIT--------QEDVFAAMEPVITGVFEEFAKGKRVTKGWPRIAFADSMRKY-GT 288

Query: 181 DLGTTLDNPDQPDRHLLY 198
           D     +  +  D    +
Sbjct: 289 DKPDLRNPIEMQDVSEHF 306



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + +    + E  E +  ++        P                  +
Sbjct: 416 EELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALTSQDPLTIKAFQ 475

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQ 318
           +++     E+ +       P      FE         Y E   ID             P 
Sbjct: 476 YDITCNGYEIASGGIRNHRPEAMVKAFEI------AGYGEQEVIDRFGGMYRAFQYGAPP 529

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G+A G DR+VML+ G  N+ E+   P +Q  ++
Sbjct: 530 HGGMAAGVDRIVMLLCGTTNLREISLFPMNQRAED 564


>gi|319784194|ref|YP_004143670.1| aspartyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170082|gb|ADV13620.1| aspartyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 598

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 69/224 (30%), Gaps = 24/224 (10%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L    + R  I + +R+   E  F E  +  L
Sbjct: 112 LPLPVFGEPDYPEDIRLKYRFLDLRRETLHKNIIARTKIIAEMRKRMGEVGFTEFSTPIL 171

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     I        Y L  +P+   + ++ +G ++ F  A  +R+ 
Sbjct: 172 TASSPEG---ARDFLVPSRIH---PGTFYALPQAPQQYKQLIMVSGFDRYFQIAPCFRDE 225

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEP 165
           +      P EF  L+   +    + ++     ++R   E  AN K  +            
Sbjct: 226 DPRADRLPGEFYQLDLEMSFVEQDDVLSTMEPVMRGVFETFANGKPVTQNFQRIPYDVAM 285

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                 +   R        +    D   +    + A      V 
Sbjct: 286 RKYGSDKPDLRNPIEMQAVSDHFRDSGFKVFANILANDPKAEVW 329



 Score = 75.8 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 47/150 (31%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +          I      E  E    I+        P       N          +
Sbjct: 422 EELNLVDRERFELCWIVDFPFFEWNEEEKKIDFAHNPFSMPQGGIDALNGEDLLGIKAFQ 481

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           +++     E+ +       P       E  ++  + +  +   ++E F           P
Sbjct: 482 YDMVCNGFEIASGGIRNHLP-------ETMVKAFETVGLDRATVEERFGGLYRAFQYGAP 534

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR+VML+ GA N+ E+   P 
Sbjct: 535 PHGGMAAGVDRVVMLLLGAKNLREITMFPM 564


>gi|189202468|ref|XP_001937570.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984669|gb|EDU50157.1| aspartyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 633

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 12/134 (8%)

Query: 227 EPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P      PE     +          +++    +EL      +   
Sbjct: 482 EPGQGGEAGFSSTHHPFTAPKTPEDVELLLTDPSAAKAAHYDIVVNGVELGGGSRRIHSA 541

Query: 282 IEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q   F+  ++ K     E        L  L +  P  +GIA+G+DRL+ ++    ++ 
Sbjct: 542 AVQEFIFKDILKMK----PERVEDFRHLLDVLRSGCPPHAGIALGWDRLMAVLCHRESVR 597

Query: 341 EVIWTPFSQSNQEE 354
           +VI  P  +S + E
Sbjct: 598 DVIAFP--KSGKGE 609



 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  L+ R+   +  R +   + + EI++  L + +P      R F      +        
Sbjct: 167 RQNLILRSEAMAKARLHLNAHMWKEIETPILFKSTPEG---AREFLVPTRQK---GLAYA 220

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+A+G  K + FA  +R+ +     QPEFT L+   A    E++M++  
Sbjct: 221 LPQSPQQYKQILMASGITKYYQFARCFRDEDLRVDRQPEFTQLDMEMAFAGEEEVMEEIE 280

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +++   +  N         N     + + +T  EA   Y +    
Sbjct: 281 QLLKEVWQHVN---------NVTLRGKFQRMTYHEAMTSYGSDKPD 317


>gi|322704787|gb|EFY96378.1| putative aspartate--tRNA ligase [Metarhizium anisopliae ARSEF 23]
          Length = 694

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 7/98 (7%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK-KIYNETYPIDEDFLACLTEM 316
            +  ++L    IE+    + +     Q       ++    +I + ++  D   L      
Sbjct: 576 RSAAYDLVLNGIEIGGGSERIHVADVQEFIMRDVLKMTDQRIKDFSHLFDA--LRA--GC 631

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
           P  +G A+GFDRLV L+T  + + +VI  P  ++ + E
Sbjct: 632 PPHAGFALGFDRLVALLTDTSTVRDVIAFP--KTMKGE 667



 Score = 73.5 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 8/126 (6%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRA 61
               +    R FH   +  L  R+ ++  L +  +E  F ++++ +L + +       R 
Sbjct: 175 PQTKRHLQIR-FHPELQARLQFRSWLKGQLNQSLLEKGFTDVETPTLFKSTSEG---ARE 230

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F      +        L  SP+   + L+A+G  +   +A  +R+ +     QPEF+ L+
Sbjct: 231 FLVPTRQR---GTAYALSQSPQQYKQILMASGIGQYMQWARCYRDEDLRTDRQPEFSQLD 287

Query: 122 WYRAHE 127
              A  
Sbjct: 288 MEWAFA 293


>gi|270624655|ref|ZP_06221913.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270317679|gb|EFA29093.1| aspartate--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 74

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L  L    P  +G+A G DRL ML+TG  NI +VI  P
Sbjct: 3   FLLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFP 42


>gi|91977416|ref|YP_570075.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123721770|sp|Q135R5|SYD_RHOPS RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91683872|gb|ABE40174.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 590

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 62/198 (31%), Gaps = 26/198 (13%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRA 61
           D   R R            ++ R  I  ++R    +  F E  +  L   SP      R 
Sbjct: 123 DVRLRYRFLDLRREKLHQNIMTRGAIVDAMRARMKQQGFFEFQTPILTASSPEG---ARD 179

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTML 120
           F     I     K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L
Sbjct: 180 FLVPSRIH--PGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQL 237

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +   +  +         + +  A E     +F               I  A++  +Y   
Sbjct: 238 DVEMSFVT--------QDDVFAAMEPVITGVFEDFAKGKRVTKGWPRIPYADSMRKY-GT 288

Query: 181 DLGTTLDNPDQPDRHLLY 198
           D     +  +  D    +
Sbjct: 289 DKPDLRNPIEMQDVSEHF 306



 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + +    + E  E +  ++        P                  +
Sbjct: 416 EELNLIDKDQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMDALLGQDPLTIKAFQ 475

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQ 318
           +++     E+ +       P      FE         Y E   +D             P 
Sbjct: 476 YDITCNGFEIASGGIRNHRPEAMVKAFEI------AGYGEQEVVDRFGGMYRAFQYGAPP 529

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G+A G DR+VML+ G NN+ E+   P +Q  ++
Sbjct: 530 HGGMAAGVDRIVMLLCGTNNLREISLFPMNQRAED 564


>gi|322698256|gb|EFY90028.1| putative aspartate--tRNA ligase [Metarhizium acridum CQMa 102]
          Length = 694

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 12/134 (8%)

Query: 227 EPNLGINCCTILDRYP-----APESALANIYPADPRFTKRFELYACNIELCNACDELLDP 281
           EP  G         +P     + +             +  ++L    IE+    + +   
Sbjct: 540 EPGQGGAAGISAAHHPFTAPLSEKDLEILFTDPLQARSAAYDLVLNGIEIGGGSERIHVA 599

Query: 282 IEQRHRFEKEMQEKK-KIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
             Q       ++    +I + ++  D   L      P  +G A+GFDRLV L+T  + + 
Sbjct: 600 DVQEFIMRDVLKMTDQRIKDFSHLFDA--LRA--GCPPHAGFALGFDRLVALLTDTSTVR 655

Query: 341 EVIWTPFSQSNQEE 354
           +VI  P  ++ + E
Sbjct: 656 DVIAFP--KTMKGE 667



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 8/126 (6%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRA 61
               +    R FH   +  L  R+ ++S L +  +E +F ++++ +L + +       R 
Sbjct: 175 PQTKRHLQIR-FHPELQARLKFRSWLKSQLNQSLLEKRFTDVETPTLFKSTSEG---ARE 230

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F      +        L  SP+   + L+A+G  +   +A  +R+ +     QPEF+ L+
Sbjct: 231 FLVPTRQR---GTAYSLSQSPQQYKQVLMASGIGRYMQWARCYRDEDLRTDRQPEFSQLD 287

Query: 122 WYRAHE 127
              A  
Sbjct: 288 MEWAFA 293


>gi|325989663|ref|YP_004249362.1| aspartyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574748|emb|CBZ40404.1| Aspartyl-tRNA synthetase [Mycoplasma suis]
          Length = 543

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 64/200 (32%), Gaps = 7/200 (3%)

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
           + KI   Q  +       +    +E F  Y       + D  +   R      A    I+
Sbjct: 335 HSKIIEGQYDDWMISFSEKLNNHSEEF--YLFYICCNSGDKRESLLRMGRIRTAIIKQIK 392

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
               +    +         E +L     T    +  P     +        +  ++L   
Sbjct: 393 NREWENNFSLVWITDWPYFEESLEGKLVTSHHPFTLPTKDSLSKDNLLDWKSHGYDLVLN 452

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
            +E+ +    + +   Q   F       ++I  E       FL  L   +P   GIA+G+
Sbjct: 453 GVEIASGGQRIYNSDLQAKIFSILGYSSEEINQE----FGWFLEALNYGVPPHLGIAIGW 508

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DRL+  +    +I EVI  P
Sbjct: 509 DRLMSELLNLKSIREVIAFP 528



 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 98/301 (32%), Gaps = 38/301 (12%)

Query: 15  HYRRRPFLLKRNMIQSSLR----------EYFVENQFIEIDSMSLQ-YSPGNETHIRAFS 63
             + R   L+R+ +  ++            Y     F EI +  L   S         F 
Sbjct: 114 RMKYRYLDLRRSSLHKNIEFCSKAKFIASSYLHSLNFREITTPILSFPSREGA---ETFK 170

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           TE  +   + +   L  SP+   + L+ AG EK F FA ++R  +     Q EF+ L+  
Sbjct: 171 TEENVN--VNRSFTLAQSPQIYKQLLMIAGFEKYFQFATSFRAEKMREDRQYEFSQLDIE 228

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E+L      II        +K+      +         I+  EAF +Y   D  
Sbjct: 229 MSFSTQEKLF----AIIEKLLISLIKKLVKSDFPDL----PFRRISFQEAFEKY-GTDKP 279

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP---NLGINCCTILDR 240
               +P   D    + + Q     V        +        IE     +G +   I   
Sbjct: 280 DLRFSPYIVDLFSSFDKKQ-----VLPTQYCLSLLVERKTINIEELYSEVGRDFKYIKKS 334

Query: 241 YPAPES-----ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           +           + +        ++ F L+       +  + LL     R    K+++ +
Sbjct: 335 HSKIIEGQYDDWMISFSEKLNNHSEEFYLFYICCNSGDKRESLLRMGRIRTAIIKQIKNR 394

Query: 296 K 296
           +
Sbjct: 395 E 395


>gi|148707384|gb|EDL39331.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_c [Mus
           musculus]
          Length = 547

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 206 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGKF---YSLP 259

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      + +    +
Sbjct: 260 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVEQTGIQRLVEGL 319

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+        +    +T AEA A Y   D   T       D
Sbjct: 320 LQY----------SWPGDKDPLVTPFPSMTFAEALATY-GTDKPDTRFGMKIVD 362


>gi|148707383|gb|EDL39330.1| aspartyl-tRNA synthetase 2 (mitochondrial), isoform CRA_b [Mus
           musculus]
          Length = 506

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F++I++ +L + +PG     + F               L 
Sbjct: 165 LRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGG---AKEFLVPSREPGKF---YSLP 218

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            SP+   + L+  G ++ F  A  +R+       QPEFT ++   +      + +    +
Sbjct: 219 QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVEQTGIQRLVEGL 278

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           ++           S+        +    +T AEA A Y   D   T       D
Sbjct: 279 LQY----------SWPGDKDPLVTPFPSMTFAEALATY-GTDKPDTRFGMKIVD 321


>gi|298291120|ref|YP_003693059.1| aspartyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296927631|gb|ADH88440.1| aspartyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 590

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 63/211 (29%), Gaps = 30/211 (14%)

Query: 4   IPSQPWWN----RDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +     +   R      RR  L    + R  I  ++R       F E  +  L
Sbjct: 110 LPLPVFGDVEYPEETRLRYRFLDLRREKLHKNIMTRGAIIDAMRRRMKGQGFFEFQTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     +     K   L  +P+   + ++ +G ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRLH--PGKFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +              +  A E     +F               
Sbjct: 225 PRADRLPGEFYQLDLEMSFV--------EQEDVFAAVEPVITGVFEEFADGKPVTKNWPR 276

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           I  A +  +Y   D     +  +  D    +
Sbjct: 277 IPYAVSMQKY-GTDKPDLRNPIEMQDVSEHF 306



 Score = 79.3 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 51/150 (34%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E    I+        P  +  L  +   DP   K 
Sbjct: 416 EELNLVDHDRFELAWIVDFPFYEWSEDEKKIDFSHNPFSMP--QGGLDALNGQDPLTIKA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           F+        CN   E+     + HR E  ++  +    +   + E F           P
Sbjct: 474 FQY----DIACNGY-EIASGGIRNHRPEAMVKAFELAGYDEQEVVERFGGLYRAFQYGAP 528

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR+VML+ G  N+ E+   P 
Sbjct: 529 PHGGMAAGVDRIVMLLCGTTNLREISIFPM 558


>gi|241203986|ref|YP_002975082.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857876|gb|ACS55543.1| aspartyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 596

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 62/196 (31%), Gaps = 29/196 (14%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    +KR  + S++R       F E  +  L 
Sbjct: 111 PLPIFGEPDYPEDVRLKYRFLDLRRETLHKNIVKRTQVISAMRREMGNVGFTEYTTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRIH---PGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +  + E +                  IF           E   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVTQEDVWDTMG--------PLMTGIFEEFAEGKPVTKEWPR 276

Query: 168 ITVAEAFARYANIDLG 183
           I    A  +Y +    
Sbjct: 277 IPYDVAIRKYGSDKPD 292



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 47/163 (28%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +          I      E  E    ++        P            
Sbjct: 413 EARTKAGEELNLVDRDRFELCWIVDFPFFEWSEEEKKVDFAHNPFSMPQGGLEALQSQDP 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 +++      E+ +       P       E  +   +K+      +++ F     
Sbjct: 473 LTIKAFQYDAVCNGFEIASGSIRNQSP-------ETMVAAFEKVGLSQQDVEDRFGGLYR 525

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G A G DR++ML+ GA N+ E+   P +Q  Q+
Sbjct: 526 AFQYGAPPHGGAAFGIDRIIMLLVGAKNLREISLFPMNQQAQD 568


>gi|325973220|ref|YP_004250284.1| aspartyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651822|gb|ADX97904.1| aspartyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 543

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 64/200 (32%), Gaps = 7/200 (3%)

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
           + KI   Q  +       +    +E F  Y       + D  +   R      A    I+
Sbjct: 335 HSKIIEGQYDDWMISFSEKLNNHSEEF--YLFYICCNSGDKRESLLRMGRIRTAIIKQIK 392

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
               +    +         E +L     T    +  P     +        +  ++L   
Sbjct: 393 NREWENNFSLVWITDWPYFEESLEGKLVTSHHPFTLPTKDSLSKDNLLDWKSHGYDLVLN 452

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGF 326
            +E+ +    + +   Q   F       ++I  E       FL  L   +P   GIA+G+
Sbjct: 453 GVEIASGGQRIYNSDLQAKIFSILGYSSEEINQE----FGWFLEALNYGVPPHLGIAIGW 508

Query: 327 DRLVMLVTGANNINEVIWTP 346
           DRL+  +    +I EVI  P
Sbjct: 509 DRLMSELLNLKSIREVIAFP 528



 Score = 70.8 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 98/301 (32%), Gaps = 38/301 (12%)

Query: 15  HYRRRPFLLKRNMIQSSLR----------EYFVENQFIEIDSMSLQ-YSPGNETHIRAFS 63
             + R   L+R+ + +++            Y     F EI +  L   S         F 
Sbjct: 114 RMKYRYLDLRRSALHNNIEFCSKAKFIASSYLHILNFREITTPILSFPSREGA---ETFK 170

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           TE  +   + +   L  SP+   + L+ AG EK F FA ++R  +     Q EF+ L+  
Sbjct: 171 TEENVN--VNRSFTLAQSPQIYKQLLMIAGFEKYFQFATSFRAEKMREDRQYEFSQLDIE 228

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +  + E+L      +I    +   +  F               I+  EAF +Y   D  
Sbjct: 229 MSFSTQEKLFAIIEKLIISLIKKLVKSDFPD--------LPFRRISFQEAFEKY-GTDKP 279

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP---NLGINCCTILDR 240
               +P   D    + + Q     V        +        IE     +G +   I   
Sbjct: 280 DLRFSPYIVDLFSSFDKKQ-----VLPTQYCLSLLVERKTINIEELYSEVGRDFKYIKKS 334

Query: 241 YPAPES-----ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           +           + +        ++ F L+       +  + LL     R    K+++ +
Sbjct: 335 HSKIIEGQYDDWMISFSEKLNNHSEEFYLFYICCNSGDKRESLLRMGRIRTAIIKQIKNR 394

Query: 296 K 296
           +
Sbjct: 395 E 395


>gi|126733315|ref|ZP_01749062.1| aspartyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126716181|gb|EBA13045.1| aspartyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 617

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 63/198 (31%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ + +S+R    ++ F E  +  +   SP      R F     +    
Sbjct: 134 RREAMQDNMKLRSDVVASMRRRMWDSGFREYQTPIITASSPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +    +
Sbjct: 188 PGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVEQQ 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      +I    E         Q      + +      ++       I +    ++  
Sbjct: 248 DVFDTIQPVITGIFEEFGGGRKVDQTWEQISYRDAALWYGSDKPDLRNPIKMQVVSEHFA 307

Query: 191 QPDRHLLYLQAQQAGIRV 208
                +     +Q G  V
Sbjct: 308 GSGFAIFAKLLEQEGTEV 325



 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 56/156 (35%), Gaps = 12/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            + G+   +   ++ I    + E+ E    I+        P            DP     
Sbjct: 444 DELGLTDQNRFAFAWIVDFPIYEQDEETGKIDFEHNPFSMPQ---GGMAALDGDPLKV-- 498

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
             L       CN   EL+    + HR E   +  +        +++ F   +       P
Sbjct: 499 --LGYQYDLACNGY-ELVSGAIRNHRPEIMFKAFELAGYGKDEVEKRFGGMVNAFQYGAP 555

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G A G DR+VML+  A+NI EVI  P +Q  ++
Sbjct: 556 PHGGCAAGIDRIVMLLADASNIREVIMFPMNQRAED 591


>gi|260428921|ref|ZP_05782898.1| aspartyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260419544|gb|EEX12797.1| aspartyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 628

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 52/155 (33%), Gaps = 10/155 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+   +   ++ I    + EK E    I+        P            DP   K 
Sbjct: 456 EELGLTEKNRFAFAWIVDFPIYEKDEETGAIDFEHNPFSMPQ---GGMEALEGDPLAVKG 512

Query: 262 FE--LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
           F+  L     EL +       P      FE          +E                P 
Sbjct: 513 FQYDLACNGYELVSGAIRNHKPDVMLKAFE----LAGYGEDEVKKRFAGLYTAFQYGAPP 568

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G A G DR+VML+ G +NI EVI  P +Q  ++
Sbjct: 569 HGGCAAGIDRIVMLLAGTSNIREVIMFPMNQRAED 603



 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 70/211 (33%), Gaps = 28/211 (13%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +++        YR    RR  + +    R+ + +S+R    +  F E  +  +
Sbjct: 110 LPLMVFGDQEYPEETRLRYRYLDLRREEMQRSMTLRSDVVASMRRRMWDKGFREYQTPII 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     +     K   L  +P+   + ++ +G +K F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRLH--PGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P +F  L+   +  + + +      +I    E            +         
Sbjct: 225 PRADRSPTDFYQLDLEMSFVTQQDVFDTVSPVIAGVFEEFGGGASVDDPAS------WPQ 278

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           I   EA  +Y   D     +  +  D    +
Sbjct: 279 IPYKEAALKY-GTDKPDLRNPIEMQDVSEHF 308


>gi|115525278|ref|YP_782189.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|122295642|sp|Q07LH5|SYD_RHOP5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|115519225|gb|ABJ07209.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 590

 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 61/187 (32%), Gaps = 16/187 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R  I  S+R+   E  F E  +  L   SP      R F     I    
Sbjct: 134 RREKLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEG---ARDFLVPSRIH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            +   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +  +   
Sbjct: 189 GRFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVEMSFIT--- 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
                   +  A E     +F          S    I  AEA  +Y   D     +  + 
Sbjct: 246 -----QEDVFAAMEPVITGVFEEFAKGKRVNSVWPRIPFAEAMQKY-GSDKPDLRNPIEM 299

Query: 192 PDRHLLY 198
            D    +
Sbjct: 300 QDVSEHF 306



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + +    + E  E +  ++        P                  +
Sbjct: 416 EELNLVDKEQFALAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGMEALVTQDPLNIKAFQ 475

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQ 318
           +++     E+ +       P      FE         Y E   +D             P 
Sbjct: 476 YDITCNGFEIASGGIRNHRPEAMVKAFEI------AGYGEQEVVDRFGGMYRAFQYGAPP 529

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G+A G DR+VML+ G NN+ E+   P +Q  ++
Sbjct: 530 HGGMAAGVDRIVMLLCGTNNLREISLFPMNQRAED 564


>gi|220922152|ref|YP_002497453.1| aspartyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|254781741|sp|B8IUT2|SYD_METNO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|219946758|gb|ACL57150.1| aspartyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 604

 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 68/207 (32%), Gaps = 32/207 (15%)

Query: 4   IPSQPWWN----RDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +     +   R R            ++KR  I  SLR    E  F E  +  L
Sbjct: 110 LPMPVFGDLDYPEETRLRYRFLDLRREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     +        Y L  +P+   +  + AG ++ F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRLH---PGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P EF  L+   +  + E + +    ++R   E         Q+          
Sbjct: 224 DARADRSPGEFYQLDIEMSFVTQEDVFQAVEPVLRGVFEEFADGWRVTQS--------FP 275

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPD 193
            I  AEA  +Y  +D     +     D
Sbjct: 276 RIPYAEAMLKY-GVDKPDLRNPLLIVD 301



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 52/164 (31%), Gaps = 21/164 (12%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPADPR--- 257
              G+       +  I    + E  E    I+        P     A   + PAD     
Sbjct: 422 DDLGLSDKDQFAFCWITDFPMYEWNEDEKRIDFSHNPFSMPNYDHKAFLALDPADADTIL 481

Query: 258 --FTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDF 309
                ++++    IEL +       P      F         +++K         +    
Sbjct: 482 GIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGRDVLEQKFGGMLNALRM---- 537

Query: 310 LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  P   GIA G DR+VML+    NI EV+  P +Q  ++
Sbjct: 538 -----GAPPHGGIAPGVDRIVMLLCHEPNIREVVLFPMNQRAED 576


>gi|238501880|ref|XP_002382174.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           flavus NRRL3357]
 gi|220692411|gb|EED48758.1| cytoplasmic asparaginyl-tRNA synthetase, putative [Aspergillus
           flavus NRRL3357]
          Length = 612

 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 96/319 (30%), Gaps = 49/319 (15%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
           +    Y  R            +  R     + R+ F EN+ +E+   ++      G  T 
Sbjct: 239 DPQTLYDNRHLVLRGETASAVMKVRAATLRAFRKVFEENRMLEVTPPAMVQTQVEGGST- 297

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L   D+  +  YL  S +   +  L +    +FC   ++R  +     H  E+
Sbjct: 298 -------LFKFDYYGENAYLTQSSQLYLETCLPS-LGDVFCVCPSFRAEKSLTRRHLSEY 349

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T +E      ++  L+     +I    E+   +  +   +N      P++   +  F R 
Sbjct: 350 THIEAELDFITFTDLLDHLEAVICRVIELILAEPETAAFINQLN---PDFKPPSRPFRRM 406

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
              D    L   + P+                    + D  +     K+     IN    
Sbjct: 407 KYSDAIQWLIEHEIPNEE-------------GKPHQFGDDIAEAAERKM--TDIINQPIF 451

Query: 238 LDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           L  +PA   +      P D R T+  ++    +         +D  +     E     K 
Sbjct: 452 LTHFPAEIKAFYMKKDPEDRRVTESVDVLMPGVGEIVGGSMRMDDWD-----ELMGAYKH 506

Query: 297 KIYNETYPI---DEDFLAC 312
           +  + +      D+     
Sbjct: 507 EGMDPSPYYWYTDQRKYDA 525


>gi|167574466|ref|ZP_02367340.1| aspartyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 226

 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 56/166 (33%), Gaps = 13/166 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP----APESALAN 250
            L    A +  +       +  I    + E  E    I+ C      P        A   
Sbjct: 37  ELRQHLATKLDLIAKQRFEFCWITDFPMYEWAEKEQRIDFCHNPFSLPQGGFEALEAAVT 96

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED-- 308
           +         ++++    IEL +       P      FE         Y      D+   
Sbjct: 97  VEQQLALKAYQYDIVCNGIELSSGAVRNHVPEIMYKAFEI------AGYRPADLEDKFGG 150

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            L  L    P   GIA G DR+VML+ GA+N+ +V+  P +Q  ++
Sbjct: 151 MLRALQFGAPPHGGIAPGIDRIVMLLAGASNLRDVVMFPMNQQGED 196


>gi|90419528|ref|ZP_01227438.1| aspartyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336465|gb|EAS50206.1| aspartyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 595

 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 71/235 (30%), Gaps = 33/235 (14%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L    ++R  I S +R    +  F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRETLHKNMMRRTQIVSKMRTLMGDAGFFEFQTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     + +       L  +P+   + ++ +G ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRLHN--GMFYALPQAPQQYKQLIMMSGFDRYFQIAPCFRDED 224

Query: 109 QG-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                   EF  L+   +              I    E   + +F               
Sbjct: 225 PRADRFYGEFYQLDVEMSFV--------EQEDILSTMEPVIRDVFEAFADGKPVSQSFRR 276

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL 222
           I  AE+  +Y         D  +  +   +      +G +V  +    D    + 
Sbjct: 277 IPYAESMRKYG----SDKPDLRNPIEMQAVTEHFAGSGFKVFANMIAGDPAVEVW 327



 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 44/153 (28%), Gaps = 17/153 (11%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I      E  E    I+        P                  +
Sbjct: 420 EELNLVDRDRFELAWIIDFPFYEWQEEEKKIDFAHNPFSMPQGGMEALEGEEPLKLKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL-T 314
           +++     E+ +       P      FE      + ++E+                    
Sbjct: 480 YDIVCNGFEIASGGIRNHLPETMVKAFEIAGYSKETVEERFGG----------LYRAFQY 529

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             P   G+A G DR+VML+ GA N+ E+   P 
Sbjct: 530 GAPPHGGMAAGVDRIVMLLCGAKNLREIAMFPM 562


>gi|227821517|ref|YP_002825487.1| aspartyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|254781746|sp|C3M9G8|SYD_RHISN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|227340516|gb|ACP24734.1| aspartyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 595

 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 21/157 (13%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    +KR  + S++R    +  F E  +  L 
Sbjct: 111 PLPVFGEPDYPEDVRLKYRFLDLRRETLHRNIVKRTEVISAMRRGMSDIGFTEYTTPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             SP      R F     I        Y L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 171 ASSPEG---ARDFLVPSRIH---PGTFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
                 P EF  L+   +    E +      +IR   
Sbjct: 225 PRADRLPGEFYQLDLEMSFVEQEDVWDTMEPMIRAIF 261



 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 11/157 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +          I      E  E    ++        P       +    
Sbjct: 413 EARTRAGEELNLVDRDRFELCWIVDFPFYEWNEDEKRVDFAHNPFSMPQGGLKALSGDDL 472

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 ++++     E+ +       P       E  ++  + +      ++E F     
Sbjct: 473 LSIKAFQYDMVCNGFEIASGSIRNQSP-------ELMVKAFENVGLSQADVEEQFGGLYR 525

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 P   G+A G DR+VML+ GA N+ E+   P 
Sbjct: 526 AFQYGAPPHGGMAFGIDRIVMLIVGAKNLREISLFPM 562


>gi|157868974|ref|XP_001683039.1| aspartyl-trna synthetase [Leishmania major strain Friedlin]
 gi|68223922|emb|CAJ04412.1| putative aspartyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 641

 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSL----REYFVENQFIEIDSMS 48
            +P  P+ + +     R            ++  + + S+L    R   +   FIE+ +  
Sbjct: 224 PLPF-PYRDTNARLDTRLNHRVMDLRTEKMIAASRLVSALGQSFRNELLARDFIEVHTPK 282

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L  +  +E     F       D+  +  YL  SP+   + ++     ++F     +R   
Sbjct: 283 LLGAA-SEGGSNVFRV-----DYFERKAYLAQSPQLHKQMMVMGDAMRVFEVGPVFRAEN 336

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
                H  EF  L+     +     + D +  + CA      +          
Sbjct: 337 SLTHRHLTEFVGLDGEMVIKDSHTEVLDVLEPVMCAVLAHLTQQHGNLIDALW 389



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 55/140 (39%), Gaps = 23/140 (16%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP----RFTKRFELYACNIELCN 273
             R L + I+   G++   ++D +P+       + P DP      T+ +++Y    E+C+
Sbjct: 510 QERRLGQLIKERYGVDL-YVIDSFPSSARPFYTM-PVDPSMPDGPTRSYDMYLRGEEICS 567

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE----DFLACL-TEMPQSSGIAMGFDR 328
               +     Q    E+ +  KK        +D+    D++           G  +G +R
Sbjct: 568 GAQRVH----QIELLEQRLSAKK--------VDKVSVKDYVDSFRYGAWPHGGFGLGLER 615

Query: 329 LVMLVTGANNINEVIWTPFS 348
           + +   G ++I +V   P  
Sbjct: 616 IALFFLGLDDIRQVSLFPRD 635


>gi|260466879|ref|ZP_05813063.1| aspartyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259029381|gb|EEW30673.1| aspartyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 598

 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 69/224 (30%), Gaps = 24/224 (10%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L    + R  I + +R+   +  F E  +  L
Sbjct: 112 LPLPVFGEPDYPEDIRLKYRFLDLRRDTLHKNIVARTKIIAEMRKRMTDVGFTEFSTPIL 171

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     I        Y L  +P+   + ++ +G ++ F  A  +R+ 
Sbjct: 172 TASSPEG---ARDFLVPSRIH---PGTFYALPQAPQQYKQLIMVSGFDRYFQIAPCFRDE 225

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEP 165
           +      P EF  L+   +    + ++     ++R   E  AN K  +            
Sbjct: 226 DPRADRLPGEFYQLDLEMSFVEQDDVLSTMEPVMRGVFETFANGKPVTQTFQRIPYDVAM 285

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                 +   R        +    D   +    + A      V 
Sbjct: 286 RKYGSDKPDLRNPIEMQAVSDHFRDSGFKVFANILANDPKAEVW 329



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 77/316 (24%), Gaps = 23/316 (7%)

Query: 47  MSLQYSPGNETHIRAFS-TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
             ++       + +  + T   I   +    Y    P+      + A  +          
Sbjct: 257 PVMRGVFETFANGKPVTQTFQRIPYDVAMRKYGSDKPDLRNPIEMQAVSDHFRDSGFKVF 316

Query: 106 NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
                   + E   +   +   S     +                 +  +          
Sbjct: 317 ANILANDPKAEVWGIPA-KTGGSRAFCDRMNSWAQGEGQPGLGYIFWRKEGDKLEGAGPL 375

Query: 166 EYITVAEAFA----RYANIDLGTTLDNPDQPDRHLLYLQA------QQAGIRVAHDDTWS 215
                 E       +    D          P + + +  A      ++  +         
Sbjct: 376 AKNIGEERTEAIRLQLGLADGDAAFFVAGDPKKFVSFAGAARTRAGEELNLVDRERFELC 435

Query: 216 DIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNAC 275
            I      E  E    I+        P       N          ++++     E+ +  
Sbjct: 436 WIVDFPFFEWNEEEKKIDFAHNPFSMPQGGIDALNGEDLLGIKAFQYDMVCNGFEIASGG 495

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQSSGIAMGFDRLVM 331
                P       E  ++  + +  +   ++E F           P   G+A G DR+VM
Sbjct: 496 IRNHLP-------ETMVKAFETVGLDRATVEERFGGLYRAFQYGAPPHGGMAAGVDRVVM 548

Query: 332 LVTGANNINEVIWTPF 347
           L+ GA N+ E+   P 
Sbjct: 549 LLVGAKNLREITMFPM 564


>gi|13476902|ref|NP_108471.1| aspartyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|24212416|sp|Q983E9|SYD_RHILO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|14027663|dbj|BAB53932.1| aspartate-tRNA ligase [Mesorhizobium loti MAFF303099]
          Length = 596

 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 70/224 (31%), Gaps = 24/224 (10%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L    + R  I + +R+   +  F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRDTLHKNIVARTKIIAEMRKRMGDVGFTEFSTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     I        Y L  +P+   + ++ +G ++ F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRIH---PGTFYALPQAPQQYKQLIMVSGFDRYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEV-ANQKIFSFQNVNCNPFSEP 165
           +      P EF  L+   +    + ++     ++R   E  AN K  + +          
Sbjct: 224 DPRADRLPGEFYQLDLEMSFVEQDDVLNTMEPVLRGVFETFANGKPVTQKFQRIPYDVAM 283

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
                 +   R        +    D   +    + A      V 
Sbjct: 284 RKYGSDKPDLRNPIEMQAVSDHFRDSGFKVFANILANDPKAEVW 327



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 47/150 (31%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +          I      E  E    I+        P       N          +
Sbjct: 420 EELNLVDRERFELCWIVDFPFFEWNEEEKKIDFAHNPFSMPQGGIDALNGEDLLGIKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           +++     E+ +       P       E  ++  + +  +   ++E F           P
Sbjct: 480 YDMVCNGFEIASGGIRNHLP-------ETMVKAFETVGLDRATVEERFGGLYRAFQYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR+VML+ GA N+ EV   P 
Sbjct: 533 PHGGMAAGIDRVVMLLVGAKNLREVTMFPM 562


>gi|312139537|ref|YP_004006873.1| aspartate-tRNA ligase asps [Rhodococcus equi 103S]
 gi|325672579|ref|ZP_08152275.1| aspartate--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|311888876|emb|CBH48189.1| aspartate-tRNA ligase AspS [Rhodococcus equi 103S]
 gi|325556456|gb|EGD26122.1| aspartate--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 593

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 35/106 (33%), Gaps = 5/106 (4%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P PES               +++     E+      +     Q   F+         + E
Sbjct: 454 PKPESIDTFDTDPGKALAYAYDIVCNGNEIGGGSIRIHRKDIQERVFKVMGIS----HEE 509

Query: 302 TYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
                   L       P   GIA G+DR+  L+ G ++I EVI  P
Sbjct: 510 AEEKFGFLLDAFAFGAPPHGGIAFGWDRITALLAGVDSIREVIAFP 555



 Score = 78.5 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 32/201 (15%)

Query: 13  DFHYRRRPFLLKRNMIQSSLREYFVE------------NQFIEIDSMSLQ-YSPGNETHI 59
           +   + R   L+R     ++R                 ++F+E+++ +L   +P      
Sbjct: 118 EARLKYRYLDLRREGPGRAIR--LRSKANAAARAVLAHHEFVEVETPTLTRSTPEGA--- 172

Query: 60  RAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           R F     +Q       Y L  SP+   + L+  G E+ +  A  +R+ +     QPEFT
Sbjct: 173 RDFLVPARLQ---PGSFYALPQSPQLFKQLLMVGGIERYYQIARCYRDEDFRADRQPEFT 229

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            L+   +  + E ++     I+    ++   +I +              +T AEA  R+ 
Sbjct: 230 QLDIEMSFVTQEDVILLAEEILHAVWKLIGHEIST----------PIARMTYAEAMRRFG 279

Query: 179 NIDLGTTLDNPDQPDRHLLYL 199
           +       D            
Sbjct: 280 SDKPDLRFDIELVECMDFFKD 300


>gi|294943905|ref|XP_002784004.1| aspartate--tRNA ligase, putative [Perkinsus marinus ATCC 50983]
 gi|239897008|gb|EER15800.1| aspartate--tRNA ligase, putative [Perkinsus marinus ATCC 50983]
          Length = 366

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 47/152 (30%), Gaps = 17/152 (11%)

Query: 13  DFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           D     R            L  ++ +    RE+ ++   +EI +  L  +  +E     F
Sbjct: 213 DTRLDNRVIDLRTKANQAILRVQSGVSMLFREFLIQKGLVEIHTPKLLGAA-SEGGADVF 271

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
             +   ++      YL  SP+   +  L      +F     +R  +     H  EF  L+
Sbjct: 272 KVQYFERNA-----YLAQSPQLYKQMALMTDLPGVFEIGPVFRAEKSLTFRHMTEFVGLD 326

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFS 153
                      + D ++           + FS
Sbjct: 327 MEMRFADNYHEVLDVIDGTFDHIFHGLNERFS 358


>gi|256002012|gb|ACU52330.1| lysyl-tRNA synthetase [Chlamydia trachomatis]
          Length = 192

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 9/173 (5%)

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
                        +  +    +T+ E+ + Y  +D+    D+  +          ++  +
Sbjct: 26  VQYSHLKSGPQVVDFKAPWIRMTMKESISAYGGVDVDLHADHELRKILETQTSLPEKTYV 85

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA-DPRFTKRFELY 265
             +  +  + +F  ++ +K      +     +   P   + L     + D    +RFE +
Sbjct: 86  HASRGELIALLFDELVCDK------LIAPHHITDRPLETTPLCKTLRSGDETLVERFESF 139

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACL-TEM 316
               ELCNA  EL DP++QR   E++M++K     +E +PIDE+FL  L   M
Sbjct: 140 CLGKELCNAYSELNDPLQQRKLLEEQMRKKALNPDSEYHPIDEEFLGALCQGM 192


>gi|92117639|ref|YP_577368.1| aspartyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|123083659|sp|Q1QLI9|SYD_NITHX RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|91800533|gb|ABE62908.1| aspartyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 590

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 15/167 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R  I  S+R+   E  F E  +  L   SP      R F     I    
Sbjct: 134 RREKLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEG---ARDFLVPSRIH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
                 + +  A E     +F               I  AE+  +Y 
Sbjct: 245 ----EQDDVFAAVEPVVTGVFEEFAKGKPVTKNWPRIPFAESLRKYG 287



 Score = 79.7 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 55/159 (34%), Gaps = 11/159 (6%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
              ++  +        + I    + E  E    ++        P  +  L  +   DP  
Sbjct: 413 KLGEELNVIDKDRFELAWIVDFPMYEYNEDEKKVDFSHNPFSMP--QGGLDALNNQDPLT 470

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-T 314
            K F+        CN   E+     + HR E  ++  +        + E F         
Sbjct: 471 IKAFQY----DITCNGY-EIASGGIRNHRPEAMVKAFEIAGYGENDVVERFGGMYRAFQY 525

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   G+A G DR+VML+ G  N+ E+   P +Q  ++
Sbjct: 526 GAPPHGGMAAGVDRVVMLLCGTTNLREISLFPMNQRAED 564


>gi|312379943|gb|EFR26079.1| hypothetical protein AND_08075 [Anopheles darlingi]
          Length = 281

 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 8/86 (9%)

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           ++L    +E+      +     QR         +  +  E   +    L  L +  P   
Sbjct: 173 YDLVWNGVEIGGGSIRIHRSELQRRVL------RDVLNIEHDHL-GHLLDALDSGCPPHG 225

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTP 346
           G A+G DR V L+  A +I +VI  P
Sbjct: 226 GFAIGLDRYVSLLCSAASIRDVIAFP 251


>gi|326201553|ref|ZP_08191424.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988153|gb|EGD48978.1| aspartyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 582

 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + + +  ++ R+ + S LR+   +  F+EI +  L   SP      R +        + 
Sbjct: 134 RNKKVKDNIIFRSEVISFLRQKMTDMGFLEIQTPILCASSPEG---ARDYIVPSRK--YK 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G +K F  A  +R+ +      P EF  L++  +  + E 
Sbjct: 189 GKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDFEMSFATQED 248

Query: 132 LMKDCMNII 140
           + +    ++
Sbjct: 249 VFRTGEEVL 257



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 16/217 (7%)

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ---Q 203
                 +       P  +     +    A+ A ++ G T+      +     L  Q   +
Sbjct: 350 LGYLEVNDDMTYKGPIDKFIPDDMKGEIAQIAGLNQGDTIFFIADTEDRAALLAGQIRTE 409

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA----LANIYPADPRFT 259
            G R+   +  +  F  +    +          I    P           N         
Sbjct: 410 LGNRLDICEKNAYRFCFVNDFPMFEYDKEEEKIIFTHNPFSMPQGGLEALNSKNPLEILA 469

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET--YPIDEDFLACL-TEM 316
            ++++    IEL +      +       FE         Y E                  
Sbjct: 470 YQYDIVCNGIELSSGAVRNHNLDIMVRAFEI------AGYTEEDLQQKFGALYNAFQYGA 523

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P  +G+A G DR++ML+    NI EVI  P + + Q+
Sbjct: 524 PPHAGMAPGVDRMIMLLRNEENIREVIPFPLNGNAQD 560


>gi|207109199|ref|ZP_03243361.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 219

 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 7/145 (4%)

Query: 193 DRHLLYLQAQQAGIRVAH--DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           D+ ++     +  ++VA   D    D  + + +                 +P        
Sbjct: 79  DKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIE 138

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
               +      +++    +EL      +     Q+  FEK          E        L
Sbjct: 139 CEDMEEVEAHAYDVVLNGVELGGGSIRIHKEKMQKKVFEKINI----NEEEAQKKFGFLL 194

Query: 311 ACLT-EMPQSSGIAMGFDRLVMLVT 334
             L    P   G A+GFDRL+ML+T
Sbjct: 195 EALKFGAPPHGGFAIGFDRLIMLMT 219


>gi|313631232|gb|EFR98695.1| lysyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 42

 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 312 CLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
            L   +P + G+ +G DRLVML+T A +I +++  P  +  
Sbjct: 1   ALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKHR 41


>gi|170583906|ref|XP_001896781.1| hypothetical protein [Brugia malayi]
 gi|158595913|gb|EDP34374.1| conserved hypothetical protein [Brugia malayi]
          Length = 218

 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 44/141 (31%), Gaps = 12/141 (8%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDE 277
              +     E  L           P     L           + ++L    +EL      
Sbjct: 42  HFPLFSRNAEGRLESAHHPFTAPIPDDVPLLYEPNKLLSITGQHYDLVLNGVELGGGSIR 101

Query: 278 LLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGA 336
           + +   QRH           IY E+    E  +  L    P   G A+G DR V L+ G 
Sbjct: 102 IHNADVQRHVL-------STIYGESLEEMEHMIKALSYGAPPHGGFAIGLDRYVALLFGR 154

Query: 337 NN----INEVIWTPFSQSNQE 353
            B    I +VI  P S+   +
Sbjct: 155 GBSSVPIRDVIAFPKSKEGND 175


>gi|209885455|ref|YP_002289312.1| aspartyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|229470563|sp|B6JGJ7|SYD_OLICO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|209873651|gb|ACI93447.1| aspartyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 590

 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 64/198 (32%), Gaps = 7/198 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              R    ++ R  I  S+R    E  F E  +  L   SP      R F     I    
Sbjct: 134 RRDRLHQNIMTRGKIIDSMRARMKEVGFFEFQTPILTASSPEG---ARDFLVPSRIH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +  + E 
Sbjct: 189 GKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLEMSFVTQED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    E         +N    PF+E       +       + +    ++   
Sbjct: 249 VFAAMEPVITGVFEDFADGKPVTKNWPRIPFAEALRKYGTDKPDLRNPLIMQDVSEHFRG 308

Query: 192 PDRHLLYLQAQQAGIRVA 209
               +     +Q G  V 
Sbjct: 309 SGFKVFARMLEQEGNEVW 326



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 49/159 (30%), Gaps = 11/159 (6%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
              ++  +        + I    + E  E    ++        P                
Sbjct: 413 KLGEELNLIDKDRFELAWIVDFPMYEYNEDEKKVDFSHNPFSMPQGGLEALQTQDPLTIK 472

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-T 314
             ++++     E+ +       P      FE         Y E   I E F         
Sbjct: 473 AFQYDIACNGYEIASGGIRNHKPAAMVKAFEI------AGYGEETVI-ERFGGMYRAFQY 525

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   G+A G DR+VML+ G NN+ E+   P +Q  ++
Sbjct: 526 GAPPHGGMAAGVDRIVMLLCGTNNLREISLFPMNQRAED 564


>gi|296445173|ref|ZP_06887133.1| aspartyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257347|gb|EFH04414.1| aspartyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 592

 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 53/155 (34%), Gaps = 11/155 (7%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G+       +  I    + E  E +  I+        P           +      ++
Sbjct: 418 ELGLCKTDVFEFCWIVDFPMYEWNEDDKKIDFSHNPFSMPQGGLEALETRNSLDLLAFQY 477

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQ 318
           ++    IEL +       P   +  FE         Y E   + E F           P 
Sbjct: 478 DIVCNGIELSSGAIRNHRPDVMKKAFEI------AGYGEEVLL-EKFGGMYRAFQYGAPP 530

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             GIA G DR+VML+ G  N+ EV+  P +Q  ++
Sbjct: 531 HGGIAPGVDRIVMLLAGEENLREVVLFPMNQRAED 565



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 59/177 (33%), Gaps = 21/177 (11%)

Query: 4   IPSQPWWN----RDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +     +   R R            ++ R  +  SLR    E  F E  +  L
Sbjct: 110 LPLPVFGDLPYPEETRLRYRFLDLRREKLHANIMLRGAVIDSLRRRMKERGFFEFQTPIL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     +     K   L  +P+   + L+ AG ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRMH--PGKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
                 P EF  L+   +  + E +      ++R   E   +     Q      F +
Sbjct: 225 ARADRSPGEFYQLDVEMSFVTQEDVFAAVEPVLRGVFEEFGEGKPVTQVFPKIAFRD 281


>gi|254511105|ref|ZP_05123172.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534816|gb|EEE37804.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 591

 Score = 83.5 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 74/221 (33%), Gaps = 21/221 (9%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +++        YR    RR  + +    R+ + SS+R+   +  F E  +  +
Sbjct: 110 LPLMVFGDQEYPEETRLRYRYLDLRREAMQQNMTLRSDVVSSMRKRMWDQGFREYQTPII 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     +     K   L  +P+   + ++ +G +K F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRLH--PGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P +F  L+   +    + +      ++    E         Q+     + +   
Sbjct: 225 PRADRSPTDFYQLDLEMSFVEQQDVFDTIQPVLTGVFEEFGGGRKVDQDWPQISYKDAAL 284

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
              ++       I +    D+       +     +Q G  +
Sbjct: 285 WYGSDKPDLRNPIKMQVVSDHFRGSGFAIFAKLLEQDGTEI 325



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 49/153 (32%), Gaps = 6/153 (3%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +       ++ I    + E+ E    I+        P          P D R   +
Sbjct: 419 EELNLTEKDRFAFAWIVDFPIYEQDEETGAIDFEHNPFSMPQGGMEALQGDPLDVRG-YQ 477

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS 320
           ++L     EL +       P      FE          +E                P   
Sbjct: 478 YDLACNGYELVSGAIRNHKPEIMLKAFE----LAGYGEDEVKSRFGALFNAFHYGAPPHG 533

Query: 321 GIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           G A G DR+VML+    NI EV+  P +Q  ++
Sbjct: 534 GCAAGIDRIVMLLADEANIREVMMFPMNQRAED 566


>gi|331009250|gb|EGH89306.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 210

 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 27/66 (40%), Gaps = 13/66 (19%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SLQYSP 53
            LQ  P
Sbjct: 205 MLQTIP 210


>gi|312214535|emb|CBX94526.1| similar to aspartyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 683

 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 19/179 (10%)

Query: 7   QPWWNR-DFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFST 64
           +    R D   R   FL  R     + R+   EN  +E+++  L + +P      R F  
Sbjct: 215 RHLQLRADSRLRNNIFLRDRAG--RAARKVLAENNLVEVETPILFKSTPEG---AREFLV 269

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
               +        L  SP+   + L+A+G  K F FA  +R+ +     QPEFT L+   
Sbjct: 270 PTRQK---GLAYALPQSPQQYKQILMASGITKYFQFARCFRDEDLRADRQPEFTQLDMEM 326

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           A    E +M     ++              +    +  ++ + +T  EA + Y +    
Sbjct: 327 AFAGEEDVMNTIELLLA---------DLWDKMDLGSIPTKFQRMTYEEAMSSYGSDKPD 376



 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
              +++    +EL      + +   Q   F   ++ K     E        L  L +  P
Sbjct: 569 AAHYDIVLNGVELGGGSRRIHNAAVQEFIFRDILKMK----YERIEDFRHLLDVLRSGCP 624

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
             +GIA+G+DRL+ ++TG  ++ +VI  P  +S + E
Sbjct: 625 PHAGIALGWDRLMAVMTGTESVRDVIVFP--KSGKGE 659


>gi|84514462|ref|ZP_01001826.1| aspartyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84511513|gb|EAQ07966.1| aspartyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 592

 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 62/198 (31%), Gaps = 9/198 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ + +S+R    +  F E  +  +   SP      R F     +    
Sbjct: 134 RREAMQSNMKLRSDVVASMRRRMWDKGFREYQTPIITASSPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +  + +
Sbjct: 188 PGKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVTQQ 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      +I    E         Q      + +       +       I +    D+  
Sbjct: 248 DVFDTIQPVIGGVFEEFGGGRKVDQTWEQISYKDAALWYGTDKPDLRNPIKMQVVSDHFR 307

Query: 191 QPDRHLLYLQAQQAGIRV 208
                +     +Q G  +
Sbjct: 308 DSGFAIFAKLLEQDGTEI 325



 Score = 78.5 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 16/158 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            + G+       ++ I    + E+      I+        P       +  P   R   +
Sbjct: 419 DELGLTDKDRFAFAWIVDFPIYEQDAETGKIDFEHNPFSMPQGGMEALSGDPLAVRG-YQ 477

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTE 315
           ++L     EL +       P      FE       E++++       +            
Sbjct: 478 YDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQ---------YG 528

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+  A+NI EVI  P +Q  ++
Sbjct: 529 APPHGGCAAGIDRIVMLLADASNIREVIMFPMNQRAED 566


>gi|302833734|ref|XP_002948430.1| hypothetical protein VOLCADRAFT_58252 [Volvox carteri f.
           nagariensis]
 gi|300266117|gb|EFJ50305.1| hypothetical protein VOLCADRAFT_58252 [Volvox carteri f.
           nagariensis]
          Length = 601

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 4/64 (6%)

Query: 287 RFEKEMQEKKKIYN---ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           R + + +  + I     E        L C     P   G+A G DRL ML+ GA +I +V
Sbjct: 499 RRDIQQKVFELIGLNPAEAQSKFGYLLDCFEYGAPPHGGLAFGLDRLAMLLAGAPSIRDV 558

Query: 343 IWTP 346
           I  P
Sbjct: 559 IAFP 562



 Score = 59.3 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 10/124 (8%)

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+ AG ++ +  A  +R+ +     QPEFT L+   A      L     
Sbjct: 207 LPQSPQLFKQMLMVAGMDRYYQIARCFRDEDLRADRQPEFTQLDLEVAFMDDVALQGLME 266

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
            ++    +       +         +    ++ AEA  +Y   D        +  +   +
Sbjct: 267 QLVAQIFKQLLGVALT---------TPFRRMSYAEAMDKY-GSDKPDLRYGLEFVNLSEV 316

Query: 198 YLQA 201
             + 
Sbjct: 317 VREC 320


>gi|328543994|ref|YP_004304103.1| Aspartyl-tRNA synthetase [polymorphum gilvum SL003B-26A1]
 gi|326413738|gb|ADZ70801.1| Aspartyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 593

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +   +    + I    + E  E    +         P                  +
Sbjct: 419 EELDLIDQNRFELAWIVDFPMYEWDEDEKKVEFSHNPFSMPQGGLEGLETTDPLELNAYQ 478

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           +++     E+ +      +P   +  F          Y+ET  ++E F           P
Sbjct: 479 YDMVCNGYEIASGAIRNHNPEIMKKAFAI------AGYDET-VLEERFGGMYRAFQYGAP 531

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR+VML  GA N+ EV   P 
Sbjct: 532 PHGGMAFGIDRIVMLFVGAKNLREVTLFPM 561



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 29/193 (15%)

Query: 2   HQIPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSM 47
            ++P   +   +        YR    RR  L    + R  + + +R    E  F E  + 
Sbjct: 108 RELPLPVFGEPEYPEDVRLTYRFLDLRRETLHRNIMTRTKVIADIRRRMGEIGFAEFQTP 167

Query: 48  SLQ-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRN 106
            L   SP      R F     +     K   L  +P+   + L+ +G ++ F  A  +R+
Sbjct: 168 ILTASSPEG---ARDFLVPSRLH--PGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRD 222

Query: 107 GEQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
            +      P EF  L+   +  + + L      +IR   E  ++                
Sbjct: 223 EDPRADRLPGEFYQLDLEMSFVTQDDLFATMEPVIRGLFETFSE--------GKPVTQAF 274

Query: 166 EYITVAEAFARYA 178
             I  AEA A+Y 
Sbjct: 275 PRIPYAEAIAKYG 287


>gi|312074257|ref|XP_003139889.1| DRS-2 protein [Loa loa]
 gi|307764948|gb|EFO24182.1| DRS-2 protein [Loa loa]
          Length = 218

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 41/117 (35%), Gaps = 12/117 (10%)

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
           P     L +         + ++L    +EL      + +   QRH     +         
Sbjct: 62  PDDMPLLYDPNKLLSITGQHYDLVLNGVELGGGSIRIHNEDVQRHVLSTIL------GEP 115

Query: 302 TYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANN----INEVIWTPFSQSNQE 353
           +  + E  L  L    P   G A+G DR V L+ G  +    I +VI  P S+   +
Sbjct: 116 SEEL-EHMLKALSYGAPPHGGFAIGLDRYVALLVGRGDSSVPIRDVIAFPKSKEGND 171


>gi|254464021|ref|ZP_05077432.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206684929|gb|EDZ45411.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 594

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  ++ R+ +  S+R    +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKMQRNMVLRSNMIRSIRNRMWDIGFNEYQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +  + + 
Sbjct: 189 GKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPADFYQLDMEMSFVTQQD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           +      ++    E              +P +E   I+  ++   Y 
Sbjct: 249 VFDTIAPVMAGVFEEFGG------GRKVDPANEWPQISYKDSALWYG 289



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 16/158 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++ G+       ++ I    + EK E    I+        P          P   +   +
Sbjct: 421 EELGLIDKDRFAFAWIVDFPIYEKDEETGRIDFEHNPFSMPQGGMDALLSDPLAVKG-YQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTE 315
           ++L     EL +       P      FE       E++++       +            
Sbjct: 480 YDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVKKRFGGMVNAFQ---------YG 530

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 531 APPHGGCAAGIDRMVMLLADEANIREVIMFPMNQRAED 568


>gi|170740696|ref|YP_001769351.1| aspartyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|238687997|sp|B0UI66|SYD_METS4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|168194970|gb|ACA16917.1| aspartyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 604

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 18/183 (9%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++KR  I  SLR    E  F E  +  L   SP      R F     +    
Sbjct: 134 RREKLHANIMKRGAIIDSLRRRMREGGFFEFQTPILTASSPEG---ARDFLVPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   +  + AG ++ F  A  +R+ +      P EF  L+   +  + E
Sbjct: 188 PGKFYALPQAPQQFKQLTMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDIEMSFVTQE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            + +    ++R   E   +                  I  AEA  +Y  +D     +   
Sbjct: 248 DVFQAVEPVLRGVFEEFAEGWRVTGT--------FPRIPYAEAMLKY-GVDKPDLRNPLI 298

Query: 191 QPD 193
             D
Sbjct: 299 IVD 301



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 52/164 (31%), Gaps = 21/164 (12%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA-PESALANIYPADPR--- 257
              G+       +  I    + E  E    I+        P         + PAD     
Sbjct: 422 DDLGLTDKDQFAFCWITDFPMYEWNEDEKRIDFSHNPFSMPNYDHDGFLGLDPADAETIL 481

Query: 258 --FTKRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDF 309
                ++++    IEL +       P      F       + +++K         +    
Sbjct: 482 GIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFAIAGYGREVLEQKFGGMLNALRM---- 537

Query: 310 LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                  P   GIA G DR+VML+    NI EV+  P +Q  ++
Sbjct: 538 -----GAPPHGGIAPGVDRIVMLLCHEPNIREVVLFPMNQRAED 576


>gi|114762107|ref|ZP_01441575.1| aspartyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114545131|gb|EAU48134.1| aspartyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 593

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 55/161 (34%), Gaps = 22/161 (13%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +   +   ++ I    + EK E    I+        P      A     DP   K 
Sbjct: 421 EELNLTDKNRFAFAWIVDFPIYEKDEETGAIDFEHNPFSMPQ---GGAEALDGDPLAVKG 477

Query: 262 FE--LYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL 313
           F+  L     EL +       P      FE       E++++                  
Sbjct: 478 FQYDLACNGYELVSGAIRNHKPEVMLKAFEIAGYGEDEVKKRFAG----------LYTAF 527

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   G A G DR+VML+ G +NI EVI  P +Q  ++
Sbjct: 528 QYGAPPHGGCAAGIDRIVMLLAGTSNIREVIMFPMNQRAED 568



 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 62/187 (33%), Gaps = 14/187 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ + SS+R    +  F E  +  +   SP      R F     +    
Sbjct: 134 RREEMQRAMTLRSDVVSSMRRRMWDKGFREYQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +  S + 
Sbjct: 189 GKFYALPQAPQLFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDMEMSFVSQQD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    E   +          +  +    I   EA  +Y   D     +  + 
Sbjct: 249 VFDTISPVIAGIFEEFGE------GAKVDDPASWPQIPYHEAALKY-GTDKPDLRNPIEM 301

Query: 192 PDRHLLY 198
            D    +
Sbjct: 302 QDVSEHF 308


>gi|315051818|ref|XP_003175283.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311340598|gb|EFQ99800.1| aspartyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 632

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/367 (11%), Positives = 95/367 (25%), Gaps = 67/367 (18%)

Query: 41  FIEIDSMSL-QYSPGNETHI-----RAFSTE---LIIQDHIRKPLYLQTSPEFSCKKLLA 91
           F+E+++  L + +P            +F+T    +   + + K L+    PE    +  +
Sbjct: 238 FLEVETPILFKSTPEGAREFLLDMEMSFATAEDVMATTEALVKKLWASIMPEPLGPEPFS 297

Query: 92  AGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI 151
                 +     + + +       +   ++     +   ++       +       N   
Sbjct: 298 RMS--YYEAMGLYGSDKPDTRFDMKLRRVDQSLPPDFIGKIGSLDSPAVEAFLVRGNGCP 355

Query: 152 FSFQNVNCNPFSEPEYITVAEAFARYAN---IDLGTTLDNPDQPDRH------------- 195
                V     + PE     +          ID    +                      
Sbjct: 356 KETMRVLQGFMNTPEAKPFLDNPDGAPGTFVIDSSKPMTGLSAAGFEAAWGLETLFEPEH 415

Query: 196 --LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC----CTILDRYPAP----- 244
             LL+ Q ++            ++   +    +E              +  +P       
Sbjct: 416 GDLLFFQCRKDEPFSGGSIKAGELRLAVHQYLVEKGFYSPPVGFNFHWVTGFPLFSPSVE 475

Query: 245 ----------ESALANIY--------------PADPRFTKRFELYACNIELCNACDELLD 280
                      ++  + +                       ++L    +EL      +  
Sbjct: 476 TEPGQGGTAGIASTHHPFTAPRTAEDAALLLTDPTKAIADHYDLVVNGVELGGGSRRIHS 535

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNI 339
              Q       ++                L CL    P  +GIA+GFDRL+ ++ G  ++
Sbjct: 536 AAVQEFILRDILKV----PPSRLQSFSHLLECLRAGCPPHAGIALGFDRLIAVMRGTQSV 591

Query: 340 NEVIWTP 346
             VI  P
Sbjct: 592 RNVIAFP 598


>gi|209527076|ref|ZP_03275591.1| nucleic acid binding OB-fold tRNA/helicase-type [Arthrospira maxima
           CS-328]
 gi|209492504|gb|EDZ92844.1| nucleic acid binding OB-fold tRNA/helicase-type [Arthrospira maxima
           CS-328]
          Length = 267

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 21/135 (15%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAF----- 62
            H R R          RN   +++ ++F E  F+ I +  +  S       + +      
Sbjct: 122 AHLRSRTNTYGAVFRVRNACAAAVHQFFQERGFLWIHTPIITASDCEGAGELFSVTSLDL 181

Query: 63  --------STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                    T    QD   K  +L  S +    +++A     ++ F   +R        H
Sbjct: 182 NHLPLTETKTVDFSQDFFGKRAFLTVSGQLEA-EIMALAFGNVYTFGPTFRAENSNTSRH 240

Query: 114 QPEFTMLEWYRAHES 128
             EF M+E   A   
Sbjct: 241 LAEFWMIEPEMAFCD 255


>gi|260576552|ref|ZP_05844541.1| aspartyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021275|gb|EEW24582.1| aspartyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 592

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 54/184 (29%), Gaps = 12/184 (6%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHIRKPLY-LQ 79
           ++ R+ +  S+R+   +  F E  +  +   SP      R F     +        Y L 
Sbjct: 142 MMLRSNVVRSMRQRMWDQGFTEFQTPIITASSPEG---ARDFLVPSRLH---PGKFYALP 195

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAH---ESYEQLMKD 135
            +P+   + ++ AG ++ F  A  +R+ +      P +F  L+   +          ++ 
Sbjct: 196 QAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVEQADVFAAVQP 255

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            +  I             +  +      +       +        D+             
Sbjct: 256 VVQGIFEEFAPDKTVYADWPLIAYRDSLKWYGSDKPDLRNPIRMQDVSEHFRGSGFAIFA 315

Query: 196 LLYL 199
            L  
Sbjct: 316 KLLE 319



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQSSG 321
                 CN   EL+    + H+ E   +  +        +++ F   +       P   G
Sbjct: 477 YQYDLACNGY-ELISGGIRNHKPEIMFKAFELAGYPASEVEKRFGGMVKAFRYGAPPHGG 535

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 536 CAAGIDRIVMLLADEANIREVIMFPMNQRAED 567


>gi|300024344|ref|YP_003756955.1| aspartyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526165|gb|ADJ24634.1| aspartyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 603

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 72/230 (31%), Gaps = 35/230 (15%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  L    +KR  I  ++R+   +  F E  +  L
Sbjct: 115 LPVPVFGEPDYPEDLRLQYRFLDLRRETLHAIIMKRLEITRAIRKRMHDAGFNEFPTPIL 174

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     I        Y L  +P+   + L+ +G ++ F  A  +R+ 
Sbjct: 175 TASSPEG---ARDFLVPSRIH---EGKFYALPQAPQQYKQLLMVSGFDRYFQIAPCFRDE 228

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P EF  L+   +              +    E     +F          +   
Sbjct: 229 DPRADRLPGEFYQLDVEMSFV--------EQEDVFSTMEPVLTGLFEEFANGKPVTNNWP 280

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD 216
            I    A A+Y   D     +  +  D    +   + +G +V       D
Sbjct: 281 RIPYDTAIAKY-GSDKPDLRNPIEMQDVTEHF---RGSGFKVFAGMIEKD 326



 Score = 73.1 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 44/154 (28%), Gaps = 15/154 (9%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP----APESALANIYPADPR 257
           Q+  +        + I      E  E    I+        P        A          
Sbjct: 423 QELKLVKEDQYALAWIVDFPFYEWNEEEKKIDFSHNPFSMPQGGGEALDAATTNEDRLKL 482

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL---ACL- 313
              ++++     E+ +       P      F         +  E   +++ F        
Sbjct: 483 KAYQYDIVCNGYEIASGGIRNHKPEVMIKAFGI-----AGLGPE--VVEQRFGGLFRAFQ 535

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              P   G+A G +R+VML+TG   + EV   P 
Sbjct: 536 YGAPPHGGMAAGIERIVMLLTGGKTVREVALFPM 569


>gi|6166300|gb|AAF04770.1|AF104224_4 aspartyl-tRNA synthetase [Listeria monocytogenes]
          Length = 117

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 9/88 (10%)

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDFLACLT-EMPQ 318
           +++     E+      +     Q   F      +                +  L    P 
Sbjct: 2   YDIVLNGYEIGGGSLRIYKKEVQESMF------RALGFTDESAKEQFGFLMDALEYGTPP 55

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTP 346
             GIA+G DR+VM++ G NN+ + I  P
Sbjct: 56  HGGIALGLDRIVMILAGRNNLRDTIAFP 83


>gi|146276417|ref|YP_001166576.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166225381|sp|A4WPF7|SYD_RHOS5 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|145554658|gb|ABP69271.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 591

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 63/197 (31%), Gaps = 7/197 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ +  SLR    +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKLHANMMLRSNVVRSLRNRMWDAGFNEFQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ AG ++ F  A  +R+ +      P +F  L+   +    E 
Sbjct: 189 GKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDVEMSFVEQED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + +    +IR   E          +     + +      ++       I +    ++   
Sbjct: 249 VFRAVQPVIRGIFEEFGGGRRVDADWPRIAYRDAMLWYGSDKPDLRNPIKMQVVSEHFRG 308

Query: 192 PDRHLLYLQAQQAGIRV 208
               +     +  G  +
Sbjct: 309 SGFAIFAKLLENEGTEI 325



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQS 319
           L       CN   EL+    + H+ E   +  +        +++ F   +       P  
Sbjct: 474 LAYQYDLACNGY-ELISGGIRNHKPEIMFKAFELAGYPASEVEKRFGGMVKAFRYGAPPH 532

Query: 320 SGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 533 GGCAAGIDRIVMLLADEANIREVIMFPMNQRAED 566


>gi|163759181|ref|ZP_02166267.1| aspartyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162283585|gb|EDQ33870.1| aspartyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 595

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 66/195 (33%), Gaps = 27/195 (13%)

Query: 3   QIPS--QPWWNRDFHYR------RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ 50
            +P   +P +  D   +      RR  L    + R  + + +R+   +  F E  +  L 
Sbjct: 111 PLPVFGEPDYPEDVRLKYRFLDLRRETLHKNIVTRTKVIADMRKRMTDIGFAEYATPILT 170

Query: 51  -YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
             SP      R F     I     +   L  +P+   + L+ AG ++ F  A  +R+ + 
Sbjct: 171 ASSPEG---ARDFLVPSRIH--PGQFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDP 225

Query: 110 GCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                P EF  L+   +  + E +      ++R         +F           E   I
Sbjct: 226 RADRLPGEFYQLDLEMSFVTQEDVWDTMEPVMRG--------VFEEFAEGKPVTQEFRRI 277

Query: 169 TVAEAFARYANIDLG 183
              EA  +Y +    
Sbjct: 278 PYDEAVRKYGSDKPD 292



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 11/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +   +      I      E  E    +         P                  +
Sbjct: 420 EELNLVDENRFELCWIVDFPFYEWDEDAKKVEFAHNPFSMPQGGMEALETQDPLTLKAYQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P       E  ++  +K+      ++E F           P
Sbjct: 480 YDLVCNGFEIASGSIRNQSP-------ELMVKAFEKVGLSQADVEERFGGLYRAFQYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G+A G DR++ML+ GA N+ EV   P +Q  Q+
Sbjct: 533 PHGGMAAGVDRVIMLIVGAKNLREVALFPMNQQAQD 568


>gi|238479943|ref|NP_001154656.1| ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleotide
           binding [Arabidopsis thaliana]
 gi|332644140|gb|AEE77661.1| ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleotide
           binding protein [Arabidopsis thaliana]
          Length = 166

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           ++   +E   +DE F   L   +P + G  MG DR +ML+T + NI  V   
Sbjct: 72  RQSGDDEAMAMDETFCMALEYGLPPTGGWGMGIDRPLMLLTDSQNIK-VPLF 122


>gi|90423838|ref|YP_532208.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|123395033|sp|Q215P7|SYD_RHOPB RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|90105852|gb|ABD87889.1| aspartyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 590

 Score = 82.4 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 15/167 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R  I  S+R+   E  F E  +  L   SP      R F     I    
Sbjct: 134 RREKLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEG---ARDFLVPSRIH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            +   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +  +   
Sbjct: 189 GRFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVEMSFIT--- 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
                 + +  A E     +F               I  A++  +Y 
Sbjct: 246 -----QDDVFAAMEPVITGVFEDFAKGKPVTKSWPRIAYADSLKKYG 287



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I    + E  E +  ++        P                  +
Sbjct: 416 EELNLVDKERFELAWIVDFPMYEYNEDDKKVDFSHNPFSMPQGGMDALLNQDPLTIKAFQ 475

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACL-TEMPQ 318
           +++     E+ +       P      FE         Y E   +D             P 
Sbjct: 476 YDITCNGFEIASGGIRNHRPEAMVKAFEI------AGYGEQEVVDRFGGMYRAFQYGAPP 529

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G+A G DR+VML+ G NN+ E+   P +Q  ++
Sbjct: 530 HGGMAAGVDRIVMLLCGTNNLREISLFPMNQRAED 564


>gi|75675780|ref|YP_318201.1| aspartyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|97196752|sp|Q3SS92|SYD_NITWN RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|74420650|gb|ABA04849.1| aspartyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 590

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 56/167 (33%), Gaps = 19/167 (11%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
           RR  L    + R  I  S+R+   E  F E  +  L   SP      R F     I    
Sbjct: 134 RRENLHQNIMTRGAIVDSMRKRMKEQGFFEFQTPILTASSPEG---ARDFLVPSRIH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
                 + +  A E     +F               I  AE+  +Y 
Sbjct: 245 ----EQDDVFAAVEPVITGVFEEFAKGKPVTRNWPRIPFAESLRKYG 287



 Score = 78.5 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 57/156 (36%), Gaps = 11/156 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I    + E  E +  ++        P  +  L  +   DP   K 
Sbjct: 416 EELNLIDKDRFELAWIVDFPMYEYNEEDKKVDFSHNPFSMP--QGGLDALNTQDPLTIKA 473

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           F+        CN   E+     + HR E  ++  +        + E F           P
Sbjct: 474 FQY----DITCNGY-EIASGGIRNHRPEAMVKAFEIAGYGENDVVERFGGMYRAFQYGAP 528

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              G+A G DR+VML+ G NN+ E+   P +Q  ++
Sbjct: 529 PHGGMAAGVDRIVMLLCGTNNLREISLFPMNQRAED 564


>gi|323139674|ref|ZP_08074715.1| aspartyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322395053|gb|EFX97613.1| aspartyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 592

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 11/155 (7%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G+       +  I    + E  E +  I+        P                  ++
Sbjct: 418 ELGLSKKDVFEFCWIVDFPMYEWNEDDKKIDFSHNPFSMPQGGMEALEEKDPLDILAYQY 477

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMPQ 318
           ++    +EL +       P   +  FE         Y E   I E F           P 
Sbjct: 478 DIVCNGVELSSGAIRNHRPEIMKKAFEI------AGYGEDVLI-EKFGGMYRAFQYGAPP 530

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             GIA G DR+VML+    N+ EV   P +Q  ++
Sbjct: 531 HGGIAPGVDRIVMLLAEEENLREVTLFPMNQRAED 565



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 15/172 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R  I  S+R    +  F E  +  L   SP      R F     +    
Sbjct: 134 RREKLHNNIMLRGRIIDSIRTRMKQGGFFEFQTPILTASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ AG ++ F  A  +R+ +      P EF  L+   +  + E 
Sbjct: 189 GKFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVEMSFVTQED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +      ++R         +F           +   I   EA  +Y +    
Sbjct: 249 VFDSMEPVLRG--------VFEEFANGKAVTQKFPRIPFREAMLKYGSDKPD 292


>gi|307127751|ref|YP_003879782.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306484813|gb|ADM91682.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 227

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 9/111 (8%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
           + ++  W R    ++   L  RN I  +  E+F +N F++ DS  L  +   ++      
Sbjct: 124 MDNRHLWLRSR--KQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDS------ 175

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQ 114
           TEL   D+   P YL  S +   +    A   ++F F   +R  +      
Sbjct: 176 TELFETDYFGTPAYLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRPS 225


>gi|10639776|emb|CAC11748.1| asparagine--tRNA ligase related protein [Thermoplasma acidophilum]
          Length = 329

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/330 (16%), Positives = 106/330 (32%), Gaps = 60/330 (18%)

Query: 27  MIQSSLR----EYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
            +QSS+R    E+  E  FIE+    +      +             D+      L  S 
Sbjct: 42  KVQSSIRSITSEFLKERGFIEV-PPVIISVL-TDPLNHP--VFDPTIDYYGYKYSLTKSM 97

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGC----LHQPEFTMLEWYRAHESYEQLMKDCMN 138
               K LL    ++IF F+   R  E+       H  EFT L+      S +++M    +
Sbjct: 98  -IFHKHLLTKHFDRIFTFSPNIRLEEEDKVKTGRHLAEFTQLDLEMKGASRDEVMSLGED 156

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +I    +   +                      E   ++   D    L  P +P + + Y
Sbjct: 157 MIIDLFKKIKRSN--------------------EEDLKFFGRD----LRIPSKPFKRIAY 192

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           L A +          + + F  IL  +++          +   P  +    +        
Sbjct: 193 LDAYK---------QYGEDFEHILSSEMKE------PFWIIDIPLEKREFYDREDP---- 233

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKKIYNETYPIDEDFLA-CLTEM 316
           ++   L   ++       E L   E+ +   + + +  +K   E     + ++      +
Sbjct: 234 SRPGILVDMDLIYPEGFGEALSGGEREYELSRIIDRIHRKGQTEEQF--KWYIEFAKEGL 291

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             S+G  +G +RL   + G   I +    P
Sbjct: 292 MPSAGFGIGIERLTRFICGLERIEDAHPFP 321


>gi|302409574|ref|XP_003002621.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261358654|gb|EEY21082.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 599

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 5/89 (5%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
              ++L    +EL      +     Q   F   +Q  K             L  L    P
Sbjct: 484 ADHYDLVLNGVELGGGSRRIHVAAMQEFIFRDILQMTK----PKMAEFSHLLKALRAGCP 539

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +G A+GFDR   +++G++++ +VI  P
Sbjct: 540 PHAGFALGFDRFAAVLSGSSSVRDVIAFP 568



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 91/293 (31%), Gaps = 42/293 (14%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFST 64
           ++    R FH + +  L  R  +++SL +   +  ++++++ +L + +       R F  
Sbjct: 79  ARHLQLR-FHAKLKESLRFRAFLKASLGQTMSKLGYMDVETPTLFKSTSEG---AREFLV 134

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
                 H      L  SP+   + L+AAG    + FA  +R+ +     QPEFT ++  +
Sbjct: 135 PTRRAGHA---YALPQSPQQYKQVLMAAGLGGYYQFARCYRDEDHRADRQPEFTQMDLEK 191

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS--------------------- 163
           +  + E +  D    ++   +   ++     +                            
Sbjct: 192 SFATGETIQADVEAFMQATWDAMREEYNRKADDTSFIPHRKSAQSSDEPSGGEPVPYKDY 251

Query: 164 -----EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
                    +   E    Y     G+   +   P+R          G      D  + I 
Sbjct: 252 PAIATPFRRMKYQECMDLY-----GSDKPDLRIPNRIERVDTHLSPGFVSMITDLENPIV 306

Query: 219 SRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
              +    E          +  +      L   +  +P    +  +Y  +  L
Sbjct: 307 DAWVFRPHEDADRKEVHEFMQNF---LQNLHKSHSQNPDGAPQALMYDTSKPL 356


>gi|294893115|ref|XP_002774338.1| aspartyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239879676|gb|EER06154.1| aspartyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 257

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 56/145 (38%), Gaps = 11/145 (7%)

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFEL 264
           ++   D+       ++L   +      +   I+D++PA          P DP++T  +++
Sbjct: 116 VKHEEDEDIGTSDEKLLGRIMHDLYNTD-FYIIDKFPASVRPFYTMPDPVDPKWTNSYDI 174

Query: 265 YACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIA 323
           +    E+ +    + D            ++ +++  E   I + ++          +G  
Sbjct: 175 FIRGEEVTSGAQRIHDADML-------AEKAQRLGVELSTI-QPYVDAFKYGSYPHAGAG 226

Query: 324 MGFDRLVMLVTGANNINEVIWTPFS 348
           +G +R+VML  G  NI  V   P  
Sbjct: 227 VGLERVVMLFLGLPNIRLVSMFPRD 251


>gi|83952777|ref|ZP_00961507.1| aspartyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83835912|gb|EAP75211.1| aspartyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 594

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 49/155 (31%), Gaps = 10/155 (6%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT-- 259
           ++ G+       ++ I    + EK E    I+        P            DP     
Sbjct: 421 EELGLTDQDRFAFAWIVDFPIYEKDEETGEIDFEHNPFSMPQ---GGMAALDGDPLAVKG 477

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQ 318
            +++L     EL +       P      FE          +E                P 
Sbjct: 478 WQYDLACNGYELVSGAIRNHKPEIMLKAFE----LAGYGEDEVKSRFGALFNAFHYGAPP 533

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 534 HGGCAAGIDRIVMLLANQENIREVIMFPMNQRAED 568



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 71/211 (33%), Gaps = 28/211 (13%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +++        YR    RR  + +    R+ + +S+R    + +F E  +  +
Sbjct: 110 LPLLVFGDQEYPEETRLRYRYLDLRREAMQRNMTLRSDVVASIRRRMWDQKFREFQTPII 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     +     K   L  +P+   + ++ +G +K F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRLH--PGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P +F  L+   +    + +      +I    E              +   +   
Sbjct: 225 PRADRSPTDFYQLDLEMSFVEQQDVFDTVAPVIAGVFEEFGG------GRKVDAPGDWPQ 278

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           I  A A  +Y   D     +  +  D    +
Sbjct: 279 IPYASAMLKY-GTDKPDLRNPIEMQDVSEHF 308


>gi|89071136|ref|ZP_01158334.1| aspartyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043321|gb|EAR49544.1| aspartyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 592

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 71/221 (32%), Gaps = 21/221 (9%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +++        YR    RR  + K    R+ + +++R    +  F E  +  +
Sbjct: 110 LPLIVFGDQEYPEETRLRYRYLDLRREAMQKNMTLRSDVVAAMRRRMWDKGFREYQTPII 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     +     K   L  +P+   + L+ +G +K F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRLH--PGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P +F  L+   +    + +      ++    E         +      + +   
Sbjct: 225 PRADRSPTDFYQLDMEMSFVEQQDVFDTIQPVMTGVFEEFGGGRKVDEVWPQISYKDSAL 284

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
               +       I +    ++       +     +Q G  +
Sbjct: 285 WYGTDKPDLRNPIKMEVVSEHFAGSGFAIFAKLLEQDGTEI 325



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 16/158 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +       ++ I    + E+ E    ++        P       +  P +     +
Sbjct: 419 EELNLTDKERFAFAWIVDFPMYERDEETGAVDFSHNPFSMPQGGRGALDGDPLEV-LGYQ 477

Query: 262 FELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLTE 315
           ++L     EL +       P      FE       E++++       +            
Sbjct: 478 YDLACNGYELISGAIRNHKPEIMFKAFELAGYGEDEVRKRFGGMVNAFQ---------YG 528

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A+G DR+VML+    NI EVI  P +Q  ++
Sbjct: 529 APPHGGCAVGIDRVVMLLADETNIREVILFPMNQRAED 566


>gi|255262607|ref|ZP_05341949.1| aspartyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255104942|gb|EET47616.1| aspartyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 617

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 63/197 (31%), Gaps = 7/197 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  +  R+ + +S+R+   +  F E  +  +   SP      R F     +    
Sbjct: 134 RREKLQNNMKMRSDVVASMRKRMWDKGFREYQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +    + 
Sbjct: 189 GKFYALPQAPQQFKQLIMVSGYDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVEQQD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I+   E                + +      ++       I +    ++   
Sbjct: 249 VFDTIQPVIQGVFEEFGGGKKVDATWEQISYRDAALWYGSDKPDLRNPIKMQVVSEHFRG 308

Query: 192 PDRHLLYLQAQQAGIRV 208
               +     +  G  +
Sbjct: 309 SGFAIFAKLLENEGTEI 325



 Score = 78.5 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 53/159 (33%), Gaps = 12/159 (7%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
                 G+   +   ++ I    + E+ E    I+        P            DP  
Sbjct: 441 EIGDTLGLTDTNRYAFAWIVDFPIYERDEETGKIDFEHNPFSMPQ---GGMAALDGDPED 497

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-T 314
                L       CN   EL+    + HR E   +  +        +++ F   +     
Sbjct: 498 V----LGYQYDLACNGY-ELVSGAIRNHRPEIMFKAFEIAGYGKDEVEKRFGGMVNAFQY 552

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 553 GAPPHGGCAAGIDRIVMLLAEEANIREVIMFPMNQRAED 591


>gi|85717197|ref|ZP_01048154.1| aspartyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85695977|gb|EAQ33878.1| aspartyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 594

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 53/167 (31%), Gaps = 15/167 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                   ++ R  I  S+R    E  F E  +  L   SP      R F     I    
Sbjct: 134 RRESLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEG---ARDFLVPSRIH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G ++ F  A  +R+ +      P EF  L+   +      
Sbjct: 189 GKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
                 + +  A E     +F               I  A+A  +Y 
Sbjct: 245 ----EQDDVFAAVEPVITGVFEEFAKGKPVTRNWPRIPFADAVRKYG 287



 Score = 79.3 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 58/157 (36%), Gaps = 13/157 (8%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +        + I    + E  E +  ++        P  +  L  +   DP     
Sbjct: 420 EELNLIDKDRFELAWIVDFPMYEYNEEDKKVDFSHNPFSMP--QGGLDALNTQDPLTINA 477

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKK-KIYNETYPIDEDF---LACL-TEM 316
           F+        CN   E+     + HR E  ++  +   Y ET  + E F           
Sbjct: 478 FQY----DITCNGY-EIASGGIRNHRPEAMVKAFEIAGYGET-EVVERFGGMYRAFQYGA 531

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
           P   G+A G DR+VML+ G  N+ E+   P +Q  ++
Sbjct: 532 PPHGGMAAGVDRIVMLLCGTTNLREISLFPMNQQAED 568


>gi|213622455|ref|ZP_03375238.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 81

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L  L    P   G+A G DRL ML+TG +NI +VI  P
Sbjct: 7   FLLDALKYGTPPHVGLAFGLDRLTMLLTGTDNIRDVIAFP 46


>gi|322712664|gb|EFZ04237.1| aspartyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 567

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 104/350 (29%), Gaps = 52/350 (14%)

Query: 14  FHYR---RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD 70
            H R   ++     R  ++   R Y     F E +   L  +  +E     F        
Sbjct: 231 MHKRAPVQQAIADIRIEVKRLFRSYLDSRGFKEFEPPCLIGAA-SEGGGNVFR-----LA 284

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +  +  +L  SP+F  +  +A G E++F     +R        H  EFT L+     +  
Sbjct: 285 YFGEEAFLAQSPQFYKQFEIAGGRERVFSIGPVFRAENSNTPRHMTEFTGLDLEMEIKES 344

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              +   +  +  +      +            +E E +            + G  +   
Sbjct: 345 YTEVISTLEGVLLSIF----RGIQVLPPIERCANEIETVRAVYHSEPLLLPEPGKEVRLT 400

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
               + LL  +       V  D+  S    + L + +      +   ++D++P       
Sbjct: 401 FAEAQKLLREEGPPEFANVRDDEDMSTPQEKALGQVVRAKYKTD-FFVVDKFPETARPFY 459

Query: 250 NIYP-------ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                         R T  ++++    E+ +    + DP+E   R       + K  +  
Sbjct: 460 AKLDDAGTTVGDGVRVTNAYDMFLRGQEVLSGGQRIHDPVELEAR------IRSKGVDPK 513

Query: 303 YPIDEDFLACLT-------------EMPQSSGIAMGFDRLVMLVTGANNI 339
               +++LA                            DR+V  + G  ++
Sbjct: 514 SGGIKEYLATFQQVGVPPHGGGGIG-----------LDRVVAWILGLPSV 552


>gi|16082537|ref|NP_394082.1| asparagine synthetase A [Thermoplasma acidophilum DSM 1728]
          Length = 314

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/330 (16%), Positives = 106/330 (32%), Gaps = 60/330 (18%)

Query: 27  MIQSSLR----EYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
            +QSS+R    E+  E  FIE+    +      +             D+      L  S 
Sbjct: 27  KVQSSIRSITSEFLKERGFIEV-PPVIISVL-TDPLNHP--VFDPTIDYYGYKYSLTKSM 82

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQGC----LHQPEFTMLEWYRAHESYEQLMKDCMN 138
               K LL    ++IF F+   R  E+       H  EFT L+      S +++M    +
Sbjct: 83  -IFHKHLLTKHFDRIFTFSPNIRLEEEDKVKTGRHLAEFTQLDLEMKGASRDEVMSLGED 141

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           +I    +   +                      E   ++   D    L  P +P + + Y
Sbjct: 142 MIIDLFKKIKRSN--------------------EEDLKFFGRD----LRIPSKPFKRIAY 177

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           L A +          + + F  IL  +++          +   P  +    +        
Sbjct: 178 LDAYK---------QYGEDFEHILSSEMKE------PFWIIDIPLEKREFYDREDP---- 218

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKKIYNETYPIDEDFLA-CLTEM 316
           ++   L   ++       E L   E+ +   + + +  +K   E     + ++      +
Sbjct: 219 SRPGILVDMDLIYPEGFGEALSGGEREYELSRIIDRIHRKGQTEEQF--KWYIEFAKEGL 276

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             S+G  +G +RL   + G   I +    P
Sbjct: 277 MPSAGFGIGIERLTRFICGLERIEDAHPFP 306


>gi|291240797|ref|XP_002740304.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 700

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 11/156 (7%)

Query: 17  RRRPFLLKRNMIQSSLREYF-VENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRK 74
           + +  L  R+ I   +RE+    + F+E+++ ++ + +PG       F       +    
Sbjct: 183 KMQENLRLRSRIAMKMREFLCNHHGFVEVETPTMFKQTPGGSQE---FVIPTRHPERF-- 237

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE---WYRAHESYEQ 131
              L  SP+   + L+  G ++ F FA  +R+       QPEFT +     + A    + 
Sbjct: 238 -YCLPQSPQQFKQLLMVGGLDRYFQFARCYRDEGTKPDRQPEFTQVSRNLVHIARPDRQP 296

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                   +   A    Q  F+  + N    + P+ 
Sbjct: 297 EFTQVSPNLVHIARPDRQPEFTQVSSNLVHIARPDR 332



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 8/119 (6%)

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
            + +         P PE A       D   +  ++L     E+      + D   Q++  
Sbjct: 556 TVELESAHHPFTAPHPEDAEFIYTKPDKVRSLHYDLVYNGAEIAGGSIRIHDAKLQKYVL 615

Query: 289 EKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           ++ ++E     + +       L  L    P   GIA+GFDR + ++ G  +I +VI  P
Sbjct: 616 DEILKE----DSSSLY---HLLEALESGAPTHGGIAIGFDRYISMLRGTQSIRDVIAFP 667


>gi|315122137|ref|YP_004062626.1| aspartyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495539|gb|ADR52138.1| aspartyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 598

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 13/191 (6%)

Query: 18  RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
           RR  L    +KR  I SS+R   +   FIE  +  L   SP      +            
Sbjct: 134 RRDTLHKNIVKRANIISSMRHRMIAENFIEYSTPILTASSPEGARDFLVPSRVNQGSFYA 193

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
           + +      +P+   + L+A+G ++ F  A  +R+ +      P EF  L+   +    E
Sbjct: 194 LPQ------APQQYKQLLMASGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVEMSFVEQE 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            ++    N++R   E   +     QN     + +       +       I +    ++  
Sbjct: 248 DVLNTMENVLRGLFEEFAEGYPVSQNFPRICYDDAIRKYGTDKPDLRNPIIMNNVTEHFA 307

Query: 191 QPDRHLLYLQA 201
             +  +     
Sbjct: 308 CSEFRVFSKML 318



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 44/155 (28%), Gaps = 17/155 (10%)

Query: 200 QAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT 259
            AQ+ G+  ++      I      E  E    I         P                 
Sbjct: 419 IAQELGMIDSNRFELCWIVDFPFYEWNEEEKKIEFAHNPFSMPQGGMKSLKGDNLLSVKA 478

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACL 313
            +++L     E+ +              F      ++ ++ +                  
Sbjct: 479 FQYDLVCNGFEIASGGIRNYMSDIMIQAFSNVGISKEAVESRFGG----------LYRAF 528

Query: 314 -TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              MP   G+A G DR+VML+  A ++ EV   P 
Sbjct: 529 QYGMPPHGGMAAGIDRIVMLLLRAKSVREVSLFPM 563


>gi|9294235|dbj|BAB02137.1| unnamed protein product [Arabidopsis thaliana]
          Length = 529

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 295 KKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNIN 340
           ++   +E   +DE F   L   +P + G  MG DR +ML+T + NI 
Sbjct: 460 RQSGDDEAMAMDETFCMALEYGLPPTGGWGMGIDRPLMLLTDSQNIK 506


>gi|295093803|emb|CBK82894.1| Aspartyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 343

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 60/182 (32%), Gaps = 17/182 (9%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D    + + ++           + G R+  ++  +  F  I    +      +   I   
Sbjct: 147 DTIFFIADVEELAASFAGQIRIELGNRLDLNEKNAFRFCYINDFPMYEYDKESKKIIFTH 206

Query: 241 YPAPESA--LANIYPADPRF--TKRFELYACNIELCNACDELLDPIEQRHRFEK----EM 292
            P       L  +   DP      ++++    IEL +      D       FE     E 
Sbjct: 207 NPFSMPQGGLEALNEKDPLDILAYQYDIVCNGIELSSGAVRNHDMKIMVKAFEIAGYTED 266

Query: 293 QEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
             K+K                    P  +G+A G DR++ML+    NI EVI  P + + 
Sbjct: 267 DLKEKFG--------ALYNAFQFGAPPHAGMAPGVDRMIMLLRNEENIREVIPFPMNGNA 318

Query: 352 QE 353
           Q+
Sbjct: 319 QD 320


>gi|89055657|ref|YP_511108.1| aspartyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|122999376|sp|Q28MH9|SYD_JANSC RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|88865206|gb|ABD56083.1| aspartyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 591

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 67/197 (34%), Gaps = 7/197 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  ++ R+ + +S+R+   + QF E  +  +   SP      R F          
Sbjct: 134 RREKMQTNMMLRSDVVASIRKRMWDKQFREYQTPIITASSPEG---ARDFLVPSRQH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G +K F  A  +R+ +      P +F  L+   +    + 
Sbjct: 189 GKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVEQQD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++R   E         Q      +++       +       I +    ++   
Sbjct: 249 VFDTIEPVLRGVFEEFGDGATVDQQWPLISYADAALWYGTDKPDLRNPIKMQIVSEHFAG 308

Query: 192 PDRHLLYLQAQQAGIRV 208
               +     +Q G +V
Sbjct: 309 SGFAIFAKLLEQEGTQV 325



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 52/160 (32%), Gaps = 20/160 (12%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT-- 259
            + G+   +   ++ I    + E  E    I+        P            DP     
Sbjct: 419 DELGLTEQNRFAFAWIVDFPMFEADEETGKIDFSHNPFSMPQ---GGLAALDGDPLSVLG 475

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL 313
            +++L     EL +       P      FE       E++++       +          
Sbjct: 476 YQYDLACNGYELVSGAIRNHQPEIMFKAFEVAGYGADEVRKRFGGMVNAFQ--------- 526

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 527 YGAPPHGGCAAGIDRIVMLLADTANIREVILFPMNQRAED 566


>gi|307127750|ref|YP_003879781.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306484812|gb|ADM91681.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 217

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 44/141 (31%), Gaps = 10/141 (7%)

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACN 268
                 D F       I  + G+   T +  YPA   +      P +P      +L    
Sbjct: 79  EHLEHGDDFGSPHETWISNHFGV--PTFVMNYPAAIKAFYMKPVPGNPERVLCADL---- 132

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFD 327
                   E++    +   ++  + +  ++  +     E +L           G  +G +
Sbjct: 133 -LAPEGYGEIIGGSMREEDYDALVAKMDELGMDRTEY-EFYLDLRKYGTVPHGGFGIGIE 190

Query: 328 RLVMLVTGANNINEVIWTPFS 348
           R+V    G  +I E I  P  
Sbjct: 191 RMVTFAAGTKHIREAIPFPRM 211


>gi|319408645|emb|CBI82300.1| Aspartyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 596

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 67/196 (34%), Gaps = 29/196 (14%)

Query: 4   IPSQPWWNRD------FHYR----RRPFL----LKRNMIQSSLREYFVENQFIEIDSMSL 49
           +P   +   D        YR    RR  +    ++R  I +S+R++     F E  +  L
Sbjct: 110 LPLPVFGEPDYPEDIRLKYRFLDLRRTTMHKNIMRRTEIIASIRKHMQNCAFTEFTTPLL 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     I     K   L  +P+   + L+ +G ++ F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRIH--QGKFYALPQAPQQYKQLLMVSGFDRYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P EF  L+   +    E ++     IIR         +F               
Sbjct: 225 PRADRLPGEFYQLDVEMSFVEQEDVLATMEPIIR--------SVFEEFADGKCVTQSFPR 276

Query: 168 ITVAEAFARYANIDLG 183
           I+  EA  +Y +    
Sbjct: 277 ISYDEAIQKYGSDKPD 292



 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 46/150 (30%), Gaps = 11/150 (7%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  +      + + I      E  E    ++        P       +          +
Sbjct: 420 EELDLIDHKCFSLAWIVDFPFFEWNEDEKKLDFAHNPFSMPQGGKEAIDCQDPLTIKAFQ 479

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LACL-TEMP 317
           ++L     E+ +       P      F      K    +E   ++E F           P
Sbjct: 480 YDLVCNGYEIASGGIRNHSPEMMLKIF------KLAGLSEE-VVEERFGGLYRAFHYGAP 532

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              G+A G DR+VML+ G  N+ E+   P 
Sbjct: 533 PHGGMAAGIDRIVMLLQGVKNLREISLFPM 562


>gi|320586573|gb|EFW99243.1| aspartyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 566

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 97/311 (31%), Gaps = 33/311 (10%)

Query: 14  FHYR---RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD 70
            H R   ++     R  ++   R Y    +F E +   L  +  +E     F        
Sbjct: 235 MHKRAPVQQAIADIRIEVKKLFRSYLEARRFKEFEPPCLIGAA-SEGGANVFRLP----- 288

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +  +  +L  SP+F  +  +A G E++FC    +R        H  EFT L+     +  
Sbjct: 289 YFGEEAFLAQSPQFYKQFEIAGGRERVFCIGPVFRAENSNTPRHMTEFTGLDVEMEIKDS 348

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              +   +  +  +     Q+             E + +            +LG  +   
Sbjct: 349 YTEVISILEGVLLSIFRGLQE---------RCAVEIDTVRSVYHSEPLLLPELGKEVRLT 399

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
               + LL  +       V  D+  S    + L E +      +   ++D++P       
Sbjct: 400 FAEAQQLLRDEGPPEFANVRDDEDMSTPQEKALGEVVRTKYKTD-FYVIDKFPETARPFY 458

Query: 250 NIYP-------ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                         R T  F+++    E+ +    + DP E   R       + K  N  
Sbjct: 459 AKIDDAGTRVGDGVRVTNAFDMFIRGQEVLSGGQRIHDPAELEER------IRDKGVNPE 512

Query: 303 YPIDEDFLACL 313
               +++L   
Sbjct: 513 SAGIKEYLTTF 523


>gi|330916413|ref|XP_003297410.1| hypothetical protein PTT_07805 [Pyrenophora teres f. teres 0-1]
 gi|311329920|gb|EFQ94492.1| hypothetical protein PTT_07805 [Pyrenophora teres f. teres 0-1]
          Length = 799

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 93/329 (28%), Gaps = 41/329 (12%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--- 52
           +  +P         H R R       L  R+++ + +  YF ++ F++     +  S   
Sbjct: 165 LRTLP---------HLRSRLPFNSLILRLRSLVTAEVTRYFAKHDFVQCHPPIITSSDCE 215

Query: 53  PGNETHIRA------FSTELIIQDH-------IRKPLYLQTSPEFSCKKLLAAGEEKIFC 99
              E    A        T+L               P YL  S +    + LA    K++ 
Sbjct: 216 GAGEVFTVAPGAPAIPDTQLSNHQAKQHDDQFFGSPKYLTVSSQLHL-EALAQSVNKVWA 274

Query: 100 FAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNII------RCAAEVANQKIF 152
            +  +R  +     H  EF MLE   A      ++ D +  +              +++ 
Sbjct: 275 LSPTFRAEKSDTARHLSEFYMLEAELAFVDDVNVVMDVVEDMLRSVASELQTSSVGRELL 334

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDD 212
             +  +      P  ++      R+  +  G       +     L     QA +   +  
Sbjct: 335 EARARDQEEERTP--VSHTVLAQRWQGLVAGPWPRITYKAAVQHLKDAVAQAKVEFEYAP 392

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN-IYPADPRFTKRFELYACNIEL 271
              D         +  ++G      +  YP                  +     AC   L
Sbjct: 393 GHEDGLQTEHERYLADSMGRGGPVFITNYPRIIKPFYMAPSTDAAAEEEAASTVACFDLL 452

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYN 300
                EL+    + HR  + ++       
Sbjct: 453 VPEICELVGGSMREHRLPELVKSMNDHGL 481


>gi|71408438|ref|XP_806623.1| aspartyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70870422|gb|EAN84772.1| aspartyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 261

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 80/265 (30%), Gaps = 31/265 (11%)

Query: 105 RNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFS 163
           R        H  EF  L+       +   + D    + C       K  + +        
Sbjct: 1   RAENSNTHRHLTEFVGLDVEMRINEHYYEVLDTAEELFCYMFAQLAKH-TGELEAICRQY 59

Query: 164 EPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF----- 218
             E +       +   + +G   D+ +  D +   ++     +   H      +      
Sbjct: 60  PFEPLLWQLTPEKIKELGVGVIEDSVEPTDIYKARVRNMGTRMLRIHYPHCIALLNTVLE 119

Query: 219 -------------SRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFEL 264
                         ++L + ++   G++   I D +P          +P D RFT  +++
Sbjct: 120 EKLSLTDDINTTNEKLLGKLVKERYGVD-FFISDLFPTAARPFYTMPFPDDERFTNSYDM 178

Query: 265 YACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIA 323
           +    E+ +    + D      R      +   +        +D++           G  
Sbjct: 179 FIRGEEISSGAQRIHDSSLLLKR-----AQSLGVDLSPI---KDYVDSFRLGAWPHGGFG 230

Query: 324 MGFDRLVMLVTGANNINEVIWTPFS 348
           +G +R+VML  G +N+  V   P  
Sbjct: 231 VGLERVVMLYLGLSNVRLVSLFPRD 255


>gi|224542002|ref|ZP_03682541.1| hypothetical protein CATMIT_01175 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525059|gb|EEF94164.1| hypothetical protein CATMIT_01175 [Catenibacterium mitsuokai DSM
           15897]
          Length = 46

 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 3/48 (6%)

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           +D D++  L   +P + G  MG DRLVML+TG   I EVI  P  ++ 
Sbjct: 1   MDMDYVEALEYGLPSTGG--MGIDRLVMLLTGQETIREVILFPHMKNK 46


>gi|70937148|ref|XP_739420.1| asparagine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56516407|emb|CAH80476.1| asparagine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 458

 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/349 (12%), Positives = 78/349 (22%), Gaps = 70/349 (20%)

Query: 3   QIPSQPWW---NRDF-HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +  +       R+  H R R       +  RN +  S   +F    FI I +  +  S 
Sbjct: 105 PLSKKNHGKEFLREVAHLRPRSYFISSVMRIRNALMVSTHLFFQSRGFICIQTPLITTSD 164

Query: 53  --PGNE-----------------------------------THIRAFSTELIIQDH---- 71
              G E                                   T     +      +     
Sbjct: 165 CEGGGEMFTVTTLLNENGDISAIPKTKKKTSNNQTVKREDQTANEPIANTTNNTNEYVID 224

Query: 72  -----IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRA 125
                  K  +L  S + S +  L +    ++ F   +R        H  EF M+E   A
Sbjct: 225 YKKDFFSKQAFLTVSGQLSLEN-LCSSMGDVYTFGPTFRAESSHTSRHLAEFWMIEPEMA 283

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
                  M+     I+                +   F E     + +      N D    
Sbjct: 284 FADIYDNMEVAEAYIKYCIRYV----LDNHFHDIYYFEENVEKGLIDRLKNILNDDFAKI 339

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                            +          W           I   +      I+  YP   
Sbjct: 340 TYT-------NAIDLLTKYSTNFDVPVKWGMDLQSEHERFIAEQIFKKPV-IVYNYPKDL 391

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
            A       D +     ++    I       +  D +E   +   E + 
Sbjct: 392 KAFYMKLNDDQKTVAAMDVLVPKIGEVIGGSQREDNLELLDKMIVEKKL 440


>gi|217032013|ref|ZP_03437514.1| hypothetical protein HPB128_187g40 [Helicobacter pylori B128]
 gi|216946323|gb|EEC24929.1| hypothetical protein HPB128_187g40 [Helicobacter pylori B128]
          Length = 76

 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             L  L    P   G A+GFDRL+ML+T +++I +VI  P
Sbjct: 7   FLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSIRDVIAFP 46


>gi|254502618|ref|ZP_05114769.1| aspartyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222438689|gb|EEE45368.1| aspartyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 593

 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 52/160 (32%), Gaps = 20/160 (12%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT-- 259
           ++ G        ++ I    + EK E    I+        P            DP     
Sbjct: 420 EELGHTDKDRFEFAWIVDFPIYEKDEETGEIDFEHNPFSMPQ---GGMEALEGDPLEVLG 476

Query: 260 KRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL 313
            +++L     EL +       P      FE      +E+ ++       +          
Sbjct: 477 WQYDLSCNGHELVSGAIRNHKPEIMYKAFEIAGYPNEEVNKRFGGMVNAFQ--------- 527

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G A G DR+VML+    NI EV+  P +Q  ++
Sbjct: 528 YGAPPHGGCAAGIDRIVMLLADEANIREVMLFPMNQKAED 567



 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 63/197 (31%), Gaps = 7/197 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ +   +R+      F E  +  +   SP      R F     +    
Sbjct: 134 RREKLHNNMILRSNVVRDIRDRMWAIGFNEFQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + L+ +G +K F  A  +R+ +      P +F  L+   +  + ++
Sbjct: 189 GKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDMEMSFVTQQE 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    E         +N     + +       +       I +    ++   
Sbjct: 249 VFDTIEPVIAGVFEKFGNDRPVNRNWPQISYKDSALWYGTDKPDLRNPIKMQIVSEHFAG 308

Query: 192 PDRHLLYLQAQQAGIRV 208
               +     +Q G  +
Sbjct: 309 SGFAIFANLLEQPGTEI 325


>gi|239618190|ref|YP_002941512.1| tRNA synthetase class II (D K and N) [Kosmotoga olearia TBF 19.5.1]
 gi|239507021|gb|ACR80508.1| tRNA synthetase class II (D K and N) [Kosmotoga olearia TBF 19.5.1]
          Length = 314

 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 60/339 (17%), Positives = 101/339 (29%), Gaps = 67/339 (19%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTELIIQDHIRKPL 76
           R  LL ++ +   LRE      F+EI  + L     P N     A          + K +
Sbjct: 22  RDALLVQSELLKGLRETLDAKGFVEILPVILSPITDPLNHEVFDASVEYYGQNYAVTKSM 81

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC----LHQPEFTMLEWYRAHESYEQL 132
            L        K++     EKI+  +   R           H  EF  L+   A  S +++
Sbjct: 82  ILH-------KQISVLVHEKIYSVSPNVRLETADKADSGRHLFEFVQLDMEVAGASRDEI 134

Query: 133 MKDCMNIIRCAAEVANQKIFS----FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           M    + I  A      K       +      P    + ITV EA  +Y           
Sbjct: 135 MDVMEDAIIYAIRNVLSKYPWVKEKYHPTLKVPAKPFKRITVKEAVEKYG---------- 184

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                      +A ++G+    D               EP   I+   +   +       
Sbjct: 185 -----------EAFESGLSKDID---------------EPVWLIDIPLLNREF------Y 212

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
               P  P     F+L            E +   E+ H +E+ ++  K           D
Sbjct: 213 DKQDPERPDVLLDFDLI-----YPEGFGEGISGGEREHEYEQIIRRMKLKGTSPEEY-TD 266

Query: 309 FLA-CLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +L       +  S+G  +G +R    V G  ++ +    
Sbjct: 267 YLELAKQGVLKPSAGCGIGIERFTRYVMGLEHVRQTRLF 305


>gi|84499750|ref|ZP_00998038.1| aspartyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84392894|gb|EAQ05105.1| aspartyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 636

 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 89/280 (31%), Gaps = 39/280 (13%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +++        YR    RR  + +    R+ + +S+R+   +  F E  +  +
Sbjct: 110 LPLIVFGDQEYPEETRLRYRYLDLRREVMQQNMTLRSDVVASMRKRMWDKGFREYQTPII 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
              SP      R F     +        Y L  +P+   + L+ +G +K F  A  +R+ 
Sbjct: 170 TASSPEG---ARDFLVPSRLH---PGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDE 223

Query: 108 EQGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
           +      P +F  L+   +  + + +      +I    E              +  +E  
Sbjct: 224 DPRADRSPTDFYQLDMEMSFVTQQDVFDTIAPVIGGVFEE------FGGGRKVDAPAEWP 277

Query: 167 YITVAEAFARYA--------NIDLGTTLDNPDQPDRHLLYLQAQQAG--IRVAHDDTWSD 216
            IT A+A  +Y          I++    ++       +     +Q G  IR         
Sbjct: 278 QITYADAALKYGTDKPDLRNPIEMQVVSEHFRGSGFAIFAKLLEQEGTEIRAIPAPKGGS 337

Query: 217 IFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                 +       G+     +        + A   P  P
Sbjct: 338 RKFCDRMNAFAQKEGLPGMGYIFWRRTELPSEAKNNPEHP 377



 Score = 74.3 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 53/158 (33%), Gaps = 16/158 (10%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
            + G+       ++ I    + E  E    ++        P       +  P +     +
Sbjct: 464 DELGLTDTERFAFAWIVDFPMYEADEETGAVDFSHNPFSMPQGGLDALSGDPLEV-LGYQ 522

Query: 262 FELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDEDFLACLTE 315
           ++L     E+ +       P      F      E E++++       +            
Sbjct: 523 YDLACNGYEIISGAIRNHKPEIMFKAFDLAGYGEDEVRKRFGGMVNAFQ---------YG 573

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G A G DR+VML+   +N+ +V+  P +Q  ++
Sbjct: 574 APPHGGCAAGVDRIVMLLADEDNLRDVMLFPMNQRAED 611


>gi|207109586|ref|ZP_03243748.1| aspartyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 175

 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 18/107 (16%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-H 58
           N D   + R               R+ +    R    +  F+EI++  L   +P     +
Sbjct: 75  NEDLRLKYRYLDLRSLNAYEIFKLRSEVALIARNTLAQKGFLEIETPILSKTTPEGARDY 134

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
           +            + +      SP+   + L+  G ++ F  A  +R
Sbjct: 135 LVPSRVHEGEFFALPQ------SPQLFKQLLMVGGMDRYFQIARCFR 175


>gi|218512638|ref|ZP_03509478.1| aspartyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 239

 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 47/163 (28%), Gaps = 11/163 (6%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +          I      E  E    ++        P            
Sbjct: 83  EARTKAGEELNLVDRDRFELCWIVDFPFFEWSEEEKKVDFAHNPFSMPQGGLDALQNQDP 142

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 +++      E+ +       P       E  +   +KI      +++ F     
Sbjct: 143 LTIKAFQYDAVCNGFEIASGSIRNQSP-------ETMVAAFEKIGLSQQDVEDRFGGLYR 195

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G A G DR++ML+ GA N+ E+   P +Q  Q+
Sbjct: 196 AFQYGAPPHGGAAFGIDRIIMLLVGAKNLREISLFPMNQQAQD 238


>gi|118566854|gb|ABL01746.1| unknown [Salmonella enterica subsp. enterica serovar Typhi]
          Length = 136

 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 6/139 (4%)

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
            +YL+ +PE   K+L+  G E++F     +RN      H PEFTM+E Y A+  Y+ L++
Sbjct: 1   DMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIE 60

Query: 135 DCMNIIRCAAE-VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
              ++ R  A+ V       + +   +     E +T+ EA  +Y         D  D  +
Sbjct: 61  LTESLFRTLAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKY-----RPETDMADLDN 115

Query: 194 RHLLYLQAQQAGIRVAHDD 212
                  A+  GI V    
Sbjct: 116 FDSAKAIAESIGIHVEKSW 134


>gi|169599773|ref|XP_001793309.1| hypothetical protein SNOG_02712 [Phaeosphaeria nodorum SN15]
 gi|160705320|gb|EAT89443.2| hypothetical protein SNOG_02712 [Phaeosphaeria nodorum SN15]
          Length = 537

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/297 (9%), Positives = 71/297 (23%), Gaps = 35/297 (11%)

Query: 55  NETHIRAFSTELIIQDHIRK---PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
            ET  +       ++    +      L+ S +   +  L +  +         R      
Sbjct: 265 GETASKVMIVRDAVEFAFNQVYREQRLRKSSQLYLETCLPSMGDVYCIEKSFPRREVTDP 324

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
                                    ++ I     + + +    + +            +A
Sbjct: 325 PPS--------------------GRLDYINFDDLLTHLEEVMCRVIEVTMSDPVVKQHIA 364

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
           +    +A  +              + +L              + D  +     ++     
Sbjct: 365 DLNPEFAMPERPFKRMKYQDA---IDWLVEHNIPNEDGEPHKFGDDIAEAAERRM--TDI 419

Query: 232 INCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
           IN    L  +P    +        DPR T+  +     +         +D  ++      
Sbjct: 420 INRPIFLTHFPTEIKAFYMLKDKEDPRVTESVDCLMPGVGEIVGGSMRMDNYDEL----M 475

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               +++I    Y    D            G  +G +R +  +   + + +    P 
Sbjct: 476 AAFAREQIDPAAYYWYTD--QRKYGSSPHGGYGLGLERFLAWLCKQHTVRDCCLYPR 530


>gi|224540812|ref|ZP_03681351.1| hypothetical protein BACCELL_05726 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224517571|gb|EEF86676.1| hypothetical protein BACCELL_05726 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 227

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 6/97 (6%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                R  L  R+ +   +R Y     FIE+++  L   +P      R F     +    
Sbjct: 132 RRPSVRRNLELRHRMTIEVRRYLDSQGFIEVETPVLVGSTPEG---ARDFVVPSRMN--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
            +   L  SP+   + L+ +G ++ F  A  +R+ + 
Sbjct: 187 GQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDL 223


>gi|156057967|ref|XP_001594907.1| hypothetical protein SS1G_04715 [Sclerotinia sclerotiorum 1980]
 gi|154702500|gb|EDO02239.1| hypothetical protein SS1G_04715 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 530

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 5/89 (5%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
              ++L    +EL      +     Q+  F  +   K  + +E     +     L    P
Sbjct: 417 ADHYDLVVNGVELGGGSKRIHSAEVQK--FIMKNVLK--MSDEKMSDFKHLFEALRAGCP 472

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +G A+GFDR V ++TG  ++ +VI+ P
Sbjct: 473 THAGFAIGFDRWVAVLTGRESVRDVIFFP 501


>gi|330936725|gb|EGH40910.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 211

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 18/96 (18%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  +N F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEK 96
              T       + +      SP+   + L+ AG ++
Sbjct: 182 PSRTHPGSFFALPQ------SPQLFKQLLMVAGFDR 211


>gi|254226645|ref|ZP_04920224.1| asparaginyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125620814|gb|EAZ49169.1| asparaginyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 418

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 78/297 (26%), Gaps = 43/297 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          RN +  ++  ++ E  +  + +  +  S       +  F    +
Sbjct: 140 AHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEM--FRVSTL 197

Query: 68  I---------------QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC- 111
                           QD   K  +L  S + + +    A   K++ F   +R       
Sbjct: 198 DMENLPRTDAGKVDYNQDFFGKETFLTVSGQLNAEAYACAIS-KVYTFGPTFRAENSNTS 256

Query: 112 LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
            H  EF M+E   A      + K   ++++   +    +    +  +   F++     V 
Sbjct: 257 RHLAEFWMVEPEVAFADLNTVAKLAEDMLKYVFKAVLAE----RRDDLEFFNDRINNEVI 312

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLG 231
               ++   D           D        +  G        W    +      +     
Sbjct: 313 ARLEQFVESDFAQV-------DYTDAIEILKNCGKTFEFPVEWGIDLASEHERFLAEEHF 365

Query: 232 INCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
                +   YP    A       D +             L     E++   ++  R 
Sbjct: 366 KAPVIVK-NYPKDIKAFYMRMNEDGKTVAAM------DVLAPGIGEIIGGSQREERL 415


>gi|302928295|ref|XP_003054676.1| hypothetical protein NECHADRAFT_31440 [Nectria haematococca mpVI
           77-13-4]
 gi|256735617|gb|EEU48963.1| hypothetical protein NECHADRAFT_31440 [Nectria haematococca mpVI
           77-13-4]
          Length = 709

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 12/128 (9%)

Query: 231 GINCCTILDRYPAPESALA--NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF 288
           GI         P  ++ L      P D +    ++L    +E+    + +     Q+   
Sbjct: 562 GIAASHHPFTAPLSQADLELLFTNPLDAKSA-AYDLVLNGVEVGGGSERIHVAEVQKFIM 620

Query: 289 EKEMQE-KKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           +  ++  KK+I +  +         L +  P  +G A+GFDRLV L+T    + + +  P
Sbjct: 621 KDILKVPKKRIADFAHLF-----EALQSGCPPHAGFALGFDRLVALMTDTATVRDAMAFP 675

Query: 347 FSQSNQEE 354
             ++ + E
Sbjct: 676 --KTMKGE 681



 Score = 79.3 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 79/241 (32%), Gaps = 12/241 (4%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFS 63
           P +  +   FH   +  L  R+ +++ L +  +   FI++++ +L + +P      R F 
Sbjct: 184 PHKRHYQIKFHPELQARLKFRSWLKAELTKGLLNKGFIDVETPTLFKSTPEG---AREFL 240

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                +        L  SP+   + L+A+G  +   +A  +R+ +     QPEFT L+  
Sbjct: 241 VPTRRR---GMAYALNQSPQQYKQILMASGIGQYMQWARCYRDEDSRADRQPEFTQLDME 297

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
            +     ++ +D  +I+  A E          +           +T      +  +  L 
Sbjct: 298 WSFAGAAKVRQDVNDIVLEALEAL----RPAHSYKEIRNQRVPILTEIPDGPQPTDEPLA 353

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                    D  +      +  +R+ +                      +       +P 
Sbjct: 354 HEFTTIKFQD-SIASYGTDKPDLRIPNKVHAIPDLEPYRQFVSMITDIEDPLVEAFTFPL 412

Query: 244 P 244
            
Sbjct: 413 E 413


>gi|149448248|ref|XP_001511312.1| PREDICTED: similar to Asparaginyl-tRNA synthetase 2, mitochondrial
           (putative), partial [Ornithorhynchus anatinus]
          Length = 545

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 62/202 (30%), Gaps = 20/202 (9%)

Query: 2   HQIPSQPWW-NRDFHYRRRPF---LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNE 56
           H +  +    +     R       L  R    +++  +F E+ ++ I +  +  +     
Sbjct: 132 HPL--EYLRQHPHLRCRSNTLGALLRVRGEATAAVHSFFKEHGYVHIHTPVITSNDCEGA 189

Query: 57  THIRAFSTELIIQD------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ- 109
             +  F  E               P +L  S +    ++++     +F F   +R     
Sbjct: 190 GEL--FQVEPSSPAREPGSLFFDVPAFLTVSGQLHL-EVMSGAFTHVFTFGPTFRAENSQ 246

Query: 110 GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
              H  EF M+E   A     + ++D   ++    +     + +    +   F +     
Sbjct: 247 SRRHLAEFYMVEAEVAFT---ESLQDITQVMEGLFKATTATVLARCPDDVRLFHKFVSPG 303

Query: 170 VAEAFARYANIDLGTTLDNPDQ 191
             +   +    +   +   P+ 
Sbjct: 304 HEDRLEKMLRNEFLVSWSIPEA 325


>gi|56695828|ref|YP_166179.1| aspartyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|62287519|sp|Q5LUX6|SYD_SILPO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|56677565|gb|AAV94231.1| aspartyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 593

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 65/191 (34%), Gaps = 27/191 (14%)

Query: 4   IPSQPWWNRD------FHYR----RRPFLLK----RNMIQSSLREYFVENQFIEIDSMSL 49
           +P   + +++        YR    RR  +      R+ + +S+R    +  F E  +  +
Sbjct: 110 LPLMVFGDQEYPEETRLRYRYLDLRREAMQANMTLRSDVVASMRRRMWDKGFREYQTPII 169

Query: 50  Q-YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
              SP      R F     +     +   L  +P+   + ++ +G +K F  A  +R+ +
Sbjct: 170 TASSPEG---ARDFLVPSRLH--PGRFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDED 224

Query: 109 QGCLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                 P +F  L+   +  + + +      ++    E              +   +   
Sbjct: 225 PRADRSPTDFYQLDLEMSFVTQQDVFDTIAPVLAGVFEEFGG------GRKVDAPQDWPQ 278

Query: 168 ITVAEAFARYA 178
           I  A+A   Y 
Sbjct: 279 IAYADAAKWYG 289



 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 54/155 (34%), Gaps = 12/155 (7%)

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G+       ++ I    + E+ E    I+        P            DP   + +
Sbjct: 422 ELGLTETDRFAFAWIVDFPIYERDEETGEIDFEHNPFSMPQ---GGMEALNGDPMAVRGY 478

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL----TEMPQ 318
           +        CN   EL+    + H+ E  ++  +        +   F A         P 
Sbjct: 479 QY----DLACNGY-ELVSGAIRNHKPEIMLKAFELAGYGADEVKARFGALFNAFHYGAPP 533

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             G A G DR+VML+    NI EV+  P +Q  ++
Sbjct: 534 HGGCAAGIDRIVMLLADEANIREVMMFPMNQRAED 568


>gi|156042712|ref|XP_001587913.1| hypothetical protein SS1G_11155 [Sclerotinia sclerotiorum 1980]
 gi|154695540|gb|EDN95278.1| hypothetical protein SS1G_11155 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 279

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 55/190 (28%), Gaps = 8/190 (4%)

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E                G   ++  +        + Q++G    H   +           
Sbjct: 37  EETDTINRNWELTRRWEGMMKESWPRITYTRAIKELQESGQSFEHPPIFGSGLQAEHERY 96

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
           I   +G+     +  YP P      +   +    K  E   C   L     E++    + 
Sbjct: 97  IADAIGLGSPVFVTDYPKPIKPFYMLPSENSGEGKTSETVQCFDLLVPEVCEIVGGSMRE 156

Query: 286 HRF-EKEMQEKKKIYNETYPIDEDF-----LACLT--EMPQSSGIAMGFDRLVMLVTGAN 337
           +R  E     +          +EDF        L         G  +GFDRL+  + G  
Sbjct: 157 YRLPELISAMRANGMVRGDAGEEDFGSLKWYTELRRWGSVPHGGFGLGFDRLLGYLAGVQ 216

Query: 338 NINEVIWTPF 347
           NI E++  P 
Sbjct: 217 NIREIVTFPR 226


>gi|189200501|ref|XP_001936587.1| asparaginyl-tRNA synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187983686|gb|EDU49174.1| asparaginyl-tRNA synthetase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 601

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/333 (14%), Positives = 95/333 (28%), Gaps = 48/333 (14%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--- 52
           +  +P         H R R       L  R+++ + + +YF ++ F++     +  S   
Sbjct: 151 LRTLP---------HLRSRLPFNSLILRLRSLVTAEVTKYFAKHDFVQCHPPIITSSDCE 201

Query: 53  PGNETHIRAFSTELIIQDHIRKPL----------------YLQTSPEFSCKKLLAAGEEK 96
              E     F+          K L                YL  S +    + LA    K
Sbjct: 202 GAGEV----FTVAPGAPAVPDKQLSNQAKQHEDQFFGSPKYLTVSSQLHL-EALAQSVNK 256

Query: 97  IFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNII------RCAAEVANQ 149
           ++  +  +R  +     H  EF MLE   A  +   ++ D +  +              +
Sbjct: 257 VWALSPTFRAEKSDTARHLSEFYMLEAELAFVNNVNVVMDVVEDMLRSVASELQTSSVGR 316

Query: 150 KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
           ++   +  +      P  ++      R+  +  G       +     L     Q  +   
Sbjct: 317 ELLEARARDQEEERTP--VSHTVLAQRWQGLVAGPWPRITYKAAVQHLKDAVAQGKVGFE 374

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR-FELYACN 268
           +     D         +  ++G      +  YP            D    +      AC 
Sbjct: 375 YAPGHEDGLQTEHERYLADSMGRGGPVFITDYPRLIKPFYMAPSTDAAAEEEGASTVACF 434

Query: 269 IELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
             L     EL+    + HR  + ++       E
Sbjct: 435 DLLVPEICELVGGSMREHRLPELVKSMHDHGLE 467


>gi|307946773|ref|ZP_07662108.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307770437|gb|EFO29663.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 603

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 54/163 (33%), Gaps = 12/163 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
               +  ++ G        ++ I    + E+ E    I+        P          P 
Sbjct: 422 KARNIIGEELGHTDKDRFEFAWIVDFPIYERDEETGEIDFEHNPFSMPQGGMEALESDPL 481

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
           +     +++L     EL +       P      FE         Y +   +D+ F   + 
Sbjct: 482 EV-LGYQYDLTCNGNELVSGAIRNHKPEIMYKAFEI------AGYPKE-EVDKRFGGMVT 533

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                 P   G A G DR+VML+   + I EV+  P +Q  ++
Sbjct: 534 AFQYGAPPHGGCAAGIDRMVMLLADESTIREVVMFPMNQKAED 576



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 65/197 (32%), Gaps = 7/197 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ +   LRE      F E  +  +   SP      R F     +    
Sbjct: 143 RREKLHNNIVLRSDVVKDLRERMWNLGFNEFQTPIITASSPEG---ARDFLVPSRLH--P 197

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +  + ++
Sbjct: 198 GKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDMEMSFVTQQE 257

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    E   +     +N     + +      ++       + +    ++   
Sbjct: 258 IFDTIEPVIAGCFERFGKGRPVNRNWPQISYKDAALWYGSDKPDLRNPLKMQIVSEHFKG 317

Query: 192 PDRHLLYLQAQQAGIRV 208
               +     +Q G  +
Sbjct: 318 SGFAIFANLLEQPGTEI 334


>gi|169595894|ref|XP_001791371.1| hypothetical protein SNOG_00694 [Phaeosphaeria nodorum SN15]
 gi|160701182|gb|EAT92189.2| hypothetical protein SNOG_00694 [Phaeosphaeria nodorum SN15]
          Length = 501

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMP 317
              +++    +EL      + +   Q   F   ++ K     E        L  L +  P
Sbjct: 387 AAHYDIVVNGVELGGGSRRIHNAAVQEFIFRDALKMK----PERIEDFRHLLNVLASGCP 442

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +GIA+G+DRL+ ++ G+ ++ +VI  P
Sbjct: 443 PHAGIALGWDRLIAVMRGSESVRDVIAFP 471



 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 58/176 (32%), Gaps = 20/176 (11%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLY 77
           R  LL R       R +  E+++ EI++  L + +P      R F      +        
Sbjct: 60  RNNLLFRAQKVLEARVHLNEHEWTEIETPILFKSTPEGA---REFLVPTREK---GLAYA 113

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L  SP+   + L+A+G  K F FA  +R+ +     QPEFT L+   A            
Sbjct: 114 LPQSPQQYKQILMASGLTKYFQFARCFRDEDLRADRQPEFTQLDMEMAFAG--------- 164

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
                      +++        +       +   EA + Y   D           D
Sbjct: 165 ---EEDVMAQTERLLQSIWKKNDKGERFPRMKYQEAMSSY-GSDKPDLRYEAKVID 216


>gi|322491581|emb|CBZ26854.1| putative aspartyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 641

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSL----REYFVENQFIEIDSMS 48
            +P  P+ + +     R            ++  + + S+L    R   +   FIE+ +  
Sbjct: 224 PLPF-PYHDTNAKLDTRLNHRVMDLRTEKMIATSRLVSALGQSFRNELLARDFIEVHTPK 282

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L  +  +E     F       D+  +  YL  SP+   + ++     ++F     +R   
Sbjct: 283 LLGAA-SEGGSNVFRV-----DYFERKAYLAQSPQLHKQMMVMGDAMRVFEVGPVFRAEN 336

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
                H  EF  L+     +     + D +  + CA      +          
Sbjct: 337 SLTHRHLTEFVGLDGEMVVKDSHTEVLDVLEPVMCAVLAHLTQQHGNLIDALW 389



 Score = 76.2 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 55/140 (39%), Gaps = 23/140 (16%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP----RFTKRFELYACNIELCN 273
             R L + I+   G++   ++D +P+       + P DP      T+ +++Y    E+C+
Sbjct: 510 QERRLGQLIKERYGVDL-YVIDGFPSSVRPFYTM-PVDPSMPDGPTRSYDMYLRGEEICS 567

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE----DFLACL-TEMPQSSGIAMGFDR 328
               +     Q    E+ +  KK        +D+    D++           G  +G +R
Sbjct: 568 GAQRVH----QIELLEQRLSAKK--------VDKVSVKDYVDSFRYGAWPHGGFGLGLER 615

Query: 329 LVMLVTGANNINEVIWTPFS 348
           + +   G ++I +V   P  
Sbjct: 616 IALFFLGLSDIRQVSLFPRD 635


>gi|256080760|ref|XP_002576645.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238661922|emb|CAZ32882.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 375

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 53/178 (29%), Gaps = 17/178 (9%)

Query: 11  NRDFHYRRR----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R                  +     EY     F+ I +  +  +  +E    
Sbjct: 200 NQDTRLDNRCIDLRTPVNQAIYRIEAGVVKFFMEYLTNAGFVNIHTPKMISAA-SEGGAN 258

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
            F        +     YL  SP+   +  +AA  E++F     +R  +     H  EF  
Sbjct: 259 VFRV-----SYFSGSAYLAQSPQLYKQMAIAADFERVFTIGSVFRAEDSNTHRHLTEFVG 313

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           L+   A +++   + D +  +        Q+ +  +          E     +    Y
Sbjct: 314 LDIEMAFKNHYHEVVDLIADMFVHMFKGLQREYQTEIQIICQQYHSEPFEFLQPTYVY 371


>gi|116334977|ref|YP_802472.1| aspartyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
 gi|116235258|dbj|BAF35106.1| aspartyl-tRNA synthetase [Candidatus Carsonella ruddii PV]
          Length = 425

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 116/344 (33%), Gaps = 35/344 (10%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
           FL  ++ I   +R +F  N ++E+D   ++    + +  + F   +I ++  +  L L  
Sbjct: 84  FLKLKSKIIYFIRLFFSINNYLELDIPIIEKYTSSGS--KQFL--IIDKNKKKYFLSLTQ 139

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           SP+   +  +     K F  A  +R+ +       EF  ++   ++  +    K     +
Sbjct: 140 SPQKIKQYYMFNAINKYFQIAKCFRDEDSRSSRIKEFQQIDIENSNTIFLNFKKKINLFL 199

Query: 141 RCAAEVANQKI---------------FSFQNVNCNPFSEPEYITVAEAF---ARYANIDL 182
           +       +K                F  +N+N     + + I  +  +    +   I++
Sbjct: 200 KSLIFFILKKKTLILKIKYKFIKKYLFEKKNLNLPYLYKKKIIKNSYIYILKTKLKKIEI 259

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL-DRY 241
             +          +L L+ Q     ++   +        L   +   +          ++
Sbjct: 260 NKSFYFKLSKYYIILTLKKQDYNFCLSLKLSHKYNNLINLNIILLWIIDFYYFKNKKIKH 319

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
               +   N        +  ++++   IE+       ++ + Q   F    ++ K I   
Sbjct: 320 HQFTAFKNNFKNFYNSKSLAYDVFLNGIEIGGGSIRNINFLIQNKIFLNSKKKSKFIN-- 377

Query: 302 TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
                  +   L   P   GIA G +R++ L+    NI + I  
Sbjct: 378 ------FYKRAL---PHHCGIAFGLERIISLLI-KKNIKKTITY 411


>gi|256068907|ref|XP_002570964.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238651840|emb|CAZ38649.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 80

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E FL  L +  P   GIA+G DRL+ +   A +I +VI  P
Sbjct: 7   EYFLTALNSGTPPHGGIALGLDRLIAIFVNAKSIRDVIAFP 47


>gi|1483209|emb|CAB01404.1| aspartyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 68

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
              P   GIA GFDRL ML+ G ++I + I  P  +
Sbjct: 4   YGTPPHGGIAYGFDRLCMLLLGLDSIRDTIAFPKVK 39


>gi|10434271|dbj|BAB14197.1| unnamed protein product [Homo sapiens]
          Length = 190

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 300 NETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            E   +    L  L    P   GIA+G DRL+ LVTG+ +I +VI  P
Sbjct: 103 KEDVKMLSHLLQALDYGAPPHGGIALGLDRLICLVTGSPSIRDVIAFP 150


>gi|163735286|ref|ZP_02142721.1| aspartyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161391500|gb|EDQ15834.1| aspartyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 589

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 65/197 (32%), Gaps = 7/197 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ + +SLR+   +  F E  +  +   SP      R F     +    
Sbjct: 132 RRANMQANMKLRSDVVASLRQQMWKADFREFQTPIITASSPEG---ARDFLVPSRLH--P 186

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            +   L  +P+   + L+ +G +K F  A  +R+ +      P +F  L+   +  + + 
Sbjct: 187 GRFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDIEMSFVTQQD 246

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    E         Q      + +      ++       I + +  ++   
Sbjct: 247 VFDVIQPVLTGLFEEFGNGKAVDQEWPQISYKDAALWYGSDKPDLRNPIKMQSVSEHFAG 306

Query: 192 PDRHLLYLQAQQAGIRV 208
               +     +Q G  +
Sbjct: 307 SGFAIFANLLEQEGTEI 323



 Score = 76.2 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 15/99 (15%)

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACLT 314
           +++L     EL +       P      FE       E++++       +           
Sbjct: 475 QYDLSCNGYELVSGAIRNHKPEIMFKAFEIAGYGEDEVRKRFGGMVNAFQ---------Y 525

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 526 GAPPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRAED 564


>gi|295093804|emb|CBK82895.1| Aspartyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 240

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 8/104 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHI 72
            + + +  ++ R+ + S LR+   E  F+EI +  L   SP      R +          
Sbjct: 134 RNKKVKDNMIFRSQVISYLRQKMTEMGFLEIQTPILCASSPEG---ARDYIVPSRK---F 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP 115
           +   Y L  +P+   + L+ +G +K F  A  +R+ +      P
Sbjct: 188 KGKFYALPQAPQQYKQLLMVSGFDKYFQIAPCFRDEDARADRSP 231


>gi|310814751|ref|YP_003962715.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308753486|gb|ADO41415.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 593

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 61/195 (31%), Gaps = 9/195 (4%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ + +S+R+      F E  +  +   SP      R F     +    
Sbjct: 134 RREDMQRKMTLRSDVVASIRQRMWGKGFREYQTPIITSSSPEG---ARDFLIPSRLH--- 187

Query: 73  RKPLY-LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYE 130
               Y L  +P+   + L+ +G +K F  A  +R+ +      P +F  L+   +  + +
Sbjct: 188 PGKFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDMEMSFVTQK 247

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +      ++    E                + +      ++       I +    ++  
Sbjct: 248 DVFDTIQPVLSGLFEEFGGGRKVDTEWPQISYKDAALWYGSDKPDLRNPIKMQVVSEHFA 307

Query: 191 QPDRHLLYLQAQQAG 205
                +     +Q G
Sbjct: 308 GSGFAVFAKLLEQDG 322



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 17/100 (17%)

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLACL- 313
           +++L     EL +       P      FE       E++ +              +    
Sbjct: 478 QYDLACNGYELVSGAIRNHQPEIMFKAFEIAGYGPDEVRRRFGGM----------VNAFT 527

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
              P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 528 YGAPPHGGCAAGIDRIVMLLADEQNIREVILFPMNQRAED 567


>gi|156229920|gb|AAI52078.1| Zgc:154056 protein [Danio rerio]
          Length = 168

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 43/123 (34%), Gaps = 10/123 (8%)

Query: 228 PNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                    +LD+YP           P +P+++  ++++    E+ +    + D      
Sbjct: 48  KEKYDTDFYVLDKYPLAVRPFYTMPDPNNPKYSNSYDMFMRGEEILSGAQRIHDAQLLTE 107

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R          I  E     + ++       P  +G  +G +R+ ML  G +N+ +    
Sbjct: 108 R-----AMHHNIDLEEI---KAYIDSFRYGAPPHAGGGIGLERVTMLYLGLHNVRQTSMF 159

Query: 346 PFS 348
           P  
Sbjct: 160 PRD 162


>gi|332559281|ref|ZP_08413603.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332276993|gb|EGJ22308.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 591

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 15/172 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ +  SLR       F E  +  +   SP      R F     +    
Sbjct: 134 RREKLHQNMMLRSNVVRSLRNRMWGAGFNEFQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ AG ++ F  A  +R+ +      P +F  L+   +      
Sbjct: 189 GKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDIEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
                   +  A +   Q +F          ++   I   +A   Y +    
Sbjct: 245 ----EQEDVFAAVQPVMQGLFEEFGHGKRVDADWPRIAYRDAMLWYGSDKPD 292



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 15/102 (14%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLA 311
              +++L     EL +       P      FE      +E++++     + +        
Sbjct: 474 HAYQYDLACNGYELISGGIRNHKPEIMFKAFELAGYPKEEVEKRFGGMVKAF-------- 525

Query: 312 CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 526 -RYGAPPHGGCAAGIDRIVMLLADEANIREVIMFPMNQRAED 566


>gi|110678506|ref|YP_681513.1| aspartyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|122972984|sp|Q16B16|SYD_ROSDO RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|109454622|gb|ABG30827.1| aspartyl-tRNA synthetase, putative [Roseobacter denitrificans OCh
           114]
          Length = 591

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 57/172 (33%), Gaps = 15/172 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ + +SLR+   +  F E  +  +   SP      R F     +    
Sbjct: 134 RRANMQANMKLRSDVVASLRQQMWKADFREFQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            +   L  +P+   + L+ +G +K F  A  +R+ +      P +F  L+   +  +   
Sbjct: 189 GRFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDIEMSFVT--- 245

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
                   +    +    ++F           E   I+  +A   Y +    
Sbjct: 246 -----QQDVFDVIQPVLTQVFEQFGNGKAVDQEWPQISYKDAALWYGSDKPD 292



 Score = 76.6 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 53/182 (29%), Gaps = 18/182 (9%)

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDR 240
           D    L    +    +        G+ +   D     F+ I+   I            + 
Sbjct: 394 DAAFFLGGKPKAFETVAGKARNHIGMELGLTDQNRFAFAWIVDFPIYEKDSETGRIDFEH 453

Query: 241 YPAPESA---LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE------KE 291
            P         A           +++L     EL +       P      FE       E
Sbjct: 454 NPFSMPQGGLEALQGDPLSVVGYQYDLSCNGYELVSGAIRNHKPEIMFKAFEIAGYGEDE 513

Query: 292 MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSN 351
           ++++       +             P   G A G DR+VML+    NI EVI  P +Q  
Sbjct: 514 VRKRFGGMVNAFQ---------YGAPPHGGCAAGIDRIVMLLAEEANIREVILFPMNQRA 564

Query: 352 QE 353
           ++
Sbjct: 565 ED 566


>gi|322498851|emb|CBZ33924.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 648

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSL----REYFVENQFIEIDSMS 48
            +P  P+ + +     R            ++  + + S+L    R   +   FIE+ +  
Sbjct: 231 PLPF-PYHDINAKLDTRLNHRVMDLRTEKMIATSRLVSALGQSFRNELLARDFIEVHTPK 289

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L  +  +E     F       D+  +  YL  SP+   + ++     ++F     +R   
Sbjct: 290 LLGAA-SEGGSNVFRV-----DYFERKAYLAQSPQLYKQMMVMGDAMRVFEVGPVFRAEN 343

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
                H  EF  L+     +     + D +  + CA      +          
Sbjct: 344 SLTHRHLTEFVGLDGEMVVKDSHTEVLDVLEPVMCAVLAHLTQQHGNLIDALW 396



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 55/140 (39%), Gaps = 23/140 (16%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP----RFTKRFELYACNIELCN 273
             R L + I+   G++   ++D +P+       + P DP      T+ +++Y    E+C+
Sbjct: 517 QERRLGQLIKERYGVDL-YVIDSFPSSARPFYTM-PVDPSTPDGPTRSYDMYLRGEEICS 574

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE----DFLACL-TEMPQSSGIAMGFDR 328
               +     Q    E+ +  KK        +D+    D++           G  +G +R
Sbjct: 575 GAQRVH----QIELLEQRLSAKK--------VDKVSVKDYVDSFRYGAWPHGGFGLGLER 622

Query: 329 LVMLVTGANNINEVIWTPFS 348
           + +   G ++I +V   P  
Sbjct: 623 IALFFLGLDDIRQVSLFPRD 642


>gi|146094294|ref|XP_001467258.1| aspartyl-trna synthetase [Leishmania infantum JPCM5]
 gi|321399397|emb|CBZ08620.1| putative aspartyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 641

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 3   QIPSQPWWNRDFHYRRR----------PFLLKRNMIQSSL----REYFVENQFIEIDSMS 48
            +P  P+ + +     R            ++  + + S+L    R   +   FIE+ +  
Sbjct: 224 PLPF-PYHDINAKLDTRLNHRVMDLRTEKMIATSRLVSALGQSFRNELLARDFIEVHTPK 282

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L  +  +E     F       D+  +  YL  SP+   + ++     ++F     +R   
Sbjct: 283 LLGAA-SEGGSNVFRV-----DYFERKAYLAQSPQLYKQMMVMGDAMRVFEVGPVFRAEN 336

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN 160
                H  EF  L+     +     + D +  + CA      +          
Sbjct: 337 SLTHRHLTEFVGLDGEMVVKDSHTEVLDVLEPVMCAVLAHLTQQHGNLIDALW 389



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 55/140 (39%), Gaps = 23/140 (16%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP----RFTKRFELYACNIELCN 273
             R L + I+   G++   ++D +P+       + P DP      T+ +++Y    E+C+
Sbjct: 510 QERRLGQLIKERYGVDL-YVIDSFPSSARPFYTM-PVDPSTPDGPTRSYDMYLRGEEICS 567

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE----DFLACL-TEMPQSSGIAMGFDR 328
               +     Q    E+ +  KK        +D+    D++           G  +G +R
Sbjct: 568 GAQRVH----QIELLEQRLSAKK--------VDKVSVKDYVDSFRYGAWPHGGFGLGLER 615

Query: 329 LVMLVTGANNINEVIWTPFS 348
           + +   G ++I +V   P  
Sbjct: 616 IALFFLGLDDIRQVSLFPRD 635


>gi|218506563|ref|ZP_03504441.1| lysyl-tRNA synthetase protein [Rhizobium etli Brasil 5]
          Length = 100

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 50/90 (55%), Positives = 59/90 (65%)

Query: 220 RILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELL 279
               +KIEP+LG    TILD YP  E+ALA     DPR  +RFELYAC +EL N   EL 
Sbjct: 11  ECWSKKIEPHLGFGRITILDEYPVSEAALARPSARDPRVAERFELYACGVELANGFGELT 70

Query: 280 DPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
           +  EQR RFE EM EK ++Y ETYPID+DF
Sbjct: 71  NAAEQRRRFEIEMAEKMRVYGETYPIDDDF 100


>gi|77464390|ref|YP_353894.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|126463232|ref|YP_001044346.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|97196839|sp|Q3IZP1|SYD_RHOS4 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|166225380|sp|A3PMK8|SYD_RHOS1 RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|77388808|gb|ABA79993.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|126104896|gb|ABN77574.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 591

 Score = 78.9 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 15/172 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ +  SLR       F E  +  +   SP      R F     +    
Sbjct: 134 RREKLHQNMMLRSNVVRSLRNRMWGAGFNEFQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ AG ++ F  A  +R+ +      P +F  L+   +      
Sbjct: 189 GKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDIEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
                   +  A +   Q +F          ++   I   +A   Y +    
Sbjct: 245 ----EQEDVFAAVQPVIQGLFEEFGHGKRVDADWPRIAYRDAMLWYGSDKPD 292



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 15/102 (14%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLA 311
              +++L     EL +       P      FE      +E++++     + +        
Sbjct: 474 HAYQYDLACNGYELISGGIRNHKPEIMFKAFELAGYPKEEVEKRFGGMVKAF-------- 525

Query: 312 CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 526 -RYGAPPHGGCAAGIDRIVMLLADEANIREVIMFPMNQRAED 566


>gi|156046677|ref|XP_001589717.1| aspartate-tRNA ligase [Sclerotinia sclerotiorum 1980]
 gi|154693834|gb|EDN93572.1| aspartate-tRNA ligase [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 571

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/363 (14%), Positives = 115/363 (31%), Gaps = 55/363 (15%)

Query: 6   SQPWWNRDFHYR---RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           +    N   H R    +     R  ++    +Y   ++F +     L  +  +E     F
Sbjct: 238 ASHLNNPAMHKRAPVSQAIADIRIAVEDYFCDYLRSHRFKKFHPPCLIGAA-SEGGANVF 296

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                   +  K  YL  SP+F  +  +A G ++++C    +R        H  EF  L+
Sbjct: 297 RMP-----YFDKEAYLAQSPQFYKQFEIAGGRKRVYCVGPVFRAENSNTPRHMTEFIGLD 351

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
                + +   +   +  +          +F F+N+  N   E E I        +   +
Sbjct: 352 LEMEIDEHYHEVLHMLEGV---------LLFIFRNLAENYREEIELIRSIYPSEEFLLPE 402

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
            G  +       + LL  +  +    V+  +  S    + L   +      +   +LD++
Sbjct: 403 AGKEVRLTFAEGQKLLREEGPEEFRNVSDTEDMSTPQEKALGALVRKKFNTD-FYVLDKF 461

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE--KKKI 298
           P           P +P  T  ++      E+ +          QR    ++++E  + K 
Sbjct: 462 PVDARPFYAMPDPENPAVTNAYDFMMRGQEILSGG--------QRLHLPEQLEEVIRSKG 513

Query: 299 YNETYPIDEDFLACLT-------------EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            +   P  ++++                             DR+V       +++ V   
Sbjct: 514 LDPNQPGIKEYVDVFKSVGVPPHGGGGIG-----------LDRVVAWYLNLPSVHLVCDY 562

Query: 346 PFS 348
           P +
Sbjct: 563 PRT 565


>gi|332084295|gb|EGI89498.1| lysyl-tRNA synthetase domain protein [Shigella dysenteriae 155-74]
          Length = 37

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
           MP ++G+ +G DR++ML T ++ I +VI  P  +  +
Sbjct: 1   MPPTAGLGIGIDRMIMLFTNSHTIRDVILFPAMRPQK 37


>gi|221640277|ref|YP_002526539.1| aspartyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254781748|sp|B9KME7|SYD_RHOSK RecName: Full=Aspartyl-tRNA synthetase; AltName:
           Full=Aspartate--tRNA ligase; Short=AspRS
 gi|221161058|gb|ACM02038.1| Aspartyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 591

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 15/172 (8%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              +    ++ R+ +  SLR       F E  +  +   SP      R F     +    
Sbjct: 134 RREKLHQNMMLRSNVVRSLRNRMWGAGFNEFQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ AG ++ F  A  +R+ +      P +F  L+   +      
Sbjct: 189 GKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDIEMSFV---- 244

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
                   +  A +   Q +F          ++   I   +A   Y +    
Sbjct: 245 ----EQEDVFAAVQPVIQGLFEEFGHGKRVEADWPRIAYRDAMLWYGSDKPD 292



 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 15/102 (14%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLA 311
              +++L     EL +       P      FE      +E++++     + +        
Sbjct: 474 HAYQYDLACNGYELISGGIRNHKPEIMFKAFELAGYPKEEVEKRFGGMVKAF-------- 525

Query: 312 CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
                P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 526 -RYGAPPHGGCAAGIDRIVMLLADEANIREVIMFPMNQRAED 566


>gi|297833532|ref|XP_002884648.1| asparaginyl-tRNA synthetase 2 [Arabidopsis lyrata subsp. lyrata]
 gi|297330488|gb|EFH60907.1| asparaginyl-tRNA synthetase 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 86/283 (30%), Gaps = 21/283 (7%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRA 125
             +D   +  YL +S  F  +   +A   K++ F   +   +     H  E   +E   A
Sbjct: 367 FSKDFFGRDAYLTSSGRFHLESYASA-LGKVYTFGPRFIADKIDNARHLAEMWSVETEMA 425

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               +  M       +          F  + +  N   + ++I+          ++   +
Sbjct: 426 FSELDDAMDCADEYFK----------FLCKYILENRDEDMKFISKRVDKTITTRLEATAS 475

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                     ++ L  +    +      W    +   +  +   +      I+  YP   
Sbjct: 476 SSLLRFSYTDVISLLQKATTTKFETKPEWGIALTTEHLSYLTDEIYKGPV-IIHSYPKAV 534

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                    D +    F+L    + +      ++   +   RFE       +        
Sbjct: 535 KQFYVRLNDDKKTVAAFDLVVPKVGV------VITGSQNEERFEILNARIAEFGLSREKF 588

Query: 306 DEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            E +L        + SGI++  +++++  TG  +I + I  P 
Sbjct: 589 -EWYLDLRRHGTVKHSGISLSMEQMLLFATGLPDIKDAIPFPR 630


>gi|289807116|ref|ZP_06537745.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 106

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 46/103 (44%)

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
            + +   +YL+ +PE   K+L+  G E++F     +RN      H PEFTM+E Y A+  
Sbjct: 3   HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYAD 62

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVA 171
           Y+ L++   ++ R  A+                F +P   T  
Sbjct: 63  YKDLIELTESLFRTLAQDVLGTTQVPYGDEVFDFGKPLRKTDH 105


>gi|322695320|gb|EFY87130.1| aspartyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 553

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 98/350 (28%), Gaps = 66/350 (18%)

Query: 14  FHYR---RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQD 70
            H R   ++     R  ++   R Y     F E +   L  +  +E     F        
Sbjct: 231 MHKRAPVQQAIADIRIEVKRLFRSYLESRGFKEFEPPCLIGAA-SEGGGNVFR-----LA 284

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           +  +  +L  SP+F  +  +A G E++F     +R        H  EFT L+     +  
Sbjct: 285 YFGEEAFLAQSPQFYKQFEIAGGRERVFSIGPVFRAENSNTPRHMTEFTGLDLEMEIKDS 344

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              +   +  +                           +            + G  +   
Sbjct: 345 YTEVLSILEGV------------------LLSIFRGIQVRSVYHSEPLLLPEPGKEVRLT 386

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
               + LL  +       V  D+  S    + L + +      +   ++D++P       
Sbjct: 387 FAEAQKLLREEGPPEFANVRDDEDMSTPQEKALGQVVRAKYKTD-FFVVDKFPETARPFY 445

Query: 250 NIYP-------ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNET 302
                         R T  ++++    E+ +    + DP+E   R       + K  +  
Sbjct: 446 AKLDDAGTTVGDGVRVTNAYDMFLRGQEVLSGGQRIHDPVELEAR------IRAKGVDPK 499

Query: 303 YPIDEDFLACLT-------------EMPQSSGIAMGFDRLVMLVTGANNI 339
               +++L                             DR+V  + G  ++
Sbjct: 500 SGGIKEYLTTFQQVGVPPHGGGGIG-----------LDRVVAWILGLPSV 538


>gi|213647141|ref|ZP_03377194.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 284

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 21/157 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LH 113
                         +D   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 185 ENLPRNDQGRVDFDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRH 243

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK 150
             EF MLE   A    E   +    +++   +   ++
Sbjct: 244 LAEFWMLEPEVAFADLEDNARLAEAMLKYVFKAVLEE 280


>gi|254459898|ref|ZP_05073314.1| aspartyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206676487|gb|EDZ40974.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 591

 Score = 78.5 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 51/161 (31%), Gaps = 16/161 (9%)

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
              Q   +       ++ I    + E  E    I+        P       N  P D   
Sbjct: 416 EIGQALKLIDEDRFAFAWIVDFPMYEADEETGKIDFSHNPFSMPQGGLEALNGDPLDV-L 474

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFE------KEMQEKKKIYNETYPIDEDFLAC 312
             +++L     EL +       P      FE       E++++       +         
Sbjct: 475 GYQYDLACNGYELISGAIRNHQPDIMFKAFELAGYGKDEVEKRFGGMVNAFQ-------- 526

Query: 313 LTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
               P   G A G DR+VML+    NI EVI  P +Q  ++
Sbjct: 527 -YGAPPHGGCAAGIDRIVMLLADEANIREVIMFPMNQRAED 566



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 63/197 (31%), Gaps = 7/197 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
              + +  +  R+ + +S+R+   +  F E  +  +   SP      R F          
Sbjct: 134 RREKLQRNMTLRSDVVASMRKRMWDQNFREYQTPIITASSPEG---ARDFLVPSRQH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +    E 
Sbjct: 189 GKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVEQED 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      ++    E         Q      + +      ++       I +    ++   
Sbjct: 249 VFNTIQPVVGGIFEEFGGGRKVDQTWEQISYKDAALWYGSDKPDLRNPIKMQVVSEHFAG 308

Query: 192 PDRHLLYLQAQQAGIRV 208
               +     +Q G  +
Sbjct: 309 SGFAIFAKLLEQDGTEI 325


>gi|110589282|gb|ABG77150.1| lysyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 283

 Score = 78.5 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 13/67 (19%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R  +   +R Y     F+E+++ 
Sbjct: 148 LRPLPEKFHGITDQELRYRQRYVDLIMNEDSRRTFRIRTQVVQFIRNYLNGRGFMEVETP 207

Query: 48  SLQYSPG 54
            +Q  PG
Sbjct: 208 MMQVIPG 214


>gi|126732724|ref|ZP_01748520.1| aspartyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126706854|gb|EBA05924.1| aspartyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 593

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 47/143 (32%), Gaps = 10/143 (6%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFT--KRFELYACNIEL 271
           ++ I    + EK E    I+        P            DP      +++L     EL
Sbjct: 433 FAWIVDFPIYEKDEETGEIDFEHNPFSMPQ---GGMEALQGDPMAVKGYQYDLACNGYEL 489

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLV 330
            +       P      FE          +E                P   G A G DR+V
Sbjct: 490 VSGAIRNHKPEVMLKAFE----LAGYGADEVKARFGALFNAFHYGAPPHGGCAAGIDRIV 545

Query: 331 MLVTGANNINEVIWTPFSQSNQE 353
           ML+ G +NI EVI  P +Q  ++
Sbjct: 546 MLLAGTSNIREVIMFPMNQRAED 568



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 58/187 (31%), Gaps = 14/187 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNETHIRAFSTELIIQDHI 72
                +  +  R+ + +S+R    +  F E  +  +   SP      R F     +    
Sbjct: 134 RRENMQRNMTLRSDVVASMRRRMWDKGFREYQTPIITASSPEG---ARDFLVPSRLH--P 188

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQP-EFTMLEWYRAHESYEQ 131
            K   L  +P+   + ++ +G +K F  A  +R+ +      P +F  L+   +    + 
Sbjct: 189 GKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLEMSFVEQQD 248

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +      +I    E                      I   EA  +Y   D     +  + 
Sbjct: 249 VFDTISPVIAGVFEEFGGGKSVDAPET------WPQIPYKEAALKY-GTDKPDLRNPIEM 301

Query: 192 PDRHLLY 198
            D    +
Sbjct: 302 QDVSEHF 308


>gi|154337170|ref|XP_001564818.1| aspartyl-trna synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061856|emb|CAM38893.1| putative aspartyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 644

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 54/155 (34%), Gaps = 22/155 (14%)

Query: 3   QIPSQPWWNRDFHYRRR---PFLLKR-------NMIQSSL----REYFVENQFIEIDSMS 48
            +P  P+ + +     R     +  R       + + S+L    R   +   FIE+ +  
Sbjct: 225 PLPF-PYHDTNTKLDTRLNHRVMDLRTEQMAATSRLVSALGQSFRNELLALDFIEVHTPK 283

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L  +  +E     F       D+  +  YL  SP+   + +L     ++F     +R  +
Sbjct: 284 LLGAA-SEGGSNVFQV-----DYFDRKAYLAQSPQLHKQMMLMGDAMRVFEVGPVFRAEK 337

Query: 109 Q-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
                H  EF  L+     +     + D +  + C
Sbjct: 338 SLTHRHLTEFIGLDGEMVIKDSHTEVLDVLEPVMC 372



 Score = 75.8 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 54/136 (39%), Gaps = 15/136 (11%)

Query: 218 FSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP----RFTKRFELYACNIELCN 273
             R L + I+   G++   ++D +P+       + P DP      T+ +++Y    E+C+
Sbjct: 513 QERRLGQLIKERYGVDL-YVVDGFPSSARPFYTM-PVDPSTPDGPTRSYDMYLRGEEICS 570

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVML 332
               + +      R   +  ++  +        +D++           G  +G +R+ +L
Sbjct: 571 GAQRVHEIELLEQRLLAKRVDRVGL--------KDYVDSFRYGAWPHGGFGLGLERIALL 622

Query: 333 VTGANNINEVIWTPFS 348
             G N+I +V   P  
Sbjct: 623 FLGLNDIRQVSLFPRD 638


>gi|169842655|ref|ZP_02875760.1| lysyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7a]
          Length = 60

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIW 344
           D++  L   MP + G+ +G DRLVML T + +I +V+ 
Sbjct: 19  DYIRALEYGMPPAGGLGIGIDRLVMLQTNSASIRDVML 56


>gi|218513947|ref|ZP_03510787.1| aspartyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 281

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 43/157 (27%), Gaps = 11/157 (7%)

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                  ++  +          I      E  +    ++        P            
Sbjct: 130 EARTKAGEELNLVDRDRFELCWIVDFPFFEWNDEEKKVDFAHNPFSMPQGGLDALTNQDP 189

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF---LA 311
                 +++      E+ +       P       E  +   +K+      +++ F     
Sbjct: 190 LTIKAFQYDAVCNGFEIASGSIRNQSP-------ETMVAAFEKVGLSQQDVEDRFGGLYR 242

Query: 312 CL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 P   G A G DR+VML+ GA N+ E+   P 
Sbjct: 243 AFQYGAPPHGGAAFGIDRIVMLLVGAKNLREISLFPM 279


>gi|167948502|ref|ZP_02535576.1| Lysyl-tRNA synthetase class II [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 279

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 13/67 (19%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     +++  YR+R                R  +   +R Y     F+E+++ 
Sbjct: 144 LRPLPEKFHGITDQELRYRQRYVDLIMNEDSRRTFRIRTQVVQFIRNYLNGRGFMEVETP 203

Query: 48  SLQYSPG 54
            +Q  PG
Sbjct: 204 MMQVIPG 210


>gi|76664791|emb|CAJ17835.1| aspartyl-tRNA synthetase [Candidatus Phytoplasma solani]
          Length = 59

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 26/38 (68%)

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            P   G+A+G DRLVML+T  NNI +VI  P +QS ++
Sbjct: 1   TPPHGGLALGLDRLVMLLTKTNNIKDVIAFPKTQSAKD 38


>gi|149570626|ref|XP_001520052.1| PREDICTED: similar to asparaginyl-tRNA synthetase, partial
           [Ornithorhynchus anatinus]
          Length = 224

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 56/157 (35%), Gaps = 12/157 (7%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
               R+ +    RE+F +  + EI   +L      G  T        L   D+  +  +L
Sbjct: 52  IFKARSAVTRCFREHFFDRGYCEITPPTLVQTQVEGGAT--------LFKLDYFGEEAFL 103

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +   +  + A    +FC A ++R  +     H  E+T +E      +++ ++    
Sbjct: 104 TQSSQLYLETCIPA-LGDVFCIAQSYRAEQSRTRRHLAEYTHIEAECPFLTFDDMLNRLE 162

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
           +++    +   +   +    + NP  +P         
Sbjct: 163 DLVCDVVDRVLKSPAASLVYDLNPGFKPPKRPFKRMN 199


>gi|257487125|ref|ZP_05641166.1| lysyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 206

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 13/62 (20%)

Query: 1   MHQIPSQPWWNRDF--HYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +     D    YR+R                R+ + + +R + ++  F+E+++ 
Sbjct: 145 LRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFRVRSQVIAHIRSFLMKRDFLEVETP 204

Query: 48  SL 49
            L
Sbjct: 205 ML 206


>gi|1435180|emb|CAA61904.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
          Length = 109

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 10/111 (9%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            YP    A       D +             L     E++   ++  R +       ++ 
Sbjct: 1   NYPKEIKAFYMRLNEDGKTVAAM------DVLAPGIGEIIGGSQREERLDVLDARMAEMG 54

Query: 300 NETYPIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 D  + + L        SG  +GF+RL+  VTG  N+ +VI  P +
Sbjct: 55  L--NKEDYWWYSDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRT 103


>gi|154322360|ref|XP_001560495.1| hypothetical protein BC1G_01327 [Botryotinia fuckeliana B05.10]
 gi|150850574|gb|EDN25767.1| hypothetical protein BC1G_01327 [Botryotinia fuckeliana B05.10]
          Length = 454

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/363 (14%), Positives = 114/363 (31%), Gaps = 55/363 (15%)

Query: 6   SQPWWNRDFHYR---RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           +    N   H R    +     R  ++    +Y   ++F +     L  +  +E     F
Sbjct: 121 ASHLNNPAMHKRAPVSQAIADIRIAVEDYFCDYLRSHRFKKFHPPCLIGAA-SEGGANVF 179

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
                   +  K  YL  SP+F  +  +A G ++++C    +R        H  EF  L+
Sbjct: 180 RMP-----YFDKEAYLAQSPQFYKQFEIAGGRKRVYCVGPVFRAENSNTPRHMTEFIGLD 234

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
                + +   +   +  +          +F F+N+  N   E E +        +   +
Sbjct: 235 LEMEIDEHYHEVLHMLEGV---------LLFIFRNLAENYREEIELVRSIYPSEEFLLPE 285

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
            G  +       + LL  +  +    V   +  S    + L   +      +   +LD++
Sbjct: 286 AGKEVRLTFAEGQKLLREEGPEEFRNVTDTEDMSTPQEKALGALVRKKFNTD-FYVLDKF 344

Query: 242 PAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE--KKKI 298
           P           P +P  T  ++      E+ +          QR    ++++E  + K 
Sbjct: 345 PVDARPFYAMPDPENPAVTNAYDFMMRGQEILSGG--------QRLHLPEQLEEVIRSKG 396

Query: 299 YNETYPIDEDFLACLT-------------EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            +   P  ++++                             DR+V       +++ V   
Sbjct: 397 LDPNQPGIKEYVDVFKSVGVPPHGGGGIG-----------LDRVVAWYLNLPSVHLVCDY 445

Query: 346 PFS 348
           P +
Sbjct: 446 PRT 448


>gi|207111250|ref|ZP_03245412.1| lysyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 58

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 19 RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP 75
          +    KR++I SS+R++F    F+E+++  +   PG   + R F T     + +   
Sbjct: 6  KDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGA-NARPFIT---YHNALEVE 58


>gi|154305343|ref|XP_001553074.1| hypothetical protein BC1G_08966 [Botryotinia fuckeliana B05.10]
 gi|150853708|gb|EDN28900.1| hypothetical protein BC1G_08966 [Botryotinia fuckeliana B05.10]
          Length = 524

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 10/123 (8%)

Query: 228 PNLGINCCTILDRYPAPESALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
                    ILD++PA          P D RFT  F+++    E+      + D      
Sbjct: 49  KEKYHTDYYILDKFPASVRPFYTMPDPEDDRFTNSFDIFMRGQEILTGGQRIHDAEFLEK 108

Query: 287 RFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           R ++     K +  E+     ++L       P  +G  +G +RL  L     NI      
Sbjct: 109 RMKQ-----KGVKPESM---SEYLEGFRWGAPPHAGCGIGLERLTYLFLSLGNIRLASLF 160

Query: 346 PFS 348
           P  
Sbjct: 161 PRD 163


>gi|240274904|gb|EER38419.1| asparaginyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 508

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 79/257 (30%), Gaps = 38/257 (14%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHI 59
           +    Y  R            +  R     + R+ F E   +E+   S+  +     + +
Sbjct: 257 DPHTLYDNRHLVLRGETSSSVMKVRAATLRAFRKVFEEKGILEVTPPSMVQTQVEGGSTL 316

Query: 60  RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFT 118
             F       D+  +  YL  S +   +  L +    +FC   ++R  +     H  E+T
Sbjct: 317 FEF-------DYYGEKAYLTQSSQLYLETCLPS-LGDVFCICPSFRAEKSLTRRHLSEYT 368

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            +E      S+  L+    ++I    EVA  +    + V       PE+   +  F R  
Sbjct: 369 HVEAELDFISFTDLLDHLEDMICRVIEVALSEPLIARYVKQLN---PEFTPPSRPFKRMK 425

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             +    L   D  +                +  T+ D  +     K+   +  N    L
Sbjct: 426 YSEAIQWLREHDILNEE-------------GNQHTFGDDIAEAAERKMTDMM--NMPIFL 470

Query: 239 DRYPAPESALANIYPAD 255
             +P    A       +
Sbjct: 471 THFPVEIKAFYMRKDPE 487


>gi|85000937|ref|XP_955187.1| aspartyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65303333|emb|CAI75711.1| aspartyl-tRNA synthetase, putative [Theileria annulata]
          Length = 629

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 47/141 (33%), Gaps = 17/141 (12%)

Query: 11  NRDFHYRRRP----------FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIR 60
           N+D     R               ++++    RE+ + N FIEI +  L           
Sbjct: 172 NQDTRLDNRALDLRCFMNNIIFKIQSIVCQLYREFLLSNDFIEIHTPKLLS------GSS 225

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
              + +    +  +   L  SP+   +  +    +++F     +R        H  E+  
Sbjct: 226 EGGSSVFKFKYFEQDACLAQSPQLYKQMAICGDLKRVFEIGPVFRAENSNTHRHLCEYVG 285

Query: 120 LEWYRAHESYEQLMKDCMNII 140
           L+     ++    + + ++ +
Sbjct: 286 LDLEMELKNNYMEVVNLIDEM 306



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 17/96 (17%)

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID----EDFLACL 313
           +++ ++ +    E+ +    + D  E   R       K+        ID    +D++   
Sbjct: 498 WSRSYDFFMRGEEILSGAQRIHDSEELEKR------AKECG------IDVNTIKDYIQVF 545

Query: 314 TEMP-QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                  +G  +G +R+VML  G  NI +    P  
Sbjct: 546 KYASFPHAGAGIGLERVVMLFLGLTNIRKTSMFPRD 581


>gi|297744949|emb|CBI38541.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/275 (11%), Positives = 71/275 (25%), Gaps = 37/275 (13%)

Query: 14  FHYRRRPFLL---KR--NMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H+R R  ++    R  N +  +   +F+ + F+   +  +  S       +  F    +
Sbjct: 170 VHFRSRTNMIPAVARICNALAYATHTFFLNHGFLHAHTPIITTSDCEGAGEM--FQVTTL 227

Query: 68  IQDH------------------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE- 108
           I D                     +  +L  S +   +    A    ++ F   +R    
Sbjct: 228 ISDAEKPGIPQKDGKIDYSQDFFARQAFLTVSGQLQVETHACA-IGSVYTFGPTFRAEHS 286

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
               H  EF M+E   A    +  M      ++   +                  E    
Sbjct: 287 HTSRHLAEFWMVEPEIAFADLKDDMNCAEAYVKFLCQWLPDNCIDD--------MEFMAK 338

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
              +    +  +      +     +   L  +A +   +  +   W    +         
Sbjct: 339 NFDKGSIDHLRMVASMPFERISYAEAIKLLEEAVKKDKKFENKVEWGIDLASEHERFSAE 398

Query: 229 NLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            +      I+  YP    A       D +     +
Sbjct: 399 -VLFKKLVIVHDYPRGIKAFYMRLNDDMKTVAADK 432


>gi|326513972|dbj|BAJ92136.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 298

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 59/182 (32%), Gaps = 21/182 (11%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETH 58
           ++D     RP               + +++  RE+     FI I +  L    S G  + 
Sbjct: 47  HQDTRLNYRPIDIRTPANLSTFSIEHHVENKFREFLFSKNFIGIHTPKLIGGSSEGGAS- 105

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  +   D+  +P  L  SP+   +  +  G  ++F     +R  +     H  EF
Sbjct: 106 -------VFKLDYNGQPACLAQSPQLYKQMAICGGFGRVFEVGSIFRAEKSNTHRHLCEF 158

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
             L+     + +   + D ++ +  A      +    +    N  +  E +T      + 
Sbjct: 159 IGLDAEMEIKEHYFEVCDIIDGLFVAIFDHLNEHCKEELKEINRQNPFEPLTYLVQTLKL 218

Query: 178 AN 179
             
Sbjct: 219 TY 220


>gi|149916|gb|AAA25350.1| ORFI [Mycobacterium leprae]
          Length = 59

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQS 350
           +DE+FLA L   MP  +G  MG DRL+M +TG  +I E +  P  + 
Sbjct: 11  LDEEFLAALEYAMPPCTGTGMGIDRLLMSLTGL-SIRETVLFPIVRP 56


>gi|666876|gb|AAB41345.1| aspS [Chlamydophila caviae]
          Length = 99

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            F+  L+   P   GIA+G DR++M++TGA  I EVI  P +Q   +
Sbjct: 30  FFIDALSFGTPPHLGIALGLDRIMMVLTGAEGIREVIAFPKTQKAAD 76


>gi|23012229|ref|ZP_00052366.1| COG0173: Aspartyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 497

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 27/167 (16%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK- 260
            +  +       +  +    + E  E    I+        P  +              + 
Sbjct: 315 DELKLSDTDQFAFCWVVDFPMYEWNEEEKRIDFSHNPFSMPNFDRDEFLA--LGEGDAEK 372

Query: 261 -------RFELYACNIELCNACDELLDPIEQRHRF------EKEMQEKKKIYNETYPIDE 307
                  ++++    IEL +       P      F      +  ++EK            
Sbjct: 373 ILGIKAFQYDIVCNGIELSSGAIRNHRPDVMEKAFSIAGYGKDVLEEKFGGM-------- 424

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
             L  L    P   GIA G DR+VML+    NI EV+  P +Q  ++
Sbjct: 425 --LNALRLGAPPHGGIAPGVDRIVMLLCHEPNIREVVLFPMNQRAED 469



 Score = 53.5 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 47/144 (32%), Gaps = 17/144 (11%)

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
           SP     ++            + +      +P+   +  + AG ++ F  A  +R+ +  
Sbjct: 66  SPEGARDYLVPSRVHPGKFYALPQ------APQQFKQLTMIAGFDRYFQIAPCFRDEDAR 119

Query: 111 CLHQP-EFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT 169
               P EF  L+   +  + E + +    ++R         +F               IT
Sbjct: 120 ADRSPGEFYQLDIEMSFVTQEDVFQAVEPVLRG--------VFEEFAEGKRVTPVFPRIT 171

Query: 170 VAEAFARYANIDLGTTLDNPDQPD 193
            A+A  +Y  +D     +     D
Sbjct: 172 YADAMLKY-GVDKPDLRNPLIIAD 194


>gi|145641686|ref|ZP_01797263.1| asparaginyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145273733|gb|EDK13602.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 345

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 68/208 (32%), Gaps = 24/208 (11%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R  +       R+ +  ++  +F E  F  + +  +  S       +   ST   
Sbjct: 126 AHLRPRTNIIGAVARVRHCLSQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTLDL 185

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K  +L  S + + +    A   KI+ F   +R        H
Sbjct: 186 ENLPRGENGKVDFSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRH 244

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
             EF M+E   A  +     K   ++++        +             + + IT  E 
Sbjct: 245 LAEFWMVEPEVAFATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDK-DVITRLEN 303

Query: 174 F--ARYANIDLGTTLDNPDQPDRHLLYL 199
           F  + +A ID    +D   +  ++L  L
Sbjct: 304 FVNSDFAQIDYTDAIDVLLKSGKNLNSL 331


>gi|226362991|ref|YP_002780773.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226241480|dbj|BAH51828.1| aspartyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 241

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 11/155 (7%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
           L + +A         +   +    R+L +  +     +    ++ YPA +     +  P+
Sbjct: 90  LHFAEALDLVGAPPDEPDLTPEHERLLGKWAKSQFDSD-FLAVEEYPAVKRPFYTHPQPS 148

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL- 313
           D R+T  F+L    +EL      L +  +             +  +        +L  + 
Sbjct: 149 DQRWTNSFDLLFRGLELVTGGQRLHNHADYT------AALAARGEDPAAYSP--YLEAMG 200

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             MP   G A+G +R V  +  A+NI      P  
Sbjct: 201 HGMPPHGGFAIGLERWVSRLLQADNIRYATLFPRD 235


>gi|326500930|dbj|BAJ95131.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 285

 Score = 76.2 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 59/182 (32%), Gaps = 21/182 (11%)

Query: 11  NRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ--YSPGNETH 58
           ++D     RP               + +++  RE+     FI I +  L    S G  + 
Sbjct: 48  HQDTRLNYRPIDIRTPANLSTFSIEHHVENKFREFLFSKNFIGIHTPKLIGGSSEGGAS- 106

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  +   D+  +P  L  SP+   +  +  G  ++F     +R  +     H  EF
Sbjct: 107 -------VFKLDYNGQPACLAQSPQLYKQMAICGGFGRVFEVGSIFRAEKSNTHRHLCEF 159

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
             L+     + +   + D ++ +  A      +    +    N  +  E +T      + 
Sbjct: 160 IGLDAEMEIKEHYFEVCDIIDGLFVAIFDHLNEHCKEELKEINRQNPFEPLTYLVQTLKL 219

Query: 178 AN 179
             
Sbjct: 220 TY 221


>gi|302556541|ref|ZP_07308883.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302474159|gb|EFL37252.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 292

 Score = 75.8 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 106/326 (32%), Gaps = 63/326 (19%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           + +  +LR+      F E+ + +++        +       +  D   + L     P   
Sbjct: 9   SDLLFTLRDTLRAEAFFEVTTPTMRR-----ADLGPGRRLPVDHDG-GRFLRAMIGPAL- 61

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
             ++      ++F     +R  +   LH PEF ML+ Y A E ++ L+     +IR    
Sbjct: 62  --RVNLEHHPRVFEIGACFRPEKPDELHAPEFQMLDLYAAGEDFDFLLALAERLIRPHLP 119

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
            A                 P+ ++VA        ID         +P   L    A   G
Sbjct: 120 YA-----------------PQRVSVAGHIRDQFGID------LHREPLGDLPARMAAHLG 156

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK---RF 262
             ++ D  +  +  + +  ++E          L  YP             P  T    RF
Sbjct: 157 --MSADVPFKRVLGQYVEREVEVQSA-GAALFLTEYP--VGGDEPCARLTPGTTAVLNRF 211

Query: 263 ELYACNIELCNACDELLDPIEQRHRF-------EKEMQEKKKIYNETYPIDEDFLACLTE 315
           E+    IE+ +  ++  D      R        +++   ++ I               T 
Sbjct: 212 EVLVDGIEVVHGYEDEPDGAAFVDRARAVDLYDDEQALAREAID--------------TG 257

Query: 316 MPQSS--GIAMGFDRLVMLVTGANNI 339
              +   G+ +G +RL M  +G  +I
Sbjct: 258 RVPAGSVGLGIGIERLCMAASGVKDI 283


>gi|213584164|ref|ZP_03365990.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 173

 Score = 75.8 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 31/97 (31%), Gaps = 18/97 (18%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
            + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 82  PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 141

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCK 87
           +P     ++            + +      SP+   +
Sbjct: 142 TPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQ 172


>gi|297689832|ref|XP_002822341.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           [Pongo abelii]
          Length = 333

 Score = 75.8 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 40/137 (29%), Gaps = 12/137 (8%)

Query: 214 WSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN 273
           W         + +  + G      +  YP            D        +      L  
Sbjct: 199 WGADLQTEHEKYLVKHCGNIPV-FIINYPLVLKPFYMRDNEDGPQHTVAAV----DLLVP 253

Query: 274 ACDELLDPIEQRHR--FEKEMQEKKKIYN-ETYPIDEDFLACLTEMPQSSGIAMGFDRLV 330
              EL     +  R  F +E   +  +     + +D   L          G  MGF+R +
Sbjct: 254 GVGELFGGGLREERYHFLEERLARSGLTEVYQWYLD---LRRF-GSVPHGGFGMGFERYL 309

Query: 331 MLVTGANNINEVIWTPF 347
             + G +NI +VI  P 
Sbjct: 310 QCILGVDNIKDVIPFPR 326



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 8/70 (11%)

Query: 15  HYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELII 68
           H+R R       L  R+   +++  +F ++ F+ I +  +  +       +  F  E   
Sbjct: 144 HFRCRTNVLGSILRIRSEATAAIHSFFKDSGFVHIHTPIITSNDSEGAGEL--FQLEWGA 201

Query: 69  QDHIRKPLYL 78
                   YL
Sbjct: 202 DLQTEHEKYL 211


>gi|300728330|ref|ZP_07061695.1| asparagine--tRNA ligase [Prevotella bryantii B14]
 gi|299774395|gb|EFI71022.1| asparagine--tRNA ligase [Prevotella bryantii B14]
          Length = 337

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 49/158 (31%), Gaps = 23/158 (14%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R       +  R+ +  ++ +YF E+ F    +  +  S       +  F    +
Sbjct: 120 AHMRLRTNTFGAVMRIRHNMAIAVHKYFHEHGFYYFHTPLITASDAEGAGEM--FQVTTL 177

Query: 68  IQD--------HIRKPLY-----LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
             D           K  +     L  S +   +    A    I+ F   +R        H
Sbjct: 178 DLDRVAKEGKVEYSKDFFGKKTNLTVSGQLEGELGATA-LGAIYTFGPTFRAENSNTPRH 236

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI 151
             EF M+E   A    ++LM    + I+     A    
Sbjct: 237 LAEFWMIEPEVAFMDKDELMDLEEDFIKYCVRWALDNC 274


>gi|238567656|ref|XP_002386283.1| hypothetical protein MPER_15530 [Moniliophthora perniciosa FA553]
 gi|215437786|gb|EEB87213.1| hypothetical protein MPER_15530 [Moniliophthora perniciosa FA553]
          Length = 124

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 2/123 (1%)

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
           + E                        L     +  +  +   T + +  +++ E IEP 
Sbjct: 1   MIETLEEKLGTKFPPGDTLHTDEANKFLRELCVKHNVDCSEPRTNARLLDKLVGEFIEPL 60

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                   +  +P   S LA  + + P   +RFE + C  E+CNA  EL DP EQR RFE
Sbjct: 61  C--ISPAFIVGHPQVMSPLAKWHRSRPGLCERFEGFLCQKEICNAYTELNDPFEQRLRFE 118

Query: 290 KEM 292
           +++
Sbjct: 119 EQV 121


>gi|145633225|ref|ZP_01788956.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144986071|gb|EDJ92661.1| asparaginyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 87

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--TEMPQSSGIAMG 325
              L     E++   ++  R E   +  +++     P D  +   L        SG  +G
Sbjct: 1   MDVLAPGIGEIIGGSQREERLEVLDKRMEEMGL--NPDDYWWYRDLRKYGSVPHSGFGLG 58

Query: 326 FDRLVMLVTGANNINEVIWTPF 347
           F+RL++ VTG  NI +VI  P 
Sbjct: 59  FERLIVYVTGVQNIRDVIPFPR 80


>gi|33322965|gb|AAQ07219.1|AF496527_1 aspartyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis]
          Length = 140

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 8/106 (7%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL-QYSPGNET-HIRAFSTELIIQDH 71
                +  L+ R  I ++   Y     FI I++  L + +P     ++            
Sbjct: 41  RRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLVPSRVYPGSFYA 100

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
           + +      SP+   + L+ AG +K +  A  +R+ +     QPEF
Sbjct: 101 LPQ------SPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQPEF 140


>gi|110589242|gb|ABG77130.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 245

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 18/111 (16%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
           Q+      + +   R R            +  R  +  SLR +  +  F++I++  L   
Sbjct: 137 QLDEHENTSEEVRLRYRYVDLRRPEMLEKIRIRAQVTRSLRRFLDDRAFLDIETPMLTKA 196

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           +P     ++    T         +   L  SP+   + L+ +G ++ +   
Sbjct: 197 TPEGARDYLVPSRTHP------GQFFALPQSPQLFKQLLMMSGMDRYYTGG 241


>gi|213861682|ref|ZP_03386152.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 85

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
            F T     + +   +YL+ +PE   K+L+  G E++F     +RN      H PEFTM+
Sbjct: 6   PFITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMM 62

Query: 121 EWYRAHESYEQLMKDCMNIIR 141
           E Y A+  Y+ L++   ++ R
Sbjct: 63  ELYMAYADYKDLIELTESLFR 83


>gi|149068948|gb|EDM18500.1| rCG64430 [Rattus norvegicus]
          Length = 211

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 52/232 (22%), Gaps = 31/232 (13%)

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           M+E   +     Q +   M  +  A               C+ F         E   +  
Sbjct: 1   MVEAEVSFVESLQDLMQVMEGLFKATTEMVLSHCPEDVELCHQFIASGQKDRLEHMLK-- 58

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
                   +N             +QA         W         + +  + G      +
Sbjct: 59  --------NNFLIISYAEAIEILKQASQNFTFTPKWGVDLQTEHEKYLVRHCGNIPV-FV 109

Query: 239 DRYPAPESALANI---YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
             YP+                       L     EL               R  + +  +
Sbjct: 110 INYPSELKPFYMRENEDDPQNTVAAVDLLVPGVGELFGGSLREERYHVLEQRLARYLDLR 169

Query: 296 KKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           K                        G  MGF+R +  + G +NI +VI  P 
Sbjct: 170 KF-----------------GSVPHGGFGMGFERYLQCILGVDNIKDVIPFPR 204


>gi|12227246|emb|CAC21723.1| asparaginyl-tRNA synthetase-like protein [Staphylococcus aureus]
          Length = 147

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 43/150 (28%), Gaps = 12/150 (8%)

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTK 260
           +        D  W + F       I  +   +    +  YP           P +     
Sbjct: 1   EFLKAEGFDDIEWGEDFGAPHETAIANHY--DLPVFITNYPTKIKPFYMQPNPENEETVL 58

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFE--KEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
             +L A          E++   E+    E  ++  ++  +  E Y    D          
Sbjct: 59  CADLIAP-----EGYGEIIGGSERVDDLELLEQRVKEHGLDEEAYSYYLDLRR--YGSVP 111

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             G  +G +R V  ++G  ++ E    P  
Sbjct: 112 HCGFGLGLERTVAWISGVEHVRETAPFPRL 141


>gi|309799291|ref|ZP_07693538.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308117069|gb|EFO54498.1| aspartyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 254

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 63/192 (32%), Gaps = 11/192 (5%)

Query: 36  FVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
             E +FI++++  L   +P     ++            + +      SP+ + + L+ AG
Sbjct: 1   MDELEFIDVETPFLSKSTPEGARDYLVPSRVNKGHFYALPQ------SPQITKQLLMNAG 54

Query: 94  EEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS 153
            ++ +     +R+ +     QPEFT ++   +  + +++      +I    +       +
Sbjct: 55  FDRYYQIVKCFRDEDLRGDRQPEFTQVDLETSFLTEQEIQDITEGLIARVMKETKGIEVT 114

Query: 154 --FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
             F  +  +           +        DL   +   D           +   ++ A D
Sbjct: 115 LPFPRMKYDDAMAFYGSDKPDTRFEMLLQDLTDLVKGVDFKVFSEAPAV-KAIVVKGAAD 173

Query: 212 DTWSDIFSRILI 223
           +       ++  
Sbjct: 174 NYSRKDIDKMTE 185


>gi|5670317|gb|AAD46682.1|AF170910_1 SYNC2 protein [Arabidopsis thaliana]
          Length = 638

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 83/283 (29%), Gaps = 21/283 (7%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRA 125
             +D   +  YL  S  F  +   +A   K++ F   +   +     H  E   +E   A
Sbjct: 368 FSKDFFGRDTYLTASGRFHLESYASA-LGKVYTFGPRFIADKIDNARHLAEKWNVETEMA 426

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               +  M       +   +   +                ++I+          ++   +
Sbjct: 427 FAELDDAMDCADEYFKFLCKYVLENRDEDM----------KFISKRVDKTITTRLEATAS 476

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                     ++ L  +    +      W    +   +  +   +      +   YP   
Sbjct: 477 SSLLRFSYTEVISLLQKATTTKFETKPEWGVALTTEHLSYLTDEIYKGPVIVHT-YPKAI 535

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                    D +    F+L    + +      ++   +   RFE  +  +      T   
Sbjct: 536 KQFYVRLNDDKKTVAAFDLVVPKVGV------VITGSQNEERFEI-LDARIGESGFTREK 588

Query: 306 DEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            E +L        + SGI++  +++++  TG  +I + I  P 
Sbjct: 589 FEWYLDLRRHGTVKHSGISLSMEQMLLYATGLPDIKDAIPFPR 631


>gi|15231463|ref|NP_187398.1| NS2; asparagine-tRNA ligase [Arabidopsis thaliana]
 gi|20140328|sp|Q9SW95|SYNC2_ARATH RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic 2; AltName:
           Full=Asparagine--tRNA ligase 2; Short=AsnRS 2
 gi|6041857|gb|AAF02166.1|AC009853_26 putative asparaginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332641019|gb|AEE74540.1| asparaginyl-tRNA synthetase, cytoplasmic 2 [Arabidopsis thaliana]
          Length = 638

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 83/283 (29%), Gaps = 21/283 (7%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRA 125
             +D   +  YL  S  F  +   +A   K++ F   +   +     H  E   +E   A
Sbjct: 368 FSKDFFGRDTYLTASGRFHLESYASA-LGKVYTFGPRFIADKIDNARHLAEKWNVETEMA 426

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               +  M       +   +   +                ++I+          ++   +
Sbjct: 427 FAELDDAMDCADEYFKFLCKYVLENRDEDM----------KFISKRVDKTITTRLEATAS 476

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                     ++ L  +    +      W    +   +  +   +      +   YP   
Sbjct: 477 SSLLRFSYTEVISLLQKATTTKFETKPEWGVALTTEHLSYLTDEIYKGPVIVHT-YPKAI 535

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                    D +    F+L    + +      ++   +   RFE  +  +      T   
Sbjct: 536 KQFYVRLNDDKKTVAAFDLVVPKVGV------VITGSQNEERFEI-LDARIGESGFTREK 588

Query: 306 DEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            E +L        + SGI++  +++++  TG  +I + I  P 
Sbjct: 589 FEWYLDLRRHGTVKHSGISLSMEQMLLYATGLPDIKDAIPFPR 631


>gi|167947825|ref|ZP_02534899.1| aspartyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 219

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 39/111 (35%), Gaps = 18/111 (16%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
           Q+      + +   R R            +  R  +  SLR +  +  F++I++  L   
Sbjct: 111 QLDEHENTSEEVRLRYRYVDLRRPEMLEKIRIRAQVTRSLRRFLDDRAFLDIETPMLTKA 170

Query: 52  SPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFA 101
           +P     ++    T         +   L  SP+   + L+ +G ++ +   
Sbjct: 171 TPEGARDYLVPSRTHP------GQFFALPQSPQLFKQLLMMSGMDRYYTGG 215


>gi|70914528|ref|XP_731869.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56502186|emb|CAH84569.1| hypothetical protein PC301116.00.0 [Plasmodium chabaudi chabaudi]
          Length = 112

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 6/108 (5%)

Query: 240 RYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
            YP            D +     ++   NI       E        +  +++M++ K   
Sbjct: 4   NYPDSIKPFYMKLNDDKKTVSCMDVIFPNIGEIAGGSERETN---LNILKEQMKKNKLNI 60

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +   P  E  L         SG  +G DRL+M +   +NI +++  P 
Sbjct: 61  DLYNPYLE--LRK-YGNIPHSGFGLGIDRLIMYILSISNIRDIVPFPR 105


>gi|171682464|ref|XP_001906175.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941191|emb|CAP66841.1| unnamed protein product [Podospora anserina S mat+]
          Length = 489

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/352 (13%), Positives = 105/352 (29%), Gaps = 67/352 (19%)

Query: 22  LLKRNMIQSSL-----------REYFVENQFIEIDSMSLQYSP-GNETHIRAFSTELIIQ 69
           + KR  +Q ++           R Y     F E +  SL  +     ++           
Sbjct: 156 MRKRAPVQQAIADIRMEMKHLFRSYLKARGFKEFEPPSLIGAASEGGSN-------FFRM 208

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHES 128
            +  +  +L  SP+F  +  +A G +++F  A  +R        H  EFT L+       
Sbjct: 209 PYFSQEAFLAQSPQFYKQFEIAGGRKRVFSIAPVFRAENSNTPRHMTEFTGLDLE----- 263

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
               M+   +       +    ++ F+ V+     E E +      +     + G  +  
Sbjct: 264 ----MEIRKDYSEVLYLLEGVLLYIFRQVHRIFKDEIELVRSVYPSSEILLPEPGQEVRL 319

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                + LL  +       V  D+  S    + L   +      +   ++D++P      
Sbjct: 320 MFTQAQQLLREEGPAEFRHVRDDEDMSTPQEKALGALVRQKFNTD-FYVVDKFPETARPF 378

Query: 249 ANIYPADP---------RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
                            + T  F+++    E+ +    +  P E   R       + K  
Sbjct: 379 YAKLDDTAAAGSAEGAVKVTNAFDMFLRGQEILSGGQRINHPDELEAR------IRAKGI 432

Query: 300 NETYPIDEDFLACLTE------------MPQSSGIAMGFDRLVMLVTGANNI 339
           +   P  + ++    +                       DR+V    G  ++
Sbjct: 433 DPASPGIDGYVQVFRQVGVPPHGGGGIG----------LDRIVAWYLGLPSV 474


>gi|256062283|ref|XP_002570298.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|227294225|emb|CAY19127.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 218

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 307 EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E FL  L +  P   GIA+G D L+ +   A +I +VI  P
Sbjct: 144 EYFLTALNSGAPPHGGIALGLDLLIAIFVNAKSIRDVIAFP 184


>gi|26449530|dbj|BAC41891.1| putative asparaginyl-tRNA synthetase [Arabidopsis thaliana]
 gi|29028996|gb|AAO64877.1| At3g07420 [Arabidopsis thaliana]
          Length = 638

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/283 (12%), Positives = 80/283 (28%), Gaps = 21/283 (7%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRA 125
             +D   +  YL  S  F  +   +A   K++ F   +   +     H  E   +E   A
Sbjct: 368 FSKDFFGRDTYLTASGRFHLESYASA-LGKVYTFGPRFIADKIDNARHLAEKWNVETEMA 426

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               +  M       +   +   +              +               ++   +
Sbjct: 427 FAELDDAMDCADEYFKFLCKYVLENRDEDMKFILKRVDKTIT----------TRLEATAS 476

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                     ++ L  +    +      W    +   +  +   +      +   YP   
Sbjct: 477 SSLLRFSYTEVISLLQKATTTKFETKPEWGVALTTEHLSYLTDEIYKGPVIVHT-YPKAI 535

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                    D +    F+L    + +      ++   +   RFE  +  +      T   
Sbjct: 536 KQFYVRLNDDKKTVAAFDLVVPKVGV------VITGSQNEERFEI-LDARIGESGFTREK 588

Query: 306 DEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            E +L        + SGI++  +++++  TG  +I + I  P 
Sbjct: 589 FEWYLDLRRHGTVKHSGISLSMEQMLLYATGLPDIKDAIPFPR 631


>gi|207109981|ref|ZP_03244143.1| lysyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 139

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 2/99 (2%)

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                 L     + G++V  + T+  + +      +E    +   T + +YP   S LA 
Sbjct: 42  LEKEDRLLAYLLEQGVKVEPNLTYGKLLAEAFDHFVEHK--LINPTFVTQYPIEISPLAR 99

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
              ++P    RFEL+    E+ N   EL DP++Q  RF+
Sbjct: 100 RNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFK 138


>gi|13752518|gb|AAK38703.1|AF359587_1 aspartyl-tRNA synthetase [Oryzias latipes]
          Length = 95

 Score = 73.1 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 39/97 (40%), Gaps = 9/97 (9%)

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
           P +P+++  ++++    E+ +    + D      R      +  +I  E     + ++  
Sbjct: 1   PHNPKYSNSYDMFMRGEEILSGAQRVHDAQLLTER-----AQHHQIDLEKI---KSYIDS 52

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                P  +G  +G +R+ ML  G +N+ +    P  
Sbjct: 53  FRYGAPPHAGGGIGLERVCMLYLGLHNVRQTSMFPRD 89


>gi|255584642|ref|XP_002533044.1| lysyl-tRNA synthetase, putative [Ricinus communis]
 gi|223527163|gb|EEF29334.1| lysyl-tRNA synthetase, putative [Ricinus communis]
          Length = 58

 Score = 73.1 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 3/54 (5%)

Query: 299 YNETYP--IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +++Y   +D+DFL  L   MP++SG+  G DRLV+L+T + +I +VI  P  +
Sbjct: 3   DDDSYEVTLDDDFLTALEYGMPRTSGMRFGIDRLVVLLTNSASILDVIAFPMLK 56


>gi|2664212|emb|CAA10905.1| asparaginyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 276

 Score = 73.1 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 83/283 (29%), Gaps = 21/283 (7%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRA 125
             +D   +  YL  S  F  +   +A   K++ F   +   +     H  E   +E   A
Sbjct: 6   FSKDFFGRDTYLTASGRFHLESYASA-LGKVYTFGPRFIADKIDNARHLAEKWNVETEMA 64

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
               +  M       +   +   +                ++I+          ++   +
Sbjct: 65  FAELDDAMDCADEYFKFLCKYVLENRDEDM----------KFISKRVDKTITTRLEATAS 114

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                     ++ L  +    +      W    +   +  +   +      +   YP   
Sbjct: 115 SSLLRFSYTEVISLLQKATTTKFETKPEWGVALTTEHLSYLTDEIYKGPVIVHT-YPKAI 173

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                    D +    F+L    + +      ++   +   RFE  +  +      T   
Sbjct: 174 KQFYVRLNDDKKTVAAFDLVVPKVGV------VITGSQNEERFEI-LDARIGESGFTREK 226

Query: 306 DEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            E +L        + SGI++  +++++  TG  +I + I  P 
Sbjct: 227 FEWYLDLRRHGTVKHSGISLSMEQMLLYATGLPDIKDAIPFPR 269


>gi|71893848|ref|YP_279294.1| asparagine synthetase A [Mycoplasma hyopneumoniae J]
          Length = 320

 Score = 72.8 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 100/334 (29%), Gaps = 37/334 (11%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI--RAFSTELIIQDHIRKPLYL 78
            L   + I     ++  +N    ++      S  +   +   +   ++I +++     YL
Sbjct: 9   ILTIYSEINFLTYKWMRDNNVKIVNCPITTQSISSPMGLGSDSLPYKVISKNNPNFEFYL 68

Query: 79  QTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +F  +  L     E +   A  +R       H  +F   E     +   +  K  +
Sbjct: 69  ADSMQFHLELFLRTKNVESVGYIAPTFRGENVDERHLHQFNHFEIE-TKKPLVETKKMII 127

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSE--PEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
           N ++   +   +   +  N           +++   +    + N          +  DR 
Sbjct: 128 NYLKYLVKNLVKTHSAELNYFNENNVPRLLKWLNFDQYNLLFTNAIKILDEKFKEGIDRT 187

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L     G +   +     I                    LD +P   +        D
Sbjct: 188 ELLLNINSKGEKFLINYFSDKIL------------------WLDNFP-EINVPFYQKSKD 228

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE-DFLACLT 314
                   L      + +              F+     K  + ++  P +   +L    
Sbjct: 229 GFAINSDLLMGIGEIVGSG----------ERCFDYNETLKSLLNHKNNPQNYKWYLEMKE 278

Query: 315 EMPQ-SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + P  +SG  +G +RL++ + G N+I EV   P 
Sbjct: 279 KTPMITSGFGLGMERLMLFLIGKNDIREVQLIPR 312


>gi|298204640|emb|CBI23915.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/210 (10%), Positives = 56/210 (26%), Gaps = 14/210 (6%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELIIQDHIRKPLYLQTSPEF 84
           N +  +   +F  + F+   +  +  S       +  F  +   QD   +  +   S + 
Sbjct: 243 NALAYATHTFFQNHGFLHAHTPIITTSDCEGAGEM--FQIDY-SQDFFARQAFFTVSGQL 299

Query: 85  SCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
             +    A    ++ F   +R        H  EF M+E   A    +  M      ++  
Sbjct: 300 QVETYACA-IGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADLKDDMNCAEAYVKFL 358

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
            +                  E       +    +  +      +     +   L  +A +
Sbjct: 359 CQWLPDNCIDD--------MEFMAKIFDKGSIDHLRMVASMPFERISYAEAIKLLEEAVK 410

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
              +  +   W    +    + +    G  
Sbjct: 411 KDKKFENKVEWGIDLASEHDQILASRQGHI 440


>gi|54020547|ref|YP_116007.1| asparagine synthetase A [Mycoplasma hyopneumoniae 232]
 gi|53987720|gb|AAV27921.1| asparaginyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|144227664|gb|AAZ44583.2| conserved hypothetical protein [Mycoplasma hyopneumoniae J]
          Length = 351

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 100/334 (29%), Gaps = 37/334 (11%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI--RAFSTELIIQDHIRKPLYL 78
            L   + I     ++  +N    ++      S  +   +   +   ++I +++     YL
Sbjct: 40  ILTIYSEINFLTYKWMRDNNVKIVNCPITTQSISSPMGLGSDSLPYKVISKNNPNFEFYL 99

Query: 79  QTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +F  +  L     E +   A  +R       H  +F   E     +   +  K  +
Sbjct: 100 ADSMQFHLELFLRTKNVESVGYIAPTFRGENVDERHLHQFNHFEIE-TKKPLVETKKMII 158

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSE--PEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
           N ++   +   +   +  N           +++   +    + N          +  DR 
Sbjct: 159 NYLKYLVKNLVKTHSAELNYFNENNVPRLLKWLNFDQYNLLFTNAIKILDEKFKEGIDRT 218

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L     G +   +     I                    LD +P   +        D
Sbjct: 219 ELLLNINSKGEKFLINYFSDKIL------------------WLDNFP-EINVPFYQKSKD 259

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE-DFLACLT 314
                   L      + +              F+     K  + ++  P +   +L    
Sbjct: 260 GFAINSDLLMGIGEIVGSG----------ERCFDYNETLKSLLNHKNNPQNYKWYLEMKE 309

Query: 315 EMPQ-SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + P  +SG  +G +RL++ + G N+I EV   P 
Sbjct: 310 KTPMITSGFGLGMERLMLFLIGKNDIREVQLIPR 343


>gi|55730753|emb|CAH92097.1| hypothetical protein [Pongo abelii]
          Length = 120

 Score = 72.4 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 8/103 (7%)

Query: 22  LLKRNMIQSSLREYFVE-NQFIEIDSMSL-QYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           L  R+ +   +REY    + F+ I++ +L + +PG     + F               L 
Sbjct: 20  LRLRSQMVMKMREYLCNLHGFVGIETPTLFKRTPGGA---KEFLVPSREPGKF---YSLP 73

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
            SP+   + L+  G ++ F  A  +R+       QPEFT    
Sbjct: 74  QSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQTRL 116


>gi|302419457|ref|XP_003007559.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261353210|gb|EEY15638.1| aspartyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 569

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 95/347 (27%), Gaps = 61/347 (17%)

Query: 18  RRPFLLKRNMIQSSL---R--------EYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
             P + KR  +Q ++   R        EY     F++ +   L  +  +E     FS   
Sbjct: 244 SNPAMHKRAPVQQAIADVRMARASVFAEYLDTQNFVQFEPPCLIGAA-SEGGANVFSMP- 301

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
               +  K  YL  SP+F  +  +A G ++++C             H  EFT L+     
Sbjct: 302 ----YFEKTAYLAQSPQFYKQIEIAGGRKRVYCIGPN----SNTPRHMTEFTGLDLEMEI 353

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
           E     + + +  +        ++  + Q          E   +         +      
Sbjct: 354 EEDYHEVMEMLEKVLLHIFRGIKERCAEQIEIIRAVYPSEDFLLPAPGEGVLRLTFAEGQ 413

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
               +         +    +    +     +                   +LD++P    
Sbjct: 414 KLLREEGPEEYRNVSDNEDMSTPQEKALGALI---------RKKYNTDFFVLDKFPESAR 464

Query: 247 ALAN-IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                  PA+P  T  ++ +    E+ +    +  P     R        K +  E+  I
Sbjct: 465 PFYALEDPANPAVTNAYDFFMRGQEILSGGQRIHIPSVLEARLRT-----KGVDPESQGI 519

Query: 306 DEDFLACLT-------------EMPQSSGIAMGFDRLVMLVTGANNI 339
            E ++                             DR+V       ++
Sbjct: 520 KE-YVDVFRSVGVPPHGGGGIG-----------LDRVVAWFLNLPSV 554


>gi|149391071|gb|ABR25553.1| asparaginyl-trna synthetase [Oryza sativa Indica Group]
          Length = 80

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 2/74 (2%)

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVT 334
            EL+   ++  R +       ++          +L          +G  +GF+RLV   T
Sbjct: 2   GELIGGSQREERLDYLEARLDELNLNKDSY-WWYLDLRRYGSVPHAGFGLGFERLVQFAT 60

Query: 335 GANNINEVIWTPFS 348
           G +NI + I  P  
Sbjct: 61  GMDNIRDTIPFPRV 74


>gi|213863418|ref|ZP_03386673.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 71

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           F T     + +   +YL+ +PE   K+L+  G E++F     +RN      H PEFTM+E
Sbjct: 1   FITH---HNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMME 57

Query: 122 WYRAHESYE 130
            Y A+  Y 
Sbjct: 58  LYMAYADYH 66


>gi|296390679|ref|ZP_06880154.1| aspartyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 203

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 18/87 (20%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIR 60
           +   R R            L  R  I SS+R Y  +N F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAAKLKLRARITSSIRRYLDDNGFLDVETPILGRPTPEGARDYLV 181

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCK 87
              T      +      L  SP+   +
Sbjct: 182 PSRT------YPGHFFALPQSPQLFKQ 202


>gi|258614293|ref|ZP_05712063.1| lysyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 209

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 13/63 (20%)

Query: 1   MHQIPSQPWWNR--DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSM 47
           +  +P +       +  YR+R              +KR+ I S +R Y   N +IE+++ 
Sbjct: 147 LRPLPDKYHGLTNIEQRYRQRYLDLISNRESFDRFMKRSQIISEIRRYLDGNGYIEVETP 206

Query: 48  SLQ 50
            L 
Sbjct: 207 VLH 209


>gi|47026941|gb|AAT08691.1| asparaginyl-tRNA synthetase [Hyacinthus orientalis]
          Length = 88

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
            EL+   ++  R    ++  K+      P  E +L        + SG  +GF+R++M  T
Sbjct: 10  GELIGGSQREERLGVLVERIKEAGLPLEPY-EWYLDLRRFGTVKHSGFGLGFERMIMFAT 68

Query: 335 GANNINEVIWTPF 347
           G +NI +VI  P 
Sbjct: 69  GIDNIRDVIPFPR 81


>gi|223933850|ref|ZP_03625816.1| asparaginyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897468|gb|EEF63863.1| asparaginyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 101

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 2/76 (2%)

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVML 332
              E++    +   ++  + +  ++  +     E +L           G  +G +R+V  
Sbjct: 21  GYGEIIGGSMREDNYDALVAKMDELGMDKSEY-EFYLDLRKYGSVPHGGFGIGIERMVTF 79

Query: 333 VTGANNINEVIWTPFS 348
           V G  +I E I  P  
Sbjct: 80  VAGTKHIREAIPFPRM 95


>gi|256078425|ref|XP_002575496.1| aspartyl-tRNA synthetase [Schistosoma mansoni]
 gi|238660736|emb|CAZ31729.1| aspartyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 512

 Score = 70.8 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 86/283 (30%), Gaps = 31/283 (10%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAF 62
           Q+ ++    R  +  +   L   ++   + R +FV+  ++E+   +   +    +     
Sbjct: 225 QLDNRHLVIRGENTAK--VLRLVSVALEAFRAHFVDRGYVEVLPPTFVQTQVEGSA---- 278

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLE 121
              L   ++  +  ++  S +   +  + A     FC   ++R  +     H  E+  +E
Sbjct: 279 --TLFSLNYFGETAFMSQSSQLYLETCIPAV-GDCFCITRSYRAEKSRTRRHLSEYNHVE 335

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
                     L++   +++              ++ +      P++ T    F R    D
Sbjct: 336 AECPFIDLNGLLERIEDLVVDVC-----DRIMKRSGDLLLDVNPQFKTPKRPFKRLKYED 390

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
               L+N       L                 + D        ++   +G     +L  +
Sbjct: 391 AIVCLNNLGITKEDLT-------------PFQYGDDIPEAPERRLVDTIGE--PVLLTNF 435

Query: 242 PAPESALAN-IYPADPRFTKRFELYACNIELCNACDELLDPIE 283
           PA            D R T   +L    +         +D I+
Sbjct: 436 PAGLKVFYMLRTKGDERLTDSVDLLVPGVGELVGGSMRVDDID 478


>gi|331214131|ref|XP_003319747.1| asparaginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309298737|gb|EFP75328.1| asparaginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 577

 Score = 70.8 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 100/355 (28%), Gaps = 62/355 (17%)

Query: 1   MHQIPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--- 52
           + +IP         H R R       +  R+ +      +     F   ++  + ++   
Sbjct: 225 LRRIP---------HLRVRTHETSALMRIRSTMIQEASSFLHAQHFFRSETPIITFNDCE 275

Query: 53  PGNETH-----------IRAFST-------------ELIIQDHIRKPLYLQTSPEFSCKK 88
              E             ++   T                      +  +L  S +    +
Sbjct: 276 GAGEVFSVRPDSQSKSSLQPPITISEKVPNSAPESAASHESRFFGREAFLTVSGQLHL-E 334

Query: 89  LLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAH-ESYEQLMKDCMNIIRCAAEV 146
            L+A   +++ F  A+R        H  EF MLE   +  E  E L+    N+I+   + 
Sbjct: 335 ALSASLGRVYSFGPAFRAERSQTNRHLAEFWMLEAELSFIEDLESLIVLLENLIKSIIQN 394

Query: 147 ANQKIFSFQNVNCNPFSEPE-YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
            +Q          +  +  E Y + ++++ R    +    + +  +              
Sbjct: 395 LHQSDSLSSLDLQSLRAPKEPYNSTSKSWPRITYTEAVELVQSHHEEHPSEANRL----- 449

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP-RFTKRFEL 264
                  TW    +    + +           +  YPA          A P   +++ + 
Sbjct: 450 ----PPITWGQPLASEHEKWLSGTYARVP-IFVTDYPASIKPFYMRQTAKPSDLSQKRKT 504

Query: 265 YACNIELCNACDELLDPIEQRHRFEK-EMQEKKKI---YNETYPIDEDFLACLTE 315
            AC   L     EL+    +     K +    +K      E   +D+        
Sbjct: 505 VACFDLLVPGVGELVGGSLRESNLTKLQENMMQKGMITGGEA--VDDSLSNAHEG 557


>gi|238603310|ref|XP_002395912.1| hypothetical protein MPER_03947 [Moniliophthora perniciosa FA553]
 gi|215467470|gb|EEB96842.1| hypothetical protein MPER_03947 [Moniliophthora perniciosa FA553]
          Length = 91

 Score = 70.8 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 11/92 (11%)

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI-YNETYPIDEDFLACLT-EM 316
           +  ++ +    E+ +    + DP           + + K    E+      ++       
Sbjct: 3   SNSYDFFMRGEEILSGAQRIHDPKVLAE------KMRAKGVDPESM---TGYMDAFRMGC 53

Query: 317 PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           P   G  +G +R++ML    NNI      P  
Sbjct: 54  PPHGGGGIGLERVLMLFLKLNNIRRASLFPRD 85


>gi|312601448|gb|ADQ90703.1| asparagine synthetase A [Mycoplasma hyopneumoniae 168]
          Length = 333

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 100/334 (29%), Gaps = 37/334 (11%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI--RAFSTELIIQDHIRKPLYL 78
            L   + +     ++  +N    ++      S  +   +   +   ++I +++     YL
Sbjct: 22  ILTIYSEMNFLTYKWMRDNNVKIVNCPITTQSISSPMGLGSDSLPYKVISKNNPNFEFYL 81

Query: 79  QTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +F  +  L     E +   A  +R       H  +F   E     +   +  K  +
Sbjct: 82  ADSIQFHLELFLRTKNVESVGYIAPTFRGENVDERHLHQFNHFEIE-TKKPLVETKKMII 140

Query: 138 NIIRCAAEVANQKIFS--FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
           N ++   +   +   +        N     +++   +    + N          +  DR 
Sbjct: 141 NYLKYLVKNLVKTHSAELNYFNENNVLRLLKWLNFDQYNLLFTNAIKILDEKFKEGIDRT 200

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L     G +   +     I                    LD +P   +        D
Sbjct: 201 ELLLNINSKGEKFLINYFSDKIL------------------WLDNFP-EINVPFYQKSKD 241

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE-DFLACLT 314
                   L      + +              F+     K  + ++  P +   +L    
Sbjct: 242 GFAINSDLLMGIGEIVGSG----------ERCFDYNETLKSLLNHKNNPQNYKWYLEMKE 291

Query: 315 EMPQ-SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + P  +SG  +G +RL++ + G N+I EV   P 
Sbjct: 292 KTPMITSGFGLGMERLMLFLIGKNDIREVQLIPR 325


>gi|213621847|ref|ZP_03374630.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-2068]
          Length = 60

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 4  IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
          +     W         P LLKR  I + +R +F +   +E+++  +  +   + H+  F 
Sbjct: 1  MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLFPFE 57

Query: 64 TEL 66
          T  
Sbjct: 58 TRF 60


>gi|72080831|ref|YP_287889.1| asparagine synthetase A [Mycoplasma hyopneumoniae 7448]
          Length = 352

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 100/334 (29%), Gaps = 37/334 (11%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI--RAFSTELIIQDHIRKPLYL 78
            L   + +     ++  +N    ++      S  +   +   +   ++I +++     YL
Sbjct: 41  ILTIYSEMNFLTYKWMRDNNVKIVNCPITTQSISSPMGLGSDSLPYKVISKNNPNFEFYL 100

Query: 79  QTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +F  +  L     E +   A  +R       H  +F   E     +   +  K  +
Sbjct: 101 ADSMQFHLELFLRTKNVESVGYIAPTFRGENVDERHLHQFNHFEIE-TKKPLVETKKMII 159

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSE--PEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
           N ++   +   +   +  N           +++   +    + N          +  DR 
Sbjct: 160 NYLKYLVKNLVKTHSAELNYFNENNVPRLLKWLNFDQYNLLFTNAIKILDEKFKEGIDRT 219

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L     G +   +     I                    LD +P   +        D
Sbjct: 220 ELLLNINSKGEKFLINYFSDKIL------------------WLDNFP-EINVPFYQKSKD 260

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE-DFLACLT 314
                   L      + +              F+     K  + ++  P +   +L    
Sbjct: 261 GFAINSDLLMGIGEIVGSG----------ERCFDYNETLKSLLNHKNNPQNYKWYLEMKE 310

Query: 315 EMPQ-SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + P  +SG  +G +RL++ + G N+I EV   P 
Sbjct: 311 KTPMITSGFGLGMERLMLFLIGKNDIREVQLIPR 344


>gi|144575486|gb|AAZ53866.2| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448]
          Length = 351

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 100/334 (29%), Gaps = 37/334 (11%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI--RAFSTELIIQDHIRKPLYL 78
            L   + +     ++  +N    ++      S  +   +   +   ++I +++     YL
Sbjct: 40  ILTIYSEMNFLTYKWMRDNNVKIVNCPITTQSISSPMGLGSDSLPYKVISKNNPNFEFYL 99

Query: 79  QTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
             S +F  +  L     E +   A  +R       H  +F   E     +   +  K  +
Sbjct: 100 ADSMQFHLELFLRTKNVESVGYIAPTFRGENVDERHLHQFNHFEIE-TKKPLVETKKMII 158

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSE--PEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
           N ++   +   +   +  N           +++   +    + N          +  DR 
Sbjct: 159 NYLKYLVKNLVKTHSAELNYFNENNVPRLLKWLNFDQYNLLFTNAIKILDEKFKEGIDRT 218

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
            L L     G +   +     I                    LD +P   +        D
Sbjct: 219 ELLLNINSKGEKFLINYFSDKIL------------------WLDNFP-EINVPFYQKSKD 259

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE-DFLACLT 314
                   L      + +              F+     K  + ++  P +   +L    
Sbjct: 260 GFAINSDLLMGIGEIVGSG----------ERCFDYNETLKSLLNHKNNPQNYKWYLEMKE 309

Query: 315 EMPQ-SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           + P  +SG  +G +RL++ + G N+I EV   P 
Sbjct: 310 KTPMITSGFGLGMERLMLFLIGKNDIREVQLIPR 343


>gi|75761058|ref|ZP_00741057.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491442|gb|EAO54659.1| Asparaginyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 267

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 21/130 (16%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H R R          R++   ++ ++F E  F+ + +  +  S       +   +T+ +
Sbjct: 134 AHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTTQDL 193

Query: 68  -------------IQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         +D   K   L  S + + +    A    ++ F   +R        H
Sbjct: 194 NNVPKGEDGQVDESKDFFGKETNLTVSGQLNAEAYALA-FRDVYTFGPTFRAENSNTTRH 252

Query: 114 QPEFTMLEWY 123
             EF M+   
Sbjct: 253 AAEFWMVSLR 262


>gi|198465133|ref|XP_002134918.1| GA23745 [Drosophila pseudoobscura pseudoobscura]
 gi|198150028|gb|EDY73545.1| GA23745 [Drosophila pseudoobscura pseudoobscura]
          Length = 225

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 22/152 (14%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
             D     R  +++          R+++  + R+++ +  + E+   +L      G  T 
Sbjct: 81  LPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRDHYFDRGYNEVTPPTLVQTQVEGGST- 139

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L       +  +L  S +   +  L A    +F  A ++R  +     H  E+
Sbjct: 140 -------LFKMQFFGEEAFLTQSSQLYLETCLPA-LGDVFTIAQSYRAEQSRTRRHLAEY 191

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ 149
           T +E      SY+ L+    +++    +   +
Sbjct: 192 THVEAECPFISYDDLLDRLEDLVCDVVDRVLK 223


>gi|160903095|ref|YP_001568676.1| asparagine synthetase A [Petrotoga mobilis SJ95]
 gi|160360739|gb|ABX32353.1| tRNA synthetase class II (D K and N) [Petrotoga mobilis SJ95]
          Length = 319

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 109/336 (32%), Gaps = 63/336 (18%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             LL ++ I    RE+  E  F+EI    +  +  +  +   F  ++   D+     Y+ 
Sbjct: 28  DALLVQSEILRLSREFLAEKGFVEI-LPVIVSTITDPLNHDVFEAQI---DYYGNKYYVT 83

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNG----EQGCLHQPEFTMLEWYRAHESYEQLMKD 135
            S     +  +    +KIF F+   R           H  +F  L+        E++M  
Sbjct: 84  KSMILQKQVSVL-IHDKIFSFSPNLRLETAEKYSSGRHLIDFVQLDIEAKETKREEIMDL 142

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI--DLGTTLDNPDQPD 193
             ++I    +                              +Y+ I       L  P +P 
Sbjct: 143 MEDLIIYVLKGILT--------------------------KYSGIIEKYHPNLTVPKKPF 176

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
           + +   +A++          + D + +IL E+ E          L   P       +   
Sbjct: 177 QKISVKKAKEL---------YGDDYEKILSERAE------GPVWLIDIPLLNREFYDKQD 221

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ--EKKKIYNETYPIDEDFLA 311
            D        L   ++       E +   E+ H +E+ ++  + K    E+Y   ED+L 
Sbjct: 222 MDN----PDVLLDFDLIYPEGHGEGISGGEREHEYEQIVKRIKLKGNGLESY---EDYLK 274

Query: 312 -CLTEMPQS-SGIAMGFDRLVMLVTGANNINEVIWT 345
                + +  +G  +G +R    +   +++ +    
Sbjct: 275 LAKEGLLKHSAGCGIGIERFTKYILDLDHVEKSRLF 310


>gi|330896124|gb|EGH28345.1| aspartyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 194

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 12/73 (16%)

Query: 13  DFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQY-SPGNET-HIR 60
           +   R R            L  R+ I +S+R Y  +N F+++++  L   +P     ++ 
Sbjct: 122 ETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYLV 181

Query: 61  AFSTELIIQDHIR 73
              T       + 
Sbjct: 182 PSRTHPGSFFALP 194


>gi|255656228|ref|ZP_05401637.1| asparaginyl-tRNA synthetase [Clostridium difficile QCD-23m63]
          Length = 287

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 21/154 (13%)

Query: 14  FHYRRR-----PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R          R++   ++ ++F E  F+   S  +  S       +   +T   
Sbjct: 124 AHLRPRSNTFSAVFRVRSIAAYAIHKFFQERNFVYAHSPIITGSDCEGAGEMFRITTMDL 183

Query: 66  -----------LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLH 113
                         QD   K   L  S +    +++A     ++ F   +R        H
Sbjct: 184 NDIPKTEDGKIDYTQDFFGKEANLTVSGQL-NAEIMALSFRNVYTFGPTFRAENSYTGRH 242

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
             EF M+E        E  M+   ++I+      
Sbjct: 243 ASEFWMIEPEIVFADLEDNMELAEDMIKYVISYV 276


>gi|260822036|ref|XP_002606409.1| hypothetical protein BRAFLDRAFT_118529 [Branchiostoma floridae]
 gi|229291750|gb|EEN62419.1| hypothetical protein BRAFLDRAFT_118529 [Branchiostoma floridae]
          Length = 478

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 70/203 (34%), Gaps = 17/203 (8%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
           Q+ ++    R  +  +   +  R+++    RE++    + E+   +L      G  T   
Sbjct: 239 QLDNRHMMIRGENMSK--VMKMRSVVMQCFREHYFNRGYCEVTPPTLVQTQVEGGST--- 293

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG-EQGCLHQPEFTM 119
                L   D+  +  YL  S +   +  L +    +FC A ++R    +   H  E+T 
Sbjct: 294 -----LFTLDYFGEQAYLTQSSQLYLETCLPS-MGDVFCIAESYRAELSRTRRHLAEYTH 347

Query: 120 LEWYRAH--ESYEQLMKDCMNIIR-CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR 176
           +E            L       I      ++   +        +  +E  +I+  +  +R
Sbjct: 348 IEAECPFISFDDLFLSNPRYTHIEAECPFISFDDLVPLTPRYTHIEAECPFISFDDLLSR 407

Query: 177 YANIDLGTTLDNPDQPDRHLLYL 199
             ++   T     + P  +LL  
Sbjct: 408 VEDLVCDTVDRVINSPFGNLLKE 430


>gi|198465182|ref|XP_002134927.1| GA23748 [Drosophila pseudoobscura pseudoobscura]
 gi|198150046|gb|EDY73554.1| GA23748 [Drosophila pseudoobscura pseudoobscura]
          Length = 707

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 22/132 (16%)

Query: 11  NRDFHYRRRPFLLK----------RNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETH 58
             D     R  +++          R+++  + R+++ +  + E+   +L      G  T 
Sbjct: 226 LPDVQLDNRHIMIRGENTSKVLKMRSVVMQAFRDHYFDRGYNEVTPPTLVQTQVEGGST- 284

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEF 117
                  L       +  +L  S +   +  L A    +F  A ++R  +     H  E+
Sbjct: 285 -------LFKMQFFGEEAFLTQSSQLYLETCLPA-LGDVFTIAQSYRAEQSRTRRHLAEY 336

Query: 118 TMLEWYRAHESY 129
           T +E      SY
Sbjct: 337 THVEAECPFISY 348


>gi|315229828|ref|YP_004070264.1| asparagine--tRNA ligase-like protein [Thermococcus barophilus MP]
 gi|315182856|gb|ADT83041.1| asparagine--tRNA ligase-like protein [Thermococcus barophilus MP]
          Length = 304

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 53/344 (15%), Positives = 100/344 (29%), Gaps = 76/344 (22%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-------PGNETHIRAFSTELIIQDHI 72
           P +  +  I   +  +FV   F  +  + L          P     ++    E       
Sbjct: 13  PAMEVQTKIIEYMTRFFVGKGFKWLLPVMLSSITDPLWPDPAASEALKPPEIE-----AY 67

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ---GCLHQPEFTMLEWYRAHESY 129
              L L  S     +  +A G +K+F  +   R   +      H  EFT L++  A+ + 
Sbjct: 68  GGKLRLMHSMILHKQLAVAMGIDKLFILSPNIRLEGREADDGRHAYEFTQLDFEIAYATM 127

Query: 130 EQLMKDCMNIIRCAAEVANQKIF--SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
           + +M      I    + A +                  +  T+ E  A + + D  +   
Sbjct: 128 DDVMSLIEEAISGLFKEARKWEILEELGREVPKAKPPFKRFTLEEIKAEFGDEDKAS--- 184

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
                                  +  W     R                           
Sbjct: 185 -------------------EAMDEPFWITDIEREF------------------------- 200

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE--KKKIYNETYPI 305
                P  P   + ++LY     L     E+    E+   ++  +++  K  I  E +  
Sbjct: 201 YDREDPERPGHFRNYDLY-----LPWGYGEVSSGGEREWEYDIIVRKMKKAGISLEAFKP 255

Query: 306 DEDFLA-CLTEM-PQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              +L      +   ++G  +G +RLV  + GA +I EV   P 
Sbjct: 256 ---YLEVAKAGLLKPTAGAGIGMERLVRFIVGAKHIAEVQPFPR 296


>gi|328716991|ref|XP_003246091.1| PREDICTED: probable asparaginyl-tRNA synthetase, mitochondrial-like
           isoform 3 [Acyrthosiphon pisum]
          Length = 405

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 46/140 (32%), Gaps = 22/140 (15%)

Query: 11  NRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHI-RA 61
            +  H R R       L  R+ + S++R  F E+ FIEI++  L  +      E    + 
Sbjct: 133 RQHLHIRPRTATFSSLLRLRDKLSSAVRNRFAEDNFIEINAPVLSSNDCEGAGEVFAVKP 192

Query: 62  ----------FSTELIIQDH-IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG 110
                             +       YL  S +    + +A    K++     +R     
Sbjct: 193 DSEKLVKEMISKDHQSPMEAFFNGQTYLTVSGQMHL-ECMARALTKVYTLGPTFRAENSK 251

Query: 111 CL-HQPEFTMLEWYRAHESY 129
              H  EF M+E  +A    
Sbjct: 252 SRLHLSEFYMIEAEQAFIDN 271



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           ++G  +GF+R + ++    NI + I  P 
Sbjct: 370 TAGFGIGFERFLQVLLDVQNIKDTIAFPR 398


>gi|296242010|ref|YP_003649497.1| tRNA synthetase class [Thermosphaera aggregans DSM 11486]
 gi|296094594|gb|ADG90545.1| tRNA synthetase class II (D K and N) [Thermosphaera aggregans DSM
           11486]
          Length = 450

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 55/336 (16%), Positives = 102/336 (30%), Gaps = 51/336 (15%)

Query: 17  RRRPFLLKR--NMIQSSLREYFVENQFIEIDSMSL--QYSPG--NETHIRAFSTELIIQD 70
           R R F + R  +++   +R   +   F E+    L  +  PG    + ++          
Sbjct: 138 RPRCFKVIRTISILSYLIRNALIFEGFTELQPPILGWKSDPGLRGASKVKVSL------- 190

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ----GCLHQPEFTMLEWYRAH 126
                  L +S     +   A+  EKIF FA   R           H  EFT ++   A 
Sbjct: 191 -YGSEYELHSSLIMYKQIY-ASIFEKIFYFARNIRVEPAENFYTGRHLVEFTQVDVEEAF 248

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
            S ++ +    +I++        K F   + +    S  E++       +Y  I     +
Sbjct: 249 TSMQESISLAESILKKVV-----KEFLNNHADLLDSSRIEWLDRTFLTEKYPVITYEEAV 303

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
           D   Q    L               + +                       L  +P+   
Sbjct: 304 DLLTQHGFELRRGCELPHNAEAFLGEYYGT------------------PVWLTGFPSTAR 345

Query: 247 ALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
               I     P +   + L      +     E+LD   + +R E+  +  K         
Sbjct: 346 GFYYIENAEKPGYNVDWNLI-----VPEGHGEVLDGGCREYRVEELEKRIKSTGENPSEY 400

Query: 306 DEDFLACL-TEMP-QSSGIAMGFDRLVMLVTGANNI 339
            + FL  +       + G  +G +RLV    G  ++
Sbjct: 401 -QWFLDIVSKGYVKPTCGWGLGLERLVKTFHGLAHV 435


>gi|221135520|ref|ZP_03561823.1| asparaginyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 65

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 302 TYPID-EDF--LACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
              +D ED+     L        SG  +GF+RLV  VTG  N+ +VI  P +
Sbjct: 8   EMNLDPEDYGWYRDLRRYGTVPHSGFGLGFERLVAYVTGMQNVRDVIPFPRT 59


>gi|297795301|ref|XP_002865535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311370|gb|EFH41794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 320

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 55/163 (33%), Gaps = 11/163 (6%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY--SPGNETHIRAFSTELIIQDHIRKPL 76
           +     R+ I++  R+Y +  +F  I +  L      G  +        +   D+I K  
Sbjct: 157 QAIFRVRSHIENFFRQYLLALEFDSIHTPKLLARKINGGAS--------VFCLDYIGKDA 208

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKD 135
            L  S +   +  +++G  K+F     +R+       H  EF  L      + +   + D
Sbjct: 209 SLAQSAQLHKQMAISSGFTKVFDIGTYFRSERSSTNRHLTEFVTLNVEMELKYHYNEVMD 268

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++ +     +   +  + Q          E +       R +
Sbjct: 269 LVDGLFADIFMQVNQSCANQLDAIAKQYPFEPLKFLPNTLRIS 311


>gi|297790381|ref|XP_002863084.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308901|gb|EFH39343.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 320

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 55/163 (33%), Gaps = 11/163 (6%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQY--SPGNETHIRAFSTELIIQDHIRKPL 76
           +     R+ I++  R+Y +  +F  I +  L      G  +        +   D+I K  
Sbjct: 157 QAIFRVRSHIENFFRQYLLALEFDSIHTPKLLARKINGGAS--------VFCLDYIGKDA 208

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKD 135
            L  S +   +  +++G  K+F     +R+       H  EF  L      + +   + D
Sbjct: 209 SLAQSAQLHKQMAISSGFTKVFDIGTYFRSERSSTNRHLTEFVTLNVEMELKYHYNEVMD 268

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
            ++ +     +   +  + Q          E +       R +
Sbjct: 269 LVDGLFADIFMQVNQSCANQLDAIAKQYPFEPLKFLPNTLRIS 311


>gi|317153318|ref|YP_004121366.1| phenylalanyl-tRNA synthetase class IIc [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943569|gb|ADU62620.1| phenylalanyl-tRNA synthetase class IIc [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 369

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 58/320 (18%), Positives = 104/320 (32%), Gaps = 67/320 (20%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
            ++ + +R YF +N F E+   S+   PGN         ++   D   K   L +S    
Sbjct: 93  AILLNQIRNYFYDNNFFEVRLPSIH--PGNNKG------DIFEIDFFGKKARLSSSNALY 144

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
              ++AA   K++     +R        H  EF MLE       +E L+ +    I    
Sbjct: 145 S-TVMAANMGKVYSIQRCYRAEPSKTSKHLSEFDMLEVSFVGHCFEDLICELSKFISDIF 203

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
              ++       +   PF +   ++ A+   +Y                     L  +  
Sbjct: 204 NRVSK--IIPDQIKALPFEDIPIVSYADLNCKYG--------------------LLNKGL 241

Query: 205 GIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFEL 264
           G                   K E  +  N  T +  +P+  S  + + P D ++T     
Sbjct: 242 G-------------------KHEREISKNGPTTVIHFPSKISTWSAL-PIDDKYTYSLNF 281

Query: 265 YACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL---ACLTEMPQSS 320
            A  + E+   C         R +FE    +        + +D + L     L+      
Sbjct: 282 LAPGVGEVAEGCLRDTRESFLRCKFE----KLDLCDQLNWYVDLNPLPNIKILS------ 331

Query: 321 GIAMGFDRLVMLVTGANNIN 340
              +G +RL M + G  NI 
Sbjct: 332 -FGLGIERLAMWLFGITNIR 350


>gi|242399490|ref|YP_002994915.1| Asparaginyl-tRNA synthetase-related protein [Thermococcus sibiricus
           MM 739]
 gi|242265884|gb|ACS90566.1| Asparaginyl-tRNA synthetase-related protein [Thermococcus sibiricus
           MM 739]
          Length = 305

 Score = 68.5 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/335 (14%), Positives = 93/335 (27%), Gaps = 61/335 (18%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET-HIRAFSTELIIQ--DHIRKPLY 77
            +  +  +   L ++FV+  F  +  + L      +       S+++     D     L 
Sbjct: 18  TIRVQTKLIDYLTDFFVKKGFKWLLPVMLSSI--TDPLWPDPASSKMRAPEIDAYGTRLK 75

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC---LHQPEFTMLEWYRAHESYEQLMK 134
           L  S     +  +A G EKIF  +   R  E+      H  EFT +++  A+ + + +M 
Sbjct: 76  LMHSMILHKQFAIAMGLEKIFVLSPNIRLEERDRDDGRHAYEFTQIDFEIAYATMDDVMS 135

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
               +I    + A       +          +  T+AE                      
Sbjct: 136 LIEELIVGLFKEARTWEELGERDLPKVKVPFKRFTMAE---------------------- 173

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                                        +  E +  +     +           +    
Sbjct: 174 -----------------------IEEEFGDDEEASRAMEEPFWITDISREFYDREDPKRP 210

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT 314
                    L            E+    E+   +E  +++ K+                 
Sbjct: 211 GHFRNYDLIL-------PEGYGEVSSGGEREWEYEAILRKLKESGLSLRAFRPYLEVAKA 263

Query: 315 E-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             +  S+G  +G +RLV  + GA +I EV   P  
Sbjct: 264 GKLKPSAGAGIGIERLVRYIVGAKHIAEVQPFPRV 298


>gi|320101031|ref|YP_004176623.1| tRNA synthetase class II (D K and N) [Desulfurococcus mucosus DSM
           2162]
 gi|319753383|gb|ADV65141.1| tRNA synthetase class II (D K and N) [Desulfurococcus mucosus DSM
           2162]
          Length = 364

 Score = 68.5 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 55/341 (16%), Positives = 99/341 (29%), Gaps = 41/341 (12%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H R    +   +M+  ++R    E+ F E+ S  +     ++  +R      I      
Sbjct: 51  RHPRVLRAVKTYSMVLKAMRSILDEHGFTELPSPIIG--YVSDPGLRGAVKASIKMYG-- 106

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ----GCLHQPEFTMLEWYRAHESY 129
             +Y   S     K+L A+   KI+  A   R           H  EFT L+   +  + 
Sbjct: 107 -KVYEVQSSVIMYKQLYASLLGKIYYAARNLRVEPVENASTGRHLAEFTQLDVEASLTTA 165

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + +M      +  A +                F E   I        Y  ID  + +   
Sbjct: 166 DDVMMLAEETLYGAVKHLLNYHSGLLTREEERFLEETII-----KPPYPRIDYDSAV--- 217

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES-AL 248
                       ++ G  V H        S      +    G      +  +P       
Sbjct: 218 ---------ELLRRKGFTVEH----GRELSFDAEAALGDIYGT--PVWIQGFPTSSRGFY 262

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
               P  P +   + L   +        E+LD   + +R+E  +   K          + 
Sbjct: 263 YIPDPGKPGYNVDYNLILPSRA-----GEVLDGGCREYRYEHLVDRIKHHGEPLGKY-KW 316

Query: 309 FLA-CLTEMP-QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           FL          + G  +G +RLV  +    ++      P 
Sbjct: 317 FLELAEAGAIQPTCGWGLGVERLVRYIHRLPHVAYASPHPR 357


>gi|47208665|emb|CAF88672.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 533

 Score = 68.5 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 12/106 (11%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+ +    R++F    + EI   +L      G  T        L   ++  +  YL
Sbjct: 223 ILRVRSTVTQCFRDHFFSRGYYEIAPPTLVQTQVEGGST--------LFSLNYFGEQAYL 274

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
             S +   +  + A     FC A ++R  +     H  EF      
Sbjct: 275 TQSSQLYLETCIPA-LGDTFCIAQSYRAEQSRTRRHLSEFRSFVLQ 319


>gi|290978180|ref|XP_002671814.1| aspartyl-tRNA synthetase [Naegleria gruberi]
 gi|284085386|gb|EFC39070.1| aspartyl-tRNA synthetase [Naegleria gruberi]
          Length = 461

 Score = 68.5 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/336 (11%), Positives = 94/336 (27%), Gaps = 44/336 (13%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
            H         +++I     EY     F EI +  +  +  ++ +I +F+      D+  
Sbjct: 157 RHSFMHHIFKLQSLIGRKFCEYMYSKDFTEIHTPHIVKNQ-SDNNISSFT-----FDYFG 210

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW-RNGEQGCLHQPEFTMLEWYRAHESYEQL 132
             + L TS     +  +  G +++F  + A+ ++     +H  E T L +     S+   
Sbjct: 211 NSVELTTSSHLHQQLAIHGGLDRVFEISCAFEKHHGCTHVHLNEKTTLNFGMTIASHYHE 270

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +   +  +                         + I+  E     A  +           
Sbjct: 271 VISVVKELLNYII--------------------DEISEYEGLEVIAKHNSRGLEKLKKTE 310

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
              L + +A    I    ++ +   F  +           +   I +             
Sbjct: 311 ILELTFKEADALLIANCSENEFGG-FMALREVASYFKDYTDILIIQNSAHEEVGCFEMPS 369

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
                F   F +    I +   C  + D        + +++              D ++ 
Sbjct: 370 STGKGF-NNFIILIRGIVVGRGCQYIHD----EELLKHQVRCHAP----------DLVSA 414

Query: 313 L-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           L        G ++  +  +M     +N+      P 
Sbjct: 415 LKYGAQPCGGCSIDLELFLMQFLQLSNVRFTSLFPR 450


>gi|255576044|ref|XP_002528917.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223531619|gb|EEF33446.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 187

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 42/157 (26%), Gaps = 10/157 (6%)

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
           + D        ++  I    D    D       + IE    +        +P  ++    
Sbjct: 34  KEDMDFFNTWIEKGIIDRLSDVAEKDFVQLTYTDAIE---LLLKANKKFEFPEIKAFYMR 90

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
                        L     EL               R +     K    +  + +D    
Sbjct: 91  QNDDGKTVAAMDMLVPRIGELIGGSQREERLEYLEERLDD---LKLNKDSYWWYLDLR-- 145

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                    +G  +GF+RLV   TG +NI + I  P 
Sbjct: 146 --RYGSVPHAGFGLGFERLVQFATGIDNIRDAIPFPR 180


>gi|257077259|ref|ZP_05571620.1| asparagine synthetase A [Ferroplasma acidarmanus fer1]
          Length = 319

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/341 (14%), Positives = 98/341 (28%), Gaps = 66/341 (19%)

Query: 17  RRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPL 76
           R +  +  ++ I+S + ++  E  +IEI +  +   P  +                   +
Sbjct: 26  RVQHAIKVQSYIRSYVTDFLREAGYIEI-APIIIS-PLTDPLNHP--VYDPKIHAYGGDM 81

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE----QGCLHQPEFTMLEWYRAHESYEQL 132
           ++  S     K++     +KIF  +   R       +   H  EFT ++     +S E++
Sbjct: 82  WITQSM-IFHKQIAVQELKKIFIMSPNVRLETEEKSKSGRHLYEFTQIDVEALEKSREEM 140

Query: 133 MKDCMNIIRCAAEVANQKIFS----FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
           M    ++I        ++       F     +       IT  EA  +Y           
Sbjct: 141 MSLAEDMIIYTISRLKKEHKEELEYFHRTLPDYAKPFPVITFEEAEKKYG---------- 190

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                           G                               ++D         
Sbjct: 191 ---------------KGFETPLS-----------------KESSTPVWVVDIPLKEREFY 218

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK--EMQEKKKIYNETYPID 306
              YP  P   +  +L           +E     E+ +   +  +  +KK    E +   
Sbjct: 219 DREYPEKPGILRDMDLIWP-----EGFEEASSGGEREYELSQILDRIQKKGQTEEQF--- 270

Query: 307 EDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           + F+      +  ++G  +G +R    V G   I +V   P
Sbjct: 271 KWFIELAKQGIKYTAGFGIGIERFTRFVCGVEKIEDVTTFP 311


>gi|47215108|emb|CAG02532.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1438

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/358 (12%), Positives = 106/358 (29%), Gaps = 33/358 (9%)

Query: 5    PSQPWWNRDFH-------YRRRPFLLKRNMIQSSLREYFVEN-QFIEIDSMSLQYSPGNE 56
            P + W + + H          R     +N +  S  EYF  + Q+    +     +  + 
Sbjct: 1095 PPRSWEDPESHSMLAISDQWYRNMFQIQNTLFHSTVEYFHSSCQYSYALTPITSDTISSP 1154

Query: 57   THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLL--AAGEEKIFCFAHAWRNGEQGCLHQ 114
              + +  +E +  + + + +YL  S +F  +  L        ++  + ++R  +    H 
Sbjct: 1155 MGLGS-DSEPVSVNLLGQDVYLADSMQFVLEYFLRFQENLPGVYYISPSFRGEDPDATHL 1213

Query: 115  PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
             +F  +E             +    I         K     + +    +     T+A   
Sbjct: 1214 NQFYHVECELVGG------IEKAMSIAERYVAHLTKSMLKNHSDVILNTA---GTLAHVT 1264

Query: 175  ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            A  + +D  T L      +   +   A            +    +R     +    G   
Sbjct: 1265 ALLSQLDGKTPLPKVPLDEAIAMMPSADCVEWVQDGQPQYGRKLTRKGERFLIKKYGSVV 1324

Query: 235  CTILDRY---PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE 291
                  +   P  ++ +        +           +       E     E      ++
Sbjct: 1325 WLTEMDHLGVPFYQAYVEGTEQTKAKAADLLL----GLGETVGLGERHFSPETVEAALRQ 1380

Query: 292  MQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
               +   Y   + I+   +  L     +SG  MG +R +  +   ++I +V+  P  +
Sbjct: 1381 HAVQDASY--RWYINMRRVKPLR----TSGWGMGSERYLCWLLQHDDIRDVVIIPRMK 1432


>gi|67624609|ref|XP_668587.1| aspartate-tRNA ligase F10M23.210 [Cryptosporidium hominis TU502]
 gi|54659782|gb|EAL38345.1| aspartate-tRNA ligase F10M23.210 [Cryptosporidium hominis]
          Length = 82

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 9/84 (10%)

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAM 324
               E+ +    + D      R ++            + +  D+L       P   G  +
Sbjct: 1   MRGEEILSGAQRVHDYDLLVKRCQEC-------GVSEHSL-RDYLNSFKLGAPPHGGCGI 52

Query: 325 GFDRLVMLVTGANNINEVIWTPFS 348
           G +R++ML     NI +    P  
Sbjct: 53  GLERVIMLFLNLGNIRKSSMFPRD 76


>gi|290559873|gb|EFD93196.1| aspartyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 112

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 5/86 (5%)

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAM 324
               E+      + +   Q    +           +        +  L    P+  G A+
Sbjct: 1   MNGNEIGGGAVRINNREMQLKILD----MIGIHEEDAMKNFGFLIEALSYGAPKDIGFAI 56

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQS 350
           G DR VML+ GA +I + I  P ++S
Sbjct: 57  GLDRFVMLLKGAQSIRDFILFPKTKS 82


>gi|47196948|emb|CAF87499.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 142

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 7/94 (7%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
            L  R+ +    R++F    + EI   +L  +   + +       L   ++  + +YL  
Sbjct: 53  ILRVRSTVTQCFRDHFFSRGYYEITPPTLVQTQVEDGY------TLFKLNYFGEQVYLTQ 106

Query: 81  SPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQ 114
             +   +  + A     FC A ++R  +      
Sbjct: 107 CSQLYLETCIPA-LGDTFCIAQSYRAEQSRTRRH 139


>gi|226322857|ref|ZP_03798375.1| hypothetical protein COPCOM_00629 [Coprococcus comes ATCC 27758]
 gi|225208643|gb|EEG90997.1| hypothetical protein COPCOM_00629 [Coprococcus comes ATCC 27758]
          Length = 72

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 9/74 (12%)

Query: 276 DELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVT 334
             + D      +       K+ +  E     E +L      MP   G+ +G +RL M + 
Sbjct: 1   QRIHDYDMLMEKL-----AKRGMTEEGL---ETYLDTFKHGMPPHGGLGIGMERLTMQLL 52

Query: 335 GANNINEVIWTPFS 348
           G +N+ E    P  
Sbjct: 53  GEDNVRETTLFPRD 66


>gi|212223203|ref|YP_002306439.1| asparagine synthetase A [Thermococcus onnurineus NA1]
 gi|212008160|gb|ACJ15542.1| truncated asparaginyl-tRNA synthetase-related protein [Thermococcus
           onnurineus NA1]
          Length = 300

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 103/342 (30%), Gaps = 76/342 (22%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS-------PGNETHIRAFSTELIIQDHI 72
           P +  +  +   +  Y V   F  +  + L          P     ++    E+      
Sbjct: 13  PVIEVQTRVIDYMTRYMVSKGFRWMLPVMLSSITDPLWPDPAASEALKPPEVEV-----Y 67

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ---GCLHQPEFTMLEWYRAHESY 129
            + L L  S     +  +A G  ++F  +   R   +      H  EFT L++  A+ S 
Sbjct: 68  GERLRLTHSMILHKQMAIAMGINRLFILSPNIRLEGRSADDGRHAYEFTQLDFEIAYASM 127

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + +M     +I    + A       +          +  T+ E  A + + D  +   + 
Sbjct: 128 DDVMSLIEELISGLFKEARNWGLEREVPKV--APPFKRFTLEEIKAEFGSEDEASKAMD- 184

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                                                EP   I+                
Sbjct: 185 -------------------------------------EPFWVIDIEREFYD--------- 198

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED- 308
              P  P   + ++LY     L     E+    E+   +E  +++ KK       +D   
Sbjct: 199 REDPERPGHFRNYDLY-----LPEGYGEVSSGGEREWEYEVIVRKIKKAG---ISLDAFK 250

Query: 309 -FLA-CLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +L       +  S+G  +G +RL+  + GA +I EV   P 
Sbjct: 251 PYLEVAKAGLLRPSAGAGIGIERLIRYLVGAEHIAEVQPFPR 292


>gi|324520043|gb|ADY47544.1| Asparaginyl-tRNA synthetase [Ascaris suum]
          Length = 155

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 17/114 (14%)

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEK 295
            +  +P+ +        +D R+ + F+L A  + EL        D            + +
Sbjct: 49  FVTYFPSSQKPFYMSRTSDDRYAECFDLIAPYVGELAGGSLRETDAD----------KLR 98

Query: 296 KKIYNET--YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            +   E   + +D   L   +  P ++G  +G +RL+  + G  NI + +  P 
Sbjct: 99  ARGCGEALKWYVD---LRS-SGHPPTAGFGIGMERLMQSLFGIVNIKDTVAFPR 148


>gi|161671290|gb|ABX75497.1| asparaginyl-tRNA synthetase [Lycosa singoriensis]
          Length = 249

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 65/178 (36%), Gaps = 19/178 (10%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIR 60
           Q+ ++    R  +  +   +  R+ +    R ++ EN +IE+   +L      G  T   
Sbjct: 62  QLDNRRLMLRGENLSK--IVAIRSFLMQCFRSHYFENHYIEVTPPTLVQSQVEGGST--- 116

Query: 61  AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTM 119
                L   D   +  YL  S +   + ++ +    +FC A ++R  +     H  E+T 
Sbjct: 117 -----LFKLDFFGQEAYLTQSSQLYLETVIPS-LGDVFCIAMSYRAEQSRTRRHVAEYTH 170

Query: 120 LEWYRAHESYEQLMKDCMNII-----RCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           +E      ++  L+    ++I     R       Q ++ F      P      +  A+
Sbjct: 171 IEAECPFITFNDLLDRLEDLICDVVDRVLKSPIGQLVYEFNPEFKAPKKPFRRMNYAD 228


>gi|57641485|ref|YP_183963.1| asparagine synthetase A [Thermococcus kodakarensis KOD1]
 gi|57159809|dbj|BAD85739.1| asparaginyl-tRNA synthetase-related protein (N-truncation)
           [Thermococcus kodakarensis KOD1]
          Length = 299

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 93/339 (27%), Gaps = 69/339 (20%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN---ETHIRAFSTELIIQDHIRKPL 76
           P +  +      L        F  +  + L         +          I        L
Sbjct: 13  PVVRVQTEAIRYLTSELTSRGFRWLLPVMLSSITDPLWPDPAASKMRAPEIE--AYGSKL 70

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ---GCLHQPEFTMLEWYRAHESYEQLM 133
            L  S     +  +A G EKIF  +   R  E+      H  EFT L++  +H S + +M
Sbjct: 71  KLMHSMILHKQFAVAMGLEKIFVLSPNIRLEERESDDGRHAYEFTQLDFEISHASMDDVM 130

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNP-FSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           +    +I          ++              +  T+ E    + + +           
Sbjct: 131 RLVEELIVGLFRELRGPVWETFERELPRVKRPFKRFTLEEVIEEFGSEE----------- 179

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
                     +A   +      +DI       ++            D Y           
Sbjct: 180 ----------KASREMGEPFWITDIPREFYDREV-----DGVWRNYDLYLPE-------- 216

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK-EMQEKKKIYNETYPIDEDFLA 311
                                   E+    E+   +EK + + ++   +E       +L 
Sbjct: 217 ---------------------GYGEVSSGGEREWEYEKIQRKIREAGLSEEAFRP--YLE 253

Query: 312 -CLTEM-PQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                M   S+G  +G +RLV  + GA +I EV   P  
Sbjct: 254 VAKAGMLKPSAGAGIGIERLVRYIVGAKHIAEVQPFPRV 292


>gi|301321351|gb|ADK69994.1| conserved domain protein [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 86

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 308 DFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
            F+       P  SGIA G DR+ M++T A +I +VI  P
Sbjct: 18  WFMNAYKYGAPYHSGIAWGLDRIAMILTNAQSIRDVIAFP 57


>gi|294660339|ref|NP_853042.2| asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284811996|gb|AAP56610.2| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930519|gb|ADC30458.1| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 346

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 45/339 (13%), Positives = 94/339 (27%), Gaps = 30/339 (8%)

Query: 15  HYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSP----GNETHIRAFSTELIIQD 70
           + R    L   ++I      +   N    ++      S     G  +  + +    I + 
Sbjct: 24  NERYSNLLKLFSVINKLTYIWMENNNVEIVNLPITTQSVTSPMGLGSDSKPYKV--ISKS 81

Query: 71  HIRKPLYLQTSPEFSCKKLLAA-GEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
           ++    YL  S +F  + +L A     +    + +R  +    H  +F   E      + 
Sbjct: 82  NLNYEFYLADSMQFHLELMLRAKDISSVGYITNTFRGEQVDNRHLHQFNHFEIEMLG-NL 140

Query: 130 EQLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
               +  ++ I+       +K  +     N N  +  +     E        D   +L  
Sbjct: 141 NNCKEKIIDYIKFIVNELIKKHKNLIDFFNTNNSNRLKKWLSNEVID--LKHDHVISLLK 198

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
            + P         +   I   +      + ++     I           L  +P      
Sbjct: 199 LEYPVGIEKIYLNKNDFIESVNSKGEQYLINKFKNNII----------WLSNFPWQLVPF 248

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                 D        L      + +     +   E       +   K K   +    D  
Sbjct: 249 YQKIEGDY-AINSDLLIGIGETVGSG-QRCITYKE-----TYDSILKHKNNPK--HYDWY 299

Query: 309 FLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               L    ++SG  +G +RLV+ +    +I  V   P 
Sbjct: 300 LKMKLESELETSGFGLGLERLVLFIIDEKDIRNVQLLPR 338


>gi|48477964|ref|YP_023670.1| asparagine synthetase A [Picrophilus torridus DSM 9790]
 gi|48430612|gb|AAT43477.1| asparaginyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 317

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 49/347 (14%), Positives = 99/347 (28%), Gaps = 62/347 (17%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTEL 66
           +   +     + R  +   + I+  + E+     +IEI    +   P  +          
Sbjct: 18  KHLGD----EKVRHAIKVGSDIRGYISEFLRGKGYIEI-PPVIIS-PLTDPLNHP--VYD 69

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG----EQGCLHQPEFTMLEW 122
                    L+L  S     K++     +KIF  +   R       +   H  EFT ++ 
Sbjct: 70  PKISAYGGDLWLTKSM-IFHKQIAVQSLKKIFIMSPNIRLEVEEKSKTGRHLYEFTQVDI 128

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDL 182
               ++ E++M    +II    +   +              + +                
Sbjct: 129 EALEKTREEMMDLAEDIIIYTIKKIKENDADELKFFKRSLPDFK---------------- 172

Query: 183 GTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYP 242
                   +P R + Y++A++          +   F R      E ++       L   P
Sbjct: 173 --------KPFRKITYMEAEKK---------YGKDFER------ELSMESKEPVWLIDIP 209

Query: 243 APESALANI-YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF-EKEMQEKKKIYN 300
                  +  Y   P   +  +L            E     E+ +       +  KK   
Sbjct: 210 LEAREFYDREYDDKPGILRDMDLIWP-----EGYQEASSGGEREYELPRIIERIHKKGQT 264

Query: 301 ETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
           E     + F+      +  S+G  +G +R    V G   I +    P
Sbjct: 265 EEQF--KWFIELARHGIKMSAGFGIGIERFTRYVCGLERIEDTNPFP 309


>gi|153846279|ref|ZP_01993849.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149744941|gb|EDM56285.1| lysyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 92

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 33/59 (55%)

Query: 24 KRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
          +R  + +++R++F E Q +E+D+ ++ ++   + H+  F TE + +   ++      SP
Sbjct: 1  QRATLIAAIRQFFAERQVMEVDTPAMSHATVTDIHLHTFQTEFVGRQFAKRTRASSISP 59


>gi|297835780|ref|XP_002885772.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297331612|gb|EFH62031.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 119

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 15/123 (12%)

Query: 13  DFHYRRR-----------PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
           +  YR+R             LL ++ +   ++ +     F+E++++ +  S G    +  
Sbjct: 1   ENRYRKRYLDLMINEDIHNILLGKSNVMKYIQTFLSNKIFVEVETLVMSVSVGGGAVL-P 59

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE 121
           +S       +     YL+ + E   KKL+  G  ++F     +RN  +           +
Sbjct: 60  YSV---YHKNKNIKTYLRIAQEIYLKKLVVGGFGRVFEIGKQFRNDRENKTTHVLSYQCD 116

Query: 122 WYR 124
             R
Sbjct: 117 SER 119


>gi|284931564|gb|ADC31502.1| Asparaginyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 311

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 76/278 (27%), Gaps = 24/278 (8%)

Query: 72  IRKPLYLQTSPEFSCKKLLAA-GEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
           +    YL  S +F  + +L A     +    + +R  +    H  +F   E      +  
Sbjct: 48  LNYEFYLADSMQFHLELMLRAKDISSVGYITNTFRGEQVDNRHLHQFNHFEIEMLG-NLN 106

Query: 131 QLMKDCMNIIRCAAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              +  ++ I+       +K  +     N N  +  +     E        D   +L   
Sbjct: 107 NCKEKIIDYIKFIVNELIKKHKNLIDFFNTNNSNRLKKWLSNEVID--LKHDHVISLLKL 164

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
           + P         +   I   +      + ++     I           L  +P       
Sbjct: 165 EYPVGIEKIYLNKNDFIESVNSKGEQYLINKFKNNII----------WLSNFPWQLVPFY 214

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                D        L      + +     +   E       +   K K   +    D   
Sbjct: 215 QKIEGDY-AINSDLLIGIGETVGSG-QRCITYKE-----TYDSILKHKNNPK--HYDWYL 265

Query: 310 LACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
              L    ++SG  +G +RLV+ +    +I  V   P 
Sbjct: 266 KMKLESELETSGFGLGLERLVLFIIDEKDIRNVQLLPR 303


>gi|326665936|ref|XP_001335682.3| PREDICTED: hypothetical protein LOC795494 [Danio rerio]
          Length = 1612

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/365 (13%), Positives = 106/365 (29%), Gaps = 41/365 (11%)

Query: 4    IPSQPWWNRDFHYRR-------RPFLLKRNMIQSSLREYFVEN---QF-IEIDSMSLQYS 52
            IP Q W +   H          R     +N +  S  EYF       + +   +     +
Sbjct: 1270 IPPQSWQDPLTHASSAINSKWYRNLFQIQNTLFHSTVEYFNNKCKYGYAL---TPITTDT 1326

Query: 53   PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG--EEKIFCFAHAWRNGEQG 110
              +   + +  +E +  + + + +YL  S +F  +  L         +  + ++R  +  
Sbjct: 1327 ISSPMGLGS-DSEPVFVNMLGQDVYLADSMQFVLEYFLRFHDGLPGAYYVSPSFRGEDPD 1385

Query: 111  CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITV 170
              H  +F  +E             D    I         K    Q+ +    +  +    
Sbjct: 1386 ATHLNQFYHVECELLG------DMDVAMSIAEGYVAHLTKAMLKQHSDIILNTAGKLSHA 1439

Query: 171  AEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNL 230
             E             LD           L+  Q G        +    +R   + +    
Sbjct: 1440 QELLKNLEGPLPRVALDQAIHIMPSSDCLEWVQEG-----QPQFGRKLTRKGEKVLIEKY 1494

Query: 231  GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
            G         +       A I  +     K  +L    +       E     +       
Sbjct: 1495 GGAVWLTEMDHLGVPFYQAYIEDSGQSKAKAADLLL-GLGETVGLGERHSTPDMV----- 1548

Query: 291  EMQEKKKIYNETYPID--EDFLACLTEMPQ-SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                ++ + +   P D  + ++     MP  +SG  MG +R +  +   N++ ++   P 
Sbjct: 1549 ----REALQHHAVPEDSYKWYINMRQVMPLLTSGWGMGTERYLCWLLQHNDVRDMQIIPR 1604

Query: 348  SQSNQ 352
             ++ +
Sbjct: 1605 LKAKK 1609


>gi|218291276|ref|ZP_03495252.1| Aspartyl-tRNA synthetase-like protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218238824|gb|EED06036.1| Aspartyl-tRNA synthetase-like protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 132

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 300 NETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQE 353
            E       FL           GIA G D  +ML TGA ++ +V+  P   S  +
Sbjct: 50  EEAQEKFVFFLNAFEYGTSPHVGIAFGLDSFIMLFTGAKSMCDVLAFPKMASGTD 104


>gi|225468612|ref|XP_002264582.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 613

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 85/282 (30%), Gaps = 22/282 (7%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
             +D   +  YL  S     +    +    ++ F   +R       H  E  M+E   A 
Sbjct: 346 FSKDFFSRETYLTVSGRLHLQSYACS-LGNVYSFGPRFRAE--SMKHVAEMWMVELEMAF 402

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              E  M    + ++       + +        N FS+    T  +     + I      
Sbjct: 403 SQLEDAMTCAEDFLK----FLCKSVLENCVGEINFFSKRFDKTNVDRLQ--SIISSSFER 456

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
            +  Q    L  +   +   +V    + ++     L+ +I     I        YP    
Sbjct: 457 ISYTQAVDALKQVTDNKFETKVEWGISLTEEHETYLVGEIYKRPVII-----FNYPKKIK 511

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPI 305
                   D      F++    +             E+ +     ++E      E  + +
Sbjct: 512 PFYMRVNDDGETVAAFDVV---VPKAGTLIRGSQNEERMNMLSTRIKELGIRSEEYEWYM 568

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           D           ++SG ++ F+ +V+  TG  N+ +VI  P 
Sbjct: 569 DLR----RHGTVKNSGFSVAFEHVVLFATGLVNVADVIPFPR 606


>gi|169838303|ref|ZP_02871491.1| hypothetical protein cdivTM_14586 [candidate division TM7
           single-cell isolate TM7a]
          Length = 52

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +DE F   L   MP + G+  G DRL++++T +++I EVI  
Sbjct: 1   MDETFYHTLRVGMPPAGGVGFGIDRLLIILTDSSDIIEVIPF 42


>gi|147845769|emb|CAN82202.1| hypothetical protein VITISV_011129 [Vitis vinifera]
          Length = 597

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 85/282 (30%), Gaps = 22/282 (7%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
             +D   +  YL  S     +    +    ++ F   +R       H  E  M+E   A 
Sbjct: 330 FSKDFFSRETYLTVSGRLHLQSYACS-LGNVYSFGPRFRAE--SMKHVAEMWMVELEMAF 386

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              E  M    + ++       + +        N FS+    T  +     + I      
Sbjct: 387 SQLEDAMTCAEDFLK----FLCKSVLENCVGEINFFSKRFDKTNVDRLQ--SIISSSFER 440

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
            +  Q    L  +   +   +V    + ++     L+ +I     I        YP    
Sbjct: 441 ISYTQAVDALKQVTDNKFETKVEWGLSLTEEHETYLVGEIYKRPVII-----FNYPKKIK 495

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE-TYPI 305
                   D      F++    +             E+ +     ++E      E  + +
Sbjct: 496 PFYMRVNDDGETVAAFDVV---VPKAGTLIRGSQNEERMNMLSTRIKELGIRSEEYEWYM 552

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           D           ++SG ++ F+ +V+  TG  N+ +VI  P 
Sbjct: 553 DLR----RHGTVKNSGFSVAFEHVVLFATGLVNVADVIPFPR 590


>gi|301089372|ref|XP_002894992.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262104063|gb|EEY62115.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 283

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 63/228 (27%), Gaps = 41/228 (17%)

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
           +   +  +       +  A          +     P    E  +          +DL   
Sbjct: 86  YFDQDATLAQSPQTYKHMACDVASLE---RVFEIGPGFRAETSSTQRHMCELVGLDL--- 139

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                      + ++A    +    +     +                   ILD++P   
Sbjct: 140 ----------EMTIKAHYHKVLTEKEKWLGRLI---------KEKYDTDFYILDKFPLAV 180

Query: 246 SALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYN 300
                   P D R++  +++     E+      + DP     R ++    +   +  IY+
Sbjct: 181 RPFYTMPDPTDKRWSNSYDIMIRGEEMVLYAQHVHDPKLLMERMDELGVPQESMRNYIYS 240

Query: 301 ETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                    L  L       G  +G +R+VML  G  NI++    P  
Sbjct: 241 LR-------LDSL----PHGGGGIGLERVVMLYLGLGNISKSSMFPRD 277



 Score = 53.1 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/178 (12%), Positives = 44/178 (24%), Gaps = 14/178 (7%)

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLL-AAGEEKIF 98
            ++EI +  L       +    F+       +  +   L  SP+         A  E++F
Sbjct: 61  DYVEIHTPKLVGGASG-SGANYFT-----LKYFDQDATLAQSPQTYKHMACDVASLERVF 114

Query: 99  CFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
                +R        H  E   L+     +++   +                    +   
Sbjct: 115 EIGPGFRAETSSTQRHMCELVGLDLEMTIKAHYHKVLTEKEKWLGRLIKEKYDTDFYILD 174

Query: 158 NCNPFSEPEYITVAEAFARYANIDLGTTLDNP------DQPDRHLLYLQAQQAGIRVA 209
                  P Y        R++N                   D  LL  +  + G+   
Sbjct: 175 KFPLAVRPFYTMPDPTDKRWSNSYDIMIRGEEMVLYAQHVHDPKLLMERMDELGVPQE 232


>gi|242241686|ref|ZP_04796131.1| conserved hypothetical protein [Staphylococcus epidermidis W23144]
 gi|242234862|gb|EES37173.1| conserved hypothetical protein [Staphylococcus epidermidis W23144]
          Length = 75

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 30/76 (39%), Gaps = 8/76 (10%)

Query: 36  FVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
             ++ F++I++  L   +P     ++            + +      SP+   + L+ +G
Sbjct: 1   MDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQ------SPQLFKQLLMMSG 54

Query: 94  EEKIFCFAHAWRNGEQ 109
            ++ +     +R+ + 
Sbjct: 55  FDRYYQIVKCFRDEDL 70


>gi|297519738|ref|ZP_06938124.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 127

 Score = 63.1 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 6/131 (4%)

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVN 158
               +RN      H PEFTM+E Y A+  Y+ L++   ++ R  A+ +  +   ++ +V 
Sbjct: 1   INRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVT 60

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +     E +T+ EA  +Y         D  D  +       A+  GI V        I 
Sbjct: 61  LDFGKPFEKLTMREAIKKY-----RPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIV 115

Query: 219 SRILIEKIEPN 229
           + I  E  E +
Sbjct: 116 TEIFEEVAEAH 126


>gi|149003236|ref|ZP_01828132.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147758696|gb|EDK65693.1| asparaginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 72

 Score = 63.1 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINE 341
            +   ++  + +  ++  +     E +L           G  +G +R+V    G  +I E
Sbjct: 1   MREEDYDALVAKMDELGMDRTEY-EFYLDLRKYGTVPHGGFGIGIERMVTFAAGTKHIRE 59

Query: 342 VIWTPFS 348
            I  P  
Sbjct: 60  AIPFPRM 66


>gi|47195986|emb|CAF87751.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 164

 Score = 63.1 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 11/90 (12%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            L  R+ +    R++F    + EI   +L      G  T        L   ++  +  YL
Sbjct: 53  ILRVRSTVTQCFRDHFFSRGYYEIAPPTLVQTQVEGGST--------LFSLNYFGEQAYL 104

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
             S +   +  + A     FC A ++R  +
Sbjct: 105 TQSSQLYLETCIPA-LGDTFCIAQSYRAEQ 133


>gi|212695606|ref|ZP_03303734.1| hypothetical protein ANHYDRO_00123 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677484|gb|EEB37091.1| hypothetical protein ANHYDRO_00123 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 131

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 18/26 (69%)

Query: 325 GFDRLVMLVTGANNINEVIWTPFSQS 350
           G DRL+M++TG ++I +V+  P  + 
Sbjct: 1   GIDRLIMILTGQHSIRDVLLFPTMKP 26


>gi|301091450|ref|XP_002895910.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262096098|gb|EEY54150.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 255

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 51/158 (32%), Gaps = 25/158 (15%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
            + ++A    +    +     +                   ILD++P           P 
Sbjct: 112 WMTIKAHYHKVLTEKEKWLGRLI---------KEKYDTDFYILDKFPLAVRPFYTMPDPT 162

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           D R++  +++     E+      + DP     R ++    +   +  IY+         L
Sbjct: 163 DKRWSNSYDMMIRGEEMVLCAQHVHDPKLLMERMDELGVPQESMRNYIYSLR-------L 215

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             L       G  +G +R+VML  G  NI++    P  
Sbjct: 216 DSL----PHGGGGIGLERVVMLYLGLGNISKSSMFPRD 249


>gi|307135961|gb|ADN33821.1| aspartyl-tRNA synthetase [Cucumis melo subsp. melo]
          Length = 460

 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 10/118 (8%)

Query: 76  LYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
             L  SP+   + L+ +G +K +  A  +R+ +     QPEFT L+   +  + E +++ 
Sbjct: 249 FALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRADRQPEFTQLDMELSFTTLEDMLRL 308

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
             ++IR                     +    +T AEA +RY   D   T  +    D
Sbjct: 309 NEDLIRKVFWEVKGVQLP---------NPFPRLTYAEAMSRY-GSDRPDTRFDLQLND 356


>gi|297519657|ref|ZP_06938043.1| lysyl-tRNA synthetase [Escherichia coli OP50]
          Length = 127

 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 6/131 (4%)

Query: 100 FAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE-VANQKIFSFQNVN 158
               +RN      H PEFTM+E Y A+  Y  L++   ++ R  A+ V      ++    
Sbjct: 1   INRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHV 60

Query: 159 CNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIF 218
            +     E +T+ EA  +Y         D  D  +       A+  GI V        I 
Sbjct: 61  FDFGKPFEKLTMREAIKKY-----RPETDMADLDNFDAAKALAESIGITVEKSWGLGRIV 115

Query: 219 SRILIEKIEPN 229
           + I  E  E +
Sbjct: 116 TEIFDEVAEAH 126


>gi|290475172|ref|YP_003468058.1| putative Asparagine--tRNA ligase [Xenorhabdus bovienii SS-2004]
 gi|289174491|emb|CBJ81285.1| putative Asparagine--tRNA ligase [Xenorhabdus bovienii SS-2004]
          Length = 335

 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 83/281 (29%), Gaps = 30/281 (10%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE-- 127
           +      YL  S +F  + +L   ++ ++     +R  EQ   H  +F   E        
Sbjct: 74  NLGGVDTYLADSMQFLLEYVLRLNDKGVYYLMPTFRGEEQDKRHLNQFYHAESEIIGSLD 133

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
              +L    +  +        + + S          +   +       R+         D
Sbjct: 134 DVIELASSYVTYLCDYFLENERALLSQFTDELEHLRKLSMLKGNIPRVRFT--------D 185

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
             +  +    Y    ++  +   ++    +               +    L  +P+    
Sbjct: 186 AVELLNNDSRYFSEHESEFKQITNEGEQKLIELF-----------DGAVWLTHFPSLSVP 234

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                 ++  ++   +L    I       E     E       E    +K+  E Y   E
Sbjct: 235 FYQADASEQGYSLTADL-LMGIGETLGAGERNTYAEN----VVENLNVRKVSREEY---E 286

Query: 308 DFLACLTEMP-QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
            ++     MP ++SG  MG +R ++ +   ++I +    P 
Sbjct: 287 WYIRMRELMPLRTSGFGMGVERFILWLINHDDIRDCQLLPR 327


>gi|146332369|gb|ABQ22690.1| asparaginyl-tRNA synthetase-like protein [Callithrix jacchus]
          Length = 211

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 46/149 (30%), Gaps = 9/149 (6%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFT 259
            ++  I+      +          +      IN   +L R+P    S      P DPR T
Sbjct: 63  LKEHDIKKEDGTFYEFGEDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLT 122

Query: 260 KRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
           +  + L     E+      + D  E    ++     ++ I    Y    D          
Sbjct: 123 ESVDVLMPNVGEIVGGSMRIWDNEEILAGYK-----REGIDPTPYYWYTD--QRKYGTCP 175

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             G  +G +R +  +    +I +V   P 
Sbjct: 176 HGGYGLGLERFLTWILNRYHIRDVCLYPR 204


>gi|291336621|gb|ADD96167.1| hypothetical protein [uncultured organism MedDCM-OCT-S05-C185]
          Length = 205

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQ-YSPGNET-HIRAFSTELIIQDH 71
              R    ++ R+ + SS+R   ++  F+E  +  L   SP      +            
Sbjct: 134 RRERIHNNIITRSNVISSIRRRMIDRGFVEFQTPILTASSPEGARDFLVPSRLHPGKFYA 193

Query: 72  IRK 74
           + +
Sbjct: 194 LPQ 196


>gi|15674654|ref|NP_268828.1| asparagine synthetase A [Streptococcus pyogenes M1 GAS]
 gi|71910275|ref|YP_281825.1| asparagine synthetase A [Streptococcus pyogenes MGAS5005]
 gi|13621769|gb|AAK33549.1| hypothetical protein SPy_0559 [Streptococcus pyogenes M1 GAS]
 gi|71853057|gb|AAZ51080.1| hypothetical protein M5005_Spy0462 [Streptococcus pyogenes
           MGAS5005]
          Length = 274

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/274 (10%), Positives = 79/274 (28%), Gaps = 30/274 (10%)

Query: 72  IRKPLYLQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                YL  S +F  + +L    +  +      +R       H  +F   E         
Sbjct: 15  FDVDTYLADSMQFHLEYILRLFPKSGVHYLMPTFRGEAVDHRHLSQFYHSECEIEG-DLH 73

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M      I+       ++                  ++       ++++       P 
Sbjct: 74  YVMNLVDRYIKFLVSEILREC---------------RDSIFAITKDVSHLESFIDRKIPI 118

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                   +   +      +D+    + + +  +K+  +        +  YP        
Sbjct: 119 ITFEEACTILENEIDSLEYNDEHHFYVLTDVGEKKLMEH--FEGVVWVKNYPCKSVPFYQ 176

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
            +  D  F    +L            E +   E+   +E+ ++    +  +       +L
Sbjct: 177 RFSTDHLFAYNADLLL-------GIGETVGCGERCETYEEVVENMNYLQVDASEY-SWYL 228

Query: 311 ACLTEMPQ--SSGIAMGFDRLVMLVTGANNINEV 342
             + +     SSG  +G +RL+  +   +++ +V
Sbjct: 229 E-MKKTRPMKSSGFGLGVERLIAWILKCDDVRKV 261


>gi|238613610|ref|XP_002398484.1| hypothetical protein MPER_00915 [Moniliophthora perniciosa FA553]
 gi|215475115|gb|EEB99414.1| hypothetical protein MPER_00915 [Moniliophthora perniciosa FA553]
          Length = 144

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/139 (12%), Positives = 38/139 (27%), Gaps = 6/139 (4%)

Query: 211 DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIE 270
           +    D  +     ++     I     L  +PA           D     +  L      
Sbjct: 3   EHAVGDDIAEAAERQM--TDIIGKPVFLYGFPAELKPFYMKKMPDQGGNDKLMLTESCDL 60

Query: 271 LCNACDELLDPIEQRHRFEKEMQE--KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDR 328
           L     E++    +   +++ +    ++ I    Y    D            G  +G +R
Sbjct: 61  LMPYVGEIVGGSMRIDDYDELVAAYKREGIDPAAYYWYTD--QRKYGTCPHGGYGLGVER 118

Query: 329 LVMLVTGANNINEVIWTPF 347
            +  +     + E +  P 
Sbjct: 119 FLAWLANRYTVRECVLYPR 137


>gi|14520464|ref|NP_125939.1| asparagine synthetase A [Pyrococcus abyssi GE5]
 gi|5457679|emb|CAB49170.1| asnS-like asparaginyl-tRNA synthetase related protein [Pyrococcus
           abyssi GE5]
          Length = 294

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/338 (14%), Positives = 94/338 (27%), Gaps = 80/338 (23%)

Query: 24  KRNMIQSSLREYFVENQFIEIDSMSLQYS-------PGNETHIRAFSTELIIQDHIRKPL 76
            +  I   + ++F +  F  +  + L          P  E  IR    ++         +
Sbjct: 17  IQTKILDYMTKFFTDRGFKWLLPIMLSPITDPLWPDPAGE-GIRPAEVDV-----YGVRM 70

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ---GCLHQPEFTMLEWYRAHESYEQLM 133
            L  S     +  +A G EKIF  +   R   +      H  EFT L++       + +M
Sbjct: 71  RLTHSMILHKQLAIAMGLEKIFVLSPNIRLESRRKDDGRHSYEFTQLDFEIEGAKMKDVM 130

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           +    +I      A                E       + +               D  D
Sbjct: 131 RLIEELIYGLFRKA----------EEWTGREFPRARHFKVY---------------DYKD 165

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
               +   ++A + +        I +           G+                     
Sbjct: 166 ILEEFGSDEKASMEMEEPFW---IVNIPREFYDREENGVWK------------------- 203

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKKIYNETYPIDEDFLA- 311
                   ++L            E+    E+   +EK + + +     E       +L  
Sbjct: 204 -------NYDLILPY-----GYGEVSSGGEREWEYEKIVAKIRAAGLKEDSFRP--YLEI 249

Query: 312 CLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                +  S+G  +G +RLV  + GA +I EV   P  
Sbjct: 250 ARAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQPFPRV 287


>gi|307297608|ref|ZP_07577414.1| tRNA synthetase class II (D K and N) [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916868|gb|EFN47250.1| tRNA synthetase class II (D K and N) [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 312

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 90/333 (27%), Gaps = 62/333 (18%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
             ++ I      +     F+E+    +        H            +  +   L  S 
Sbjct: 25  KVKSAILGEASSFLRGKNFVELLPTIVSPITDPLNH----EVHTTRFTYYDQEYRLTQSM 80

Query: 83  EFSCKKLLAAGEEKIFCFAHAWRNGEQ----GCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
               K+L     E+IF  +   R           H  EF+ ++    +            
Sbjct: 81  -IFHKQLACKSFERIFIVSPNVRLETSEKALSGRHLFEFSQIDLEIRNA----------- 128

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
                           +        E   ITV  +  R  + ++     +P  P +    
Sbjct: 129 ----------------KREQIMSLIEDLIITVMLSVKRNCSEEMDFLSSDPSIPSKPFAT 172

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           ++       +   + +   F  IL               L  +P  E    ++   D R 
Sbjct: 173 VKF------MDAYEQYGKDFETILSASFSE------PFWLIDFPIWEREFYDLLSEDKRT 220

Query: 259 TKRFELYACNIELCNACDELLDPIEQR---HRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
            K  +L   +        E L   E+     R  + M  K     E       ++     
Sbjct: 221 LKDMDLILPH-----GFGETLSGGEREWEHQRILERMGFK-GNDPEEL---SWYMDIAEG 271

Query: 316 --MPQSSGIAMGFDRLVMLVTGANNINEVIWTP 346
             +  ++G  +G +RL   V   +N++     P
Sbjct: 272 GELVPTAGCGIGVERLTRYVCSLDNVSRTRLFP 304


>gi|94993878|ref|YP_601976.1| asparagine synthetase A [Streptococcus pyogenes MGAS10750]
 gi|94547386|gb|ABF37432.1| hypothetical protein MGAS10750_Spy0482 [Streptococcus pyogenes
           MGAS10750]
          Length = 274

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/274 (10%), Positives = 79/274 (28%), Gaps = 30/274 (10%)

Query: 72  IRKPLYLQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                YL  S +F  + +L    +  +      +R       H  +F   E         
Sbjct: 15  FDVDTYLADSMQFHLEYILRLFPKSGVHYLMPTFRGEAVDHRHLSQFYHSECEIEG-DLH 73

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M      I+       ++                  ++       ++++       P 
Sbjct: 74  DVMNLVDRYIKFLVSEILREC---------------RDSIFAITKDVSHLESFIDRKIPI 118

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                   +   +      +D+    + + +  +K+  +        +  YP        
Sbjct: 119 ITFEEACTILENEIDSLEYNDEHHFYVLTDVGEKKLMEH--FEGVVWVKNYPCKSVPFYQ 176

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
            +  D  F    +L            E +   E+   +E+ ++    +  +       +L
Sbjct: 177 RFSTDHLFAYNADLLL-------GIGETVGCGERCETYEEVVENMNYLQVDASEY-SWYL 228

Query: 311 ACLTEMPQ--SSGIAMGFDRLVMLVTGANNINEV 342
             + +     SSG  +G +RL+  +   +++ +V
Sbjct: 229 E-MKKTRPMKSSGFGLGVERLIAWILKCDDVRKV 261


>gi|533097|gb|AAA80003.1| asparaginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 77

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLV 333
             + + D      R ++       + ++ Y    +           SG  +G +R V  +
Sbjct: 4   GSERIHDMELLESRLKE-----HGLDSDAYKWYAELRK--YGSVPHSGFGLGLERTVAWI 56

Query: 334 TGANNINEVIWTPFS 348
           +GA ++ E I  P  
Sbjct: 57  SGAPHVRETIPFPRL 71


>gi|238912809|ref|ZP_04656646.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Tennessee str. CDC07-0191]
          Length = 49

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 21/52 (40%), Gaps = 3/52 (5%)

Query: 4  IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
          +     W         P LLKR  I + +R +F +   +E+++  +  +   
Sbjct: 1  MSETATWQPSASI---PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVT 49


>gi|223985863|ref|ZP_03635902.1| hypothetical protein HOLDEFILI_03208 [Holdemania filiformis DSM
           12042]
 gi|223962159|gb|EEF66632.1| hypothetical protein HOLDEFILI_03208 [Holdemania filiformis DSM
           12042]
          Length = 51

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWT 345
            +G  +GF+R +M VTG  NI +VI  
Sbjct: 16  HAGFGLGFERFIMYVTGMQNIRDVIPF 42


>gi|198465135|ref|XP_002134919.1| GA23746 [Drosophila pseudoobscura pseudoobscura]
 gi|198150029|gb|EDY73546.1| GA23746 [Drosophila pseudoobscura pseudoobscura]
          Length = 158

 Score = 60.4 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 49/157 (31%), Gaps = 9/157 (5%)

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANI 251
           D        ++  +       +          + +    IN   +L R+P    S   + 
Sbjct: 2   DYAAAIEWLKKNNVTKDDGTFYEFGEDIPEAPERKMTDTINEPILLCRFPVAIKSFYMSR 61

Query: 252 YPADPRFTKRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL 310
            P D R T+  + L     E+      + D  E  + ++     ++ I    Y    D  
Sbjct: 62  CPEDKRLTESVDVLLPNVGEIVGGSMRIWDSEELLNGYK-----REGIDPTPYYWYTD-- 114

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             +       G  +G +R +  +    +I EV   P 
Sbjct: 115 QRIYGTIPHGGYGLGLERFLCWLLNRYHIREVCLYPR 151


>gi|163785430|ref|ZP_02180041.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879299|gb|EDP73192.1| lysyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 76

 Score = 60.0 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 39/74 (52%)

Query: 20 PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
            L+ ++ +  S+R+YF +    E+ +  LQ  P  +++I     E++ +   +   YL 
Sbjct: 2  NLLIAKSRVLKSIRDYFDKTGAFEVITDILQAFPNLDSNIYPVEVEVVNEKGEKLKKYLH 61

Query: 80 TSPEFSCKKLLAAG 93
          TSPE + KKLLA  
Sbjct: 62 TSPEIAMKKLLAKY 75


>gi|71754381|ref|YP_086759.2| asparagine synthetase A [Agrobacterium tumefaciens]
 gi|222112709|ref|YP_002559296.1| Agrocin84-synthetase [Agrobacterium radiobacter K84]
 gi|71558921|gb|AAS02120.2| probable asparaginyl-tRNA synthetase [Agrobacterium tumefaciens]
 gi|221728486|gb|ACM31458.1| Agrocin84-synthetase [Agrobacterium radiobacter K84]
          Length = 353

 Score = 59.7 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/350 (12%), Positives = 97/350 (27%), Gaps = 38/350 (10%)

Query: 5   PSQPWWNRDFHYRR-------RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNET 57
           P   W   + H  +       R     R  I    R +F       +       S  +  
Sbjct: 21  PPSSWREPENHLSQLITSPWYRLLHEVRCSIDGGTRIFFEGFGADNLHVPVTTGSVSSPM 80

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
            + + S  +       K +YL  S +F  +  +      ++  + ++R  +    H  EF
Sbjct: 81  GLGSDSLPVRAI-IQDKEIYLADSLQFLLELGIRIARRPVYYISSSFRGEDVDPTHLAEF 139

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE-AFAR 176
           +  E         +++      +   A+    K       +    +  + +   +  F R
Sbjct: 140 SHSEVEIEG-DLNEIIDLGGKYVSHLAQTLLDKCEGQILNSVGSLNHLQDVAKLKGNFPR 198

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
             + D    L +  +  + LL   A                             G     
Sbjct: 199 LRHSDALELLHSEPRATKELLPGVA------------------------TITRAGERQIM 234

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
            +   P   + +        +  +       + +L     E+L   E+   F    +   
Sbjct: 235 EVIGSPVWITHMPRKSCPFYQRPEEGSDACLSADLLLGPGEILGAGERCEDFLSTSRSVA 294

Query: 297 KIYNETYPIDEDFLACLTEMPQ--SSGIAMGFDRLVMLVTGANNINEVIW 344
               +  P  + +L  +       ++G  +G +R +M      +I +   
Sbjct: 295 DHEVDPSPY-QWYLE-MKRSSPLRTAGFGLGIERFIMWALDVGDIRDCCL 342


>gi|297808575|ref|XP_002872171.1| hypothetical protein ARALYDRAFT_910616 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318008|gb|EFH48430.1| hypothetical protein ARALYDRAFT_910616 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 67

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 292 MQEKKKIYNETYPIDEDFLA-CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           M+  +++        E ++        + SG  +G +R+++  TG +NI +VI  P 
Sbjct: 5   MERMEEMGLPIKQY-EWYIDLRRHGTVKHSGFGLGLERMLLFATGMDNIRDVIPFPR 60


>gi|262046466|ref|ZP_06019428.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260573337|gb|EEX29895.1| asparaginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 88

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 6/78 (7%)

Query: 274 ACDELLDPIEQRHRFE--KEMQEKKKIYNETYPIDEDFLACLT-EMPQSSGIAMGFDRLV 330
              E+    E+   +E  K+      +  E Y     +L          SG  MGF+R +
Sbjct: 8   GYGEIFGGSEREGNYEILKQQILDAGLNLEDYQ---WYLDLRKFGGVPHSGFGMGFERTI 64

Query: 331 MLVTGANNINEVIWTPFS 348
             V   ++I E I  P  
Sbjct: 65  AWVCHLDHIREAIPFPRL 82


>gi|125536383|gb|EAY82871.1| hypothetical protein OsI_38084 [Oryza sativa Indica Group]
          Length = 615

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/279 (11%), Positives = 76/279 (27%), Gaps = 24/279 (8%)

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG---CLHQPEFTMLEWYRAHES 128
             +P YL        +    A    ++ F+  ++   +         E   ++   A   
Sbjct: 347 FHRPAYLTPCHTLHLETYACA-LSSVYTFSPVFQAESESLDSDRSLAERWTVDVELAFAE 405

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            E  +    + ++      ++                   +     A  + I+   +   
Sbjct: 406 LEDAISCAEDCVKSLCSTVSKDCSDELKFLS---------SNQAGDATSSVIEAAVSSPW 456

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                   +    Q                SR  +  +  +L      I+  YP      
Sbjct: 457 QKIKYTEAVNTLLQVTDKTFESKLELGMPLSREHLSYLADDLYKKPV-IIYDYPKQLKPF 515

Query: 249 ANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                 D +    F+L    +  +     +         R E+   + +++        E
Sbjct: 516 YARLKEDLKTVSAFDLVVPKVGIVACGAQKEERMDNLTSRIEESGLQVEQL--------E 567

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            +L        + SG ++  + L++ VTG  ++ + I  
Sbjct: 568 WYLDTRRHGTVKHSGFSIDLESLILFVTGLKDVRDAIPF 606


>gi|115488318|ref|NP_001066646.1| Os12g0414500 [Oryza sativa Japonica Group]
 gi|77555098|gb|ABA97894.1| tRNA synthetases class II family protein, expressed [Oryza sativa
           Japonica Group]
 gi|113649153|dbj|BAF29665.1| Os12g0414500 [Oryza sativa Japonica Group]
 gi|125579118|gb|EAZ20264.1| hypothetical protein OsJ_35868 [Oryza sativa Japonica Group]
          Length = 615

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/279 (11%), Positives = 77/279 (27%), Gaps = 24/279 (8%)

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQG---CLHQPEFTMLEWYRAHES 128
             +P YL        +    A    ++ F+  ++   +         E   ++   A   
Sbjct: 347 FHRPAYLTPCHTLHLETYACA-LSSVYTFSPVFQAESESLDSDRSLAERWTVDVELAFAE 405

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            E  +    + ++      ++                   +     A  + I+   +   
Sbjct: 406 LEDAISCAEDCVKSLCSTVSKDCSDELKFLS---------SNQAGDATSSVIEAAVSSPW 456

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                   +    Q                SR+ +  +  +L      I+  YP      
Sbjct: 457 QKIKYTEAVNTLLQVTDKTFESKLELGMPLSRVHLSYLADDLYKKPV-IIYDYPKQLKPF 515

Query: 249 ANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
                 D +    F+L    +  +     +         R E+   + +++        E
Sbjct: 516 YARLKEDLKTVSAFDLVVPKVGIVACGAQKEERMDNLTSRIEESGLQVEQL--------E 567

Query: 308 DFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            +L        + SG ++  + L++ VTG  ++ + I  
Sbjct: 568 WYLDTRRHGTVKHSGFSIDLESLILFVTGLKDVRDAIPF 606


>gi|289806182|ref|ZP_06536811.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. AG3]
          Length = 74

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 11/66 (16%)

Query: 3  QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMSLQ-Y 51
           + +      +   + R            L  R  I S +R +  ++ F++I++  L   
Sbjct: 3  PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 62

Query: 52 SPGNET 57
          +P    
Sbjct: 63 TPEGAR 68


>gi|240949264|ref|ZP_04753608.1| asparaginyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240296380|gb|EER47024.1| asparaginyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 57

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 304 PIDEDFLACL--TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           P D  +   L   +  Q SG  +GF+RL++ VTG  NI EVI  P 
Sbjct: 5   PEDYWWYRDLRRYDTVQHSGFGLGFERLIVYVTGLQNIREVIPFPR 50


>gi|119629073|gb|EAX08668.1| hCG1644029 [Homo sapiens]
          Length = 262

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 13/67 (19%)

Query: 1   MHQIPSQPWWNRDFHYRR-------------RPFLLKRNMIQSSLREYFVENQFIEIDSM 47
           MH +P      +D   R              R   +  + I + +R +  E  F++I++ 
Sbjct: 181 MHMLPHLHCGLKDQETRYHQKYLDLILNDFVRQKFIICSKIITCIRSFLDELGFLKIETP 240

Query: 48  SLQYSPG 54
            +   PG
Sbjct: 241 MVNIIPG 247


>gi|301090301|ref|XP_002895371.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262099042|gb|EEY57094.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 181

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 7/100 (7%)

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
                  P D R++   ++     E+ +    +  P  Q  R +     ++ +      I
Sbjct: 80  PFYTMPDPTDKRWSHSNDMMIRGEEMVSGAQRVHIPKLQMERMDILGVLQESM---RNYI 136

Query: 306 DEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
               L  L       G  +G +R+VML  G  NI++    
Sbjct: 137 YSFRLGAL----PHGGGGIGLERVVMLYLGLGNISKSSMF 172


>gi|73427047|gb|AAZ76103.1| putative pyruvate oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium]
          Length = 130

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 23/139 (16%)

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQL 132
              LYL TSPE+  K+LLAAG   +F    ++RN E G  H PEFTMLEWYR H    +L
Sbjct: 10  GINLYLMTSPEYHMKRLLAAGCGPVFQLCRSFRNEEMGRHHNPEFTMLEWYRPHYDMYRL 69

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
           M +  ++++   +                    E ++  +AF R+  ID       P   
Sbjct: 70  MNEVDDLLQQVLDC----------------QPAESLSYQQAFQRHLEID-------PLSA 106

Query: 193 DRHLLYLQAQQAGIRVAHD 211
           D+  L   A +  +    D
Sbjct: 107 DKTQLREAAAKLDLSNIAD 125


>gi|228933514|ref|ZP_04096366.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826148|gb|EEM71929.1| Aspartyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 65

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 309 FLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +L       P   G  +G +R++  +   +N+ E    P  
Sbjct: 19  YLNTFRYGCPPHGGFGIGLERILYKLLELSNVREASAFPRD 59


>gi|301115242|ref|XP_002905350.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262110139|gb|EEY68191.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 231

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 25/149 (16%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
            + ++A    +    +     +                   ILD++P           P 
Sbjct: 82  EMTIKAHYHKVLTEKEKWLGRLI---------KEKYDTDFYILDKFPLAVRPFYTMPDPT 132

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           D R++  +++     E+      + DP     R ++    +   +  IY+         L
Sbjct: 133 DKRWSNSYDMMIRGKEMVLCAQHVHDPKLLMERMDELGVPQESMRNYIYSLR-------L 185

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNI 339
             L       G  +G +R+VML  G  NI
Sbjct: 186 DSL----PHGGGGIGLERVVMLYLGLGNI 210



 Score = 45.8 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 44/174 (25%), Gaps = 14/174 (8%)

Query: 44  IDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLL-AAGEEKIFCFAH 102
           I +  L    G  +      T      +  +   L  SP+         A  E++F    
Sbjct: 7   IHTPKLV---GGASG---SGTNYFTLKYFDQDATLAQSPQTYKHMACDVAILERVFEIGP 60

Query: 103 AWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNP 161
            +R        H  E   L+     +++   +                    +       
Sbjct: 61  GFRAETSNTHRHMCELVGLDLEMTIKAHYHKVLTEKEKWLGRLIKEKYDTDFYILDKFPL 120

Query: 162 FSEPEYITVAEAFARYAN-IDL-----GTTLDNPDQPDRHLLYLQAQQAGIRVA 209
              P Y        R++N  D+        L      D  LL  +  + G+   
Sbjct: 121 AVRPFYTMPDPTDKRWSNSYDMMIRGKEMVLCAQHVHDPKLLMERMDELGVPQE 174


>gi|316979807|gb|EFV62542.1| asparagine--tRNA ligase [Trichinella spiralis]
          Length = 392

 Score = 57.7 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 68/239 (28%), Gaps = 23/239 (9%)

Query: 96  KIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
           K++ F  A+R        H  EF MLE  +A  +  + +   +  +        + +   
Sbjct: 152 KVYTFNPAFRAESSLTRQHLAEFYMLEVEQAFCTSLEDLMKLVENLILNCI---KTVMHE 208

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
              +     +       +   R   +     +   +  +      +     ++       
Sbjct: 209 SVEDLKICQQYHQTVAFDDLCRIEKLSSFPRITFVEATEILQNSNKNFSKNLKH------ 262

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI-ELCN 273
                +     +  + G      +  YPA           D      F+L   +  ELC 
Sbjct: 263 ---LRKEDERFLVQHFGNLPL-FVTEYPAETKPFYMKRNQDNTCALCFDLLVPHSGELCG 318

Query: 274 ACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVML 332
                 +     HR E     K     ++    E  L      P   G  +GF+RL+ L
Sbjct: 319 GSLRECNLDILSHRME---LLKIA--EQSQWYSE--LRKF-GYPDLGGFGLGFERLLQL 369


>gi|167947571|ref|ZP_02534645.1| lysyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 81

 Score = 57.7 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 7/71 (9%), Positives = 24/71 (33%), Gaps = 3/71 (4%)

Query: 4  IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFS 63
          + +   W           L  R  + +++R++F +   +E+++         +  I + +
Sbjct: 5  MSATHEWRPFASL---AMLQARAELLAAIRDFFRQAGVLEVETPVCSRFAVTDLAIESLT 61

Query: 64 TELIIQDHIRK 74
          +          
Sbjct: 62 SRYTGPGRPGG 72


>gi|221112048|ref|XP_002167843.1| PREDICTED: similar to asparaginase like 1 [Hydra magnipapillata]
          Length = 1204

 Score = 57.7 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/354 (11%), Positives = 96/354 (27%), Gaps = 40/354 (11%)

Query: 4    IPSQPWWNRDFHYRR-------RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNE 56
            IP + W +   H                +N +  S   +F   ++  + +     +  + 
Sbjct: 861  IPPKSWQSPILHSETAITHEWYSAIFDIQNTLYHSTVNFFNNLKYYYVLTPITTQTISSP 920

Query: 57   THI----RAFSTELIIQDHIRKPLYLQTSPEFSCKKLL--AAGEEKIFCFAHAWRNGEQG 110
              +         ++  ++     +++  S +F  +  L         +  + ++R     
Sbjct: 921  MGLGSDSEPVQVKISGEN-----VFIADSMQFVLEYSLRLKKNLAGTYYISPSFRGETPD 975

Query: 111  CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI-T 169
              H  +F  +E        +  +      +    +   +K  S         S    I  
Sbjct: 976  STHLNQFYHVECEILG-DMDAAISIAEKYVINLTKKICKKHSSIIQRTAGSISHINTILV 1034

Query: 170  VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
              E   ++  I+L   +D     D H  Y         V     +    +R   + +   
Sbjct: 1035 TFEKEGKFPRIELDDAIDIM--KDFHDFYELV------VNGRPEFGRKLTRKGEQFLIQK 1086

Query: 230  LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
                       +               +      L      L     E  +   Q     
Sbjct: 1087 FKGPVWLTHMDHLGVPFYQGYSNAEKTKAKAADLLIGLGETLGLG--ERHETCIQAE--- 1141

Query: 290  KEMQEKKKIYNETYPIDEDFLACLTEMPQ--SSGIAMGFDRLVMLVTGANNINE 341
             E     +I  E Y     +L  +  +    +SG  MG +R +  +   +++ +
Sbjct: 1142 -EALAHHRIEKEDYN---WYLN-MRRIKPLLTSGWGMGTERFLCWILQNDDVRD 1190


>gi|254172931|ref|ZP_04879605.1| asparagine synthetase A [Thermococcus sp. AM4]
 gi|214033087|gb|EEB73915.1| asparagine synthetase A [Thermococcus sp. AM4]
          Length = 300

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 87/306 (28%), Gaps = 69/306 (22%)

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR--- 105
           L   P  E  +R    E+       + L L  S     +  +A G +K+F  +   R   
Sbjct: 49  LWPDPAAEEALRPPEVEV-----YGERLRLTHSMILHKQMAVAMGIDKLFVLSPNIRLEG 103

Query: 106 NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSE 164
                  H  EFT L+   AH S + +M     +I          ++         P   
Sbjct: 104 KEADDGRHAYEFTQLDMEIAHASMDDVMGLIEELIVGLFRELRPVVWESFERELPKPKRP 163

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
            +  T+ E    + + +                                           
Sbjct: 164 FKRFTIEEIREEFGSEE------------------------------------------- 180

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
             E +  +     +   P                 + ++LY     L     E+    E+
Sbjct: 181 --EASRALEEPFWITGIPRE-----FYDREVDGTWRNYDLY-----LPEGYGEVSSGGER 228

Query: 285 RHRFEK-EMQEKKKIYNETYPIDEDFLA-CLTEM-PQSSGIAMGFDRLVMLVTGANNINE 341
              +EK   + +    +E       +L      +   S+G  +G +RL+  + GA +I E
Sbjct: 229 EWEYEKILAKIRSAGLSEEAFRP--YLEVAKAGLLRPSAGAGIGIERLIRYIVGAEHIAE 286

Query: 342 VIWTPF 347
           V   P 
Sbjct: 287 VQPFPR 292


>gi|301123771|ref|XP_002909612.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262100374|gb|EEY58426.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 217

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 46/149 (30%), Gaps = 25/149 (16%)

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA-NIYPA 254
            + ++A    +    +     +                   ILD++P           P 
Sbjct: 74  EMTIKAHYHKVLTEKEKWLGRLI---------KEKYDTDFYILDKFPLAVRPFYTMPDPT 124

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK----EMQEKKKIYNETYPIDEDFL 310
           D R++  +++     E+      + DP     R ++    +   +         I    L
Sbjct: 125 DKRWSNSYDMMIRGEEMVLCAQHVHDPKLLMERMDELGVPQESMRN-------YIYSLHL 177

Query: 311 ACLTEMPQSSGIAMGFDRLVMLVTGANNI 339
             L       G  +G +R+VML  G  NI
Sbjct: 178 DSL----PHGGGGIGLERVVMLYLGLGNI 202



 Score = 39.6 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 42/169 (24%), Gaps = 11/169 (6%)

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLL-AAGEEKIFCFAHAWRNG 107
           +    G  +      T      H  +   L  SP+         A  E++F     +R  
Sbjct: 1   MAALVGGASG---SGTNYFTLKHFDQDATLAQSPQTYKHMACDVASLERVFEIGPGFRAE 57

Query: 108 EQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                 H  E   L+     +++   +                    +          P 
Sbjct: 58  TSNTHRHMCELVGLDLEMTIKAHYHKVLTEKEKWLGRLIKEKYDTDFYILDKFPLAVRPF 117

Query: 167 YITVAEAFARYAN-IDL-----GTTLDNPDQPDRHLLYLQAQQAGIRVA 209
           Y        R++N  D+        L      D  LL  +  + G+   
Sbjct: 118 YTMPDPTDKRWSNSYDMMIRGEEMVLCAQHVHDPKLLMERMDELGVPQE 166


>gi|301111548|ref|XP_002904853.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262095183|gb|EEY53235.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 215

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/153 (11%), Positives = 45/153 (29%), Gaps = 27/153 (17%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
             +  +    R + ++  F+E  +  L                          + L  SP
Sbjct: 82  RIQAAVGQLFRAFLIQRDFVETHTPKL-------------------------DVILAQSP 116

Query: 83  EFSCKK-LLAAGEEKIFCFAHAWRNGEQG-CLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
           +   +    AAG E++F     +         H  EF  L+     + +   + +  + +
Sbjct: 117 QKYKQMACAAAGLERVFEIGPVFCAENSSTHRHMCEFVGLDLEMTIKEHYHEVLEVFSDL 176

Query: 141 RCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA 173
                   ++ ++ +    N     E +   + 
Sbjct: 177 YIYIFDGLKERYANELATINNQYPFEPLKYIKP 209


>gi|221057065|ref|XP_002259670.1| asparagine--tRNA ligase [Plasmodium knowlesi strain H]
 gi|193809742|emb|CAQ40444.1| asparagine--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 978

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 37/184 (20%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL----------QYS 52
           Q PS    +   H         +N I   LR+    + + E+ +  +            S
Sbjct: 411 QHPSLHHRHPVNHI----IFQMKNRIAQQLRQMLRRDGYTEVFTSKMIDLGRGGALGSAS 466

Query: 53  PGN-------ETHIRAFSTELIIQDHI---------------RKPLYLQTSPEFSCKKLL 90
            G        ++  R  S  +                      + + L  SP+F  + L+
Sbjct: 467 TGGEYTTDDADSASRTISDSMDRCGSFQLNGSEGGSGCYKIEGEEVILAQSPQFYKQMLI 526

Query: 91  AAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQ 149
            +  E+IF   +++RN +     H  EF  L+  +        +   M  +        Q
Sbjct: 527 NSDFERIFEMNYSYRNEKFNTSRHLNEFLSLDIEKVIYHNYYEIIIPMYNMLNRINKYIQ 586

Query: 150 KIFS 153
           + F 
Sbjct: 587 ETFE 590


>gi|289811373|ref|ZP_06542002.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 142

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 52/150 (34%), Gaps = 18/150 (12%)

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
           ++            + +      SP+   + L+ +G ++ +     +R+ +     QPEF
Sbjct: 1   YLVPSRVHKGKFYALPQ------SPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEF 54

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T ++   +  +  Q+ +    ++R                      +   +T AEA  RY
Sbjct: 55  TQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLG----------DFPVMTFAEAERRY 104

Query: 178 AN--IDLGTTLDNPDQPDRHLLYLQAQQAG 205
            +   DL   ++  D  D       A  AG
Sbjct: 105 GSDKPDLRNPMELVDVADLLKSVEFAVFAG 134


>gi|229895866|ref|ZP_04511036.1| Asparaginyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229700789|gb|EEO88818.1| Asparaginyl-tRNA synthetase [Yersinia pestis Pestoides A]
          Length = 246

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 32/103 (31%), Gaps = 29/103 (28%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS---------------- 52
            H R R  L       R+ +  ++  +F EN +  + +  +  S                
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQAIHRFFDENGYFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 53  ---PGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAA 92
              P  +T    F      +D   K  +L  S + + +    A
Sbjct: 185 ENLPRTDTGAVDF-----SEDFFGKEAFLTVSGQLNGETYACA 222


>gi|289807098|ref|ZP_06537727.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 49

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 291 EMQEKKKIYNETYPIDEDFLACL-TEMPQSSGIAMGFDRLVMLVTGA 336
           E ++++K            L  L    P   G+A G DRL ML+TG 
Sbjct: 11  EQEQREKFG--------FLLDALKYGTPPHVGLAFGLDRLTMLLTGT 49


>gi|147853688|emb|CAN81724.1| hypothetical protein VITISV_034603 [Vitis vinifera]
          Length = 560

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 48/195 (24%), Gaps = 11/195 (5%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   +  +L  S +   +    A    ++ F   +R        H  EF M+E   A   
Sbjct: 293 DFFARQAFLTVSGQLQVETXACA-IGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFAD 351

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            +  M      ++   +                  E       +    +  +      + 
Sbjct: 352 LKDDMNCAEAYVKFLCQWLPDNCIDD--------MEFMAKNFDKGSIDHLRMVASMPFER 403

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
               +   L  +A +   +  +   W    +          +      I+  YP    A 
Sbjct: 404 ISYAEAIKLLEEAVKKDKKFENKVEWGIDLASEHERFSTE-VLFKKLVIVHDYPKGIKAF 462

Query: 249 ANIYPADPRFTKRFE 263
                 D +     +
Sbjct: 463 YMRLNDDMKTVAADK 477



 Score = 47.7 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 85/301 (28%), Gaps = 33/301 (10%)

Query: 14  FHYRRRPFLL---KR--NMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H+R R  ++    R  N +  +   +F  + F+   +  +  S       +   +T + 
Sbjct: 163 VHFRSRANMIPAVARICNALAYATHTFFXNHGFLHAHTPIITTSDCEGAGEMFQVTTLIS 222

Query: 68  IQDHIRKPLYLQTSP-----EFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
             + ++K L    SP     E +    +      ++      R          E + L+ 
Sbjct: 223 DAEKVKKELIKNPSPSEADIEAAKALXVXGKSPHLWLNLTRLR--RISSR-LEERSKLKP 279

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP------EYITVAEAFAR 176
               +  +          +    V+ Q                      E+   +   A 
Sbjct: 280 GIPQKDGKIDYSQDFFARQAFLTVSGQLQVETXACAIGSVYTFGPTFRAEHSHTSRHLAE 339

Query: 177 YANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +  ++    +   D  D         +   +   D+   D+     + K      I+   
Sbjct: 340 FWMVE--PEIAFADLKDDMNCAEAYVKFLCQWLPDNCIDDM---EFMAKNFDKGSIDHLR 394

Query: 237 ILDRYPAP-ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK 295
           ++   P    S    I   +       E    + +  N  +  +D   +  RF  E+  K
Sbjct: 395 MVASMPFERISYAEAIKLLE-------EAVKKDKKFENKVEWGIDLASEHERFSTEVLFK 447

Query: 296 K 296
           K
Sbjct: 448 K 448


>gi|212531311|ref|XP_002145812.1| L-asparaginase, putative [Penicillium marneffei ATCC 18224]
 gi|210071176|gb|EEA25265.1| L-asparaginase, putative [Penicillium marneffei ATCC 18224]
          Length = 969

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/283 (12%), Positives = 92/283 (32%), Gaps = 13/283 (4%)

Query: 72  IRKPLYLQTSPEFSCKKL--LAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
           + +  YL  S +F+ +    +      ++  + ++R  +    H  +F  +E        
Sbjct: 689 LGQSTYLADSMQFALEYFLRIRDTVPGVYYISTSFRGEDHDARHVNQFHHVECELRGSFA 748

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           + +      I+   A +        Q    +     +++T    +A+           + 
Sbjct: 749 QGIKIAEGYILNLVATLLRDHAALIQASTADGSGRLDHLTSLHDYAKSHGGRFPQIALDD 808

Query: 190 DQPDRHLLYLQAQQAGIRVAH-DDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
                 +   +A+     V+  D +     + +   ++  + G     + +         
Sbjct: 809 ALSLPTMQNTKAEIIWRPVSDSDSSKGRTLTPLGERRLLEHFGGGPVWVTEMDHLSVPFY 868

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRF-EKEMQEKKKIYNETYPIDE 307
                +  R  +  +L   + E+    +  +   E RH     ++ +K K         +
Sbjct: 869 QAYTDSARRKARCADLLLGSGEVLGLGERHVSADEVRHALNLHQVADKGKY--------K 920

Query: 308 DFLACLTEMP-QSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
            +       P Q+ G  MG +R +  V   ++I +++  P  +
Sbjct: 921 WYTDVRESKPLQTVGWGMGIERFLAWVFRHDDIRDLLIVPRLK 963


>gi|240104072|ref|YP_002960381.1| asparagine synthetase A [Thermococcus gammatolerans EJ3]
 gi|239911626|gb|ACS34517.1| Asparaginyl-tRNA synthetase related protein (asnS) [Thermococcus
           gammatolerans EJ3]
          Length = 300

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 87/305 (28%), Gaps = 67/305 (21%)

Query: 49  LQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
           L   P +E  +R    E+       + L L  S     +  +A G +K+F  +   R   
Sbjct: 49  LWPEPSSEEALRPPEVEV-----YGEKLRLMHSMILHKQMAVAMGIDKLFVLSPNVRLES 103

Query: 109 Q---GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
           +      H  EFT L++  A  S + +M     +I          ++            P
Sbjct: 104 RLADDGRHAYEFTQLDFEIARASMDDVMGLIEELIVGLFRELRPFVWESFERELPKPRRP 163

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
                   F R+   ++     + ++  R +                             
Sbjct: 164 --------FKRFTLEEILEEFGSEEEASREMG---------------------------- 187

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            EP                   +   Y                + L     E+    E+ 
Sbjct: 188 -EPFWITGIPREFYD--REVDGIWRNYD---------------LYLPEGYGEVSSGGERE 229

Query: 286 HRFEK-EMQEKKKIYNETYPIDEDFLA-CLTEM-PQSSGIAMGFDRLVMLVTGANNINEV 342
             +EK   + +    +E       +L      +   S+G  +G +RL+  + GA +I EV
Sbjct: 230 WEYEKILAKIRSAGLSEEAFRP--YLEVAKAGLLRPSAGAGIGVERLIRYIVGAKHIAEV 287

Query: 343 IWTPF 347
              P 
Sbjct: 288 QPFPR 292


>gi|301096918|ref|XP_002897555.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262107015|gb|EEY65067.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 388

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 61/224 (27%), Gaps = 33/224 (14%)

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
           +   +  +       +        +    +     P    E             +DL   
Sbjct: 191 YFDQDANLAQSPQTYKHMECDVASRE---RVFEIVPGFRAETSNTHRHMCELVGLDL--- 244

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
                      + ++A    +    +     +                   ILD++P   
Sbjct: 245 ----------EMTIKAHYHKVLTEKEKWLGRLI---------KEKYDTNFYILDKFPLAV 285

Query: 246 SALA-NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                   P D R++  +++     E+      + DP     R ++    ++ I N  Y 
Sbjct: 286 RPFYTMPDPTDKRWSNSYDMMIRGEEMVLCAQHVHDPKLLMERMDELGAPQESIRNYIYY 345

Query: 305 IDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           +    L  L       G  +G +R+VML     NI +    P  
Sbjct: 346 LR---LDSL----PHGGGGIGLERVVMLYFCLGNICKSSMFPRD 382



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 37/142 (26%), Gaps = 8/142 (5%)

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLL-AAGEEKIF 98
            ++EI +  L       +    F+       +  +   L  SP+         A  E++F
Sbjct: 166 DYVEIHTPKLVGGASG-SGANYFT-----LKYFDQDANLAQSPQTYKHMECDVASRERVF 219

Query: 99  CFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
                +R        H  E   L+     +++   +                    +   
Sbjct: 220 EIVPGFRAETSNTHRHMCELVGLDLEMTIKAHYHKVLTEKEKWLGRLIKEKYDTNFYILD 279

Query: 158 NCNPFSEPEYITVAEAFARYAN 179
                  P Y        R++N
Sbjct: 280 KFPLAVRPFYTMPDPTDKRWSN 301


>gi|325510971|gb|ADZ22607.1| aspartyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 65

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 309 FLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
           +L      MP   G+A+G +R+ + +   +NI E  + 
Sbjct: 19  YLDVFKFGMPPHGGLAIGLERITIKLLNLDNIREAAFF 56


>gi|225454926|ref|XP_002277014.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 490

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 48/195 (24%), Gaps = 11/195 (5%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   +  +L  S +   +    A    ++ F   +R        H  EF M+E   A   
Sbjct: 256 DFFARQAFLTVSGQLQVETHACA-IGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFAD 314

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            +  M      ++   +                  E       +    +  +      + 
Sbjct: 315 LKDDMNCAEAYVKFLCQWLPDNCIDD--------MEFMAKNFDKGSIDHLRMVASMPFER 366

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
               +   L  +A +   +  +   W    +          +      I+  YP    A 
Sbjct: 367 ISYAEAIKLLEEAVKKDKKFENKVEWGIDLASEHERFSAE-VLFKKLVIVHDYPRGIKAF 425

Query: 249 ANIYPADPRFTKRFE 263
                 D +     +
Sbjct: 426 YMRLNDDMKTVAADK 440



 Score = 43.5 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 14  FHYRRRPFLL---KR--NMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTELI 67
            H+R R  ++    R  N +  +   +F+ + F+   +  +  S       +   +T + 
Sbjct: 111 VHFRSRTNMIPAVARICNALAYATHTFFLNHGFLHAHTPIITTSDCEGAGEMFQVTTLIS 170

Query: 68  IQDHIRKPLYLQTSP 82
             + ++K L    SP
Sbjct: 171 DAEKVKKELIKNPSP 185


>gi|238581429|ref|XP_002389606.1| hypothetical protein MPER_11243 [Moniliophthora perniciosa FA553]
 gi|215452056|gb|EEB90536.1| hypothetical protein MPER_11243 [Moniliophthora perniciosa FA553]
          Length = 358

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 45/130 (34%), Gaps = 28/130 (21%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS--PGNETHIRAFSTELIIQDHIRKPLYL 78
               R  + ++ R+ F +   +E+ +  L  +   G  T        L   ++  +P   
Sbjct: 249 VFRLRAALLAAFRQAFAKLNCLEVTTPCLVQTMVEGGAT--------LFELNYYGQPA-- 298

Query: 79  QTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
                             ++CF  ++R        H  E+T  E      +++QLM    
Sbjct: 299 ---------------LGDVYCFQESFRAENSHTRRHLAEYTHTEAEVGFITFDQLMDHIE 343

Query: 138 NIIRCAAEVA 147
           ++I  A ++ 
Sbjct: 344 SVICEAVDIL 353


>gi|271965735|ref|YP_003339931.1| asparaginase like protein 1-like protein [Streptosporangium roseum
           DSM 43021]
 gi|270508910|gb|ACZ87188.1| asparaginase like protein 1-like protein [Streptosporangium roseum
           DSM 43021]
          Length = 343

 Score = 55.4 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 77/281 (27%), Gaps = 29/281 (10%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
           D      YL  S +F  +          +    ++R  +    H  +F   E        
Sbjct: 83  DMFGVKTYLADSMQFMLEYGCRLNGAGAWYIMPSFRGEDADPTHLNQFFHSEAEIPGG-L 141

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
             +M      +R     A  +  S            + +  A+ + R    +  + LD+ 
Sbjct: 142 TDVMTLVDAYVRHLTGAAVNEFGSRIAEVAGGLGHVDAVIGADRYPRITFDEAVSLLDDQ 201

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
            +  RH       + G R        ++   +       +           Y    +  A
Sbjct: 202 PRFVRH-------EDGWRTLTRAGEQELLRTVHPVLWVSHYDHLSVPFYQAYAGDSTRTA 254

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDF 309
                     +   +  C     N               E+ ++  +         D  +
Sbjct: 255 LNADLLFGIGE---VVGCGERHMNG--------------EEALRALEHHEVSPASYDW-Y 296

Query: 310 LACLTEMPQ--SSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
           L  +       ++G  +G +R +M +  +++I E+   P  
Sbjct: 297 LR-MKRARPMRTAGFGLGIERWLMWLLRSDDIRELQLVPRL 336


>gi|70953346|ref|XP_745780.1| asparagine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56526209|emb|CAH77791.1| asparagine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 605

 Score = 55.4 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 82/300 (27%), Gaps = 49/300 (16%)

Query: 81  SPE----FSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLE-WYRAHESYEQLMKD 135
           SP+    F  K         I  F +   +         E         +          
Sbjct: 314 SPQSVYSFLNKVDKNEIYNDILQFYNNIYDETMSTSKAEENKNCNKPTPSFFPNHTQFDK 373

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
             ++  C    AN +       N    +          ++ ++ I      +   +    
Sbjct: 374 TCDMKTCQCMAANNENLFDLEKNSFNDNP-------HGYSHFSGISKYLEKNKNIKISVK 426

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP-A 254
                 +   + +   D  +D  + + +             I+D+YP       ++    
Sbjct: 427 EKNEIKKLKELYIYEKDFTNDELNYLYLFI--KYNFNTDIFIIDQYPLHLRPFYSLSNLY 484

Query: 255 DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID-------- 306
           D RFT  F+      E+ +    + +      R  KE     K  +E   ID        
Sbjct: 485 DLRFTNSFDFIYKGTEIISGSQRINNLPLLLLRILKESINDNK--DEGNRIDVSSYLQIN 542

Query: 307 ------EDFLACLTEMP------------------QSSGIAMGFDRLVMLVTGANNINEV 342
                  ++L  L ++                     +G+A+G DR  ML+    NI + 
Sbjct: 543 KTNFNLSNYLDDLQKLINKNSTLYKYINSFTYSSKPHAGMALGLDRFFMLLFNLTNIKKT 602



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/347 (13%), Positives = 93/347 (26%), Gaps = 87/347 (25%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKP----- 75
               +N+I   +R    E+++IE+ +  L        +    ST++   +   K      
Sbjct: 13  IFNLKNLIIKKMRYMLGEDKYIEVFTPKLVRIDKPPKNKNNLSTQVDNVNLFEKKEINKT 72

Query: 76  -------------------------------LYLQTSPEFSCKKLLAAGEEKIFCFAHAW 104
                                          + L  SP+F  + ++    EKIF   +++
Sbjct: 73  KDNDNNTSMEKYTELNGSEGGSNCFKIENENIILAQSPQFYKQMIINYDYEKIFEINYSY 132

Query: 105 RNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNII---------RCAAEVANQKIFSF 154
           RN +     H  EF  L+  +   +    +   +                +  N    S+
Sbjct: 133 RNEKFHSTKHLNEFLSLDIEQVIYNNYYEVIIYIYNFLKNIINYINTNFNQEINLINLSY 192

Query: 155 QNVNCNPFSEPEYITV----------AEAFARYANIDLGTTLDNPDQ------------- 191
              N +   EP  +T            +   +Y  +  GT   +  +             
Sbjct: 193 GKKNAHTKYEPTMVTTTPVVLSFCEAHDILKKYYYVKNGTPFCSCKKSIQDGYIHDDQYN 252

Query: 192 ---PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY------- 241
                 +       +  I     D    + +     KI  N  I+     + Y       
Sbjct: 253 MRVKILNENEKNKLKKNIIFEDGDQNGQLHNVYYNNKIANNYKIDINNCENNYADNTNQD 312

Query: 242 --PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRH 286
             P    +  N    +  +    + Y       N  DE +   +   
Sbjct: 313 LSPQSVYSFLNKVDKNEIYNDILQFY------NNIYDETMSTSKAEE 353


>gi|300853862|ref|YP_003778846.1| asparaginyl-tRNA synthetase-like protein [Clostridium ljungdahlii
           DSM 13528]
 gi|300433977|gb|ADK13744.1| asparaginyl-tRNA synthetase related protein [Clostridium
           ljungdahlii DSM 13528]
          Length = 322

 Score = 55.0 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 104/358 (29%), Gaps = 78/358 (21%)

Query: 14  FHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
              +    L  +  I  ++ +Y  +N  + +    L        H    S E     +  
Sbjct: 23  RREKLPTILGIQQAILRAVDDYMYKNGVVRLLPNMLAPITDPLCH----SVEECAITYQG 78

Query: 74  KPLYLQTSPEFSCKKLLAA-GEEKIFCFAHAWR---NGEQGCLHQPEFTMLEWYRAHESY 129
           +   L  S  F  +  L++   +KI+  +   R          H  EFT +++     + 
Sbjct: 79  QEFNLTKSMIFHKQIALSSPNLQKIYIVSPNVRLELPERGDKRHLFEFTQVDFEFKDGTM 138

Query: 130 EQLMKDCMNIIRCAAEVANQKI------FSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
             + +    +++   +   ++             + N     E  T  E  A+Y      
Sbjct: 139 NTVFEFMEGLVKYVFDYIKEECKDKFEKLGIGTSHLNITGPFERHTTQELKAKY------ 192

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                                           D F  I  +K            L  +  
Sbjct: 193 -------------------------------GDDFEAIASQKA------TQPFWLINHKR 215

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKKIYNET 302
                 +    D R T R       +       E L   E+ +++++ + + ++      
Sbjct: 216 E---FYDAEDLDNRGTYRNYDLIWPM----GYVEGLSGGEREYKYDRIITRMREA----- 263

Query: 303 YPIDEDFLA-----CLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
             +DE  L           +P+++G   G +R+   V     I++V      +  +E+
Sbjct: 264 -KMDESLLRNYIELAKRGELPKTAGAGFGVERMTRFVCQQKEIDDVTVFSR-KPGKEK 319


>gi|332158426|ref|YP_004423705.1| asparagine synthetase A [Pyrococcus sp. NA2]
 gi|331033889|gb|AEC51701.1| asparagine synthetase A [Pyrococcus sp. NA2]
          Length = 294

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/339 (14%), Positives = 85/339 (25%), Gaps = 78/339 (23%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYS-------PGNETHIRAFSTELIIQDHIRK 74
           +  +      + ++FVE  F  +  + L          P  E  ++    E+        
Sbjct: 15  IELQTKTLDYMTKFFVERGFKWLLPVMLSPITDPLWPDPAGE-GVKPLEVEV-----YGT 68

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC---LHQPEFTMLEWYRAHESYEQ 131
            + L  S     +  +A G +KIF  +   R   +      H  EFT L++     S + 
Sbjct: 69  RMRLTHSMILHKQLAIAMGLKKIFVLSPNIRIESRDRDDGKHAYEFTQLDFEIEGASMKD 128

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQ 191
           +MK    +I      A                             +   +          
Sbjct: 129 VMKLIEELIYGLFRKA---------------------------EEWTGREFPKARHFKVY 161

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
             + +L                      +   E  EP   +N                  
Sbjct: 162 EYQDILDEFGSD---------------EKASEEMDEPFWIVNIPREFYD--REVDGYWRN 204

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
           Y            Y           E       R       + +    NE       +L 
Sbjct: 205 YD-------LILPYGYGEVSSGGEREWEYEKILR-------KIRASGLNEESFRP--YLE 248

Query: 312 -CLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
                 +  S+G  +G +RLV  + G  +I EV   P  
Sbjct: 249 IAKAGKLKPSAGAGIGVERLVRFIVGVKHIAEVQPFPRV 287


>gi|297789439|ref|XP_002862686.1| hypothetical protein ARALYDRAFT_497343 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308355|gb|EFH38944.1| hypothetical protein ARALYDRAFT_497343 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 446

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 10/84 (11%)

Query: 3   QIPSQPWW---NRDF-HYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +P         RD  H R R  L       RN +  +   +F E+ F+ I +  +  S 
Sbjct: 117 PLPKTKLTPEFLRDLLHLRSRTNLISAVARIRNALAFATHSFFQEHGFLYIHTPIITTSD 176

Query: 53  PGNETHIRAFSTELIIQDHIRKPL 76
                 +   +T +   + + + L
Sbjct: 177 CEGAGEMFQVTTLINHTERVEQDL 200



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/161 (9%), Positives = 33/161 (20%), Gaps = 8/161 (4%)

Query: 96  KIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
            ++ F   +R        H  EF M+E   A       M      ++       +     
Sbjct: 292 NVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADIHDDMNCAEAYVKYMCNWLIKNCSDD 351

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
            +                   R   +   +           +L     +  +   +    
Sbjct: 352 MDFMDKNV-------DGGCTKRLKMVAETSFKRVTYTEAIEVLEKAVAEGKVVFDNKVER 404

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
               +      +          I+  YP    A       D
Sbjct: 405 KMDLASEHERYLTEVEYDQKPIIVYNYPKEIKAFYMRLNDD 445


>gi|9294240|dbj|BAB02142.1| unnamed protein product [Arabidopsis thaliana]
          Length = 61

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 28/64 (43%), Gaps = 4/64 (6%)

Query: 48  SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNG 107
            +    G     R F+T     + ++  ++++ +PE   K+L+  G ++++     +RN 
Sbjct: 1   MMNMIAGGAVE-RPFAT---YHNDMKIKMFMRIAPELYLKELVVGGFDRVYEIGKQFRNE 56

Query: 108 EQGC 111
               
Sbjct: 57  GIDM 60


>gi|255562234|ref|XP_002522125.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
 gi|223538724|gb|EEF40325.1| aspartyl-tRNA synthetase, putative [Ricinus communis]
          Length = 328

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 10/123 (8%)

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCM 137
           L   P+   + L+ +G +K + FA  +R+ +     QPEFT L+   A    E ++K   
Sbjct: 214 LPQIPQLFKQMLMVSGFDKYYQFARCFRDEDLRADRQPEFTQLDMELALTPLEDMLKLNE 273

Query: 138 NIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLL 197
           ++IR                     +    +  AEA +RY   D   T  + +  D   +
Sbjct: 274 DVIRKVFLKIKGVQLP---------NPFPRLAYAEAMSRY-GSDRSDTRFDLELKDLEGM 323

Query: 198 YLQ 200
            ++
Sbjct: 324 RIK 326


>gi|116203613|ref|XP_001227617.1| hypothetical protein CHGG_09690 [Chaetomium globosum CBS 148.51]
 gi|88175818|gb|EAQ83286.1| hypothetical protein CHGG_09690 [Chaetomium globosum CBS 148.51]
          Length = 231

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 12/107 (11%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE----THIRAFSTELIIQDHIR 73
            L  R+   +SL ++F    F +     +  S      E    T                
Sbjct: 121 LLRLRSEAIASLTQFFAGRSFTQTHPPIITSSDCEGAGEVFTVTPANDTPVPADKDASED 180

Query: 74  KPL----YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPE 116
                  YL  S +    + LA     ++  +  +R  +   L  PE
Sbjct: 181 SFFRSKKYLTVSTQLHL-EALAQAVGNVWTLSPVFRAEKSDTLEAPE 226


>gi|149924359|ref|ZP_01912726.1| tRNA synthetase, class II (D, K and N) [Plesiocystis pacifica
           SIR-1]
 gi|149814747|gb|EDM74319.1| tRNA synthetase, class II (D, K and N) [Plesiocystis pacifica
           SIR-1]
          Length = 251

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 53/162 (32%), Gaps = 15/162 (9%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSC 86
               ++R         E+ +       G E  I  +   ++      +  YL TSPE + 
Sbjct: 22  AALEAVRTTLRGGGMREVSTPIR----GPEVAIEPWIEPIVA----GRGRYLATSPELAM 73

Query: 87  KKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV 146
           K LLA G   +F  AH +R  E G  H  EF ++EWYR+      +  D   +I      
Sbjct: 74  KGLLARGAPSMFQIAHVFRAAEIGAQHSEEFHLIEWYRSPGQLPDVQGDVEAVIEAVFAA 133

Query: 147 ANQKIFSFQNVNCNPFS-------EPEYITVAEAFARYANID 181
               +      +                +   +       I+
Sbjct: 134 VASVLAGDARWDALRQRAAASRPARWRRVKTLDLLGETLGIE 175


>gi|213852618|ref|ZP_03382150.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 164

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 20/56 (35%), Gaps = 10/56 (17%)

Query: 3   QIPSQPWWNRDFHYRRRPF----------LLKRNMIQSSLREYFVENQFIEIDSMS 48
            + +      +   + R            L  R  I S +R +  ++ F++I++  
Sbjct: 109 PLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPM 164


>gi|77744594|gb|ABB02261.1| asparaginyl-tRNA synthetase [Ovis aries]
          Length = 152

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 44/143 (30%), Gaps = 9/143 (6%)

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFT 259
            ++  ++      +          +      IN   +L R+P    S      P DPR T
Sbjct: 14  LKEHNVKKEDGTFYEFGEDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDPRLT 73

Query: 260 KRFE-LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
           +  + L     E+      + D  E    ++     ++ I    Y    D          
Sbjct: 74  ESVDVLMPNVGEIVGGSMRIWDNEEILAGYK-----REGIDPTPYYWYTD--QRKYGTCP 126

Query: 319 SSGIAMGFDRLVMLVTGANNINE 341
             G  +G +R +  +    +I +
Sbjct: 127 HGGYGLGLERFLTWILDRYHIRD 149


>gi|238595914|ref|XP_002393908.1| hypothetical protein MPER_06285 [Moniliophthora perniciosa FA553]
 gi|215462078|gb|EEB94838.1| hypothetical protein MPER_06285 [Moniliophthora perniciosa FA553]
          Length = 155

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/136 (11%), Positives = 44/136 (32%), Gaps = 1/136 (0%)

Query: 71  HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESY 129
           + +   +L  SP+ + +  +AA  E+++     +R  +     H  EF  L+   A E +
Sbjct: 1   YFKGNAFLAQSPQLAKQMCIAADFERVYEIGPVFRAEDSNTHRHLTEFMGLDLEMAIEEH 60

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              + + ++ +  +     ++ +  +          +     E       +     +D  
Sbjct: 61  YHEVMELLDGLFISIFRGLREKYKKEIQVIGKQFPADEFKWREGPEGTLKLKFREAIDLL 120

Query: 190 DQPDRHLLYLQAQQAG 205
               +        +  
Sbjct: 121 HGKRKEAWQNCKGKYD 136


>gi|18978323|ref|NP_579680.1| asparagine synthetase A [Pyrococcus furiosus DSM 3638]
 gi|42543102|pdb|1NNH|A Chain A, Hypothetical Protein From Pyrococcus Furiosus Pfu-1801964
 gi|18894151|gb|AAL82075.1| partial asparaginyl-tRNA synthetase matches COOH terminus
           [Pyrococcus furiosus DSM 3638]
          Length = 294

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 96/341 (28%), Gaps = 80/341 (23%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIE----IDSMS---LQYSPGNETHIRAFSTELIIQDHI 72
           P L  +  I   + ++FV+  F      I S     L   P  E  +     E+      
Sbjct: 13  PTLDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGE-GMEPAEVEI-----Y 66

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ---GCLHQPEFTMLEWYRAHESY 129
              + L  S     +  +A G +KIF  +   R   +      H  EFT L++       
Sbjct: 67  GVKMRLTHSMILHKQLAIAMGLKKIFVLSPNIRLESRQKDDGRHAYEFTQLDFEV----E 122

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
              M+D M +I        +K   +           E    +E    + + +  +     
Sbjct: 123 RAKMEDIMRLIERLVYGLFRKAEEWTGREFPKTKRFEVFEYSEVLEEFGSDEKASQEME- 181

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
                                                EP   IN                
Sbjct: 182 -------------------------------------EPFWIINIPREFYD--REVDGFW 202

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKKIYNETYPIDED 308
                       ++L            E+    E+   +EK + + +K   NE       
Sbjct: 203 R----------NYDLILPY-----GYGEVASGGEREWEYEKIVAKIRKAGLNEDSFRP-- 245

Query: 309 FLA-CLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +L       +  S+G  +G +RLV  + GA +I EV   P 
Sbjct: 246 YLEIAKAGKLKPSAGAGIGVERLVRFIVGAKHIAEVQPFPR 286


>gi|260822038|ref|XP_002606410.1| hypothetical protein BRAFLDRAFT_67661 [Branchiostoma floridae]
 gi|229291751|gb|EEN62420.1| hypothetical protein BRAFLDRAFT_67661 [Branchiostoma floridae]
          Length = 151

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 14/33 (42%)

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                 G  +G +R +  + G N+I +V   P 
Sbjct: 112 GTCPHGGYGLGLERFLCWMMGINHIRDVCLYPR 144


>gi|124506207|ref|XP_001351701.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23504629|emb|CAD51508.1| asparagine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 1128

 Score = 52.7 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQ 131
            + + L  SP+   + L+ +  +K++   + +RN +     H  EF  L+  +       
Sbjct: 609 GQNIVLSQSPQLFKQMLINSDFDKVYEINYCYRNEKFHSSRHLNEFMSLDIEKVIYDNYY 668

Query: 132 LMKDCMNII 140
            +   M  I
Sbjct: 669 EIIIYMYNI 677


>gi|213421219|ref|ZP_03354285.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 213

 Score = 52.7 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 27/89 (30%), Gaps = 19/89 (21%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDSMSLQYS-PGNETHIRAFSTE-- 65
            H R R  L       R+ +  +L  +F E  F  + +  +  S       +   ST   
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTLDL 184

Query: 66  -----------LIIQDHIRKPLYLQTSPE 83
                         +D   K  +L  S +
Sbjct: 185 ENLPRNDQGRVDFDKDFFGKESFLTVSGQ 213


>gi|313906016|ref|ZP_07839369.1| Histidine--tRNA ligase [Eubacterium cellulosolvens 6]
 gi|313469129|gb|EFR64478.1| Histidine--tRNA ligase [Eubacterium cellulosolvens 6]
          Length = 416

 Score = 52.7 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 97/355 (27%), Gaps = 51/355 (14%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNE------- 56
             +D   R       RN +   +RE +    F +I++        L    G E       
Sbjct: 10  GMKDILPREMEI---RNYVMQQIRETYANFGFTQIETPCVEHIENLNSKQGGENEKLIFK 66

Query: 57  --------THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
                       A +   +    +R  L L  S  ++          K       WR   
Sbjct: 67  IMKRGEKLRLAEAKTEADLTDSGLRYDLTLPLSRYYANNANELPSPFKALQMGSVWRADR 126

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                  +F   +     E+      + +            K F+ +  +         +
Sbjct: 127 PQRGRFRQFMQCDIDILGEASNIAEIELVLATTTVLGKVGFKNFTIRINDRRILKA---M 183

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI-- 226
                F   +  ++   LD  D+     +  +  +AG      D + ++F  I  +    
Sbjct: 184 AAYSGFPEESYDEVFIILDKMDKIGLDGVAAELTEAGFAQESVDKYLELFRLITPDVAGV 243

Query: 227 ----EPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
               E   G       D      +++     A+ +      L    +             
Sbjct: 244 QLAKEKLEGFLDPQYADDLMTIINSVEATKRAEFKMAFDPTLV-RGMSYYTG-------- 294

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDE---DFLACLTEMPQSSGIAMGFDRLVMLVT 334
                FE  M E           DE    F+    +   + G ++GF+R+VML+ 
Sbjct: 295 ---PIFEISMDEFGGSVGGGGRYDEMVGKFI---GQSVPAVGFSIGFERIVMLLL 343


>gi|171678111|ref|XP_001904005.1| hypothetical protein [Podospora anserina S mat+]
 gi|170937125|emb|CAP61782.1| unnamed protein product [Podospora anserina S mat+]
          Length = 456

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 77/300 (25%), Gaps = 36/300 (12%)

Query: 34  EYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
           EY   + F  + + +L            F+       +  +   L  + E      L+A 
Sbjct: 171 EYLKLHDFYHVPTPALVGYEFPGEEDDLFTVP-----YFGRTARLAPTGEIHLGMALSAD 225

Query: 94  EEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFS 153
            E+++ F   +R           FTMLE     +     + D  + +  +   + Q    
Sbjct: 226 LERVYDFHTVFRREP--------FTMLELVFNLQHSWIEILDFADSLLVSLLHSLQSQDK 277

Query: 154 FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA-QQAGIRVAHDD 212
           +  +              +     +        +      R  + +++        + + 
Sbjct: 278 YTTLTNTAKRLYPLAGTFKLGLGKSGKLPRIRFNEAKTILRDFIGIESDDDKDFTRSEEA 337

Query: 213 TWSDIFSRILIEKIEPNLGINCCTILDRYPAPE-SALANIYPADPRFTKRFELYACNIEL 271
                 +        P         +  +P    S            T+ F++     E 
Sbjct: 338 ALGRFLASEESHVSPPTDVF----FITHFPKHLRSCNIYPSDEQDDTTQSFDVILRGQEC 393

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED------FLACLT-EMPQSSGIAM 324
              C  L    +    F           N  +PID +      ++      MP   G   
Sbjct: 394 VTGCRLLHSAEDLAAAFA----------NRPHPIDPETPEWRPYMTAHEIGMPPWGGFGC 443


>gi|150402786|ref|YP_001330080.1| histidyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|166228582|sp|A6VHK3|SYH_METM7 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|150033816|gb|ABR65929.1| histidyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 418

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/348 (15%), Positives = 102/348 (29%), Gaps = 43/348 (12%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNE--TH 58
           +P   RDF       + KR +I+  LR+ F    F EI++ +      L    G+E  T 
Sbjct: 6   KPKGTRDFLP---EEMKKRKVIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQ 62

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +  F      +  +R  L    +  +  +        K++ F + +R          EF 
Sbjct: 63  LFVFKDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFW 122

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA----F 174
            +       +      + +N+     +  N                 E   +++      
Sbjct: 123 QMGSELIGSNKPIADAEVINMAIEGLKEINMDFEINIGHLGVLKGVFEKYDLSDDEGNEI 182

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R  + +    L +          ++  +    V       ++ S++  +  E    I  
Sbjct: 183 RRLIDKEDMDGLKSALNRIESEKNIEISEKVFEVLDLKGGREVISKLKEKLAEFESSIAA 242

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              LD           I     R       Y   +       E+    E         ++
Sbjct: 243 LENLDSILEFVPHEYIINFGIARGLD----YYTGMVF-----EIYGKREG-------ARQ 286

Query: 295 KKKIYNETYPIDEDFLACLTEMP-QSSGIAMGFDRLVMLVTGANNINE 341
                      D + +      P  + G A GFDR +ML     NI++
Sbjct: 287 VCGGGR----YD-NLIELFEGEPSPAVGFAYGFDR-IML-----NIDD 323


>gi|255514203|gb|EET90465.1| tRNA synthetase class II (D K and N) [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 305

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/342 (15%), Positives = 94/342 (27%), Gaps = 72/342 (21%)

Query: 22  LLKR----NMIQSSLREYFVENQFIEIDSMSLQYSP---GNETHIRAFSTELIIQDHIRK 74
           L  R    + I     +YF ++ F+++  + L  S    G +       T  I   +  +
Sbjct: 8   LKLRVTAESAIIRFAVDYFHDSGFVQLLPVVLGKSTDPLGPDPGSSIVKTPEIE--YGGE 65

Query: 75  PLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE----QGCLHQPEFTMLEWYRAHESYE 130
            LY   S     +  +    EKIF  +   R           H  EFT L++       +
Sbjct: 66  RLYTMNSMILHKQIAV-KDLEKIFILSPNIRLERPERGSTRRHLFEFTQLDFEIKDAKMD 124

Query: 131 QLMKDCMNIIRCAAEVAN------QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
            +++     +                               +  T  E  A+Y       
Sbjct: 125 DVIRVVEGFLGKLGAAIKADSRAAGVFSGLGVEPFEFRPPFKRYTTHELEAKYGQDWESK 184

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
              + DQP      L  ++       D       +  LI                 YP  
Sbjct: 185 ASMSHDQP---FWALCHKREFYEREDDSEPGHYLNYDLI-----------------YPK- 223

Query: 245 ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYP 304
                                           E L   E+ + + + M+   +   E   
Sbjct: 224 -----------------------------GYGEALSGGEREYEYGRIMKRMSRDKLELGI 254

Query: 305 IDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWT 345
            D  ++  L      S+G   G +RL   +T A+++ +V   
Sbjct: 255 YDA-YIEQLKKGFVPSAGAGFGIERLTRFMTAADHVGDVQVF 295


>gi|254478049|ref|ZP_05091433.1| tRNA synthetase class II (D, K and N) subfamily protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|214036053|gb|EEB76743.1| tRNA synthetase class II (D, K and N) subfamily protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 507

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 56/410 (13%), Positives = 109/410 (26%), Gaps = 92/410 (22%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSL---QYSPGNETHIRAFSTELIIQDHIRKPL 76
            F  K N ++ S+R++  + +FIE+ +  L       G +         +        P 
Sbjct: 99  EFFRKINSLEDSVRDFLKKEKFIELRNPILWVPVQEYGTKEW------RIQNPITKETPY 152

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWR----NGEQGCLHQPEFTMLEWYRAHESYEQL 132
            L  SP         AG E+ F F   +R    N         EFT L    A  + E+ 
Sbjct: 153 ILLQSPNILNLISTVAGIERNFQFHPCFRLAEENSLARNDSLIEFTQLAITAAFLTNEEA 212

Query: 133 MKDCMNIIRCAAEVANQKIFSFQN---------------VNCNPFSEPEYITVAEAFARY 177
           M+   ++     +                               F +    +      +Y
Sbjct: 213 MRLIEDMFFYIIKKHFDIEIEKPFEILDYHESMKLYSTDHPDLRFRKFYRPSFIINGYKY 272

Query: 178 ANI-----------DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSD-IFSRILIEK 225
             +           +           +    +   +   ++    D  +D +        
Sbjct: 273 TGLIIPAYVNKKIEEFLINKTYQQDRENSNFFSYDENKTLKQKLGDIKADYLIDEWFENN 332

Query: 226 IEPNLGIN-------------------------------CCTILDRYP------------ 242
               +G                                     +  YP            
Sbjct: 333 EIEKVGYILLLPSSIETDIFYNRISKTLYPKLFGKVEKYKFCWIKNYPFINELEYDSQSL 392

Query: 243 --APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYN 300
             A    +      +   T+  +L    IE+ +   ++    E     E  ++ K K  N
Sbjct: 393 HDAIGQNIFTKRIRNSNDTEGIDLVLNGIEIASGGQKVNTAEEFIESLE-LLKIKDKQKN 451

Query: 301 ETYPIDEDFLACLT-EMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
                D  F+  L    P    I +G++R ++ +     I++V+  P  Q
Sbjct: 452 ----YDY-FIKVLKTGAPPLFSIGIGWERTLLALFETKTISDVMVFPKDQ 496


>gi|147785807|emb|CAN62126.1| hypothetical protein VITISV_037579 [Vitis vinifera]
          Length = 545

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/177 (11%), Positives = 47/177 (26%), Gaps = 10/177 (5%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   +  +   S +   +    A    ++ F   +R        H  EF M+E   A   
Sbjct: 278 DFFARQAFFNVSGQLQVETYACA-IGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFAD 336

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            +  M      ++   +                  E       +    +  +      + 
Sbjct: 337 LKDDMNCAKAYVKFLCQWLPDNCIDD--------MEFMAKIFDKGSIDHLRMVASMPFER 388

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
               +   L  +A +   +  +   W    +    + +    G  C + + R P+  
Sbjct: 389 ISYAEAIKLLEEAVKKDKKFENKVEWGIDLASEHDQILASRQGHRCFSQMVRVPSSL 445


>gi|153953610|ref|YP_001394375.1| asparaginyl-tRNA synthetase-related protein [Clostridium kluyveri
           DSM 555]
 gi|219854232|ref|YP_002471354.1| hypothetical protein CKR_0889 [Clostridium kluyveri NBRC 12016]
 gi|146346491|gb|EDK33027.1| Asparaginyl-tRNA synthetase-related protein [Clostridium kluyveri
           DSM 555]
 gi|219567956|dbj|BAH05940.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 324

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/347 (12%), Positives = 99/347 (28%), Gaps = 70/347 (20%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
            L  +  I  S+ +Y  +N  + +    +        H    S E     +  +   +  
Sbjct: 32  ILKIQQAILRSVDDYMYKNGVVRLLPNMISPITDPLCH----SVEDCDFTYGGQKFNVTK 87

Query: 81  SPEFSCKKLL-AAGEEKIFCFAHAWR---NGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
           S  F  +  L     +KI+  +   R          H  EFT +++     + + +    
Sbjct: 88  SMIFHKQLALSNPYLQKIYIVSPNVRLELPERGDVRHLFEFTQVDFEFKDATMDTVFGFM 147

Query: 137 MNIIRCAAEVANQKIFSFQNV------NCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
             +I  A     ++             + +     E  T  E  A+Y             
Sbjct: 148 EGLIEQAFCYIKEECKEEFKKLGVGTSHLDVSGPFERHTTQELKAKYG------------ 195

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                   L +++A            + +         +L                    
Sbjct: 196 ---EDFEALASKEATRPFW-------LINHKREFYDAEDLENKGTYKNYD---------- 235

Query: 251 IYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEM-QEKKKIYNETYPIDEDF 309
                        L            E L   E+ + +++ + + ++   +E     +D+
Sbjct: 236 -------------LIWPM-----GYVEGLSGGEREYNYDRIITRMREAGMDEQSM--KDY 275

Query: 310 LA-CLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQSNQEE 354
           +       +P+++G   G +R+   V   ++I+EV      +  + +
Sbjct: 276 IELAKRGEIPKTAGAGFGVERMTRFVCQQDDIDEVTVFSR-KPGKGK 321


>gi|156372381|ref|XP_001629016.1| predicted protein [Nematostella vectensis]
 gi|156216007|gb|EDO36953.1| predicted protein [Nematostella vectensis]
          Length = 87

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 6/34 (17%), Positives = 13/34 (38%)

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                  G  +G +R +  +    +I +V + P 
Sbjct: 47  YGSCPHGGYGLGLERFLTWLLNRQHIRDVCFYPR 80


>gi|225434408|ref|XP_002277398.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 331

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 43/159 (27%), Gaps = 6/159 (3%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   +  +L  S +   +    A    ++ F   +R        H  EF M+E   A   
Sbjct: 87  DFFARQAFLTVSGQLLVETYACA-IGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFAD 145

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE----PEYITVAEAFARYANIDLGT 184
            +  M      ++   +                F +       +  +  F R +  +   
Sbjct: 146 LKDDMNCAEAYVKFLCQWLPDNCIDDMEFMAKNFDKGSIDHIRMVASMPFERISYAEAIK 205

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
            L+   + D+           +   HD   +     +  
Sbjct: 206 LLEEAVKKDKKFENKVEWGIDLASEHDQILASRLETLFD 244


>gi|301118242|ref|XP_002906849.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262108198|gb|EEY66250.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 284

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 39/144 (27%), Gaps = 14/144 (9%)

Query: 40  QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLL-AAGEEKIF 98
            ++EI +  L       +    F+       +  +   L  SP+         A  E++F
Sbjct: 89  DYVEIHTPKLVGGASG-SGANYFT-----LKYFDQDATLAQSPQTYKHMACDVASLERVF 142

Query: 99  CFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNV 157
                +R        H  E   L+          +      ++    +   + I    + 
Sbjct: 143 EIGPGFRAETSNTNRHMRELVGLDLELT------IKAHYHKVLTEKEKWLGRLIKEKYDT 196

Query: 158 NCNPFSEPEYITVAEAFARYANID 181
           +     +     V +       +D
Sbjct: 197 DFYILDKFPLAHVHDPKLLMERMD 220



 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 318 QSSGIAMGFDRLVMLVTGANNI 339
              G  +G +R+VML  G  NI
Sbjct: 242 PHGGGGIGLERVVMLYLGLGNI 263


>gi|134046820|ref|YP_001098305.1| histidyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|166228581|sp|A4G0V7|SYH_METM5 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|132664445|gb|ABO36091.1| histidyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 418

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 100/348 (28%), Gaps = 43/348 (12%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNE--TH 58
           +P   RDF       + KR +I+  LR+ F    F EI++ +      L    G+E  T 
Sbjct: 6   KPKGTRDFLP---EEMKKRKVIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQ 62

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFT 118
           +  F      +  +R  L    +  +  +        K++ F + +R          EF 
Sbjct: 63  LFVFKDHGNREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFW 122

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEA----F 174
            +              + +N+     +  N                 E   +++      
Sbjct: 123 QMGSELIGSKKPIADAEVINMAIDGLKEINMDFEINIGHLGVLKGVFEKYDLSDDEGTEI 182

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R  + +    L            ++  +    V       ++ S++  +  E    +  
Sbjct: 183 RRLIDKEDMEGLKTVLSRIESEKNIEISKKVFEVLELKGGREVISKLKEKLAEFESSVEA 242

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
              LD           I     R       Y   +       E+    E         ++
Sbjct: 243 LENLDSILEFVPHEYIINFGIARGLD----YYTGMVF-----EIYGKREG-------ARQ 286

Query: 295 KKKIYNETYPIDEDFLACLTEMP-QSSGIAMGFDRLVMLVTGANNINE 341
                      D + +      P  + G A GFDR +ML     NI++
Sbjct: 287 VCGGGR----YD-NLIELFEGEPSPAVGFAYGFDR-IML-----NIDD 323


>gi|325662328|ref|ZP_08150937.1| hypothetical protein HMPREF0490_01676 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471330|gb|EGC74553.1| hypothetical protein HMPREF0490_01676 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 415

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 99/353 (28%), Gaps = 47/353 (13%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNETHIRAFS 63
             +D   R    +  R+ +   ++E +    F  I++        L    G E     F 
Sbjct: 10  GMKDMLPRE---MQIRDYVIRLIKETYGTFGFSSIETPCVEHIENLSSKQGGENEKLIFK 66

Query: 64  T---------------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
                             ++   +R  L +  S  +S          K     + WR   
Sbjct: 67  ILKRGEKLKLDTAECEADLVDGGLRYDLTVPLSRYYSNNVSELPSPFKALQMGNVWRADR 126

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                  +F   +     E         + +I     +  +  F    V  N     + +
Sbjct: 127 PQRGRFRQFMQCDIDILGEPNNLA---EIELILATTTLLGKLDFKNFTVRINDRKILKAM 183

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL------ 222
                F      D+   LD  D+     +  + Q+ G      + +  +F  I       
Sbjct: 184 AAYSGFEEKDYDDVFIILDKMDKIGLDGVEKELQEHGYPKEAVEKYLQLFKEITNDIEGV 243

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
               E   G       D      +++ ++  AD + +    L    +             
Sbjct: 244 RYCKEKLEGYLEEATADGLEMIIASVDSVKEADFKLSFDPTLV-RGMSYYTG-------- 294

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP-QSSGIAMGFDRLVMLVT 334
                FE  M E           DE  +   T  P  + G ++GF+R+VML+ 
Sbjct: 295 ---TIFEIAMDEFGGSVGGGGRYDE-MIGKFTGQPTPACGFSIGFERIVMLLL 343


>gi|331086131|ref|ZP_08335213.1| hypothetical protein HMPREF0987_01516 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330406290|gb|EGG85804.1| hypothetical protein HMPREF0987_01516 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 415

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 99/353 (28%), Gaps = 47/353 (13%)

Query: 10  WNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNETHIRAFS 63
             +D   R    +  R+ +   ++E +    F  I++        L    G E     F 
Sbjct: 10  GMKDMLPRE---MQIRDYVIRLIKETYGTFGFSSIETPCVEHIENLSSKQGGENEKLIFK 66

Query: 64  T---------------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE 108
                             ++   +R  L +  S  +S          K     + WR   
Sbjct: 67  ILKRGEKLKLDTAECEADLVDGGLRYDLTVPLSRYYSNNVSELPSPFKALQMGNVWRADR 126

Query: 109 QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                  +F   +     E         + +I     +  +  F    V  N     + +
Sbjct: 127 PQRGRFRQFMQCDIDILGEPNNLA---EIELILATTTLLGKLDFKNFTVRINDRKILKAM 183

Query: 169 TVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL------ 222
                F      D+   LD  D+     +  + Q+ G      + +  +F  I       
Sbjct: 184 AAYSGFEEKDYDDVFIILDKMDKIGLDGVEKELQEHGYPKEAVEKYLQLFKEITNDIEGV 243

Query: 223 IEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
               E   G       D      +++ ++  AD + +    L    +             
Sbjct: 244 RYCKEKLEGYLEEATADGLEMIIASVDSVKEADFKLSFDPTLV-RGMSYYTG-------- 294

Query: 283 EQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP-QSSGIAMGFDRLVMLVT 334
                FE  M E           DE  +   T  P  + G ++GF+R+VML+ 
Sbjct: 295 ---TIFEIAMDEFGGSVGGGGRYDE-MIGKFTGQPTPACGFSIGFERIVMLLL 343


>gi|328480170|gb|EGF49115.1| asparaginyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 37

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 14/31 (45%)

Query: 318 QSSGIAMGFDRLVMLVTGANNINEVIWTPFS 348
             SG  +G +R +  +   +++ E I  P  
Sbjct: 1   PHSGFGLGLERAITWICKLDHLREAIPFPRM 31


>gi|74501411|sp|Q6WRH6|PYLS_METBA RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
 gi|33466218|gb|AAQ19545.1| PylS [Methanosarcina barkeri]
          Length = 419

 Score = 50.0 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 19/182 (10%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQT--SPE 83
            ++  + ++FV+  F+EI S  L  +   E       TEL  Q   + K L L+   +P 
Sbjct: 210 KLERDITKFFVDRGFLEIKSPILIPAEYVERMGINNDTELSKQIFRVDKNLCLRPMLAPT 269

Query: 84  FS-----CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
                    ++L     KIF     +R    G  H  EFTM+ +           +    
Sbjct: 270 LYNYLRKLDRILPGPI-KIFEVGPCYRKESDGKEHLEEFTMVNF----------CQMGSG 318

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
             R   E   ++   +  ++     +   +        + +++L + +  P   DR    
Sbjct: 319 CTRENLEALIKEFLDYLEIDFEIVGDSCMVYGDTLDIMHGDLELSSAVVGPVSLDREWGI 378

Query: 199 LQ 200
            +
Sbjct: 379 DK 380


>gi|21322023|gb|AAL40867.1| PylS [Methanosarcina barkeri]
          Length = 419

 Score = 50.0 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 64/182 (35%), Gaps = 19/182 (10%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQT--SPE 83
            ++  + ++FV+  F+EI S  L  +   E       TEL  Q   + K L L+   +P 
Sbjct: 210 KLERDITKFFVDRGFLEIKSPILIPAEYVERMGINNDTELSKQIFRVDKNLCLRPMLAPT 269

Query: 84  FS-----CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
                    ++L     K+F     +R    G  H  EFTM+ +           +    
Sbjct: 270 LYNYLRKLDRILPGPI-KVFEVGPCYRKESDGKEHLEEFTMVNF----------CQMGSG 318

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
             R   E   ++   +  ++     +   +        + +++L + +  P   DR    
Sbjct: 319 CTRENLEALIKEFLDYLEIDFEIVGDSCMVYGDTLDIMHGDLELSSAVVGPVSLDREWGI 378

Query: 199 LQ 200
            +
Sbjct: 379 DK 380


>gi|328876816|gb|EGG25179.1| hypothetical protein DFA_03427 [Dictyostelium fasciculatum]
          Length = 657

 Score = 50.0 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 91/316 (28%), Gaps = 18/316 (5%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
           +  +  +  ++S + +Y V++ F+E+ S +L            +               L
Sbjct: 330 QATVRLKASLESFVYQYLVKDSFMEVHSPTLTTV----ACYTHYPGHPTEHYTADAGYNL 385

Query: 79  QTS--PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
             S  P       L    +K+F      +             +    +   S   L  D 
Sbjct: 386 AYSIDPSVYHIM-LVGIFDKVFE---VVQQSTITTTWGVSRKLCNSTKIFVSTSTLYNDM 441

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
             I+     +  + +   +               +  +A ++              + H 
Sbjct: 442 SEILDSCKRLVIECLNHIEKSPFWAEKACINFGGSTDYAPFSGNGCLLKDGTILTLNPHQ 501

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
           +    Q+  +      + + I S +        + I    I      P S    +     
Sbjct: 502 IAKLLQEDDVMKMF-ASPNQISSAVRERFGVNMVVIQNEIIQSDQGIPTSDSLAMIDPVT 560

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
              + F +      + +    L DPIE   R       K +I  E  P+D   L  L   
Sbjct: 561 GEAQLFWVLLNGWLVASGSQRLNDPIEIEKRL------KSRINREQVPLDPSILNQLSYG 614

Query: 316 MPQSSGIAMGFDRLVM 331
            P + G ++ +D LV 
Sbjct: 615 NPYNGGFSLNYDLLVA 630


>gi|172053661|gb|ACB70968.1| pyrrolysyl-tRNA-synthetase [synthetic construct]
          Length = 420

 Score = 50.0 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 19/182 (10%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQT--SPE 83
            ++  + ++FV+  F+EI S  L  +   E       TEL  Q   + K L L+   +P 
Sbjct: 211 KLERDITKFFVDRGFLEIKSPILIPAEYVERMGINNDTELSKQIFRVDKNLCLRPMLAPT 270

Query: 84  FS-----CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
                    ++L     KIF     +R    G  H  EFTM+ +           +    
Sbjct: 271 LYNYLRKLDRILPGPI-KIFEVGPCYRKESDGKEHLEEFTMVNF----------CQMGSG 319

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
             R   E   ++   +  ++     +   +        + +++L + +  P   DR    
Sbjct: 320 CTRENLEALIKEFLDYLEIDFEIVGDSCMVYGDTLDIMHGDLELSSAVVGPVSLDREWGI 379

Query: 199 LQ 200
            +
Sbjct: 380 DK 381


>gi|238590701|ref|XP_002392399.1| hypothetical protein MPER_08028 [Moniliophthora perniciosa FA553]
 gi|215458374|gb|EEB93329.1| hypothetical protein MPER_08028 [Moniliophthora perniciosa FA553]
          Length = 227

 Score = 49.6 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 20/62 (32%)

Query: 1   MHQIPSQPWWNRD--FHYRRRP-----------FLLKRNMIQSSLREYFV----ENQFIE 43
           +HQIPS  +  +D    YR+R              + R+ I + +            F+E
Sbjct: 149 LHQIPSSHFGLKDQETRYRKRYLVFIISENTRHIFITRSKIINYI---LKVPPMNMGFME 205

Query: 44  ID 45
           ++
Sbjct: 206 VE 207


>gi|218883748|ref|YP_002428130.1| tRNA synthetase, class II (D, K and N) [Desulfurococcus
           kamchatkensis 1221n]
 gi|218765364|gb|ACL10763.1| tRNA synthetase, class II (D, K and N) [Desulfurococcus
           kamchatkensis 1221n]
          Length = 388

 Score = 49.6 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 90/315 (28%), Gaps = 42/315 (13%)

Query: 5   PSQPWWNRDFHYRRRPFLL---KRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRA 61
           P++   N   + RR   L      +++  ++R    E+ F E+ +  +     ++  +R 
Sbjct: 91  PAEYVRNYPIYIRRPEILRVVKTYSIVLRTMRRILDEHGFTELPAPIIG--YVSDPGLRG 148

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ----GCLHQPEF 117
               ++         Y   S     K+L A+  EKI+  A   R           H  EF
Sbjct: 149 AEKAIVKIYG---ETYEVQSSVIMYKQLYASLLEKIYYVARNLRIEPPENMYTGRHLVEF 205

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
           T ++   +  +   +M+     +                 +   F E            Y
Sbjct: 206 TQVDVEASITTASDMMRLAEETLYKTVRYMLNHYSELLTYDQVDFLE-----KTITKPPY 260

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
             ID  + L   ++    L + +           D +                       
Sbjct: 261 PRIDYDSALGLLERKGYRLEHGKEISFEAEAVLGDMYGT------------------PVW 302

Query: 238 LDRYP-APESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKK 296
           L  +P           P  P +   + L            E+LD   + +R+EK ++  K
Sbjct: 303 LHGFPTVSRGFYYMPDPEKPGYNIDYNLILPGHA-----GEVLDGGCREYRYEKLVERIK 357

Query: 297 KIYNETYPIDEDFLA 311
                       FL 
Sbjct: 358 YHGEPLEKY-RWFLE 371


>gi|14521875|ref|NP_127351.1| histidyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|13878794|sp|Q9UY31|SYH_PYRAB RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|5459095|emb|CAB50581.1| hisS histidyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 431

 Score = 49.6 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/328 (12%), Positives = 94/328 (28%), Gaps = 30/328 (9%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQYS------PGNET--HIRAFSTEL 66
           R FL    +KR  +   +RE F    F E+ +  ++Y+       G E    + AF  + 
Sbjct: 9   RDFLPEEMVKRRWVFEKIREVFETYGFKEVLTPVMEYTKLFQLRSGEEVVKQLYAFKDKG 68

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF-AHAWRNGEQGCLHQPEFTMLEWYRA 125
                +R  +    +          A +   + + A+ +R  E       EF        
Sbjct: 69  GRDVALRPDMTSSVA-RLYVNSFQTAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVELI 127

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
                +   + + +   +      K F+    +     E   +   +        D    
Sbjct: 128 GSDKIEADAEVIALFVDSYLSTGLKDFTVNIGDRVLLDEFAKMLGVK--------DDIGL 179

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +   D+ D+       +  G     ++    + + I   +I+           + + +  
Sbjct: 180 MRIIDKKDKLSQEEFLKALGEFGLDENGIEKVLNLI---EIKGKPDDVLPLAEELFTSER 236

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE--MQEKKKIYNETY 303
           +        +      +      I++        D       FE                
Sbjct: 237 AKEEISRLYNLVDILSWYEVDEWIQIDLGIARGFDYYT-SIVFEAIVPNDLGIGSIGGGG 295

Query: 304 PIDEDFLACLTEMP-QSSGIAMGFDRLV 330
             D + +      P  ++G A+G +RL+
Sbjct: 296 RYD-NLIEVFGGKPTPATGFAIGIERLI 322


>gi|256811168|ref|YP_003128537.1| histidyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256794368|gb|ACV25037.1| histidyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 413

 Score = 49.6 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 99/336 (29%), Gaps = 45/336 (13%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMS-----LQYSPGNET---HIRAFSTELIIQDH 71
             + KR  I++ LRE F    + EI + +     L      E     +  F      +  
Sbjct: 14  EEMKKRRFIENKLREVFERYGYKEILTPTFESFELIAKKTGEEIRKQLYVFKDHGGREMA 73

Query: 72  IRKPLYLQTSP--EFSCKKL-LAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
           +R  +   TSP   F   +L       +++ FA+ +R          EF  +        
Sbjct: 74  LRPEM---TSPVVRFYLNELKNLQKPLRLYYFANCFRYERPQAGRFREFWQMGCELIGCE 130

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA-RYANIDLGTTLD 187
                 + +N+        N                 E   V+E    +   +      D
Sbjct: 131 NPIADAEVLNLAMDGLININLDFDVHIGHLGVLKGVLEKFNVSEEEEVKIRRLIDKEDYD 190

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
           N +     +L  + ++    +       ++   +               IL  +P    A
Sbjct: 191 NLEAYLTQILGEEKKELIFEILKFKGGREVLDELRE-------------ILKDFPKSIEA 237

Query: 248 LANIYPADPRFTKRFELYACNIELCN-ACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           + N         +  E    +    N      LD       FE   ++  K        D
Sbjct: 238 INN-------LEEILEFVIHDKYTINLGIARGLDYYTGM-VFEIYGKKGAKQICGGGRYD 289

Query: 307 EDFLACLTEMP-QSSGIAMGFDRLVMLVTGANNINE 341
            + +      P  + G A GFDR++M      NI++
Sbjct: 290 -NLIETFGGEPTPAVGFAYGFDRIMM------NIDD 318


>gi|225434406|ref|XP_002277170.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 331

 Score = 49.6 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 42/159 (26%), Gaps = 6/159 (3%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   +  +   S +   +    A    ++ F   +R        H  EF M+E   A   
Sbjct: 87  DFFARQAFFTVSGQLLVETYACA-IGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFAD 145

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE----PEYITVAEAFARYANIDLGT 184
            +  M      ++   +                F +       +  +  F R +  +   
Sbjct: 146 LKDDMNCAEAYVKFLCQWLPDNCIDDMEFMAKNFDKGSIDHLRMVASMPFERISYAEAIK 205

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
            L+   + D+           +   HD   +     +  
Sbjct: 206 LLEEAIKKDKKFENKVEWGIDLASEHDQILASRLETLFD 244


>gi|150399673|ref|YP_001323440.1| histidyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166228584|sp|A6UQQ6|SYH_METVS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|150012376|gb|ABR54828.1| histidyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 418

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 53/337 (15%), Positives = 99/337 (29%), Gaps = 38/337 (11%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNET--HIRAFSTEL 66
           R FL     KR +I+  LR  F    F EI++ +      L    G E    +  F+   
Sbjct: 9   RDFLPVEMKKRKLIEKKLRNIFDSYNFSEINTPTFESFELLSKKTGEEIRNQLFVFNDHG 68

Query: 67  IIQDHIRKPLYLQTSPEFSCKKL-LAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
             +  +R       +  F   +        K++ F + +R          EF  +     
Sbjct: 69  NREMGLRPEFTSSVA-RFYINEFKNTPKPVKMYYFGNCFRYENPQAGRYREFWQMGAELI 127

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
             +      + +N+     +  N                 E  +++E        D    
Sbjct: 128 GSNKSISDAEVLNMAIEGLKSINMDFEINIGHLGVLKGVFEKYSLSE-------EDETLI 180

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
               D+ D   L     +  I    +   S     +L  K    +       L  +    
Sbjct: 181 RRLIDKEDTEGLKQVLLK--IEEEKNIEISKKVFEVLTLKGGKEVISKLKEKLTDFEKSL 238

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
            AL N+        +  EL   +  +       LD       FE   +++          
Sbjct: 239 DALNNLD-------EILELVPHDYVVNFGIARGLDYYTGM-VFEIYGKKEGARQVCGGGR 290

Query: 306 DEDFLACLTEM-PQSSGIAMGFDRLVMLVTGANNINE 341
            ++ +         + G A GFDR+++      NI++
Sbjct: 291 YDNLIELFEGEKSPAVGFAYGFDRIIL------NIDD 321


>gi|1169260|sp|P41908|SYNC_SACDO RecName: Full=Asparaginyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Asparagine--tRNA ligase; Short=AsnRS
 gi|2133232|pir||S43538 DED81D protein - yeast (Saccharomyces sp.) (fragment)
 gi|471339|emb|CAA52090.1| DED81D [Saccharomyces douglasii]
          Length = 87

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 8/64 (12%), Positives = 18/64 (28%), Gaps = 3/64 (4%)

Query: 287 RFEKEMQEKKKIYNETYPID--EDFLACL-TEMPQSSGIAMGFDRLVMLVTGANNINEVI 343
           R +   +       E    D    F+           G  +G +R++  +     + +  
Sbjct: 17  RIDDMNELMAGFKREGIDTDAYYWFIDQRKYGTCPHGGYGIGTERILAWLCDRFTVRDCS 76

Query: 344 WTPF 347
             P 
Sbjct: 77  LYPR 80


>gi|294666321|ref|ZP_06731570.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292603923|gb|EFF47325.1| lysyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 144

 Score = 49.3 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 41/69 (59%)

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
           TSPE+  K+LLAAG    +     +RNGE G  H PEF+MLEWYR   +  +L ++ + +
Sbjct: 4   TSPEYPLKRLLAAGVGDCYELGRVFRNGEAGGRHNPEFSMLEWYRVGWNDRRLAQETIEL 63

Query: 140 IRCAAEVAN 148
           +R A  +  
Sbjct: 64  VRRALALVG 72


>gi|68070507|ref|XP_677165.1| asparagine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56497171|emb|CAH96070.1| asparagine--tRNA ligase, putative [Plasmodium berghei]
          Length = 886

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 318 QSSGIAMGFDRLVMLVTGANNIN 340
              G+A+G DR  ML+    NI 
Sbjct: 859 PHGGMALGLDRFFMLLLNLANIK 881



 Score = 41.2 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 60/204 (29%), Gaps = 18/204 (8%)

Query: 73  RKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRA-HESYE 130
            + + L  SP+F  + ++    EKIF   +++RN +     H  EF  L+  +  + +Y 
Sbjct: 362 NENIILAQSPQFYKQMIINYDYEKIFEINYSYRNEKFHSTKHLNEFLSLDTEQVIYNNYY 421

Query: 131 QLMKDCMNIIRCAAEVANQKIFS--------FQNVNCNPFSEPEYITVAEA---FARYAN 179
           +++    N ++      N             +   N +   EP  IT       F    N
Sbjct: 422 EIIIYIYNFLKKIVNYINTNFIQEIALINLIYGKKNSHTSFEPTMITDTPIVLTFCEAHN 481

Query: 180 IDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSR-----ILIEKIEPNLGINC 234
           I         D    +     +Q   I          I        +    I  +   N 
Sbjct: 482 ILKKYYYIKNDIKFCNNCKEISQNGYIYDKQYKMCVKILDENEKNQLKKNIIFEDFNKNK 541

Query: 235 CTILDRYPAPESALANIYPADPRF 258
                 Y    +    +   +   
Sbjct: 542 QLHNIYYNNKIANNYKVDIKNCEN 565


>gi|47207855|emb|CAF90608.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 664

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 11/135 (8%)

Query: 65  ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYR 124
           +L +     +   L  SP+   + L+ AG ++ F  A  +R+       QPEFT ++   
Sbjct: 173 QLFMSARAGQFYSLPQSPQQFKQLLMVAGIDRYFQIARCYRDEGSKPDRQPEFTQVDIEM 232

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
           +      +M     +++           S+ +         + +T  EA   Y  +D   
Sbjct: 233 SFVEQTGIMSLVEALLQH----------SWPDQLGPLQLPFQTMTFEEAMRDY-GVDKPD 281

Query: 185 TLDNPDQPDRHLLYL 199
           T       +   ++L
Sbjct: 282 TRFAMKLVELRDVFL 296


>gi|21227547|ref|NP_633469.1| pyrolysyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|74550423|sp|Q8PWY1|PYLS_METMA RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
 gi|20905927|gb|AAM31141.1| hypothetical protein MM_1445 [Methanosarcina mazei Go1]
          Length = 454

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 9/104 (8%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQT--SPE 83
            ++  +  +FV+  F+EI S  L      E       TEL  Q   + K   L+   +P 
Sbjct: 245 KLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPN 304

Query: 84  FS-----CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
                    + L     KIF     +R    G  H  EFTML +
Sbjct: 305 LYNYLRKLDRALPDPI-KIFEIGPCYRKESDGKEHLEEFTMLNF 347


>gi|83282593|ref|XP_729837.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23488802|gb|EAA21402.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 707

 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 55/172 (31%), Gaps = 39/172 (22%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH--------- 71
               +N++   +R+   E+++IEI +  L        +      +    ++         
Sbjct: 483 IFNLKNLVIKKMRQILEEDKYIEIFTPKLTRIDKPPKNENNSPNQTDDSNYNVQTEMNNN 542

Query: 72  -------IRKPLY---------------------LQTSPEFSCKKLLAAGEEKIFCFAHA 103
                    K  +                     L  S +F  + ++    EKIF   ++
Sbjct: 543 INKIKQNYDKTNFTELNGSEGGSNCFKIENENIILAQSSQFYKQMIINYDYEKIFEINYS 602

Query: 104 WRNGE-QGCLHQPEFTMLEWYRA-HESYEQLMKDCMNIIRCAAEVANQKIFS 153
           +RN +     H  EF  L+  +  + ++ +++    N ++      N     
Sbjct: 603 YRNEKFHSTKHLNEFLSLDIEQVIYNNHYEVIIYIYNFLKKIINYVNTNFIQ 654


>gi|302874473|ref|YP_003843106.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
 gi|307690920|ref|ZP_07633366.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
 gi|302577330|gb|ADL51342.1| tRNA synthetase class II (D K and N) [Clostridium cellulovorans
           743B]
          Length = 324

 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/333 (9%), Positives = 95/333 (28%), Gaps = 57/333 (17%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
             L  +  I  ++ ++  +N  + +    +  +P  +T       E     +  +   + 
Sbjct: 31  TILKIQQGILRAVDDFMYKNGVVRMM-PLMI-APVTDTLNHD--VEETSITYQNQNFDVM 86

Query: 80  TSPEFSCK-KLLAAGEEKIFCFAHAWRNGEQ---GCLHQPEFTMLEWYRAHESYEQLMKD 135
            S  F  +  L+  G EKI+  +   R          H  EFT +++   + + + ++  
Sbjct: 87  KSMIFHKQLTLMNEGLEKIYIVSPNIRLERAERGDSRHLFEFTQIDFEFKNANMDDILTF 146

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
             +++        +K                                          +  
Sbjct: 147 IESLVSYIFSEVKEKY---------------------------------------AKEIE 167

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE--PNLGINCCTILDRYPAPESALANIYP 253
            +    +   I        +    ++     E   +        L  +        ++  
Sbjct: 168 EIAGSTEHLNITTPFLRYDTKDLEKLHGPDFEGIASRQATQPFFLTNHKREFYDAEDLNN 227

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
                   ++L            E L   E+ + +E+ ++   ++ ++ +          
Sbjct: 228 RGNYR--NYDLIWPR-----GYVEGLSGGEREYLYERIIERMDELNSDKHRFRSYLKLAK 280

Query: 314 TEM-PQSSGIAMGFDRLVMLVTGANNINEVIWT 345
             + P+++G  +G +R+   V     ++ V   
Sbjct: 281 DGLIPKTAGAGLGVERMTRFVCQLPEVDAVTVF 313


>gi|19913912|gb|AAM03608.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 404

 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 61/182 (33%), Gaps = 19/182 (10%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQT--SPE 83
            ++  + ++FV+  F+EI S  L  +   E       TEL  Q   I K   L+   +P 
Sbjct: 195 KLEREITKFFVDRGFLEIKSPILIPAEYVERMGINSDTELSKQVFRIDKNFCLRPMLAPN 254

Query: 84  FS-----CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
                    + L     KIF     +R    G  H  EFTML +           +    
Sbjct: 255 LYNYLRKLDRALPDPI-KIFEIGPCYRKESDGKEHLEEFTMLNF----------CQMGSG 303

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
             R   E    +  +   ++     +   +        + +++L + +  P   DR    
Sbjct: 304 CTRENLEAIITEFLNHLGIDFEIIGDSCMVYGNTLDVMHDDLELSSAVVGPVPLDREWGI 363

Query: 199 LQ 200
            +
Sbjct: 364 DK 365


>gi|156095556|ref|XP_001613813.1| asparagine-tRNA ligase [Plasmodium vivax SaI-1]
 gi|148802687|gb|EDL44086.1| asparagine-tRNA ligase, putative [Plasmodium vivax]
          Length = 1047

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 8/98 (8%)

Query: 46  SMSLQYSPGNETHIRAFSTELIIQDH-------IRKPLYLQTSPEFSCKKLLAAGEEKIF 98
           + +   +P   T     S +L   +          + L L  SP+F  + L+ A  E+++
Sbjct: 525 TPAAYTTPAAHTDGEPPSCQLNGSEGGSGCYKIEGEKLILAQSPQFYKQMLINADFERVY 584

Query: 99  CFAHAWRNGE-QGCLHQPEFTMLEWYRAHESYEQLMKD 135
              +++RN       H  EF  L+  R   +    +  
Sbjct: 585 EMNYSYRNERFHTSRHLNEFLSLDIERVIYNNYYEIVM 622



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 18/53 (33%), Gaps = 4/53 (7%)

Query: 3   QIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN 55
           Q PS    +   H         ++ +   LR+    +   E+ +  L +  G 
Sbjct: 408 QHPSLHHRHPVNHL----VFQMKSRVAHRLRQMLQRDGHTEVFTPKLVHLGGG 456


>gi|91774018|ref|YP_566710.1| pyrolysyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|118573260|sp|Q12UB6|PYLS_METBU RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
 gi|91713033|gb|ABE52960.1| Pyrrolysyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 416

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 66/209 (31%), Gaps = 26/209 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLK--------R-NMIQSSLREYFVENQFIEIDSMSLQYSPG 54
           +P      ++   RRR  L K        R   ++  + E+FV+  F+EI S  +     
Sbjct: 175 LPEFKVLEKELIQRRRDDLKKMYEEDREDRLGKLERDITEFFVDRGFLEIKSPIMIPFEY 234

Query: 55  NETHIRAFSTELIIQ-DHIRKPLYLQT--SPEFS----CKKLLAAGEEKIFCFAHAWRNG 107
            E         L  Q   + + + L+   +P           +     +IF     +R  
Sbjct: 235 IERMGIDKDDHLNKQIFRVDESMCLRPMLAPCLYNYLRKLDKVLPDPIRIFEIGPCYRKE 294

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
             G  H  EFTM+ +           +      R   E    +      +     ++   
Sbjct: 295 SDGSSHLEEFTMVNF----------CQMGSGCTRENMEALIDEFLEHLGIEYEIEADNCM 344

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHL 196
           +        + +++L + +  P   DR  
Sbjct: 345 VYGDTIDIMHGDLELSSAVVGPIPLDREW 373


>gi|296084903|emb|CBI28312.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/165 (10%), Positives = 41/165 (24%), Gaps = 10/165 (6%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   +  +   S +   +    A    ++ F   +R        H  EF M+E   A   
Sbjct: 100 DFFARQAFFNVSGQLQVETYACA-IGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFAD 158

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            +  M      ++   +                  E       +    +  +      + 
Sbjct: 159 LKDDMNCAKAYVKFLCQWLPDNCIDD--------MEFMAKIFDKGSIDHLRMVASMPFER 210

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGIN 233
               +   L  +A +   +  +   W    +    + +    G  
Sbjct: 211 ISYAEAIKLLEEAVKKDKKFENKVEWGIDLASEHDQILASRQGHI 255


>gi|301112569|ref|XP_002998055.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262112349|gb|EEY70401.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 270

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 45/183 (24%), Gaps = 14/183 (7%)

Query: 35  YFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLL-AAG 93
           +F  + ++EI +  L    G  +             +  +   L   P+         A 
Sbjct: 58  HFSSSYYVEIHTPKLV---GGAS---VSGANYFTLKYFDQDATLAQCPQTYKHMACDVAS 111

Query: 94  EEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIF 152
            E++F     +R        H  E   L+     +++   +                   
Sbjct: 112 LERVFEIGPGFRAETSNTHRHMCELVGLDLEMTIKAHYHKVLTEKEKWLGRLIKEKYDTD 171

Query: 153 SFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP------DQPDRHLLYLQAQQAGI 206
            +          P Y        R++N                   D  LL  +  + G+
Sbjct: 172 FYILDKFPLAVRPFYTMPDPTDKRWSNSYDIMIRGEEMVLCAQHVHDPKLLMERMDELGV 231

Query: 207 RVA 209
              
Sbjct: 232 PQE 234


>gi|161484944|ref|NP_615128.2| pyrolysyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|118573258|sp|Q8TUB8|PYLS_METAC RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
          Length = 443

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 61/182 (33%), Gaps = 19/182 (10%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQT--SPE 83
            ++  + ++FV+  F+EI S  L  +   E       TEL  Q   I K   L+   +P 
Sbjct: 234 KLEREITKFFVDRGFLEIKSPILIPAEYVERMGINSDTELSKQVFRIDKNFCLRPMLAPN 293

Query: 84  FS-----CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
                    + L     KIF     +R    G  H  EFTML +           +    
Sbjct: 294 LYNYLRKLDRALPDPI-KIFEIGPCYRKESDGKEHLEEFTMLNF----------CQMGSG 342

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
             R   E    +  +   ++     +   +        + +++L + +  P   DR    
Sbjct: 343 CTRENLEAIITEFLNHLGIDFEIIGDSCMVYGNTLDVMHDDLELSSAVVGPVPLDREWGI 402

Query: 199 LQ 200
            +
Sbjct: 403 DK 404


>gi|308048387|ref|YP_003911953.1| aspartate-ammonia ligase [Ferrimonas balearica DSM 9799]
 gi|307630577|gb|ADN74879.1| aspartate-ammonia ligase [Ferrimonas balearica DSM 9799]
          Length = 325

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 92/341 (26%), Gaps = 46/341 (13%)

Query: 18  RRPFLLKRNMIQSSLREYFVEN-----QFIEIDSMSLQYSPGN-------ETHIRAFSTE 65
           +R ++ K+  I + +R+ F          +E+ +  L                  +   +
Sbjct: 2   KRAYIEKQQKI-ALIRDTFARELSARLNLLEVQAPILSEVGSGIQDGLSGTEKAVSVQVK 60

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE--QGCLHQPEFTMLEWY 123
            + +        L      +  +      E I     A R  E   G  H       +W 
Sbjct: 61  TLPERRFEVVHSLAKWKRATLGRYQFGPGEGILAQMKALRPDEAILGPKHSVYVDQWDWE 120

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +     E+ +      +            + Q  +  P   PE +T   A A        
Sbjct: 121 QVMGREERTLSGLKARVEAIWSALKATEAALQAQHGIPAQLPETLTFMHAEA-------- 172

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
                PD P         Q+ G               I  E  +           D + +
Sbjct: 173 LRQHYPDLPASERERRICQELGAVF---------LIGIGGELADGQPHDMRAPDYDDWSS 223

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                              +L   N  L +A  EL     +      + Q +        
Sbjct: 224 ETEL---------GRGLNGDLLVWNPVLGDAF-ELSSMGVRVDSLALQHQMRVAGSESGL 273

Query: 304 PIDEDFLACLTE--MPQSSGIAMGFDRLVMLVTGANNINEV 342
                    L    +PQ+ G  +G  RLVML+ GA +I +V
Sbjct: 274 AQPWH--QSLLGGQLPQTIGGGIGQSRLVMLLLGAEHIGQV 312


>gi|18976636|ref|NP_577993.1| histidyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|32130125|sp|Q8U431|SYH_PYRFU RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|18892205|gb|AAL80388.1| histidyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 432

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 98/337 (29%), Gaps = 48/337 (14%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQYS------PGNET--HIRAFSTEL 66
           R FL    +KR  +   +RE F    F E+ + +++Y+       G E    + AF  + 
Sbjct: 9   RDFLPEEMVKRRWVFERIRERFETYGFKEVLTPTMEYTKLFELRSGEEVVKQLYAFKDKG 68

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF-AHAWRNGEQGCLHQPEFTMLEWYRA 125
                +R  +    +          A +   + + A+ +R  E       EF        
Sbjct: 69  GRDVSLRPDMTSSVA-RLYVNMFQTAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVELI 127

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP-EYITVAEAFARYANIDLGT 184
                +   + + +   +      + F+    +     E  + + V +       ID   
Sbjct: 128 GSDKVEADAEVIALFVESYLATGLREFTVNIGDRILLDEFAKMLGVKDDIGLMRIIDKKD 187

Query: 185 TLDNPDQP--------DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
            L   D          D++ +    +   I+   D+    +   +   ++     IN   
Sbjct: 188 KLPQEDFINALKEFGLDKNGIEKVLELINIKGKPDEVL-PLAEELFTSEV-AKNEINRLY 245

Query: 237 ILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE--MQE 294
            L         + +    D    + F+ Y                      FE       
Sbjct: 246 ALID-LLEAYEVKDWIRIDLGIARGFDYYTS------------------IVFEAIAPNDL 286

Query: 295 KKKIYNETYPIDEDFLACLTEMP-QSSGIAMGFDRLV 330
                      D + +      P  ++G A+G +RL+
Sbjct: 287 GIGSIGGGGRYD-NLIEVFGGKPTPATGFAIGIERLI 322


>gi|37524084|ref|NP_927428.1| asparagine synthetase AsnA [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|47115707|sp|Q7NA83|ASNA_PHOLL RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|36783507|emb|CAE12347.1| Aspartate--ammonia ligase (Asparagine synthetase A) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 330

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 89/328 (27%), Gaps = 40/328 (12%)

Query: 29  QSSLREYFV-----ENQFIEIDSMSL-------QYSPGNETHIRAFSTELIIQDHIRKPL 76
            S ++ +F      +   IE+    L       Q +            + +         
Sbjct: 12  ISFVKSFFSRLLESKLGLIEVQGPILSCLGDGIQDNLSGHEKAVQVKVKTLPDSTFEVVH 71

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L      +  +     E+ ++    A R  E              Y     +E++M+D 
Sbjct: 72  SLAKWKRRTLGRFGFQPEQGLYTHMKALRPDEDRLTPIHS-----VYVDQWDWEKVMEDG 126

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +    +   +   + +        E            + + +   +   PD   +  
Sbjct: 127 QRSLAYLKQTVGKIYEAIKETEKAVNKEFGLAPFLPDQIHFVHSETLLSRY-PDLDAKGR 185

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
               A++ G         + +      +   P+         D +        +I   +P
Sbjct: 186 ERAIAKELGAVFLIGIG-AKLSDGQSHDVRAPDYDDWTTPNSDGF---VGLNGDIIVWNP 241

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
                FE+ +  I                   E+++        E    D      L   
Sbjct: 242 VLEDAFEISSMGIR------------VDAEALERQLALTS--DEERLQYDWH--QALLKG 285

Query: 316 -MPQSSGIAMGFDRLVMLVTGANNINEV 342
            MPQS G  +G  RLVML+    +I +V
Sbjct: 286 DMPQSIGGGIGQSRLVMLLLQMKHIGQV 313


>gi|45359177|ref|NP_988734.1| histidyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|46396586|sp|P60921|SYH_METMP RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|45048052|emb|CAF31170.1| histidyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 416

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 101/358 (28%), Gaps = 63/358 (17%)

Query: 7   QPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNE--TH 58
           +P   RDF       + KR  I+  LR+ F    F EI++ +      L    G+E  T 
Sbjct: 4   KPKGTRDFLP---EEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQ 60

Query: 59  IRAFSTELIIQDHIRKPLYLQTSPEFSCKKL-LAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
           +  F      +  +R  L    +  F   +        K++ F + +R          EF
Sbjct: 61  LFVFRDHGDREMGLRPELTSSVA-RFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREF 119

Query: 118 TMLEWY-----RAHESYEQLMK--------DCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
             +        +     E +          +    I        + +F   N++ +  +E
Sbjct: 120 WQMGSELIGSKKPIADAEVVNMAIEGLKEINMDFEIHIGHLGVLKGVFEKYNLSDDEGNE 179

Query: 165 PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
              +   E      ++      +   +  + +  +   + G  V        +       
Sbjct: 180 IRRLIDKEDMDGLKSVLSRLESEKNIEISKKVFEVLDLKGGKEVIP-ILKEKLADFESSV 238

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQ 284
               NL      +   Y             +    +  + Y   +       E       
Sbjct: 239 AALENLDSILEFVPHDY-----------VINFGIARGLDYYTGMVFEVYGKKEG------ 281

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLTEMP-QSSGIAMGFDRLVMLVTGANNINE 341
                   ++           D + +      P  + G A GFDR +ML     NI++
Sbjct: 282 -------AKQVCGGGR----YD-NLIELFEGEPSPAVGFAYGFDR-IML-----NIDD 321


>gi|170047587|ref|XP_001851297.1| lysyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167869973|gb|EDS33356.1| lysyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 220

 Score = 47.7 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSSG 321
            RFE++  +     +ET   DE+F   L   +P + G
Sbjct: 184 KRFEQQAADTATGDDETQLEDENFCNALGYGLPSTGG 220


>gi|76156335|gb|AAX27553.2| SJCHGC05024 protein [Schistosoma japonicum]
          Length = 242

 Score = 47.7 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 7/53 (13%), Positives = 22/53 (41%), Gaps = 13/53 (24%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQSSLREYFVENQ 40
           ++Q+P   +   +++  +R+R              + R  I + +R++  +  
Sbjct: 190 LYQLPHMHYGVKDKETRFRQRYLDLLMNEEVRRRFITRARIVNYVRKFLDDLG 242


>gi|237845635|ref|XP_002372115.1| OB-fold nucleic acid binding domain-containing protein [Toxoplasma
           gondii ME49]
 gi|211969779|gb|EEB04975.1| OB-fold nucleic acid binding domain-containing protein [Toxoplasma
           gondii ME49]
          Length = 309

 Score = 47.3 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 11/76 (14%)

Query: 32  LREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
           +RE+F    ++E+   +L      G  T        L   D+  +  +L  S +   +  
Sbjct: 242 MREHFYNAGYVEVAPPTLVQTQVEGGST--------LFNLDYFGEQSFLTQSSQLYLETC 293

Query: 90  LAAGEEKIFCFAHAWR 105
           +      +FC A ++R
Sbjct: 294 IP-TLGDVFCIAQSYR 308


>gi|14590195|ref|NP_142260.1| asparagine synthetase A [Pyrococcus horikoshii OT3]
 gi|3256659|dbj|BAA29342.1| 294aa long hypothetical asparaginyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 294

 Score = 47.3 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/336 (12%), Positives = 89/336 (26%), Gaps = 78/336 (23%)

Query: 24  KRNMIQSSLREYFVENQFIEIDSMSLQYSPGN------ETHIRAFSTELIIQDHIRKPLY 77
            +  I   + +YF+   F  +  + L            E  ++    E+       K + 
Sbjct: 17  IQTRILDYMTKYFLGKGFKWLLPVMLSPITDPLWPDPAEEGVKPLEVEV-----YGKKMR 71

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ---GCLHQPEFTMLEWYRAHESYEQLMK 134
           L  S     +  +A G +KIF  +   R   +      H  EFT  ++       + ++ 
Sbjct: 72  LTHSMILHKQLAIAMGLKKIFVLSPNIRIETRERDDGKHAYEFTQFDFEVEGAKMKDIIS 131

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
               ++      A                             +   D            +
Sbjct: 132 LVEELMHGLFRKA---------------------------EEWTGRDFPKARHFKVYEYK 164

Query: 195 HLLYLQ-AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
            +L    + +   +V  +  W  + +           G+                     
Sbjct: 165 DILDEFGSDEKASQVMEEPFW--VINIPREFYDREEDGVWRNY----------------- 205

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-C 312
                      Y     L     E     E +   E   + +    +E       +L   
Sbjct: 206 ------DLILPYGYGEVLSGGERE----WEYQKIIE---KIRASGLSEESFKP--YLEIA 250

Query: 313 LTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
               +  S+G  +G +RLV  +  A++++EV   P 
Sbjct: 251 RAGKLKPSAGAGIGVERLVRFIVSAHHVSEVQLFPR 286


>gi|15669189|ref|NP_247994.1| histidyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501004|sp|Q58406|SYH_METJA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|1591660|gb|AAB99003.1| histidyl-tRNA synthetase (hisS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 416

 Score = 47.3 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 97/336 (28%), Gaps = 45/336 (13%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMS-----LQYSPGNET---HIRAFSTELIIQDH 71
             + KR  +++ LRE F    + EI + +     L      E     +  F      +  
Sbjct: 17  EEMKKRRFVENKLREVFERYGYKEILTPTFESFELIAKKTGEEIRKQLYVFKDHGGREMA 76

Query: 72  IRKPLYLQTSP--EFSCKKL-LAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
           +R  +   TSP   F   +L       +++ FA+ +R          EF  +        
Sbjct: 77  LRPEM---TSPVVRFYLNELKNLQKPLRLYYFANCFRYERPQAGRFREFWQMGCELIGCK 133

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFA-RYANIDLGTTLD 187
                 + +N+                          E   V+E    +   +      D
Sbjct: 134 EPLADAEVLNLAMDGLINIGLDFDVHIGHLGVLKGVLEKFNVSEEEEVKIRRLIDKEDYD 193

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
           N       +L  + ++    +       ++   +               IL  +P    A
Sbjct: 194 NLKIYLTQILGEEKKELIFEILKFKGSREVLDELKE-------------ILKDFPKSMEA 240

Query: 248 LANIYPADPRFTKRFELYACNIELCN-ACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           + N         +  E    +    N      LD       FE   ++  K        D
Sbjct: 241 INN-------LEEILEFVIHDKYTINLGIARGLDYYTGM-VFEIYGKKGAKQICGGGRYD 292

Query: 307 EDFLACLTEMP-QSSGIAMGFDRLVMLVTGANNINE 341
            + +      P  + G A GFDR++M      NI++
Sbjct: 293 -NLIETFGGEPTPAVGFAYGFDRIMM------NIDD 321


>gi|162329880|pdb|2E3C|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase
 gi|185177681|pdb|2ZCD|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase In Complex With Amppnp
 gi|185177682|pdb|2ZCE|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase In Complex With Pyrrolysine And An Atp
           Analogue
 gi|215794561|pdb|2ZIN|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase In Complex With Boclys And An Atp
           Analogue
 gi|215794562|pdb|2ZIO|A Chain A, Crystal Structure Of The Catalytic Domain Of Pyrrolysyl-
           Trna Synthetase In Complex With Aloclys-Amp And Pnp
          Length = 291

 Score = 47.0 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 9/104 (8%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQT--SPE 83
            ++  +  +FV+  F+EI S  L      E       TEL  Q   + K   L+   +P 
Sbjct: 82  KLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPN 141

Query: 84  FS-----CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
                    + L     KIF     +R    G  H  EFTML +
Sbjct: 142 LYNYLRKLDRALPDPI-KIFEIGPCYRKESDGKEHLEEFTMLNF 184


>gi|73668380|ref|YP_304395.1| pyrolysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|118573259|sp|Q46E77|PYLS_METBF RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
 gi|72395542|gb|AAZ69815.1| Pyrrolysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 419

 Score = 47.0 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 7/103 (6%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQT--SPE 83
            ++  + ++FV+  F+EI S  L  +   E       TEL  Q   + K L L+   +P 
Sbjct: 210 KLERDITKFFVDRDFLEIKSPILIPAEYVERMGINNDTELSKQIFRVDKNLCLRPMLAPT 269

Query: 84  FS----CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
                     +     KIF     +R    G  H  EFTM+ +
Sbjct: 270 LYNYLRKLDRILPDPIKIFEVGPCYRKESDGKEHLEEFTMVNF 312


>gi|332158548|ref|YP_004423827.1| histidyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034011|gb|AEC51823.1| histidyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 433

 Score = 47.0 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 96/328 (29%), Gaps = 30/328 (9%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQYSP-----GNET---HIRAFSTEL 66
           R FL    +KR  +   +RE F    F E+ +  ++Y+        E     + AF  + 
Sbjct: 9   RDFLPEEMIKRRWVFERIREVFEAYGFKEVLTPVMEYTKLFQLRSGEEIVKQLYAFKDKG 68

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF-AHAWRNGEQGCLHQPEFTMLEWYRA 125
                +R  +    +          A +   + + A+ +R  E       EF        
Sbjct: 69  GRDVSLRPDMTSSVA-RLYVNSFQNAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVELI 127

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
                +   + + +   +      + F+    N     E      A+      NI L   
Sbjct: 128 GSDKVEADAEVIALFVESYLATGLRDFTVNIGNRILLDEF-----AKMLGVRDNIGLMRI 182

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPE 245
           +D  D+  +       +  G++    +   ++ +      I+           + + + +
Sbjct: 183 IDKRDKLTQEEFIKALKDFGLKDNKINKVLELIN------IKGKPDDVLPLAEELFNSGK 236

Query: 246 SALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE--MQEKKKIYNETY 303
           S               +   +  I +        D       FE     +          
Sbjct: 237 SMEEISRLYKLTELLEWYGVSEWIRIDLGIARGFDYYTGI-VFEAIAPNELGIGSIGGGG 295

Query: 304 PIDEDFLACLTEMP-QSSGIAMGFDRLV 330
             D + +      P  ++G A+G +RL+
Sbjct: 296 RYD-NLIEVFGGRPTPATGFAIGIERLI 322


>gi|157835845|pdb|2Q7E|A Chain A, The Structure Of Pyrrolysyl-Trna Synthetase Bound To An
           Atp Analogue
 gi|157835848|pdb|2Q7G|A Chain A, Pyrrolysine Trna Synthetase Bound To A Pyrrolysine
           Analogue (Cyc) And Atp
 gi|157835849|pdb|2Q7H|A Chain A, Pyrrolysyl-Trna Synthetase Bound To Adenylated Pyrrolysine
           And Pyrophosphate
 gi|169404687|pdb|2ZIM|A Chain A, Pyrrolysyl-Trna Synthetase Bound To Adenylated Pyrrolysine
           And Pyrophosphate
          Length = 291

 Score = 47.0 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 9/104 (8%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQT--SPE 83
            ++  +  +FV+  F+EI S  L      E       TEL  Q   + K   L+   +P 
Sbjct: 82  KLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPN 141

Query: 84  FS-----CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
                    + L     KIF     +R    G  H  EFTML +
Sbjct: 142 LYNYLRKLDRALPDPI-KIFEIGPCYRKESDGKEHLEEFTMLNF 184


>gi|172053663|gb|ACB70969.1| PylS-derived acetyl-lysine-tRNA synthetase [synthetic construct]
          Length = 420

 Score = 47.0 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 19/182 (10%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPLYLQT--SPE 83
            ++  + ++FV+  F+EI S  L  +   E       TEL  Q   + K L L+   +P 
Sbjct: 211 KLERDITKFFVDRGFLEIKSPILIPAEYVERMGINNDTELSKQIFRVDKNLCLRPMVAPT 270

Query: 84  FS-----CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN 138
                    ++L     KIF     +R    G  H  EFTM+ +           +    
Sbjct: 271 IFNYARKLDRILPGPI-KIFEVGPCYRKESDGKEHLEEFTMVNF----------FQMGSG 319

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
             R   E   ++   +  ++     +   +        + +++L + +  P   DR    
Sbjct: 320 CTRENLEALIKEFLDYLEIDFEIVGDSCMVYGDTLDIMHGDLELSSAVVGPVSLDREWGI 379

Query: 199 LQ 200
            +
Sbjct: 380 DK 381


>gi|167745152|gb|ABZ91898.1| cytoplasmic asparaginyl-tRNA synthetase [Exophiala dermatitidis]
          Length = 227

 Score = 46.6 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 36/101 (35%), Gaps = 13/101 (12%)

Query: 4   IPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRA 61
           + ++    R  +      +  R  +  + R+ ++E +  E+   ++      G  T    
Sbjct: 137 LDNRHLVLRGDNAS--AVMKVRAAVARAFRQTYLETRLTEVTPPAMVQTQVEGGAT---- 190

Query: 62  FSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAH 102
               L   D+  +  YL  S +   +  L +    +FC  +
Sbjct: 191 ----LFEFDYYGERAYLTQSSQLYLETCLPS-LGDVFCVVY 226


>gi|146304871|ref|YP_001192187.1| phenylalanyl-tRNA synthetase subunit alpha [Metallosphaera sedula
           DSM 5348]
 gi|172046956|sp|A4YIL1|SYFA_METS5 RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|145703121|gb|ABP96263.1| phenylalanyl-tRNA synthetase, alpha subunit [Metallosphaera sedula
           DSM 5348]
          Length = 465

 Score = 46.6 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 318 QSSGIAMGFDRLVMLVTGANNINE 341
            +    +G DRL ML  G  +I +
Sbjct: 427 PAGAWGIGIDRLAMLFLGVKDIRD 450


>gi|125975361|ref|YP_001039271.1| ATP phosphoribosyltransferase regulatory subunit [Clostridium
           thermocellum ATCC 27405]
 gi|256005493|ref|ZP_05430455.1| histidyl-tRNA synthetase 2 [Clostridium thermocellum DSM 2360]
 gi|281419321|ref|ZP_06250336.1| histidyl-tRNA synthetase 2 [Clostridium thermocellum JW20]
 gi|166219829|sp|A3DJE9|HISZ_CLOTH RecName: Full=ATP phosphoribosyltransferase regulatory subunit
 gi|125715586|gb|ABN54078.1| ATP phosphoribosyltransferase regulatory subunit [Clostridium
           thermocellum ATCC 27405]
 gi|255990548|gb|EEU00668.1| histidyl-tRNA synthetase 2 [Clostridium thermocellum DSM 2360]
 gi|281406941|gb|EFB37204.1| histidyl-tRNA synthetase 2 [Clostridium thermocellum JW20]
 gi|316939476|gb|ADU73510.1| histidyl-tRNA synthetase 2 [Clostridium thermocellum DSM 1313]
          Length = 418

 Score = 46.2 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 66/208 (31%), Gaps = 11/208 (5%)

Query: 32  LREYFVENQFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEF----- 84
           +R+ F  + + E+++  ++       E +I    T     D   + L L+          
Sbjct: 30  IRKVFRASGYYEVETPIVEFYDVFSTEENIIPQETMFKFFDQQGRILVLRPDLTIPIARV 89

Query: 85  -SCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
            + K   AA   +I    +A++  E G   Q EFT         +  +   + +     A
Sbjct: 90  AATKLKDAAYPLRISYIGNAFKYNELGGGKQKEFTQAGVEIIGVNTPEADAEVIATAIDA 149

Query: 144 AEVANQKIFSFQNVNCNPF---SEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            +    + F         F    E   ++  E       ID    L   +  + H +   
Sbjct: 150 VKATGLENFQIDIGQVEFFKGLMEETGLSEEETEKMRVLIDRKDFLGIEELVEEHNIRDD 209

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            ++  +        +D+  R+    I  
Sbjct: 210 LKELILDFPKLFGSTDVIDRVEKYPINE 237


>gi|289193081|ref|YP_003459022.1| histidyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939531|gb|ADC70286.1| histidyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 413

 Score = 46.2 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 99/336 (29%), Gaps = 45/336 (13%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMS-----LQYSPGNET---HIRAFSTELIIQDH 71
             + KR  I++ LRE F    + EI + +     L      E     +  F      +  
Sbjct: 14  EEMKKRRFIENKLREVFERYGYKEILTPTFETFELIAKKTGEEIRKQLYVFKDHGGREMA 73

Query: 72  IRKPLYLQTSP--EFSCKKL-LAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
           +R  +   TSP   F   +L       +++ FA+ +R          EF  +        
Sbjct: 74  LRPEM---TSPVVRFYLNELKNLQKPLRLYYFANCFRYERPQAGRFREFWQMGCELIGCK 130

Query: 129 YEQLMKDCMNIIRCAAEVANQKI-FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
                 + +N+                 ++        E+    E   +   +      +
Sbjct: 131 EPLADAEVLNLAMDGLINIGLDFDVHIGHLGVLKGVLEEFNVSEEEEVKIRRLIDKEDYE 190

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
           N +     +L  + ++    +       +I   +               IL  +P    A
Sbjct: 191 NLEVYLNEILGEEKKELIFDILKFKGGREILDELKE-------------ILKDFPKSIEA 237

Query: 248 LANIYPADPRFTKRFELYACNIELCN-ACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           + N+           E    +    N      LD       FE   ++  K        D
Sbjct: 238 IKNLEK-------ILEFVIHDKYTINLGIARGLDYYTGM-VFEIYGKKGAKQICGGGRYD 289

Query: 307 EDFLACLTEMP-QSSGIAMGFDRLVMLVTGANNINE 341
            + +      P  + G A GFDR++M      NI++
Sbjct: 290 -NLIETFGGEPTPAVGFAYGFDRIMM------NIDD 318


>gi|297620023|ref|YP_003708128.1| histidyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379000|gb|ADI37155.1| histidyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 417

 Score = 45.8 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 56/336 (16%), Positives = 96/336 (28%), Gaps = 36/336 (10%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNE--THIRAFSTEL 66
           R FL    LKR  I   LRE F      EI + +      L    G+E  + +  F    
Sbjct: 9   RDFLPSEMLKRKFIAQKLREVFDNYNIKEICTPTFESFDLLCKKTGDEIRSQLFVFKDHG 68

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
             +  +R  L    +  F  +        K +   + +R          EF  +      
Sbjct: 69  DREMGLRPELTSSVARYFINEFKNVPKPLKFYYLTNCFRYENPQAGRYREFWQMGCELIG 128

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
            +      + +N+     +  N K               E          +   D  +T 
Sbjct: 129 SNKCTADAEVLNLAIEGLKHINMKYEINIGHLGVLKGVFE---------EFNLSDDESTQ 179

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
                    +  L+     I      + S+I   IL  K    +       L ++P    
Sbjct: 180 IRRLIDKEDIDGLKEVLNVIESEKGISISNIVFEILDLKGNKEIIDILIEKLQKFPKSIE 239

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
           AL N+      + +   +    I         +         ++  ++           D
Sbjct: 240 ALENLKEI-LEYVEHEYIINFGIARGLDYYTGMVFEIYGT--KEGAKQVCGGGR----YD 292

Query: 307 EDFLACLTEMP-QSSGIAMGFDRLVMLVTGANNINE 341
            + +      P  + G A GFDR +ML     NI E
Sbjct: 293 -NLIELFEGEPTPAVGFAYGFDR-IML-----NIEE 321


>gi|116780371|gb|ABK21654.1| unknown [Picea sitchensis]
 gi|116780702|gb|ABK21779.1| unknown [Picea sitchensis]
          Length = 68

 Score = 45.8 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 15/59 (25%)

Query: 279 LDPIEQRHRFEKEMQE------------KKKIYNETYP--IDEDFLACLT-EMPQSSGI 322
           +DPI+QR  FE ++Q+            K+   +  Y   +DE FL  L   MP ++G+
Sbjct: 1   MDPIDQRTCFEAQIQQHNEARMASNLDGKEGQDDGAYEVTLDEYFLTALEYGMPPAAGM 59


>gi|268593526|ref|ZP_06127747.1| aspartate--ammonia ligase [Providencia rettgeri DSM 1131]
 gi|291310950|gb|EFE51403.1| aspartate--ammonia ligase [Providencia rettgeri DSM 1131]
          Length = 330

 Score = 45.8 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 43/328 (13%), Positives = 86/328 (26%), Gaps = 40/328 (12%)

Query: 29  QSSLREYFV-----ENQFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPL 76
            S ++ YF      E   IE+    L                      + I         
Sbjct: 12  ISFVKSYFSRLLEKELGLIEVQGPILSRLGDGTQDNLSGSEKAVQVKVKSIPGATFEVVH 71

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L      +  +   +  + ++    A R  E              Y     +E++M D 
Sbjct: 72  SLAKWKRKTLGRFGFSKGQGLYTHMKALRPDEDRLTPIHS-----VYVDQWDWEKVMADE 126

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +    +   +   + +        E            + + +       PD   +  
Sbjct: 127 ERTLPYLKQTVGKIYKAIKETEAAVSKEFGLAPFLPDQIHFIHSEELLQRY-PDLDAKGR 185

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
               A++ G           + S    +   P+         D +        +I   +P
Sbjct: 186 ERAIAKELGAVFLIGIG-GKLSSGESHDVRAPDYDDWTTKNEDGF---CGLNGDIIVWNP 241

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
                FEL +  I +                  +++        +   ++      L   
Sbjct: 242 VLQDAFELSSMGIRVSP------------ECLTRQLSL--TGDEKRMELEWH--QALVKG 285

Query: 316 -MPQSSGIAMGFDRLVMLVTGANNINEV 342
            MPQ+ G  +G  RLVML+    +I +V
Sbjct: 286 EMPQTIGGGIGQSRLVMLLLQRQHIGQV 313


>gi|150400469|ref|YP_001324235.1| histidyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166228578|sp|A6UT01|SYH_META3 RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|150013172|gb|ABR55623.1| histidyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 418

 Score = 45.4 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 103/335 (30%), Gaps = 42/335 (12%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNETHIRAFSTELIIQDHIRKP 75
           + KR +I++ L+  F+   F EI++ +      L    G +   + F      +DH  + 
Sbjct: 16  MKKRKIIENKLKSVFMAYNFNEINTPTFEYFELLSKKTGEDIRKQLFV----FKDHGNRE 71

Query: 76  LYLQTSPE-------FSCKKL-LAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHE 127
           + L+  PE       F   +L      +K+F FA+ +R  +       EF  +       
Sbjct: 72  MGLR--PEITSSVVRFYINELKNLPKPQKLFYFANCFRYEQPQAGRYREFWQMGCELLGS 129

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLD 187
                  + +N+        N                 E   + E        +      
Sbjct: 130 KNPIADAEVINLAMDGLNKINMDYEIHIGHLGVLKGVFEEFGLTED-------EELKIRR 182

Query: 188 NPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESA 247
             D+ D   L     +      +      IFS +  +     +  N   IL  YP    A
Sbjct: 183 LIDKEDYENLEKCLIELE-ENKNIIIKDIIFSVLNSKGTVEEVIGNLKEILKNYPKSIEA 241

Query: 248 LANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE 307
           L N+        +   +    I         +         ++  ++           D 
Sbjct: 242 LNNLEEIMEFVKRNNYIINLGIARGLDYYTGMVFEVYGK--KEGARQVCGGGR----YD- 294

Query: 308 DFLACLTEMP-QSSGIAMGFDRLVMLVTGANNINE 341
           + +      P  + G A GFDR +ML     NI++
Sbjct: 295 NLIELFEGAPTPAVGFAYGFDR-IML-----NIDD 323


>gi|330831465|ref|YP_004394417.1| asparagine synthetase A [Aeromonas veronii B565]
 gi|328806601|gb|AEB51800.1| Asparagine synthetase A [Aeromonas veronii B565]
          Length = 330

 Score = 45.4 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 42/323 (13%), Positives = 84/323 (26%), Gaps = 51/323 (15%)

Query: 37  VENQFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
            +   +E+ +  L               +      + + +        L      +  + 
Sbjct: 25  QQLGLMEVQAPILSRVGDGTQDNLSGHENAVQVKVKTLPEHSYEVVHSLAKWKRQTLGRF 84

Query: 90  LAAGEEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
                E I+    A R    +   +H       +W +   S  + +      +R      
Sbjct: 85  GFGPGEGIYTHMKALRPDEDKLTPIHSVYVDQWDWEKVMPSERRDLAYLQETVRGIWAAI 144

Query: 148 NQKI---FSFQNVNCNPFSEPEYITVAEAFARYANID---LGTTLDNPDQPDRHLLYLQA 201
                   +   +     +E +++   E  ARY ++D       +         +    A
Sbjct: 145 KATERAVCAEHELTPFLPAEIQFLHSEELLARYPDLDAKGRERAIAKELGAVFLIGIGGA 204

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
              G R        D +S      +    G                       +P     
Sbjct: 205 LSHGERHDVRAPDYDDWSSHSELGLAGLNGDILVW------------------NPVLKDS 246

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE--DFLACLTEMPQS 319
           FE+ +  I                    +++        +    D   D LA    MPQ+
Sbjct: 247 FEISSMGIR------------VDAEALRRQLAI--TGDEDRLQYDWHQDLLAAR--MPQT 290

Query: 320 SGIAMGFDRLVMLVTGANNINEV 342
            G  +G  RL ML+    +I +V
Sbjct: 291 IGGGIGQSRLAMLLLQKEHIGQV 313


>gi|117618980|ref|YP_858493.1| asparagine synthetase AsnA [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117560387|gb|ABK37335.1| aspartate--ammonia ligase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 370

 Score = 45.4 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 41/323 (12%), Positives = 82/323 (25%), Gaps = 51/323 (15%)

Query: 37  VENQFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
            +   +E+ +  L               +      + + +        L      +  + 
Sbjct: 65  QQLGLMEVQAPILSRVGDGTQDNLSGHENAVQVKVKTLPEHSYEVVHSLAKWKRQTLGRF 124

Query: 90  LAAGEEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
                E I+    A R        +H       +W +   S  + +      +R      
Sbjct: 125 GFGPGEGIYTHMKALRPDEDRLTPIHSVYVDQWDWEKVMPSERRDLAYLQETVRGIWAAI 184

Query: 148 NQKI---FSFQNVNCNPFSEPEYITVAEAFARYANID---LGTTLDNPDQPDRHLLYLQA 201
                   +   +     +E +++   E   RY ++D       +         +    A
Sbjct: 185 KATERAVCAEHELTPFLPAEIQFLHSEELLTRYPDLDAKGRERAIAKELGAVFLIGIGGA 244

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
              G R        D +S      +    G                       +P     
Sbjct: 245 LSHGERHDVRAPDYDDWSSHSELGLAGLNGDILVW------------------NPVLQDS 286

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE--DFLACLTEMPQS 319
           FE+ +  I                    +++        +    D   D LA    MPQ+
Sbjct: 287 FEISSMGIR------------VDAEALRRQLAI--TGDEDRLQYDWHQDLLAAR--MPQT 330

Query: 320 SGIAMGFDRLVMLVTGANNINEV 342
            G  +G  RL ML+    +I +V
Sbjct: 331 IGGGIGQSRLAMLLLQKEHIGQV 353


>gi|57641497|ref|YP_183975.1| histidyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|68744300|sp|Q5JIM2|SYH_PYRKO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|57159821|dbj|BAD85751.1| histidyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 436

 Score = 45.4 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/341 (11%), Positives = 86/341 (25%), Gaps = 51/341 (14%)

Query: 11  NRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS------PGNET--HIRAF 62
             +   +RR    +       +RE F    F E+ + + +Y+       G E    + AF
Sbjct: 14  LPEEMAKRRWVFER-------IREVFEGFNFQEVLTPTFEYTELFKLRSGEEVVKQLYAF 66

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF-AHAWRNGEQGCLHQPEFTMLE 121
             +      +R  +    +      +   A +   + + A+ +R  E       EF    
Sbjct: 67  QDKGGRDISLRPDMTSSVA-RLYVNRFQNAPKPIKWYYIANMFRYEEPQSGRYREFWQAG 125

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
                    +   + + +   +      + F+    +     E   +   E       + 
Sbjct: 126 VELIGSDRVEADAEVIALFTQSYLAVGLEDFTVNIGDRILLDEFAKMLGVEDDIGLMRLI 185

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRV-----------AHDDTWSDIFSRILIEKIEPNL 230
                 + ++    L        G+                   ++        K E   
Sbjct: 186 DKKDKMSREEFVGALREFGLNDDGVEKVLSLIEIKGLPDEVLPKAEELFTSEEAKAEIKR 245

Query: 231 GINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEK 290
                 +LD Y             D    + F+ Y   +                     
Sbjct: 246 LYELVDLLDAYGVS-----KWVRIDLGIARGFDYYTSVVFEA----------------IA 284

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMP-QSSGIAMGFDRLV 330
                          D + +      P  ++G A+G +RL+
Sbjct: 285 PNDLGIGSIGGGGRYD-NLIEVFGGKPTPATGFAIGIERLI 324


>gi|183597125|ref|ZP_02958618.1| hypothetical protein PROSTU_00364 [Providencia stuartii ATCC 25827]
 gi|188023435|gb|EDU61475.1| hypothetical protein PROSTU_00364 [Providencia stuartii ATCC 25827]
          Length = 330

 Score = 45.0 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 42/328 (12%), Positives = 87/328 (26%), Gaps = 40/328 (12%)

Query: 29  QSSLREYFV-----ENQFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPL 76
            S ++ YF      E   IE+    L                      + I         
Sbjct: 12  ISFVKSYFSRLLEKELGLIEVQGPILSRLGDGTQDNLSGHEKAVQVKVKSIPDATFEVVH 71

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L      +  +      + ++    A R  E              Y     +E++M D 
Sbjct: 72  SLAKWKRKTLGRFDFKQGQGLYTHMKALRPDEDRLTPIHS-----VYVDQWDWEKVMADE 126

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +    +   +   + +       SE            + + +       PD   +  
Sbjct: 127 ERTLPYLKQTVGKIYQAIKQTEAAISSEFGLAPFLPDQIHFIHSEELLQRY-PDLDAKGR 185

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
               A++ G           + +    +   P+         D +   +    +I   +P
Sbjct: 186 ERAIAKELGAVFLIGIG-GKLSNGEAHDVRAPDYDDWTTENEDGF---KGLNGDIIVWNP 241

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
                FE+ +  I +                  +++        +   ++      L   
Sbjct: 242 VLQDAFEISSMGIRVSP------------ECLTRQLSL--TGDEKRMELEWH--QALVEG 285

Query: 316 -MPQSSGIAMGFDRLVMLVTGANNINEV 342
            MPQ+ G  +G  RLVML+    +I +V
Sbjct: 286 KMPQTIGGGIGQSRLVMLLLQRQHIGQV 313


>gi|50118968|ref|YP_048135.1| asparagine synthetase AsnA [Pectobacterium atrosepticum SCRI1043]
 gi|81693493|sp|Q6DB95|ASNA_ERWCT RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|49609494|emb|CAG72927.1| putative asparagine synthetase A [Pectobacterium atrosepticum
           SCRI1043]
          Length = 330

 Score = 45.0 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 89/335 (26%), Gaps = 54/335 (16%)

Query: 29  QSSLREYFVEN-----QFIEIDSMSLQYSP-GNETHI--RAFSTELIIQDHIRKPLYLQT 80
            S ++ +F          IE+ +  L     G + ++     + ++ ++        +  
Sbjct: 12  ISFVKSFFSSQLEQLLGLIEVQAPILSRIGDGTQDNLSGTEKAVQVKVKALPDATFEVVH 71

Query: 81  SPEFSCKKLLAAG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
           S     +K L A      E I+    A R        +H       +W R  E  E+  +
Sbjct: 72  SLAKWKRKTLGAYDFSFGEGIYTHMKALRPDEDRLSPIHSVYVDQWDWERVMEDGERNAE 131

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
              + +    +       +           PE I                    PD   +
Sbjct: 132 YLKSTVTRIYQGIKATEAAVHQAFGIQPFLPEQIHFVHTE--------TLLKRYPDLDAK 183

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                 A++ G                               +   +     A       
Sbjct: 184 GRERAIAKELGAVFLIG---------------------IGGKLSSGHSHDVRAPDYDDWT 222

Query: 255 DPRFTKRFEL---YACNIELCNACDELLDPIEQ--RHRFEKEMQEKKKIYNETYPIDEDF 309
            P   +   L         + N   E+     +       +++   +    E   ++   
Sbjct: 223 TPGEQELAGLNGDIVVWNPVLNDAFEISSMGIRVDAEALTRQLALTQ--DEERLKLEWH- 279

Query: 310 LACL-TE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
              L    MPQ+ G  +G  RLVML+    +I +V
Sbjct: 280 -QALLRGEMPQTIGGGIGQSRLVMLLLQLPHIGQV 313


>gi|227113935|ref|ZP_03827591.1| asparagine synthetase AsnA [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 330

 Score = 45.0 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 44/335 (13%), Positives = 88/335 (26%), Gaps = 54/335 (16%)

Query: 29  QSSLREYFVEN-----QFIEIDSMSLQYSP-GNETHI--RAFSTELIIQDHIRKPLYLQT 80
            S ++ +F          IE+ +  L     G + ++     + ++ ++        +  
Sbjct: 12  ISFVKSFFSSQLEQLLGLIEVQAPILSRIGDGTQDNLSGTEKAVQVKVKALPDATFEVVH 71

Query: 81  SPEFSCKKLLAAG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
           S     +K L A      E I+    A R        +H       +W R     E+  +
Sbjct: 72  SLAKWKRKTLGAYDFSFGEGIYTHMKALRPDEDRLSPIHSVYVDQWDWERVMGDGERNAE 131

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
              + +    +       +           PE I                    PD   +
Sbjct: 132 YLKSTVTRIYQGIKATEAAVHQAFGIQPFLPEQIHFVHTE--------TLLQRYPDLDAK 183

Query: 195 HLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA 254
                 A++ G                               +   +     A       
Sbjct: 184 GRERAIAKELGAVFLIG---------------------IGGKLSSGHSHDVRAPDYDDWT 222

Query: 255 DPRFTKRFEL---YACNIELCNACDELLDPIEQ--RHRFEKEMQEKKKIYNETYPIDEDF 309
            P   +   L         + N   E+     +       +++   +    E   ++   
Sbjct: 223 TPGEQELAGLNGDIVVWNPVLNDAFEISSMGIRVDAEALTRQLALTQ--DEERLKLEWH- 279

Query: 310 LACL-TE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
              L    MPQ+ G  +G  RLVML+    +I +V
Sbjct: 280 -QALLRGEMPQTIGGGIGQSRLVMLLLQLPHIGQV 313


>gi|322696965|gb|EFY88750.1| putative asparaginase like 1 [Metarhizium acridum CQMa 102]
          Length = 386

 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 76/287 (26%), Gaps = 30/287 (10%)

Query: 73  RKPLYLQTSPEFSCKKLL--AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            +  YL  S +F  +  L         +    + R  +    H  +F  +E         
Sbjct: 114 GEDTYLADSQQFLLEYALRYNDKVRGAYYVGTSCRGEDHDSTHLNQFCHVECELRGG--- 170

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            L        R    V  + +    +V        +++T              T   +  
Sbjct: 171 -LDAGMDVANRYIVAVTEELLRRHGHVIKAQAGSTQHMTDLLQLFARNGNKFPTVTLDEA 229

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY---PAPESA 247
                +   +       VA          R   + +    G  C  +   +   P  ++ 
Sbjct: 230 LRLPEMDKGEGTMWEYTVAGRPECGRSLKRKGEQALVARFGGACWVVEMDHLGVPFYQAY 289

Query: 248 LANIY---PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE--T 302
                             E+  C      A DE L  +EQ H              E   
Sbjct: 290 ADASRSKALCGDLLLGLGEVVGCGNRHTTA-DEALAALEQHHV-----------DPECYA 337

Query: 303 YPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           + I+      L     ++G  +G +R +  V   +++ +V   P  +
Sbjct: 338 WYIEMRKFKAL----DTTGWGIGSERFLSWVLQHDDVRDVQLLPRLK 380


>gi|330720194|gb|EGG98579.1| Aspartyl-tRNA synthetase @ Aspartyl-tRNA(Asn) synthetase [gamma
           proteobacterium IMCC2047]
          Length = 55

 Score = 44.3 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/21 (52%), Positives = 16/21 (76%)

Query: 330 VMLVTGANNINEVIWTPFSQS 350
           +ML+TGA +I +VI  P +QS
Sbjct: 1   MMLMTGAASIRDVIAFPKTQS 21


>gi|213028495|ref|ZP_03342942.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 163

 Score = 44.3 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 5/38 (13%)

Query: 14  FHYRRRPFL-----LKRNMIQSSLREYFVENQFIEIDS 46
            H R R  L       R+ +  +L  +F E  F  + +
Sbjct: 125 AHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVST 162


>gi|238921731|ref|YP_002935246.1| asparagine synthetase AsnA [Edwardsiella ictaluri 93-146]
 gi|259585323|sp|C5BDG9|ASNA_EDWI9 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|238871300|gb|ACR71011.1| aspartate--ammonia ligase, putative [Edwardsiella ictaluri 93-146]
          Length = 330

 Score = 44.3 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 77/321 (23%), Gaps = 44/321 (13%)

Query: 36  FVEN-QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCK 87
             +    IE+ +  L                      + + QD       L      +  
Sbjct: 23  LEQRLGLIEVQAPILSRLGDGTQDNLSGHEKAVQVKVKNLPQDAFEVVHSLAKWKRKTLG 82

Query: 88  KLLAAGEEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
               A  E ++    A R        +H       +W R     E+        +R    
Sbjct: 83  MYDFAPGEGLYTHMKALRPDEDRLSAIHSVYVDQWDWERVMGDGERTPAYLQETVRHIYA 142

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                              P  I    + A                    L  +     G
Sbjct: 143 AMKTTEAEVCAQYGLTPFLPAEIHFIHSEALLRRYPDLDAKGRERAITHELGAVFLIGIG 202

Query: 206 IRVAHD---DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
            R+++    D  +  +        E   G+N   ++                +P     F
Sbjct: 203 GRLSNGQAHDVRAPDYDDWTSLGAEGFGGLNGDILVW---------------NPVLGDAF 247

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSG 321
           EL +  I                   ++++              +  L      MPQ+ G
Sbjct: 248 ELSSMGIR------------VDAKALKRQLALTDDEDRLALEWHQSLLR---GDMPQTIG 292

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  RLVML+    +I +V
Sbjct: 293 GGIGQSRLVMLLLQQQHIGQV 313


>gi|254780928|ref|YP_003065341.1| histidyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040605|gb|ACT57401.1| histidyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 496

 Score = 44.3 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 47/144 (32%), Gaps = 10/144 (6%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI----RAFSTELIIQDHIRKPLY 77
           +  RN I  S+R  +    F  I++  L+YS      +    R       +QD   + + 
Sbjct: 23  IRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWIS 82

Query: 78  LQTSPEFSCKKLLAAGEE------KIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQ 131
           L+        + +A   +      + +     +RN + G     +F   +      S E 
Sbjct: 83  LRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSAET 142

Query: 132 LMKDCMNIIRCAAEVANQKIFSFQ 155
              +   ++    E    K   + 
Sbjct: 143 ADAEMCMMMADTLEAVGIKRNDYH 166


>gi|298674282|ref|YP_003726032.1| pyrrolysyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298287270|gb|ADI73236.1| pyrrolysyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 414

 Score = 44.3 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 17/130 (13%)

Query: 26  NMIQSSLREYFVENQFIEIDSMSLQYSP-----GNETHIRAFSTELIIQDHIRKPLYLQT 80
             ++ ++ ++FV+  FIEI +  +         G +T  +          ++     L+ 
Sbjct: 204 AKLERTISQFFVDKGFIEIKAPIIIDIDSVKKMGIDTDHKLSK----QIFYLDNKHCLRP 259

Query: 81  --SPEFS--CKKL--LAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW--YRAHESYEQL 132
             +P      K    +     KIF     +R   +G  H  EFTM  +    +  + E L
Sbjct: 260 MLAPGLYQWLKNFDKILPDPIKIFEIGPCYRKESEGSQHLEEFTMFNFCQMGSGANRENL 319

Query: 133 MKDCMNIIRC 142
           +    ++++ 
Sbjct: 320 LNHIDDLLKH 329


>gi|260662667|ref|ZP_05863561.1| aspartate-ammonia ligase [Lactobacillus fermentum 28-3-CHN]
 gi|260552748|gb|EEX25747.1| aspartate-ammonia ligase [Lactobacillus fermentum 28-3-CHN]
          Length = 336

 Score = 44.3 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 73/264 (27%), Gaps = 42/264 (15%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHE----SYEQLMKDCMN 138
           F+ KK      E ++   +A R + +    H       +W +       +   L      
Sbjct: 89  FALKKYGFGLHEGLYTNMNAIRKDEDLDNFHSIYVDQWDWEKVIAKEERTEATLKATVRQ 148

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           + +    + ++  + F     +   E  ++T  E   R+           P+        
Sbjct: 149 VFKVIKHMEHEVWYKFPQAVYHLPDEIHFVTTQELEDRW-----------PELSPMERED 197

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++ G          D   R      EP+ G                           
Sbjct: 198 KIAKELG--CVFVMKIGDKLQRSG----EPHDGRAPDYDDWSLNGDIIFWYEPLQTKLEV 251

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
           +                             ++++++         P   D LA   +MP 
Sbjct: 252 SSMG------------------IRVDERAMKEQLEKAHATDRAELPFHRDLLA--GKMPY 291

Query: 319 SSGIAMGFDRLVMLVTGANNINEV 342
           + G  +G  RL ML+ G  ++ EV
Sbjct: 292 TIGGGIGQSRLCMLLLGKAHVGEV 315


>gi|118573261|sp|Q1L6A3|PYLS_METTE RecName: Full=Pyrrolysyl-tRNA synthetase; AltName:
           Full=Pyrrolysine--tRNA ligase; Short=PylRS
 gi|67773309|gb|AAY81923.1| pyrrolysyl-tRNA synthetase [Methanosarcina thermophila]
          Length = 478

 Score = 44.3 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 9/104 (8%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPGNET-HIRAFSTELIIQDHIRKPLYLQT--SPE 83
            ++  + ++FV+  F+EI S  L      E   I            +     L+   +P 
Sbjct: 269 KLEREITKFFVDRGFLEIKSPILIPMEYIERMGIDNDKELSKQIFRVDNNFCLRPMLAPN 328

Query: 84  FS-----CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
                    + L     KIF     +R    G  H  EFTML +
Sbjct: 329 LYNYLRKLNRALPDPI-KIFEIGPCYRKESDGKEHLEEFTMLNF 371


>gi|299783581|gb|ADJ41579.1| Aspartate--ammonia ligase [Lactobacillus fermentum CECT 5716]
          Length = 336

 Score = 44.3 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 73/264 (27%), Gaps = 42/264 (15%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHE----SYEQLMKDCMN 138
           F+ KK      E ++   +A R + +    H       +W +       +   L      
Sbjct: 89  FALKKYGFGLHEGLYTNMNAIRKDEDLDNFHSIYVDQWDWEKVIAKEERTEATLKATVRQ 148

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           + +    + ++  + F     +   E  ++T  E   R+           P+        
Sbjct: 149 VFKVIKHMEHEVWYKFPQAVYHLPDEIHFVTTQELEDRW-----------PELSPMERED 197

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++ G          D   R      EP+ G                           
Sbjct: 198 KIAKELG--CVFVMKIGDKLQRSG----EPHDGRAPDYDDWSLNGDIIFWYEPLQTKLEV 251

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQ 318
           +                             ++++++         P   D LA   +MP 
Sbjct: 252 SSMG------------------IRVDERAMKEQLEKAHATDRAELPFHRDLLA--GKMPY 291

Query: 319 SSGIAMGFDRLVMLVTGANNINEV 342
           + G  +G  RL ML+ G  ++ EV
Sbjct: 292 TIGGGIGQSRLCMLLLGKAHVGEV 315


>gi|14590213|ref|NP_142278.1| histidyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|3915065|sp|O58028|SYH_PYRHO RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|3256679|dbj|BAA29362.1| 431aa long hypothetical histidyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 431

 Score = 44.3 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 40/332 (12%), Positives = 93/332 (28%), Gaps = 33/332 (9%)

Query: 11  NRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS------PGNET--HIRAF 62
             +   +RR    K       +RE F    F EI +  ++Y+       G E    + AF
Sbjct: 12  LPEDMAKRRWVFEK-------IREVFEAYGFKEILTPVMEYTKLFQLRSGEEVVKQLYAF 64

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCF-AHAWRNGEQGCLHQPEFTMLE 121
             +      +R  +    +          A +   + + A+ +R  E       EF    
Sbjct: 65  KDKGGRDVSLRPDMTSSVA-RLYVNSFQMAPKPIKWYYIANMFRYEEPQSGRYREFWQAG 123

Query: 122 WYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANID 181
                    +   + + +   +      + F+    +     E   +          +I 
Sbjct: 124 VELIGSDKVEADAEVIALFVESYLSTGLRDFTVNIGDRILLDEFAGMLGVSD-----DIG 178

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
           L   +D  D+  +       ++ G+  +  +   ++        I+           + +
Sbjct: 179 LMRIIDKRDKLSQEEFINLLKEFGLGESEIEKVLELVE------IKGRPDNVLPLAEELF 232

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKE--MQEKKKIY 299
            + ++               +      I +        D       FE     +      
Sbjct: 233 KSKKAKEEISKLYKLTDLLEWYGVKDWIRIDLGIARGFDYYT-SIVFEAISPNELGIGSI 291

Query: 300 NETYPIDEDFLACLTEMP-QSSGIAMGFDRLV 330
                 D + +      P  ++G A+G +RL+
Sbjct: 292 GGGGRYD-NLIEIFGGKPTPATGFAIGIERLL 322


>gi|119472961|ref|ZP_01614817.1| asparagine synthetase AsnA [Alteromonadales bacterium TW-7]
 gi|119444630|gb|EAW25940.1| asparagine synthetase AsnA [Alteromonadales bacterium TW-7]
          Length = 331

 Score = 43.9 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 37/329 (11%), Positives = 94/329 (28%), Gaps = 41/329 (12%)

Query: 29  QSSLREYFVEN-----QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPL 76
            SS++++F          +E+ +  L               +  A + + I         
Sbjct: 12  ISSVKQFFSRQLEKQLGLVEVQAPILAKVGDGTQDNLSGHENAVAVNVKAIADSQYEVVH 71

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L      +  +   +  E ++    A R  E+             Y     +E+++ + 
Sbjct: 72  SLAKWKRKTLGEYGFSKGEGLYTQMKALRPDEESLSPIHS-----VYVDQWDWEKVICES 126

Query: 137 MNI-IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
               +              +                 +  ++ + +    +  PD   ++
Sbjct: 127 TERSLTTLKRTVESIYKGIKETEQFVSEHFSLDPFLPSDIQFVHSEELRKIY-PDLTAKN 185

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD 255
                A++ G           +    + +   P+         ++Y        +I   +
Sbjct: 186 REKAIAKKYGAVFLIGIG-GQLGDGQIHDVRAPDYDDWSTPTSEQY---IGLNGDILVWN 241

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-- 313
           P     FE+ +  I +                 + +   +    ++   +D      L  
Sbjct: 242 PILEDSFEISSMGIRVSP------------EVLKTQ--LRITGDDDRLQLDWH--KALLK 285

Query: 314 TEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           ++ PQ+ G  +G  RL ML+    +I +V
Sbjct: 286 SQFPQTIGGGIGQSRLAMLLLQKGHIGQV 314


>gi|332796272|ref|YP_004457772.1| phenylalanyl-tRNA synthetase subunit alpha [Acidianus hospitalis
           W1]
 gi|332694007|gb|AEE93474.1| phenylalanyl-tRNA synthetase, alpha subunit [Acidianus hospitalis
           W1]
          Length = 468

 Score = 43.9 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query: 318 QSSGIAMGFDRLVMLVTGANNIN 340
            +    +G DRL ML  G  +I 
Sbjct: 429 PAGAWGLGLDRLAMLFLGIKDIR 451


>gi|256370902|ref|YP_003108726.1| Histidine--tRNA ligase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007486|gb|ACU53053.1| Histidine--tRNA ligase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 425

 Score = 43.9 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 44/353 (12%), Positives = 91/353 (25%), Gaps = 65/353 (18%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNETHIRAFST---- 64
           R  L      R+   S +R  +  + F+EI++        L  S   E     F      
Sbjct: 11  RDILPGEHEVRSAAASVIRSTYRSHGFLEIETPIVETLEALAASGAGENAKLMFKVLKRG 70

Query: 65  -----------ELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLH 113
                      + ++   +R  L +  +  ++  +              A+R        
Sbjct: 71  ERLDLGSASSPDDLVDAGLRFDLTVPLARFYAVNQSKLPKPFLAMQIGPAFRAERPQRGR 130

Query: 114 QPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCN-PFSEPEYITVAE 172
             +F   +     E+      + +     A      + F     +        E + V  
Sbjct: 131 LRQFVQADADILGEASWLAEVELLIAATAALHQLGLEGFELHVNDRRAVEHVLERLEVPA 190

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
              R   + L      P    R+ +        +      T  DI        +   L +
Sbjct: 191 DHWRSVLVALDKLDKEPPIAVRNEMVGAGLGEELADHVLATLGDIVENEHPLDVLETLDV 250

Query: 233 NCCTILDRYPAPESALANIYPA------------DPRFTKRFELYACNIELCNACDELLD 280
           +   +   +        ++               D   +  FE+   +           D
Sbjct: 251 DASVLESLHAIATHVRTSVRDTEVVIDPLIVRGLDYYSSSVFEIVHPHWSSSIGGGGRYD 310

Query: 281 PIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLV 333
                 RF                +DE           + GI++GF+R++ L+
Sbjct: 311 G--LLARF---------------GVDE----------PACGISLGFERILSLL 336


>gi|184156078|ref|YP_001844418.1| asparagine synthetase AsnA [Lactobacillus fermentum IFO 3956]
 gi|226729509|sp|B2GE56|ASNA_LACF3 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|183227422|dbj|BAG27938.1| aspartate-ammonia ligase [Lactobacillus fermentum IFO 3956]
          Length = 336

 Score = 43.9 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 69/260 (26%), Gaps = 34/260 (13%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
           F+ KK      E ++   +A R + +    H       +W +     E+        +R 
Sbjct: 89  FALKKYGFGLHEGLYTNMNAIRKDEDLDNFHSIYVDQWDWEKVIAKEERTEATLKATVRQ 148

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
             +V        +++    + +            +     G     P+          A+
Sbjct: 149 VFKVI-------KHMEHEVWYKFPQAVYHLPDEIHFVTTQGLEDRWPELSPMEREDKIAK 201

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G          D   R      EP+ G                           +   
Sbjct: 202 ELG--CVFVMKIGDKLQRSG----EPHDGRAPDYDDWSLNGDIIFWYEPLQTKLEVSSMG 255

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGI 322
                                     ++++++         P   D LA   +MP + G 
Sbjct: 256 ------------------IRVDERAMKEQLEKAHATDRAELPFHRDLLA--GKMPYTIGG 295

Query: 323 AMGFDRLVMLVTGANNINEV 342
            +G  RL ML+ G  ++ EV
Sbjct: 296 GIGQSRLCMLLLGKAHVGEV 315


>gi|269140862|ref|YP_003297563.1| asparagine synthetase A [Edwardsiella tarda EIB202]
 gi|267986523|gb|ACY86352.1| asparagine synthetase A [Edwardsiella tarda EIB202]
 gi|304560620|gb|ADM43284.1| Aspartate--ammonia ligase [Edwardsiella tarda FL6-60]
          Length = 330

 Score = 43.5 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 87/321 (27%), Gaps = 44/321 (13%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHI--RAFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             +    IE+ +  L     G + ++     + ++ +++  ++   +  S     +K L 
Sbjct: 23  LEQRLGLIEVQAPILSRLGDGTQDNLSGHEKAVQVKVKNLPQETFEVVHSLAKWKRKTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        +H       +W R     E+        +R    
Sbjct: 83  MYDFAPGEGLYTHMKALRPDEDRLSAIHSVYVDQWDWERVMGDGERTPTYLQETVRHIYA 142

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                              P  I    +                    R L  +     G
Sbjct: 143 AMKTTEAEVCAQYGLTPFLPAEIHFVHSETLLRRYPDLDAKGRERAITRELGAVFLIGIG 202

Query: 206 IRVAHD---DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
            R+++    D  +  +        E   G+N   ++                +P     F
Sbjct: 203 GRLSNGQAHDVRAPDYDDWTSLGAEGFGGLNGDILVW---------------NPVLGDAF 247

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSG 321
           EL +  I                   ++++              +  L      MPQ+ G
Sbjct: 248 ELSSMGIR------------VDAKALKRQLALTDDEDRLALEWHQSLLR---GEMPQTIG 292

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  RLVML+    +I +V
Sbjct: 293 GGIGQSRLVMLLLQQQHIGQV 313


>gi|296090491|emb|CBI40822.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score = 43.5 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 31/102 (30%), Gaps = 25/102 (24%)

Query: 3   QIPSQPWWNRD----FHYRRRPFLL---KR--NMIQSSLREYFVENQFIEIDSMSLQYS- 52
            +P      +      H+R R  ++    R  N +  +   +F  + F+   +  +  S 
Sbjct: 100 PLPKTRLTLKFLRVFVHFRSRTNMIPAVARICNALAYATHTFFQNHGFLHAHTPIITTSD 159

Query: 53  PGNETHIRAFSTELIIQDH-------------IRKPLYLQTS 81
                 +  F    +I D                +  +++ +
Sbjct: 160 CEGAGEM--FRVTTLISDAEKPGIPQKDGKIDYSQDFFVRQA 199


>gi|227872751|ref|ZP_03991074.1| histidine--tRNA ligase [Oribacterium sinus F0268]
 gi|227841412|gb|EEJ51719.1| histidine--tRNA ligase [Oribacterium sinus F0268]
          Length = 420

 Score = 43.5 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 55/197 (27%), Gaps = 25/197 (12%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNETHIRAFSTELIIQD--- 70
             +  R  I S++R  +    F EI++        L    G +     F  E   +    
Sbjct: 17  EEMAIRQRILSAIRRVYGRFGFTEIETPIVEHLENLLSKQGGDNEKLIFKVEKRGEKLKE 76

Query: 71  -------------HIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEF 117
                         +R  L L  S  ++  +       K       +R          EF
Sbjct: 77  AIEKGDFEALSDAGLRYDLTLPLSRFYAENQAKLPSPFKALQIGPVFRADRPQKGRFREF 136

Query: 118 TMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
              +          L    ++++     +  +  F  Q       ++ E +   + +A +
Sbjct: 137 WQCDI-DIFGDSSFLS--EIDLLLAMGTLLQEIGFGEQYPFYIVVNDREILKAMQRYAGF 193

Query: 178 ANIDLGTTLDNPDQPDR 194
              D        D+ D+
Sbjct: 194 PEGDFEQISIILDKEDK 210


>gi|257439881|ref|ZP_05615636.1| aspartyl-tRNA synthetase [Faecalibacterium prausnitzii A2-165]
 gi|257197694|gb|EEU95978.1| aspartyl-tRNA synthetase [Faecalibacterium prausnitzii A2-165]
          Length = 179

 Score = 43.5 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 5/27 (18%), Positives = 16/27 (59%)

Query: 21  FLLKRNMIQSSLREYFVENQFIEIDSM 47
               ++ + +++R++ ++  FIEI + 
Sbjct: 142 MFKAQSCMVNAMRKFLLDQNFIEIHTP 168


>gi|297846508|ref|XP_002891135.1| hypothetical protein ARALYDRAFT_891103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336977|gb|EFH67394.1| hypothetical protein ARALYDRAFT_891103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 166

 Score = 43.5 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 10/64 (15%)

Query: 30  SSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCK 87
             +RE  +   F+ I +  L    S G     R         ++  +P  L  SP+   +
Sbjct: 52  QCVRENLLSKDFVNIHTPKLLAGSSEGGSAVFR--------LEYQGQPACLAQSPQLHKQ 103

Query: 88  KLLA 91
             + 
Sbjct: 104 MTIC 107


>gi|320536997|ref|ZP_08036978.1| histidyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146147|gb|EFW37782.1| histidyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 442

 Score = 43.1 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 18/162 (11%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSM------SLQYSPGNETHIRAFS-TELI 67
           R FL    ++R ++   L E F E  F+ ID+        L    G ET  + F  T+  
Sbjct: 14  RDFLPEAEIRRALLIEKLTEVFREAGFVPIDTPALEYSDVLLRKSGGETEKQVFRFTDNG 73

Query: 68  IQD-HIRKPL---YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
            +D  +R  L   + +   E   +        K +  A  WR  +       EF   ++ 
Sbjct: 74  GRDVALRFDLTVPFARFVAEHYSQLYFPF---KRYHIAKVWRGEKPQAGRFREFVQCDFD 130

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
                      + + ++R + +            +   F+  
Sbjct: 131 IVGSDAACTDFEILKLMRQSLKAIGVDKILIHVSHRAIFNRF 172


>gi|322705386|gb|EFY96972.1| asparaginase like 1 [Metarhizium anisopliae ARSEF 23]
          Length = 386

 Score = 43.1 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 73/286 (25%), Gaps = 28/286 (9%)

Query: 73  RKPLYLQTSPEFSCKKLL--AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
            +  YL  S +F  +  L      +  +    + R  +    H  +F  +E         
Sbjct: 114 GEDTYLADSQQFLLEYALRYNDKAQGAYYVGTSCRGEDHDSTHLNQFCHVECELRGG--- 170

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
                    +     VA  +    ++ +           + +    +A           D
Sbjct: 171 ---LGAGMDVANRYIVAVTEELLRRHGDAIKAQAGSTQHMTDLLQLFARNGNKFPTITLD 227

Query: 191 QPDRHLLYLQAQQAGIR--VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
           +  R     + +       VA          R   + +    G  C  +   +       
Sbjct: 228 EALRLPEMQKGEGTMWEYTVAGRPECGRSLKRKGEQALVARFGGACWVVEMDH-LGVPFY 286

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
                A  +     +L     E+    +            E     K+   +        
Sbjct: 287 QAYTDATAKKALCGDLLLGLGEVVGCGNRHTTAD------EALAALKQHDVDPACY--AW 338

Query: 309 FLA-----CLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPFSQ 349
           ++       L     ++G  +G +R +  V   +++ +V   P  +
Sbjct: 339 YIEMRKFKAL----NTTGWGIGSERFLSWVLQHDDVRDVQLLPRLK 380


>gi|119720736|ref|YP_921231.1| asparagine synthetase A [Thermofilum pendens Hrk 5]
 gi|119525856|gb|ABL79228.1| aspartate-ammonia ligase [Thermofilum pendens Hrk 5]
          Length = 323

 Score = 43.1 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 103/337 (30%), Gaps = 56/337 (16%)

Query: 18  RRPFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQ-DHIRKPL 76
           +R          S L  Y VE  F  +  +    S         FS E  I+ +   + +
Sbjct: 28  KRSIARITTYTLSFLSRYLVERGFDWVLPVVFSKSTDPLWPDPDFSIEKRIEVEIYGETV 87

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE----QGCLHQPEFTMLEWYRAHESYEQL 132
               S     + L++    KIF F+   R          +H  EFT L++     S   +
Sbjct: 88  RSTQSMIVHKQVLVSLLSPKIFVFSPNVRIETRKRASTGIHAYEFTQLDFEVRGASSSYI 147

Query: 133 MKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQP 192
                ++++       +++                    E    +   +L   +      
Sbjct: 148 RSLVEDMLKSYVSSLKREM--------------------EHELSFLGSELPEIMTPFKVV 187

Query: 193 DRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           D   L             ++   +  + +     EP   +N       +  PE+      
Sbjct: 188 DSKEL------------EEEYGKEWQTSLRSTLKEPVWVVNIPREFYDFEDPETGRW--- 232

Query: 253 PADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA 311
                    ++LY   + E+ +      +  +   + +     +  +  E Y +  D   
Sbjct: 233 -------DNYDLYVPRVGEILSGARREYEYEKILSKMK-----RDGVRPENYRVLLDL-- 278

Query: 312 CLTE-MPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
                +  S+G  +G +RL++ VTG  +I  V   P 
Sbjct: 279 AREGRLLPSAGAGIGVERLLLWVTGVRHIGIVQPFPR 315


>gi|296081454|emb|CBI14779.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score = 43.1 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 21/54 (38%), Gaps = 6/54 (11%)

Query: 4   IPSQPWWNRDFHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
           +P     +   H++ R       +  R+ +  +   +F  N+F+ +    +  +
Sbjct: 49  LPIDSLRDFS-HFKPRTTTVASVMRMRDALTHATHNFFRNNEFLYVQVPIITTT 101


>gi|297808573|ref|XP_002872170.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318007|gb|EFH48429.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 428

 Score = 43.1 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 10/155 (6%)

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGE-QGCLHQPEFTMLEWYRAHES 128
           D   +  +L  S +   +    +    ++ F   +R  +     H  EF M+E   A   
Sbjct: 275 DFFARQAFLTVSGQLHAETYACS-MGDVYTFGPTFRAEKSHTSRHLAEFWMVEVELAFAG 333

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
            E+ M     +++       +K         +   +     V +A      +   T    
Sbjct: 334 VEEAMNCAEALVKDICNSLLEKC--------DDDMKLMAKNVDKACIDRLLLVASTGFGR 385

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILI 223
               +   L  +A   G +  +   W    +    
Sbjct: 386 VTYTEAITLLEKAVAQGKKFENQVEWGIDLASEHE 420


>gi|156938014|ref|YP_001435810.1| phenylalanyl-tRNA synthetase, alpha subunit [Ignicoccus hospitalis
           KIN4/I]
 gi|156566998|gb|ABU82403.1| phenylalanyl-tRNA synthetase, alpha subunit [Ignicoccus hospitalis
           KIN4/I]
          Length = 478

 Score = 43.1 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
             +G DRL ML  G ++I +
Sbjct: 434 WGIGIDRLAMLALGLSDIRD 453


>gi|324111643|gb|EGC05624.1| aspartate-ammonia ligase [Escherichia fergusonii B253]
 gi|325499550|gb|EGC97409.1| asparagine synthetase AsnA [Escherichia fergusonii ECD227]
          Length = 330

 Score = 42.7 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSVGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   +D      L    
Sbjct: 243 LEDAFELSSMGIR------------VDAETLKHQLAL--TGDEDRLQLDWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|218551278|ref|YP_002385070.1| asparagine synthetase AsnA [Escherichia fergusonii ATCC 35469]
 gi|226729507|sp|B7LK89|ASNA_ESCF3 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|218358820|emb|CAQ91477.1| asparagine synthetase A [Escherichia fergusonii ATCC 35469]
          Length = 330

 Score = 42.7 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   +D      L    
Sbjct: 243 LEDAFELSSMGIR------------VDAETLKHQLAL--TGDEDRLQLDWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|15921705|ref|NP_377374.1| phenylalanyl-tRNA synthetase subunit alpha [Sulfolobus tokodaii
           str. 7]
 gi|24212456|sp|Q971D7|SYFA_SULTO RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|15622492|dbj|BAB66483.1| 469aa long hypothetical phenylalanyl-tRNA synthetase alpha subunit
           [Sulfolobus tokodaii str. 7]
          Length = 469

 Score = 42.7 bits (99), Expect = 0.087,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%)

Query: 320 SG-IAMGFDRLVMLVTGANNIN 340
           +G   +G DRL ML+ G  +I 
Sbjct: 427 AGAWGLGIDRLAMLLLGLKDIR 448


>gi|288560504|ref|YP_003423990.1| histidyl-tRNA synthetase HisS [Methanobrevibacter ruminantium M1]
 gi|288543214|gb|ADC47098.1| histidyl-tRNA synthetase HisS [Methanobrevibacter ruminantium M1]
          Length = 433

 Score = 42.7 bits (99), Expect = 0.090,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 108/342 (31%), Gaps = 38/342 (11%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-----LQYSPGNETHIR 60
            +P   RDF +     + +R M + +LR  F    F E+ +       L  +   E    
Sbjct: 4   ERPRGTRDFLF---EEMRERKMAEDTLRNVFENYGFGEVQTPLFEDLKLFTTKSGEE--- 57

Query: 61  AFSTELIIQDHIRKPLYLQTSPE-------FSCKKLL-AAGEEKIFCFAHAWRNGEQGCL 112
               + +     +    L   PE           +L   +   KI+ +   +R       
Sbjct: 58  --IVDQLYNFKDKGDRDLALRPEITAPIARLYLNELQKTSKPIKIYYYGSCFRYERPQKG 115

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
              +F             +   + + +   A E        F            ++ +  
Sbjct: 116 RFRQFWQFGCELIGAKTPEGEAEVIAMCNNAIEELGITTAEFNVN---------HLGIIR 166

Query: 173 AFARYANIDLGTTLDNP---DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
               + +ID  T  +     D+ D+ LL          +      +++  +++    + +
Sbjct: 167 GLFAHFDIDTATQREIMVVIDKGDKDLLKDSLVGENPIIKDKPELNEVLFKLMDMVGDSS 226

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFE 289
           +  +   ++  Y          +    +  + F+++   + L  A             + 
Sbjct: 227 IIKDIEELVAPY-EETQEALEEFKELVKTLESFQVFNYKLNLGVARGLDYYTGIVFEVYV 285

Query: 290 KEM-QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLV 330
           + +  +K+     TY + + F     ++  + G A+GFDRL+
Sbjct: 286 EGLGAQKQVCGGGTYNLVKLFGG--EDVVST-GFALGFDRLM 324


>gi|270264082|ref|ZP_06192349.1| aspartate--ammonia ligase [Serratia odorifera 4Rx13]
 gi|270041731|gb|EFA14828.1| aspartate--ammonia ligase [Serratia odorifera 4Rx13]
          Length = 330

 Score = 42.7 bits (99), Expect = 0.092,   Method: Composition-based stats.
 Identities = 47/327 (14%), Positives = 90/327 (27%), Gaps = 48/327 (14%)

Query: 34  EYFVEN-----QFIEIDSMSLQYSP-GNETHIRAFS--TELIIQDHIRKPLYLQTSPEFS 85
            +F          IE+ +  L     G + ++       ++ ++        +  S    
Sbjct: 17  SFFSRQLEQQLGLIEVQAPILSRLGDGTQDNLSGSEKAVQVKVKTLPDATFEVVHSLAKW 76

Query: 86  CKKLLAAG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +K L +      E ++    A R        +H       +W R     E+      + 
Sbjct: 77  KRKTLGSYDFGAGEGLYTHMKALRPDEDRLSAIHSVYVDQWDWERVMGDGERSQHYLQST 136

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +R                       PE I    +                    + L  +
Sbjct: 137 VRSIYAAIKATEAEVSREYGLTPFLPEQIHFVHSETLLQRYPELDAKGRERAIAKELGAV 196

Query: 200 QAQQAGIRVAHD---DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                G +++H    D  +  +        E   G+N   ++                +P
Sbjct: 197 FLIGIGGKLSHGKSHDVRAPDYDDWTTPAAEGLAGLNGDIVVW---------------NP 241

Query: 257 RFTKRFELYACNIEL-CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE 315
                FEL +  I +   A    L       R + E  +     +               
Sbjct: 242 ILQDAFELSSMGIRVDAEALKRQLSLTGDEDRLKLEWHQSLLRGD--------------- 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RLVML+   ++I +V
Sbjct: 287 MPQTIGGGIGQSRLVMLLLQLSHIGQV 313


>gi|253987531|ref|YP_003038887.1| asparagine synthetase AsnA [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253778981|emb|CAQ82141.1| asparagine synthetase A [Photorhabdus asymbiotica]
          Length = 356

 Score = 42.7 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 43/328 (13%), Positives = 90/328 (27%), Gaps = 40/328 (12%)

Query: 29  QSSLREYFV-----ENQFIEIDSMSL-------QYSPGNETHIRAFSTELIIQDHIRKPL 76
            S ++ +F      +   IE+    L       Q +            + +         
Sbjct: 38  ISFVKSFFSRLLESKLGLIEVQGPMLSCLGDGIQDNLSGHEKAVQVKVKTLPDSTFEVVH 97

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L      +  +     E+ ++    A R  E              Y     +E++M D 
Sbjct: 98  SLAKWKRKTLGRFDFQPEQGLYTHMKALRPDEDRLTPIHS-----VYVDQWDWEKVMGDG 152

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +    +   +   + +        E            + + +   +   P+   +  
Sbjct: 153 QRSLAYLKQTVGKIYEAIKETEKAVSKEFGLAPFLPDQIHFVHSEALLSRY-PELDAKGR 211

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
               A++ G         + +      +   P+         D +        +I   +P
Sbjct: 212 ERAIAKELGAVFLIGIG-AKLSDGQSHDVRAPDYDDWTTPNSDGF---AGLNGDIIVWNP 267

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
                FE+ +  I +  A              E+++        +    D      L   
Sbjct: 268 VLEDAFEISSMGIRVDAAT------------LERQLSL--TGDEDRLQYDWH--QALLKG 311

Query: 316 -MPQSSGIAMGFDRLVMLVTGANNINEV 342
            MPQS G  +G  RLVML+    +I +V
Sbjct: 312 DMPQSIGGGIGQSRLVMLLLQMKHIGQV 339


>gi|296109164|ref|YP_003616113.1| histidyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295433978|gb|ADG13149.1| histidyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 406

 Score = 42.7 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 63/339 (18%), Positives = 106/339 (31%), Gaps = 41/339 (12%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-----LQYSPGNET--- 57
           S+P   RDF       + KR  ++  LRE F    + EI + +     L      E    
Sbjct: 3   SKPRGTRDFTP---EEMKKRRYVEKKLREVFESYGYEEILTPTFESFELIAKKTGEEIRK 59

Query: 58  HIRAFSTELIIQDHIRKPLYLQTSP--EFSCKKLLAAGEE-KIFCFAHAWRNGEQGCLHQ 114
            +  F      +  +R  +   TSP   F   +L    +  +++ FA+ +R         
Sbjct: 60  QLYVFKDHGGRELSLRPEM---TSPVVRFYLNELKNYPKPLRLYYFANCFRYERPQAGRF 116

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAF 174
            EF  +                       AEV N  I   +N++     E  ++ V    
Sbjct: 117 REFWQMGCELIG----------CKREVADAEVINLAIDGLKNIDVEFSLEIGHLGVLRGI 166

Query: 175 ARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINC 234
            R   +     +      D+   Y    +    +  D    D+   IL  K    +    
Sbjct: 167 LRKFKVGEEEEVKIRRLIDKE-DYESLDKYLTEIL-DKEKRDLIFNILELKGGKEILEEA 224

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCN-ACDELLDPIEQRHRFEKEMQ 293
             +L  +P    A+        R  +    Y  +    N      LD       FE   +
Sbjct: 225 KELLKDFPESLEAV--------RNLENILKYTYDNYKINFGIARGLDYYTGM-VFEIYGK 275

Query: 294 EKKKIYNETYPIDEDFLACLTEMP-QSSGIAMGFDRLVM 331
           +  K        D + +      P  + G A GFDR++M
Sbjct: 276 KGAKQICGGGRYD-NLIETFGGEPEPAVGFAYGFDRIMM 313


>gi|315650237|ref|ZP_07903310.1| aspartate-ammonia ligase [Eubacterium saburreum DSM 3986]
 gi|315487482|gb|EFU77791.1| aspartate-ammonia ligase [Eubacterium saburreum DSM 3986]
          Length = 335

 Score = 42.3 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/340 (11%), Positives = 84/340 (24%), Gaps = 53/340 (15%)

Query: 20  PFLLKRN--MIQSSLREYFVENQF-----IE-IDSMSLQYSPGN---ETHIRAFSTELII 68
           P L  R        +R+ F +  F     +E + +              +         I
Sbjct: 11  PILSVRQTQEAIKYIRDTFQKE-FGKEMNLERVSAPLFVSKSSGLNDNLNGVERPVSFDI 69

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAG-----EEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
            +   +   +  S     +  L        E          R+ E   LH       +W 
Sbjct: 70  LNIPNEEYEVVQSLAKWKRMALGEYNFAPGEGLYTNMNAIRRDEELDNLHSCYVDQWDWE 129

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           +     ++ ++     ++        K+                  + +      + +L 
Sbjct: 130 KVIRKEDRTIEVLEETVKIIF-----KVIKHMEHEVWYKYPQAVKHLPDDIFFITSEELR 184

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPA 243
               + +  +R  L  +                         +E   G+           
Sbjct: 185 KMYQDKEPKERENLITK-------------------EHGCVFVEKIGGVLGDGKPHD--- 222

Query: 244 PESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                      D        L+      C      +         E ++++   +  +  
Sbjct: 223 -----GRAPDYDDWELNGDILFWFENLNCALEISSMGIRVDEAAMESQLKKANALDRKNL 277

Query: 304 PIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
           P  +  LA     +P + G  +G  RL ML+    ++ EV
Sbjct: 278 PFHKSLLA---GELPYTIGGGIGQSRLCMLLLNKAHVGEV 314


>gi|330834029|ref|YP_004408757.1| phenylalanyl-tRNA synthetase subunit alpha [Metallosphaera cuprina
           Ar-4]
 gi|329566168|gb|AEB94273.1| phenylalanyl-tRNA synthetase subunit alpha [Metallosphaera cuprina
           Ar-4]
          Length = 466

 Score = 42.3 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 7/24 (29%), Positives = 11/24 (45%)

Query: 318 QSSGIAMGFDRLVMLVTGANNINE 341
            +    +G DRL M   G  +I +
Sbjct: 428 PAGAWGIGIDRLAMSFLGVQDIRD 451


>gi|257456490|ref|ZP_05621686.1| histidyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257446150|gb|EEV21197.1| histidyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 438

 Score = 41.9 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 55/163 (33%), Gaps = 20/163 (12%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQYSPG------NETHIRAFSTELII 68
           R FL    ++R ++  ++   F    F+ ID+ +L+YS         ET  + F      
Sbjct: 11  RDFLPRDEIRRALLIETVTNVFRNAGFVPIDTPALEYSEVLLRKSNGETEKQVFR----F 66

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC------FAHAWRNGEQGCLHQPEFTMLEW 122
            D+  + + L+        + +A    +++        A  WR  +       EF   ++
Sbjct: 67  NDNGGRDIALRFDLTVPFARFIAEHYSELYFPFKRYHIAKVWRGEKPQAGRYREFIQCDF 126

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
                       + + ++  A +      F     +   F+  
Sbjct: 127 DSVGSDCAYTDFEILKVMYSALKALGVTNFRIHISHRGIFNRF 169


>gi|324531834|gb|ADY49190.1| Asparaginyl-tRNA synthetase [Ascaris suum]
          Length = 194

 Score = 41.9 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 57/213 (26%), Gaps = 33/213 (15%)

Query: 119 MLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYA 178
           MLE   A       +   +           ++  S  +              +++F    
Sbjct: 1   MLEAEFAFVDDLNELCVLVERFIRFVLSELKRSPSCLSDFEKIKGIFCENDSSDSFMIAK 60

Query: 179 NIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTIL 238
             +    +   D           ++ G  V+               +            +
Sbjct: 61  FPEQLPRICYED------AVEVLRRKGEMVSGSFNKKQELELFAYCR--------SPLFV 106

Query: 239 DRYPAPESALANIYPADPRFTKRFELYACNI-ELCNACDELLDPIEQRHRFEKEMQEKKK 297
             +P+ +        +D R+ + F+L A  + EL        D            + + +
Sbjct: 107 TYFPSSQKPFYMSRTSDDRYAECFDLIAPYVGELAGGSLRETDAD----------KLRAR 156

Query: 298 IYNET--YPIDEDFLACLTEMPQSSGIAMGFDR 328
              E   + +D   L   +  P ++G   G +R
Sbjct: 157 GCGEALKWYVD---LRS-SGHPPTAGF--GIER 183


>gi|38569901|gb|AAR24471.1| predicted threonyl-tRNA synthetase [uncultured crenarchaeote
           DeepAnt-EC39]
          Length = 616

 Score = 41.9 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 54/156 (34%), Gaps = 24/156 (15%)

Query: 23  LKRNMIQSS----LREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPL 76
           L ++ I+      +R Y      IE+++  +   + P  E++   F       D   K L
Sbjct: 227 LIKSQIEQYVTDKIRNY----GGIEVETPIMYDSHHPSMESYFNRFPARQYSIDSEGKHL 282

Query: 77  YLQTSPEFSCKKLLAAGEEKIFC---------FAHAWRNGEQGC----LHQPEFTMLEWY 123
           +L+ +     + L+A+  +  +            +++R  + G          FTM + +
Sbjct: 283 FLRFAAC-FGQFLMASDFQLSYKNLPYKLYELTRYSFRREQSGELVGLRRLRAFTMPDCH 341

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              +   Q + +       + EV +       +   
Sbjct: 342 AFCKDMSQAIDEFRKRFDLSREVLSGLGIEENDYEV 377


>gi|328948006|ref|YP_004365343.1| histidyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328448330|gb|AEB14046.1| Histidyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 433

 Score = 41.9 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 52/162 (32%), Gaps = 18/162 (11%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSMSLQYS------PGNETHIRAFSTELII 68
           R FL    + R+ +   L + F    F+ ID+  L+Y+         ET  + F  E   
Sbjct: 14  RDFLPQDEILRSDLIEKLTKTFRSYGFVPIDTPVLEYTEILLRKSNGETEKQMFRFEDNG 73

Query: 69  QDHIRKPL-----YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
              +         + + + +   K+ L    ++    +  WR  +       EF   ++ 
Sbjct: 74  GRDVAMRFDLTVPFARFTAQ--HKEELYFPFKRYH-ISKVWRGEKPQVGRYREFVQCDFD 130

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
                      + +++++ A              +   F+  
Sbjct: 131 TVGSDSAVSDFETLSLMKAALSAIGVDEIKIHVNHRGIFNRF 172


>gi|297827925|ref|XP_002881845.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297847294|ref|XP_002891528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297327684|gb|EFH58104.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337370|gb|EFH67787.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 106

 Score = 41.9 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 10/62 (16%)

Query: 32 LREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
           RE  +   F+ I +  L    S G     R         ++  +P  L  SP+   +  
Sbjct: 2  FRENLLSKDFVNIHTPKLLAGSSEGGSAVFR--------LEYQGQPACLAQSPQLHKQMT 53

Query: 90 LA 91
          + 
Sbjct: 54 IY 55


>gi|299143683|ref|ZP_07036763.1| histidine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518168|gb|EFI41907.1| histidine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 437

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 56/205 (27%), Gaps = 20/205 (9%)

Query: 26  NMIQSSLREYFVENQFIEIDSM------SLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           N +  ++R+ F ++ F+ ID+        L    G ET       ++         + L+
Sbjct: 25  NEMMDTIRKNFEKHGFLPIDTPAIEKSEVLLAKGGGETE-----KQIYRFTKGDTDMSLR 79

Query: 80  TSPEFSCKKLLAAGEEKI------FCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
                   +        +      +     +R  +       EF   +          ++
Sbjct: 80  FDLTVPLARYTVEHFNDLSFPFRRYHIGKVYRGEKAQKGRFREFYQCDIDTIGNEKLDIL 139

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
            D    +         K   F +      +        E+     ++D+   +D  D+  
Sbjct: 140 NDAEFPVVIYHTF---KDLGFDDFTIRINNRKILKGFFESLNILDSVDVLRAVDKIDKIG 196

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIF 218
           R  +  +    GI         D  
Sbjct: 197 REKVKEELCDNGIEEDIAVKIIDFI 221


>gi|315122645|ref|YP_004063134.1| histidyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496047|gb|ADR52646.1| histidyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 495

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 50/146 (34%), Gaps = 10/146 (6%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHI----RAFSTELIIQDHIRKP 75
             +  RN I  ++R+ +    F  I++  L+YS      +    R       +QD   + 
Sbjct: 21  EEIRIRNKILDAIRDIYERYGFDPIETPLLEYSDALGKFLPDEDRPNQGVFSLQDDDSQW 80

Query: 76  LYLQTSPEFSCKKLLAAGEE------KIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
           + L+        + +A   +      + +     +RN + G     +F   +      S 
Sbjct: 81  ISLRYDLTAPLARHVAEHCDTIVFPYRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSK 140

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQ 155
           E    +   ++    E A  K   +Q
Sbjct: 141 ETADAEMCMMMADTLEYAGIKRNDYQ 166


>gi|297526562|ref|YP_003668586.1| transcriptional regulator, MarR family [Staphylothermus hellenicus
           DSM 12710]
 gi|297255478|gb|ADI31687.1| transcriptional regulator, MarR family [Staphylothermus hellenicus
           DSM 12710]
          Length = 519

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 2/24 (8%)

Query: 322 IAMGFDRLVMLVTGANNINEVIWT 345
             +G DRL M V G ++I +    
Sbjct: 464 WGIGIDRLAMAVLGLDDIRD--LF 485


>gi|332532741|ref|ZP_08408615.1| aspartate--ammonia ligase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037768|gb|EGI74218.1| aspartate--ammonia ligase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 331

 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 88/328 (26%), Gaps = 39/328 (11%)

Query: 29  QSSLREYFVEN-----QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPL 76
            S ++++F +        +E+ +  L               +  A + + I         
Sbjct: 12  ISKVKQFFSQQLETQLGLVEVQAPILAKVGDGTQDNLSGHENAVAVNVKAITDSRYEVVH 71

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L      +         E I+    A R  E              Y     +E+++ + 
Sbjct: 72  SLAKWKRKTLATYGFGVGEGIYTQMKALRPDEDSLSPIHS-----VYVDQWDWEKVINET 126

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
                   +   Q I+          SE   +T                   PD   +  
Sbjct: 127 TERSLATLKQTVQSIYKGIKETEAFVSESYGLTPFLPGDIKFVHSEELRKMYPDFSAKQR 186

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
               AQ+ G           +    + +   P+         D+Y        +I   +P
Sbjct: 187 EKAIAQEYGAVFLIGIG-GALGDGKIHDVRAPDYDDWSTPTCDQY---MGLNGDILVWNP 242

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--T 314
                FE+ +  I +                 + +   +     +    D      L  +
Sbjct: 243 VLEDAFEISSMGIRVSP------------EVLKAQ--LRVTGDEDRLEFDWH--KALLQS 286

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           + PQ+ G  +G  RL ML+    +I +V
Sbjct: 287 KFPQTIGGGIGQSRLAMLLLQKQHIGQV 314


>gi|300721126|ref|YP_003710394.1| asparagine synthetase A [Xenorhabdus nematophila ATCC 19061]
 gi|297627611|emb|CBJ88130.1| asparagine synthetase A [Xenorhabdus nematophila ATCC 19061]
          Length = 330

 Score = 41.6 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 41/328 (12%), Positives = 86/328 (26%), Gaps = 40/328 (12%)

Query: 29  QSSLREYFV-----ENQFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPL 76
            S ++ YF      +   IE+    L                      + +         
Sbjct: 12  ISFVKSYFSRLLEKQLGLIEVQGPILSRLGDGTQDNLSGHEKAVQVKVKTLPDATFEVVH 71

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L      +  +     E+ ++    A R  E          + +W      +E+ M + 
Sbjct: 72  SLAKWKRKTLGRFGFQAEQGLYTHMKALRPDEDRLTPIHSVFVDQW-----DWEKTMGEG 126

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +    +   +   + +        E            + + +       PD   +  
Sbjct: 127 QRSLDYLKQTVGKIYEAIKETQQAVSKEFGLAPFLPDQIHFIHSEELLKRY-PDLDAKGR 185

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
               A++ G           +      +   P+         D +        +I   +P
Sbjct: 186 EREAAKEFGAIFLMGIG-GKLSDDQSHDVRAPDYDDWTSPNSDGF---FGLNGDIIVWNP 241

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
                FE+ +  I                   +++++       +    D      L   
Sbjct: 242 VLQDAFEISSMGIR------------VDAEALQRQLEL--TGDEDRLQYDWH--QALVKG 285

Query: 316 -MPQSSGIAMGFDRLVMLVTGANNINEV 342
            MPQS G  +G  RLVML+    +I +V
Sbjct: 286 DMPQSIGGGIGQSRLVMLMLQMPHIGQV 313


>gi|167947572|ref|ZP_02534646.1| fold recognizing lysyl-tRNA [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 96

 Score = 41.6 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 33/55 (60%)

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNII 140
            K+LLAAG   I+     +R+GE G  H PEFT+LEWYR    + QLM +   ++
Sbjct: 1   MKRLLAAGSGPIYEICKVFRDGELGRRHNPEFTLLEWYRPGFDHRQLMGEVAELV 55


>gi|163744570|ref|ZP_02151930.1| ATP phosphoribosyltransferase regulatory subunit [Oceanibulbus
           indolifex HEL-45]
 gi|161381388|gb|EDQ05797.1| ATP phosphoribosyltransferase regulatory subunit [Oceanibulbus
           indolifex HEL-45]
          Length = 360

 Score = 41.6 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 34/112 (30%), Gaps = 16/112 (14%)

Query: 24  KRNMIQS---SLREYFVENQFIEIDSMSLQYS------PGNETHIRAFSTELIIQDHIRK 74
            R+   +   SLR  F     + ++   LQ +       G +   RA+ T     D +R 
Sbjct: 3   TRSETLARAASLRAIFDAQGAVLVEPPILQPADTLLDLYGEDIRARAYVT----SDALRG 58

Query: 75  PLYLQTS---PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
              L+     P         A   +       +R  E       E+  + + 
Sbjct: 59  EQMLRPDFTVPVVQMHMAHGAEPARYTYSGEVFRRQEHDPNRANEYIQVGFE 110


>gi|22123925|ref|NP_667348.1| asparagine synthetase AsnA [Yersinia pestis KIM 10]
 gi|45439868|ref|NP_991407.1| asparagine synthetase AsnA [Yersinia pestis biovar Microtus str.
           91001]
 gi|51594362|ref|YP_068553.1| asparagine synthetase AsnA [Yersinia pseudotuberculosis IP 32953]
 gi|108806001|ref|YP_649917.1| asparagine synthetase AsnA [Yersinia pestis Antiqua]
 gi|108810169|ref|YP_645936.1| asparagine synthetase AsnA [Yersinia pestis Nepal516]
 gi|145601140|ref|YP_001165216.1| asparagine synthetase AsnA [Yersinia pestis Pestoides F]
 gi|150260933|ref|ZP_01917661.1| aspartate-ammonia ligase [Yersinia pestis CA88-4125]
 gi|153947913|ref|YP_001399007.1| asparagine synthetase AsnA [Yersinia pseudotuberculosis IP 31758]
 gi|162419901|ref|YP_001604648.1| asparagine synthetase AsnA [Yersinia pestis Angola]
 gi|165926130|ref|ZP_02221962.1| aspartate--ammonia ligase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939984|ref|ZP_02228521.1| aspartate--ammonia ligase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166009615|ref|ZP_02230513.1| aspartate--ammonia ligase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213201|ref|ZP_02239236.1| aspartate--ammonia ligase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401540|ref|ZP_02307034.1| aspartate--ammonia ligase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422856|ref|ZP_02314609.1| aspartate--ammonia ligase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425564|ref|ZP_02317317.1| aspartate--ammonia ligase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167468634|ref|ZP_02333338.1| aspartate--ammonia ligase [Yersinia pestis FV-1]
 gi|170026418|ref|YP_001722923.1| asparagine synthetase AsnA [Yersinia pseudotuberculosis YPIII]
 gi|186897456|ref|YP_001874568.1| asparagine synthetase AsnA [Yersinia pseudotuberculosis PB1/+]
 gi|218927224|ref|YP_002345099.1| asparagine synthetase AsnA [Yersinia pestis CO92]
 gi|229841929|ref|ZP_04462085.1| aspartate-ammonia ligase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229896806|ref|ZP_04511969.1| aspartate-ammonia ligase [Yersinia pestis Pestoides A]
 gi|229904695|ref|ZP_04519806.1| aspartate-ammonia ligase [Yersinia pestis Nepal516]
 gi|270488404|ref|ZP_06205478.1| aspartate--ammonia ligase [Yersinia pestis KIM D27]
 gi|294502113|ref|YP_003566175.1| asparagine synthetase AsnA [Yersinia pestis Z176003]
 gi|21263430|sp|Q8ZJT3|ASNA_YERPE RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|81691950|sp|Q66GH8|ASNA_YERPS RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|123073667|sp|Q1CNU4|ASNA_YERPN RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|123372786|sp|Q1CC50|ASNA_YERPA RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|166219936|sp|A4TSI1|ASNA_YERPP RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|166988303|sp|A7FCM9|ASNA_YERP3 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|226729526|sp|B2K7I9|ASNA_YERPB RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|226729527|sp|A9QYG3|ASNA_YERPG RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|226729528|sp|B1JR29|ASNA_YERPY RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|21956659|gb|AAM83599.1|AE013601_3 asparagine synthetase A [Yersinia pestis KIM 10]
 gi|45434723|gb|AAS60284.1| aspartate-ammonia ligase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51587644|emb|CAH19243.1| aspartate-ammonia ligase [Yersinia pseudotuberculosis IP 32953]
 gi|108773817|gb|ABG16336.1| aspartate-ammonia ligase [Yersinia pestis Nepal516]
 gi|108777914|gb|ABG11972.1| aspartate-ammonia ligase [Yersinia pestis Antiqua]
 gi|115345835|emb|CAL18693.1| aspartate-ammonia ligase [Yersinia pestis CO92]
 gi|145212836|gb|ABP42243.1| aspartate-ammonia ligase [Yersinia pestis Pestoides F]
 gi|149290341|gb|EDM40418.1| aspartate-ammonia ligase [Yersinia pestis CA88-4125]
 gi|152959408|gb|ABS46869.1| aspartate--ammonia ligase [Yersinia pseudotuberculosis IP 31758]
 gi|162352716|gb|ABX86664.1| aspartate--ammonia ligase [Yersinia pestis Angola]
 gi|165912110|gb|EDR30750.1| aspartate--ammonia ligase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921990|gb|EDR39167.1| aspartate--ammonia ligase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991537|gb|EDR43838.1| aspartate--ammonia ligase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205499|gb|EDR49979.1| aspartate--ammonia ligase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958248|gb|EDR55269.1| aspartate--ammonia ligase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048922|gb|EDR60330.1| aspartate--ammonia ligase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055578|gb|EDR65371.1| aspartate--ammonia ligase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169752952|gb|ACA70470.1| Aspartate--ammonia ligase [Yersinia pseudotuberculosis YPIII]
 gi|186700482|gb|ACC91111.1| aspartate--ammonia ligase [Yersinia pseudotuberculosis PB1/+]
 gi|229678813|gb|EEO74918.1| aspartate-ammonia ligase [Yersinia pestis Nepal516]
 gi|229691268|gb|EEO83321.1| aspartate-ammonia ligase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229700244|gb|EEO88280.1| aspartate-ammonia ligase [Yersinia pestis Pestoides A]
 gi|262360191|gb|ACY56912.1| asparagine synthetase AsnA [Yersinia pestis D106004]
 gi|262364136|gb|ACY60693.1| asparagine synthetase AsnA [Yersinia pestis D182038]
 gi|270336908|gb|EFA47685.1| aspartate--ammonia ligase [Yersinia pestis KIM D27]
 gi|294352572|gb|ADE62913.1| asparagine synthetase AsnA [Yersinia pestis Z176003]
 gi|320013213|gb|ADV96784.1| aspartate-ammonia ligase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 330

 Score = 41.6 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 40/333 (12%), Positives = 88/333 (26%), Gaps = 52/333 (15%)

Query: 30  SSLREYFVEN-----QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLY 77
           S ++ +F          IE+ +  L                      + +          
Sbjct: 13  SFVKSFFSRQLEQQLGLIEVQAPILSRVGDGTQDNLSGSEKAVQVKVKSLPDSTFEVVHS 72

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
           L      +  +     ++ ++    A R        +H       +W R     E+ +  
Sbjct: 73  LAKWKRKTLGRFDFGADQGVYTHMKALRPDEDRLSAIHSVYVDQWDWERVMGDGERNLAY 132

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
             + +        +   +           P++I    + +  A               + 
Sbjct: 133 LKSTVNKIYAAIKETEAAISAEFGVKPFLPDHIQFIHSESLRARFPDLDAKGRERAIAKE 192

Query: 196 LLYLQAQQAGIRVAHD---DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           L  +     G ++A     D  +  +        E   G+N   I+              
Sbjct: 193 LGAVFLIGIGGKLADGQSHDVRAPDYDDWTSPSAEGFSGLNGDIIVW------------- 239

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FL 310
             +P     FE+ +  I                   ++++        +   ++     L
Sbjct: 240 --NPILEDAFEISSMGIR------------VDAEALKRQLAL--TGDEDRLELEWHQSLL 283

Query: 311 ACLTE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
                 MPQ+ G  +G  RLVML+    +I +V
Sbjct: 284 R---GEMPQTIGGGIGQSRLVMLLLQKQHIGQV 313


>gi|197286877|ref|YP_002152749.1| asparagine synthetase AsnA [Proteus mirabilis HI4320]
 gi|227354890|ref|ZP_03839305.1| aspartate-ammonia ligase [Proteus mirabilis ATCC 29906]
 gi|226729510|sp|B4F0D5|ASNA_PROMH RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|194684364|emb|CAR46001.1| aspartate-ammonia ligase (asparagine synthetase A) [Proteus
           mirabilis HI4320]
 gi|227165043|gb|EEI49879.1| aspartate-ammonia ligase [Proteus mirabilis ATCC 29906]
          Length = 330

 Score = 41.6 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 41/328 (12%), Positives = 87/328 (26%), Gaps = 40/328 (12%)

Query: 29  QSSLREYFV-----ENQFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPL 76
            S ++ YF      E   IE+    L                      + +         
Sbjct: 12  ISFVKSYFSRLLEKELGLIEVQGPILSRLGDGTQDNLSGHEKAVQVKVKSLPDSTFEVVH 71

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L      +  +   +  + ++    A R  E              Y     +E++M+  
Sbjct: 72  SLAKWKRKTLGRFGFSSGQGLYTHMKALRPDEDRLTPIHS-----VYVDQWDWEKVMEGE 126

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +    +   +   + +        E           ++ + +       PD   +  
Sbjct: 127 ERTLPYLKQTVGKIYQAIKETEKAVSDEFGLTPFLPDQIQFIHTEEL-LRRYPDLDAKGR 185

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
               A++ G           + S    +   P+         D +        +I   +P
Sbjct: 186 EKAIAKEYGAVFLIGIG-GKLSSGEAHDVRAPDYDDWTTPNEDGF---AGLNGDILVWNP 241

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE- 315
                FE+ +  I +                  +++        +   +D      L   
Sbjct: 242 VLQDAFEVSSMGIRVDP------------ETLMRQLTLTD--DTQRLELDWH--KALMHG 285

Query: 316 -MPQSSGIAMGFDRLVMLVTGANNINEV 342
            MPQ+ G  +G  RLVML+    +I +V
Sbjct: 286 DMPQTIGGGIGQSRLVMLLLQKEHIGQV 313


>gi|126465169|ref|YP_001040278.1| phenylalanyl-tRNA synthetase subunit alpha [Staphylothermus marinus
           F1]
 gi|126013992|gb|ABN69370.1| phenylalanyl-tRNA synthetase, alpha subunit [Staphylothermus
           marinus F1]
          Length = 519

 Score = 41.6 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
             +G DRL M V G ++I +
Sbjct: 464 WGIGIDRLAMAVLGLDDIRD 483


>gi|210616267|ref|ZP_03291017.1| hypothetical protein CLONEX_03238 [Clostridium nexile DSM 1787]
 gi|210149865|gb|EEA80874.1| hypothetical protein CLONEX_03238 [Clostridium nexile DSM 1787]
          Length = 371

 Score = 41.6 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 44/341 (12%), Positives = 96/341 (28%), Gaps = 44/341 (12%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNETHIRAFSTELIIQ------ 69
           +  R+ +   +++ +    F  +++        L    G +     F      +      
Sbjct: 21  MEIRDYVIQMIKDTYRTFGFSSMETPCVEHIENLCSKQGGDNEKLIFKILKRGEKLKLDT 80

Query: 70  ---------DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML 120
                      +R  L +  S  ++    +     K     + WR          +F   
Sbjct: 81  AKEEMDLVDGGLRYDLTVPLSRYYANNASVLPSPFKALQMGNVWRADRPQRGRFRQFMQC 140

Query: 121 EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANI 180
           +     E         + +I     +  +  F    +  N     + +     F      
Sbjct: 141 DIDILGEPSNLA---EIELILATTTLLGKLDFKNFTIRINDRKILKAMAAYSGFEEKDYD 197

Query: 181 DLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRIL------IEKIEPNLGINC 234
            +   LD  D+     +  + ++ G      + + ++F +I           E   G   
Sbjct: 198 TVFIILDKMDKIGLDGVAKELEENGYAKESIEKYLELFKKITNDIEGVRYCKEKLEGFLE 257

Query: 235 CTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQE 294
               D      S++ +   A+ + +    L    +                  FE  M E
Sbjct: 258 AETADGLEMIISSVESAKEAEFKVSFDPTLV-RGMSYYTG-----------TIFEISMDE 305

Query: 295 KKKIYNETYPIDEDFLACLTEMP-QSSGIAMGFDRLVMLVT 334
                      DE  +   T  P  + G ++GF+R+VML+ 
Sbjct: 306 FGGSVGGGGRYDE-MIGKFTGQPTPACGFSIGFERIVMLLL 345


>gi|212712657|ref|ZP_03320785.1| hypothetical protein PROVALCAL_03752 [Providencia alcalifaciens DSM
           30120]
 gi|212684873|gb|EEB44401.1| hypothetical protein PROVALCAL_03752 [Providencia alcalifaciens DSM
           30120]
          Length = 334

 Score = 41.2 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 43/328 (13%), Positives = 87/328 (26%), Gaps = 40/328 (12%)

Query: 29  QSSLREYFV-----ENQFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPL 76
            S ++ YF      E   IE+    L                      + I         
Sbjct: 16  ISFVKSYFSRLLEKELGLIEVQGPILSRLGDGTQDNLSGCEKAVQVKVKSIPGATFEVVH 75

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L      +  +   +  + ++    A R  E              Y     +E++M D 
Sbjct: 76  SLAKWKRKTLGRFGFSEGQGLYTHMKALRPDEDRLTPIHS-----VYVDQWDWEKVMADE 130

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
              +    +   +   + +        E            + + +       PD   +  
Sbjct: 131 ERTLPYLKQTVGKIYKAIKETEAAVSKEFGLAPFLPDQIHFIHSEELLKRY-PDLDAKGR 189

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
               A++ G           + S    +   P+         D +   +    +I   +P
Sbjct: 190 ERAIAKEFGAVFLIGIG-GKLSSGESHDVRAPDYDDWTTENEDGF---KGLNGDIIVWNP 245

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE 315
                FE+ +  I +                  +++        +   ++      L   
Sbjct: 246 VLQDAFEISSMGIRVSP------------ECLTRQLAL--TGDEKRMELEWH--QALVKG 289

Query: 316 -MPQSSGIAMGFDRLVMLVTGANNINEV 342
            MPQS G  +G  RLVML+    +I +V
Sbjct: 290 EMPQSIGGGIGQSRLVMLLLQRKHIGQV 317


>gi|313665429|ref|YP_004047300.1| hypothetical protein MSB_A0559 [Mycoplasma leachii PG50]
 gi|312949315|gb|ADR23911.1| conserved hypothetical protein [Mycoplasma leachii PG50]
          Length = 45

 Score = 41.2 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 331 MLVTGANNINEVIWTP 346
           M++T A +I +VI  P
Sbjct: 1   MILTNAQSIRDVIAFP 16


>gi|184154422|ref|YP_001842763.1| asparagine synthetase AsnA [Lactobacillus reuteri JCM 1112]
 gi|183225766|dbj|BAG26283.1| aspartate-ammonia ligase [Lactobacillus reuteri JCM 1112]
          Length = 339

 Score = 41.2 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 67/261 (25%), Gaps = 36/261 (13%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
            + K+      E ++   +A R   +    H         Y     +E+++         
Sbjct: 92  LALKRYGFGMHEGLYTNMNAIRKEEDLDNFHS-------IYVDQWDWEKIISKDERTEET 144

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
             +         +++    + +            +           PD          A+
Sbjct: 145 LKDTVRDIFKVIKHMEHEVWYKFPQAVYHLPDEIHFVTTQELEDRWPDLTPLEREDKIAK 204

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G          D   R       P+ G                            +R 
Sbjct: 205 ELGAVFV--MKIGDKLQRSGK----PHDGRAPDYDDWSLNGDIIFWYEP------LQRRI 252

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSG 321
           E+ +  I +                 + ++++      E  P  +  L      +P + G
Sbjct: 253 EVSSMGIRVSP------------ESMKYQLEQADATDREKLPFHKMLLN---GELPYTIG 297

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  RL ML+ G  +I EV
Sbjct: 298 GGIGQSRLCMLLLGKAHIGEV 318


>gi|148545089|ref|YP_001272459.1| asparagine synthetase AsnA [Lactobacillus reuteri DSM 20016]
 gi|227364244|ref|ZP_03848339.1| aspartate--ammonia ligase [Lactobacillus reuteri MM2-3]
 gi|325683446|ref|ZP_08162962.1| aspartate-ammonia ligase [Lactobacillus reuteri MM4-1A]
 gi|166988301|sp|A5VMP8|ASNA_LACRD RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|148532123|gb|ABQ84122.1| Aspartate--ammonia ligase [Lactobacillus reuteri DSM 20016]
 gi|227070726|gb|EEI09054.1| aspartate--ammonia ligase [Lactobacillus reuteri MM2-3]
 gi|324977796|gb|EGC14747.1| aspartate-ammonia ligase [Lactobacillus reuteri MM4-1A]
          Length = 336

 Score = 41.2 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 67/261 (25%), Gaps = 36/261 (13%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
            + K+      E ++   +A R   +    H         Y     +E+++         
Sbjct: 89  LALKRYGFGMHEGLYTNMNAIRKEEDLDNFHS-------IYVDQWDWEKIISKDERTEET 141

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
             +         +++    + +            +           PD          A+
Sbjct: 142 LKDTVRDIFKVIKHMEHEVWYKFPQAVYHLPDEIHFVTTQELEDRWPDLTPLEREDKIAK 201

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G          D   R       P+ G                            +R 
Sbjct: 202 ELGAVFV--MKIGDKLQRSGK----PHDGRAPDYDDWSLNGDIIFWYEP------LQRRI 249

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSG 321
           E+ +  I +                 + ++++      E  P  +  L      +P + G
Sbjct: 250 EVSSMGIRVSP------------ESMKYQLEQADATDREKLPFHKMLLN---GELPYTIG 294

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  RL ML+ G  +I EV
Sbjct: 295 GGIGQSRLCMLLLGKAHIGEV 315


>gi|194467333|ref|ZP_03073320.1| aspartate/ammonia ligase [Lactobacillus reuteri 100-23]
 gi|194454369|gb|EDX43266.1| aspartate/ammonia ligase [Lactobacillus reuteri 100-23]
          Length = 336

 Score = 41.2 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 76/265 (28%), Gaps = 44/265 (16%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHE----SYEQLMKDCMN 138
            + K+      E ++   +A R   +    H       +W +       + E L     +
Sbjct: 89  LALKRYGFGMHEGLYTNMNAIRKEEDLDNFHSIYVDQWDWEKVISKDERTEETLKDTVRD 148

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           I +    + ++  + F     +   E  ++T  E   R+           PD        
Sbjct: 149 IFKVIKHMEHEVWYKFPQAVYHLPDEIHFVTTQELEDRW-----------PDLTPLERED 197

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++ G          D   R       P+ G                           
Sbjct: 198 KIAKELGAVFV--MKIGDKLQRSGK----PHDGRAPDYDDWSLNGDIIFWYEP------L 245

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MP 317
            +R E+ +  I +                 + ++++      E  P  +  L      +P
Sbjct: 246 QRRIEISSMGIRVSP------------ESMKYQLEQADATDREKLPFHKMLLN---GELP 290

Query: 318 QSSGIAMGFDRLVMLVTGANNINEV 342
            + G  +G  RL ML+ G  +I EV
Sbjct: 291 YTIGGGIGQSRLCMLLLGKAHIGEV 315


>gi|325125874|gb|ADY85204.1| Aspartate--ammonia ligase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 338

 Score = 41.2 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 88/332 (26%), Gaps = 51/332 (15%)

Query: 27  MIQSSLREYFVENQF-----IE-IDSMS-------LQYSPGNETHIRAFSTELIIQDHIR 73
                +RE F    F     +E I +         L  +        +F+     +  ++
Sbjct: 21  KAIRYIRETFQTE-FGTAMNLERISAPMFVKKSSGLNDNLSGWEKPVSFTLHDGNEGELQ 79

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
               L     ++ K    +  E +F   +A R          E  +   +  +       
Sbjct: 80  IVHSLAKWKRWALKHYGFSHGEGLFTNMNAIRKD--------EEVLDNLHSVYVDQWDWE 131

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           K      R  A +                   E I   E   R           +  +  
Sbjct: 132 KVIDKSERTEATLRQTVQRI-----------FETIKGMEYHVRAL---YPQAAYHLPEEI 177

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
             +   + +     +   +    I        +E   G          P  +       P
Sbjct: 178 SFVTSEELEARWPSLTPSEREDKICQEKGAVFLEHIGGAL--------PLSKKPHDLRAP 229

Query: 254 ADPRFTKRFELYACNIELCNACD-ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
               +T   +L      L  A +   +       R +++++           +D  F   
Sbjct: 230 DYDDWTLNGDLLFWYEPLQRAFEVSSMGIRVDEDRLQEQLKLASAEDR----LDLPFHQA 285

Query: 313 L-TE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
           L    +P S G  +G  RL ML+ G  +I EV
Sbjct: 286 LLKGDLPYSIGGGIGQSRLCMLLLGKAHIGEV 317


>gi|227543673|ref|ZP_03973722.1| aspartate--ammonia ligase [Lactobacillus reuteri CF48-3A]
 gi|300908733|ref|ZP_07126196.1| aspartate--ammonia ligase [Lactobacillus reuteri SD2112]
 gi|227186357|gb|EEI66428.1| aspartate--ammonia ligase [Lactobacillus reuteri CF48-3A]
 gi|300894140|gb|EFK87498.1| aspartate--ammonia ligase [Lactobacillus reuteri SD2112]
          Length = 336

 Score = 41.2 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 67/261 (25%), Gaps = 36/261 (13%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
            + K+      E ++   +A R   +    H         Y     +E+++         
Sbjct: 89  LALKRYGFGMHEGLYTNMNAIRKEEDLDNFHS-------IYVDQWDWEKIISKDERTEET 141

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
             +         +++    + +            +           PD          A+
Sbjct: 142 LKDTVRDIFKVIKHMEHEVWYKFPQAVYHLPDEIHFVTTQELEDRWPDLTPLEREDKIAK 201

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G          D   R       P+ G                            +R 
Sbjct: 202 ELGAVFV--MKIGDKLQRSGK----PHDGRAPDYDDWSLNGDIIFWYEP------LQRRI 249

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSG 321
           E+ +  I +                 + ++++      E  P  +  L      +P + G
Sbjct: 250 EISSMGIRVSP------------ESMKYQLEQADATDREKLPFHKMLLN---GELPYTIG 294

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  RL ML+ G  +I EV
Sbjct: 295 GGIGQSRLCMLLLGKAHIGEV 315


>gi|238783010|ref|ZP_04627037.1| Aspartate--ammonia ligase [Yersinia bercovieri ATCC 43970]
 gi|238716011|gb|EEQ07996.1| Aspartate--ammonia ligase [Yersinia bercovieri ATCC 43970]
          Length = 330

 Score = 41.2 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 40/331 (12%), Positives = 84/331 (25%), Gaps = 48/331 (14%)

Query: 30  SSLREYFVEN-----QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLY 77
           S ++ +F          IE+ +  L                      + +          
Sbjct: 13  SFVKSFFSRQLEQQLGLIEVQAPILSRVGDGTQDNLSGSEKAVQVKVKTLPDATFEVVHS 72

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
           L      +  +     ++ ++    A R        +H       +W R     E+ +  
Sbjct: 73  LAKWKRKTLGRFDFGADQGLYTHMKALRPDEDRLSAIHSVYVDQWDWERVMGDGERNLAY 132

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
             + +        +   +           PE I    +    +               + 
Sbjct: 133 LKSTVNKIYAAIKETEATVSAEFGIKPFLPEQIHFVHSETLRSRFPDLDAKGRERAIAKE 192

Query: 196 LLYLQAQQAGIRVAHD---DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           L  +     G ++A     D  +  +        E   G+N   I+              
Sbjct: 193 LGAVFLIGIGGKLADGQSHDVRAPDYDDWTSPCAEGFTGLNGDIIVW------------- 239

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             +P     FE+ +  I                   ++++              +  L  
Sbjct: 240 --NPVLEDAFEISSMGIR------------VDAEALKRQLALTADEDRLKLEWHQSLLN- 284

Query: 313 LTE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
               MPQ+ G  +G  RLVML+    +I +V
Sbjct: 285 --GEMPQTIGGGIGQSRLVMLLLQQQHIGQV 313


>gi|206889416|ref|YP_002249587.1| histidyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|226737080|sp|B5YHK1|SYH_THEYD RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|206741354|gb|ACI20411.1| histidyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 420

 Score = 40.8 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 27/323 (8%), Positives = 79/323 (24%), Gaps = 64/323 (19%)

Query: 33  REYFVENQFIEIDSMS-------LQYSP-----------------GNETHIRAFSTELII 68
           R+      F EI +         L+                    G +  +R   T  ++
Sbjct: 28  RKILENYNFQEIRTPIVENAELFLRSIGEDTDIVEKEMYVFQDKKGRKVALRPEGTASVV 87

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHES 128
           + +I+   +    P+              +     +R          +F  +       S
Sbjct: 88  RAYIQHNFFNNPPPQKF------------YYIGPMFRYERPQKGRFRQFHQIGVECFGVS 135

Query: 129 YEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDN 188
              +  + + +++   E  N    +++  +     +       +    +    +     +
Sbjct: 136 SSWIDAELIYMLKLFLEKLNINNLTYEINSL--GCKRCRPQYRKVLFSFLADKVNQLCID 193

Query: 189 PDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESAL 248
             +                       + +    L +  + +                  +
Sbjct: 194 CKRRFEKNPLRVLDCKVPSCKESLKNTPLIVDFLCQDCKEHFLSLQ--------KELDEM 245

Query: 249 ANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED 308
              Y  +P+  +  + Y   +       E+   +        +              D D
Sbjct: 246 NISYAVNPKIVRGLDYYTRTVF------EVTTTM-----LGAQNAVAAGG-----RYD-D 288

Query: 309 FLACLTE-MPQSSGIAMGFDRLV 330
            +         ++G A+G +RL+
Sbjct: 289 LVELFGGPTTPAAGFAIGMERLI 311


>gi|70607254|ref|YP_256124.1| phenylalanyl-tRNA synthetase subunit alpha [Sulfolobus
           acidocaldarius DSM 639]
 gi|76363436|sp|Q4J8P9|SYFA_SULAC RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|68567902|gb|AAY80831.1| phenylalanyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 465

 Score = 40.8 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 12/42 (28%)

Query: 300 NETYPIDEDFLACLTEMPQSSG-IAMGFDRLVMLVTGANNIN 340
            +   ID +           +G   +G DRL ML+ G  +I 
Sbjct: 418 LKAMDIDAN-----------AGAWGIGIDRLAMLLFGLKDIR 448


>gi|157373136|ref|YP_001481125.1| asparagine synthetase AsnA [Serratia proteamaculans 568]
 gi|166988302|sp|A8GLK7|ASNA_SERP5 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|157324900|gb|ABV43997.1| Aspartate--ammonia ligase [Serratia proteamaculans 568]
          Length = 330

 Score = 40.8 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 49/334 (14%), Positives = 92/334 (27%), Gaps = 62/334 (18%)

Query: 34  EYFVEN-----QFIEIDSMSLQYSP-GNETHIRAFS--TELIIQDHIRKPLYLQTSPEFS 85
            +F          IE+ +  L     G + ++       ++ ++        +  S    
Sbjct: 17  SFFSRQLEQQLGLIEVQAPILSRLGDGTQDNLSGSEKAVQVKVKTLPDATFEVVHSLAKW 76

Query: 86  CKKLLAAG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
            +K L +      E ++    A R        +H       +W R     E+      + 
Sbjct: 77  KRKTLGSYDFGAGEGLYTHMKALRPDEDRLSAIHSVYVDQWDWERVMGDGERSQDYLEST 136

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYL 199
           +R                       PE I    +                    + L  +
Sbjct: 137 VRSIYAAIKATEGEVSREYGLTPFLPEQIHFVHSETLLQRYPELDAKGRERAIAKELGAV 196

Query: 200 QAQQAGIRVAHD---DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                G +++H    D  +  +        E   G+N   ++                +P
Sbjct: 197 FLIGIGGKLSHGKSHDVRAPDYDDWTTPAAEGLAGLNGDILVW---------------NP 241

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLT-- 314
                FEL +  I +                       K+++       DED L  L   
Sbjct: 242 VLQDAFELSSMGIRV------------------DASALKRQL---AQTGDEDRL-ALEWH 279

Query: 315 -----E-MPQSSGIAMGFDRLVMLVTGANNINEV 342
                  MPQ+ G  +G  RLVML+   ++I +V
Sbjct: 280 QSLLRGEMPQTIGGGIGQSRLVMLLLQLSHIGQV 313


>gi|257386730|ref|YP_003176503.1| phenylalanyl-tRNA synthetase subunit alpha [Halomicrobium
           mukohataei DSM 12286]
 gi|257169037|gb|ACV46796.1| phenylalanyl-tRNA synthetase, alpha subunit [Halomicrobium
           mukohataei DSM 12286]
          Length = 502

 Score = 40.8 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 15/21 (71%)

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +  +RL+MLVTGA +I +V
Sbjct: 465 WGLALERLLMLVTGAEDIRDV 485


>gi|313123829|ref|YP_004034088.1| aspartate--ammonia ligase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280392|gb|ADQ61111.1| Aspartate--ammonia ligase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|325686095|gb|EGD28147.1| aspartate-ammonia ligase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 338

 Score = 40.8 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 87/332 (26%), Gaps = 51/332 (15%)

Query: 27  MIQSSLREYFVENQF-----IE-IDSMS-------LQYSPGNETHIRAFSTELIIQDHIR 73
                +RE F    F     +E I +         L  +        +F+     +  ++
Sbjct: 21  KAIRYIRETFQTE-FGTAMNLERISAPMFVKKSSGLNDNLSGWEKPVSFTLHDGDEGELQ 79

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
               L     ++ K       E +F   +A R          E  +   +  +       
Sbjct: 80  IVHSLAKWKRWALKHYGFGHGEGLFTNMNAIRKD--------EEVLDNLHSVYVDQWDWE 131

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           K      R  A +                   E I   E   R           +  +  
Sbjct: 132 KVIDKSERTEATLRQTVQRI-----------FETIKGMEYHVRAL---YPQAAYHLPEEI 177

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
             +   + +     +   +    I        +E   G          P  +       P
Sbjct: 178 SFVTSEELEARWPSLTPSEREDKICQEKGAVFLEHIGGAL--------PLSKKPHDLRAP 229

Query: 254 ADPRFTKRFELYACNIELCNACD-ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
               +T   +L      L  A +   +       R +++++           +D  F   
Sbjct: 230 DYDDWTLNGDLLFWYEPLQRAFEVSSMGIRVDEDRLQEQLKLAGAEDR----LDLPFHQA 285

Query: 313 L-TE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
           L    +P S G  +G  RL ML+ G  +I EV
Sbjct: 286 LLKGDLPYSIGGGIGQSRLCMLLLGKAHIGEV 317


>gi|104774114|ref|YP_619094.1| asparagine synthetase AsnA [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116241259|sp|P54264|ASNA_LACDA RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|103423195|emb|CAI97996.1| Aspartate-ammonia ligase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 338

 Score = 40.8 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 88/332 (26%), Gaps = 51/332 (15%)

Query: 27  MIQSSLREYFVENQF-----IE-IDSMS-------LQYSPGNETHIRAFSTELIIQDHIR 73
                +RE F    F     +E I +         L  +        +F+     +  ++
Sbjct: 21  KAIRYIRETFQTE-FGTAMNLERISAPMFVKKSSGLNDNLSGWEKPVSFTLHDGNEGELQ 79

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
               L     ++ K    +  E +F   +A R          E  +   +  +       
Sbjct: 80  IVHSLAKWKRWALKHYGFSHGEGLFTNMNAIRKD--------EEVLDNLHSVYVDQWDWE 131

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           K      R  A +                   E I   E   R           +  +  
Sbjct: 132 KVIDKSERTEATLRQTVQRI-----------FETIKGMEYHVRAL---YPQAAYHLPEEI 177

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
             +   + +     +   +    I        +E   G          P  +       P
Sbjct: 178 SFVTSEELEARWPSLTPSEREDKICQEKGAVFLEHIGGAL--------PLSKKPHDLRAP 229

Query: 254 ADPRFTKRFELYACNIELCNACD-ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
               +T   +L      L  A +   +       R +++++           +D  F   
Sbjct: 230 DYDDWTLNGDLLFWYEPLQRAFEVSSMSIRVDEDRLQEQLKLAGAEDR----LDLPFHQA 285

Query: 313 L-TE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
           L    +P S G  +G  RL ML+ G  +I EV
Sbjct: 286 LLKGDLPYSIGGGIGQSRLCMLLLGKAHIGEV 317


>gi|70913480|ref|XP_731553.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56501454|emb|CAH84472.1| hypothetical protein PC301059.00.0 [Plasmodium chabaudi chabaudi]
          Length = 37

 Score = 40.8 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 26 NMIQSSLREYFVENQFIEIDSM-SLQYSPGNETHI 59
          + I    R Y ++N F EI +   L  S     + 
Sbjct: 2  SEICKIFRNYLIDNNFTEIHTPKLLGESSEGGANA 36


>gi|86159851|ref|YP_466636.1| phenylalanyl-tRNA synthetase subunit alpha [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776362|gb|ABC83199.1| phenylalanyl-tRNA synthetase, alpha subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 312 CLTEMP-QSSG--IAMGFDRLVMLVTGANNIN 340
               +P  +SG  + +G DRLVML  G ++I 
Sbjct: 211 AEAGLPADASGLAMGLGLDRLVMLAKGLDDIR 242


>gi|213422970|ref|ZP_03355989.1| lysyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 58

 Score = 40.8 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 26/54 (48%)

Query: 97  IFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQK 150
           +F     +RN      H PEFTM+E Y A+  Y+ L++   ++ R  A+     
Sbjct: 1   VFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDVLGT 54


>gi|317494631|ref|ZP_07953043.1| aspartate-ammonia ligase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917233|gb|EFV38580.1| aspartate-ammonia ligase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 330

 Score = 40.8 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 85/334 (25%), Gaps = 46/334 (13%)

Query: 38  ENQFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLL 90
           +   IE+ +  L                      + + QD       L      +     
Sbjct: 26  QLGLIEVQAPILSRLGDGTQDNLSGCEKAVQVKVKTLPQDTFEVVHSLAKWKRKTLGMHD 85

Query: 91  AAGEEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVAN 148
               E ++    A R        +H       +W R     ++  +     +R       
Sbjct: 86  FGPGEGLYTHMKALRPDEDRLTPIHSVFVDQWDWERVMGDGQRTPEFLKETVRKIYAAMK 145

Query: 149 QKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRV 208
                         S PE I    +                    +    +     G ++
Sbjct: 146 ATEAEVAAEFGIEPSLPEEIHFIHSETLLRRFPDLDAKGRERAIAKEFGAVFLIGIGGKL 205

Query: 209 AHDDTW---SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           +H       +  +        E   G+N   ++                +P     FEL 
Sbjct: 206 SHGKPHDVRAPDYDDWTSVGEEGFAGLNGDIVVW---------------NPVLEDAFELS 250

Query: 266 ACNIEL-CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAM 324
           +  I +  +     L   +   R + E  +                     MPQ+ G  +
Sbjct: 251 SMGIRVDADTLKRQLSLTDDEERMKLEWHQSLVRGE---------------MPQTIGGGI 295

Query: 325 GFDRLVMLVTGANNINEV---IWTPFSQSNQEEI 355
           G  RLVML+    +I +V   +W P  +   + +
Sbjct: 296 GQSRLVMLMLKQKHIGQVQCGVWAPEVREQVDAL 329


>gi|296131571|ref|YP_003638818.1| Pyrrolysine--tRNA(Pyl) ligase [Thermincola sp. JR]
 gi|296030149|gb|ADG80917.1| Pyrrolysine--tRNA(Pyl) ligase [Thermincola potens JR]
          Length = 277

 Score = 40.8 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 48/146 (32%), Gaps = 18/146 (12%)

Query: 18  RRPFL-LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDH----I 72
           RRP L    + +  +      E  F+++ + ++       +  +   T+          +
Sbjct: 60  RRPSLCELESKLVEA----LTEKGFVQVITPTIISK---ASLAKMSITDDHPLFSQVFWL 112

Query: 73  RKPLYLQT--SPEFSC--KKLLAAGEEKI--FCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
            K   L+   +P      K L+    + I  F     +R   QG  H  EFTML      
Sbjct: 113 DKKRCLRPMLAPNLYTLWKDLVRLWSKPIRIFEIGTCYRKESQGAYHLNEFTMLNVTELG 172

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIF 152
               +  +   +I     + A    +
Sbjct: 173 LPENKRHQWLEDIASLVMDTAGITDY 198


>gi|167044354|gb|ABZ09032.1| putative anticodon binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG6C9]
          Length = 616

 Score = 40.8 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 54/152 (35%), Gaps = 16/152 (10%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
           L ++ I+  + +   +   IE+++  +   + P  E++   F       D   + L+L+ 
Sbjct: 227 LIKSQIEQYVTDKVRDYGGIEVETPIMYDSHHPSMESYFNRFPARQYSIDSEGRHLFLRF 286

Query: 81  SPEFSCKKLLAAGEEKIFC---------FAHAWRNGEQGC----LHQPEFTMLEWYRAHE 127
           S     + L+A+  +  +            +++R  + G          FTM + +   +
Sbjct: 287 SAC-FGQFLMASDFQLSYKNLPYKLYELTRYSFRREQSGELVGLRRLRAFTMPDCHAFCK 345

Query: 128 SYEQLMKDCMNIIRCAAEVANQKIFSFQNVNC 159
              Q + +       + EV +       +   
Sbjct: 346 DMPQAIDEFGKRFDLSREVLSGLGIEENDYET 377


>gi|4139528|pdb|11AS|A Chain A, Asparagine Synthetase Mutant C51a, C315a Complexed With L-
           Asparagine
 gi|4139530|pdb|11AS|B Chain B, Asparagine Synthetase Mutant C51a, C315a Complexed With L-
           Asparagine
 gi|4139532|pdb|12AS|A Chain A, Asparagine Synthetase Mutant C51a, C315a Complexed With L-
           Asparagine And Amp
 gi|4139534|pdb|12AS|B Chain B, Asparagine Synthetase Mutant C51a, C315a Complexed With L-
           Asparagine And Amp
          Length = 330

 Score = 40.4 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 41/327 (12%), Positives = 79/327 (24%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCK 87
             E    IE+ +  L                      + +          L      +  
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGAEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 88  KLLAAGEEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
           +   +  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLELEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|294638363|ref|ZP_06716616.1| aspartate--ammonia ligase [Edwardsiella tarda ATCC 23685]
 gi|291088616|gb|EFE21177.1| aspartate--ammonia ligase [Edwardsiella tarda ATCC 23685]
          Length = 330

 Score = 40.4 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 88/334 (26%), Gaps = 52/334 (15%)

Query: 29  QSSLREYFVEN-----QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPL 76
            S ++++F          IE+ +  L                      + + QD      
Sbjct: 12  ISFVKQHFSRQLEQRLGLIEVQAPILSRLGDGTQDNLSGHEKAVQVKVKNLPQDTFEVVH 71

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
            L      +      A  E ++    A R        +H       +W R     E+   
Sbjct: 72  SLAKWKRKTLGTYDFAPGEGLYTHMKALRPDEDRLSAIHSVYVDQWDWERVMGDGERTPA 131

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
              + +R                       P  I    +             +      R
Sbjct: 132 YLQDTVRQIYAAMKTTEQEVCERYGLTPFLPAEIHFIHSEMLLRRYPDLDAKERERAITR 191

Query: 195 HLLYLQAQQAGIRVAHD---DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI 251
            L  +     G  +++    D  +  +        E   G+N   ++             
Sbjct: 192 ELGAVFLMGIGGCLSNGQAHDVRAPDYDDWTSLGSEGLGGLNGDILVW------------ 239

Query: 252 YPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI--YNETYPIDEDF 309
              +P     FEL +  I                 R + +  +++     +E     E  
Sbjct: 240 ---NPVLEDAFELSSMGI-----------------RVDAQALKRQLALTDDEDRMALEWH 279

Query: 310 LACLTE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
            + L   MPQ+ G  +G  RLVML+    +I +V
Sbjct: 280 QSLLRGEMPQTIGGGIGQSRLVMLLLQQQHIGQV 313


>gi|71894309|ref|YP_278417.1| hypothetical protein MS53_0292 [Mycoplasma synoviae 53]
          Length = 78

 Score = 40.4 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 319 SSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           +SG  +G +RLV+ +    +I  V   P 
Sbjct: 42  TSGFGLGLERLVLFIIDEKDIRNVQLLPR 70


>gi|296236275|ref|XP_002763246.1| PREDICTED: NF-kappa-B-repressing factor-like [Callithrix jacchus]
          Length = 952

 Score = 40.4 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 9/59 (15%)

Query: 23 LKRNMIQSSL--REYFVENQFIEIDSMSLQYSPGNETHIRAF-------STELIIQDHI 72
          + RN IQ S+  +EYFV   +  +D+  LQ     +   R F        T     + +
Sbjct: 8  ILRNKIQHSIDTKEYFVSRGYQRLDTPILQSIKVGKRDSRHFKEPCWTVRTPSYAFNPL 66


>gi|213022891|ref|ZP_03337338.1| asparaginyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 114

 Score = 40.4 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 2/85 (2%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC-LHQPEFTMLEWYRA 125
             +D   K  +L  S + + +    A   KI+ F   +R        H  EF MLE   A
Sbjct: 24  FDKDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVA 82

Query: 126 HESYEQLMKDCMNIIRCAAEVANQK 150
               E   +    +++   +   ++
Sbjct: 83  FADLEDNARLAEAMLKYVFKAVLEE 107


>gi|197123905|ref|YP_002135856.1| phenylalanyl-tRNA synthetase class IIc [Anaeromyxobacter sp. K]
 gi|196173754|gb|ACG74727.1| phenylalanyl-tRNA synthetase class IIc [Anaeromyxobacter sp. K]
          Length = 378

 Score = 40.4 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 312 CLTEMP-QSSG--IAMGFDRLVMLVTGANNIN 340
               +P  +SG  + +G DRLVML  G ++I 
Sbjct: 211 AEAGLPGDASGLAMGLGLDRLVMLAKGLDDIR 242


>gi|325280804|ref|YP_004253346.1| Aspartate--ammonia ligase [Odoribacter splanchnicus DSM 20712]
 gi|324312613|gb|ADY33166.1| Aspartate--ammonia ligase [Odoribacter splanchnicus DSM 20712]
          Length = 345

 Score = 40.4 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
           R   EK++  K     +        L  L   +PQ+ G  +G  RL ML+    +I EV
Sbjct: 269 RAALEKQLWLKNAGDRKKLYF-HSLL--LEGKLPQTMGGGIGQSRLCMLLLQKCHIGEV 324


>gi|295693797|ref|YP_003602407.1| aspartate--ammonia ligase [Lactobacillus crispatus ST1]
 gi|295031903|emb|CBL51382.1| Aspartate--ammonia ligase [Lactobacillus crispatus ST1]
          Length = 337

 Score = 40.4 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 71/263 (26%), Gaps = 40/263 (15%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
            + K+      E ++   +A R + +    H       +W +               IR 
Sbjct: 90  LALKRYGFGMHEGLYTNMNAIRRDEDLDNFHSIYVDQWDWEKV--------------IRK 135

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR--HLLYLQ 200
                +    +   +        + ++     + Y   D  + +   +  DR   L   +
Sbjct: 136 EERNTDTLEITVNKIFKAIKETEKLVSARYPGSTYRLADHVSFITTQELEDRWPDLSPEE 195

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTK 260
            +    +         I  ++     EP+ G                       D     
Sbjct: 196 REDKIAKEEKAVFIMKIGDKLKRSG-EPHDGRAP------------------DYDDWQLN 236

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQS 319
              ++             +          +++++      E  P  +     L   +P +
Sbjct: 237 GDLIFWYEPLQSKLEISSMGIRVSEESLREQLKKAHCEDREKLPFHQML---LKGELPYT 293

Query: 320 SGIAMGFDRLVMLVTGANNINEV 342
            G  +G  RL ML+ G  +I EV
Sbjct: 294 IGGGIGQSRLCMLLLGKAHIGEV 316


>gi|15791263|ref|NP_281087.1| phenylalanyl-tRNA synthetase subunit alpha [Halobacterium sp.
           NRC-1]
 gi|169237021|ref|YP_001690221.1| phenylalanyl-tRNA synthetase subunit alpha [Halobacterium salinarum
           R1]
 gi|24212467|sp|Q9HMK4|SYFA_HALSA RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|229470678|sp|B0R806|SYFA_HALS3 RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|10581896|gb|AAG20567.1| phenylalanyl-tRNA synthetase subunit alpha [Halobacterium sp.
           NRC-1]
 gi|167728087|emb|CAP14875.1| phenylalanine--tRNA ligase alpha subunit [Halobacterium salinarum
           R1]
          Length = 502

 Score = 40.4 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +  +RL+ML+TG  +I +V
Sbjct: 465 WGLALERLLMLMTGFEDIRDV 485


>gi|332159627|ref|YP_004296204.1| asparagine synthetase AsnA [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318603721|emb|CBY25219.1| aspartate--ammonia ligase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325663857|gb|ADZ40501.1| asparagine synthetase AsnA [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861792|emb|CBX71965.1| aspartate--ammonia ligase [Yersinia enterocolitica W22703]
          Length = 330

 Score = 40.4 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 85/331 (25%), Gaps = 48/331 (14%)

Query: 30  SSLREYFVEN-----QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLY 77
           S ++ +F          IE+ +  L                      + +          
Sbjct: 13  SFVKSFFSRQLEQQLGLIEVQAPILSRVGDGTQDNLSGSEKAVQVKVKSLPDATFEVVHS 72

Query: 78  LQTSPEFSCKKLLAAGEEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKD 135
           L      +  +     ++ I+    A R        +H       +W R     E+ +  
Sbjct: 73  LAKWKRKTLGRFDFGADQGIYTHMKALRPDEDRLSAIHSVYVDQWDWERVMGDGERNLAY 132

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
             + +        +   +           PE I    + +  A               + 
Sbjct: 133 LKSTVNKIYAAIKETEAAISAEFDIKPFLPEQIHFIHSESLRAKFPDLDAKGRERAIAKE 192

Query: 196 LLYLQAQQAGIRVAHD---DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIY 252
           L  +     G ++A     D  +  +        E   G+N   I+              
Sbjct: 193 LGAVFLIGIGGKLADGKSHDVRAPDYDDWTSPSAEGFAGLNGDIIVW------------- 239

Query: 253 PADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
             +P     FE+ +  I                   ++++              +     
Sbjct: 240 --NPVLEDAFEISSMGIR------------VDAEALKRQLALTSDEDRLKLEWHQSL--- 282

Query: 313 LTE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
           L   MPQ+ G  +G  RLVML+    +I +V
Sbjct: 283 LKGEMPQTIGGGIGQSRLVMLLLQLPHIGQV 313


>gi|270669268|ref|ZP_06222588.1| asparagine-tRNA ligase [Haemophilus influenzae HK1212]
 gi|270316588|gb|EFA28415.1| asparagine-tRNA ligase [Haemophilus influenzae HK1212]
          Length = 160

 Score = 40.4 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 2/99 (2%)

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRA 125
             QD   K  +L  S + + +    A   KI+ F   +R        H  EF M+E   A
Sbjct: 56  FSQDFFGKESFLTVSGQLNGETYACA-LSKIYTFGPTFRAENSNTTRHLAEFWMVEPEVA 114

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSE 164
             +     K   ++++        +             +
Sbjct: 115 FATLADNAKLAEDMLKYVFRAVLAERKDDLQFFEKHVDK 153


>gi|147855038|emb|CAN82378.1| hypothetical protein VITISV_036229 [Vitis vinifera]
          Length = 1395

 Score = 40.4 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 33/299 (11%), Positives = 72/299 (24%), Gaps = 13/299 (4%)

Query: 18  RRPFLLKRNMIQSSL----REYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIR 73
           RRP    R      L    RE  ++N++ E++   L     ++        E + +    
Sbjct: 222 RRPVARPRAATAQELLRVCRE--IQNRYGEVEVPFLVVHGADDVVCDPACVEELYRRAPS 279

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAW-----RNGEQGCLHQPEFTMLEW--YRAH 126
           K   L+  P+   + +    E     F         R                       
Sbjct: 280 KDKTLKIYPDMIHQLVGEPDENVELVFGDIVEWLRTRAESAAAGGGDGGACGCITTEVGG 339

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
              +       +  R   E   +        N       ++         +A +D    +
Sbjct: 340 VLGDGNGIQDDDRRRWWLENVKEMTLPPTRFNGWKEKYAKHHGCGIMDGFFAGMDCRLRV 399

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
              D     +L+    +A  +V   +      + I        + +  C           
Sbjct: 400 SITDSIMMSILHSAMDKAHEKVKSKEGDIGRLNEITKFYELAIMQLEGCLNFVEEEMDNY 459

Query: 247 ALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
              + +       K                      E   R E E++ ++ +  +   +
Sbjct: 460 IPESCHEKMLLDVKEIRDRLRGRLKETEFALSEKDRELTERLENELKLRQALELKEAEL 518


>gi|116514185|ref|YP_813091.1| asparagine synthetase AsnA [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275083|sp|Q04A69|ASNA_LACDB RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|116093500|gb|ABJ58653.1| aspartate-ammonia ligase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 338

 Score = 40.4 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 88/332 (26%), Gaps = 51/332 (15%)

Query: 27  MIQSSLREYFVENQF-----IE-IDSMS-------LQYSPGNETHIRAFSTELIIQDHIR 73
                +RE F    F     +E I +         L  +        +F+     +  ++
Sbjct: 21  KAIRYIRETFQTE-FGTAMNLERISAPMFVKKSSGLNDNLSGWEKPVSFTLHDGNEGELQ 79

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
               L     ++ K    +  E +F   +A R          E  +   +  +       
Sbjct: 80  IVHSLAKWKRWALKHYGFSHGEGLFTNMNAIRKD--------EEVLDNLHSVYVDQWDWE 131

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           K      R  A +                   E I   E   R           +  +  
Sbjct: 132 KVIDKSERTEATLRQTVQRI-----------FETIKGMEYHVRAL---YPQAAYHLPEEI 177

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
             +   + +     +   +    I        +E   G          P  +       P
Sbjct: 178 SFVTSEELEARWPSLTPSEREDKICQEKGAVFLEHIGGAL--------PLSKKPHDLRAP 229

Query: 254 ADPRFTKRFELYACNIELCNACD-ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
               +T   +L      L  A +   +       R +++++           +D  F   
Sbjct: 230 DYDDWTLNGDLLFWYEPLQRAFEVSSMGIRVDEDRLQEQLKLAGAEDR----LDLPFHQA 285

Query: 313 L-TE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
           L    +P S G  +G  RL ML+ G  +I EV
Sbjct: 286 LLKGDLPYSIGGGIGQSRLCMLLLGKAHIGEV 317


>gi|220918674|ref|YP_002493978.1| phenylalanyl-tRNA synthetase class IIc [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956528|gb|ACL66912.1| phenylalanyl-tRNA synthetase class IIc [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 378

 Score = 40.0 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 312 CLTEMP-QSSG--IAMGFDRLVMLVTGANNIN 340
               +P  +SG  + +G DRLVML  G ++I 
Sbjct: 211 AEAGLPEDASGLAMGLGLDRLVMLAKGLDDIR 242


>gi|302389916|ref|YP_003825737.1| histidyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302200544|gb|ADL08114.1| histidyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 423

 Score = 40.0 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 6/27 (22%), Positives = 14/27 (51%), Gaps = 1/27 (3%)

Query: 308 DFLACLTEMP-QSSGIAMGFDRLVMLV 333
             +      P  ++G  +G +RL+M++
Sbjct: 288 HLVEECGGPPTPAAGFGIGIERLIMVL 314


>gi|257052748|ref|YP_003130581.1| phenylalanyl-tRNA synthetase subunit alpha [Halorhabdus utahensis
           DSM 12940]
 gi|256691511|gb|ACV11848.1| phenylalanyl-tRNA synthetase, alpha subunit [Halorhabdus utahensis
           DSM 12940]
          Length = 501

 Score = 40.0 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 15/21 (71%)

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +  +RL+MLVTGA +I +V
Sbjct: 464 WGLALERLMMLVTGAEDIRDV 484


>gi|268320178|ref|YP_003293834.1| asparagine synthetase AsnA [Lactobacillus johnsonii FI9785]
 gi|262398553|emb|CAX67567.1| asparagine synthetase AsnA [Lactobacillus johnsonii FI9785]
          Length = 336

 Score = 40.0 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 68/263 (25%), Gaps = 40/263 (15%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
            + K+      E ++   +A R + +    H       +W +     E+ ++     ++ 
Sbjct: 89  LALKRYGFGMHEGLYTNMNAIRRDEDLDNFHSIYVDQWDWEKIIAKEERNIETLKTTVKQ 148

Query: 143 AAEVANQKIFSFQNVNCNPFSE-PEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
             +   +                P  IT           D    L   ++ D+     +A
Sbjct: 149 IFKAIKETEKELSARYPGSTYRLPSDITFITTQE---LEDRWPDLGPEEREDKIAKEKKA 205

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
                         D   R       P+ G                       D      
Sbjct: 206 VFL-------MKIGDRLKRSGK----PHDGRAP------------------DYDDWQLNG 236

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID-EDFLACLTE-MPQS 319
             L+             +         +++   KK    E   +     L  L   +P +
Sbjct: 237 DLLFWYKPLQRKIEISSMGIRVSEESLKEQ--LKKAHTEERSELPFHKML--LEGKLPYT 292

Query: 320 SGIAMGFDRLVMLVTGANNINEV 342
            G  +G  RL ML+ G  +I EV
Sbjct: 293 IGGGIGQSRLCMLLLGKAHIGEV 315


>gi|315127924|ref|YP_004069927.1| asparagine synthetase AsnA [Pseudoalteromonas sp. SM9913]
 gi|315016438|gb|ADT69776.1| asparagine synthetase AsnA [Pseudoalteromonas sp. SM9913]
          Length = 331

 Score = 40.0 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 42/328 (12%), Positives = 90/328 (27%), Gaps = 39/328 (11%)

Query: 29  QSSLREYFVEN-----QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPL 76
            S ++++F +        IE+ +  L               +  A + + I         
Sbjct: 12  ISKVKQFFSQQLEQKLGLIEVQAPILAKVGDGTQDNLSGHENAVAVNVKAITDSRYEVVH 71

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L      +  +   +  E I+    A R  E              Y     +EQ++ + 
Sbjct: 72  SLAKWKRKTLGEYGFSKGEGIYTQMKALRPDEDSLSPIHS-----VYVDQWDWEQVICES 126

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
                   +   + I+          S+   +T                   PD   +  
Sbjct: 127 TQRSLSTLKQTVETIYQGIKATEKYVSDSFGLTPFLPTEITFVHSEALRKMYPDFTAKQR 186

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
                Q+ G           +    + +   P+         ++Y        +I   +P
Sbjct: 187 EKAITQEYGAVFLIGIG-GALSDGKIHDVRAPDYDDWSTPTCEQY---MGLNGDILVWNP 242

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL--T 314
                FE+ +  I +                 + ++        +    D      L  +
Sbjct: 243 VLEDAFEISSMGIRVSP------------EVLQTQLSI--TGDEDRLEFDWH--KALLES 286

Query: 315 EMPQSSGIAMGFDRLVMLVTGANNINEV 342
           ++PQ+ G  +G  RL ML+    +I +V
Sbjct: 287 KLPQTIGGGIGQSRLAMLLLQKQHIGQV 314


>gi|103488192|ref|YP_617753.1| histidyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98978269|gb|ABF54420.1| histidyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 431

 Score = 40.0 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%)

Query: 309 FLACLTEMPQSS--GIAMGFDRLVMLVTGAN 337
            +  L   P ++  G A G +RL MLV G++
Sbjct: 310 LIEALGG-PPTAAVGWAAGIERLAMLVEGSS 339


>gi|326203377|ref|ZP_08193242.1| histidyl-tRNA synthetase 2 [Clostridium papyrosolvens DSM 2782]
 gi|325986635|gb|EGD47466.1| histidyl-tRNA synthetase 2 [Clostridium papyrosolvens DSM 2782]
          Length = 419

 Score = 40.0 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 75/217 (34%), Gaps = 12/217 (5%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSP 82
           +KR  I+  +R  F    + EI++ ++++     + I  F  E +++   +K   L   P
Sbjct: 22  VKR-EIEKRIRNTFRSYGYYEIETPTIEFFDVFSSEIEHFPQESMVKFFDQKGRILVLRP 80

Query: 83  EF--------SCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
           +         + K        K     + +R  E G   Q EFT        +S  +   
Sbjct: 81  DITVPVARITATKNRDVQLPIKYSYIGNVFRFNEVGGGRQNEFTQAGVEMLGDSSSESDA 140

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFS---EPEYITVAEAFARYANIDLGTTLDNPDQ 191
           + + +     + A  K F  +      F    E    +  +  A    ID    +   + 
Sbjct: 141 EIIAMAINTLKAAGLKEFKIEIGQVEFFKGLAEEAGFSSEDIDAISKQIDKKDLVGVEEI 200

Query: 192 PDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEP 228
            +R+ +  + +Q  +++      +D+        I  
Sbjct: 201 LNRYEISARLKQLILKLTGLFGLADVIQEFKNSSINE 237


>gi|289811882|ref|ZP_06542511.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 52

 Score = 40.0 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 332 LVTGANNINEVIWTP 346
           L+TG +NI +VI  P
Sbjct: 3   LLTGTDNIRDVIAFP 17


>gi|284162694|ref|YP_003401317.1| histidyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284012691|gb|ADB58644.1| histidyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 407

 Score = 40.0 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 45/342 (13%), Positives = 86/342 (25%), Gaps = 54/342 (15%)

Query: 6   SQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS-----LQYSPGNETHIR 60
            +P   RDF       + KR  I+  +R       + E+ + +     L      E  + 
Sbjct: 4   ERPRGTRDFLPDE---MEKRRAIEKVMRRIAESYGYREVLTPTFEHLELFTIKSGEGIVE 60

Query: 61  AFSTELIIQDHIRKPLYLQTSPEF-------SCKKLLAAGEE-KIFCFAHAWRNGEQGCL 112
                   +D   + L L+  PE           + +   +  + + FA+ +R       
Sbjct: 61  EI---YAFKDKSGRDLALR--PELTAPVMRMYVNECMGMPKPLRFYYFANCFRYERPQKG 115

Query: 113 HQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
              EF                 + +++        N K                 +    
Sbjct: 116 RYREFWQFGVELIGSDSYLADVEVISLAYEIMSALNIKFDLHVGHVGLLRHVLRDLDEKV 175

Query: 173 AFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGI 232
           A      ID    LD  D     +     ++    +      +DI         + +   
Sbjct: 176 AGKIMRLID-KKDLDTLDSYINEIGREDLKEVVYPLIELVGDTDIIEEAREIIPDFDFTH 234

Query: 233 NCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR-----HR 287
                          L   +  D    +  + Y     +  A  E L    Q      +R
Sbjct: 235 IEKVAKT-----LDDLGVEFKIDLGIARGLDYYTG--IVFEAYAEGLGAQNQICGGGSYR 287

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRL 329
                       +                  ++G A+GFDR+
Sbjct: 288 LAH----LFGGDD----------------VPATGFALGFDRI 309


>gi|77361705|ref|YP_341280.1| asparagine synthetase AsnA [Pseudoalteromonas haloplanktis TAC125]
 gi|76876616|emb|CAI87838.1| asparagine synthetase A [Pseudoalteromonas haloplanktis TAC125]
          Length = 331

 Score = 40.0 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 90/328 (27%), Gaps = 39/328 (11%)

Query: 29  QSSLREYFVEN-----QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPL 76
            S ++ +F +        IE+ +  L               +  A + + I         
Sbjct: 12  ISQVKHFFSQQLEQQLGLIEVQAPILARVGDGTQDNLSGHENAVAVNIKAIPDSRYEVVH 71

Query: 77  YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDC 136
            L      +      +  E I+    A R  E              Y     +E+++   
Sbjct: 72  SLAKWKRKTLGDHSFSHGEGIYTQMKALRPDEDSLSPIHS-----VYVDQWDWEKVICQD 126

Query: 137 MNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHL 196
                   +   + I++         S+   IT     +             PD   +  
Sbjct: 127 SERTLTTLKQTVEAIYTGIKKTEQFVSDKFGITPFLPSSITFVHSEELREMYPDFSAKQR 186

Query: 197 LYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADP 256
               AQ+ G           +    + +   P+         D+Y        +I   +P
Sbjct: 187 EKAIAQEYGAVFLIGIG-GKLSDGKIHDVRAPDYDDWSTPTCDKY---AGLNGDILVWNP 242

Query: 257 RFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE- 315
                FEL +  I +                 +K++        +    D      L + 
Sbjct: 243 LLEDAFELSSMGIRVSP------------DVLQKQLSMTS--DEDRLEFDWH--KALIQN 286

Query: 316 -MPQSSGIAMGFDRLVMLVTGANNINEV 342
             PQ+ G  +G  RLVML+    +I +V
Sbjct: 287 KFPQTIGGGIGQSRLVMLLLQKPHIGQV 314


>gi|209881101|ref|XP_002141989.1| histidyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209557595|gb|EEA07640.1| histidyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 977

 Score = 40.0 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 73/222 (32%), Gaps = 19/222 (8%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMS--LQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
           ++ RN+I  ++R  F  +  +EID+    L+ +     +         ++D   + L L+
Sbjct: 518 MVIRNVIFDTIRSIFRSHGAVEIDTPIFELRDTLIG-KYGEDSKLIYDLKDQGGEQLSLR 576

Query: 80  TSPEFSCKKLL-AAGEEKI--FCFAHAWRNG--EQGCLHQPEFTMLEW-----YRAHESY 129
                   + + +AG E +  F     +R    +       EF   +      Y A  + 
Sbjct: 577 YDLTVPLARYIASAGLENLKRFQIGKVYRRDEPQMSRGRYREFYQCDLDICGIYEAMTTD 636

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVN------CNPFSEPEYITVAEAFARYANIDLG 183
            +++K   +I+   +      I    + +               I    +     + +  
Sbjct: 637 VEILKIATDILNAFSPWIGSFIIKINHRSLLDGLLIVCGVPKAKIRTICSSIDKLDKESW 696

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
            ++       + L    A + G  +       ++ +++   +
Sbjct: 697 ESVKKEMVTLKGLSEEVADKIGNYIKFSGAPGEVLTKVKQCE 738


>gi|7437594|pir||B71442 probable asparagine-tRNA ligase - Arabidopsis thaliana
 gi|2245089|emb|CAB10511.1| asparagine--tRNA ligase like protein [Arabidopsis thaliana]
 gi|7268482|emb|CAB78733.1| asparagine--tRNA ligase like protein [Arabidopsis thaliana]
          Length = 432

 Score = 40.0 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 5/44 (11%)

Query: 14  FHYRRRP-----FLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
            H R R          RN +  +  ++F E+ F+ + S  +  S
Sbjct: 215 AHLRPRTNTFGAVARVRNTLAYATHKFFQESGFVWVASPIITAS 258


>gi|148643241|ref|YP_001273754.1| histidyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|261349966|ref|ZP_05975383.1| histidine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|148552258|gb|ABQ87386.1| histidyl-tRNA synthetase, HisS [Methanobrevibacter smithii ATCC
           35061]
 gi|288860749|gb|EFC93047.1| histidine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 431

 Score = 40.0 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 47/345 (13%), Positives = 82/345 (23%), Gaps = 52/345 (15%)

Query: 14  FHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSMS-----LQYSPGNETHIRAFS 63
              R  R FL     +R   +S LR  F    + EI +       L  +   E       
Sbjct: 4   TRPRGTRDFLFDEMRERKKAESILRNVFENYAYQEIKTPLFEELKLFTTKSGEE-----I 58

Query: 64  TELIIQDHIRKPLYLQTSPE-------FSCKKLL--AAGEEKIFCFAHAWRNGEQGCLHQ 114
            + +     +    L   PE           +L   A+   K++ +   +R         
Sbjct: 59  VDQLYNFKDKSDRELTLRPEITAPVARLYLNELQKTASKPIKLYYYGSCFRYERPQKGRF 118

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA---NQKIFSFQNVNCNPFSEPEYITVA 171
            +F             Q   + + +   + E        +            +   I  A
Sbjct: 119 RQFWQFGCELIGAKSPQGEAEVIAMCSESIEKLGIPGADVNINHLGIIRGLFKHFNIDTA 178

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG------IRVAHDDTWSDIFSRILIEK 225
                   ID G      +        +  ++        I +  D +       ++   
Sbjct: 179 TQREVMVVIDKGDKDLLKESLTGENPIIDNEELNHVLFKLIDMVGDKSIIKDIEELVAPY 238

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E +  +N    L       ++             R   Y   I         L   +Q 
Sbjct: 239 PESHDALNELEELID---TLASFKMENYTLNLGVARGLDYYTGIVFEV-YIPSLGAQKQV 294

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLV 330
                    K     E                   G A GFDRL+
Sbjct: 295 CGGGTYSLIKIFGGEEVVST---------------GFAFGFDRLM 324


>gi|222445472|ref|ZP_03607987.1| hypothetical protein METSMIALI_01111 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435037|gb|EEE42202.1| hypothetical protein METSMIALI_01111 [Methanobrevibacter smithii
           DSM 2375]
          Length = 431

 Score = 40.0 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 47/345 (13%), Positives = 82/345 (23%), Gaps = 52/345 (15%)

Query: 14  FHYR-RRPFL----LKRNMIQSSLREYFVENQFIEIDSMS-----LQYSPGNETHIRAFS 63
              R  R FL     +R   +S LR  F    + EI +       L  +   E       
Sbjct: 4   TRPRGTRDFLFDEMRERKKAESILRNVFENYAYQEIKTPLFEELKLFTTKSGEE-----I 58

Query: 64  TELIIQDHIRKPLYLQTSPE-------FSCKKLL--AAGEEKIFCFAHAWRNGEQGCLHQ 114
            + +     +    L   PE           +L   A+   K++ +   +R         
Sbjct: 59  VDQLYNFKDKSDRELTLRPEITAPVARLYLNELQKTASKPIKLYYYGSCFRYERPQKGRF 118

Query: 115 PEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA---NQKIFSFQNVNCNPFSEPEYITVA 171
            +F             Q   + + +   + E        +            +   I  A
Sbjct: 119 RQFWQFGCELIGAKSPQGEAEVIAMCSESIEKLGIPGADVNINHLGIIRGLFKHFNIDTA 178

Query: 172 EAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG------IRVAHDDTWSDIFSRILIEK 225
                   ID G      +        +  ++        I +  D +       ++   
Sbjct: 179 TQREVMVVIDKGDKDLLKESLTGENPIIDNEELNHVLFKLIDMVGDKSIIKDIEELVAPY 238

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQR 285
            E +  +N    L       ++             R   Y   I         L   +Q 
Sbjct: 239 PESHDALNELEELID---TLASFKMENYTLNLGVARGLDYYTGIVFEV-YIPSLGAQKQV 294

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLV 330
                    K     E                   G A GFDRL+
Sbjct: 295 CGGGTYSLIKIFGGEEVVST---------------GFAFGFDRLM 324


>gi|262401135|gb|ACY66470.1| aspartyl-tRNA synthetase [Scylla paramamosain]
          Length = 132

 Score = 40.0 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 36/147 (24%), Gaps = 16/147 (10%)

Query: 85  SCKKLLAAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
             +  +A    K+F     +R        H  EF  L+   A   +     +        
Sbjct: 1   YKQMAIAGDFGKVFTIGPVFRAENSNTHRHLTEFVGLDLEMAFTHHYHEALNT------- 53

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
                                  Y     A  +    +    LD P   +        ++
Sbjct: 54  --------IGNMFTEIFRGLRDNYADEIAAVNKQFPAEPFKFLDPPLILECREGVAMLKE 105

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNL 230
           AGI +   +  S    + L   ++   
Sbjct: 106 AGIEMEETEDLSTPNEKFLGRLVKAKY 132


>gi|260582732|ref|ZP_05850519.1| aspartate-ammonia ligase [Haemophilus influenzae NT127]
 gi|260094182|gb|EEW78083.1| aspartate-ammonia ligase [Haemophilus influenzae NT127]
          Length = 330

 Score = 39.6 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 40/342 (11%), Positives = 84/342 (24%), Gaps = 48/342 (14%)

Query: 19  RPFLLKRNMIQSSLREYFVEN-----QFIEIDSMSLQYSPGNETH-------IRAFSTEL 66
           +   + +    S ++  F +N       IE+    L                    + + 
Sbjct: 2   KKTFILQQQEISFVKNTFTQNLIEQLGIIEVQGPILSQVGNGMQDNLSGIEKAVQVNVKC 61

Query: 67  IIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH 126
           I          L      +  +      E +F    A R  E              Y   
Sbjct: 62  IPNAVFEVVHSLAKWKRHTLARFHFKEGEGLFVHMKALRPDEDSLDPTHS-----VYVDQ 116

Query: 127 ESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTL 186
             +E+++ +         E  N    + +       +  +  ++      + + +     
Sbjct: 117 WDWEKVIPEGHRNFTYLKETVNSIYRAIRLTELAVEARFDIPSILPKQITFVHSEDLVKR 176

Query: 187 DNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPES 246
             PD   +       ++ G           +                     D +     
Sbjct: 177 Y-PDLSSKERENAICKEYGAVFLIGIG-GKLSD--------GKPHDGRAPDYDDWTTESE 226

Query: 247 ALANIYPADPRFTKRFELYACNIELCNAC---DELLDPIEQRHRFEKEMQEKKKIYNETY 303
                   D        +   N +L  A       +   E   R + ++        +  
Sbjct: 227 NGYKGLNGD--------ILVWNDQLGKAFELSSMGIRVDESALRLQVDLT----GDEDRL 274

Query: 304 PIDE--DFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
            +D   D L      +P + G  +G  RL ML+    +I EV
Sbjct: 275 KMDWHQDLLN---GKLPLTIGGGIGQSRLAMLLLRKKHIGEV 313


>gi|258513392|ref|YP_003189614.1| Pyrrolysine-tRNA ligase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777097|gb|ACV60991.1| Pyrrolysine-tRNA ligase [Desulfotomaculum acetoxidans DSM 771]
          Length = 278

 Score = 39.6 bits (91), Expect = 0.65,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 18/173 (10%)

Query: 11  NRDFHYRRRPFL-LKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNETHIRAFS 63
           N+  H  +RP +    N + ++LR       F+++ +        L      + H     
Sbjct: 53  NKLRHETKRPAICALENRLAAALR----GAGFVQVATPVILSKKLLGKMTITDEHALFSQ 108

Query: 64  TELIIQDHIRKPLYLQTSPEFS--CKKLLAAGEEK--IFCFAHAWRNGEQGCLHQPEFTM 119
              I ++   +P+    +P      K LL   E+   IF     +R   QG  H  EFTM
Sbjct: 109 VFWIEENKCLRPM---LAPNLYYILKDLLRLWEKPVRIFEIGSCFRKESQGSNHLNEFTM 165

Query: 120 LEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAE 172
           L         EQ  K    + +   +      +  ++     + E   +   +
Sbjct: 166 LNLVEWGLPEEQRQKRISELAKLVMDETGIDEYHLEHAESVVYGETVDVMHRD 218


>gi|42526950|ref|NP_972048.1| histidyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|46396585|sp|P60920|SYH_TREDE RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|41817265|gb|AAS11959.1| histidyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 448

 Score = 39.6 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 61/200 (30%), Gaps = 17/200 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSM------SLQYSPGNETHIRAFSTELIIQDHI 72
           R  L++R  +    R+Y     F+ ID+        L    G ET  + F         +
Sbjct: 24  RALLMER--LVKVFRDY----GFVPIDTPALEYSEILLRKSGGETEKQVFRFSDNGGRDV 77

Query: 73  RKPLYLQTSPEFS---CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
                L           K  +    ++       WR  +       EF   ++       
Sbjct: 78  AMRFDLTVPLARFVAEHKSEIYFPFKRYH-LGKVWRGEKPQAGRYREFLQCDFDTLGSDS 136

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP-EYITVAEAFARYANIDLGTTLDN 188
             +  + + +I+ A        F     +   F+   + + ++E       I        
Sbjct: 137 AAVDFEILRLIKKALNELGVSNFKIHVSHRGIFNRFLKSLNLSEDSEEVLRIVDKLAKIG 196

Query: 189 PDQPDRHLLYLQAQQAGIRV 208
            D+  + L  + ++++  ++
Sbjct: 197 EDEVLKLLTDISSEESAKKI 216


>gi|187250558|ref|YP_001875040.1| phenylalanyl-tRNA synthetase subunit alpha [Elusimicrobium minutum
           Pei191]
 gi|186970718|gb|ACC97703.1| Phenylalanyl-tRNA synthetase, alpha subunit [Elusimicrobium minutum
           Pei191]
          Length = 349

 Score = 39.6 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             MG +RL ML+ G  +I 
Sbjct: 318 FGMGVERLAMLMLGIKDIR 336


>gi|225870013|ref|YP_002745960.1| aspartate--ammonia ligase [Streptococcus equi subsp. equi 4047]
 gi|254806832|sp|C0MBY9|ASNA_STRE4 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|225699417|emb|CAW92893.1| aspartate--ammonia ligase [Streptococcus equi subsp. equi 4047]
          Length = 330

 Score = 39.6 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 77/323 (23%), Gaps = 44/323 (13%)

Query: 34  EYFVEN-QFIEIDSMSLQYSPGN-----ETHIRAFSTELIIQDHIRKPLYLQTSPEFSCK 87
           +Y +     +E+    L                  S  ++  +       +  S     +
Sbjct: 21  QYLIAKLDVVEVQGPILSRVGDGMQDNLSGVENPVSVHVL--NIPNATFEVVHSLAKWKR 78

Query: 88  KLLAAGE----EKIFCFAHAWRNGE--QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIR 141
             LA       E +     A R  E      H       +W +     ++ +      + 
Sbjct: 79  HTLARFGFNEGEGLVVNMKALRPDEDSLDQTHSVYVDQWDWEKVIPDGQRNLAYLKETVE 138

Query: 142 CAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
              +V      + +         P+ IT        A     T  +  +   +    +  
Sbjct: 139 TIYKVIRLTELAVEARYDIEAVLPKKITFIHTEELVARYPDLTPKERENAITKEFDAVFL 198

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
              G  +                  E   G +                     + +    
Sbjct: 199 IGIGGVLPDGKPHDGRAPDYDDWTSESENGYHGLNG------DILVW------NEQLGTA 246

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACLTEMPQS 319
           FEL++  I                   ++++        E    D     L  L   P +
Sbjct: 247 FELFSMGIR------------VDEEALKRQVDI--TGDQERLQFDWHKSLLNGL--FPLT 290

Query: 320 SGIAMGFDRLVMLVTGANNINEV 342
            G  +G  R+ M +    +I EV
Sbjct: 291 IGGGIGQSRMAMFLLRKKHIGEV 313


>gi|19745677|ref|NP_606813.1| asparagine synthetase A [Streptococcus pyogenes MGAS8232]
 gi|19747810|gb|AAL97312.1| hypothetical protein spyM18_0624 [Streptococcus pyogenes MGAS8232]
          Length = 225

 Score = 39.6 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 19/194 (9%), Positives = 49/194 (25%), Gaps = 19/194 (9%)

Query: 72  IRKPLYLQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
                YL  S +F  + +L    +  +      +R       H  +F   E         
Sbjct: 15  FDVDTYLADSMQFHLEYILRLFPKSGVHYLMPTFRGEAVDHRHLSQFYHSECEMEG-DLH 73

Query: 131 QLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD 190
            +M      I+       ++                  ++       ++++       P 
Sbjct: 74  YVMNLVDRYIKFLVSEILREC---------------RDSIFAITKDVSHLESFIDRKIPI 118

Query: 191 QPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN 250
                   +   +      +D+    + + +  +K+  +        +  YP        
Sbjct: 119 ITFEEACTISENEIDSLEYNDEHHFYVLTDVGEKKLMEH--FEGVVWVKNYPCKSVPFYQ 176

Query: 251 IYPADPRFTKRFEL 264
            +  D  F    +L
Sbjct: 177 RFSTDYLFAYNADL 190


>gi|227889249|ref|ZP_04007054.1| aspartate--ammonia ligase [Lactobacillus johnsonii ATCC 33200]
 gi|227850051|gb|EEJ60137.1| aspartate--ammonia ligase [Lactobacillus johnsonii ATCC 33200]
          Length = 336

 Score = 39.6 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 70/263 (26%), Gaps = 40/263 (15%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
            + K+      E ++   +A R + +    H       +W +     E+ ++     ++ 
Sbjct: 89  LALKRYGFGMHEGLYTNMNAIRRDEDLDNFHSIYVDQWDWEKIIAKEERNIETLKTTVKQ 148

Query: 143 AAEVANQKIFS-FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQA 201
             +   +           + +  P  IT           D    L   ++ D+     +A
Sbjct: 149 IFKAIKETEKELSARYPGSTYCLPSDITFITTQE---LEDRWPDLGPEEREDKIAKEKKA 205

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
                         D   R       P+ G                       D      
Sbjct: 206 VFL-------MKIGDRLKRSGK----PHDGRAP------------------DYDDWQLNG 236

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID-EDFLACLTE-MPQS 319
             L+             +         +++   KK    E   +     L  L   +P +
Sbjct: 237 DLLFWYEPLQRKIEISSMGIRVSEESLKEQ--LKKAHTEERSELPFHKML--LEGKLPYT 292

Query: 320 SGIAMGFDRLVMLVTGANNINEV 342
            G  +G  RL ML+ G  +I EV
Sbjct: 293 IGGGIGQSRLCMLLLGKAHIGEV 315


>gi|115377096|ref|ZP_01464311.1| hypothetical protein STIAU_5443 [Stigmatella aurantiaca DW4/3-1]
 gi|115365871|gb|EAU64891.1| hypothetical protein STIAU_5443 [Stigmatella aurantiaca DW4/3-1]
          Length = 22

 Score = 39.6 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 5/17 (29%), Positives = 8/17 (47%)

Query: 335 GANNINEVIWTPFSQSN 351
            A +I +VI  P  +  
Sbjct: 4   DAPSIRDVILFPLLKPQ 20


>gi|300812816|ref|ZP_07093211.1| aspartate--ammonia ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496152|gb|EFK31279.1| aspartate--ammonia ligase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 338

 Score = 39.6 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 87/332 (26%), Gaps = 51/332 (15%)

Query: 27  MIQSSLREYFVENQF-----IE-IDSMS-------LQYSPGNETHIRAFSTELIIQDHIR 73
                +RE F    F     +E I +         L  +        +F+     +  ++
Sbjct: 21  KAIRYIRETFQTE-FGTAMNLERISAPMFVKKSSGLNDNLSGWEKPVSFTLHDGDEGELQ 79

Query: 74  KPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLM 133
               L     ++ K       E +F   +A R          E  +   +  +       
Sbjct: 80  IVHSLAKWKRWALKHYGFGHGEGLFTNMNAIRKD--------EEVLDNLHSVYVDQWDWE 131

Query: 134 KDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
           K      R  A +                   E I   E   R           +  +  
Sbjct: 132 KVIDKSERTEATLRQTVQRI-----------FETIKGMEYHVRAF---YPRAAYHLPEEI 177

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
             +   + +     +   +    I        +E   G          P  +       P
Sbjct: 178 SFVTSEELEARLPSLTPSEREDKICQEEGAVFLEHIGGAL--------PLSKKPHDLRAP 229

Query: 254 ADPRFTKRFELYACNIELCNACD-ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLAC 312
               +T   +L      L  A +   +       R +++++           +D  F   
Sbjct: 230 DYDDWTLNGDLLFWYEPLQRAFEVSSMGIRVDEDRLQEQLKLAGAEDR----LDLPFHQA 285

Query: 313 L-TE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
           L    +P S G  +G  RL ML+ G  +I EV
Sbjct: 286 LLKGDLPYSIGGGIGQSRLCMLLLGKAHIGEV 317


>gi|1022896|gb|AAA91036.1| WI-1 adhesin [Ajellomyces dermatitidis]
          Length = 1146

 Score = 39.6 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 15/201 (7%), Positives = 39/201 (19%), Gaps = 6/201 (2%)

Query: 85  SCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
                L       +       + +               R     +              
Sbjct: 134 YLHDYLCGNGHHPYDCELDSSHEDYSW-PLWFKWCSGHGRHFYDCKWDNDHEKYDWPLWQ 192

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQA 204
                      N + + F E       E + ++         D+  +     L+ +  + 
Sbjct: 193 YWCGSHDKDPYNCDWDKFHEKYD---WELWNKWCKDPYNCEWDSSHEKYDWELWNKWCKD 249

Query: 205 GIRVAHDDTWSDIFSRILIEKIEP--NLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
                 +         +  +  +   N   +       +        + Y  D   +   
Sbjct: 250 PYNCEWNSFHEKYDWELWNKWCKDSYNCEWDSSHEKYDWELWNKWCKDPYNCDWDSSHEK 309

Query: 263 ELYACNIELCNACDELLDPIE 283
             +      CN  D+     E
Sbjct: 310 FDWGLWSHWCNDYDKYPYNCE 330



 Score = 36.2 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 15/149 (10%), Positives = 31/149 (20%), Gaps = 1/149 (0%)

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPF-SEPEYIT 169
           C + P     +       +E   K C +   C  + +++K                E+ +
Sbjct: 394 CTNNPYNCEWDSSHEKYDWELWDKWCKDPYNCDWDSSHEKYDWDLWNKWCKDPYNCEWDS 453

Query: 170 VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPN 229
             E +             N D    H  Y             +   D        ++   
Sbjct: 454 SHEKYDWELWDKWCKDPYNCDWDSSHEKYDWDLWNKWCKDPYNCEWDSSHEKYDWELWDK 513

Query: 230 LGINCCTILDRYPAPESALANIYPADPRF 258
              +           +            F
Sbjct: 514 WCKDPYNCEWDSSHEKYDWKLWDKWCKDF 542


>gi|42519814|ref|NP_965744.1| asparagine synthetase AsnA [Lactobacillus johnsonii NCC 533]
 gi|47115603|sp|P61190|ASNA_LACJO RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|41584104|gb|AAS09710.1| aspartate-ammonia ligase [Lactobacillus johnsonii NCC 533]
          Length = 336

 Score = 39.6 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 32/264 (12%), Positives = 68/264 (25%), Gaps = 42/264 (15%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
            + K+      E ++   +A R + +    H         Y     +E+++      I  
Sbjct: 89  LALKRYGFGMHEGLYTNMNAIRRDEDLDNFHS-------IYVDQWDWEKIIAKEERNIET 141

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
                 Q   + +       +     T                   PD          A+
Sbjct: 142 LKTTVKQIFKAIKETEKELSARYPGSTYRLPSDITFITTQELEDRWPDLAPEEREDKIAK 201

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           +                 + + KI   L  +      R P            D       
Sbjct: 202 EKK--------------AVFLMKIGDKLKRSGKPHDGRAP----------DYDDWELNGD 237

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEK---KKIYNETYPIDEDFLACLTE-MPQ 318
            L+             +         ++++++    ++     + +       L   +P 
Sbjct: 238 LLFWYEPLKRKIEISSMGIRVSEESLKEQLKKAHTEERSDLPFHKM------LLEGKLPY 291

Query: 319 SSGIAMGFDRLVMLVTGANNINEV 342
           + G  +G  RL ML+ G  +I EV
Sbjct: 292 TIGGGIGQSRLCMLLLGKAHIGEV 315


>gi|213585320|ref|ZP_03367146.1| aspartyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 100

 Score = 39.6 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 11/109 (10%)

Query: 85  SCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAA 144
             + L+ +G ++ +     +R+ +     QPEFT ++   +  +  Q+ +    ++R   
Sbjct: 1   FKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLW 60

Query: 145 EVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPD 193
                              +   +T AEA  RY   D     +  +  D
Sbjct: 61  LEVKGVDLG----------DFPVMTFAEAERRY-GSDKPDLRNPMELVD 98


>gi|325474011|gb|EGC77199.1| histidyl-tRNA synthetase [Treponema denticola F0402]
          Length = 448

 Score = 39.6 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 61/200 (30%), Gaps = 17/200 (8%)

Query: 19  RPFLLKRNMIQSSLREYFVENQFIEIDSM------SLQYSPGNETHIRAFSTELIIQDHI 72
           R  L++R  +    R+Y     F+ ID+        L    G ET  + F         +
Sbjct: 24  RALLMER--LVKVFRDY----GFVPIDTPALEYSEILLRKSGGETEKQVFRFSDNGGRDV 77

Query: 73  RKPLYLQTSPEFS---CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
                L           K  +    ++       WR  +       EF   ++       
Sbjct: 78  AMRFDLTVPLARFVAEHKSEIYFPFKRYH-LGKVWRGEKPQAGRYREFLQCDFDTLGSDS 136

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP-EYITVAEAFARYANIDLGTTLDN 188
             +  + + +I+ A        F     +   F+   + + +AE       I        
Sbjct: 137 AAVDFEILRLIKKALNELGVSGFKIHVSHRGIFNRFLKSLNLAEDSEEVLRIVDKLAKIG 196

Query: 189 PDQPDRHLLYLQAQQAGIRV 208
            D+  + L  + ++++  ++
Sbjct: 197 EDEVLKLLTDISSEESAKKI 216


>gi|329668070|gb|AEB94018.1| aspartate-ammonia ligase [Lactobacillus johnsonii DPC 6026]
          Length = 336

 Score = 39.6 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 74/268 (27%), Gaps = 50/268 (18%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
            + K+      E ++   +A R + +    H       +W +     E+ ++     ++ 
Sbjct: 89  LALKRYGFGMHEGLYTNMNAIRRDEDLDNFHSIYVDQWDWEKIIAKEERNIETLKTTVKQ 148

Query: 143 AAEVANQKIFSFQNVNCNPFSEPE----YITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
             +   +     +               +IT  E   R+           PD        
Sbjct: 149 IFKAIKETEKELRARYPGSTYRLPSDITFITTQELEDRW-----------PDLAPEERED 197

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++                 + + KI   L  +      R P            D   
Sbjct: 198 KIAKEKK--------------AVFLMKIGDKLKRSGKPHDGRAP----------DYDDWE 233

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEK---KKIYNETYPIDEDFLACLTE 315
                L+             +         ++++++    ++     + +       L  
Sbjct: 234 LNGDLLFWYEPLKRKIEISSMGIRVSEESLKEQLKKAHTEERSDLPFHKM------LLEG 287

Query: 316 -MPQSSGIAMGFDRLVMLVTGANNINEV 342
            +P + G  +G  RL ML+ G  +I EV
Sbjct: 288 KLPYTIGGGIGQSRLCMLLLGKAHIGEV 315


>gi|170581861|ref|XP_001895871.1| hypothetical protein Bm1_22075 [Brugia malayi]
 gi|170581863|ref|XP_001895872.1| hypothetical protein Bm1_22075 [Brugia malayi]
 gi|158597052|gb|EDP35287.1| hypothetical protein Bm1_22075 [Brugia malayi]
 gi|158597053|gb|EDP35288.1| hypothetical protein Bm1_22075 [Brugia malayi]
          Length = 965

 Score = 39.6 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 59/222 (26%), Gaps = 6/222 (2%)

Query: 92  AGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKI 151
             + K   +    +         P+               +        +  AE      
Sbjct: 715 QWDSKAVDYLRVIQLNAMEDRVVPDHRSWNNAIEFM-ISAIQDRLNETRKQIAEWHGPSF 773

Query: 152 FSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHD 211
           ++       P +E       +   R   I     + +    D  +L    +  G++   +
Sbjct: 774 WARWIYWKTPTAENSLAGTIQEELRNLLIQNPEHIQSLLDDDLTILRRNLEAKGLKELSN 833

Query: 212 DTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIEL 271
           +     +  I  E              D YP  +    +           + +       
Sbjct: 834 ELIRKQWKLIYREHFLERQYQTAIECQDFYPHYKLGFDDTDVDCQGVVLFYRIQKMIDLT 893

Query: 272 CNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLA 311
           CNA  + +   EQR R EKE   K  +    + ID+   +L 
Sbjct: 894 CNALRQQITNTEQR-RLEKE--IKDVLDEWAHDIDKKKEYLT 932


>gi|56695573|ref|YP_165923.1| ATP phosphoribosyltransferase regulatory subunit [Ruegeria pomeroyi
           DSS-3]
 gi|56677310|gb|AAV93976.1| histidyl-tRNA synthetase, homolog [Ruegeria pomeroyi DSS-3]
          Length = 362

 Score = 39.6 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 16/114 (14%)

Query: 22  LLKRNMIQ---SSLREYFVENQFIEIDSMSLQYS------PGNETHIRAFSTELIIQDHI 72
           ++ R  I    + LR  F       +++  LQ +       G +   RA+ T     D +
Sbjct: 1   MITRARILEQAARLRAGFEAAGAQGVETPILQPAETLLDLYGEDIRARAYVT----SDAL 56

Query: 73  RKPLYLQTS---PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           R    L+     P         A   +       +R  E       E+  + + 
Sbjct: 57  RGEQMLRPDFTVPVVQKHMEHGAEPARYTYAGEVFRRQEHDPDRANEYIQVGYE 110


>gi|169841461|ref|ZP_02874574.1| hypothetical protein cdivTM_30198 [candidate division TM7
           single-cell isolate TM7a]
          Length = 17

 Score = 39.2 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 320 SGIAMGFDRLVMLV 333
            G+ +G DRLVML+
Sbjct: 3   GGLGIGIDRLVMLL 16


>gi|15606271|ref|NP_213650.1| phenylalanyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
 gi|6226172|sp|O67087|SYFA_AQUAE RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|2983471|gb|AAC07051.1| phenylalanyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
          Length = 338

 Score = 39.2 bits (90), Expect = 0.85,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
            E   ID DF              MG +RL ML+ G +NI 
Sbjct: 291 LENCGIDTDFYQGFA-------FGMGVERLAMLLFGIDNIK 324


>gi|170683630|ref|YP_001746074.1| asparagine synthetase AsnA [Escherichia coli SMS-3-5]
 gi|226729506|sp|B1LL71|ASNA_ECOSM RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|170521348|gb|ACB19526.1| aspartate--ammonia ligase [Escherichia coli SMS-3-5]
          Length = 330

 Score = 39.2 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMADGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY N+D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPNLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGYAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|50914636|ref|YP_060608.1| asparagine synthetase AsnA [Streptococcus pyogenes MGAS10394]
 gi|73914169|sp|Q5XAY8|ASNA_STRP6 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|50903710|gb|AAT87425.1| Aspartate--ammonia ligase [Streptococcus pyogenes MGAS10394]
          Length = 330

 Score = 39.2 bits (90), Expect = 0.96,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 78/322 (24%), Gaps = 42/322 (13%)

Query: 34  EYFVEN-QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           +Y +     +E+    L               +  + +   I          L      +
Sbjct: 21  QYLIAKLDVVEVQGPILSRVGDGMQDNLSGTENPVSVNVLKIPNATFEVVHSLAKWKRHT 80

Query: 86  CKKLLAAGEEKIFCFAHAWRNGE--QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
             +      E +     A R  E      H       +W +     ++ +      +   
Sbjct: 81  LARFGFNEGEGLVVNMKALRPDEDSLDQTHSVYVDQWDWEKVIPDGKRNLAYLKETVETI 140

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
            +V      + +         P+ IT        A     T  +  +   +    +    
Sbjct: 141 YKVIRLTELAVEARYDIEAVLPKKITFIHTEELVAKYPDLTPKERENAITKEFGAVFLIG 200

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G  +                              D +        +    D        
Sbjct: 201 IGGGLPDG-----------------KPHDGRAPDYDDWTTETENGYHGLNGD-------- 235

Query: 264 LYACNIELCNACD-ELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACLTEMPQSS 320
           L   N +L +A +   +         +++++       +    D     L  L   P + 
Sbjct: 236 LLVWNDQLGSAFELSSMGIRVDEEALKRQVEM--TGDQDRLAFDWHKSLLNGL--FPLTI 291

Query: 321 GIAMGFDRLVMLVTGANNINEV 342
           G  +G  R+VM +    +I EV
Sbjct: 292 GGGIGQSRMVMFLLRKKHIGEV 313


>gi|297518533|ref|ZP_06936919.1| asparagine synthetase AsnA [Escherichia coli OP50]
          Length = 330

 Score = 39.2 bits (90), Expect = 0.97,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 83/324 (25%), Gaps = 50/324 (15%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +     
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWA 142

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                  +           P+ I    +    +         +     + L  +     G
Sbjct: 143 GIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLDAKGHERAIAKDLGAVFLVGIG 202

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY--PAPESALANIYPA---DPRFTK 260
            +++                   +         D +  P+              +P    
Sbjct: 203 GKLSDG-----------------HCHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLED 245

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE-MPQ 318
            FEL +  I                   + ++        +   ++      L    MPQ
Sbjct: 246 AFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGEMPQ 289

Query: 319 SSGIAMGFDRLVMLVTGANNINEV 342
           + G  +G  RL ML+    +I +V
Sbjct: 290 TIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|146304669|ref|YP_001191985.1| prolyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|172046942|sp|A4YI09|SYP_METS5 RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|145702919|gb|ABP96061.1| prolyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 480

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 41/325 (12%), Positives = 82/325 (25%), Gaps = 49/325 (15%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGN-----ETHIRAFS-----TELIIQDH 71
              R  + + +R+   E    E+    L   P         HI+ F           +D 
Sbjct: 44  FKIRQNVTTLIRKLLDETGHEEVLFPLL--IPETLLKKEAEHIKGFEKEVFWVTHGGEDE 101

Query: 72  IRKPLYLQTSPEFSCKKLLAAGEEKI-------FCFAHAWRNGEQGCLHQPEFTMLEWYR 124
           + +   L+ + E +   + +   +         +     +R   +          L    
Sbjct: 102 LEERFALRPTSEVAITLMESLWIKGYSQLPRKFYQIVSVFRYETKATRPMIRVREL---- 157

Query: 125 AHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGT 184
              S  +           AA     +     +   +    P  I+    + ++A  +   
Sbjct: 158 ---STFKEAHTVHETFEDAARQV-DEAVEIYSKFFDILGIPYLISRRPEWDKFAGAEYTI 213

Query: 185 TLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP 244
            LD      R L    A   G            F++ +  K++   G +       Y   
Sbjct: 214 ALDTIMPDGRALQIGTAHHLGQH----------FTKAMDYKVQRADGSHVHPHQTSYGIS 263

Query: 245 ---ESALANIYPADPR--FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIY 299
               + + +I   D               I       E       ++  E E   K    
Sbjct: 264 DRVIATVISINGDDHGPILPPVVAPIEGVIIPIPGKSEEDTEKINKYAMEVESVLKNSGI 323

Query: 300 NETYPIDED-------FLACLTEMP 317
                  ED       ++  L  +P
Sbjct: 324 RVALDASEDKTPGEKYYIWELKGVP 348


>gi|317057285|ref|YP_004105752.1| aspartate/ammonia ligase [Ruminococcus albus 7]
 gi|315449554|gb|ADU23118.1| aspartate/ammonia ligase [Ruminococcus albus 7]
          Length = 336

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%)

Query: 293 QEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
           Q K+    +    D   +     +P + G  +G  RL ML+    +I EV
Sbjct: 266 QLKEAGAEDRMQYDYHKMIANGTLPLTIGGGIGQSRLCMLLLEKAHIGEV 315


>gi|147773506|emb|CAN66785.1| hypothetical protein VITISV_013512 [Vitis vinifera]
          Length = 410

 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 24/97 (24%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNE-----------THIRAFSTELII 68
             RN +  +  ++F EN F+ I S  +  S      E                 + + I 
Sbjct: 22  RVRNALAYATHKFFQENGFVWISSPIITASDCEGAGEQFCVTTLIPSSREATDSTVDAIP 81

Query: 69  ----------QDHIRKPLYLQTSPEFSCKKLLAAGEE 95
                     QD   KP +L  S + + +    A  +
Sbjct: 82  KAKDGLIDWSQDFFGKPAFLTVSGQLNAETYATALSD 118


>gi|254172046|ref|ZP_04878722.1| threonyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033942|gb|EEB74768.1| threonyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 624

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/282 (11%), Positives = 68/282 (24%), Gaps = 44/282 (15%)

Query: 40  QFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPE----FSCKKLLAAG 93
             +E+++  +     P  E ++  F     I     K  +L+ +         K  + + 
Sbjct: 252 GAMEVETPIMYDFEHPALEKYLNRFPARQYIVKSGDKKFFLRFAACFGQFLIKKDAIISY 311

Query: 94  EEKIFCFAHAWRN--------GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                      R            G      FTM + +   +  +Q M +     + + E
Sbjct: 312 RHLPLRMYELTRYSFRREKSGELSGLRRLRAFTMPDMHTVAKDLKQAMDEFKKQYKLSME 371

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
           V      +  +               E                    +R  +   A+  G
Sbjct: 372 VLRGVGLTPDDYEV--AIRFTRDFWEE--------------------NRDFIVELAKIIG 409

Query: 206 IRVAHDDTWSDIFSRI--LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
             V  +      F  I         NL         +     +    I   D    +R+ 
Sbjct: 410 KPVLIEMWDQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERFGITYYDEEGKERYP 469

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           L                        EK+ + + +     +P+
Sbjct: 470 LILHCSPSG------AIERVMYAILEKQAKLQAQGKKPAFPL 505


>gi|193063804|ref|ZP_03044891.1| aspartate--ammonia ligase [Escherichia coli E22]
 gi|194428090|ref|ZP_03060634.1| aspartate--ammonia ligase [Escherichia coli B171]
 gi|218556315|ref|YP_002389229.1| asparagine synthetase AsnA [Escherichia coli IAI1]
 gi|260846471|ref|YP_003224249.1| asparagine synthetase A [Escherichia coli O103:H2 str. 12009]
 gi|260857841|ref|YP_003231732.1| asparagine synthetase A [Escherichia coli O26:H11 str. 11368]
 gi|260870478|ref|YP_003236880.1| asparagine synthetase A [Escherichia coli O111:H- str. 11128]
 gi|226729502|sp|B7M5A0|ASNA_ECO8A RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|192930519|gb|EDV83126.1| aspartate--ammonia ligase [Escherichia coli E22]
 gi|194413848|gb|EDX30126.1| aspartate--ammonia ligase [Escherichia coli B171]
 gi|218363084|emb|CAR00722.1| asparagine synthetase A [Escherichia coli IAI1]
 gi|257756490|dbj|BAI27992.1| asparagine synthetase A [Escherichia coli O26:H11 str. 11368]
 gi|257761618|dbj|BAI33115.1| asparagine synthetase A [Escherichia coli O103:H2 str. 12009]
 gi|257766834|dbj|BAI38329.1| asparagine synthetase A [Escherichia coli O111:H- str. 11128]
 gi|320201223|gb|EFW75804.1| Aspartate--ammonia ligase [Escherichia coli EC4100B]
 gi|323155425|gb|EFZ41608.1| aspartate--ammonia ligase [Escherichia coli EPECa14]
 gi|323161004|gb|EFZ46923.1| aspartate--ammonia ligase [Escherichia coli E128010]
 gi|323177764|gb|EFZ63348.1| aspartate--ammonia ligase [Escherichia coli 1180]
          Length = 330

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEERLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|50365183|ref|YP_053608.1| histidyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81695673|sp|Q6F199|SYH_MESFL RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|50363739|gb|AAT75724.1| histidyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 457

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 6/20 (30%), Positives = 14/20 (70%)

Query: 318 QSSGIAMGFDRLVMLVTGAN 337
            +SG A+G +R++M+++   
Sbjct: 337 PASGFAIGIERIMMILSDQE 356


>gi|294494967|ref|YP_003541460.1| Pyrrolysyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292665966|gb|ADE35815.1| Pyrrolysyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 404

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 12/110 (10%)

Query: 24  KRNMIQSSLRE---YFVENQFIEIDSMSLQYSP----GNETHIRAFSTELIIQDHIRKPL 76
           +R+ +    R+   + +E  F+E+ +  L  +        T       ++   D     L
Sbjct: 188 RRHQLAQLERDISLFLIEKGFMEVRTSVLIPAKFIERMGITEEDPLYKQIFRVDE-NTCL 246

Query: 77  YLQTSPEFSCKKL----LAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEW 122
               +P           +     KIF     +R    G  H  EFTM+ +
Sbjct: 247 RPMLAPGLYNYLHNFDNIMPDPLKIFEIGTCYRKESDGKEHLEEFTMVNF 296


>gi|254486305|ref|ZP_05099510.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter sp.
           GAI101]
 gi|214043174|gb|EEB83812.1| ATP phosphoribosyltransferase regulatory subunit [Roseobacter sp.
           GAI101]
          Length = 359

 Score = 38.9 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 34/112 (30%), Gaps = 16/112 (14%)

Query: 24  KRNMIQSS---LREYFVENQFIEIDSMSLQYS------PGNETHIRAFSTELIIQDHIRK 74
            R+   +    LR  F E   + ++   LQ +       G +   RA+ T     D +R 
Sbjct: 3   TRSQTLAKAGMLRMTFEEQGAVVVEPPILQPAETLLDLYGEDIRARAYVT----SDALRG 58

Query: 75  PLYLQTS---PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
              L+     P         A   +       +R  E       EF  + + 
Sbjct: 59  EQMLRPDYTLPVVQMHMAHGADPARYTYAGEVFRRQESDPARANEFIQVGYE 110


>gi|157156517|ref|YP_001465234.1| asparagine synthetase AsnA [Escherichia coli E24377A]
 gi|191169198|ref|ZP_03030954.1| aspartate--ammonia ligase [Escherichia coli B7A]
 gi|209921225|ref|YP_002295309.1| asparagine synthetase AsnA [Escherichia coli SE11]
 gi|218697470|ref|YP_002405137.1| asparagine synthetase AsnA [Escherichia coli 55989]
 gi|300925574|ref|ZP_07141447.1| aspartate--ammonia ligase [Escherichia coli MS 182-1]
 gi|301324955|ref|ZP_07218510.1| aspartate--ammonia ligase [Escherichia coli MS 78-1]
 gi|309795699|ref|ZP_07690114.1| aspartate--ammonia ligase [Escherichia coli MS 145-7]
 gi|166988298|sp|A7ZTV5|ASNA_ECO24 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|226729505|sp|B6I3Y1|ASNA_ECOSE RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|254806828|sp|B7L891|ASNA_ECO55 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|157078547|gb|ABV18255.1| aspartate--ammonia ligase [Escherichia coli E24377A]
 gi|190900771|gb|EDV60564.1| aspartate--ammonia ligase [Escherichia coli B7A]
 gi|209914484|dbj|BAG79558.1| asparagine synthase A [Escherichia coli SE11]
 gi|218354202|emb|CAV00838.1| asparagine synthetase A [Escherichia coli 55989]
 gi|300418348|gb|EFK01659.1| aspartate--ammonia ligase [Escherichia coli MS 182-1]
 gi|300848126|gb|EFK75886.1| aspartate--ammonia ligase [Escherichia coli MS 78-1]
 gi|308120578|gb|EFO57840.1| aspartate--ammonia ligase [Escherichia coli MS 145-7]
 gi|323944220|gb|EGB40300.1| aspartate-ammonia ligase [Escherichia coli H120]
 gi|324018458|gb|EGB87677.1| aspartate--ammonia ligase [Escherichia coli MS 117-3]
 gi|324115900|gb|EGC09826.1| aspartate-ammonia ligase [Escherichia coli E1167]
          Length = 330

 Score = 38.9 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEERLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|332297974|ref|YP_004439896.1| Histidyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332181077|gb|AEE16765.1| Histidyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 435

 Score = 38.9 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 52/162 (32%), Gaps = 18/162 (11%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSMSL--------QYSPGNETHIRAFSTEL 66
           R FL    + R+ +   L   F    ++ ID+  L        + S   E  +  F    
Sbjct: 14  RDFLPEAEITRSALIEKLTAAFRSFGYVPIDTPVLEYAEILLRKSSGETEKQVFRFEDNG 73

Query: 67  IIQDHIRKPL---YLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
                +R  L   + + + E   K  L    ++    A  WR  +       EF   ++ 
Sbjct: 74  GRDVALRFDLTVPFARFTAE--HKDELYFPFKRYH-IAKVWRGEKPQAGRYREFVQCDFD 130

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
                      + + +++ A  V   +  + +  +   F+  
Sbjct: 131 CVGSDSAACDFEILALMKTALSVIGVEDVTIRMSHRGVFNRF 172


>gi|307596075|ref|YP_003902392.1| phenylalanyl-tRNA synthetase subunit alpha [Vulcanisaeta distributa
           DSM 14429]
 gi|307551276|gb|ADN51341.1| phenylalanyl-tRNA synthetase, alpha subunit [Vulcanisaeta
           distributa DSM 14429]
          Length = 523

 Score = 38.9 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 6/24 (25%), Positives = 11/24 (45%), Gaps = 2/24 (8%)

Query: 322 IAMGFDRLVMLVTGANNINEVIWT 345
             MG DR+ M++    +I +    
Sbjct: 479 FGMGLDRIAMILMNIEDIRD--LF 500


>gi|331003925|ref|ZP_08327414.1| aspartate-ammonia ligase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411945|gb|EGG91345.1| aspartate-ammonia ligase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 335

 Score = 38.9 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 63/249 (25%), Gaps = 36/249 (14%)

Query: 95  EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSF 154
                     R+ E   LH         Y     +E++++     +    +         
Sbjct: 101 GLYTNMNAIRRDEELDNLHS-------CYVDQWDWEKVIRKEDRTVEVLEDTVRTIFKVI 153

Query: 155 QNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTW 214
           +++    + +            Y        L  PD+  +    L +++ G         
Sbjct: 154 KHMEHEVWYKYPEAVNHLPEDIYFITSEELRLRYPDKTPKERECLISKEYG--------- 204

Query: 215 SDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNA 274
                      IE   G                       D        L+      C  
Sbjct: 205 --------CVFIEKIGGALGDGKPHD--------GRAPDYDDWELNGDILFWFENLNCAV 248

Query: 275 CDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLV 333
               +         E +++    +  +  P  +  LA     +P + G  +G  RL ML+
Sbjct: 249 EISSMGIRVDEAAMEAQLKIANALDRKNLPFHKALLA---GELPYTIGGGIGQSRLCMLL 305

Query: 334 TGANNINEV 342
               ++ EV
Sbjct: 306 LNKAHVGEV 314


>gi|253775621|ref|YP_003038452.1| asparagine synthetase AsnA [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254163695|ref|YP_003046803.1| asparagine synthetase AsnA [Escherichia coli B str. REL606]
 gi|242379282|emb|CAQ34089.1| asparagine synthetase A [Escherichia coli BL21(DE3)]
 gi|253326665|gb|ACT31267.1| aspartate/ammonia ligase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253975596|gb|ACT41267.1| asparagine synthetase AsnA [Escherichia coli B str. REL606]
 gi|253979753|gb|ACT45423.1| asparagine synthetase AsnA [Escherichia coli BL21(DE3)]
          Length = 330

 Score = 38.9 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHCHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|323359435|ref|YP_004225831.1| histidyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323275806|dbj|BAJ75951.1| histidyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 424

 Score = 38.9 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 27/131 (20%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNETHIRAFSTELII 68
           R FL     +R  + + +RE +  + F EI++        L    G +    +FS     
Sbjct: 11  RDFLPADKARRERVLAVIRERYRAHGFDEIETPVMEDYDRLHAGIGGDNEKLSFSILKRG 70

Query: 69  QDH-----------------IRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGC 111
            D                  +R  L +  +  ++  +       +    A  WR      
Sbjct: 71  MDAEAIRAAADDPAALADLGLRYDLTVPLARFYATNRAQLPAVFRSIQMAPVWRAERPQK 130

Query: 112 LHQPEFTMLEW 122
               +F   + 
Sbjct: 131 GRYRQFLQCDI 141


>gi|196232411|ref|ZP_03131264.1| phenylalanyl-tRNA synthetase, alpha subunit [Chthoniobacter flavus
           Ellin428]
 gi|196223483|gb|EDY18000.1| phenylalanyl-tRNA synthetase, alpha subunit [Chthoniobacter flavus
           Ellin428]
          Length = 337

 Score = 38.9 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
              G DRL M+++G  +I 
Sbjct: 306 FGFGLDRLAMIMSGTPDIR 324


>gi|146320303|ref|YP_001200014.1| asparagine synthetase AsnA [Streptococcus suis 98HAH33]
 gi|253751310|ref|YP_003024451.1| aspartate--ammonia ligase [Streptococcus suis SC84]
 gi|253753211|ref|YP_003026351.1| aspartate--ammonia ligase [Streptococcus suis P1/7]
 gi|253755034|ref|YP_003028174.1| aspartate--ammonia ligase [Streptococcus suis BM407]
 gi|145691109|gb|ABP91614.1| Asparagine synthetase A [Streptococcus suis 98HAH33]
 gi|251815599|emb|CAZ51183.1| aspartate--ammonia ligase [Streptococcus suis SC84]
 gi|251817498|emb|CAZ55240.1| aspartate--ammonia ligase [Streptococcus suis BM407]
 gi|251819456|emb|CAR44959.1| aspartate--ammonia ligase [Streptococcus suis P1/7]
 gi|292557880|gb|ADE30881.1| aspartate--ammonia ligase [Streptococcus suis GZ1]
 gi|319757592|gb|ADV69534.1| asparagine synthetase AsnA [Streptococcus suis JS14]
          Length = 330

 Score = 38.9 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/322 (11%), Positives = 79/322 (24%), Gaps = 42/322 (13%)

Query: 34  EYF-VENQFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           +Y   + + +E+    L               +    + +LI          L      +
Sbjct: 21  QYLKDKLEIVEVQGPILSRVGDGMQDNLSGVENAVTVNVKLIPDATYEVVHSLAKWKRHT 80

Query: 86  CKKLLAAGEEKIFCFAHAWRNGE--QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
             +      E +F    A R  E     +H       +W +      + +      +   
Sbjct: 81  LARFGFHEGEGLFVHMKALRPDEDSLDPIHSVYVDQWDWEKVIPDGRRNLAYLKETVEQI 140

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
            +       + +         P+ IT         N    T  +  +   +    +    
Sbjct: 141 YKAIRLTELAVEARYDIESVLPKKITFIHTEDLVKNFPDLTPKERENVVAKEYGAVFLIG 200

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G  +A                  P+ G          P+                   +
Sbjct: 201 IGGELADGK---------------PHDGRAPDYDDWTSPSEAGYKGL----------NGD 235

Query: 264 LYACNIELCNACD-ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS- 320
           +   N  L +A +   +         ++++        +    D      L   +   S 
Sbjct: 236 ILVWNEALGSAFELSSMGIRVDEEALKRQVAI--TGDEDRLEFDWH--RALLNGLFPLSI 291

Query: 321 GIAMGFDRLVMLVTGANNINEV 342
           G  +G  RL M +    +I EV
Sbjct: 292 GGGIGQSRLAMFLLRKKHIGEV 313


>gi|58338140|ref|YP_194725.1| asparagine synthetase AsnA [Lactobacillus acidophilus NCFM]
 gi|227902679|ref|ZP_04020484.1| aspartate--ammonia ligase [Lactobacillus acidophilus ATCC 4796]
 gi|75507531|sp|Q5FHY0|ASNA_LACAC RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|58255457|gb|AAV43694.1| aspartate-ammonia ligase [Lactobacillus acidophilus NCFM]
 gi|227869585|gb|EEJ77006.1| aspartate--ammonia ligase [Lactobacillus acidophilus ATCC 4796]
          Length = 336

 Score = 38.9 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 38/262 (14%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
            + K+      E ++   +A R + +    H       +W                II  
Sbjct: 89  LALKRYGFGMHEGLYTNMNAIRRDEDLDNFHSIYVDQWDWE--------------KIIAK 134

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH-LLYLQA 201
                +    +   +     +  + +T     + Y   D  + +   +  DR   L  + 
Sbjct: 135 EERNTDTLEVTVMKIFKAIKATEKLVTARYPGSTYRLGDHVSFITTQELEDRWPELSPEE 194

Query: 202 QQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKR 261
           ++  I       +       L    +P+ G                       D      
Sbjct: 195 RENKIAKEEKAVFIMKIGDKLKRSGKPHDGRAP------------------DYDDWQLNG 236

Query: 262 FELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSS 320
             ++             +          +++++      E  P  +     L   +P + 
Sbjct: 237 DLIFWYEPLQSKIEVSSMGIRVSEESLREQLKKAHCEDREKLPFHKML---LEGKLPYTI 293

Query: 321 GIAMGFDRLVMLVTGANNINEV 342
           G  +G  RL ML+ G  +I EV
Sbjct: 294 GGGIGQSRLCMLLLGKAHIGEV 315


>gi|325967904|ref|YP_004244096.1| phenylalanyl-tRNA synthetase subunit alpha [Vulcanisaeta
           moutnovskia 768-28]
 gi|323707107|gb|ADY00594.1| phenylalanyl-tRNA synthetase subunit alpha [Vulcanisaeta
           moutnovskia 768-28]
          Length = 524

 Score = 38.9 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 6/24 (25%), Positives = 11/24 (45%), Gaps = 2/24 (8%)

Query: 322 IAMGFDRLVMLVTGANNINEVIWT 345
             MG DR+ M++    +I +    
Sbjct: 479 FGMGLDRIAMILMNIEDIRD--LF 500


>gi|111225103|ref|YP_715897.1| histidyl-tRNA synthetase [Frankia alni ACN14a]
 gi|111152635|emb|CAJ64376.1| Histidyl-tRNA synthetase (Histidine--tRNA ligase) [Frankia alni
           ACN14a]
          Length = 440

 Score = 38.9 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 36/147 (24%), Gaps = 21/147 (14%)

Query: 2   HQIPSQ--PWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM------SLQYSP 53
             +P    P W  +        + +R     ++R  F    F  +++        L    
Sbjct: 8   RPLPVSGFPEWLPEVR-----IVEQRW--LDTIRATFERYGFCSVETPSVEALDVLTAKG 60

Query: 54  GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKI------FCFAHAWRNG 107
                +          D     L L         + +AA   ++      +     WR  
Sbjct: 61  ETSQEVYTLRRLQADADDDSARLGLHFDLTVPFARYVAAHFNELVFPFKRYQMQRVWRGE 120

Query: 108 EQGCLHQPEFTMLEWYRAHESYEQLMK 134
                   EFT  +    +     L  
Sbjct: 121 RPQEGRFREFTQCDIDVINVDRVPLHF 147


>gi|147867073|emb|CAN82652.1| hypothetical protein VITISV_000561 [Vitis vinifera]
          Length = 572

 Score = 38.9 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/139 (10%), Positives = 35/139 (25%), Gaps = 8/139 (5%)

Query: 107 GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPE 166
                 H  EF M+E   A    +  M      ++   +                  E  
Sbjct: 340 HSHTSRHLAEFWMVEPEIAFADLKDDMNCAEAYVKFLCQWLPDNCIDD--------MEFM 391

Query: 167 YITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKI 226
                +    +  +      +     +   L  +A +   +  +   W    +    + +
Sbjct: 392 AKXFDKGSIDHLRMVASMPFERISYAEAIKLLEEAVKKDKKFENKVEWGIDLASEHDQIL 451

Query: 227 EPNLGINCCTILDRYPAPE 245
             + G  C +   R P+  
Sbjct: 452 ASSQGHRCFSQTVRVPSSL 470


>gi|330833959|ref|YP_004408687.1| glycyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566098|gb|AEB94203.1| glycyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 571

 Score = 38.9 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 3/38 (7%)

Query: 23 LKRNMIQSSLREYFVENQ---FIEIDSMSLQYSPGNET 57
            RN I    R  FVE      +EI++  +  S   E 
Sbjct: 39 RIRNKIVQMWRRIFVEENSEFVVEIETPMITPSKVLEA 76


>gi|302035779|ref|YP_003796101.1| phenylalanyl-tRNA synthetase subunit alpha [Candidatus Nitrospira
           defluvii]
 gi|300603843|emb|CBK40175.1| Phenylalanyl-tRNA synthetase, alpha subunit [Candidatus Nitrospira
           defluvii]
          Length = 514

 Score = 38.5 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 6/24 (25%), Positives = 12/24 (50%), Gaps = 2/24 (8%)

Query: 322 IAMGFDRLVMLVTGANNINEVIWT 345
             +G DR+ M+  G ++I +    
Sbjct: 479 WGLGLDRMAMVALGIHDIRD--LF 500


>gi|170767060|ref|ZP_02901513.1| aspartate--ammonia ligase [Escherichia albertii TW07627]
 gi|170124498|gb|EDS93429.1| aspartate--ammonia ligase [Escherichia albertii TW07627]
          Length = 330

 Score = 38.5 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 86/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDDERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY  +D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPGLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGYAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLELEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLQHIGQV 313


>gi|219670854|ref|YP_002461289.1| tRNA synthetase class II (G H P and S) [Desulfitobacterium
           hafniense DCB-2]
 gi|219541114|gb|ACL22853.1| tRNA synthetase class II (G H P and S) [Desulfitobacterium
           hafniense DCB-2]
          Length = 279

 Score = 38.5 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 17/125 (13%)

Query: 36  FVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL--------QTSPEFS-C 86
             +  F+++ + ++              T         +  +L          +P     
Sbjct: 75  LHQQGFVQVVTPTIITKSALAK-----MTIGEDHPLFSQVFWLDGKKCLRPMLAPNLYTL 129

Query: 87  KKLLAAGEE---KIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
            + L    +   +IF     +R   QG  H  EFTML         E+  +   ++ R  
Sbjct: 130 WRELERLWDKPIRIFEIGTCYRKESQGAQHLNEFTMLNLTELGTPLEERHQRLEDMARWV 189

Query: 144 AEVAN 148
            E A 
Sbjct: 190 LEAAG 194


>gi|301118244|ref|XP_002906850.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262108199|gb|EEY66251.1| aspartyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 174

 Score = 38.5 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 28/105 (26%), Gaps = 8/105 (7%)

Query: 66  LIIQDHIRKPLYLQTSPEFSCKKLL-AAGEEKIFCFAHAWRNGEQ-GCLHQPEFTMLEWY 123
                +  +   L  SP+         A  E++F     +R        H  E   L+  
Sbjct: 29  YFTLKYFDQDATLAQSPQTYKHMACDVASLERVFEIGPGFRAETSNTHRHMCELVGLDLE 88

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYI 168
                   +      ++    +   + I    + N     +  ++
Sbjct: 89  MT------IKAHYHKVLTEKEKWLGRLIKEKYDTNFYILDKFRWL 127


>gi|152972653|ref|YP_001337799.1| asparagine synthetase AsnA [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238892259|ref|YP_002916993.1| asparagine synthetase AsnA [Klebsiella pneumoniae NTUH-K2044]
 gi|166219928|sp|A6TG48|ASNA_KLEP7 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|150957502|gb|ABR79532.1| asparagine synthetase AsnA [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238544575|dbj|BAH60926.1| asparagine synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 330

 Score = 38.5 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 38/322 (11%), Positives = 82/322 (25%), Gaps = 49/322 (15%)

Query: 37  VENQFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
            +   IE+ +  L     G + ++     + ++ ++        +  S     ++ L   
Sbjct: 25  EKLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKTLPDAQFEVVHSLAKWKRQTLGQH 84

Query: 94  ----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
                E ++    A R        +H       +W R     E+ +      +       
Sbjct: 85  DFSAGEGLYTHMKALRPDEDRLTPIHSVYVDQWDWERVMGDEERHVGTLKATVEAIYAGI 144

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
                +           PE I    +    +               + L  +     G +
Sbjct: 145 KATELAVSQEFGLTPFLPEQIHFVHSQELLSRYPELDAKGRERAIAKELGAVFLIGIGGK 204

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD-----PRFTKRF 262
           +A                             D +    S        D     P     F
Sbjct: 205 LADG-----------------KRHDVRAPDYDDWSTEVSEGFAGLNGDILVWNPVLEDAF 247

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE-MPQSS 320
           E+ +  I                   ++++        +   ++      L    MPQ+ 
Sbjct: 248 EISSMGIR------------VDAEALKRQLAL--TGDEDRLKLEWH--QALLRGEMPQTI 291

Query: 321 GIAMGFDRLVMLVTGANNINEV 342
           G  +G  RL ML+   ++I +V
Sbjct: 292 GGGIGQSRLTMLLLQLDHIGQV 313


>gi|323965812|gb|EGB61263.1| aspartate-ammonia ligase [Escherichia coli M863]
 gi|327250896|gb|EGE62598.1| aspartate--ammonia ligase [Escherichia coli STEC_7v]
          Length = 330

 Score = 38.5 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSIYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  ARY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLARYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|146318121|ref|YP_001197833.1| asparagine synthetase AsnA [Streptococcus suis 05ZYH33]
 gi|145688927|gb|ABP89433.1| aspartate--ammonia ligase [Streptococcus suis 05ZYH33]
          Length = 317

 Score = 38.5 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 36/318 (11%), Positives = 77/318 (24%), Gaps = 41/318 (12%)

Query: 37  VENQFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKL 89
            + + +E+    L               +    + +LI          L      +  + 
Sbjct: 12  DKLEIVEVQGPILSRVGDGMQDNLSGVENAVTVNVKLIPDATYEVVHSLAKWKRHTLARF 71

Query: 90  LAAGEEKIFCFAHAWRNGE--QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
                E +F    A R  E     +H       +W +      + +      +    +  
Sbjct: 72  GFHEGEGLFVHMKALRPDEDSLDPIHSVYVDQWDWEKVIPDGRRNLAYLKETVEQIYKAI 131

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
                + +         P+ IT         N    T  +  +   +    +     G  
Sbjct: 132 RLTELAVEARYDIESVLPKKITFIHTEDLVKNFPDLTPKERENVVAKEYGAVFLIGIGGE 191

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
           +A                  P+ G          P+                   ++   
Sbjct: 192 LADGK---------------PHDGRAPDYDDWTSPSEAGYKGL----------NGDILVW 226

Query: 268 NIELCNACD-ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS-GIAM 324
           N  L +A +   +         ++++        +    D      L   +   S G  +
Sbjct: 227 NEALGSAFELSSMGIRVDEEALKRQVAI--TGDEDRLEFDWH--RALLNGLFPLSIGGGI 282

Query: 325 GFDRLVMLVTGANNINEV 342
           G  RL M +    +I EV
Sbjct: 283 GQSRLAMFLLRKKHIGEV 300


>gi|262040351|ref|ZP_06013597.1| aspartate-ammonia ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042292|gb|EEW43317.1| aspartate-ammonia ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 330

 Score = 38.5 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/322 (11%), Positives = 82/322 (25%), Gaps = 49/322 (15%)

Query: 37  VENQFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
            +   IE+ +  L     G + ++     + ++ ++        +  S     ++ L   
Sbjct: 25  EKLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKTLPDAQFEVVHSLAKWKRQTLGQH 84

Query: 94  ----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
                E ++    A R        +H       +W R     E+ +      +       
Sbjct: 85  DFSAGEGLYTHMKALRPDEDRLTPIHSVYVDQWDWERVMGDEERHVGTLKATVEAIYAGI 144

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
                +           PE I    +    +               + L  +     G +
Sbjct: 145 KATELAVSQEFGLTPFLPEQIHFVHSQELLSRYPELDAKGRERAIAKELGAVFLIGIGGK 204

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPAD-----PRFTKRF 262
           +A                             D +    S        D     P     F
Sbjct: 205 LADG-----------------KRHDVRAPDYDDWSTEVSEGFAGLNGDILVWNPVLEDAF 247

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE-MPQSS 320
           E+ +  I                   ++++        +   ++      L    MPQ+ 
Sbjct: 248 EISSMGIR------------VDAEALKRQLAL--TGDEDRLKLEWH--QALLRGEMPQTI 291

Query: 321 GIAMGFDRLVMLVTGANNINEV 342
           G  +G  RL ML+   ++I +V
Sbjct: 292 GGGIGQSRLTMLLLQLDHIGQV 313


>gi|14590544|ref|NP_142612.1| phenylalanyl-tRNA synthetase subunit alpha [Pyrococcus horikoshii
           OT3]
 gi|12229967|sp|O58391|SYFA_PYRHO RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|3257066|dbj|BAA29749.1| 499aa long hypothetical phenylalanyl-tRNA synthetase subunit alpha
           chain [Pyrococcus horikoshii OT3]
          Length = 499

 Score = 38.5 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DRL M   G ++I 
Sbjct: 464 WGIGIDRLAMFKLGVDDIR 482


>gi|163782648|ref|ZP_02177645.1| S-adenosyl-L-homocysteine hydrolase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882221|gb|EDP75728.1| S-adenosyl-L-homocysteine hydrolase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 336

 Score = 38.5 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 300 NETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
            E+  ID D               MG +RL ML+ G +NI 
Sbjct: 290 LESCGIDTDLYQGFA-------FGMGVERLAMLLFGIDNIK 323


>gi|332995991|gb|EGK15618.1| aspartate--ammonia ligase [Shigella flexneri VA-6]
          Length = 330

 Score = 38.5 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 82/324 (25%), Gaps = 50/324 (15%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +     
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWA 142

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                  +           P+ I    +    +               + L  +     G
Sbjct: 143 GIKATEAAVNEEFGLAPFLPDQIHFVHSQELLSRYPDLDAKGRERAIAKDLGAVFLVGIG 202

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY--PAPESALANIYPA---DPRFTK 260
            +++                   +         D +  P+              +P    
Sbjct: 203 GKLSDG-----------------HRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLED 245

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE-MPQ 318
            FEL +  I                   + ++        +   ++      L    MPQ
Sbjct: 246 AFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGEMPQ 289

Query: 319 SSGIAMGFDRLVMLVTGANNINEV 342
           + G  +G  RL ML+    +I +V
Sbjct: 290 TIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|291060011|gb|ADD72746.1| histidyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 467

 Score = 38.5 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 20/165 (12%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSM------SLQYSPGNETHIRAFSTELII 68
           R  L    ++R ++   L     +  F+ ID+        L      +T  + F      
Sbjct: 41  RDLLPDEEIERALLVEKLTVALRQMGFVPIDTPALEYTEVLLRKSEGDTEKQMFR----F 96

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC------FAHAWRNGEQGCLHQPEFTMLEW 122
            D   + + L+        + +A    +++       FA  WR  +       EFT  ++
Sbjct: 97  VDKGGRDVALRFDLTVPLARFVATHYARLYFPFKRYHFAKVWRGEKPQMGRYREFTQCDF 156

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                       + +  IR    +A  +       +   F     
Sbjct: 157 DIVGSDSVCADFEILKSIRHMLYMAGAEHIRIHVAHRGLFDRFLR 201


>gi|254038963|ref|ZP_04873015.1| aspartate-ammonia ligase [Escherichia sp. 1_1_43]
 gi|226838928|gb|EEH70955.1| aspartate-ammonia ligase [Escherichia sp. 1_1_43]
 gi|309704192|emb|CBJ03539.1| aspartate--ammonia ligase (asparagine synthetase A) [Escherichia
           coli ETEC H10407]
 gi|323934905|gb|EGB31283.1| aspartate-ammonia ligase [Escherichia coli E1520]
          Length = 330

 Score = 38.5 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 82/324 (25%), Gaps = 50/324 (15%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +     
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWA 142

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                  +           P+ I    +    +               + L  +     G
Sbjct: 143 GIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLDAKWRERAIAKDLGAVFLVGIG 202

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY--PAPESALANIYPA---DPRFTK 260
            +++                   +         D +  P+              +P    
Sbjct: 203 GKLSDG-----------------HRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLED 245

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE-MPQ 318
            FEL +  I                   + ++        +   ++      L    MPQ
Sbjct: 246 AFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGEMPQ 289

Query: 319 SSGIAMGFDRLVMLVTGANNINEV 342
           + G  +G  RL ML+    +I +V
Sbjct: 290 TIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|291513912|emb|CBK63122.1| DNA gyrase subunit B [Alistipes shahii WAL 8301]
          Length = 652

 Score = 38.5 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 40/120 (33%)

Query: 194 RHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYP 253
             ++YL  ++ G+ V     ++D FS  +   +     I   T L  +    +     Y 
Sbjct: 254 EQIIYLDTEKNGVPVEVAMQYNDSFSENVHSYVNNINTIEGGTHLTGFRRALTRTLKKYA 313

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL 313
            D     + +      +       ++    Q  +FE + + K         +D+   + L
Sbjct: 314 EDSGMLAKLKFDINGDDFREGLTAVVSVKVQEPQFEGQTKTKLGNDEVAAAVDQALASAL 373


>gi|332998032|gb|EGK17637.1| aspartate--ammonia ligase [Shigella flexneri K-272]
 gi|333013718|gb|EGK33083.1| aspartate--ammonia ligase [Shigella flexneri K-227]
          Length = 330

 Score = 38.5 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 82/324 (25%), Gaps = 50/324 (15%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +     
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWA 142

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                  +           P+ I    +    +               + L  +     G
Sbjct: 143 GIKATEAAVNEEFGLAPFLPDQIHFVHSQELLSRYPDLDAKGRERAIAKDLGAVFLVGIG 202

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY--PAPESALANIYPA---DPRFTK 260
            +++                   +         D +  P+              +P    
Sbjct: 203 GKLSDG-----------------HRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLED 245

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE-MPQ 318
            FEL +  I                   + ++        +   ++      L    MPQ
Sbjct: 246 AFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGEMPQ 289

Query: 319 SSGIAMGFDRLVMLVTGANNINEV 342
           + G  +G  RL ML+    +I +V
Sbjct: 290 TIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|89897705|ref|YP_521192.1| hypothetical protein DSY4959 [Desulfitobacterium hafniense Y51]
 gi|89337153|dbj|BAE86748.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 312

 Score = 38.5 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 17/125 (13%)

Query: 36  FVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL--------QTSPEFS-C 86
             +  F+++ + ++              T         +  +L          +P     
Sbjct: 108 LHQQGFVQVVTPTIITKSALAK-----MTIGEDHPLFSQVFWLDGKKCLRPMLAPNLYTL 162

Query: 87  KKLLAAGEE---KIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
            + L    +   +IF     +R   QG  H  EFTML         E+  +   ++ R  
Sbjct: 163 WRELERLWDKPIRIFEIGTCYRKESQGAQHLNEFTMLNLTELGTPLEERHQRLEDMARWV 222

Query: 144 AEVAN 148
            E A 
Sbjct: 223 LEAAG 227


>gi|82546096|ref|YP_410043.1| asparagine synthetase AsnA [Shigella boydii Sb227]
 gi|123558243|sp|Q31UP3|ASNA_SHIBS RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|81247507|gb|ABB68215.1| asparagine synthetase A [Shigella boydii Sb227]
 gi|320186273|gb|EFW61009.1| Aspartate--ammonia ligase [Shigella flexneri CDC 796-83]
 gi|332089570|gb|EGI94674.1| aspartate--ammonia ligase [Shigella boydii 3594-74]
          Length = 330

 Score = 38.5 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYLDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|228470329|ref|ZP_04055233.1| seryl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228308072|gb|EEK16947.1| seryl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 424

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/141 (9%), Positives = 37/141 (26%), Gaps = 16/141 (11%)

Query: 26  NMIQSSLREYFVEN----QFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTS 81
             +Q +L  +F++      F+E++   +          +    E  +       LYL  +
Sbjct: 175 ARLQRALINFFLDRATAAGFMEVEPPIMVNEASGIGTGQLPDKEGQMYHAQLDNLYLIPT 234

Query: 82  PE-----FSCKKLLAAGE--EKIFCFAHAWRNG----EQGCLHQPEFTMLE-WYRAHESY 129
            E          +L A +       +   +R       +           +         
Sbjct: 235 AEVPVTNIFRDVILEADQLPICCTAYTPCFRREAGSYGKDVRGLNRLHQFDKVEIVSIDR 294

Query: 130 EQLMKDCMNIIRCAAEVANQK 150
                  ++ +    +   ++
Sbjct: 295 PDHSWQQLDKMIAHVKSLVEE 315


>gi|121997230|ref|YP_001002017.1| threonyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|166223346|sp|A1WU53|SYT_HALHL RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|121588635|gb|ABM61215.1| threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase [Halorhodospira
           halophila SL1]
          Length = 640

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 9/96 (9%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQ------YSPGNETHIRA-FSTELIIQDHIRKPLYLQ 79
            +Q  +R    +N + EI +  L        S          F TE   +D+  KP+   
Sbjct: 275 EVQDYIRRLMRDNGYQEIHTPMLVDRSLWERSGHWAMFAENMFVTESESRDYAVKPMNCP 334

Query: 80  TSPEFSCKKLLAAG--EEKIFCFAHAWRNGEQGCLH 113
              E   + L +      ++  F    RN   G LH
Sbjct: 335 CHVEVFKQGLKSYRDLPLRLAEFGSCHRNEPSGTLH 370


>gi|269866788|ref|XP_002652392.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220062602|gb|EED41664.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 157

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 64  EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 115

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 116 GGIGKSRVVMFLLEARHIGEI 136


>gi|13507844|ref|NP_109793.1| phenylalanyl-tRNA synthetase subunit alpha [Mycoplasma pneumoniae
           M129]
 gi|2500984|sp|P75564|SYFA_MYCPN RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|1673699|gb|AAB95697.1| phenylalanyl-tRNA synthetase alpha-subunit [Mycoplasma pneumoniae
           M129]
 gi|301633216|gb|ADK86770.1| phenylalanine--tRNA ligase, alpha subunit [Mycoplasma pneumoniae
           FH]
          Length = 341

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 323 AMGFDRLVMLVTGANNINE 341
            +G +RLVML  G ++I +
Sbjct: 309 GIGIERLVMLKHGISDIRD 327


>gi|219109220|pdb|2ZNI|A Chain A, Crystal Structure Of Pyrrolysyl-Trna Synthetase-Trna(Pyl)
           Complex From Desulfitobacterium Hafniense
 gi|219109221|pdb|2ZNI|B Chain B, Crystal Structure Of Pyrrolysyl-Trna Synthetase-Trna(Pyl)
           Complex From Desulfitobacterium Hafniense
 gi|219109224|pdb|2ZNJ|A Chain A, Crystal Structure Of Pyrrolysyl-Trna Synthetase From
           Desulfitobacterium Hafniense
 gi|219109225|pdb|2ZNJ|B Chain B, Crystal Structure Of Pyrrolysyl-Trna Synthetase From
           Desulfitobacterium Hafniense
 gi|219109226|pdb|2ZNJ|C Chain C, Crystal Structure Of Pyrrolysyl-Trna Synthetase From
           Desulfitobacterium Hafniense
          Length = 308

 Score = 38.1 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 17/125 (13%)

Query: 36  FVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL--------QTSPEFS-C 86
             +  F+++ + ++              T         +  +L          +P     
Sbjct: 104 LHQQGFVQVVTPTIITKSALAK-----MTIGEDHPLFSQVFWLDGKKCLRPMLAPNLYTL 158

Query: 87  KKLLAAGEE---KIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
            + L    +   +IF     +R   QG  H  EFTML         E+  +   ++ R  
Sbjct: 159 WRELERLWDKPIRIFEIGTCYRKESQGAQHLNEFTMLNLTELGTPLEERHQRLEDMARWV 218

Query: 144 AEVAN 148
            E A 
Sbjct: 219 LEAAG 223


>gi|196049919|pdb|3DSQ|A Chain A, Structure Of Desulfitobacterium Hafniense Pylsc, A
           Pyrrolysyl Trna Synthetase
 gi|196049920|pdb|3DSQ|B Chain B, Structure Of Desulfitobacterium Hafniense Pylsc, A
           Pyrrolysyl Trna Synthetase
 gi|53771773|gb|AAU93507.1| pyrrolysyl-tRNA synthetase [Desulfitobacterium hafniense]
          Length = 288

 Score = 38.1 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 17/125 (13%)

Query: 36  FVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYL--------QTSPEFS-C 86
             +  F+++ + ++              T         +  +L          +P     
Sbjct: 84  LHQQGFVQVVTPTIITKSALAK-----MTIGEDHPLFSQVFWLDGKKCLRPMLAPNLYTL 138

Query: 87  KKLLAAGEE---KIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
            + L    +   +IF     +R   QG  H  EFTML         E+  +   ++ R  
Sbjct: 139 WRELERLWDKPIRIFEIGTCYRKESQGAQHLNEFTMLNLTELGTPLEERHQRLEDMARWV 198

Query: 144 AEVAN 148
            E A 
Sbjct: 199 LEAAG 203


>gi|29833392|ref|NP_828026.1| alanyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|41018194|sp|Q827S4|SYA_STRAW RecName: Full=Alanyl-tRNA synthetase; AltName: Full=Alanine--tRNA
           ligase; Short=AlaRS
 gi|29610515|dbj|BAC74561.1| putative alanyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
          Length = 890

 Score = 38.1 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 42/196 (21%), Gaps = 32/196 (16%)

Query: 143 AAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQ 202
             ++     F             E +T  +    Y  +D           D     +   
Sbjct: 83  FFQMCGNFSFGDYFKEGAITYAWELLTTPQDKGGY-GLDPERLWITVYLDDDEAETIWRD 141

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRF 262
           + G+            +   +    P     C  I                 D R+ + +
Sbjct: 142 KIGVPAERIQRLGKKDNYWSMGV--PGPCGPCSEINYDRGPEFGVEGGPAVNDERYVEIW 199

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGI 322
            L     E      +  D  E                     ID                
Sbjct: 200 NLVFMQYERGEGTSK--DDFEIL------------GDLPQKNIDT--------------- 230

Query: 323 AMGFDRLVMLVTGANN 338
            +G +RL M++ G  N
Sbjct: 231 GLGMERLAMILQGVQN 246


>gi|240143768|ref|ZP_04742369.1| serine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257204237|gb|EEV02522.1| serine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291537259|emb|CBL10371.1| seryl-tRNA synthetase [Roseburia intestinalis M50/1]
 gi|291539204|emb|CBL12315.1| seryl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 429

 Score = 38.1 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 7/67 (10%), Positives = 20/67 (29%), Gaps = 8/67 (11%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
                 + + S  R++ ++  F  +    +  S           T ++  D +   +Y  
Sbjct: 173 DIARLHSAVISYARDFMIDRGFTYVIPPFMIRS--------NVVTGVMSFDEMDAMMYKI 224

Query: 80  TSPEFSC 86
              +   
Sbjct: 225 EGEDLYL 231


>gi|332158914|ref|YP_004424193.1| phenylalanyl-tRNA synthetase subunit alpha [Pyrococcus sp. NA2]
 gi|331034377|gb|AEC52189.1| phenylalanyl-tRNA synthetase subunit alpha [Pyrococcus sp. NA2]
          Length = 499

 Score = 38.1 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DRL M   G ++I 
Sbjct: 464 WGIGIDRLAMFKLGIDDIR 482


>gi|71894308|ref|YP_278416.1| hypothetical protein MS53_0291 [Mycoplasma synoviae 53]
          Length = 125

 Score = 38.1 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 2/81 (2%)

Query: 72  IRKPLYLQTSPEFSCKKLLAA-GEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
           +    YL  S +F  + +L A     +    + +R  +    H  +F   E      +  
Sbjct: 32  LNYEFYLTDSMQFHLELMLRAKDISSVGYITNTFRGEQVDNRHLHQFNHFEIEMLG-NLN 90

Query: 131 QLMKDCMNIIRCAAEVANQKI 151
              +  ++ I+       +K 
Sbjct: 91  NCKEKIIDYIKFIVNELIKKH 111


>gi|212223542|ref|YP_002306778.1| phenylalanyl-tRNA synthetase subunit alpha [Thermococcus onnurineus
           NA1]
 gi|229890209|sp|B6YTJ4|SYFA_THEON RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|212008499|gb|ACJ15881.1| phenylalanyl-tRNA synthetase, alpha subunit [Thermococcus
           onnurineus NA1]
          Length = 500

 Score = 38.1 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DRL M   G ++I 
Sbjct: 465 WGIGIDRLAMFKLGIDDIR 483


>gi|14521583|ref|NP_127059.1| phenylalanyl-tRNA synthetase subunit alpha [Pyrococcus abyssi GE5]
 gi|12230001|sp|Q9UYX3|SYFA_PYRAB RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|5458802|emb|CAB50289.1| pheS phenylalanyl-tRNA synthetase, subunit alpha [Pyrococcus abyssi
           GE5]
          Length = 500

 Score = 38.1 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DRL M   G ++I 
Sbjct: 465 WGIGIDRLAMFKLGIDDIR 483


>gi|320661150|gb|EFX28586.1| asparagine synthetase AsnA [Escherichia coli O55:H7 str. USDA 5905]
 gi|323975188|gb|EGB70292.1| aspartate-ammonia ligase [Escherichia coli TW10509]
          Length = 330

 Score = 38.1 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  ARY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLARYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|24115047|ref|NP_709557.1| asparagine synthetase AsnA [Shigella flexneri 2a str. 301]
 gi|30064951|ref|NP_839122.1| asparagine synthetase AsnA [Shigella flexneri 2a str. 2457T]
 gi|110807568|ref|YP_691088.1| asparagine synthetase AsnA [Shigella flexneri 5 str. 8401]
 gi|47115768|sp|Q83PJ4|ASNA_SHIFL RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|122957078|sp|Q0SYT2|ASNA_SHIF8 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|24054307|gb|AAN45264.1| asparagine synthetase A [Shigella flexneri 2a str. 301]
 gi|30043212|gb|AAP18933.1| asparagine synthetase A [Shigella flexneri 2a str. 2457T]
 gi|110617116|gb|ABF05783.1| asparagine synthetase A [Shigella flexneri 5 str. 8401]
 gi|281603142|gb|ADA76126.1| Aspartate--ammonia ligase [Shigella flexneri 2002017]
 gi|313647640|gb|EFS12088.1| aspartate--ammonia ligase [Shigella flexneri 2a str. 2457T]
 gi|332750753|gb|EGJ81161.1| aspartate--ammonia ligase [Shigella flexneri 4343-70]
 gi|332750893|gb|EGJ81299.1| aspartate--ammonia ligase [Shigella flexneri K-671]
 gi|332751696|gb|EGJ82094.1| aspartate--ammonia ligase [Shigella flexneri 2747-71]
 gi|332763999|gb|EGJ94236.1| aspartate--ammonia ligase [Shigella flexneri 2930-71]
 gi|332997066|gb|EGK16682.1| aspartate--ammonia ligase [Shigella flexneri K-218]
 gi|333013467|gb|EGK32838.1| aspartate--ammonia ligase [Shigella flexneri K-304]
          Length = 330

 Score = 38.1 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 83/324 (25%), Gaps = 50/324 (15%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+ +    + +     
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQLSTLKSTVEAIWA 142

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                  +           P+ I    +    +               + L  +     G
Sbjct: 143 GIKATEAAVNEEFGLAPFLPDQIHFVHSQELLSRYPDLDAKGRERAIAKDLGAVFLVGIG 202

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY--PAPESALANIYPA---DPRFTK 260
            +++                   +         D +  P+              +P    
Sbjct: 203 GKLSDG-----------------HRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLED 245

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE-MPQ 318
            FEL +  I                   + ++        +   ++      L    MPQ
Sbjct: 246 AFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGEMPQ 289

Query: 319 SSGIAMGFDRLVMLVTGANNINEV 342
           + G  +G  RL ML+    +I +V
Sbjct: 290 TIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|315230254|ref|YP_004070690.1| threonyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183282|gb|ADT83467.1| threonyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 625

 Score = 38.1 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 77/302 (25%), Gaps = 53/302 (17%)

Query: 40  QFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEF------------S 85
             +E+++  +     P  E ++  F     I     K  +L+ +  F             
Sbjct: 253 GAMEVETPIMYDFEHPALEKYLNRFPARQYIVKSGDKKYFLRFAACFGQFLIKKDATISY 312

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
               L   E   + F    R    G      FTM + +   +  +Q M++     + + E
Sbjct: 313 KHLPLRMYELTRYSFRREKRGELSGLRRLRAFTMPDMHTVAKDLKQAMEEFKKQYKLSME 372

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
           V      +  +               E   R+         D        L+ +  +   
Sbjct: 373 VLKGVGLTPDDY--------------EVAIRFTEDFWNENKDFV----VELVKIIGKPVL 414

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
           I +     +  I           +      T+        +    I   D    ++  L 
Sbjct: 415 IEMWKQRFFYFILKFEFNFVDNLDKAAALSTVQID--VENAERFGITYYDEDGKEKHPLI 472

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI------------DEDFLA-C 312
                                  EK+ + + +     YP+            +ED+L   
Sbjct: 473 LHCSPSG------AIERVMYAILEKQAKLRNQGKKPMYPLWLSPIQVRVIPVNEDYLDYA 526

Query: 313 LT 314
           L 
Sbjct: 527 LY 528


>gi|327400996|ref|YP_004341835.1| formylmethanofuran dehydrogenase subunit B [Archaeoglobus veneficus
           SNP6]
 gi|327316504|gb|AEA47120.1| formylmethanofuran dehydrogenase subunit B [Archaeoglobus veneficus
           SNP6]
          Length = 388

 Score = 38.1 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 39/138 (28%), Gaps = 7/138 (5%)

Query: 182 LGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY 241
            G      +  ++ +   + + A I         D+   +L  ++               
Sbjct: 68  YGLDTIPCEAQEKAIELAKEKGAAIDDCSSFCLGDLVELVLKGELPTATLDEVRDNAY-- 125

Query: 242 PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNE 301
                  AN + + PR   RF  Y  + +     +E    +    R  +  +  +K    
Sbjct: 126 -VIVYWGANPHQSLPRHMSRFTYYPRSGKRQRGYEEDRYLVVVDVRLSETAKLARKGGKF 184

Query: 302 TYPIDED----FLACLTE 315
               D D    FL  L  
Sbjct: 185 IMGSDADVIDSFLKALDG 202


>gi|242398606|ref|YP_002994030.1| Phenylalanyl-tRNA synthetase alpha chain [Thermococcus sibiricus MM
           739]
 gi|259511893|sp|C6A236|SYFA_THESM RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|242264999|gb|ACS89681.1| Phenylalanyl-tRNA synthetase alpha chain [Thermococcus sibiricus MM
           739]
          Length = 503

 Score = 38.1 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DRL M   G ++I 
Sbjct: 468 WGIGIDRLAMFKLGIDDIR 486


>gi|312144587|ref|YP_003996033.1| histidyl-tRNA synthetase 2 [Halanaerobium sp. 'sapolanicus']
 gi|311905238|gb|ADQ15679.1| histidyl-tRNA synthetase 2 [Halanaerobium sp. 'sapolanicus']
          Length = 420

 Score = 38.1 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 22 LLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
          L +R  I  ++R  F  N + E+ + +L+  
Sbjct: 16 LRRRKTIYEAIRNVFEANAYREVITPTLESI 46


>gi|269862544|ref|XP_002650880.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220065476|gb|EED43177.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 310

 Score = 38.1 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 11/91 (12%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 196 EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 247

Query: 322 IAMGFDRLVMLVTGANNINEVIWTPFSQSNQ 352
             +G  R+VM +  A +I E+         +
Sbjct: 248 GGIGKSRVVMFLLEARHIGEIQA--RVWPEK 276


>gi|57640856|ref|YP_183334.1| phenylalanyl-tRNA synthetase subunit alpha [Thermococcus
           kodakarensis KOD1]
 gi|73919477|sp|Q76KA8|SYFA_PYRKO RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain;
           Short=PheRS; AltName: Full=Tk-pheRSA
 gi|37665538|dbj|BAC99020.1| phenylalanyl-tRNA synthetase alpha-subunit [Thermococcus
           kodakaraensis KOD1]
 gi|57159180|dbj|BAD85110.1| phenylalanyl-tRNA synthetase, alpha subunit [Thermococcus
           kodakarensis KOD1]
          Length = 501

 Score = 38.1 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DRL M   G ++I 
Sbjct: 466 WGIGIDRLAMFKLGIDDIR 484


>gi|256848328|ref|ZP_05553771.1| aspartate-ammonia ligase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714926|gb|EEU29904.1| aspartate-ammonia ligase [Lactobacillus coleohominis 101-4-CHN]
          Length = 337

 Score = 38.1 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 74/265 (27%), Gaps = 44/265 (16%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHE----SYEQLMKDCMN 138
            + K+      E ++   +A R + E    H       +W +       + E L      
Sbjct: 90  LALKRYGFGMHEGLYTNMNAIRKDEELDNFHSIYVDQWDWEKVIAKEERTEETLKATVRK 149

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           I +    + ++  + F     +   E  ++T  E   R+           PD        
Sbjct: 150 IFKVIKHMEHEVWYKFPQAVYHLPDEIHFVTTQELEDRW-----------PDLTPMEREE 198

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             A++ G          D   R       P+ G                           
Sbjct: 199 RIAKELG--CVFVMKIGDKLKRSGK----PHDGRAPDYDDWALNGDIIFWYEPLQRKLEI 252

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MP 317
           +      +  I +                 + ++++   +  E  P  +  L      +P
Sbjct: 253 S------SMGIRVSP------------ESMKYQLEQAGAVDREQLPFHKMLLN---GELP 291

Query: 318 QSSGIAMGFDRLVMLVTGANNINEV 342
            + G  +G  RL ML+ G  ++ EV
Sbjct: 292 YTIGGGIGQSRLCMLLLGKAHVGEV 316


>gi|150863683|ref|XP_001382237.2| phenylalanyl-tRNA synthetase alpha subunit, mitochondrial
           [Scheffersomyces stipitis CBS 6054]
 gi|149384939|gb|ABN64208.2| phenylalanyl-tRNA synthetase alpha subunit, mitochondrial
           [Scheffersomyces stipitis CBS 6054]
          Length = 423

 Score = 38.1 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DR+ ML+ G  +I 
Sbjct: 287 FGIGIDRIAMLLFGIPDIR 305


>gi|16131612|ref|NP_418200.1| asparagine synthetase A [Escherichia coli str. K-12 substr. MG1655]
 gi|89110263|ref|AP_004043.1| asparagine synthetase A [Escherichia coli str. K-12 substr. W3110]
 gi|110644085|ref|YP_671815.1| asparagine synthetase AsnA [Escherichia coli 536]
 gi|157163226|ref|YP_001460544.1| asparagine synthetase AsnA [Escherichia coli HS]
 gi|170022219|ref|YP_001727173.1| asparagine synthetase AsnA [Escherichia coli ATCC 8739]
 gi|170083245|ref|YP_001732565.1| asparagine synthetase A [Escherichia coli str. K-12 substr. DH10B]
 gi|188496073|ref|ZP_03003343.1| aspartate--ammonia ligase [Escherichia coli 53638]
 gi|191170592|ref|ZP_03032145.1| aspartate--ammonia ligase [Escherichia coli F11]
 gi|218692032|ref|YP_002400244.1| asparagine synthetase AsnA [Escherichia coli ED1a]
 gi|238902835|ref|YP_002928631.1| asparagine synthetase A [Escherichia coli BW2952]
 gi|256025525|ref|ZP_05439390.1| asparagine synthetase AsnA [Escherichia sp. 4_1_40B]
 gi|293413194|ref|ZP_06655860.1| aspartate-ammonia ligase [Escherichia coli B354]
 gi|300916387|ref|ZP_07133127.1| aspartate--ammonia ligase [Escherichia coli MS 115-1]
 gi|300950661|ref|ZP_07164555.1| aspartate--ammonia ligase [Escherichia coli MS 116-1]
 gi|300983875|ref|ZP_07176783.1| aspartate--ammonia ligase [Escherichia coli MS 200-1]
 gi|301019841|ref|ZP_07183981.1| aspartate--ammonia ligase [Escherichia coli MS 196-1]
 gi|301644420|ref|ZP_07244419.1| aspartate--ammonia ligase [Escherichia coli MS 146-1]
 gi|306815904|ref|ZP_07450042.1| asparagine synthetase AsnA [Escherichia coli NC101]
 gi|307140444|ref|ZP_07499800.1| asparagine synthetase AsnA [Escherichia coli H736]
 gi|312971964|ref|ZP_07786138.1| aspartate--ammonia ligase [Escherichia coli 1827-70]
 gi|331644471|ref|ZP_08345600.1| aspartate--ammonia ligase [Escherichia coli H736]
 gi|331655406|ref|ZP_08356405.1| aspartate--ammonia ligase [Escherichia coli M718]
 gi|331660088|ref|ZP_08361026.1| aspartate--ammonia ligase [Escherichia coli TA206]
 gi|331665398|ref|ZP_08366299.1| aspartate--ammonia ligase [Escherichia coli TA143]
 gi|331675227|ref|ZP_08375980.1| aspartate--ammonia ligase [Escherichia coli TA280]
 gi|331685471|ref|ZP_08386057.1| aspartate--ammonia ligase [Escherichia coli H299]
 gi|114262|sp|P00963|ASNA_ECOLI RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|123343407|sp|Q0TAW5|ASNA_ECOL5 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|166988299|sp|A8A6K7|ASNA_ECOHS RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|189046374|sp|B1IWZ4|ASNA_ECOLC RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|226729503|sp|B1X9X2|ASNA_ECODH RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|254806829|sp|B7N247|ASNA_ECO81 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|259585322|sp|C4ZZ22|ASNA_ECOBW RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|147026|gb|AAA24248.1| asparagine synthetase A [Escherichia coli]
 gi|147033|gb|AAA24253.1| asparagine synthetase A [Escherichia coli]
 gi|290593|gb|AAA62096.1| asparagine synthetase A [Escherichia coli]
 gi|1790183|gb|AAC76767.1| asparagine synthetase A [Escherichia coli str. K-12 substr. MG1655]
 gi|85676294|dbj|BAE77544.1| asparagine synthetase A [Escherichia coli str. K12 substr. W3110]
 gi|110345677|gb|ABG71914.1| aspartate-ammonia ligase [Escherichia coli 536]
 gi|157068906|gb|ABV08161.1| aspartate--ammonia ligase [Escherichia coli HS]
 gi|169757147|gb|ACA79846.1| Aspartate--ammonia ligase [Escherichia coli ATCC 8739]
 gi|169891080|gb|ACB04787.1| asparagine synthetase A [Escherichia coli str. K-12 substr. DH10B]
 gi|188491272|gb|EDU66375.1| aspartate--ammonia ligase [Escherichia coli 53638]
 gi|190909400|gb|EDV68986.1| aspartate--ammonia ligase [Escherichia coli F11]
 gi|218429596|emb|CAR10418.1| asparagine synthetase A [Escherichia coli ED1a]
 gi|238860018|gb|ACR62016.1| asparagine synthetase A [Escherichia coli BW2952]
 gi|260451399|gb|ACX41821.1| aspartate/ammonia ligase [Escherichia coli DH1]
 gi|281180802|dbj|BAI57132.1| asparagine synthetase A [Escherichia coli SE15]
 gi|284923858|emb|CBG36957.1| aspartate--ammonia ligase (asparagine synthetase A) [Escherichia
           coli 042]
 gi|291468327|gb|EFF10822.1| aspartate-ammonia ligase [Escherichia coli B354]
 gi|299882055|gb|EFI90266.1| aspartate--ammonia ligase [Escherichia coli MS 196-1]
 gi|300306830|gb|EFJ61350.1| aspartate--ammonia ligase [Escherichia coli MS 200-1]
 gi|300416291|gb|EFJ99601.1| aspartate--ammonia ligase [Escherichia coli MS 115-1]
 gi|300450031|gb|EFK13651.1| aspartate--ammonia ligase [Escherichia coli MS 116-1]
 gi|301077259|gb|EFK92065.1| aspartate--ammonia ligase [Escherichia coli MS 146-1]
 gi|305850300|gb|EFM50757.1| asparagine synthetase AsnA [Escherichia coli NC101]
 gi|310334341|gb|EFQ00546.1| aspartate--ammonia ligase [Escherichia coli 1827-70]
 gi|315138329|dbj|BAJ45488.1| asparagine synthetase AsnA [Escherichia coli DH1]
 gi|315618548|gb|EFU99134.1| aspartate--ammonia ligase [Escherichia coli 3431]
 gi|320193711|gb|EFW68344.1| Aspartate--ammonia ligase [Escherichia coli WV_060327]
 gi|323189523|gb|EFZ74803.1| aspartate--ammonia ligase [Escherichia coli RN587/1]
 gi|323939193|gb|EGB35406.1| aspartate-ammonia ligase [Escherichia coli E482]
 gi|331036765|gb|EGI08991.1| aspartate--ammonia ligase [Escherichia coli H736]
 gi|331047421|gb|EGI19499.1| aspartate--ammonia ligase [Escherichia coli M718]
 gi|331053303|gb|EGI25336.1| aspartate--ammonia ligase [Escherichia coli TA206]
 gi|331057908|gb|EGI29894.1| aspartate--ammonia ligase [Escherichia coli TA143]
 gi|331067672|gb|EGI39074.1| aspartate--ammonia ligase [Escherichia coli TA280]
 gi|331077842|gb|EGI49054.1| aspartate--ammonia ligase [Escherichia coli H299]
          Length = 330

 Score = 38.1 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLELEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|215489082|ref|YP_002331513.1| asparagine synthetase AsnA [Escherichia coli O127:H6 str. E2348/69]
 gi|312967846|ref|ZP_07782058.1| aspartate--ammonia ligase [Escherichia coli 2362-75]
 gi|254806827|sp|B7UMK9|ASNA_ECO27 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|215267154|emb|CAS11602.1| asparagine synthetase A [Escherichia coli O127:H6 str. E2348/69]
 gi|312287407|gb|EFR15315.1| aspartate--ammonia ligase [Escherichia coli 2362-75]
          Length = 330

 Score = 38.1 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 82/324 (25%), Gaps = 50/324 (15%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +     
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWG 142

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                  +           P+ I    +    +               + L  +     G
Sbjct: 143 GIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLDAKGRERAIAKDLGAVFLVGIG 202

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY--PAPESALANIYPA---DPRFTK 260
            +++                   +         D +  P+              +P    
Sbjct: 203 GKLSDG-----------------HRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLED 245

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE-MPQ 318
            FEL +  I                   + ++        +   ++      L    MPQ
Sbjct: 246 AFELSSMGIR------------VDADTLKHQLAL--TGDEDRLELEWH--QALLRGEMPQ 289

Query: 319 SSGIAMGFDRLVMLVTGANNINEV 342
           + G  +G  RL ML+    +I +V
Sbjct: 290 TIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|293464070|ref|ZP_06664484.1| aspartate-ammonia ligase [Escherichia coli B088]
 gi|300815001|ref|ZP_07095226.1| aspartate--ammonia ligase [Escherichia coli MS 107-1]
 gi|300824546|ref|ZP_07104656.1| aspartate--ammonia ligase [Escherichia coli MS 119-7]
 gi|331670595|ref|ZP_08371434.1| aspartate--ammonia ligase [Escherichia coli TA271]
 gi|331679848|ref|ZP_08380518.1| aspartate--ammonia ligase [Escherichia coli H591]
 gi|291321702|gb|EFE61138.1| aspartate-ammonia ligase [Escherichia coli B088]
 gi|300522947|gb|EFK44016.1| aspartate--ammonia ligase [Escherichia coli MS 119-7]
 gi|300531893|gb|EFK52955.1| aspartate--ammonia ligase [Escherichia coli MS 107-1]
 gi|331062657|gb|EGI34577.1| aspartate--ammonia ligase [Escherichia coli TA271]
 gi|331073020|gb|EGI44345.1| aspartate--ammonia ligase [Escherichia coli H591]
          Length = 330

 Score = 38.1 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLELEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|15639628|ref|NP_219078.1| histidyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025866|ref|YP_001933638.1| histidyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094402|sp|O83647|SYH_TREPA RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|229470701|sp|B2S3N0|SYH_TREPS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|3322940|gb|AAC65615.1| histidyl-tRNA synthetase (hisS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018441|gb|ACD71059.1| histidyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 442

 Score = 38.1 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 20/165 (12%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSM------SLQYSPGNETHIRAFSTELII 68
           R  L    ++R ++   L     +  F+ ID+        L      +T  + F      
Sbjct: 16  RDLLPDEEIERALLVEKLTVALRQMGFVPIDTPALEYTEVLLRKSEGDTEKQMFR----F 71

Query: 69  QDHIRKPLYLQTSPEFSCKKLLAAGEEKIFC------FAHAWRNGEQGCLHQPEFTMLEW 122
            D   + + L+        + +A    +++       FA  WR  +       EFT  ++
Sbjct: 72  VDKGGRDVALRFDLTVPLARFVATHYARLYFPFKRYHFAKVWRGEKPQMGRYREFTQCDF 131

Query: 123 YRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
                       + +  IR    +A  +       +   F     
Sbjct: 132 DIVGSDSVCADFEILKSIRHMLYMAGAEHIRIHVAHRGLFDRFLR 176


>gi|47459152|ref|YP_016014.1| phenylalanyl-tRNA synthetase subunit alpha [Mycoplasma mobile 163K]
 gi|47458481|gb|AAT27803.1| phenylalanyl-tRNA synthetase alpha subunit [Mycoplasma mobile 163K]
          Length = 329

 Score = 38.1 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 16/51 (31%), Gaps = 14/51 (27%)

Query: 291 EMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINE 341
           E   K   Y             L          +G +R+ M+  G +NI E
Sbjct: 272 ENVMKAAGYTNDM-------NALA-------WGIGIERIAMIKYGIDNIRE 308


>gi|15804344|ref|NP_290383.1| asparagine synthetase AsnA [Escherichia coli O157:H7 EDL933]
 gi|15833940|ref|NP_312713.1| asparagine synthetase AsnA [Escherichia coli O157:H7 str. Sakai]
 gi|26250490|ref|NP_756530.1| asparagine synthetase AsnA [Escherichia coli CFT073]
 gi|82779064|ref|YP_405413.1| asparagine synthetase AsnA [Shigella dysenteriae Sd197]
 gi|168752412|ref|ZP_02777434.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4113]
 gi|168753646|ref|ZP_02778653.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4401]
 gi|168765050|ref|ZP_02790057.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4501]
 gi|168777890|ref|ZP_02802897.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4196]
 gi|168780648|ref|ZP_02805655.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4076]
 gi|168786587|ref|ZP_02811594.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC869]
 gi|168800969|ref|ZP_02825976.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC508]
 gi|195936371|ref|ZP_03081753.1| asparagine synthetase AsnA [Escherichia coli O157:H7 str. EC4024]
 gi|208807544|ref|ZP_03249881.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4206]
 gi|208814120|ref|ZP_03255449.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4045]
 gi|208819200|ref|ZP_03259520.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4042]
 gi|209399484|ref|YP_002273272.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4115]
 gi|217326391|ref|ZP_03442475.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. TW14588]
 gi|227883966|ref|ZP_04001771.1| asparagine synthetase AsnA [Escherichia coli 83972]
 gi|254795750|ref|YP_003080587.1| asparagine synthetase AsnA [Escherichia coli O157:H7 str. TW14359]
 gi|261225901|ref|ZP_05940182.1| asparagine synthetase A [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258946|ref|ZP_05951479.1| asparagine synthetase A [Escherichia coli O157:H7 str. FRIK966]
 gi|291285168|ref|YP_003501986.1| Aspartate--ammonia ligase [Escherichia coli O55:H7 str. CB9615]
 gi|293417217|ref|ZP_06659844.1| aspartate-ammonia ligase [Escherichia coli B185]
 gi|301020852|ref|ZP_07184913.1| aspartate--ammonia ligase [Escherichia coli MS 69-1]
 gi|301047567|ref|ZP_07194639.1| aspartate--ammonia ligase [Escherichia coli MS 185-1]
 gi|309784455|ref|ZP_07679094.1| aspartate--ammonia ligase [Shigella dysenteriae 1617]
 gi|54036768|sp|P63624|ASNA_ECO57 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|54040837|sp|P63623|ASNA_ECOL6 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|123561169|sp|Q329T3|ASNA_SHIDS RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|226729500|sp|B5YY02|ASNA_ECO5E RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|12518604|gb|AAG58947.1|AE005606_3 asparagine synthetase A [Escherichia coli O157:H7 str. EDL933]
 gi|26110920|gb|AAN83104.1|AE016769_219 Aspartate--ammonia ligase [Escherichia coli CFT073]
 gi|13364161|dbj|BAB38109.1| asparagine synthetase A [Escherichia coli O157:H7 str. Sakai]
 gi|81243212|gb|ABB63922.1| asparagine synthetase A [Shigella dysenteriae Sd197]
 gi|187766971|gb|EDU30815.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4196]
 gi|188013732|gb|EDU51854.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4113]
 gi|189001572|gb|EDU70558.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4076]
 gi|189359367|gb|EDU77786.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4401]
 gi|189365069|gb|EDU83485.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4501]
 gi|189373229|gb|EDU91645.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC869]
 gi|189376795|gb|EDU95211.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC508]
 gi|208727345|gb|EDZ76946.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4206]
 gi|208735397|gb|EDZ84084.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4045]
 gi|208739323|gb|EDZ87005.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4042]
 gi|209160884|gb|ACI38317.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC4115]
 gi|209753768|gb|ACI75191.1| hypothetical protein ECs4686 [Escherichia coli]
 gi|209753770|gb|ACI75192.1| hypothetical protein ECs4686 [Escherichia coli]
 gi|209753772|gb|ACI75193.1| hypothetical protein ECs4686 [Escherichia coli]
 gi|209753774|gb|ACI75194.1| hypothetical protein ECs4686 [Escherichia coli]
 gi|209753776|gb|ACI75195.1| hypothetical protein ECs4686 [Escherichia coli]
 gi|217322612|gb|EEC31036.1| aspartate--ammonia ligase [Escherichia coli O157:H7 str. TW14588]
 gi|222035457|emb|CAP78202.1| Aspartate--ammonia ligase [Escherichia coli LF82]
 gi|227839244|gb|EEJ49710.1| asparagine synthetase AsnA [Escherichia coli 83972]
 gi|254595150|gb|ACT74511.1| asparagine synthetase A [Escherichia coli O157:H7 str. TW14359]
 gi|290765041|gb|ADD59002.1| Aspartate--ammonia ligase [Escherichia coli O55:H7 str. CB9615]
 gi|291431248|gb|EFF04241.1| aspartate-ammonia ligase [Escherichia coli B185]
 gi|300300553|gb|EFJ56938.1| aspartate--ammonia ligase [Escherichia coli MS 185-1]
 gi|300398422|gb|EFJ81960.1| aspartate--ammonia ligase [Escherichia coli MS 69-1]
 gi|307555883|gb|ADN48658.1| asparagine synthetase A [Escherichia coli ABU 83972]
 gi|308927962|gb|EFP73430.1| aspartate--ammonia ligase [Shigella dysenteriae 1617]
 gi|312948310|gb|ADR29137.1| asparagine synthetase AsnA [Escherichia coli O83:H1 str. NRG 857C]
 gi|320174635|gb|EFW49771.1| Aspartate--ammonia ligase [Shigella dysenteriae CDC 74-1112]
 gi|320180074|gb|EFW55016.1| Aspartate--ammonia ligase [Shigella boydii ATCC 9905]
 gi|320191152|gb|EFW65802.1| Aspartate--ammonia ligase [Escherichia coli O157:H7 str. EC1212]
 gi|320639472|gb|EFX09087.1| asparagine synthetase AsnA [Escherichia coli O157:H7 str. G5101]
 gi|320644912|gb|EFX13948.1| asparagine synthetase AsnA [Escherichia coli O157:H- str. 493-89]
 gi|320650178|gb|EFX18674.1| asparagine synthetase AsnA [Escherichia coli O157:H- str. H 2687]
 gi|320655527|gb|EFX23462.1| asparagine synthetase AsnA [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320666279|gb|EFX33285.1| asparagine synthetase AsnA [Escherichia coli O157:H7 str. LSU-61]
 gi|324007994|gb|EGB77213.1| aspartate--ammonia ligase [Escherichia coli MS 57-2]
 gi|326340508|gb|EGD64307.1| Aspartate--ammonia ligase [Escherichia coli O157:H7 str. 1044]
 gi|326341574|gb|EGD65363.1| Aspartate--ammonia ligase [Escherichia coli O157:H7 str. 1125]
 gi|332084590|gb|EGI89784.1| aspartate--ammonia ligase [Shigella boydii 5216-82]
          Length = 330

 Score = 38.1 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|194431155|ref|ZP_03063448.1| aspartate--ammonia ligase [Shigella dysenteriae 1012]
 gi|194420610|gb|EDX36686.1| aspartate--ammonia ligase [Shigella dysenteriae 1012]
 gi|332084745|gb|EGI89931.1| aspartate--ammonia ligase [Shigella dysenteriae 155-74]
          Length = 330

 Score = 38.1 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLHLEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|15639153|ref|NP_218599.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025393|ref|YP_001933165.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094411|sp|O83195|SYP_TREPA RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|226701353|sp|B2S2A7|SYP_TREPS RecName: Full=Prolyl-tRNA synthetase; AltName: Full=Proline--tRNA
           ligase; Short=ProRS
 gi|3322426|gb|AAC65149.1| prolyl-tRNA synthetase (proS) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189017968|gb|ACD70586.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 617

 Score = 38.1 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 60/253 (23%), Gaps = 34/253 (13%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFSTELIIQDHIRKPLYL 78
           L  R+ I++ +RE       +E  +  +  +     +    R  +  L  ++ +   L  
Sbjct: 45  LRVRHKIEAIIREELEAIGCLECTAPVVTPAELWKESGRWYRMGAELLRAKNRLDHELLF 104

Query: 79  QTSPEFSCKKLLAAGEEKI-------FCFAHAWRNG---EQGCLHQPEFTMLEWYRAHES 128
             + E S   L+              +     +R+      G +   EFTM + Y  H  
Sbjct: 105 SPTAEESFTALVRGDCTSYKHFPLSLYQINAKYRDEIRPRYGLMRAREFTMADAYSFHTD 164

Query: 129 YEQLMKDCMNI-----------------IRCAAEVANQKIFSFQNVNCNPFSE----PEY 167
              L +                      +         +      V             +
Sbjct: 165 CACLARTYEKFAHAYRAIFRRIGLSVIAVHAHLGAMGGQESEEFMVESAVGDNTLLLCPH 224

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            T A    +           +    D H        A +R  H      I        + 
Sbjct: 225 CTYAANCEKAVGQRPLPDTHDTHLKDEHEGSDLKTPAAMREVHTPHVKTIEELEHFLHVP 284

Query: 228 PNLGINCCTILDR 240
            +  I        
Sbjct: 285 AHRCIKTLIYRID 297


>gi|240103206|ref|YP_002959515.1| phenylalanyl-tRNA synthetase subunit alpha [Thermococcus
           gammatolerans EJ3]
 gi|259511892|sp|C5A5Y9|SYFA_THEGJ RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|239910760|gb|ACS33651.1| Phenylalanyl-tRNA synthetase, alpha subunit (pheS) [Thermococcus
           gammatolerans EJ3]
          Length = 499

 Score = 37.7 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DRL M   G ++I 
Sbjct: 464 WGIGIDRLAMFKLGIDDIR 482


>gi|254173556|ref|ZP_04880228.1| phenylalanyl-tRNA synthetase alpha chain [Thermococcus sp. AM4]
 gi|214032248|gb|EEB73078.1| phenylalanyl-tRNA synthetase alpha chain [Thermococcus sp. AM4]
          Length = 499

 Score = 37.7 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DRL M   G ++I 
Sbjct: 464 WGIGIDRLAMFKLGIDDIR 482


>gi|315230169|ref|YP_004070605.1| phenylalanyl-tRNA synthetase subunit alpha [Thermococcus barophilus
           MP]
 gi|315183197|gb|ADT83382.1| phenylalanyl-tRNA synthetase alpha chain [Thermococcus barophilus
           MP]
          Length = 503

 Score = 37.7 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DRL M   G ++I 
Sbjct: 468 WGIGIDRLAMFKLGIDDIR 486


>gi|74314230|ref|YP_312649.1| asparagine synthetase AsnA [Shigella sonnei Ss046]
 gi|194435616|ref|ZP_03067719.1| aspartate--ammonia ligase [Escherichia coli 101-1]
 gi|256021234|ref|ZP_05435099.1| asparagine synthetase AsnA [Shigella sp. D9]
 gi|300932379|ref|ZP_07147644.1| aspartate--ammonia ligase [Escherichia coli MS 187-1]
 gi|332282461|ref|ZP_08394874.1| asparagine synthetase A [Shigella sp. D9]
 gi|123615768|sp|Q3YVP8|ASNA_SHISS RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|73857707|gb|AAZ90414.1| asparagine synthetase A [Shigella sonnei Ss046]
 gi|194425159|gb|EDX41143.1| aspartate--ammonia ligase [Escherichia coli 101-1]
 gi|300459884|gb|EFK23377.1| aspartate--ammonia ligase [Escherichia coli MS 187-1]
 gi|323167018|gb|EFZ52757.1| aspartate--ammonia ligase [Shigella sonnei 53G]
 gi|323173369|gb|EFZ58998.1| aspartate--ammonia ligase [Escherichia coli LT-68]
 gi|323959810|gb|EGB55460.1| aspartate-ammonia ligase [Escherichia coli H489]
 gi|323971223|gb|EGB66469.1| aspartate-ammonia ligase [Escherichia coli TA007]
 gi|332104813|gb|EGJ08159.1| asparagine synthetase A [Shigella sp. D9]
 gi|332345734|gb|AEE59068.1| aspartate--ammonia ligase AsnA [Escherichia coli UMNK88]
          Length = 330

 Score = 37.7 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|326784552|ref|YP_004324957.1| tRNA ligase [Prochlorococcus phage P-SSM7]
 gi|310004585|gb|ADO98977.1| tRNA ligase [Prochlorococcus phage P-SSM7]
          Length = 265

 Score = 37.7 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 52/182 (28%), Gaps = 16/182 (8%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDS----MSLQYSPGNETHIRAFSTELIIQDHIRKPLYL 78
            K +     LR +F+   F+E+ +      L      ET            ++      L
Sbjct: 8   RKYSDAVDLLRSFFLSKNFLEVHTQNRLSILAACEDPETVA--------TYNYGGNIWPL 59

Query: 79  QTSPEFSCKKLLAAG--EEKIFCFAHAWRNG--EQGCLHQPEFTMLEWYRAHESYEQLMK 134
             + +   +  L +   EE  FC + ++R         H+  F M E+       E  + 
Sbjct: 60  PQTGQMWLEHELLSNPKEEGFFCVSTSYRAEPNPVPGRHETIFPMFEFEMKGGVEELKLM 119

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDR 194
           +          +    I ++ +      ++       E   R    D            R
Sbjct: 120 EIELCEWLGLPLDKGNIQTYDDWTNQFNTKELDHDHEEKIGRGMITDFPEWTSPFWNMAR 179

Query: 195 HL 196
           + 
Sbjct: 180 NE 181


>gi|296080917|emb|CBI18747.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score = 37.7 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 8/115 (6%)

Query: 234 CCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQ 293
              I+  YP            D      F++    +             E+ +     ++
Sbjct: 31  RPVIIFNYPKKIKPFYMRVNDDGETVAAFDVV---VPKAGTLIRGSQNEERMNMLSTRIK 87

Query: 294 EKKKIYNE-TYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
           E      E  + +D           ++SG ++ F+ +V+  TG  N+ +VI  P 
Sbjct: 88  ELGIRSEEYEWYMDLR----RHGTVKNSGFSVAFEHVVLFATGLVNVADVIPFPR 138


>gi|269863796|ref|XP_002651348.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064691|gb|EED42708.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 175

 Score = 37.7 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 82  EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 133

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 134 GGIGKSRVVMFLLEARHIGEI 154


>gi|295095370|emb|CBK84460.1| aspartate-ammonia ligase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 330

 Score = 37.7 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 40/317 (12%), Positives = 86/317 (27%), Gaps = 39/317 (12%)

Query: 37  VENQFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAG 93
            +   IE+ +  L     G + ++     + ++ ++        +  S     ++ L   
Sbjct: 25  EKLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKTLPDAQFEVVHSLAKWKRQTLGQH 84

Query: 94  ----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
                E ++    A R        +H       +W R     E+ +    + +       
Sbjct: 85  DFSAGEGLYTHMKALRPDEDRLSPIHSVYVDQWDWERVMGDGERHVGTLKSTVEAIYAGI 144

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
                +           PE I    +               PD   +      A++ G  
Sbjct: 145 KATEAAVSKEFGLAPFLPETIHFVHSQE--------LLSRFPDLDAKGRERAIAKELGAV 196

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                    +      +   P+           Y        +I   +P     FEL + 
Sbjct: 197 FLIGIG-GKLSDGKRHDVRAPDYDDWSTVGESEY---AGLNGDILVWNPVLEDAFELSSM 252

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE-MPQSSGIAMG 325
            I                   ++++        +   ++      L    MPQ+ G  +G
Sbjct: 253 GIR------------VDAEALKRQLAV--TGDEDRLQLEWH--QALLRGEMPQTIGGGIG 296

Query: 326 FDRLVMLVTGANNINEV 342
             RL ML+   ++I +V
Sbjct: 297 QSRLTMLLLQLSHIGQV 313


>gi|320584113|gb|EFW98324.1| Mitochondrial phenylalanyl-tRNA synthetase alpha subunit [Pichia
           angusta DL-1]
          Length = 439

 Score = 37.7 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DR+ ML+ G  +I 
Sbjct: 299 FGIGLDRIAMLLFGIPDIR 317


>gi|218707390|ref|YP_002414909.1| asparagine synthetase AsnA [Escherichia coli UMN026]
 gi|293407381|ref|ZP_06651303.1| aspartate-ammonia ligase [Escherichia coli FVEC1412]
 gi|298383123|ref|ZP_06992718.1| aspartate-ammonia ligase [Escherichia coli FVEC1302]
 gi|226729504|sp|B7NF60|ASNA_ECOLU RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|218434487|emb|CAR15414.1| asparagine synthetase A [Escherichia coli UMN026]
 gi|291425672|gb|EFE98708.1| aspartate-ammonia ligase [Escherichia coli FVEC1412]
 gi|298276959|gb|EFI18477.1| aspartate-ammonia ligase [Escherichia coli FVEC1302]
          Length = 330

 Score = 37.7 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 39/324 (12%), Positives = 83/324 (25%), Gaps = 50/324 (15%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +    E
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWE 142

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                  +           P+ I    +    +               + L  +     G
Sbjct: 143 GIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLDAKGRERAIAKDLGAVFLVGIG 202

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY--PAPESALANIYPA---DPRFTK 260
            +++                   +         D +  P+              +P    
Sbjct: 203 GKLSDG-----------------HRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLED 245

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE-MPQ 318
            FEL +  I                   + ++        +   ++      L    MPQ
Sbjct: 246 AFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGEMPQ 289

Query: 319 SSGIAMGFDRLVMLVTGANNINEV 342
           + G  +G  RL ML+    +I +V
Sbjct: 290 TIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|20093711|ref|NP_613558.1| phenylalanyl-tRNA synthetase subunit alpha [Methanopyrus kandleri
           AV19]
 gi|24212442|sp|Q8TYM5|SYFA_METKA RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|19886602|gb|AAM01488.1| Phenylalanyl-tRNA synthetase alpha subunit [Methanopyrus kandleri
           AV19]
          Length = 524

 Score = 37.7 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
             +G +RL ML  G ++I +
Sbjct: 486 WGLGVERLAMLKLGIDDIRD 505


>gi|238853515|ref|ZP_04643891.1| aspartate--ammonia ligase [Lactobacillus gasseri 202-4]
 gi|238833873|gb|EEQ26134.1| aspartate--ammonia ligase [Lactobacillus gasseri 202-4]
          Length = 336

 Score = 37.7 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 76/265 (28%), Gaps = 44/265 (16%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
            + K+      E ++   +A R + +    H       +W +     E+ +    + ++ 
Sbjct: 89  LALKRYGFGMHEGLYTNMNAIRRDEDLDNFHSIYVDQWDWEKIISKDERNIDTLKDTVKQ 148

Query: 143 AAEVANQKIFS----FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
             +   +        + +      SE  +IT  E   R+ ++   T  +  D+  +    
Sbjct: 149 IFKAIKETEKEVAARYPSSTYRLPSEITFITTQELEDRWPDL---TPDEREDKIAKEKKA 205

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           +   + G ++                   P+ G                       D   
Sbjct: 206 VFLMKIGDKLKRSGK--------------PHDGRAP------------------DYDDWQ 233

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MP 317
                L+             +         + ++++         P  +  L      +P
Sbjct: 234 LNGDLLFWYEPLQRKLEISSMGIRVSEESLKTQLKKAHAEERAALPFHKMLLN---GELP 290

Query: 318 QSSGIAMGFDRLVMLVTGANNINEV 342
            + G  +G  RL ML+ G  +I EV
Sbjct: 291 YTIGGGIGQSRLCMLLLGKAHIGEV 315


>gi|116630339|ref|YP_815606.1| asparagine synthetase AsnA [Lactobacillus gasseri ATCC 33323]
 gi|116095921|gb|ABJ61073.1| aspartate-ammonia ligase [Lactobacillus gasseri ATCC 33323]
          Length = 353

 Score = 37.7 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 76/265 (28%), Gaps = 44/265 (16%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
            + K+      E ++   +A R + +    H       +W +     E+ +    + ++ 
Sbjct: 106 LALKRYGFGMHEGLYTNMNAIRRDEDLDNFHSIYVDQWDWEKIISKDERNIDTLKDTVKQ 165

Query: 143 AAEVANQKIFS----FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
             +   +        + +      +E  +IT  E   R+ ++   T  +  D+  +    
Sbjct: 166 IFKAIKETEKEVAARYPSSTYRLPNEITFITTQELEDRWPDL---TPDEREDKIAKEKKA 222

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           +   + G ++                   P+ G                       D   
Sbjct: 223 VFLMKIGDKLKRSGK--------------PHDGRAP------------------DYDDWQ 250

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MP 317
                L+             +         + ++++         P  +  L      +P
Sbjct: 251 LNGDLLFWYEPLQRKLEISSMGIRVSEESLKTQLKKAHAEERAALPFHKMLLN---GELP 307

Query: 318 QSSGIAMGFDRLVMLVTGANNINEV 342
            + G  +G  RL ML+ G  +I EV
Sbjct: 308 YTIGGGIGQSRLCMLLLGKAHIGEV 332


>gi|291059576|gb|ADD72311.1| prolyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 619

 Score = 37.7 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 60/253 (23%), Gaps = 34/253 (13%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYS---PGNETHIRAFSTELIIQDHIRKPLYL 78
           L  R+ I++ +RE       +E  +  +  +     +    R  +  L  ++ +   L  
Sbjct: 47  LRVRHKIEAIIREELEAIGCLECTAPVVTPAELWKESGRWYRMGAELLRAKNRLDHELLF 106

Query: 79  QTSPEFSCKKLLAAGEEKI-------FCFAHAWRNG---EQGCLHQPEFTMLEWYRAHES 128
             + E S   L+              +     +R+      G +   EFTM + Y  H  
Sbjct: 107 SPTAEESFTALVRGDCTSYKHFPLSLYQINAKYRDEIRPRYGLMRAREFTMADAYSFHTD 166

Query: 129 YEQLMKDCMNI-----------------IRCAAEVANQKIFSFQNVNCNPFSE----PEY 167
              L +                      +         +      V             +
Sbjct: 167 CACLARTYEKFAHAYRAIFRRIGLSVIAVHAHLGAMGGQESEEFMVESAVGDNTLLLCPH 226

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
            T A    +           +    D H        A +R  H      I        + 
Sbjct: 227 CTYAANCEKAVGQRPLPDTHDTHLKDEHEGSDLKTPAAMREVHTPHVKTIEELEHFLHVP 286

Query: 228 PNLGINCCTILDR 240
            +  I        
Sbjct: 287 AHRCIKTLIYRID 299


>gi|284929416|ref|YP_003421938.1| histidyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809860|gb|ADB95557.1| histidyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 432

 Score = 37.7 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 14/27 (51%), Gaps = 1/27 (3%)

Query: 308 DFLACLTEMP-QSSGIAMGFDRLVMLV 333
             +  L      + G A+G +RL+ML+
Sbjct: 289 HLIEELGGTSTPAVGWAIGVERLIMLL 315


>gi|269863633|ref|XP_002651291.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269863933|ref|XP_002651397.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269866889|ref|XP_002652424.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220062533|gb|EED41632.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064603|gb|EED42659.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064797|gb|EED42765.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 171

 Score = 37.7 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 78  EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 129

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 130 GGIGKSRVVMFLLEARHIGEI 150


>gi|302307211|ref|NP_983791.2| ADL305Cp [Ashbya gossypii ATCC 10895]
 gi|299788890|gb|AAS51615.2| ADL305Cp [Ashbya gossypii ATCC 10895]
          Length = 459

 Score = 37.7 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 6/36 (16%)

Query: 309 FLACLTEMPQ--SSGI--AMGFDRLVMLVTGANNIN 340
           +L            G    +G DR+ ML+    +I 
Sbjct: 305 YLNA--GFAPNTHVGWAFGLGLDRIAMLLFDIPDIR 338


>gi|83954743|ref|ZP_00963454.1| ATP phosphoribosyltransferase regulatory subunit [Sulfitobacter sp.
           NAS-14.1]
 gi|83841027|gb|EAP80198.1| ATP phosphoribosyltransferase regulatory subunit [Sulfitobacter sp.
           NAS-14.1]
          Length = 359

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 35/114 (30%), Gaps = 16/114 (14%)

Query: 22  LLKRNMIQS---SLREYFVENQFIEIDSMSLQYS------PGNETHIRAFSTELIIQDHI 72
           +  R+ I +   SLR  F       ++   LQ +       G +   RA+ T     D +
Sbjct: 1   MATRSDILAKAASLRSLFEAQGAAVVEPPILQPAETLLDLYGEDIRARAYVT----SDAM 56

Query: 73  RKPLYLQTS---PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           R    L+     P         A   +       +R  E+      E+    + 
Sbjct: 57  RGEQMLRPDYTLPVVQMHMAHGADPARYTYAGEVFRRQERDPNRANEYIQAGYE 110


>gi|301305607|ref|ZP_07211697.1| aspartate--ammonia ligase [Escherichia coli MS 124-1]
 gi|307313184|ref|ZP_07592809.1| aspartate/ammonia ligase [Escherichia coli W]
 gi|300839115|gb|EFK66875.1| aspartate--ammonia ligase [Escherichia coli MS 124-1]
 gi|306906867|gb|EFN37376.1| aspartate/ammonia ligase [Escherichia coli W]
 gi|315063054|gb|ADT77381.1| asparagine synthetase A [Escherichia coli W]
 gi|315254563|gb|EFU34531.1| aspartate--ammonia ligase [Escherichia coli MS 85-1]
 gi|323380884|gb|ADX53152.1| aspartate/ammonia ligase [Escherichia coli KO11]
          Length = 330

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKVLPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 140

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 141 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-----------AKGRERAI 189

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 190 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 242

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 243 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGE 286

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 287 MPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|269863346|ref|XP_002651188.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064981|gb|EED42868.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 128

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 35  EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 86

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 87  GGIGKSRVVMFLLEARHIGEI 107


>gi|209966825|ref|YP_002299740.1| histidyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209960291|gb|ACJ00928.1| histidyl-tRNA synthetasehisS [Rhodospirillum centenum SW]
          Length = 450

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 5   PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSM------SLQYSPGNETH 58
           P  P    +   RR+        +  ++R  +    F+ +++        L    G ET 
Sbjct: 6   PRTPPGTMELLPRRQIAFQ---RMLDTIRRGYERFGFLPVETPVFEVADVLLSKSGGETE 62

Query: 59  IRAFSTELII--QDHIRKPLYLQTSPEFSCKKLLAAGEEKI------FCFAHAWRNGEQG 110
            + +  +     +   R  L L+        + +A  E  +      +     +R     
Sbjct: 63  KQVYFVQSTGAIEQGHRPDLALRFDLTVPLARYVAEHERDLAFPFRRYQMQRVYRGERAQ 122

Query: 111 CLHQPEFTMLEWYRAHES 128
                EF   +     + 
Sbjct: 123 KGRYREFYQCDIDVIGKD 140


>gi|296242034|ref|YP_003649521.1| phenylalanyl-tRNA synthetase subunit alpha [Thermosphaera aggregans
           DSM 11486]
 gi|296094618|gb|ADG90569.1| phenylalanyl-tRNA synthetase, alpha subunit [Thermosphaera
           aggregans DSM 11486]
          Length = 514

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 2/24 (8%)

Query: 322 IAMGFDRLVMLVTGANNINEVIWT 345
             +G DRL M V G ++I   +  
Sbjct: 459 WGIGVDRLAMQVLGIDDIR--MLF 480


>gi|218702594|ref|YP_002410223.1| asparagine synthetase AsnA [Escherichia coli IAI39]
 gi|226729501|sp|B7NR46|ASNA_ECO7I RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|218372580|emb|CAR20454.1| asparagine synthetase A [Escherichia coli IAI39]
          Length = 330

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 39/324 (12%), Positives = 83/324 (25%), Gaps = 50/324 (15%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +    E
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSSLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWE 142

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                  +           P+ I    +    +               + L  +     G
Sbjct: 143 GIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPELDAKGRERAIAKDLGAVFLVGIG 202

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY--PAPESALANIYPA---DPRFTK 260
            +++                   +         D +  P+              +P    
Sbjct: 203 GKLSDG-----------------HRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLED 245

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE-MPQ 318
            FEL +  I                   + ++        +   ++      L    MPQ
Sbjct: 246 AFELSSMGIR------------VDADTLKHQLAL--TGDEDRLELEWH--QALLRGEMPQ 289

Query: 319 SSGIAMGFDRLVMLVTGANNINEV 342
           + G  +G  RL ML+    +I +V
Sbjct: 290 TIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|239614906|gb|EEQ91893.1| adhesin WI-1 [Ajellomyces dermatitidis ER-3]
          Length = 1171

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/194 (7%), Positives = 46/194 (23%), Gaps = 5/194 (2%)

Query: 93  GEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAH---ESYEQLMKDCMNIIRCAAEVANQ 149
             +        + + +    H+     L  Y      +       D  +           
Sbjct: 164 WFKWCSGHGRHFYDCKWDNDHEKYDWPLWQYWCGSHDKDPYNCEWDSSHEKYDWELWNKW 223

Query: 150 KIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVA 209
               +     +   + ++    +      N +  ++ +  D    +     +       +
Sbjct: 224 CKDPYNCEWDSSHEKYDWELWNKWCKDPYNCEWDSSHEKYDWELWNKWCKDSYNCEWDSS 283

Query: 210 HDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNI 269
           H+     ++++   +    N   +       +        + Y  D   +     +    
Sbjct: 284 HEKYDWGLWNKWCKDFY--NCEWDSSHEKYDWGLWNKWCKDPYNCDWDSSHEKFDWGLWS 341

Query: 270 ELCNACDELLDPIE 283
             CN  D+     E
Sbjct: 342 HWCNDYDKYPYNCE 355



 Score = 36.9 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/154 (7%), Positives = 40/154 (25%), Gaps = 6/154 (3%)

Query: 111 CLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYIT- 169
           C + P     +       ++   K C +   C  + +++K                    
Sbjct: 419 CTNNPYNCEWDSSHEKYDWDLWNKWCKDPYNCDWDSSHEKYDWELWDKWCKDPYNCDWDS 478

Query: 170 -----VAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIE 224
                  + + ++         D+  +     L+ +  +       D +      ++  +
Sbjct: 479 SHEKYDWDLWNKWCKDPYNCEWDSSHEKYDWELWDKWCKDLYNCEWDSSHEKYDWKLWDK 538

Query: 225 KIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
             + +   +     ++Y           P +  +
Sbjct: 539 WCKDSYNCDWDKFHEKYDWELWNKWCKDPYNCEW 572


>gi|331703582|ref|YP_004400269.1| Phenylalanyl tRNA synthetase subunit alpha [Mycoplasma mycoides
           subsp. capri LC str. 95010]
 gi|328802137|emb|CBW54291.1| Phenylalanyl tRNA synthetase alpha chain [Mycoplasma mycoides
           subsp. capri LC str. 95010]
          Length = 350

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 4/32 (12%)

Query: 313 LTEMPQ--SSG--IAMGFDRLVMLVTGANNIN 340
           L  +     SG    +G +R+ ML    +NI 
Sbjct: 301 LNGLDPNKCSGLAFGIGIERIAMLKFNISNIR 332


>gi|300711554|ref|YP_003737368.1| phenylalanyl-tRNA synthetase subunit alpha [Halalkalicoccus
           jeotgali B3]
 gi|299125237|gb|ADJ15576.1| phenylalanyl-tRNA synthetase subunit alpha [Halalkalicoccus
           jeotgali B3]
          Length = 499

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
             +  +RL ML+TGA +I +
Sbjct: 462 WGLALERLAMLITGAEDIRD 481


>gi|284173406|ref|ZP_06387375.1| phenylalanyl-tRNA synthetase subunit alpha [Sulfolobus solfataricus
           98/2]
 gi|261601716|gb|ACX91319.1| phenylalanyl-tRNA synthetase, alpha subunit [Sulfolobus
           solfataricus 98/2]
          Length = 465

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 6/23 (26%), Positives = 12/23 (52%), Gaps = 1/23 (4%)

Query: 319 SSG-IAMGFDRLVMLVTGANNIN 340
           ++G   +G +RL M     ++I 
Sbjct: 425 TAGAWGIGIERLAMSFLNISDIR 447


>gi|256384351|gb|ACU78921.1| phenylalanyl-tRNA synthetase, alpha subunit [Mycoplasma mycoides
           subsp. capri str. GM12]
 gi|256385183|gb|ACU79752.1| phenylalanyl-tRNA synthetase, alpha subunit [Mycoplasma mycoides
           subsp. capri str. GM12]
 gi|296455782|gb|ADH22017.1| phenylalanyl-tRNA synthetase, alpha subunit [synthetic Mycoplasma
           mycoides JCVI-syn1.0]
          Length = 350

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 4/32 (12%)

Query: 313 LTEMPQ--SSG--IAMGFDRLVMLVTGANNIN 340
           L  +     SG    +G +R+ ML    +NI 
Sbjct: 301 LNGLDPTKCSGLAFGIGIERIAMLKFNISNIR 332


>gi|124516418|gb|EAY57926.1| Phenylalanyl-tRNA synthetase alpha chain [Leptospirillum rubarum]
          Length = 519

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
             +G DR+ M+  G ++I +
Sbjct: 473 WGLGIDRMAMMRLGLSDIRD 492


>gi|83319370|ref|YP_424363.1| phenylalanyl-tRNA synthetase subunit alpha [Mycoplasma capricolum
           subsp. capricolum ATCC 27343]
 gi|91208194|sp|Q2SSA0|SYFA_MYCCT RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|83283256|gb|ABC01188.1| phenylalanyl-tRNA synthetase, alpha subunit [Mycoplasma capricolum
           subsp. capricolum ATCC 27343]
          Length = 350

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 4/32 (12%)

Query: 313 LTEMPQ--SSG--IAMGFDRLVMLVTGANNIN 340
           L  +     SG    +G +R+ ML    +NI 
Sbjct: 301 LNGLDPTKCSGLAFGIGIERIAMLKFNISNIR 332


>gi|15897061|ref|NP_341666.1| phenylalanyl-tRNA synthetase subunit alpha [Sulfolobus solfataricus
           P2]
 gi|2500991|sp|P95961|SYFA_SULSO RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|1707794|emb|CAA69551.1| phenylalanyl-tRNA synthetase alpha chain [Sulfolobus solfataricus
           P2]
 gi|13813230|gb|AAK40456.1| Phenylalanyl-tRNA synthetase alpha subunit (pheS) [Sulfolobus
           solfataricus P2]
          Length = 468

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 6/23 (26%), Positives = 12/23 (52%), Gaps = 1/23 (4%)

Query: 319 SSG-IAMGFDRLVMLVTGANNIN 340
           ++G   +G +RL M     ++I 
Sbjct: 428 TAGAWGIGIERLAMSFLNISDIR 450


>gi|227485296|ref|ZP_03915612.1| aspartate--ammonia ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236756|gb|EEI86771.1| aspartate--ammonia ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 335

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 286 HRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNINEV 342
            R  +++++   +    Y      L  L  +PQ+ G  +G  RL M     ++I EV
Sbjct: 260 ERLNEQLKQSGNLDRLKYNYHRMLLDDL--LPQTIGGGIGQSRLCMFFLQKSHIGEV 314


>gi|91213271|ref|YP_543257.1| asparagine synthetase AsnA [Escherichia coli UTI89]
 gi|117626015|ref|YP_859338.1| asparagine synthetase AsnA [Escherichia coli APEC O1]
 gi|218560819|ref|YP_002393732.1| asparagine synthetase AsnA [Escherichia coli S88]
 gi|237703545|ref|ZP_04534026.1| aspartate-ammonia ligase [Escherichia sp. 3_2_53FAA]
 gi|122421806|sp|Q1R4I8|ASNA_ECOUT RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|166219924|sp|A1AHS4|ASNA_ECOK1 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|226729499|sp|B7MGG4|ASNA_ECO45 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|91074845|gb|ABE09726.1| asparagine synthetase A [Escherichia coli UTI89]
 gi|115515139|gb|ABJ03214.1| asparagine synthetase AsnA [Escherichia coli APEC O1]
 gi|218367588|emb|CAR05372.1| asparagine synthetase A [Escherichia coli S88]
 gi|226902809|gb|EEH89068.1| aspartate-ammonia ligase [Escherichia sp. 3_2_53FAA]
 gi|294490941|gb|ADE89697.1| aspartate--ammonia ligase [Escherichia coli IHE3034]
 gi|307628818|gb|ADN73122.1| asparagine synthetase AsnA [Escherichia coli UM146]
 gi|315285539|gb|EFU44981.1| aspartate--ammonia ligase [Escherichia coli MS 110-3]
 gi|323949987|gb|EGB45871.1| aspartate-ammonia ligase [Escherichia coli H252]
 gi|323954961|gb|EGB50739.1| aspartate-ammonia ligase [Escherichia coli H263]
          Length = 330

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 39/324 (12%), Positives = 83/324 (25%), Gaps = 50/324 (15%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 23  LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG 82

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +    E
Sbjct: 83  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWE 142

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
                  +           P+ I    +    +               + L  +     G
Sbjct: 143 GIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPELDAKGRERAIAKDLGAVFLVGIG 202

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY--PAPESALANIYPA---DPRFTK 260
            +++                   +         D +  P+              +P    
Sbjct: 203 GKLSDG-----------------HRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLED 245

Query: 261 RFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE-MPQ 318
            FEL +  I                   + ++        +   ++      L    MPQ
Sbjct: 246 AFELSSMGIR------------VDADTLKHQLAL--TGDEDRLELEWH--QALLRGEMPQ 289

Query: 319 SSGIAMGFDRLVMLVTGANNINEV 342
           + G  +G  RL ML+    +I +V
Sbjct: 290 TIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|41615288|ref|NP_963786.1| phenylalanyl-tRNA synthetase subunit alpha [Nanoarchaeum equitans
           Kin4-M]
 gi|40069012|gb|AAR39347.1| NEQ505 [Nanoarchaeum equitans Kin4-M]
          Length = 483

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
             +G +RL M+  G ++I +
Sbjct: 447 FGIGINRLAMIALGIDDIRD 466


>gi|206603259|gb|EDZ39739.1| Phenylalanyl-tRNA synthetase alpha chain [Leptospirillum sp. Group
           II '5-way CG']
          Length = 519

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
             +G DR+ M+  G ++I +
Sbjct: 473 WGLGIDRMAMMRLGLSDIRD 492


>gi|269861697|ref|XP_002650541.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220065981|gb|EED43513.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 171

 Score = 37.7 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 78  EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 129

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 130 GGIGKSRVVMFLLEARHIGEI 150


>gi|238604850|ref|XP_002396310.1| hypothetical protein MPER_03484 [Moniliophthora perniciosa FA553]
 gi|215468612|gb|EEB97240.1| hypothetical protein MPER_03484 [Moniliophthora perniciosa FA553]
          Length = 77

 Score = 37.7 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 256 PRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLA-CLT 314
            R     E  AC   L     EL     +  R +   +  ++   +     + +L     
Sbjct: 1   MRVNDGGETVACFDLLIPGVGELAGGSVREEREDVLHRRMEECGLDAEGAYKWYLDLRRY 60

Query: 315 EMPQSSGIAMGFDRLV 330
                 G  MGF+RLV
Sbjct: 61  GGAPHVGFGMGFERLV 76


>gi|71030178|ref|XP_764731.1| phenylalanyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68351687|gb|EAN32448.1| phenylalanyl-tRNA synthetase, putative [Theileria parva]
          Length = 570

 Score = 37.7 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 6/30 (20%), Positives = 13/30 (43%), Gaps = 4/30 (13%)

Query: 314 TEMPQSSGI--AMGFDRLVMLVTGANNINE 341
             +    G    +G +RL M++    +I +
Sbjct: 424 EGLV--GGWAFGIGLERLAMVLCRIPDIRQ 451


>gi|57641105|ref|YP_183583.1| threonyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|73919819|sp|Q5JGC8|SYT_PYRKO RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|57159429|dbj|BAD85359.1| Threonyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 626

 Score = 37.7 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 72/283 (25%), Gaps = 50/283 (17%)

Query: 40  QFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEF------------S 85
             +E+++  +     P  E ++  F     +     K  +L+ +  F             
Sbjct: 254 GAMEVETPIMYDFEHPALEKYLNRFPARQYVVKSGDKKFFLRFAACFGQFLIKKDATISY 313

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
               L   E   + F         G      FTM + +      +Q M +     + + E
Sbjct: 314 RNLPLRMYELTRYSFRREKSGELSGLRRLRAFTMPDMHTVARDLKQAMDEFKKQYKLSME 373

Query: 146 VANQKIFSFQNVNC-----NPFSEPEYITVAE-------------AFARYANIDLGTTLD 187
           V      + ++          F E     + E                R+    L    +
Sbjct: 374 VLKGVGLTPEDYEVAIRFTRDFWEQNRDFIVELAKIIGKPVLIEMWDQRFFYFILKFEFN 433

Query: 188 NPDQPDRHLL-------YLQAQQAGIRVAHDDTWSD-----------IFSRILIEKIEPN 229
             D  D+             A++ GI+   ++                  R++   +E  
Sbjct: 434 FVDNLDKAAALSTVQIDVENAERFGIKYYDEEGKERTPLILHCSPSGAIERVMYAILEKQ 493

Query: 230 LGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
             +    I   YP   S +             + LY       
Sbjct: 494 AKLQEKGIKPMYPLWLSPIQVRVIPVSDEVMDYALYVAGKLEG 536


>gi|332796853|ref|YP_004458353.1| prolyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694588|gb|AEE94055.1| prolyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 481

 Score = 37.7 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 38/324 (11%), Positives = 84/324 (25%), Gaps = 47/324 (14%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSLQYSP----GNETHIRAFS-----TELIIQDHI 72
              R  + + +R++  E    E+    L         +E HI+ F           ++ +
Sbjct: 44  FKIRQNVINIIRKFLDETGHEEVLFPLLIPEYLLRKESE-HIKGFEGEVYWVTKGGEEDL 102

Query: 73  RKPLYLQTSPEFSCKKLLAAGE-------EKIFCFAHAWRNGEQGCLHQPEFTMLEWYRA 125
              L L+ + E +   + +          +K +     +R   +          +     
Sbjct: 103 DIRLALRPTSEVAITYMESLWIKSYKELPKKYYQIVSIFRYETKATRPMIRLREV---TT 159

Query: 126 HESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTT 185
            +    L     +  R       ++         +    P  ++    + R+A  +    
Sbjct: 160 FKEAHTLHVSYEDAERQV-----KEAIEIYKKIFDTLGIPYILSERPEWDRFAGAEHTYA 214

Query: 186 LDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAP- 244
            D      R L          ++         F++ L  KI+   G         Y    
Sbjct: 215 FDTLMPDGRAL----------QIGTVHHLGQHFTKALDYKIQKADGSLDYPYQTSYGISD 264

Query: 245 ----ESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKI-- 298
                S   N     P            I    A  E  +   + +  E + +       
Sbjct: 265 RVIAVSIAVNGDDHGPILNPIIAPIKVVIIPIPAKTEEDNKRVENYCKEIQEKLSSAGIS 324

Query: 299 -----YNETYPIDEDFLACLTEMP 317
                  E  P ++ +   +  +P
Sbjct: 325 AVVDSDKEKTPGEKFYYWEMKGVP 348


>gi|325958832|ref|YP_004290298.1| Phenylalanyl-tRNA synthetase subunit alpha [Methanobacterium sp.
           AL-21]
 gi|325330264|gb|ADZ09326.1| Phenylalanyl-tRNA synthetase alpha chain [Methanobacterium sp.
           AL-21]
          Length = 522

 Score = 37.7 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G +RL ML  G ++I 
Sbjct: 482 FGLGIERLAMLKLGISDIR 500


>gi|144575055|gb|AAZ43705.2| conserved hypothetical protein [Mycoplasma synoviae 53]
          Length = 111

 Score = 37.7 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 2/81 (2%)

Query: 72  IRKPLYLQTSPEFSCKKLLAA-GEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
           +    YL  S +F  + +L A     +    + +R  +    H  +F   E      +  
Sbjct: 18  LNYEFYLTDSMQFHLELMLRAKDISSVGYITNTFRGEQVDNRHLHQFNHFEIEMLG-NLN 76

Query: 131 QLMKDCMNIIRCAAEVANQKI 151
              +  ++ I+       +K 
Sbjct: 77  NCKEKIIDYIKFIVNELIKKH 97


>gi|18977361|ref|NP_578718.1| phenylalanyl-tRNA synthetase subunit alpha [Pyrococcus furiosus DSM
           3638]
 gi|23822213|sp|Q8U261|SYFA_PYRFU RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|18893042|gb|AAL81113.1| phenylalanyl-tRNA synthetase, alpha-subunit [Pyrococcus furiosus
           DSM 3638]
          Length = 499

 Score = 37.7 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DRL M   G ++I 
Sbjct: 464 WGIGIDRLAMFRLGIDDIR 482


>gi|71909776|ref|YP_287363.1| cytochrome c biogenesis protein, transmembrane region
           [Dechloromonas aromatica RCB]
 gi|71849397|gb|AAZ48893.1| Cytochrome c biogenesis protein, transmembrane region
           [Dechloromonas aromatica RCB]
          Length = 586

 Score = 37.7 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 9/34 (26%)

Query: 309 FLACLTEMPQSS-GI-----AMGFDRLVMLVTGA 336
           +L  L  +P  + G       +G    VML+TGA
Sbjct: 406 YLHALDPLPPHAKGWSRFWKGIGI---VMLLTGA 436


>gi|251772027|gb|EES52599.1| phenylalanyl-tRNA synthetase, alpha subunit [Leptospirillum
           ferrodiazotrophum]
          Length = 524

 Score = 37.7 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 7/20 (35%), Positives = 11/20 (55%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
             MG DR+ M   G ++I +
Sbjct: 474 WGMGIDRMAMFRLGLSDIRD 493


>gi|300121084|emb|CBK21466.2| unnamed protein product [Blastocystis hominis]
          Length = 917

 Score = 37.3 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 2   HQIPSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMS 48
           H+ P  P   RDF   +   +  R+ + S +R  F  +  +E+D+  
Sbjct: 444 HRKPKLPKGTRDFTPEQ---MAIRHRLFSQIRAVFERHGGVELDTPV 487


>gi|269866159|ref|XP_002652176.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220063015|gb|EED41880.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 275

 Score = 37.3 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 196 EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 247

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 248 GGIGKSRVVMFLLEARHIGEI 268


>gi|269864812|ref|XP_002651705.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064032|gb|EED42351.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 287

 Score = 37.3 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 196 EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 247

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 248 GGIGKSRVVMFLLEARHIGEI 268


>gi|269861458|ref|XP_002650436.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269866011|ref|XP_002652124.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220063111|gb|EED41932.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220066115|gb|EED43618.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 289

 Score = 37.3 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 196 EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 247

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 248 GGIGKSRVVMFLLEARHIGEI 268


>gi|19746488|ref|NP_607624.1| asparagine synthetase AsnA [Streptococcus pyogenes MGAS8232]
 gi|21910726|ref|NP_664994.1| asparagine synthetase AsnA [Streptococcus pyogenes MGAS315]
 gi|28895584|ref|NP_801934.1| asparagine synthetase AsnA [Streptococcus pyogenes SSI-1]
 gi|71903869|ref|YP_280672.1| asparagine synthetase AsnA [Streptococcus pyogenes MGAS6180]
 gi|94988893|ref|YP_596994.1| asparagine synthetase AsnA [Streptococcus pyogenes MGAS9429]
 gi|94992785|ref|YP_600884.1| asparagine synthetase AsnA [Streptococcus pyogenes MGAS2096]
 gi|94994772|ref|YP_602870.1| asparagine synthetase AsnA [Streptococcus pyogenes MGAS10750]
 gi|306827012|ref|ZP_07460310.1| aspartate-ammonia ligase [Streptococcus pyogenes ATCC 10782]
 gi|54036769|sp|P63626|ASNA_STRP8 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|54040838|sp|P63625|ASNA_STRP3 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|123639584|sp|Q48SJ3|ASNA_STRPM RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|166219930|sp|Q1JAR8|ASNA_STRPB RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|166219931|sp|Q1JKW9|ASNA_STRPC RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|166219933|sp|Q1J5R0|ASNA_STRPF RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|19748694|gb|AAL98123.1| putative asparagine synthetase A [Streptococcus pyogenes MGAS8232]
 gi|21904929|gb|AAM79797.1| putative asparagine synthetase A [Streptococcus pyogenes MGAS315]
 gi|28810833|dbj|BAC63767.1| putative asparagine synthetase A [Streptococcus pyogenes SSI-1]
 gi|71802964|gb|AAX72317.1| aspartate--ammonia ligase [Streptococcus pyogenes MGAS6180]
 gi|94542401|gb|ABF32450.1| aspartate--ammonia ligase [Streptococcus pyogenes MGAS9429]
 gi|94546293|gb|ABF36340.1| Aspartate--ammonia ligase [Streptococcus pyogenes MGAS2096]
 gi|94548280|gb|ABF38326.1| Aspartate--ammonia ligase [Streptococcus pyogenes MGAS10750]
 gi|304430758|gb|EFM33769.1| aspartate-ammonia ligase [Streptococcus pyogenes ATCC 10782]
          Length = 330

 Score = 37.3 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 35/322 (10%), Positives = 78/322 (24%), Gaps = 42/322 (13%)

Query: 34  EYFVEN-QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           +Y +     +E+    L               +  + +   I          L      +
Sbjct: 21  QYLIAKLDVVEVQGPILSRVGDGMQDNLSGTENPVSVNVLKIPNATFEVVHSLAKWKRHT 80

Query: 86  CKKLLAAGEEKIFCFAHAWRNGE--QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
             +      E +     A R  E      H       +W +     ++ +      +   
Sbjct: 81  LARFGFNEGEGLVVNMKALRPDEDSLDQTHSVYVDQWDWEKVIPDGKRNLAYLKETVETI 140

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
            +V      + +         P+ IT        A     T  +  +   +    +    
Sbjct: 141 YKVIRLTELAVEARYDIEAVLPKKITFIHTEELVAKYPDLTPKERENAITKEFGAVFLIG 200

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G  +                              D +        +    D        
Sbjct: 201 IGGVLPDG-----------------KPHDGRAPDYDDWTTETENGYHGLNGD-------- 235

Query: 264 LYACNIELCNACD-ELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACLTEMPQSS 320
           +   N +L +A +   +         +++++       +    D     L  L   P + 
Sbjct: 236 ILVWNDQLGSAFELSSMGIRVDEEALKRQVEM--TGDQDRLAFDWHKSLLNGL--FPLTI 291

Query: 321 GIAMGFDRLVMLVTGANNINEV 342
           G  +G  R+VM +    +I EV
Sbjct: 292 GGGIGQSRMVMFLLRKKHIGEV 313


>gi|227872102|ref|ZP_03990475.1| aspartate--ammonia ligase [Oribacterium sinus F0268]
 gi|227842051|gb|EEJ52308.1| aspartate--ammonia ligase [Oribacterium sinus F0268]
          Length = 335

 Score = 37.3 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 81/265 (30%), Gaps = 45/265 (16%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHE----SYEQLMKDCMN 138
            + ++      E ++   +A R + E   LH       +W R       + E L     +
Sbjct: 89  IALQRYNFQIGEGLYTNMNAIRRDEELDNLHSCYVDQWDWERVIGKDERTEEVLQNTVRD 148

Query: 139 IIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
           I R    + ++  + + +       E  +I   E   RY N+   +  +  +   +    
Sbjct: 149 IFRIIKHMEHEVWYKYPDAVKKLPEEIYFIDSEELLKRYPNL---SPKERENAITKEHGC 205

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           +  Q+ G ++++                EP+ G                       D   
Sbjct: 206 VFIQRIGDKLSNG---------------EPHDGRAP------------------DYDDWS 232

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MP 317
                L+      C      +         E++++          P  +     L   +P
Sbjct: 233 LNGDILFWFETLNCALEISSMGIRVDEKALERQLKLSHNEDRAKLPYHKML---LEGKLP 289

Query: 318 QSSGIAMGFDRLVMLVTGANNINEV 342
           Q+ G  +G  RL ML+    ++ EV
Sbjct: 290 QTIGGGIGQSRLCMLLLDRAHVGEV 314


>gi|139473440|ref|YP_001128156.1| asparagine synthetase AsnA [Streptococcus pyogenes str. Manfredo]
 gi|166219934|sp|A2RDJ5|ASNA_STRPG RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|134271687|emb|CAM29920.1| aspartate--ammonia ligase [Streptococcus pyogenes str. Manfredo]
          Length = 330

 Score = 37.3 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 35/322 (10%), Positives = 78/322 (24%), Gaps = 42/322 (13%)

Query: 34  EYFVEN-QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           +Y +     +E+    L               +  + +   I          L      +
Sbjct: 21  QYLIAKLDVVEVQGPILSRVGDGMQDNLSGTENPVSVNVLKIPNATFEVVHSLAKWKRHT 80

Query: 86  CKKLLAAGEEKIFCFAHAWRNGE--QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
             +      E +     A R  E      H       +W +     ++ +      +   
Sbjct: 81  LARFGFNEGEGLVVNMKALRPDEDSLDQTHSVYVDQWDWEKVIPDGKRNLAYLKETVETI 140

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
            +V      + +         P+ IT        A     T  +  +   +    +    
Sbjct: 141 YKVIRLTELAVEARYDIEAVLPKKITFIHTEELVAEYPDLTPKERENAITKEFGAVFLIG 200

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G  +                              D +        +    D        
Sbjct: 201 IGGVLPDG-----------------KPHDGRAPDYDDWTTETENGYHGLNGD-------- 235

Query: 264 LYACNIELCNACD-ELLDPIEQRHRFEKEMQEKKKIYNETYPIDED--FLACLTEMPQSS 320
           +   N +L +A +   +         +++++       +    D     L  L   P + 
Sbjct: 236 ILVWNDQLGSAFELSSMGIRVDEEALKRQVEM--TGDQDRLAFDWHKSLLNGL--FPLTI 291

Query: 321 GIAMGFDRLVMLVTGANNINEV 342
           G  +G  R+VM +    +I EV
Sbjct: 292 GGGIGQSRMVMFLLRKKHIGEV 313


>gi|269864390|ref|XP_002651556.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064305|gb|EED42500.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 288

 Score = 37.3 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 196 EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 247

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 248 GGIGKSRVVMFLLEARHIGEI 268


>gi|104162038|emb|CAJ75746.1| histidyl-tRNA synthetase [uncultured Thermotogales bacterium]
          Length = 424

 Score = 37.3 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 318 QSSGIAMGFDRLVMLVTGANNIN 340
            + G A+G +R+VML+  + N+ 
Sbjct: 300 PAVGFAIGLERIVMLL-KSENVR 321


>gi|320101157|ref|YP_004176749.1| phenylalanyl-tRNA synthetase subunit alpha [Desulfurococcus mucosus
           DSM 2162]
 gi|319753509|gb|ADV65267.1| phenylalanyl-tRNA synthetase, alpha subunit [Desulfurococcus
           mucosus DSM 2162]
          Length = 514

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 2/24 (8%)

Query: 322 IAMGFDRLVMLVTGANNINEVIWT 345
             +G DRL M V G ++I   +  
Sbjct: 459 WGIGVDRLAMTVLGLDDIR--LLF 480


>gi|83943742|ref|ZP_00956200.1| ATP phosphoribosyltransferase regulatory subunit [Sulfitobacter sp.
           EE-36]
 gi|83845422|gb|EAP83301.1| ATP phosphoribosyltransferase regulatory subunit [Sulfitobacter sp.
           EE-36]
          Length = 359

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 35/114 (30%), Gaps = 16/114 (14%)

Query: 22  LLKRNMIQS---SLREYFVENQFIEIDSMSLQYS------PGNETHIRAFSTELIIQDHI 72
           +  R+ I +   SLR  F       ++   LQ +       G +   RA+ T     D +
Sbjct: 1   MATRSDILAKAASLRAMFEAQGAAVVEPPILQPAETLLDLYGEDIRARAYVT----SDAM 56

Query: 73  RKPLYLQTS---PEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           R    L+     P         A   +       +R  E+      E+    + 
Sbjct: 57  RGEQMLRPDYTLPVVQMHMAHGADPARYTYAGEVFRRQERDPNRANEYIQAGYE 110


>gi|269862887|ref|XP_002651014.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269864886|ref|XP_002651730.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220063983|gb|EED42326.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220065266|gb|EED43042.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 220

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 127 EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 178

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 179 GGIGKSRVVMFLLEARHIGEI 199


>gi|86170496|ref|XP_966027.1| phenylalanyl-tRNA synthetase subunit [Plasmodium falciparum 3D7]
 gi|46362269|emb|CAG25207.1| phenylalanyl-tRNA synthetase subunit [Plasmodium falciparum 3D7]
          Length = 443

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G +RL ML+   N+I 
Sbjct: 309 FGIGLERLCMLLYDINDIR 327


>gi|269864799|ref|XP_002651701.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064041|gb|EED42355.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 292

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 196 EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 247

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 248 GGIGKSRVVMFLLEARHIGEI 268


>gi|269866435|ref|XP_002652273.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220062836|gb|EED41783.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 311

 Score = 37.3 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 218 EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 269

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 270 GGIGKSRVVMFLLEARHIGEI 290


>gi|269863045|ref|XP_002651073.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269863962|ref|XP_002651406.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269864002|ref|XP_002651420.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|269865987|ref|XP_002652116.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220063127|gb|EED41940.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064557|gb|EED42636.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220064583|gb|EED42650.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220065167|gb|EED42983.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 253

 Score = 37.3 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 160 EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 211

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 212 GGIGKSRVVMFLLEARHIGEI 232


>gi|295696884|ref|YP_003590122.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295412486|gb|ADG06978.1| threonyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 641

 Score = 37.3 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 7/28 (25%), Positives = 16/28 (57%)

Query: 22  LLKRNMIQSSLREYFVENQFIEIDSMSL 49
           ++ RN ++  +RE+  E  + E+ +  L
Sbjct: 276 MVIRNELERFMREFLNEYDYEEVKTPIL 303


>gi|46446339|ref|YP_007704.1| phenylalanine-tRNA ligase alpha chain [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|81627335|sp|Q6MDC0|SYFA_PARUW RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|46399980|emb|CAF23429.1| probable phenylalanine-tRNA ligase alpha chain [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 346

 Score = 37.3 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 3/27 (11%)

Query: 317 PQS-SG--IAMGFDRLVMLVTGANNIN 340
           P+  SG    MG +RLVM++ G  +I 
Sbjct: 304 PEHYSGFAWGMGLERLVMMLRGIQDIR 330


>gi|315425704|dbj|BAJ47360.1| histidyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 349

 Score = 37.3 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 41/345 (11%), Positives = 93/345 (26%), Gaps = 44/345 (12%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
                +  I   +RE +    + E+++ +L        ++  F  +      IR  +++ 
Sbjct: 15  EEFAVKQRIVDVIREIYRLYGYEEVETPTL-------EYLELFEAKSGE--EIRHRMFVF 65

Query: 80  TSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNI 139
             P     + L    E     A      +      P               Q  +     
Sbjct: 66  DDP---HGRKLVLRPEVTASVARLV-ASKLSRRPLPLRLGYIADCYRYDEPQWGRRRRFW 121

Query: 140 IRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFAR--YANIDLGTTLDNPDQPDRHLL 197
                   ++   S   +        + + + E   +  +  I  G   +   +    +L
Sbjct: 122 QGGLELFGSRDPMSDAEIILASRDVFQRLGLVEQRFKIGHVGIMRGIMDNVEQKTQDIIL 181

Query: 198 YLQAQQAG------IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALAN- 250
            L  ++        +    D    +   R+   +    +      ++  +P    +L N 
Sbjct: 182 SLIDRKMFTEARQLMEQHLDKDAVETLWRLAEHRGGLEVVERARDMVSPWPKAMQSLENL 241

Query: 251 ------IYPADPRFTKRFEL-YACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETY 303
                 I   DP  +   +L +A  +E           +    + E E            
Sbjct: 242 ETIVSLIMNVDPNISIEVDLGFARGLEYYTG-------MIFEQKLEGEQLSFNGGGR--- 291

Query: 304 PIDEDFLACLTEMP-QSSGIAMGFDRLVMLVTGANNINEVIWTPF 347
             D   +      P  + G ++G  R+ M + G     +    P 
Sbjct: 292 -YD-GLVELFGGKPTPAVGCSIGITRIQMHLLGRKT--QTTPFPQ 332


>gi|269866022|ref|XP_002652128.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220063104|gb|EED41928.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 311

 Score = 37.3 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 218 EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 269

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM +  A +I E+
Sbjct: 270 GGIGKSRVVMFLLEARHIGEI 290


>gi|300902974|ref|ZP_07120917.1| aspartate--ammonia ligase [Escherichia coli MS 84-1]
 gi|300404969|gb|EFJ88507.1| aspartate--ammonia ligase [Escherichia coli MS 84-1]
          Length = 316

 Score = 37.3 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 87/327 (26%), Gaps = 56/327 (17%)

Query: 36  FVEN-QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQTSPEFSCKKLLA 91
             E    IE+ +  L     G + ++     + ++ ++        +  S     ++ L 
Sbjct: 9   LEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKVLPDAQFEVVHSLAKWKRQTLG 68

Query: 92  AG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                  E ++    A R        LH       +W R     E+      + +   A 
Sbjct: 69  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVE--AI 126

Query: 146 VANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQ 200
            A  K            +        ++   E  +RY ++D            +      
Sbjct: 127 WAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-----------AKGRERAI 175

Query: 201 AQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPA---DPR 257
           A+  G           +      +   P+            P+              +P 
Sbjct: 176 AKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAGLNGDILVWNPV 228

Query: 258 FTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TE- 315
               FEL +  I                   + ++        +   ++      L    
Sbjct: 229 LEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLEWH--QALLRGE 272

Query: 316 MPQSSGIAMGFDRLVMLVTGANNINEV 342
           MPQ+ G  +G  RL ML+    +I +V
Sbjct: 273 MPQTIGGGIGQSRLTMLLLQLPHIGQV 299


>gi|187730769|ref|YP_001882419.1| asparagine synthetase AsnA [Shigella boydii CDC 3083-94]
 gi|226729518|sp|B2TUN1|ASNA_SHIB3 RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|187427761|gb|ACD07035.1| aspartate--ammonia ligase [Shigella boydii CDC 3083-94]
          Length = 330

 Score = 37.3 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 44/338 (13%), Positives = 91/338 (26%), Gaps = 60/338 (17%)

Query: 29  QSSLREYFVEN-----QFIEIDSMSLQYSP-GNETHIR--AFSTELIIQDHIRKPLYLQT 80
            S ++ +F          IE+ +  L     G + ++     + ++ ++        +  
Sbjct: 12  ISFVKSHFSRQLEECLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVH 71

Query: 81  SPEFSCKKLLAAG----EEKIFCFAHAWR--NGEQGCLHQPEFTMLEWYRAHESYEQLMK 134
           S     ++ L        E ++    A R        LH       +W R     E+   
Sbjct: 72  SLAKWKRQTLGQHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFS 131

Query: 135 DCMNIIRCAAEVANQKIFSFQNVNCNPFSEP-----EYITVAEAFARYANIDLGTTLDNP 189
              + +   A  A  K            +        ++   E  +RY ++D        
Sbjct: 132 TLKSTVE--AIWAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLD-------- 181

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
               +      A+  G           +      +   P+            P+      
Sbjct: 182 ---AKGRERAIAKDLGAVFLVGIG-GKLSDGHRHDVRAPDYDDWST------PSELGHAG 231

Query: 250 NIYPA---DPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPID 306
                   +P     FEL +  I                   + ++        +   ++
Sbjct: 232 LNGDILVWNPVLEDAFELSSMGIR------------VDADTLKHQLAL--TGDEDRLQLE 277

Query: 307 EDFLACL-TE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
                 L    MPQ+ G  +G  RL ML+    +I +V
Sbjct: 278 WH--QALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQV 313


>gi|156085651|ref|XP_001610235.1| phenylalanine-tRNA ligase [Babesia bovis T2Bo]
 gi|154797487|gb|EDO06667.1| phenylalanine-tRNA ligase, putative [Babesia bovis]
          Length = 448

 Score = 37.3 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 6/24 (25%), Positives = 12/24 (50%), Gaps = 2/24 (8%)

Query: 320 SGI--AMGFDRLVMLVTGANNINE 341
            G    +G +RL M++    +I +
Sbjct: 300 GGWAFGLGLERLAMVLCNITDIRQ 323


>gi|282163066|ref|YP_003355451.1| threonyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155380|dbj|BAI60468.1| threonyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 636

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 37/137 (27%), Gaps = 14/137 (10%)

Query: 37  VENQFIEIDSMSL--QYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEF---------- 84
            +   +E+++  +     P  + ++  F          +K L+L+ +  F          
Sbjct: 256 AKKGAMEVETPIMYDMEHPTLKKYLDRFPARQYTVIADKKNLFLRFAACFGQFLMSHDMT 315

Query: 85  --SCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
                  L   E   + F    R    G      FTM + +           +  +    
Sbjct: 316 ISYKNLPLKMIELTRYSFRKEQRGELVGLRRLRAFTMPDMHTLCADMAGATSEFRDQYEM 375

Query: 143 AAEVANQKIFSFQNVNC 159
                +    + ++   
Sbjct: 376 CINTLDTIGLTLKDYEV 392


>gi|150016422|ref|YP_001308676.1| histidyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|149902887|gb|ABR33720.1| histidyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 417

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 29/254 (11%), Positives = 59/254 (23%), Gaps = 31/254 (12%)

Query: 86  CKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
            +    A   K++    A+R          +F          +   +  + + +     +
Sbjct: 95  NRLFNEAQPTKLYYITPAFRYENVQKGRLRQFHQCGLEVFGSNAASMDAEVIAVAMDTLK 154

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
               K  S    N             EA  ++   +     D                  
Sbjct: 155 ELGLKSLSLNINNL--GCPSCRPKYNEALKKFLADNYDGLCDTCKDRFEKNPMRILDCKE 212

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELY 265
            +       + I    + E+   +                  L   Y  DP   +  + Y
Sbjct: 213 KKCHEITKNAPIILDYVCEECSTHFNKVKEY--------LDILGLPYTIDPGIVRGLDYY 264

Query: 266 ACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMG 325
              I      D  +    +  +  +E+                          + G  MG
Sbjct: 265 TKTIFEILTSDFTVCGGGRYDKLIEEL------GGPDM--------------PAVGFGMG 304

Query: 326 FDRLVMLVTGANNI 339
            +RL+M +    NI
Sbjct: 305 VERLIMTL-EKENI 317


>gi|71032061|ref|XP_765672.1| histidyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68352629|gb|EAN33389.1| histidyl-tRNA synthetase, putative [Theileria parva]
          Length = 943

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 94/335 (28%), Gaps = 43/335 (12%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMS--LQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
           L R ++ SS+++ F ++  +EI++    L+ +     +         ++D   + L L+ 
Sbjct: 495 LTRRVVISSIKDIFRQHGAVEIETPVFELKETLLG-KYGEDQKLIFDLKDQGGEQLSLRY 553

Query: 81  SPEFSCKKLLAAGEEKIFC---FAHAWRNG--EQGCLHQPEFTMLEWYRAHESYEQLMKD 135
                  + +A  + +          +R    +       EF   +   A E  + +   
Sbjct: 554 DLTVPFARFVAMNKMEKIKRFHIGKVYRRDEPQLARGRYREFYQCDLDCAGEYPKMVPDA 613

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            +  I        +       VN     +   +      + +  I       + D+ D+ 
Sbjct: 614 EIIFILVRVLRLLKGGSFAVRVNHRAILDAVLLHCGVEVSMHRTI-----CSSIDKLDKL 668

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIE--KIEPNLGINCCTILDRYPAPESALANIYP 253
                  +        +  +D     +         L       +       S  +    
Sbjct: 669 PWDKVKLEMTSEKGLPEYIADKIKEFIEINGTFTEVLEKLRDKNVTTLTKDSSVTSVKDK 728

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL--- 310
           +D        L         +  E     E    F  +M   + +   T  I E FL   
Sbjct: 729 SDGNVLDEMALLW-------SYLEAFGVKESEVMF--DMSLARGLDYYTGVIFEAFLKDE 779

Query: 311 -----------ACLTEM-----PQSSGIAMGFDRL 329
                        L  M       + G+++G +RL
Sbjct: 780 EVGSVGAGGRYDGLIGMFSGKNVPAVGMSVGIERL 814


>gi|110639058|ref|YP_679267.1| histidyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123354414|sp|Q11RN9|SYH_CYTH3 RecName: Full=Histidyl-tRNA synthetase; AltName:
          Full=Histidine--tRNA ligase; Short=HisRS
 gi|110281739|gb|ABG59925.1| histidyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 453

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 5  PSQPWWNRDFHYRRRPFLLKRNMIQSSLREYFVENQFIEIDSMSL 49
          PS P   RDF   +   +LKR  +  ++RE F +  F+ I++ ++
Sbjct: 4  PSLPKGTRDFGPAQ---MLKRQYLLQTIREIFTKYGFLPIETPAM 45


>gi|22074735|gb|AAM08124.1| Lysyl-tRNA synthetase [Gallus gallus]
          Length = 249

 Score = 36.9 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 15/42 (35%), Gaps = 13/42 (30%)

Query: 1   MHQIPSQPWW--NRDFHYRRRPF-----------LLKRNMIQ 29
           +H +P   +   +++  YR+R              + R  I 
Sbjct: 207 LHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIV 248


>gi|18312639|ref|NP_559306.1| phenylalanyl-tRNA synthetase subunit alpha [Pyrobaculum aerophilum
           str. IM2]
 gi|24212452|sp|Q8ZX61|SYFA_PYRAE RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|18160112|gb|AAL63488.1| phenylalanyl-tRNA synthetase alpha subunit [Pyrobaculum aerophilum
           str. IM2]
          Length = 489

 Score = 36.9 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
              G DR+ M++ G ++I E
Sbjct: 438 WGWGLDRIAMILLGIDDIRE 457


>gi|255723832|ref|XP_002546845.1| phenylalanyl-tRNA synthetase, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240134736|gb|EER34290.1| phenylalanyl-tRNA synthetase, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 442

 Score = 36.9 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DR+ ML+ G  +I 
Sbjct: 308 FGIGLDRIAMLLFGIPDIR 326


>gi|171911357|ref|ZP_02926827.1| phenylalanyl-tRNA synthetase, alpha subunit [Verrucomicrobium
           spinosum DSM 4136]
          Length = 338

 Score = 36.9 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             MG DRL M++ G  +I 
Sbjct: 307 FGMGLDRLAMILHGITDIR 325


>gi|126459409|ref|YP_001055687.1| phenylalanyl-tRNA synthetase subunit alpha [Pyrobaculum
           calidifontis JCM 11548]
 gi|166226918|sp|A3MUA4|SYFA_PYRCJ RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|126249130|gb|ABO08221.1| phenylalanyl-tRNA synthetase, alpha subunit [Pyrobaculum
           calidifontis JCM 11548]
          Length = 488

 Score = 36.9 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
              G DR+ M++ G ++I +
Sbjct: 437 WGWGLDRVAMILLGIDDIRD 456


>gi|311110050|ref|ZP_07711447.1| aspartate--ammonia ligase [Lactobacillus gasseri MV-22]
 gi|311065204|gb|EFQ45544.1| aspartate--ammonia ligase [Lactobacillus gasseri MV-22]
          Length = 353

 Score = 36.9 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 76/265 (28%), Gaps = 44/265 (16%)

Query: 84  FSCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRC 142
            + K+      E ++   +A R + +    H       +W +     E+ +    + ++ 
Sbjct: 106 LALKRYRFGMHEGLYTNMNAIRRDEDLDNFHSIYVDQWDWEKIISKDERNIDTLKDTVKQ 165

Query: 143 AAEVANQKIFS----FQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLY 198
             +   +        + +      +E  +IT  E   R+ ++   T  +  D+  +    
Sbjct: 166 IFKAIKETEKEVAARYPSSTYRLPNEITFITTQELEDRWPDL---TPDEREDKIAKEKKA 222

Query: 199 LQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRF 258
           +   + G ++                   P+ G                       D   
Sbjct: 223 VFLMKIGDKLKRSGK--------------PHDGRAP------------------DYDDWQ 250

Query: 259 TKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MP 317
                L+             +         + ++++         P  +  L      +P
Sbjct: 251 LNGDLLFWYEPLQRKLEISSMGIRVSEESLKTQLKKAHAEERAALPFHKMLLN---GELP 307

Query: 318 QSSGIAMGFDRLVMLVTGANNINEV 342
            + G  +G  RL ML+ G  +I EV
Sbjct: 308 YTIGGGIGQSRLCMLLLGKAHIGEV 332


>gi|227515394|ref|ZP_03945443.1| conserved hypothetical protein [Lactobacillus fermentum ATCC 14931]
 gi|227086246|gb|EEI21558.1| conserved hypothetical protein [Lactobacillus fermentum ATCC 14931]
          Length = 83

 Score = 36.9 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
            ++++++         P   D LA     MP + G  +G  RL ML+ G  ++ EV
Sbjct: 10  MKEQLEKAHATDRAELPFHRDLLA---GKMPYTIGGGIGQSRLCMLLLGKAHVGEV 62


>gi|269867138|ref|XP_002652500.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220062360|gb|EED41556.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 222

 Score = 36.9 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 9/83 (10%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + +K  Y     +       L  + P + G
Sbjct: 127 EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRKAEYEFHRGV-------LEGVIPPTIG 178

Query: 322 IAMGFDRLVMLVTGANNINEVIW 344
             +G  R+VM +  A +I E+  
Sbjct: 179 GGIGKSRVVMFLLXARHIGEIQP 201


>gi|145590652|ref|YP_001152654.1| phenylalanyl-tRNA synthetase subunit alpha [Pyrobaculum arsenaticum
           DSM 13514]
 gi|166226917|sp|A4WHY5|SYFA_PYRAR RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|145282420|gb|ABP50002.1| phenylalanyl-tRNA synthetase, alpha subunit [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 488

 Score = 36.9 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
              G DR+ M++ G ++I E
Sbjct: 437 WGWGLDRIAMILLGIDDIRE 456


>gi|297799866|ref|XP_002867817.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313653|gb|EFH44076.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 479

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 6/24 (25%), Positives = 12/24 (50%), Gaps = 2/24 (8%)

Query: 322 IAMGFDRLVMLVTGANNINEVIWT 345
             +G +R  M++ G +NI +    
Sbjct: 439 WGLGLERPTMILYGIDNIRD--LF 460


>gi|197294530|ref|YP_001799071.1| histidyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|226737076|sp|B1VA46|SYH_PHYAS RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|171853857|emb|CAM11819.1| Histidyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 415

 Score = 36.9 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 92/322 (28%), Gaps = 40/322 (12%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSC 86
            +++S   +F ++QF EI +  +        +   F       + + K  Y         
Sbjct: 21  KVENSFHSFFKKHQFQEIRTPIM-------EYAEVFHRAAQHSEMVSKETYAFPDK---K 70

Query: 87  KKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV 146
            +L+    E       ++   +       +     +Y  +  YE+               
Sbjct: 71  NRLITLRPEGTAGIVRSYIENKLDQ--TNKLQKFYYYGPYFRYERPQFGRYRQFHQLGVE 128

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPD-QPDRHLLYLQAQQAG 205
              K          PF + E IT+   F +   +D  T   N     + HL Y+   +  
Sbjct: 129 VLGK--------TTPFLDIEVITLIYQFLKSLGLDDITIQINSLGSKEDHLDYVDIFKQY 180

Query: 206 IRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANI--YPADPRFTKRFE 263
           +++  +        R+          +        +       A        P+  KRF+
Sbjct: 181 LKIYSNYLCGLCHERLN------KNPLRIWDCKTCHLQDFLKQAPKIFDSLSPKSKKRFQ 234

Query: 264 LYACNIELCN-ACDELLDPIEQRH-----RFEKEMQEKKKIYNETYPIDEDFLACLTEMP 317
                +E          D +          FE    +           D   +A L    
Sbjct: 235 TVLNGLEAMKVNFKTCHDLVRGLDYYTHTVFEITFNKMVLGGG--GCYD-HLVAALGGNQ 291

Query: 318 QSS-GIAMGFDRLVMLVTGANN 338
            S  G A+G +RL ML    NN
Sbjct: 292 LSGIGFALGMERL-MLTLQENN 312


>gi|149248656|ref|XP_001528715.1| phenylalanyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146448669|gb|EDK43057.1| phenylalanyl-tRNA synthetase, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 447

 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DR+ ML+ G  +I 
Sbjct: 311 FGIGLDRIAMLLFGIPDIR 329


>gi|269866893|ref|XP_002652425.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
 gi|220062530|gb|EED41631.1| aspartate-ammonia ligase [Enterocytozoon bieneusi H348]
          Length = 280

 Score = 36.9 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 263 ELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEM-PQSSG 321
           E+  C +E+ +    + D    R + E + + ++  Y     +       L  + P + G
Sbjct: 196 EVIGCGMEVSSMGIRV-DHTSLRRQLEAKNESRRAEYEFHRGV-------LEGVIPPTIG 247

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +G  R+VM + GA  I E+
Sbjct: 248 GGIGKSRVVMFLLGARPIGEI 268


>gi|182414172|ref|YP_001819238.1| phenylalanyl-tRNA synthetase, alpha subunit [Opitutus terrae
           PB90-1]
 gi|177841386|gb|ACB75638.1| phenylalanyl-tRNA synthetase, alpha subunit [Opitutus terrae
           PB90-1]
          Length = 347

 Score = 36.9 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             MG +RL ML+ G ++I 
Sbjct: 315 FGMGLERLAMLLYGIDDIR 333


>gi|159041187|ref|YP_001540439.1| phenylalanyl-tRNA synthetase, alpha subunit [Caldivirga
           maquilingensis IC-167]
 gi|157920022|gb|ABW01449.1| phenylalanyl-tRNA synthetase, alpha subunit [Caldivirga
           maquilingensis IC-167]
          Length = 498

 Score = 36.9 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DRL M+V G ++I 
Sbjct: 460 WGVGIDRLAMVVLGVDDIR 478


>gi|227872156|ref|ZP_03990526.1| serine--tRNA ligase [Oribacterium sinus F0268]
 gi|227842014|gb|EEJ52274.1| serine--tRNA ligase [Oribacterium sinus F0268]
          Length = 440

 Score = 36.9 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/99 (10%), Positives = 32/99 (32%), Gaps = 7/99 (7%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQ 79
                 + + S  R++ ++  F  +    +  S   +  +     + ++     + LYL 
Sbjct: 173 DVARLHSAVLSYARDFMIDRGFTYVIPPYMIRSKVVDGVMSFAEMDAMMYKIEGEDLYLI 232

Query: 80  TSPEFSC-KKLLAAGEE------KIFCFAHAWRNGEQGC 111
            + E S   + +            +  ++  +R  +   
Sbjct: 233 GTSEHSMIGRFIDQILPVESLPLTLTSYSPCFRKEKGSH 271


>gi|260942407|ref|XP_002615502.1| hypothetical protein CLUG_04384 [Clavispora lusitaniae ATCC 42720]
 gi|238850792|gb|EEQ40256.1| hypothetical protein CLUG_04384 [Clavispora lusitaniae ATCC 42720]
          Length = 488

 Score = 36.9 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DR+ ML+ G  +I 
Sbjct: 352 FGIGLDRIAMLLFGIPDIR 370


>gi|14591389|ref|NP_143467.1| glycyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|11387128|sp|O59235|SYG_PYRHO RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
          ligase; Short=GlyRS
 gi|3258043|dbj|BAA30726.1| 570aa long hypothetical glycyl-tRNA synthetase [Pyrococcus
          horikoshii OT3]
          Length = 570

 Score = 36.9 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 23 LKRNMIQSSLREYFVENQFIEIDSMSLQY 51
          +KR  I+  +RE F+   F EI++  +  
Sbjct: 44 IKR-KIERKIREAFIREGFFEIETPDITP 71


>gi|70950809|ref|XP_744696.1| phenylalanine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56524756|emb|CAH76871.1| phenylalanine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 442

 Score = 36.9 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G +RL ML+ G N+I 
Sbjct: 308 FGIGLERLAMLLYGINDIR 326


>gi|68070951|ref|XP_677389.1| phenylalanine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56497488|emb|CAH97893.1| phenylalanine--tRNA ligase, putative [Plasmodium berghei]
          Length = 446

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G +RL ML+ G N+I 
Sbjct: 312 FGIGLERLAMLLYGINDIR 330


>gi|332157838|ref|YP_004423117.1| glycyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331033301|gb|AEC51113.1| glycyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 571

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 23 LKRNMIQSSLREYFVENQFIEIDSMSLQY 51
          +KR  I+  +RE F+   F EI++  +  
Sbjct: 44 IKR-KIERKIREAFIREGFFEIETPDITP 71


>gi|313665277|ref|YP_004047148.1| phenylalanine--tRNA ligase, alpha subunit [Mycoplasma leachii PG50]
 gi|312949517|gb|ADR24113.1| phenylalanine--tRNA ligase, alpha subunit [Mycoplasma leachii PG50]
          Length = 350

 Score = 36.9 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 2/24 (8%)

Query: 319 SSG--IAMGFDRLVMLVTGANNIN 340
            SG    +G +R+ ML    +NI 
Sbjct: 309 CSGLAFGIGIERIAMLKFNISNIR 332


>gi|167755149|ref|ZP_02427276.1| hypothetical protein CLORAM_00654 [Clostridium ramosum DSM 1402]
 gi|167705199|gb|EDS19778.1| hypothetical protein CLORAM_00654 [Clostridium ramosum DSM 1402]
          Length = 426

 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 12/33 (36%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
                 + I S  R++ ++  F  +    +  S
Sbjct: 173 DIARLHSAILSYARDFMIDRGFTYVIPPYMIRS 205


>gi|218883548|ref|YP_002427930.1| phenylalanyl-tRNA synthetase subunit alpha [Desulfurococcus
           kamchatkensis 1221n]
 gi|218765164|gb|ACL10563.1| pheS; phenylalanyl-tRNA synthetase subunit alpha [Desulfurococcus
           kamchatkensis 1221n]
          Length = 520

 Score = 36.9 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 2/24 (8%)

Query: 322 IAMGFDRLVMLVTGANNINEVIWT 345
             +G DRL M V G N+I   +  
Sbjct: 465 WGIGVDRLAMTVLGLNDIR--LLF 486


>gi|50955299|ref|YP_062587.1| histidyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81826617|sp|Q6ADR4|SYH_LEIXX RecName: Full=Histidyl-tRNA synthetase; AltName:
           Full=Histidine--tRNA ligase; Short=HisRS
 gi|50951781|gb|AAT89482.1| histidyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 431

 Score = 36.6 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 37/133 (27%), Gaps = 29/133 (21%)

Query: 19  RPFL----LKRNMIQSSLREYFVENQFIEIDSMS------LQYSPGNE------------ 56
           R FL     +R      +R  F  + F EI++        L    G +            
Sbjct: 12  RDFLPAEKARREHALGVIRRSFSAHGFDEIETPVAEDVARLHAGLGGDNEKLAFSVLKRG 71

Query: 57  -------THIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQ 109
                    I +  T  +    +R  L +  +  F+  +   +   +    A  WR    
Sbjct: 72  LSGDDLRAAIESGDTLSLCDLGLRFDLTVPLARFFASHRAELSPVFRSLQIAPVWRAERP 131

Query: 110 GCLHQPEFTMLEW 122
                 +F   + 
Sbjct: 132 QKGRYRQFVQCDI 144


>gi|84999700|ref|XP_954571.1| histidyl-trna synthetase [Theileria annulata]
 gi|65305569|emb|CAI73894.1| histidyl-trna synthetase, putative [Theileria annulata]
          Length = 583

 Score = 36.6 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 95/335 (28%), Gaps = 52/335 (15%)

Query: 23  LKRNMIQSSLREYFVENQFIEIDSMS--LQYSPGNETHIRAFSTELIIQDHIRKPLYLQT 80
           L R ++ SS+++ F ++  +EI++    L+ +     +         ++D   + L L+ 
Sbjct: 140 LTRRVVISSIKDIFRQHGAVEIETPVFELKETLLG-KYGEDQKLIFDLKDQGGEQLSLRY 198

Query: 81  SPEFSCKKLLAAGEEKIFC---FAHAWRNG--EQGCLHQPEFTMLEWYRAHESYEQLMKD 135
                  + +A  + +          +R    +       EF   +   A E  + +   
Sbjct: 199 DLTVPFARFVAMNKMEKIKRFHIGKVYRRDEPQLARGRYREFYQCDLDCAGEYPKMVPDS 258

Query: 136 CMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRH 195
            +  I        +  F+ +  +        +    E           T   + D+ D+ 
Sbjct: 259 EVIFILVRVLRLLKGSFAVRINHRAILDAVLFHCGVEVSM------HRTICSSIDKLDKV 312

Query: 196 LLYLQAQQAGIRVAHDDTWSDIFSRILIE--KIEPNLGINCCTILDRYPAPESALANIYP 253
                  +        +  +D     +      E  LG      +               
Sbjct: 313 PWDKVKLEMTSEKGLPEYIADKIKEFIEINGNFEEVLGKLRDKNI--------KTLTKDD 364

Query: 254 ADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFL--- 310
           +D       EL         +  E     E    F  +M   + +   T  I E FL   
Sbjct: 365 SDSNVLDDMELLW-------SYLESFGVKESEVMF--DMSLARGLDYYTGVIFEAFLKDE 415

Query: 311 -----------ACLTEM-----PQSSGIAMGFDRL 329
                        L  M       S G+++G +RL
Sbjct: 416 DIGSVGAGGRYDGLIGMFSGKNVPSVGMSVGIERL 450


>gi|84995656|ref|XP_952550.1| phenylalanine-trna synthetase [Theileria annulata strain Ankara]
 gi|65302711|emb|CAI74818.1| phenylalanine-trna synthetase, putative [Theileria annulata]
          Length = 520

 Score = 36.6 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 6/24 (25%), Positives = 13/24 (54%), Gaps = 2/24 (8%)

Query: 320 SGI--AMGFDRLVMLVTGANNINE 341
            G    +G +RL M++   ++I +
Sbjct: 378 GGWAFGIGLERLTMVLCKISDIRQ 401


>gi|319643422|ref|ZP_07998047.1| phenylalanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|317384956|gb|EFV65910.1| phenylalanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 354

 Score = 36.6 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 6/19 (31%), Positives = 9/19 (47%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DRL+M      +I 
Sbjct: 215 FGLGIDRLLMSYCDIPDIR 233


>gi|260913490|ref|ZP_05919968.1| aspartate-ammonia ligase [Pasteurella dagmatis ATCC 43325]
 gi|260632430|gb|EEX50603.1| aspartate-ammonia ligase [Pasteurella dagmatis ATCC 43325]
          Length = 330

 Score = 36.6 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 44/336 (13%), Positives = 83/336 (24%), Gaps = 42/336 (12%)

Query: 22  LLKRNMIQSSLREYFVEN-----QFIEIDSMSLQYSP-------GNETHIRAFSTELIIQ 69
            + +    S  +  F +        +E+    L                    + + I  
Sbjct: 5   FILQQQEISFAKNTFTDKLADHLGIVEVQGPILSQVGNGIQDNLSGAEKAVQVNVKQITD 64

Query: 70  DHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESY 129
                   L      +  +   A  E +F    A R  E              Y     +
Sbjct: 65  ATFEVVHSLAKWKRHTLARFGFAENEGLFVHMKALRPDEDSLDQTHS-----VYVDQWDW 119

Query: 130 EQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNP 189
           E+++      +    E  N    +          +        +   + + +       P
Sbjct: 120 EKVIPKGRRNLAYLKETVNSIYQAILETEEAVSKKFGLERFLPSQITFLHSEELVQRY-P 178

Query: 190 DQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALA 249
              D+       ++ G          ++      +   P+           Y      + 
Sbjct: 179 GMNDKERENAICKEYGAVFLIGIG-GELSDGKPHDMRAPDYDDWTTPSEGEYKGLNGDIL 237

Query: 250 NIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDE-- 307
              P   R    FEL +  I +        D    R     ++        E    D   
Sbjct: 238 VWNPILER---AFELSSMGIRV--------DETALR----TQLALTD--DEERLKFDWHQ 280

Query: 308 DFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
           D +      +P S G  +G  RLVML+    +I EV
Sbjct: 281 DLIN---GRLPLSIGGGIGQSRLVMLLLQKKHIGEV 313


>gi|237732621|ref|ZP_04563102.1| seryl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229384300|gb|EEO34391.1| seryl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 309

 Score = 36.6 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 12/33 (36%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
                 + I S  R++ ++  F  +    +  S
Sbjct: 194 DIARLHSAILSYARDFMIDRGFTYVIPPYMIRS 226


>gi|325970996|ref|YP_004247187.1| aspartate--ammonia ligase [Spirochaeta sp. Buddy]
 gi|324026234|gb|ADY12993.1| Aspartate--ammonia ligase [Spirochaeta sp. Buddy]
          Length = 344

 Score = 36.6 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 4/59 (6%)

Query: 285 RHRFEKEMQEKKKIYNETYPIDEDFLACLTE-MPQSSGIAMGFDRLVMLVTGANNINEV 342
           R    +++Q +           +  LA     +PQ+ G  +G  RL M +    +I EV
Sbjct: 268 RETLLRQLQIRNAQDRANLYWHKRLLA---GELPQTVGGGIGQSRLCMYLLKKAHIGEV 323


>gi|327310710|ref|YP_004337607.1| phenylalanyl-tRNA synthetase subunit alpha [Thermoproteus
           uzoniensis 768-20]
 gi|326947189|gb|AEA12295.1| phenylalanyl-tRNA synthetase subunit alpha [Thermoproteus
           uzoniensis 768-20]
          Length = 492

 Score = 36.6 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 6/20 (30%), Positives = 11/20 (55%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
              G DR+ M++ G  +I +
Sbjct: 441 WGWGLDRVAMILLGIEDIRD 460


>gi|330832315|ref|YP_004401140.1| asparagine synthetase AsnA [Streptococcus suis ST3]
 gi|329306538|gb|AEB80954.1| asparagine synthetase AsnA [Streptococcus suis ST3]
          Length = 330

 Score = 36.6 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 37/322 (11%), Positives = 79/322 (24%), Gaps = 42/322 (13%)

Query: 34  EYF-VENQFIEIDSMSLQYSP-------GNETHIRAFSTELIIQDHIRKPLYLQTSPEFS 85
           +Y   + + +E+    L               +    + +LI          L      +
Sbjct: 21  QYLKDKLEIVEVQGPILSCVGDGMQDNLSGVENAVTVNVKLIPDATYEVVHSLAKWKRHT 80

Query: 86  CKKLLAAGEEKIFCFAHAWRNGE--QGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
             +      E +F    A R  E     +H       +W +      + +      +   
Sbjct: 81  LARFGFNEGEGLFVHMKALRPDEDSLDPIHSVYVDQWDWEKVIPDGRRNLAYLKETVEQI 140

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
            +       + +         P+ IT         N    T  +  +   +    +    
Sbjct: 141 YKAIRLTELAVEARYDIESVLPKKITFIHTEDLVKNFPDLTPKERENVVTKEYGAVFLIG 200

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G  +A                  P+ G          P+                   +
Sbjct: 201 IGGELADGK---------------PHDGRAPDYDDWTSPSEAGYKGL----------NGD 235

Query: 264 LYACNIELCNACD-ELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACL-TEMPQSS- 320
           +   N  L +A +   +         ++++        +    D      L   +   S 
Sbjct: 236 ILVWNEALGSAFELSSMGIRVDEEALKRQVAI--TGDEDRLEFDWH--RALLNGLFPLSI 291

Query: 321 GIAMGFDRLVMLVTGANNINEV 342
           G  +G  RL M +    +I EV
Sbjct: 292 GGGIGQSRLAMFLLRKKHIGEV 313


>gi|28377779|ref|NP_784671.1| asparagine synthetase AsnA [Lactobacillus plantarum WCFS1]
 gi|47115778|sp|Q88Y39|ASNA_LACPL RecName: Full=Aspartate--ammonia ligase; AltName: Full=Asparagine
           synthetase A
 gi|28270612|emb|CAD63518.1| aspartate--ammonia ligase [Lactobacillus plantarum WCFS1]
          Length = 322

 Score = 36.6 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 66/259 (25%), Gaps = 35/259 (13%)

Query: 85  SCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
           + K+      E ++   +A R + +    H         Y     +E+++      +   
Sbjct: 90  ALKRYGFDMHEGLYTNMNAIRKDEDLDNYHS-------AYVDQWDWEKVISKEERTVETL 142

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
                Q     +++    + +            +           PD   R       ++
Sbjct: 143 KAAVRQIFKVIKHMEHEVWYKFPQAVHHLPDEIHFLTTQELEDMYPDMTPRERENAICKK 202

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G        W        ++  E + G        +                  +    
Sbjct: 203 LGCVFLMQIGW-------KLDSGERHDGRAPDYDDWKLNGDILFWYEPLDQAIEISSMG- 254

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIA 323
                                    +K++++       + P  +  L     +P + G  
Sbjct: 255 -----------------IRVDAESMKKQLKDVDAEDRLSLPYHQMILNAD--VPYTIGGG 295

Query: 324 MGFDRLVMLVTGANNINEV 342
           +G  RL ML+ G  ++ EV
Sbjct: 296 IGQSRLCMLLLGKAHVGEV 314


>gi|254518565|ref|ZP_05130621.1| histidyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226912314|gb|EEH97515.1| histidyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 415

 Score = 36.6 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 73/306 (23%), Gaps = 42/306 (13%)

Query: 40  QFIEIDSMSLQYS-----PGNETHIRAFSTELIIQDHIRKPLYLQT---SPE----FSCK 87
              EI +   +++        ET            D   + + L+    +P        +
Sbjct: 35  GVREIRTPMFEHTELFLRGVGETTDIVQKEMYTFNDKGDRSITLKPEGTAPTVRAFIENR 94

Query: 88  KLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVA 147
               A   K++     +R          +F              +  + +++   + +  
Sbjct: 95  LFNEAQPTKLYYIIPCFRYENVQKGRLRQFHQYGVEVFGSKEASIDAEVISLAMESLKKL 154

Query: 148 NQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIR 207
             K  S    N             EA  +Y   +                          
Sbjct: 155 GLKSLSLNINNL--GCPKCRPKYNEALKKYLEENYDNLCGICKTRFEKNPMRILDCKEKS 212

Query: 208 VAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYAC 267
                  + I    + E+ + +                 AL   Y  DP   +  + Y  
Sbjct: 213 CNEITKHAPIILDYICEECDSHFTEVKNY--------LDALKIQYKVDPGIVRGLDYYTK 264

Query: 268 NIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFD 327
            I      D  +    +  +  +E+        E                 + G  +G +
Sbjct: 265 TIFEILNDDFTVCGGGRYDKLIEEI-----GGPEM---------------PAVGFGLGLE 304

Query: 328 RLVMLV 333
           RL+M +
Sbjct: 305 RLIMTL 310


>gi|325479678|gb|EGC82770.1| aspartate--ammonia ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 336

 Score = 36.6 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 12/62 (19%)

Query: 286 HRFEKEMQE-----KKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANNIN 340
            R  +++++     + K       ID         +PQ+ G  +G  RL M      +I 
Sbjct: 261 ERLNEQLKQTDNLDRLKFDYHKMLIDGR-------LPQTVGGGIGQSRLCMFFLQKAHIG 313

Query: 341 EV 342
           EV
Sbjct: 314 EV 315


>gi|117164460|emb|CAJ88006.1| putative phenylalanyl-tRNA synthetase alpha chain [Streptomyces
           ambofaciens ATCC 23877]
          Length = 373

 Score = 36.6 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
           + MG DR++ML+ G  +I 
Sbjct: 223 LGMGLDRMLMLLKGIPDIR 241


>gi|294506836|ref|YP_003570894.1| Histidyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343164|emb|CBH23942.1| Histidyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 437

 Score = 36.6 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 42/138 (30%), Gaps = 18/138 (13%)

Query: 25  RNMIQSSLREYFVENQFIEIDSMSLQYS-----PGNETHIRAFSTELIIQDHIRKPLYLQ 79
           R+ +++++R+    + F EI +  L+ +        E+       E+   +       L+
Sbjct: 36  RH-VEATVRDVMRRHNFEEIRTPVLEPTELVARGVGEST-DIVQKEMFAFERSDTQYVLR 93

Query: 80  TSPEF-------SCKKLLAAGEE--KIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
             PE          +  L       K+F     +R  +       +F             
Sbjct: 94  --PEITAPVVRSFLQHHLDQRGGVQKLFYIGPCFRAEQPQKGRYRQFHQFGIEVLGADQP 151

Query: 131 QLMKDCMNIIRCAAEVAN 148
           +   + + ++    E   
Sbjct: 152 RADAETIAVLMAVCEALG 169


>gi|19075274|ref|NP_587774.1| mitochondrial phenylalanyl-tRNA synthetase [Schizosaccharomyces
           pombe 972h-]
 gi|74626932|sp|O74952|SYFM_SCHPO RecName: Full=Phenylalanyl-tRNA synthetase, mitochondrial; AltName:
           Full=Phenylalanine--tRNA ligase; Flags: Precursor
 gi|3169073|emb|CAA19267.1| mitochondrial phenylalanyl-tRNA synthetase [Schizosaccharomyces
           pombe]
          Length = 429

 Score = 36.6 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 6/19 (31%), Positives = 11/19 (57%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G +RL M++ G  +I 
Sbjct: 296 FGIGLERLAMILYGIPDIR 314


>gi|194467292|ref|ZP_03073279.1| histidyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194454328|gb|EDX43225.1| histidyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 425

 Score = 36.6 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 36/341 (10%), Positives = 73/341 (21%), Gaps = 68/341 (19%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPG----------------------NETH--IRAF 62
            ++ + RE F +  +  I +   +                           + H  +R  
Sbjct: 22  KVEQNAREVFNQFGYRGIRTPMFEDYHVFSRNVGDTSDIVEKEMYDFHDKGDRHIALRPE 81

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML-- 120
            T  +++ ++   LY    P+             ++     +R        Q EF  +  
Sbjct: 82  GTAGVVRAYVENKLYGPEYPKPYK----------VYYMGPMFRYERPQSGRQREFHQIGV 131

Query: 121 ---EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
                       E +        +         I +  +           I   +     
Sbjct: 132 EALNNESPQIDVEVISMAMALFKKFGVPNVKLVINTLGDKKVREDYREALINYLKPHYDE 191

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
            + D    L               ++          + D  S+   ++++  L       
Sbjct: 192 LSKDSQERLYKNPLRVLDSKDEGDKKIVAEAPSILDYLDEESQAYFDEVQALLNKLGIDF 251

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
                     L               ++        A       I Q             
Sbjct: 252 EIDTNM-VRGLDYYNHTIFEIMSDSPVFGGGYTTVCAGGRYNGLISQL------------ 298

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANN 338
              E   I               G  MG +RL ML+    N
Sbjct: 299 GGPEEGGI---------------GFGMGVERL-MLLLQEEN 323


>gi|148545053|ref|YP_001272423.1| histidyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184154386|ref|YP_001842727.1| histidyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227364203|ref|ZP_03848299.1| histidyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325683406|ref|ZP_08162922.1| histidine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148532087|gb|ABQ84086.1| histidyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183225730|dbj|BAG26247.1| histidyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227070748|gb|EEI09075.1| histidyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324977756|gb|EGC14707.1| histidine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 425

 Score = 36.6 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 36/341 (10%), Positives = 73/341 (21%), Gaps = 68/341 (19%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPG----------------------NETH--IRAF 62
            ++ + RE F +  +  I +   +                           + H  +R  
Sbjct: 22  KVEQNAREVFNQFGYRGIRTPMFEDYHVFSRNVGDTSDIVEKEMYDFHDKGDRHIALRPE 81

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML-- 120
            T  +++ ++   LY    P+             ++     +R        Q EF  +  
Sbjct: 82  GTAGVVRAYVENKLYGPEYPKPYK----------VYYMGPMFRYERPQSGRQREFHQIGV 131

Query: 121 ---EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
                       E +        +         I +  +           I   +     
Sbjct: 132 EALNNESPQIDVEVISMAMALFKKFGVPNVKLVINTLGDKKVREDYREALINYLKPHYDE 191

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
            + D    L               ++          + D  S+   ++++  L       
Sbjct: 192 LSKDSQERLYKNPLRVLDSKDEGDKKIVAEAPSILDYLDEESQAYFDEVQALLNKLGIDF 251

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
                     L               ++        A       I Q             
Sbjct: 252 EIDTNM-VRGLDYYNHTIFEIMSDSPVFGGGYTTVCAGGRYNGLISQL------------ 298

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANN 338
              E   I               G  MG +RL ML+    N
Sbjct: 299 GGPEEGGI---------------GFGMGVERL-MLLLQEEN 323


>gi|55379555|ref|YP_137405.1| phenylalanyl-tRNA synthetase subunit alpha [Haloarcula marismortui
           ATCC 43049]
 gi|55232280|gb|AAV47699.1| phenylalanyl-tRNA synthetase alpha chain [Haloarcula marismortui
           ATCC 43049]
          Length = 503

 Score = 36.6 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +  +RL+ML+ G  +I +V
Sbjct: 466 WGLSLERLLMLMYGFEDIRDV 486


>gi|172058096|ref|YP_001814556.1| histidyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990617|gb|ACB61539.1| histidyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 426

 Score = 36.6 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 7/26 (26%), Positives = 13/26 (50%), Gaps = 3/26 (11%)

Query: 321 GIAMGFDRLVMLVTG---ANNINEVI 343
           G  +G +RL+M +        I++ I
Sbjct: 303 GFGIGIERLLMALENEGVLPEIDDAI 328


>gi|293400049|ref|ZP_06644195.1| serine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306449|gb|EFE47692.1| serine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 428

 Score = 36.6 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 12/33 (36%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
                 + + S  R++ +E  F  +    +  S
Sbjct: 173 DIARLHSAVISYARDFMIERGFTYVVPPFMIRS 205


>gi|255526052|ref|ZP_05392975.1| phenylalanyl-tRNA synthetase, alpha subunit [Clostridium
           carboxidivorans P7]
 gi|296187099|ref|ZP_06855497.1| phenylalanyl-tRNA synthetase, alpha subunit [Clostridium
           carboxidivorans P7]
 gi|255510238|gb|EET86555.1| phenylalanyl-tRNA synthetase, alpha subunit [Clostridium
           carboxidivorans P7]
 gi|296048293|gb|EFG87729.1| phenylalanyl-tRNA synthetase, alpha subunit [Clostridium
           carboxidivorans P7]
          Length = 339

 Score = 36.6 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
              G DR+VML  G ++I +
Sbjct: 308 FGFGVDRMVMLKYGLDDIRQ 327


>gi|261408044|ref|YP_003244285.1| peptidase S16 lon domain-containing protein [Paenibacillus sp.
           Y412MC10]
 gi|261284507|gb|ACX66478.1| peptidase S16 lon domain protein [Paenibacillus sp. Y412MC10]
          Length = 346

 Score = 36.6 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 26/227 (11%), Positives = 56/227 (24%), Gaps = 10/227 (4%)

Query: 46  SMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
           +  L Y PG+   +R                 + T         L              +
Sbjct: 31  TPYLVYQPGSAEEVRPMINVEKGDPAEEGTFMMTTVSASYANMALLMLSAFNPNAEVVKK 90

Query: 106 NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
             + G   + E+   + Y  + +  Q             + + +  + F        +  
Sbjct: 91  AEKMGDQSKDEYAATQVY--YMNSSQSSAMEAAYQEAGIDYSIEPAYVFVMSISENSANA 148

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E+    +   +   ID     DN             ++  + +           +++  K
Sbjct: 149 EHFRPGDKLIK---IDGQPAEDNEKIASLLSGKSIGEEVSVELERKGKTVKEQVKLVSIK 205

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELC 272
            E          +       + + N+ PADP  T  F          
Sbjct: 206 DEKTGAERPGLGVM-----IATMQNVAPADPDHTIHFADTNIGGPSA 247


>gi|14520768|ref|NP_126243.1| glycyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|11387156|sp|Q9V176|SYG_PYRAB RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
          ligase; Short=GlyRS
 gi|5457984|emb|CAB49474.1| glyS glycyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 571

 Score = 36.6 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 23 LKRNMIQSSLREYFVENQFIEIDSMSLQY 51
          +KR  I+  +RE F+   F EI++  +  
Sbjct: 44 IKR-KIEKKIREAFIREGFFEIETPDITP 71


>gi|309807573|ref|ZP_07701525.1| hypothetical protein HMPREF9211_1367 [Lactobacillus iners LactinV
           01V1-a]
 gi|308169179|gb|EFO71245.1| hypothetical protein HMPREF9211_1367 [Lactobacillus iners LactinV
           01V1-a]
          Length = 73

 Score = 36.6 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 331 MLVTGANNINEVIWTP 346
           ML+    NI +VI  P
Sbjct: 1   MLLAEKYNIRDVIAFP 16


>gi|227543636|ref|ZP_03973685.1| histidyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300908692|ref|ZP_07126155.1| histidine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227186380|gb|EEI66451.1| histidyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300894099|gb|EFK87457.1| histidine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 425

 Score = 36.2 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 36/341 (10%), Positives = 73/341 (21%), Gaps = 68/341 (19%)

Query: 27  MIQSSLREYFVENQFIEIDSMSLQYSPG----------------------NETH--IRAF 62
            ++ + RE F +  +  I +   +                           + H  +R  
Sbjct: 22  KVEQNAREVFNQFGYRGIRTPMFEDYHVFSRNVGDTSDIVEKEMYDFHDKGDRHIALRPE 81

Query: 63  STELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTML-- 120
            T  +++ ++   LY    P+             ++     +R        Q EF  +  
Sbjct: 82  GTAGVVRAYVENKLYGPEYPKPYK----------VYYMGPMFRYERPQSGRQREFHQIGV 131

Query: 121 ---EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARY 177
                       E +        +         I +  +           I   +     
Sbjct: 132 EALNNESPQIDVEVISMAMALFKKFGVPNVKLVINTLGDKKVREDYREALINYLKPHYDE 191

Query: 178 ANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTI 237
            + D    L               ++          + D  S+   ++++  L       
Sbjct: 192 LSKDSQERLYKNPLRVLDSKDEGDKKIVAEAPSILDYLDEESQAYFDEVQALLNKLGIDF 251

Query: 238 LDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHRFEKEMQEKKK 297
                     L               ++        A       I Q             
Sbjct: 252 EIDTNM-VRGLDYYNHTIFEIMSDSPVFGGGYTTVCAGGRYNGLISQL------------ 298

Query: 298 IYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANN 338
              E   I               G  MG +RL ML+    N
Sbjct: 299 GGPEEGGI---------------GFGMGVERL-MLLLQEEN 323


>gi|312870368|ref|ZP_07730493.1| histidine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094069|gb|EFQ52388.1| histidine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 425

 Score = 36.2 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 33/291 (11%), Positives = 62/291 (21%), Gaps = 46/291 (15%)

Query: 55  NETH--IRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCL 112
            + H  +R   T  +++ ++   LY    P+             ++     +R       
Sbjct: 72  GDRHIALRPEGTAGVVRAYVENKLYGPEYPKPYK----------VYYMGPMFRYERPQSG 121

Query: 113 HQPEFTML-----EWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEY 167
            Q EF  +              E +        +         I +  +           
Sbjct: 122 RQREFHQIGVEALNNESPQIDVEVIAMAMALFKKFGVPNVKLVINTLGDKQVRQDYREAL 181

Query: 168 ITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIE 227
           I   +      + D    L               Q+          + D  S+   ++++
Sbjct: 182 INYLKPHYDELSADSQERLYKNPLRVLDSKDEGDQKLVADAPSILDYLDDESQSYFDQVQ 241

Query: 228 PNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPIEQRHR 287
             L                 L               ++        A       I Q   
Sbjct: 242 KLLKELGIDYEIDTNM-VRGLDYYNHTIFEIMSDSPVFGGGYTTVCAGGRYNGLISQL-- 298

Query: 288 FEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIAMGFDRLVMLVTGANN 338
                        E   I               G  MG +RL ML+    N
Sbjct: 299 ----------GGPEEGGI---------------GFGMGVERL-MLLLQQEN 323


>gi|291227057|ref|XP_002733504.1| PREDICTED: GTP-binding mitogen-induced T-cell protein-like
           [Saccoglossus kowalevskii]
          Length = 1264

 Score = 36.2 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 24/222 (10%), Positives = 56/222 (25%), Gaps = 16/222 (7%)

Query: 64  TELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWY 123
           T     +  R+      S +   K++              WR  +             +Y
Sbjct: 372 TWSFQTNSFRQNEREYGSSQRWYKQMGKHDRNW-------WRRRKHDEKTNTAMQSQNYY 424

Query: 124 RAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLG 183
           R      +  K   +  R      +    +   +     S  + +  ++     ++ D  
Sbjct: 425 RKMYDERRDQKTKYHDQRLHNTRWSSSP-TMPRLEKQTVSPFQGVHTSQ-----SSTDKS 478

Query: 184 TTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRY-- 241
           T   N  +   +  + + +         D         +    E +          ++  
Sbjct: 479 TKWLNDQKYKDNENFEKTRFLDFLNQDPDNCQYGNKEHISAYNESHYETGNVHCSSQWRI 538

Query: 242 -PAPESALANIYPADPRFTKRFELYACNIELCNACDELLDPI 282
            P   +         P+ TK  ELY+ +     +  E     
Sbjct: 539 SPVEINDYDLSKVTLPKLTKITELYSGHKFSGGSGLENDCTW 580


>gi|83815951|ref|YP_444974.1| histidyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83757345|gb|ABC45458.1| histidyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 435

 Score = 36.2 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 42/138 (30%), Gaps = 18/138 (13%)

Query: 25  RNMIQSSLREYFVENQFIEIDSMSLQYS-----PGNETHIRAFSTELIIQDHIRKPLYLQ 79
           R+ +++++R+    + F EI +  L+ +        E+       E+   +       L+
Sbjct: 34  RH-VEATVRDVMRRHNFEEIRTPVLEPTELVARGVGEST-DIVQKEMFAFERSDTQYVLR 91

Query: 80  TSPEF-------SCKKLLAAGEE--KIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYE 130
             PE          +  L       K+F     +R  +       +F             
Sbjct: 92  --PEITAPVVRSFLQHHLDQRGGVQKLFYIGPCFRAEQPQKGRYRQFHQFGIEVLGADQP 149

Query: 131 QLMKDCMNIIRCAAEVAN 148
           +   + + ++    E   
Sbjct: 150 RADAETIAVLMAVCEALG 167


>gi|301167140|emb|CBW26719.1| phenylalanyl-tRNA synthetase alpha chain [Bacteriovorax marinus SJ]
          Length = 354

 Score = 36.2 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DRLVM+  G ++I 
Sbjct: 320 FGLGLDRLVMMKYGIDDIR 338


>gi|18977999|ref|NP_579356.1| glycyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|32171572|sp|Q8U0G2|SYG_PYRFU RecName: Full=Glycyl-tRNA synthetase; AltName: Full=Glycine--tRNA
          ligase; Short=GlyRS
 gi|18893778|gb|AAL81751.1| glycyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 568

 Score = 36.2 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 23 LKRNMIQSSLREYFVENQFIEIDSMSLQY 51
          +KR  I+  +RE F+   F EI++  +  
Sbjct: 42 IKR-KIEKKIREAFIREGFFEIETPDITP 69


>gi|169351626|ref|ZP_02868564.1| hypothetical protein CLOSPI_02407 [Clostridium spiroforme DSM 1552]
 gi|169291848|gb|EDS73981.1| hypothetical protein CLOSPI_02407 [Clostridium spiroforme DSM 1552]
          Length = 427

 Score = 36.2 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 12/33 (36%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
                 + I S  R++ ++  F  +    +  S
Sbjct: 173 DVARLHSAILSYARDFMIDRGFTYVIPPYMIRS 205


>gi|297807987|ref|XP_002871877.1| esterase/lipase/thioesterase family protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317714|gb|EFH48136.1| esterase/lipase/thioesterase family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 326

 Score = 36.2 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 4/75 (5%)

Query: 18  RRPFLLKRNMIQSS-LR--EYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRK 74
           RR     R       +R  +   E  F E++   L    G +        E + +  I +
Sbjct: 222 RRTVARPRAATAYELIRVCKDLQER-FEEVEVPLLIVHGGGDVICDVACVEELHRRAISE 280

Query: 75  PLYLQTSPEFSCKKL 89
              ++  PE   + +
Sbjct: 281 DKTIKIYPELWHQMI 295


>gi|329930001|ref|ZP_08283640.1| Lon protease (S16) C-terminal proteolytic domain protein
           [Paenibacillus sp. HGF5]
 gi|328935523|gb|EGG31993.1| Lon protease (S16) C-terminal proteolytic domain protein
           [Paenibacillus sp. HGF5]
          Length = 359

 Score = 36.2 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 56/218 (25%), Gaps = 10/218 (4%)

Query: 46  SMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPEFSCKKLLAAGEEKIFCFAHAWR 105
           +  L Y PG+   +R                 + T         L              +
Sbjct: 44  TPYLVYQPGSAEEVRPMINVEKGDPAEEGTFMMTTVSASYANMALLMLSAFNPNAEVVKK 103

Query: 106 NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEVANQKIFSFQNVNCNPFSEP 165
             + G   + E+   + Y  + +  Q             + + +  + F        +  
Sbjct: 104 AEKMGDQSKDEYAATQVY--YMNSSQSSAMEAAYQEAGIDYSIEPAYVFVMSISENSANA 161

Query: 166 EYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGIRVAHDDTWSDIFSRILIEK 225
           E+    +   +   ID     DN             ++  + +           +++  K
Sbjct: 162 EHFRPGDKLIK---IDGQPAEDNEKIASLLSGKSIGEEVSVELERKGKTVKEQVKLVSIK 218

Query: 226 IEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            E          +       + + N+ PADP  T  F 
Sbjct: 219 DEKTGAERPGLGVM-----IATMQNVEPADPDHTIHFA 251


>gi|291458613|ref|ZP_06598003.1| serine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291419146|gb|EFE92865.1| serine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 436

 Score = 36.2 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 5/33 (15%), Positives = 12/33 (36%)

Query: 20  PFLLKRNMIQSSLREYFVENQFIEIDSMSLQYS 52
                 + I S  R++ ++  F  +    +  S
Sbjct: 173 DIARLHSAILSYARDFMIDRGFTYVIPPYMIRS 205


>gi|303322539|ref|XP_003071261.1| phenylalanyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110963|gb|EER29116.1| phenylalanyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320033025|gb|EFW14975.1| phenylalanyl-tRNA synthetase alpha subunit [Coccidioides posadasii
           str. Silveira]
          Length = 505

 Score = 36.2 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 7/26 (26%), Positives = 13/26 (50%), Gaps = 2/26 (7%)

Query: 317 PQSSGI--AMGFDRLVMLVTGANNIN 340
           P+  G    +G +R+ ML+    +I 
Sbjct: 353 PEHIGWAFGLGLERIAMLLFNIPDIR 378


>gi|241950673|ref|XP_002418059.1| phenylalanyl-tRNA synthetase alpha subunit, mitochondrial
           precursor, putative [Candida dubliniensis CD36]
 gi|223641398|emb|CAX43358.1| phenylalanyl-tRNA synthetase alpha subunit, mitochondrial
           precursor, putative [Candida dubliniensis CD36]
          Length = 446

 Score = 36.2 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 6/19 (31%), Positives = 10/19 (52%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DR+ ML+    +I 
Sbjct: 312 FGIGLDRIAMLLFNIPDIR 330


>gi|254168225|ref|ZP_04875071.1| phenylalanyl-tRNA synthetase, alpha subunit, putative
           [Aciduliprofundum boonei T469]
 gi|197622734|gb|EDY35303.1| phenylalanyl-tRNA synthetase, alpha subunit, putative
           [Aciduliprofundum boonei T469]
          Length = 504

 Score = 36.2 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 7/20 (35%), Positives = 11/20 (55%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
             +G +RL M+  G  +I E
Sbjct: 469 WGLGLERLAMITLGLKDIRE 488


>gi|289595864|ref|YP_003482560.1| phenylalanyl-tRNA synthetase, alpha subunit [Aciduliprofundum
           boonei T469]
 gi|289533651|gb|ADD07998.1| phenylalanyl-tRNA synthetase, alpha subunit [Aciduliprofundum
           boonei T469]
          Length = 486

 Score = 36.2 bits (82), Expect = 8.3,   Method: Composition-based stats.
 Identities = 7/20 (35%), Positives = 11/20 (55%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
             +G +RL M+  G  +I E
Sbjct: 451 WGLGLERLAMITLGLKDIRE 470


>gi|76801000|ref|YP_326008.1| phenylalanyl-tRNA synthetase subunit alpha [Natronomonas pharaonis
           DSM 2160]
 gi|76556865|emb|CAI48439.1| phenylalanine--tRNA ligase alpha subunit [Natronomonas pharaonis
           DSM 2160]
          Length = 504

 Score = 36.2 bits (82), Expect = 8.3,   Method: Composition-based stats.
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +  +RL+ML+ G  +I +V
Sbjct: 467 WGLALERLLMLMYGFEDIRDV 487


>gi|322371495|ref|ZP_08046044.1| phenylalanyl-tRNA synthetase subunit alpha [Haladaptatus
           paucihalophilus DX253]
 gi|320549027|gb|EFW90692.1| phenylalanyl-tRNA synthetase subunit alpha [Haladaptatus
           paucihalophilus DX253]
          Length = 502

 Score = 36.2 bits (82), Expect = 8.3,   Method: Composition-based stats.
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +  +RL+ML+ G  +I +V
Sbjct: 465 WGLALERLLMLMYGFEDIRDV 485


>gi|254555961|ref|YP_003062378.1| asparagine synthetase AsnA [Lactobacillus plantarum JDM1]
 gi|254044888|gb|ACT61681.1| asparagine synthetase AsnA [Lactobacillus plantarum JDM1]
          Length = 335

 Score = 36.2 bits (82), Expect = 8.3,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 66/259 (25%), Gaps = 35/259 (13%)

Query: 85  SCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
           + K+      E ++   +A R + +    H         Y     +E+++      +   
Sbjct: 90  ALKRYGFDMHEGLYTNMNAIRKDEDLDNYHS-------AYVDQWDWEKVISKEERTVETL 142

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
                Q     +++    + +            +           PD   R       ++
Sbjct: 143 KATVRQIFKVIKHMEHEVWYKFPQAVHHLPDEIHFLTTQELEDMYPDMTPRERENAICKK 202

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G        W        ++  E + G        +                  +    
Sbjct: 203 LGCVFLMQIGW-------KLDSGERHDGRAPDYDDWKLNGDILFWYEPLDQAIEISSMG- 254

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIA 323
                                    +K++++       + P  +  L     +P + G  
Sbjct: 255 -----------------IRVDAESMKKQLKDVDAEDRLSLPYHQMILNAD--VPYTIGGG 295

Query: 324 MGFDRLVMLVTGANNINEV 342
           +G  RL ML+ G  ++ EV
Sbjct: 296 IGQSRLCMLLLGKAHVGEV 314


>gi|258565467|ref|XP_002583478.1| hypothetical protein UREG_06445 [Uncinocarpus reesii 1704]
 gi|237907179|gb|EEP81580.1| hypothetical protein UREG_06445 [Uncinocarpus reesii 1704]
          Length = 282

 Score = 36.2 bits (82), Expect = 8.3,   Method: Composition-based stats.
 Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 2/26 (7%)

Query: 317 PQSSGI--AMGFDRLVMLVTGANNIN 340
           P   G    +G +R+ ML+    +I 
Sbjct: 132 PDHIGWAFGLGLERIAMLLFNIPDIR 157


>gi|313125094|ref|YP_004035358.1| phenylalanyl-tRNA synthetase, alpha subunit [Halogeometricum
           borinquense DSM 11551]
 gi|312291459|gb|ADQ65919.1| phenylalanyl-tRNA synthetase, alpha subunit [Halogeometricum
           borinquense DSM 11551]
          Length = 503

 Score = 36.2 bits (82), Expect = 8.3,   Method: Composition-based stats.
 Identities = 7/21 (33%), Positives = 14/21 (66%)

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +  +RL+ML+ G ++I +V
Sbjct: 466 WGLALERLLMLMYGFDDIRDV 486


>gi|240103065|ref|YP_002959374.1| threonyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|259516771|sp|C5A5J8|SYT_THEGJ RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|239910619|gb|ACS33510.1| Threonyl-tRNA synthetase (thrS) [Thermococcus gammatolerans EJ3]
          Length = 626

 Score = 36.2 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 31/282 (10%), Positives = 69/282 (24%), Gaps = 44/282 (15%)

Query: 40  QFIEIDSMSLQ--YSPGNETHIRAFSTELIIQDHIRKPLYLQTSPE----FSCKKLLAAG 93
             +E+++  +     P  E ++  F     I     K  +L+ +         K  + + 
Sbjct: 254 GAMEVETPIMYDFEHPALEKYLNRFPARQYIVKSGDKKFFLRFAACFGQFLIKKDAIISY 313

Query: 94  EEKIFCFAHAWRN--------GEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAE 145
                      R            G      FTM + +   +  +Q M +     + + E
Sbjct: 314 RNLPLRMYELTRYSFRREKSGELSGLRRLRAFTMPDMHTVAKDLKQAMDEFKKQYKLSME 373

Query: 146 VANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAG 205
           V      +  +                               +  + ++  +   A+  G
Sbjct: 374 VLRGVGLTPDDYEV----------------------AIRFTHDFWEANKDFIVELAKIIG 411

Query: 206 IRVAHDDTWSDIFSRI--LIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
             V  +      F  I         NL         +     +    I   D    +R+ 
Sbjct: 412 KPVLIEMWDQRFFYFILKFEFNFVDNLDKAAALSTVQIDVENAERFGITYYDEEGKERYP 471

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPI 305
           L                        EK+ + + +     +P+
Sbjct: 472 LILHCSPSG------AIERVMYAILEKQAKLQAQGKKPMFPL 507


>gi|119190137|ref|XP_001245675.1| hypothetical protein CIMG_05116 [Coccidioides immitis RS]
          Length = 505

 Score = 36.2 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 7/26 (26%), Positives = 13/26 (50%), Gaps = 2/26 (7%)

Query: 317 PQSSGI--AMGFDRLVMLVTGANNIN 340
           P+  G    +G +R+ ML+    +I 
Sbjct: 353 PEHIGWAFGLGLERIAMLLFNIPDIR 378


>gi|300767763|ref|ZP_07077673.1| aspartate--ammonia ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308179953|ref|YP_003924081.1| aspartate--ammonia ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|300494748|gb|EFK29906.1| aspartate--ammonia ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308045444|gb|ADN97987.1| aspartate--ammonia ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 335

 Score = 36.2 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 66/259 (25%), Gaps = 35/259 (13%)

Query: 85  SCKKLLAAGEEKIFCFAHAWR-NGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCA 143
           + K+      E ++   +A R + +    H         Y     +E+++      +   
Sbjct: 90  ALKRYGFDMHEGLYTNMNAIRKDEDLDNYHS-------AYVDQWDWEKVISKEERTVETL 142

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQ 203
                Q     +++    + +            +           PD   R       ++
Sbjct: 143 KATVRQIFKVIKHMEHEVWYKFPQAVHHLPDEIHFLTTQELEDMYPDMTPRERENAICKK 202

Query: 204 AGIRVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFE 263
            G        W        ++  E + G        +                  +    
Sbjct: 203 LGCVFLMQIGW-------KLDSGERHDGRAPDYDDWKLNGDILFWYEPLDQAIEISSMG- 254

Query: 264 LYACNIELCNACDELLDPIEQRHRFEKEMQEKKKIYNETYPIDEDFLACLTEMPQSSGIA 323
                                    +K++++       + P  +  L     +P + G  
Sbjct: 255 -----------------IRVDAESMKKQLKDVDAEDRLSLPYHQMILNAD--VPYTIGGG 295

Query: 324 MGFDRLVMLVTGANNINEV 342
           +G  RL ML+ G  ++ EV
Sbjct: 296 IGQSRLCMLLLGKAHVGEV 314


>gi|254169369|ref|ZP_04876198.1| phenylalanyl-tRNA synthetase, alpha subunit, putative
           [Aciduliprofundum boonei T469]
 gi|197621688|gb|EDY34274.1| phenylalanyl-tRNA synthetase, alpha subunit, putative
           [Aciduliprofundum boonei T469]
          Length = 504

 Score = 36.2 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 7/20 (35%), Positives = 11/20 (55%)

Query: 322 IAMGFDRLVMLVTGANNINE 341
             +G +RL M+  G  +I E
Sbjct: 469 WGLGLERLAMITLGLKDIRE 488


>gi|292657056|ref|YP_003536953.1| phenylalanyl-tRNA synthetase subunit alpha [Haloferax volcanii DS2]
 gi|291371212|gb|ADE03439.1| phenylalanyl-tRNA synthetase alpha subunit [Haloferax volcanii DS2]
          Length = 499

 Score = 36.2 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 7/21 (33%), Positives = 14/21 (66%)

Query: 322 IAMGFDRLVMLVTGANNINEV 342
             +  +RL+ML+ G ++I +V
Sbjct: 462 WGLALERLLMLMYGFDDIRDV 482


>gi|42520791|ref|NP_966706.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|73919843|sp|Q73GH6|SYT_WOLPM RecName: Full=Threonyl-tRNA synthetase; AltName:
           Full=Threonine--tRNA ligase; Short=ThrRS
 gi|42410531|gb|AAS14640.1| threonyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 633

 Score = 36.2 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 68/214 (31%), Gaps = 18/214 (8%)

Query: 30  SSLREYFVENQFIEIDSMSLQYSPGNETHIRAFSTELIIQDHIRKPLYLQTSPE---FSC 86
           S +R+  + N + E+ +  L          +         D  R+ +++    E    + 
Sbjct: 276 SYIRKKLINNGYFEVKTPILVS--------KELWERSGHWDKFRENMFIVDESENKKLAI 327

Query: 87  KKLLAAGEEKIFCF-AHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMN--IIRCA 143
           K +      +IF     ++R+              E   +     ++     +   I C 
Sbjct: 328 KPMNCPCHVQIFNSHTRSYRDLPIRMAEFGTCHRNESSGSLHGLMRVRGFTQDDAHIFCM 387

Query: 144 AEVANQKIFSFQNVNCNPFSEPEYITVAEAFARYAN-IDLGTTLDNPDQPDRHLLYLQAQ 202
            E  N +   F ++    +SE   +   E   ++++  D+    D         L    +
Sbjct: 388 EEQVNSETIKFCDLLKEVYSE---LGFNEISVKFSDRPDIRAGNDEVWDRAEKALLEAVK 444

Query: 203 QAGIRVAHDDTWSDIFSRILIEKIEPNLGINCCT 236
           +AG+    +      +   L   ++  +G N   
Sbjct: 445 EAGLSYKLNPGEGAFYGPKLEFVLKDAIGRNWQC 478


>gi|317496870|ref|ZP_07955200.1| hypothetical protein HMPREF0996_00179 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316895882|gb|EFV18034.1| hypothetical protein HMPREF0996_00179 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 342

 Score = 35.8 bits (81), Expect = 9.4,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 63/212 (29%), Gaps = 30/212 (14%)

Query: 87  KKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV 146
           + +     ++I    + +R  E G           ++R      + +   +  IR     
Sbjct: 93  ESVFTMWFDEIMEHTNCYRYHEIGH----------FWRDGAEQWRQLVYMIGTIREKYRF 142

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
             +++ + Q +      E      A  +  +   +      +  +     +   A QAG 
Sbjct: 143 LGEEVCNDQEMEIMSLIEF-----APFYYYFPINEDPEEWYDKTEEGLECMRNLAMQAGD 197

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
           +      W D + +   +++E  L         +             +DP          
Sbjct: 198 K--DYLKWIDKYEKHPTKRMEMTLAKKLQDPKRQDLYELICEKVCNASDP---------- 245

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
                     E +D   QR+R + + + K++ 
Sbjct: 246 ---YPARNYGERIDQKIQRYREQVDKKLKEQG 274


>gi|68472589|ref|XP_719613.1| hypothetical protein CaO19.9587 [Candida albicans SC5314]
 gi|68472846|ref|XP_719488.1| hypothetical protein CaO19.2039 [Candida albicans SC5314]
 gi|46441307|gb|EAL00605.1| hypothetical protein CaO19.2039 [Candida albicans SC5314]
 gi|46441437|gb|EAL00734.1| hypothetical protein CaO19.9587 [Candida albicans SC5314]
 gi|238881898|gb|EEQ45536.1| phenylalanyl-tRNA synthetase, mitochondrial precursor [Candida
           albicans WO-1]
          Length = 446

 Score = 35.8 bits (81), Expect = 9.4,   Method: Composition-based stats.
 Identities = 6/19 (31%), Positives = 10/19 (52%)

Query: 322 IAMGFDRLVMLVTGANNIN 340
             +G DR+ ML+    +I 
Sbjct: 312 FGIGLDRIAMLLFNIPDIR 330


>gi|167765810|ref|ZP_02437863.1| hypothetical protein CLOSS21_00301 [Clostridium sp. SS2/1]
 gi|167712527|gb|EDS23106.1| hypothetical protein CLOSS21_00301 [Clostridium sp. SS2/1]
 gi|291559173|emb|CBL37973.1| hypothetical protein CL2_09610 [butyrate-producing bacterium SSC/2]
          Length = 342

 Score = 35.8 bits (81), Expect = 9.5,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 63/212 (29%), Gaps = 30/212 (14%)

Query: 87  KKLLAAGEEKIFCFAHAWRNGEQGCLHQPEFTMLEWYRAHESYEQLMKDCMNIIRCAAEV 146
           + +     ++I    + +R  E G           ++R      + +   +  IR     
Sbjct: 93  ESVFTMWFDEIMEHTNCYRYHEIGH----------FWRDGAEQWRQLVYMIGTIREKYRF 142

Query: 147 ANQKIFSFQNVNCNPFSEPEYITVAEAFARYANIDLGTTLDNPDQPDRHLLYLQAQQAGI 206
             +++ + Q +      E      A  +  +   +      +  +     +   A QAG 
Sbjct: 143 LGEEVCNDQEMEIMSLIEF-----APFYYYFPINEDPEEWYDKTEEGLECMRNLAMQAGD 197

Query: 207 RVAHDDTWSDIFSRILIEKIEPNLGINCCTILDRYPAPESALANIYPADPRFTKRFELYA 266
           +      W D + +   +++E  L         +             +DP          
Sbjct: 198 K--DYLKWIDKYEKHPTKRMEMTLAKKLQDPKRQDLYELICEKVCNASDP---------- 245

Query: 267 CNIELCNACDELLDPIEQRHRFEKEMQEKKKI 298
                     E +D   QR+R + + + K++ 
Sbjct: 246 ---YPARNYGERIDQKIQRYREQVDKKLKEQG 274


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.311    0.136    0.417 

Lambda     K      H
   0.267   0.0420    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,155,001,893
Number of Sequences: 14124377
Number of extensions: 194817353
Number of successful extensions: 462843
Number of sequences better than 10.0: 8828
Number of HSP's better than 10.0 without gapping: 8398
Number of HSP's successfully gapped in prelim test: 430
Number of HSP's that attempted gapping in prelim test: 428691
Number of HSP's gapped (non-prelim): 12316
length of query: 355
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 215
effective length of database: 2,865,380,850
effective search space: 616056882750
effective search space used: 616056882750
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 82 (36.2 bits)